Query 014315
Match_columns 427
No_of_seqs 239 out of 1583
Neff 6.6
Searched_HMMs 46136
Date Fri Mar 29 03:56:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014315.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014315hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1169 Diacylglycerol kinase 100.0 2.1E-67 4.5E-72 549.7 21.4 329 52-426 216-574 (634)
2 KOG0782 Predicted diacylglycer 100.0 4.5E-57 9.7E-62 458.1 15.1 291 79-427 363-656 (1004)
3 KOG1170 Diacylglycerol kinase 100.0 5.1E-45 1.1E-49 381.7 3.1 313 81-427 194-750 (1099)
4 PRK13057 putative lipid kinase 100.0 2.8E-37 6.2E-42 304.7 24.9 216 85-409 1-218 (287)
5 PRK11914 diacylglycerol kinase 100.0 5.5E-37 1.2E-41 305.1 26.4 231 79-410 6-239 (306)
6 PRK13059 putative lipid kinase 100.0 3.4E-37 7.3E-42 305.5 24.3 221 82-410 2-226 (295)
7 TIGR03702 lip_kinase_YegS lipi 100.0 1.9E-36 4E-41 299.8 23.7 222 83-408 1-224 (293)
8 PRK13055 putative lipid kinase 100.0 3.5E-36 7.5E-41 303.2 25.0 227 81-409 2-231 (334)
9 PRK13337 putative lipid kinase 100.0 4.4E-36 9.6E-41 298.6 24.8 225 82-410 2-228 (304)
10 PRK13054 lipid kinase; Reviewe 100.0 8.3E-36 1.8E-40 296.1 25.9 224 80-407 2-227 (300)
11 PRK00861 putative lipid kinase 100.0 3.5E-35 7.7E-40 291.4 26.2 224 81-410 2-227 (300)
12 TIGR00147 lipid kinase, YegS/R 100.0 4.5E-35 9.8E-40 289.3 24.6 225 82-410 2-229 (293)
13 COG1597 LCB5 Sphingosine kinas 100.0 6.5E-34 1.4E-38 282.7 25.0 225 81-408 2-228 (301)
14 PLN02958 diacylglycerol kinase 100.0 2.3E-33 5E-38 294.7 24.8 237 80-411 110-394 (481)
15 PRK12361 hypothetical protein; 100.0 2.1E-32 4.5E-37 292.4 24.6 227 81-408 242-470 (547)
16 PF00609 DAGK_acc: Diacylglyce 100.0 1E-33 2.2E-38 257.3 9.9 140 276-427 2-141 (161)
17 PLN02204 diacylglycerol kinase 100.0 1.7E-28 3.6E-33 258.9 24.9 184 79-320 157-412 (601)
18 PF00781 DAGK_cat: Diacylglyce 99.9 2.9E-23 6.3E-28 181.6 12.4 122 83-229 1-128 (130)
19 smart00046 DAGKc Diacylglycero 99.9 3.5E-22 7.6E-27 173.9 11.4 100 85-199 1-101 (124)
20 KOG1116 Sphingosine kinase, in 99.8 1.9E-19 4E-24 187.5 16.1 174 81-320 179-358 (579)
21 smart00045 DAGKa Diacylglycero 99.8 2.6E-20 5.6E-25 169.0 7.9 138 276-427 2-139 (160)
22 KOG1115 Ceramide kinase [Lipid 99.4 1.1E-12 2.4E-17 131.3 11.2 248 81-414 158-438 (516)
23 KOG4435 Predicted lipid kinase 98.8 7E-08 1.5E-12 97.1 12.9 132 81-227 60-197 (535)
24 PRK03708 ppnK inorganic polyph 98.2 1.1E-05 2.3E-10 79.9 10.4 113 83-221 2-115 (277)
25 PRK02645 ppnK inorganic polyph 98.1 2E-05 4.4E-10 79.0 11.3 123 80-230 2-127 (305)
26 PRK03378 ppnK inorganic polyph 97.7 0.00027 5.8E-09 70.5 10.8 124 81-229 5-130 (292)
27 COG3199 Predicted inorganic po 97.4 0.0014 3E-08 65.9 11.7 58 148-218 100-157 (355)
28 PRK01231 ppnK inorganic polyph 97.2 0.0038 8.2E-08 62.4 11.8 122 81-230 4-130 (295)
29 PF01513 NAD_kinase: ATP-NAD k 96.9 0.0033 7.1E-08 62.4 7.9 69 147-229 75-143 (285)
30 PRK02155 ppnK NAD(+)/NADH kina 96.8 0.016 3.4E-07 57.9 11.9 124 81-230 5-131 (291)
31 PRK14077 pnk inorganic polypho 96.7 0.022 4.8E-07 56.7 12.5 123 78-228 7-130 (287)
32 PRK03372 ppnK inorganic polyph 96.7 0.027 5.9E-07 56.6 12.9 127 80-225 4-135 (306)
33 PRK04539 ppnK inorganic polyph 96.3 0.07 1.5E-06 53.4 12.9 127 81-229 5-135 (296)
34 PRK02649 ppnK inorganic polyph 96.3 0.06 1.3E-06 54.1 12.4 120 82-221 2-127 (305)
35 PRK03501 ppnK inorganic polyph 96.2 0.088 1.9E-06 51.9 12.8 105 82-229 3-108 (264)
36 PRK01911 ppnK inorganic polyph 96.0 0.11 2.5E-06 51.8 12.9 68 148-229 64-131 (292)
37 PLN02935 Bifunctional NADH kin 95.8 0.14 3E-06 54.6 12.8 125 78-221 191-321 (508)
38 PRK00561 ppnK inorganic polyph 95.2 0.26 5.5E-06 48.5 11.6 67 149-229 34-101 (259)
39 PRK14075 pnk inorganic polypho 95.1 0.36 7.8E-06 47.3 12.5 67 148-231 41-107 (256)
40 PRK04885 ppnK inorganic polyph 94.8 0.38 8.2E-06 47.4 11.7 97 84-224 3-99 (265)
41 PRK14076 pnk inorganic polypho 94.6 0.35 7.6E-06 52.7 12.0 59 149-221 349-407 (569)
42 PRK01185 ppnK inorganic polyph 93.8 0.53 1.1E-05 46.6 10.5 114 83-229 2-116 (271)
43 PLN02727 NAD kinase 93.2 0.69 1.5E-05 52.5 11.1 125 76-220 673-801 (986)
44 PRK02231 ppnK inorganic polyph 92.2 0.97 2.1E-05 44.7 9.6 60 148-221 42-102 (272)
45 PLN02929 NADH kinase 92.0 1 2.2E-05 45.3 9.5 66 148-221 64-140 (301)
46 PF10254 Pacs-1: PACS-1 cytoso 90.0 1.4 3.1E-05 46.0 8.7 48 148-196 75-128 (414)
47 PRK04761 ppnK inorganic polyph 89.1 0.56 1.2E-05 45.8 4.7 58 148-218 25-82 (246)
48 cd08197 DOIS 2-deoxy-scyllo-in 86.3 3.2 7E-05 42.6 8.5 39 149-189 85-125 (355)
49 cd08180 PDD 1,3-propanediol de 84.9 7.8 0.00017 39.1 10.5 44 148-192 78-127 (332)
50 COG0061 nadF NAD kinase [Coenz 84.6 5.7 0.00012 39.4 9.1 71 148-232 55-125 (281)
51 cd08176 LPO Lactadehyde:propan 84.0 5.5 0.00012 41.0 9.1 49 148-197 85-150 (377)
52 TIGR03405 Phn_Fe-ADH phosphona 83.1 7.7 0.00017 39.7 9.7 103 82-195 24-147 (355)
53 cd08169 DHQ-like Dehydroquinat 81.4 7.5 0.00016 39.7 8.8 97 82-190 24-125 (344)
54 cd08179 NADPH_BDH NADPH-depend 80.3 7.4 0.00016 40.0 8.4 47 148-195 81-147 (375)
55 PF00731 AIRC: AIR carboxylase 77.7 9.9 0.00021 34.4 7.3 81 93-187 8-89 (150)
56 cd08181 PPD-like 1,3-propanedi 76.9 15 0.00034 37.4 9.5 48 148-196 83-146 (357)
57 PRK09860 putative alcohol dehy 76.8 18 0.00038 37.5 9.9 126 59-197 5-153 (383)
58 PRK00002 aroB 3-dehydroquinate 75.9 12 0.00026 38.3 8.3 92 81-184 31-126 (358)
59 cd08195 DHQS Dehydroquinate sy 75.6 11 0.00024 38.3 8.0 91 82-184 25-119 (345)
60 PRK10624 L-1,2-propanediol oxi 74.7 21 0.00046 36.8 9.9 48 148-196 87-153 (382)
61 cd08172 GlyDH-like1 Glycerol d 74.2 22 0.00047 36.2 9.7 92 82-193 24-119 (347)
62 cd08186 Fe-ADH8 Iron-containin 74.0 12 0.00027 38.5 8.0 48 148-196 84-149 (383)
63 cd08551 Fe-ADH iron-containing 73.7 17 0.00036 37.2 8.8 48 148-196 80-144 (370)
64 TIGR02638 lactal_redase lactal 73.3 17 0.00036 37.5 8.7 125 59-196 3-152 (379)
65 cd07766 DHQ_Fe-ADH Dehydroquin 73.0 19 0.00041 36.1 8.8 38 148-187 78-117 (332)
66 KOG4180 Predicted kinase [Gene 72.4 2 4.3E-05 43.4 1.5 64 147-221 104-169 (395)
67 cd08185 Fe-ADH1 Iron-containin 71.8 22 0.00047 36.6 9.2 49 148-197 83-153 (380)
68 cd08187 BDH Butanol dehydrogen 71.8 20 0.00043 37.0 8.9 126 59-197 3-151 (382)
69 TIGR01357 aroB 3-dehydroquinat 71.0 19 0.00041 36.5 8.4 91 82-184 21-115 (344)
70 PRK09423 gldA glycerol dehydro 70.4 17 0.00037 37.3 7.9 117 58-195 3-129 (366)
71 cd08173 Gro1PDH Sn-glycerol-1- 70.3 21 0.00045 36.1 8.5 87 82-188 26-114 (339)
72 cd08194 Fe-ADH6 Iron-containin 68.0 31 0.00067 35.4 9.3 44 148-192 80-140 (375)
73 cd08171 GlyDH-like2 Glycerol d 67.6 18 0.00039 36.8 7.4 40 148-191 78-119 (345)
74 PRK15138 aldehyde reductase; P 66.4 30 0.00064 35.9 8.8 124 59-196 5-152 (387)
75 cd08170 GlyDH Glycerol dehydro 66.2 18 0.0004 36.7 7.2 44 148-195 77-122 (351)
76 cd08192 Fe-ADH7 Iron-containin 63.9 33 0.00072 35.1 8.6 45 148-193 81-146 (370)
77 cd08188 Fe-ADH4 Iron-containin 63.4 29 0.00062 35.8 8.0 47 148-195 85-148 (377)
78 PLN00180 NDF6 (NDH-dependent f 61.5 1.7 3.7E-05 39.1 -1.2 14 154-167 130-143 (180)
79 PTZ00286 6-phospho-1-fructokin 60.8 25 0.00054 37.5 7.1 48 149-198 177-230 (459)
80 TIGR02483 PFK_mixed phosphofru 59.8 29 0.00063 35.3 7.1 38 149-191 95-132 (324)
81 cd08177 MAR Maleylacetate redu 59.4 51 0.0011 33.4 8.9 88 82-189 24-115 (337)
82 PRK15454 ethanol dehydrogenase 59.1 52 0.0011 34.2 9.1 49 148-197 106-171 (395)
83 cd08199 EEVS 2-epi-5-epi-valio 59.0 44 0.00096 34.2 8.4 33 150-184 90-122 (354)
84 cd08189 Fe-ADH5 Iron-containin 58.8 47 0.001 34.1 8.6 48 148-196 83-148 (374)
85 cd08184 Fe-ADH3 Iron-containin 58.6 77 0.0017 32.4 10.1 48 148-196 81-145 (347)
86 cd08550 GlyDH-like Glycerol_de 58.4 36 0.00079 34.5 7.7 42 148-193 77-120 (349)
87 cd08183 Fe-ADH2 Iron-containin 57.8 54 0.0012 33.6 8.9 95 82-195 23-142 (374)
88 TIGR02482 PFKA_ATP 6-phosphofr 57.4 41 0.00089 33.8 7.7 39 149-191 92-130 (301)
89 PRK00843 egsA NAD(P)-dependent 56.7 53 0.0011 33.5 8.5 37 149-189 88-124 (350)
90 PLN02834 3-dehydroquinate synt 54.6 52 0.0011 34.8 8.2 93 81-185 100-198 (433)
91 cd08178 AAD_C C-terminal alcoh 54.2 70 0.0015 33.2 9.0 48 148-196 78-153 (398)
92 cd01836 FeeA_FeeB_like SGNH_hy 53.8 26 0.00057 31.5 5.3 60 150-217 43-102 (191)
93 cd08182 HEPD Hydroxyethylphosp 52.7 87 0.0019 32.0 9.4 45 148-193 77-142 (367)
94 PRK06830 diphosphate--fructose 52.4 35 0.00076 36.2 6.5 49 149-197 173-225 (443)
95 PLN02564 6-phosphofructokinase 52.0 37 0.0008 36.5 6.6 41 149-191 177-220 (484)
96 cd00363 PFK Phosphofructokinas 51.3 46 0.001 34.0 7.0 43 149-191 93-136 (338)
97 cd00763 Bacterial_PFK Phosphof 50.2 54 0.0012 33.2 7.2 38 149-191 93-130 (317)
98 cd04502 SGNH_hydrolase_like_7 48.8 19 0.0004 32.0 3.3 61 151-218 26-86 (171)
99 cd08175 G1PDH Glycerol-1-phosp 48.0 70 0.0015 32.4 7.8 34 148-185 80-113 (348)
100 PF12219 End_tail_spike: Catal 47.0 9.6 0.00021 33.7 1.1 14 149-162 85-98 (160)
101 cd08174 G1PDH-like Glycerol-1- 46.8 1.6E+02 0.0035 29.6 10.1 36 149-188 76-111 (331)
102 cd08193 HVD 5-hydroxyvalerate 46.7 1.2E+02 0.0027 31.0 9.4 45 148-193 83-144 (376)
103 PRK14072 6-phosphofructokinase 44.4 63 0.0014 34.0 6.9 42 149-191 104-147 (416)
104 PF00465 Fe-ADH: Iron-containi 43.1 64 0.0014 32.9 6.7 99 83-197 23-144 (366)
105 COG1979 Uncharacterized oxidor 41.5 1.4E+02 0.003 30.7 8.4 88 59-157 5-94 (384)
106 PRK03202 6-phosphofructokinase 41.3 83 0.0018 31.9 7.0 38 149-191 94-131 (320)
107 cd08196 DHQS-like1 Dehydroquin 41.2 1.9E+02 0.0041 29.6 9.6 91 82-184 20-110 (346)
108 cd08191 HHD 6-hydroxyhexanoate 40.6 1.7E+02 0.0036 30.2 9.3 47 148-195 79-142 (386)
109 cd08549 G1PDH_related Glycerol 39.8 1.2E+02 0.0026 30.6 8.0 34 148-185 80-113 (332)
110 PRK06203 aroB 3-dehydroquinate 39.5 1.7E+02 0.0036 30.5 9.1 92 81-184 42-145 (389)
111 PLN02884 6-phosphofructokinase 38.6 78 0.0017 33.3 6.5 41 149-191 144-187 (411)
112 KOG2178 Predicted sugar kinase 37.0 18 0.00039 37.6 1.4 59 148-220 168-226 (409)
113 PRK06555 pyrophosphate--fructo 36.9 79 0.0017 33.2 6.2 41 149-191 113-156 (403)
114 cd08198 DHQS-like2 Dehydroquin 36.8 2.2E+02 0.0049 29.4 9.4 36 148-185 99-134 (369)
115 PRK13805 bifunctional acetalde 36.4 2.2E+02 0.0048 32.8 10.3 98 58-168 455-558 (862)
116 PRK10586 putative oxidoreducta 35.5 1.8E+02 0.004 29.8 8.6 37 149-189 87-123 (362)
117 PRK05948 precorrin-2 methyltra 34.8 4.3E+02 0.0092 25.5 10.5 48 148-197 92-144 (238)
118 PRK14071 6-phosphofructokinase 32.6 1.6E+02 0.0036 30.3 7.6 45 149-197 108-155 (360)
119 cd02007 TPP_DXS Thiamine pyrop 32.6 1.5E+02 0.0032 27.6 6.7 65 149-216 97-177 (195)
120 COG1691 NCAIR mutase (PurE)-re 31.7 75 0.0016 30.8 4.5 33 149-187 174-206 (254)
121 PRK07085 diphosphate--fructose 31.6 1.2E+02 0.0026 33.2 6.7 41 149-191 165-208 (555)
122 PLN03028 pyrophosphate--fructo 31.2 1.1E+02 0.0025 33.8 6.5 47 149-197 174-228 (610)
123 TIGR03590 PseG pseudaminic aci 31.0 2.6E+02 0.0056 27.3 8.6 35 141-184 234-268 (279)
124 cd01831 Endoglucanase_E_like E 31.0 73 0.0016 28.2 4.3 49 149-218 45-93 (169)
125 cd01841 NnaC_like NnaC (CMP-Ne 31.0 43 0.00094 29.6 2.8 61 150-217 26-86 (174)
126 TIGR02477 PFKA_PPi diphosphate 30.7 1.1E+02 0.0024 33.4 6.2 42 149-192 162-206 (539)
127 cd01844 SGNH_hydrolase_like_6 30.4 79 0.0017 28.2 4.5 58 150-219 34-91 (177)
128 PF00365 PFK: Phosphofructokin 29.1 75 0.0016 31.6 4.4 40 149-192 93-132 (282)
129 PF13685 Fe-ADH_2: Iron-contai 27.4 86 0.0019 30.7 4.3 38 148-189 75-112 (250)
130 TIGR02478 6PF1K_euk 6-phosphof 27.2 1.7E+02 0.0036 33.4 7.1 43 149-191 479-523 (745)
131 TIGR03846 sulfopy_beta sulfopy 26.3 2E+02 0.0044 26.3 6.4 77 149-225 59-153 (181)
132 cd00765 Pyrophosphate_PFK Phos 23.9 1.7E+02 0.0038 32.0 6.2 43 149-193 167-212 (550)
133 cd00764 Eukaryotic_PFK Phospho 23.4 3.8E+02 0.0082 30.7 8.9 42 149-191 479-523 (762)
134 cd01840 SGNH_hydrolase_yrhL_li 23.0 2.4E+02 0.0051 24.5 6.0 52 152-216 25-77 (150)
135 TIGR02478 6PF1K_euk 6-phosphof 22.2 2.7E+02 0.0058 31.7 7.5 43 149-191 95-155 (745)
136 cd01830 XynE_like SGNH_hydrola 21.1 1.1E+02 0.0023 28.1 3.5 42 152-194 44-91 (204)
137 PTZ00287 6-phosphofructokinase 21.0 2.3E+02 0.0049 34.5 6.8 76 122-217 914-995 (1419)
138 PLN02251 pyrophosphate-depende 20.8 2.4E+02 0.0051 31.1 6.5 44 149-194 191-237 (568)
139 PRK10528 multifunctional acyl- 20.6 1E+02 0.0022 28.2 3.2 57 154-217 50-106 (191)
140 COG0205 PfkA 6-phosphofructoki 20.5 5.2E+02 0.011 26.7 8.6 39 149-191 95-133 (347)
141 TIGR01162 purE phosphoribosyla 20.4 4.4E+02 0.0096 24.0 7.2 32 150-187 56-87 (156)
142 cd00954 NAL N-Acetylneuraminic 20.4 3.3E+02 0.0071 26.8 7.1 47 60-106 101-154 (288)
143 cd01822 Lysophospholipase_L1_l 20.1 1.2E+02 0.0025 26.6 3.5 59 153-218 42-100 (177)
No 1
>KOG1169 consensus Diacylglycerol kinase [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-67 Score=549.68 Aligned_cols=329 Identities=34% Similarity=0.633 Sum_probs=271.5
Q ss_pred ccccccccccccCceeecCCccc--------------------------ccCCCCCCcEEEEEcCccCCCChHHHHHHHH
Q 014315 52 PKSKILNNYYIPNYILVSGSEVQ--------------------------RSSLIPSCPVLVFINSKSGGQLGGKLLLTYR 105 (427)
Q Consensus 52 ~~~~~~~~~~ip~~~~~~~~~~~--------------------------~~~~~~~~~v~vivNp~SG~~~g~~~~~~~~ 105 (427)
+.+..+++.++||+++.+..... .....+.+|++|||||||||++|..++.+++
T Consensus 216 ~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PLlVfvNpKSGg~~G~~ll~~f~ 295 (634)
T KOG1169|consen 216 CDLGELKDHILPPSTLRPARTARVASDHSGLPGEKSEEVTDAKKMQQLLVTDPPDWRPLLVFVNPKSGGQQGERLLRRFR 295 (634)
T ss_pred ccChhhhhccCCceeeecccccccccccccccccccccccccccccccccCCCCCCcceEEEEecCCcccccHHHHHHHH
Confidence 34555899999999887764331 2334557999999999999999999999999
Q ss_pred HhhccCceEEeeccC-chhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCC---CCCCEEE
Q 014315 106 SLLNENQVIDLGEKA-PDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLP---HSPPVAT 181 (427)
Q Consensus 106 ~~L~~~qv~dl~~~~-p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGDGTv~~Vln~l~~~~~~---~~~plgi 181 (427)
.+||+.|||||...+ |...+. +++.+ ...||+||||||||+|||+.+.+++.. ..|||||
T Consensus 296 ~lLnp~QVfdl~~~~~p~~gL~-l~~~~---------------~~~riLVcGGDGTvGWVL~~i~~~n~~~~~~~PpVAi 359 (634)
T KOG1169|consen 296 YLLNPVQVFDLLKRGGPRPGLT-LFRDV---------------PDFRILVCGGDGTVGWVLGCIDKLNKQNAIPPPPVAI 359 (634)
T ss_pred HhcChhhEEecccCCCCchhHH-HHHhC---------------CcceEEEecCCCcchhhhhhHHHhhccccCCCCCeEE
Confidence 999999999999874 888775 33332 246999999999999999999986533 4799999
Q ss_pred EeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEeeeecCCCCCCCCCCCCCCCCcccccccccccc
Q 014315 182 VPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGSFDPIAPLELPHSLHAFHRVSQK 261 (427)
Q Consensus 182 IPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~r~~~~ 261 (427)
+|+||||||||+|+||.+|++.+.. +.++|++|..|.+.++|+|+|.+.+.... . . +.+.+..
T Consensus 360 lPLGTGNDLsR~l~WGgg~~g~~~~-~~~iL~~i~~a~v~~lDrW~v~v~~~~~~---~--~-----~~~~~~~------ 422 (634)
T KOG1169|consen 360 LPLGTGNDLSRVLRWGGGYPGEDRN-LIKILKDIEEAPVTKLDRWKVLVEPQSGE---L--V-----QYSLKPP------ 422 (634)
T ss_pred EecCCCCchHhhcCCCCCCCcchhh-HHHHHHhhhhccceecceeeEEeeccccc---c--c-----cccccCC------
Confidence 9999999999999999999997655 99999999999999999999998764321 0 0 0000000
Q ss_pred cccccCCcceeccceeeeeccChhHHHHHHHhhccccCccchhcccchhhHHHHHHHhhhcccccccCCCCcCcCceEEE
Q 014315 262 DKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKV 341 (427)
Q Consensus 262 ~~~~~~~~~~~~r~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~~~~~~~~~l~~~~~k~~~~~i~l 341 (427)
. .+...+..+|+||||||+||+|+++||..|+++|++|+||+.||++|+.+|++. ||+++ |++++..+++
T Consensus 423 ~----~~~~~~~~imnNYFSIGvDA~Ia~~FH~~Re~~PekF~Sr~~NKl~Yf~~G~q~-~f~~~-----ck~~~~~i~i 492 (634)
T KOG1169|consen 423 E----KGDPVPYGIMNNYFSIGVDAQIAYGFHNMREKNPEKFNSRMKNKLWYFEFGTQE-TFAAR-----CKNLHLHIKI 492 (634)
T ss_pred C----cCCCCCeeeEeeeeeecccHHHHHHHHHHhhhChHhhcchhhceeeeeeecchh-hHHHh-----hcCCccceEE
Confidence 0 011133357999999999999999999999999999999999999999999876 66654 4454334566
Q ss_pred EEEecCCcEEEEeecCceeEEEEEcCCCCcCCCCCCCCcccccccccCCCCCCCCCCeEEEEEEecchhhHHHhcCCCcc
Q 014315 342 KIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLLEIVGFRDAWHGLVLLAPNGHG 421 (427)
Q Consensus 342 ~v~~~dg~~~~i~l~~~~~~ivv~N~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dDG~LEVv~v~~~~h~~~~~~~~~~~ 421 (427)
++ +++|+.+++|.++++|+++|+||||||.++|++.++.+...+.+.++..|||++|||+|++.||++++|+++.++
T Consensus 493 ~~---~~d~~dl~~p~sleGIv~LNIpS~ggG~nlWg~~~~~~~~~~~~~~~d~~dgliEvvgv~~~~h~~~~qvgL~~a 569 (634)
T KOG1169|consen 493 EL---DGDGEDLELPKSLEGIVVLNIPSWGGGSNLWGNSNKSKGNFRGFSEADDDDGLIEVVGVQDSWHLLQEQVGLESA 569 (634)
T ss_pred EE---cccceEccCCCCceeEEEEcccccccCcccccccCccccccccccccCCCcCeEEEEEeccchhhhhhhhccchh
Confidence 66 566668999889999999999999999999998877776777788888999999999999999999999999999
Q ss_pred ccccc
Q 014315 422 TRLAQ 426 (427)
Q Consensus 422 ~rlaQ 426 (427)
+||||
T Consensus 570 ~rigQ 574 (634)
T KOG1169|consen 570 LRIGQ 574 (634)
T ss_pred hHHHH
Confidence 99998
No 2
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-57 Score=458.10 Aligned_cols=291 Identities=37% Similarity=0.656 Sum_probs=240.8
Q ss_pred CCCCcEEEEEcCccCCCChHHHHHHHHHhhccCceEEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 014315 79 IPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 158 (427)
Q Consensus 79 ~~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGD 158 (427)
.+++|++|||||||||++|.+++..+..+||+.||||++..+|..+++ +++.+ ..+||++||||
T Consensus 363 plmkPLLVFVNPKSGGNqGsK~lq~f~WyLNPRQVFDlsq~GPK~aLE-myRKV---------------~nLRILaCGGD 426 (1004)
T KOG0782|consen 363 PLMKPLLVFVNPKSGGNQGSKALQTFCWYLNPRQVFDLSQLGPKFALE-MYRKV---------------VNLRILACGGD 426 (1004)
T ss_pred CCCCceEEEecCCCCCcchHHHHHHHHHhcChhhheehhccCcHHHHH-HHHhc---------------cceEEEEecCC
Confidence 446999999999999999999999999999999999999999999986 66664 25899999999
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEeeeecCCCCC
Q 014315 159 GTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEG 238 (427)
Q Consensus 159 GTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~~g 238 (427)
|||+|+|..|+++++.+.||+||+|+||||||||.|+||.+|. ++.+.++|..+.++.++.+|+|.+.+.+..
T Consensus 427 GTVGWiLStLD~L~l~p~PPvailPLGTGNDLARtlnWGGgyt---DEPvSkil~~ve~gtvVqLDRW~lhvEpNp---- 499 (1004)
T KOG0782|consen 427 GTVGWILSTLDNLNLPPYPPVAILPLGTGNDLARTLNWGGGYT---DEPVSKILQAVEHGTVVQLDRWRLHVEPNP---- 499 (1004)
T ss_pred CceeehhhhhhhcCCCCCCCeeEeecCCcchHHHhcccCCCcC---cchHHHHHHHHhcCcEEeeeeeeecccCCC----
Confidence 9999999999999988999999999999999999999998654 357899999999999999999999876532
Q ss_pred CCCCCCCCCCCcccccccccccccccccCCcceeccceeeeeccChhHHHHHHHhhccccCccchhcccchhhHHHHHHH
Q 014315 239 SFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAG 318 (427)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~r~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~ 318 (427)
+|.+ -|...+ -.+.+.+ + .|+||||+||||.|++.||.+|+.+|++|++|++||+.|.-.++
T Consensus 500 ~~~p---Ee~ddG--------~~~~LPL----~---VfnNYFSlGfDAHVtLeFHeSReANPekfNSRfrNkmfYaG~af 561 (1004)
T KOG0782|consen 500 SCNP---EEEDDG--------MQSALPL----T---VFNNYFSLGFDAHVTLEFHESREANPEKFNSRFRNKMFYAGLAF 561 (1004)
T ss_pred CCCh---hhhccc--------chhccch----h---HhhccccccccceEEEEeccccccCHHHHHHHHhhhhhhcchhH
Confidence 1110 000000 0011111 1 59999999999999999999999999999999999999999999
Q ss_pred hhhcccccccCCCCcCcCceEEEEEEecCCc---EEEEeecCceeEEEEEcCCCCcCCCCCCCCcccccccccCCCCCCC
Q 014315 319 TQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQ---WEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYV 395 (427)
Q Consensus 319 ~~~~~~~~l~~~~~k~~~~~i~l~v~~~dg~---~~~i~l~~~~~~ivv~N~~s~GGG~~~w~~~~~~~~~~~~~~~a~~ 395 (427)
.. ++..++|++.+.++|.+ ||. .+.-++ +...|+++|+|+|.+|..+|+.|.+. -+|.+++.
T Consensus 562 sD------fl~rSskDL~khi~vvC---DG~DlTPkIqeL--K~qCivFlNIprYcaGTmPWG~pgdh----hDfePqrh 626 (1004)
T KOG0782|consen 562 SD------FLKRSSKDLCKHITVVC---DGVDLTPKIQEL--KLQCIVFLNIPRYCAGTMPWGEPGDH----HDFEPQRH 626 (1004)
T ss_pred HH------HHhhhhHHhhhheEEEe---cCccCChhhhhc--ccceEEEecchhhhcCccCCCCCCcc----ccCCcccc
Confidence 98 55567788888888887 663 111122 45789999999999999999987532 36778999
Q ss_pred CCCeEEEEEEecchhhHHHhcCCCcccccccC
Q 014315 396 DDGLLEIVGFRDAWHGLVLLAPNGHGTRLAQV 427 (427)
Q Consensus 396 dDG~LEVv~v~~~~h~~~~~~~~~~~~rlaQ~ 427 (427)
|||++||++|.-.+ ++.+|++ |||-||+||
T Consensus 627 dDGyvEViGFTmas-LAALQvG-GhGERl~QC 656 (1004)
T KOG0782|consen 627 DDGYVEVIGFTMAS-LAALQVG-GHGERLAQC 656 (1004)
T ss_pred CCceEEEEeeeHHH-HHHHhhc-Ccchhhhhc
Confidence 99999999998764 6666665 899999997
No 3
>KOG1170 consensus Diacylglycerol kinase [Lipid transport and metabolism]
Probab=100.00 E-value=5.1e-45 Score=381.73 Aligned_cols=313 Identities=32% Similarity=0.570 Sum_probs=245.5
Q ss_pred CCcEEEEEcCccCCCChHHHHHHHHHhhccCceEEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchH
Q 014315 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGT 160 (427)
Q Consensus 81 ~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGDGT 160 (427)
.+|++||+|.+||..+|.+++++++++|++.||||+...+|.-+++ .+..+ +..+|+||||||+
T Consensus 194 ~spllv~insksgd~qg~~~lrkfkq~lnp~qVfdll~~gp~~gL~-~f~~~---------------d~friLvcggdGs 257 (1099)
T KOG1170|consen 194 GSPLLVFINSKSGDSQGQRFLRKFKQILNPIQVFDLIAGGPDFGLT-FFSHF---------------ESFRILVCGGDGS 257 (1099)
T ss_pred CCceeEeecccCCCchhHHHHHhhhhhcCHHHHHHHHccCcchhhh-hhhcc---------------cceEEEEecCCCC
Confidence 3899999999999999999999999999999999999989988875 44443 3579999999999
Q ss_pred HHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEeeeecCCCC---
Q 014315 161 ASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKE--- 237 (427)
Q Consensus 161 v~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~~--- 237 (427)
|+||+..++.+.+..+..++++|+|||||+||+||||..++.+ .-+.++++....+.++.+|+|.|........+
T Consensus 258 v~wvls~~ds~~lh~kcql~vlplgtgndlarvlgwg~a~~dd--t~~p~il~~~eRastkmldrwsvm~~e~~~~~~~~ 335 (1099)
T KOG1170|consen 258 VGWVLSAIDRLNLHSKCQLAVLPLGTGNDLARVLGWGHAFYDD--TLLPQILRTMERASTKMLDRWSVMAIEGPQADAVR 335 (1099)
T ss_pred CcchHHHHHhccchhhcccccccCCChHHHHHHhcccccCchh--hccHHHHHHHHhhhhhhhhcchhhhhhccccchHH
Confidence 9999999998887788999999999999999999999765543 23448899999999999999987431100000
Q ss_pred ------------CCCCCCCC------------------------------------------------------------
Q 014315 238 ------------GSFDPIAP------------------------------------------------------------ 245 (427)
Q Consensus 238 ------------g~~~~~~~------------------------------------------------------------ 245 (427)
+.-+.|-+
T Consensus 336 ~~~~~v~~~~~~~e~~~i~~~e~q~~t~l~kiL~s~~~t~~i~~~~~~c~~~~~f~~k~~ka~~s~~~nl~~s~a~~~k~ 415 (1099)
T KOG1170|consen 336 RYIEKVETFLEAEETWDIIHAENQLATTLRKILHSVSHTYSILENNTLCTKREDFVKKRSKATPSVLSNLSSSSACSPKC 415 (1099)
T ss_pred HHHHHHHHhcccchhhhhhhhhhhhhhhHHhhhccccchhhhhhhccccchHHHHHHHHhhcccchhccCCchhhccccC
Confidence 00000000
Q ss_pred --------------------------------------------------------------------------------
Q 014315 246 -------------------------------------------------------------------------------- 245 (427)
Q Consensus 246 -------------------------------------------------------------------------------- 245 (427)
T Consensus 416 spa~e~~~~~~~~~~~es~assv~~~~t~~~~~~l~~gt~~~~~~g~t~~p~~~~~~~~~~~i~~~r~eL~~kans~kks 495 (1099)
T KOG1170|consen 416 SPAGEDLPQLFEILHSESSASSVLTALSARTYDELEIGTVHPPTPGATREPSTAYDDDEENEIVENRKELDQKANSLKKS 495 (1099)
T ss_pred CccccchhHHHHHhhhhhhhhhccCCCchhhhhhhhhccccCCCCCccCCCCccccchhhhhhcccHHHHhHHhhhhhcc
Confidence
Q ss_pred -----------CCCC---------c--------ccccc----------------------cccc----------------
Q 014315 246 -----------LELP---------H--------SLHAF----------------------HRVS---------------- 259 (427)
Q Consensus 246 -----------~~~~---------~--------~~~~~----------------------~r~~---------------- 259 (427)
++.| . +.+.. .|.+
T Consensus 496 ~s~~i~~te~a~De~~~~~~~~L~eseekm~~ks~~~~~~se~d~~~~~~s~~~~~~spl~rl~s~~~ls~ggs~~s~~~ 575 (1099)
T KOG1170|consen 496 VSTIIDITEGAPDEPRIYSDTTLNESEEKMKSKSLHPICSSEDDMKQHSDSSLYADYSPLERLSSGGGLSAGGSTLSPAR 575 (1099)
T ss_pred HHHhHHHhhcCCCcccccchhhhhhhHhhhhhccCCCcccCccccccccchhhccccchhhccCCCCCcccCccccCccc
Confidence 0000 0 00000 0000
Q ss_pred --cccccc--------------cCCcc-e----ec--cceeeeeccChhHHHHHHHhhccccCccchhcccchhhHHHHH
Q 014315 260 --QKDKLN--------------VEGHH-T----FR--GGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKL 316 (427)
Q Consensus 260 --~~~~~~--------------~~~~~-~----~~--r~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~ 316 (427)
..+.++ +.+.| . |. =.|+||||||+||.|++.||..|+.||+++.+|.+|+++|...
T Consensus 576 ~~d~dtl~al~~~~~~p~~d~g~seS~L~sa~~y~EkCVMNNYFGIGlDAKISLDFhnKReEhPeKcrSR~kn~MWYGvL 655 (1099)
T KOG1170|consen 576 ASDSDTLSALKERKRTPGSDLGLSESHLRSAGQYKEKCVMNNYFGIGLDAKISLDFHNKREEHPEKCRSRSKNFMWYGVL 655 (1099)
T ss_pred ccccchhhhhhccccCCcccccccccccccccchhhhhhhccccccccceeEeeecccccccChHHHhHHhhhcchhhhc
Confidence 000000 00000 0 10 1499999999999999999999999999999999999999999
Q ss_pred HHhhhcccccccCCCCcCcCceEEEEEEecCCcEEEEeecCceeEEEEEcCCCCcCCCCCCCCcccccccccCCCCCCCC
Q 014315 317 AGTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVD 396 (427)
Q Consensus 317 g~~~~~~~~~l~~~~~k~~~~~i~l~v~~~dg~~~~i~l~~~~~~ivv~N~~s~GGG~~~w~~~~~~~~~~~~~~~a~~d 396 (427)
|.|+ |+|++||++.+++++++ ||+ .+++| ++.+|||+|||||.||.|+|+..+ .++.|..+++|
T Consensus 656 GtKe------LLhrTyrnLEQRV~LEC---DG~--~i~lP-~LQGIviLNIpSyaGGtNFWGsnk----~dd~f~apSfD 719 (1099)
T KOG1170|consen 656 GTKE------LLHRTYRNLEQRVKLEC---DGV--PIDLP-SLQGIVILNIPSYAGGTNFWGSNK----DDDEFTAPSFD 719 (1099)
T ss_pred chHH------HHHHHHHhHHHHeeeec---CCc--ccCCc-ccceeEEEecccccCcccccCCCC----CCCcccCCCcc
Confidence 9999 88899999999888888 898 89998 999999999999999999999654 36789999999
Q ss_pred CCeEEEEEEecchhhHHHhcCCCcccccccC
Q 014315 397 DGLLEIVGFRDAWHGLVLLAPNGHGTRLAQV 427 (427)
Q Consensus 397 DG~LEVv~v~~~~h~~~~~~~~~~~~rlaQ~ 427 (427)
|+.||||.+-++.|++...+.+-+-.|||||
T Consensus 720 DriLEVVAvFGsvqMA~SRvI~LqhHRIAQC 750 (1099)
T KOG1170|consen 720 DRILEVVAVFGSVQMATSRVIRLQHHRIAQC 750 (1099)
T ss_pred cceeEEeeeehhHHHHHHHHHHhhhhhhhhc
Confidence 9999999999999999877777777999997
No 4
>PRK13057 putative lipid kinase; Reviewed
Probab=100.00 E-value=2.8e-37 Score=304.65 Aligned_cols=216 Identities=20% Similarity=0.264 Sum_probs=168.0
Q ss_pred EEEEcCccCCCChHHHHHHHHHhhccCce-EEee-ccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHH
Q 014315 85 LVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLG-EKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTAS 162 (427)
Q Consensus 85 ~vivNp~SG~~~g~~~~~~~~~~L~~~qv-~dl~-~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGDGTv~ 162 (427)
+||+||.||+++ +.+..+++.|..... +++. .+.++++.+ +.+.+. ++.+.|||+|||||||
T Consensus 1 ~~I~Np~sg~~~--~~~~~i~~~l~~~g~~~~~~~t~~~~~a~~-~~~~~~-------------~~~d~iiv~GGDGTv~ 64 (287)
T PRK13057 1 LLLVNRHARSGR--AALAAARAALEAAGLELVEPPAEDPDDLSE-VIEAYA-------------DGVDLVIVGGGDGTLN 64 (287)
T ss_pred CEEECCCCCCcc--hhHHHHHHHHHHcCCeEEEEecCCHHHHHH-HHHHHH-------------cCCCEEEEECchHHHH
Confidence 479999999876 467888888865432 3332 234555543 222211 2457899999999999
Q ss_pred HHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEeeeecCCCCCCCCC
Q 014315 163 WLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGSFDP 242 (427)
Q Consensus 163 ~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~~g~~~~ 242 (427)
+|+|+|.. ..+|||+||+||||||||+||++. +++++++.|..++.+++|+++++-
T Consensus 65 ~v~~~l~~----~~~~lgiiP~GT~Ndfar~Lg~~~--------~~~~a~~~i~~~~~~~vD~g~~~~------------ 120 (287)
T PRK13057 65 AAAPALVE----TGLPLGILPLGTANDLARTLGIPL--------DLEAAARVIATGQVRRIDLGWVNG------------ 120 (287)
T ss_pred HHHHHHhc----CCCcEEEECCCCccHHHHHcCCCC--------CHHHHHHHHHcCCeEEeeEEEECC------------
Confidence 99999975 468999999999999999999986 578889999999999999998840
Q ss_pred CCCCCCCcccccccccccccccccCCcceeccceeeeeccChhHHHHHHHhhccccCccchhcccchhhHHHHHHHhhhc
Q 014315 243 IAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGW 322 (427)
Q Consensus 243 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~r~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~~~~~ 322 (427)
+||+|++|+|+||+|++.++..+ ++..|+++|++.+++.
T Consensus 121 -------------------------------~~f~n~~g~G~da~v~~~~~~~~--------k~~~G~~aY~~~~~~~-- 159 (287)
T PRK13057 121 -------------------------------HYFFNVASLGLSAELARRLTKEL--------KRRWGTLGYAIAALRV-- 159 (287)
T ss_pred -------------------------------EEEEEEEecCccHHHHHHhhHHh--------hccCChhHHHHHHHHH--
Confidence 37999999999999999887544 3456999999999998
Q ss_pred ccccccCCCCcCcCceEEEEEEecCCcEEEEeecCceeEEEEEcCCCCcCCCCCCCCcccccccccCCCCCCCCCCeEEE
Q 014315 323 FLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLLEI 402 (427)
Q Consensus 323 ~~~~l~~~~~k~~~~~i~l~v~~~dg~~~~i~l~~~~~~ivv~N~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dDG~LEV 402 (427)
++ .++++ .+++++ ||+ ..+. +..+++|+|++|||||+.++| .++++||+|||
T Consensus 160 ----l~--~~~~~--~~~l~~---d~~--~~~~--~~~~~~v~N~~~~gg~~~~~p-------------~a~~~DG~ldv 211 (287)
T PRK13057 160 ----LR--RSRPF--TAEIEH---DGR--TERV--KTLQVAVGNGRYYGGGMTVAH-------------DATIDDGRLDL 211 (287)
T ss_pred ----Hh--hCCCe--EEEEEE---CCE--EEEE--EEEEEEEecCcccCCCcccCC-------------CCCCCCceEEE
Confidence 54 22333 456666 676 3333 567788999999999999987 58999999999
Q ss_pred EEEecch
Q 014315 403 VGFRDAW 409 (427)
Q Consensus 403 v~v~~~~ 409 (427)
++++...
T Consensus 212 ~~v~~~~ 218 (287)
T PRK13057 212 YSLEVAH 218 (287)
T ss_pred EEecCCC
Confidence 9998754
No 5
>PRK11914 diacylglycerol kinase; Reviewed
Probab=100.00 E-value=5.5e-37 Score=305.09 Aligned_cols=231 Identities=21% Similarity=0.187 Sum_probs=176.4
Q ss_pred CCCCcEEEEEcCccCCCChHHHHHHHHHhhccCce-EE-eeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEc
Q 014315 79 IPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-ID-LGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAG 156 (427)
Q Consensus 79 ~~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv-~d-l~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~G 156 (427)
..+++++||+||.||++++.+.++.+.+.|..... +. +..+.++++.+ +.+.+. ....+.|||+|
T Consensus 6 ~~~~~~~iI~NP~sG~g~~~~~~~~~~~~l~~~g~~~~~~~t~~~~~~~~-~a~~~~------------~~~~d~vvv~G 72 (306)
T PRK11914 6 HEIGKVTVLTNPLSGHGAAPHAAERAIARLHHRGVDVVEIVGTDAHDARH-LVAAAL------------AKGTDALVVVG 72 (306)
T ss_pred CCCceEEEEECCCCCCCcHHHHHHHHHHHHHHcCCeEEEEEeCCHHHHHH-HHHHHH------------hcCCCEEEEEC
Confidence 45688999999999999999999888888865321 22 22234555543 222211 12357899999
Q ss_pred CchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEeeeecCCC
Q 014315 157 GDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPK 236 (427)
Q Consensus 157 GDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~ 236 (427)
||||||+|+|++.. .++||||||+||||||||+||++.. +++++++.+.+++++++|+++|+...
T Consensus 73 GDGTi~evv~~l~~----~~~~lgiiP~GT~NdfAr~lg~~~~-------~~~~a~~~i~~g~~~~iDlg~v~~~~---- 137 (306)
T PRK11914 73 GDGVISNALQVLAG----TDIPLGIIPAGTGNDHAREFGIPTG-------DPEAAADVIVDGWTETVDLGRIQDDD---- 137 (306)
T ss_pred CchHHHHHhHHhcc----CCCcEEEEeCCCcchhHHHcCCCCC-------CHHHHHHHHHcCCceEEEEEEEecCC----
Confidence 99999999999974 4689999999999999999999851 47788889999999999999996210
Q ss_pred CCCCCCCCCCCCCcccccccccccccccccCCcceeccceeeeeccChhHHHHHHHhhccccCccchhcccchhhHHHHH
Q 014315 237 EGSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKL 316 (427)
Q Consensus 237 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~r~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~ 316 (427)
+. .++|+|++|+|+||.|+...++.|+ ..++++|++.
T Consensus 138 -------------------------------~~---~~~f~n~~~~G~~a~v~~~~~~~k~---------~~G~~aY~~~ 174 (306)
T PRK11914 138 -------------------------------GI---VKWFGTVAATGFDSLVTDRANRMRW---------PHGRMRYNLA 174 (306)
T ss_pred -------------------------------CC---cEEEEEEEeeehHHHHHHHHHhccc---------cCCchhhHHH
Confidence 00 1479999999999999988765432 3489999999
Q ss_pred HHhhhcccccccCCCCcCcCceEEEEEEecCC-cEEEEeecCceeEEEEEcCCCCcCCCCCCCCcccccccccCCCCCCC
Q 014315 317 AGTQGWFLAPLLHPSSRNIAQMAKVKIMKKQG-QWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYV 395 (427)
Q Consensus 317 g~~~~~~~~~l~~~~~k~~~~~i~l~v~~~dg-~~~~i~l~~~~~~ivv~N~~s~GGG~~~w~~~~~~~~~~~~~~~a~~ 395 (427)
+++. ++ ..+++ .++|++ || + .++ .++.+++|+|+++||||+.++| .+++
T Consensus 175 ~l~~------l~--~~~~~--~~~i~~---dg~~--~~~--~~~~~~~v~N~~~~GG~~~~~p-------------~a~~ 224 (306)
T PRK11914 175 MLAE------LS--KLRPL--PFRLVL---DGTE--EIV--TDLTLAAFGNTRSYGGGMLICP-------------NADH 224 (306)
T ss_pred HHHH------HH--hcCCC--cEEEEE---eCCe--EEE--eeEEEEEEeCcccccCCceeCC-------------CCcC
Confidence 9998 43 22333 467777 56 4 333 2677889999999999999987 5899
Q ss_pred CCCeEEEEEEecchh
Q 014315 396 DDGLLEIVGFRDAWH 410 (427)
Q Consensus 396 dDG~LEVv~v~~~~h 410 (427)
+||+|||++++..+.
T Consensus 225 ~DG~ldv~~v~~~~~ 239 (306)
T PRK11914 225 TDGLLDITMVQSASR 239 (306)
T ss_pred CCCcEEEEEEecCCH
Confidence 999999999997654
No 6
>PRK13059 putative lipid kinase; Reviewed
Probab=100.00 E-value=3.4e-37 Score=305.50 Aligned_cols=221 Identities=20% Similarity=0.196 Sum_probs=169.1
Q ss_pred CcEEEEEcCccCCCChHHHHHHHHHhhccCc----eEEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 014315 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQ----VIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (427)
Q Consensus 82 ~~v~vivNp~SG~~~g~~~~~~~~~~L~~~q----v~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GG 157 (427)
++++||+||.||++++.+.++.+++.|.... ++.++ .+.+ .+...+.. .+..+.|||+||
T Consensus 2 ~~~~~I~NP~aG~g~~~~~~~~i~~~l~~~g~~~~~~~~~--~~~~-~~~~~~~~-------------~~~~d~vi~~GG 65 (295)
T PRK13059 2 KKVKFIYNPYSGENAIISELDKVIRIHQEKGYLVVPYRIS--LEYD-LKNAFKDI-------------DESYKYILIAGG 65 (295)
T ss_pred cEEEEEECCcccchhHHHHHHHHHHHHHHCCcEEEEEEcc--Ccch-HHHHHHHh-------------hcCCCEEEEECC
Confidence 5789999999999998888888888776532 22332 2222 22121111 123578999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEeeeecCCCC
Q 014315 158 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKE 237 (427)
Q Consensus 158 DGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~~ 237 (427)
|||||+|+|+|.+. +.++||||||+||||||||+||++. ++.++++.|..++.+++|+++++-
T Consensus 66 DGTv~evv~gl~~~--~~~~~lgviP~GTgNdfAr~lgi~~--------~~~~a~~~i~~g~~~~vDlg~v~~------- 128 (295)
T PRK13059 66 DGTVDNVVNAMKKL--NIDLPIGILPVGTANDFAKFLGMPT--------DIGEACEQILKSKPKKVDLGKIND------- 128 (295)
T ss_pred ccHHHHHHHHHHhc--CCCCcEEEECCCCHhHHHHHhCCCC--------CHHHHHHHHHhCCcEEeeEEEECC-------
Confidence 99999999999853 2468999999999999999999986 588899999999999999999851
Q ss_pred CCCCCCCCCCCCcccccccccccccccccCCcceeccceeeeeccChhHHHHHHHhhccccCccchhcccchhhHHHHHH
Q 014315 238 GSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLA 317 (427)
Q Consensus 238 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~r~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g 317 (427)
+||+|++|+|+||+|++.++... ++.+|+++|++.+
T Consensus 129 ------------------------------------~~f~n~~~~G~~a~v~~~~~~~~--------k~~~G~~aY~~~~ 164 (295)
T PRK13059 129 ------------------------------------KYFINVASTGLFTDVSQKTDVNL--------KNTIGKLAYYLKG 164 (295)
T ss_pred ------------------------------------EEEEEEEeeeechhhhhhccHHH--------hhCcchHHHHHHH
Confidence 37999999999999999886432 3456999999999
Q ss_pred HhhhcccccccCCCCcCcCceEEEEEEecCCcEEEEeecCceeEEEEEcCCCCcCCCCCCCCcccccccccCCCCCCCCC
Q 014315 318 GTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDD 397 (427)
Q Consensus 318 ~~~~~~~~~l~~~~~k~~~~~i~l~v~~~dg~~~~i~l~~~~~~ivv~N~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dD 397 (427)
++. ++ .++++ .++|++ ||+ .++. +..+++|+|++|+| |+.++| .++++|
T Consensus 165 ~~~------l~--~~~~~--~~~i~~---d~~--~~~~--~~~~~~v~N~~~~G-g~~~~p-------------~a~~~D 213 (295)
T PRK13059 165 LEE------LP--NFRKL--KVKVTS---EEV--NFDG--DMYLMLVFNGQTAG-NFNLAY-------------KAEVDD 213 (295)
T ss_pred HHH------Hh--cCCCe--eEEEEE---CCE--EEEe--eEEEEEEEcCcccc-CcccCC-------------cccCCC
Confidence 998 43 22332 456666 665 4442 56788899999887 567776 589999
Q ss_pred CeEEEEEEecchh
Q 014315 398 GLLEIVGFRDAWH 410 (427)
Q Consensus 398 G~LEVv~v~~~~h 410 (427)
|+|||+++++...
T Consensus 214 G~Ldv~i~~~~~~ 226 (295)
T PRK13059 214 GLLDVIIIKACPI 226 (295)
T ss_pred CeEEEEEEcCCCH
Confidence 9999999998654
No 7
>TIGR03702 lip_kinase_YegS lipid kinase YegS. Members of this protein family are designated YegS, an apparent lipid kinase family in the Proteobacteria. Bakali, et al. report phosphatidylglycerol kinase activity for the member from Escherichia coli, but refrain from calling that activity synonymous with its biological role. Note that a broader, subfamily-type model (TIGR00147), includes this family but also multiple paralogs in some species and varied functions.
Probab=100.00 E-value=1.9e-36 Score=299.78 Aligned_cols=222 Identities=16% Similarity=0.153 Sum_probs=163.4
Q ss_pred cEEEEEcCccCCCChHHHHHHHHHhhccCce-EEee-ccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchH
Q 014315 83 PVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLG-EKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGT 160 (427)
Q Consensus 83 ~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv-~dl~-~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGDGT 160 (427)
++++|+||+||..+ .+..+.+.|....+ +++. .+.++++.+ +.+.+. .++.+.|||+|||||
T Consensus 1 ~~~~I~N~~~~~~~---~~~~~~~~l~~~g~~~~v~~t~~~~~a~~-~a~~~~------------~~~~d~vv~~GGDGT 64 (293)
T TIGR03702 1 KALLILNGKQADNE---DVREAVGDLRDEGIQLHVRVTWEKGDAQR-YVAEAL------------ALGVSTVIAGGGDGT 64 (293)
T ss_pred CEEEEEeCCccchh---HHHHHHHHHHHCCCeEEEEEecCCCCHHH-HHHHHH------------HcCCCEEEEEcCChH
Confidence 47899999987332 34444555554322 2322 234566544 333221 123578999999999
Q ss_pred HHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEeeeecCCCCCCC
Q 014315 161 ASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGSF 240 (427)
Q Consensus 161 v~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~~g~~ 240 (427)
||+|+|+|.+......+|||+||+||||||||+||++. +++++++.+..+.++++|+++++-
T Consensus 65 i~ev~ngl~~~~~~~~~~lgiiP~GTgNdfAr~l~ip~--------~~~~a~~~i~~g~~~~iDlg~v~~---------- 126 (293)
T TIGR03702 65 LREVATALAQIRDDAAPALGLLPLGTANDFATAAGIPL--------EPAKALKLALNGAAQPIDLARVNG---------- 126 (293)
T ss_pred HHHHHHHHHhhCCCCCCcEEEEcCCchhHHHHhcCCCC--------CHHHHHHHHHhCCceeeeEEEECC----------
Confidence 99999999753222357899999999999999999986 578889999999999999998751
Q ss_pred CCCCCCCCCcccccccccccccccccCCcceeccceeeeeccChhHHHHHHHhhccccCccchhcccchhhHHHHHHHhh
Q 014315 241 DPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQ 320 (427)
Q Consensus 241 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~r~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~~~ 320 (427)
.+||+|.+|+|+||+|+..++... ++..|+++|++.+++.
T Consensus 127 --------------------------------~~~f~n~~~~G~da~v~~~~~~~~--------k~~~G~~aY~~~~l~~ 166 (293)
T TIGR03702 127 --------------------------------KHYFLNMATGGFGTRVTTETSEKL--------KKALGGAAYLITGLTR 166 (293)
T ss_pred --------------------------------ccEEEEEeecccchHhhhhhhHHH--------HhccchHHHHHHHHHH
Confidence 037999999999999999987643 3456999999999998
Q ss_pred hcccccccCCCCcCcCceEEEEEEecCCcEEEEeecCceeEEEEEcCCCCcCCCCCCCCcccccccccCCCCCCCCCCeE
Q 014315 321 GWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLL 400 (427)
Q Consensus 321 ~~~~~~l~~~~~k~~~~~i~l~v~~~dg~~~~i~l~~~~~~ivv~N~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dDG~L 400 (427)
++ +.+++ .++++. |+. ++. .+..+++|+|++|||||+.++| .++++||+|
T Consensus 167 ------l~--~~~~~--~~~i~~---~~~--~~~--~~~~~~~v~N~~~~GGg~~i~P-------------~A~~~DG~L 216 (293)
T TIGR03702 167 ------FS--ELTAA--SCEFRG---PDF--HWE--GDFLALGIGNGRQAGGGQVLCP-------------DALINDGLL 216 (293)
T ss_pred ------Hh--hCCCe--EEEEEE---CCE--EEE--eeEEEEEEECCCcCCCCceeCC-------------CCccCCceE
Confidence 43 22332 334444 554 332 2567888999999999999987 589999999
Q ss_pred EEEEEecc
Q 014315 401 EIVGFRDA 408 (427)
Q Consensus 401 EVv~v~~~ 408 (427)
||++++..
T Consensus 217 dv~~v~~~ 224 (293)
T TIGR03702 217 DVRILPAP 224 (293)
T ss_pred EEEEeCCH
Confidence 99999883
No 8
>PRK13055 putative lipid kinase; Reviewed
Probab=100.00 E-value=3.5e-36 Score=303.21 Aligned_cols=227 Identities=16% Similarity=0.152 Sum_probs=174.1
Q ss_pred CCcEEEEEcCccCCCChHHHHHHHHHhhccCce-EEe--eccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 014315 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDL--GEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (427)
Q Consensus 81 ~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv-~dl--~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GG 157 (427)
+++++||+||+||++++.+.|..+++.|....+ +++ +...+.++.+ +.+.+. .+..+.|||+||
T Consensus 2 ~~r~~iI~NP~sG~~~~~~~~~~i~~~l~~~g~~~~i~~t~~~~~~a~~-~~~~~~------------~~~~d~vvv~GG 68 (334)
T PRK13055 2 QKRARLIYNPTSGQEIMKKNVADILDILEQAGYETSAFQTTPEPNSAKN-EAKRAA------------EAGFDLIIAAGG 68 (334)
T ss_pred CceEEEEECCCCCchhHHHHHHHHHHHHHHcCCeEEEEEeecCCccHHH-HHHHHh------------hcCCCEEEEECC
Confidence 367999999999999999999999998875432 332 2223445433 222221 123578999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEeeeecCCCC
Q 014315 158 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKE 237 (427)
Q Consensus 158 DGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~~ 237 (427)
|||||+|+|+|... +..+||||||+||||||||+||++.+ ++.++++.+..++++++|+++++-
T Consensus 69 DGTl~evvngl~~~--~~~~~LgiiP~GTgNdfAr~Lgi~~~-------~~~~a~~~l~~g~~~~vD~g~v~~------- 132 (334)
T PRK13055 69 DGTINEVVNGIAPL--EKRPKMAIIPAGTTNDYARALKIPRD-------NPVEAAKVILKNQTIKMDIGRANE------- 132 (334)
T ss_pred CCHHHHHHHHHhhc--CCCCcEEEECCCchhHHHHHcCCCCc-------CHHHHHHHHHcCCcEEeeEEEECC-------
Confidence 99999999999853 24689999999999999999999851 377888999999999999998840
Q ss_pred CCCCCCCCCCCCcccccccccccccccccCCcceeccceeeeeccChhHHHHHHHhhccccCccchhcccchhhHHHHHH
Q 014315 238 GSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLA 317 (427)
Q Consensus 238 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~r~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g 317 (427)
.+||+|.+|+|+||+|+...+... ++.+|+++|+..+
T Consensus 133 -----------------------------------~~~F~n~ag~G~da~v~~~~~~~~--------k~~~G~laY~~~~ 169 (334)
T PRK13055 133 -----------------------------------DKYFINIAAGGSLTELTYSVPSQL--------KSMFGYLAYLAKG 169 (334)
T ss_pred -----------------------------------CcEEEEEehhccchHHHHhcCHHH--------HhhccHHHHHHHH
Confidence 037999999999999998877543 2356999999999
Q ss_pred HhhhcccccccCCCCcCcCceEEEEEEecCCcEEEEeecCceeEEEEEcCCCCcCCCCCCCCcccccccccCCCCCCCCC
Q 014315 318 GTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDD 397 (427)
Q Consensus 318 ~~~~~~~~~l~~~~~k~~~~~i~l~v~~~dg~~~~i~l~~~~~~ivv~N~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dD 397 (427)
++. ++ .++++ .++|++ ||+ ..+. +..+++++|+++||||+.++| .++++|
T Consensus 170 ~~~------l~--~~~~~--~~~i~~---d~~--~~~~--~~~~~~v~n~~~~Gg~~~~~p-------------~a~~~D 219 (334)
T PRK13055 170 AEL------LP--RVSPV--PVRITY---DEG--VFEG--KISMFFLALTNSVGGFEQIVP-------------DAKLDD 219 (334)
T ss_pred HHH------HH--hcCCe--eEEEEE---CCE--EEEE--EEEEEEEEcCcccCCccccCC-------------CCcCCC
Confidence 998 54 22332 456666 665 3332 567788999999999999887 588999
Q ss_pred CeEEEEEEecch
Q 014315 398 GLLEIVGFRDAW 409 (427)
Q Consensus 398 G~LEVv~v~~~~ 409 (427)
|+|||++++...
T Consensus 220 G~ldv~i~~~~~ 231 (334)
T PRK13055 220 GKFTLIIVKTAN 231 (334)
T ss_pred ceEEEEEEcCCC
Confidence 999999998853
No 9
>PRK13337 putative lipid kinase; Reviewed
Probab=100.00 E-value=4.4e-36 Score=298.56 Aligned_cols=225 Identities=17% Similarity=0.150 Sum_probs=173.3
Q ss_pred CcEEEEEcCccCCCChHHHHHHHHHhhccCce-EEeec-cCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 014315 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGE-KAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 159 (427)
Q Consensus 82 ~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv-~dl~~-~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGDG 159 (427)
++++||+||+||++++.+.|..+.+.|....+ +++.. +.++++.+ +.+.+. .+..+.|||+||||
T Consensus 2 ~r~~~I~Np~aG~~~~~~~~~~~~~~l~~~~~~~~~~~t~~~~~a~~-~a~~~~------------~~~~d~vvv~GGDG 68 (304)
T PRK13337 2 KRARIIYNPTSGRELFKKNLPDVLQKLEQAGYETSAHATTGPGDATL-AAERAV------------ERKFDLVIAAGGDG 68 (304)
T ss_pred ceEEEEECCcccchhHHHHHHHHHHHHHHcCCEEEEEEecCCCCHHH-HHHHHH------------hcCCCEEEEEcCCC
Confidence 57899999999998888888887777765432 33322 34556543 323221 12357899999999
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEeeeecCCCCCC
Q 014315 160 TASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGS 239 (427)
Q Consensus 160 Tv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~~g~ 239 (427)
|||+|+|+|... +..+||||||.||||||||+||++. +++++++.+..+.++++|+++++-
T Consensus 69 Tl~~vv~gl~~~--~~~~~lgiiP~GT~NdfAr~lgi~~--------~~~~a~~~i~~g~~~~vDlg~vn~--------- 129 (304)
T PRK13337 69 TLNEVVNGIAEK--ENRPKLGIIPVGTTNDFARALHVPR--------DIEKAADVIIEGHTVPVDIGKANN--------- 129 (304)
T ss_pred HHHHHHHHHhhC--CCCCcEEEECCcCHhHHHHHcCCCC--------CHHHHHHHHHcCCeEEEEEEEECC---------
Confidence 999999999753 2468999999999999999999986 578889999999999999998851
Q ss_pred CCCCCCCCCCcccccccccccccccccCCcceeccceeeeeccChhHHHHHHHhhccccCccchhcccchhhHHHHHHHh
Q 014315 240 FDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGT 319 (427)
Q Consensus 240 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~r~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~~ 319 (427)
++|+|.+|+|+||+|++.++... ++..++++|++.+++
T Consensus 130 ----------------------------------~~fln~~g~G~~a~v~~~~~~~~--------k~~~G~~aY~~~~~~ 167 (304)
T PRK13337 130 ----------------------------------RYFINIAGGGRLTELTYEVPSKL--------KTMLGQLAYYLKGIE 167 (304)
T ss_pred ----------------------------------EEEEeeehhhHHHHHHHhcCHHH--------hcCcccHHHHHHHHH
Confidence 37999999999999998876432 345689999999998
Q ss_pred hhcccccccCCCCcCcCceEEEEEEecCCcEEEEeecCceeEEEEEcCCCCcCCCCCCCCcccccccccCCCCCCCCCCe
Q 014315 320 QGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGL 399 (427)
Q Consensus 320 ~~~~~~~l~~~~~k~~~~~i~l~v~~~dg~~~~i~l~~~~~~ivv~N~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dDG~ 399 (427)
. ++ ..+++ .+++++ ||+ .++. +...++++|+++||||+.++| .+.++||+
T Consensus 168 ~------l~--~~~~~--~~~i~~---d~~--~~~~--~~~~~~v~n~~~~gg~~~~~p-------------~a~~~DG~ 217 (304)
T PRK13337 168 M------LP--SLKAT--DVRIEY---DGK--LFQG--EIMLFLLGLTNSVGGFEKLAP-------------DASLDDGY 217 (304)
T ss_pred H------Hh--hCCCc--eEEEEE---CCe--EEEe--EEEEEEEEcCcccCCccccCC-------------cccCCCCe
Confidence 7 43 22333 356666 776 3332 567889999999999999887 57899999
Q ss_pred EEEEEEecchh
Q 014315 400 LEIVGFRDAWH 410 (427)
Q Consensus 400 LEVv~v~~~~h 410 (427)
|||++++....
T Consensus 218 ldv~iv~~~~~ 228 (304)
T PRK13337 218 FDLIIVKKANL 228 (304)
T ss_pred EEEEEEcCCCH
Confidence 99999988643
No 10
>PRK13054 lipid kinase; Reviewed
Probab=100.00 E-value=8.3e-36 Score=296.09 Aligned_cols=224 Identities=18% Similarity=0.153 Sum_probs=167.5
Q ss_pred CCCcEEEEEcCccCCCChHHHHHHHHHhhccCce-EEeec-cCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 014315 80 PSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGE-KAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (427)
Q Consensus 80 ~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv-~dl~~-~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GG 157 (427)
+++.++||+||+|++ .+.+..+.+.|....+ +++.. +.++++.+ +.+... .++.+.|||+||
T Consensus 2 ~~~~~~~i~N~~~~~---~~~~~~~~~~l~~~g~~~~v~~t~~~~~a~~-~a~~~~------------~~~~d~vvv~GG 65 (300)
T PRK13054 2 TFPKSLLILNGKSAG---NEELREAVGLLREEGHTLHVRVTWEKGDAAR-YVEEAL------------ALGVATVIAGGG 65 (300)
T ss_pred CCceEEEEECCCccc---hHHHHHHHHHHHHcCCEEEEEEecCCCcHHH-HHHHHH------------HcCCCEEEEECC
Confidence 567899999999763 3445555555554322 33322 34566543 323221 123578999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEeeeecCCCC
Q 014315 158 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKE 237 (427)
Q Consensus 158 DGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~~ 237 (427)
|||||+|+|+|.+...+.++||||||.||||||||+||++. +++++++.|.++.++++|+++++-
T Consensus 66 DGTl~evv~~l~~~~~~~~~~lgiiP~GTgNdfar~lgi~~--------~~~~a~~~i~~g~~~~iDlg~v~~------- 130 (300)
T PRK13054 66 DGTINEVATALAQLEGDARPALGILPLGTANDFATAAGIPL--------EPDKALKLAIEGRAQPIDLARVND------- 130 (300)
T ss_pred ccHHHHHHHHHHhhccCCCCcEEEEeCCcHhHHHHhcCCCC--------CHHHHHHHHHhCCceEEEEEEEcC-------
Confidence 99999999999854223468999999999999999999986 578899999999999999998851
Q ss_pred CCCCCCCCCCCCcccccccccccccccccCCcceeccceeeeeccChhHHHHHHHhhccccCccchhcccchhhHHHHHH
Q 014315 238 GSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLA 317 (427)
Q Consensus 238 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~r~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g 317 (427)
++||+|.+|+|+||+|++..+... ++.+|+++|+..+
T Consensus 131 -----------------------------------~~~f~n~~~~G~~a~v~~~~~~~~--------k~~~G~~~Y~~~~ 167 (300)
T PRK13054 131 -----------------------------------RTYFINMATGGFGTRVTTETPEKL--------KAALGGVAYLIHG 167 (300)
T ss_pred -----------------------------------ceEEEEEeecchhHHHHHhhHHHH--------HhccchHHHHHHH
Confidence 027999999999999998886532 3456999999999
Q ss_pred HhhhcccccccCCCCcCcCceEEEEEEecCCcEEEEeecCceeEEEEEcCCCCcCCCCCCCCcccccccccCCCCCCCCC
Q 014315 318 GTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDD 397 (427)
Q Consensus 318 ~~~~~~~~~l~~~~~k~~~~~i~l~v~~~dg~~~~i~l~~~~~~ivv~N~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dD 397 (427)
++. ++ .++++ .++|+. |++ .++. +...++|+|.++||||+.++| +++++|
T Consensus 168 l~~------l~--~~~~~--~~~i~~---d~~--~~~~--~~~~~~v~N~~~~ggg~~~~p-------------~a~~~D 217 (300)
T PRK13054 168 LMR------MD--TLKPD--RCEIRG---PDF--HWQG--DALVIGIGNGRQAGGGQQLCP-------------EALIND 217 (300)
T ss_pred HHH------Hh--hCCCe--EEEEEe---CCc--EEEe--eEEEEEEECCCcCCCCcccCC-------------CCcCCC
Confidence 998 44 23333 345555 665 3332 678899999999999999887 588999
Q ss_pred CeEEEEEEec
Q 014315 398 GLLEIVGFRD 407 (427)
Q Consensus 398 G~LEVv~v~~ 407 (427)
|+|||++++.
T Consensus 218 G~ldv~~~~~ 227 (300)
T PRK13054 218 GLLDLRILPA 227 (300)
T ss_pred CeEEEEEECC
Confidence 9999999988
No 11
>PRK00861 putative lipid kinase; Reviewed
Probab=100.00 E-value=3.5e-35 Score=291.37 Aligned_cols=224 Identities=17% Similarity=0.147 Sum_probs=168.0
Q ss_pred CCcEEEEEcCccCCCChHHHHHHHHHhhccCceEEeec-cCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 014315 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGE-KAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 159 (427)
Q Consensus 81 ~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv~dl~~-~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGDG 159 (427)
+++++||+||.||++++.+.|+.++..|.+..-+++.. +.++++.+ +.+... .++.+.||++||||
T Consensus 2 ~~~~~iI~NP~sG~~~~~~~~~~i~~~l~~~~~~~~~~t~~~~~a~~-~a~~~~------------~~~~d~vv~~GGDG 68 (300)
T PRK00861 2 TRSACLIFNPVAGQGNPEVDLALIRAILEPEMDLDIYLTTPEIGADQ-LAQEAI------------ERGAELIIASGGDG 68 (300)
T ss_pred CceEEEEECCCCCCCchhhhHHHHHHHHHhcCceEEEEccCCCCHHH-HHHHHH------------hcCCCEEEEECChH
Confidence 36799999999999998888888888886531133322 34555543 222211 12357899999999
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEeeeecCCCCCC
Q 014315 160 TASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGS 239 (427)
Q Consensus 160 Tv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~~g~ 239 (427)
|||+|+|++.. ..+|||+||+||||||||+||++. +++++++.|.++.++++|+++++-
T Consensus 69 Tl~evv~~l~~----~~~~lgviP~GTgNdfAr~lgi~~--------~~~~a~~~i~~g~~~~iDlg~vn~--------- 127 (300)
T PRK00861 69 TLSAVAGALIG----TDIPLGIIPRGTANAFAAALGIPD--------TIEEACRTILQGKTRRVDVAYCNG--------- 127 (300)
T ss_pred HHHHHHHHHhc----CCCcEEEEcCCchhHHHHHcCCCC--------CHHHHHHHHHcCCcEEeeEEEECC---------
Confidence 99999999975 468999999999999999999986 578889999999999999998851
Q ss_pred CCCCCCCCCCcccccccccccccccccCCcceeccceeeeeccChhHHHHHHHhhccccCccchhcccchhhHHHHHHHh
Q 014315 240 FDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGT 319 (427)
Q Consensus 240 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~r~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~~ 319 (427)
+||+|.+|+|+||+|++..++.. ++.+++++|++.+++
T Consensus 128 ----------------------------------~~fin~a~~G~~a~v~~~~~~~~--------k~~~G~~aY~~~~l~ 165 (300)
T PRK00861 128 ----------------------------------QPMILLAGIGFEAETVEEADREA--------KNRFGILAYILSGLQ 165 (300)
T ss_pred ----------------------------------EEEEEEEeccHHHHHHHHhhHHH--------HhcccHHHHHHHHHH
Confidence 37999999999999999886543 335689999999999
Q ss_pred hhcccccccCCCCcCcCceEEEEEEecCCcEEEEeecCceeEEEEEcCCCCcCCCCC-CCCcccccccccCCCCCCCCCC
Q 014315 320 QGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDP-WGKPFRKKLRERGLTPPYVDDG 398 (427)
Q Consensus 320 ~~~~~~~l~~~~~k~~~~~i~l~v~~~dg~~~~i~l~~~~~~ivv~N~~s~GGG~~~-w~~~~~~~~~~~~~~~a~~dDG 398 (427)
. ++ .++++ .++|++ ||+ .++. +..+++++|++++++.+-. .| .+.++||
T Consensus 166 ~------l~--~~~~~--~~~i~~---dg~--~~~~--~~~~i~v~N~~~~~~~~~~g~p-------------~a~~~DG 215 (300)
T PRK00861 166 Q------LR--ELESF--EVEIET---EDQ--IITT--NAVAVTVANAAPPTSVLAQGPG-------------AVIPDDG 215 (300)
T ss_pred H------hc--cCCCe--eEEEEE---CCe--EEEE--EEEEEEEECCCCcccccccCCC-------------CCCCCCc
Confidence 8 54 23343 456666 676 3432 5678999999855322210 12 4889999
Q ss_pred eEEEEEEecchh
Q 014315 399 LLEIVGFRDAWH 410 (427)
Q Consensus 399 ~LEVv~v~~~~h 410 (427)
+|||++++..+.
T Consensus 216 ~ldv~iv~~~~~ 227 (300)
T PRK00861 216 LLDVTIVAPKNL 227 (300)
T ss_pred eEEEEEEcCCCH
Confidence 999999987654
No 12
>TIGR00147 lipid kinase, YegS/Rv2252/BmrU family. The E. coli member of this family, YegS has been purified and shown to have phosphatidylglycerol kinase activity. The member from M. tuberculosis, Rv2252, has diacylglycerol kinase activity. BmrU from B. subtilis is in an operon with multidrug efflux transporter Bmr, but is uncharacterized.
Probab=100.00 E-value=4.5e-35 Score=289.29 Aligned_cols=225 Identities=17% Similarity=0.182 Sum_probs=171.6
Q ss_pred CcEEEEEcCccCCCChHHHHHHHHHhhccCce-EEeec-cCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 014315 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGE-KAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 159 (427)
Q Consensus 82 ~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv-~dl~~-~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGDG 159 (427)
++++||+||.||++.+.+.++.+++.|....+ +.+.. +.++++.+ ..+.. . .++.+.||++||||
T Consensus 2 ~~~~ii~Np~sg~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~~~~~~-~~~~~---~---------~~~~d~ivv~GGDG 68 (293)
T TIGR00147 2 AEAPAILNPTAGKSNDNKPLREVIMLLREEGMEIHVRVTWEKGDAAR-YVEEA---R---------KFGVDTVIAGGGDG 68 (293)
T ss_pred ceEEEEECCCccchhhHHHHHHHHHHHHHCCCEEEEEEecCcccHHH-HHHHH---H---------hcCCCEEEEECCCC
Confidence 67999999999999888999999888765432 33322 23334322 11111 0 02357899999999
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEeeeecCCCCCC
Q 014315 160 TASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGS 239 (427)
Q Consensus 160 Tv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~~g~ 239 (427)
|+++|+|++... ...|+||+||.||+|||||+||++. ++.++++.+.+++.+++|+++++-
T Consensus 69 Tl~~v~~~l~~~--~~~~~lgiiP~Gt~N~~a~~l~i~~--------~~~~~~~~l~~~~~~~~Dlg~v~~--------- 129 (293)
T TIGR00147 69 TINEVVNALIQL--DDIPALGILPLGTANDFARSLGIPE--------DLDKAAKLVIAGDARAIDMGQVNK--------- 129 (293)
T ss_pred hHHHHHHHHhcC--CCCCcEEEEcCcCHHHHHHHcCCCC--------CHHHHHHHHHcCCceEEEEEEECC---------
Confidence 999999999753 2357899999999999999999985 577889999999999999998751
Q ss_pred CCCCCCCCCCcccccccccccccccccCCcceeccc-eeeeeccChhHHHHHHHhhccccCccchhcccchhhHHHHHHH
Q 014315 240 FDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGG-FWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAG 318 (427)
Q Consensus 240 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~r~-F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~ 318 (427)
++ |+|++|+|+||++++.++... ++..++++|++.++
T Consensus 130 ----------------------------------~~~fln~~g~G~~a~v~~~~~~~~--------k~~~g~~~Y~~~~l 167 (293)
T TIGR00147 130 ----------------------------------QYCFINMAGGGFGTEITTETPEKL--------KAALGSLSYILSGL 167 (293)
T ss_pred ----------------------------------eEEEEEEEeechhhHhHhhCCHHH--------HhccchHHHHHHHH
Confidence 37 999999999999998876432 33568999999999
Q ss_pred hhhcccccccCCCCcCcCceEEEEEEecCCcEEEEeecCceeEEEEEcCCCCcCCCCCCCCcccccccccCCCCCCCCCC
Q 014315 319 TQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDG 398 (427)
Q Consensus 319 ~~~~~~~~l~~~~~k~~~~~i~l~v~~~dg~~~~i~l~~~~~~ivv~N~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dDG 398 (427)
+. +. +++++ .++|++ ||+ .++. +...++++|+++||||+.++| .++++||
T Consensus 168 ~~------l~--~~~~~--~~~i~~---d~~--~~~~--~~~~~~v~n~~~~gg~~~~~p-------------~a~~~DG 217 (293)
T TIGR00147 168 MR------MD--TLQPF--RCEIRG---EGE--HWQG--EAVVFLVGNGRQAGGGQKLAP-------------DASINDG 217 (293)
T ss_pred HH------Hh--hCCCe--eEEEEE---CCe--EEEe--eEEEEEEeCCcccCCCcccCC-------------ccccCCC
Confidence 88 43 23333 456666 675 4443 456778889999999999887 4789999
Q ss_pred eEEEEEEecchh
Q 014315 399 LLEIVGFRDAWH 410 (427)
Q Consensus 399 ~LEVv~v~~~~h 410 (427)
+|||+++++.+.
T Consensus 218 ~l~v~~v~~~~~ 229 (293)
T TIGR00147 218 LLDLRIFTNDNL 229 (293)
T ss_pred eeEEEEEcCCCH
Confidence 999999987643
No 13
>COG1597 LCB5 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]
Probab=100.00 E-value=6.5e-34 Score=282.72 Aligned_cols=225 Identities=23% Similarity=0.306 Sum_probs=176.1
Q ss_pred CCcEEEEEcCccCCCChHHHHHHHHHhhccCc--eEEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 014315 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--VIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 158 (427)
Q Consensus 81 ~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~q--v~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGD 158 (427)
++++.+|+||.||++++.+.|+.+++.|.... +.....+.++++.+ +.+.+. ....+.||++|||
T Consensus 2 ~~~~~~i~Np~sG~~~~~~~~~~~~~~l~~~g~~~~~~~t~~~g~a~~-~a~~a~------------~~~~D~via~GGD 68 (301)
T COG1597 2 MKKALLIYNPTSGKGKAKKLLREVEELLEEAGHELSVRVTEEAGDAIE-IAREAA------------VEGYDTVIAAGGD 68 (301)
T ss_pred CceEEEEEcccccccchhhHHHHHHHHHHhcCCeEEEEEeecCccHHH-HHHHHH------------hcCCCEEEEecCc
Confidence 46799999999999999999999999887532 21111123356654 223221 1246899999999
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEeeeecCCCCC
Q 014315 159 GTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEG 238 (427)
Q Consensus 159 GTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~~g 238 (427)
||||+|+|+|.+.. .++|||||+||+|||||+||||. .++.++++.+.+++++.+|+++++
T Consensus 69 GTv~evingl~~~~---~~~LgilP~GT~NdfAr~Lgip~-------~~~~~Al~~i~~g~~~~vDlg~~~--------- 129 (301)
T COG1597 69 GTVNEVANGLAGTD---DPPLGILPGGTANDFARALGIPL-------DDIEAALELIKSGETRKVDLGQVN--------- 129 (301)
T ss_pred chHHHHHHHHhcCC---CCceEEecCCchHHHHHHcCCCc-------hhHHHHHHHHHcCCeEEEeehhcC---------
Confidence 99999999999752 23399999999999999999996 148999999999999999998653
Q ss_pred CCCCCCCCCCCcccccccccccccccccCCcceeccceeeeeccChhHHHHHHHhhccccCccchhcccchhhHHHHHHH
Q 014315 239 SFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAG 318 (427)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~r~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~ 318 (427)
+ ++||+|.+|+|+||+++++.+..|+ +..++++|++.++
T Consensus 130 -----------------------~----------~~~fin~a~~G~~a~~~~~~~~~~k--------~~~g~~~y~~~~~ 168 (301)
T COG1597 130 -----------------------G----------RRYFINNAGIGFDAEVVAAVEEERK--------KGFGRLAYALAGL 168 (301)
T ss_pred -----------------------C----------cceEEEEeecchhHHHHHhhcHHHH--------hccchHHHHHHHH
Confidence 0 0279999999999999999998774 3468999999999
Q ss_pred hhhcccccccCCCCcCcCceEEEEEEecCCcEEEEeecCceeEEEEEcCCCCcCCCCCCCCcccccccccCCCCCCCCCC
Q 014315 319 TQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDG 398 (427)
Q Consensus 319 ~~~~~~~~l~~~~~k~~~~~i~l~v~~~dg~~~~i~l~~~~~~ivv~N~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dDG 398 (427)
+. +. ..+++ .++|++ |++ ..+. ....+++.|.+++|||..+.| +++++||
T Consensus 169 ~~------l~--~~~~~--~~~i~~---d~~--~~~~--~~~~~~~~~~~~~gg~~~~~p-------------~a~~~dG 218 (301)
T COG1597 169 AV------LA--RLKPF--RIEIEY---DGK--TFEG--EALALLVFNGNSYGGGMKLAP-------------DASLDDG 218 (301)
T ss_pred Hh------cc--ccCCC--cEEEEE---cCc--EEEE--EEEEEEEecCcccccccccCC-------------cCCCCCc
Confidence 87 42 33343 467888 555 3332 467888888889999999887 5899999
Q ss_pred eEEEEEEecc
Q 014315 399 LLEIVGFRDA 408 (427)
Q Consensus 399 ~LEVv~v~~~ 408 (427)
+|++++++..
T Consensus 219 ~l~~~i~~~~ 228 (301)
T COG1597 219 LLDVYILKPQ 228 (301)
T ss_pred eEEEEEEccc
Confidence 9999999985
No 14
>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase
Probab=100.00 E-value=2.3e-33 Score=294.68 Aligned_cols=237 Identities=16% Similarity=0.197 Sum_probs=168.3
Q ss_pred CCCcEEEEEcCccCCCChHHHHH-HHHHhhccCce-EEee-ccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEc
Q 014315 80 PSCPVLVFINSKSGGQLGGKLLL-TYRSLLNENQV-IDLG-EKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAG 156 (427)
Q Consensus 80 ~~~~v~vivNp~SG~~~g~~~~~-~~~~~L~~~qv-~dl~-~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~G 156 (427)
.+++++||+||.||++++.++|. .++.+|....+ +++. .+.++++.+ +.+.+. ....+.||++|
T Consensus 110 ~~kr~lvIvNP~SGkg~a~k~~~~~v~~~L~~~gi~~~v~~T~~~ghA~~-la~~~~------------~~~~D~VV~vG 176 (481)
T PLN02958 110 RPKRLLVFVNPFGGKKSASKIFFDVVKPLLEDADIQLTIQETKYQLHAKE-VVRTMD------------LSKYDGIVCVS 176 (481)
T ss_pred CCcEEEEEEcCCCCCcchhHHHHHHHHHHHHHcCCeEEEEeccCccHHHH-HHHHhh------------hcCCCEEEEEc
Confidence 45789999999999999988875 68878875432 3333 245677654 333221 12457899999
Q ss_pred CchHHHHHHHHHhcCCC---CCCCCEEEEeCCCCcchhhhc----CCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEe
Q 014315 157 GDGTASWLLGVVSDLKL---PHSPPVATVPLGTGNNIPFSF----GWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 229 (427)
Q Consensus 157 GDGTv~~Vln~l~~~~~---~~~~plgiIPlGTGNDfAR~L----Gw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~ 229 (427)
||||||||+|+|..... ..++||||||+||||||||+| |++. ++.+++..|..+..+++|+++|+
T Consensus 177 GDGTlnEVvNGL~~~~~~~~~~~~pLGiIPaGTgNdfArsL~~~~gip~--------~~~~A~~~I~~g~~~~vDlg~v~ 248 (481)
T PLN02958 177 GDGILVEVVNGLLEREDWKTAIKLPIGMVPAGTGNGMAKSLLDSVGEPC--------SATNAVLAIIRGHKCSLDVATIL 248 (481)
T ss_pred CCCHHHHHHHHHhhCccccccccCceEEecCcCcchhhhhhccccCCCc--------CHHHHHHHHHcCCceEEeEEEEE
Confidence 99999999999975321 136899999999999999999 8875 57888889999999999999985
Q ss_pred eeecCCCCCCCCCCCCCCCCcccccccccccccccccCCcceeccceeeeeccChhHHHHHHHhhccccCccchhcccch
Q 014315 230 MRMKAPKEGSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVN 309 (427)
Q Consensus 230 ~~~~~~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~r~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~n 309 (427)
.. + .. .+|+|.+|+||||+|....++ +|++|
T Consensus 249 ~~------------------------------~-------~~--~f~vn~~g~GfdAdV~~~se~----------kr~lG 279 (481)
T PLN02958 249 QG------------------------------E-------TK--FFSVLMLAWGLVADIDIESEK----------YRWMG 279 (481)
T ss_pred cC------------------------------C-------ce--EEEEEeeeeehhhhhhccccc----------ccccc
Confidence 10 0 01 135899999999999654321 44579
Q ss_pred hhHHHHHHHhhhcccccccCCCCcCcCceEEEEEE---------------ec-C----------------------CcEE
Q 014315 310 QSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKVKIM---------------KK-Q----------------------GQWE 351 (427)
Q Consensus 310 kl~Y~~~g~~~~~~~~~l~~~~~k~~~~~i~l~v~---------------~~-d----------------------g~~~ 351 (427)
+++|.+++++. +++ .+.+ ..+|++. .. + .+|+
T Consensus 280 ~lrY~~~~l~~------l~~--~r~y--~~~I~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 349 (481)
T PLN02958 280 SARLDFYGLQR------ILC--LRQY--NGRISFVPAPGFEAYGEPTSYNGESTSKEESGKDKQHGYQGPDVKLENLDWR 349 (481)
T ss_pred hHHHHHHHHHH------HHh--cCCc--ceEEEEEeccccccccccccccccccccccccccccccccCCccccCCccce
Confidence 99999999998 331 2222 2233321 00 0 1122
Q ss_pred EEeecCceeEEEEEcCCCCcCCCCCCCCcccccccccCCCCCCCCCCeEEEEEEecchhh
Q 014315 352 ELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLLEIVGFRDAWHG 411 (427)
Q Consensus 352 ~i~l~~~~~~ivv~N~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dDG~LEVv~v~~~~h~ 411 (427)
.++. ...++.++|++++|||+.+.| .|.++||+|||+++++.+..
T Consensus 350 ~~~~--~fl~v~v~N~~~~Ggg~~iaP-------------~A~l~DG~LDlviv~~~s~~ 394 (481)
T PLN02958 350 TIKG--PFVSVWLHNVPWGGEDTLAAP-------------DAKFSDGYLDLILIKDCPKL 394 (481)
T ss_pred Eeec--ceeEEeeccCcccCCCcccCC-------------cccCCCCeEEEEEEcCCCHH
Confidence 2211 233455899999999999887 58999999999999987653
No 15
>PRK12361 hypothetical protein; Provisional
Probab=100.00 E-value=2.1e-32 Score=292.40 Aligned_cols=227 Identities=19% Similarity=0.205 Sum_probs=166.5
Q ss_pred CCcEEEEEcCccCCCChHHHHHHHHHhhccCceEEeec-cCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 014315 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGE-KAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 159 (427)
Q Consensus 81 ~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv~dl~~-~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGDG 159 (427)
+++++||+||+||++++.+.++.+++.|.+.--+++.. +.++++.+ +.+... + ++.+.|||+||||
T Consensus 242 ~~~~~iI~NP~SG~g~~~~~~~~i~~~L~~~~~~~v~~t~~~~~a~~-la~~~~---~---------~~~d~Viv~GGDG 308 (547)
T PRK12361 242 HKRAWLIANPVSGGGKWQEYGEQIQRELKAYFDLTVKLTTPEISAEA-LAKQAR---K---------AGADIVIACGGDG 308 (547)
T ss_pred CCceEEEECCCCCCCcHHHHHHHHHHHHhcCCceEEEECCCCccHHH-HHHHHH---h---------cCCCEEEEECCCc
Confidence 47899999999999999999999999887641133322 23444433 333221 0 2357899999999
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhc-CCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEeeeecCCCCC
Q 014315 160 TASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSF-GWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEG 238 (427)
Q Consensus 160 Tv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~L-Gw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~~g 238 (427)
|||||+|++.+ .+++|||||+||||||||+| ||+.. ..+++++++.|.+++.+++|+++++-
T Consensus 309 Tl~ev~~~l~~----~~~~lgiiP~GTgNdfAr~L~gi~~~-----~~~~~~a~~~i~~g~~~~iD~g~vn~-------- 371 (547)
T PRK12361 309 TVTEVASELVN----TDITLGIIPLGTANALSHALFGLGSK-----LIPVEQACDNIIQGHTQRIDTARCND-------- 371 (547)
T ss_pred HHHHHHHHHhc----CCCCEEEecCCchhHHHHHhcCCCCC-----CccHHHHHHHHHhCCCeEEEEEEEcC--------
Confidence 99999999975 46899999999999999999 99841 12578889999999999999998751
Q ss_pred CCCCCCCCCCCcccccccccccccccccCCcceeccceeeeeccChhHHHHHHHhhccccCccchhcccchhhHHHHHHH
Q 014315 239 SFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAG 318 (427)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~r~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~ 318 (427)
++|+|++|+|+||+|+...++.+ ++..|+++|+..++
T Consensus 372 -----------------------------------~~fln~agiG~da~v~~~~~~~~--------k~~~G~laY~~~~~ 408 (547)
T PRK12361 372 -----------------------------------RLMLLLVGIGFEQKMIESADRER--------KNALGQLAYLDGLW 408 (547)
T ss_pred -----------------------------------eEEEEEEeechhHHHHHhccHHH--------HhccCHHHHHHHHH
Confidence 37999999999999999887654 34569999999999
Q ss_pred hhhcccccccCCCCcCcCceEEEEEEecCCcEEEEeecCceeEEEEEcCCCCcCCCCCCCCcccccccccCCCCCCCCCC
Q 014315 319 TQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDG 398 (427)
Q Consensus 319 ~~~~~~~~l~~~~~k~~~~~i~l~v~~~dg~~~~i~l~~~~~~ivv~N~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dDG 398 (427)
+. +. ..+++ .++|++ ||+. ..+. +..+++++|...|++....-+ ..+++|||
T Consensus 409 ~~------l~--~~~~~--~l~i~~---dg~~-~~~~--~~~~l~v~N~~~~~~~~~~Gg------------g~~~~~DG 460 (547)
T PRK12361 409 RA------VN--ENETL--TLTVTL---DDAE-PQTI--STHSLVVANAAPFTSLLAQGG------------GEPNMTDG 460 (547)
T ss_pred HH------hh--cCCCe--eEEEEE---CCCC-ceEE--EEEEEEEEcCCCcccccccCC------------CCCCCCCc
Confidence 98 54 22332 467777 5541 1121 567888999976533111100 02468999
Q ss_pred eEEEEEEecc
Q 014315 399 LLEIVGFRDA 408 (427)
Q Consensus 399 ~LEVv~v~~~ 408 (427)
+|||++++..
T Consensus 461 ~Ldv~~v~~~ 470 (547)
T PRK12361 461 LLDITWLDSG 470 (547)
T ss_pred eeEEEEEcCC
Confidence 9999999875
No 16
>PF00609 DAGK_acc: Diacylglycerol kinase accessory domain; InterPro: IPR000756 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. The DAG kinase domain is assumed to be an accessory domain. Upon cell stimulation, DAG kinase converts DAG into phosphatidate, initiating the resynthesis of phosphatidylinositols and attenuating protein kinase C activity. It catalyses the reaction: ATP + 1,2-diacylglycerol = ADP + 1,2-diacylglycerol 3-phosphate. The enzyme is stimulated by calcium and phosphatidylserine and phosphorylated by protein kinase C. This domain is always associated with IPR001206 from INTERPRO.; GO: 0004143 diacylglycerol kinase activity, 0007205 activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway
Probab=100.00 E-value=1e-33 Score=257.29 Aligned_cols=140 Identities=36% Similarity=0.628 Sum_probs=123.7
Q ss_pred eeeeeccChhHHHHHHHhhccccCccchhcccchhhHHHHHHHhhhcccccccCCCCcCcCceEEEEEEecCCcEEEEee
Q 014315 276 FWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHI 355 (427)
Q Consensus 276 F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~~~~~~~~~l~~~~~k~~~~~i~l~v~~~dg~~~~i~l 355 (427)
|+||||||+||+|+++||+.|+++|++|++|+.||++|+..|++++ +.+.++++.+.+++++ ||+ .+++
T Consensus 2 ~~NYfsiG~DA~ia~~Fh~~R~~~P~~f~sr~~NK~~Y~~~g~k~~------~~~~~~~~~~~i~l~~---dg~--~~~l 70 (161)
T PF00609_consen 2 MNNYFSIGVDAQIALGFHHSREKNPEKFNSRLLNKLWYAFFGFKAL------FQRSCKNLPKKIELEV---DGK--EVDL 70 (161)
T ss_pred eEecccccHhhHHHHHHhhccccChhhhccHHHHHHHHHHHHHHHH------HhchhcCchhhccccc---CCe--eEee
Confidence 8999999999999999999999999999999999999999999994 3345567666778887 787 7888
Q ss_pred cCceeEEEEEcCCCCcCCCCCCCCcccccccccCCCCCCCCCCeEEEEEEecchhhHHHhcCCCcccccccC
Q 014315 356 PRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLLEIVGFRDAWHGLVLLAPNGHGTRLAQV 427 (427)
Q Consensus 356 ~~~~~~ivv~N~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dDG~LEVv~v~~~~h~~~~~~~~~~~~rlaQ~ 427 (427)
|.++.+|+++|+|||+||.++|+...+.... ..|.+++++||+||||++.+++|++++|+++++++||||+
T Consensus 71 p~~~~~iv~lNIpSy~gG~~~W~~~~~~~~~-~~~~~~~~~Dg~lEVvg~~~~~hl~~~~~g~~~~~rl~Q~ 141 (161)
T PF00609_consen 71 PSSLESIVFLNIPSYGGGVDLWGNSKPDRSK-LKFKKQSMDDGKLEVVGFRGSFHLGQIQAGLSSAKRLAQG 141 (161)
T ss_pred ecceeEEEEEccccccCCcccccCCcccccc-cccccccccCceEEEEEEcCchhhhhhhhccCCceEeecC
Confidence 8789999999999999999999875432111 3577899999999999999999999999999999999997
No 17
>PLN02204 diacylglycerol kinase
Probab=99.96 E-value=1.7e-28 Score=258.91 Aligned_cols=184 Identities=13% Similarity=0.125 Sum_probs=134.4
Q ss_pred CCCCcEEEEEcCccCCCChHHHHHHHHHhhccCce-EEe-eccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEc
Q 014315 79 IPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDL-GEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAG 156 (427)
Q Consensus 79 ~~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv-~dl-~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~G 156 (427)
..+++++|||||.||++++.+.|+.+..+|....+ +++ ..+.++++.+ +.+.+..+ +....+.||+||
T Consensus 157 ~r~k~llVivNP~sGkg~~~~~~~~V~p~f~~a~i~~~v~~T~~aghA~d-~~~~~~~~---------~l~~~D~VVaVG 226 (601)
T PLN02204 157 GRPKNLLVFVHPLSGKGSGSRTWETVSPIFIRAKVKTKVIVTERAGHAFD-VMASISNK---------ELKSYDGVIAVG 226 (601)
T ss_pred CCCceEEEEECCCCCCcchHHHHHHHHHHHHHcCCeEEEEEecCcchHHH-HHHHHhhh---------hccCCCEEEEEc
Confidence 34578999999999999999999999998875432 232 2345677654 22222110 012467899999
Q ss_pred CchHHHHHHHHHhcCCC---------------------------------------------------------------
Q 014315 157 GDGTASWLLGVVSDLKL--------------------------------------------------------------- 173 (427)
Q Consensus 157 GDGTv~~Vln~l~~~~~--------------------------------------------------------------- 173 (427)
||||+|||+|+|...+.
T Consensus 227 GDGt~nEVlNGL~~~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 306 (601)
T PLN02204 227 GDGFFNEILNGYLLSRLKVPYPPSPSDSVHSVQSRGSSSVHEPNETVHECDNEDHSPLLSDSVQEVMNFRTENGSCEGDQ 306 (601)
T ss_pred CccHHHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999963210
Q ss_pred -------CCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEeeeecCCCCCCCCCCCCC
Q 014315 174 -------PHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEGSFDPIAPL 246 (427)
Q Consensus 174 -------~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~~g~~~~~~~~ 246 (427)
...++|||||+|||||||+.+..+. ++..++..|..++.+.+|+++|+-....+
T Consensus 307 ~~~~~~~~~~~~lGIIPaGSgN~~a~~~~g~~--------dp~taa~~Ii~G~~~~lDig~V~~~~~~~----------- 367 (601)
T PLN02204 307 DSDFPFPNERFRFGIIPAGSTDAIVMCTTGER--------DPVTSALHIILGRRVCLDIAQVVRWKTTS----------- 367 (601)
T ss_pred cccccccCCCceEEEECCccHHHHHHHccCCC--------CHHHHHHHHHhCCCeEeeEEEEecccccc-----------
Confidence 1357899999999999999887664 57778888999999999999996321000
Q ss_pred CCCcccccccccccccccccCCcceeccceeeeeccChhHHHHHHHhhccccCccchhcccchhhHHHHHHHhh
Q 014315 247 ELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQ 320 (427)
Q Consensus 247 ~~~~~~~~~~r~~~~~~~~~~~~~~~~r~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~~~ 320 (427)
. +....+.+||.|.+|+||||+|+...++ +|++|+++|.+.+++.
T Consensus 368 -----------------~--~~~~~~~ryf~s~ag~Gf~gdVi~esek----------~R~mG~~rY~~~g~k~ 412 (601)
T PLN02204 368 -----------------T--SEIEPYVRYAASFAGYGFYGDVISESEK----------YRWMGPKRYDYAGTKV 412 (601)
T ss_pred -----------------c--ccccccceEEEEEeecchHHHHHHHhhh----------hcccchHHHHHHHHHH
Confidence 0 0000123689999999999999987543 4467999999999998
No 18
>PF00781 DAGK_cat: Diacylglycerol kinase catalytic domain; InterPro: IPR001206 The DAG-kinase catalytic domain or DAGKc domain is present in mammalian lipid kinases, such as diacylglycerol (DAG), ceramide and sphingosine kinases, as well as in related bacterial proteins [, ]. Eukaryotic DAG-kinase (2.7.1.107 from EC) catalyses the phosphorylation of DAG to phosphatidic acid, thus modulating the balance between the two signaling lipids. At least ten different isoforms have been identified in mammals, which form 5 groups characterised by different functional domains, such as the calcium-binding EF hand (see PDOC00018 from PROSITEDOC), PH (see PDOC50003 from PROSITEDOC), SAM (see PDOC50105 from PROSITEDOC) , DAG/PE-binding C1 domain (see PDOC00379 from PROSITEDOC) and ankyrin repeats (see PDOC50088 from PROSITEDOC) []. In bacteria, an integral membrane DAG kinase forms a homotrimeric protein that lacks the DAGKc domain (see PDOC00820 from PROSITEDOC). In contrast, the bacterial yegS protein is a soluble cytosolic protein that contains the DAGKc domain in the N-terminal part. YegS is a lipid kinase with two structural domains, wherein the active site is located in the interdomain cleft, C-terminal to the DAGKc domain which forms an alpha/beta fold []. The tertiary structure resembles that of NAD kinases and contains a metal-binding site in the C-terminal region [, ]. This domain is usually associated with an accessory domain (see IPR000756 from INTERPRO).; GO: 0004143 diacylglycerol kinase activity, 0007205 activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; PDB: 2JGR_A 2BON_A 3T5P_D 3S40_A 2P1R_A 2QV7_A 2QVL_A.
Probab=99.90 E-value=2.9e-23 Score=181.62 Aligned_cols=122 Identities=25% Similarity=0.316 Sum_probs=81.1
Q ss_pred cEEEEEcCccCCCChHHHHHHHHHhhcc----CceEEeeccCchhHHHHHHHHHHHhhhccchhhhhhccC-cEEEEEcC
Q 014315 83 PVLVFINSKSGGQLGGKLLLTYRSLLNE----NQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKR-LRLIVAGG 157 (427)
Q Consensus 83 ~v~vivNp~SG~~~g~~~~~~~~~~L~~----~qv~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~-~~IIv~GG 157 (427)
+++||+||+||++++. ++.+++.|.. .+++.+....+.+++ .+ ... .... +.||++||
T Consensus 1 k~~vi~Np~sG~~~~~--~~~v~~~l~~~~~~~~~~~t~~~~~~~~~---~~-~~~-----------~~~~~~~ivv~GG 63 (130)
T PF00781_consen 1 KVLVIINPKSGGGRAK--WKKVEPALRAAGIDYEVIETESAGHAEAL---AR-ILA-----------LDDYPDVIVVVGG 63 (130)
T ss_dssp SEEEEEETTSTTSHHH--HHHHHHHHHHTTCEEEEEEESSTTHHHHH---HH-HHH-----------HTTS-SEEEEEES
T ss_pred CEEEEECCCCCCCchh--HHHHHHHHHHcCCceEEEEEeccchHHHH---HH-HHh-----------hccCccEEEEEcC
Confidence 4899999999999988 3555555543 344444332222222 22 111 1233 79999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHH-HHHHHHcCCeEEEEEEEEe
Q 014315 158 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLS-FLEQVKNAKEMQIDSWHIL 229 (427)
Q Consensus 158 DGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~-~l~~i~~a~~~~iD~w~V~ 229 (427)
||||++|+|++.+......+|||+||+||||||||+|||+. +... .+..+..+...++|+.+|+
T Consensus 64 DGTl~~vv~~l~~~~~~~~~~l~iiP~GT~N~~ar~lg~~~--------~~~~~a~~~~~~~~~~~~d~~~v~ 128 (130)
T PF00781_consen 64 DGTLNEVVNGLMGSDREDKPPLGIIPAGTGNDFARSLGIPS--------DPEANAALLIILGRVRKIDVGKVN 128 (130)
T ss_dssp HHHHHHHHHHHCTSTSSS--EEEEEE-SSS-HHHHHTT--S--------SHHH-HHHHHHHSEEEEEEEEEET
T ss_pred ccHHHHHHHHHhhcCCCccceEEEecCCChhHHHHHcCCCC--------CcHHHHHHHHHhCCCcEeEEEEeC
Confidence 99999999999876433468999999999999999999997 2344 4445556667799999875
No 19
>smart00046 DAGKc Diacylglycerol kinase catalytic domain (presumed). Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. DAG can be produced from the hydrolysis of phosphatidylinositol 4,5-bisphosphate (PIP2) by a phosphoinositide-specific phospholipase C and by the degradation of phosphatidylcholine (PC) by a phospholipase C or the concerted actions of phospholipase D and phosphatidate phosphohydrolase. This domain is presumed to be the catalytic domain. Bacterial homologues areknown.
Probab=99.87 E-value=3.5e-22 Score=173.91 Aligned_cols=100 Identities=49% Similarity=0.867 Sum_probs=77.5
Q ss_pred EEEEcCccCCCChHHHHHHHHHhhccCceEEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHH
Q 014315 85 LVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWL 164 (427)
Q Consensus 85 ~vivNp~SG~~~g~~~~~~~~~~L~~~qv~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGDGTv~~V 164 (427)
+||+||+||++++.+++..++..+.+.+++.+......++.+ +.+. ....+.|+++|||||+|+|
T Consensus 1 lvi~NP~sG~~~~~~~~~~~~~~l~~~~v~~t~~~~~~~~~~-~~~~--------------~~~~d~vvv~GGDGTi~~v 65 (124)
T smart00046 1 LVFVNPKSGGGKGVKLLRKFRLLLNPAQVFDLTKKGPAAALV-IFRD--------------LPKFDRVLVCGGDGTVGWV 65 (124)
T ss_pred CEEEcCCCCCCccHHHHHHHHHHcCCceEEEEecCChHHHHH-HHhh--------------cCcCCEEEEEccccHHHHH
Confidence 489999999999999999999999887777665433444332 1111 1134689999999999999
Q ss_pred HHHHhcCCCC-CCCCEEEEeCCCCcchhhhcCCCCC
Q 014315 165 LGVVSDLKLP-HSPPVATVPLGTGNNIPFSFGWGKK 199 (427)
Q Consensus 165 ln~l~~~~~~-~~~plgiIPlGTGNDfAR~LGw~~~ 199 (427)
+|+|.+.... ..+|||+||+||||||||+|||+.+
T Consensus 66 vn~l~~~~~~~~~~plgiiP~GTgNdfar~lgi~~~ 101 (124)
T smart00046 66 LNALDKRELPLPEPPVAVLPLGTGNDLARSLGWGGG 101 (124)
T ss_pred HHHHHhcccccCCCcEEEeCCCChhHHHHHcCCCCC
Confidence 9999864321 1289999999999999999999874
No 20
>KOG1116 consensus Sphingosine kinase, involved in sphingolipid metabolism [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.82 E-value=1.9e-19 Score=187.54 Aligned_cols=174 Identities=21% Similarity=0.216 Sum_probs=129.0
Q ss_pred CCcEEEEEcCccCCCChHHHHHH-HHHhhccCce-EEeec-cCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 014315 81 SCPVLVFINSKSGGQLGGKLLLT-YRSLLNENQV-IDLGE-KAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (427)
Q Consensus 81 ~~~v~vivNp~SG~~~g~~~~~~-~~~~L~~~qv-~dl~~-~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GG 157 (427)
.+.++||+||.+|+|++.++|.. ++.+|....+ |++.. ++|.||.+ +.+.+. ..+.+-||++||
T Consensus 179 ~~~lLV~iNP~gGkGka~~~F~~~v~Pll~~A~i~~evv~T~~~~HAre-i~rt~d------------l~kyDgIv~vsG 245 (579)
T KOG1116|consen 179 PRRLLVFINPFGGKGKAKKLFKNHVEPLLSEAGISFEVVLTTRPNHARE-IVRTLD------------LGKYDGIVCVSG 245 (579)
T ss_pred CccEEEEECCCCCCccHHHHHHhhhhhhhhhcCceEEEEEecCccHHHH-HHHhhh------------ccccceEEEecC
Confidence 47899999999999999998765 5567765433 55443 68999876 444432 135688999999
Q ss_pred chHHHHHHHHHhcCC---CCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEeeeecC
Q 014315 158 DGTASWLLGVVSDLK---LPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKA 234 (427)
Q Consensus 158 DGTv~~Vln~l~~~~---~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~ 234 (427)
||++|||||||.+.. ....+|||+||+||||+||.++.|..++ + -+..+.-.+..+....+|+..+.....
T Consensus 246 DGl~hEVlNGLl~R~D~~~~~klPigiiP~GSGNala~Sv~~~~~~---~--~~~~a~l~iirg~~t~~dv~~v~~~~~- 319 (579)
T KOG1116|consen 246 DGLLHEVLNGLLERPDWEAAVKLPIGIIPCGSGNALAKSVLWTNGP---D--LPLLATLLIIRGRLTPMDVSVVEYAGK- 319 (579)
T ss_pred CcCHHHhhhccccccchhhHhcCceeEeecCCccHHHHHhhcccCc---c--cchHHHHHHHccCCCchheeehhhccC-
Confidence 999999999997632 1257999999999999999999998742 1 133344566788899999988753210
Q ss_pred CCCCCCCCCCCCCCCcccccccccccccccccCCcceeccceeeeeccChhHHHHHHHhhccccCccchhcccchhhHHH
Q 014315 235 PKEGSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYL 314 (427)
Q Consensus 235 ~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~r~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~ 314 (427)
...++.+...-|+-|+|-...++.| ++|..+|.
T Consensus 320 -------------------------------------~~~fSfLs~~wGlIADiDI~SEk~R----------~mG~~Rf~ 352 (579)
T KOG1116|consen 320 -------------------------------------DRHFSFLSAAWGLIADVDIESEKYR----------WMGPARFT 352 (579)
T ss_pred -------------------------------------cceEEEEeeeeeeEEecccchHHHH----------hhcchhhh
Confidence 0126788999999999987776544 45788888
Q ss_pred HHHHhh
Q 014315 315 KLAGTQ 320 (427)
Q Consensus 315 ~~g~~~ 320 (427)
+.++..
T Consensus 353 lg~~~r 358 (579)
T KOG1116|consen 353 LGAFLR 358 (579)
T ss_pred HHHHHH
Confidence 887776
No 21
>smart00045 DAGKa Diacylglycerol kinase accessory domain (presumed). Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. DAG can be produced from the hydrolysis of phosphatidylinositol 4,5-bisphosphate (PIP2) by a phosphoinositide-specific phospholipase C and by the degradation of phosphatidylcholine (PC) by a phospholipase C or the concerted actions of phospholipase D and phosphatidate phosphohydrolase. This domain might either be an accessory domain or else contribute to the catalytic domain. Bacterial homologues are known.
Probab=99.81 E-value=2.6e-20 Score=169.01 Aligned_cols=138 Identities=32% Similarity=0.636 Sum_probs=107.6
Q ss_pred eeeeeccChhHHHHHHHhhccccCccchhcccchhhHHHHHHHhhhcccccccCCCCcCcCceEEEEEEecCCcEEEEee
Q 014315 276 FWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHI 355 (427)
Q Consensus 276 F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~~~~~~~~~l~~~~~k~~~~~i~l~v~~~dg~~~~i~l 355 (427)
|+||+||||||+|++.++..|+++|.++.+++.|+++|++.+++. ++...++++...++|++ ||+ +...
T Consensus 2 ~~N~~giGfDA~V~~~~~~~r~~~~~~~~~~~~g~l~Y~~~~l~~------l~~~~~~~~~~~~~i~~---dg~--~~~~ 70 (160)
T smart00045 2 MNNYFSIGVDAHIALEFHNKREANPEKFNSRLKNKMWYFELGTKD------LFFRTCKDLHERIELEC---DGV--DVDL 70 (160)
T ss_pred ccccccccHhHHHHHHHHHHhhcCchhhcccceeeeeeeecchHH------hhhccccchhhceEEEE---CCE--eccC
Confidence 899999999999999999999989988888888999999999998 33222333223467777 776 4444
Q ss_pred cCceeEEEEEcCCCCcCCCCCCCCcccccccccCCCCCCCCCCeEEEEEEecchhhHHHhcCCCcccccccC
Q 014315 356 PRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLLEIVGFRDAWHGLVLLAPNGHGTRLAQV 427 (427)
Q Consensus 356 ~~~~~~ivv~N~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dDG~LEVv~v~~~~h~~~~~~~~~~~~rlaQ~ 427 (427)
+.++.+++++|++|||||+.+||..++. .+.+++|+++||+|||+++++.+++..++....+.+|+.|+
T Consensus 71 ~~~~~~v~v~N~~~~ggG~~i~p~~~~~---~~~~p~a~~~DG~ldv~~~~~~~~~~~~~~~~~~~v~~~~~ 139 (160)
T smart00045 71 PNSLEGIAVLNIPSYGGGTNLWGTTDKE---DLNFSKQSHDDGLLEVVGLTGAMHMAQIRQVGLAGRRIAQC 139 (160)
T ss_pred CCCccEEEEECCCccccCcccccCCccc---ccccCCCCCCCceEEEEEEcCchhhhhhhhccCCCceeecC
Confidence 3247899999999999999999863322 24567899999999999999998876654444456777764
No 22
>KOG1115 consensus Ceramide kinase [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.41 E-value=1.1e-12 Score=131.33 Aligned_cols=248 Identities=16% Similarity=0.184 Sum_probs=154.4
Q ss_pred CCcEEEEEcCccCCCChHHHHHHHHHhhccCce-EEe-eccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 014315 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDL-GEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 158 (427)
Q Consensus 81 ~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv-~dl-~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGD 158 (427)
++.++|||||.+|+|+|.++|+.+..++--..+ +++ ..+...+|.+-++. + . .++....+-||++|||
T Consensus 158 PknllvFinPfgGkG~g~ki~e~V~~~F~la~v~tkvivTErAnhA~d~~~e-i---~------~~~~~~yDGiv~VGGD 227 (516)
T KOG1115|consen 158 PKNLLVFINPFGGKGNGSKIWETVSKIFILAKVNTKVIVTERANHAFDVMAE-I---Q------NKELHTYDGIVAVGGD 227 (516)
T ss_pred CccEEEEEcCCCCCCcccchhhhhhhhEEeeecceeEEEEccccchhhhhhh-C---C------HhhhhhcccEEEecCc
Confidence 478999999999999999999998776432111 111 12344555432211 1 0 1123356779999999
Q ss_pred hHHHHHHHHHhc-------CC--------CCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEE
Q 014315 159 GTASWLLGVVSD-------LK--------LPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQI 223 (427)
Q Consensus 159 GTv~~Vln~l~~-------~~--------~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~i 223 (427)
|..||+|+++.- .+ ..+.+-+||||.|+.|-..-+-.=.. | ...++| .|.-|....+
T Consensus 228 G~FnEiL~G~llrtQ~~ag~~i~~P~~~lv~~~~RfGiIpAGStd~iv~~t~gt~-----D--~~TSAl-HI~lG~~l~v 299 (516)
T KOG1115|consen 228 GFFNEILNGYLLRTQEVAGFRIEDPDHPLVSERPRFGIIPAGSTDAIVMCTTGTR-----D--PVTSAL-HIILGRKLFV 299 (516)
T ss_pred hhHHHHHhhhhhhhhhhcCcccCCCCCcccCCCceeeeecCCCcCeEEEEeccCC-----c--ccccee-eeEeccceee
Confidence 999999999742 11 12467899999999998776653222 1 233444 3455888999
Q ss_pred EEEEEeeeecCCCCCCCCCCCCCCCCcccccccccccccccccCCcceeccceeeeeccChhHHHHHHHhhccccCccch
Q 014315 224 DSWHILMRMKAPKEGSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKF 303 (427)
Q Consensus 224 D~w~V~~~~~~~~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~r~F~NyfsIG~DA~V~~~f~~~R~~~p~~f 303 (427)
|+-+|.-. . .+-||-.|.+|-||-++|....++.
T Consensus 300 DVctVht~------------------------------~--------kLiRysaSa~gYGFyGDvl~dSEKY-------- 333 (516)
T KOG1115|consen 300 DVCTVHTI------------------------------E--------KLIRYSASAAGYGFYGDVLSDSEKY-------- 333 (516)
T ss_pred eeeeeeec------------------------------c--------hheeeehhhhcccccchhhhhhhhh--------
Confidence 99888510 0 1125778899999999999887754
Q ss_pred hcccchhhHHHHHHHhhhcccccccCCCCcCc------C----------ceEEEEEEecCCcEEEEeecCceeEEEEEcC
Q 014315 304 QNQLVNQSTYLKLAGTQGWFLAPLLHPSSRNI------A----------QMAKVKIMKKQGQWEELHIPRYIRSIVCLNL 367 (427)
Q Consensus 304 ~srl~nkl~Y~~~g~~~~~~~~~l~~~~~k~~------~----------~~i~l~v~~~dg~~~~i~l~~~~~~ivv~N~ 367 (427)
|+++..+|=++++|.. +.|+.++.- + +-.+..- .+.+|..+. +....|.|+|+
T Consensus 334 --RWmGp~RYDfsglKtf-----lkH~~YegeVsFlpa~sen~~qe~~~~g~~~~~--~~k~Wq~~~--g~Fl~V~c~ai 402 (516)
T KOG1115|consen 334 --RWMGPKRYDFSGLKTF-----LKHRSYEGEVSFLPAESENPCQEPCPSGASLHT--RSKTWQRNT--GRFLKVLCRAI 402 (516)
T ss_pred --hccCchhhhhHHHHHH-----HhccccceEEEecccccCCchhccccccCCccc--Ccchhhhhh--hheeeeeEeec
Confidence 4568889999999982 112211110 0 0001111 023343332 34567788888
Q ss_pred CCCcCCCCCCCCcccccccccCCCCCCCCCCeEEEEEEecchhhHHH
Q 014315 368 PSFSGGLDPWGKPFRKKLRERGLTPPYVDDGLLEIVGFRDAWHGLVL 414 (427)
Q Consensus 368 ~s~GGG~~~w~~~~~~~~~~~~~~~a~~dDG~LEVv~v~~~~h~~~~ 414 (427)
|..-.--.-|-. +.+.++||-++++.++..+....+
T Consensus 403 pciC~~~PrGLa-----------P~T~LndGs~dLil~R~~SRF~fi 438 (516)
T KOG1115|consen 403 PCICNSKPRGLA-----------PSTTLNDGSEDLILCRTKSRFLFI 438 (516)
T ss_pred cccccCCCCCcC-----------CccccCCCccceeeeecccchHHH
Confidence 865321111111 246899999999999988765443
No 23
>KOG4435 consensus Predicted lipid kinase [Lipid transport and metabolism; Signal transduction mechanisms]
Probab=98.78 E-value=7e-08 Score=97.14 Aligned_cols=132 Identities=18% Similarity=0.098 Sum_probs=78.1
Q ss_pred CCcEEEEEcCccCCCChHHHHH-HHHHhhc--cCceEEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 014315 81 SCPVLVFINSKSGGQLGGKLLL-TYRSLLN--ENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (427)
Q Consensus 81 ~~~v~vivNp~SG~~~g~~~~~-~~~~~L~--~~qv~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GG 157 (427)
+++++|++||.+-.+....... -...+|+ ..||-.+.....+++-. +...++ ...+.|+|+||
T Consensus 60 ~Kkv~V~~Np~ank~~~r~~f~kna~P~lHLaG~~V~Ivktd~~gqak~-l~e~~~-------------t~~Dii~VaGG 125 (535)
T KOG4435|consen 60 PKKVFVLVNPEANKRGCRDQFNKNALPLLHLAGVQVDIVKTDNQGQAKA-LAEAVD-------------TQEDIIYVAGG 125 (535)
T ss_pred cceEEEEechhhccchhhhhhhcccchheeeccceEEEEecCcHHHHHH-HHHHhc-------------cCCCeEEEecC
Confidence 4889999999987655544333 3334554 34442232223333211 111111 12489999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCe---EEEEEEE
Q 014315 158 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKE---MQIDSWH 227 (427)
Q Consensus 158 DGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~---~~iD~w~ 227 (427)
|||+++|+.++...+ ....|++++|.|--|-...+.-..--..+++-..+-+++..+.+++. .++|+-.
T Consensus 126 DGT~~eVVTGi~Rrr-~~~~pv~~~P~G~~~l~~~s~l~~vfe~~d~V~h~~~a~~avikde~ksv~~fdv~~ 197 (535)
T KOG4435|consen 126 DGTIGEVVTGIFRRR-KAQLPVGFYPGGYDNLWLKSMLPSVFENSDDVRHACEAAMAVIKDEKKSVYAFDVTT 197 (535)
T ss_pred CCcHHHhhHHHHhcc-cccCceeeccCccchHhhhhhchhhhccchHHHHHHHHHHHHhcccccceEEEEecc
Confidence 999999999998754 46789999999987655444322211122233444455666666666 5666643
No 24
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=98.17 E-value=1.1e-05 Score=79.90 Aligned_cols=113 Identities=12% Similarity=0.085 Sum_probs=71.3
Q ss_pred cEEEEEcCccCCCChHHHHHHHHHhhccCce-EEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHH
Q 014315 83 PVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTA 161 (427)
Q Consensus 83 ~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv-~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGDGTv 161 (427)
++.+++|+. ...+.++++++.+.|....+ +.+........-......+.. . ...+.+.||++|||||+
T Consensus 2 ~v~iv~~~~--k~~~~~~~~~I~~~L~~~g~~v~v~~~~~~~~~~~~~~~~~~-------~--~~~~~d~vi~iGGDGTl 70 (277)
T PRK03708 2 RFGIVARRD--KEEALKLAYRVYDFLKVSGYEVVVDSETYEHLPEFSEEDVLP-------L--EEMDVDFIIAIGGDGTI 70 (277)
T ss_pred EEEEEecCC--CHHHHHHHHHHHHHHHHCCCEEEEecchhhhcCccccccccc-------c--cccCCCEEEEEeCcHHH
Confidence 477787774 45677888888887765432 222210000000000000000 0 00135789999999999
Q ss_pred HHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeE
Q 014315 162 SWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEM 221 (427)
Q Consensus 162 ~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~ 221 (427)
.++++ +.. ..+||..||+||. +|...+. + +++.++++++.+++..
T Consensus 71 L~a~~-~~~----~~~pi~gIn~G~l-GFl~~~~-~--------~~~~~~l~~i~~g~~~ 115 (277)
T PRK03708 71 LRIEH-KTK----KDIPILGINMGTL-GFLTEVE-P--------EETFFALSRLLEGDYF 115 (277)
T ss_pred HHHHH-hcC----CCCeEEEEeCCCC-CccccCC-H--------HHHHHHHHHHHcCCce
Confidence 99999 654 4688999999998 8888775 2 2688899999998754
No 25
>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=98.12 E-value=2e-05 Score=78.98 Aligned_cols=123 Identities=15% Similarity=0.112 Sum_probs=73.0
Q ss_pred CCCcEEEEEcCccCCCChHHHHHHHHHhhccC--ceEEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 014315 80 PSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (427)
Q Consensus 80 ~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~--qv~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GG 157 (427)
.++++++|+|| |...+.+.+..+.+.|... +++................. .....+.||++||
T Consensus 2 ~~kkv~lI~n~--~~~~~~~~~~~i~~~L~~~g~~v~v~~~~~~~~~~~~~~~~-------------~~~~~d~vi~~GG 66 (305)
T PRK02645 2 QLKQVIIAYKA--GSSQAKEAAERCAKQLEARGCKVLMGPSGPKDNPYPVFLAS-------------ASELIDLAIVLGG 66 (305)
T ss_pred CcCEEEEEEeC--CCHHHHHHHHHHHHHHHHCCCEEEEecCchhhccccchhhc-------------cccCcCEEEEECC
Confidence 35679999999 5556667788887777543 33211111111111000000 0123578999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEEeC-CCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEee
Q 014315 158 DGTASWLLGVVSDLKLPHSPPVATVPL-GTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILM 230 (427)
Q Consensus 158 DGTv~~Vln~l~~~~~~~~~plgiIPl-GTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~ 230 (427)
|||+..+++.+.. ..+||..|.+ |+-.=|+..-.. ..+ .++|+.+.+++..--.+..+..
T Consensus 67 DGT~l~~~~~~~~----~~~pv~gin~~G~lGFL~~~~~~--------~~~-~~~l~~i~~g~~~i~~r~~L~~ 127 (305)
T PRK02645 67 DGTVLAAARHLAP----HDIPILSVNVGGHLGFLTHPRDL--------LQD-ESVWDRLQEDRYAIERRMMLQA 127 (305)
T ss_pred cHHHHHHHHHhcc----CCCCEEEEecCCcceEecCchhh--------cch-HHHHHHHHcCCceEEEeeEEEE
Confidence 9999999999864 4678888998 664333321100 112 6789999999865445555443
No 26
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=97.69 E-value=0.00027 Score=70.47 Aligned_cols=124 Identities=14% Similarity=0.112 Sum_probs=74.7
Q ss_pred CCcEEEEEcCccCCCChHHHHHHHHHhhccCce-EEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 014315 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 159 (427)
Q Consensus 81 ~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv-~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGDG 159 (427)
.+.+.+|.|+.. ..+.+++..+.+.|....+ +.+... ....+. .. ... .. .+.......+.||++||||
T Consensus 5 ~~~i~iv~~~~~--~~~~~~~~~i~~~l~~~g~~v~~~~~-~~~~~~-~~-~~~----~~-~~~~~~~~~d~vi~lGGDG 74 (292)
T PRK03378 5 FKCIGIVGHPRH--PTALTTHEMLYHWLTSKGYEVIVEQQ-IAHELQ-LK-NVK----TG-TLAEIGQQADLAIVVGGDG 74 (292)
T ss_pred CCEEEEEEeCCC--HHHHHHHHHHHHHHHHCCCEEEEecc-hhhhcC-cc-ccc----cc-chhhcCCCCCEEEEECCcH
Confidence 466889988754 5677778888887755432 112211 001000 00 000 00 0000012357899999999
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEEeCCCCc-chhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEe
Q 014315 160 TASWLLGVVSDLKLPHSPPVATVPLGTGN-NIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 229 (427)
Q Consensus 160 Tv~~Vln~l~~~~~~~~~plgiIPlGTGN-DfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~ 229 (427)
|+..++..+... .+.+||.++|| +|...+.. +++.++|+.+.+++..--.+..+.
T Consensus 75 T~L~aa~~~~~~------~~Pilgin~G~lGFl~~~~~---------~~~~~~l~~i~~g~~~i~~r~~L~ 130 (292)
T PRK03378 75 NMLGAARVLARY------DIKVIGINRGNLGFLTDLDP---------DNALQQLSDVLEGHYISEKRFLLE 130 (292)
T ss_pred HHHHHHHHhcCC------CCeEEEEECCCCCcccccCH---------HHHHHHHHHHHcCCceEEEEEEEE
Confidence 999999887642 25588889999 78777652 368889999999876544454444
No 27
>COG3199 Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only]
Probab=97.44 E-value=0.0014 Score=65.92 Aligned_cols=58 Identities=26% Similarity=0.334 Sum_probs=42.8
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcC
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNA 218 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a 218 (427)
.-+.|+.+|||||.-.|++++. .++||==||.||-|=++ .+-+. +++...++..+.++
T Consensus 100 gVdlIvfaGGDGTarDVa~av~-----~~vPvLGipaGvk~~Sg-vfA~~-------P~~aa~l~~~~lkg 157 (355)
T COG3199 100 GVDLIVFAGGDGTARDVAEAVG-----ADVPVLGIPAGVKNYSG-VFALS-------PEDAARLLGAFLKG 157 (355)
T ss_pred CceEEEEeCCCccHHHHHhhcc-----CCCceEeeccccceecc-ccccC-------hHHHHHHHHHHhcc
Confidence 3578999999999999999984 46788889999966443 22222 23567777777777
No 28
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=97.20 E-value=0.0038 Score=62.40 Aligned_cols=122 Identities=20% Similarity=0.160 Sum_probs=69.5
Q ss_pred CCcEEEEEcCccCCCChHHHHHHHHHhhccC--ceEEeeccC---chhHHHHHHHHHHHhhhccchhhhhhccCcEEEEE
Q 014315 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QVIDLGEKA---PDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVA 155 (427)
Q Consensus 81 ~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~--qv~dl~~~~---p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~ 155 (427)
++.+.||+|+.. ..+.++++.+.+.|... +++...... +.+... ...... + ....+.||++
T Consensus 4 ~~~v~iv~~~~k--~~a~e~~~~i~~~L~~~giev~v~~~~~~~~~~~~~~--~~~~~~-------~---~~~~d~vi~~ 69 (295)
T PRK01231 4 FRNIGLIGRLGS--SSVVETLRRLKDFLLDRGLEVILDEETAEVLPGHGLQ--TVSRKL-------L---GEVCDLVIVV 69 (295)
T ss_pred CCEEEEEecCCC--HHHHHHHHHHHHHHHHCCCEEEEecchhhhcCccccc--ccchhh-------c---ccCCCEEEEE
Confidence 346899999876 45667788887777543 222111111 110000 000000 0 1135789999
Q ss_pred cCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEee
Q 014315 156 GGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILM 230 (427)
Q Consensus 156 GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~ 230 (427)
|||||+..+++.+.. ..+||--|.+|+ ||.-.. .+.++++++|+.+.+++..--.+..+..
T Consensus 70 GGDGt~l~~~~~~~~----~~~Pvlgin~G~-------lGFl~~---~~~~~~~~~l~~~~~g~~~i~~r~~L~~ 130 (295)
T PRK01231 70 GGDGSLLGAARALAR----HNVPVLGINRGR-------LGFLTD---IRPDELEFKLAEVLDGHYQEEERFLLEA 130 (295)
T ss_pred eCcHHHHHHHHHhcC----CCCCEEEEeCCc-------cccccc---CCHHHHHHHHHHHHcCCceEEEEEEEEE
Confidence 999999999988753 346655566664 332221 1235788899999998764444444443
No 29
>PF01513 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Members of this family are ATP-NAD kinases 2.7.1.23 from EC. The enzymes catalyse the phosphorylation of NAD to NADP utilizing ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus.; GO: 0003951 NAD+ kinase activity, 0008152 metabolic process; PDB: 1U0T_B 1U0R_D 1Y3H_A 1Y3I_A 3AFO_B 1YT5_B 2AN1_A 2I2A_A 3V8P_A 2I1W_A ....
Probab=96.87 E-value=0.0033 Score=62.37 Aligned_cols=69 Identities=22% Similarity=0.204 Sum_probs=48.6
Q ss_pred ccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEE
Q 014315 147 EKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSW 226 (427)
Q Consensus 147 ~~~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w 226 (427)
+..+.||++|||||+-.++..+.. ..+||--|++|| +.|--.+.. +++.++++.+.+++...-.+.
T Consensus 75 ~~~D~ii~lGGDGT~L~~~~~~~~----~~~Pilgin~G~-lgfl~~~~~---------~~~~~~l~~~~~g~~~~~~r~ 140 (285)
T PF01513_consen 75 EGVDLIIVLGGDGTFLRAARLFGD----YDIPILGINTGT-LGFLTEFEP---------EDIEEALEKILAGEYSIEERM 140 (285)
T ss_dssp CCSSEEEEEESHHHHHHHHHHCTT----ST-EEEEEESSS-STSSSSEEG---------CGHHHHHHHHHHTHCEEEEEE
T ss_pred cCCCEEEEECCCHHHHHHHHHhcc----CCCcEEeecCCC-ccccccCCH---------HHHHHHHHHHhcCCeEEEEee
Confidence 356899999999999999988764 367888889998 444433322 368888888888766544444
Q ss_pred EEe
Q 014315 227 HIL 229 (427)
Q Consensus 227 ~V~ 229 (427)
.+.
T Consensus 141 ~l~ 143 (285)
T PF01513_consen 141 RLE 143 (285)
T ss_dssp EEE
T ss_pred eEE
Confidence 443
No 30
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=96.77 E-value=0.016 Score=57.88 Aligned_cols=124 Identities=13% Similarity=0.086 Sum_probs=69.2
Q ss_pred CCcEEEEEcCccCCCChHHHHHHHHHhhccCce-EEeeccCchhHHHHHHHHHHHhhhccchhh-hhh-ccCcEEEEEcC
Q 014315 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFA-SEI-EKRLRLIVAGG 157 (427)
Q Consensus 81 ~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv-~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a-~~~-~~~~~IIv~GG 157 (427)
.+.+.+|+|+.. ..+.++++.+.+.|....+ +.+..... .... . ..+. .+. .+. ...+.||++||
T Consensus 5 ~~~v~iv~~~~~--~~~~e~~~~i~~~L~~~g~~v~v~~~~~-~~~~-~-~~~~-------~~~~~~~~~~~d~vi~~GG 72 (291)
T PRK02155 5 FKTVALIGRYQT--PGIAEPLESLAAFLAKRGFEVVFEADTA-RNIG-L-TGYP-------ALTPEEIGARADLAVVLGG 72 (291)
T ss_pred CCEEEEEecCCC--HHHHHHHHHHHHHHHHCCCEEEEecchh-hhcC-c-cccc-------ccChhHhccCCCEEEEECC
Confidence 356888888755 4566778888877754332 11211100 0000 0 0000 000 001 13578999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEee
Q 014315 158 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILM 230 (427)
Q Consensus 158 DGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~ 230 (427)
|||+..+++.+.. ..+||-=|.+|+=.=|+ .+ ..+++.++|+.+.+++..--.++.+..
T Consensus 73 DGt~l~~~~~~~~----~~~pilGIn~G~lGFL~---~~-------~~~~~~~~l~~~~~g~~~i~~r~~L~~ 131 (291)
T PRK02155 73 DGTMLGIGRQLAP----YGVPLIGINHGRLGFIT---DI-------PLDDMQETLPPMLAGNYEEEERMLLEA 131 (291)
T ss_pred cHHHHHHHHHhcC----CCCCEEEEcCCCccccc---cC-------CHHHHHHHHHHHHcCCceEEEeEEEEE
Confidence 9999999998764 24454446666532111 12 235788899999999865445555443
No 31
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.73 E-value=0.022 Score=56.74 Aligned_cols=123 Identities=17% Similarity=0.133 Sum_probs=69.3
Q ss_pred CCCCCcEEEEEcCccCCCChHHHHHHHHHhhccCce-EEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEc
Q 014315 78 LIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAG 156 (427)
Q Consensus 78 ~~~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv-~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~G 156 (427)
+...+.+.+|+|+. . .+.++++.+...|....+ +.+.. .....+ . . .+-......++.+.||+.|
T Consensus 7 ~~~~~~i~ii~~~~--~-~~~~~~~~i~~~l~~~g~~~~~~~-~~~~~~----~-~-----~~~~~~~~~~~~Dlvi~iG 72 (287)
T PRK14077 7 HKNIKKIGLVTRPN--V-SLDKEILKLQKILSIYKVEILLEK-ESAEIL----D-L-----PGYGLDELFKISDFLISLG 72 (287)
T ss_pred cccCCEEEEEeCCc--H-HHHHHHHHHHHHHHHCCCEEEEec-chhhhh----c-c-----cccchhhcccCCCEEEEEC
Confidence 34457799999986 3 677888888887765432 21211 111100 0 0 0000000012357899999
Q ss_pred CchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEE
Q 014315 157 GDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHI 228 (427)
Q Consensus 157 GDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V 228 (427)
||||+-.++..+.. ..+||--|-+|+ ||.=.. ...++++++|+++.+++..--.+..+
T Consensus 73 GDGT~L~aa~~~~~----~~~PilGIN~G~-------lGFLt~---~~~~~~~~~l~~i~~g~y~ie~r~~L 130 (287)
T PRK14077 73 GDGTLISLCRKAAE----YDKFVLGIHAGH-------LGFLTD---ITVDEAEKFFQAFFQGEFEIEKPYML 130 (287)
T ss_pred CCHHHHHHHHHhcC----CCCcEEEEeCCC-------cccCCc---CCHHHHHHHHHHHHcCCCeEEEEEEE
Confidence 99999888887654 245544456665 343221 12357888999999987543333333
No 32
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.69 E-value=0.027 Score=56.60 Aligned_cols=127 Identities=18% Similarity=0.166 Sum_probs=68.9
Q ss_pred CCCcEEEEEcCccCCCChHHHHHHHHHhhccCc--eEEeeccCchhHHHHHHHHHHHh--hhccchhhhhh-ccCcEEEE
Q 014315 80 PSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--VIDLGEKAPDKVLHQLYVTLEKF--KAAGDVFASEI-EKRLRLIV 154 (427)
Q Consensus 80 ~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~q--v~dl~~~~p~~~l~~~~~~l~~l--~~~gd~~a~~~-~~~~~IIv 154 (427)
+++.+.+|.|+.. ..+.++.+.+...|.... ++..... ...+..-...+.+- ...-+ ..... +..+.||+
T Consensus 4 ~~~~I~iv~~~~~--~~~~~~~~~l~~~L~~~g~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~vi~ 78 (306)
T PRK03372 4 ASRRVLLVAHTGR--DEATEAARRVAKQLGDAGIGVRVLDAE--AVDLGATHPAPDDFRAMEVVD-ADPDAADGCELVLV 78 (306)
T ss_pred CccEEEEEecCCC--HHHHHHHHHHHHHHHHCCCEEEEeech--hhhhccccccccccccccccc-chhhcccCCCEEEE
Confidence 4467889988744 456677888888775543 3221110 01000000000000 00000 00001 23578999
Q ss_pred EcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEE
Q 014315 155 AGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDS 225 (427)
Q Consensus 155 ~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~ 225 (427)
.|||||+-.++..+.. ..+||--|.+|+ ||.=.. ...++++++|+++.+++..--.+
T Consensus 79 lGGDGT~L~aar~~~~----~~~PilGIN~G~-------lGFL~~---~~~~~~~~~l~~i~~g~y~i~~R 135 (306)
T PRK03372 79 LGGDGTILRAAELARA----ADVPVLGVNLGH-------VGFLAE---AEAEDLDEAVERVVDRDYRVEER 135 (306)
T ss_pred EcCCHHHHHHHHHhcc----CCCcEEEEecCC-------Cceecc---CCHHHHHHHHHHHHcCCceEEEe
Confidence 9999999999887654 346666688887 333221 12357888999999998654343
No 33
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.27 E-value=0.07 Score=53.43 Aligned_cols=127 Identities=16% Similarity=0.104 Sum_probs=69.8
Q ss_pred CCcEEEEEcCccCCCChHHHHHHHHHhhccCce-EEeec-cCc-hhHHHHHHHHHHHhhhccchhhhhh-ccCcEEEEEc
Q 014315 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGE-KAP-DKVLHQLYVTLEKFKAAGDVFASEI-EKRLRLIVAG 156 (427)
Q Consensus 81 ~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv-~dl~~-~~p-~~~l~~~~~~l~~l~~~gd~~a~~~-~~~~~IIv~G 156 (427)
.+.+.+|+|+.. ..+.+++..+.+.|....+ +.+.. ... ......-..... . . .. .+. +..+.||+.|
T Consensus 5 ~~~i~ii~~~~~--~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~---~-~~-~~~~~~~D~vi~lG 76 (296)
T PRK04539 5 FHNIGIVTRPNT--PDIQDTAHTLITFLKQHGFTVYLDEVGIKEGCIYTQDTVGCH-I---V-NK-TELGQYCDLVAVLG 76 (296)
T ss_pred CCEEEEEecCCC--HHHHHHHHHHHHHHHHCCCEEEEecccccccchhcccccccc-c---c-ch-hhcCcCCCEEEEEC
Confidence 567999999855 4567778888887754332 22221 000 001000000000 0 0 00 001 2357899999
Q ss_pred CchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEe
Q 014315 157 GDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 229 (427)
Q Consensus 157 GDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~ 229 (427)
||||+-.++..+.. ..+||-=|-+|+ ||.=... ..+++.++|+.+.+++...-.+..+.
T Consensus 77 GDGT~L~aa~~~~~----~~~PilGIN~G~-------lGFL~~~---~~~~~~~~l~~i~~g~~~~~~r~~l~ 135 (296)
T PRK04539 77 GDGTFLSVAREIAP----RAVPIIGINQGH-------LGFLTQI---PREYMTDKLLPVLEGKYLAEERILIE 135 (296)
T ss_pred CcHHHHHHHHHhcc----cCCCEEEEecCC-------CeEeecc---CHHHHHHHHHHHHcCCceEEEeeeEE
Confidence 99999999887754 245544466676 4443321 23568889999998876444444443
No 34
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.26 E-value=0.06 Score=54.12 Aligned_cols=120 Identities=15% Similarity=0.083 Sum_probs=64.1
Q ss_pred CcEEEEEcCccCCCChHHHHHHHHHhhccCce-EEeeccCchhHHHHHHHH---H-HHhhhccchhhhhh-ccCcEEEEE
Q 014315 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVT---L-EKFKAAGDVFASEI-EKRLRLIVA 155 (427)
Q Consensus 82 ~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv-~dl~~~~p~~~l~~~~~~---l-~~l~~~gd~~a~~~-~~~~~IIv~ 155 (427)
+.+.+|+|+.. ..+.++...+.+.|....+ +.+... ....+. .... . ..-..+. .. ... +..+.||++
T Consensus 2 ~~igiv~n~~~--~~~~~~~~~l~~~L~~~g~~v~~~~~-~~~~~~-~~~~~~~~~~~~~~~~-~~-~~~~~~~Dlvi~i 75 (305)
T PRK02649 2 PKAGIIYNDGK--PLAVRTAEELQDKLEAAGWEVVRASS-SGGILG-YANPDQPVCHTGIDQL-VP-PGFDSSMKFAIVL 75 (305)
T ss_pred CEEEEEEcCCC--HHHHHHHHHHHHHHHHCCCEEEEecc-hhhhcC-cccccccccccccccc-Ch-hhcccCcCEEEEE
Confidence 46888989743 4577788888887765432 222211 000000 0000 0 0000000 00 001 235789999
Q ss_pred cCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeE
Q 014315 156 GGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEM 221 (427)
Q Consensus 156 GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~ 221 (427)
|||||+-.++..+.. ..+||--|-+|+ ||.=.. ...+++.++|+.+.+++..
T Consensus 76 GGDGTlL~aar~~~~----~~iPilGIN~G~-------lGFLt~---~~~~~~~~~l~~l~~g~y~ 127 (305)
T PRK02649 76 GGDGTVLSAARQLAP----CGIPLLTINTGH-------LGFLTE---AYLNQLDEAIDQVLAGQYT 127 (305)
T ss_pred eCcHHHHHHHHHhcC----CCCcEEEEeCCC-------Cccccc---CCHHHHHHHHHHHHcCCcE
Confidence 999999999887754 245544456665 442221 1235788899999998754
No 35
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.16 E-value=0.088 Score=51.86 Aligned_cols=105 Identities=10% Similarity=0.057 Sum_probs=63.1
Q ss_pred CcEEEEEcCccCCCChHHHHHHHHHhhccCceEEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHH
Q 014315 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTA 161 (427)
Q Consensus 82 ~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGDGTv 161 (427)
+.+.+++|+.. .+.++.+.++++|....+-.... . ++.+.||+.|||||+
T Consensus 3 ~~i~iv~~~~~---~a~~~~~~l~~~l~~~g~~~~~~--~-------------------------~~~D~vi~lGGDGT~ 52 (264)
T PRK03501 3 RNLFFFYKRDK---ELVEKVKPLKKIAEEYGFTVVDH--P-------------------------KNANIIVSIGGDGTF 52 (264)
T ss_pred cEEEEEECCCH---HHHHHHHHHHHHHHHCCCEEEcC--C-------------------------CCccEEEEECCcHHH
Confidence 46778888766 56678888888776543211110 0 124689999999999
Q ss_pred HHHHHHHhcCCCCCCCCEEEEeC-CCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEe
Q 014315 162 SWLLGVVSDLKLPHSPPVATVPL-GTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 229 (427)
Q Consensus 162 ~~Vln~l~~~~~~~~~plgiIPl-GTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~ 229 (427)
-.++..+... ..+|+--|.+ | .||.=.. ...++++++++.+.+++..--.+..+.
T Consensus 53 L~a~~~~~~~---~~~pilgIn~~G-------~lGFL~~---~~~~~~~~~l~~i~~g~~~~~~r~~l~ 108 (264)
T PRK03501 53 LQAVRKTGFR---EDCLYAGISTKD-------QLGFYCD---FHIDDLDKMIQAITKEEIEVRKYPTIE 108 (264)
T ss_pred HHHHHHhccc---CCCeEEeEecCC-------CCeEccc---CCHHHHHHHHHHHHcCCcEEEEeeeEE
Confidence 8887766431 1355322455 4 3343221 123578889999999876433444333
No 36
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=96.02 E-value=0.11 Score=51.83 Aligned_cols=68 Identities=16% Similarity=0.226 Sum_probs=45.6
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEE
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWH 227 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~ 227 (427)
..+.||+.|||||+-.++..+.. ..+||-=|-+|+ ||.=.. ...++++++|+.+.+++..--.+..
T Consensus 64 ~~dlvi~lGGDGT~L~aa~~~~~----~~~PilGIN~G~-------lGFLt~---~~~~~~~~~l~~i~~g~~~i~~r~~ 129 (292)
T PRK01911 64 SADMVISIGGDGTFLRTATYVGN----SNIPILGINTGR-------LGFLAT---VSKEEIEETIDELLNGDYTIEERSL 129 (292)
T ss_pred CCCEEEEECCcHHHHHHHHHhcC----CCCCEEEEecCC-------CCcccc---cCHHHHHHHHHHHHcCCceEEEEee
Confidence 35789999999999988887754 245544466776 443321 1235788899999999865444444
Q ss_pred Ee
Q 014315 228 IL 229 (427)
Q Consensus 228 V~ 229 (427)
+.
T Consensus 130 L~ 131 (292)
T PRK01911 130 LQ 131 (292)
T ss_pred EE
Confidence 43
No 37
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=95.76 E-value=0.14 Score=54.57 Aligned_cols=125 Identities=18% Similarity=0.217 Sum_probs=65.6
Q ss_pred CCCCCcEEEEEcCccCCCChHHHHHHHHHhhcc---CceEEeeccCchhHHHH--HHHHHHHhhhccchhhhhh-ccCcE
Q 014315 78 LIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNE---NQVIDLGEKAPDKVLHQ--LYVTLEKFKAAGDVFASEI-EKRLR 151 (427)
Q Consensus 78 ~~~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~---~qv~dl~~~~p~~~l~~--~~~~l~~l~~~gd~~a~~~-~~~~~ 151 (427)
..+++.+.||.||.. ..+.+++..+...|.. .+++. ... ....+.. ........-...+.+ .+. ...+.
T Consensus 191 ~~~p~~VgIV~n~~k--~~a~el~~~I~~~L~~~~gi~V~v-e~~-~a~~l~~~~~~~~~~~~~~~~~~~-~~l~~~~Dl 265 (508)
T PLN02935 191 ESDPQTVLIITKPNS--TSVRVLCAEMVRWLREQKGLNIYV-EPR-VKKELLSESSYFNFVQTWEDEKEI-LLLHTKVDL 265 (508)
T ss_pred cCCCCEEEEEecCCC--HHHHHHHHHHHHHHHhcCCCEEEE-ech-hhhhhccccccccccccccccchh-hhcccCCCE
Confidence 445688999999865 4566777777776652 23332 110 0000000 000000000000000 001 23578
Q ss_pred EEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeE
Q 014315 152 LIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEM 221 (427)
Q Consensus 152 IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~ 221 (427)
||++|||||+-.++..+.. ..+||--|.+|+ ||.=.. ...+++.++|+.|.++...
T Consensus 266 VIsiGGDGTlL~Aar~~~~----~~iPILGIN~G~-------LGFLt~---i~~~e~~~~Le~il~G~y~ 321 (508)
T PLN02935 266 VITLGGDGTVLWAASMFKG----PVPPVVPFSMGS-------LGFMTP---FHSEQYRDCLDAILKGPIS 321 (508)
T ss_pred EEEECCcHHHHHHHHHhcc----CCCcEEEEeCCC-------cceecc---cCHHHHHHHHHHHHcCCce
Confidence 9999999999999887754 234543355554 222111 1235788899999998754
No 38
>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=95.15 E-value=0.26 Score=48.49 Aligned_cols=67 Identities=21% Similarity=0.203 Sum_probs=41.2
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHH-HHHHHHcCCeEEEEEEE
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLS-FLEQVKNAKEMQIDSWH 227 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~-~l~~i~~a~~~~iD~w~ 227 (427)
.+.||+.|||||+-.++..+.. ..+||--|-+|+ ||.=... ..+++.+ +++.+.+.+.....+.+
T Consensus 34 ~D~vi~iGGDGT~L~a~~~~~~----~~iPilGIN~G~-------lGFL~~~---~~~~~~~~~~~~l~~~~~~~r~~L~ 99 (259)
T PRK00561 34 ADYLFVLGGDGFFVSTAANYNC----AGCKVVGINTGH-------LGFYTSF---NETDLDQNFANKLDQLKFTQIDLLE 99 (259)
T ss_pred CCEEEEECCcHHHHHHHHHhcC----CCCcEEEEecCC-------Ccccccc---CHHHHHHHHHHHHhhCCeEEEEEEE
Confidence 5789999999999988877653 345655577775 4432211 2245666 77777655444444444
Q ss_pred Ee
Q 014315 228 IL 229 (427)
Q Consensus 228 V~ 229 (427)
+.
T Consensus 100 ~~ 101 (259)
T PRK00561 100 VQ 101 (259)
T ss_pred EE
Confidence 43
No 39
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=95.09 E-value=0.36 Score=47.27 Aligned_cols=67 Identities=25% Similarity=0.374 Sum_probs=44.0
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEE
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWH 227 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~ 227 (427)
..+.||++|||||+-.++..+ .+||--|-+|+ ||.=.. ...+++.++++++.+++.....++.
T Consensus 41 ~~d~vi~iGGDGT~L~a~~~~-------~~Pilgin~G~-------lGfl~~---~~~~~~~~~l~~~~~g~~~~~~r~~ 103 (256)
T PRK14075 41 TADLIIVVGGDGTVLKAAKKV-------GTPLVGFKAGR-------LGFLSS---YTLEEIDRFLEDLKNWNFREEKRWF 103 (256)
T ss_pred CCCEEEEECCcHHHHHHHHHc-------CCCEEEEeCCC-------Cccccc---cCHHHHHHHHHHHHcCCcEEEEeeE
Confidence 357899999999998777655 24433345554 444321 2335688899999999876555555
Q ss_pred Eeee
Q 014315 228 ILMR 231 (427)
Q Consensus 228 V~~~ 231 (427)
+...
T Consensus 104 l~~~ 107 (256)
T PRK14075 104 LKIE 107 (256)
T ss_pred EEEE
Confidence 5543
No 40
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=94.77 E-value=0.38 Score=47.42 Aligned_cols=97 Identities=14% Similarity=0.124 Sum_probs=58.3
Q ss_pred EEEEEcCccCCCChHHHHHHHHHhhccCceEEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHH
Q 014315 84 VLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASW 163 (427)
Q Consensus 84 v~vivNp~SG~~~g~~~~~~~~~~L~~~qv~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGDGTv~~ 163 (427)
+.+|.|+ ...+.++.+.+++.|....+ ++. .++.+.||+.|||||+-.
T Consensus 3 i~Ii~~~---~~~~~~~~~~l~~~l~~~g~-~~~----------------------------~~~~Dlvi~iGGDGT~L~ 50 (265)
T PRK04885 3 VAIISNG---DPKSKRVASKLKKYLKDFGF-ILD----------------------------EKNPDIVISVGGDGTLLS 50 (265)
T ss_pred EEEEeCC---CHHHHHHHHHHHHHHHHcCC-ccC----------------------------CcCCCEEEEECCcHHHHH
Confidence 6667663 34566777777776654322 110 012478999999999998
Q ss_pred HHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEE
Q 014315 164 LLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQID 224 (427)
Q Consensus 164 Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD 224 (427)
.+..+... ...+|+--|.+|+=.=|+ .+ +.+++.++++.+.+++.....
T Consensus 51 a~~~~~~~--~~~iPilGIN~G~lGFL~---~~-------~~~~~~~~l~~i~~g~y~i~~ 99 (265)
T PRK04885 51 AFHRYENQ--LDKVRFVGVHTGHLGFYT---DW-------RPFEVDKLVIALAKDPGQVVS 99 (265)
T ss_pred HHHHhccc--CCCCeEEEEeCCCceecc---cC-------CHHHHHHHHHHHHcCCceEEE
Confidence 88876531 024554446666522122 12 224688899999998754333
No 41
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=94.56 E-value=0.35 Score=52.71 Aligned_cols=59 Identities=19% Similarity=0.363 Sum_probs=42.0
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeE
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEM 221 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~ 221 (427)
.+.||+.|||||+-.++..+.. ..+||-=|-+|+ ||.=.. ...+++.++|+.+.+++..
T Consensus 349 ~dlvi~lGGDGT~L~aa~~~~~----~~~PilGin~G~-------lGFL~~---~~~~~~~~~l~~~~~g~~~ 407 (569)
T PRK14076 349 ISHIISIGGDGTVLRASKLVNG----EEIPIICINMGT-------VGFLTE---FSKEEIFKAIDSIISGEYE 407 (569)
T ss_pred CCEEEEECCcHHHHHHHHHhcC----CCCCEEEEcCCC-------CCcCcc---cCHHHHHHHHHHHHcCCce
Confidence 4789999999999999887654 245555578887 443221 1235788899999998754
No 42
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=93.82 E-value=0.53 Score=46.57 Aligned_cols=114 Identities=19% Similarity=0.195 Sum_probs=60.9
Q ss_pred cEEEEEcCccCCCChHHHHHHHHHhhccCce-EEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHH
Q 014315 83 PVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTA 161 (427)
Q Consensus 83 ~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv-~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGDGTv 161 (427)
++.+++|+.. ..+.+++..+.+.|. ..+ +.+.. .....+. . ..... .+ .+.+.||+.|||||+
T Consensus 2 ~i~iv~~~~~--~~~~~~~~~i~~~l~-~g~~~~~~~-~~~~~~~-----~-----~~~~~-~~-~~~D~vi~lGGDGT~ 65 (271)
T PRK01185 2 KVAFVIRKDC--KRCIKIAKSIIELLP-PDWEIIYEM-EAAKALG-----M-----DGLDI-EE-INADVIITIGGDGTI 65 (271)
T ss_pred EEEEEecCCC--HHHHHHHHHHHHHHh-cCCEEEEec-hhhhhcC-----c-----ccCcc-cc-cCCCEEEEEcCcHHH
Confidence 3778888744 456677777777663 222 11211 1111100 0 00000 00 135789999999998
Q ss_pred HHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEe
Q 014315 162 SWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 229 (427)
Q Consensus 162 ~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~ 229 (427)
-.++..+. .|.+| |-+|+ ||.-.. ...+++.++|+++.+++..--.+..+.
T Consensus 66 L~a~~~~~------~PilG-IN~G~-------lGFL~~---~~~~~~~~~l~~i~~g~~~i~~r~~L~ 116 (271)
T PRK01185 66 LRTLQRAK------GPILG-INMGG-------LGFLTE---IEIDEVGSAIKKLIRGEYFIDERMKLK 116 (271)
T ss_pred HHHHHHcC------CCEEE-EECCC-------CccCcc---cCHHHHHHHHHHHHcCCcEEEEeeEEE
Confidence 76655431 24455 46765 233221 123578889999999876444444443
No 43
>PLN02727 NAD kinase
Probab=93.21 E-value=0.69 Score=52.55 Aligned_cols=125 Identities=15% Similarity=0.145 Sum_probs=66.8
Q ss_pred cCCCCCCcEEEEEcCccCCCChHHHHHHHHHhhccC-ce-EEeeccCchhHHHHHHHHHHHhhh-ccchhhhhh-ccCcE
Q 014315 76 SSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN-QV-IDLGEKAPDKVLHQLYVTLEKFKA-AGDVFASEI-EKRLR 151 (427)
Q Consensus 76 ~~~~~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~-qv-~dl~~~~p~~~l~~~~~~l~~l~~-~gd~~a~~~-~~~~~ 151 (427)
.-..|.+.|+||.++.. .....+..+.+.|... .+ +.+.. ...+.+... ..+..... .... ..+. ...+.
T Consensus 673 ~W~~p~rtVgIV~K~~~---ea~~~~~eL~~~L~~~~gi~V~VE~-~~a~~l~~~-~~~~~~~~~~~~~-~~el~~~~DL 746 (986)
T PLN02727 673 MWKSTPKTVLLLKKLGQ---ELMEEAKEVASFLYHQEKMNVLVEP-DVHDIFARI-PGFGFVQTFYSQD-TSDLHERVDF 746 (986)
T ss_pred ecCCCCCEEEEEcCCcH---HHHHHHHHHHHHHHhCCCeEEEEec-chHHHhhcc-ccccccceecccc-hhhcccCCCE
Confidence 33456788999999876 4556666677766543 22 11221 111111000 00000000 0000 0011 23578
Q ss_pred EEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCe
Q 014315 152 LIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKE 220 (427)
Q Consensus 152 IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~ 220 (427)
||+.|||||+-.++..+.. ..+||-=|-+|+ ||.=.. .+.+++.+.|++|.++..
T Consensus 747 VIvLGGDGTlLrAar~~~~----~~iPILGINlGr-------LGFLTd---i~~ee~~~~L~~Il~G~y 801 (986)
T PLN02727 747 VACLGGDGVILHASNLFRG----AVPPVVSFNLGS-------LGFLTS---HYFEDFRQDLRQVIHGNN 801 (986)
T ss_pred EEEECCcHHHHHHHHHhcC----CCCCEEEEeCCC-------cccccc---CCHHHHHHHHHHHHcCCc
Confidence 9999999999999887754 345655577774 443221 123567888999888764
No 44
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=92.18 E-value=0.97 Score=44.75 Aligned_cols=60 Identities=22% Similarity=0.287 Sum_probs=38.0
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHc-CCeE
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKN-AKEM 221 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~-a~~~ 221 (427)
..+.||+.|||||+-.++..+.. ..+||--|-+|+ ||.=.. ...+++.+.++.+.+ ++..
T Consensus 42 ~~d~vi~iGGDGT~L~aa~~~~~----~~~PilgIn~G~-------lGFL~~---~~~~~~~~~l~~~~~~g~~~ 102 (272)
T PRK02231 42 RAQLAIVIGGDGNMLGRARVLAK----YDIPLIGINRGN-------LGFLTD---IDPKNAYEQLEACLERGEFF 102 (272)
T ss_pred CCCEEEEECCcHHHHHHHHHhcc----CCCcEEEEeCCC-------Cccccc---CCHHHHHHHHHHHHhcCCce
Confidence 35789999999999988887654 234533357776 443221 122456667777776 6543
No 45
>PLN02929 NADH kinase
Probab=91.97 E-value=1 Score=45.28 Aligned_cols=66 Identities=21% Similarity=0.158 Sum_probs=43.7
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCC---------cch--hhhcCCCCCCCCCchHHHHHHHHHHH
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTG---------NNI--PFSFGWGKKNPNTDQQAVLSFLEQVK 216 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTG---------NDf--AR~LGw~~~~~~~~~~~~~~~l~~i~ 216 (427)
..+.||++|||||+-.++..+ . ..+||-=|-.|+. |.| .|.+|.=.. ...++++++|+.+.
T Consensus 64 ~~Dlvi~lGGDGT~L~aa~~~-~----~~iPvlGIN~Gp~~~~~~~~~~~~~~~~r~lGfL~~---~~~~~~~~~L~~il 135 (301)
T PLN02929 64 DVDLVVAVGGDGTLLQASHFL-D----DSIPVLGVNSDPTQKDEVEEYSDEFDARRSTGHLCA---ATAEDFEQVLDDVL 135 (301)
T ss_pred CCCEEEEECCcHHHHHHHHHc-C----CCCcEEEEECCCcccccccccccccccccCcccccc---CCHHHHHHHHHHHH
Confidence 457899999999998888776 3 2345433566641 222 356665432 23457889999999
Q ss_pred cCCeE
Q 014315 217 NAKEM 221 (427)
Q Consensus 217 ~a~~~ 221 (427)
+++..
T Consensus 136 ~g~~~ 140 (301)
T PLN02929 136 FGRLK 140 (301)
T ss_pred cCCce
Confidence 98754
No 46
>PF10254 Pacs-1: PACS-1 cytosolic sorting protein; InterPro: IPR019381 PACS-1 is a cytosolic sorting protein that directs the localisation of membrane proteins in the trans-Golgi network (TGN)/endosomal system. PACS-1 connects the clathrin adaptor AP-1 to acidic cluster sorting motifs contained in the cytoplasmic domain of cargo proteins such as furin, the cation-independent mannose-6-phosphate receptor and in viral proteins such as human immunodeficiency virus type 1 Nef [].
Probab=90.00 E-value=1.4 Score=45.96 Aligned_cols=48 Identities=25% Similarity=0.375 Sum_probs=38.4
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcC---CCC---CCCCEEEEeCCCCcchhhhcCC
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSDL---KLP---HSPPVATVPLGTGNNIPFSFGW 196 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~~---~~~---~~~plgiIPlGTGNDfAR~LGw 196 (427)
...+|+|+|||--++.||....+. +.. ....+-+||+|+ |.+||.||-
T Consensus 75 ~~vKV~v~G~~~y~~~VLr~yVE~Ls~K~~dWl~~~rFlvIPlGs-~~varyLgs 128 (414)
T PF10254_consen 75 PPVKVAVAGGQSYLSAVLRAYVEQLSHKPPDWLNYLRFLVIPLGS-HPVARYLGS 128 (414)
T ss_pred CceEEEEEccHHHHHHHHHHHHHHhccCCcccccceeEEEecCCC-CHHHHHHhc
Confidence 467899999999999999987653 111 235588999999 999999984
No 47
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed
Probab=89.14 E-value=0.56 Score=45.78 Aligned_cols=58 Identities=17% Similarity=0.247 Sum_probs=35.4
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcC
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNA 218 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a 218 (427)
+.+.||++|||||+-.++..... ..+||--|-+|+ ||.=.. ....+++.+.|+.+...
T Consensus 25 ~~Dlvi~iGGDGTlL~a~~~~~~----~~~PvlGIN~G~-------lGFL~~--~~~~~e~~~~l~~~~~~ 82 (246)
T PRK04761 25 EADVIVALGGDGFMLQTLHRYMN----SGKPVYGMNRGS-------VGFLMN--EYSEDDLLERIAAAEPT 82 (246)
T ss_pred cCCEEEEECCCHHHHHHHHHhcC----CCCeEEEEeCCC-------CCcccC--CCCHHHHHHHHHHhhcC
Confidence 46789999999999988887654 245544466665 332210 01123456666666554
No 48
>cd08197 DOIS 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics. 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics. 2-Deoxystreptamine (DOS)-containing aminoglycoside antibiotics includes neomycin, kanamycin, gentamicin, and ribostamycin. They are important antibacterial agents. DOIS is a homologue of the dehydroquinate synthase which catalyzes the cyclization of 3-deoxy-D-arabino-heputulosonate-7-phosphate to dehydroquinate (DHQ) in the shikimate pathway.
Probab=86.28 E-value=3.2 Score=42.59 Aligned_cols=39 Identities=18% Similarity=0.340 Sum_probs=27.4
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeC--CCCcc
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTGNN 189 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPl--GTGND 189 (427)
.+.||++|| |++..+...+...- ...+|+..||. ||+.|
T Consensus 85 ~~~IIAvGG-Gsv~D~ak~~A~~~-~rgip~I~IPTTlla~~d 125 (355)
T cd08197 85 RSVIVALGG-GVVGNIAGLLAALL-FRGIRLVHIPTTLLAQSD 125 (355)
T ss_pred CcEEEEECC-cHHHHHHHHHHHHh-ccCCCEEEecCccccccc
Confidence 346777776 89998887765321 13578999998 66666
No 49
>cd08180 PDD 1,3-propanediol dehydrogenase (PPD) catalyzes the reduction of 3-hydroxypropionaldehyde (3-HPA) to 1,3-propanediol in glycerol metabolism. 1,3-propanediol dehydrogenase (PPD) plays a role in glycerol metabolism of some bacteria in anaerobic conditions. In this degradation pathway, glycerol is converted in a two-step process to 1,3-propanediol (1,3-PD) which is then excreted into the extracellular medium. The first reaction involves the transformation of glycerol into 3-hydroxypropionaldehyde (3-HPA) by a coenzyme B-12-dependent dehydratase. The second reaction involves the dismutation of the 3-hydroxypropionaldehyde (3-HPA) to 1,3-propanediol by the NADH-linked 1,3-propanediol dehydrogenase (PPD). The enzyme require iron ion for its function. Because many genes in this pathway are present in the pdu (propanediol utilisation) operon, they are also named pdu genes. PPD is a member of the iron-containing alcohol dehydrogenase superfamily. The PPD structure has a dehydroquinat
Probab=84.93 E-value=7.8 Score=39.14 Aligned_cols=44 Identities=25% Similarity=0.327 Sum_probs=28.0
Q ss_pred cCcEEEEEcCchHHHHHHHHHh---cC-CCCCCCCEEEEeC--CCCcchhh
Q 014315 148 KRLRLIVAGGDGTASWLLGVVS---DL-KLPHSPPVATVPL--GTGNNIPF 192 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~---~~-~~~~~~plgiIPl--GTGNDfAR 192 (427)
+.+.||++|| |++..+...+. .. .....+|+..||. |||--.+.
T Consensus 78 ~~d~IiaiGG-Gs~~D~aKa~a~~~~~~~~~~~~p~i~VPTtagtgse~t~ 127 (332)
T cd08180 78 KPDIVIALGG-GSAIDAAKAIIYFAKKLGKKKKPLFIAIPTTSGTGSEVTS 127 (332)
T ss_pred CCCEEEEECC-chHHHHHHHHHHHHhCCCCCCCCCEEEeCCCCcchHhhCC
Confidence 4678999998 66666666442 11 1124579999996 67655544
No 50
>COG0061 nadF NAD kinase [Coenzyme metabolism]
Probab=84.56 E-value=5.7 Score=39.41 Aligned_cols=71 Identities=20% Similarity=0.273 Sum_probs=47.3
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEE
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWH 227 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~ 227 (427)
..+.|++.|||||+-..+...... .+|+-=|=.|+ +-.-..|. .++++++++.+.+++.+...+..
T Consensus 55 ~~d~ivvlGGDGtlL~~~~~~~~~----~~pilgin~G~---lGFLt~~~-------~~~~~~~~~~~~~~~~~~~~r~~ 120 (281)
T COG0061 55 KADLIVVLGGDGTLLRAARLLARL----DIPVLGINLGH---LGFLTDFE-------PDELEKALDALLEGEYRIEERLL 120 (281)
T ss_pred CceEEEEeCCcHHHHHHHHHhccC----CCCEEEEeCCC---cccccccC-------HHHHHHHHHHHhcCceEEEEeEE
Confidence 467899999999999998887652 34444444442 22222222 34788899999887777666666
Q ss_pred Eeeee
Q 014315 228 ILMRM 232 (427)
Q Consensus 228 V~~~~ 232 (427)
+....
T Consensus 121 l~~~v 125 (281)
T COG0061 121 LEVSV 125 (281)
T ss_pred EEEEE
Confidence 66544
No 51
>cd08176 LPO Lactadehyde:propanediol oxidoreductase (LPO) catalyzes the interconversion between L-lactaldehyde and L-1,2-propanediol in Escherichia coli and other enterobacteria. Lactadehyde:propanediol oxidoreductase (LPO) is a member of the group III iron-activated dehydrogenases which catalyze the interconversion between L-lactaldehyde and L-1,2-propanediol in Escherichia coli and other enterobacteria. L-Fucose and L-rhamnose is used by Escherichia coli through an inducible pathway mediated by the fucose regulon comprising four linked oeprons fucO, fucA, fucPIK, and fucR. The fucA-encoded aldolase catalyzes the formation of dihydroxyacetone phosphate and L-lactaldehyde. Under anaerobic conditions, with NADH as a cofactor, lactaldehyde is converted by a fucO-encoded Lactadehyde:propanediol oxidoreductase (LPO) to L-1,2-propanediol, which is excreted as a fermentation product. In mutant strains, E. coli adapted to grow on L-1,2-propanediol, FucO catalyzes the oxidation of the polyol to
Probab=84.00 E-value=5.5 Score=41.01 Aligned_cols=49 Identities=14% Similarity=0.186 Sum_probs=31.9
Q ss_pred cCcEEEEEcCchHHHHHHHHHhc---C------------CCCCCCCEEEEeC--CCCcchhhhcCCC
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSD---L------------KLPHSPPVATVPL--GTGNNIPFSFGWG 197 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~---~------------~~~~~~plgiIPl--GTGNDfAR~LGw~ 197 (427)
+.+.||++|| |++..+.-.+.- . .....+|+..||. |||-...+.--+.
T Consensus 85 ~~D~IIavGG-GS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~P~i~IPTtagTgSe~t~~avi~ 150 (377)
T cd08176 85 GCDFIISIGG-GSPHDCAKAIGIVATNGGDIRDYEGVAKSKKPAVPIVAINTTAGTASEVTINYVIT 150 (377)
T ss_pred CCCEEEEeCC-cHHHHHHHHHHHHHhCCCCHHHHhCcCccCCCCCCEEEeCCCCcchhccCCcEEEE
Confidence 4578998988 677666654421 0 0124578999997 8888776655543
No 52
>TIGR03405 Phn_Fe-ADH phosphonate metabolism-associated iron-containing alcohol dehydrogenase. 2-hydroxyethylphosphonate (2-HEP), the presumed product of the reaction of Pald with an alcohol dehydrogenase, is a biologically novel but reasonable analog of 2-AEP and may be a constituent of as-yet undescribed natural products. In the case of Azoarcus, downstream of the dehydrogenase is a CDP-glycerol:glycerophosphate transferase homolog that may indicate the existence of a pathway for 2-HEP-derived phosphonolipid biosynthesis.
Probab=83.11 E-value=7.7 Score=39.65 Aligned_cols=103 Identities=18% Similarity=0.137 Sum_probs=52.2
Q ss_pred CcEEEEEcCccCCCChHHHHHHHHHhhccCceEEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHH
Q 014315 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTA 161 (427)
Q Consensus 82 ~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGDGTv 161 (427)
++++|+..+... ...+++.+...|....++......|..-++.+.+..+.+.+. ..+.+.||++|| |++
T Consensus 24 ~r~lvVtd~~~~---~~g~~~~v~~~L~~~~~~~~~~v~~~pt~~~v~~~~~~~~~~-------~~~~D~IIaiGG-GSv 92 (355)
T TIGR03405 24 RRVVVVTFPEAR---ALGLARRLEALLGGRLAALIDDVAPNPDVAQLDGLYARLWGD-------EGACDLVIALGG-GSV 92 (355)
T ss_pred CeEEEEECcchh---hcchHHHHHHHhccCcEEEeCCCCCCcCHHHHHHHHHHHHhc-------CCCCCEEEEeCC-ccH
Confidence 678888765432 123566666666543332222212222222222222111110 012578999988 777
Q ss_pred HHHHHHHhcC---C----------------CCCCCCEEEEeC--CCCcchhhhcC
Q 014315 162 SWLLGVVSDL---K----------------LPHSPPVATVPL--GTGNNIPFSFG 195 (427)
Q Consensus 162 ~~Vln~l~~~---~----------------~~~~~plgiIPl--GTGNDfAR~LG 195 (427)
..+...+.-. . ....+|+..||. |||-...+.--
T Consensus 93 iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~P~IaVPTTagTGSE~t~~av 147 (355)
T TIGR03405 93 IDTAKVLAVGLRRGEFDLLLQLLRNGRDFAPTARLPLVAIPTTAGTGSEVTPWAT 147 (355)
T ss_pred HHHHHHHHHHHhCCCcccHHHHHhcCCccCCCCCCCEEEEcCCCcchhhhcCeEE
Confidence 7666544211 0 113578999997 78877766543
No 53
>cd08169 DHQ-like Dehydroquinate synthase-like which includes dehydroquinate synthase, 2-deoxy-scyllo-inosose synthase, and 2-epi-5-epi-valiolone synthase. Dehydroquinate synthase-like. This group contains dehydroquinate synthase, 2-deoxy-scyllo-inosose synthase, and 2-epi-5-epi-valiolone synthase. They exhibit the dehydroquinate synthase structural fold. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds. 2-deoxy-scyllo-inosose synthase (DOIS) catalyzes carbocycle formation from D-glucose-6-phosphate to 2-deoxy-scyllo-inosose through a multistep reaction in the biosynthesis of aminoglycoside antibiotics. 2-Deoxystreptamine (DOS)-containing aminoglycoside antibiotics includes ne
Probab=81.35 E-value=7.5 Score=39.67 Aligned_cols=97 Identities=15% Similarity=0.183 Sum_probs=50.1
Q ss_pred CcEEEEEcCccCCCChHHHHHHHHHhhcc---CceEEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 014315 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNE---NQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 158 (427)
Q Consensus 82 ~~v~vivNp~SG~~~g~~~~~~~~~~L~~---~qv~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGD 158 (427)
++++|+..+..-. .+.+.+.+.|.. ..++.+....+.+.++.+.+.++.+.+.+ ..+.+.||++||
T Consensus 24 ~k~livtd~~v~~----~~~~~v~~~L~~~~~~~~~~~~~~e~~k~~~~v~~~~~~~~~~~------~~r~d~IIaiGG- 92 (344)
T cd08169 24 DQYFFISDSGVAD----LIAHYIAEYLSKILPVHILVIEGGEEYKTFETVTRILERAIALG------ANRRTAIVAVGG- 92 (344)
T ss_pred CeEEEEECccHHH----HHHHHHHHHHHhhcCceEEEeCCCCCCCCHHHHHHHHHHHHHcC------CCCCcEEEEECC-
Confidence 5778887754432 355556665533 23333332222222222222222222111 123567888876
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEEeC--CCCcch
Q 014315 159 GTASWLLGVVSDLKLPHSPPVATVPL--GTGNNI 190 (427)
Q Consensus 159 GTv~~Vln~l~~~~~~~~~plgiIPl--GTGNDf 190 (427)
|++..+...+...- ...+|+-.||. ++++|-
T Consensus 93 Gsv~D~ak~vA~~~-~rgip~i~VPTTlla~~ds 125 (344)
T cd08169 93 GATGDVAGFVASTL-FRGIAFIRVPTTLLAQSDS 125 (344)
T ss_pred cHHHHHHHHHHHHh-ccCCcEEEecCCccccccc
Confidence 88888887664321 13678999997 555553
No 54
>cd08179 NADPH_BDH NADPH-dependent butanol dehydrogenase involved in the butanol and ethanol formation pathway in bacteria. NADPH-dependent butanol dehydrogenase (BDH) is involved in the butanol and ethanol formation pathway of some bacteria. The fermentation process is characterized by an acid producing growth phase, followed by a solvent producing phase. The latter phase is associated with the induction of solventogenic enzymes such as butanol dehydrogenase. The activity of the enzymes require NADPH as cofactor, as well as divalent ions zinc or iron. This family is a member of the iron-containing alcohol dehydrogenase superfamily. Protein structure has a dehydroquinate synthase-like fold.
Probab=80.34 E-value=7.4 Score=40.04 Aligned_cols=47 Identities=17% Similarity=0.164 Sum_probs=28.5
Q ss_pred cCcEEEEEcCchHHHHHHHHHhc---C------------C---CCCCCCEEEEeC--CCCcchhhhcC
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSD---L------------K---LPHSPPVATVPL--GTGNNIPFSFG 195 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~---~------------~---~~~~~plgiIPl--GTGNDfAR~LG 195 (427)
+.+.||++|| |++..+.-.+.- . + ....+|+..||. |||--..+.--
T Consensus 81 ~~D~IIavGG-GSviD~AK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~p~iaIPTtagTGSE~t~~av 147 (375)
T cd08179 81 EPDWIIALGG-GSPIDAAKAMWIFYEYPELTFEDIVKPFTLPELRNKARFCAIPSTSGTATEVTAFSV 147 (375)
T ss_pred CCCEEEEeCC-ccHHHHHHHHHHHHhCCCcCHHHHhccccccccCCCCCEEEeCCCCchhHhhCCeEE
Confidence 4578999988 666655544321 0 0 113468999997 77776655443
No 55
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=77.68 E-value=9.9 Score=34.36 Aligned_cols=81 Identities=14% Similarity=0.233 Sum_probs=40.7
Q ss_pred CCCChHHHHHHHHHhhccCce-EEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC
Q 014315 93 GGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL 171 (427)
Q Consensus 93 G~~~g~~~~~~~~~~L~~~qv-~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGDGTv~~Vln~l~~~ 171 (427)
|+..-..+.++.+..|....+ |++.-.......+++.+.++.+... .-...|.++|+++-+--|+.++..
T Consensus 8 gs~SD~~~~~~a~~~L~~~gi~~~~~V~saHR~p~~l~~~~~~~~~~--------~~~viIa~AG~~a~Lpgvva~~t~- 78 (150)
T PF00731_consen 8 GSTSDLPIAEEAAKTLEEFGIPYEVRVASAHRTPERLLEFVKEYEAR--------GADVIIAVAGMSAALPGVVASLTT- 78 (150)
T ss_dssp SSGGGHHHHHHHHHHHHHTT-EEEEEE--TTTSHHHHHHHHHHTTTT--------TESEEEEEEESS--HHHHHHHHSS-
T ss_pred CCHHHHHHHHHHHHHHHHcCCCEEEEEEeccCCHHHHHHHHHHhccC--------CCEEEEEECCCcccchhhheeccC-
Confidence 433344566666666666543 5554333222222222222211110 113568899999999999999863
Q ss_pred CCCCCCCEEEEeCCCC
Q 014315 172 KLPHSPPVATVPLGTG 187 (427)
Q Consensus 172 ~~~~~~plgiIPlGTG 187 (427)
.|.||+ |.-++
T Consensus 79 ----~PVIgv-P~~~~ 89 (150)
T PF00731_consen 79 ----LPVIGV-PVSSG 89 (150)
T ss_dssp ----S-EEEE-EE-ST
T ss_pred ----CCEEEe-ecCcc
Confidence 466776 76654
No 56
>cd08181 PPD-like 1,3-propanediol dehydrogenase-like (PPD). 1,3-propanediol dehydrogenase-like (PPD). This family is a member of the iron-containing alcohol dehydrogenase superfamily, and exhibits a dehydroquinate synthase-like fold. Protein sequence similarity search and other biochemical evidences suggest that they are close to the iron-containing 1,3-propanediol dehydrogenase (EC 1.1.1.202). 1,3-propanediol dehydrogenase catalyzes the oxidation of propane-1,3-diol to 3-hydroxypropanal with the simultaneous reduction of NADP+ to NADPH. The protein structure of Thermotoga maritima TM0920 gene contains one NADP+ and one iron ion.
Probab=76.95 E-value=15 Score=37.44 Aligned_cols=48 Identities=21% Similarity=0.227 Sum_probs=31.8
Q ss_pred cCcEEEEEcCchHHHHHHHHHhc-------------CC-CCCCCCEEEEeC--CCCcchhhhcCC
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSD-------------LK-LPHSPPVATVPL--GTGNNIPFSFGW 196 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~-------------~~-~~~~~plgiIPl--GTGNDfAR~LGw 196 (427)
+.+.||++|| |++..+...+.- .. ....+|+..||. |||-..++.--+
T Consensus 83 ~~D~IIavGG-GSviD~aK~ia~~~~~~~~~~~~~~~~~~~~~~P~i~VPTtagTGsE~t~~avi 146 (357)
T cd08181 83 NADFVIGIGG-GSPLDAAKAIAVLIKNPDLKVELYFRSKYLKALPVVAIPTTAGTGSEVTQYSVL 146 (357)
T ss_pred CCCEEEEeCC-chHHHHHHHHHHHHhCCCcHHHHhcccccCCCCCEEEEeCCCcchhhhCCeEEE
Confidence 4578999988 777777665421 00 123578999997 888877774433
No 57
>PRK09860 putative alcohol dehydrogenase; Provisional
Probab=76.81 E-value=18 Score=37.51 Aligned_cols=126 Identities=13% Similarity=0.128 Sum_probs=62.0
Q ss_pred cccccCceeecCCcc-c---ccCCCCCCcEEEEEcCccCCCChHHHHHHHHHhhccCc--eEEeeccCchhHHHHHHHHH
Q 014315 59 NYYIPNYILVSGSEV-Q---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--VIDLGEKAPDKVLHQLYVTL 132 (427)
Q Consensus 59 ~~~ip~~~~~~~~~~-~---~~~~~~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~q--v~dl~~~~p~~~l~~~~~~l 132 (427)
.|.+|++++...... . .......++++|+.-+.. ....+++.+++.|.... +.......|..-.+.+.+..
T Consensus 5 ~~~~p~~i~~G~g~~~~l~~~~~~~g~~~~livt~~~~---~~~g~~~~v~~~L~~~~i~~~~f~~v~~np~~~~v~~~~ 81 (383)
T PRK09860 5 TFFIPSVNVIGADSLTDAMNMMADYGFTRTLIVTDNML---TKLGMAGDVQKALEERNIFSVIYDGTQPNPTTENVAAGL 81 (383)
T ss_pred ccccCCeEEECcCHHHHHHHHHHhcCCCEEEEEcCcch---hhCccHHHHHHHHHHcCCeEEEeCCCCCCcCHHHHHHHH
Confidence 466788877654321 1 111222356776654311 12234556666665432 22222222222222222322
Q ss_pred HHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhc---C----------C--CCCCCCEEEEeC--CCCcchhhhcC
Q 014315 133 EKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSD---L----------K--LPHSPPVATVPL--GTGNNIPFSFG 195 (427)
Q Consensus 133 ~~l~~~gd~~a~~~~~~~~IIv~GGDGTv~~Vln~l~~---~----------~--~~~~~plgiIPl--GTGNDfAR~LG 195 (427)
+..+ + .+.+.||++|| |++..+.-.+.- . . ....+|+..||. |||-...+.--
T Consensus 82 ~~~~--------~-~~~D~IiaiGG-GS~iD~AK~ia~~~~~~~~~~~~~~~~~~~~~~~p~iaIPTTagTGSE~t~~av 151 (383)
T PRK09860 82 KLLK--------E-NNCDSVISLGG-GSPHDCAKGIALVAANGGDIRDYEGVDRSAKPQLPMIAINTTAGTASEMTRFCI 151 (383)
T ss_pred HHHH--------H-cCCCEEEEeCC-chHHHHHHHHHHHHHCCCCHHHHhCcCccCCCCCCEEEEeCCCcchhccCceEE
Confidence 2111 1 24678999998 555554444321 0 0 124578999997 89888777665
Q ss_pred CC
Q 014315 196 WG 197 (427)
Q Consensus 196 w~ 197 (427)
+.
T Consensus 152 i~ 153 (383)
T PRK09860 152 IT 153 (383)
T ss_pred EE
Confidence 53
No 58
>PRK00002 aroB 3-dehydroquinate synthase; Reviewed
Probab=75.87 E-value=12 Score=38.28 Aligned_cols=92 Identities=22% Similarity=0.248 Sum_probs=48.3
Q ss_pred CCcEEEEEcCccCCCChHHHHHHHHHhhccC----ceEEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEc
Q 014315 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNEN----QVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAG 156 (427)
Q Consensus 81 ~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~----qv~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~G 156 (427)
.++++|+..+.... .+.+.+.+.|... .++.+....+...++.+.+.++.+.+.+ ..+.+.||++|
T Consensus 31 ~~~~livtd~~~~~----~~~~~v~~~L~~~gi~~~~~~~~~~e~~~~~~~v~~~~~~~~~~~------~~r~d~IIavG 100 (358)
T PRK00002 31 GKKVAIVTDETVAP----LYLEKLRASLEAAGFEVDVVVLPDGEQYKSLETLEKIYDALLEAG------LDRSDTLIALG 100 (358)
T ss_pred CCeEEEEECCchHH----HHHHHHHHHHHhcCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcC------CCCCCEEEEEc
Confidence 36788888655532 3666666666532 2232332222222222222222221110 12346788887
Q ss_pred CchHHHHHHHHHhcCCCCCCCCEEEEeC
Q 014315 157 GDGTASWLLGVVSDLKLPHSPPVATVPL 184 (427)
Q Consensus 157 GDGTv~~Vln~l~~~~~~~~~plgiIPl 184 (427)
| |++..+...+...- ...+|+..||.
T Consensus 101 G-Gsv~D~aK~iA~~~-~~gip~i~IPT 126 (358)
T PRK00002 101 G-GVIGDLAGFAAATY-MRGIRFIQVPT 126 (358)
T ss_pred C-cHHHHHHHHHHHHh-cCCCCEEEcCc
Confidence 7 88888887765211 14678999997
No 59
>cd08195 DHQS Dehydroquinate synthase (DHQS) catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway, which involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds, is found in bacteria, microbial eukaryotes, and plants, but not in mammals. Therefore, enzymes of this pathway are attractive targets for the development of non-toxic antimicrobial compounds, herbicides and anti-parasitic agents. The activity of DHQS requires nicotinamide adenine dinucleotide (NAD) as cofactor. A single active site in DHQS catalyzes five sequential reactions involving alcohol oxidation, phosphate elimination, carbonyl reduction, ring opening, and intramolecular aldol
Probab=75.55 E-value=11 Score=38.26 Aligned_cols=91 Identities=20% Similarity=0.294 Sum_probs=48.7
Q ss_pred CcEEEEEcCccCCCChHHHHHHHHHhhcc----CceEEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 014315 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNE----NQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (427)
Q Consensus 82 ~~v~vivNp~SG~~~g~~~~~~~~~~L~~----~qv~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GG 157 (427)
++++|+..+..-. .+.+.+++.|.. ..++.+....+...++.+.+.++.+.+.+ ..+.+.||++||
T Consensus 25 ~~~livtd~~~~~----~~~~~l~~~L~~~g~~~~~~~~~~~e~~~~~~~v~~~~~~~~~~~------~~r~d~IIaiGG 94 (345)
T cd08195 25 SKILIVTDENVAP----LYLEKLKAALEAAGFEVEVIVIPAGEASKSLETLEKLYDALLEAG------LDRKSLIIALGG 94 (345)
T ss_pred CeEEEEECCchHH----HHHHHHHHHHHhcCCceEEEEeCCCCCcCCHHHHHHHHHHHHHcC------CCCCCeEEEECC
Confidence 6788888766543 355666666643 22333333223322332333332222111 123467888877
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEEeC
Q 014315 158 DGTASWLLGVVSDLKLPHSPPVATVPL 184 (427)
Q Consensus 158 DGTv~~Vln~l~~~~~~~~~plgiIPl 184 (427)
|++..+...+...- ...+|+..||.
T Consensus 95 -Gsv~D~ak~vA~~~-~rgip~i~VPT 119 (345)
T cd08195 95 -GVVGDLAGFVAATY-MRGIDFIQIPT 119 (345)
T ss_pred -hHHHhHHHHHHHHH-hcCCCeEEcch
Confidence 88888887664210 13678999996
No 60
>PRK10624 L-1,2-propanediol oxidoreductase; Provisional
Probab=74.67 E-value=21 Score=36.79 Aligned_cols=48 Identities=21% Similarity=0.324 Sum_probs=30.2
Q ss_pred cCcEEEEEcCchHHHHHHHHHh---cCC--------------CCCCCCEEEEeC--CCCcchhhhcCC
Q 014315 148 KRLRLIVAGGDGTASWLLGVVS---DLK--------------LPHSPPVATVPL--GTGNNIPFSFGW 196 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~---~~~--------------~~~~~plgiIPl--GTGNDfAR~LGw 196 (427)
+.+.||++|| |++..+.-.+. ... ....+|+..||. |||-...+..-+
T Consensus 87 ~~D~IIaiGG-GS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTTagTGse~t~~avi 153 (382)
T PRK10624 87 GADYLIAIGG-GSPQDTCKAIGIISNNPEFADVRSLEGVAPTKKPSVPIIAIPTTAGTAAEVTINYVI 153 (382)
T ss_pred CCCEEEEeCC-hHHHHHHHHHHHHHHCCCCCCHHHHhCcCcccCCCCCEEEECCCCchhhhhcceeee
Confidence 4578888888 67776665332 100 113578999996 777766665544
No 61
>cd08172 GlyDH-like1 Glycerol dehydrogenases-like. Glycerol dehydrogenases-like. The proteins in this family have not been characterized, but they show sequence homology with glycerol dehydrogenase. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway. In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site.
Probab=74.18 E-value=22 Score=36.17 Aligned_cols=92 Identities=18% Similarity=0.135 Sum_probs=53.5
Q ss_pred CcEEEEEcCccCCCChHHHHHHHHHhhccCce--EEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 014315 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQV--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 159 (427)
Q Consensus 82 ~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv--~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGDG 159 (427)
++++|+..+.+ ...+.+.+++.|....+ .......+.+.++.+...+ .+ .+.+.||++|| |
T Consensus 24 ~~~liv~d~~~----~~~~~~~l~~~L~~~~~~~~~~~~~p~~~~v~~~~~~~---~~---------~~~D~iIavGG-G 86 (347)
T cd08172 24 KRPLIVTGPRS----WAAAKPYLPESLAAGEAFVLRYDGECSEENIERLAAQA---KE---------NGADVIIGIGG-G 86 (347)
T ss_pred CeEEEEECHHH----HHHHHHHHHHHHhcCeEEEEEeCCCCCHHHHHHHHHHH---Hh---------cCCCEEEEeCC-c
Confidence 67888887766 33567777777743322 1112222223332222221 11 13578888888 8
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEEeC--CCCcchhhh
Q 014315 160 TASWLLGVVSDLKLPHSPPVATVPL--GTGNNIPFS 193 (427)
Q Consensus 160 Tv~~Vln~l~~~~~~~~~plgiIPl--GTGNDfAR~ 193 (427)
++..+...+... ..+|+..||. |||-..++.
T Consensus 87 s~~D~aK~ia~~---~~~p~i~VPTT~gtgse~t~~ 119 (347)
T cd08172 87 KVLDTAKAVADR---LGVPVITVPTLAATCAAWTPL 119 (347)
T ss_pred HHHHHHHHHHHH---hCCCEEEecCccccCccccee
Confidence 888888877542 2578999996 666666643
No 62
>cd08186 Fe-ADH8 Iron-containing alcohol dehydrogenase. Type III Iron-containing alcohol dehydrogenases (ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. The ADH of hyperthermophilic archaeon Thermococcus hydrothermalis oxidizes a series of primary aliphatic and aromatic alcohols preferentially from C2 to C8 but is also active towards methanol and glycerol and stereospecific for monoterpenes. It was suggested that the type III ADHs in microorganisms are involved in acetaldehyde detoxication rather than in alcohol turnover.
Probab=74.02 E-value=12 Score=38.54 Aligned_cols=48 Identities=23% Similarity=0.219 Sum_probs=31.6
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcC--------------C--CCCCCCEEEEeC--CCCcchhhhcCC
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSDL--------------K--LPHSPPVATVPL--GTGNNIPFSFGW 196 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~~--------------~--~~~~~plgiIPl--GTGNDfAR~LGw 196 (427)
+.+.||++|| |++..+...+.-. . ....+|+..||. |||...++.--+
T Consensus 84 ~~D~IIaiGG-GS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~P~iaIPTTagTGSE~t~~avi 149 (383)
T cd08186 84 GAQAVIAIGG-GSPIDSAKSAAILLEHPGKTARDLYEFKFTPEKALPLIAINLTHGTGTEVDRFAVA 149 (383)
T ss_pred CCCEEEEeCC-ccHHHHHHHHHHHHhCCCCcHHHHhCCCcccCCCCCEEEEeCCChhhhhhCCeEEE
Confidence 3578999998 6777666554210 0 013578999998 898877765544
No 63
>cd08551 Fe-ADH iron-containing alcohol dehydrogenases (Fe-ADH)-like. Large metal-containing alcohol dehydrogenases (ADH), known as iron-containing alcohol dehydrogenases. They contain a dehydroquinate synthase-like protein structural fold and mostly contain iron. They are distinct from other alcohol dehydrogenases which contains different protein domains. There are several distinct families of alcohol dehydrogenases: Zinc-containing long-chain alcohol dehydrogenases; insect-type, or short-chain alcohol dehydrogenases; iron-containing alcohol dehydrogenases, and others. The iron-containing family has a Rossmann fold-like topology that resembles the fold of the zinc-dependent alcohol dehydrogenases, but lacks sequence homology, and differs in strand arrangement. ADH catalyzes the reversible oxidation of alcohol to acetaldehyde with the simultaneous reduction of NAD(P)+ to NAD(P)H.
Probab=73.72 E-value=17 Score=37.24 Aligned_cols=48 Identities=21% Similarity=0.261 Sum_probs=29.7
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCC---------------CCCCCCEEEEeC--CCCcchhhhcCC
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSDLK---------------LPHSPPVATVPL--GTGNNIPFSFGW 196 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~~~---------------~~~~~plgiIPl--GTGNDfAR~LGw 196 (427)
+.+.||++|| |++..+.-.+.-.- ....+|+..||. |||--.++...+
T Consensus 80 ~~d~IiaiGG-Gs~~D~AK~va~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTt~gtgse~t~~avi 144 (370)
T cd08551 80 GCDGVIAVGG-GSVLDTAKAIALLATNPGDIWDYEGGKPVIKPALPLIAIPTTAGTGSEVTPFAVI 144 (370)
T ss_pred CCCEEEEeCC-chHHHHHHHHHHHHhCCCcHHHHhCcccccCCCCCEEEecCCCcchhhcCCeEEE
Confidence 3578888888 67776665542110 013578999998 676555554443
No 64
>TIGR02638 lactal_redase lactaldehyde reductase. This clade of genes encoding iron-containing alcohol dehydrogenase (pfam00465) proteins is generally found in apparent operons for the catabolism of rhamnose or fucose. Catabolism of both of these monosaccharides results in lactaldehyde which is reduced by this enzyme to 1,2 propanediol. This protein is alternatively known by the name 1,2 propanediol oxidoreductase. This enzyme is active under anaerobic conditions in E. coli while being inactivated by reactive oxygen species under aerobic conditions. Under aerobic conditions the lactaldehyde product of rhamnose and fucose catabolism is believed to be oxidized to lactate by a separate enzyme, lactaldehyde dehydrogenase.
Probab=73.26 E-value=17 Score=37.51 Aligned_cols=125 Identities=14% Similarity=0.135 Sum_probs=60.2
Q ss_pred cccccCceeecCCcc-c---ccCCCCCCcEEEEEcCccCCCChHHHHHHHHHhhccC--ceEEeeccCchhHHHHHHHHH
Q 014315 59 NYYIPNYILVSGSEV-Q---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QVIDLGEKAPDKVLHQLYVTL 132 (427)
Q Consensus 59 ~~~ip~~~~~~~~~~-~---~~~~~~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~--qv~dl~~~~p~~~l~~~~~~l 132 (427)
+|.+|+.++...... . .......++++|+.-+..-. ..+++.++..|... .+.......+..-++.+.+..
T Consensus 3 ~~~~p~~i~fG~g~l~~l~~~l~~~g~~r~lvvt~~~~~~---~g~~~~v~~~L~~~~i~~~~~~~v~~~p~~~~v~~~~ 79 (379)
T TIGR02638 3 RLILNETSYFGAGAIEDIVDEVKRRGFKKALVVTDKDLIK---FGVADKVTDLLDEAGIAYELFDEVKPNPTITVVKAGV 79 (379)
T ss_pred cccCCCeEEECcCHHHHHHHHHHhcCCCEEEEEcCcchhh---ccchHHHHHHHHHCCCeEEEECCCCCCcCHHHHHHHH
Confidence 467788877654321 1 11122336788877643321 12455555555432 222222222222222222222
Q ss_pred HHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhc---CC--------------CCCCCCEEEEeC--CCCcchhhh
Q 014315 133 EKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSD---LK--------------LPHSPPVATVPL--GTGNNIPFS 193 (427)
Q Consensus 133 ~~l~~~gd~~a~~~~~~~~IIv~GGDGTv~~Vln~l~~---~~--------------~~~~~plgiIPl--GTGNDfAR~ 193 (427)
+.+. + .+.+.||++|| |++..+.-.+.- .. ....+|+..||. |||-...+.
T Consensus 80 ~~~~--------~-~~~D~IiaiGG-GSviD~aKaia~~~~~~~~~~~~~~~~~~~~~~~~~P~i~IPTTagTGse~t~~ 149 (379)
T TIGR02638 80 AAFK--------A-SGADYLIAIGG-GSPIDTAKAIGIISNNPEFADVRSLEGVAPTKKPGVPIIAIPTTAGTAAEVTIN 149 (379)
T ss_pred HHHH--------h-cCCCEEEEeCC-hHHHHHHHHHHHHHhCCCCCCHHHhhCCCccCCCCCCEEEECCCCchhhhhCCE
Confidence 2111 1 24578998988 666666644321 00 113578999997 777666655
Q ss_pred cCC
Q 014315 194 FGW 196 (427)
Q Consensus 194 LGw 196 (427)
.-+
T Consensus 150 avi 152 (379)
T TIGR02638 150 YVI 152 (379)
T ss_pred EEE
Confidence 443
No 65
>cd07766 DHQ_Fe-ADH Dehydroquinate synthase-like (DHQ-like) and iron-containing alcohol dehydrogenases (Fe-ADH). Dehydroquinate synthase-like. This superfamily divides into two subgroups: the dehydroquinate synthase-like, and a large metal-containing alcohol dehydrogenases (ADH), known as iron-containing alcohol dehydrogenases. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds. Dehydroquinate synthase-like group includes dehydroquinate synthase, 2-deoxy-scyllo-inosose synthase, and 2-epi-5-epi-valiolone synthase. The alcohol dehydrogenases in this superfamily contain a dehydroquinate synthase-like protein structural fold and mostly contain iron. They are distinct from other alc
Probab=72.98 E-value=19 Score=36.14 Aligned_cols=38 Identities=29% Similarity=0.389 Sum_probs=26.8
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeC--CCC
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTG 187 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPl--GTG 187 (427)
+.+.||++|| |++..+...+...- ...+|+..||. |||
T Consensus 78 ~~d~IIaiGG-Gs~~D~aK~ia~~~-~~~~p~i~iPTt~~tg 117 (332)
T cd07766 78 EVDAVIAVGG-GSTLDTAKAVAALL-NRGLPIIIVPTTAATG 117 (332)
T ss_pred CcCEEEEeCC-chHHHHHHHHHHHh-cCCCCEEEEeCCCchh
Confidence 4577888887 88888887764421 13689999997 454
No 66
>KOG4180 consensus Predicted kinase [General function prediction only]
Probab=72.44 E-value=2 Score=43.35 Aligned_cols=64 Identities=22% Similarity=0.238 Sum_probs=40.7
Q ss_pred ccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEE--eCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeE
Q 014315 147 EKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATV--PLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEM 221 (427)
Q Consensus 147 ~~~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiI--PlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~ 221 (427)
...+.||-+|||||+-....-+.+ +..|.||+= |.|+--- |-++..||. ++..+|..+..|+..
T Consensus 104 ~waD~VisvGGDGTfL~Aasrv~~---~~~PViGvNtDP~~Seg~----lcL~~~~~~----n~~~al~k~~sgnF~ 169 (395)
T KOG4180|consen 104 RWADMVISVGGDGTFLLAASRVID---DSKPVIGVNTDPTGSEGH----LCLPDKYPS----NPAGALCKLTSGNFE 169 (395)
T ss_pred chhhEEEEecCccceeehhhhhhc---cCCceeeecCCCCcCcce----EeccccCCC----CcHHHHHHHHhccHH
Confidence 345789999999998777664433 245777763 6665433 334554542 456677777777654
No 67
>cd08185 Fe-ADH1 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenases-like (ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase fold and is a member of the iron-containing alcohol dehydrogenase-like family. They are distinct from other alcohol dehydrogenases which contain different protein domains. Proteins of this family have not been characterized. Their specific function is unknown. They are present in bacteria and archaea.
Probab=71.85 E-value=22 Score=36.60 Aligned_cols=49 Identities=14% Similarity=0.094 Sum_probs=31.8
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcC-------------------C-CCCCCCEEEEeC--CCCcchhhhcCCC
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSDL-------------------K-LPHSPPVATVPL--GTGNNIPFSFGWG 197 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~~-------------------~-~~~~~plgiIPl--GTGNDfAR~LGw~ 197 (427)
+.+.||++|| |++..+.-.+.-. . ....+|+..||. |||--.++.--+.
T Consensus 83 ~~D~IiavGG-GS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTtagTGSE~t~~avi~ 153 (380)
T cd08185 83 GCDFVVGLGG-GSSMDTAKAIAFMAANEGDYWDYIFGGTGKGKPPPEKALPIIAITTTAGTGSEADPWAVIT 153 (380)
T ss_pred CCCEEEEeCC-ccHHHHHHHHHHHhhCCCCHHHHhcccccccccCCCCCCCEEEEcCCChhhhccCCeEEEE
Confidence 4678999988 6666666554211 0 113578999995 8888777755543
No 68
>cd08187 BDH Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. The butanol dehydrogenase (BDH) is involved in the final step of the butanol formation pathway in anaerobic micro-organism. Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. Activity in the reverse direction was 50-fold lower than that in the forward direction. The NADH-BDH had higher activity with longer chained aldehydes and was inhibited by metabolites containing an adenine moiety. This protein family belongs to the so-called iron-containing alcohol dehydrogenase superfamily. Since members of this superfamily use different divalent ions, preferentially iron or zinc, it has been suggested to be renamed to family III metal-dependent polyol dehydrogenases.
Probab=71.80 E-value=20 Score=36.97 Aligned_cols=126 Identities=21% Similarity=0.208 Sum_probs=62.0
Q ss_pred cccccCceeecCCcc-c---ccCCCCCCcEEEEEcCccCCCChHHHHHHHHHhhcc--CceEEeeccCchhHHHHHHHHH
Q 014315 59 NYYIPNYILVSGSEV-Q---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNE--NQVIDLGEKAPDKVLHQLYVTL 132 (427)
Q Consensus 59 ~~~ip~~~~~~~~~~-~---~~~~~~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~--~qv~dl~~~~p~~~l~~~~~~l 132 (427)
+|..|..+....... . ..... .++++|+.-+.+.... .+++.+.+.|.. .++...+...+..-++.+.+.+
T Consensus 3 ~~~~p~~i~~G~g~~~~l~~~~~~~-~~r~livt~~~~~~~~--~~~~~v~~~L~~~g~~~~~~~~v~~~p~~~~v~~~~ 79 (382)
T cd08187 3 TFYNPTKIIFGKGTESELGKELKKY-GKKVLLVYGGGSIKKN--GLYDRVIASLKEAGIEVVELGGVEPNPRLETVREGI 79 (382)
T ss_pred eecCCCEEEECCCHHHHHHHHHHHh-CCEEEEEeCCcHHHhc--CcHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHH
Confidence 355677766554221 1 11111 3677777665544322 234555655543 2332222212222122122222
Q ss_pred HHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC--------------C-CCCCCCEEEEeC--CCCcchhhhcC
Q 014315 133 EKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL--------------K-LPHSPPVATVPL--GTGNNIPFSFG 195 (427)
Q Consensus 133 ~~l~~~gd~~a~~~~~~~~IIv~GGDGTv~~Vln~l~~~--------------~-~~~~~plgiIPl--GTGNDfAR~LG 195 (427)
+.++ ..+.+.||++|| |++..+.-.+.-. + ....+|+-.||. |||-...+.--
T Consensus 80 ~~~~---------~~~~D~IIaiGG-GS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~P~iaIPTTagTGsE~t~~av 149 (382)
T cd08187 80 ELCK---------EEKVDFILAVGG-GSVIDSAKAIAAGAPYDGDVWDFFTGKAKIEKALPVGTVLTLAATGSEMNGGAV 149 (382)
T ss_pred HHHH---------HcCCCEEEEeCC-hHHHHHHHHHHhHhhCCCCHHHHhcccCCCCCCCCEEEEeCCCchhhccCCCEE
Confidence 2111 124678999998 7777766554221 0 023578999996 78776666554
Q ss_pred CC
Q 014315 196 WG 197 (427)
Q Consensus 196 w~ 197 (427)
+.
T Consensus 150 i~ 151 (382)
T cd08187 150 IT 151 (382)
T ss_pred Ee
Confidence 43
No 69
>TIGR01357 aroB 3-dehydroquinate synthase. This model represents 3-dehydroquinate synthase, the enzyme catalyzing the second of seven steps in the shikimate pathway of chorismate biosynthesis. Chorismate is the last common intermediate in the biosynthesis of all three aromatic amino acids.
Probab=70.98 E-value=19 Score=36.51 Aligned_cols=91 Identities=15% Similarity=0.225 Sum_probs=46.8
Q ss_pred CcEEEEEcCccCCCChHHHHHHHHHhhccC--c--eEEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 014315 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNEN--Q--VIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (427)
Q Consensus 82 ~~v~vivNp~SG~~~g~~~~~~~~~~L~~~--q--v~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GG 157 (427)
++++|+..+..- ..+.+.+.+.|... . ++.+....+...++.+.+.++.+.+.+ ..+.+.||++||
T Consensus 21 ~~~livtd~~~~----~~~~~~v~~~L~~~g~~~~~~~~~~~e~~~~~~~v~~~~~~~~~~~------~~r~d~IIavGG 90 (344)
T TIGR01357 21 SKLVIITDETVA----DLYADKLLEALQALGYNVLKLTVPDGEESKSLETVQRLYDQLLEAG------LDRSSTIIALGG 90 (344)
T ss_pred CeEEEEECCchH----HHHHHHHHHHHHhcCCceeEEEeCCCCCCCCHHHHHHHHHHHHHcC------CCCCCEEEEEcC
Confidence 678888765443 23566666666532 2 223332222222222222222222110 123467888887
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEEeC
Q 014315 158 DGTASWLLGVVSDLKLPHSPPVATVPL 184 (427)
Q Consensus 158 DGTv~~Vln~l~~~~~~~~~plgiIPl 184 (427)
|++..+...+.... ...+|+..||.
T Consensus 91 -Gsv~D~aK~iA~~~-~~~~p~i~VPT 115 (344)
T TIGR01357 91 -GVVGDLAGFVAATY-MRGIRFIQVPT 115 (344)
T ss_pred -hHHHHHHHHHHHHH-ccCCCEEEecC
Confidence 88888877664211 13578999997
No 70
>PRK09423 gldA glycerol dehydrogenase; Provisional
Probab=70.40 E-value=17 Score=37.26 Aligned_cols=117 Identities=18% Similarity=0.137 Sum_probs=62.4
Q ss_pred ccccccCceeecCCcc-c---ccCCCCCCcEEEEEcCccCCCChHHHHHHHHHhhccC--ce-EEeec-cCchhHHHHHH
Q 014315 58 NNYYIPNYILVSGSEV-Q---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QV-IDLGE-KAPDKVLHQLY 129 (427)
Q Consensus 58 ~~~~ip~~~~~~~~~~-~---~~~~~~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~--qv-~dl~~-~~p~~~l~~~~ 129 (427)
+.|.+|+.++...... . ...... ++++||.-+.+- ..+.+.+...|... .+ |+... ..+.+.++.+.
T Consensus 3 ~~f~~p~~i~~G~g~~~~l~~~l~~~g-~~~livtd~~~~----~~~~~~v~~~l~~~~~~~~~~~~~~ep~~~~v~~~~ 77 (366)
T PRK09423 3 RIFISPSKYVQGKGALARLGEYLKPLG-KRALVIADEFVL----GIVGDRVEASLKEAGLTVVFEVFNGECSDNEIDRLV 77 (366)
T ss_pred ccccCCceEEECCCHHHHHHHHHHHcC-CEEEEEEChhHH----HHHHHHHHHHHHhCCCeEEEEEeCCCCCHHHHHHHH
Confidence 4567788777654221 1 111122 677887654432 23666777766543 22 33222 22223232222
Q ss_pred HHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeC--CCCcchhhhcC
Q 014315 130 VTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTGNNIPFSFG 195 (427)
Q Consensus 130 ~~l~~l~~~gd~~a~~~~~~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPl--GTGNDfAR~LG 195 (427)
+.+ . + .+.+.||++|| |++..+...+.-. ..+|+..||. |||-..+..-.
T Consensus 78 ~~~---~--------~-~~~d~IIavGG-Gsv~D~aK~iA~~---~~~p~i~IPTtagtgSe~t~~av 129 (366)
T PRK09423 78 AIA---E--------E-NGCDVVIGIGG-GKTLDTAKAVADY---LGVPVVIVPTIASTDAPTSALSV 129 (366)
T ss_pred HHH---H--------h-cCCCEEEEecC-hHHHHHHHHHHHH---cCCCEEEeCCccccCccccCceE
Confidence 221 1 1 24578999998 7888888776532 3578999997 55554544333
No 71
>cd08173 Gro1PDH Sn-glycerol-1-phosphate dehydrogenase (Gro1PDH) catalyzes the reversible conversion between dihydroxyacetone phosphate and glycerol-1-phosphate using either NADH or NADPH as a coenzyme. Sn-glycerol-1-phosphate dehydrogenase (Gro1PDH, EC 1.1.1.261) plays an important role in the formation of the enantiomeric configuration of the glycerophosphate backbone (sn-glycerol-1-phosphate) of archaeal ether lipids. It catalyzes the reversible conversion between dihydroxyacetone phosphate and glycerol-1-phosphate using either NADH or NADPH as a coenzyme. The activity is zinc-dependent. One characteristic feature of archaea is that their cellular membrane has an ether linkage between the glycerol backbone and the hydrocarbon residues. The polar lipids of the members of Archaea consist of di- and tetraethers of glycerol with isoprenoid alcohols bound at the sn-2 and sn-3 positions of the glycerol moiety. The archaeal polar lipids have the enantiomeric configuration of a glycerophosph
Probab=70.30 E-value=21 Score=36.14 Aligned_cols=87 Identities=16% Similarity=0.112 Sum_probs=48.6
Q ss_pred CcEEEEEcCccCCCChHHHHHHHHHhhccC-ceEEeeccCc-hhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 014315 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNEN-QVIDLGEKAP-DKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 159 (427)
Q Consensus 82 ~~v~vivNp~SG~~~g~~~~~~~~~~L~~~-qv~dl~~~~p-~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGDG 159 (427)
++++|+..+.... .+++.++..|... .+.......| .+.++.+.+.+. + .+.+.||++|| |
T Consensus 26 ~~~liv~d~~~~~----~~~~~v~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~~-----------~-~~~d~iIaiGG-G 88 (339)
T cd08173 26 GRVLVVTGPTTKS----IAGKKVEALLEDEGEVDVVIVEDATYEEVEKVESSAR-----------D-IGADFVIGVGG-G 88 (339)
T ss_pred CeEEEEECCchHH----HHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHhh-----------h-cCCCEEEEeCC-c
Confidence 6788888655432 3566666666432 2211122222 222322222221 1 14578888887 8
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEEeCCCCc
Q 014315 160 TASWLLGVVSDLKLPHSPPVATVPLGTGN 188 (427)
Q Consensus 160 Tv~~Vln~l~~~~~~~~~plgiIPlGTGN 188 (427)
++..+...+.-. ..+|+..||.=.|+
T Consensus 89 s~~D~aK~~a~~---~~~p~i~iPTT~~t 114 (339)
T cd08173 89 RVIDVAKVAAYK---LGIPFISVPTAASH 114 (339)
T ss_pred hHHHHHHHHHHh---cCCCEEEecCcccC
Confidence 999888877532 35789999975444
No 72
>cd08194 Fe-ADH6 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Proteins of this family have not been characterized. Their specific function is unknown. The protein structure represents a dehydroquinate synthase-like fold and belongs to the alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contain different protein domains. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions.
Probab=68.01 E-value=31 Score=35.44 Aligned_cols=44 Identities=20% Similarity=0.282 Sum_probs=27.6
Q ss_pred cCcEEEEEcCchHHHHHHHHHhc---C----------C--CCCCCCEEEEeC--CCCcchhh
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSD---L----------K--LPHSPPVATVPL--GTGNNIPF 192 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~---~----------~--~~~~~plgiIPl--GTGNDfAR 192 (427)
+.+.||++|| |++..+.-.+.- . . ....+|+..||. |||--..+
T Consensus 80 ~~D~IIaiGG-GS~~D~AKaia~~~~~~~~~~~~~~~~~~~~~~~P~i~IPTtagtGsE~t~ 140 (375)
T cd08194 80 GCDVIIALGG-GSPIDTAKAIAVLATNGGSIRDYKGPRIVDKPGLPLIAIPTTAGTGSEVTR 140 (375)
T ss_pred CCCEEEEeCC-chHHHHHHHHHHHHhCCCCHHHHhCcccccCCCCCEEEECCCCccccccCC
Confidence 4578999988 677776655421 0 0 123578999997 66655543
No 73
>cd08171 GlyDH-like2 Glycerol dehydrogenase-like. Glycerol dehydrogenases-like. The proteins in this family have not been characterized, but they show sequence homology with glycerol dehydrogenase. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway. In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site.
Probab=67.59 E-value=18 Score=36.76 Aligned_cols=40 Identities=25% Similarity=0.331 Sum_probs=28.1
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeC--CCCcchh
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTGNNIP 191 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPl--GTGNDfA 191 (427)
+.+.||++|| |++..+...+... ..+|+..||. |||--..
T Consensus 78 ~~d~iiavGG-Gs~~D~aK~ia~~---~~~p~i~VPTt~gtgse~t 119 (345)
T cd08171 78 EADMIFAVGG-GKAIDTVKVLADK---LGKPVFTFPTIASNCAAVT 119 (345)
T ss_pred CCCEEEEeCC-cHHHHHHHHHHHH---cCCCEEEecCccccCcccc
Confidence 4578999998 8888888776542 2578999997 4554333
No 74
>PRK15138 aldehyde reductase; Provisional
Probab=66.37 E-value=30 Score=35.91 Aligned_cols=124 Identities=19% Similarity=0.214 Sum_probs=60.1
Q ss_pred cccccCceeecCCc-cc---ccCCCCCCcEEEEEcCccCCCChHHHHHHHHHhhccCceEEeeccCchhHHHHHHHHHHH
Q 014315 59 NYYIPNYILVSGSE-VQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEK 134 (427)
Q Consensus 59 ~~~ip~~~~~~~~~-~~---~~~~~~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv~dl~~~~p~~~l~~~~~~l~~ 134 (427)
+|..|..++..... .. .... .++++|+.-+.+= +...+++.+.+.|....+.......|..-++.+.+..+.
T Consensus 5 ~~~~P~~i~~G~g~~~~l~~~l~~--~~~~livt~~~~~--~~~g~~~~v~~~L~~~~~~~f~~v~~~p~~~~v~~~~~~ 80 (387)
T PRK15138 5 NLHTPTRILFGKGAIAGLREQIPA--DARVLITYGGGSV--KKTGVLDQVLDALKGMDVLEFGGIEPNPTYETLMKAVKL 80 (387)
T ss_pred EEeCCceEEECcCHHHHHHHHHhc--CCeEEEECCCchH--HhcCcHHHHHHHhcCCeEEEECCccCCCCHHHHHHHHHH
Confidence 45567777765432 11 1111 2567776543331 223345666666654433222222222222222222221
Q ss_pred hhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhc---C---------------CCCCCCCEEEEeC--CCCcchhhhc
Q 014315 135 FKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSD---L---------------KLPHSPPVATVPL--GTGNNIPFSF 194 (427)
Q Consensus 135 l~~~gd~~a~~~~~~~~IIv~GGDGTv~~Vln~l~~---~---------------~~~~~~plgiIPl--GTGNDfAR~L 194 (427)
.. + .+.+.||++|| |.+..+.-.+.- . .....+|+..||. |||-.....-
T Consensus 81 ~~--------~-~~~D~IIaiGG-GS~iD~AK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~P~iaVPTTaGTGSE~t~~a 150 (387)
T PRK15138 81 VR--------E-EKITFLLAVGG-GSVLDGTKFIAAAANYPENIDPWHILETGGKEIKSAIPMGSVLTLPATGSESNAGA 150 (387)
T ss_pred HH--------H-cCCCEEEEeCC-hHHHHHHHHHHHHHhCCCCCCHHHHHhccCCCcCCCCCEEEEecCCccccccCCCE
Confidence 11 1 24678999998 555544433310 0 0113468999997 8888776655
Q ss_pred CC
Q 014315 195 GW 196 (427)
Q Consensus 195 Gw 196 (427)
-+
T Consensus 151 vi 152 (387)
T PRK15138 151 VI 152 (387)
T ss_pred EE
Confidence 44
No 75
>cd08170 GlyDH Glycerol dehydrogenases (GlyDH) catalyzes oxidation of glycerol to dihydroxyacetone in glycerol dissmilation. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway . In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site.
Probab=66.19 E-value=18 Score=36.66 Aligned_cols=44 Identities=25% Similarity=0.176 Sum_probs=31.1
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeC--CCCcchhhhcC
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTGNNIPFSFG 195 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPl--GTGNDfAR~LG 195 (427)
+.+.||++|| |++..+.-.+.-. ..+|+..||. |||--.+..-.
T Consensus 77 ~~D~IIavGG-GS~iD~aK~ia~~---~~~P~iaIPTTagTgse~t~~av 122 (351)
T cd08170 77 GADVVIGIGG-GKTLDTAKAVADY---LGAPVVIVPTIASTDAPTSALSV 122 (351)
T ss_pred CCCEEEEecC-chhhHHHHHHHHH---cCCCEEEeCCccccCcccccceE
Confidence 4678999998 7787777766532 3578999997 67766555443
No 76
>cd08192 Fe-ADH7 Iron-containing alcohol dehydrogenases-like, involved in the linear alkylbenzenesulfonate (LAS) degradation pathway. NAD-dependent iron-containing alcohol dehydrogenase-like. Proteins in this family are NAD-dependent alcohol dehydrogenases which are involved in the linear alkylbenzenesulfonate (LAS) degradation pathway. They catalyze the oxidation of beta-hydroxy CoA ester to beta-oxo CoA ester, which then be subject to CoA-dependent thiolysis to yield acetyl-CoA and 6-C8-SPC-CoA. The major laundry surfactant in worldwide use is commercial linear alkylbenzenesulfonate (LAS) which contains 20 congeners of linear alkanes (C10 to C13). LAS is fully biodegradable in oxic environments. Degradation involves microbial communities. Parvibaculum lavamentivorans DS-1T is a representative member of many heterotrophic, LAS-degrading communities, in which it catalyzes the first steps of LAS degradation. Strain DS-1T is a small heterotrophic bacterium able to omega-oxygenate the comm
Probab=63.91 E-value=33 Score=35.09 Aligned_cols=45 Identities=29% Similarity=0.408 Sum_probs=27.6
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCC-------------------CCCCCCEEEEeC--CCCcchhhh
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSDLK-------------------LPHSPPVATVPL--GTGNNIPFS 193 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~~~-------------------~~~~~plgiIPl--GTGNDfAR~ 193 (427)
+.+.||++|| |++..+.-.+.-.. ....+|+..||. |||-...+.
T Consensus 81 ~~d~IIaiGG-GSviD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTtagtgse~t~~ 146 (370)
T cd08192 81 GCDGVIAFGG-GSALDLAKAVALMAGHPGPLWDYEDIEGGWPRITDAIPPLIAIPTTAGTGSEVGRA 146 (370)
T ss_pred CCCEEEEeCC-chHHHHHHHHHHHHhCCCCHHHHhcccccccccCCCCCCEEEecCCCchhhhhCCc
Confidence 4578998988 77777665542210 012478899987 666544443
No 77
>cd08188 Fe-ADH4 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase-like fold and is belonged to the alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contain different protein domains. Proteins of this family have not been characterized. Their specific function is unknown.
Probab=63.37 E-value=29 Score=35.78 Aligned_cols=47 Identities=21% Similarity=0.269 Sum_probs=29.1
Q ss_pred cCcEEEEEcCchHHHHHHHHH---hcC-----------C-CCCCCCEEEEeC--CCCcchhhhcC
Q 014315 148 KRLRLIVAGGDGTASWLLGVV---SDL-----------K-LPHSPPVATVPL--GTGNNIPFSFG 195 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l---~~~-----------~-~~~~~plgiIPl--GTGNDfAR~LG 195 (427)
+.+.||++|| |++..+.-.+ ... . ....+|+..||. |||-..++.--
T Consensus 85 ~~d~IIaiGG-GsviD~AK~ia~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTT~gTgSE~t~~av 148 (377)
T cd08188 85 GCDVIIAVGG-GSPIDCAKGIGIVASNGGHILDFEGVDKITRPLPPLICIPTTAGSGADVSQFAI 148 (377)
T ss_pred CCCEEEEeCC-chHHHHHHHHHHHHHCCCCHHHHhCcccccCCCCCEEEECCCCccccccCCeEE
Confidence 4678998988 6666666433 111 0 012468999997 78876666433
No 78
>PLN00180 NDF6 (NDH-dependent flow 6); Provisional
Probab=61.55 E-value=1.7 Score=39.13 Aligned_cols=14 Identities=43% Similarity=0.878 Sum_probs=11.4
Q ss_pred EEcCchHHHHHHHH
Q 014315 154 VAGGDGTASWLLGV 167 (427)
Q Consensus 154 v~GGDGTv~~Vln~ 167 (427)
-.|||||+||+-+.
T Consensus 130 gdGGDGT~hW~Yd~ 143 (180)
T PLN00180 130 GDGGDGTGHWVYER 143 (180)
T ss_pred ccCCCCceeeEeeh
Confidence 35999999998654
No 79
>PTZ00286 6-phospho-1-fructokinase; Provisional
Probab=60.78 E-value=25 Score=37.49 Aligned_cols=48 Identities=31% Similarity=0.392 Sum_probs=34.2
Q ss_pred CcEEEEEcCchHHHHHHH---HHhcCCCCCCCCEEEEeCCCCcchh---hhcCCCC
Q 014315 149 RLRLIVAGGDGTASWLLG---VVSDLKLPHSPPVATVPLGTGNNIP---FSFGWGK 198 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln---~l~~~~~~~~~plgiIPlGTGNDfA---R~LGw~~ 198 (427)
-..++++|||||+.-+.. .+.+. ...+++.-||-==-||+. +++|..+
T Consensus 177 I~~L~vIGGdgT~~~A~~L~ee~~~~--g~~I~VIGIPKTIDNDI~~td~S~GFdT 230 (459)
T PTZ00286 177 INILFTLGGDGTHRGALAIYKELRRR--KLNISVVGIPKTIDNDIPIIDESFGFQT 230 (459)
T ss_pred CCEEEEeCCchHHHHHHHHHHHHHHh--CCCceEEEeccccCCCCCCcccCcCchH
Confidence 457999999999875544 33322 235889999998899997 5666553
No 80
>TIGR02483 PFK_mixed phosphofructokinase. Members of this family that are characterized, save one, are phosphofructokinases dependent on pyrophosphate (EC 2.7.1.90) rather than ATP (EC 2.7.1.11). The exception is one of three phosphofructokinases from Streptomyces coelicolor. Family members are both bacterial and archaeal.
Probab=59.84 E-value=29 Score=35.25 Aligned_cols=38 Identities=34% Similarity=0.439 Sum_probs=29.1
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchh
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP 191 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfA 191 (427)
-+.+|++|||||+.-+ +.|.+. .+++--||-==-||+.
T Consensus 95 Id~LivIGGdgS~~~a-~~L~~~----gi~vigiPkTIDNDl~ 132 (324)
T TIGR02483 95 LDALIAIGGDGTLGIA-RRLADK----GLPVVGVPKTIDNDLE 132 (324)
T ss_pred CCEEEEECCchHHHHH-HHHHhc----CCCEEeeccccCCCCc
Confidence 4679999999999655 345542 4777789987799997
No 81
>cd08177 MAR Maleylacetate reductase is involved in many aromatic compounds degradation pathways of aerobic microbes. Maleylacetate reductases (MAR) play an important role in the degradation of aromatic compounds in aerobic microbes. In fungi and yeasts, the enzymes are involved in the catabolism of compounds such as phenol, tyrosine, benzoate, 4-hydroxybenzoate and resorcinol. In bacteria, the enzymes contribute to the degradation of resorcinol, 2,4-dihydroxybenzoate ([beta]-resorcylate) and 2,6-dihydroxybenzoate ([gamma]-resorcylate) via hydroxyquinol and maleylacetate. Maleylacetate reductases catalyze NADH- or NADPH-dependent reduction, at the carbon-carbon double bond, of maleylacetate or 2-chloromaleylacetate to 3-oxoadipate. In the case of 2-chloromaleylacetate, Maleylacetate reductases initially catalyses the NAD(P)H-dependent dechlorination to maleylacetate, which is then reduced to 3-oxoadipate. This enzyme is a homodimer. It is inhibited by thiol-blocking reagents such as p-
Probab=59.37 E-value=51 Score=33.35 Aligned_cols=88 Identities=19% Similarity=0.235 Sum_probs=48.0
Q ss_pred CcEEEEEcCccCCCChHHHHHHHHHhhccCc--eEEeecc-CchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 014315 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQ--VIDLGEK-APDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 158 (427)
Q Consensus 82 ~~v~vivNp~SG~~~g~~~~~~~~~~L~~~q--v~dl~~~-~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGD 158 (427)
++++|+..+. ....+++.+.+.|.... +|+-... .+.+.++.+.+.+ . ..+.+.||++||
T Consensus 24 ~~~livt~~~----~~~~~~~~v~~~l~~~~~~~~~~~~~~p~~~~v~~~~~~~---~---------~~~~d~IIaiGG- 86 (337)
T cd08177 24 SRALVLTTPS----LATKLAERVASALGDRVAGTFDGAVMHTPVEVTEAAVAAA---R---------EAGADGIVAIGG- 86 (337)
T ss_pred CeEEEEcChH----HHHHHHHHHHHHhccCCcEEeCCCCCCCCHHHHHHHHHHH---H---------hcCCCEEEEeCC-
Confidence 5677775432 22236777777776543 3432222 2223232222221 1 124578888887
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEEeC-CCCcc
Q 014315 159 GTASWLLGVVSDLKLPHSPPVATVPL-GTGNN 189 (427)
Q Consensus 159 GTv~~Vln~l~~~~~~~~~plgiIPl-GTGND 189 (427)
|++..+.-.+.-. ..+|+..||. -||..
T Consensus 87 Gs~iD~aK~ia~~---~~~p~i~IPTtatgse 115 (337)
T cd08177 87 GSTIDLAKAIALR---TGLPIIAIPTTLSGSE 115 (337)
T ss_pred cHHHHHHHHHHHH---hcCCEEEEcCCchhhh
Confidence 8998888876532 2578999995 24443
No 82
>PRK15454 ethanol dehydrogenase EutG; Provisional
Probab=59.13 E-value=52 Score=34.21 Aligned_cols=49 Identities=22% Similarity=0.184 Sum_probs=30.0
Q ss_pred cCcEEEEEcCchHHHHHHHHHh---cCC------------CCCCCCEEEEeC--CCCcchhhhcCCC
Q 014315 148 KRLRLIVAGGDGTASWLLGVVS---DLK------------LPHSPPVATVPL--GTGNNIPFSFGWG 197 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~---~~~------------~~~~~plgiIPl--GTGNDfAR~LGw~ 197 (427)
+.+.||++|| |.+..+.-.+. ... ....+|+..||. |||-...+.--+.
T Consensus 106 ~~D~IiavGG-GS~iD~AKaia~~~~~~~~~~~~~~~~~~~~~~~P~iaIPTtaGTGSE~t~~avi~ 171 (395)
T PRK15454 106 GCDGVIAFGG-GSVLDAAKAVALLVTNPDSTLAEMSETSVLQPRLPLIAIPTTAGTGSETTNVTVII 171 (395)
T ss_pred CcCEEEEeCC-hHHHHHHHHHHHHHhCCCccHHHHhcccccCCCCCEEEECCCCcchhhhCCeEEEE
Confidence 4678999998 55554443321 110 113578999996 7887777655443
No 83
>cd08199 EEVS 2-epi-5-epi-valiolone synthase (EEVS). 2-epi-5-epi-valiolone synthases catalyze the cyclization of sedoheptulose 7-phosphate to 2-epi-5-epi-valiolone in the biosynthesis of C(7)N-aminocyclitol-containing products. The cyclization product, 2-epi-5-epi-valiolone ((2S,3S,4S,5R)-5-(hydroxymethyl)cyclohexanon-2,3,4,5-tetrol), is a precursor of the valienamine moiety. The valienamine unit is responsible for their biological activities as various glycosidic hydrolases inhibitors. Two important microbial secondary metabolites, i.e., validamycin and acarbose, are used in agricultural and biomedical applications. Validamycine A is an antifungal antibiotic which has a strong trehalase inhibitory activity and has been used to control sheath blight disease in rice caused by Rhizoctonia solani. Acarbose is an alpha-glucosidase inhibitor used for the treatment of type II insulin-independent diabetes. Salbostatin produced by Streptomyces albus also belongs to this family. It exhibits s
Probab=59.02 E-value=44 Score=34.22 Aligned_cols=33 Identities=21% Similarity=0.443 Sum_probs=23.2
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeC
Q 014315 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (427)
Q Consensus 150 ~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPl 184 (427)
+.||++|| |++..+...+...- ...+|+-.||.
T Consensus 90 d~IVaiGG-G~v~D~ak~~A~~~-~rg~p~i~VPT 122 (354)
T cd08199 90 EPVLAIGG-GVLTDVAGLAASLY-RRGTPYVRIPT 122 (354)
T ss_pred CEEEEECC-cHHHHHHHHHHHHh-cCCCCEEEEcC
Confidence 66777776 88888888775311 13578888887
No 84
>cd08189 Fe-ADH5 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase-like fold and belongs to the alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contains different protein domain. Proteins of this family have not been characterized. Their specific function is unknown.
Probab=58.78 E-value=47 Score=34.14 Aligned_cols=48 Identities=19% Similarity=0.306 Sum_probs=29.2
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcC---C-------------CCCCCCEEEEeC--CCCcchhhhcCC
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSDL---K-------------LPHSPPVATVPL--GTGNNIPFSFGW 196 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~~---~-------------~~~~~plgiIPl--GTGNDfAR~LGw 196 (427)
+.+.||++|| |++..+.-.+.-. . ....+|+..||. |||-..++.--+
T Consensus 83 ~~d~IIaiGG-GS~~D~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTtagTGsE~t~~avi 148 (374)
T cd08189 83 GCDAILAVGG-GSVIDCAKAIAARAANPKKSLRKLTGLLKVKKPLPPLFAIPTTAGTGSEVTIAAVI 148 (374)
T ss_pred CCCEEEEeCC-ccHHHHHHHHHHHHhCCCCCHHHHhCccccCCCCCCEEEEECCCccccccCCeEEE
Confidence 4578888888 6666666544211 0 012368999996 677766655443
No 85
>cd08184 Fe-ADH3 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenase-like. Proteins of this family have not been characterized. Their specific function is unknown. The protein structure represents a dehydroquinate synthase-like fold and is belonged to the iron-containing alcohol dehydrogenase-like superfamily. They are distinct from other alcohol dehydrogenases which contain different protein domains. Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron or zinc ions. Members of this family are mainly found in bacteria.
Probab=58.63 E-value=77 Score=32.40 Aligned_cols=48 Identities=19% Similarity=0.147 Sum_probs=29.5
Q ss_pred cCcEEEEEcCchHHHHHHHHHhc---CC------------CCCCCCEEEEeC--CCCcchhhhcCC
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSD---LK------------LPHSPPVATVPL--GTGNNIPFSFGW 196 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~---~~------------~~~~~plgiIPl--GTGNDfAR~LGw 196 (427)
+.+.||++|| |++..+.-.+.- .. ....+|+..||. |||--..+.--+
T Consensus 81 ~~D~IIaiGG-GS~iD~AKaia~~~~~~~~~~~~~~~~~~~~~~~PlIaVPTTaGTGSE~t~~aVi 145 (347)
T cd08184 81 LPCAIVGIGG-GSTLDVAKAVSNMLTNPGSAEDYQGWDLVKNPAVYKIGIPTLSGTGAEASRTAVL 145 (347)
T ss_pred CCCEEEEeCC-cHHHHHHHHHHHHHhCCCCHHHhcccccccCCCCcEEEEeCCCccccccCCcEEE
Confidence 4578999988 566555544321 10 012467999996 888776665443
No 86
>cd08550 GlyDH-like Glycerol_dehydrogenase-like. Families of proteins related to glycerol dehydrogenases. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway. In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site. Some subfamilies have not been characterized till now.
Probab=58.37 E-value=36 Score=34.53 Aligned_cols=42 Identities=24% Similarity=0.212 Sum_probs=29.9
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeC--CCCcchhhh
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTGNNIPFS 193 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPl--GTGNDfAR~ 193 (427)
+.+.||++|| |++..+...+... ..+|+..||. |||-..++.
T Consensus 77 ~~d~IIavGG-Gs~~D~aK~ia~~---~~~p~i~VPTtagtgse~t~~ 120 (349)
T cd08550 77 EADVIIGVGG-GKTLDTAKAVADR---LDKPIVIVPTIASTCAASSNL 120 (349)
T ss_pred CCCEEEEecC-cHHHHHHHHHHHH---cCCCEEEeCCccccCccccce
Confidence 4578888887 8888888777542 2578999997 666555543
No 87
>cd08183 Fe-ADH2 Iron-containing alcohol dehydrogenases-like. Iron-containing alcohol dehydrogenases (Fe-ADH). Alcohol dehydrogenase catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. Its activity requires iron ions. The protein structure represents a dehydroquinate synthase-like fold and is a member of the iron-activated alcohol dehydrogenase-like family. They are distinct from other alcohol dehydrogenases which contains different protein domain. Proteins of this family have not been characterized. Their specific function is unknown. They are mainly found in bacteria.
Probab=57.78 E-value=54 Score=33.64 Aligned_cols=95 Identities=16% Similarity=0.142 Sum_probs=50.3
Q ss_pred CcEEEEEcCccCCCChHHHHHHHHHhhcc----CceEEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 014315 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNE----NQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (427)
Q Consensus 82 ~~v~vivNp~SG~~~g~~~~~~~~~~L~~----~qv~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GG 157 (427)
++++|+.-+.+. .++.+...|.. ..+|+... .|. .+.+.+.++..+ + .+.+.||++||
T Consensus 23 ~r~livtd~~~~------~~~~v~~~L~~~g~~~~~~~~~~-~p~--~~~v~~~~~~~~--------~-~~~D~IIaiGG 84 (374)
T cd08183 23 RRVLLVTGASSL------RAAWLIEALRAAGIEVTHVVVAG-EPS--VELVDAAVAEAR--------N-AGCDVVIAIGG 84 (374)
T ss_pred CcEEEEECCchH------HHHHHHHHHHHcCCeEEEecCCC-CcC--HHHHHHHHHHHH--------h-cCCCEEEEecC
Confidence 678888766553 45555555543 23354322 332 222222222111 1 24678999988
Q ss_pred chHHHHHHHHHhcC------------------C-CCCCCCEEEEeC--CCCcchhhhcC
Q 014315 158 DGTASWLLGVVSDL------------------K-LPHSPPVATVPL--GTGNNIPFSFG 195 (427)
Q Consensus 158 DGTv~~Vln~l~~~------------------~-~~~~~plgiIPl--GTGNDfAR~LG 195 (427)
|++..+.-.+.-. . ....+|+..||. |||-..++.--
T Consensus 85 -GS~~D~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTtagTGSE~t~~av 142 (374)
T cd08183 85 -GSVIDAGKAIAALLPNPGSVLDYLEGVGRGLPLDGPPLPFIAIPTTAGTGSEVTKNAV 142 (374)
T ss_pred -chHHHHHHHHHHHHcCCCCHHHHHhccCccccCCCCCCCEEEecCCCchhHHhCCeEE
Confidence 7777666544210 0 013578999996 57766665443
No 88
>TIGR02482 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokinase (EC 2.7.1.11) catalyzes the addition of phosphate from ATP to fructose 6-phosphate to give fructose 1,6-bisphosphate. This represents a key control step in glycolysis. This model hits bacterial ATP-dependent 6-phosphofructokinases which lack a beta-hairpin loop present in TIGR02483 family members. TIGR02483 contains members that are ATP-dependent as well as members that are pyrophosphate-dependent. TIGR02477 represents the pyrophosphate-dependent phosphofructokinase, diphosphate--fructose-6-phosphate 1-phosphotransferase (EC 2.7.1.90).
Probab=57.44 E-value=41 Score=33.81 Aligned_cols=39 Identities=31% Similarity=0.405 Sum_probs=29.7
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchh
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP 191 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfA 191 (427)
-+.+|++|||||+.-+.. |.+. ..+++--||-=--||+.
T Consensus 92 Id~Li~IGGdgs~~~a~~-L~e~---~~i~vigiPkTIDNDl~ 130 (301)
T TIGR02482 92 IEGLVVIGGDGSYTGAQK-LYEE---GGIPVIGLPGTIDNDIP 130 (301)
T ss_pred CCEEEEeCCchHHHHHHH-HHHh---hCCCEEeecccccCCCc
Confidence 467999999999876644 3331 25778889998899998
No 89
>PRK00843 egsA NAD(P)-dependent glycerol-1-phosphate dehydrogenase; Reviewed
Probab=56.68 E-value=53 Score=33.48 Aligned_cols=37 Identities=22% Similarity=0.236 Sum_probs=26.8
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcc
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNN 189 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGND 189 (427)
.+.||++|| |++..+...+.-. ..+|+-.||.=-++|
T Consensus 88 ~d~IIaiGG-Gsv~D~ak~vA~~---rgip~I~IPTT~~td 124 (350)
T PRK00843 88 AGFLIGVGG-GKVIDVAKLAAYR---LGIPFISVPTAASHD 124 (350)
T ss_pred CCEEEEeCC-chHHHHHHHHHHh---cCCCEEEeCCCccCC
Confidence 567888887 8999888877532 367899999644444
No 90
>PLN02834 3-dehydroquinate synthase
Probab=54.65 E-value=52 Score=34.81 Aligned_cols=93 Identities=17% Similarity=0.203 Sum_probs=47.8
Q ss_pred CCcEEEEEcCccCCCChHHHHHHHHHhhccC----ceEEee--ccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEE
Q 014315 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNEN----QVIDLG--EKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIV 154 (427)
Q Consensus 81 ~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~----qv~dl~--~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv 154 (427)
.++++||..+.... .+.+.+.+.|... .+++.. ...+.+.++.+.+.++.+.+.+ .++.+.||+
T Consensus 100 g~rvlIVtD~~v~~----~~~~~v~~~L~~~g~~~~v~~~v~~~gE~~ksl~~v~~~~~~l~~~~------~dr~~~VIA 169 (433)
T PLN02834 100 GKRVLVVTNETVAP----LYLEKVVEALTAKGPELTVESVILPDGEKYKDMETLMKVFDKALESR------LDRRCTFVA 169 (433)
T ss_pred CCEEEEEECccHHH----HHHHHHHHHHHhcCCceEEEEEEecCCcCCCCHHHHHHHHHHHHhcC------CCcCcEEEE
Confidence 36788888765432 3566666666432 333322 1111222222222222222111 123456777
Q ss_pred EcCchHHHHHHHHHhcCCCCCCCCEEEEeCC
Q 014315 155 AGGDGTASWLLGVVSDLKLPHSPPVATVPLG 185 (427)
Q Consensus 155 ~GGDGTv~~Vln~l~~~~~~~~~plgiIPlG 185 (427)
+|| |++..+...+...- ...+|+..||.-
T Consensus 170 iGG-Gsv~D~ak~~A~~y-~rgiplI~VPTT 198 (433)
T PLN02834 170 LGG-GVIGDMCGFAAASY-QRGVNFVQIPTT 198 (433)
T ss_pred ECC-hHHHHHHHHHHHHh-cCCCCEEEECCc
Confidence 777 88888887653211 236789999983
No 91
>cd08178 AAD_C C-terminal alcohol dehydrogenase domain of the acetaldehyde dehydrogenase-alcohol dehydrogenase bifunctional two-domain protein (AAD). Alcohol dehydrogenase domain located on the C-terminal of a bifunctional two-domain protein. The N-terminal of the protein contains an acetaldehyde-CoA dehydrogenase domain. This protein is involved in pyruvate metabolism. Pyruvate is converted to acetyl-CoA and formate by pyruvate formate-lysase (PFL). Under anaerobic condition, acetyl-CoA is reduced to acetaldehyde and ethanol by this two-domain protein. Acetyl-CoA is first converted into an enzyme-bound thiohemiacetal by the N-terminal acetaldehyde dehydrogenase domain. The enzyme-bound thiohemiacetal is subsequently reduced by the C-terminal NAD+-dependent alcohol dehydrogenase domain. In E. coli, this protein is called AdhE and was shown pyruvate formate-lysase (PFL) deactivase activity, which is involved in the inactivation of PFL, a key enzyme in anaerobic metabolism. In Escherichi
Probab=54.16 E-value=70 Score=33.19 Aligned_cols=48 Identities=21% Similarity=0.244 Sum_probs=29.8
Q ss_pred cCcEEEEEcCchHHHHHHHHHhc---C-----------------C------CCCCCCEEEEeC--CCCcchhhhcCC
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSD---L-----------------K------LPHSPPVATVPL--GTGNNIPFSFGW 196 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~---~-----------------~------~~~~~plgiIPl--GTGNDfAR~LGw 196 (427)
+.+.||++|| |++..+.-.+.- . + ....+|+..||. |||-..++..-+
T Consensus 78 ~~D~IIaiGG-GS~iD~AK~iA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~I~VPTTagTGSE~t~~avi 153 (398)
T cd08178 78 KPDTIIALGG-GSPMDAAKIMWLFYEHPEVDFEDLAQKFMDIRKRIYKFPKLGKKAKLVAIPTTSGTGSEVTPFAVI 153 (398)
T ss_pred CCCEEEEeCC-ccHHHHHHHHHHHHhCCCcchhHhhhhhcccccccccccccCCCCCEEEeCCCCcccccccCeEEE
Confidence 4578999998 566655544421 0 0 013568999996 787766555443
No 92
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=53.76 E-value=26 Score=31.53 Aligned_cols=60 Identities=18% Similarity=0.267 Sum_probs=39.9
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHc
Q 014315 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKN 217 (427)
Q Consensus 150 ~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~ 217 (427)
..-+.++|+ |...++..+... ...++-+.+|=+|| ||+.+.... ....+++.++++.+..
T Consensus 43 ~~n~g~~G~-t~~~~~~~l~~~-~~~~pd~Vii~~G~-ND~~~~~~~-----~~~~~~l~~li~~i~~ 102 (191)
T cd01836 43 WRLFAKTGA-TSADLLRQLAPL-PETRFDVAVISIGV-NDVTHLTSI-----ARWRKQLAELVDALRA 102 (191)
T ss_pred EEEEecCCc-CHHHHHHHHHhc-ccCCCCEEEEEecc-cCcCCCCCH-----HHHHHHHHHHHHHHHh
Confidence 356688898 456667766542 23467899999998 998763221 1234567788888775
No 93
>cd08182 HEPD Hydroxyethylphosphoate dehydrogenase (HEPD) catalyzes the reduction of phosphonoacetaldehyde (PnAA) to hydroxyethylphosphoate (HEP). Hydroxyethylphosphoate dehydrogenase (HEPD) catalyzes the reduction of phosphonoacetaldehyde (PnAA) to hydroxyethylphosphoate (HEP) with either NADH or NADPH as a cofactor. NADH is the preferred cofactor. PnAA is a biosynthetic intermediate for several phosphonates such as the antibiotic fosfomycin, phosphinothricin tripeptide (PTT), and 2-aminoethylphosphonate (AEP). This enzyme is named PhpC in PTT biosynthesis pathway in Streptomyces hygroscopicus and S. viridochromogenes. Members of this family are only found in bacteria.
Probab=52.75 E-value=87 Score=32.00 Aligned_cols=45 Identities=20% Similarity=0.353 Sum_probs=27.7
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcC-----------------C--CCCCCCEEEEeC--CCCcchhhh
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSDL-----------------K--LPHSPPVATVPL--GTGNNIPFS 193 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~~-----------------~--~~~~~plgiIPl--GTGNDfAR~ 193 (427)
+.+.||++|| |++..+.-.+.-. . ....+|+..||. |||--.+..
T Consensus 77 ~~D~IIavGG-Gs~~D~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~VPTtagtgse~t~~ 142 (367)
T cd08182 77 GPDAVLAVGG-GSVLDTAKALAALLGAPREALEDLRIRNKERENRERALPLIAIPTTAGTGSEVTPF 142 (367)
T ss_pred CcCEEEEeCC-cHHHHHHHHHHHHHhCCCcHHHHHHHhccCCCCCCCCCCEEEeCCCCCchhhhCCE
Confidence 3578888888 7777666554321 0 113578999997 566554443
No 94
>PRK06830 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional
Probab=52.37 E-value=35 Score=36.24 Aligned_cols=49 Identities=29% Similarity=0.367 Sum_probs=32.6
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCC-CCCCCCEEEEeCCCCcchh---hhcCCC
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLK-LPHSPPVATVPLGTGNNIP---FSFGWG 197 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~-~~~~~plgiIPlGTGNDfA---R~LGw~ 197 (427)
-..++++|||||+.-...--.+.+ ....+++--||-==-||+. +++|..
T Consensus 173 I~~L~vIGGdgT~~gA~~l~ee~~~~g~~I~VIGIPKTIDNDi~~td~S~GFd 225 (443)
T PRK06830 173 INILFVIGGDGTLRGASAIAEEIERRGLKISVIGIPKTIDNDINFIQKSFGFE 225 (443)
T ss_pred CCEEEEeCCchHHHHHHHHHHHHHHhCCCceEEEeccccCCCCcCcccCCCHH
Confidence 357999999999876544222110 1235788889987799997 455544
No 95
>PLN02564 6-phosphofructokinase
Probab=51.99 E-value=37 Score=36.48 Aligned_cols=41 Identities=27% Similarity=0.316 Sum_probs=29.0
Q ss_pred CcEEEEEcCchHHHHHHH---HHhcCCCCCCCCEEEEeCCCCcchh
Q 014315 149 RLRLIVAGGDGTASWLLG---VVSDLKLPHSPPVATVPLGTGNNIP 191 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln---~l~~~~~~~~~plgiIPlGTGNDfA 191 (427)
-..++++|||||+.-+.. .+.+. ..++++.-||-==-||+.
T Consensus 177 Id~LivIGGDGS~~gA~~L~e~~~~~--g~~i~VIGIPKTIDNDI~ 220 (484)
T PLN02564 177 INQVYIIGGDGTQKGASVIYEEIRRR--GLKVAVAGIPKTIDNDIP 220 (484)
T ss_pred CCEEEEECCchHHHHHHHHHHHHHHc--CCCceEEEecccccCCCc
Confidence 457999999999875543 23322 234568888987799997
No 96
>cd00363 PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to PFK family that includes ATP- and pyrophosphate (PPi)- dependent phosphofructokinases. Some members evolved by gene duplication and thus have a large C-terminal/N-terminal extension comprising a second PFK domain. Generally, ATP-PFKs are allosteric homotetramers, and PPi-PFKs are dimeric and nonallosteric except for plant PPi-PFKs which are allosteric heterotetramers.
Probab=51.26 E-value=46 Score=33.95 Aligned_cols=43 Identities=23% Similarity=0.192 Sum_probs=29.8
Q ss_pred CcEEEEEcCchHHHHHHHHHhcC-CCCCCCCEEEEeCCCCcchh
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDL-KLPHSPPVATVPLGTGNNIP 191 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~-~~~~~~plgiIPlGTGNDfA 191 (427)
-+.++++|||||+.-+..-.... +....+++--||-==-||+.
T Consensus 93 I~~Lv~IGGd~s~~~a~~L~e~~~~~~~~i~vigiPkTIDNDl~ 136 (338)
T cd00363 93 IDALVVIGGDGSYTGADLLTEEWPSKYQGFNVIGLPGTIDNDIK 136 (338)
T ss_pred CCEEEEeCCHHHHHHHHHHHHHHHhcCCCccEEEeeecccCCCc
Confidence 46799999999987664422211 11246889999976689987
No 97
>cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include bacterial ATP-dependent phosphofructokinases. These are allosrterically regulated homotetramers; the subunits are of about 320 amino acids.
Probab=50.19 E-value=54 Score=33.20 Aligned_cols=38 Identities=29% Similarity=0.440 Sum_probs=30.4
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchh
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP 191 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfA 191 (427)
-+.++++|||||+.-+.. |.+. .+++--||-==-||+.
T Consensus 93 Id~Li~IGGdgs~~~a~~-L~e~----~i~vigiPkTIDNDi~ 130 (317)
T cd00763 93 IDALVVIGGDGSYMGAMR-LTEH----GFPCVGLPGTIDNDIP 130 (317)
T ss_pred CCEEEEECCchHHHHHHH-HHHc----CCCEEEecccccCCCC
Confidence 467999999999877643 5542 4789999998899998
No 98
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=48.80 E-value=19 Score=32.02 Aligned_cols=61 Identities=16% Similarity=0.178 Sum_probs=35.5
Q ss_pred EEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcC
Q 014315 151 RLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNA 218 (427)
Q Consensus 151 ~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a 218 (427)
.-..++||.| .+++..+...-...+|.+.+|=+|| ||+.+.. + +....+++.++++.+...
T Consensus 26 ~N~Gi~G~~~-~~~~~~~~~~~~~~~p~~vvi~~G~-ND~~~~~--~---~~~~~~~~~~lv~~i~~~ 86 (171)
T cd04502 26 VNRGFGGSTL-ADCLHYFDRLVLPYQPRRVVLYAGD-NDLASGR--T---PEEVLRDFRELVNRIRAK 86 (171)
T ss_pred eecCcccchH-HHHHHHHHhhhccCCCCEEEEEEec-CcccCCC--C---HHHHHHHHHHHHHHHHHH
Confidence 3446778854 4555444332122467899999999 9986532 2 112334566777776543
No 99
>cd08175 G1PDH Glycerol-1-phosphate dehydrogenase (G1PDH) catalyzes the reversible reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in an NADH-dependent manner. Glycerol-1-phosphate dehydrogenase (G1PDH) plays a role in the synthesis of phosphoglycerolipids in Gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires a Ni++ ion. In Bacillus subtilis, it has been described as AraM gene in L-arabinose (ara) operon. AraM protein forms homodimer. This family is bacteria specific.
Probab=48.02 E-value=70 Score=32.40 Aligned_cols=34 Identities=26% Similarity=0.266 Sum_probs=25.9
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCC
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLG 185 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlG 185 (427)
+.+.||++|| |++..+...+.-. ..+|+-.||.=
T Consensus 80 ~~d~IIaIGG-Gs~~D~aK~vA~~---~~~p~i~IPTT 113 (348)
T cd08175 80 DTDLIIAVGS-GTINDITKYVSYK---TGIPYISVPTA 113 (348)
T ss_pred cCCEEEEECC-cHHHHHHHHHHHh---cCCCEEEecCc
Confidence 4578999998 7888888777543 35789999973
No 100
>PF12219 End_tail_spike: Catalytic domain of bacteriophage endosialidase; InterPro: IPR024430 This entry represents the C-terminal domain of endosialidases which is approximately 160 amino acids in length. There are two conserved sequence motifs: VSR and YGA. The endosialidase protein forms homotrimeric molecules and this domain complexes into a tail-spike stalk. The stalk region folds in a triple beta-helix that is interrupted by a small triple beta-prism domain. The tail-spike is a multifunctional protein device used by the phage to fulfil the following functions: (i) to adsorb to the bacterial polySia capsule (ii) to de-polymerise the capsule to gain access to the outer bacterial membrane, and finally (iii) to mediate tight adhesion to the membrane, a prerequisite for the initiation of the infection cycle [].; PDB: 3JU4_A 3GW6_A 3GVL_A 3GVK_B 3GVJ_A 1V0E_B 1V0F_E.
Probab=46.97 E-value=9.6 Score=33.75 Aligned_cols=14 Identities=64% Similarity=1.021 Sum_probs=11.2
Q ss_pred CcEEEEEcCchHHH
Q 014315 149 RLRLIVAGGDGTAS 162 (427)
Q Consensus 149 ~~~IIv~GGDGTv~ 162 (427)
..|+|+||||||-.
T Consensus 85 gQRlIvsGGegtss 98 (160)
T PF12219_consen 85 GQRLIVSGGEGTSS 98 (160)
T ss_dssp G-EEEEESSSSSSG
T ss_pred ccEEEEeCCCCccc
Confidence 45899999999954
No 101
>cd08174 G1PDH-like Glycerol-1-phosphate dehydrogenase-like. Glycerol-1-phosphate dehydrogenase-like. The proteins of this family have not been characterized. The protein sequences have high similarity with that of glycerol-1-phosphate dehydrogenase (G1PDH). G1PDH plays a role in the synthesis of phosphoglycerolipids in Gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires Ni++ ion. This family is bacteria specific.
Probab=46.83 E-value=1.6e+02 Score=29.58 Aligned_cols=36 Identities=14% Similarity=0.131 Sum_probs=27.0
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCc
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGN 188 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGN 188 (427)
.+.||++|| |++..+...+... ..+|+..||.=.++
T Consensus 76 ~d~iIaiGG-Gsv~D~aK~vA~~---~~~p~i~vPTt~~t 111 (331)
T cd08174 76 VDAVVGIGG-GKVIDVAKYAAFL---RGIPLSVPTTNLND 111 (331)
T ss_pred CCEEEEeCC-cHHHHHHHHHHhh---cCCCEEEecCcccc
Confidence 577888887 8999888877653 46889999974343
No 102
>cd08193 HVD 5-hydroxyvalerate dehydrogenase (HVD) catalyzes the oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+ as cofactor. 5-hydroxyvalerate dehydrogenase (HVD) is an iron-containing (type III) NAD-dependent alcohol dehydrogenase. It plays a role in the cyclopentanol metabolism biochemical pathway. It catalyzes the oxidation of 5-hydroxyvalerate to 5-oxovalerate with NAD+ as cofactor. This cyclopentanol (cpn) degradation pathway is present in some bacteria which can use cyclopentanol as sole carbon source. In Comamonas sp. strain NCIMB 9872, this enzyme is encoded by the CpnD gene.
Probab=46.66 E-value=1.2e+02 Score=31.02 Aligned_cols=45 Identities=27% Similarity=0.319 Sum_probs=28.1
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcC--------------CC-CCCCCEEEEeC--CCCcchhhh
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSDL--------------KL-PHSPPVATVPL--GTGNNIPFS 193 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~~--------------~~-~~~~plgiIPl--GTGNDfAR~ 193 (427)
+.+.||++|| |++..+...+.-. +. ...+|+..||. |||-...+.
T Consensus 83 ~~D~IIaiGG-Gs~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTTagtgSe~t~~ 144 (376)
T cd08193 83 GADGVIGFGG-GSSMDVAKLVAVLAGSDQPLADMYGVDLVAGPRLPLILVPTTAGTGSEVTPI 144 (376)
T ss_pred CCCEEEEeCC-chHHHHHHHHHHHHHCCCCHHHHhCCCccCCCCCCEEEeCCCCcchHhhCCe
Confidence 4578999988 7777766554221 00 13578889996 566555543
No 103
>PRK14072 6-phosphofructokinase; Provisional
Probab=44.41 E-value=63 Score=34.02 Aligned_cols=42 Identities=24% Similarity=0.312 Sum_probs=29.2
Q ss_pred CcEEEEEcCchHHHHHHHHHhcC-C-CCCCCCEEEEeCCCCcchh
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDL-K-LPHSPPVATVPLGTGNNIP 191 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~-~-~~~~~plgiIPlGTGNDfA 191 (427)
-+.+|++|||||+.-+.. |.+. + ....+++--||-==-||+.
T Consensus 104 Id~LivIGGdgS~~~a~~-L~e~~~~~g~~i~vIgIPkTIDNDl~ 147 (416)
T PRK14072 104 IGYFFYNGGNDSMDTALK-VSQLAKKMGYPIRCIGIPKTIDNDLP 147 (416)
T ss_pred CCEEEEECChHHHHHHHH-HHHHHHHhCCCceEEEeeecccCCCC
Confidence 468999999999876543 2221 0 1234788889975599998
No 104
>PF00465 Fe-ADH: Iron-containing alcohol dehydrogenase ; InterPro: IPR001670 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of ethanol to acetaldehyde with the concomitant reduction of NAD. Currently three, structurally and catalytically, different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Iron-containing ADH's have been found in yeast (gene ADH4) [], as well as in Zymomonas mobilis (gene adhB) []. These two iron-containing ADH's are closely related to the following enzymes: Escherichia coli propanediol oxidoreductase (1.1.1.77 from EC) (gene fucO) [], an enzyme involved in the metabolism of fucose and which also seems to contain ferrous ion(s). Clostridium acetobutylicum NADPH- and NADH-dependent butanol dehydrogenases (1.1.1 from EC) (genes adh1, bdhA and bdhB) [], an enzyme which has activity using butanol and ethanol as substrates. E. coli adhE [], an iron-dependent enzyme which harbor three different activities: alcohol dehydrogenase, acetaldehyde dehydrogenase (acetylating) (1.2.1.10 from EC) and pyruvate-formate-lyase deactivase. Bacterial glycerol dehydrogenase (1.1.1.6 from EC) (gene gldA or dhaD) []. Clostridium kluyveri NAD-dependent 4-hydroxybutyrate dehydrogenase (4hbd) (1.1.1.61 from EC). Citrobacter freundii and Klebsiella pneumoniae 1,3-propanediol dehydrogenase (1.1.1.202 from EC) (gene dhaT). Bacillus methanolicus NAD-dependent methanol dehydrogenase (1.1.1.244 from EC) []. E. coli and Salmonella typhimurium ethanolamine utilization protein eutG. E. coli hypothetical protein yiaY. ; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 1RRM_A 2BL4_A 2BI4_A 3BFJ_R 1KQ3_A 1JQ5_A 1JPU_A 1JQA_A 3JZD_A 3UHJ_A ....
Probab=43.14 E-value=64 Score=32.86 Aligned_cols=99 Identities=21% Similarity=0.173 Sum_probs=52.2
Q ss_pred cEEEEEcCccCCCChHHHHHHHHHhhcc--C--ceEE-eeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 014315 83 PVLVFINSKSGGQLGGKLLLTYRSLLNE--N--QVID-LGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (427)
Q Consensus 83 ~v~vivNp~SG~~~g~~~~~~~~~~L~~--~--qv~d-l~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GG 157 (427)
+++||..+ +-. ...+++.+...|.. . .+|+ +....+.+.++.+.+.+ +. .+.+.||++||
T Consensus 23 r~lvVt~~-~~~--~~~~~~~v~~~L~~~~i~~~~~~~~~~~p~~~~v~~~~~~~---~~---------~~~D~IIaiGG 87 (366)
T PF00465_consen 23 RVLVVTDP-SLS--KSGLVDRVLDALEEAGIEVQVFDGVGPNPTLEDVDEAAEQA---RK---------FGADCIIAIGG 87 (366)
T ss_dssp EEEEEEEH-HHH--HHTHHHHHHHHHHHTTCEEEEEEEESSS-BHHHHHHHHHHH---HH---------TTSSEEEEEES
T ss_pred CEEEEECc-hHH--hCccHHHHHHHHhhCceEEEEEecCCCCCcHHHHHHHHHHH---Hh---------cCCCEEEEcCC
Confidence 78888887 432 22267777777732 2 3344 22233333333232222 11 24678999998
Q ss_pred chHHHHHHHHHh---cCC-------------CCCCCCEEEEeC--CCCcchhhhcCCC
Q 014315 158 DGTASWLLGVVS---DLK-------------LPHSPPVATVPL--GTGNNIPFSFGWG 197 (427)
Q Consensus 158 DGTv~~Vln~l~---~~~-------------~~~~~plgiIPl--GTGNDfAR~LGw~ 197 (427)
|++..+.-.+. ... ....+|+..||. |||-.+.+...+.
T Consensus 88 -GS~~D~aK~va~~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTt~gtGsE~t~~avi~ 144 (366)
T PF00465_consen 88 -GSVMDAAKAVALLLANPGDLRDLLGKGPPPTKPALPLIAIPTTAGTGSEVTPYAVIY 144 (366)
T ss_dssp -HHHHHHHHHHHHHHTSSSCGGGGGCECSCCSS--SEEEEEESSSSSSGCCSSEEEEE
T ss_pred -CCcCcHHHHHHhhccCCCcHHHHHhhccccccCCCcEEEeeCCcccccccccccccc
Confidence 55555554432 211 012379999997 6666776655543
No 105
>COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family [Energy production and conversion]
Probab=41.52 E-value=1.4e+02 Score=30.70 Aligned_cols=88 Identities=23% Similarity=0.255 Sum_probs=54.1
Q ss_pred cccccCceeecCCcc-cccCC-CCCCcEEEEEcCccCCCChHHHHHHHHHhhccCceEEeeccCchhHHHHHHHHHHHhh
Q 014315 59 NYYIPNYILVSGSEV-QRSSL-IPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFK 136 (427)
Q Consensus 59 ~~~ip~~~~~~~~~~-~~~~~-~~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv~dl~~~~p~~~l~~~~~~l~~l~ 136 (427)
+|..|..++....+. .+... ..-.++++.+---|= +-.-+.+++...|...+++++..-.|...++-+.+.++-.+
T Consensus 5 ~y~nPTki~FGkg~i~~l~~ei~~~~kVLi~YGGGSI--KrnGvydqV~~~Lkg~~~~E~~GVEPNP~~~Tv~kaV~i~k 82 (384)
T COG1979 5 TYHNPTKILFGKGQIAELREEIPKDAKVLIVYGGGSI--KKNGVYDQVVEALKGIEVIEFGGVEPNPRLETLMKAVEICK 82 (384)
T ss_pred cccCCceEEecCchHHHHHhhccccCeEEEEecCccc--cccchHHHHHHHhcCceEEEecCCCCCchHHHHHHHHHHHH
Confidence 467799988876541 11111 222778888742221 23346788888888888999887667766665656554211
Q ss_pred hccchhhhhhccCcEEEEEcC
Q 014315 137 AAGDVFASEIEKRLRLIVAGG 157 (427)
Q Consensus 137 ~~gd~~a~~~~~~~~IIv~GG 157 (427)
+ +.-+.|+++||
T Consensus 83 e---------e~idflLAVGG 94 (384)
T COG1979 83 E---------ENIDFLLAVGG 94 (384)
T ss_pred H---------cCceEEEEecC
Confidence 1 23467888888
No 106
>PRK03202 6-phosphofructokinase; Provisional
Probab=41.34 E-value=83 Score=31.92 Aligned_cols=38 Identities=32% Similarity=0.434 Sum_probs=29.9
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchh
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP 191 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfA 191 (427)
-+.+|++|||||+.-+.. |.+ ..+++--||-==-||+.
T Consensus 94 Id~Li~IGGd~s~~~a~~-L~e----~~i~vigiPkTIDNDl~ 131 (320)
T PRK03202 94 IDALVVIGGDGSYMGAKR-LTE----HGIPVIGLPGTIDNDIA 131 (320)
T ss_pred CCEEEEeCChHHHHHHHH-HHh----cCCcEEEecccccCCCC
Confidence 468999999999987654 544 25788889987799998
No 107
>cd08196 DHQS-like1 Dehydroquinate synthase (DHQS)-like. DHQS catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis. Dehydroquinate synthase-like proteins. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds. The activity of DHQS requires NAD as cofactor. Proteins of this family share sequence similarity and functional motifs with that of dehydroquinate synthase, but the specific function has not been characterized.
Probab=41.19 E-value=1.9e+02 Score=29.62 Aligned_cols=91 Identities=15% Similarity=0.218 Sum_probs=44.9
Q ss_pred CcEEEEEcCccCCCChHHHHHHHHHhhccCceEEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHH
Q 014315 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTA 161 (427)
Q Consensus 82 ~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGDGTv 161 (427)
++++++..+.-. ..+.+.+++.|....++.+....+.+.++.+.+.++.+.+.+ ..+.+.||++|| |++
T Consensus 20 ~r~lIVtD~~v~----~l~~~~l~~~L~~~~~~~~~~~e~~k~l~~v~~~~~~~~~~~------~~r~d~iIaiGG-Gsv 88 (346)
T cd08196 20 ENDVFIVDANVA----ELYRDRLDLPLDAAPVIAIDATEENKSLEAVSSVIESLRQNG------ARRNTHLVAIGG-GII 88 (346)
T ss_pred CeEEEEECccHH----HHHHHHHHHHhcCCeEEEeCCCCCCCCHHHHHHHHHHHHHcC------CCCCcEEEEECC-hHH
Confidence 677888776542 235666777665433333332223322322222222222111 123367777777 788
Q ss_pred HHHHHHHhcCCCCCCCCEEEEeC
Q 014315 162 SWLLGVVSDLKLPHSPPVATVPL 184 (427)
Q Consensus 162 ~~Vln~l~~~~~~~~~plgiIPl 184 (427)
..+...+...- ...+++-.||.
T Consensus 89 ~D~ak~vA~~~-~rgi~~i~iPT 110 (346)
T cd08196 89 QDVTTFVASIY-MRGVSWSFVPT 110 (346)
T ss_pred HHHHHHHHHHH-HcCCCeEEecc
Confidence 88777664210 12345555553
No 108
>cd08191 HHD 6-hydroxyhexanoate dehydrogenase (HHD) catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate. 6-hydroxyhexanoate dehydrogenase (HHD). The 6-hydroxyhexanoate dehydrogenase catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate. Some bacteria can grow on cyclic ketones, cyclohexylamine, and alcohols as sole carbon source. Cyclohexylamine is an insecticide and antiseptic in various industries and is considered a possible environmental pollutant. The degradation of these chemical compounds are through the cyclohexanol and cyclohexanone biological oxidation pathway. The intermediates of this pathway include cyclohexanol, cyclohexanone, e-caprolactone, 6-hydroxyhexanoate, 6-oxohexanoate and adipate. The 6-hydroxyhexanoate dehydrogenase catalyzes the oxidation of 6-hydroxyhexanoate to 6-oxohexanoate.
Probab=40.59 E-value=1.7e+02 Score=30.23 Aligned_cols=47 Identities=28% Similarity=0.275 Sum_probs=30.1
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcC--------------C-CCCCCCEEEEeC--CCCcchhhhcC
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSDL--------------K-LPHSPPVATVPL--GTGNNIPFSFG 195 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~~--------------~-~~~~~plgiIPl--GTGNDfAR~LG 195 (427)
+.+.||++|| |++..+.-.+.-. + ....+|+..||. |||-..++.--
T Consensus 79 ~~D~IIaiGG-GS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTtagTGSE~t~~av 142 (386)
T cd08191 79 GPDVIIGLGG-GSCIDLAKIAGLLLAHGGDVRDYYGEFKVPGPVLPLIAVPTTAGTGSEVTPVAV 142 (386)
T ss_pred CCCEEEEeCC-chHHHHHHHHHHHHhCCCCHHHHhCccccCCCCCCEEEEeCCCcchhhhCCeEE
Confidence 4578898988 7777776655310 0 012578999995 67776666433
No 109
>cd08549 G1PDH_related Glycerol-1-phosphate_dehydrogenase and related proteins. Bacterial and archeal glycerol-1-phosphate dehydrogenase-like oxidoreductases. The proteins have similarity with glycerol-1-phosphate dehydrogenase (G1PDH). G1PDH plays a role in the synthesis of phosphoglycerolipids in gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires Ni++ ion. It also contains archaeal Sn-glycerol-1-phosphate dehydrogenase (Gro1PDH) that plays an important role in the formation of the enantiomeric configuration of the glycerophosphate backbone (sn-glycerol-1-phosphate) of archaeal ether lipids.
Probab=39.83 E-value=1.2e+02 Score=30.57 Aligned_cols=34 Identities=29% Similarity=0.252 Sum_probs=25.7
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCC
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLG 185 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlG 185 (427)
+.+.||++|| |++..+...+.-. ..+|+-.||.=
T Consensus 80 ~~d~IIaiGG-Gsv~D~aK~iA~~---~gip~I~VPTT 113 (332)
T cd08549 80 DTEFLLGIGS-GTIIDLVKFVSFK---VGKPFISVPTA 113 (332)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHH---cCCCEEEeCCC
Confidence 4577888988 8888888877532 36789999973
No 110
>PRK06203 aroB 3-dehydroquinate synthase; Reviewed
Probab=39.52 E-value=1.7e+02 Score=30.51 Aligned_cols=92 Identities=16% Similarity=0.237 Sum_probs=48.4
Q ss_pred CCcEEEEEcCccCCCChHHHHHHHHHhhccC----ceEEee-------ccCch-hHHHHHHHHHHHhhhccchhhhhhcc
Q 014315 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNEN----QVIDLG-------EKAPD-KVLHQLYVTLEKFKAAGDVFASEIEK 148 (427)
Q Consensus 81 ~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~----qv~dl~-------~~~p~-~~l~~~~~~l~~l~~~gd~~a~~~~~ 148 (427)
.++++||..+.--. ....+++.+.+.|... .+|+.. ...|. +.+..+.+.+. +. ...+
T Consensus 42 ~~r~liVtD~~v~~-~~~~l~~~v~~~L~~~g~~~~~~~~~~~~~~ge~~k~~~~~v~~i~~~~~---~~------~~dr 111 (389)
T PRK06203 42 PKKVLVVIDSGVLR-AHPDLLEQITAYFAAHADVLELVAEPLVVPGGEAAKNDPALVEALHAAIN---RH------GIDR 111 (389)
T ss_pred CCeEEEEECchHHH-hhhhHHHHHHHHHHhcCCceeeeeeEEEccCCccCCCcHHHHHHHHHHHH---Hc------CCCC
Confidence 36788888755432 1123567777777532 123311 11232 32333333332 11 1223
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeC
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPl 184 (427)
.+.||++|| |++..+...+... ....+|+-.||.
T Consensus 112 ~d~IIaiGG-Gsv~D~ak~iA~~-~~rgip~I~IPT 145 (389)
T PRK06203 112 HSYVLAIGG-GAVLDMVGYAAAT-AHRGVRLIRIPT 145 (389)
T ss_pred CceEEEeCC-cHHHHHHHHHHHH-hcCCCCEEEEcC
Confidence 457888887 8888887766432 123578999996
No 111
>PLN02884 6-phosphofructokinase
Probab=38.62 E-value=78 Score=33.33 Aligned_cols=41 Identities=27% Similarity=0.267 Sum_probs=29.2
Q ss_pred CcEEEEEcCchHHHHHHHH---HhcCCCCCCCCEEEEeCCCCcchh
Q 014315 149 RLRLIVAGGDGTASWLLGV---VSDLKLPHSPPVATVPLGTGNNIP 191 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~---l~~~~~~~~~plgiIPlGTGNDfA 191 (427)
-+.+|++|||||+.-+..- +... ...+++--||-==-||+.
T Consensus 144 Id~LivIGGdgS~~~a~~L~~~~~~~--g~~i~vIGIPkTIDNDi~ 187 (411)
T PLN02884 144 INMLFVLGGNGTHAGANAIHNECRKR--KMKVSVVGVPKTIDNDIL 187 (411)
T ss_pred CCEEEEECCchHHHHHHHHHHHHHHc--CCCceEEeccccccCCCc
Confidence 4689999999998755432 2112 234788889987789986
No 112
>KOG2178 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=37.01 E-value=18 Score=37.61 Aligned_cols=59 Identities=25% Similarity=0.388 Sum_probs=39.4
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCe
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKE 220 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~ 220 (427)
..+.||..||||||--...-..+ .-|||=-.-+|| ||.=.- .+.++..+.+.+|.+++.
T Consensus 168 ~~D~iItLGGDGTvL~aS~LFq~----~VPPV~sFslGs-------lGFLtp---f~f~~f~~~l~~v~~~~~ 226 (409)
T KOG2178|consen 168 RFDLIITLGGDGTVLYASSLFQR----SVPPVLSFSLGS-------LGFLTP---FPFANFQEQLARVLNGRA 226 (409)
T ss_pred ceeEEEEecCCccEEEehhhhcC----CCCCeEEeecCC-------cccccc---ccHHHHHHHHHHHhcCcc
Confidence 34689999999998766665543 346665555553 454331 234678889999999874
No 113
>PRK06555 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Validated
Probab=36.90 E-value=79 Score=33.19 Aligned_cols=41 Identities=20% Similarity=0.187 Sum_probs=29.6
Q ss_pred CcEEEEEcCchHHHHHHHH---HhcCCCCCCCCEEEEeCCCCcchh
Q 014315 149 RLRLIVAGGDGTASWLLGV---VSDLKLPHSPPVATVPLGTGNNIP 191 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~---l~~~~~~~~~plgiIPlGTGNDfA 191 (427)
-+.++++|||||+.-+..- +.+. ...+++--||-==-||+.
T Consensus 113 Id~Li~IGGdgS~~~a~~L~~~~~~~--g~~i~vvgIPkTIDNDl~ 156 (403)
T PRK06555 113 VDILHTIGGDDTNTTAADLAAYLAEN--GYDLTVVGLPKTIDNDVV 156 (403)
T ss_pred CCEEEEECChhHHHHHHHHHHHHHHh--CCCceEEEeeeeeeCCCC
Confidence 4679999999998765432 2222 125889999987889996
No 114
>cd08198 DHQS-like2 Dehydroquinate synthase (DHQS)-like. DHQS catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis. Dehydroquinate synthase-like proteins. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds. The activity of DHQS requires NAD as cofactor. Proteins of this family share sequence similarity and functional motifs with that of dehydroquinate synthase, but the specific function has not been characterized.
Probab=36.80 E-value=2.2e+02 Score=29.44 Aligned_cols=36 Identities=17% Similarity=0.266 Sum_probs=25.9
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCC
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLG 185 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlG 185 (427)
+.+.||++|| |++..+...+... ....+|+-.||.=
T Consensus 99 r~~~IIalGG-G~v~D~ag~vA~~-~~rGip~I~IPTT 134 (369)
T cd08198 99 RHSYVIAIGG-GAVLDAVGYAAAT-AHRGVRLIRIPTT 134 (369)
T ss_pred cCcEEEEECC-hHHHHHHHHHHHH-hcCCCCEEEECCC
Confidence 3457888888 8999988877542 1246888889963
No 115
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=36.44 E-value=2.2e+02 Score=32.78 Aligned_cols=98 Identities=15% Similarity=0.125 Sum_probs=44.9
Q ss_pred ccccccCceeecCCcc-cccC-CCCCCcEEEEEcCccCCCChHHHHHHHHHhhc--c--CceEEeeccCchhHHHHHHHH
Q 014315 58 NNYYIPNYILVSGSEV-QRSS-LIPSCPVLVFINSKSGGQLGGKLLLTYRSLLN--E--NQVIDLGEKAPDKVLHQLYVT 131 (427)
Q Consensus 58 ~~~~ip~~~~~~~~~~-~~~~-~~~~~~v~vivNp~SG~~~g~~~~~~~~~~L~--~--~qv~dl~~~~p~~~l~~~~~~ 131 (427)
+-|.+|+.++...... .+.. ....++++|+..+..-. ..+++.+.+.|. . ..+.......|..-++.+.+.
T Consensus 455 ~~~~~P~~i~~G~g~l~~l~~~l~~~~~~lvVtd~~~~~---~g~~~~v~~~L~~~~~~i~~~~~~~v~~np~~~~v~~~ 531 (862)
T PRK13805 455 QWFKVPKKIYFERGSLPYLLDELDGKKRAFIVTDRFMVE---LGYVDKVTDVLKKRENGVEYEVFSEVEPDPTLSTVRKG 531 (862)
T ss_pred eeeecCCeEEECCCHHHHHHHHhcCCCEEEEEECcchhh---cchHHHHHHHHhcccCCCeEEEeCCCCCCcCHHHHHHH
Confidence 3466777776654321 1111 11236778877543321 125566666665 2 223222221222222222222
Q ss_pred HHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHH
Q 014315 132 LEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVV 168 (427)
Q Consensus 132 l~~l~~~gd~~a~~~~~~~~IIv~GGDGTv~~Vln~l 168 (427)
++.+.+ .+.+.||++|| |++..+...+
T Consensus 532 ~~~~~~---------~~~D~IIaiGG-GSviD~AK~i 558 (862)
T PRK13805 532 AELMRS---------FKPDTIIALGG-GSPMDAAKIM 558 (862)
T ss_pred HHHHHh---------cCCCEEEEeCC-chHHHHHHHH
Confidence 221111 24578888888 6666666554
No 116
>PRK10586 putative oxidoreductase; Provisional
Probab=35.52 E-value=1.8e+02 Score=29.82 Aligned_cols=37 Identities=19% Similarity=0.198 Sum_probs=26.1
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcc
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNN 189 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGND 189 (427)
.+.||++|| |++..+.-.+... ..+|+..||.=-|+|
T Consensus 87 ~d~iiavGG-Gs~iD~aK~~a~~---~~~p~i~vPT~a~t~ 123 (362)
T PRK10586 87 RQVVIGVGG-GALLDTAKALARR---LGLPFVAIPTIAATC 123 (362)
T ss_pred CCEEEEecC-cHHHHHHHHHHhh---cCCCEEEEeCCcccc
Confidence 467888887 7777777776542 367999999844443
No 117
>PRK05948 precorrin-2 methyltransferase; Provisional
Probab=34.83 E-value=4.3e+02 Score=25.51 Aligned_cols=48 Identities=17% Similarity=0.154 Sum_probs=29.1
Q ss_pred cCcEEEEEcCc----hHHHHHHHHHhcCCCCCCCCEEEEeCCC-CcchhhhcCCC
Q 014315 148 KRLRLIVAGGD----GTASWLLGVVSDLKLPHSPPVATVPLGT-GNNIPFSFGWG 197 (427)
Q Consensus 148 ~~~~IIv~GGD----GTv~~Vln~l~~~~~~~~~plgiIPlGT-GNDfAR~LGw~ 197 (427)
....+++..|| ||..+++..+.+. .....+=+||-=| ..-.|-.+|++
T Consensus 92 g~~v~~l~~GDp~~ys~~~~l~~~l~~~--~~~~~veivPGIss~~a~aa~~g~p 144 (238)
T PRK05948 92 GEDVAFACEGDVSFYSTFTYLAQTLQEL--YPQVAIQTIPGVCSPLAAAAALGIP 144 (238)
T ss_pred CCeEEEEeCCChHHHHHHHHHHHHHHhc--CCCCCEEEECChhHHHHHHHHhCCC
Confidence 34678899999 5666666666542 1356788888422 33444444444
No 118
>PRK14071 6-phosphofructokinase; Provisional
Probab=32.59 E-value=1.6e+02 Score=30.28 Aligned_cols=45 Identities=24% Similarity=0.363 Sum_probs=31.9
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchh---hhcCCC
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP---FSFGWG 197 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfA---R~LGw~ 197 (427)
-+.+|++|||||+.- +..|.+. ..+++--||-==-||+. .++|..
T Consensus 108 Id~Li~IGGdgS~~~-a~~L~~~---~~i~vIgiPkTIDNDl~~td~t~Gf~ 155 (360)
T PRK14071 108 LDALIGIGGDGSLAI-LRRLAQQ---GGINLVGIPKTIDNDVGATEVSIGFD 155 (360)
T ss_pred CCEEEEECChhHHHH-HHHHHHh---cCCcEEEecccccCCCcCcccCcChh
Confidence 467999999999864 3445441 26788889986699986 344444
No 119
>cd02007 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis. Terpeniods are plant natural products with important pharmaceutical activity. DXS catalyzes a transketolase-type condensation of pyruvate with D-glyceraldehyde-3-phosphate to form 1-deoxy-D-xylulose-5-phosphate (DXP) and carbon dioxide. The formation of DXP leads to the formation of the terpene precursor IPP (isopentyl diphosphate) and to the formation of thiamine (vitamin B1) and pyridoxal (vitamin B6).
Probab=32.58 E-value=1.5e+02 Score=27.64 Aligned_cols=65 Identities=25% Similarity=0.339 Sum_probs=37.7
Q ss_pred CcEEEEEcCchHHH-----HHHHHHhcCCCCCCCCEEEE---------eCCCCcchhhhcCCCCCC--CCCchHHHHHHH
Q 014315 149 RLRLIVAGGDGTAS-----WLLGVVSDLKLPHSPPVATV---------PLGTGNNIPFSFGWGKKN--PNTDQQAVLSFL 212 (427)
Q Consensus 149 ~~~IIv~GGDGTv~-----~Vln~l~~~~~~~~~plgiI---------PlGTGNDfAR~LGw~~~~--~~~~~~~~~~~l 212 (427)
..+|+++=|||+++ |.++...... .+.+.|+ |.+...+.++.+||.... .+.+.+.+.+++
T Consensus 97 ~~~vv~~~GDG~~~eG~~~Eal~~A~~~~---~~li~vvdnN~~~~~~~~~~~~~~~~a~G~~~~~~vdG~d~~~l~~a~ 173 (195)
T cd02007 97 KRKVIAVIGDGALTGGMAFEALNNAGYLK---SNMIVILNDNEMSISPNVGTPGNLFEELGFRYIGPVDGHNIEALIKVL 173 (195)
T ss_pred CCeEEEEEcccccccChHHHHHHHHHHhC---CCEEEEEECCCcccCCCCCCHHHHHHhcCCCccceECCCCHHHHHHHH
Confidence 46799999999987 4444333321 1112222 333456778899997642 444555666666
Q ss_pred HHHH
Q 014315 213 EQVK 216 (427)
Q Consensus 213 ~~i~ 216 (427)
+...
T Consensus 174 ~~a~ 177 (195)
T cd02007 174 KEVK 177 (195)
T ss_pred HHHH
Confidence 5543
No 120
>COG1691 NCAIR mutase (PurE)-related proteins [General function prediction only]
Probab=31.66 E-value=75 Score=30.83 Aligned_cols=33 Identities=30% Similarity=0.525 Sum_probs=26.6
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCC
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTG 187 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTG 187 (427)
...|+++|=||++-.|+.+|.+ .|+--+|.-+|
T Consensus 174 ~~lIVvAGMEGaLPsvvagLvD------~PVIavPTsVG 206 (254)
T COG1691 174 DVLIVVAGMEGALPSVVAGLVD------VPVIAVPTSVG 206 (254)
T ss_pred CeEEEEcccccchHHHHHhccC------CCeEecccccc
Confidence 4679999999999999999985 56666777655
No 121
>PRK07085 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional
Probab=31.55 E-value=1.2e+02 Score=33.24 Aligned_cols=41 Identities=17% Similarity=0.203 Sum_probs=29.2
Q ss_pred CcEEEEEcCchHHHHHHHH---HhcCCCCCCCCEEEEeCCCCcchh
Q 014315 149 RLRLIVAGGDGTASWLLGV---VSDLKLPHSPPVATVPLGTGNNIP 191 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~---l~~~~~~~~~plgiIPlGTGNDfA 191 (427)
-+.+|++|||||+.-+..- +.+. ...+++--||-==-||+.
T Consensus 165 Id~LviIGGd~S~~~A~~Lae~~~~~--~~~i~VIGIPkTIDNDl~ 208 (555)
T PRK07085 165 LDGLVIIGGDDSNTNAAILAEYFAKH--GCKTQVIGVPKTIDGDLK 208 (555)
T ss_pred CCEEEEeCCchHHHHHHHHHHHHHHh--CCCccEEEEeeeecCCCC
Confidence 3579999999998765432 2222 236788889986689997
No 122
>PLN03028 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Provisional
Probab=31.16 E-value=1.1e+02 Score=33.80 Aligned_cols=47 Identities=15% Similarity=0.236 Sum_probs=31.9
Q ss_pred CcEEEEEcCchHHHHHHH---HHhcCCCCCCCCEEEEeCCCCcchh-----hhcCCC
Q 014315 149 RLRLIVAGGDGTASWLLG---VVSDLKLPHSPPVATVPLGTGNNIP-----FSFGWG 197 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln---~l~~~~~~~~~plgiIPlGTGNDfA-----R~LGw~ 197 (427)
-+.+|++|||||..-+.- .+.+. ...+++--||-==-||+. .++|..
T Consensus 174 Id~LvvIGGddS~~~A~~Lae~~~~~--~~~i~VIGIPKTIDNDL~~~~td~s~GFd 228 (610)
T PLN03028 174 LDGLVIIGGVTSNTDAAQLAETFAEA--KCKTKVVGVPVTLNGDLKNQFVETNVGFD 228 (610)
T ss_pred CCEEEEeCCchHHHHHHHHHHHHHHc--CCCceEEEeceeeeCCCCCCCCCCCcCHH
Confidence 357999999999876533 22222 235788888986689997 455544
No 123
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=31.02 E-value=2.6e+02 Score=27.30 Aligned_cols=35 Identities=20% Similarity=0.065 Sum_probs=24.7
Q ss_pred hhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeC
Q 014315 141 VFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (427)
Q Consensus 141 ~~a~~~~~~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPl 184 (427)
+++.-....+.+|.+|| +|+.|++-. .+|.-++|.
T Consensus 234 ~m~~lm~~aDl~Is~~G-~T~~E~~a~--------g~P~i~i~~ 268 (279)
T TIGR03590 234 NMAELMNEADLAIGAAG-STSWERCCL--------GLPSLAICL 268 (279)
T ss_pred HHHHHHHHCCEEEECCc-hHHHHHHHc--------CCCEEEEEe
Confidence 34444456788888999 999998542 467777776
No 124
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=31.02 E-value=73 Score=28.22 Aligned_cols=49 Identities=22% Similarity=0.367 Sum_probs=31.8
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcC
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNA 218 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a 218 (427)
...++.++|.| |-+.+|=+|| ||+.+..+.+ ......++.++++.+.+.
T Consensus 45 ~~~~~~~~g~~-----------------pd~vii~~G~-ND~~~~~~~~---~~~~~~~~~~li~~i~~~ 93 (169)
T cd01831 45 EYSIIAYSGIG-----------------PDLVVINLGT-NDFSTGNNPP---GEDFTNAYVEFIEELRKR 93 (169)
T ss_pred cEEEEEecCCC-----------------CCEEEEECCc-CCCCCCCCCC---HHHHHHHHHHHHHHHHHH
Confidence 45788999998 5689999998 9986533211 112234566667776653
No 125
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=31.01 E-value=43 Score=29.59 Aligned_cols=61 Identities=18% Similarity=0.192 Sum_probs=36.8
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHc
Q 014315 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKN 217 (427)
Q Consensus 150 ~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~ 217 (427)
.....++||.|- +++..+...-...+|.+.+|=+|| ||+.+.. + +....++++++++.+..
T Consensus 26 v~n~g~~G~t~~-~~~~~~~~~~~~~~pd~v~i~~G~-ND~~~~~--~---~~~~~~~~~~l~~~~~~ 86 (174)
T cd01841 26 VNNLGIAGISSR-QYLEHIEPQLIQKNPSKVFLFLGT-NDIGKEV--S---SNQFIKWYRDIIEQIRE 86 (174)
T ss_pred EEecccccccHH-HHHHHHHHHHHhcCCCEEEEEecc-ccCCCCC--C---HHHHHHHHHHHHHHHHH
Confidence 356678999664 455555221112467899999998 9986532 2 12234566777777654
No 126
>TIGR02477 PFKA_PPi diphosphate--fructose-6-phosphate 1-phosphotransferase. Diphosphate--fructose-6-phosphate 1-phosphotransferase catalyzes the addition of phosphate from diphosphate (PPi) to fructose 6-phosphate to give fructose 1,6-bisphosphate (EC 2.7.1.90). The enzyme is also known as pyrophosphate-dependent phosphofructokinase. The usage of PPi-dependent enzymes in glycolysis presumably frees up ATP for other processes. TIGR02482 represents the ATP-dependent 6-phosphofructokinase enzyme contained within Pfam pfam00365: Phosphofructokinase. This model hits primarily bacterial, plant alpha, and plant beta sequences.
Probab=30.69 E-value=1.1e+02 Score=33.41 Aligned_cols=42 Identities=17% Similarity=0.170 Sum_probs=29.3
Q ss_pred CcEEEEEcCchHHHHHHHH---HhcCCCCCCCCEEEEeCCCCcchhh
Q 014315 149 RLRLIVAGGDGTASWLLGV---VSDLKLPHSPPVATVPLGTGNNIPF 192 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~---l~~~~~~~~~plgiIPlGTGNDfAR 192 (427)
-+.+|++|||||+.-+..- +.+. ...+++--||-==-||+..
T Consensus 162 Id~LviIGGdgS~~~A~~Lae~~~~~--g~~i~VIGIPkTIDNDl~~ 206 (539)
T TIGR02477 162 LDGLVIIGGDDSNTNAALLAEYFAKH--GLKTQVIGVPKTIDGDLKN 206 (539)
T ss_pred CCEEEEeCCchHHHHHHHHHHHHHhc--CCCceEEEEeeeecCCCCC
Confidence 3579999999998765432 2222 2357888889866899975
No 127
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=30.43 E-value=79 Score=28.21 Aligned_cols=58 Identities=5% Similarity=0.023 Sum_probs=37.6
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCC
Q 014315 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAK 219 (427)
Q Consensus 150 ~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~ 219 (427)
..=..+|||+++...+..+.. ..+|-+-+|=+|| ||+.... ...+++..+++.+.+..
T Consensus 34 v~N~g~~G~~~~~~~~~~~~~---~~~pd~vii~~G~-ND~~~~~--------~~~~~~~~~i~~i~~~~ 91 (177)
T cd01844 34 VINLGFSGNARLEPEVAELLR---DVPADLYIIDCGP-NIVGAEA--------MVRERLGPLVKGLRETH 91 (177)
T ss_pred eEEeeecccccchHHHHHHHH---hcCCCEEEEEecc-CCCccHH--------HHHHHHHHHHHHHHHHC
Confidence 456688999887554433322 2367899999998 8974321 13457888888887543
No 128
>PF00365 PFK: Phosphofructokinase; InterPro: IPR000023 The enzyme-catalysed transfer of a phosphoryl group from ATP is an important reaction in a wide variety of biological processes []. One enzyme that utilises this reaction is phosphofructokinase (PFK), which catalyses the phosphorylation of fructose-6-phosphate to fructose-1,6- bisphosphate, a key regulatory step in the glycolytic pathway [, ]. PFK exists as a homotetramer in bacteria and mammals (where each monomer possesses 2 similar domains), and as an octomer in yeast (where there are 4 alpha- (PFK1) and 4 beta-chains (PFK2), the latter, like the mammalian monomers, possessing 2 similar domains []). PFK is ~300 amino acids in length, and structural studies of the bacterial enzyme have shown it comprises two similar (alpha/beta) lobes: one involved in ATP binding and the other housing both the substrate-binding site and the allosteric site (a regulatory binding site distinct from the active site, but that affects enzyme activity). The identical tetramer subunits adopt 2 different conformations: in a 'closed' state, the bound magnesium ion bridges the phosphoryl groups of the enzyme products (ADP and fructose-1,6- bisphosphate); and in an 'open' state, the magnesium ion binds only the ADP [], as the 2 products are now further apart. These conformations are thought to be successive stages of a reaction pathway that requires subunit closure to bring the 2 molecules sufficiently close to react []. Deficiency in PFK leads to glycogenosis type VII (Tauri's disease), an autosomal recessive disorder characterised by severe nausea, vomiting, muscle cramps and myoglobinuria in response to bursts of intense or vigorous exercise []. Sufferers are usually able to lead a reasonably ordinary life by learning to adjust activity levels [].; GO: 0003872 6-phosphofructokinase activity, 0006096 glycolysis, 0005945 6-phosphofructokinase complex; PDB: 3O8O_E 3OPY_H 1PFK_A 2PFK_D 1MTO_F 3U39_C 6PFK_A 4PFK_A 3PFK_A 3HNO_B ....
Probab=29.13 E-value=75 Score=31.56 Aligned_cols=40 Identities=35% Similarity=0.424 Sum_probs=30.1
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhh
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPF 192 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR 192 (427)
-+.+|++|||||+.-+ ..|.+. ..+++--||-==-||+.-
T Consensus 93 Id~Li~IGG~gs~~~a-~~L~~~---~~i~vigiPkTIDNDi~g 132 (282)
T PF00365_consen 93 IDALIVIGGDGSMKGA-HKLSEE---FGIPVIGIPKTIDNDIPG 132 (282)
T ss_dssp ESEEEEEESHHHHHHH-HHHHHH---HHSEEEEEEEETTSSCTT
T ss_pred CCEEEEecCCCHHHHH-HHHHhc---CceEEEEEeccccCCcCC
Confidence 4689999999997765 345421 137899999988899984
No 129
>PF13685 Fe-ADH_2: Iron-containing alcohol dehydrogenase; PDB: 3CE9_C.
Probab=27.44 E-value=86 Score=30.66 Aligned_cols=38 Identities=21% Similarity=0.212 Sum_probs=24.2
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcc
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNN 189 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGND 189 (427)
+.+.||++|| ||++.+.--+... ...|+-.+|.=--||
T Consensus 75 ~~d~ii~vGg-G~i~D~~K~~A~~---~~~p~isVPTa~S~D 112 (250)
T PF13685_consen 75 DADLIIGVGG-GTIIDIAKYAAFE---LGIPFISVPTAASHD 112 (250)
T ss_dssp T--EEEEEES-HHHHHHHHHHHHH---HT--EEEEES--SSG
T ss_pred CCCEEEEeCC-cHHHHHHHHHHHh---cCCCEEEeccccccc
Confidence 3457888877 9999998876542 367899999866666
No 130
>TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type. Members of this family are eukaryotic (with one exception) ATP-dependent 6-phosphofructokinases (EC 2.7.1.11) in which two tandem copies of the phosphofructokinase are found. Members are found, often including several isozymes, in animals and fungi and in the bacterium Propionibacterium acnes KPA171202 (a human skin commensal).
Probab=27.18 E-value=1.7e+02 Score=33.37 Aligned_cols=43 Identities=26% Similarity=0.349 Sum_probs=30.3
Q ss_pred CcEEEEEcCchHHHHHHHHHhc-CCC-CCCCCEEEEeCCCCcchh
Q 014315 149 RLRLIVAGGDGTASWLLGVVSD-LKL-PHSPPVATVPLGTGNNIP 191 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~-~~~-~~~~plgiIPlGTGNDfA 191 (427)
-+.+|++|||||..-+..-... .+. ...+++--||-==-||++
T Consensus 479 Id~LivIGGdgs~~~a~~L~~~~~~~~~~~i~vvgIPkTIDNDi~ 523 (745)
T TIGR02478 479 IDGLLIIGGFEAFEALLQLEQAREKYPAFRIPMVVIPATISNNVP 523 (745)
T ss_pred CCEEEEeCChHHHHHHHHHHHHHhhCCCCCccEEEecccccCCCC
Confidence 4579999999998765543221 111 135889999998899997
No 131
>TIGR03846 sulfopy_beta sulfopyruvate decarboxylase, beta subunit. Nearly every member of this protein family is the beta subunit, or else the C-terminal region, of sulfopyruvate decarboxylase, in an archaeal species capable of coenzyme M biosynthesis. However, the enzyme also occurs in Roseovarius nubinhibens ISM in a degradative pathway, where the resulting sulfoacetaldehyde is desulfonated to acetyl phosphate, then converted to acetyl-CoA (see PubMed:19581363).
Probab=26.33 E-value=2e+02 Score=26.34 Aligned_cols=77 Identities=17% Similarity=0.229 Sum_probs=41.4
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCC-CCEEEE------------eCCC--Ccc---hhhhcCCCCCCCCCchHHHHH
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLPHS-PPVATV------------PLGT--GNN---IPFSFGWGKKNPNTDQQAVLS 210 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~~~-~plgiI------------PlGT--GND---fAR~LGw~~~~~~~~~~~~~~ 210 (427)
..+||++=|||....-++.|.-...... +.+-|| +..+ .-| +|+++||.....-.+.+++++
T Consensus 59 ~~~Vv~i~GDG~f~m~~~el~ta~~~~~~pv~~vV~NN~~yg~~~~q~~~~~~~~d~~~lA~a~G~~~~~~v~~~~~l~~ 138 (181)
T TIGR03846 59 DRTVIVIDGDGSLLMNLGVLPTIAAESPKNLILVILDNGAYGSTGNQPTPASRRTDLELVAKAAGIRNVEKVADEEELRD 138 (181)
T ss_pred CCcEEEEEcchHHHhhhhHHHHHHHhCCCCeEEEEEeCCccccccCcCCCCCCCCCHHHHHHHCCCCeEEEeCCHHHHHH
Confidence 3569999999999877766543210111 222332 2222 123 678999875321234467777
Q ss_pred HHHHHHcCCeEEEEE
Q 014315 211 FLEQVKNAKEMQIDS 225 (427)
Q Consensus 211 ~l~~i~~a~~~~iD~ 225 (427)
+|+.+....+.-||+
T Consensus 139 al~a~~~~~p~li~v 153 (181)
T TIGR03846 139 ALKALAMKGPTFIHV 153 (181)
T ss_pred HHHHHcCCCCEEEEE
Confidence 786333334455554
No 132
>cd00765 Pyrophosphate_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include pyrophosphate-dependent phosphofructokinases. These are found in bacteria as well as plants. These may be dimeric nonallosteric enzymes as in bacteria or allosteric heterotetramers as in plants.
Probab=23.89 E-value=1.7e+02 Score=32.00 Aligned_cols=43 Identities=19% Similarity=0.124 Sum_probs=29.7
Q ss_pred CcEEEEEcCchHHHHHHH---HHhcCCCCCCCCEEEEeCCCCcchhhh
Q 014315 149 RLRLIVAGGDGTASWLLG---VVSDLKLPHSPPVATVPLGTGNNIPFS 193 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln---~l~~~~~~~~~plgiIPlGTGNDfAR~ 193 (427)
-+.+|++|||||+.-+.. .+.+. ...+++--||-==-||+.-.
T Consensus 167 Id~LviIGGddS~~~A~~Lae~~~~~--g~~i~VIGVPKTIDNDl~~t 212 (550)
T cd00765 167 LDALVVIGGDDSNTNAALLAENFRSK--GLKTRVIGVPKTIDGDLKNK 212 (550)
T ss_pred CCEEEEeCCchHHHHHHHHHHHHHhc--CCCceEEEEeeeecCCCCCC
Confidence 357999999999875543 22222 23477888898668999863
No 133
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include eukaryotic ATP-dependent phosphofructokinases. These have evolved from the bacterial PFKs by gene duplication and fusion events and exhibit complex allosteric behavior.
Probab=23.38 E-value=3.8e+02 Score=30.68 Aligned_cols=42 Identities=26% Similarity=0.396 Sum_probs=30.6
Q ss_pred CcEEEEEcCchHHHHHHHHHhcC--CC-CCCCCEEEEeCCCCcchh
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDL--KL-PHSPPVATVPLGTGNNIP 191 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~--~~-~~~~plgiIPlGTGNDfA 191 (427)
-+.+|++|||||..-+.. |.+. +. ...+|+-.||.==-||+.
T Consensus 479 Id~LivIGGdgs~~~a~~-L~~~~~~y~~~~i~vVgIPkTIDNDv~ 523 (762)
T cd00764 479 IDGLIIVGGFEAYKGLLQ-LREAREQYEEFCIPMVLIPATVSNNVP 523 (762)
T ss_pred CCEEEEECChhHHHHHHH-HHHHHhhCCCCCccEEEecccccCCCC
Confidence 467999999999886653 3321 11 135889999998899987
No 134
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=23.00 E-value=2.4e+02 Score=24.51 Aligned_cols=52 Identities=19% Similarity=0.120 Sum_probs=33.9
Q ss_pred EEEEcCchHHHHHHHHHhcCC-CCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHH
Q 014315 152 LIVAGGDGTASWLLGVVSDLK-LPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVK 216 (427)
Q Consensus 152 IIv~GGDGTv~~Vln~l~~~~-~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~ 216 (427)
+|-++..+|..+.++.+.++. ....+.+.+|=+|| ||.. ..++++++++.+.
T Consensus 25 ~i~a~~g~~~~~~~~~l~~~~~~~~~~d~vvi~lGt-Nd~~------------~~~nl~~ii~~~~ 77 (150)
T cd01840 25 QIDAKVGRQMSEAPDLIRQLKDSGKLRKTVVIGLGT-NGPF------------TKDQLDELLDALG 77 (150)
T ss_pred EEEeeecccHHHHHHHHHHHHHcCCCCCeEEEEecC-CCCC------------CHHHHHHHHHHcC
Confidence 333444466678887775432 12357799999998 9972 1357888888774
No 135
>TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type. Members of this family are eukaryotic (with one exception) ATP-dependent 6-phosphofructokinases (EC 2.7.1.11) in which two tandem copies of the phosphofructokinase are found. Members are found, often including several isozymes, in animals and fungi and in the bacterium Propionibacterium acnes KPA171202 (a human skin commensal).
Probab=22.24 E-value=2.7e+02 Score=31.73 Aligned_cols=43 Identities=21% Similarity=0.178 Sum_probs=28.0
Q ss_pred CcEEEEEcCchHHHHHH----------HHHhcC-C-------CCCCCCEEEEeCCCCcchh
Q 014315 149 RLRLIVAGGDGTASWLL----------GVVSDL-K-------LPHSPPVATVPLGTGNNIP 191 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vl----------n~l~~~-~-------~~~~~plgiIPlGTGNDfA 191 (427)
-+.+|++|||||+.-+. ..+.+. + ....+++.-||-==-||+.
T Consensus 95 Id~LivIGGdgS~~~a~~l~~e~~~~~~~l~~~~~i~~~~~~~~~~l~vvGiPkTIDNDl~ 155 (745)
T TIGR02478 95 IDNLVVIGGDGSLTGADLFREEWPSLLEELVDTGKITAEQAEEHRHLTIVGLVGSIDNDMC 155 (745)
T ss_pred CCEEEEECChhHHHHHHHHHHHhHHHHHHHHHccchhHHHHhcCCCCcEEEEccccccCCC
Confidence 46899999999986543 122210 0 1236788889943389998
No 136
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=21.07 E-value=1.1e+02 Score=28.13 Aligned_cols=42 Identities=19% Similarity=0.044 Sum_probs=25.2
Q ss_pred EEEEcCchHH-----HHHHHHHhcCCCC-CCCCEEEEeCCCCcchhhhc
Q 014315 152 LIVAGGDGTA-----SWLLGVVSDLKLP-HSPPVATVPLGTGNNIPFSF 194 (427)
Q Consensus 152 IIv~GGDGTv-----~~Vln~l~~~~~~-~~~plgiIPlGTGNDfAR~L 194 (427)
-..+|||.|. .+++.-+...-+. .+|-+.+|=+|| ||+.+..
T Consensus 44 N~Gi~G~t~~~~~~~~~~l~r~~~~v~~~~~p~~vii~~G~-ND~~~~~ 91 (204)
T cd01830 44 NAGIGGNRLLADGLGPSALARFDRDVLSQPGVRTVIILEGV-NDIGASG 91 (204)
T ss_pred ECCccCcccccCCCChHHHHHHHHHHhcCCCCCEEEEeccc-ccccccc
Confidence 3477899875 2444444221011 246688888888 9997644
No 137
>PTZ00287 6-phosphofructokinase; Provisional
Probab=21.00 E-value=2.3e+02 Score=34.55 Aligned_cols=76 Identities=14% Similarity=0.194 Sum_probs=0.0
Q ss_pred hhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCC-CCCCCCEEEEeCCCCcchhh-----hcC
Q 014315 122 DKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLK-LPHSPPVATVPLGTGNNIPF-----SFG 195 (427)
Q Consensus 122 ~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGDGTv~~Vln~l~~~~-~~~~~plgiIPlGTGNDfAR-----~LG 195 (427)
.+..+.+.+.+.++ +-+.+||+|||||+.-..---.... ..-+..+--||-==-||+.. ++|
T Consensus 914 ~e~~~ka~~~lk~l------------~ID~LVvIGGDgS~t~A~~LaE~f~~~gi~i~VIGVPkTIDNDL~~~~tD~TiG 981 (1419)
T PTZ00287 914 KENRNKVCETVTNL------------QLNGLVMPGSNVTITEAALLAEYFLEKKIPTSVVGIPLTGSNNLIHELIETCVG 981 (1419)
T ss_pred HHHHHHHHHHHHHh------------CCCEEEEECCchHHHHHHHHHHHHHhcCCCccEEEeCceeeCCCCCCCCcCCCC
Q ss_pred CCCCCCCCchHHHHHHHHHHHc
Q 014315 196 WGKKNPNTDQQAVLSFLEQVKN 217 (427)
Q Consensus 196 w~~~~~~~~~~~~~~~l~~i~~ 217 (427)
... ++..+.+.|.+
T Consensus 982 FDT--------Av~~~seaI~n 995 (1419)
T PTZ00287 982 FDS--------STKVYASLIGN 995 (1419)
T ss_pred HHH--------HHHHHHHHHHH
No 138
>PLN02251 pyrophosphate-dependent phosphofructokinase
Probab=20.84 E-value=2.4e+02 Score=31.10 Aligned_cols=44 Identities=16% Similarity=0.092 Sum_probs=29.3
Q ss_pred CcEEEEEcCchHHHHHHHH---HhcCCCCCCCCEEEEeCCCCcchhhhc
Q 014315 149 RLRLIVAGGDGTASWLLGV---VSDLKLPHSPPVATVPLGTGNNIPFSF 194 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~---l~~~~~~~~~plgiIPlGTGNDfAR~L 194 (427)
-+.+|++|||||..-+..- +.+. ..++++--||-==-||+.-..
T Consensus 191 Id~LViIGGddS~~~A~~Lae~~~~~--g~~i~VIGVPKTIDNDL~~td 237 (568)
T PLN02251 191 LDGLVVIGGDDSNTNACLLAEYFRAK--NLKTRVIGCPKTIDGDLKSKE 237 (568)
T ss_pred CCEEEEeCCchHHHHHHHHHHHHHhc--CCCeeEEEeCceEeCCCCCCc
Confidence 4579999999998765432 2222 234677778875589987643
No 139
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=20.60 E-value=1e+02 Score=28.20 Aligned_cols=57 Identities=23% Similarity=0.279 Sum_probs=31.3
Q ss_pred EEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHc
Q 014315 154 VAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKN 217 (427)
Q Consensus 154 v~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~ 217 (427)
.++||-|.. ++.-+.+.-...+|.+.+|=+|| ||+.+. .+. ....++++++++.+..
T Consensus 50 Gi~G~tt~~-~~~rl~~~l~~~~pd~Vii~~Gt-ND~~~~--~~~---~~~~~~l~~li~~~~~ 106 (191)
T PRK10528 50 SISGDTSQQ-GLARLPALLKQHQPRWVLVELGG-NDGLRG--FPP---QQTEQTLRQIIQDVKA 106 (191)
T ss_pred CcCcccHHH-HHHHHHHHHHhcCCCEEEEEecc-CcCccC--CCH---HHHHHHHHHHHHHHHH
Confidence 567776643 33333321112357899999999 997542 221 1223456666666654
No 140
>COG0205 PfkA 6-phosphofructokinase [Carbohydrate transport and metabolism]
Probab=20.52 E-value=5.2e+02 Score=26.65 Aligned_cols=39 Identities=31% Similarity=0.378 Sum_probs=27.7
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchh
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP 191 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfA 191 (427)
-+.+|++|||||..-..- |.+. ...++-=||-==-||++
T Consensus 95 Id~LvvIGGDgS~~gA~~-Lae~---~~i~vVGvPkTIDNDi~ 133 (347)
T COG0205 95 IDALVVIGGDGSYTGAAL-LAEE---GGIPVVGVPKTIDNDIS 133 (347)
T ss_pred CCEEEEECCCChHHHHHH-HHHh---cCCcEEecCCCccCCCc
Confidence 467999999999876544 3331 23667677876689998
No 141
>TIGR01162 purE phosphoribosylaminoimidazole carboxylase, PurE protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase.
Probab=20.44 E-value=4.4e+02 Score=23.99 Aligned_cols=32 Identities=22% Similarity=0.366 Sum_probs=22.3
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCC
Q 014315 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTG 187 (427)
Q Consensus 150 ~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTG 187 (427)
..|.++|+.+-+--|+.++.. .|+-=+|.-++
T Consensus 56 viIa~AG~aa~Lpgvva~~t~------~PVIgvP~~~~ 87 (156)
T TIGR01162 56 VIIAGAGGAAHLPGMVAALTP------LPVIGVPVPSK 87 (156)
T ss_pred EEEEeCCccchhHHHHHhccC------CCEEEecCCcc
Confidence 457788999999999888753 34444566553
No 142
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.
Probab=20.41 E-value=3.3e+02 Score=26.76 Aligned_cols=47 Identities=15% Similarity=0.127 Sum_probs=30.0
Q ss_pred ccccCceeecCCcc------cccCCCCCCcEEEEEcCc-cCCCChHHHHHHHHH
Q 014315 60 YYIPNYILVSGSEV------QRSSLIPSCPVLVFINSK-SGGQLGGKLLLTYRS 106 (427)
Q Consensus 60 ~~ip~~~~~~~~~~------~~~~~~~~~~v~vivNp~-SG~~~g~~~~~~~~~ 106 (427)
+++||++..+..+. .+....|..|+++.-||. +|......++.++.+
T Consensus 101 ~~~~P~y~~~~~~~i~~~~~~v~~a~~~lpi~iYn~P~~tg~~l~~~~~~~L~~ 154 (288)
T cd00954 101 SAITPFYYKFSFEEIKDYYREIIAAAASLPMIIYHIPALTGVNLTLEQFLELFE 154 (288)
T ss_pred EEeCCCCCCCCHHHHHHHHHHHHHhcCCCCEEEEeCccccCCCCCHHHHHHHhc
Confidence 45688887764331 123344467998877885 666677777776664
No 143
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=20.13 E-value=1.2e+02 Score=26.62 Aligned_cols=59 Identities=24% Similarity=0.326 Sum_probs=32.1
Q ss_pred EEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcC
Q 014315 153 IVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNA 218 (427)
Q Consensus 153 Iv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a 218 (427)
..++|+.|-+ ++..+.+.-...+|.+.+|=+| +||+.+. ++ +.....++.++++.+...
T Consensus 42 ~g~~G~~~~~-~~~~l~~~~~~~~pd~v~i~~G-~ND~~~~--~~---~~~~~~~l~~li~~~~~~ 100 (177)
T cd01822 42 AGVSGDTTAG-GLARLPALLAQHKPDLVILELG-GNDGLRG--IP---PDQTRANLRQMIETAQAR 100 (177)
T ss_pred cCcCCcccHH-HHHHHHHHHHhcCCCEEEEecc-CcccccC--CC---HHHHHHHHHHHHHHHHHC
Confidence 4567776654 3333322111236779999999 5997542 22 112234566677766543
Done!