Query 014315
Match_columns 427
No_of_seqs 239 out of 1583
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 09:21:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014315.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014315hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s40_A Diacylglycerol kinase; 100.0 1.3E-39 4.4E-44 322.3 20.9 227 79-410 6-234 (304)
2 2qv7_A Diacylglycerol kinase D 100.0 1.3E-35 4.5E-40 297.3 21.0 225 81-409 24-250 (337)
3 2bon_A Lipid kinase; DAG kinas 100.0 2.4E-35 8.3E-40 295.0 20.9 226 81-410 29-256 (332)
4 2an1_A Putative kinase; struct 98.9 3.5E-09 1.2E-13 103.3 10.2 124 81-230 5-131 (292)
5 1yt5_A Inorganic polyphosphate 98.7 9.5E-09 3.2E-13 98.9 6.4 106 83-229 2-107 (258)
6 2i2c_A Probable inorganic poly 98.5 3.3E-07 1.1E-11 88.7 11.0 102 83-229 2-104 (272)
7 1u0t_A Inorganic polyphosphate 98.5 2.1E-07 7.3E-12 91.6 9.6 128 81-228 4-141 (307)
8 3afo_A NADH kinase POS5; alpha 98.0 1.8E-05 6.1E-10 80.4 10.9 160 51-229 10-182 (388)
9 1z0s_A Probable inorganic poly 94.2 0.074 2.5E-06 51.4 6.6 36 148-188 68-103 (278)
10 3pfn_A NAD kinase; structural 90.3 0.48 1.6E-05 47.4 7.0 66 148-227 108-173 (365)
11 3hl0_A Maleylacetate reductase 83.7 3.8 0.00013 40.5 9.1 105 62-184 11-119 (353)
12 3jzd_A Iron-containing alcohol 78.3 7.1 0.00024 38.6 8.9 105 62-184 13-121 (358)
13 3uhj_A Probable glycerol dehyd 76.5 3.5 0.00012 41.3 6.1 107 57-184 25-138 (387)
14 1oj7_A Hypothetical oxidoreduc 75.9 17 0.00058 36.3 11.1 120 60-193 27-170 (408)
15 2gru_A 2-deoxy-scyllo-inosose 74.9 4.8 0.00016 39.8 6.6 92 81-184 34-128 (368)
16 1o2d_A Alcohol dehydrogenase, 72.9 34 0.0012 33.6 12.3 119 59-192 15-158 (371)
17 3okf_A 3-dehydroquinate syntha 70.8 10 0.00035 38.0 7.9 93 80-184 61-157 (390)
18 4grd_A N5-CAIR mutase, phospho 69.7 22 0.00076 31.6 8.9 31 150-186 70-100 (173)
19 1sg6_A Pentafunctional AROM po 65.1 4.7 0.00016 40.3 4.1 41 149-191 106-148 (393)
20 3iv7_A Alcohol dehydrogenase I 63.2 17 0.00059 35.9 7.8 84 81-184 37-120 (364)
21 3qbe_A 3-dehydroquinate syntha 62.5 20 0.00067 35.6 8.0 90 82-184 44-137 (368)
22 3ox4_A Alcohol dehydrogenase 2 61.1 23 0.00077 35.1 8.2 118 59-191 5-147 (383)
23 1ta9_A Glycerol dehydrogenase; 61.0 13 0.00044 37.9 6.5 111 53-184 59-177 (450)
24 1jq5_A Glycerol dehydrogenase; 60.6 21 0.00071 35.0 7.8 106 58-184 5-118 (370)
25 3clh_A 3-dehydroquinate syntha 56.8 13 0.00044 36.3 5.5 92 81-184 26-119 (343)
26 1pfk_A Phosphofructokinase; tr 56.0 22 0.00077 34.6 7.0 38 149-191 95-132 (320)
27 3bfj_A 1,3-propanediol oxidore 55.6 71 0.0024 31.3 10.8 123 59-192 7-152 (387)
28 1ujn_A Dehydroquinate synthase 54.4 26 0.00089 34.2 7.3 90 81-184 28-118 (348)
29 3ce9_A Glycerol dehydrogenase; 53.4 21 0.00072 34.7 6.4 86 82-188 35-124 (354)
30 1zxx_A 6-phosphofructokinase; 49.6 24 0.00083 34.3 6.0 38 149-191 94-131 (319)
31 3kuu_A Phosphoribosylaminoimid 49.0 1E+02 0.0036 27.2 9.5 30 149-183 69-98 (174)
32 3rf7_A Iron-containing alcohol 47.7 68 0.0023 31.7 9.2 115 56-184 21-159 (375)
33 4hf7_A Putative acylhydrolase; 46.3 9.5 0.00032 33.7 2.4 61 153-217 56-116 (209)
34 4a3s_A 6-phosphofructokinase; 44.4 36 0.0012 33.0 6.4 38 149-191 94-131 (319)
35 1xah_A Sadhqs, 3-dehydroquinat 43.9 21 0.00072 34.8 4.7 90 82-184 32-124 (354)
36 2hig_A 6-phospho-1-fructokinas 39.6 38 0.0013 35.0 5.9 41 149-191 190-233 (487)
37 3ors_A N5-carboxyaminoimidazol 38.5 1.2E+02 0.0041 26.6 8.1 33 149-187 60-92 (163)
38 3oow_A Phosphoribosylaminoimid 36.1 1.3E+02 0.0045 26.4 8.0 33 149-187 62-94 (166)
39 3lp6_A Phosphoribosylaminoimid 35.9 1.4E+02 0.0048 26.4 8.2 34 149-188 64-97 (174)
40 3hbm_A UDP-sugar hydrolase; PS 35.0 75 0.0026 30.0 6.9 35 141-184 218-252 (282)
41 1o4v_A Phosphoribosylaminoimid 33.2 1.6E+02 0.0053 26.3 8.1 33 149-187 70-102 (183)
42 1xmp_A PURE, phosphoribosylami 33.1 1.6E+02 0.0053 26.0 8.0 33 149-187 68-100 (170)
43 3dc7_A Putative uncharacterize 32.8 23 0.00077 31.4 2.6 66 150-218 55-126 (232)
44 1rrm_A Lactaldehyde reductase; 31.9 87 0.003 30.6 7.1 120 59-191 5-149 (386)
45 3gw6_A Endo-N-acetylneuraminid 31.5 14 0.00049 35.1 1.1 15 149-163 46-60 (275)
46 2f48_A Diphosphate--fructose-6 31.3 45 0.0015 35.0 4.9 41 149-191 167-210 (555)
47 2x9a_A Attachment protein G3P; 30.7 12 0.00042 27.6 0.4 11 151-161 40-50 (65)
48 1u11_A PURE (N5-carboxyaminoim 29.3 1.9E+02 0.0067 25.7 8.0 33 149-187 78-110 (182)
49 3trh_A Phosphoribosylaminoimid 28.1 2.1E+02 0.007 25.2 7.9 30 150-185 64-93 (169)
50 3o8l_A 6-phosphofructokinase, 27.3 64 0.0022 35.2 5.4 42 149-191 490-534 (762)
51 1vlj_A NADH-dependent butanol 26.9 2.6E+02 0.0088 27.5 9.6 121 59-191 17-160 (407)
52 3opy_A 6-phosphofructo-1-kinas 25.5 1.3E+02 0.0045 33.7 7.5 42 149-191 689-733 (989)
53 3rg8_A Phosphoribosylaminoimid 24.3 1.6E+02 0.0053 25.7 6.4 29 150-184 61-89 (159)
54 2ywx_A Phosphoribosylaminoimid 23.8 2.1E+02 0.0072 24.8 7.1 30 149-184 53-82 (157)
55 4b4k_A N5-carboxyaminoimidazol 23.1 2.7E+02 0.0091 24.8 7.7 85 82-184 22-108 (181)
56 3opy_B 6-phosphofructo-1-kinas 21.8 1.4E+02 0.0048 33.3 6.8 42 149-191 663-707 (941)
57 3o8o_A 6-phosphofructokinase s 20.6 1.5E+02 0.0051 32.4 6.6 42 149-191 484-528 (787)
58 3hno_A Pyrophosphate-dependent 20.5 1.3E+02 0.0044 30.3 5.8 42 149-191 105-148 (419)
No 1
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=100.00 E-value=1.3e-39 Score=322.28 Aligned_cols=227 Identities=19% Similarity=0.164 Sum_probs=164.9
Q ss_pred CCCCcEEEEEcCccCCCChHHHHHHHHHhhccCce-EEee-ccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEc
Q 014315 79 IPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLG-EKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAG 156 (427)
Q Consensus 79 ~~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv-~dl~-~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~G 156 (427)
.++++++||+||+||++++.++++.+++.|....+ +++. .+.++++.+ +.+.+. ++.+.||++|
T Consensus 6 ~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~~~~a~~-~~~~~~-------------~~~d~vv~~G 71 (304)
T 3s40_A 6 TKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGDATK-YCQEFA-------------SKVDLIIVFG 71 (304)
T ss_dssp CSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCSTTHHHH-HHHHHT-------------TTCSEEEEEE
T ss_pred CCCCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccCcchHHH-HHHHhh-------------cCCCEEEEEc
Confidence 34688999999999999999999999998876432 3333 245666654 333221 2457899999
Q ss_pred CchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEeeeecCCC
Q 014315 157 GDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPK 236 (427)
Q Consensus 157 GDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~ 236 (427)
|||||+||+|++... +..+|||+||+||||||||+|||+. +++++++.|.+++.+++|+|+++-
T Consensus 72 GDGTl~~v~~~l~~~--~~~~~l~iiP~Gt~N~~ar~lg~~~--------~~~~a~~~i~~g~~~~iDlg~v~~------ 135 (304)
T 3s40_A 72 GDGTVFECTNGLAPL--EIRPTLAIIPGGTCNDFSRTLGVPQ--------NIAEAAKLITKEHVKPVDVAKANG------ 135 (304)
T ss_dssp CHHHHHHHHHHHTTC--SSCCEEEEEECSSCCHHHHHTTCCS--------SHHHHHHHHTTCCEEEEEEEEETT------
T ss_pred cchHHHHHHHHHhhC--CCCCcEEEecCCcHHHHHHHcCCCc--------cHHHHHHHHHhCCeEEEEEEEECC------
Confidence 999999999999763 2578999999999999999999986 578899999999999999999840
Q ss_pred CCCCCCCCCCCCCcccccccccccccccccCCcceeccceeeeeccChhHHHHHHHhhccccCccchhcccchhhHHHHH
Q 014315 237 EGSFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKL 316 (427)
Q Consensus 237 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~r~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~ 316 (427)
+||+|++|+|+||+|++.++..+ ++..|+++|++.
T Consensus 136 -------------------------------------~~F~~~~~~G~da~v~~~~~~~~--------k~~~G~~~Y~~~ 170 (304)
T 3s40_A 136 -------------------------------------QHFLNFWGIGLVSEVSNNIDAEE--------KAKLGKIGYYLS 170 (304)
T ss_dssp -------------------------------------EEESSEEEEC--------------------------CHHHHTT
T ss_pred -------------------------------------EEEEEEEeehHHHHHHHhcCHHH--------hhcCCchHHHHH
Confidence 37999999999999999987543 346799999999
Q ss_pred HHhhhcccccccCCCCcCcCceEEEEEEecCCcEEEEeecCceeEEEEEcCCCCcCCCCCCCCcccccccccCCCCCCCC
Q 014315 317 AGTQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVD 396 (427)
Q Consensus 317 g~~~~~~~~~l~~~~~k~~~~~i~l~v~~~dg~~~~i~l~~~~~~ivv~N~~s~GGG~~~w~~~~~~~~~~~~~~~a~~d 396 (427)
+++. ++ .++++ .++|++ ||+ .++. +..+++|+|++|||||+.++| +++++
T Consensus 171 ~l~~------l~--~~~~~--~~~i~~---dg~--~~~~--~~~~v~v~N~~~~Ggg~~~~p-------------~a~~~ 220 (304)
T 3s40_A 171 TIRT------VK--NAETF--PVKITY---DGQ--VYED--EAVLVMVGNGEYLGGIPSFIP-------------NVKCD 220 (304)
T ss_dssp TC--------------CCE--EEEEEE---TTE--EEEE--EEEEEEEECSSEETTEECSST-------------TCCTT
T ss_pred HHHH------Hh--hcCCc--eEEEEE---CCE--EEEe--EEEEEEEECCCcCCCCcccCC-------------CCcCC
Confidence 9988 54 22332 466777 786 4442 678999999999999999988 58999
Q ss_pred CCeEEEEEEecchh
Q 014315 397 DGLLEIVGFRDAWH 410 (427)
Q Consensus 397 DG~LEVv~v~~~~h 410 (427)
||+|||++++....
T Consensus 221 DG~Ldv~~v~~~~~ 234 (304)
T 3s40_A 221 DGTLDIFVVKSTGI 234 (304)
T ss_dssp SSCEEEEEEETTCH
T ss_pred CCEEEEEEEccCCH
Confidence 99999999998754
No 2
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=100.00 E-value=1.3e-35 Score=297.28 Aligned_cols=225 Identities=17% Similarity=0.149 Sum_probs=168.3
Q ss_pred CCcEEEEEcCccCCCChHHHHHHHHHhhccCce-EEeec-cCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 014315 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGE-KAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 158 (427)
Q Consensus 81 ~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv-~dl~~-~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGD 158 (427)
+++++||+||+||++++.++++.+++.|....+ +.+.. +.++++.+ +.+.+ . .+..+.|||+|||
T Consensus 24 m~~i~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~~~~a~~-~~~~~---~---------~~~~d~vvv~GGD 90 (337)
T 2qv7_A 24 RKRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIGDATL-EAERA---M---------HENYDVLIAAGGD 90 (337)
T ss_dssp CEEEEEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCSTTHHHH-HHHHH---T---------TTTCSEEEEEECH
T ss_pred cceEEEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecCcchHHH-HHHHH---h---------hcCCCEEEEEcCc
Confidence 567999999999999999999999999876543 33332 34555433 22221 0 1235789999999
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEeeeecCCCCC
Q 014315 159 GTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEG 238 (427)
Q Consensus 159 GTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~~g 238 (427)
|||+||++++.+. +..+|||+||+||||||||+|||+. ++.++++.|.+++.+++|+|+++
T Consensus 91 GTv~~v~~~l~~~--~~~~pl~iIP~GT~N~lAr~Lg~~~--------~~~~al~~i~~g~~~~iD~g~v~--------- 151 (337)
T 2qv7_A 91 GTLNEVVNGIAEK--PNRPKLGVIPMGTVNDFGRALHIPN--------DIMGALDVIIEGHSTKVDIGKMN--------- 151 (337)
T ss_dssp HHHHHHHHHHTTC--SSCCEEEEEECSSCCHHHHHTTCCS--------SHHHHHHHHHHTCEEEEEEEEET---------
T ss_pred hHHHHHHHHHHhC--CCCCcEEEecCCcHhHHHHHcCCCC--------CHHHHHHHHHcCCcEEEEEEEEC---------
Confidence 9999999999542 3579999999999999999999986 57888999999999999999874
Q ss_pred CCCCCCCCCCCcccccccccccccccccCCcceeccceeeeeccChhHHHHHHHhhccccCccchhcccchhhHHHHHHH
Q 014315 239 SFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAG 318 (427)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~r~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~ 318 (427)
.|+|+|++|+|+||+|+..++..+ ++..|+++|++.++
T Consensus 152 ----------------------------------~r~fl~~~~~G~~a~v~~~~~~~~--------k~~~G~~~Y~~~~l 189 (337)
T 2qv7_A 152 ----------------------------------NRYFINLAAGGQLTQVSYETPSKL--------KSIVGPFAYYIKGF 189 (337)
T ss_dssp ----------------------------------TEEESSEEEEECBCC---------------------CGGGSCCCTT
T ss_pred ----------------------------------CEEEEEEeeecccHHHHHHhhHHH--------HhccChHHHHHHHH
Confidence 037999999999999999887653 34568999999999
Q ss_pred hhhcccccccCCCCcCcCceEEEEEEecCCcEEEEeecCceeEEEEEcCCCCcCCCCCCCCcccccccccCCCCCCCCCC
Q 014315 319 TQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDG 398 (427)
Q Consensus 319 ~~~~~~~~l~~~~~k~~~~~i~l~v~~~dg~~~~i~l~~~~~~ivv~N~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dDG 398 (427)
+. ++ ..+.+ .++|++ ||+ .++ .+...+++.|++++|||..++| .++++||
T Consensus 190 ~~------l~--~~~~~--~~~i~~---dg~--~~~--~~~~~v~v~n~~~~gGg~~i~P-------------~a~~~DG 239 (337)
T 2qv7_A 190 EM------LP--QMKAV--DLRIEY---DGN--VFQ--GEALLFFLGLTNSMAGFEKLVP-------------DAKLDDG 239 (337)
T ss_dssp TT------GG--GBCCE--EEEEEE---TTE--EEE--EEEEEEEEESSCCCSSCSCSST-------------TCCSSSS
T ss_pred HH------HH--hCCCc--cEEEEE---CCE--EEE--eeEEEEEEECCCCCCCCCccCC-------------CCcCCCC
Confidence 88 43 22332 456777 786 343 2577888999999999999988 5899999
Q ss_pred eEEEEEEecch
Q 014315 399 LLEIVGFRDAW 409 (427)
Q Consensus 399 ~LEVv~v~~~~ 409 (427)
+|||++++...
T Consensus 240 ~ldv~~v~~~~ 250 (337)
T 2qv7_A 240 YFTLIIVEKSN 250 (337)
T ss_dssp CEEEEEEECCC
T ss_pred eEEEEEEccCC
Confidence 99999999863
No 3
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=100.00 E-value=2.4e-35 Score=295.05 Aligned_cols=226 Identities=18% Similarity=0.154 Sum_probs=165.0
Q ss_pred CCcEEEEEcCccCCCChHHHHHHHHHhhccCce-EEeec-cCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 014315 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGE-KAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 158 (427)
Q Consensus 81 ~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv-~dl~~-~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGD 158 (427)
+++++||+||.||++ +.++.+.+.|....+ +.+.. ..++++.+ +.+.+. ..+.+.|||+|||
T Consensus 29 ~~~~~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~~~~~~~-~~~~~~------------~~~~d~vvv~GGD 92 (332)
T 2bon_A 29 FPASLLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWEKGDAAR-YVEEAR------------KFGVATVIAGGGD 92 (332)
T ss_dssp -CCEEEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCSTTHHHH-HHHHHH------------HHTCSEEEEEESH
T ss_pred cceEEEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecCcchHHH-HHHHHH------------hcCCCEEEEEccc
Confidence 467999999999987 567777777765432 33332 34555433 222211 0235789999999
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEeeeecCCCCC
Q 014315 159 GTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILMRMKAPKEG 238 (427)
Q Consensus 159 GTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~~~~~~~~g 238 (427)
|||+||++++.+......+|||+||+||+|||||.|||+. +++++++.|.+++.+++|+|+++-
T Consensus 93 GTl~~v~~~l~~~~~~~~~plgiiP~Gt~N~fa~~l~i~~--------~~~~al~~i~~g~~~~iDlg~v~~-------- 156 (332)
T 2bon_A 93 GTINEVSTALIQCEGDDIPALGILPLGTANDFATSVGIPE--------ALDKALKLAIAGDAIAIDMAQVNK-------- 156 (332)
T ss_dssp HHHHHHHHHHHHCCSSCCCEEEEEECSSSCHHHHHTTCCS--------SHHHHHHHHHHSEEEEEEEEEETT--------
T ss_pred hHHHHHHHHHhhcccCCCCeEEEecCcCHHHHHHhcCCCC--------CHHHHHHHHHcCCeEEeeEEEECC--------
Confidence 9999999999853213578999999999999999999986 578889999999999999999840
Q ss_pred CCCCCCCCCCCcccccccccccccccccCCcceeccceeeeeccChhHHHHHHHhhccccCccchhcccchhhHHHHHHH
Q 014315 239 SFDPIAPLELPHSLHAFHRVSQKDKLNVEGHHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFQNQLVNQSTYLKLAG 318 (427)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~r~F~NyfsIG~DA~V~~~f~~~R~~~p~~f~srl~nkl~Y~~~g~ 318 (427)
+++|+|++|+|+||+|+..++..+ ++..|+++|++.++
T Consensus 157 ----------------------------------r~~fl~~~~~G~da~v~~~~~~~~--------k~~~G~~~Y~~~~l 194 (332)
T 2bon_A 157 ----------------------------------QTCFINMATGGFGTRITTETPEKL--------KAALGSVSYIIHGL 194 (332)
T ss_dssp ----------------------------------SCEESSEEEEEEEEEC------------------CCHHHHHHHHHT
T ss_pred ----------------------------------ceEEEEEEeECccHHHHHHhhHHh--------HhcccHHHHHHHHH
Confidence 027999999999999998876433 34569999999998
Q ss_pred hhhcccccccCCCCcCcCceEEEEEEecCCcEEEEeecCceeEEEEEcCCCCcCCCCCCCCcccccccccCCCCCCCCCC
Q 014315 319 TQGWFLAPLLHPSSRNIAQMAKVKIMKKQGQWEELHIPRYIRSIVCLNLPSFSGGLDPWGKPFRKKLRERGLTPPYVDDG 398 (427)
Q Consensus 319 ~~~~~~~~l~~~~~k~~~~~i~l~v~~~dg~~~~i~l~~~~~~ivv~N~~s~GGG~~~w~~~~~~~~~~~~~~~a~~dDG 398 (427)
+. ++ ..+++ .++|++ ||+ .++ .+...++++|++|+|||+.+|| .++++||
T Consensus 195 ~~------l~--~~~~~--~~~i~~---dg~--~~~--~~~~~v~v~N~~~~ggg~~i~P-------------~a~~~DG 244 (332)
T 2bon_A 195 MR------MD--TLQPD--RCEIRG---ENF--HWQ--GDALVIGIGNGRQAGGGQQLCP-------------NALINDG 244 (332)
T ss_dssp SC------EE--EEECE--EEEEEE---TTE--EEE--EEESEEEEESSSCBTTTBCSCT-------------TCCTTSS
T ss_pred HH------Hh--hCCCe--eEEEEE---CCE--EEE--EEEEEEEEECCCccCCCcccCC-------------CCCCCCC
Confidence 87 43 22332 456666 786 443 2577888999999999999998 5889999
Q ss_pred eEEEEEEecchh
Q 014315 399 LLEIVGFRDAWH 410 (427)
Q Consensus 399 ~LEVv~v~~~~h 410 (427)
+|||++++...+
T Consensus 245 ~Ldv~iv~~~~~ 256 (332)
T 2bon_A 245 LLQLRIFTGDEI 256 (332)
T ss_dssp CEEEEEECCSSC
T ss_pred eEEEEEECCHHH
Confidence 999999998744
No 4
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=98.91 E-value=3.5e-09 Score=103.27 Aligned_cols=124 Identities=10% Similarity=-0.005 Sum_probs=73.3
Q ss_pred CCcEEEEEcCccCCCChHHHHHHHHHhhccCce-EEeeccCchhHHHHHHHHHHHhhhccchhhh--hhccCcEEEEEcC
Q 014315 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFAS--EIEKRLRLIVAGG 157 (427)
Q Consensus 81 ~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv-~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~--~~~~~~~IIv~GG 157 (427)
++++.||+||.++ ...+.+..+.+.|....+ +.+...... .+. ... ...++. .....+.||++||
T Consensus 5 mkki~ii~np~~~--~~~~~~~~i~~~l~~~g~~v~~~~~~~~--------~~~-~~~-~~~~~~~~~~~~~D~vi~~GG 72 (292)
T 2an1_A 5 FKCIGIVGHPRHP--TALTTHEMLYRWLCDQGYEVIVEQQIAH--------ELQ-LKN-VPTGTLAEIGQQADLAVVVGG 72 (292)
T ss_dssp CCEEEEECC---------CHHHHHHHHHHHTTCEEEEEHHHHH--------HTT-CSS-CCEECHHHHHHHCSEEEECSC
T ss_pred CcEEEEEEcCCCH--HHHHHHHHHHHHHHHCCCEEEEecchhh--------hcc-ccc-ccccchhhcccCCCEEEEEcC
Confidence 4789999999864 345667777777765432 222211000 000 000 000000 0123579999999
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEee
Q 014315 158 DGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHILM 230 (427)
Q Consensus 158 DGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~~ 230 (427)
|||++++++.+.+. ..|+||| |+||.|+|++. + +. +++++++.+.+++..--++..++.
T Consensus 73 DGT~l~a~~~~~~~---~~P~lGI-~~Gt~gfla~~-~-~~--------~~~~al~~i~~g~~~~~~r~~l~~ 131 (292)
T 2an1_A 73 DGNMLGAARTLARY---DINVIGI-NRGNLGFLTDL-D-PD--------NALQQLSDVLEGRYISEKRFLLEA 131 (292)
T ss_dssp HHHHHHHHHHHTTS---SCEEEEB-CSSSCCSSCCB-C-TT--------SHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred cHHHHHHHHHhhcC---CCCEEEE-ECCCcccCCcC-C-HH--------HHHHHHHHHHcCCCEEEEeEEEEE
Confidence 99999999999763 2355777 89998888873 4 43 588899999999876556666554
No 5
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=98.73 E-value=9.5e-09 Score=98.87 Aligned_cols=106 Identities=22% Similarity=0.263 Sum_probs=75.0
Q ss_pred cEEEEEcCccCCCChHHHHHHHHHhhccCceEEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHH
Q 014315 83 PVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTAS 162 (427)
Q Consensus 83 ~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGDGTv~ 162 (427)
++.||+||.||.+ +.++++.+.+.|.. +++.. . .+. .....+.||++|||||++
T Consensus 2 ki~ii~Np~~~~~-~~~~~~~i~~~l~~---~~~~~-~-~~~--------------------~~~~~D~vv~~GGDGTll 55 (258)
T 1yt5_A 2 KIAILYREEREKE-GEFLKEKISKEHEV---IEFGE-A-NAP--------------------GRVTADLIVVVGGDGTVL 55 (258)
T ss_dssp EEEEEECGGGHHH-HHHHHHHHTTTSEE---EEEEE-S-SSC--------------------SCBCCSEEEEEECHHHHH
T ss_pred EEEEEEeCCCchH-HHHHHHHHHHHhcC---Cceec-c-ccc--------------------ccCCCCEEEEEeCcHHHH
Confidence 5899999999987 88888888887762 22221 1 000 012458999999999999
Q ss_pred HHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEe
Q 014315 163 WLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 229 (427)
Q Consensus 163 ~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~ 229 (427)
++++.+.. ..|.+|| ++||.+.|+ .+. + .++.++++.+.+++..--++..++
T Consensus 56 ~~a~~~~~----~~PilGI-n~G~~Gfl~-~~~-~--------~~~~~al~~i~~g~~~i~~r~~l~ 107 (258)
T 1yt5_A 56 KAAKKAAD----GTPMVGF-KAGRLGFLT-SYT-L--------DEIDRFLEDLRNWNFREETRWFIQ 107 (258)
T ss_dssp HHHTTBCT----TCEEEEE-ESSSCCSSC-CBC-G--------GGHHHHHHHHHTTCCEEEEEEEEE
T ss_pred HHHHHhCC----CCCEEEE-ECCCCCccC-cCC-H--------HHHHHHHHHHHcCCceEEEEEEEE
Confidence 99998764 2345887 599996666 454 3 268899999999987644555554
No 6
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=98.54 E-value=3.3e-07 Score=88.67 Aligned_cols=102 Identities=10% Similarity=0.050 Sum_probs=71.9
Q ss_pred cEEEEEcCccCCCChHHHHHHHHHhhccCceEEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHH
Q 014315 83 PVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTAS 162 (427)
Q Consensus 83 ~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGDGTv~ 162 (427)
++.||+||+ ..+.++++.+.+.|....+ ++. .+..+.||++|||||+.
T Consensus 2 ki~ii~n~~---~~~~~~~~~l~~~l~~~g~-~v~----------------------------~~~~D~vv~lGGDGT~l 49 (272)
T 2i2c_A 2 KYMITSKGD---EKSDLLRLNMIAGFGEYDM-EYD----------------------------DVEPEIVISIGGDGTFL 49 (272)
T ss_dssp EEEEEECCS---HHHHHHHHHHHHHHTTSSC-EEC----------------------------SSSCSEEEEEESHHHHH
T ss_pred EEEEEECCC---HHHHHHHHHHHHHHHHCCC-EeC----------------------------CCCCCEEEEEcCcHHHH
Confidence 578999963 3456777888887776432 111 01357899999999999
Q ss_pred HHHHHHhcCCCCCCCC-EEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEEe
Q 014315 163 WLLGVVSDLKLPHSPP-VATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 229 (427)
Q Consensus 163 ~Vln~l~~~~~~~~~p-lgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~ 229 (427)
.+++.+.... ..+| +|| |+|| ++|...+. + .+++++++.+.+++...-+++.++
T Consensus 50 ~aa~~~~~~~--~~~PilGI-n~G~-lgfl~~~~-~--------~~~~~~l~~l~~g~~~i~~r~~L~ 104 (272)
T 2i2c_A 50 SAFHQYEERL--DEIAFIGI-HTGH-LGFYADWR-P--------AEADKLVKLLAKGEYQKVSYPLLK 104 (272)
T ss_dssp HHHHHTGGGT--TTCEEEEE-ESSS-CCSSCCBC-G--------GGHHHHHHHHHTTCCEEEEEEEEE
T ss_pred HHHHHHhhcC--CCCCEEEE-eCCC-CCcCCcCC-H--------HHHHHHHHHHHcCCCEEEEEEEEE
Confidence 9999986520 1355 777 9999 66887775 3 268889999999977654555554
No 7
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=98.53 E-value=2.1e-07 Score=91.59 Aligned_cols=128 Identities=17% Similarity=0.161 Sum_probs=74.2
Q ss_pred CCcEEEEEcCccCCCChHHHHHHHHHhhccCce-EEeeccCchhHH--HHHHH-------HHHHhhhccchhhhhhccCc
Q 014315 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVL--HQLYV-------TLEKFKAAGDVFASEIEKRL 150 (427)
Q Consensus 81 ~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv-~dl~~~~p~~~l--~~~~~-------~l~~l~~~gd~~a~~~~~~~ 150 (427)
+++++||+||.++. +.+.+..+.+.|....+ +.+......... ..... .+..... +. ...+..+
T Consensus 4 m~ki~iI~n~~~~~--~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~--~~~~~~d 77 (307)
T 1u0t_A 4 HRSVLLVVHTGRDE--ATETARRVEKVLGDNKIALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDA--DQ--HAADGCE 77 (307)
T ss_dssp -CEEEEEESSSGGG--GSHHHHHHHHHHHTTTCEEEEEC---------------------------------------CC
T ss_pred CCEEEEEEeCCCHH--HHHHHHHHHHHHHHCCCEEEEecchhhhhhccccccccccccccccccccc--cc--ccccCCC
Confidence 47799999999863 45667778777765432 222221111100 00000 0000000 00 0012457
Q ss_pred EEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEEE
Q 014315 151 RLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWHI 228 (427)
Q Consensus 151 ~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V 228 (427)
.||++|||||+.++++.+... ..|.+|| ++||.|.|+. +. + .+++++++.+.+++...-++..+
T Consensus 78 ~vi~~GGDGT~l~a~~~~~~~---~~pvlgi-~~G~~gfl~~-~~-~--------~~~~~~~~~i~~g~~~~~~r~~l 141 (307)
T 1u0t_A 78 LVLVLGGDGTFLRAAELARNA---SIPVLGV-NLGRIGFLAE-AE-A--------EAIDAVLEHVVAQDYRVEDRLTL 141 (307)
T ss_dssp CEEEEECHHHHHHHHHHHHHH---TCCEEEE-ECSSCCSSCS-EE-G--------GGHHHHHHHHHHTCCEEEEECCE
T ss_pred EEEEEeCCHHHHHHHHHhccC---CCCEEEE-eCCCCccCcc-cC-H--------HHHHHHHHHHHcCCcEEEEEEEE
Confidence 899999999999999998753 2345775 8999999985 42 3 26888999999988765455444
No 8
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=98.04 E-value=1.8e-05 Score=80.41 Aligned_cols=160 Identities=13% Similarity=0.141 Sum_probs=88.3
Q ss_pred CccccccccccccCceeecCCccc-ccCCCCCCcEEEEEcCccCCCChHHHHHHHHHhhccC--ce-EEeeccCchhHHH
Q 014315 51 TPKSKILNNYYIPNYILVSGSEVQ-RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QV-IDLGEKAPDKVLH 126 (427)
Q Consensus 51 ~~~~~~~~~~~ip~~~~~~~~~~~-~~~~~~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~--qv-~dl~~~~p~~~l~ 126 (427)
...|..|+.-..|.|+-.|.++.. +.-..+++.++||+||.. ....+.+..+.+.|... .+ +.+.. ...+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~k~V~II~n~~~--~~~~~~~~~l~~~L~~~~~gi~V~ve~-~~a~~-- 84 (388)
T 3afo_A 10 IKPVNNLRSSSSADFVSPPNSKLQSLIWQNPLQNVYITKKPWT--PSTREAMVEFITHLHESYPEVNVIVQP-DVAEE-- 84 (388)
T ss_dssp EEEGGGSCCCCCCEEEC----CCEEEECSSCCCEEEEEECTTC--HHHHHHHHHHHHHHHHHCTTCEEECCH-HHHHH--
T ss_pred eeeHhhcCcccCcceEeCcchhheeeEccCCCcEEEEEEeCCC--HHHHHHHHHHHHHHHHhCCCeEEEEeC-chhhh--
Confidence 345777888788888888776532 222345688999999874 34556677777766543 22 22221 11111
Q ss_pred HHHHHHHHh-hh----c----cchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCC
Q 014315 127 QLYVTLEKF-KA----A----GDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWG 197 (427)
Q Consensus 127 ~~~~~l~~l-~~----~----gd~~a~~~~~~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~ 197 (427)
+...+... .. . ........+..+.||++|||||+..++..+.... .+|.||| ++||-+-|+. +..
T Consensus 85 -l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DlVIvlGGDGTlL~aa~~~~~~~--vpPiLGI-N~G~lGFLt~-~~~- 158 (388)
T 3afo_A 85 -ISQDFKSPLENDPNRPHILYTGPEQDIVNRTDLLVTLGGDGTILHGVSMFGNTQ--VPPVLAF-ALGTLGFLSP-FDF- 158 (388)
T ss_dssp -HHTTCCSCGGGCTTSCEEEEECCHHHHHHHCSEEEEEESHHHHHHHHHTTTTSC--CCCEEEE-ECSSCCSSCC-EEG-
T ss_pred -hhhhccccccccccccccccccchhhcccCCCEEEEEeCcHHHHHHHHHhcccC--CCeEEEE-ECCCcccCCc-CCh-
Confidence 00000000 00 0 0000000124589999999999999998876421 1244666 9999755543 432
Q ss_pred CCCCCCchHHHHHHHHHHHcCCeEEEEEEEEe
Q 014315 198 KKNPNTDQQAVLSFLEQVKNAKEMQIDSWHIL 229 (427)
Q Consensus 198 ~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~V~ 229 (427)
++++++++.+.+++.....+-.+.
T Consensus 159 --------~~~~~al~~il~g~~~~~~r~~L~ 182 (388)
T 3afo_A 159 --------KEHKKVFQEVISSRAKCLHRTRLE 182 (388)
T ss_dssp --------GGHHHHHHHHHTTCCEEEEECCEE
T ss_pred --------HHHHHHHHHHhcCCceEEEeeEEE
Confidence 368889999999976544444443
No 9
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=94.16 E-value=0.074 Score=51.36 Aligned_cols=36 Identities=25% Similarity=0.386 Sum_probs=25.7
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCc
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGN 188 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGN 188 (427)
..+.||++|||||+-.++..+.. . +||--|.+||=+
T Consensus 68 ~~DlvIvlGGDGT~L~aa~~~~~----~-~PilGIN~G~lG 103 (278)
T 1z0s_A 68 NFDFIVSVGGDGTILRILQKLKR----C-PPIFGINTGRVG 103 (278)
T ss_dssp GSSEEEEEECHHHHHHHHTTCSS----C-CCEEEEECSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHhCC----C-CcEEEECCCCCc
Confidence 35789999999999888665532 3 666666777533
No 10
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=90.33 E-value=0.48 Score=47.41 Aligned_cols=66 Identities=24% Similarity=0.290 Sum_probs=41.7
Q ss_pred cCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHcCCeEEEEEEE
Q 014315 148 KRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKNAKEMQIDSWH 227 (427)
Q Consensus 148 ~~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~a~~~~iD~w~ 227 (427)
..+.||+.|||||+-.++..+.. ..+||-=|-+| .||.=... ..++++++|+.+.+++..--.+..
T Consensus 108 ~~DlvI~lGGDGT~L~aa~~~~~----~~~PvlGiN~G-------~LGFLt~~---~~~~~~~~l~~vl~g~~~v~~R~~ 173 (365)
T 3pfn_A 108 QIDFIICLGGDGTLLYASSLFQG----SVPPVMAFHLG-------SLGFLTPF---SFENFQSQVTQVIEGNAAVVLRSR 173 (365)
T ss_dssp TCSEEEEESSTTHHHHHHHHCSS----SCCCEEEEESS-------SCTTTCCE---ESTTHHHHHHHHHHSCCBEEEECC
T ss_pred CCCEEEEEcChHHHHHHHHHhcc----CCCCEEEEcCC-------CCccceee---cHHHHHHHHHHHHcCCCeEEEEee
Confidence 46789999999999988886653 24554333344 34432211 224688899999988765433333
No 11
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=83.73 E-value=3.8 Score=40.48 Aligned_cols=105 Identities=15% Similarity=0.125 Sum_probs=56.9
Q ss_pred ccCceeecCCcc-c---ccCCCCCCcEEEEEcCccCCCChHHHHHHHHHhhccCceEEeeccCchhHHHHHHHHHHHhhh
Q 014315 62 IPNYILVSGSEV-Q---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKA 137 (427)
Q Consensus 62 ip~~~~~~~~~~-~---~~~~~~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv~dl~~~~p~~~l~~~~~~l~~l~~ 137 (427)
.|+.++...... . .......++++|+..+.. ..+.+.+.+.|....+.......|..-++.+.+.++.+.+
T Consensus 11 ~p~~i~~G~g~~~~l~~~l~~~g~~r~liVtd~~~-----~~~~~~v~~~L~~~~~~v~~~v~~~p~~~~v~~~~~~~~~ 85 (353)
T 3hl0_A 11 APARIVFSAGSSADVAEEIRRLGLSRALVLSTPQQ-----KGDAEALASRLGRLAAGVFSEAAMHTPVEVTKTAVEAYRA 85 (353)
T ss_dssp CCCCEEECTTGGGGHHHHHHHTTCCCEEEECCGGG-----HHHHHHHHHHHGGGEEEEECCCCTTCBHHHHHHHHHHHHH
T ss_pred CCceEEECcCHHHHHHHHHHHhCCCEEEEEecCch-----hhHHHHHHHHHhhCCcEEecCcCCCCcHHHHHHHHHHHhc
Confidence 677766654321 1 111222367888877642 2356777777765433222221222222222232221111
Q ss_pred ccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeC
Q 014315 138 AGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (427)
Q Consensus 138 ~gd~~a~~~~~~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPl 184 (427)
.+.+.||++|| |++..+...+.-. ..+|+..||.
T Consensus 86 ---------~~~D~IIavGG-Gs~iD~aK~iA~~---~~~p~i~IPT 119 (353)
T 3hl0_A 86 ---------AGADCVVSLGG-GSTTGLGKAIALR---TDAAQIVIPT 119 (353)
T ss_dssp ---------TTCSEEEEEES-HHHHHHHHHHHHH---HCCEEEEEEC
T ss_pred ---------cCCCEEEEeCC-cHHHHHHHHHHhc---cCCCEEEEeC
Confidence 24578999999 8998888876542 3688999997
No 12
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=78.30 E-value=7.1 Score=38.58 Aligned_cols=105 Identities=10% Similarity=0.069 Sum_probs=56.5
Q ss_pred ccCceeecCCcc-c---ccCCCCCCcEEEEEcCccCCCChHHHHHHHHHhhccCceEEeeccCchhHHHHHHHHHHHhhh
Q 014315 62 IPNYILVSGSEV-Q---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKA 137 (427)
Q Consensus 62 ip~~~~~~~~~~-~---~~~~~~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv~dl~~~~p~~~l~~~~~~l~~l~~ 137 (427)
.|..++...... . .......++++|+..+.. ..+.+.+.+.|....+.......|..-.+.+.+.++.+.+
T Consensus 13 ~p~~i~~G~g~~~~l~~~l~~~g~~r~liVtd~~~-----~~~~~~v~~~L~~~~~~~f~~v~~~p~~~~v~~~~~~~~~ 87 (358)
T 3jzd_A 13 HAARVVFGAGSSSQVAAEVERLGAKRALVLCTPNQ-----QAEAERIADLLGPLSAGVYAGAVMHVPIESARDATARARE 87 (358)
T ss_dssp CCEEEEESTTGGGGHHHHHHHTTCSCEEEECCGGG-----HHHHHHHHHHHGGGEEEEECCCCTTCBHHHHHHHHHHHHH
T ss_pred CCceEEECCCHHHHHHHHHHHhCCCeEEEEeCCcH-----HHHHHHHHHHhccCCEEEecCCcCCCCHHHHHHHHHHhhc
Confidence 576666544321 1 111122367888876643 2356777777765433222222222222222222221111
Q ss_pred ccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeC
Q 014315 138 AGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (427)
Q Consensus 138 ~gd~~a~~~~~~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPl 184 (427)
.+.+.||++|| |++..+...+... ..+|+..||.
T Consensus 88 ---------~~~D~IIavGG-GsviD~aK~iA~~---~~~p~i~IPT 121 (358)
T 3jzd_A 88 ---------AGADCAVAVGG-GSTTGLGKAIALE---TGMPIVAIPT 121 (358)
T ss_dssp ---------HTCSEEEEEES-HHHHHHHHHHHHH---HCCCEEEEEC
T ss_pred ---------cCCCEEEEeCC-cHHHHHHHHHHhc---cCCCEEEEeC
Confidence 24578999999 8998888876542 3578888887
No 13
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=76.53 E-value=3.5 Score=41.31 Aligned_cols=107 Identities=12% Similarity=0.043 Sum_probs=57.9
Q ss_pred cccccccCceeecCCcc-c---ccCCCCCCcEEEEEcCccCCCChHHHHHHHHHhhcc-Cc-eEEeecc-CchhHHHHHH
Q 014315 57 LNNYYIPNYILVSGSEV-Q---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNE-NQ-VIDLGEK-APDKVLHQLY 129 (427)
Q Consensus 57 ~~~~~ip~~~~~~~~~~-~---~~~~~~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~-~q-v~dl~~~-~p~~~l~~~~ 129 (427)
.+.|..|+.++...... . ...... ++++||..+..- ..+.+.+.+.|.. .+ +|+.... .+.+.++.+.
T Consensus 25 ~~~f~~p~~i~~G~g~l~~l~~~l~~~g-~r~liVtd~~~~----~~~~~~v~~~L~~g~~~~~~~~~~~p~~~~v~~~~ 99 (387)
T 3uhj_A 25 ARAFGGPNKYIQRAGEIDKLAAYLAPLG-KRALVLIDRVLF----DALSERIGKSCGDSLDIRFERFGGECCTSEIERVR 99 (387)
T ss_dssp EEEEECCSEEEECTTTTTTTHHHHGGGC-SEEEEEECTTTH----HHHHHHC------CCEEEEEECCSSCSHHHHHHHH
T ss_pred hhHhcCCCeEEEcCCHHHHHHHHHHHcC-CEEEEEECchHH----HHHHHHHHHHHHcCCCeEEEEcCCCCCHHHHHHHH
Confidence 46688888877655321 1 111222 778888876553 2356666666664 22 2333222 2223332222
Q ss_pred HHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeC
Q 014315 130 VTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (427)
Q Consensus 130 ~~l~~l~~~gd~~a~~~~~~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPl 184 (427)
+.+ .+ .+.+.||++|| |++..+...+.-. ..+|+..||.
T Consensus 100 ~~~---~~---------~~~d~IIavGG-Gs~~D~AK~iA~~---~~~p~i~IPT 138 (387)
T 3uhj_A 100 KVA---IE---------HGSDILVGVGG-GKTADTAKIVAID---TGARIVIAPT 138 (387)
T ss_dssp HHH---HH---------HTCSEEEEESS-HHHHHHHHHHHHH---TTCEEEECCS
T ss_pred HHH---hh---------cCCCEEEEeCC-cHHHHHHHHHHHh---cCCCEEEecC
Confidence 221 11 23578999999 8998888877643 3688999997
No 14
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=75.92 E-value=17 Score=36.25 Aligned_cols=120 Identities=18% Similarity=0.210 Sum_probs=62.2
Q ss_pred ccccCceeecCCc-c---cccCCCCCCcEEEEEcCccCCCChHHHHHHHHHhhccCceEEeeccCchhHHHHHHHHHHHh
Q 014315 60 YYIPNYILVSGSE-V---QRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKF 135 (427)
Q Consensus 60 ~~ip~~~~~~~~~-~---~~~~~~~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv~dl~~~~p~~~l~~~~~~l~~l 135 (427)
|..|..++..... . .... . .++++|+..+.+-. ...+.+.+.+.|...+++.+....|...++.+.+.++.+
T Consensus 27 ~~~p~~i~~G~g~l~~l~~~l~-~-g~r~liVtd~~~~~--~~g~~~~v~~~L~g~~~~~f~~v~~~p~~~~v~~~~~~~ 102 (408)
T 1oj7_A 27 LHTPTRILFGKGAIAGLREQIP-H-DARVLITYGGGSVK--KTGVLDQVLDALKGMDVLEFGGIEPNPAYETLMNAVKLV 102 (408)
T ss_dssp EEEEEEEEESTTGGGGHHHHSC-T-TCEEEEEECSSHHH--HHSHHHHHHHHTTTSEEEEECCCCSSCBHHHHHHHHHHH
T ss_pred ecCCCeEEECCCHHHHHHHHHh-c-CCEEEEEECCchhh--hccHHHHHHHHhCCCEEEEeCCcCCCcCHHHHHHHHHHH
Confidence 4557766654322 1 1112 2 27888888654311 111567777777533333333222222222233322221
Q ss_pred hhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCC------------------CCCCCCEEEEeC--CCCcchhhh
Q 014315 136 KAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLK------------------LPHSPPVATVPL--GTGNNIPFS 193 (427)
Q Consensus 136 ~~~gd~~a~~~~~~~~IIv~GGDGTv~~Vln~l~~~~------------------~~~~~plgiIPl--GTGNDfAR~ 193 (427)
.+ .+.+.||++|| |++..+...+.-.- ....+|+..||. |||-.....
T Consensus 103 ~~---------~~~D~IIavGG-GsviD~AK~iA~~~~~~~~~~~~d~~~~~~~~~~~~~p~i~IPTTagtgSevt~~ 170 (408)
T 1oj7_A 103 RE---------QKVTFLLAVGG-GSVLDGTKFIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESNAG 170 (408)
T ss_dssp HH---------HTCCEEEEEES-HHHHHHHHHHHHHTTSCTTSCTTHHHHTTTTTCCCCCCEEEEESSCSSCGGGSSE
T ss_pred HH---------cCCCEEEEeCC-chHHHHHHHHHHHHhCCCCCCHHHHhccccCcCCCCCCEEEEeCCCchhHHhCCC
Confidence 11 23578999998 88888777664320 014589999997 666555443
No 15
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A*
Probab=74.87 E-value=4.8 Score=39.84 Aligned_cols=92 Identities=16% Similarity=0.202 Sum_probs=52.9
Q ss_pred CCcEEEEEcCccCCCChHHHHHHHHHhhccC-ce--EEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 014315 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNEN-QV--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (427)
Q Consensus 81 ~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~-qv--~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GG 157 (427)
.++++|+.++.... ...+.+.+.|... ++ +.+....+.+.++.+.+.++.+.+.+ ..+.+.||++||
T Consensus 34 ~~k~liVtd~~v~~----~~~~~v~~~L~~~~~~~~~~~~~ge~~k~~~~v~~~~~~~~~~~------~~r~d~iIalGG 103 (368)
T 2gru_A 34 FDQYIMISDSGVPD----SIVHYAAEYFGKLAPVHILRFQGGEEYKTLSTVTNLQERAIALG------ANRRTAIVAVGG 103 (368)
T ss_dssp CSEEEEEEETTSCH----HHHHHHHHHHTTTSCEEEEEECCSGGGCSHHHHHHHHHHHHHTT------CCTTEEEEEEES
T ss_pred CCEEEEEECCcHHH----HHHHHHHHHHHhccceeEEEeCCCCCCCCHHHHHHHHHHHHhcC------CCCCcEEEEECC
Confidence 46899999876542 2566667666542 33 33333223333333333332222111 123578888888
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEEeC
Q 014315 158 DGTASWLLGVVSDLKLPHSPPVATVPL 184 (427)
Q Consensus 158 DGTv~~Vln~l~~~~~~~~~plgiIPl 184 (427)
|++..+...+...- ...+|+..||.
T Consensus 104 -Gsv~D~ak~~Aa~~-~rgip~i~IPT 128 (368)
T 2gru_A 104 -GLTGNVAGVAAGMM-FRGIALIHVPT 128 (368)
T ss_dssp -HHHHHHHHHHHHHB-TTCCEEEEEEC
T ss_pred -hHHHHHHHHHHHHh-cCCCCEEEECC
Confidence 88988888776321 24689999998
No 16
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=72.89 E-value=34 Score=33.60 Aligned_cols=119 Identities=23% Similarity=0.354 Sum_probs=59.3
Q ss_pred cccccCceeecCCc----ccccCCCCCCcEEEEEcCccCCCChHHHHHHHHHhhcc--Cc--eEEeeccCchhHHHHHHH
Q 014315 59 NYYIPNYILVSGSE----VQRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNE--NQ--VIDLGEKAPDKVLHQLYV 130 (427)
Q Consensus 59 ~~~ip~~~~~~~~~----~~~~~~~~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~--~q--v~dl~~~~p~~~l~~~~~ 130 (427)
.|..|..++..... ........ ++++|+..+.+-...+ +++.+.+.|.. .. +|+-.+..|. ++.+.+
T Consensus 15 ~~~~p~~i~~G~g~~~~l~~~l~~~g-~~~liVtd~~~~~~~g--~~~~v~~~L~~~g~~~~~~~~~~~~p~--~~~v~~ 89 (371)
T 1o2d_A 15 EFYMPTDVFFGEKILEKRGNIIDLLG-KRALVVTGKSSSKKNG--SLDDLKKLLDETEISYEIFDEVEENPS--FDNVMK 89 (371)
T ss_dssp CCCCCCEEEESTTHHHHHGGGGGGTC-SEEEEEEESSGGGTSS--HHHHHHHHHHHTTCEEEEEEEECSSCB--HHHHHH
T ss_pred EecCCceEEECcCHHHHHHHHHHHcC-CEEEEEECchHHhhcc--HHHHHHHHHHHcCCeEEEeCCccCCCC--HHHHHH
Confidence 45556666554322 11111122 7899999875432221 34455555532 22 2332222222 222223
Q ss_pred HHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCC---------------CCCCEEEEeC--CCCcchhh
Q 014315 131 TLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLP---------------HSPPVATVPL--GTGNNIPF 192 (427)
Q Consensus 131 ~l~~l~~~gd~~a~~~~~~~~IIv~GGDGTv~~Vln~l~~~~~~---------------~~~plgiIPl--GTGNDfAR 192 (427)
.++.+.+ .+.+.||++|| |++..+...+...-.. ..+|+..||. |||-..+.
T Consensus 90 ~~~~~~~---------~~~d~IIavGG-Gsv~D~AK~iA~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTTagtgse~t~ 158 (371)
T 1o2d_A 90 AVERYRN---------DSFDFVVGLGG-GSPMDFAKAVAVLLKEKDLSVEDLYDREKVKHWLPVVEIPTTAGTGSEVTP 158 (371)
T ss_dssp HHHHHTT---------SCCSEEEEEES-HHHHHHHHHHHHHTTSTTCCSGGGGCGGGCCCCCCEEEEECSSCCCGGGCC
T ss_pred HHHHHHh---------cCCCEEEEeCC-hHHHHHHHHHHHHHhCCCCCHHHHhcccCCCCCCeEEEEeCCCchhhhhcC
Confidence 2222111 24578999988 7888877766432111 4689999996 45544443
No 17
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}
Probab=70.78 E-value=10 Score=38.02 Aligned_cols=93 Identities=17% Similarity=0.221 Sum_probs=51.8
Q ss_pred CCCcEEEEEcCccCCCChHHHHHHHHHhhccC--ce--EEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEE
Q 014315 80 PSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QV--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVA 155 (427)
Q Consensus 80 ~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~--qv--~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~ 155 (427)
..++++|+.++... ..+.+.+.+.|... ++ +.+....+.+.++.+.+.++.+.+. ...+.+.||++
T Consensus 61 ~~~rvlIVtd~~v~----~~~~~~v~~~L~~~g~~~~~~~~~~gE~~kt~~~v~~~~~~l~~~------~~~R~d~IIAv 130 (390)
T 3okf_A 61 AKQKVVIVTNHTVA----PLYAPAIISLLDHIGCQHALLELPDGEQYKTLETFNTVMSFLLEH------NYSRDVVVIAL 130 (390)
T ss_dssp TTCEEEEEEETTTH----HHHHHHHHHHHHHHTCEEEEEEECSSGGGCBHHHHHHHHHHHHHT------TCCTTCEEEEE
T ss_pred CCCEEEEEECCcHH----HHHHHHHHHHHHHcCCeEEEEEECCCcCCchHHHHHHHHHHHHhc------CCCcCcEEEEE
Confidence 35789999987654 33666677666542 22 3333322322232233332222211 12234678888
Q ss_pred cCchHHHHHHHHHhcCCCCCCCCEEEEeC
Q 014315 156 GGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (427)
Q Consensus 156 GGDGTv~~Vln~l~~~~~~~~~plgiIPl 184 (427)
|| |++..+...+...- ...+|+..||.
T Consensus 131 GG-Gsv~D~ak~~Aa~~-~rgip~I~IPT 157 (390)
T 3okf_A 131 GG-GVIGDLVGFAAACY-QRGVDFIQIPT 157 (390)
T ss_dssp ES-HHHHHHHHHHHHHB-TTCCEEEEEEC
T ss_pred CC-cHHhhHHHHHHHHh-cCCCCEEEeCC
Confidence 88 88888888764211 24688999998
No 18
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=69.68 E-value=22 Score=31.59 Aligned_cols=31 Identities=19% Similarity=0.340 Sum_probs=23.7
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCC
Q 014315 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGT 186 (427)
Q Consensus 150 ~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGT 186 (427)
..|.++||.|-+--|+.++.. .|.||+ |.-+
T Consensus 70 ViIa~AG~aahLpgvvA~~t~-----~PVIgV-Pv~~ 100 (173)
T 4grd_A 70 AIIAGAGGAAHLPGMLAAKTT-----VPVLGV-PVAS 100 (173)
T ss_dssp EEEEEEESSCCHHHHHHHHCC-----SCEEEE-EECC
T ss_pred EEEEeccccccchhhheecCC-----CCEEEE-EcCC
Confidence 567789999999999999863 456665 6543
No 19
>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, O form J, domain movement, cyclase, lyase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A*
Probab=65.08 E-value=4.7 Score=40.29 Aligned_cols=41 Identities=22% Similarity=0.182 Sum_probs=30.8
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeC--CCCcchh
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL--GTGNNIP 191 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPl--GTGNDfA 191 (427)
.+.||++|| |++..+...+...- ...+|+..||. ||+.|-+
T Consensus 106 ~d~iIalGG-Gsv~D~ak~~Aa~~-~rgip~i~IPTTlla~~das 148 (393)
T 1sg6_A 106 DTVVIALGG-GVIGDLTGFVASTY-MRGVRYVQVPTTLLAMVDSS 148 (393)
T ss_dssp TCEEEEEES-HHHHHHHHHHHHHG-GGCCEEEEEECSHHHHHTTT
T ss_pred CCEEEEECC-cHHHHHHHHHHHHh-cCCCCEEEECCchhhhhhcC
Confidence 378888888 88888887765310 14689999999 8888874
No 20
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=63.23 E-value=17 Score=35.87 Aligned_cols=84 Identities=14% Similarity=0.098 Sum_probs=48.9
Q ss_pred CCcEEEEEcCccCCCChHHHHHHHHHhhccCceEEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchH
Q 014315 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQVIDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGT 160 (427)
Q Consensus 81 ~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGDGT 160 (427)
.++++|+..+.. ..+.+.+.+.|....+|+-....|. .+.+.+.++.+.+ .+.+.||++|| |+
T Consensus 37 ~~rvliVtd~~~-----~~~~~~v~~~L~~~~~f~~v~~~p~--~~~v~~~~~~~~~---------~~~D~IIavGG-Gs 99 (364)
T 3iv7_A 37 SAKVMVIAGERE-----MSIAHKVASEIEVAIWHDEVVMHVP--IEVAERARAVATD---------NEIDLLVCVGG-GS 99 (364)
T ss_dssp CSSEEEECCGGG-----HHHHHHHTTTSCCSEEECCCCTTCB--HHHHHHHHHHHHH---------TTCCEEEEEES-HH
T ss_pred CCEEEEEECCCH-----HHHHHHHHHHcCCCEEEcceecCCC--HHHHHHHHHHHHh---------cCCCEEEEeCC-cH
Confidence 367888876542 2356777777764434443222222 2222232221111 24578999999 88
Q ss_pred HHHHHHHHhcCCCCCCCCEEEEeC
Q 014315 161 ASWLLGVVSDLKLPHSPPVATVPL 184 (427)
Q Consensus 161 v~~Vln~l~~~~~~~~~plgiIPl 184 (427)
+..+...+... ..+|+..||.
T Consensus 100 ~iD~aK~iA~~---~~~P~i~IPT 120 (364)
T 3iv7_A 100 TIGLAKAIAMT---TALPIVAIPT 120 (364)
T ss_dssp HHHHHHHHHHH---HCCCEEEEEC
T ss_pred HHHHHHHHHhc---cCCCEEEEcC
Confidence 88888776542 3588999997
No 21
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A
Probab=62.53 E-value=20 Score=35.61 Aligned_cols=90 Identities=19% Similarity=0.213 Sum_probs=49.8
Q ss_pred CcEEEEEcCccCCCChHHHHHHHHHhhccC--ce--EEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 014315 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QV--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (427)
Q Consensus 82 ~~v~vivNp~SG~~~g~~~~~~~~~~L~~~--qv--~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GG 157 (427)
++++|+.++.... +.+.+.+.|... ++ +.+....+.+.++.+.+.++.+.+.+ ..+.+.||++||
T Consensus 44 ~rvlIVtd~~v~~-----~~~~v~~~L~~~g~~~~~~~~~~gE~~kt~~~v~~~~~~l~~~~------~~r~d~IIavGG 112 (368)
T 3qbe_A 44 HKVAVVHQPGLAE-----TAEEIRKRLAGKGVDAHRIEIPDAEAGKDLPVVGFIWEVLGRIG------IGRKDALVSLGG 112 (368)
T ss_dssp SEEEEEECGGGHH-----HHHHHHHHHHHTTCEEEEEECCSGGGGGBHHHHHHHHHHHHHHT------CCTTCEEEEEES
T ss_pred CEEEEEECccHHH-----HHHHHHHHHHhcCCcceEEEeCCCCCCCCHHHHHHHHHHHHHcC------CCCCcEEEEECC
Confidence 7899999876532 355666666542 22 33333233332322333222222111 124578899988
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEEeC
Q 014315 158 DGTASWLLGVVSDLKLPHSPPVATVPL 184 (427)
Q Consensus 158 DGTv~~Vln~l~~~~~~~~~plgiIPl 184 (427)
|++..+...+...- ...+|+..||.
T Consensus 113 -Gsv~D~ak~~Aa~~-~rgip~i~IPT 137 (368)
T 3qbe_A 113 -GAATDVAGFAAATW-LRGVSIVHLPT 137 (368)
T ss_dssp -HHHHHHHHHHHHHG-GGCCEEEEEEC
T ss_pred -hHHHHHHHHHHHHh-ccCCcEEEECC
Confidence 88888887765310 13688999996
No 22
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=61.12 E-value=23 Score=35.12 Aligned_cols=118 Identities=15% Similarity=0.178 Sum_probs=60.8
Q ss_pred cccccCceeecCCcc----cccCCCCCCcEEEEEcCccCCCChHHHHHHHHHhhccC--c--eEEeeccCchhHHHHHHH
Q 014315 59 NYYIPNYILVSGSEV----QRSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--Q--VIDLGEKAPDKVLHQLYV 130 (427)
Q Consensus 59 ~~~ip~~~~~~~~~~----~~~~~~~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~--q--v~dl~~~~p~~~l~~~~~ 130 (427)
.|..|+.++...... ........++++|+..+.-- ...+.+.+.+.|... + +|+-....|. ++.+.+
T Consensus 5 ~f~~p~~i~~G~g~~~~l~~~~~~~g~~~~liVtd~~~~---~~g~~~~v~~~L~~~gi~~~~~~~v~~~p~--~~~v~~ 79 (383)
T 3ox4_A 5 TFYIPFVNEMGEGSLEKAIKDLNGSGFKNALIVSDAFMN---KSGVVKQVADLLKAQGINSAVYDGVMPNPT--VTAVLE 79 (383)
T ss_dssp EEECCSEEEESTTHHHHHHHTTTTSCCCEEEEEEEHHHH---HTTHHHHHHHHHHTTTCEEEEEEEECSSCB--HHHHHH
T ss_pred eecCCCeEEECCCHHHHHHHHHHHcCCCEEEEEECCchh---hCchHHHHHHHHHHcCCeEEEECCccCCCC--HHHHHH
Confidence 466788776654321 11222234678888875321 112456666666543 2 3432222222 222223
Q ss_pred HHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCC---------------CCCCCCEEEEeC--CCCcchh
Q 014315 131 TLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLK---------------LPHSPPVATVPL--GTGNNIP 191 (427)
Q Consensus 131 ~l~~l~~~gd~~a~~~~~~~~IIv~GGDGTv~~Vln~l~~~~---------------~~~~~plgiIPl--GTGNDfA 191 (427)
.++.+.+ .+.+.||++|| |++..+...+.-.- ....+|+..||. |||-...
T Consensus 80 ~~~~~~~---------~~~D~IIavGG-Gsv~D~aK~ia~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTagtgSe~t 147 (383)
T 3ox4_A 80 GLKILKD---------NNSDFVISLGG-GSPHDCAKAIALVATNGGEVKDYEGIDKSKKPALPLMSINTTAGTASEMT 147 (383)
T ss_dssp HHHHHHH---------HTCSEEEEEES-HHHHHHHHHHHHHHHSCSSGGGGCEESCCSSCCSCEEEEECSSSCCTTTC
T ss_pred HHHHHHh---------cCcCEEEEeCC-cHHHHHHHHHHHHHhCCCCHHHHhcccccccCCCCEEEEeCCCCchhhcC
Confidence 2221111 24578999999 88888777653210 023689999997 5544443
No 23
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe}
Probab=61.03 E-value=13 Score=37.95 Aligned_cols=111 Identities=12% Similarity=0.020 Sum_probs=61.1
Q ss_pred cccccccccccCceeecCCc-cc---ccCCCCCCcEEEEEcCccCCCChHHHHHHHHHhhccC--ce-EEeecc-CchhH
Q 014315 53 KSKILNNYYIPNYILVSGSE-VQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QV-IDLGEK-APDKV 124 (427)
Q Consensus 53 ~~~~~~~~~ip~~~~~~~~~-~~---~~~~~~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~--qv-~dl~~~-~p~~~ 124 (427)
.|.....|..|..++..... .. .......++++|+..+.+-. .+.+.+.+.|... ++ +.+... .+.+.
T Consensus 59 ~~~~~~~f~~p~~i~~G~g~l~~l~~~l~~~g~~rvlIVtd~~~~~----~~~~~v~~~L~~~gi~~~~~~~~ge~~~~~ 134 (450)
T 1ta9_A 59 EESKDRIFTSPQKYVQGRHAFTRSYMYVKKWATKSAVVLADQNVWN----ICANKIVDSLSQNGMTVTKLVFGGEASLVE 134 (450)
T ss_dssp CCCSSEEEECCSEEEEETTGGGGHHHHHTTTCSSEEEEEEEHHHHH----HTHHHHHHHHHHTTCEEEEEEECSCCCHHH
T ss_pred cCccceEEeCCceEEECcCHHHHHHHHHHhcCCCEEEEEECccHHH----HHHHHHHHHHHHCCCeEEEEeeCCCCCHHH
Confidence 45556778888877654432 11 11122234899998765533 2455555555432 22 222222 22222
Q ss_pred HHHHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeC
Q 014315 125 LHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (427)
Q Consensus 125 l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPl 184 (427)
++ +..+ ++++ +.+.||++|| |++..+...+.-. ..+|+..||.
T Consensus 135 v~---~~~~--------~~~~--~~D~IIAvGG-GSviD~AK~iA~~---~giP~I~IPT 177 (450)
T 1ta9_A 135 LD---KLRK--------QCPD--DTQVIIGVGG-GKTMDSAKYIAHS---MNLPSIICPT 177 (450)
T ss_dssp HH---HHHT--------TSCT--TCCEEEEEES-HHHHHHHHHHHHH---TTCCEEEEES
T ss_pred HH---HHHH--------HHhh--CCCEEEEeCC-cHHHHHHHHHHHh---cCCCEEEEeC
Confidence 22 2111 1222 4578999988 8888888877643 3689999997
No 24
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=60.61 E-value=21 Score=35.00 Aligned_cols=106 Identities=13% Similarity=0.039 Sum_probs=57.8
Q ss_pred ccccccCceeecCCc-cc---ccCCCCCCcEEEEEcCccCCCChHHHHHHHHHhhccC--ce-EEeec-cCchhHHHHHH
Q 014315 58 NNYYIPNYILVSGSE-VQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QV-IDLGE-KAPDKVLHQLY 129 (427)
Q Consensus 58 ~~~~ip~~~~~~~~~-~~---~~~~~~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~--qv-~dl~~-~~p~~~l~~~~ 129 (427)
..|..|..++..... .. ...... ++++|+..+.+-. .+.+.+.+.|... ++ +.+.. +.+.+.++.+.
T Consensus 5 ~~~~~p~~i~~G~g~~~~l~~~l~~~g-~~~livtd~~~~~----~~~~~v~~~L~~~g~~~~~~~~~ge~~~~~v~~~~ 79 (370)
T 1jq5_A 5 RVFISPAKYVQGKNVITKIANYLEGIG-NKTVVIADEIVWK----IAGHTIVNELKKGNIAAEEVVFSGEASRNEVERIA 79 (370)
T ss_dssp BCCCCCSEEEEETTGGGGHHHHHTTTC-SEEEEEECHHHHH----HTHHHHHHHHHTTTCEEEEEECCSSCBHHHHHHHH
T ss_pred eEecCCCeEEECcCHHHHHHHHHHHcC-CeEEEEEChHHHH----HHHHHHHHHHHHcCCeEEEEeeCCCCCHHHHHHHH
Confidence 456677766554322 11 111222 7899998765532 2456666666432 22 22222 22332333222
Q ss_pred HHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeC
Q 014315 130 VTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (427)
Q Consensus 130 ~~l~~l~~~gd~~a~~~~~~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPl 184 (427)
+.+ .+ .+.+.||++|| |++..+...+.-. ..+|+..||.
T Consensus 80 ~~~---~~---------~~~d~IIavGG-Gsv~D~aK~iA~~---~~~p~i~IPT 118 (370)
T 1jq5_A 80 NIA---RK---------AEAAIVIGVGG-GKTLDTAKAVADE---LDAYIVIVPT 118 (370)
T ss_dssp HHH---HH---------TTCSEEEEEES-HHHHHHHHHHHHH---HTCEEEEEES
T ss_pred HHH---Hh---------cCCCEEEEeCC-hHHHHHHHHHHHh---cCCCEEEecc
Confidence 221 11 23578999988 8888888777532 3588999997
No 25
>3clh_A 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, DHQS, amino-acid biosynthesis, cytoplasm, lyase, NAD; HET: NAD; 2.40A {Helicobacter pylori}
Probab=56.79 E-value=13 Score=36.34 Aligned_cols=92 Identities=20% Similarity=0.204 Sum_probs=51.2
Q ss_pred CCcEEEEEcCccCCCChHHHHHHHHHhhccCce--EEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 014315 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 158 (427)
Q Consensus 81 ~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv--~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGD 158 (427)
.++++|+.++..... +.+.+.+.|....+ +.+....+.+.++.+.+.++.+.+. ...+.+.||++||
T Consensus 26 ~~~~livtd~~v~~~----~~~~v~~~L~~~~~~~~~~~~~e~~k~~~~v~~~~~~~~~~------~~~r~d~iIavGG- 94 (343)
T 3clh_A 26 KQKALIISDSIVAGL----HLPYLLERLKALEVRVCVIESGEKYKNFHSLERILNNAFEM------QLNRHSLMIALGG- 94 (343)
T ss_dssp SSCEEEEEEHHHHTT----THHHHHTTEECSCEEEEEECSSGGGCSHHHHHHHHHHHHHT------TCCTTCEEEEEES-
T ss_pred CCEEEEEECCcHHHH----HHHHHHHHHHhCCcEEEEeCCCCCCCCHHHHHHHHHHHHhc------CCCCCceEEEECC-
Confidence 467899988765432 46667777754333 3333322322232233333222211 1223478888888
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEEeC
Q 014315 159 GTASWLLGVVSDLKLPHSPPVATVPL 184 (427)
Q Consensus 159 GTv~~Vln~l~~~~~~~~~plgiIPl 184 (427)
|++..+...+...- ...+|+..||.
T Consensus 95 Gsv~D~ak~~A~~~-~rgip~i~IPT 119 (343)
T 3clh_A 95 GVISDMVGFASSIY-FRGIDFINIPT 119 (343)
T ss_dssp HHHHHHHHHHHHHB-TTCCEEEEEEC
T ss_pred hHHHHHHHHHHHHh-ccCCCEEEeCC
Confidence 88888887765211 24688999995
No 26
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=56.02 E-value=22 Score=34.59 Aligned_cols=38 Identities=26% Similarity=0.401 Sum_probs=29.7
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchh
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP 191 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfA 191 (427)
-+.++++|||||+.-+.. |.+. .+++--||-==-||++
T Consensus 95 Id~LvvIGGdgS~~~a~~-L~~~----~i~vvgiPkTIDNDl~ 132 (320)
T 1pfk_A 95 IDALVVIGGDGSYMGAMR-LTEM----GFPCIGLPGTIDNDIK 132 (320)
T ss_dssp CCEEEEEECHHHHHHHHH-HHHT----TCCEEEEEBCTTCCCT
T ss_pred CCEEEEECCCchHHHHHH-HHhh----CCCEEEEeccccCCCC
Confidence 467999999999876543 5442 5788889998899997
No 27
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=55.57 E-value=71 Score=31.31 Aligned_cols=123 Identities=17% Similarity=0.187 Sum_probs=58.7
Q ss_pred cccccCceeecCCc-cc---ccCCCCCCcEEEEEcCccCCCChHHHHHHHHHhhcc--CceEEeeccCchhHHHHHHHHH
Q 014315 59 NYYIPNYILVSGSE-VQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNE--NQVIDLGEKAPDKVLHQLYVTL 132 (427)
Q Consensus 59 ~~~ip~~~~~~~~~-~~---~~~~~~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~--~qv~dl~~~~p~~~l~~~~~~l 132 (427)
.|.+|..++..... .. .......++++|+..+..-... ..+.+.+.+.|.. .++..+....+..-++.+.+.+
T Consensus 7 ~~~~p~~i~~G~g~~~~l~~~l~~~g~~~~livtd~~~~~~~-~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~ 85 (387)
T 3bfj_A 7 DYLVPNVNFFGPNAISVVGERCQLLGGKKALLVTDKGLRAIK-DGAVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGL 85 (387)
T ss_dssp EEECCSEEEESTTGGGGHHHHHHHTTCSEEEEECCTTTC--C-CSSHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHH
T ss_pred eeeCCCeEEECCCHHHHHHHHHHHcCCCEEEEEECcchhhcc-chHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHH
Confidence 35667776654322 11 1111123688999887654320 0134444444432 2232222212222222222322
Q ss_pred HHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcC--------------C-CCCCCCEEEEeC--CCCcchhh
Q 014315 133 EKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDL--------------K-LPHSPPVATVPL--GTGNNIPF 192 (427)
Q Consensus 133 ~~l~~~gd~~a~~~~~~~~IIv~GGDGTv~~Vln~l~~~--------------~-~~~~~plgiIPl--GTGNDfAR 192 (427)
+.+.+ .+.+.||++|| |++..+...+.-. + ....+|+..||. |||-....
T Consensus 86 ~~~~~---------~~~d~IIavGG-Gsv~D~aK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~gtgSevt~ 152 (387)
T 3bfj_A 86 AVFRR---------EQCDIIVTVGG-GSPHDCGKGIGIAATHEGDLYQYAGIETLTNPLPPIVAVNTTAGTASEVTR 152 (387)
T ss_dssp HHHHH---------TTCCEEEEEES-HHHHHHHHHHHHHHHSSSCSGGGCBSSCCCSCCCCEEEEECSTTCCGGGCS
T ss_pred HHHHh---------cCCCEEEEeCC-cchhhHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCCCccccccC
Confidence 22111 23578998988 7888777765421 0 014689999997 55544443
No 28
>1ujn_A Dehydroquinate synthase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.80A {Thermus thermophilus} SCOP: e.22.1.1
Probab=54.36 E-value=26 Score=34.21 Aligned_cols=90 Identities=19% Similarity=0.233 Sum_probs=50.3
Q ss_pred CCcEEEEEcCccCCCChHHHHHHHHHhhccCce-EEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 014315 81 SCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 159 (427)
Q Consensus 81 ~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv-~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGDG 159 (427)
.++++|+.++... . +.+.+.+.|. ..+ +.+....+.+.++.+.+.++.+.+. ...+.+.||++|| |
T Consensus 28 ~~kvliVtd~~v~----~-~~~~v~~~L~-~~~~~~~~~ge~~~~~~~v~~~~~~~~~~------~~~r~d~IIavGG-G 94 (348)
T 1ujn_A 28 AGPAALLFDRRVE----G-FAQEVAKALG-VRHLLGLPGGEAAKSLEVYGKVLSWLAEK------GLPRNATLLVVGG-G 94 (348)
T ss_dssp SSCEEEEEEGGGH----H-HHHHHHHHHT-CCCEEEECCSGGGSSHHHHHHHHHHHHHH------TCCTTCEEEEEES-H
T ss_pred CCEEEEEECCcHH----H-HHHHHHHHhc-cCeEEEECCCCCCCCHHHHHHHHHHHHHc------CCCCCCEEEEECC-c
Confidence 4679999886542 3 6667777665 222 3333222332232233322222211 1123478888888 8
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEEeC
Q 014315 160 TASWLLGVVSDLKLPHSPPVATVPL 184 (427)
Q Consensus 160 Tv~~Vln~l~~~~~~~~~plgiIPl 184 (427)
++..+...+...- ...+|+..||.
T Consensus 95 sv~D~ak~~A~~~-~rgip~i~IPT 118 (348)
T 1ujn_A 95 TLTDLGGFVAATY-LRGVAYLAFPT 118 (348)
T ss_dssp HHHHHHHHHHHHB-TTCCEEEEEEC
T ss_pred HHHHHHHHHHHHh-ccCCCEEEecC
Confidence 8888888775321 24689999997
No 29
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=53.40 E-value=21 Score=34.71 Aligned_cols=86 Identities=17% Similarity=0.130 Sum_probs=49.0
Q ss_pred CcEEEEEcCccCCCChHHHHHHHHHhhccC--ce--EEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcC
Q 014315 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QV--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGG 157 (427)
Q Consensus 82 ~~v~vivNp~SG~~~g~~~~~~~~~~L~~~--qv--~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GG 157 (427)
++++|+..+..-. .+.+.+.+.|... ++ |+- ...| .++.+.+. +.+. + .+.+.||++||
T Consensus 35 ~~~livtd~~~~~----~~~~~v~~~L~~~g~~~~~~~~-~~~~--~~~~v~~~-~~~~--------~-~~~d~IIavGG 97 (354)
T 3ce9_A 35 KRVSLYFGEGIYE----LFGETIEKSIKSSNIEIEAVET-VKNI--DFDEIGTN-AFKI--------P-AEVDALIGIGG 97 (354)
T ss_dssp SEEEEEEETTHHH----HHHHHHHHHHHTTTCEEEEEEE-ECCC--BHHHHHHH-HTTS--------C-TTCCEEEEEES
T ss_pred CeEEEEECccHHH----HHHHHHHHHHHHcCCeEEEEec-CCCC--CHHHHHHH-HHhh--------h-cCCCEEEEECC
Confidence 5899998865532 3456666666432 23 332 2222 22222222 2111 1 24578888888
Q ss_pred chHHHHHHHHHhcCCCCCCCCEEEEeCCCCc
Q 014315 158 DGTASWLLGVVSDLKLPHSPPVATVPLGTGN 188 (427)
Q Consensus 158 DGTv~~Vln~l~~~~~~~~~plgiIPlGTGN 188 (427)
|++..+...+.-. ..+|+..||.=.|.
T Consensus 98 -Gsv~D~aK~vA~~---~~~p~i~IPTT~~t 124 (354)
T 3ce9_A 98 -GKAIDAVKYMAFL---RKLPFISVPTSTSN 124 (354)
T ss_dssp -HHHHHHHHHHHHH---HTCCEEEEESCCSS
T ss_pred -hHHHHHHHHHHhh---cCCCEEEecCcccC
Confidence 8888888776532 36899999974443
No 30
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=49.60 E-value=24 Score=34.34 Aligned_cols=38 Identities=26% Similarity=0.324 Sum_probs=29.5
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchh
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP 191 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfA 191 (427)
-+.++++|||||+.-+.. |.+. .+++--||-==-||++
T Consensus 94 Id~LvvIGGdgS~~~a~~-L~~~----~i~vvgiPkTIDNDl~ 131 (319)
T 1zxx_A 94 IDAVVVIGGDGSYHGALQ-LTRH----GFNSIGLPGTIDNDIP 131 (319)
T ss_dssp CCEEEEEECHHHHHHHHH-HHHT----TCCEEEEEEETTCCCT
T ss_pred CCEEEEECCchHHHHHHH-HHHh----CCCEEEEeecccCCCC
Confidence 467999999999876543 4442 5788889988899997
No 31
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=49.02 E-value=1e+02 Score=27.24 Aligned_cols=30 Identities=13% Similarity=0.151 Sum_probs=22.7
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEe
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVP 183 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIP 183 (427)
...|.++|+.+-+--|+.++.. .|.||+=+
T Consensus 69 ~ViIa~AG~aa~LpgvvA~~t~-----~PVIgVP~ 98 (174)
T 3kuu_A 69 HVIIAGNGGAAHLPGMLAAKTL-----VPVLGVPV 98 (174)
T ss_dssp SEEEEEEESSCCHHHHHHHTCS-----SCEEEEEE
T ss_pred cEEEEECChhhhhHHHHHhccC-----CCEEEeeC
Confidence 3578899999999999998763 45566533
No 32
>3rf7_A Iron-containing alcohol dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: NAD EPE; 2.12A {Shewanella denitrificans}
Probab=47.71 E-value=68 Score=31.66 Aligned_cols=115 Identities=13% Similarity=0.080 Sum_probs=57.3
Q ss_pred ccccccccCceeecCCcc-c---ccCCC---CCCcEEEEEcCccCCCChHHHHHHHHHhhccCce--EEeeccCchhHHH
Q 014315 56 ILNNYYIPNYILVSGSEV-Q---RSSLI---PSCPVLVFINSKSGGQLGGKLLLTYRSLLNENQV--IDLGEKAPDKVLH 126 (427)
Q Consensus 56 ~~~~~~ip~~~~~~~~~~-~---~~~~~---~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~qv--~dl~~~~p~~~l~ 126 (427)
..+.|..|+.++...... . ..... ..++++||..+.-- ...+.+.++. ...++ |+-....|. .+
T Consensus 21 ~~~~f~~p~~i~~G~g~l~~l~~~l~~~g~~~~~~~liVtd~~~~---~~~l~~~L~~--~g~~~~~f~~v~~~pt--~~ 93 (375)
T 3rf7_A 21 SFKNFKCVPKMIFGRGSFVQLDTVLEQERTDANDFVVFLVDDVHQ---HKPLAARVPN--KAHDLVIYVNVDDEPT--TV 93 (375)
T ss_dssp TSCCCCCCSCEEESTTGGGGHHHHHHTTCCSTTCCEEEEEEGGGT---TSHHHHHSCC--CTTSEEEEECCSSCCB--HH
T ss_pred chhhhcCCCeEEEcCCHHHHHHHHHHHhcccCCCeEEEEECchhh---hhHHHHHHHh--cCCeEEEEeCCCCCCC--HH
Confidence 357899999887765331 1 11111 13678888875432 1224333321 12233 332222222 22
Q ss_pred HHHHHHHHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCC---------------CCCCCCEEEEeC
Q 014315 127 QLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLK---------------LPHSPPVATVPL 184 (427)
Q Consensus 127 ~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGDGTv~~Vln~l~~~~---------------~~~~~plgiIPl 184 (427)
.+.+.++.+++.+ ..+.+.||++|| |++..+...+.-.- ....+|+..||.
T Consensus 94 ~v~~~~~~~~~~~------~~~~D~IIavGG-GS~iD~AK~iA~~~~~~~~~~~~~~~~~~~~~~~P~i~IPT 159 (375)
T 3rf7_A 94 QVDELTAQVKAFN------TKLPVSVVGLGG-GSTMDLAKAVSLMLTNPGSSSEYQGWDLIKNPAVHHIGIPT 159 (375)
T ss_dssp HHHHHHHHHHHHC------SSCCSEEEEEES-HHHHHHHHHHHHHTSSCSCGGGGCEESCCCSCCCCEEEEES
T ss_pred HHHHHHHHHHHhC------CCCCCEEEEeCC-cHHHHHHHHHHHHHhCCCCHHHhhccccccCCCCCEEEEcC
Confidence 2222222111110 112678999999 88888877664310 013578999995
No 33
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=46.34 E-value=9.5 Score=33.70 Aligned_cols=61 Identities=18% Similarity=0.138 Sum_probs=33.7
Q ss_pred EEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCCCCCchHHHHHHHHHHHc
Q 014315 153 IVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKNPNTDQQAVLSFLEQVKN 217 (427)
Q Consensus 153 Iv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~~~~~~~~~~~~l~~i~~ 217 (427)
..+|||-|- +++.-+...-+..+|-+.+|=+|| ||+++..+-.. +.....++.++++.+..
T Consensus 56 ~Gi~G~tt~-~~l~r~~~~v~~~~Pd~vvi~~G~-ND~~~~~~~~~--~~~~~~~l~~ii~~~~~ 116 (209)
T 4hf7_A 56 RGISGQTSY-QFLLRFREDVINLSPALVVINAGT-NDVAENTGAYN--EDYTFGNIASMAELAKA 116 (209)
T ss_dssp EECTTCCHH-HHHHHHHHHTGGGCCSEEEECCCH-HHHTTSSSSCC--HHHHHHHHHHHHHHHHH
T ss_pred eccCcccHH-HHHHHHHHHHHhcCCCEEEEEeCC-CcCcccccccc--HHHHHHHHHHhhHHHhc
Confidence 357898664 455444331122467899999998 99987554221 00112345555655543
No 34
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=44.38 E-value=36 Score=33.02 Aligned_cols=38 Identities=32% Similarity=0.420 Sum_probs=29.7
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCcchh
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGNNIP 191 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGNDfA 191 (427)
-+.++++|||||+.-+ ..+.+. .+++--||-==-||+.
T Consensus 94 Id~L~~IGGdgS~~~a-~~l~~~----~i~vigiPkTIDNDl~ 131 (319)
T 4a3s_A 94 IEGLVVIGGDGSYMGA-KKLTEH----GFPCVGVPGTIDNDIP 131 (319)
T ss_dssp CCEEEEEECTTHHHHH-HHHHHT----TCCEEEEEEETTCCCT
T ss_pred CCEEEEeCCcHHHHHH-HHHhcc----CCcEEEeeccccCCCC
Confidence 4679999999998765 445553 5778889988899997
No 35
>1xah_A Sadhqs, 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, open form, form B, domain movement, cyclase; HET: NAD; 2.20A {Staphylococcus aureus} PDB: 1xag_A* 1xai_A* 1xaj_A* 1xal_A*
Probab=43.88 E-value=21 Score=34.84 Aligned_cols=90 Identities=18% Similarity=0.245 Sum_probs=46.2
Q ss_pred CcEEEEEcCccCCCChHHHHHHHHHhhccCc-e--EEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCc
Q 014315 82 CPVLVFINSKSGGQLGGKLLLTYRSLLNENQ-V--IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGD 158 (427)
Q Consensus 82 ~~v~vivNp~SG~~~g~~~~~~~~~~L~~~q-v--~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGD 158 (427)
++++|+.++... ..+.+.+.+.| ... + +.+....+.+.++.+.+.++.+.+.+ ..+.+.||++||
T Consensus 32 ~~~liVtd~~~~----~~~~~~v~~~L-~~g~~~~~~~~~~e~~p~~~~v~~~~~~~~~~~------~~r~d~iIavGG- 99 (354)
T 1xah_A 32 DQSFLLIDEYVN----QYFANKFDDIL-SYENVHKVIIPAGEKTKTFEQYQETLEYILSHH------VTRNTAIIAVGG- 99 (354)
T ss_dssp SCEEEEEEHHHH----HHHHHHHC-------CEEEEEECSGGGGCSHHHHHHHHHHHHTTC------CCTTCEEEEEES-
T ss_pred CeEEEEECCcHH----HHHHHHHHHHH-hcCCeEEEEECCCCCCCCHHHHHHHHHHHHHcC------CCCCceEEEECC-
Confidence 678888876432 22556666666 322 2 23332223222332333332222111 123378888988
Q ss_pred hHHHHHHHHHhcCCCCCCCCEEEEeC
Q 014315 159 GTASWLLGVVSDLKLPHSPPVATVPL 184 (427)
Q Consensus 159 GTv~~Vln~l~~~~~~~~~plgiIPl 184 (427)
|++..+...+...- ...+|+..||.
T Consensus 100 Gsv~D~ak~vA~~~-~rgip~i~IPT 124 (354)
T 1xah_A 100 GATGDFAGFVAATL-LRGVHFIQVPT 124 (354)
T ss_dssp HHHHHHHHHHHHHB-TTCCEEEEEEC
T ss_pred hHHHHHHHHHHHHh-ccCCCEEEECC
Confidence 88888888775321 24689999998
No 36
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A*
Probab=39.59 E-value=38 Score=34.97 Aligned_cols=41 Identities=27% Similarity=0.238 Sum_probs=29.7
Q ss_pred CcEEEEEcCchHHHHHH---HHHhcCCCCCCCCEEEEeCCCCcchh
Q 014315 149 RLRLIVAGGDGTASWLL---GVVSDLKLPHSPPVATVPLGTGNNIP 191 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vl---n~l~~~~~~~~~plgiIPlGTGNDfA 191 (427)
-+.++++|||||+.-+. +.+.+. ...+++--||-==-||+.
T Consensus 190 Id~LvvIGGdgS~~~A~~L~e~~~~~--g~~i~vVGIPkTIDNDl~ 233 (487)
T 2hig_A 190 VNILFTVGGDGTQRGALVISQEAKRR--GVDISVFGVPKTIDNDLS 233 (487)
T ss_dssp CSEEEEEECHHHHHHHHHHHHHHHHH--TCCCEEEEEECCTTSSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHHHh--CCCceEEeccccccCCCC
Confidence 46899999999987443 223232 235789999998899996
No 37
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=38.49 E-value=1.2e+02 Score=26.57 Aligned_cols=33 Identities=18% Similarity=0.363 Sum_probs=24.3
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCC
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTG 187 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTG 187 (427)
...|.++|+.+-+--|+.++.. .|.||+ |.-++
T Consensus 60 ~ViIa~AG~aa~LpgvvA~~t~-----~PVIgV-P~~~~ 92 (163)
T 3ors_A 60 NIIIAGAGGAAHLPGMVASLTT-----LPVIGV-PIETK 92 (163)
T ss_dssp CEEEEEEESSCCHHHHHHHHCS-----SCEEEE-EECCT
T ss_pred cEEEEECCchhhhHHHHHhccC-----CCEEEe-eCCCC
Confidence 3568899999999999999863 355554 55454
No 38
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=36.08 E-value=1.3e+02 Score=26.36 Aligned_cols=33 Identities=18% Similarity=0.366 Sum_probs=23.9
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCC
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTG 187 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTG 187 (427)
...|.++|+.+-+--|+.++.. .|.|| +|.-++
T Consensus 62 ~ViIa~AG~aa~LpgvvA~~t~-----~PVIg-VP~~~~ 94 (166)
T 3oow_A 62 KVIIAGAGGAAHLPGMVAAKTT-----LPVLG-VPVKSS 94 (166)
T ss_dssp CEEEEEECSSCCHHHHHHHTCS-----SCEEE-EECCCT
T ss_pred cEEEEECCcchhhHHHHHhccC-----CCEEE-eecCcC
Confidence 3567899999999999998763 34455 566554
No 39
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=35.93 E-value=1.4e+02 Score=26.39 Aligned_cols=34 Identities=18% Similarity=0.354 Sum_probs=24.9
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCCc
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTGN 188 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTGN 188 (427)
...|.++|+.+-+--|+.++.. .|.||+ |.-+++
T Consensus 64 ~ViIa~AG~aa~LpgvvA~~t~-----~PVIgV-P~~~~~ 97 (174)
T 3lp6_A 64 EVIIAGAGGAAHLPGMVAAATP-----LPVIGV-PVPLGR 97 (174)
T ss_dssp CEEEEEEESSCCHHHHHHHHCS-----SCEEEE-EECCSS
T ss_pred CEEEEecCchhhhHHHHHhccC-----CCEEEe-eCCCCC
Confidence 3678899999999999999863 355554 555553
No 40
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=34.96 E-value=75 Score=29.97 Aligned_cols=35 Identities=11% Similarity=0.112 Sum_probs=24.5
Q ss_pred hhhhhhccCcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeC
Q 014315 141 VFASEIEKRLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (427)
Q Consensus 141 ~~a~~~~~~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPl 184 (427)
+++.-....+.+|..|| +|+.|++-. ..|.-+||+
T Consensus 218 ~m~~~m~~aDlvI~~gG-~T~~E~~~~--------g~P~i~ip~ 252 (282)
T 3hbm_A 218 NIAKLMNESNKLIISAS-SLVNEALLL--------KANFKAICY 252 (282)
T ss_dssp CHHHHHHTEEEEEEESS-HHHHHHHHT--------TCCEEEECC
T ss_pred HHHHHHHHCCEEEECCc-HHHHHHHHc--------CCCEEEEeC
Confidence 34444445678888999 999998542 467777885
No 41
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=33.15 E-value=1.6e+02 Score=26.32 Aligned_cols=33 Identities=21% Similarity=0.407 Sum_probs=24.1
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCC
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTG 187 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTG 187 (427)
...|.++||.+-+--|+.++.. .|.|| +|.-++
T Consensus 70 ~ViIa~AG~aa~LpgvvA~~t~-----~PVIg-VP~~~~ 102 (183)
T 1o4v_A 70 EVIIAGAGGAAHLPGMVASITH-----LPVIG-VPVKTS 102 (183)
T ss_dssp CEEEEEEESSCCHHHHHHHHCS-----SCEEE-EEECCT
T ss_pred cEEEEecCcccccHHHHHhccC-----CCEEE-eeCCCC
Confidence 3568899999999999999863 34455 555454
No 42
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=33.13 E-value=1.6e+02 Score=26.03 Aligned_cols=33 Identities=15% Similarity=0.353 Sum_probs=23.5
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCC
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTG 187 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTG 187 (427)
...|.++||.+-+--|+.++.. .|.||+ |.-++
T Consensus 68 ~ViIa~AG~aa~LpgvvA~~t~-----~PVIgV-P~~~~ 100 (170)
T 1xmp_A 68 KVIIAGAGGAAHLPGMVAAKTN-----LPVIGV-PVQSK 100 (170)
T ss_dssp CEEEEEEESSCCHHHHHHTTCC-----SCEEEE-EECCT
T ss_pred cEEEEECCchhhhHHHHHhccC-----CCEEEe-eCCCC
Confidence 3567899999999999888753 355554 55444
No 43
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=32.83 E-value=23 Score=31.38 Aligned_cols=66 Identities=15% Similarity=0.082 Sum_probs=39.5
Q ss_pred cEEEEEcCchHHH---HHHHHHhcCCCCCCCCEEEEeCCCCcchhhhcCCCCCC---CCCchHHHHHHHHHHHcC
Q 014315 150 LRLIVAGGDGTAS---WLLGVVSDLKLPHSPPVATVPLGTGNNIPFSFGWGKKN---PNTDQQAVLSFLEQVKNA 218 (427)
Q Consensus 150 ~~IIv~GGDGTv~---~Vln~l~~~~~~~~~plgiIPlGTGNDfAR~LGw~~~~---~~~~~~~~~~~l~~i~~a 218 (427)
..-..++|+.|.. +++..+..+ ...|-+.+|=+|| ||+.+........ ......++.++++.+...
T Consensus 55 v~N~g~~G~t~~~~~~~~~~~~~~~--~~~pd~Vii~~G~-ND~~~~~~~~~~~~~~~~~f~~~l~~li~~l~~~ 126 (232)
T 3dc7_A 55 SDNLGISGSTIGSRYDAMAVRYQAI--PEDADFIAVFGGV-NDYGRDQPLGQYGDCDMTTFYGALMMLLTGLQTN 126 (232)
T ss_dssp CEEEECTTCCSSTTSSCHHHHGGGS--CTTCSEEEEECCH-HHHHTTCCCCCTTCCSTTSHHHHHHHHHHHHHHH
T ss_pred eEEeeeCCcccccChHHHHHHHHhc--CCCCCEEEEEEec-cccccCcCCccccccchHHHHHHHHHHHHHHHHh
Confidence 3445677887775 556656543 3467799999997 9998743222100 011112677778777654
No 44
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=31.94 E-value=87 Score=30.60 Aligned_cols=120 Identities=12% Similarity=0.102 Sum_probs=58.8
Q ss_pred cccccCceeecCCc-ccc---cCCCCCCcEEEEEcCccCCCChHHHHHHHHHhhccC--ceEEeeccCchhHHHHHHHHH
Q 014315 59 NYYIPNYILVSGSE-VQR---SSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QVIDLGEKAPDKVLHQLYVTL 132 (427)
Q Consensus 59 ~~~ip~~~~~~~~~-~~~---~~~~~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~--qv~dl~~~~p~~~l~~~~~~l 132 (427)
.|..|..++..... ..+ ......++++|+..+..-. ..+.+.+.+.|... ++..+....+..-++.+.+.+
T Consensus 5 ~f~~p~~i~~G~g~~~~l~~~l~~~g~~~~livtd~~~~~---~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~ 81 (386)
T 1rrm_A 5 RMILNETAWFGRGAVGALTDEVKRRGYQKALIVTDKTLVQ---CGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGL 81 (386)
T ss_dssp EEECCSEEEESTTGGGGHHHHHHHHTCCEEEEECBHHHHH---TTHHHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHH
T ss_pred cccCCceEEECcCHHHHHHHHHHHcCCCEEEEEECcchhh---chHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHH
Confidence 46677776654422 111 1111236788887654321 12456666666432 232222222222222222322
Q ss_pred HHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCC---C--------------CCCCCEEEEeC--CCCcchh
Q 014315 133 EKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLK---L--------------PHSPPVATVPL--GTGNNIP 191 (427)
Q Consensus 133 ~~l~~~gd~~a~~~~~~~~IIv~GGDGTv~~Vln~l~~~~---~--------------~~~~plgiIPl--GTGNDfA 191 (427)
+.+.+ .+.+.||++|| |++..+...+.-.- . ...+|+..||. |||-...
T Consensus 82 ~~~~~---------~~~d~IIavGG-Gsv~D~aK~iA~~~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~gtgSevt 149 (386)
T 1rrm_A 82 GVFQN---------SGADYLIAIGG-GSPQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTAGTAAEVT 149 (386)
T ss_dssp HHHHH---------HTCSEEEEEES-HHHHHHHHHHHHHHHCGGGTTSGGGSEECCCCSCCSCEEEEECSSSCCTTTC
T ss_pred HHHHh---------cCcCEEEEeCC-hHHHHHHHHHHHHHhCCCCCCHHHHhcccccCCCCCCEEEEeCCCCchhhhC
Confidence 22111 23578999998 78887776553210 0 23689999997 5554433
No 45
>3gw6_A Endo-N-acetylneuraminidase; chaperone, glycosidase, hydrolase; HET: TAM; 2.60A {Enterobacteria phage K1F}
Probab=31.50 E-value=14 Score=35.08 Aligned_cols=15 Identities=47% Similarity=0.762 Sum_probs=12.3
Q ss_pred CcEEEEEcCchHHHH
Q 014315 149 RLRLIVAGGDGTASW 163 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~ 163 (427)
..|+|||||+||-+.
T Consensus 46 ~q~~i~~g~~~t~~~ 60 (275)
T 3gw6_A 46 GQRIIFCGGEGTSST 60 (275)
T ss_dssp GCEEEEESSSSSSTT
T ss_pred ccEEEEecCCCCCCC
Confidence 458999999999653
No 46
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A*
Probab=31.27 E-value=45 Score=34.96 Aligned_cols=41 Identities=17% Similarity=0.161 Sum_probs=29.2
Q ss_pred CcEEEEEcCchHHHHHHH---HHhcCCCCCCCCEEEEeCCCCcchh
Q 014315 149 RLRLIVAGGDGTASWLLG---VVSDLKLPHSPPVATVPLGTGNNIP 191 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln---~l~~~~~~~~~plgiIPlGTGNDfA 191 (427)
-+.+|++|||||+.-+.. .+.+. ...+++--||-==-||++
T Consensus 167 Id~LvvIGGdgS~~~A~~L~e~~~~~--~~~i~vIGiPkTIDNDl~ 210 (555)
T 2f48_A 167 LNAIIIIGGDDSNTNAAILAEYFKKN--GENIQVIGVPKTIDADLR 210 (555)
T ss_dssp CSEEEEEESHHHHHHHHHHHHHHHHT--TCCCEEEEEEEETTCCCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHHHh--CCCCcEEEeccccCCCCC
Confidence 457999999999765433 22222 236888889987799996
No 47
>2x9a_A Attachment protein G3P; transmembrane, phage infection, phage recognition, HOST-VIRU interaction, virion; 2.47A {Enterobacteria phage IF1} PDB: 2x9b_A
Probab=30.70 E-value=12 Score=27.61 Aligned_cols=11 Identities=9% Similarity=0.090 Sum_probs=10.0
Q ss_pred EEEEEcCchHH
Q 014315 151 RLIVAGGDGTA 161 (427)
Q Consensus 151 ~IIv~GGDGTv 161 (427)
-|+|++||||+
T Consensus 40 GViVg~~dgtv 50 (65)
T 2x9a_A 40 GIGIGYDNDTS 50 (65)
T ss_dssp EEEEEETTTTE
T ss_pred eEEEECCCCCE
Confidence 49999999997
No 48
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=29.34 E-value=1.9e+02 Score=25.67 Aligned_cols=33 Identities=15% Similarity=0.251 Sum_probs=24.1
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCCCC
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLGTG 187 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlGTG 187 (427)
...|.++||.+-+--|+.++.. .|.||+ |.-++
T Consensus 78 ~ViIa~AG~aa~LpgvvA~~t~-----~PVIgV-P~~~~ 110 (182)
T 1u11_A 78 NVIIAGAGGAAHLPGMCAAWTR-----LPVLGV-PVESR 110 (182)
T ss_dssp CEEEEEEESSCCHHHHHHHHCS-----SCEEEE-EECCT
T ss_pred cEEEEecCchhhhHHHHHhccC-----CCEEEe-eCCCC
Confidence 3567899999999999999863 355554 55444
No 49
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=28.07 E-value=2.1e+02 Score=25.20 Aligned_cols=30 Identities=13% Similarity=0.214 Sum_probs=22.5
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeCC
Q 014315 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPLG 185 (427)
Q Consensus 150 ~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPlG 185 (427)
..|.++|+.+-+--|+.++.. .|.||+ |.-
T Consensus 64 ViIa~AG~aa~LpgvvA~~t~-----~PVIgV-P~~ 93 (169)
T 3trh_A 64 VFIAAAGLAAHLAGTIAAHTL-----KPVIGV-PMA 93 (169)
T ss_dssp EEEEEECSSCCHHHHHHHTCS-----SCEEEE-ECC
T ss_pred EEEEECChhhhhHHHHHhcCC-----CCEEEe-ecC
Confidence 567899999999999998763 355665 543
No 50
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=27.33 E-value=64 Score=35.18 Aligned_cols=42 Identities=21% Similarity=0.350 Sum_probs=29.7
Q ss_pred CcEEEEEcCchHHHHHHHHH---hcCCCCCCCCEEEEeCCCCcchh
Q 014315 149 RLRLIVAGGDGTASWLLGVV---SDLKLPHSPPVATVPLGTGNNIP 191 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l---~~~~~~~~~plgiIPlGTGNDfA 191 (427)
-+.+|++|||||+.-+..-. ...+ ...+|+--||-==-||++
T Consensus 490 Id~LvvIGGdgS~~~a~~L~~~~~~~~-~~~i~vvgiPkTIDNDl~ 534 (762)
T 3o8l_A 490 IQGLVIIGGFEAYTGGLELMEGRKQFD-ELCIPFVVIPATVSNNVP 534 (762)
T ss_dssp CCCEEEEESHHHHHHHHHHHHHHHHCS-TTCSCEEEEEBCTTCCCT
T ss_pred CCEEEEeCCchHHHHHHHHHHHHHhcc-ccCCCEEeeccccCCCCC
Confidence 45799999999987664322 1111 125788889998899997
No 51
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=26.89 E-value=2.6e+02 Score=27.47 Aligned_cols=121 Identities=17% Similarity=0.170 Sum_probs=58.9
Q ss_pred cccccCceeecCCc-cc---ccCCCCCCcEEEEEcCccCCCChHHHHHHHHHhhccC--ceEEeeccCchhHHHHHHHHH
Q 014315 59 NYYIPNYILVSGSE-VQ---RSSLIPSCPVLVFINSKSGGQLGGKLLLTYRSLLNEN--QVIDLGEKAPDKVLHQLYVTL 132 (427)
Q Consensus 59 ~~~ip~~~~~~~~~-~~---~~~~~~~~~v~vivNp~SG~~~g~~~~~~~~~~L~~~--qv~dl~~~~p~~~l~~~~~~l 132 (427)
.|..|+.++..... .. .......++++|+..+.+-... .+.+.+.+.|... .+.......|...++.+.+.+
T Consensus 17 ~~~~p~~i~~G~g~l~~l~~~l~~~g~~r~liVtd~~~~~~~--g~~~~v~~~L~~~g~~~~~f~~v~~~p~~~~v~~~~ 94 (407)
T 1vlj_A 17 VFHNPTKIVFGRGTIPKIGEEIKNAGIRKVLFLYGGGSIKKN--GVYDQVVDSLKKHGIEWVEVSGVKPNPVLSKVHEAV 94 (407)
T ss_dssp EECCCCEEEESTTCGGGHHHHHHHTTCCEEEEEECSSHHHHS--SHHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHH
T ss_pred eEecCCeEEECcCHHHHHHHHHHHcCCCeEEEEECchHHhhc--cHHHHHHHHHHHcCCeEEEecCccCCCCHHHHHHHH
Confidence 35567776654432 11 1111123678888864321111 1455566655432 232222212222222232322
Q ss_pred HHhhhccchhhhhhccCcEEEEEcCchHHHHHHHHHhcCC---------------CCCCCCEEEEeC--CCCcchh
Q 014315 133 EKFKAAGDVFASEIEKRLRLIVAGGDGTASWLLGVVSDLK---------------LPHSPPVATVPL--GTGNNIP 191 (427)
Q Consensus 133 ~~l~~~gd~~a~~~~~~~~IIv~GGDGTv~~Vln~l~~~~---------------~~~~~plgiIPl--GTGNDfA 191 (427)
+.+.+ .+.+.||++|| |++..+...+.-.- ....+|+..||. |||--..
T Consensus 95 ~~~~~---------~~~D~IIavGG-GsviD~AK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTagtgSevt 160 (407)
T 1vlj_A 95 EVAKK---------EKVEAVLGVGG-GSVVDSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTISATGTEMN 160 (407)
T ss_dssp HHHHH---------TTCSEEEEEES-HHHHHHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEECSCSSCGGGS
T ss_pred HHHHh---------cCCCEEEEeCC-hhHHHHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCCCcchhhc
Confidence 22111 23578999988 78888777664310 114689999997 4544443
No 52
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=25.52 E-value=1.3e+02 Score=33.66 Aligned_cols=42 Identities=24% Similarity=0.316 Sum_probs=29.8
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCC---CCCCEEEEeCCCCcchh
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLP---HSPPVATVPLGTGNNIP 191 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~---~~~plgiIPlGTGNDfA 191 (427)
-+.+|++|||||+.-+ ..|.+.... ..+|+--||-==-||++
T Consensus 689 Id~LvvIGGdgS~~~a-~~L~~~~~~y~~~~I~vVGIPkTIDNDl~ 733 (989)
T 3opy_A 689 FDGLIIIGGFEAFTAL-YELDAARAQYPIFNIPMCCLPATVSNNVP 733 (989)
T ss_dssp CSEEEEEESHHHHHHH-HHHHHHTTTCGGGCSCEEEEEBCSSCCCT
T ss_pred CCEEEEeCCchHHHHH-HHHHHHHhhCCCcCCcEEeccccccCCCC
Confidence 4689999999998654 345432111 25788889988899996
No 53
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=24.34 E-value=1.6e+02 Score=25.72 Aligned_cols=29 Identities=21% Similarity=0.292 Sum_probs=22.0
Q ss_pred cEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeC
Q 014315 150 LRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (427)
Q Consensus 150 ~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPl 184 (427)
..|.++|+.+-+--|+.++.. .|.||+ |.
T Consensus 61 ViIa~AG~aa~LpgvvA~~t~-----~PVIgV-P~ 89 (159)
T 3rg8_A 61 LYITIAGRSNALSGFVDGFVK-----GATIAC-PP 89 (159)
T ss_dssp EEEEECCSSCCHHHHHHHHSS-----SCEEEC-CC
T ss_pred EEEEECCchhhhHHHHHhccC-----CCEEEe-eC
Confidence 467789999999999999863 355554 53
No 54
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=23.83 E-value=2.1e+02 Score=24.85 Aligned_cols=30 Identities=17% Similarity=0.338 Sum_probs=22.7
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCCCCCCCCEEEEeC
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLKLPHSPPVATVPL 184 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~~~~~~plgiIPl 184 (427)
...|.++|+.+-+--|+.++.. .|.||+ |.
T Consensus 53 ~ViIa~AG~aa~Lpgvva~~t~-----~PVIgV-P~ 82 (157)
T 2ywx_A 53 DVFIAIAGLAAHLPGVVASLTT-----KPVIAV-PV 82 (157)
T ss_dssp SEEEEEEESSCCHHHHHHTTCS-----SCEEEE-EE
T ss_pred CEEEEEcCchhhhHHHHHhccC-----CCEEEe-cC
Confidence 5678899999999999988753 355554 55
No 55
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=23.06 E-value=2.7e+02 Score=24.76 Aligned_cols=85 Identities=15% Similarity=0.195 Sum_probs=43.6
Q ss_pred Cc-EEEEEcCccCCCChHHHHHHHHHhhccCce-EEeeccCchhHHHHHHHHHHHhhhccchhhhhhccCcEEEEEcCch
Q 014315 82 CP-VLVFINSKSGGQLGGKLLLTYRSLLNENQV-IDLGEKAPDKVLHQLYVTLEKFKAAGDVFASEIEKRLRLIVAGGDG 159 (427)
Q Consensus 82 ~~-v~vivNp~SG~~~g~~~~~~~~~~L~~~qv-~dl~~~~p~~~l~~~~~~l~~l~~~gd~~a~~~~~~~~IIv~GGDG 159 (427)
+| +.||.=..|- ..+.+.....|....| |++.-.......+++.+-.+.... ..-...|.++||.+
T Consensus 22 kp~V~IimGS~SD----~~v~~~a~~~L~~~gI~~e~~V~SAHRtp~~l~~~~~~a~~--------~g~~ViIa~AG~aa 89 (181)
T 4b4k_A 22 KSLVGVIMGSTSD----WETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARE--------RGLKVIIAGAGGAA 89 (181)
T ss_dssp CCSEEEEESSGGG----HHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTT--------TTCCEEEEEECSSC
T ss_pred CccEEEEECCHhH----HHHHHHHHHHHHHcCCCeeEEEEccccChHHHHHHHHHHHh--------cCceEEEEeccccc
Confidence 44 5566644443 3455666666665554 665432222222222222111111 11235677899999
Q ss_pred HHHHHHHHHhcCCCCCCCCEEEEeC
Q 014315 160 TASWLLGVVSDLKLPHSPPVATVPL 184 (427)
Q Consensus 160 Tv~~Vln~l~~~~~~~~~plgiIPl 184 (427)
-+--++.++.. .|.|| +|.
T Consensus 90 hLpGvvAa~T~-----~PVIG-VPv 108 (181)
T 4b4k_A 90 HLPGMVAAKTN-----LPVIG-VPV 108 (181)
T ss_dssp CHHHHHHTTCC-----SCEEE-EEC
T ss_pred cchhhHHhcCC-----CCEEE-Eec
Confidence 99999887642 34555 455
No 56
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=21.77 E-value=1.4e+02 Score=33.31 Aligned_cols=42 Identities=24% Similarity=0.299 Sum_probs=29.6
Q ss_pred CcEEEEEcCchHHHHHHHHHhcCC--C-CCCCCEEEEeCCCCcchh
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDLK--L-PHSPPVATVPLGTGNNIP 191 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~~--~-~~~~plgiIPlGTGNDfA 191 (427)
-+.+|++|||||+.-+.. |.+.. . ...+++--||-==-||++
T Consensus 663 Id~LvvIGGdgS~~~a~~-L~~~~~~~~~~~i~vVGIPkTIDNDl~ 707 (941)
T 3opy_B 663 FDGLILVGGFEAFISLHQ-LERARINYPSLRIPLVLIPATISNNVP 707 (941)
T ss_dssp CSEEEEEESHHHHHHHHH-HHHGGGTCGGGCSCEEEEEBCSSCCCT
T ss_pred CCEEEEeCCchHHHHHHH-HHHHHHhcCccCCcEEeeeccccCCCC
Confidence 468999999999865433 33211 1 125888889998899996
No 57
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=20.57 E-value=1.5e+02 Score=32.42 Aligned_cols=42 Identities=26% Similarity=0.300 Sum_probs=30.0
Q ss_pred CcEEEEEcCchHHHHHHHHHhcC-CCC--CCCCEEEEeCCCCcchh
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDL-KLP--HSPPVATVPLGTGNNIP 191 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~-~~~--~~~plgiIPlGTGNDfA 191 (427)
-+.+|++|||||..-+.. |.+. ... ..+|+--||-==-||++
T Consensus 484 Id~LvvIGGdgS~~~a~~-L~~~~~~~~~~~i~vIgiPkTIDNDl~ 528 (787)
T 3o8o_A 484 LDGLIILGGFEGFRSLKQ-LRDGRTQHPIFNIPMCLIPATVSNNVP 528 (787)
T ss_dssp CSEEEEEESHHHHHHHHH-HHHHTTTCGGGGSCEEEEEBCTTCCCT
T ss_pred CCEEEEeCCchHHHHHHH-HHHHHHhcCccCCceeecccccccCCC
Confidence 468999999999876543 3321 111 25888889998899997
No 58
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A
Probab=20.50 E-value=1.3e+02 Score=30.33 Aligned_cols=42 Identities=29% Similarity=0.322 Sum_probs=28.5
Q ss_pred CcEEEEEcCchHHHHHHHHHhcC--CCCCCCCEEEEeCCCCcchh
Q 014315 149 RLRLIVAGGDGTASWLLGVVSDL--KLPHSPPVATVPLGTGNNIP 191 (427)
Q Consensus 149 ~~~IIv~GGDGTv~~Vln~l~~~--~~~~~~plgiIPlGTGNDfA 191 (427)
-+.+|++|||||+.-+.. |.+. +....+++--||-==-||++
T Consensus 105 Id~Lv~IGGdgS~~~A~~-L~~~~~~~g~~i~vIGiPkTIDNDl~ 148 (419)
T 3hno_A 105 IGYFFYNGGGDSADTCLK-VSQLSGTLGYPIQAIHVPKTVDNDLP 148 (419)
T ss_dssp EEEEEEEESHHHHHHHHH-HHHHHHHTTCCCEEEEEECCTTCCCS
T ss_pred CCEEEEeCCchHHHHHHH-HHHHHHHhCCCccEEEecccccCCCc
Confidence 357999999999765433 3220 01235778889987789995
Done!