Query 014312
Match_columns 427
No_of_seqs 188 out of 1365
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 09:19:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014312.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014312hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dwl_A Actin-related protein 3 100.0 2.7E-91 9.1E-96 695.4 21.6 416 1-426 1-426 (427)
2 3qb0_A Actin-related protein 4 100.0 6.9E-84 2.4E-88 647.4 28.7 364 5-421 22-497 (498)
3 4fo0_A Actin-related protein 8 100.0 6.4E-79 2.2E-83 636.5 24.8 401 6-424 15-592 (593)
4 1k8k_A ARP3, actin-like protei 100.0 2.1E-77 7.1E-82 599.3 32.0 414 1-427 1-418 (418)
5 2fxu_A Alpha-actin-1, actin, a 100.0 1E-76 3.6E-81 585.5 30.0 373 4-422 3-375 (375)
6 1k8k_B ARP2, actin-like protei 100.0 7.2E-78 2.4E-82 596.9 15.7 383 4-419 4-388 (394)
7 4am6_A Actin-like protein ARP8 100.0 7.9E-68 2.7E-72 533.9 22.2 400 6-424 40-654 (655)
8 1jce_A ROD shape-determining p 100.0 4.7E-35 1.6E-39 285.1 21.4 322 6-401 3-331 (344)
9 3h1q_A Ethanolamine utilizatio 99.9 2.1E-22 7.1E-27 189.2 15.4 213 87-394 59-272 (272)
10 2v7y_A Chaperone protein DNAK; 99.9 3.4E-22 1.1E-26 204.0 11.6 306 7-395 3-349 (509)
11 1dkg_D Molecular chaperone DNA 99.8 1.1E-20 3.9E-25 186.1 12.9 247 98-396 113-381 (383)
12 3qfu_A 78 kDa glucose-regulate 99.8 5.5E-20 1.9E-24 181.8 12.5 226 119-396 153-392 (394)
13 3i33_A Heat shock-related 70 k 99.8 2.3E-18 7.8E-23 170.8 13.3 226 119-396 158-400 (404)
14 1yuw_A Heat shock cognate 71 k 99.7 1.3E-15 4.6E-20 156.5 20.2 224 120-395 140-378 (554)
15 2kho_A Heat shock protein 70; 99.6 9.5E-15 3.2E-19 151.7 17.5 224 120-396 136-381 (605)
16 4gni_A Putative heat shock pro 99.5 1.2E-14 4.2E-19 144.2 10.4 228 119-397 150-401 (409)
17 3d2f_A Heat shock protein homo 99.5 1.2E-13 4E-18 144.7 16.4 223 120-395 139-381 (675)
18 2ych_A Competence protein PILM 99.5 1.4E-12 4.7E-17 127.9 18.4 177 135-349 153-331 (377)
19 2fsj_A Hypothetical protein TA 99.4 3.3E-13 1.1E-17 130.6 9.6 196 7-220 22-240 (346)
20 4b9q_A Chaperone protein DNAK; 99.4 2.4E-11 8.1E-16 126.1 19.0 204 120-348 136-357 (605)
21 4a2a_A Cell division protein F 99.3 3E-11 1E-15 119.6 15.8 182 132-349 167-353 (419)
22 4apw_A ALP12; actin-like prote 99.0 9.3E-10 3.2E-14 105.6 9.8 197 1-219 1-219 (329)
23 2zgy_A Plasmid segregation pro 99.0 2.3E-09 7.8E-14 102.5 11.5 92 144-239 136-229 (320)
24 3js6_A Uncharacterized PARM pr 98.9 3E-09 1E-13 102.9 10.3 205 8-220 6-232 (355)
25 1nbw_A Glycerol dehydratase re 98.0 1.3E-05 4.5E-10 79.5 8.8 79 155-244 392-470 (607)
26 2d0o_A DIOL dehydratase-reacti 98.0 4E-05 1.4E-09 75.9 12.1 79 155-244 390-468 (610)
27 1t6c_A Exopolyphosphatase; alp 95.3 0.051 1.7E-06 51.1 8.6 80 131-213 95-177 (315)
28 3cer_A Possible exopolyphospha 95.3 0.043 1.5E-06 52.3 8.2 80 133-213 102-191 (343)
29 3mdq_A Exopolyphosphatase; str 95.2 0.075 2.6E-06 49.9 9.4 78 133-213 89-170 (315)
30 1u6z_A Exopolyphosphatase; alp 94.3 0.24 8.2E-06 49.8 10.9 78 133-213 96-176 (513)
31 3hi0_A Putative exopolyphospha 92.7 0.64 2.2E-05 46.6 11.0 77 132-212 99-178 (508)
32 4ehu_A Activator of 2-hydroxyi 91.1 0.049 1.7E-06 50.0 0.6 51 321-395 203-253 (276)
33 4db3_A Glcnac kinase, N-acetyl 89.4 4.7 0.00016 37.6 12.9 58 138-197 112-171 (327)
34 3cet_A Conserved archaeal prot 88.0 0.4 1.4E-05 44.8 4.2 25 172-196 127-151 (334)
35 3r8e_A Hypothetical sugar kina 87.1 3.5 0.00012 38.3 10.3 57 139-197 110-169 (321)
36 3aap_A Ectonucleoside triphosp 86.8 2.4 8.2E-05 40.2 9.0 106 98-207 52-177 (353)
37 2gup_A ROK family protein; sug 86.8 4.4 0.00015 36.9 10.7 58 137-197 86-143 (292)
38 2h3g_X Biosynthetic protein; p 80.3 9.9 0.00034 34.4 9.9 18 9-26 3-20 (268)
39 2ews_A Pantothenate kinase; PA 79.6 0.64 2.2E-05 42.8 1.6 48 326-394 238-286 (287)
40 3bex_A Type III pantothenate k 79.3 22 0.00074 31.7 11.7 19 8-26 5-23 (249)
41 3vgl_A Glucokinase; ROK family 78.8 19 0.00066 33.1 11.7 58 138-197 88-147 (321)
42 3djc_A Type III pantothenate k 78.3 18 0.00063 32.5 11.0 19 8-26 4-22 (266)
43 2qm1_A Glucokinase; alpha-beta 65.8 22 0.00074 32.6 8.7 56 138-196 100-158 (326)
44 1hux_A Activator of (R)-2-hydr 57.5 1.8 6E-05 39.4 -0.6 46 326-395 210-255 (270)
45 2i7n_A Pantothenate kinase 1; 49.8 5.2 0.00018 37.9 1.2 73 304-394 284-358 (360)
46 1zbs_A Hypothetical protein PG 48.4 1.5E+02 0.0051 26.5 11.9 70 121-195 62-132 (291)
47 1zc6_A Probable N-acetylglucos 36.1 2.4E+02 0.0081 25.2 11.6 88 98-195 53-145 (305)
48 1hux_A Activator of (R)-2-hydr 33.0 2.1E+02 0.0072 25.3 9.3 24 172-195 96-119 (270)
49 2ch5_A NAGK protein; transfera 32.3 2.9E+02 0.0098 25.1 12.9 88 98-193 49-142 (347)
50 2f9w_A Pantothenate kinase; CO 30.6 2E+02 0.0068 25.7 8.5 17 8-24 25-41 (271)
51 2aa4_A Mannac kinase, putative 30.1 11 0.00037 34.1 -0.0 56 138-197 88-146 (289)
52 4htl_A Beta-glucoside kinase; 26.5 15 0.00052 33.5 0.3 58 138-197 89-148 (297)
53 3qbx_A Anhydro-N-acetylmuramic 26.2 29 0.001 32.8 2.2 23 326-348 285-307 (371)
54 1saz_A Probable butyrate kinas 26.2 28 0.00095 33.1 2.1 75 326-420 297-377 (381)
55 3eno_A Putative O-sialoglycopr 26.1 48 0.0016 30.8 3.7 26 325-350 250-275 (334)
56 2hoe_A N-acetylglucosamine kin 24.9 32 0.0011 32.5 2.3 58 138-197 180-237 (380)
57 3vov_A Glucokinase, hexokinase 23.6 23 0.0008 32.3 1.0 58 138-197 90-149 (302)
58 2qm1_A Glucokinase; alpha-beta 23.5 17 0.0006 33.3 0.1 24 3-26 3-26 (326)
59 2jsh_A Appetite-regulating hor 23.4 19 0.00067 19.7 0.2 14 402-415 9-22 (26)
60 2ivn_A O-sialoglycoprotein end 23.2 46 0.0016 30.8 3.0 26 325-350 245-270 (330)
61 2e2o_A Hexokinase; acetate and 22.6 4E+02 0.014 23.5 11.8 62 121-193 62-123 (299)
62 3cqy_A Anhydro-N-acetylmuramic 21.5 37 0.0013 32.1 1.9 23 326-348 291-313 (370)
No 1
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.7e-91 Score=695.37 Aligned_cols=416 Identities=57% Similarity=1.002 Sum_probs=329.7
Q ss_pred CCCCCCCcEEEeCCCccEEEEEcCCCCCceeeeeeEEeecccccc-ccccchhhhhh------hhccCCCCCCCeEEccc
Q 014312 1 MDPTSRPAVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQ-SRSSSKANWLA------QYNAGVMADLDFFIGDE 73 (427)
Q Consensus 1 ~~~~~~~~vVlD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~-~~~~~~~~~~~------~~~~~~~~~~~~~vg~~ 73 (427)
|+ +..++||||+||+++|+||||++.|++++||++|+++..... ...+++++|.. ...+.+...++++||++
T Consensus 1 m~-~~~~~iViDnGs~~~KaG~ag~~~P~~v~Ps~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~e 79 (427)
T 3dwl_A 1 MA-SFNVPIIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIGND 79 (427)
T ss_dssp ---CCCSCEEECCCSSBC-CEETTSSSCSCCCBCCEECC------------------------------CCSSCCEETHH
T ss_pred CC-CCCCeEEEECCCCeEEEEECCCCCCCCcCCceEEeecccccccccccccccccccccccccccccCcccCCeEEchH
Confidence 77 789999999999999999999999999999999998643110 00111222211 01122445678999999
Q ss_pred cccccCCCCCcEEeCcccCCccCCHHHHHHHHHHHHhhccCCCCCCceeEEEeCCCCCHHHHHHHHHHhhhccCCCeEEE
Q 014312 74 AVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETFNVPGLYI 153 (427)
Q Consensus 74 ~~~~~~~~~~~~~~~Pi~~G~i~d~~~~e~i~~~~l~~~L~~~~~~~~vll~e~~~~~~~~r~~l~e~lfe~~~~~~v~~ 153 (427)
|...... .+.+++|+++|.|.|||++|++|+|+|++.|++++++||+||+||+++++..|++++|++||.|++|++|+
T Consensus 80 a~~~~~~--~l~~~~Pi~~GvI~dwd~~e~iw~~~~~~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l 157 (427)
T 3dwl_A 80 ALKKASA--GYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYI 157 (427)
T ss_dssp HHHTHHH--HCCCCCSEETTEECCHHHHHHHHHHHHHTTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEE
T ss_pred HhhCccc--CcEEecCcccCeeccHHHHHHHHHHHHhHhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeee
Confidence 9987742 48999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred echhhhhhhhccCCC---CCcceEEEEEcCCCceEEEEeecceecccCceEeccchHHHHHHHHHHHHhcCCCCCCcchH
Q 014312 154 AVNSVLALAAGYTTS---KCEMTGVVVDVGDGATYVVPVAEGYVIGSSIKSIPIAGKDVTLFIQQLMRERGENVPPEDSF 230 (427)
Q Consensus 154 ~~~~~lal~~~g~~~---~~~~tglVVDiG~~~t~v~pV~dG~~l~~~~~~~~~gG~~l~~~l~~~l~~~~~~~~~~~~~ 230 (427)
+.+++||+|++|+.. .+.+||+|||+|++.|+|+||++|++++++++++++||+++|++|.++|+.++.. ..+.
T Consensus 158 ~~~~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~---~~~~ 234 (427)
T 3dwl_A 158 AVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEP---DSSL 234 (427)
T ss_dssp EEHHHHHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHTTC-----------C
T ss_pred cchHHHHHHhcCCcccccCCCceEEEEECCCCceEEEEEECCEEehhhheeccccHHHHHHHHHHHHHHcCCC---chhH
Confidence 999999999998421 0147999999999999999999999999999999999999999999999988775 3566
Q ss_pred HHHHHhhhhcCcccccHHHHHhhccCCCccccceeeccCCCCCCceEEeecceeeecccccccCCCCCCCCCCChHHHHH
Q 014312 231 EVARKVKEMYCYTCSDIVKEYNKHDKEPSKYLKQWRGIKPKTGAPYSCDIGYERFLGPEVFFNPEIYSSDFTTPLPAVID 310 (427)
Q Consensus 231 ~~~~~iKe~~c~v~~d~~~e~~~~~~~~~~~~~~~~~~~~~~g~~~~i~i~~er~~~~E~LF~P~~~~~~~~~~l~~~i~ 310 (427)
+++++|||++|||+.|+.+|++.+...+. ....|.+. +.+|+++.++++.|||++||+||+|++++.+...+|+++|.
T Consensus 235 ~~~~~IKe~~cyv~~d~~~e~~~~~~~~~-~~~~~~l~-~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~ 312 (427)
T 3dwl_A 235 KTAERIKEECCYVCPDIVKEFSRFDREPD-RYLKYASE-SITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVD 312 (427)
T ss_dssp HHHHHHHHHHCCCCSCHHHHHHHTTC------CCBCC----------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHH
T ss_pred HHHHHHHHhcCcccCCHHHHHHHhhcCcc-ccceeEee-CCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHH
Confidence 89999999999999999999887665442 35667761 12388789999999999999999999998874479999999
Q ss_pred HHHHhCChhhHHHhhcCeEEecCccCcccHHHHHHHHHHHHHHHhhhhhhcccCCccCCCCeeEEEecCCCccceeeecc
Q 014312 311 KCIQSAPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASDARLGGEVKAQPVEVNVVSHAIQRYAVWFGG 390 (427)
Q Consensus 311 ~~i~~~~~d~r~~l~~nIil~GG~s~i~G~~eRL~~eL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~W~Gg 390 (427)
++|++||+|+|+.|++||||+||+|++|||.+||++||+.+++.++.......|. +|..++++|.++++|+|++|+||
T Consensus 313 ~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~--~p~~~~vkv~~~~~r~~s~WiGG 390 (427)
T 3dwl_A 313 NVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGA--KSGGVDVNVISHKRQRNAVWFGG 390 (427)
T ss_dssp HHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC---------------CCCCCEECCTTCTTHHHHHH
T ss_pred HHHHhCCHHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhcccccccccc--CCCceeEEEecCCccccceecCc
Confidence 9999999999999999999999999999999999999999986544332222211 25567899999999999999999
Q ss_pred eeecccccccccccchHHHhhcCcceeeecCCCCCC
Q 014312 391 SVLASTPEFFAACHTKAEYEEYGASICRSNPVFKGM 426 (427)
Q Consensus 391 silasl~~f~~~~itk~eY~e~G~~~~~~~~~~~~~ 426 (427)
||||+|++|+++||||+||+|+|++|||||++|+++
T Consensus 391 Silasl~~f~~~witk~EYeE~G~~iv~~~~~~~~~ 426 (427)
T 3dwl_A 391 SLLAQTPEFGSYCHTKADYEEYGASIARRYQIFGNS 426 (427)
T ss_dssp HHHHHSTTHHHHSEEHHHHHHSCGGGGSCCCC----
T ss_pred eeeccccchhheeEEHHHHhhhChHhheecccccCC
Confidence 999999999999999999999999999999999986
No 2
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-84 Score=647.39 Aligned_cols=364 Identities=25% Similarity=0.371 Sum_probs=320.8
Q ss_pred CCCcEEEeCCCccEEEEEcCCCCCceeeeeeEEeeccccccccccchhhhhhhhccCCCCCCCeEEccccccccCCCCCc
Q 014312 5 SRPAVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADLDFFIGDEAVTKSRSSSTY 84 (427)
Q Consensus 5 ~~~~vVlD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~~ 84 (427)
+.++||||+||+++||||+|++.|++++||++++++.. ..++.++|+++...... .+
T Consensus 22 e~~~iVID~GS~~~kaG~ag~~~P~~v~PSvVg~~~~~---------------------~~~~~~vG~e~~~~~r~--~l 78 (498)
T 3qb0_A 22 EVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTAD---------------------EGNKKIFSEQSIGIPRK--DY 78 (498)
T ss_dssp CBSCEEEECCSSEEEEEETTCSSCSEEEESEEEEESSC---------------------SSCCEECCTTGGGSCCT--TE
T ss_pred CCCeEEEECCCcEEEEEECCCCCeeeecCceeEEeccC---------------------CCccEEEecHHHhcCcC--ce
Confidence 45799999999999999999999999999999998531 13567999974333332 59
Q ss_pred EEeCcccCCccCCHHHHHHHHHHHHhhccCCCCCCc-eeEEEeCCCCCHHHHHHHHHHhhhccCCCeEEEechhhhhhhh
Q 014312 85 NLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPEDH-YFLLTESPLTAPESREYTGEIMFETFNVPGLYIAVNSVLALAA 163 (427)
Q Consensus 85 ~~~~Pi~~G~i~d~~~~e~i~~~~l~~~L~~~~~~~-~vll~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~lal~~ 163 (427)
.+++|+++|.|.|||++|.+|+|+|.+.|++++.++ ||||++|+++++..|++++|+|||.|++|++|++.+++||+|+
T Consensus 79 ~l~~Pi~~GvI~dwd~~E~iw~~~f~~~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~~vlalya 158 (498)
T 3qb0_A 79 ELKPIIENGLVIDWDTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFA 158 (498)
T ss_dssp EEEESEETTEESCHHHHHHHHHHHHHHTSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHH
T ss_pred EEeccCcCCEEccHHHHHHHHHHHHHhhhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecchHHHHHHH
Confidence 999999999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred ccCCCCCcceEEEEEcCCCceEEEEeecceecccCceEeccchHHHHHHHHHHHHhcC------------------CCCC
Q 014312 164 GYTTSKCEMTGVVVDVGDGATYVVPVAEGYVIGSSIKSIPIAGKDVTLFIQQLMRERG------------------ENVP 225 (427)
Q Consensus 164 ~g~~~~~~~tglVVDiG~~~t~v~pV~dG~~l~~~~~~~~~gG~~l~~~l~~~l~~~~------------------~~~~ 225 (427)
+| .+||||||+|++.|+|+||++|++++++++++++||+++|++|.++|++++ +.+.
T Consensus 159 ~G-----~~tglVVDiG~g~T~vvPI~~G~~l~~ai~rl~vgG~~lt~~L~~lL~~~~i~P~~~i~~k~~~~~~~~~~~~ 233 (498)
T 3qb0_A 159 AG-----RPNCLVVDIGHDTCSVSPIVDGMTLSKSTRRNFIAGKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYE 233 (498)
T ss_dssp HT-----CSSEEEEEECSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHTTTSCCCCSTTEEECSSSCEECCCSSC
T ss_pred cC-----CCeEEEEEcCCCcEEEEEEeCCEEccccceeccccHHHHHHHHHHHHHhccccchhhhcccccccccccCCCc
Confidence 99 779999999999999999999999999999999999999999999998753 2222
Q ss_pred Ccc-------hHHHHHHhhhhcCccccc--HHHHHhhccCCCccccceeeccCCCCCCceEEeecce-eeecccccccCC
Q 014312 226 PED-------SFEVARKVKEMYCYTCSD--IVKEYNKHDKEPSKYLKQWRGIKPKTGAPYSCDIGYE-RFLGPEVFFNPE 295 (427)
Q Consensus 226 ~~~-------~~~~~~~iKe~~c~v~~d--~~~e~~~~~~~~~~~~~~~~~~~~~~g~~~~i~i~~e-r~~~~E~LF~P~ 295 (427)
... +.++++++||++|||+.+ +.++...... .....|++|| |+ .|.++.| ||++||+||+|+
T Consensus 234 ~~~s~~~~~~~~~iv~~iKE~~c~Va~~~~~~~~~~~~~~---~~~~~yeLPD---G~--~i~lg~E~Rf~~pE~LF~P~ 305 (498)
T 3qb0_A 234 VDKSLYDYANNRGFFQECKETLCHICPTKTLEETKTELSS---TAKRSIESPW---NE--EIVFDNETRYGFAEELFLPK 305 (498)
T ss_dssp CCHHHHHHHHHHTHHHHHHHHTCCCCSSCHHHHHHHHHHT---CCCEEEECSS---SC--EEEECHHHHHHHHHTTTSCC
T ss_pred cCccHHHHHHHHHHHHHHHHhhEEecCCccHhHHhhhccC---cCceEEECCC---CC--EEEECchHhhhCchhhCCHh
Confidence 111 345899999999999987 5544221111 2356899988 87 9999999 999999999998
Q ss_pred CCCC----------------------------------------------------------------------------
Q 014312 296 IYSS---------------------------------------------------------------------------- 299 (427)
Q Consensus 296 ~~~~---------------------------------------------------------------------------- 299 (427)
+++.
T Consensus 306 ~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (498)
T 3qb0_A 306 EDDIPANWPRSNSGVVKTWRNDYVPLKRTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSADTPNETGKRPLEEEKPP 385 (498)
T ss_dssp GGGSCTTSCCCSSSCCCCCSCCCCCCCBCC--------------------------------------------------
T ss_pred HcCCcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 7643
Q ss_pred ---CCCCChHHHHHHHHHhCChhhHHHhhcCeEEecCccCcccHHHHHHHHHHHHHHHhhhhhhcccCCccCCCCeeEEE
Q 014312 300 ---DFTTPLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASDARLGGEVKAQPVEVNV 376 (427)
Q Consensus 300 ---~~~~~l~~~i~~~i~~~~~d~r~~l~~nIil~GG~s~i~G~~eRL~~eL~~~~~~~~~~~~~~~~~~~~~~~~~v~v 376 (427)
....||+++|.++|++||+|+|+.|++||||+||+|++|||.+||++||+.++ | ..+++|
T Consensus 386 ~~~~~~~Gi~e~i~~sI~~cd~d~r~~L~~nIvLsGGst~~pGf~~Rl~~El~~l~----------------p-~~~i~v 448 (498)
T 3qb0_A 386 KENNELIGLADLVYSSIMSSDVDLRATLAHNVVLTGGTSSIPGLSDRLMTELNKIL----------------P-SLKFRI 448 (498)
T ss_dssp ---CCSCCHHHHHHHHHHTSCTTTHHHHHTTEEEESGGGGSTTHHHHHHHHHHHHS----------------T-TSCCCE
T ss_pred cccccCCCchHHHHHHHHhCCHHHHHHHhcCEEEeCCccCchhHHHHHHHHHHHhC----------------C-CCeeEE
Confidence 02468999999999999999999999999999999999999999999999986 3 457888
Q ss_pred ecC---CCccceeeecceeecccccccccccchHHHhhcCc-ceeeecC
Q 014312 377 VSH---AIQRYAVWFGGSVLASTPEFFAACHTKAEYEEYGA-SICRSNP 421 (427)
Q Consensus 377 ~~~---~~~~~~~W~Ggsilasl~~f~~~~itk~eY~e~G~-~~~~~~~ 421 (427)
+++ ++|++++|+||||||+|++|+++||||+||+|+|+ .||+|||
T Consensus 449 ~~~~~~~er~~s~WiGgsilasl~~f~~~witk~EY~E~G~~~iv~~kc 497 (498)
T 3qb0_A 449 LTTGHTIERQYQSWLGGSILTSLGTFHQLWVGKKEYEEVGVERLLNDRF 497 (498)
T ss_dssp ECCSCTGGGGSHHHHHHHHHHTCHHHHHTSEEHHHHHTTCCHHHHHHTT
T ss_pred EcCCCCCccCccEEcccEEEecCcchhceEEEHHHHhhhCcHhhccccC
Confidence 877 68999999999999999999999999999999999 8999996
No 3
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.4e-79 Score=636.45 Aligned_cols=401 Identities=21% Similarity=0.295 Sum_probs=301.0
Q ss_pred CCcEEEeCCCccEEEEEcCCCCCceeeeeeEEeecccccccccc-------------ch---------------------
Q 014312 6 RPAVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSS-------------SK--------------------- 51 (427)
Q Consensus 6 ~~~vVlD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~~~~-------------~~--------------------- 51 (427)
+.+||||+||+++|+|||||+.|+ .+|++||++.......... ..
T Consensus 15 ~~iIVIdpGS~~~riG~A~d~~P~-~iP~~iar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (593)
T 4fo0_A 15 NFIIVIHPGSTTLRIGRATDTLPA-SIPHVIARRHKQQGQPLYKDSWLLREGLNKPESNEQRQNGLKMVDQAIWSKKMSN 93 (593)
T ss_dssp GGEEEEECCSSEEEEEETTCSSCE-EEECCEEEECSSTTCCCCBCCSSCCTTTTSTTHHHHHHHHHHHHHHHHHHSCCTT
T ss_pred CCEEEEeCCCCCeEeeecCCCCCC-eeeEEEEEECCCCCCCcccccccccccccccchhhhhhhhHHHHHHHHHHHhhhc
Confidence 458999999999999999999997 5799999985432211000 00
Q ss_pred ------------hhhhhh------------hccCCCCCCCeEEccccccccCCCCCcEEeCcccCC-----------ccC
Q 014312 52 ------------ANWLAQ------------YNAGVMADLDFFIGDEAVTKSRSSSTYNLSYPIRHG-----------QVD 96 (427)
Q Consensus 52 ------------~~~~~~------------~~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~Pi~~G-----------~i~ 96 (427)
.+|+.. .........+++||++|+..... +.+.++|||++| .+.
T Consensus 94 ~~r~~~~s~~~~~~~n~~~~p~~i~~~~~~~~~~~~~~~~~~vG~~al~~~~~-~~~~l~~Pi~~G~~n~~~~~~~s~~~ 172 (593)
T 4fo0_A 94 GTRRIPVSPEQARSYNKQMRPAILDHCSGNKWTNTSHHPEYLVGEEALYVNPL-DCYNIHWPIRRGQLNIHPGPGGSLTA 172 (593)
T ss_dssp SCCCCCCCHHHHHHHHTTCCCEEEESSCSCCCCCCTTCCSEEETHHHHTSCTT-SSEEEECSEETTEECCCSSTTCSHHH
T ss_pred ccccCCCcHHHhhhhhccCCCcccCCCCccccccccccccccccHHHhhcCCc-ccceEecCcccCccccccCCccchhc
Confidence 000000 00011234679999999876433 269999999999 477
Q ss_pred CHHHHHHHHHHHHhhccCCCCCC---ceeEEEeCCCCCHHHHHHHHHHhhhccCCCeEEEechhhhhhhhccCCCCCcce
Q 014312 97 NWDAMERYWQQCIFNYLRCDPED---HYFLLTESPLTAPESREYTGEIMFETFNVPGLYIAVNSVLALAAGYTTSKCEMT 173 (427)
Q Consensus 97 d~~~~e~i~~~~l~~~L~~~~~~---~~vll~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~lal~~~g~~~~~~~t 173 (427)
|||+||.||+|+|+++|++++++ |||||+||+++++..|++|+|+|||+|+||++|++++++||+||+| .+|
T Consensus 173 ~wdd~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G-----~~t 247 (593)
T 4fo0_A 173 VLADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSG-----LSS 247 (593)
T ss_dssp HHHHHHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHT-----CSE
T ss_pred CHHHHHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCC-----CCc
Confidence 99999999999999999998875 9999999999999999999999999999999999999999999999 789
Q ss_pred EEEEEcCCCceEEEEeecceecccCceEeccchHHHHHHHHHHHHhcCCCCC-----CcchHHHHHHhhhhcCcccccHH
Q 014312 174 GVVVDVGDGATYVVPVAEGYVIGSSIKSIPIAGKDVTLFIQQLMRERGENVP-----PEDSFEVARKVKEMYCYTCSDIV 248 (427)
Q Consensus 174 glVVDiG~~~t~v~pV~dG~~l~~~~~~~~~gG~~l~~~l~~~l~~~~~~~~-----~~~~~~~~~~iKe~~c~v~~d~~ 248 (427)
|||||+|++.|+|+||+||+++.++++++++||++||++|.++|..+++.+. ...+++++++|||++||++.|+.
T Consensus 248 glVVDiG~~~T~v~PV~dG~~l~~~~~rl~~GG~~lt~~L~~lL~~~~~~~~~~~~~~~~d~~~v~~iKe~~c~v~~d~~ 327 (593)
T 4fo0_A 248 TCIVDVGDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCFYWLMQRAGFPYRECQLTNKMDCLLLQHLKETFCHLDQDIS 327 (593)
T ss_dssp EEEEEECSSCEEEEEEESSCBCGGGCEEESCCHHHHHHHHHHHHHHTTCSCTTCCTTCHHHHHHHHHHHHHHCBCCTTCC
T ss_pred eEEEEeCCCceeeeeeECCEEehhheEEecccHHHHHHHHHHHHHhcCCCccccccccchhHHHHHHHHHHhcccccchH
Confidence 9999999999999999999999999999999999999999999999987543 23477899999999999998754
Q ss_pred HHHhh--ccCCCccccceeec---------------------c-------------CCC---------------------
Q 014312 249 KEYNK--HDKEPSKYLKQWRG---------------------I-------------KPK--------------------- 271 (427)
Q Consensus 249 ~e~~~--~~~~~~~~~~~~~~---------------------~-------------~~~--------------------- 271 (427)
.+... ..+.|......|.. . +|.
T Consensus 328 ~~~~~~~~~~~p~~~~~~~~~~~~~E~~~~p~~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (593)
T 4fo0_A 328 GLQDHEFQIRHPDSPALLYQFRLGDEKLQAPMALFYPATFGIVGQKMTTLQHRSQGDPEDPHDEHYLLATQSKQEQSAKA 407 (593)
T ss_dssp SCEEEEEEECCTTSCEEEEEEEECTHHHHHHHTTTSGGGGCCCSSCCEEECC----------------------------
T ss_pred HhhhhhhhcccCCCCceeeEEeccchhhcCchhhcChhhhcccccccchhhhhcccCcccchhhhhhhhcccchhhhhhc
Confidence 33211 01111110000000 0 000
Q ss_pred --------CCCceEEeecceeeecccccccCCCCCCC-------------------------------CCCChHHHHHHH
Q 014312 272 --------TGAPYSCDIGYERFLGPEVFFNPEIYSSD-------------------------------FTTPLPAVIDKC 312 (427)
Q Consensus 272 --------~g~~~~i~i~~er~~~~E~LF~P~~~~~~-------------------------------~~~~l~~~i~~~ 312 (427)
....+.+.++.+|+.+||.||+|...... ...||+++|.+|
T Consensus 408 ~~~~~~~~~p~g~~~~~~~e~~~~pe~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gL~~aI~~S 487 (593)
T 4fo0_A 408 TADRKSASKPIGFEGDLRGQSSDLPERLHSQEVDLGSAQGDGLMAGNDSEEALTALMSRKTAISLFEGKALGLDKAILHS 487 (593)
T ss_dssp ---------------------------------------------------------------CHHHHSCCCHHHHHHHH
T ss_pred ccccccccCCCCcccccccccccCchhccCcccccccccccccccccccccccccccccccccccccccCCCHHHHHHHH
Confidence 00012566788899999999998642110 135899999999
Q ss_pred HHhCC-hhhHHHhhcCeEEecCccCcccHHHHHHHHHHHHHHHhhhhhhcccCCccCCCCeeEEEecCC---Cccceeee
Q 014312 313 IQSAP-IDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASDARLGGEVKAQPVEVNVVSHA---IQRYAVWF 388 (427)
Q Consensus 313 i~~~~-~d~r~~l~~nIil~GG~s~i~G~~eRL~~eL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~---~~~~~~W~ 388 (427)
|.+|| +|+|+.|++|||||||+|++|||.+||++||+.++|...+.. ..+++|++++ +|++++|+
T Consensus 488 I~~~~~~D~r~~L~~NIvltGG~s~~pGf~~RL~~eL~~~~p~~~~~~-----------~~~v~v~~~p~~~d~~~~aW~ 556 (593)
T 4fo0_A 488 IDCCSSDDTKKKMYSSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRI-----------IENVDVITRPKDMDPRLIAWK 556 (593)
T ss_dssp HHTCSSHHHHHHHHHEEEEESSTTCCBTHHHHHHHHHHHHSCHHHHHH-----------SSCCEEESSGGGCCTTTHHHH
T ss_pred HHhCCcHHHHHHHhCCEEEEchhhchhcHHHHHHHHHHHhCcchhccc-----------cceEEEECCCCCCCCceeeeh
Confidence 99998 699999999999999999999999999999999886543211 2257888766 78999999
Q ss_pred cceeecccccccccccchHHHhhcCcceeeecCCCC
Q 014312 389 GGSVLASTPEFFAACHTKAEYEEYGASICRSNPVFK 424 (427)
Q Consensus 389 Ggsilasl~~f~~~~itk~eY~e~G~~~~~~~~~~~ 424 (427)
||||||+|++|+++||||+||+|+|++||+|||+|.
T Consensus 557 GgSilasL~~f~~~wItk~EYeE~G~~il~~kc~f~ 592 (593)
T 4fo0_A 557 GGAVLACLDTTQELWIYQREWQRFGVRMLRERAAFV 592 (593)
T ss_dssp HHHHHHHCGGGGGTCEEHHHHHHHTTHHHHHHCSSC
T ss_pred hhHHHhcCccHHHeeECHHHHHhhCcHHHhhcCCcC
Confidence 999999999999999999999999999999999994
No 4
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=100.00 E-value=2.1e-77 Score=599.34 Aligned_cols=414 Identities=60% Similarity=1.048 Sum_probs=349.4
Q ss_pred CCCCCCCcEEEeCCCccEEEEEcCCCCCceeeeeeEEeeccccccccccchhhhhhhhccCCCCCCCeEEccccccccCC
Q 014312 1 MDPTSRPAVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADLDFFIGDEAVTKSRS 80 (427)
Q Consensus 1 ~~~~~~~~vVlD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~ 80 (427)
|+ +..++||||+||+++|+||+|++.|++++||+++++........ . ......+....+++||++|...+
T Consensus 1 m~-~~~~~ivID~Gs~~~k~G~~~~~~p~~~~Ps~v~~~~~~~~~~~---~----~~~~~~~~~~~~~~vG~~a~~~~-- 70 (418)
T 1k8k_A 1 MA-GRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQ---A----QRRVMKGVDDLDFFIGDEAIEKP-- 70 (418)
T ss_dssp ---CCSCCEEEEECSSEEEEEETTCSSCSEEEESCEEECC------------------CCCTTGGGCEEEGGGGTSCT--
T ss_pred CC-CCCCeEEEECCCCeEEEeeCCCCCCCCcCCceEEEECccccccc---c----cccccccccccCeEEChHHHhcC--
Confidence 88 88899999999999999999999999999999999853210000 0 00001112234689999998874
Q ss_pred CCCcEEeCcccCCccCCHHHHHHHHHHHHhhccCCCCCCceeEEEeCCCCCHHHHHHHHHHhhhccCCCeEEEechhhhh
Q 014312 81 SSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETFNVPGLYIAVNSVLA 160 (427)
Q Consensus 81 ~~~~~~~~Pi~~G~i~d~~~~e~i~~~~l~~~L~~~~~~~~vll~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~la 160 (427)
++.+++|+++|.|.|||.++.+|+|+|.+.|+++++++++++++|++++...|+++.+++||.+|++++++++++++|
T Consensus 71 --~~~~~~pi~~G~i~d~d~~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa 148 (418)
T 1k8k_A 71 --TYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLA 148 (418)
T ss_dssp --TSEEECCEETTEESCHHHHHHHHHHHHHTTTCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHH
T ss_pred --CCEEeccccCCEECCHHHHHHHHHHHHHhccCCCCCCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHH
Confidence 389999999999999999999999999889999999999999999999999999999999999999999999999999
Q ss_pred hhhc----cCCCCCcceEEEEEcCCCceEEEEeecceecccCceEeccchHHHHHHHHHHHHhcCCCCCCcchHHHHHHh
Q 014312 161 LAAG----YTTSKCEMTGVVVDVGDGATYVVPVAEGYVIGSSIKSIPIAGKDVTLFIQQLMRERGENVPPEDSFEVARKV 236 (427)
Q Consensus 161 l~~~----g~~~~~~~tglVVDiG~~~t~v~pV~dG~~l~~~~~~~~~gG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~i 236 (427)
+|++ +....+. +|+|||+|++.|+|+||++|+++.+++.++++||+++|++|.++|.+++..+....+.+.++++
T Consensus 149 ~~a~~~~~~~~~~~~-~glVvDiG~gtt~v~~v~~G~~~~~~~~~~~lGG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~i 227 (418)
T 1k8k_A 149 LAASWTSRQVGERTL-TGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAV 227 (418)
T ss_dssp HHHGGGSTTCCSCCC-CEEEEEESSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHHHTTCCCCCGGGHHHHHHHH
T ss_pred hhhhhcccccCCCCC-eEEEEEcCCCceEEEEeECCEEcccceEEEeCcHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHH
Confidence 9983 1100025 8999999999999999999999999999999999999999999999988877666678899999
Q ss_pred hhhcCcccccHHHHHhhccCCCccccceeeccCCCCCCceEEeecceeeecccccccCCCCCCCCCCChHHHHHHHHHhC
Q 014312 237 KEMYCYTCSDIVKEYNKHDKEPSKYLKQWRGIKPKTGAPYSCDIGYERFLGPEVFFNPEIYSSDFTTPLPAVIDKCIQSA 316 (427)
Q Consensus 237 Ke~~c~v~~d~~~e~~~~~~~~~~~~~~~~~~~~~~g~~~~i~i~~er~~~~E~LF~P~~~~~~~~~~l~~~i~~~i~~~ 316 (427)
|+++||++.++.++++++...+......|.+|+..++.++.+.++.|||.+||+||+|++++.+...+|+++|.++|++|
T Consensus 228 K~~~~~v~~~~~~e~~~~~~~~~~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~ 307 (418)
T 1k8k_A 228 KERYSYVCPDLVKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNC 307 (418)
T ss_dssp HHHHCCCCSCHHHHHHHHHHSGGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHS
T ss_pred HHhhchhcccHHHHHHhhcccccccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcC
Confidence 99999999998888765543332334578888866667778999999999999999999888764468999999999999
Q ss_pred ChhhHHHhhcCeEEecCccCcccHHHHHHHHHHHHHHHhhhhhhcccCCccCCCCeeEEEecCCCccceeeecceeeccc
Q 014312 317 PIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASDARLGGEVKAQPVEVNVVSHAIQRYAVWFGGSVLAST 396 (427)
Q Consensus 317 ~~d~r~~l~~nIil~GG~s~i~G~~eRL~~eL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~W~Ggsilasl 396 (427)
|+|+|+.+++||+|+||+|++|||.+||++||..+++.+...+....|+...|...+++|..+++|++++|+||||+|++
T Consensus 308 ~~~~~~~l~~~IvL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 308 PIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp CGGGTTHHHHCEEEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred CHHHHHHHHhceEEeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 99999999999999999999999999999999998876554443333332235667788999899999999999999999
Q ss_pred ccccccccchHHHhhcCcceeeecCCCCCCC
Q 014312 397 PEFFAACHTKAEYEEYGASICRSNPVFKGMY 427 (427)
Q Consensus 397 ~~f~~~~itk~eY~e~G~~~~~~~~~~~~~~ 427 (427)
++|+++||||+||+|+|+++++||++|+.++
T Consensus 388 ~~f~~~~itk~ey~e~G~~~~~~~~~f~~~~ 418 (418)
T 1k8k_A 388 PEFYQVCHTKKDYEEIGPSICRHNPVFGVMS 418 (418)
T ss_dssp HHHHHHSEEHHHHHHHCGGGGGCCCCCSCC-
T ss_pred ccHhheEEEHHHHhhhCHHHHhhhccccCCC
Confidence 9999999999999999999999999998753
No 5
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=100.00 E-value=1e-76 Score=585.51 Aligned_cols=373 Identities=36% Similarity=0.644 Sum_probs=329.6
Q ss_pred CCCCcEEEeCCCccEEEEEcCCCCCceeeeeeEEeeccccccccccchhhhhhhhccCCCCCCCeEEccccccccCCCCC
Q 014312 4 TSRPAVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADLDFFIGDEAVTKSRSSST 83 (427)
Q Consensus 4 ~~~~~vVlD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~ 83 (427)
.+.++||||+||+++|+||+|++.|++++||++++++... ...+...+++++|++|...+. .
T Consensus 3 ~~~~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~---------------~~~~~~~~~~~vG~~a~~~~~---~ 64 (375)
T 2fxu_A 3 DETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQG---------------VMVGMGQKDSYVGDEAQSKRG---I 64 (375)
T ss_dssp -CCCCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTT---------------C-------CCEEHHHHHHHTT---S
T ss_pred CCCceEEEECCCCeEEEEECCCCCCceeeccccccccccc---------------cccCCCCCCeEechhHhhcCc---c
Confidence 3567999999999999999999999999999999985321 011122457899999988765 4
Q ss_pred cEEeCcccCCccCCHHHHHHHHHHHHhhccCCCCCCceeEEEeCCCCCHHHHHHHHHHhhhccCCCeEEEechhhhhhhh
Q 014312 84 YNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETFNVPGLYIAVNSVLALAA 163 (427)
Q Consensus 84 ~~~~~Pi~~G~i~d~~~~e~i~~~~l~~~L~~~~~~~~vll~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~lal~~ 163 (427)
+.+++|+++|.|.|||.++.+|+|+|.+.|+++++++++++++|++++...|++++|++||.||++++++++++++|+|+
T Consensus 65 ~~~~~Pi~~G~i~d~d~~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a 144 (375)
T 2fxu_A 65 LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYA 144 (375)
T ss_dssp EEEECSEETTEECCHHHHHHHHHHHHHTTSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHH
T ss_pred cceeccccCCcccCHHHHHHHHHHHHHHhcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeee
Confidence 89999999999999999999999999899999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCcceEEEEEcCCCceEEEEeecceecccCceEeccchHHHHHHHHHHHHhcCCCCCCcchHHHHHHhhhhcCcc
Q 014312 164 GYTTSKCEMTGVVVDVGDGATYVVPVAEGYVIGSSIKSIPIAGKDVTLFIQQLMRERGENVPPEDSFEVARKVKEMYCYT 243 (427)
Q Consensus 164 ~g~~~~~~~tglVVDiG~~~t~v~pV~dG~~l~~~~~~~~~gG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~iKe~~c~v 243 (427)
+| .++++|||+|++.|+|+||++|+++.++..++++||+++|++|.++|..+++.+....+.+.++++|+++||+
T Consensus 145 ~g-----~~~~lVvDiG~gtt~v~~v~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v 219 (375)
T 2fxu_A 145 SG-----RTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYV 219 (375)
T ss_dssp TT-----CSSEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHCCC
T ss_pred cC-----CCeEEEEEcCCCceEEeEeECCEEeccceEEeccCHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHhh
Confidence 98 7899999999999999999999999999999999999999999999999888776556778999999999999
Q ss_pred cccHHHHHhhccCCCccccceeeccCCCCCCceEEeecceeeecccccccCCCCCCCCCCChHHHHHHHHHhCChhhHHH
Q 014312 244 CSDIVKEYNKHDKEPSKYLKQWRGIKPKTGAPYSCDIGYERFLGPEVFFNPEIYSSDFTTPLPAVIDKCIQSAPIDTRRA 323 (427)
Q Consensus 244 ~~d~~~e~~~~~~~~~~~~~~~~~~~~~~g~~~~i~i~~er~~~~E~LF~P~~~~~~~~~~l~~~i~~~i~~~~~d~r~~ 323 (427)
+.++.++++..... ......|.+|+ |+ .+.++.|||.+||.||+|++++.+ ..+|+++|.++|++||+|+|+.
T Consensus 220 ~~~~~~e~~~~~~~-~~~~~~~~lpd---g~--~i~i~~erf~~~E~lf~p~~~~~~-~~~i~~~i~~~i~~~~~~~~~~ 292 (375)
T 2fxu_A 220 ALDFENEMATAASS-SSLEKSYELPD---GQ--VITIGNERFRCPETLFQPSFIGME-SAGIHETTYNSIMKCDIDIRKD 292 (375)
T ss_dssp CSSHHHHHHHHHHC-STTCEEEECTT---SC--EEEESTHHHHHHHTTTCGGGGTCC-SCCHHHHHHHHHHTSCHHHHHH
T ss_pred cccHHHHHHhhccc-CccCeEEECCC---CC--EEEEChhheechHhhCCCccCCCC-CCCHHHHHHHHHHhCCHHHHHH
Confidence 99988876654321 12345788876 76 789999999999999999998877 5799999999999999999999
Q ss_pred hhcCeEEecCccCcccHHHHHHHHHHHHHHHhhhhhhcccCCccCCCCeeEEEecCCCccceeeecceeecccccccccc
Q 014312 324 LYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASDARLGGEVKAQPVEVNVVSHAIQRYAVWFGGSVLASTPEFFAAC 403 (427)
Q Consensus 324 l~~nIil~GG~s~i~G~~eRL~~eL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~W~Ggsilasl~~f~~~~ 403 (427)
+++||+||||+|++|||.+||++||..+. |...+++|..+++|.+++|+|||++|++++|+++|
T Consensus 293 l~~~IvLtGG~s~~pG~~~rl~~el~~~~----------------p~~~~v~v~~~~~p~~~~w~G~si~a~l~~f~~~~ 356 (375)
T 2fxu_A 293 LYANNVMSGGTTMYPGIADRMQKEITALA----------------PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMW 356 (375)
T ss_dssp HHTCEEEESGGGCSTTHHHHHHHHHHHHS----------------CTTCCCCEECCTTTTSHHHHHHHHHHHCGGGGGGS
T ss_pred HHhCcEeeCCCCCCccHHHHHHHHHHHhC----------------CCCeeEEEEcCCCCCccEEcchHHhhCcccHhhce
Confidence 99999999999999999999999999876 34456778888899999999999999999999999
Q ss_pred cchHHHhhcCcceeeecCC
Q 014312 404 HTKAEYEEYGASICRSNPV 422 (427)
Q Consensus 404 itk~eY~e~G~~~~~~~~~ 422 (427)
|||+||+|+|+++++|||+
T Consensus 357 itk~ey~e~G~~~~~~k~~ 375 (375)
T 2fxu_A 357 ITKQEYDEAGPSIVHRKCF 375 (375)
T ss_dssp EEHHHHHHHCGGGGC----
T ss_pred eeHHHHhhhChHHHhhhcc
Confidence 9999999999999999984
No 6
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=100.00 E-value=7.2e-78 Score=596.91 Aligned_cols=383 Identities=34% Similarity=0.563 Sum_probs=161.6
Q ss_pred CCCCcEEEeCCCccEEEEEcCCCCCceeeeeeEEeeccccccccccchhhhhhhhccCCCCCCCeEEccccccccCCCCC
Q 014312 4 TSRPAVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADLDFFIGDEAVTKSRSSST 83 (427)
Q Consensus 4 ~~~~~vVlD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~~~~ 83 (427)
.+.++||||+||+++|+||+|++.|++++||++++++..... . ..+...+++++|++|...+. .
T Consensus 4 ~~~~~ivID~Gs~~~k~G~ag~~~P~~~~Ps~v~~~~~~~~~-----------~--~~~~~~~~~~vG~ea~~~~~---~ 67 (394)
T 1k8k_B 4 QGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTT-----------K--VGNIEIKDLMVGDEASELRS---M 67 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCEEEEECCCCeEEEeeCCCCCcceeccceeEEEcccccc-----------c--ccCCCCCCeEEChHHHhcCC---C
Confidence 456889999999999999999999999999999987532100 0 00122457899999988765 4
Q ss_pred cEEeCcccCCccCCHHHHHHHHHHHH-hhccCCCCCCceeEEEeCCCCCHHHHHHHHHHhhhccCCCeEEEechhhhhhh
Q 014312 84 YNLSYPIRHGQVDNWDAMERYWQQCI-FNYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETFNVPGLYIAVNSVLALA 162 (427)
Q Consensus 84 ~~~~~Pi~~G~i~d~~~~e~i~~~~l-~~~L~~~~~~~~vll~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~lal~ 162 (427)
+.+++|+++|.|.|||.++.+|+|+| ++.|+++++++++++++|+++++..|++++|++||.|++|++++++++++|+|
T Consensus 68 ~~~~~Pi~~G~i~dwd~~e~i~~~~~~~~~L~~~~~~~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~ 147 (394)
T 1k8k_B 68 LEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLY 147 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeeccccCCEEecHHHHHHHHHHHhcccccCcCCCCCcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHH
Confidence 89999999999999999999999999 89999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCcceEEEEEcCCCceEEEEeecceecccCceEeccchHHHHHHHHHHHHhcCCCCCCcchHHHHHHhhhhcCc
Q 014312 163 AGYTTSKCEMTGVVVDVGDGATYVVPVAEGYVIGSSIKSIPIAGKDVTLFIQQLMRERGENVPPEDSFEVARKVKEMYCY 242 (427)
Q Consensus 163 ~~g~~~~~~~tglVVDiG~~~t~v~pV~dG~~l~~~~~~~~~gG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~iKe~~c~ 242 (427)
++| .++|+|||+|++.|+|+||++|+++.+++.++++||+++|++|.++|+.+++++....+.+.+++||+++||
T Consensus 148 a~g-----~~~~lVVDiG~g~T~v~pv~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~ae~iK~~~~~ 222 (394)
T 1k8k_B 148 AQG-----LLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCY 222 (394)
T ss_dssp -----------CCEEEECSSCEEEECEETTEECSTTCEEESCCHHHHHHHHHHHHHHTTCCCCTTTTHHHHHHHHHHHCC
T ss_pred hCC-----CceEEEEEcCCCceEeeeeECCEEcccceEEeeccHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhhee
Confidence 998 789999999999999999999999999999999999999999999999998887666788999999999999
Q ss_pred ccccHHHHHhhccCCCccccceeeccCCCCCCceEEeecceeeecccccccCCCCCCCCCCChHHHHHHHHHhCChhhHH
Q 014312 243 TCSDIVKEYNKHDKEPSKYLKQWRGIKPKTGAPYSCDIGYERFLGPEVFFNPEIYSSDFTTPLPAVIDKCIQSAPIDTRR 322 (427)
Q Consensus 243 v~~d~~~e~~~~~~~~~~~~~~~~~~~~~~g~~~~i~i~~er~~~~E~LF~P~~~~~~~~~~l~~~i~~~i~~~~~d~r~ 322 (427)
++.|+.++++.... .......|.+|+ |+ .+.++.|||.+||+||+|++++.+ ..+|+++|.++|++||+|+|+
T Consensus 223 v~~d~~~~~~~~~~-~~~~~~~~~lpd---g~--~i~i~~erf~~~E~Lf~p~~~~~~-~~~i~~~i~~~i~~~~~d~r~ 295 (394)
T 1k8k_B 223 VGYNIEQEQKLALE-TTVLVESYTLPD---GR--IIKVGGERFEAPEALFQPHLINVE-GVGVAELLFNTIQAADIDTRS 295 (394)
T ss_dssp CCSSHHHHHHHHHH-CSTTCEEEECTT---SC--EEEECTHHHHTGGGGTCGGGGTCC-SCCHHHHHHHHHHHSCTTTHH
T ss_pred EecCHHHHHHhhcc-CCcCceEEECCC---CC--EEEECchhhcChHhhCCchhccCC-CCCHHHHHHHHHHhCCHHHHH
Confidence 99998877654321 113345788887 76 889999999999999999998887 579999999999999999999
Q ss_pred HhhcCeEEecCccCcccHHHHHHHHHHHHHHHhhhhhhcccCCccCCCCeeEEEecCCCccceeeecceeeccccccc-c
Q 014312 323 ALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASDARLGGEVKAQPVEVNVVSHAIQRYAVWFGGSVLASTPEFF-A 401 (427)
Q Consensus 323 ~l~~nIil~GG~s~i~G~~eRL~~eL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~W~Ggsilasl~~f~-~ 401 (427)
.|++||+||||+|++|||.+||++||..++..+.. .+...+|...+++|.++++|.+++|+||||+|++++|+ +
T Consensus 296 ~l~~nIvLtGG~s~~~G~~~rl~~el~~~~~~~~~-----~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl~~f~~~ 370 (394)
T 1k8k_B 296 EFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVL-----KGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDN 370 (394)
T ss_dssp HHHTTCEEESGGGCSTTHHHHHHHHHHHHHHHHTC-----SSCCCTTCCCCC----------------------------
T ss_pred HHHhCEEEeCcccccccHHHHHHHHHHHHHhhhhc-----ccccCCCCceEEEEecCCCcceeEEhhhHHhhCCcCCccc
Confidence 99999999999999999999999999987632210 01111255567888888899999999999999999999 9
Q ss_pred cccchHHHhhcCcceeee
Q 014312 402 ACHTKAEYEEYGASICRS 419 (427)
Q Consensus 402 ~~itk~eY~e~G~~~~~~ 419 (427)
+||||+||+|+|+++++|
T Consensus 371 ~~itk~eY~e~G~~~~~~ 388 (394)
T 1k8k_B 371 FWMTRQEYQEKGVRVLEK 388 (394)
T ss_dssp ------------------
T ss_pred eeecHHHHhhhCHHHHHh
Confidence 999999999999999998
No 7
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=100.00 E-value=7.9e-68 Score=533.85 Aligned_cols=400 Identities=18% Similarity=0.294 Sum_probs=313.0
Q ss_pred CCcEEEeCCCccEEEEEcCCCCCceeeeeeEEeeccccccc------cc----cchhh----------------------
Q 014312 6 RPAVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQS------RS----SSKAN---------------------- 53 (427)
Q Consensus 6 ~~~vVlD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~------~~----~~~~~---------------------- 53 (427)
..+|||++||.++|+|+|.|..|. .+|++|+++....... .. +....
T Consensus 40 ~~~IVIHpGS~~lRIG~AsD~~P~-~ip~~iA~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~k~rmr~~k~r 118 (655)
T 4am6_A 40 TATIVIHPGSNSIKIGFPKDDHPV-VVPNCVAVPKKWLDLENSEHVENVCLQREQSEEFNNIKSEMEKNFRERMRYYKRK 118 (655)
T ss_dssp GGEEEEECCSSEEEEECTTSSSCE-EEESCEEEEGGGSCCSSSCCCCTTCCCSCCCHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred CCeEEEcCCCcceeeeecCCCCCc-ccceeEEeccccccCCCccccCccccchhhhHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 568999999999999999999997 9999999874322210 00 00000
Q ss_pred -----------hh----------hhhccC-CC--CCCCeEEccccccccCCCCCcEEeCcccCCccC----C-------H
Q 014312 54 -----------WL----------AQYNAG-VM--ADLDFFIGDEAVTKSRSSSTYNLSYPIRHGQVD----N-------W 98 (427)
Q Consensus 54 -----------~~----------~~~~~~-~~--~~~~~~vg~~~~~~~~~~~~~~~~~Pi~~G~i~----d-------~ 98 (427)
|+ +..... .. ...+++||++|+..... .+.+++|+++|.|. | |
T Consensus 119 ~~pn~~e~~~~fN~~~~Pe~i~~~nDp~~~~W~~~~~d~~VGdEA~~~~r~--~l~l~~PI~~GvI~~~s~Dy~s~q~~W 196 (655)
T 4am6_A 119 VPGNAHEQVVSFNENSKPEIISEKNDPSPIEWIFDDSKLYYGSDALRCVDE--KFVIRKPFRGGSFNVKSPYYKSLAELI 196 (655)
T ss_dssp CSTTCCSSTTCCEEEECSCCCCSSSSCCSCCCBCCTTSCEEHHHHHTBCTT--TEEEECSEETTEECTTCSSCSSHHHHH
T ss_pred CCCCCHHHHHHhcCCCCCeECCCCCCccccccccCCCCEEEehHHhhCCcc--CeEEeccccCCEecccCCccccccccH
Confidence 11 000000 00 12588999999975433 59999999999998 8 9
Q ss_pred HHHHHHHHHHHhh-ccCCCCC---CceeEEEeCCCCCHHHHHHHHHHhhhccCCCeEEEechhhhhhhhccCCCCCcceE
Q 014312 99 DAMERYWQQCIFN-YLRCDPE---DHYFLLTESPLTAPESREYTGEIMFETFNVPGLYIAVNSVLALAAGYTTSKCEMTG 174 (427)
Q Consensus 99 ~~~e~i~~~~l~~-~L~~~~~---~~~vll~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~lal~~~g~~~~~~~tg 174 (427)
|++|.+|+|+|++ .|+++++ ++||||+||+++++..|++|+|+|||.|++|++|++.+++||+|++|. .++|
T Consensus 197 D~mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl----~ttG 272 (655)
T 4am6_A 197 SDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI----STST 272 (655)
T ss_dssp HHHHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC----SSCE
T ss_pred HHHHHHHHHHhccccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC----CCce
Confidence 9999999999984 8999986 899999999999999999999999999999999999999999999982 3799
Q ss_pred EEEEcCCCceEEEEeecceecccCceEeccchHHHHHHHHHHHHhcCC-----CCCCcchHHHHHHhhhhcCcc-cccHH
Q 014312 175 VVVDVGDGATYVVPVAEGYVIGSSIKSIPIAGKDVTLFIQQLMRERGE-----NVPPEDSFEVARKVKEMYCYT-CSDIV 248 (427)
Q Consensus 175 lVVDiG~~~t~v~pV~dG~~l~~~~~~~~~gG~~l~~~l~~~l~~~~~-----~~~~~~~~~~~~~iKe~~c~v-~~d~~ 248 (427)
||||+|++.|+|+||++|++++++++++++||+++|++|.++|+++++ +++...+.+++++|||++||| ..|+.
T Consensus 273 LVVDiG~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~t~~e~eiVrdIKEk~CyVs~~Di~ 352 (655)
T 4am6_A 273 CVVNIGAAETRIACVDEGTVLEHSAITLDYGGDDITRLFALFLLQSDFPLQDWKIDSKHGWLLAERLKKNFTTFQDADVA 352 (655)
T ss_dssp EEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHTTCSCCSCCTTSHHHHHHHHHHHHHHCCCCGGGCC
T ss_pred EEEcCCCceEEEEEEeCCEEEhhheeeecchHHHHHHHHHHHHHHcCCCccccCCCCcchHHHHHHHHHheEEEcccchh
Confidence 999999999999999999999999999999999999999999999986 455567889999999999999 44431
Q ss_pred -HHHhhccCCCccccceeeccCCC-CCCceEEeecceeeecccccccCCCCCCC--------------------------
Q 014312 249 -KEYNKHDKEPSKYLKQWRGIKPK-TGAPYSCDIGYERFLGPEVFFNPEIYSSD-------------------------- 300 (427)
Q Consensus 249 -~e~~~~~~~~~~~~~~~~~~~~~-~g~~~~i~i~~er~~~~E~LF~P~~~~~~-------------------------- 300 (427)
++ ..+.+..|. .+++|.++++.|||+|||+||+|++++..
T Consensus 353 ~q~------------~~f~~r~P~~~~~ky~i~vgdErflaPe~lF~Pei~~~~~~~~~~~~~~~~~~~~s~d~y~~~~n 420 (655)
T 4am6_A 353 VQL------------YNFMNRSPNQPTEKYEFKLFDEVMLAPLALFFPQIFKLIRTSSHKNSSLEFQLPESRDLFTNELN 420 (655)
T ss_dssp SEE------------EEEEECCSSSCEEEEEEEESSHHHHHHHGGGSTHHHHHTSCCCCCCHHHHTTSCCCBCTTTCCBC
T ss_pred hhh------------hcceeccCCCCCcceEEEECCeehhCchhcCChhhcccccccccccchhhhhcCccccccCCCCC
Confidence 11 112221221 13467899999999999999999763210
Q ss_pred ----------------------------------------------------CCCChHHHHHHHHH-hC-ChhhHH--Hh
Q 014312 301 ----------------------------------------------------FTTPLPAVIDKCIQ-SA-PIDTRR--AL 324 (427)
Q Consensus 301 ----------------------------------------------------~~~~l~~~i~~~i~-~~-~~d~r~--~l 324 (427)
...+|.++|.+||. .| ..|.++ ++
T Consensus 421 d~~S~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pLdkAIi~SIt~a~~~~d~~k~~~~ 500 (655)
T 4am6_A 421 DWNSLSQFESKEGNLYCDLNDDLKILNRILDAHNIIDQLQDKPENYGNTLKENFAPLEKAIVQSIANASITADVTRMNSF 500 (655)
T ss_dssp SCCCHHHHHHHTTCCGGGCCSHHHHHHHHHHHHHHHHHHHTSSCSCSCSSCCCCCCHHHHHHHHHHHHHHTSCGGGHHHH
T ss_pred CccchhHHhhhccccCCCCccHhhhhhhhhcccccccccccCCcccccccccccccHHHHHHHHHHhhhccccHHHHHHH
Confidence 01479999999998 44 235555 99
Q ss_pred hcCeEEecCccCcccHHHHHHHHHHHHHHH---------hhhh-------hhccc---CC--------------------
Q 014312 325 YKNIVLSGGSTMFKDFHRRLQRDLKKIVDA---------RVLA-------SDARL---GG-------------------- 365 (427)
Q Consensus 325 ~~nIil~GG~s~i~G~~eRL~~eL~~~~~~---------~~~~-------~~~~~---~~-------------------- 365 (427)
|+||+|+||+|+||||...|...|...-|. .++. .+... ++
T Consensus 501 y~nilivGggski~g~~~~L~dri~i~rp~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (655)
T 4am6_A 501 YSNILIVGGSSKIPALDFILTDRINIWRPSLLSSASFPQFYKKLTKEIKDLEGHYVNAPDKTEDENKQILQAQIKEKIVE 580 (655)
T ss_dssp HTCEEEESTTCCCTTHHHHHHHHHHHHSCSTTTBTTHHHHHHHHHHHHHHHHSTTCSCCSSSCCSSTTSTTHHHHHHHHH
T ss_pred hhcEEEEcCcccCccHHHHHHHHHHhhCcccccccccHHHHHHHHHhhhhhhhhhccccccccccchhhhhhhhhhhhhh
Confidence 999999999999999999888887762221 0010 00000 00
Q ss_pred ------------ccCCCCeeEEEecCCCc---cceeeecceeecccccccccccchHHHhhcCcceeeecCCCC
Q 014312 366 ------------EVKAQPVEVNVVSHAIQ---RYAVWFGGSVLASTPEFFAACHTKAEYEEYGASICRSNPVFK 424 (427)
Q Consensus 366 ------------~~~~~~~~v~v~~~~~~---~~~~W~Ggsilasl~~f~~~~itk~eY~e~G~~~~~~~~~~~ 424 (427)
.-...-++|+|++++.+ ++++|+||||||+|++|+++||||+||+|+|++|+++||+|+
T Consensus 581 ~l~~~~~~~~~~~~~~~~~~i~V~~~p~~~d~~~~~W~GgSvla~l~~f~e~wIt~~Eyde~G~~il~~k~~f~ 654 (655)
T 4am6_A 581 ELEEQHQNIEHQNGNEHIFPVSIIPPPRDMNPALIIWKGASVLAQIKLVEELFITNSDWDVHGSRILQYKCIFT 654 (655)
T ss_dssp HHHHHHHHHHHTTSCCCBCCCCEECCCTTSCGGGHHHHHHHHHTTSHHHHHHCEEHHHHHHHGGGGGGTSCSSC
T ss_pred hhhhhhhhhhhccccCCceeeEEeCCccccCcceeEEecceeeeecccHhheeecHHHHhhhcchheEeccccC
Confidence 00012345888988866 899999999999999999999999999999999999999996
No 8
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=4.7e-35 Score=285.15 Aligned_cols=322 Identities=17% Similarity=0.153 Sum_probs=248.0
Q ss_pred CCcEEEeCCCccEEEEEcCCCCCceeeeeeEEeeccccccccccchhhhhhhhccCCCCCCCeEEccccccccCC-CCCc
Q 014312 6 RPAVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADLDFFIGDEAVTKSRS-SSTY 84 (427)
Q Consensus 6 ~~~vVlD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~-~~~~ 84 (427)
..+|+||+||.++++|++++. |.+.+||+++.... ....+++|++|...... ..+.
T Consensus 3 ~~~igIDlGT~~s~v~~~~~~-~~~~~PS~v~~~~~----------------------~~~~~~vG~~A~~~~~~~~~~~ 59 (344)
T 1jce_A 3 RKDIGIDLGTANTLVFLRGKG-IVVNEPSVIAIDST----------------------TGEILKVGLEAKNMIGKTPATI 59 (344)
T ss_dssp -CEEEEEECSSEEEEEETTTE-EEEEEESCEEEETT----------------------TCCEEEESHHHHTTTTCCCTTE
T ss_pred CceEEEEcCcCcEEEEECCCC-EEEeeCcEEEEecC----------------------CCcEEEEcHHHHHhcccCCCCe
Confidence 368999999999999999876 77889999998631 02346899998776432 2357
Q ss_pred EEeCcccCCccCCHHHHHHHHHHHHhhccCCC-CCCceeEEEeCCCCCHHHHHHHHHHhhhccCCCeEEEechhhhhhhh
Q 014312 85 NLSYPIRHGQVDNWDAMERYWQQCIFNYLRCD-PEDHYFLLTESPLTAPESREYTGEIMFETFNVPGLYIAVNSVLALAA 163 (427)
Q Consensus 85 ~~~~Pi~~G~i~d~~~~e~i~~~~l~~~L~~~-~~~~~vll~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~lal~~ 163 (427)
.+.+|+++|.+.||+.++.+|.+++.+..... ..+.++++++|+.++...|+.+.+. +|.+|++.+.++.+|.+|+++
T Consensus 60 ~~~~p~~~g~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~vitvP~~~~~~~r~~~~~a-~~~aG~~~~~li~ep~Aaa~~ 138 (344)
T 1jce_A 60 KAIRPMRDGVIADYTVALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILDA-GLEAGASKVFLIEEPMAAAIG 138 (344)
T ss_dssp EEECCEETTEESSHHHHHHHHHHHHHHHHTSCCSCCCEEEEEECTTCCHHHHHHHHHH-HHHTTCSEEEEEEHHHHHHHH
T ss_pred EEEecCCCCeeCChHHHHHHHHHHHHHHhhccccCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEeccCCHHHHHHh
Confidence 78899999999999999999999986533322 4468899999999999999999984 799999999999999999999
Q ss_pred ccCCCCCcceEEEEEcCCCceEEEEeecceecccCceEeccchHHHHHHHHHHHHhc-CCCCCCcchHHHHHHhhhhcCc
Q 014312 164 GYTTSKCEMTGVVVDVGDGATYVVPVAEGYVIGSSIKSIPIAGKDVTLFIQQLMRER-GENVPPEDSFEVARKVKEMYCY 242 (427)
Q Consensus 164 ~g~~~~~~~tglVVDiG~~~t~v~pV~dG~~l~~~~~~~~~gG~~l~~~l~~~l~~~-~~~~~~~~~~~~~~~iKe~~c~ 242 (427)
++...+...+.+|||+|+++|+++++..|.++. ....++||+++|+.|.+.+.++ +.. .....+|++|+++|+
T Consensus 139 ~~~~~~~~~~~lVvDiGggttdvsv~~~~~~~~--~~~~~lGG~~id~~l~~~l~~~~~~~----~~~~~ae~~K~~l~~ 212 (344)
T 1jce_A 139 SNLNVEEPSGNMVVDIGGGTTEVAVISLGSIVT--WESIRIAGDEMDEAIVQYVRETYRVA----IGERTAERVKIEIGN 212 (344)
T ss_dssp TTCCTTSSSCEEEEEECSSCEEEEEEETTEEEE--EEEESCSHHHHHHHHHHHHHHHHCEE----CCHHHHHHHHHHHCB
T ss_pred cCCCCCCCceEEEEEeCCCeEEEEEEEcCCEEe--eCCCCccChhHHHHHHHHHHHHhCcc----cCHHHHHHHHHHHhc
Confidence 885332346899999999999999999998774 4678999999999999998765 221 346789999999998
Q ss_pred ccccHHHHHhhccCCCccccceeecc--CCCCCCceEEeecceeeecccccccCCCCCCCCCCChHHHHHHHHHhCChhh
Q 014312 243 TCSDIVKEYNKHDKEPSKYLKQWRGI--KPKTGAPYSCDIGYERFLGPEVFFNPEIYSSDFTTPLPAVIDKCIQSAPIDT 320 (427)
Q Consensus 243 v~~d~~~e~~~~~~~~~~~~~~~~~~--~~~~g~~~~i~i~~er~~~~E~LF~P~~~~~~~~~~l~~~i~~~i~~~~~d~ 320 (427)
...+...+. ..+.++ +..+|.+..+.++.++|. .+|+|.. ..+.+.|.++|++++.++
T Consensus 213 ~~~~~~~~~-----------~~~~~~~~~~~~g~~~~~~i~~~~~~---~~~~~~~------~~i~~~i~~~l~~~~~~~ 272 (344)
T 1jce_A 213 VFPSKENDE-----------LETTVSGIDLSTGLPRKLTLKGGEVR---EALRSVV------VAIVESVRTTLEKTPPEL 272 (344)
T ss_dssp CSCCHHHHH-----------CEEEEEEEETTTTEEEEEEEEHHHHH---HHTHHHH------HHHHHHHHHHHHTSCHHH
T ss_pred cCccccCCc-----------ceEEEeccccCCCCceeEEEeHHHHH---HHHHHHH------HHHHHHHHHHHHhCCchh
Confidence 765432211 011111 111254445666655553 4555532 358899999999999988
Q ss_pred HHHhh-cCeEEecCccCcccHHHHHHHHHHHHHHHhhhhhhcccCCccCCCCeeEEEecCCCccceeeecceeecc-ccc
Q 014312 321 RRALY-KNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASDARLGGEVKAQPVEVNVVSHAIQRYAVWFGGSVLAS-TPE 398 (427)
Q Consensus 321 r~~l~-~nIil~GG~s~i~G~~eRL~~eL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~W~Ggsilas-l~~ 398 (427)
+..++ ++|+|+||+|++|||.++|++++.. ++ ....+|.+++|+||+++++ +++
T Consensus 273 ~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~----------------------~v--~~~~~p~~ava~Gaa~~a~~~~~ 328 (344)
T 1jce_A 273 VSDIIERGIFLTGGGSLLRGLDTLLQKETGI----------------------SV--IRSEEPLTAVAKGAGMVLDKVNI 328 (344)
T ss_dssp HHHHHHHCEEEESGGGCSBTHHHHHHHHHSS----------------------CE--EECSSTTTHHHHHHHHGGGCHHH
T ss_pred ccchhhCcEEEECccccchHHHHHHHHHHCC----------------------Cc--cccCChHHHHHHHHHHHHhChHH
Confidence 88888 7999999999999999999988831 22 2345788999999999998 466
Q ss_pred ccc
Q 014312 399 FFA 401 (427)
Q Consensus 399 f~~ 401 (427)
|++
T Consensus 329 ~~~ 331 (344)
T 1jce_A 329 LKK 331 (344)
T ss_dssp HTT
T ss_pred HHH
Confidence 643
No 9
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.88 E-value=2.1e-22 Score=189.20 Aligned_cols=213 Identities=16% Similarity=0.161 Sum_probs=159.3
Q ss_pred eCcccCCccCCHHHHHHHHHHHHhhccCCCC-CCceeEEEeCCCCCHHHHHHHHHHhhhccCCCeEEEechhhhhhhhcc
Q 014312 87 SYPIRHGQVDNWDAMERYWQQCIFNYLRCDP-EDHYFLLTESPLTAPESREYTGEIMFETFNVPGLYIAVNSVLALAAGY 165 (427)
Q Consensus 87 ~~Pi~~G~i~d~~~~e~i~~~~l~~~L~~~~-~~~~vll~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~lal~~~g 165 (427)
..|+++|.+.||+.++.+|++++........ ....++++.|.......| +.++.+++.+|++...+..++.+++++++
T Consensus 59 ~~~l~~g~i~d~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~-~~~~~~~~~~g~~~~~i~~e~~A~a~~~~ 137 (272)
T 3h1q_A 59 ASVVKDGLVVDYIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNA-EACGHVVAGAGLELVTLVDEPVAAARALG 137 (272)
T ss_dssp CCCCBTTBCTTHHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CT-THHHHHHHHTTCEEEEEECHHHHHHHHHT
T ss_pred ccccCCCEEEcHHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHH-HHHHHHHHHcCCeeeecccHHHHHHHHHc
Confidence 4689999999999999999998765433222 224566677665555444 45666889999999999999999999998
Q ss_pred CCCCCcceEEEEEcCCCceEEEEeecceecccCceEeccchHHHHHHHHHHHHhcCCCCCCcchHHHHHHhhhhcCcccc
Q 014312 166 TTSKCEMTGVVVDVGDGATYVVPVAEGYVIGSSIKSIPIAGKDVTLFIQQLMRERGENVPPEDSFEVARKVKEMYCYTCS 245 (427)
Q Consensus 166 ~~~~~~~tglVVDiG~~~t~v~pV~dG~~l~~~~~~~~~gG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~iKe~~c~v~~ 245 (427)
..+++|||+|++.|.++++.+|.++. ...+++||.++++.+.+.+. .+.+.++++|++++- .
T Consensus 138 -----~~~~~viDiGggst~~~~~~~g~~~~--~~~~~~Gg~~~~~~l~~~l~---------~~~~~ae~~k~~~~~--~ 199 (272)
T 3h1q_A 138 -----INDGIVVDIGGGTTGIAVIEKGKITA--TFDEPTGGTHLSLVLAGSYK---------IPFEEAETIKKDFSR--H 199 (272)
T ss_dssp -----CSSEEEEEECSSCEEEEEEETTEEEE--ECCBSCCHHHHHHHHHHHHT---------CCHHHHHHHHHSSTT--H
T ss_pred -----CCCEEEEEECCCcEEEEEEECCEEEE--EecCCCcHHHHHHHHHHHhC---------CCHHHHHHHHHhcCC--H
Confidence 66899999999999999999999884 35689999999999998875 345788999987651 0
Q ss_pred cHHHHHhhccCCCccccceeeccCCCCCCceEEeecceeeecccccccCCCCCCCCCCChHHHHHHHHHhCChhhHHHhh
Q 014312 246 DIVKEYNKHDKEPSKYLKQWRGIKPKTGAPYSCDIGYERFLGPEVFFNPEIYSSDFTTPLPAVIDKCIQSAPIDTRRALY 325 (427)
Q Consensus 246 d~~~e~~~~~~~~~~~~~~~~~~~~~~g~~~~i~i~~er~~~~E~LF~P~~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~ 325 (427)
+++.. +.+.+ ...+.+.+.+++++++ ..
T Consensus 200 ---~~~~~---------------------------------~~~~~----------~~~i~~~i~~~l~~~~------~~ 227 (272)
T 3h1q_A 200 ---REIMR---------------------------------VVRPV----------IEKMALIVKEVIKNYD------QT 227 (272)
T ss_dssp ---HHHHH---------------------------------HHHHH----------HHHHHHHHHHHTTTSC------SS
T ss_pred ---HHHHH---------------------------------HHHHH----------HHHHHHHHHHHHHhcC------CC
Confidence 11100 00001 1247778888888776 12
Q ss_pred cCeEEecCccCcccHHHHHHHHHHHHHHHhhhhhhcccCCccCCCCeeEEEecCCCccceeeecceeec
Q 014312 326 KNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASDARLGGEVKAQPVEVNVVSHAIQRYAVWFGGSVLA 394 (427)
Q Consensus 326 ~nIil~GG~s~i~G~~eRL~~eL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~W~Ggsila 394 (427)
++|+|+||+|++|||.++|+++|.. .+..+.+|.++.|+|++++|
T Consensus 228 ~~ivL~GG~a~~~~l~~~l~~~l~~------------------------~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 228 LPVYVVGGTAYLTGFSEEFSRFLGK------------------------EVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp CCEEEESGGGGSTTHHHHHHHHHSS------------------------CCBCCSSGGGHHHHHHHTTC
T ss_pred CEEEEECCccchhhHHHHHHHHhCC------------------------CccccCChHHHHHHHHHhcC
Confidence 5999999999999999999988831 12235678999999999875
No 10
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.87 E-value=3.4e-22 Score=203.95 Aligned_cols=306 Identities=17% Similarity=0.168 Sum_probs=203.3
Q ss_pred CcEEEeCCCccEEEEEcCCCCCcee--------eeeeEEeeccccccccccchhhhhhhhccCCCCCCCeEEcccccccc
Q 014312 7 PAVVIDNGTGYTKMGFAGNVEPCFI--------LPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADLDFFIGDEAVTKS 78 (427)
Q Consensus 7 ~~vVlD~Gs~~~k~G~ag~~~P~~~--------~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~ 78 (427)
.+|.||+||.++++|++.+..|.++ +||+++.. ..+.++|++|....
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~-------------------------~~~~~vG~~A~~~~ 57 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFK-------------------------NGERLVGEVAKRQA 57 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEES-------------------------SSSEEESHHHHTTT
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEEC-------------------------CCcEEECHHHHHhH
Confidence 5899999999999999988888876 78888773 22467888776543
Q ss_pred CCCC--CcEEeC----ccc---CCccCCHHHHHHHHHHHHhh-------ccCCCCCCceeEEEeCCCCCHHHHHHHHHHh
Q 014312 79 RSSS--TYNLSY----PIR---HGQVDNWDAMERYWQQCIFN-------YLRCDPEDHYFLLTESPLTAPESREYTGEIM 142 (427)
Q Consensus 79 ~~~~--~~~~~~----Pi~---~G~i~d~~~~e~i~~~~l~~-------~L~~~~~~~~vll~e~~~~~~~~r~~l~e~l 142 (427)
.... -..+++ |++ +|. +|+ .++++.++|.. .++ .....++++.|..++..+|+.+.+.
T Consensus 58 ~~~p~~~~~~Kr~lg~p~~~~~~g~--~~~-~~ei~a~~L~~l~~~ae~~l~--~~~~~~VitvPa~~~~~qr~a~~~a- 131 (509)
T 2v7y_A 58 ITNPNTIISIKRHMGTDYKVEIEGK--QYT-PQEISAIILQYLKSYAEDYLG--EPVTRAVITVPAYFNDAQRQATKDA- 131 (509)
T ss_dssp TTCSSEEECGGGTTTSCCCEEETTE--EEC-HHHHHHHHHHHHHHHHHHHHT--SCCCEEEEEECTTCCHHHHHHHHHH-
T ss_pred HhCCCcHHHHHHhcCCCcEEEECCE--EEc-HHHHHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHHHHHHHH-
Confidence 2110 011111 555 664 343 34455544422 122 2346799999999999999999886
Q ss_pred hhccCCCeEEEechhhhhhhhccCCCCCcceEEEEEcCCCceEEEEee--ccee-cccCceEeccchHHHHHHHHHHHHh
Q 014312 143 FETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATYVVPVA--EGYV-IGSSIKSIPIAGKDVTLFIQQLMRE 219 (427)
Q Consensus 143 fe~~~~~~v~~~~~~~lal~~~g~~~~~~~tglVVDiG~~~t~v~pV~--dG~~-l~~~~~~~~~gG~~l~~~l~~~l~~ 219 (427)
++..|++.+.++.+|.+|+++++...+...+.+|+|+|+++|+++.+. +|.. +.......++||.++++.|.+.+.+
T Consensus 132 ~~~AGl~~~~li~Ep~AAAlay~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~ 211 (509)
T 2v7y_A 132 GRIAGLEVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVN 211 (509)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHTTGGGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred HHHcCCCeEEEecCHHHHHHHHhhccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHH
Confidence 588999999999999999998874322246899999999999999775 4643 2222344689999999999888765
Q ss_pred c-----CCCCCCc-----chHHHHHHhhhhcCcccccHHHHHhhccCCCccccceeeccC---CCCC-CceEEeecceee
Q 014312 220 R-----GENVPPE-----DSFEVARKVKEMYCYTCSDIVKEYNKHDKEPSKYLKQWRGIK---PKTG-APYSCDIGYERF 285 (427)
Q Consensus 220 ~-----~~~~~~~-----~~~~~~~~iKe~~c~v~~d~~~e~~~~~~~~~~~~~~~~~~~---~~~g-~~~~i~i~~er~ 285 (427)
+ +..+... .-...+|++|+.++.... ..+.++. ..+| ....+.++.+.|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~-----------------~~i~l~~~~~~~~G~~~~~~~itr~~f 274 (509)
T 2v7y_A 212 QFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQ-----------------TQISLPFISANENGPLHLEMTLTRAKF 274 (509)
T ss_dssp HHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSE-----------------EEEEEEEEEEETTEEEEEEEEEEHHHH
T ss_pred HHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCc-----------------EEEEEeccccCCCCCeeEEEEEEHHHH
Confidence 3 4333211 113567888887765321 0111110 0002 112334444443
Q ss_pred ecccccccCCCCCCCCCCChHHHHHHHHHhCChhhHHHhhcCeEEecCccCcccHHHHHHHHHHHHHHHhhhhhhcccCC
Q 014312 286 LGPEVFFNPEIYSSDFTTPLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASDARLGG 365 (427)
Q Consensus 286 ~~~E~LF~P~~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~~nIil~GG~s~i~G~~eRL~~eL~~~~~~~~~~~~~~~~~ 365 (427)
|.+|.|.+ ..+.+.|.++|..+.. .....++|+|+||+|.+|++.++|++++...
T Consensus 275 ---e~l~~~~~------~~i~~~i~~~L~~a~~--~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~-------------- 329 (509)
T 2v7y_A 275 ---EELSAHLV------ERTMGPVRQALQDAGL--TPADIDKVILVGGSTRIPAVQEAIKRELGKE-------------- 329 (509)
T ss_dssp ---HHHTHHHH------HTTHHHHHHHHHHHTC--CGGGCSEEEEESGGGGCHHHHHHHHHHHSSC--------------
T ss_pred ---HHHHHHHH------HHHHHHHHHHHHHcCC--ChhHCcEEEEECCcccChHHHHHHHHHhCCC--------------
Confidence 34555432 2578888888887653 3445689999999999999999999887310
Q ss_pred ccCCCCeeEEEecCCCccceeeecceeecc
Q 014312 366 EVKAQPVEVNVVSHAIQRYAVWFGGSVLAS 395 (427)
Q Consensus 366 ~~~~~~~~v~v~~~~~~~~~~W~Ggsilas 395 (427)
+....+|..++|+||+++|.
T Consensus 330 ----------~~~~~~p~~aVa~Gaa~~a~ 349 (509)
T 2v7y_A 330 ----------PHKGVNPDEVVAIGAAIQGG 349 (509)
T ss_dssp ----------CBCCSCTTTHHHHHHHHHHH
T ss_pred ----------cCcCCCchhhhHhhHHHHHH
Confidence 12345678999999999986
No 11
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.83 E-value=1.1e-20 Score=186.13 Aligned_cols=247 Identities=14% Similarity=0.069 Sum_probs=163.3
Q ss_pred HHHHHHHHHHHHh---hccCCCCCCceeEEEeCCCCCHHHHHHHHHHhhhccCCCeEEEechhhhhhhhccCCCC-Ccce
Q 014312 98 WDAMERYWQQCIF---NYLRCDPEDHYFLLTESPLTAPESREYTGEIMFETFNVPGLYIAVNSVLALAAGYTTSK-CEMT 173 (427)
Q Consensus 98 ~~~~e~i~~~~l~---~~L~~~~~~~~vll~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~lal~~~g~~~~-~~~t 173 (427)
.+....+++++.. ..++. ....++++.|..++...|+.+.+. ++..|++.+.++.+|.+|+++++...+ ...+
T Consensus 113 ~~i~~~~L~~l~~~a~~~~~~--~~~~~vitvP~~~~~~~r~~~~~a-~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~ 189 (383)
T 1dkg_D 113 PQISAEVLKKMKKTAEDYLGE--PVTEAVITVPAYFNDAQRQATKDA-GRIAGLEVKRIINEPTAAALAYGLDKGTGNRT 189 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHSS--CCCEEEECBCTTCCHHHHHHHHHH-HHHTTCEESCCCBHHHHHHHHHTCCC-CCEEE
T ss_pred HHHHHHHHHHHHHHHHHHhCC--CCCeEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEeccHHHHHHHHHhccCCCCcE
Confidence 3344455555432 22332 235699999999999999999886 588999999999999999988874321 2457
Q ss_pred EEEEEcCCCceEEEEeecc------eeccc-CceEeccchHHHHHHHHHHHHhc-----CCCCCCc-----chHHHHHHh
Q 014312 174 GVVVDVGDGATYVVPVAEG------YVIGS-SIKSIPIAGKDVTLFIQQLMRER-----GENVPPE-----DSFEVARKV 236 (427)
Q Consensus 174 glVVDiG~~~t~v~pV~dG------~~l~~-~~~~~~~gG~~l~~~l~~~l~~~-----~~~~~~~-----~~~~~~~~i 236 (427)
.+|||+|+++|+++.+..+ ..... .....++||.++|+.|.+++.++ +..+... .....+|++
T Consensus 190 ~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~ 269 (383)
T 1dkg_D 190 IAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKA 269 (383)
T ss_dssp EEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHH
Confidence 9999999999999987644 22111 22346899999999999888654 4443321 123568888
Q ss_pred hhhcCcccccHHHHHhhccCCCccccceeeccCCCCC-CceEEeecceeeecccccccCCCCCCCCCCChHHHHHHHHHh
Q 014312 237 KEMYCYTCSDIVKEYNKHDKEPSKYLKQWRGIKPKTG-APYSCDIGYERFLGPEVFFNPEIYSSDFTTPLPAVIDKCIQS 315 (427)
Q Consensus 237 Ke~~c~v~~d~~~e~~~~~~~~~~~~~~~~~~~~~~g-~~~~i~i~~er~~~~E~LF~P~~~~~~~~~~l~~~i~~~i~~ 315 (427)
|+.++..... .......+..++ | ....+.++.+.| |.+|.|.+ ..+.++|.++|.+
T Consensus 270 K~~ls~~~~~-----------~i~i~~~~~~~~---G~~~~~~~it~~~~---~~~~~~~~------~~i~~~i~~~l~~ 326 (383)
T 1dkg_D 270 KIELSSAQQT-----------DVNLPYITADAT---GPKHMNIKVTRAKL---ESLVEDLV------NRSIELLKVALQD 326 (383)
T ss_dssp HHHTTSSSEE-----------EEEEEEEEEETT---EEEEEEEEEEHHHH---HHHSHHHH------HHHHHHHHHHHHT
T ss_pred HHHhCCCCce-----------EEEEecccccCC---CCeeEEEEEeHHHH---HHHHHHHH------HHHHHHHHHHHHH
Confidence 9887754210 000000011111 2 112334544443 24455432 2578888899988
Q ss_pred CChhhHHHhhcCeEEecCccCcccHHHHHHHHHHHHHHHhhhhhhcccCCccCCCCeeEEEecCCCccceeeecceeecc
Q 014312 316 APIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASDARLGGEVKAQPVEVNVVSHAIQRYAVWFGGSVLAS 395 (427)
Q Consensus 316 ~~~d~r~~l~~nIil~GG~s~i~G~~eRL~~eL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~W~Ggsilas 395 (427)
++. +....++|+|+||+|.+||+.++|++++.. .+....+|.+++|+||+++|+
T Consensus 327 ~~~--~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~------------------------~v~~~~~p~~ava~Gaa~~a~ 380 (383)
T 1dkg_D 327 AGL--SVSDIDDVILVGGQTRMPMVQKKVAEFFGK------------------------EPRKDVNPDEAVAIGAAVQGG 380 (383)
T ss_dssp TTC--CTTTCCEEEEESGGGGSHHHHHHHHHHHSS------------------------CCBCSSCTTTHHHHHHHHHTT
T ss_pred cCC--CHhhCCEEEEecCccccHHHHHHHHHHhCC------------------------CCCCCcChHHHHHHHHHHHHH
Confidence 753 334568999999999999999999988731 122355788999999999987
Q ss_pred c
Q 014312 396 T 396 (427)
Q Consensus 396 l 396 (427)
+
T Consensus 381 ~ 381 (383)
T 1dkg_D 381 V 381 (383)
T ss_dssp T
T ss_pred h
Confidence 4
No 12
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.81 E-value=5.5e-20 Score=181.82 Aligned_cols=226 Identities=18% Similarity=0.122 Sum_probs=145.7
Q ss_pred CceeEEEeCCCCCHHHHHHHHHHhhhccCCCeEEEechhhhhhhhccCCC-CCcceEEEEEcCCCceEEEEee--cceec
Q 014312 119 DHYFLLTESPLTAPESREYTGEIMFETFNVPGLYIAVNSVLALAAGYTTS-KCEMTGVVVDVGDGATYVVPVA--EGYVI 195 (427)
Q Consensus 119 ~~~vll~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~lal~~~g~~~-~~~~tglVVDiG~~~t~v~pV~--dG~~l 195 (427)
-..++++.|..++...|+.+.+.+ +..|++.+.++.+|.+|+++++... +...+-+|+|+|.++|+++.+- ++...
T Consensus 153 ~~~~vitvP~~~~~~~r~~~~~a~-~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~ 231 (394)
T 3qfu_A 153 VTHAVVTVPAYFNDAQRQATKDAG-TIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFE 231 (394)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEEE
T ss_pred cceEEEEECCCCCHHHHHHHHHHH-HHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEEE
Confidence 357999999999999999888776 8899999999999999999886432 1244569999999999887763 44322
Q ss_pred ccC-ceEeccchHHHHHHHHHHHHhc-----CCCCCCcc-----hHHHHHHhhhhcCcccccHHHHHhhccCCCccccce
Q 014312 196 GSS-IKSIPIAGKDVTLFIQQLMRER-----GENVPPED-----SFEVARKVKEMYCYTCSDIVKEYNKHDKEPSKYLKQ 264 (427)
Q Consensus 196 ~~~-~~~~~~gG~~l~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~iKe~~c~v~~d~~~e~~~~~~~~~~~~~~ 264 (427)
..+ ....++||.++++.|.+.+.++ +..+.... -...++.+|+.+.... ...
T Consensus 232 ~~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~-----------------~~~ 294 (394)
T 3qfu_A 232 VQATSGDTHLGGEDFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQM-----------------STR 294 (394)
T ss_dssp EEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCS-----------------EEE
T ss_pred EEEEcCCCCCChHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCC-----------------cEE
Confidence 222 2337899999999998887432 22221100 0123444554432110 011
Q ss_pred eeccCCCCCCceEEeecceeeecccccccCCCCCCCCCCChHHHHHHHHHhCChhhHHHhhcCeEEecCccCcccHHHHH
Q 014312 265 WRGIKPKTGAPYSCDIGYERFLGPEVFFNPEIYSSDFTTPLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKDFHRRL 344 (427)
Q Consensus 265 ~~~~~~~~g~~~~i~i~~er~~~~E~LF~P~~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~~nIil~GG~s~i~G~~eRL 344 (427)
+.++....|....+.++.+.| |-+|.|. ...+.+.|.++|+++..+ ....++|+|+||+|.+|++.++|
T Consensus 295 ~~~~~~~~~~~~~~~i~r~~~---~~~~~~~------~~~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~l~~~l 363 (394)
T 3qfu_A 295 IEIDSFVDGIDLSETLTRAKF---EELNLDL------FKKTLKPVEKVLQDSGLE--KKDVDDIVLVGGSTRIPKVQQLL 363 (394)
T ss_dssp EEEEEEETTEEEEEEEEHHHH---HHHHHHH------HHHTHHHHHHHHHHHTCC--GGGCCEEEEESGGGGSHHHHHHH
T ss_pred EEEEeccCCceeEEEEEHHHH---HHHHHHH------HHHHHHHHHHHHHHcCCC--HHHCCEEEEECCccccHHHHHHH
Confidence 111100013222344443333 2333332 124677788888776554 44568999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhcccCCccCCCCeeEEEecCCCccceeeecceeeccc
Q 014312 345 QRDLKKIVDARVLASDARLGGEVKAQPVEVNVVSHAIQRYAVWFGGSVLAST 396 (427)
Q Consensus 345 ~~eL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~W~Ggsilasl 396 (427)
++.+... ++....+|..++|+||+++|.+
T Consensus 364 ~~~~~~~-----------------------~v~~~~~p~~ava~Gaa~~a~~ 392 (394)
T 3qfu_A 364 ESYFDGK-----------------------KASKGINPDEAVAYGAAVQAGV 392 (394)
T ss_dssp HHHTTTC-----------------------CCBCCSCTTTHHHHHHHHHHHH
T ss_pred HHHcCCC-----------------------CCCCCcCHHHHHHHHHHHHHHh
Confidence 9877211 1233457889999999999864
No 13
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.76 E-value=2.3e-18 Score=170.85 Aligned_cols=226 Identities=19% Similarity=0.187 Sum_probs=145.3
Q ss_pred CceeEEEeCCCCCHHHHHHHHHHhhhccCCCeEEEechhhhhhhhccCCCC----CcceEEEEEcCCCceEEEEee--cc
Q 014312 119 DHYFLLTESPLTAPESREYTGEIMFETFNVPGLYIAVNSVLALAAGYTTSK----CEMTGVVVDVGDGATYVVPVA--EG 192 (427)
Q Consensus 119 ~~~vll~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~lal~~~g~~~~----~~~tglVVDiG~~~t~v~pV~--dG 192 (427)
-..++++.|..++...|+.+.+. ++..|++.+.++.+|.+|+++++...+ ...+-+|+|+|.++|+++.+- +|
T Consensus 158 ~~~~vitvPa~~~~~~r~~~~~a-~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~ 236 (404)
T 3i33_A 158 VHSAVITVPAYFNDSQRQATKDA-GTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDG 236 (404)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHH-HHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETT
T ss_pred CCcEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCC
Confidence 35799999999999999888776 788999999999999999998875432 245679999999999998773 43
Q ss_pred ee-cccCceEeccchHHHHHHHHHHHHhc-----CCCCCCcc-----hHHHHHHhhhhcCcccccHHHHHhhccCCCccc
Q 014312 193 YV-IGSSIKSIPIAGKDVTLFIQQLMRER-----GENVPPED-----SFEVARKVKEMYCYTCSDIVKEYNKHDKEPSKY 261 (427)
Q Consensus 193 ~~-l~~~~~~~~~gG~~l~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~iKe~~c~v~~d~~~e~~~~~~~~~~~ 261 (427)
.. +.......++||.++++.|.+.+.++ +..+.... -...++++|+.+....
T Consensus 237 ~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~----------------- 299 (404)
T 3i33_A 237 IFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSST----------------- 299 (404)
T ss_dssp EEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSS-----------------
T ss_pred eEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCc-----------------
Confidence 32 22223347899999999998887432 22222110 0134555555443210
Q ss_pred cceeeccCCCCCCceEEeecceeeecccccccCCCCCCCCCCChHHHHHHHHHhCChhhHHHhhcCeEEecCccCcccHH
Q 014312 262 LKQWRGIKPKTGAPYSCDIGYERFLGPEVFFNPEIYSSDFTTPLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKDFH 341 (427)
Q Consensus 262 ~~~~~~~~~~~g~~~~i~i~~er~~~~E~LF~P~~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~~nIil~GG~s~i~G~~ 341 (427)
.....++....|....+.++.+.| |-+|.|. ...+.+.|.++|..+..+ ....+.|+|+||+|.+|++.
T Consensus 300 ~~~~~~~~~~~g~~~~~~i~r~~~---~~~~~~~------~~~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~l~ 368 (404)
T 3i33_A 300 QASIEIDSLYEGVDFYTSITRARF---EELNADL------FRGTLEPVEKALRDAKLD--KGQIQEIVLVGGSTRIPKIQ 368 (404)
T ss_dssp EEEEEEEEEETTEEEEEEEEHHHH---HHHTHHH------HHHTHHHHHHHHHHHTCC--GGGCCEEEEESGGGGCHHHH
T ss_pred ceEEEEeeccCCceeEEEEcHHHH---HHHHHHH------HHHHHHHHHHHHHHcCCC--HhhCCEEEEECCccccHHHH
Confidence 011111100013323344443333 2333332 124667777777765432 34458899999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhcccCCccCCCCeeEEEecCCCccceeeecceeeccc
Q 014312 342 RRLQRDLKKIVDARVLASDARLGGEVKAQPVEVNVVSHAIQRYAVWFGGSVLAST 396 (427)
Q Consensus 342 eRL~~eL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~W~Ggsilasl 396 (427)
++|++.+... ++....+|..+.++||+++|.+
T Consensus 369 ~~l~~~~~~~-----------------------~v~~~~~p~~ava~Gaa~~a~~ 400 (404)
T 3i33_A 369 KLLQDFFNGK-----------------------ELNKSINPDEAVAYGAAVQAAI 400 (404)
T ss_dssp HHHHHHTTTC-----------------------CCBCSSCTTTHHHHHHHHHHHH
T ss_pred HHHHHHcCCC-----------------------CCCCCcCHHHHHHHHHHHHHHH
Confidence 9998876211 1233457889999999999864
No 14
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=99.68 E-value=1.3e-15 Score=156.54 Aligned_cols=224 Identities=17% Similarity=0.165 Sum_probs=146.4
Q ss_pred ceeEEEeCCCCCHHHHHHHHHHhhhccCCCeEEEechhhhhhhhccCCCC--CcceEEEEEcCCCceEEEEee--ccee-
Q 014312 120 HYFLLTESPLTAPESREYTGEIMFETFNVPGLYIAVNSVLALAAGYTTSK--CEMTGVVVDVGDGATYVVPVA--EGYV- 194 (427)
Q Consensus 120 ~~vll~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~lal~~~g~~~~--~~~tglVVDiG~~~t~v~pV~--dG~~- 194 (427)
..++++.|..++..+|+.+.+ .++..|++.+.++.+|.+|+++++.... ...+.+|+|+|+++++++.+. +|..
T Consensus 140 ~~~VitVPa~f~~~qr~a~~~-A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~ 218 (554)
T 1yuw_A 140 TNAVVTVPAYFNDSQRQATKD-AGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFE 218 (554)
T ss_dssp CEEEEEECTTCCHHHHHHHHH-HHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEE
T ss_pred CeEEEEECCCCCHHHHHHHHH-HHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEE
Confidence 469999999999999988877 5678899999999999999988875321 246789999999999999875 5753
Q ss_pred cccCceEeccchHHHHHHHHHHHHh-----cCCCCCCcc-----hHHHHHHhhhhcCcccccHHHHHhhccCCCccccce
Q 014312 195 IGSSIKSIPIAGKDVTLFIQQLMRE-----RGENVPPED-----SFEVARKVKEMYCYTCSDIVKEYNKHDKEPSKYLKQ 264 (427)
Q Consensus 195 l~~~~~~~~~gG~~l~~~l~~~l~~-----~~~~~~~~~-----~~~~~~~iKe~~c~v~~d~~~e~~~~~~~~~~~~~~ 264 (427)
+........+||+++++.|.+.+.. .+..+.... -...+|.+|+.++.... ..
T Consensus 219 v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~-----------------~~ 281 (554)
T 1yuw_A 219 VKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQ-----------------AS 281 (554)
T ss_dssp EEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSE-----------------EE
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCce-----------------EE
Confidence 2223344689999999998887753 233332110 12456777776553210 11
Q ss_pred eeccCCCCCCceEEeecceeeecccccccCCCCCCCCCCChHHHHHHHHHhCChhhHHHhhcCeEEecCccCcccHHHHH
Q 014312 265 WRGIKPKTGAPYSCDIGYERFLGPEVFFNPEIYSSDFTTPLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKDFHRRL 344 (427)
Q Consensus 265 ~~~~~~~~g~~~~i~i~~er~~~~E~LF~P~~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~~nIil~GG~s~i~G~~eRL 344 (427)
..++....|....+.++.+.| |-++.|-+ ..+.+.|.+++..+.. ...-.+.|+|+||+|.+|++.++|
T Consensus 282 i~i~~~~~g~~~~~~ltr~~~---e~l~~~~~------~~i~~~i~~~L~~a~~--~~~~i~~VvLvGG~srip~v~~~l 350 (554)
T 1yuw_A 282 IEIDSLYEGIDFYTSITRARF---EELNADLF------RGTLDPVEKALRDAKL--DKSQIHDIVLVGGSTRIPKIQKLL 350 (554)
T ss_dssp EEETTCSSSCCEEEEEEHHHH---HHHTHHHH------HHTTHHHHHHHHHTTC--CGGGCCEEEEESGGGGCHHHHHHH
T ss_pred EEEeeccCCceEEEEEEHHHH---HHHHHHHH------HHHHHHHHHHHHHcCC--ChhhCcEEEEECCcccChHHHHHH
Confidence 222211114333444544333 22333311 1355667777765532 223458999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhcccCCccCCCCeeEEEecCCCccceeeecceeecc
Q 014312 345 QRDLKKIVDARVLASDARLGGEVKAQPVEVNVVSHAIQRYAVWFGGSVLAS 395 (427)
Q Consensus 345 ~~eL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~W~Ggsilas 395 (427)
++.+... .+....+|..+.+.||+++|.
T Consensus 351 ~~~f~~~-----------------------~v~~~~np~~aVA~Gaa~~a~ 378 (554)
T 1yuw_A 351 QDFFNGK-----------------------ELNKSINPDEAVAYGAAVQAA 378 (554)
T ss_dssp HHHTTTC-----------------------CCBCCSCTTTHHHHHHHHHHH
T ss_pred HHHcCCC-----------------------ccccCCCchhHHHHHHHHHHH
Confidence 8766311 112345677899999999886
No 15
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=99.61 E-value=9.5e-15 Score=151.65 Aligned_cols=224 Identities=15% Similarity=0.081 Sum_probs=146.0
Q ss_pred ceeEEEeCCCCCHHHHHHHHHHhhhccCCCeEEEechhhhhhhhccCCCC-CcceEEEEEcCCCceEEEEee------cc
Q 014312 120 HYFLLTESPLTAPESREYTGEIMFETFNVPGLYIAVNSVLALAAGYTTSK-CEMTGVVVDVGDGATYVVPVA------EG 192 (427)
Q Consensus 120 ~~vll~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~lal~~~g~~~~-~~~tglVVDiG~~~t~v~pV~------dG 192 (427)
..++++.|..++..+|+.+.+. .+..|+..+.++++|.+|+++++...+ ...+.+|+|+|+++++|+.+. +|
T Consensus 136 ~~~VitVPa~f~d~qr~a~~~A-~~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g 214 (605)
T 2kho_A 136 TEAVITVPAYFNDAQRQATKDA-GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEK 214 (605)
T ss_dssp CEEEEEECTTCCHHHHHHHHHH-HHTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTSC
T ss_pred cEEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCCC
Confidence 4689999999999999888776 467899999999999999988875421 245689999999999999885 34
Q ss_pred eec-ccCceEeccchHHHHHHHHHHHHhc-----CCCCCCc-c----hHHHHHHhhhhcCcccccHHHHHhhccCCCccc
Q 014312 193 YVI-GSSIKSIPIAGKDVTLFIQQLMRER-----GENVPPE-D----SFEVARKVKEMYCYTCSDIVKEYNKHDKEPSKY 261 (427)
Q Consensus 193 ~~l-~~~~~~~~~gG~~l~~~l~~~l~~~-----~~~~~~~-~----~~~~~~~iKe~~c~v~~d~~~e~~~~~~~~~~~ 261 (427)
..- ..+....++||.++++.|.+.+.++ +..+... . -...+|.+|+.++....
T Consensus 215 ~~~v~a~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~---------------- 278 (605)
T 2kho_A 215 TFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQ---------------- 278 (605)
T ss_dssp EEEEEEEEEESSCSGGGTHHHHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSE----------------
T ss_pred eEEEEEECCCCCccHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCc----------------
Confidence 321 1122346899999999998877543 4333221 0 12456777776653210
Q ss_pred cceeeccC---CCCC-CceEEeecceeeecccccccCCCCCCCCCCChHHHHHHHHHhCChhhHHHhhcCeEEecCccCc
Q 014312 262 LKQWRGIK---PKTG-APYSCDIGYERFLGPEVFFNPEIYSSDFTTPLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMF 337 (427)
Q Consensus 262 ~~~~~~~~---~~~g-~~~~i~i~~er~~~~E~LF~P~~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~~nIil~GG~s~i 337 (427)
....++. ..+| ....+.++.+.| |-+|.|-+ ..+.+.|.+++..+.. ...-.+.|+|+||+|.+
T Consensus 279 -~~i~l~~~~~~~~G~~~~~~~itr~~f---e~l~~~~~------~~i~~~i~~~L~~a~~--~~~~i~~VvLvGG~sri 346 (605)
T 2kho_A 279 -TDVNLPYITADATGPKHMNIKVTRAKL---ESLVEDLV------NRSIEPLKVALQDAGL--SVSDIDDVILVGGQTRM 346 (605)
T ss_dssp -EEEEEEEEEEETTEEEEEEEEEEHHHH---HTTCCSTT------GGGTSHHHHHHHTTTC--CTTTCSEEEEESGGGGS
T ss_pred -eEEEecccccCCCCceEEEEEEeHHHH---HHHHHHHH------HHHHHHHHHHHHHcCC--ChhhCceEEEECCcccC
Confidence 0111110 0002 111233433333 34555432 3467778888877642 22334789999999999
Q ss_pred ccHHHHHHHHHHHHHHHhhhhhhcccCCccCCCCeeEEEecCCCccceeeecceeeccc
Q 014312 338 KDFHRRLQRDLKKIVDARVLASDARLGGEVKAQPVEVNVVSHAIQRYAVWFGGSVLAST 396 (427)
Q Consensus 338 ~G~~eRL~~eL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~W~Ggsilasl 396 (427)
|++.++|++.+... +....+|..++++||+++|..
T Consensus 347 p~v~~~l~~~fg~~------------------------~~~~~npd~aVA~GAa~~a~~ 381 (605)
T 2kho_A 347 PMVQKKVAEFFGKE------------------------PRKDVNPDEAVAIGAAVQGGV 381 (605)
T ss_dssp HHHHHHHHHHHSSC------------------------CBCSSCTTTHHHHHHHHHHTT
T ss_pred hHHHHHHHHhcCCC------------------------cCcCCCcchHHHHHHHHHHHH
Confidence 99999998777310 122446778999999998863
No 16
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=99.54 E-value=1.2e-14 Score=144.19 Aligned_cols=228 Identities=11% Similarity=0.061 Sum_probs=138.8
Q ss_pred CceeEEEeCCCCCHHHHHHHHHHhhhccCCCeEEEechhhhhhhhccCCC---CCcceEEEEEcCCCceEEEEe--ecce
Q 014312 119 DHYFLLTESPLTAPESREYTGEIMFETFNVPGLYIAVNSVLALAAGYTTS---KCEMTGVVVDVGDGATYVVPV--AEGY 193 (427)
Q Consensus 119 ~~~vll~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~lal~~~g~~~---~~~~tglVVDiG~~~t~v~pV--~dG~ 193 (427)
...++++.|..+....|+.+.+. .+..|+..+.++.+|.+|+++++... +...+.+|+|+|.++|+++-+ .+|.
T Consensus 150 ~~~~vitvPa~~~~~~r~~~~~a-~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~~~ 228 (409)
T 4gni_A 150 VTSAVITIPTNFTEKQKAALIAA-AAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRSGM 228 (409)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEETTE
T ss_pred CCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEeCCe
Confidence 45699999999998888877665 46679999999999999999887431 224578999999999999875 3332
Q ss_pred ecccC-ceEeccchHHHHHHHHHHHHhcCC---C--CCCcchH-------HHHHHhhhhcCcccccHHHHHhhccCCCcc
Q 014312 194 VIGSS-IKSIPIAGKDVTLFIQQLMRERGE---N--VPPEDSF-------EVARKVKEMYCYTCSDIVKEYNKHDKEPSK 260 (427)
Q Consensus 194 ~l~~~-~~~~~~gG~~l~~~l~~~l~~~~~---~--~~~~~~~-------~~~~~iKe~~c~v~~d~~~e~~~~~~~~~~ 260 (427)
.-.-+ ....++||.++++.|.+.+..... . ....... ..+|.+|+.+...
T Consensus 229 ~~v~~~~~~~~lGG~~~d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~----------------- 291 (409)
T 4gni_A 229 YTILATVHDYEYHGIALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRS----------------- 291 (409)
T ss_dssp EEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHS-----------------
T ss_pred EEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCC-----------------
Confidence 11111 123689999999999888764311 0 1111111 2345555543210
Q ss_pred ccceeeccCCCCCCceEEeecceeeecccccccCCCCCCCCCCChHHHHHHHHHhCChhhHHHhhcCeEEecCccCcccH
Q 014312 261 YLKQWRGIKPKTGAPYSCDIGYERFLGPEVFFNPEIYSSDFTTPLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKDF 340 (427)
Q Consensus 261 ~~~~~~~~~~~~g~~~~i~i~~er~~~~E~LF~P~~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~~nIil~GG~s~i~G~ 340 (427)
......++....|....+.++.+.| |-+|.|. ...+.++|.+++..... .....+.|+|+||+|.+|++
T Consensus 292 ~~~~i~i~~~~~~~~~~~~itr~~~---~~~~~~~------~~~i~~~i~~~l~~~~~--~~~~i~~V~LvGG~s~~p~v 360 (409)
T 4gni_A 292 TNASFSVESLIDGLDFASTINRLRY---ETIARTV------FEGFNRLVESAVKKAGL--DPLDVDEVIMSGGTSNTPRI 360 (409)
T ss_dssp SEEEEEEEEEETTEEEEEEEEHHHH---HHHTHHH------HHHHHHHHHHHHHHTTC--CGGGCCEEEEESGGGGCHHH
T ss_pred CceEEEeecccCCcceEEEeeHHHH---HHHHHHH------HHHHHHHHHHHHHHcCC--CHHHCCEEEEECCccccHHH
Confidence 0011111100012222333333222 2333332 12466677777776532 23345789999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhcccCCccCCCCeeEEE------ecCCCccceeeecceeecccc
Q 014312 341 HRRLQRDLKKIVDARVLASDARLGGEVKAQPVEVNV------VSHAIQRYAVWFGGSVLASTP 397 (427)
Q Consensus 341 ~eRL~~eL~~~~~~~~~~~~~~~~~~~~~~~~~v~v------~~~~~~~~~~W~Ggsilasl~ 397 (427)
.++|++.+... ++| ....+|..+.=.||+++|...
T Consensus 361 ~~~l~~~f~~~----------------------~~v~~P~~~~~~~~p~~ava~GAa~~~~~~ 401 (409)
T 4gni_A 361 AANFRYIFPES----------------------TRILAPSTDPSALNPSELQARGAALQASLI 401 (409)
T ss_dssp HHHHHHHSCTT----------------------SEEESTTTCTTCCCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCc----------------------cccccccccCCCcCHHHHHHHHHHHHhhhh
Confidence 99998776321 122 223467788889999998754
No 17
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=99.52 E-value=1.2e-13 Score=144.75 Aligned_cols=223 Identities=13% Similarity=0.143 Sum_probs=142.5
Q ss_pred ceeEEEeCCCCCHHHHHHHHHHhhhccCCCeEEEechhhhhhhhccCCC-------CCcceEEEEEcCCCceEEEEee--
Q 014312 120 HYFLLTESPLTAPESREYTGEIMFETFNVPGLYIAVNSVLALAAGYTTS-------KCEMTGVVVDVGDGATYVVPVA-- 190 (427)
Q Consensus 120 ~~vll~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~lal~~~g~~~-------~~~~tglVVDiG~~~t~v~pV~-- 190 (427)
..++++.|..++...|+.+.+. .+..|++.+.++++|.+|++++|... +...+.+|+|+|+++++|+.+.
T Consensus 139 ~~~VITVPa~f~~~qR~a~~~A-a~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~ 217 (675)
T 3d2f_A 139 TDVCIAVPPWYTEEQRYNIADA-ARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFK 217 (675)
T ss_dssp CEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEE
T ss_pred ceEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEec
Confidence 4699999999999999888875 46789999999999999988775311 1245789999999999999874
Q ss_pred ccee-cccCceEeccchHHHHHHHHHHHHh-----cCCCCCCc-c----hHHHHHHhhhhcCcccccHHHHHhhccCCCc
Q 014312 191 EGYV-IGSSIKSIPIAGKDVTLFIQQLMRE-----RGENVPPE-D----SFEVARKVKEMYCYTCSDIVKEYNKHDKEPS 259 (427)
Q Consensus 191 dG~~-l~~~~~~~~~gG~~l~~~l~~~l~~-----~~~~~~~~-~----~~~~~~~iKe~~c~v~~d~~~e~~~~~~~~~ 259 (427)
+|.. +........+||+++++.|.+.+.. .+..+... . -...++.+|+.++...
T Consensus 218 ~g~~~V~a~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~--------------- 282 (675)
T 3d2f_A 218 KGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANT--------------- 282 (675)
T ss_dssp TTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCS---------------
T ss_pred CCeEEEEEEcCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCC---------------
Confidence 6654 2223334689999999999888753 23322110 0 1245667776554211
Q ss_pred cccceeeccCCCCCCceEEeecceeeecccccccCCCCCCCCCCChHHHHHHHHHhCChhhHHHhhcCeEEecCccCccc
Q 014312 260 KYLKQWRGIKPKTGAPYSCDIGYERFLGPEVFFNPEIYSSDFTTPLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKD 339 (427)
Q Consensus 260 ~~~~~~~~~~~~~g~~~~i~i~~er~~~~E~LF~P~~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~~nIil~GG~s~i~G 339 (427)
.....++....|....+.++.+.| |-++.|- ...+.+.|.+++...... ..-...|+|+||+|.+|+
T Consensus 283 --~~~i~i~~~~~g~~~~~~itr~~f---e~l~~~l------~~~i~~~i~~~L~~a~l~--~~~I~~VvLvGGssriP~ 349 (675)
T 3d2f_A 283 --NAPFSVESVMNDVDVSSQLSREEL---EELVKPL------LERVTEPVTKALAQAKLS--AEEVDFVEIIGGTTRIPT 349 (675)
T ss_dssp --EEEEEETTSSSSCCEEEEEEHHHH---HHHTHHH------HTTTTHHHHHHHHHHTCC--GGGCCEEEEESGGGGSHH
T ss_pred --ceEEEEeeeccCceEEEEEeHHHH---HHHHHHH------HHHHHHHHHHHHHHhCCC--hhhCcEEEEECCCccChH
Confidence 011112111113333455554443 2233331 124666777777654321 123478999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcccCCccCCCCeeEEEecCCCccceeeecceeecc
Q 014312 340 FHRRLQRDLKKIVDARVLASDARLGGEVKAQPVEVNVVSHAIQRYAVWFGGSVLAS 395 (427)
Q Consensus 340 ~~eRL~~eL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~W~Ggsilas 395 (427)
+.++|++.+.. . +....+|..++.+||+++|.
T Consensus 350 v~~~l~~~fg~----------------------~--~~~~~nPdeaVA~GAa~~a~ 381 (675)
T 3d2f_A 350 LKQSISEAFGK----------------------P--LSTTLNQDEAIAKGAAFICA 381 (675)
T ss_dssp HHHHHHHHHTS----------------------C--EECCSCTTTHHHHHHHHHHH
T ss_pred HHHHHHHhcCC----------------------C--ccccCCcchHHHHHHHHHHH
Confidence 99999877731 1 12244667788888888775
No 18
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.47 E-value=1.4e-12 Score=127.93 Aligned_cols=177 Identities=16% Similarity=0.120 Sum_probs=108.6
Q ss_pred HHHHHHHhhhccCCCeEEEechhhhhhhhccCCC--CCcceEEEEEcCCCceEEEEeecceecccCceEeccchHHHHHH
Q 014312 135 REYTGEIMFETFNVPGLYIAVNSVLALAAGYTTS--KCEMTGVVVDVGDGATYVVPVAEGYVIGSSIKSIPIAGKDVTLF 212 (427)
Q Consensus 135 r~~l~e~lfe~~~~~~v~~~~~~~lal~~~g~~~--~~~~tglVVDiG~~~t~v~pV~dG~~l~~~~~~~~~gG~~l~~~ 212 (427)
.+.+.+ +++..|+.-..+..+|++++.+++... ......+|||+|+++|+++.+.+|.+.. ....++||.++++.
T Consensus 153 v~~~~~-~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~~--~~~~~~GG~~i~~~ 229 (377)
T 2ych_A 153 VAGVLE-ALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLA--VRVLTLSGKDFTEA 229 (377)
T ss_dssp HHHHHH-HHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEEE--EEEESCSHHHHHHH
T ss_pred HHHHHH-HHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEEE--EEeeechHHHHHHH
Confidence 344443 457889999999999999888764210 0123469999999999999999998874 46689999999999
Q ss_pred HHHHHHhcCCCCCCcchHHHHHHhhhhcCcccccHHHHHhhccCCCccccceeeccCCCCCCceEEeecceeeecccccc
Q 014312 213 IQQLMRERGENVPPEDSFEVARKVKEMYCYTCSDIVKEYNKHDKEPSKYLKQWRGIKPKTGAPYSCDIGYERFLGPEVFF 292 (427)
Q Consensus 213 l~~~l~~~~~~~~~~~~~~~~~~iKe~~c~v~~d~~~e~~~~~~~~~~~~~~~~~~~~~~g~~~~i~i~~er~~~~E~LF 292 (427)
+.+.+ + .+.+.+|++|+++++...+..++. ..+.++ +. .+.++.+.+ .|++
T Consensus 230 i~~~~---~------~~~~~aE~~K~~~~~~~~~~~~~~-----------~~i~~~----~~--~~~i~~~~~--~~~i- 280 (377)
T 2ych_A 230 IARSF---N------LDLLAAEEVKRTYGMATLPTEDEE-----------LLLDFD----AE--RERYSPGRI--YDAI- 280 (377)
T ss_dssp HHHHT---T------CCHHHHHHHHHHTC------------------------------------------CH--HHHH-
T ss_pred HHHHh---C------CCHHHHHHHHhhcccccccccccc-----------cccccc----cc--cccCCHHHH--HHHH-
Confidence 88732 1 346789999998886543211110 001111 00 112221111 1111
Q ss_pred cCCCCCCCCCCChHHHHHHHHHhCChhhHHHhhcCeEEecCccCcccHHHHHHHHHH
Q 014312 293 NPEIYSSDFTTPLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLK 349 (427)
Q Consensus 293 ~P~~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~~nIil~GG~s~i~G~~eRL~~eL~ 349 (427)
.|. ...+.+.|.++++.++...+....++|+|+||+|++||+.++|++++.
T Consensus 281 ~~~------~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~ 331 (377)
T 2ych_A 281 RPV------LVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLG 331 (377)
T ss_dssp HHH------HHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHT
T ss_pred HHH------HHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhC
Confidence 110 123566666676655555556678899999999999999999998885
No 19
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.42 E-value=3.3e-13 Score=130.64 Aligned_cols=196 Identities=17% Similarity=0.070 Sum_probs=129.3
Q ss_pred CcEEEeCCCccEEEEEcCCCCCceeeeeeEEeeccccccccccchhhhhhh-hccC-CCCCCCeEEccccccccCCCCCc
Q 014312 7 PAVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQ-YNAG-VMADLDFFIGDEAVTKSRSSSTY 84 (427)
Q Consensus 7 ~~vVlD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~vg~~~~~~~~~~~~~ 84 (427)
-.+-||+|+.++|+-. ++ .-.+.+||+++........ - ..+ .|... .... ......+.||++|.
T Consensus 22 ~~igiDlG~~~tkv~~-~~-g~~~~~PSvva~~~~~~~~-~-~~~-~~v~~~~g~~~~~~~~~~~vG~~A~--------- 87 (346)
T 2fsj_A 22 VVVGLDVGYGDTKVIG-VD-GKRIIFPSRWAVTETESWG-I-GGK-IPVLSTDGGQTKFIYGKYASGNNIR--------- 87 (346)
T ss_dssp EEEEEEECSSEEEEEC-GG-GCEEEEESCEEEECCSCC------C-CCCBBSSTTSSEEEEGGGCCSSCCB---------
T ss_pred EEEEEecCCcceeEEe-cC-CCEEEecceeeeccccccC-c-Ccc-eEEEEecccccccCCcEEEEcccee---------
Confidence 3589999999999864 33 2356899999887431100 0 000 00000 0000 00124567776653
Q ss_pred EEeCcccCCccCCHHHHHHHHHHHHhhcc-CCCCCCceeE--EEeCCCCCHHHHHHHHHHhhhc-------------cCC
Q 014312 85 NLSYPIRHGQVDNWDAMERYWQQCIFNYL-RCDPEDHYFL--LTESPLTAPESREYTGEIMFET-------------FNV 148 (427)
Q Consensus 85 ~~~~Pi~~G~i~d~~~~e~i~~~~l~~~L-~~~~~~~~vl--l~e~~~~~~~~r~~l~e~lfe~-------------~~~ 148 (427)
+|+++|.+.| +..+.++.+.+.+.. ........++ ++.|......+|+.+.+.+... +++
T Consensus 88 ---~~l~~~~~~~-~~~~~ll~~~l~~~~~~~~~~~~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v 163 (346)
T 2fsj_A 88 ---VPQGDGRLAS-KEAFPLIAAALWESGIHNDGSPVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNI 163 (346)
T ss_dssp ---CCSSTTCTTS-TTTHHHHHHHHHHHCCCC---CEEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEE
T ss_pred ---cccCCCcccC-hhHHHHHHHHHHHhhhccCCCceEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEE
Confidence 6899999998 788888888876643 1112345688 8899877777788887775542 235
Q ss_pred CeEEEechhhhhhhhc--cCCCC-CcceEEEEEcCCCceEEEEee--cceecccCceEeccchHHHHHHHHHHHHhc
Q 014312 149 PGLYIAVNSVLALAAG--YTTSK-CEMTGVVVDVGDGATYVVPVA--EGYVIGSSIKSIPIAGKDVTLFIQQLMRER 220 (427)
Q Consensus 149 ~~v~~~~~~~lal~~~--g~~~~-~~~tglVVDiG~~~t~v~pV~--dG~~l~~~~~~~~~gG~~l~~~l~~~l~~~ 220 (427)
..+.++++|.+|++++ +...+ ...+-+|||+|.++|+++.+. +|.++......+++||+++++.+.+.++++
T Consensus 164 ~~v~li~Ep~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~I~~~i~~~ 240 (346)
T 2fsj_A 164 TRLIMRPQGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAKE 240 (346)
T ss_dssp EEEEEEETTHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEccHHHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchhHHHHHHHHHHHHHHH
Confidence 6789999999998874 21100 123459999999999999998 787666556778999999999998877654
No 20
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=99.35 E-value=2.4e-11 Score=126.10 Aligned_cols=204 Identities=13% Similarity=0.078 Sum_probs=118.9
Q ss_pred ceeEEEeCCCCCHHHHHHHHHHhhhccCCCeEEEechhhhhhhhccCCC-CCcceEEEEEcCCCceEEEEeecce-----
Q 014312 120 HYFLLTESPLTAPESREYTGEIMFETFNVPGLYIAVNSVLALAAGYTTS-KCEMTGVVVDVGDGATYVVPVAEGY----- 193 (427)
Q Consensus 120 ~~vll~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~lal~~~g~~~-~~~~tglVVDiG~~~t~v~pV~dG~----- 193 (427)
..++++.|..++...|+.+.+. .+..|++.+.++++|.+|++++|... +...+-+|+|+|.++++++.+.-+.
T Consensus 136 ~~~VITVPa~f~~~qr~a~~~A-a~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~ 214 (605)
T 4b9q_A 136 TEAVITVPAYFNDAQRQATKDA-GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEK 214 (605)
T ss_dssp CEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCE
T ss_pred CeEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCc
Confidence 4689999999999988776655 56689999999999999998887542 1235678999999999999774332
Q ss_pred -e-cccCceEeccchHHHHHHHHHHHHhc-----CCCCCCcc-----hHHHHHHhhhhcCcccccHHHHHhhccCCCccc
Q 014312 194 -V-IGSSIKSIPIAGKDVTLFIQQLMRER-----GENVPPED-----SFEVARKVKEMYCYTCSDIVKEYNKHDKEPSKY 261 (427)
Q Consensus 194 -~-l~~~~~~~~~gG~~l~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~iKe~~c~v~~d~~~e~~~~~~~~~~~ 261 (427)
. +........+||.++++.|.+.+... +..+.... -...++.+|+.+...... ..
T Consensus 215 ~~evla~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~-------------~i 281 (605)
T 4b9q_A 215 TFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQT-------------DV 281 (605)
T ss_dssp EEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEE-------------EE
T ss_pred eEEEEEecCCCCcChHHHHHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCe-------------EE
Confidence 1 11112235789999999988877642 22221100 023455556544321100 00
Q ss_pred cceeeccCCCCCCceEEeecceeeecccccccCCCCCCCCCCChHHHHHHHHHhCChhhHHHhhcCeEEecCccCcccHH
Q 014312 262 LKQWRGIKPKTGAPYSCDIGYERFLGPEVFFNPEIYSSDFTTPLPAVIDKCIQSAPIDTRRALYKNIVLSGGSTMFKDFH 341 (427)
Q Consensus 262 ~~~~~~~~~~~g~~~~i~i~~er~~~~E~LF~P~~~~~~~~~~l~~~i~~~i~~~~~d~r~~l~~nIil~GG~s~i~G~~ 341 (427)
...+...+...+....+.++.+.| |-+|.|- ...+.+.|.+++..... ...-.+.|+|+||+|.+|++.
T Consensus 282 ~~~~~~~~~~g~~~~~~~itr~~~---e~l~~~~------~~~i~~~v~~~L~~a~~--~~~~i~~VvLvGG~sriP~v~ 350 (605)
T 4b9q_A 282 NLPYITADATGPKHMNIKVTRAKL---ESLVEDL------VNRSIEPLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQ 350 (605)
T ss_dssp EEEEEEECSSSEEEEEEEEEHHHH---HHHHHHH------HHHTTHHHHHHHHHTTC--CGGGCSEEEEESGGGGSHHHH
T ss_pred EEeeeccCCCCCeeEEEEEeHHHH---HHHHHHH------HHHHHHHHHHHHHHcCC--CHHHCcEEEEeCCccCchHHH
Confidence 001111110001112233332221 2222221 01244555555554322 112347899999999999999
Q ss_pred HHHHHHH
Q 014312 342 RRLQRDL 348 (427)
Q Consensus 342 eRL~~eL 348 (427)
++|++.+
T Consensus 351 ~~l~~~f 357 (605)
T 4b9q_A 351 KKVAEFF 357 (605)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998776
No 21
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.31 E-value=3e-11 Score=119.63 Aligned_cols=182 Identities=14% Similarity=0.093 Sum_probs=114.1
Q ss_pred HHHHHHHHHHhhhccCCCeEEEechhhhhhhhccCCCCCcceEEEEEcCCCceEEEEeecceecccCceEeccchHHHHH
Q 014312 132 PESREYTGEIMFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATYVVPVAEGYVIGSSIKSIPIAGKDVTL 211 (427)
Q Consensus 132 ~~~r~~l~e~lfe~~~~~~v~~~~~~~lal~~~g~~~~~~~tglVVDiG~~~t~v~pV~dG~~l~~~~~~~~~gG~~l~~ 211 (427)
+..-+.+.+. ++..|+.-..+..+|+++++++........+.+|||+|+++|+++.+.+|.+.. ...+++||+++|+
T Consensus 167 ~~~v~n~~~~-~~~AGL~v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g~~~~--~~~i~~GG~~it~ 243 (419)
T 4a2a_A 167 LKVYEMFYNF-LQDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPIK--ISYVPVGMKHVIK 243 (419)
T ss_dssp HHHHHHHHHH-HHTTSCSCEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETTEEEE--EEEESCCHHHHHH
T ss_pred HHHHHHHHHH-HHHcCCcEEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEECCEEEE--EEecccHHHHHHH
Confidence 3444444444 577888888999999999887753211134689999999999999999999875 3568999999999
Q ss_pred HHHHHHHhcCCCCCCcchHHHHHHhhhhcCcccccHHHHHhhccCCCccccceeeccCCCCCCceEEeecceee-ecccc
Q 014312 212 FIQQLMRERGENVPPEDSFEVARKVKEMYCYTCSDIVKEYNKHDKEPSKYLKQWRGIKPKTGAPYSCDIGYERF-LGPEV 290 (427)
Q Consensus 212 ~l~~~l~~~~~~~~~~~~~~~~~~iKe~~c~v~~d~~~e~~~~~~~~~~~~~~~~~~~~~~g~~~~i~i~~er~-~~~E~ 290 (427)
.+.+.+. ...+.+|++|.++.....+. .......++.. .|. ....++.+.+ .+-+.
T Consensus 244 dIa~~l~---------~~~~~AE~iK~~~g~a~~~~------------~~~~~i~v~~~-~~~-~~~~is~~~l~~ii~p 300 (419)
T 4a2a_A 244 DVSAVLD---------TSFEESERLIITHGNAVYND------------LKEEEIQYRGL-DGN-TIKTTTAKKLSVIIHA 300 (419)
T ss_dssp HHHHHHT---------CCHHHHHHHHHHHCCSCCTT------------CCCCEEEEECT-TSC-SEEEEEHHHHHHHHHH
T ss_pred HHHHHHC---------CCHHHHHHHHHHhccCcccC------------CCCceEEEeec-CCc-cceEEcHHHHHHHHHH
Confidence 9987663 45678999999876532210 01112222211 121 1222221111 11111
Q ss_pred cccCCCCCCCCCCChHHHHHHHHHhCCh---hh-HHHhhcCeEEecCccCcccHHHHHHHHHH
Q 014312 291 FFNPEIYSSDFTTPLPAVIDKCIQSAPI---DT-RRALYKNIVLSGGSTMFKDFHRRLQRDLK 349 (427)
Q Consensus 291 LF~P~~~~~~~~~~l~~~i~~~i~~~~~---d~-r~~l~~nIil~GG~s~i~G~~eRL~~eL~ 349 (427)
.+ ..+.+.|.+.|+.... +. ...+.+.|+||||+|++||+.+.+++.+.
T Consensus 301 ~v----------eei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g 353 (419)
T 4a2a_A 301 RL----------REIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFK 353 (419)
T ss_dssp HH----------HHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHT
T ss_pred HH----------HHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHC
Confidence 11 1355566666665432 22 34567789999999999999999998874
No 22
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.00 E-value=9.3e-10 Score=105.56 Aligned_cols=197 Identities=13% Similarity=0.043 Sum_probs=120.2
Q ss_pred CCCCCCC-cEEEeCCCccEEEEEc--C---CCCCceeeeeeEEeeccccccccccchhhhhhhhccCCCCCCCeEEcccc
Q 014312 1 MDPTSRP-AVVIDNGTGYTKMGFA--G---NVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADLDFFIGDEA 74 (427)
Q Consensus 1 ~~~~~~~-~vVlD~Gs~~~k~G~a--g---~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~~~ 74 (427)
|+-|.+. .|-||+|-+++|+-.. + +..-+..|||.++......-. ...+ ...-......|+||+.+
T Consensus 1 ~~~~~~~~iigiD~G~~~~K~~~~~~~g~~~~~~~~~FpS~v~~~~~~~~~--~~~~------~~~v~~~G~~Y~vG~~a 72 (329)
T 4apw_A 1 MENITNEYVMTLDAGKYETKLIGKNKKGTTEDIKRVIFKTKIYNLEDGYID--IEGN------SHKIELDGKEYLIGEQG 72 (329)
T ss_dssp ----CCEEEEEEEECSSEEEEEEHHHHHHCCSSTTEEEESCCEECCEESCC--CCCS------CEEEECSSSEEEESCCS
T ss_pred CCCccCceEEEEecCCceEEEEeccCCCcccceeEEeeccccccccccccc--CCCC------ceEEEECCEEEEeCccc
Confidence 5556655 4689999999999763 2 122446899998875321100 0000 00112345678999876
Q ss_pred ccccCCCCCcEEeCcccCCccCCHHHHHHHHHHHHhhccCCC-CCCceeEEEeCCCCC--HHHHHHHHHHhhhc------
Q 014312 75 VTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCD-PEDHYFLLTESPLTA--PESREYTGEIMFET------ 145 (427)
Q Consensus 75 ~~~~~~~~~~~~~~Pi~~G~i~d~~~~e~i~~~~l~~~L~~~-~~~~~vll~e~~~~~--~~~r~~l~e~lfe~------ 145 (427)
.... ..... +-+....++..++...+... ..+..+++.-|...- .+.|+++.+.+-..
T Consensus 73 ~~~~-----------~~~~k--~~~~~~~L~l~Aia~~~~~~~~~~v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~ 139 (329)
T 4apw_A 73 VEDS-----------SETSK--TNLIHKLAAYTAITQVLDSNKNNKVQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVK 139 (329)
T ss_dssp SSCS-----------GGGCC--CTTHHHHHHHHHHHTTCCSSSEEEEEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSS
T ss_pred cccc-----------ccCCc--CchhHHHHHHHHHHHHhccccCceEEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEE
Confidence 4211 11111 22345555666664544432 123345555554332 23466666665521
Q ss_pred -------cCCCeEEEechhhhhhhhccCCCCCcceEEEEEcCCCceEEEEeecceecccCceEeccchHHHHHHHHHHHH
Q 014312 146 -------FNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATYVVPVAEGYVIGSSIKSIPIAGKDVTLFIQQLMR 218 (427)
Q Consensus 146 -------~~~~~v~~~~~~~lal~~~g~~~~~~~tglVVDiG~~~t~v~pV~dG~~l~~~~~~~~~gG~~l~~~l~~~l~ 218 (427)
+.+..+.+.++++.+++..... ....+.+|||+|+++|+++.+.+|.+.......+++||..+++.+.+.++
T Consensus 140 ~~g~~~~i~I~~v~v~pe~~ga~~~~~~~-~~~~~v~vvDiGggTtd~~v~~~g~~~~~~~~~~~~G~~~~~~~i~~~l~ 218 (329)
T 4apw_A 140 VDDKEYSFEITDITIKAEGSGVLFLEQEN-FKNKNVAVIDFGGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRVGDALT 218 (329)
T ss_dssp TTCCCEEEEEEEEEEEEHHHHHHHHSCCC-CTTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHTSSS
T ss_pred ECCEEEEEEEeEEEEEeccHHHHhhcchh-hccCCEEEEEeCCCcEEEEEEECCEEeeccccchhhHHHHHHHHHHHHHH
Confidence 3346788999999998875211 11457799999999999999999999877777889999999999988777
Q ss_pred h
Q 014312 219 E 219 (427)
Q Consensus 219 ~ 219 (427)
.
T Consensus 219 ~ 219 (329)
T 4apw_A 219 D 219 (329)
T ss_dssp S
T ss_pred h
Confidence 5
No 23
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=98.98 E-value=2.3e-09 Score=102.50 Aligned_cols=92 Identities=13% Similarity=0.070 Sum_probs=67.8
Q ss_pred hccCCCeEEEechhhhhhhhccCCCCCcceEEEEEcCCCceEEEEeeccee-cccCceEeccchHHHHHHHHHHHHhcCC
Q 014312 144 ETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATYVVPVAEGYV-IGSSIKSIPIAGKDVTLFIQQLMRERGE 222 (427)
Q Consensus 144 e~~~~~~v~~~~~~~lal~~~g~~~~~~~tglVVDiG~~~t~v~pV~dG~~-l~~~~~~~~~gG~~l~~~l~~~l~~~~~ 222 (427)
+.+++..+.+.+++++|+++.+.......+.+|||+|+++|+++.+.+|.+ +..+....++||.++++.+.+.+.+++.
T Consensus 136 ~~~~i~~v~~~~e~~aa~~~~~~~~~~~~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~~~ 215 (320)
T 2zgy_A 136 DTFTIKDVKVMPESIPAGYEVLQELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSLART 215 (320)
T ss_dssp CCCEEEEEEEEESSHHHHHHHHHHSCTTCEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHTTCCSB
T ss_pred cEEEEEEEEEecCcHHHHHhhhccccCCCCEEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHHHHHcCC
Confidence 455677889999999998876421112457899999999999999999876 4434566799999999999998876532
Q ss_pred CCCCcchHHHHHHh-hhh
Q 014312 223 NVPPEDSFEVARKV-KEM 239 (427)
Q Consensus 223 ~~~~~~~~~~~~~i-Ke~ 239 (427)
. .+...++++ |..
T Consensus 216 ~----i~~~~ae~~lk~~ 229 (320)
T 2zgy_A 216 K----GSSYLADDIIIHR 229 (320)
T ss_dssp G----GGHHHHHHHHHTT
T ss_pred C----CCHHHHHHHHHHh
Confidence 2 344566766 554
No 24
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=98.93 E-value=3e-09 Score=102.93 Aligned_cols=205 Identities=13% Similarity=0.088 Sum_probs=120.9
Q ss_pred cEEEeCCCccEEEEEcCCCCCceeeeeeEEeeccccccccccchhhhhhhhccCCCCCCC-eEEccccccccCCCCCcEE
Q 014312 8 AVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADLD-FFIGDEAVTKSRSSSTYNL 86 (427)
Q Consensus 8 ~vVlD~Gs~~~k~G~ag~~~P~~~~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vg~~~~~~~~~~~~~~~ 86 (427)
.|=+|+|-+++|+ ..++ . .+.+||.++........-....+.........-...... |++|+.|...... ..
T Consensus 6 iigiD~G~~~~K~-~~~~-~-~~~fPS~v~~~~~~~~~l~~~~~~~~~~~~v~v~~~~~~~y~vG~~A~~~~~~---~~- 78 (355)
T 3js6_A 6 VMALDFGNGFVKG-KIND-E-KFVIPSRIGRKTNENNQLKGFVDNKLDVSEFIINGNNDEVLLFGNDLDKTTNT---GK- 78 (355)
T ss_dssp EEEEEECSSEEEE-EETT-E-EEEEESEEEECCSSCCSSTTTSCCCCSCEEEEETTCTTCCEEESTTHHHHCSC---CE-
T ss_pred EEEEEcCCCcEEE-ecCC-e-EEEeceeeeecccCcccccccccCCCCceEEEEecCCeEEEEEchhhhhcCcc---cc-
Confidence 5789999999995 4444 2 478999998753211000000000000000001123556 9999987653221 11
Q ss_pred eCcccCCccCCHHHHHHHHHHHHhh---ccCCCCCCceeEEEeCCCCCHHHH-HHHHHHhhhc-----------cCCCeE
Q 014312 87 SYPIRHGQVDNWDAMERYWQQCIFN---YLRCDPEDHYFLLTESPLTAPESR-EYTGEIMFET-----------FNVPGL 151 (427)
Q Consensus 87 ~~Pi~~G~i~d~~~~e~i~~~~l~~---~L~~~~~~~~vll~e~~~~~~~~r-~~l~e~lfe~-----------~~~~~v 151 (427)
.....+....+ +....++..++.. .+.-+..+..+++..|.-.....| +++.+.+... +.+..|
T Consensus 79 ~~~~~~~k~~~-~~~~iL~l~Ala~~~~~~~~~~~~~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V 157 (355)
T 3js6_A 79 DTASTNDRYDI-KSFKDLVECSIGLLAREVPEEVVNVVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGV 157 (355)
T ss_dssp ECCCSTTGGGS-HHHHHHHHHHHHHHHTTSCSSEEEEEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEE
T ss_pred cccccCCcccC-HHHHHHHHHHHHHHHHhccCCCceEEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEE
Confidence 11112334433 2333333333322 121111133566777765544444 5677776532 234689
Q ss_pred EEechhhhhhhhccCCC-C-----CcceEEEEEcCCCceEEEEeecceecccCceEeccchHHHHHHHHHHHHhc
Q 014312 152 YIAVNSVLALAAGYTTS-K-----CEMTGVVVDVGDGATYVVPVAEGYVIGSSIKSIPIAGKDVTLFIQQLMRER 220 (427)
Q Consensus 152 ~~~~~~~lal~~~g~~~-~-----~~~tglVVDiG~~~t~v~pV~dG~~l~~~~~~~~~gG~~l~~~l~~~l~~~ 220 (427)
.+.++++.|+++.+... + .....+|||+|+++|.++.+.+|.+.......+++||..+++.+.+.++++
T Consensus 158 ~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGggTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i~~~l~~~ 232 (355)
T 3js6_A 158 KIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNMKRVEEESFVINKGTIDFYKRIASHVSKK 232 (355)
T ss_dssp EEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHTC--
T ss_pred EEEeCcHHHHHHHHHccCccccccccCcEEEEEeCCCcEEEEEEcCCEEccccccCcchHHHHHHHHHHHHHHHh
Confidence 99999999999875321 0 145678999999999999999999988878889999999999999998875
No 25
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=98.01 E-value=1.3e-05 Score=79.54 Aligned_cols=79 Identities=25% Similarity=0.359 Sum_probs=61.6
Q ss_pred chhhhhhhhccCCCCCcceEEEEEcCCCceEEEEeecceecccCceEeccchHHHHHHHHHHHHhcCCCCCCcchHHHHH
Q 014312 155 VNSVLALAAGYTTSKCEMTGVVVDVGDGATYVVPVAEGYVIGSSIKSIPIAGKDVTLFIQQLMRERGENVPPEDSFEVAR 234 (427)
Q Consensus 155 ~~~~lal~~~g~~~~~~~tglVVDiG~~~t~v~pV~dG~~l~~~~~~~~~gG~~l~~~l~~~l~~~~~~~~~~~~~~~~~ 234 (427)
-++.+|.+++-+..+...-.++||+|.++|++.-+.+|..+.. ..+++||+++|..+..-|.- .+...+|
T Consensus 392 ~ep~AA~laaLTedE~elGvaiIDmGgGTTd~sVf~~g~lv~a--~~ip~gG~~VT~DIA~~Lg~--------~d~~~AE 461 (607)
T 1nbw_A 392 VEANMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQITA--VHLAGAGNMVSLLIKTELGL--------EDLSLAE 461 (607)
T ss_dssp CHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECSSSCEEE--EEEECCHHHHHHHHHHHHTC--------SCHHHHH
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEEE--EEeccchHHHHHHHHHHhCC--------CCHHHHH
Confidence 5667776666544333556789999999999999999987744 55899999999999988861 2478999
Q ss_pred HhhhhcCccc
Q 014312 235 KVKEMYCYTC 244 (427)
Q Consensus 235 ~iKe~~c~v~ 244 (427)
+||. |..+.
T Consensus 462 rIK~-YG~A~ 470 (607)
T 1nbw_A 462 AIKK-YPLAK 470 (607)
T ss_dssp HHHH-SCEEE
T ss_pred Hhcc-cCcee
Confidence 9999 76543
No 26
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=98.01 E-value=4e-05 Score=75.93 Aligned_cols=79 Identities=20% Similarity=0.203 Sum_probs=62.0
Q ss_pred chhhhhhhhccCCCCCcceEEEEEcCCCceEEEEeecceecccCceEeccchHHHHHHHHHHHHhcCCCCCCcchHHHHH
Q 014312 155 VNSVLALAAGYTTSKCEMTGVVVDVGDGATYVVPVAEGYVIGSSIKSIPIAGKDVTLFIQQLMRERGENVPPEDSFEVAR 234 (427)
Q Consensus 155 ~~~~lal~~~g~~~~~~~tglVVDiG~~~t~v~pV~dG~~l~~~~~~~~~gG~~l~~~l~~~l~~~~~~~~~~~~~~~~~ 234 (427)
-++.+|.+++-+..+...-.++||+|.++|++.-+.+|..+.. ..+++||+++|..+..-|.- .+...+|
T Consensus 390 ~ep~AAglaaLTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv~a--~~ip~gG~~VT~DIA~~Lgt--------~d~~~AE 459 (610)
T 2d0o_A 390 AEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDIIA--THLAGAGDMVTMIIARELGL--------EDRYLAE 459 (610)
T ss_dssp EHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECTTCCEEE--EEEECSHHHHHHHHHHHHTC--------CCHHHHH
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEEE--EEeccchHHHHHHHHHHhCC--------CCHHHHH
Confidence 5677777766544433556789999999999999999987744 55899999999999988861 2478999
Q ss_pred HhhhhcCccc
Q 014312 235 KVKEMYCYTC 244 (427)
Q Consensus 235 ~iKe~~c~v~ 244 (427)
+||. |..+.
T Consensus 460 rIK~-YG~A~ 468 (610)
T 2d0o_A 460 EIKK-YPLAK 468 (610)
T ss_dssp HHHH-SCEEE
T ss_pred Hhcc-cCcee
Confidence 9999 76543
No 27
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=95.33 E-value=0.051 Score=51.08 Aligned_cols=80 Identities=23% Similarity=0.063 Sum_probs=52.9
Q ss_pred CHHHHHHHHHHhhhccCCCeEEEechh---hhhhhhccCCCCCcceEEEEEcCCCceEEEEeecceecccCceEeccchH
Q 014312 131 APESREYTGEIMFETFNVPGLYIAVNS---VLALAAGYTTSKCEMTGVVVDVGDGATYVVPVAEGYVIGSSIKSIPIAGK 207 (427)
Q Consensus 131 ~~~~r~~l~e~lfe~~~~~~v~~~~~~---~lal~~~g~~~~~~~tglVVDiG~~~t~v~pV~dG~~l~~~~~~~~~gG~ 207 (427)
...+++..++.+-+..|++ +-++... .++..+.-.......+++|||+|.++|.++-+-+|.+. ....+++|+-
T Consensus 95 ~A~N~~~fl~~v~~~~G~~-i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~~~~~~--~~~Sl~~G~v 171 (315)
T 1t6c_A 95 RAKNAEEFLERVKREVGLV-VEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGKGYKVR--EVISLPIGIV 171 (315)
T ss_dssp TSTTHHHHHHHHHHHTCCC-EEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEETTEEE--EEEEECCCHH
T ss_pred cCcCHHHHHHHHHHHHCCC-EEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEeCCcee--eEEEEeccHH
Confidence 3446677777777778886 4444333 22221110000014579999999999999998888775 3566899999
Q ss_pred HHHHHH
Q 014312 208 DVTLFI 213 (427)
Q Consensus 208 ~l~~~l 213 (427)
.+++.+
T Consensus 172 ~l~e~~ 177 (315)
T 1t6c_A 172 NLTETF 177 (315)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 888765
No 28
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=95.32 E-value=0.043 Score=52.26 Aligned_cols=80 Identities=19% Similarity=0.117 Sum_probs=50.6
Q ss_pred HHHHHHHHHhhhccCCCeEEEech---hhhhhhhccCCCC---CcceEEEEEcCCCceEEEEeec--ceec--ccCceEe
Q 014312 133 ESREYTGEIMFETFNVPGLYIAVN---SVLALAAGYTTSK---CEMTGVVVDVGDGATYVVPVAE--GYVI--GSSIKSI 202 (427)
Q Consensus 133 ~~r~~l~e~lfe~~~~~~v~~~~~---~~lal~~~g~~~~---~~~tglVVDiG~~~t~v~pV~d--G~~l--~~~~~~~ 202 (427)
.+++..++-+-+..|++ +-++.. +-++..+.-.... ....++|||+|.++|.++-+.+ +.+. ......+
T Consensus 102 ~N~~~fl~~v~~~tGi~-ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~Sl 180 (343)
T 3cer_A 102 ENREEFEDEIERILGVR-PEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSM 180 (343)
T ss_dssp TTHHHHHHHHHHHHSSC-CEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCSEEEEE
T ss_pred cCHHHHHHHHHHHHCCC-EEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCcccccceeEEE
Confidence 45666777777777886 444433 3333333210000 1256999999999999998876 4331 1245678
Q ss_pred ccchHHHHHHH
Q 014312 203 PIAGKDVTLFI 213 (427)
Q Consensus 203 ~~gG~~l~~~l 213 (427)
|+|+..+++.+
T Consensus 181 plG~v~lt~~~ 191 (343)
T 3cer_A 181 NIGSVRMTERH 191 (343)
T ss_dssp SCCHHHHHHHT
T ss_pred ehhHHHHHHHh
Confidence 99999998865
No 29
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=95.22 E-value=0.075 Score=49.92 Aligned_cols=78 Identities=10% Similarity=0.135 Sum_probs=50.8
Q ss_pred HHHHHHHHHhhhccCCCeEEEech---hhhhhhhccCCCC-CcceEEEEEcCCCceEEEEeecceecccCceEeccchHH
Q 014312 133 ESREYTGEIMFETFNVPGLYIAVN---SVLALAAGYTTSK-CEMTGVVVDVGDGATYVVPVAEGYVIGSSIKSIPIAGKD 208 (427)
Q Consensus 133 ~~r~~l~e~lfe~~~~~~v~~~~~---~~lal~~~g~~~~-~~~tglVVDiG~~~t~v~pV~dG~~l~~~~~~~~~gG~~ 208 (427)
.+++..++-+-+..|++ +-++.. +-++..+.-.... ....++|||+|.++|.++-+.+|.+.. ...+|+|.-.
T Consensus 89 ~N~~~fl~~i~~~tG~~-i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~--~~Sl~lG~vr 165 (315)
T 3mdq_A 89 SNKQVLIDRIKKEVNID-VEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNKNEILW--KQSFEIGGQR 165 (315)
T ss_dssp TTHHHHHHHHHHHHCCC-EEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECSSCEEE--EEEESCCHHH
T ss_pred cCHHHHHHHHHHHHCCC-eEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEECCeEee--eEEEechhhH
Confidence 45566777777778886 444433 3222222110000 135799999999999999998887663 5678999987
Q ss_pred HHHHH
Q 014312 209 VTLFI 213 (427)
Q Consensus 209 l~~~l 213 (427)
+++.+
T Consensus 166 l~e~f 170 (315)
T 3mdq_A 166 LIDRF 170 (315)
T ss_dssp HHHHS
T ss_pred HHHHh
Confidence 77654
No 30
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=94.25 E-value=0.24 Score=49.78 Aligned_cols=78 Identities=15% Similarity=0.053 Sum_probs=51.7
Q ss_pred HHHHHHHHHhhhccCCCeEEEechh---hhhhhhccCCCCCcceEEEEEcCCCceEEEEeecceecccCceEeccchHHH
Q 014312 133 ESREYTGEIMFETFNVPGLYIAVNS---VLALAAGYTTSKCEMTGVVVDVGDGATYVVPVAEGYVIGSSIKSIPIAGKDV 209 (427)
Q Consensus 133 ~~r~~l~e~lfe~~~~~~v~~~~~~---~lal~~~g~~~~~~~tglVVDiG~~~t~v~pV~dG~~l~~~~~~~~~gG~~l 209 (427)
.+++..++-+-+..|++ +-++... -++..+.-........++|||+|.++|.++-+-+|.+. ....+++|.-.+
T Consensus 96 ~N~~~fl~~i~~~tG~~-i~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~~~~~~--~~~Sl~lG~vrl 172 (513)
T 1u6z_A 96 LNATDFLKRAEKVIPYP-IEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPI--LVESRRMGCVSF 172 (513)
T ss_dssp TTHHHHHHHHTTTCSSC-EEECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEETTEEE--EEEEESCCHHHH
T ss_pred cCHHHHHHHHHHHHCCC-EEEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEeCCeee--EEEEEeccHHHH
Confidence 45667777778888886 5555433 23322221000012269999999999999988888765 355689999888
Q ss_pred HHHH
Q 014312 210 TLFI 213 (427)
Q Consensus 210 ~~~l 213 (427)
++.+
T Consensus 173 te~f 176 (513)
T 1u6z_A 173 AQLY 176 (513)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7755
No 31
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=92.72 E-value=0.64 Score=46.59 Aligned_cols=77 Identities=9% Similarity=0.087 Sum_probs=51.3
Q ss_pred HHHHHHHHHHhhhccCCCeEEEech---hhhhhhhccCCCCCcceEEEEEcCCCceEEEEeecceecccCceEeccchHH
Q 014312 132 PESREYTGEIMFETFNVPGLYIAVN---SVLALAAGYTTSKCEMTGVVVDVGDGATYVVPVAEGYVIGSSIKSIPIAGKD 208 (427)
Q Consensus 132 ~~~r~~l~e~lfe~~~~~~v~~~~~---~~lal~~~g~~~~~~~tglVVDiG~~~t~v~pV~dG~~l~~~~~~~~~gG~~ 208 (427)
-.+++..++-+-+..|++ +-++.. +-++..+.-... ....++|||+|.++|.++-+-+|.+. ....+++|.-.
T Consensus 99 A~N~~~fl~~i~~~tG~~-ievIsG~EEA~l~~~gv~~~~-~~~~~lvvDIGGGStEl~~~~~~~~~--~~~Sl~lG~vr 174 (508)
T 3hi0_A 99 AENGPDFIREAEAILGCE-IEVLSGEKEALYSAYGVISGF-YQPDGIAGDLGGGSLELIDIKDKSCG--EGITLPLGGLR 174 (508)
T ss_dssp STTHHHHHHHHHHHHTSC-EEECCHHHHHHHHHHHHHHHS-SSCEEEEEEECSSCEEEEEEETTEEC--CCEEESCCHHH
T ss_pred CcCHHHHHHHHHHHHCCC-eEEecHHHHHHHHHHHHHhcC-CCCCeEEEEeCCCceEEEEeeCCeee--eEEEecceEEe
Confidence 345666777777788887 555433 233322221000 13468999999999999999998876 45678999988
Q ss_pred HHHH
Q 014312 209 VTLF 212 (427)
Q Consensus 209 l~~~ 212 (427)
+++.
T Consensus 175 l~e~ 178 (508)
T 3hi0_A 175 LSEQ 178 (508)
T ss_dssp HHHH
T ss_pred hhhc
Confidence 8764
No 32
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=91.08 E-value=0.049 Score=49.96 Aligned_cols=51 Identities=20% Similarity=0.380 Sum_probs=38.2
Q ss_pred HHHhhcCeEEecCccCcccHHHHHHHHHHHHHHHhhhhhhcccCCccCCCCeeEEEecCCCccceeeecceeecc
Q 014312 321 RRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASDARLGGEVKAQPVEVNVVSHAIQRYAVWFGGSVLAS 395 (427)
Q Consensus 321 r~~l~~nIil~GG~s~i~G~~eRL~~eL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~W~Ggsilas 395 (427)
+....+.|+|+||.+..|++.++|++.+.. +++.++++.+..=+||+++|.
T Consensus 203 ~~~~~~~vvl~GGva~n~~lr~~l~~~~g~------------------------~~~~p~~p~~~~A~GAAl~A~ 253 (276)
T 4ehu_A 203 RIGVQRNVVMVGGVARNSGIVRAMAREINT------------------------EIIVPDIPQLTGALGAALYAF 253 (276)
T ss_dssp HHCCCSSEEEESGGGGCHHHHHHHHHHHTS------------------------CEECCSSGGGHHHHHHHHHHH
T ss_pred hcccCCeEEEecCccchHHHHHHHHHHHCC------------------------CeeeCCCcchHHHHHHHHHHH
Confidence 444457899999999999999999766521 234456777777789999883
No 33
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=89.39 E-value=4.7 Score=37.55 Aligned_cols=58 Identities=10% Similarity=-0.077 Sum_probs=39.3
Q ss_pred HHHHhhhccCCCeEEEechhhhhhhhccCC--CCCcceEEEEEcCCCceEEEEeecceeccc
Q 014312 138 TGEIMFETFNVPGLYIAVNSVLALAAGYTT--SKCEMTGVVVDVGDGATYVVPVAEGYVIGS 197 (427)
Q Consensus 138 l~e~lfe~~~~~~v~~~~~~~lal~~~g~~--~~~~~tglVVDiG~~~t~v~pV~dG~~l~~ 197 (427)
+.+.|-+.|++| |++.+..-+++++-... .++..+.++|-+|.+ .-..-|.+|.++..
T Consensus 112 l~~~l~~~~~~p-V~v~NDa~aaalgE~~~g~~~~~~~~~~l~~GtG-iG~gii~~G~l~~G 171 (327)
T 4db3_A 112 LRADLEAKIGRS-VKIENDANCFALSEAWDEELQDAPSVMGLILGTG-FGGGLIYEGKVFSG 171 (327)
T ss_dssp HHHHHHHHHSSC-CEEEEHHHHHHHHHHTSTTTTTCSEEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHHHHHHCCC-EEEecchhHHHHHHHHhCCCCCCCcEEEEEeCcc-ceEEEEECCEEeec
Confidence 344455677898 88888888776653211 113578899999987 55666789987753
No 34
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=88.02 E-value=0.4 Score=44.85 Aligned_cols=25 Identities=32% Similarity=0.660 Sum_probs=23.5
Q ss_pred ceEEEEEcCCCceEEEEeecceecc
Q 014312 172 MTGVVVDVGDGATYVVPVAEGYVIG 196 (427)
Q Consensus 172 ~tglVVDiG~~~t~v~pV~dG~~l~ 196 (427)
.++++||||..+|+++||.+|.++.
T Consensus 127 ~~~llvDIGsTTTDIipi~~G~pl~ 151 (334)
T 3cet_A 127 ENCILVDMGSTTTDIIPIVEGKVVA 151 (334)
T ss_dssp SSEEEEEECSSCEEEEEEETTEECC
T ss_pred CCEEEEEcCcchhhhhhhcCCeecc
Confidence 5799999999999999999999976
No 35
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=87.12 E-value=3.5 Score=38.30 Aligned_cols=57 Identities=19% Similarity=0.201 Sum_probs=38.3
Q ss_pred HHHhhhcc-CCCeEEEechhhhhhhhccC--CCCCcceEEEEEcCCCceEEEEeecceeccc
Q 014312 139 GEIMFETF-NVPGLYIAVNSVLALAAGYT--TSKCEMTGVVVDVGDGATYVVPVAEGYVIGS 197 (427)
Q Consensus 139 ~e~lfe~~-~~~~v~~~~~~~lal~~~g~--~~~~~~tglVVDiG~~~t~v~pV~dG~~l~~ 197 (427)
.+.+-+.| ++| |++.+..-+++++-.. ..++..+.++|-+|.+ .-..-|.+|.++..
T Consensus 110 ~~~l~~~~~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~gii~~G~l~~G 169 (321)
T 3r8e_A 110 VEILRSEFPHIH-FKIENDAKCAALGEYYFGENKRMQTFILLALGTG-VGSGVMMNGKLFIG 169 (321)
T ss_dssp HHHHHHHCTTSE-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHHHHcCCCC-EEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEecC
Confidence 34444667 887 7888888777554210 0012678999999987 56667789988763
No 36
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=86.80 E-value=2.4 Score=40.20 Aligned_cols=106 Identities=10% Similarity=0.012 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHhhccCCCCCCceeEEEeCC---CCCHHHHHHHHHHhhhcc-------CCCeEEEech---hhhh----
Q 014312 98 WDAMERYWQQCIFNYLRCDPEDHYFLLTESP---LTAPESREYTGEIMFETF-------NVPGLYIAVN---SVLA---- 160 (427)
Q Consensus 98 ~~~~e~i~~~~l~~~L~~~~~~~~vll~e~~---~~~~~~r~~l~e~lfe~~-------~~~~v~~~~~---~~la---- 160 (427)
-+.+++.++. |.+ . ..-...++.+.-.. ..+.+.++.+++.+-+.+ +. .+.++.. +.++
T Consensus 52 ~~~~~~~l~~-f~~-~-~~~~~~~v~~~ATaa~R~a~n~~~~~~l~~v~~~~~~~~~~~g~-~v~VIsG~eEa~~~~~gv 127 (353)
T 3aap_A 52 SVTIDAYLTM-LLA-D-APIHNIPVYFYATAGMRLLPQSQQKKYYDELEYWFRQQSQWQLV-EAKTITGNDEALFDWLAV 127 (353)
T ss_dssp HHHHHHHHHH-HHT-T-CSCCSEEEEEEECHHHHTSCHHHHHHHHHHHHHHHHTCSSEEEE-EEEECCHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHH-H-HhcCCCcEEEEecHHHhcCcHHHHHHHHHHHHHHHhhCCCCCCC-eEEECChHHHHHHHHHHH
Confidence 4566666663 323 1 11223344443321 123444666766666655 33 3444433 2222
Q ss_pred hhhccCCC-CCcceEEEEEcCCCceEEEEeec--ceecccCceEeccchH
Q 014312 161 LAAGYTTS-KCEMTGVVVDVGDGATYVVPVAE--GYVIGSSIKSIPIAGK 207 (427)
Q Consensus 161 l~~~g~~~-~~~~tglVVDiG~~~t~v~pV~d--G~~l~~~~~~~~~gG~ 207 (427)
.|..+.-. ....+.+|||+|.++|.++-..+ +.+.......+++||.
T Consensus 128 ~~~l~~~~~~~~~t~~v~DiGGGStei~~~~~~~~~~~~~~~~sl~lG~~ 177 (353)
T 3aap_A 128 NYKLDTLKSVQNKSVGVMDMGGASVQIVFPMPKNAEISKHNQVELNIYGQ 177 (353)
T ss_dssp HHHTTCSSSCCSSCEEEEEECSSEEEEEEECCCCTTSCGGGEEEEEETTE
T ss_pred HHHhhhccccccccEEEEEeCCCceEEEEecCCccccCCCceEEEEECCc
Confidence 22222100 01347999999999999987644 3444333566788874
No 37
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=86.78 E-value=4.4 Score=36.90 Aligned_cols=58 Identities=10% Similarity=0.078 Sum_probs=41.2
Q ss_pred HHHHHhhhccCCCeEEEechhhhhhhhccCCCCCcceEEEEEcCCCceEEEEeecceeccc
Q 014312 137 YTGEIMFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATYVVPVAEGYVIGS 197 (427)
Q Consensus 137 ~l~e~lfe~~~~~~v~~~~~~~lal~~~g~~~~~~~tglVVDiG~~~t~v~pV~dG~~l~~ 197 (427)
.+.+.+ +.|++| +++.+..-+++++-....++..+.++|-+|.+ .-..-|.+|.++..
T Consensus 86 ~l~~~l-~~~~~p-v~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtG-iG~giv~~G~l~~G 143 (292)
T 2gup_A 86 SWYEAL-SSYQLP-VHLENDANCVGLSELLAHPELENAACVVIGTG-IGGAMIINGRLHRG 143 (292)
T ss_dssp BHHHHT-GGGCCC-EEEEEHHHHHHHHHHHHCTTCSSEEEEEESSS-EEEEEEETTEEECC
T ss_pred CHHHHH-HHcCCC-EEEechHHHHHHHHHHhcCCCCeEEEEEECCc-eEEEEEECCEEEec
Confidence 466777 889998 88888888887763100012568999999987 45667789987753
No 38
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=80.30 E-value=9.9 Score=34.37 Aligned_cols=18 Identities=22% Similarity=0.303 Sum_probs=15.3
Q ss_pred EEEeCCCccEEEEEcCCC
Q 014312 9 VVIDNGTGYTKMGFAGNV 26 (427)
Q Consensus 9 vVlD~Gs~~~k~G~ag~~ 26 (427)
++||+|-.++|.|+-.++
T Consensus 3 L~IDIGNT~ik~gl~~~~ 20 (268)
T 2h3g_X 3 FVLDVGNTNAVLGVFEEG 20 (268)
T ss_dssp EEEEECSSEEEEEEEETT
T ss_pred EEEEECcCcEEEEEEECC
Confidence 789999999999987543
No 39
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=79.61 E-value=0.64 Score=42.80 Aligned_cols=48 Identities=13% Similarity=-0.011 Sum_probs=37.6
Q ss_pred cCeEEecC-ccCcccHHHHHHHHHHHHHHHhhhhhhcccCCccCCCCeeEEEecCCCccceeeecceeec
Q 014312 326 KNIVLSGG-STMFKDFHRRLQRDLKKIVDARVLASDARLGGEVKAQPVEVNVVSHAIQRYAVWFGGSVLA 394 (427)
Q Consensus 326 ~nIil~GG-~s~i~G~~eRL~~eL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~W~Ggsila 394 (427)
++|+++|| .+..|++.++|.+.+... ..+++.+++++|..=+||++++
T Consensus 238 ~~Vvf~Gg~l~~n~~l~~~l~~~~~~~---------------------~~~~~~p~~~~~~gAlGAaL~~ 286 (287)
T 2ews_A 238 ENIVYIGSSFHNNALLRKVVEDYTVLR---------------------GCKPYYVENGAFSGAIGALYLE 286 (287)
T ss_dssp CEEEEESGGGTTCHHHHHHHHHHHHHT---------------------TCEEEECTTGGGHHHHHHHHTC
T ss_pred CeEEEeCCchhcCHHHHHHHHHHHhhC---------------------CceEEECCCccHHHHHHHHHhC
Confidence 47999999 999999999998765432 2345557778898889998775
No 40
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=79.29 E-value=22 Score=31.69 Aligned_cols=19 Identities=11% Similarity=0.218 Sum_probs=16.1
Q ss_pred cEEEeCCCccEEEEEcCCC
Q 014312 8 AVVIDNGTGYTKMGFAGNV 26 (427)
Q Consensus 8 ~vVlD~Gs~~~k~G~ag~~ 26 (427)
-++||+|-.++|.|+-.+.
T Consensus 5 ~L~IDIGNT~ik~gl~~~~ 23 (249)
T 3bex_A 5 YLLVDVGNTHSVFSITEDG 23 (249)
T ss_dssp EEEEEECSSEEEEEEESSS
T ss_pred EEEEEECCCeEEEEEEECC
Confidence 5899999999999987543
No 41
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=78.76 E-value=19 Score=33.12 Aligned_cols=58 Identities=9% Similarity=0.080 Sum_probs=38.8
Q ss_pred HHHHhhhccCCCeEEEechhhhhhhhccC--CCCCcceEEEEEcCCCceEEEEeecceeccc
Q 014312 138 TGEIMFETFNVPGLYIAVNSVLALAAGYT--TSKCEMTGVVVDVGDGATYVVPVAEGYVIGS 197 (427)
Q Consensus 138 l~e~lfe~~~~~~v~~~~~~~lal~~~g~--~~~~~~tglVVDiG~~~t~v~pV~dG~~l~~ 197 (427)
+.+.+-+.|++| |++.+..-+++++--. ..++..+.++|-+|.+ .-..-|.+|.++.-
T Consensus 88 l~~~l~~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~~G~l~~G 147 (321)
T 3vgl_A 88 LKDKVEQRVGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGIIIGNKLRRG 147 (321)
T ss_dssp HHHHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHHhhhhCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEEECCEEecC
Confidence 334444667888 8888888777665210 0012578999999987 56677789988753
No 42
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=78.34 E-value=18 Score=32.53 Aligned_cols=19 Identities=21% Similarity=0.153 Sum_probs=16.3
Q ss_pred cEEEeCCCccEEEEEcCCC
Q 014312 8 AVVIDNGTGYTKMGFAGNV 26 (427)
Q Consensus 8 ~vVlD~Gs~~~k~G~ag~~ 26 (427)
-++||+|..++|+|+-.++
T Consensus 4 lL~IDIGNT~iK~gl~d~~ 22 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGD 22 (266)
T ss_dssp EEEEEECSSEEEEEEEETT
T ss_pred EEEEEECCCeEEEEEEECC
Confidence 6899999999999987543
No 43
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=65.80 E-value=22 Score=32.65 Aligned_cols=56 Identities=14% Similarity=0.175 Sum_probs=38.2
Q ss_pred HHHHhhhccCCCeEEEechhhhhhhhc---cCCCCCcceEEEEEcCCCceEEEEeecceecc
Q 014312 138 TGEIMFETFNVPGLYIAVNSVLALAAG---YTTSKCEMTGVVVDVGDGATYVVPVAEGYVIG 196 (427)
Q Consensus 138 l~e~lfe~~~~~~v~~~~~~~lal~~~---g~~~~~~~tglVVDiG~~~t~v~pV~dG~~l~ 196 (427)
+.+.+=+.|++| +++.+..-+++++- |. .++..+.++|-+|.+ +-..-|.+|.++.
T Consensus 100 l~~~l~~~~~~p-v~v~ND~~aaa~~e~~~g~-~~~~~~~~~l~~GtG-iG~giv~~G~l~~ 158 (326)
T 2qm1_A 100 VKEQIESALGIP-FALDNDANVAALGERWKGA-GENNPDVIFITLGTG-VGGGIVAAGKLLH 158 (326)
T ss_dssp HHHHHHHHHCSC-EEEEEHHHHHHHHHHHHST-TTTCSCEEEEEESSS-EEEEEEETTEECC
T ss_pred HHHHHHHHhCCC-EEEecHHHHHHHHHHHhCC-CCCCCcEEEEEECCc-eEEEEEECCEEee
Confidence 334444567888 78888888876652 11 012568999999998 5577778998775
No 44
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=57.52 E-value=1.8 Score=39.42 Aligned_cols=46 Identities=22% Similarity=0.387 Sum_probs=35.0
Q ss_pred cCeEEecCccCcccHHHHHHHHHHHHHHHhhhhhhcccCCccCCCCeeEEEecCCCccceeeecceeecc
Q 014312 326 KNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASDARLGGEVKAQPVEVNVVSHAIQRYAVWFGGSVLAS 395 (427)
Q Consensus 326 ~nIil~GG~s~i~G~~eRL~~eL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~W~Ggsilas 395 (427)
+.|+++||.+..+++.+.+.+.|.. + |..++.+.+..=+|++++|.
T Consensus 210 ~~i~~~GG~a~n~~~~~~~~~~lg~----------------------~--v~~p~~~~~~~AlGAAl~A~ 255 (270)
T 1hux_A 210 KDVVMTGGVAQNYGVRGALEEGLGV----------------------E--IKTSPLAQYNGALGAALYAY 255 (270)
T ss_dssp SSEEEESGGGGCHHHHHHHHHHHCS----------------------C--EECCGGGGGHHHHHHHHHHH
T ss_pred CeEEEeCccccCHHHHHHHHHHHCC----------------------C--eEeCCCcchHhHHHHHHHHH
Confidence 6799999999999999999777631 1 23344566777889999884
No 45
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=49.83 E-value=5.2 Score=37.91 Aligned_cols=73 Identities=11% Similarity=-0.009 Sum_probs=44.3
Q ss_pred ChHHHHHHHHHhCCh-hhHHHhhcCeEEecC-ccCcccHHHHHHHHHHHHHHHhhhhhhcccCCccCCCCeeEEEecCCC
Q 014312 304 PLPAVIDKCIQSAPI-DTRRALYKNIVLSGG-STMFKDFHRRLQRDLKKIVDARVLASDARLGGEVKAQPVEVNVVSHAI 381 (427)
Q Consensus 304 ~l~~~i~~~i~~~~~-d~r~~l~~nIil~GG-~s~i~G~~eRL~~eL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~ 381 (427)
+|..+|.+-|..... --++.=.++|+++|| .+..|++.+.|.+.|.-.- .. .+++.-+.+
T Consensus 284 gll~sVa~~I~~lA~l~A~~~~i~~IvftGgfla~n~~~~~~L~~~l~~ws----------------~g--~~~~~~~~~ 345 (360)
T 2i7n_A 284 ATLVTITNNIGSIARMCALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWS----------------KG--QLKALFLEH 345 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCEEEESGGGCSSSHHHHHHHHHHHHHT----------------TT--SCCEEEETT
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeEEEeCcccccCHHHHHHHHHHHhhhh----------------cC--CeeEEEcCC
Confidence 344455444433211 113333458999999 9999999999998886321 01 123333456
Q ss_pred ccceeeecceeec
Q 014312 382 QRYAVWFGGSVLA 394 (427)
Q Consensus 382 ~~~~~W~Ggsila 394 (427)
++|+.=+||++++
T Consensus 346 ~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 346 EGYFGAVGALLEL 358 (360)
T ss_dssp TTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHh
Confidence 7888888887653
No 46
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=48.44 E-value=1.5e+02 Score=26.46 Aligned_cols=70 Identities=13% Similarity=0.059 Sum_probs=46.4
Q ss_pred eeEEEeCCCCCHHHHHHHHHHhhhccCC-CeEEEechhhhhhhhccCCCCCcceEEEEEcCCCceEEEEeecceec
Q 014312 121 YFLLTESPLTAPESREYTGEIMFETFNV-PGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATYVVPVAEGYVI 195 (427)
Q Consensus 121 ~vll~e~~~~~~~~r~~l~e~lfe~~~~-~~v~~~~~~~lal~~~g~~~~~~~tglVVDiG~~~t~v~pV~dG~~l 195 (427)
.+-+..|-.. ......+.+.|=+.|++ ..+.+.+..-+++++.. +..++++|=+|.+.--..-+.+|.+.
T Consensus 62 ~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~----g~~~~v~v~~GTGigg~~i~~~G~~~ 132 (291)
T 1zbs_A 62 AVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALC----GDSEGIACILGTGSNSCLFDGREIKA 132 (291)
T ss_dssp EEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHT----TTSCEEEEEESSSEEEEEECSSSEEE
T ss_pred EEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhc----CCCCcEEEEecCChheEEECCCCcEE
Confidence 3556566544 22233566666666775 24889999999888742 15688888899887545555688875
No 47
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=36.14 E-value=2.4e+02 Score=25.23 Aligned_cols=88 Identities=14% Similarity=0.083 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHhhccCCCCCC---ceeEEEeCCCCCHHHHHHHHHHhhhcc--CCCeEEEechhhhhhhhccCCCCCcc
Q 014312 98 WDAMERYWQQCIFNYLRCDPED---HYFLLTESPLTAPESREYTGEIMFETF--NVPGLYIAVNSVLALAAGYTTSKCEM 172 (427)
Q Consensus 98 ~~~~e~i~~~~l~~~L~~~~~~---~~vll~e~~~~~~~~r~~l~e~lfe~~--~~~~v~~~~~~~lal~~~g~~~~~~~ 172 (427)
|+.+...++.++.+ .+.++.+ ..+-+..|-......... +-+.| +.| +++.+..-+++++.. +..
T Consensus 53 ~~~l~~~i~~~l~~-~~~~~~~i~~~~igig~pG~v~~~~~~~----l~~~~~~~~p-v~v~NDa~aaa~ge~----~~~ 122 (305)
T 1zc6_A 53 WQAVLSTLEAAFQQ-AGLPAAPASACAIGLGLSGVHNRQWAGE----FESQAPGFAR-LSLATDGYTTLLGAH----GGQ 122 (305)
T ss_dssp HHHHHHHHHHHHHH-TTCCCCCGGGEEEEEEESCCCTTSHHHH----HHHTCCCCSE-EEEECHHHHHHHHHT----TTS
T ss_pred HHHHHHHHHHHHHh-cCCChhhhccceEEEEecCCCchHHHHH----HHHhCCCCce-EEEECCHHHHHHhhc----CCC
Confidence 45666666665532 3444443 235666665443322222 22234 454 888899988888742 146
Q ss_pred eEEEEEcCCCceEEEEeecceec
Q 014312 173 TGVVVDVGDGATYVVPVAEGYVI 195 (427)
Q Consensus 173 tglVVDiG~~~t~v~pV~dG~~l 195 (427)
++++|-+|.+..-..-+.+|...
T Consensus 123 ~~v~v~~GTGigg~~i~~~G~~~ 145 (305)
T 1zc6_A 123 PGIIVALGTGSIGEALYPDGSHR 145 (305)
T ss_dssp SEEEEEESSSEEEEEECTTSCEE
T ss_pred CeEEEEecCCeEEEEEeCCCcEE
Confidence 88999999886433333488754
No 48
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=33.03 E-value=2.1e+02 Score=25.26 Aligned_cols=24 Identities=25% Similarity=0.410 Sum_probs=20.3
Q ss_pred ceEEEEEcCCCceEEEEeecceec
Q 014312 172 MTGVVVDVGDGATYVVPVAEGYVI 195 (427)
Q Consensus 172 ~tglVVDiG~~~t~v~pV~dG~~l 195 (427)
...+|||+|.+.|.++-+-+|.+.
T Consensus 96 ~~~~vidiGGqd~k~i~~~~g~v~ 119 (270)
T 1hux_A 96 NVHTVIDIGGQDVKVIHVENGTMT 119 (270)
T ss_dssp TCCEEEEEETTEEEEEEEETTEEE
T ss_pred CCCEEEEECCCceEEEEEeCCcee
Confidence 345799999999999999999765
No 49
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=32.30 E-value=2.9e+02 Score=25.06 Aligned_cols=88 Identities=16% Similarity=0.140 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHhhccCCCCC--CceeEEEeCCCCCHHHHHHHHHHhhhccC---CCeEEEechhhhhhhhccCCCCCcc
Q 014312 98 WDAMERYWQQCIFNYLRCDPE--DHYFLLTESPLTAPESREYTGEIMFETFN---VPGLYIAVNSVLALAAGYTTSKCEM 172 (427)
Q Consensus 98 ~~~~e~i~~~~l~~~L~~~~~--~~~vll~e~~~~~~~~r~~l~e~lfe~~~---~~~v~~~~~~~lal~~~g~~~~~~~ 172 (427)
|+.+...++.++.+ .+.++. -..+-+..|-.........+.+.+=+.|+ .| +++.+..-+++++.. ..
T Consensus 49 ~~~i~~~i~~~~~~-~~~~~~~~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~p-v~v~NDa~aaa~a~~-----~~ 121 (347)
T 2ch5_A 49 VERINEMVNRAKRK-AGVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSES-YLITTDAAGSIATAT-----PD 121 (347)
T ss_dssp HHHHHHHHHHHHHH-HTCCTTCCBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSC-EEEEEHHHHHHHHHC-----SS
T ss_pred HHHHHHHHHHHHHh-cCCCcccceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCce-EEEECcHHHHHHhhC-----CC
Confidence 45566666665533 233332 23466777766555545566666666775 65 788888888887742 35
Q ss_pred eEEEEEcCCCceEEEEe-ecce
Q 014312 173 TGVVVDVGDGATYVVPV-AEGY 193 (427)
Q Consensus 173 tglVVDiG~~~t~v~pV-~dG~ 193 (427)
++++|-+|.+.-- ..| .+|.
T Consensus 122 ~~v~v~~GTGig~-~~v~~~G~ 142 (347)
T 2ch5_A 122 GGVVLISGTGSNC-RLINPDGS 142 (347)
T ss_dssp CEEEEEESSSEEE-EEECTTSC
T ss_pred CcEEEEEcCCcee-EEEcCCCC
Confidence 7888888887543 333 3554
No 50
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=30.62 E-value=2e+02 Score=25.73 Aligned_cols=17 Identities=18% Similarity=0.225 Sum_probs=14.9
Q ss_pred cEEEeCCCccEEEEEcC
Q 014312 8 AVVIDNGTGYTKMGFAG 24 (427)
Q Consensus 8 ~vVlD~Gs~~~k~G~ag 24 (427)
-++||+|-.++|.|+-.
T Consensus 25 ~L~IDiGNT~ik~g~~~ 41 (271)
T 2f9w_A 25 ILELDCGNSLIKWRVIE 41 (271)
T ss_dssp EEEEEECSSCEEEEEEE
T ss_pred EEEEEeCCCeeEEEEEe
Confidence 58999999999999854
No 51
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=30.06 E-value=11 Score=34.13 Aligned_cols=56 Identities=14% Similarity=0.030 Sum_probs=38.3
Q ss_pred HHHHhhhccCCCeEEEechhhhhhhhc---cCCCCCcceEEEEEcCCCceEEEEeecceeccc
Q 014312 138 TGEIMFETFNVPGLYIAVNSVLALAAG---YTTSKCEMTGVVVDVGDGATYVVPVAEGYVIGS 197 (427)
Q Consensus 138 l~e~lfe~~~~~~v~~~~~~~lal~~~---g~~~~~~~tglVVDiG~~~t~v~pV~dG~~l~~ 197 (427)
+.+.+=+.|++| +++.+..-+++++- |. .++. +.++|.+|.+ .-..-|.+|.++..
T Consensus 88 l~~~l~~~~~~p-v~v~NDa~aaa~~e~~~g~-~~~~-~~v~l~~GtG-iG~gii~~G~l~~G 146 (289)
T 2aa4_A 88 LVKTLEQLTNLP-TIAINDAQAAAWAEFQALD-GDIT-DMVFITVSTG-VGGGVVSGCKLLTG 146 (289)
T ss_dssp HHHHHHHHHCSC-EEEEEHHHHHHHHHHHTSC-TTCC-CEEEEEESSS-EEEEEEETTEEECC
T ss_pred hHHHHHHHHCCC-EEEechHHHHHHHHHHhCC-CCCc-eEEEEEeCcc-EEEEEEECCEEeeC
Confidence 344444567888 78888888776653 21 0124 8999999988 56677789988753
No 52
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=26.47 E-value=15 Score=33.45 Aligned_cols=58 Identities=16% Similarity=0.071 Sum_probs=37.9
Q ss_pred HHHHhhhccCCCeEEEechhhhhhhhccC--CCCCcceEEEEEcCCCceEEEEeecceeccc
Q 014312 138 TGEIMFETFNVPGLYIAVNSVLALAAGYT--TSKCEMTGVVVDVGDGATYVVPVAEGYVIGS 197 (427)
Q Consensus 138 l~e~lfe~~~~~~v~~~~~~~lal~~~g~--~~~~~~tglVVDiG~~~t~v~pV~dG~~l~~ 197 (427)
+.+.+-+.|++| |++.+..-+++++-.. ..++..+.++|-+|.+. -..-|.+|.++.-
T Consensus 89 l~~~l~~~~~~p-V~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGi-G~giv~~G~l~~G 148 (297)
T 4htl_A 89 LKEWLEAETGLP-VAIENDANCALLAEKWLGKGQDLDDFLCLTIGTGI-GGGIFSNGELVRG 148 (297)
T ss_dssp HHHHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSE-EEEEEETTEECCC
T ss_pred HHHHHHHHHCcC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECcce-EEEEEECCEEEec
Confidence 334444667898 8888887776554211 01126788999999874 5666779988753
No 53
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=26.21 E-value=29 Score=32.81 Aligned_cols=23 Identities=17% Similarity=0.442 Sum_probs=20.2
Q ss_pred cCeEEecCccCcccHHHHHHHHH
Q 014312 326 KNIVLSGGSTMFKDFHRRLQRDL 348 (427)
Q Consensus 326 ~nIil~GG~s~i~G~~eRL~~eL 348 (427)
..|++|||++.=|-|.+||++.|
T Consensus 285 ~~v~vcGGGa~N~~Lm~~L~~~l 307 (371)
T 3qbx_A 285 EEVLVCGGGAFNTALMKRLAMLM 307 (371)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHC
T ss_pred ceEEEECCccCcHHHHHHHHHhC
Confidence 46999999999999999998666
No 54
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=26.21 E-value=28 Score=33.05 Aligned_cols=75 Identities=20% Similarity=0.202 Sum_probs=42.3
Q ss_pred cCeEEecCccCccc-HHHHHHHHHHHHHHHhhhhhhcccCCccCCCCeeEEEecCCCccceeeecceeeccccc-cc---
Q 014312 326 KNIVLSGGSTMFKD-FHRRLQRDLKKIVDARVLASDARLGGEVKAQPVEVNVVSHAIQRYAVWFGGSVLASTPE-FF--- 400 (427)
Q Consensus 326 ~nIil~GG~s~i~G-~~eRL~~eL~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~W~Ggsilasl~~-f~--- 400 (427)
+.|||+||.+...- |.+++++.+.... .+.|........+.-+||..++.-.. ..
T Consensus 297 ~~IvlgGgi~~~~~~l~~~i~~~l~~~~--------------------~~~i~~~~~~~~a~~~GAa~l~~~~~~~~~~~ 356 (381)
T 1saz_A 297 DFIVLTGGLAHEKEFLVPWITKRVSFIA--------------------PVLVFPGSNEEKALALSALRVLRGEEKPKNYS 356 (381)
T ss_dssp SEEEEEEGGGGCTTTHHHHHHHHHTTTS--------------------CEEEEEBCCHHHHHHHHHHHHHTTSSCCEEHH
T ss_pred CEEEEeCcCccChHHHHHHHHHHHHhhc--------------------CeEEEecCcchhHHHHHHHHHHcCCcccccch
Confidence 46999999876544 7777777765431 23444333333456678877764321 10
Q ss_pred -ccccchHHHhhcCcceeeec
Q 014312 401 -AACHTKAEYEEYGASICRSN 420 (427)
Q Consensus 401 -~~~itk~eY~e~G~~~~~~~ 420 (427)
+---.++.|+-++.-|++++
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~ 377 (381)
T 1saz_A 357 EESRRWRERYDSYLDGILRHH 377 (381)
T ss_dssp HHHHHHHHHHHHHTGGGCC--
T ss_pred hHhHHHHHHHHhhhhhhhhcc
Confidence 01124566777777777554
No 55
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=26.11 E-value=48 Score=30.80 Aligned_cols=26 Identities=12% Similarity=0.339 Sum_probs=22.4
Q ss_pred hcCeEEecCccCcccHHHHHHHHHHH
Q 014312 325 YKNIVLSGGSTMFKDFHRRLQRDLKK 350 (427)
Q Consensus 325 ~~nIil~GG~s~i~G~~eRL~~eL~~ 350 (427)
.++|+|+||.+.=..+.++|.+++..
T Consensus 250 ~~~vvlsGGVa~N~~L~~~L~~~l~~ 275 (334)
T 3eno_A 250 KDEILMAGGVALNRRLRDMVTNMARE 275 (334)
T ss_dssp CSEEEEESSGGGCHHHHHHHHHHHHH
T ss_pred CCeEEEcCCHHHHHHHHHHHHHHHHH
Confidence 36899999999988999999888864
No 56
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=24.86 E-value=32 Score=32.46 Aligned_cols=58 Identities=9% Similarity=0.138 Sum_probs=37.9
Q ss_pred HHHHhhhccCCCeEEEechhhhhhhhccCCCCCcceEEEEEcCCCceEEEEeecceeccc
Q 014312 138 TGEIMFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATYVVPVAEGYVIGS 197 (427)
Q Consensus 138 l~e~lfe~~~~~~v~~~~~~~lal~~~g~~~~~~~tglVVDiG~~~t~v~pV~dG~~l~~ 197 (427)
+.+.+=+.|++| +++.+..-+++++-.....+..+.++|-+|.+ .-..-|.+|.++..
T Consensus 180 l~~~l~~~~~~p-V~v~NDanaaalaE~~~g~~~~~~v~l~~GtG-iG~giv~~G~l~~G 237 (380)
T 2hoe_A 180 LANLLKEKYGIE-VWVENDADMGAVGEKWYTKRDDSFAWILTGKG-IGAGIIIDGELYRG 237 (380)
T ss_dssp HHHHHHHHHCSE-EEEEEHHHHHHHHHHHHTTCCSCEEEEEESSS-CEEEEEETTEECCC
T ss_pred hHHHHHHHhCCC-EEEechHHHHHHHHHHhCCCCCcEEEEEeCCc-eEEEEEECCEEecc
Confidence 334444567887 88888888776653110000268999999987 45667789987754
No 57
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=23.62 E-value=23 Score=32.27 Aligned_cols=58 Identities=19% Similarity=0.188 Sum_probs=37.8
Q ss_pred HHHHhhhccCCCeEEEechhhhhhhhccC--CCCCcceEEEEEcCCCceEEEEeecceeccc
Q 014312 138 TGEIMFETFNVPGLYIAVNSVLALAAGYT--TSKCEMTGVVVDVGDGATYVVPVAEGYVIGS 197 (427)
Q Consensus 138 l~e~lfe~~~~~~v~~~~~~~lal~~~g~--~~~~~~tglVVDiG~~~t~v~pV~dG~~l~~ 197 (427)
+.+.+-+.|++| |++.+..-+++++-.. ..++..+.++|-+|.+. -..-|.+|.++..
T Consensus 90 l~~~l~~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGi-G~gii~~g~l~~G 149 (302)
T 3vov_A 90 IRRILEEATGRP-VFLENDANAAALAEHHLGAAQGEESSLYLTVSTGI-GGGVVLGGRVLRG 149 (302)
T ss_dssp HHHHHHHHHSSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSE-EEEEEETTEECCC
T ss_pred hHHHHHHhhCCC-EEEEechHHHHHHHHHhCCCCCCCCEEEEEECCce-eEEEEECCEEeeC
Confidence 344455677888 7788888777554311 00126788999999874 5556679987754
No 58
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=23.50 E-value=17 Score=33.31 Aligned_cols=24 Identities=17% Similarity=0.148 Sum_probs=19.2
Q ss_pred CCCCCcEEEeCCCccEEEEEcCCC
Q 014312 3 PTSRPAVVIDNGTGYTKMGFAGNV 26 (427)
Q Consensus 3 ~~~~~~vVlD~Gs~~~k~G~ag~~ 26 (427)
||..-.+.||+|...+|+++....
T Consensus 3 ~m~~~~lgiDiggt~~~~~l~d~~ 26 (326)
T 2qm1_A 3 AMDKKIIGIDLGGTTIKFAILTTD 26 (326)
T ss_dssp GGGCEEEEEEECSSEEEEEEEETT
T ss_pred CcccEEEEEEECCCEEEEEEECCC
Confidence 455557899999999999987544
No 59
>2jsh_A Appetite-regulating hormone, obestatin; micellar solution, DPC, SDS, alternative splicing, amidation, lipoprotein, secreted; NMR {Synthetic} PDB: 2jsj_A
Probab=23.43 E-value=19 Score=19.73 Aligned_cols=14 Identities=21% Similarity=0.361 Sum_probs=11.4
Q ss_pred cccchHHHhhcCcc
Q 014312 402 ACHTKAEYEEYGAS 415 (427)
Q Consensus 402 ~~itk~eY~e~G~~ 415 (427)
.-+|-++|+|+|..
T Consensus 9 i~ls~~~y~~yG~~ 22 (26)
T 2jsh_A 9 IKLSGAQYQQHGRA 22 (26)
T ss_dssp GGGHHHHCSCSSSC
T ss_pred eEecHHHHHHHhHH
Confidence 45888999999964
No 60
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=23.23 E-value=46 Score=30.79 Aligned_cols=26 Identities=19% Similarity=0.259 Sum_probs=22.7
Q ss_pred hcCeEEecCccCcccHHHHHHHHHHH
Q 014312 325 YKNIVLSGGSTMFKDFHRRLQRDLKK 350 (427)
Q Consensus 325 ~~nIil~GG~s~i~G~~eRL~~eL~~ 350 (427)
.++|+|+||.++=..+.++|.+.+..
T Consensus 245 ~~~vvlsGGVa~N~~l~~~l~~~l~~ 270 (330)
T 2ivn_A 245 KDEVVLVGGVAANNRLREMLRIMTED 270 (330)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHH
T ss_pred CCeEEEEccHHHHHHHHHHHHHHHHH
Confidence 45899999999999999999988854
No 61
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=22.55 E-value=4e+02 Score=23.47 Aligned_cols=62 Identities=27% Similarity=0.254 Sum_probs=39.9
Q ss_pred eeEEEeCCCCCHHHHHHHHHHhhhccCCCeEEEechhhhhhhhccCCCCCcceEEEEEcCCCceEEEEeecce
Q 014312 121 YFLLTESPLTAPESREYTGEIMFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATYVVPVAEGY 193 (427)
Q Consensus 121 ~vll~e~~~~~~~~r~~l~e~lfe~~~~~~v~~~~~~~lal~~~g~~~~~~~tglVVDiG~~~t~v~pV~dG~ 193 (427)
.+-+..|-..+......+.+.+=+ |+.| +++.+..-+++++... ..+.++|-+|.+. |.+|.
T Consensus 62 ~igi~~~G~~~~~~~~~l~~~l~~-~~~p-v~v~ND~~aaa~~e~~----~~~~v~l~~GTG~-----i~~g~ 123 (299)
T 2e2o_A 62 VVGMGVAGLDSKFDWENFTPLASL-IAPK-VIIQHDGVIALFAETL----GEPGVVVIAGTGS-----VVEGY 123 (299)
T ss_dssp EEEEEETTCCSHHHHHHHHHHHTT-SSSE-EEEEEHHHHHHHHHHT----TSCEEEEEESSSE-----EEEEE
T ss_pred EEEEEcCCCCchhHHHHHHHHHHh-CCCC-EEEeCcHHHHHhhccC----CCCeEEEEecCCE-----EEEEE
Confidence 456666655443333455555545 7766 7788888887776532 4578999999983 45665
No 62
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=21.45 E-value=37 Score=32.07 Aligned_cols=23 Identities=22% Similarity=0.432 Sum_probs=20.0
Q ss_pred cCeEEecCccCcccHHHHHHHHH
Q 014312 326 KNIVLSGGSTMFKDFHRRLQRDL 348 (427)
Q Consensus 326 ~nIil~GG~s~i~G~~eRL~~eL 348 (427)
..|++|||++.=|-|.+||++.|
T Consensus 291 ~~v~vcGGGa~N~~Lm~~L~~~l 313 (370)
T 3cqy_A 291 GELFVCGGGAFNAELMQRLAALL 313 (370)
T ss_dssp EEEEEESGGGGCHHHHHHHHHHC
T ss_pred CEEEEECCCcCCHHHHHHHHHhC
Confidence 36999999999999999997665
Done!