Query 014316
Match_columns 427
No_of_seqs 157 out of 1857
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 03:56:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014316.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014316hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2941 Beta-1,4-mannosyltrans 100.0 2.3E-59 5.1E-64 445.3 35.7 391 1-425 9-402 (444)
2 PLN02275 transferase, transfer 100.0 2.4E-48 5.3E-53 393.1 40.1 370 1-425 1-370 (371)
3 cd03816 GT1_ALG1_like This fam 100.0 1.1E-45 2.5E-50 379.0 39.8 375 3-426 2-379 (415)
4 cd03796 GT1_PIG-A_like This fa 100.0 2.7E-36 5.8E-41 307.6 35.1 311 15-425 13-330 (398)
5 PRK10307 putative glycosyl tra 100.0 5.8E-36 1.3E-40 306.2 36.9 340 6-426 2-371 (412)
6 TIGR03088 stp2 sugar transfera 100.0 1.7E-35 3.7E-40 298.1 34.7 325 4-425 2-335 (374)
7 PLN02871 UDP-sulfoquinovose:DA 100.0 6E-35 1.3E-39 303.8 33.5 326 4-426 58-398 (465)
8 TIGR03449 mycothiol_MshA UDP-N 100.0 1.2E-34 2.7E-39 295.1 35.0 328 16-425 20-365 (405)
9 cd03805 GT1_ALG2_like This fam 100.0 3.5E-34 7.5E-39 289.7 33.0 337 7-426 4-362 (392)
10 PRK15427 colanic acid biosynth 100.0 1.8E-33 3.9E-38 287.9 35.2 242 98-426 115-368 (406)
11 TIGR02472 sucr_P_syn_N sucrose 100.0 1.6E-33 3.4E-38 291.2 34.2 329 21-425 32-403 (439)
12 cd04962 GT1_like_5 This family 100.0 2.1E-33 4.5E-38 281.2 33.6 322 6-425 2-333 (371)
13 cd03812 GT1_CapH_like This fam 100.0 1.7E-32 3.6E-37 272.7 34.7 313 14-426 10-329 (358)
14 cd03818 GT1_ExpC_like This fam 100.0 2.5E-32 5.3E-37 278.1 35.3 327 20-426 12-364 (396)
15 PRK15179 Vi polysaccharide bio 100.0 2.1E-32 4.6E-37 293.4 35.2 247 99-424 398-655 (694)
16 cd05844 GT1_like_7 Glycosyltra 100.0 1E-32 2.2E-37 275.8 29.8 246 98-426 79-334 (367)
17 cd03819 GT1_WavL_like This fam 100.0 4.4E-32 9.5E-37 269.4 32.3 306 14-424 8-326 (355)
18 cd03800 GT1_Sucrose_synthase T 100.0 6.4E-32 1.4E-36 272.4 33.7 329 16-426 21-366 (398)
19 PRK00654 glgA glycogen synthas 100.0 5.4E-32 1.2E-36 281.8 33.8 269 100-425 117-425 (466)
20 TIGR02149 glgA_Coryne glycogen 100.0 6.4E-32 1.4E-36 272.8 31.9 306 24-425 25-349 (388)
21 PRK15484 lipopolysaccharide 1, 100.0 1.3E-31 2.8E-36 271.9 34.2 320 5-426 3-342 (380)
22 TIGR02468 sucrsPsyn_pln sucros 100.0 1.4E-31 3E-36 292.6 36.3 348 22-426 202-635 (1050)
23 PLN02846 digalactosyldiacylgly 100.0 3.6E-31 7.9E-36 271.7 35.2 329 1-425 1-360 (462)
24 cd04955 GT1_like_6 This family 100.0 3.8E-31 8.2E-36 263.2 34.1 303 22-426 22-328 (363)
25 cd03806 GT1_ALG11_like This fa 100.0 3.6E-31 7.7E-36 272.0 34.5 331 13-426 11-390 (419)
26 cd03794 GT1_wbuB_like This fam 100.0 9.5E-31 2.1E-35 258.8 36.3 333 16-426 15-363 (394)
27 cd03817 GT1_UGDG_like This fam 100.0 7.6E-31 1.7E-35 258.9 34.1 253 99-426 82-341 (374)
28 cd03795 GT1_like_4 This family 100.0 7.3E-31 1.6E-35 260.3 33.4 310 15-426 13-330 (357)
29 cd03808 GT1_cap1E_like This fa 100.0 1.1E-30 2.5E-35 255.4 34.1 315 7-425 2-326 (359)
30 TIGR02095 glgA glycogen/starch 100.0 6.6E-31 1.4E-35 274.0 33.5 269 100-425 127-434 (473)
31 cd03799 GT1_amsK_like This is 100.0 8.9E-31 1.9E-35 259.4 30.3 236 99-426 77-325 (355)
32 PLN02316 synthase/transferase 100.0 3.5E-30 7.5E-35 282.4 35.4 255 100-425 708-995 (1036)
33 cd04951 GT1_WbdM_like This fam 100.0 6.8E-30 1.5E-34 253.6 33.5 238 100-425 78-323 (360)
34 PRK14099 glycogen synthase; Pr 100.0 8.2E-30 1.8E-34 266.1 35.4 267 100-424 132-440 (485)
35 PRK09922 UDP-D-galactose:(gluc 100.0 3E-30 6.5E-35 259.6 31.1 227 99-426 82-322 (359)
36 cd03801 GT1_YqgM_like This fam 100.0 1.1E-29 2.3E-34 248.2 33.5 249 99-425 83-338 (374)
37 TIGR02470 sucr_synth sucrose s 100.0 1.7E-29 3.7E-34 271.3 37.0 337 28-425 300-706 (784)
38 cd03791 GT1_Glycogen_synthase_ 100.0 1.3E-29 2.9E-34 263.9 35.1 268 100-425 128-439 (476)
39 cd03811 GT1_WabH_like This fam 100.0 1.3E-29 2.8E-34 247.0 32.7 309 7-420 2-321 (353)
40 cd03807 GT1_WbnK_like This fam 100.0 1.4E-29 3E-34 248.7 33.1 318 7-426 3-330 (365)
41 cd03814 GT1_like_2 This family 100.0 1.3E-29 2.9E-34 250.2 32.3 310 19-426 18-330 (364)
42 PRK15490 Vi polysaccharide bio 100.0 8.8E-30 1.9E-34 263.1 31.8 246 98-422 277-532 (578)
43 cd03802 GT1_AviGT4_like This f 100.0 6.2E-30 1.4E-34 251.9 28.2 218 98-425 84-305 (335)
44 PRK14098 glycogen synthase; Pr 100.0 3.4E-29 7.3E-34 261.8 35.0 268 100-424 140-447 (489)
45 cd03798 GT1_wlbH_like This fam 100.0 2.1E-29 4.5E-34 247.3 31.3 246 99-426 91-342 (377)
46 PLN02939 transferase, transfer 100.0 8.1E-29 1.7E-33 267.5 37.6 270 100-425 609-928 (977)
47 cd03813 GT1_like_3 This family 100.0 7.3E-30 1.6E-34 266.4 28.0 244 99-426 171-440 (475)
48 PLN02949 transferase, transfer 100.0 3.2E-29 7E-34 259.7 31.9 197 156-426 210-420 (463)
49 cd03820 GT1_amsD_like This fam 100.0 8E-29 1.7E-33 241.3 32.6 297 16-425 13-316 (348)
50 cd03822 GT1_ecORF704_like This 100.0 2.2E-28 4.8E-33 242.1 33.2 243 100-426 75-332 (366)
51 PLN02501 digalactosyldiacylgly 100.0 3E-28 6.6E-33 254.4 35.1 244 100-426 433-679 (794)
52 cd03821 GT1_Bme6_like This fam 100.0 1.9E-28 4.1E-33 241.5 32.0 251 99-426 85-343 (375)
53 PRK10125 putative glycosyl tra 100.0 1.8E-28 3.9E-33 250.8 32.2 319 4-422 1-365 (405)
54 cd03804 GT1_wbaZ_like This fam 100.0 5.4E-29 1.2E-33 248.7 27.6 230 99-426 81-324 (351)
55 cd03792 GT1_Trehalose_phosphor 100.0 1.2E-28 2.5E-33 248.9 29.2 241 99-425 83-334 (372)
56 cd03823 GT1_ExpE7_like This fa 100.0 3.9E-28 8.5E-33 238.9 32.1 305 16-426 15-327 (359)
57 PLN00142 sucrose synthase 100.0 3E-28 6.6E-33 261.8 32.2 336 26-424 322-728 (815)
58 cd03809 GT1_mtfB_like This fam 100.0 5.7E-28 1.2E-32 239.0 29.6 242 100-425 84-333 (365)
59 KOG1111 N-acetylglucosaminyltr 100.0 1.9E-29 4.2E-34 242.4 18.1 308 18-425 14-332 (426)
60 cd04946 GT1_AmsK_like This fam 100.0 2.7E-27 5.8E-32 242.4 33.2 237 100-426 126-375 (407)
61 TIGR03087 stp1 sugar transfera 100.0 2.5E-27 5.5E-32 241.5 26.7 239 99-426 102-360 (397)
62 TIGR02918 accessory Sec system 100.0 4.1E-27 8.9E-32 246.2 26.5 237 99-426 209-465 (500)
63 cd03825 GT1_wcfI_like This fam 100.0 2.2E-26 4.7E-31 228.9 28.1 248 100-426 50-328 (365)
64 cd04949 GT1_gtfA_like This fam 99.9 8.8E-26 1.9E-30 227.1 25.4 239 100-426 98-343 (372)
65 PHA01630 putative group 1 glyc 99.9 4.4E-25 9.4E-30 219.9 23.7 188 123-412 65-257 (331)
66 cd03785 GT1_MurG MurG is an N- 99.9 7.6E-24 1.7E-28 211.3 28.0 302 11-426 5-322 (350)
67 PRK00726 murG undecaprenyldiph 99.9 6.2E-24 1.3E-28 213.2 27.2 306 5-426 2-322 (357)
68 TIGR01133 murG undecaprenyldip 99.9 1E-23 2.2E-28 210.2 27.1 302 6-426 2-319 (348)
69 cd04950 GT1_like_1 Glycosyltra 99.9 2.2E-23 4.8E-28 211.0 28.2 325 5-425 5-337 (373)
70 PRK05749 3-deoxy-D-manno-octul 99.9 5.8E-23 1.3E-27 211.3 28.4 313 7-426 52-386 (425)
71 PHA01633 putative glycosyl tra 99.9 3.2E-22 6.9E-27 198.4 25.3 206 127-425 70-304 (335)
72 cd03793 GT1_Glycogen_synthase_ 99.9 4.9E-21 1.1E-25 198.5 26.3 291 100-425 147-549 (590)
73 PRK09814 beta-1,6-galactofuran 99.9 5.8E-21 1.3E-25 190.6 21.9 222 100-425 63-297 (333)
74 cd01635 Glycosyltransferase_GT 99.9 1.1E-19 2.3E-24 167.7 25.5 120 263-412 109-229 (229)
75 PF00534 Glycos_transf_1: Glyc 99.8 1.4E-20 3E-25 168.9 13.2 142 255-426 12-156 (172)
76 cd03788 GT1_TPS Trehalose-6-Ph 99.8 9.1E-20 2E-24 189.6 21.1 245 100-425 130-424 (460)
77 PRK13609 diacylglycerol glucos 99.8 4E-19 8.6E-24 180.1 24.3 225 99-426 102-336 (380)
78 TIGR02400 trehalose_OtsA alpha 99.8 2.4E-18 5.2E-23 178.2 24.5 245 100-425 126-419 (456)
79 cd03786 GT1_UDP-GlcNAc_2-Epime 99.8 1.7E-18 3.6E-23 173.8 21.2 236 100-425 87-334 (363)
80 PLN02605 monogalactosyldiacylg 99.8 5.2E-18 1.1E-22 172.4 23.1 233 98-426 97-345 (382)
81 COG0297 GlgA Glycogen synthase 99.8 4.2E-17 9.1E-22 168.3 28.3 267 100-424 129-438 (487)
82 TIGR00236 wecB UDP-N-acetylglu 99.8 2.3E-17 4.9E-22 166.4 21.9 239 99-425 84-331 (365)
83 PRK00025 lpxB lipid-A-disaccha 99.8 2.3E-17 5.1E-22 166.8 21.9 311 6-425 3-338 (380)
84 PRK13608 diacylglycerol glucos 99.7 3.1E-16 6.7E-21 159.9 23.3 223 99-425 102-335 (391)
85 PF13692 Glyco_trans_1_4: Glyc 99.7 3.5E-17 7.6E-22 141.0 10.5 129 259-426 3-133 (135)
86 KOG1387 Glycosyltransferase [C 99.7 5.9E-15 1.3E-19 142.0 26.1 251 100-426 149-422 (465)
87 PLN03063 alpha,alpha-trehalose 99.7 1.1E-15 2.3E-20 167.9 23.7 246 100-425 146-440 (797)
88 COG0438 RfaG Glycosyltransfera 99.7 3.5E-15 7.5E-20 143.6 24.6 247 102-425 84-339 (381)
89 KOG0853 Glycosyltransferase [C 99.7 3.4E-15 7.4E-20 152.4 21.7 262 100-426 144-431 (495)
90 PRK14501 putative bifunctional 99.6 8.5E-15 1.8E-19 160.4 19.5 243 100-425 132-425 (726)
91 TIGR00215 lpxB lipid-A-disacch 99.6 8.5E-14 1.8E-18 141.8 20.7 279 10-394 10-292 (385)
92 TIGR03713 acc_sec_asp1 accesso 99.5 2.4E-13 5.2E-18 142.9 16.9 132 258-425 319-485 (519)
93 PF13579 Glyco_trans_4_4: Glyc 99.5 8.3E-14 1.8E-18 121.6 11.1 152 20-195 6-160 (160)
94 TIGR02398 gluc_glyc_Psyn gluco 99.4 2.6E-11 5.6E-16 126.0 23.3 133 259-425 286-445 (487)
95 PF13439 Glyco_transf_4: Glyco 99.4 3.3E-12 7.1E-17 113.4 13.0 94 100-200 79-176 (177)
96 PRK12446 undecaprenyldiphospho 99.3 9.1E-10 2E-14 110.9 26.1 294 19-425 12-322 (352)
97 COG0707 MurG UDP-N-acetylgluco 99.3 1.4E-09 3.1E-14 109.2 27.2 285 21-425 17-321 (357)
98 PF09314 DUF1972: Domain of un 99.2 6.7E-10 1.4E-14 101.0 18.0 175 4-195 1-183 (185)
99 TIGR02094 more_P_ylases alpha- 99.2 2.3E-09 5E-14 114.5 24.0 142 254-424 386-552 (601)
100 PLN03064 alpha,alpha-trehalose 99.2 2.1E-09 4.6E-14 118.7 24.0 134 259-425 364-524 (934)
101 TIGR03492 conserved hypothetic 99.2 9.3E-09 2E-13 105.2 26.5 233 101-425 93-361 (396)
102 TIGR03568 NeuC_NnaA UDP-N-acet 99.2 2.3E-08 5E-13 101.3 26.9 236 100-424 92-335 (365)
103 PF13477 Glyco_trans_4_2: Glyc 99.2 1.3E-09 2.8E-14 94.3 15.2 128 19-174 11-139 (139)
104 PF05693 Glycogen_syn: Glycoge 99.2 4.8E-09 1E-13 109.4 21.5 226 157-412 212-522 (633)
105 TIGR02919 accessory Sec system 99.1 4.3E-09 9.4E-14 108.5 21.2 113 274-425 291-408 (438)
106 PF13528 Glyco_trans_1_3: Glyc 99.1 3.2E-08 6.9E-13 97.6 23.6 117 256-425 191-317 (318)
107 TIGR03590 PseG pseudaminic aci 98.9 6.4E-07 1.4E-11 87.4 23.0 98 258-397 171-269 (279)
108 cd03784 GT1_Gtf_like This fami 98.8 4.3E-07 9.4E-12 92.6 19.2 74 341-425 288-369 (401)
109 cd04299 GT1_Glycogen_Phosphory 98.7 1.8E-06 3.8E-11 94.5 22.0 132 254-414 475-617 (778)
110 COG1519 KdtA 3-deoxy-D-manno-o 98.6 6.9E-05 1.5E-09 75.6 29.1 309 7-424 51-382 (419)
111 PF02684 LpxB: Lipid-A-disacch 98.6 3.2E-06 6.8E-11 85.5 19.7 279 9-395 2-286 (373)
112 TIGR00661 MJ1255 conserved hyp 98.6 1.3E-05 2.9E-10 79.6 22.2 74 341-424 229-310 (321)
113 COG0763 LpxB Lipid A disacchar 98.6 4.2E-06 9E-11 83.4 18.1 279 10-395 6-290 (381)
114 TIGR01426 MGT glycosyltransfer 98.5 1.7E-05 3.7E-10 80.8 22.5 92 318-425 257-356 (392)
115 PF02350 Epimerase_2: UDP-N-ac 98.4 1.3E-05 2.8E-10 80.7 17.2 240 99-425 65-315 (346)
116 PF04007 DUF354: Protein of un 98.4 4.1E-05 8.9E-10 76.4 20.0 276 23-425 18-307 (335)
117 PF13524 Glyco_trans_1_2: Glyc 98.3 7.8E-07 1.7E-11 71.5 5.3 54 372-425 6-59 (92)
118 PRK01021 lpxB lipid-A-disaccha 98.3 8.2E-05 1.8E-09 78.8 21.1 275 10-394 231-513 (608)
119 COG4671 Predicted glycosyl tra 98.0 0.0021 4.5E-08 63.5 22.7 75 341-425 277-362 (400)
120 COG0381 WecB UDP-N-acetylgluco 98.0 0.0016 3.5E-08 65.3 22.0 240 100-425 91-338 (383)
121 PF00982 Glyco_transf_20: Glyc 97.9 0.00088 1.9E-08 70.1 19.8 262 99-424 139-436 (474)
122 PRK10117 trehalose-6-phosphate 97.9 0.0011 2.3E-08 69.0 19.5 137 259-424 256-415 (474)
123 PRK02797 4-alpha-L-fucosyltran 97.9 0.0016 3.5E-08 63.5 19.0 229 100-412 38-274 (322)
124 PLN02205 alpha,alpha-trehalose 97.8 0.0025 5.5E-08 71.2 21.6 133 259-424 340-513 (854)
125 PF07429 Glyco_transf_56: 4-al 97.8 0.0024 5.2E-08 63.2 18.7 242 100-425 77-330 (360)
126 PF08323 Glyco_transf_5: Starc 97.8 3.6E-05 7.7E-10 73.7 5.9 81 100-184 132-233 (245)
127 PF04464 Glyphos_transf: CDP-G 97.8 0.00045 9.7E-09 69.9 14.1 234 100-424 77-332 (369)
128 TIGR02195 heptsyl_trn_II lipop 97.8 0.005 1.1E-07 61.4 21.3 103 254-394 171-276 (334)
129 PHA03392 egt ecdysteroid UDP-g 97.8 0.0074 1.6E-07 63.9 23.3 74 341-425 346-429 (507)
130 PRK14089 ipid-A-disaccharide s 97.7 0.00086 1.9E-08 67.4 13.8 92 258-395 168-261 (347)
131 COG3914 Spy Predicted O-linked 97.6 0.0031 6.7E-08 65.8 16.4 110 250-394 423-537 (620)
132 PRK10422 lipopolysaccharide co 97.5 0.08 1.7E-06 53.2 25.2 100 258-395 184-288 (352)
133 PRK10916 ADP-heptose:LPS hepto 97.5 0.046 9.9E-07 54.9 23.2 70 316-394 213-286 (348)
134 COG0380 OtsA Trehalose-6-phosp 97.4 0.015 3.3E-07 60.5 19.5 138 258-424 282-441 (486)
135 COG0859 RfaF ADP-heptose:LPS h 97.3 0.024 5.3E-07 56.7 18.9 100 257-395 175-277 (334)
136 PF13844 Glyco_transf_41: Glyc 97.3 0.0023 5E-08 66.4 11.6 114 247-395 275-391 (468)
137 cd03789 GT1_LPS_heptosyltransf 97.2 0.034 7.4E-07 53.9 18.9 74 316-398 153-227 (279)
138 COG1819 Glycosyl transferases, 97.2 0.01 2.2E-07 61.1 15.7 92 316-425 265-365 (406)
139 COG4641 Uncharacterized protei 97.2 0.0047 1E-07 61.6 12.5 84 342-425 238-324 (373)
140 KOG3742 Glycogen synthase [Car 97.2 0.0066 1.4E-07 61.5 13.5 241 158-425 244-575 (692)
141 COG1817 Uncharacterized protei 97.2 0.14 3.1E-06 50.1 21.8 285 14-424 6-311 (346)
142 TIGR02201 heptsyl_trn_III lipo 97.1 0.26 5.7E-06 49.2 24.0 71 316-395 213-286 (344)
143 TIGR02193 heptsyl_trn_I lipopo 96.7 0.18 3.9E-06 49.7 19.0 130 256-425 178-318 (319)
144 PF06258 Mito_fiss_Elm1: Mitoc 96.7 0.41 8.9E-06 47.5 21.0 75 317-398 183-259 (311)
145 COG3660 Predicted nucleoside-d 96.5 0.84 1.8E-05 43.8 21.6 78 315-398 196-275 (329)
146 PF12000 Glyco_trans_4_3: Gkyc 96.5 0.064 1.4E-06 48.4 12.5 156 32-200 2-170 (171)
147 PF04101 Glyco_tran_28_C: Glyc 96.2 0.00026 5.5E-09 63.3 -4.7 75 341-425 55-141 (167)
148 PRK10964 ADP-heptose:LPS hepto 96.2 0.83 1.8E-05 45.2 20.0 70 316-396 210-280 (322)
149 PLN02448 UDP-glycosyltransfera 96.1 2.1 4.6E-05 44.8 30.9 76 342-426 324-413 (459)
150 PF00862 Sucrose_synth: Sucros 95.9 0.11 2.3E-06 54.1 12.5 77 100-179 400-481 (550)
151 PRK10017 colanic acid biosynth 95.9 2.6 5.6E-05 43.7 26.2 57 332-397 297-355 (426)
152 TIGR03609 S_layer_CsaB polysac 95.8 2 4.4E-05 41.9 26.5 60 326-396 217-277 (298)
153 PF11997 DUF3492: Domain of un 95.8 0.062 1.3E-06 52.2 9.7 80 98-180 169-259 (268)
154 PF10087 DUF2325: Uncharacteri 95.4 0.037 8E-07 45.0 5.8 83 319-402 2-89 (97)
155 PRK14986 glycogen phosphorylas 95.4 0.072 1.6E-06 58.7 9.5 144 253-420 539-702 (815)
156 PF08288 PIGA: PIGA (GPI ancho 95.3 0.062 1.3E-06 42.7 6.4 72 54-137 14-85 (90)
157 PLN02173 UDP-glucosyl transfer 95.3 4.5 9.7E-05 42.3 30.7 77 341-426 317-406 (449)
158 COG0058 GlgP Glucan phosphoryl 95.2 0.14 3E-06 55.9 10.7 133 258-414 487-630 (750)
159 PLN03007 UDP-glucosyltransfera 94.9 6 0.00013 41.7 34.3 47 341-396 345-391 (482)
160 cd04300 GT1_Glycogen_Phosphory 94.8 0.16 3.4E-06 56.2 9.9 142 254-419 527-688 (797)
161 TIGR02093 P_ylase glycogen/sta 94.6 0.11 2.5E-06 57.1 8.2 144 253-420 523-686 (794)
162 PLN02208 glycosyltransferase f 94.2 8.1 0.00018 40.3 32.1 76 342-426 312-399 (442)
163 PRK14985 maltodextrin phosphor 94.2 0.11 2.3E-06 57.2 7.0 143 253-419 525-687 (798)
164 PF00343 Phosphorylase: Carboh 93.9 0.73 1.6E-05 50.3 12.5 139 258-418 444-601 (713)
165 PF01075 Glyco_transf_9: Glyco 93.8 0.17 3.8E-06 47.8 6.9 103 255-395 103-209 (247)
166 PF05159 Capsule_synth: Capsul 92.9 1.5 3.3E-05 42.2 12.0 97 260-395 119-225 (269)
167 PLN02562 UDP-glycosyltransfera 92.4 16 0.00034 38.2 29.1 77 341-426 328-411 (448)
168 PF08660 Alg14: Oligosaccharid 91.9 2.2 4.8E-05 38.4 10.9 65 100-181 91-161 (170)
169 PF10093 DUF2331: Uncharacteri 90.0 24 0.00052 35.9 17.5 47 342-397 245-291 (374)
170 PF04230 PS_pyruv_trans: Polys 88.3 21 0.00046 33.1 19.1 48 341-396 237-284 (286)
171 PLN03004 UDP-glycosyltransfera 87.9 4.1 8.9E-05 42.6 10.5 77 341-426 334-422 (451)
172 PF12038 DUF3524: Domain of un 87.7 11 0.00023 33.9 11.4 79 100-183 58-136 (168)
173 COG2327 WcaK Polysaccharide py 87.1 38 0.00082 34.6 26.5 70 320-398 244-314 (385)
174 PF03033 Glyco_transf_28: Glyc 86.5 0.98 2.1E-05 38.4 4.2 50 9-62 3-52 (139)
175 COG3980 spsG Spore coat polysa 86.0 2.6 5.7E-05 40.9 7.1 61 320-393 190-251 (318)
176 PF04413 Glycos_transf_N: 3-De 85.9 5.2 0.00011 36.5 8.9 82 100-194 94-179 (186)
177 PF00201 UDPGT: UDP-glucoronos 85.5 5.8 0.00013 41.6 10.3 76 341-425 323-406 (500)
178 PF06925 MGDG_synth: Monogalac 83.2 7.3 0.00016 34.7 8.5 69 99-188 87-158 (169)
179 PLN02410 UDP-glucoronosyl/UDP- 82.9 65 0.0014 33.7 31.6 77 341-426 324-408 (451)
180 PLN02210 UDP-glucosyl transfer 82.6 19 0.00041 37.7 12.5 76 342-426 325-413 (456)
181 PLN02670 transferase, transfer 82.1 12 0.00026 39.4 10.8 75 343-426 341-427 (472)
182 PLN02167 UDP-glycosyltransfera 80.2 20 0.00044 37.7 11.7 76 342-426 341-432 (475)
183 PF03016 Exostosin: Exostosin 79.9 2.6 5.7E-05 40.8 4.7 69 352-423 227-300 (302)
184 PLN00164 glucosyltransferase; 79.3 24 0.00052 37.2 12.0 75 343-426 341-429 (480)
185 PLN02764 glycosyltransferase f 78.7 23 0.0005 37.1 11.4 75 343-426 319-405 (453)
186 PLN00414 glycosyltransferase f 77.9 31 0.00067 36.1 12.1 85 330-426 304-400 (446)
187 PLN02863 UDP-glucoronosyl/UDP- 76.6 21 0.00045 37.7 10.5 75 342-425 344-430 (477)
188 PLN02207 UDP-glycosyltransfera 73.7 19 0.00042 37.8 9.3 77 341-426 332-424 (468)
189 COG0569 TrkA K+ transport syst 73.5 40 0.00086 31.7 10.6 130 6-185 2-132 (225)
190 PLN02152 indole-3-acetate beta 73.3 22 0.00048 37.3 9.6 76 342-426 328-415 (455)
191 PF04392 ABC_sub_bind: ABC tra 73.3 93 0.002 30.1 14.5 81 329-415 150-234 (294)
192 PLN02554 UDP-glycosyltransfera 70.5 32 0.00069 36.3 10.2 77 341-426 342-438 (481)
193 PF00389 2-Hacid_dh: D-isomer 67.4 36 0.00078 28.7 8.2 77 328-412 8-86 (133)
194 PLN02534 UDP-glycosyltransfera 67.1 1.8E+02 0.0038 30.9 32.8 46 342-396 345-390 (491)
195 PLN02992 coniferyl-alcohol glu 66.2 39 0.00085 35.7 9.7 76 342-426 339-425 (481)
196 PLN00414 glycosyltransferase f 65.9 1.4E+02 0.0029 31.3 13.6 42 1-43 1-42 (446)
197 COG1703 ArgK Putative periplas 63.7 1.6E+02 0.0035 29.2 17.2 114 5-138 49-177 (323)
198 PLN02555 limonoid glucosyltran 62.5 75 0.0016 33.5 11.0 75 341-426 337-427 (480)
199 KOG1192 UDP-glucuronosyl and U 61.8 40 0.00087 35.1 8.9 63 342-412 336-403 (496)
200 PF02826 2-Hacid_dh_C: D-isome 59.9 37 0.00081 30.4 7.3 85 314-399 34-131 (178)
201 TIGR00715 precor6x_red precorr 59.1 51 0.0011 31.7 8.3 93 326-426 159-255 (256)
202 PRK05647 purN phosphoribosylgl 56.5 72 0.0016 29.4 8.6 55 5-62 2-58 (200)
203 PF01012 ETF: Electron transfe 56.3 1.1E+02 0.0024 26.8 9.6 100 21-138 20-125 (164)
204 PF01113 DapB_N: Dihydrodipico 56.2 12 0.00027 31.5 3.2 77 317-399 1-102 (124)
205 PF11071 DUF2872: Protein of u 55.1 38 0.00082 29.1 5.8 68 356-425 67-139 (141)
206 cd01080 NAD_bind_m-THF_DH_Cycl 53.3 40 0.00087 30.2 6.2 52 314-368 42-94 (168)
207 PF15024 Glyco_transf_18: Glyc 52.7 43 0.00094 35.8 7.1 49 343-396 324-372 (559)
208 PRK05282 (alpha)-aspartyl dipe 51.7 99 0.0021 29.3 8.8 65 330-398 52-123 (233)
209 KOG1021 Acetylglucosaminyltran 49.7 1E+02 0.0022 32.4 9.5 95 316-413 290-395 (464)
210 PF12738 PTCB-BRCT: twin BRCT 48.7 93 0.002 22.4 6.6 59 318-394 2-61 (63)
211 PRK13234 nifH nitrogenase redu 48.2 20 0.00043 35.1 3.7 41 1-42 1-41 (295)
212 KOG3349 Predicted glycosyltran 48.2 1.1E+02 0.0023 27.2 7.7 37 352-395 71-107 (170)
213 TIGR02069 cyanophycinase cyano 48.2 1.3E+02 0.0028 28.8 9.2 70 329-399 46-127 (250)
214 PLN02928 oxidoreductase family 48.0 66 0.0014 32.4 7.5 85 314-399 157-266 (347)
215 PF11440 AGT: DNA alpha-glucos 46.6 2.2E+02 0.0048 28.0 10.2 137 261-426 186-351 (355)
216 PRK06027 purU formyltetrahydro 46.1 1.2E+02 0.0025 29.8 8.6 56 3-62 88-144 (286)
217 PLN02670 transferase, transfer 45.8 3.4E+02 0.0074 28.6 12.6 56 6-62 8-66 (472)
218 PLN02210 UDP-glucosyl transfer 45.2 2.7E+02 0.0058 29.2 11.7 39 4-43 8-48 (456)
219 PRK06932 glycerate dehydrogena 44.6 76 0.0017 31.4 7.2 83 316-399 147-237 (314)
220 PRK08410 2-hydroxyacid dehydro 43.5 1E+02 0.0022 30.4 8.0 84 315-399 144-236 (311)
221 PF01975 SurE: Survival protei 43.5 42 0.00091 30.9 4.8 38 6-45 2-39 (196)
222 COG0111 SerA Phosphoglycerate 43.4 1E+02 0.0022 30.8 7.9 82 316-399 142-237 (324)
223 TIGR01658 EYA-cons_domain eyes 42.7 54 0.0012 31.4 5.4 44 313-363 227-270 (274)
224 PRK06487 glycerate dehydrogena 41.9 91 0.002 30.9 7.3 84 315-399 147-237 (317)
225 PRK00994 F420-dependent methyl 41.5 1.5E+02 0.0033 28.3 8.0 38 5-42 3-40 (277)
226 TIGR00262 trpA tryptophan synt 40.5 3.4E+02 0.0073 26.0 11.4 126 257-414 88-228 (256)
227 cd00027 BRCT Breast Cancer Sup 40.4 1.1E+02 0.0024 21.3 6.0 62 317-395 2-65 (72)
228 PLN02992 coniferyl-alcohol glu 40.2 4.7E+02 0.01 27.6 12.8 56 6-62 7-65 (481)
229 PF13905 Thioredoxin_8: Thiore 39.9 1.7E+02 0.0037 22.5 7.7 47 315-364 34-80 (95)
230 TIGR03646 YtoQ_fam YtoQ family 39.9 76 0.0017 27.3 5.3 66 357-424 71-141 (144)
231 PTZ00182 3-methyl-2-oxobutanat 38.8 1.1E+02 0.0024 30.9 7.5 107 317-426 234-355 (355)
232 PF10686 DUF2493: Protein of u 38.7 1.7E+02 0.0038 22.1 8.1 59 260-348 6-66 (71)
233 PRK13011 formyltetrahydrofolat 38.5 2.3E+02 0.005 27.7 9.4 56 3-62 88-144 (286)
234 PRK13940 glutamyl-tRNA reducta 37.8 1.4E+02 0.0031 30.9 8.2 84 314-402 179-278 (414)
235 KOG2884 26S proteasome regulat 37.5 2.2E+02 0.0049 26.8 8.4 26 259-286 109-135 (259)
236 cd03146 GAT1_Peptidase_E Type 36.6 1.8E+02 0.0039 26.9 8.0 80 316-397 31-123 (212)
237 TIGR00288 conserved hypothetic 36.1 1.6E+02 0.0034 26.3 7.1 68 270-368 88-155 (160)
238 KOG4626 O-linked N-acetylgluco 35.8 1.9E+02 0.0042 31.6 8.7 75 314-395 786-865 (966)
239 COG2984 ABC-type uncharacteriz 35.8 1.6E+02 0.0035 29.3 7.7 83 314-398 156-249 (322)
240 COG2099 CobK Precorrin-6x redu 35.4 3.9E+02 0.0085 25.7 10.0 66 331-397 162-231 (257)
241 PRK10017 colanic acid biosynth 34.5 1.2E+02 0.0027 31.4 7.2 46 354-399 110-161 (426)
242 PRK15438 erythronate-4-phospha 34.4 1.4E+02 0.0031 30.5 7.4 85 314-399 114-211 (378)
243 PF10649 DUF2478: Protein of u 34.4 55 0.0012 29.1 3.9 37 359-395 91-130 (159)
244 PRK13243 glyoxylate reductase; 34.4 1.2E+02 0.0026 30.3 6.9 84 315-399 149-244 (333)
245 TIGR00639 PurN phosphoribosylg 34.0 2.9E+02 0.0063 25.2 8.8 53 6-62 2-57 (190)
246 KOG3339 Predicted glycosyltran 33.4 2E+02 0.0043 26.5 7.2 23 9-31 42-64 (211)
247 PRK15409 bifunctional glyoxyla 32.8 1.4E+02 0.003 29.7 7.0 84 315-399 144-240 (323)
248 PRK10494 hypothetical protein; 32.8 1.9E+02 0.0041 27.8 7.7 78 314-397 119-210 (259)
249 cd05312 NAD_bind_1_malic_enz N 32.2 3.2E+02 0.0069 26.7 9.1 39 354-394 96-138 (279)
250 cd05565 PTS_IIB_lactose PTS_II 31.7 1.2E+02 0.0026 24.6 5.2 72 319-395 4-79 (99)
251 COG1519 KdtA 3-deoxy-D-manno-o 31.1 4.5E+02 0.0098 27.3 10.3 104 252-395 44-153 (419)
252 COG0036 Rpe Pentose-5-phosphat 31.0 3.4E+02 0.0074 25.5 8.7 53 315-368 85-138 (220)
253 cd03129 GAT1_Peptidase_E_like 30.9 2.5E+02 0.0053 25.7 8.0 83 316-398 29-124 (210)
254 CHL00200 trpA tryptophan synth 30.7 5E+02 0.011 25.0 11.9 125 257-414 92-232 (263)
255 PRK13010 purU formyltetrahydro 30.7 2.9E+02 0.0062 27.1 8.6 56 3-62 92-148 (289)
256 PRK06849 hypothetical protein; 30.4 5.8E+02 0.012 25.7 13.6 38 1-43 1-38 (389)
257 PRK13789 phosphoribosylamine-- 30.3 6.3E+02 0.014 26.1 14.0 38 1-44 1-38 (426)
258 PRK00676 hemA glutamyl-tRNA re 30.3 2.6E+02 0.0055 28.2 8.3 88 314-402 172-266 (338)
259 TIGR00655 PurU formyltetrahydr 30.2 3.7E+02 0.008 26.2 9.3 56 3-62 83-139 (280)
260 PLN02331 phosphoribosylglycina 30.1 3.2E+02 0.007 25.3 8.5 53 7-62 2-56 (207)
261 COG0373 HemA Glutamyl-tRNA red 29.8 5.7E+02 0.012 26.5 10.9 77 317-403 203-280 (414)
262 TIGR01035 hemA glutamyl-tRNA r 29.6 2.8E+02 0.0061 28.5 8.9 88 314-402 178-282 (417)
263 PF02571 CbiJ: Precorrin-6x re 29.5 1.5E+02 0.0032 28.4 6.3 80 337-423 166-248 (249)
264 KOG1050 Trehalose-6-phosphate 28.8 3.1E+02 0.0068 30.6 9.4 139 257-423 275-435 (732)
265 TIGR01012 Sa_S2_E_A ribosomal 28.8 2.8E+02 0.0061 25.6 7.7 82 317-403 62-147 (196)
266 COG2875 CobM Precorrin-4 methy 28.4 1.9E+02 0.0041 27.6 6.5 61 317-401 3-63 (254)
267 TIGR03029 EpsG chain length de 28.4 5.1E+02 0.011 24.5 10.0 21 20-41 120-140 (274)
268 PRK08057 cobalt-precorrin-6x r 28.3 1.7E+02 0.0037 28.0 6.5 76 343-425 171-246 (248)
269 PF02441 Flavoprotein: Flavopr 28.0 81 0.0018 26.5 3.9 36 5-42 1-36 (129)
270 COG5017 Uncharacterized conser 27.8 3.8E+02 0.0082 23.5 7.6 54 343-404 48-102 (161)
271 cd03145 GAT1_cyanophycinase Ty 27.4 3.3E+02 0.007 25.2 8.1 84 315-398 30-127 (217)
272 PLN03015 UDP-glucosyl transfer 26.7 7.7E+02 0.017 26.0 29.7 75 343-426 337-424 (470)
273 PTZ00408 NAD-dependent deacety 26.7 4.2E+02 0.009 25.2 8.8 76 342-420 152-229 (242)
274 TIGR02536 eut_hyp ethanolamine 26.5 1.5E+02 0.0033 27.6 5.6 40 358-397 50-99 (207)
275 COG2120 Uncharacterized protei 26.4 5.3E+02 0.011 24.3 9.5 18 25-43 31-48 (237)
276 KOG3076 5'-phosphoribosylglyci 26.2 4.5E+02 0.0098 24.2 8.3 33 100-137 86-118 (206)
277 PRK04020 rps2P 30S ribosomal p 26.1 3.6E+02 0.0077 25.1 7.9 82 317-403 68-153 (204)
278 KOG1250 Threonine/serine dehyd 26.1 7.5E+02 0.016 25.6 11.0 40 315-357 216-255 (457)
279 PRK08306 dipicolinate synthase 25.9 2.6E+02 0.0057 27.3 7.5 76 317-395 3-101 (296)
280 COG1348 NifH Nitrogenase subun 25.7 1.2E+02 0.0025 29.2 4.6 38 4-42 1-38 (278)
281 cd05014 SIS_Kpsf KpsF-like pro 25.4 2.5E+02 0.0054 23.0 6.4 77 318-397 2-83 (128)
282 PRK06015 keto-hydroxyglutarate 25.3 2.7E+02 0.0059 25.7 7.0 11 276-286 42-52 (201)
283 COG4981 Enoyl reductase domain 25.0 75 0.0016 33.9 3.5 49 314-365 122-174 (717)
284 PRK08328 hypothetical protein; 24.6 2E+02 0.0044 26.9 6.3 63 332-399 88-154 (231)
285 COG1647 Esterase/lipase [Gener 24.5 6.2E+02 0.013 24.1 9.1 40 5-45 15-54 (243)
286 cd02071 MM_CoA_mut_B12_BD meth 24.5 3.5E+02 0.0076 22.4 7.1 42 315-360 80-121 (122)
287 cd02040 NifH NifH gene encodes 24.4 86 0.0019 29.6 3.8 39 4-43 1-39 (270)
288 cd00762 NAD_bind_malic_enz NAD 24.3 3.1E+02 0.0068 26.4 7.4 39 354-394 97-139 (254)
289 COG1154 Dxs Deoxyxylulose-5-ph 24.3 1.3E+02 0.0027 32.7 5.1 120 303-425 487-621 (627)
290 PRK05447 1-deoxy-D-xylulose 5- 24.2 3.4E+02 0.0075 27.8 8.1 75 317-395 28-122 (385)
291 PRK13181 hisH imidazole glycer 24.2 4.2E+02 0.0091 23.9 8.2 63 327-397 11-81 (199)
292 PRK08883 ribulose-phosphate 3- 24.1 5.9E+02 0.013 23.7 12.1 82 326-413 93-195 (220)
293 PRK02261 methylaspartate mutas 24.1 4.4E+02 0.0096 22.6 7.8 46 314-361 83-132 (137)
294 TIGR00853 pts-lac PTS system, 24.0 2.1E+02 0.0046 22.9 5.4 69 319-395 7-82 (95)
295 cd05564 PTS_IIB_chitobiose_lic 23.8 2.6E+02 0.0057 22.3 5.9 69 319-395 3-78 (96)
296 COG2085 Predicted dinucleotide 23.8 2.4E+02 0.0051 26.4 6.2 37 100-137 59-95 (211)
297 PRK09620 hypothetical protein; 23.8 6.1E+02 0.013 23.8 9.8 20 22-42 33-52 (229)
298 PRK13869 plasmid-partitioning 23.6 5.1E+02 0.011 26.6 9.5 24 100-123 250-273 (405)
299 KOG0069 Glyoxylate/hydroxypyru 23.5 2.3E+02 0.0051 28.4 6.6 84 316-400 162-258 (336)
300 PF03308 ArgK: ArgK protein; 23.3 3.2E+02 0.0069 26.5 7.2 106 13-138 38-155 (266)
301 COG0489 Mrp ATPases involved i 23.2 6.7E+02 0.014 24.0 10.8 28 12-40 66-93 (265)
302 PLN02735 carbamoyl-phosphate s 23.2 1.3E+03 0.028 27.3 14.1 19 26-45 602-620 (1102)
303 cd01452 VWA_26S_proteasome_sub 23.1 3.5E+02 0.0075 24.7 7.2 57 5-62 108-173 (187)
304 PRK06436 glycerate dehydrogena 23.1 3E+02 0.0065 27.1 7.3 84 315-399 121-213 (303)
305 COG0300 DltE Short-chain dehyd 23.0 2.5E+02 0.0054 27.2 6.5 40 22-62 20-62 (265)
306 PF09949 DUF2183: Uncharacteri 23.0 1.6E+02 0.0035 24.0 4.5 25 314-338 62-88 (100)
307 TIGR03837 efp_adjacent_2 conse 22.8 8.2E+02 0.018 24.9 22.1 47 342-397 243-289 (371)
308 PF05368 NmrA: NmrA-like famil 22.8 2.6E+02 0.0056 25.6 6.6 50 10-62 2-51 (233)
309 PRK00257 erythronate-4-phospha 22.7 3.1E+02 0.0067 28.1 7.5 85 314-399 114-211 (381)
310 PF13407 Peripla_BP_4: Peripla 22.5 6E+02 0.013 23.2 9.4 66 329-397 18-89 (257)
311 PRK00048 dihydrodipicolinate r 22.3 2.1E+02 0.0045 27.3 5.9 43 352-397 51-93 (257)
312 PRK06249 2-dehydropantoate 2-r 22.1 3.1E+02 0.0066 26.8 7.3 33 23-60 19-51 (313)
313 PF00533 BRCT: BRCA1 C Terminu 22.1 1.4E+02 0.003 21.9 3.8 66 314-395 6-72 (78)
314 COG2247 LytB Putative cell wal 21.9 3.1E+02 0.0067 27.4 6.9 76 314-396 75-163 (337)
315 TIGR01501 MthylAspMutase methy 21.8 3.7E+02 0.008 23.2 6.7 41 319-361 85-130 (134)
316 PRK09212 pyruvate dehydrogenas 21.8 3.6E+02 0.0079 26.8 7.7 104 317-426 202-323 (327)
317 PLN02683 pyruvate dehydrogenas 21.6 2.6E+02 0.0056 28.2 6.7 104 318-426 230-350 (356)
318 PRK13398 3-deoxy-7-phosphohept 21.5 4.5E+02 0.0097 25.4 8.0 59 330-395 82-141 (266)
319 PLN02306 hydroxypyruvate reduc 21.4 3.2E+02 0.0069 28.0 7.3 85 314-399 163-276 (386)
320 cd01967 Nitrogenase_MoFe_alpha 21.4 3.4E+02 0.0073 27.6 7.6 72 317-395 161-238 (406)
321 PRK00045 hemA glutamyl-tRNA re 21.4 5.5E+02 0.012 26.4 9.2 87 315-402 181-285 (423)
322 PF11238 DUF3039: Protein of u 21.2 69 0.0015 23.4 1.7 16 379-394 15-30 (58)
323 PF01408 GFO_IDH_MocA: Oxidore 21.2 3E+02 0.0065 22.1 6.0 68 315-395 24-93 (120)
324 cd01715 ETF_alpha The electron 21.0 5.6E+02 0.012 22.4 10.8 113 8-137 3-117 (168)
325 PRK11519 tyrosine kinase; Prov 21.0 1E+03 0.022 26.5 11.7 33 100-133 634-666 (719)
326 PF00551 Formyl_trans_N: Formy 20.9 4.2E+02 0.0091 23.6 7.4 10 100-109 78-87 (181)
327 PRK00346 surE 5'(3')-nucleotid 20.9 7E+02 0.015 23.9 9.1 103 17-135 12-124 (250)
328 cd05005 SIS_PHI Hexulose-6-pho 20.9 3.1E+02 0.0067 24.3 6.4 73 318-395 35-109 (179)
329 PF12146 Hydrolase_4: Putative 20.8 1.2E+02 0.0027 23.3 3.3 38 5-43 16-53 (79)
330 COG0299 PurN Folate-dependent 20.7 6.8E+02 0.015 23.2 9.2 107 6-137 2-110 (200)
331 PRK14138 NAD-dependent deacety 20.4 5.4E+02 0.012 24.3 8.3 79 342-424 156-239 (244)
332 TIGR00715 precor6x_red precorr 20.1 5.3E+02 0.012 24.7 8.2 37 100-136 64-101 (256)
333 PF13689 DUF4154: Domain of un 20.0 5.6E+02 0.012 21.9 8.5 90 314-412 25-123 (145)
No 1
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.3e-59 Score=445.26 Aligned_cols=391 Identities=55% Similarity=0.912 Sum_probs=344.3
Q ss_pred CCCcceEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHH
Q 014316 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLL 80 (427)
Q Consensus 1 ~~~~~~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~ 80 (427)
|.++++++|+|+||+||||||+|||++||+. |++|++++|.++.+..+..++++|++|.++ ..+ .....++.+..
T Consensus 9 ~~~k~ra~vvVLGDvGRSPRMqYHA~Sla~~-gf~VdliGy~~s~p~e~l~~hprI~ih~m~--~l~--~~~~~p~~~~l 83 (444)
T KOG2941|consen 9 KSKKKRAIVVVLGDVGRSPRMQYHALSLAKL-GFQVDLIGYVESIPLEELLNHPRIRIHGMP--NLP--FLQGGPRVLFL 83 (444)
T ss_pred ccccceEEEEEecccCCChHHHHHHHHHHHc-CCeEEEEEecCCCChHHHhcCCceEEEeCC--CCc--ccCCCchhhhh
Confidence 3568999999999999999999999999997 999999999999889999999999999999 332 23445666778
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchh-hhhhhcCCCchHHHHHHHH
Q 014316 81 LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYT-LLSLSLGRRSHFVSIYRWI 159 (427)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~-~~~~~~~~~~~~~~~~~~~ 159 (427)
++|.++|++.++|+++. ...+|++.++|||++|+++++++++.++|.++++||||++|+ .+..+.+..+++.++.+|+
T Consensus 84 ~lKvf~Qfl~Ll~aL~~-~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl~l~~~~g~~h~lV~l~~~~ 162 (444)
T KOG2941|consen 84 PLKVFWQFLSLLWALFV-LRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSLQLKLKLGFQHPLVRLVRWL 162 (444)
T ss_pred HHHHHHHHHHHHHHHHh-ccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHHHHHhhcCCCCchHHHHHHH
Confidence 99999999999999887 689999999999999999999999999999999999999997 7778888999999999999
Q ss_pred HHHHhccCCEEEEcCHHHHHHHHHhhCC-eEEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCc
Q 014316 160 EKYYGKMANGCLCVTQAMQHELAQNWGI-KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA 238 (427)
Q Consensus 160 e~~~~~~ad~vi~vS~~~~~~l~~~~~~-~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (427)
|++++|.||+.+|||++|++++.++||+ ++.|+|+.+++ ++++.+++|++|+++..-.. |. .++ -.+.+..
T Consensus 163 E~~fgk~a~~nLcVT~AMr~dL~qnWgi~ra~v~YDrPps--~~~~l~~~H~lf~~l~~d~~-~f--~ar---~~q~~~~ 234 (444)
T KOG2941|consen 163 EKYFGKLADYNLCVTKAMREDLIQNWGINRAKVLYDRPPS--KPTPLDEQHELFMKLAGDHS-PF--RAR---EPQDKAL 234 (444)
T ss_pred HHHhhcccccchhhHHHHHHHHHHhcCCceeEEEecCCCC--CCCchhHHHHHHhhhccccc-hh--hhc---ccccchh
Confidence 9999999999999999999999999996 69999999776 77888899999999874211 00 000 1123334
Q ss_pred cchhhhcccc-cccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCE
Q 014316 239 DETIFTSLAG-IDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRL 317 (427)
Q Consensus 239 ~~~~~~~~~~-~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (427)
+.++|+.+.. ..+...+++|.+++.+.+|+|++++..|++|+..+.+. -+.+.-++|++
T Consensus 235 ~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~--------------------~~~~~~~lP~l 294 (444)
T KOG2941|consen 235 ERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQ--------------------LYDKTHNLPSL 294 (444)
T ss_pred hhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhh--------------------hhhccCCCCcE
Confidence 4556766544 55667888999999999999999999999999987543 12234468999
Q ss_pred EEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC
Q 014316 318 LFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 318 ~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~ 397 (427)
.++|.|+||.++.+.+.++++++++|.+...|++.||++.+++.||++||+|++|++.++|||+++++.||+||+|.+..
T Consensus 295 lciITGKGPlkE~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fk 374 (444)
T KOG2941|consen 295 LCIITGKGPLKEKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFK 374 (444)
T ss_pred EEEEcCCCchhHHHHHHHHHhcccceeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceecCCcEEEeCChHHHHHHHHHh
Q 014316 398 CIEELVKVDKNGLLFSSSSELADQLLVN 425 (427)
Q Consensus 398 g~~e~v~~~~~G~l~~~~~~la~~l~~~ 425 (427)
++.|+|+|++||++|+|.++||++|..+
T Consensus 375 cl~ELVkh~eNGlvF~Ds~eLa~ql~~l 402 (444)
T KOG2941|consen 375 CLDELVKHGENGLVFEDSEELAEQLQML 402 (444)
T ss_pred hHHHHHhcCCCceEeccHHHHHHHHHHH
Confidence 9999999999999999999999998754
No 2
>PLN02275 transferase, transferring glycosyl groups
Probab=100.00 E-value=2.4e-48 Score=393.12 Aligned_cols=370 Identities=79% Similarity=1.255 Sum_probs=288.6
Q ss_pred CCCcceEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHH
Q 014316 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLL 80 (427)
Q Consensus 1 ~~~~~~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~ 80 (427)
|++++++.|++++++|..+|+..++..++++.+++|+|+|+.+.....+..+..++++++++. +.....+.+..+.+..
T Consensus 1 ~~~~~~~~~~~~~~~g~~~r~~~~~~~l~~~~~~~v~vi~~~~~~~~~~~~~~~~v~v~r~~~-~~~~~~~~~~~~~~~~ 79 (371)
T PLN02275 1 MGRRGRAAVVVLGDFGRSPRMQYHALSLARQASFQVDVVAYGGSEPIPALLNHPSIHIHLMVQ-PRLLQRLPRVLYALAL 79 (371)
T ss_pred CCCccEEEEEEecCCCCCHHHHHHHHHHHhcCCceEEEEEecCCCCCHHHhcCCcEEEEECCC-cccccccccchHHHHH
Confidence 899999999999999999999999999999733589999998766566666777899999983 2222223334443334
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHH
Q 014316 81 LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIE 160 (427)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e 160 (427)
+.+..+.+..++|.+..+..+||+||+|+|+.+...+.+++++++.+.|+|+++|+.++........+...+.++++++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~e 159 (371)
T PLN02275 80 LLKVAIQFLMLLWFLCVKIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYTLLALSLGRSHPLVRLYRWYE 159 (371)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHHHHhcccCCCCHHHHHHHHHH
Confidence 55555555666666555668999999999887777676888888899999999999844332222223455567889999
Q ss_pred HHHhccCCEEEEcCHHHHHHHHHhhCCeEEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccc
Q 014316 161 KYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADE 240 (427)
Q Consensus 161 ~~~~~~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (427)
+++++.+|.++++|+.+++.+.+.++.++.+|||++.+.|.+.... +
T Consensus 160 ~~~~~~ad~ii~~S~~~~~~l~~~~g~~i~vi~n~~~~~f~~~~~~---~------------------------------ 206 (371)
T PLN02275 160 RHYGKMADGHLCVTKAMQHELDQNWGIRATVLYDQPPEFFRPASLE---I------------------------------ 206 (371)
T ss_pred HHHHhhCCEEEECCHHHHHHHHHhcCCCeEEECCCCHHHcCcCCch---h------------------------------
Confidence 9999999999999999999998777777889999965556543210 0
Q ss_pred hhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEE
Q 014316 241 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFI 320 (427)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 320 (427)
....+.+.+++++||+.+.||++.+++|+..+..+.+...+.++ ..++.....|+++|+
T Consensus 207 -----------~~~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~----------~~~~~~~~~~~i~l~ 265 (371)
T PLN02275 207 -----------RLRPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESD----------SASGKQSLYPRLLFI 265 (371)
T ss_pred -----------cccCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhcccccc----------ccccccccCCCeEEE
Confidence 11122345788999999999999999999988643211111000 000111235789999
Q ss_pred EEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccc
Q 014316 321 ITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIE 400 (427)
Q Consensus 321 i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~ 400 (427)
|+|+|+.+++++++++++++++|.|.++|++.++++.+|++||++|+|..++.+|++|++++||||||+|||+|+.||.+
T Consensus 266 ivG~G~~~~~l~~~~~~~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~ 345 (371)
T PLN02275 266 ITGKGPQKAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIG 345 (371)
T ss_pred EEeCCCCHHHHHHHHHHcCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChH
Confidence 99999999999999999999999998877999999999999999998654455699999999999999999999999999
Q ss_pred cceecCCcEEEeCChHHHHHHHHHh
Q 014316 401 ELVKVDKNGLLFSSSSELADQLLVN 425 (427)
Q Consensus 401 e~v~~~~~G~l~~~~~~la~~l~~~ 425 (427)
|+|+++.+|++++++++||++|.++
T Consensus 346 eiv~~g~~G~lv~~~~~la~~i~~l 370 (371)
T PLN02275 346 ELVKDGKNGLLFSSSSELADQLLEL 370 (371)
T ss_pred HHccCCCCeEEECCHHHHHHHHHHh
Confidence 9999999999999999999999875
No 3
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=100.00 E-value=1.1e-45 Score=378.99 Aligned_cols=375 Identities=56% Similarity=0.940 Sum_probs=283.6
Q ss_pred CcceEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHH
Q 014316 3 RRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLL 82 (427)
Q Consensus 3 ~~~~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 82 (427)
+++|+++++++++|...|+.+++.+|+++ ||+|+|+|+.......+.....|++++.++ ..+ ....+..+.+..+.
T Consensus 2 ~~~~~~~~~~~~~~~~~R~~~~a~~L~~~-G~~V~ii~~~~~~~~~~~~~~~~v~~~~~~--~~~-~~~~~~~~~~~~~~ 77 (415)
T cd03816 2 KRKRVCVLVLGDIGRSPRMQYHALSLAKH-GWKVDLVGYLETPPHDEILSNPNITIHPLP--PPP-QRLNKLPFLLFAPL 77 (415)
T ss_pred CccEEEEEEecccCCCHHHHHHHHHHHhc-CceEEEEEecCCCCCHHHhcCCCEEEEECC--CCc-cccccchHHHHHHH
Confidence 57899999999999999999999999996 999999998765534343556799999998 322 11223344444555
Q ss_pred HHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHH
Q 014316 83 KPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKY 162 (427)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~ 162 (427)
+.+.+++.+++.++. ..+||+||+|+|+.++..+++++++++.+.|+|+++|++.++......+....+.+++.++|++
T Consensus 78 ~~~~~~~~~~~~l~~-~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~ 156 (415)
T cd03816 78 KVLWQFFSLLWLLYK-LRPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTILALKLGENHPLVRLAKWYEKL 156 (415)
T ss_pred HHHHHHHHHHHHHHh-cCCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHHhcccCCCCHHHHHHHHHHHH
Confidence 555555555555443 4689999999988887777788888888999999999985444333333345556788999999
Q ss_pred HhccCCEEEEcCHHHHHHHHHhhCC---eEEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCcc
Q 014316 163 YGKMANGCLCVTQAMQHELAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKAD 239 (427)
Q Consensus 163 ~~~~ad~vi~vS~~~~~~l~~~~~~---~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (427)
+++.+|.++|+|+.+++++.+ ++. ++.+|||++...|.|.+.......+..+.. .+. .
T Consensus 157 ~~~~ad~ii~vS~~~~~~l~~-~~~~~~ki~vI~Ng~~~~f~p~~~~~~~~~~~~~~~-~~~-----------------~ 217 (415)
T cd03816 157 FGRLADYNLCVTKAMKEDLQQ-FNNWKIRATVLYDRPPEQFRPLPLEEKHELFLKLAK-TFL-----------------T 217 (415)
T ss_pred HhhcCCEeeecCHHHHHHHHh-hhccCCCeeecCCCCHHHceeCcHHHHHHHHHhccc-ccc-----------------c
Confidence 999999999999999999976 443 389999997666766643322221111000 000 0
Q ss_pred chhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEE
Q 014316 240 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF 319 (427)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 319 (427)
... ........++++.+++++||+.+.||++.|++|++.+.+.... ....|+++|
T Consensus 218 ~~~----~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~---------------------~~~~~~i~l 272 (415)
T cd03816 218 REL----RIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAAT---------------------GPKLPKLLC 272 (415)
T ss_pred ccc----ccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhhcc---------------------cccCCCEEE
Confidence 000 0000122334556888999999999999999999998753000 012478999
Q ss_pred EEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcc
Q 014316 320 IITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI 399 (427)
Q Consensus 320 ~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~ 399 (427)
+|+|+|+.++++++++++++++++.|.++|++.++++++|++||++++|+.++.+|++|++++||||||+|||+|+.||.
T Consensus 273 ~ivG~G~~~~~l~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~ 352 (415)
T cd03816 273 IITGKGPLKEKYLERIKELKLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCI 352 (415)
T ss_pred EEEecCccHHHHHHHHHHcCCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCH
Confidence 99999999999999999999998887765699999999999999999765555678999999999999999999999999
Q ss_pred ccceecCCcEEEeCChHHHHHHHHHhc
Q 014316 400 EELVKVDKNGLLFSSSSELADQLLVNA 426 (427)
Q Consensus 400 ~e~v~~~~~G~l~~~~~~la~~l~~~~ 426 (427)
.|+++++.+|++++|++++|++|.++.
T Consensus 353 ~eiv~~~~~G~lv~d~~~la~~i~~ll 379 (415)
T cd03816 353 DELVKHGENGLVFGDSEELAEQLIDLL 379 (415)
T ss_pred HHHhcCCCCEEEECCHHHHHHHHHHHH
Confidence 999999999999999999999998763
No 4
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=2.7e-36 Score=307.60 Aligned_cols=311 Identities=14% Similarity=0.128 Sum_probs=225.3
Q ss_pred CCCChh-HHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCC-CCCcchhhHHHHHHHHHHHHHHHH
Q 014316 15 LGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIP-RGLPKVLKPVLLLLKPLIQFFMLL 92 (427)
Q Consensus 15 ~~~~~r-~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 92 (427)
.|+..+ +...+..|+++ ||+|+|+|...+..........+++++++|...... ..+......+..+.+.+
T Consensus 13 ~GG~e~~~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~i~v~~~p~~~~~~~~~~~~~~~~~~~l~~~~------- 84 (398)
T cd03796 13 LGGVETHIYQLSQCLIKR-GHKVVVITHAYGNRVGIRYLTNGLKVYYLPFVVFYNQSTLPTFFGTFPLLRNIL------- 84 (398)
T ss_pred cccHHHHHHHHHHHHHHc-CCeeEEEeccCCcCCCcccccCceeEEEecceeccCCccccchhhhHHHHHHHH-------
Confidence 444444 45567788885 999999997543222222234589999998321100 01111111112222222
Q ss_pred HHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEE
Q 014316 93 WFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLC 172 (427)
Q Consensus 93 ~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~ 172 (427)
+..+||+||+|++..... ..+.++++..++|+|++.|+. +. ..........+++++..+.+|.+++
T Consensus 85 -----~~~~~DiIh~~~~~~~~~-~~~~~~~~~~~~~~v~t~h~~-~~-------~~~~~~~~~~~~~~~~~~~~d~ii~ 150 (398)
T cd03796 85 -----IRERITIVHGHQAFSALA-HEALLHARTMGLKTVFTDHSL-FG-------FADASSIHTNKLLRFSLADVDHVIC 150 (398)
T ss_pred -----HhcCCCEEEECCCCchHH-HHHHHHhhhcCCcEEEEeccc-cc-------ccchhhHHhhHHHHHhhccCCEEEE
Confidence 237899999998543322 225566778899999999986 21 1111112234566777889999999
Q ss_pred cCHHHHHHHHHhhCC---eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccc
Q 014316 173 VTQAMQHELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAG 248 (427)
Q Consensus 173 vS~~~~~~l~~~~~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (427)
+|+..++.+....+. ++.+|||| |.+.|.+...
T Consensus 151 ~s~~~~~~~~~~~~~~~~k~~vi~ngvd~~~f~~~~~------------------------------------------- 187 (398)
T cd03796 151 VSHTSKENTVLRASLDPERVSVIPNAVDSSDFTPDPS------------------------------------------- 187 (398)
T ss_pred ecHhHhhHHHHHhCCChhhEEEEcCccCHHHcCCCcc-------------------------------------------
Confidence 999998876443343 38899999 6665644320
Q ss_pred cccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh
Q 014316 249 IDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 328 (427)
Q Consensus 249 ~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~ 328 (427)
. ..++.++++|+||+.+.||++.|++|++.+.+. .|+++|+++|+|+..
T Consensus 188 ---~-~~~~~~~i~~~grl~~~Kg~~~li~a~~~l~~~---------------------------~~~~~l~i~G~g~~~ 236 (398)
T cd03796 188 ---K-RDNDKITIVVISRLVYRKGIDLLVGIIPEICKK---------------------------HPNVRFIIGGDGPKR 236 (398)
T ss_pred ---c-CCCCceEEEEEeccchhcCHHHHHHHHHHHHhh---------------------------CCCEEEEEEeCCchH
Confidence 0 112345899999999999999999999998775 789999999999999
Q ss_pred HHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCC
Q 014316 329 ESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDK 407 (427)
Q Consensus 329 ~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~ 407 (427)
+.+++++++++++ +|.|+|. ++.+++.++|++||++++| |..|++|++++||||||+|||+|++||.+|++.++.
T Consensus 237 ~~l~~~~~~~~l~~~v~~~G~-~~~~~~~~~l~~ad~~v~p---S~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~ 312 (398)
T cd03796 237 ILLEEMREKYNLQDRVELLGA-VPHERVRDVLVQGHIFLNT---SLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPDM 312 (398)
T ss_pred HHHHHHHHHhCCCCeEEEeCC-CCHHHHHHHHHhCCEEEeC---ChhhccCHHHHHHHHcCCCEEECCCCCchhheeCCc
Confidence 9999999999995 6999997 9999999999999999997 777999999999999999999999999999998765
Q ss_pred cEEEeCChHHHHHHHHHh
Q 014316 408 NGLLFSSSSELADQLLVN 425 (427)
Q Consensus 408 ~G~l~~~~~~la~~l~~~ 425 (427)
.++...|.++++++|.++
T Consensus 313 ~~~~~~~~~~l~~~l~~~ 330 (398)
T cd03796 313 ILLAEPDVESIVRKLEEA 330 (398)
T ss_pred eeecCCCHHHHHHHHHHH
Confidence 444337889999998865
No 5
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=5.8e-36 Score=306.19 Aligned_cols=340 Identities=17% Similarity=0.191 Sum_probs=237.1
Q ss_pred eEEEEEe---CCCCCCh-hHHHHHHHHHhhCCCcEEEEecCCCCCc-----------ccccCCCceEEEEeecCCCCCCC
Q 014316 6 RACVVVL---GDLGRSP-RMQYQALSLARQMSLEVDVVAYGGSKPH-----------AAILEHPSIHIHTMTQWPTIPRG 70 (427)
Q Consensus 6 ~~~v~~~---~~~~~~~-r~~~~a~~La~~~g~~V~vi~~~~~~~~-----------~~~~~~~~i~v~~~~~~~~~~~~ 70 (427)
+++++.. .+.|+.+ ++...+..|.++ ||+|+|+|.....+. ......+|+++++++.+.. ..
T Consensus 2 kIlii~~~~~P~~~g~~~~~~~l~~~L~~~-G~~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~~~~--~~ 78 (412)
T PRK10307 2 KILVYGINYAPELTGIGKYTGEMAEWLAAR-GHEVRVITAPPYYPQWRVGEGYSAWRYRRESEGGVTVWRCPLYVP--KQ 78 (412)
T ss_pred eEEEEecCCCCCccchhhhHHHHHHHHHHC-CCeEEEEecCCCCCCCCCCcccccccceeeecCCeEEEEccccCC--CC
Confidence 4555553 3334333 455677888886 999999996532110 0112246999999984321 11
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHhh-hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcC--
Q 014316 71 LPKVLKPVLLLLKPLIQFFMLLWFLCVK-IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLG-- 147 (427)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~-- 147 (427)
.....+.... ..+... .+..+..+ ..+||+||+|+|+.... ..+.+++++.++|+++++||+.. ......+
T Consensus 79 ~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~Div~~~~p~~~~~-~~~~~~~~~~~~~~v~~~~d~~~-~~~~~~~~~ 152 (412)
T PRK10307 79 PSGLKRLLHL-GSFALS---SFFPLLAQRRWRPDRVIGVVPTLFCA-PGARLLARLSGARTWLHIQDYEV-DAAFGLGLL 152 (412)
T ss_pred ccHHHHHHHH-HHHHHH---HHHHHhhccCCCCCEEEEeCCcHHHH-HHHHHHHHhhCCCEEEEeccCCH-HHHHHhCCc
Confidence 1111111111 111111 11111111 26899999998664433 33677888889999999999833 2211111
Q ss_pred CCchHHHHHHHHHHHHhccCCEEEEcCHHHHHHHHHhhCC---eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCC
Q 014316 148 RRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPL 223 (427)
Q Consensus 148 ~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 223 (427)
+...+.++..++|+++++.||.++++|+.+++.+.+. +. ++.+|||| +.+.|.+........+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~-~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~--------- 222 (412)
T PRK10307 153 KGGKVARLATAFERSLLRRFDNVSTISRSMMNKAREK-GVAAEKVIFFPNWSEVARFQPVADADVDALRAQ--------- 222 (412)
T ss_pred cCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHHHHc-CCCcccEEEECCCcCHhhcCCCCccchHHHHHH---------
Confidence 2344456677889999999999999999999998764 43 38899999 7666655432111121111
Q ss_pred CccccccCCCCCCCccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhh
Q 014316 224 GVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFL 303 (427)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~ 303 (427)
.+.+. +..+++|+|++.+.||++.|++|++.+.+
T Consensus 223 ---------------------------~~~~~-~~~~i~~~G~l~~~kg~~~li~a~~~l~~------------------ 256 (412)
T PRK10307 223 ---------------------------LGLPD-GKKIVLYSGNIGEKQGLELVIDAARRLRD------------------ 256 (412)
T ss_pred ---------------------------cCCCC-CCEEEEEcCccccccCHHHHHHHHHHhcc------------------
Confidence 12333 34589999999999999999999998743
Q ss_pred hhhcCCcccCCCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCC----Cch
Q 014316 304 KEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLD----LPM 379 (427)
Q Consensus 304 ~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~----~p~ 379 (427)
.++++|+|+|+|+..++++++++++++++|.|+|. ++.+++.++|++||++++| |..|+ +|+
T Consensus 257 ----------~~~~~l~ivG~g~~~~~l~~~~~~~~l~~v~f~G~-~~~~~~~~~~~~aDi~v~p---s~~e~~~~~~p~ 322 (412)
T PRK10307 257 ----------RPDLIFVICGQGGGKARLEKMAQCRGLPNVHFLPL-QPYDRLPALLKMADCHLLP---QKAGAADLVLPS 322 (412)
T ss_pred ----------CCCeEEEEECCChhHHHHHHHHHHcCCCceEEeCC-CCHHHHHHHHHhcCEeEEe---eccCcccccCcH
Confidence 57899999999999999999999999989999997 9999999999999999997 33344 799
Q ss_pred HHHHHHcCCCcEEEeccCc--cccceecCCcEEEe--CChHHHHHHHHHhc
Q 014316 380 KVVDMFGCGLPVCAVSYSC--IEELVKVDKNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 380 ~~lEama~G~PVIas~~~g--~~e~v~~~~~G~l~--~~~~~la~~l~~~~ 426 (427)
+++||||||+|||+|+.+| ..|++. ++|+++ +|+++||++|.++.
T Consensus 323 kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~ 371 (412)
T PRK10307 323 KLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALA 371 (412)
T ss_pred HHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHH
Confidence 9999999999999999876 468886 699999 67899999998763
No 6
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=1.7e-35 Score=298.11 Aligned_cols=325 Identities=20% Similarity=0.229 Sum_probs=233.9
Q ss_pred cceEEEEEeCCCCCChhHHH-HHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHH
Q 014316 4 RGRACVVVLGDLGRSPRMQY-QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLL 82 (427)
Q Consensus 4 ~~~~~v~~~~~~~~~~r~~~-~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~ 82 (427)
++.++|+...+.||.+++.. .+..|.++ ||+++|++........+.....|+++++++. ... ........+.
T Consensus 2 ~~il~ii~~~~~GG~e~~~~~l~~~l~~~-~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~~--~~~----~~~~~~~~l~ 74 (374)
T TIGR03088 2 PLIVHVVYRFDVGGLENGLVNLINHLPAD-RYRHAVVALTEVSAFRKRIQRPDVAFYALHK--QPG----KDVAVYPQLY 74 (374)
T ss_pred ceEEEEeCCCCCCcHHHHHHHHHhhcccc-ccceEEEEcCCCChhHHHHHhcCceEEEeCC--CCC----CChHHHHHHH
Confidence 45666766677777766543 35566664 8999999865433333444456899998872 111 1222223333
Q ss_pred HHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcE-EEEecccchhhhhhhcCCCchHHHHHHHHHH
Q 014316 83 KPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAF-IVDWHNFGYTLLSLSLGRRSHFVSIYRWIEK 161 (427)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~-i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~ 161 (427)
+.+.+ .+||+||+|++ .+.. +.++++..++|. +++.|+... . ........+.++++
T Consensus 75 ~~l~~------------~~~Divh~~~~---~~~~-~~~~~~~~~~~~~i~~~h~~~~--~-----~~~~~~~~~~~~~~ 131 (374)
T TIGR03088 75 RLLRQ------------LRPDIVHTRNL---AALE-AQLPAALAGVPARIHGEHGRDV--F-----DLDGSNWKYRWLRR 131 (374)
T ss_pred HHHHH------------hCCCEEEEcch---hHHH-HHHHHHhcCCCeEEEeecCccc--c-----cchhhHHHHHHHHH
Confidence 33332 79999999983 3322 445566667775 455565421 0 11111223456777
Q ss_pred HHhccCCEEEEcCHHHHHHHHHhhCCe---EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCC
Q 014316 162 YYGKMANGCLCVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQK 237 (427)
Q Consensus 162 ~~~~~ad~vi~vS~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (427)
++.+.+|.++++|+.+++.+.+.++.+ +.+|||| +.+.|.+..... ......
T Consensus 132 ~~~~~~~~~i~vs~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~-~~~~~~----------------------- 187 (374)
T TIGR03088 132 LYRPLIHHYVAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERFHPSRGDR-SPILPP----------------------- 187 (374)
T ss_pred HHHhcCCeEEEeCHHHHHHHHHhcCCChhhEEEeccCccccccCCCccch-hhhhHh-----------------------
Confidence 788889999999999999998877653 7899999 777775542111 110000
Q ss_pred ccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCE
Q 014316 238 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRL 317 (427)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (427)
....+++.+++++||+.++||++.+++|++.+.++... ..+++
T Consensus 188 --------------~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~-----------------------~~~~~ 230 (374)
T TIGR03088 188 --------------DFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPE-----------------------GAERL 230 (374)
T ss_pred --------------hcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcc-----------------------cccce
Confidence 11223456999999999999999999999998765100 02479
Q ss_pred EEEEEeCCCChHHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEecc
Q 014316 318 LFIITGKGPDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 396 (427)
Q Consensus 318 ~l~i~G~G~~~~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~ 396 (427)
+|+++|+|+..+++++.+++++++ +|.|.|. .+++.++|++||++|+| |..|+||++++|||+||+|||+|+.
T Consensus 231 ~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~adi~v~p---S~~Eg~~~~~lEAma~G~Pvv~s~~ 304 (374)
T TIGR03088 231 RLVIVGDGPARGACEQMVRAAGLAHLVWLPGE---RDDVPALMQALDLFVLP---SLAEGISNTILEAMASGLPVIATAV 304 (374)
T ss_pred EEEEecCCchHHHHHHHHHHcCCcceEEEcCC---cCCHHHHHHhcCEEEec---cccccCchHHHHHHHcCCCEEEcCC
Confidence 999999999999999999999996 6899887 88999999999999997 7789999999999999999999999
Q ss_pred CccccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 397 SCIEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 397 ~g~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
||.+|++.++.+|+++ +|++++|++|.++
T Consensus 305 ~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l 335 (374)
T TIGR03088 305 GGNPELVQHGVTGALVPPGDAVALARALQPY 335 (374)
T ss_pred CCcHHHhcCCCceEEeCCCCHHHHHHHHHHH
Confidence 9999999999999999 5789999999865
No 7
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=6e-35 Score=303.82 Aligned_cols=326 Identities=19% Similarity=0.240 Sum_probs=225.3
Q ss_pred cceEEEEEe-CCCCCCh----hHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCC-CCcchhhH
Q 014316 4 RGRACVVVL-GDLGRSP----RMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPR-GLPKVLKP 77 (427)
Q Consensus 4 ~~~~~v~~~-~~~~~~~----r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~-~~~~~~~~ 77 (427)
+++|++++. ..+...+ ++...+..|.++ ||+|+|+|.....+ + ...+++++.++.++.+.. ........
T Consensus 58 ~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~-G~eV~vlt~~~~~~--~--~~~g~~v~~~~~~~~~~~~~~~~~~~~ 132 (465)
T PLN02871 58 PRRIALFVEPSPFSYVSGYKNRFQNFIRYLREM-GDEVLVVTTDEGVP--Q--EFHGAKVIGSWSFPCPFYQKVPLSLAL 132 (465)
T ss_pred CceEEEEECCcCCcccccHHHHHHHHHHHHHHC-CCeEEEEecCCCCC--c--cccCceeeccCCcCCccCCCceeeccC
Confidence 455665553 3232223 455566777775 99999999765431 1 123666665542211111 00000000
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHH
Q 014316 78 VLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYR 157 (427)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~ 157 (427)
...+.+.+ +..+||+||+|+|... .+.+.++++..++|+|+++|+.. ....... ....+.+...
T Consensus 133 ~~~l~~~i------------~~~kpDiIh~~~~~~~--~~~~~~~ak~~~ip~V~~~h~~~-~~~~~~~-~~~~~~~~~~ 196 (465)
T PLN02871 133 SPRIISEV------------ARFKPDLIHASSPGIM--VFGALFYAKLLCVPLVMSYHTHV-PVYIPRY-TFSWLVKPMW 196 (465)
T ss_pred CHHHHHHH------------HhCCCCEEEECCCchh--HHHHHHHHHHhCCCEEEEEecCc-hhhhhcc-cchhhHHHHH
Confidence 01122222 2379999999985422 23355567778999999999862 2111111 1112222234
Q ss_pred HHHHHHhccCCEEEEcCHHHHHHHHHhh---CCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCC
Q 014316 158 WIEKYYGKMANGCLCVTQAMQHELAQNW---GIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGM 233 (427)
Q Consensus 158 ~~e~~~~~~ad~vi~vS~~~~~~l~~~~---~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (427)
.+++++.+.+|.++++|+.+++.+.+.+ ..++.+++|| |.+.|.+.... .+...++.
T Consensus 197 ~~~r~~~~~ad~ii~~S~~~~~~l~~~~~~~~~kv~vi~nGvd~~~f~p~~~~--~~~~~~~~----------------- 257 (465)
T PLN02871 197 DIIRFLHRAADLTLVTSPALGKELEAAGVTAANRIRVWNKGVDSESFHPRFRS--EEMRARLS----------------- 257 (465)
T ss_pred HHHHHHHhhCCEEEECCHHHHHHHHHcCCCCcCeEEEeCCccCccccCCcccc--HHHHHHhc-----------------
Confidence 5678888999999999999999998764 2348899999 87777654311 11111110
Q ss_pred CCCCccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccC
Q 014316 234 EGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYL 313 (427)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (427)
...+++ .+|+|+||+.++||++.|+++++.
T Consensus 258 ------------------~~~~~~-~~i~~vGrl~~~K~~~~li~a~~~------------------------------- 287 (465)
T PLN02871 258 ------------------GGEPEK-PLIVYVGRLGAEKNLDFLKRVMER------------------------------- 287 (465)
T ss_pred ------------------CCCCCC-eEEEEeCCCchhhhHHHHHHHHHh-------------------------------
Confidence 112233 489999999999999999999876
Q ss_pred CCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEE
Q 014316 314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA 393 (427)
Q Consensus 314 ~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIa 393 (427)
.++++|+|+|+|++.+++++++++. +|.|+|. ++.+++.++|++||++|+| |..|++|++++||||||+|||+
T Consensus 288 ~~~~~l~ivG~G~~~~~l~~~~~~~---~V~f~G~-v~~~ev~~~~~~aDv~V~p---S~~E~~g~~vlEAmA~G~PVI~ 360 (465)
T PLN02871 288 LPGARLAFVGDGPYREELEKMFAGT---PTVFTGM-LQGDELSQAYASGDVFVMP---SESETLGFVVLEAMASGVPVVA 360 (465)
T ss_pred CCCcEEEEEeCChHHHHHHHHhccC---CeEEecc-CCHHHHHHHHHHCCEEEEC---CcccccCcHHHHHHHcCCCEEE
Confidence 4689999999999888888877643 6999998 9999999999999999997 7779999999999999999999
Q ss_pred eccCccccceec---CCcEEEe--CChHHHHHHHHHhc
Q 014316 394 VSYSCIEELVKV---DKNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 394 s~~~g~~e~v~~---~~~G~l~--~~~~~la~~l~~~~ 426 (427)
|+.||+.|++.+ +.+|+++ +|+++++++|.++.
T Consensus 361 s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll 398 (465)
T PLN02871 361 ARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLL 398 (465)
T ss_pred cCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHH
Confidence 999999999998 9999999 57899999998764
No 8
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=1.2e-34 Score=295.06 Aligned_cols=328 Identities=18% Similarity=0.148 Sum_probs=232.6
Q ss_pred CCChh-HHHHHHHHHhhCCCcEEEEecCCCCCc-ccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 014316 16 GRSPR-MQYQALSLARQMSLEVDVVAYGGSKPH-AAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLW 93 (427)
Q Consensus 16 ~~~~r-~~~~a~~La~~~g~~V~vi~~~~~~~~-~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (427)
||.++ +.+.+..|+++ ||+|+|+|....... ......+|+++++++. .+...... ......+..+... +++
T Consensus 20 GG~e~~v~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~-~~~~~~~~~~~~~---~~~ 92 (405)
T TIGR03449 20 GGMNVYILETATELARR-GIEVDIFTRATRPSQPPVVEVAPGVRVRNVVA--GPYEGLDK-EDLPTQLCAFTGG---VLR 92 (405)
T ss_pred CCceehHHHHHHHHhhC-CCEEEEEecccCCCCCCccccCCCcEEEEecC--CCcccCCH-HHHHHHHHHHHHH---HHH
Confidence 44433 45667788885 999999997543211 1222245999999872 21211111 0111111111111 111
Q ss_pred HHHhh-hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcC-CCchHHHHHHHHHHHHhccCCEEE
Q 014316 94 FLCVK-IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLG-RRSHFVSIYRWIEKYYGKMANGCL 171 (427)
Q Consensus 94 ~~~~~-~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~-~~~~~~~~~~~~e~~~~~~ad~vi 171 (427)
..+.+ ..++|+||+|. ....++++++++..++|+|+++|+.. ........ ...+.....+++|+.+.+.+|.++
T Consensus 93 ~~~~~~~~~~Diih~h~---~~~~~~~~~~~~~~~~p~v~t~h~~~-~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi 168 (405)
T TIGR03449 93 AEARHEPGYYDLIHSHY---WLSGQVGWLLRDRWGVPLVHTAHTLA-AVKNAALADGDTPEPEARRIGEQQLVDNADRLI 168 (405)
T ss_pred HHhhccCCCCCeEEech---HHHHHHHHHHHHhcCCCEEEeccchH-HHHHHhccCCCCCchHHHHHHHHHHHHhcCeEE
Confidence 11221 24799999998 44455577778888999999999873 22111110 111222344567888889999999
Q ss_pred EcCHHHHHHHHHhhCCe---EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccc
Q 014316 172 CVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLA 247 (427)
Q Consensus 172 ~vS~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (427)
++|+...+.+.+.++.+ +.+|+|| +.+.|.+.+.. ....
T Consensus 169 ~~s~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~~~~---~~~~---------------------------------- 211 (405)
T TIGR03449 169 ANTDEEARDLVRHYDADPDRIDVVAPGADLERFRPGDRA---TERA---------------------------------- 211 (405)
T ss_pred ECCHHHHHHHHHHcCCChhhEEEECCCcCHHHcCCCcHH---HHHH----------------------------------
Confidence 99999998887776653 7899999 77777554211 1111
Q ss_pred ccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCC--EEEEEEeC-
Q 014316 248 GIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR--LLFIITGK- 324 (427)
Q Consensus 248 ~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~i~G~- 324 (427)
++..+.+ +.+|+|+||+.+.||++.|++|++.+.++ .|+ ++|+|+|+
T Consensus 212 --~~~~~~~-~~~i~~~G~l~~~K~~~~li~a~~~l~~~---------------------------~~~~~~~l~ivG~~ 261 (405)
T TIGR03449 212 --RLGLPLD-TKVVAFVGRIQPLKAPDVLLRAVAELLDR---------------------------DPDRNLRVIVVGGP 261 (405)
T ss_pred --hcCCCCC-CcEEEEecCCCcccCHHHHHHHHHHHHhh---------------------------CCCcceEEEEEeCC
Confidence 1123333 35899999999999999999999998765 555 99999995
Q ss_pred ---C-CChHHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcc
Q 014316 325 ---G-PDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI 399 (427)
Q Consensus 325 ---G-~~~~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~ 399 (427)
| +..++++++++++++. +|.|+|. ++.+++.++|+.||++++| |..|++|++++|||++|+|||+|+.||.
T Consensus 262 ~~~g~~~~~~l~~~~~~~~l~~~v~~~g~-~~~~~~~~~l~~ad~~v~p---s~~E~~g~~~lEAma~G~Pvi~~~~~~~ 337 (405)
T TIGR03449 262 SGSGLATPDALIELAAELGIADRVRFLPP-RPPEELVHVYRAADVVAVP---SYNESFGLVAMEAQACGTPVVAARVGGL 337 (405)
T ss_pred CCCcchHHHHHHHHHHHcCCCceEEECCC-CCHHHHHHHHHhCCEEEEC---CCCCCcChHHHHHHHcCCCEEEecCCCc
Confidence 3 4567888999999985 7999997 9999999999999999997 7779999999999999999999999999
Q ss_pred ccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 400 EELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 400 ~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
.|++.++.+|+++ +|.++++++|.++
T Consensus 338 ~e~i~~~~~g~~~~~~d~~~la~~i~~~ 365 (405)
T TIGR03449 338 PVAVADGETGLLVDGHDPADWADALARL 365 (405)
T ss_pred HhhhccCCceEECCCCCHHHHHHHHHHH
Confidence 9999999999999 4889999998875
No 9
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=100.00 E-value=3.5e-34 Score=289.71 Aligned_cols=337 Identities=18% Similarity=0.232 Sum_probs=228.1
Q ss_pred EEEEEeCCCCCChhH-HHHHHHHHhhCCCcEEEEecCCCCCcc-cccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHH
Q 014316 7 ACVVVLGDLGRSPRM-QYQALSLARQMSLEVDVVAYGGSKPHA-AILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKP 84 (427)
Q Consensus 7 ~~v~~~~~~~~~~r~-~~~a~~La~~~g~~V~vi~~~~~~~~~-~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (427)
+.+......||++++ ...|.+|+++ ||+|+|+|...+.... ......++.++....+. +...+.+ ...+...
T Consensus 4 l~~~~~~~~gG~e~~~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~----~~~~~~~ 77 (392)
T cd03805 4 AFIHPDLGIGGAERLVVDAALALQSR-GHEVTIYTSHHDPSHCFEETKDGTLPVRVRGDWL-PRSIFGR----FHILCAY 77 (392)
T ss_pred EEECCCCCCchHHHHHHHHHHHHHhC-CCeEEEEcCCCCchhcchhccCCeeEEEEEeEEE-cchhhHh----HHHHHHH
Confidence 334333356676665 6677888886 9999999975432111 11222235555554111 0111111 1111111
Q ss_pred HHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCC-chHHHHHHHHHHHH
Q 014316 85 LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRR-SHFVSIYRWIEKYY 163 (427)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~-~~~~~~~~~~e~~~ 163 (427)
+......++....+..++|+||+++ +.... .+.....+.|+++++|.... ......+.. ..+....+++|++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~Dvi~~~~---~~~~~--~~~~~~~~~~~i~~~h~~~~-~~~~~~~~~~~~~~~~~~~~e~~~ 151 (392)
T cd03805 78 LRMLYLALYLLLLPDEKYDVFIVDQ---VSACV--PLLKLFSPSKILFYCHFPDQ-LLAQRGSLLKRLYRKPFDWLEEFT 151 (392)
T ss_pred HHHHHHHHHHHhcccCCCCEEEEcC---cchHH--HHHHHhcCCcEEEEEecChH-HhcCCCcHHHHHHHHHHHHHHHHH
Confidence 2211111111123457999999987 32222 22333444899999994422 111100001 11233457889999
Q ss_pred hccCCEEEEcCHHHHHHHHHhhCCe----EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCc
Q 014316 164 GKMANGCLCVTQAMQHELAQNWGIK----ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA 238 (427)
Q Consensus 164 ~~~ad~vi~vS~~~~~~l~~~~~~~----~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (427)
++.+|.++++|+.+++.+.+.++.. ..+|+|+ +.+.|.+.......+
T Consensus 152 ~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~n~vd~~~~~~~~~~~~~~---------------------------- 203 (392)
T cd03805 152 TGMADKIVVNSNFTASVFKKTFPSLAKNPREVVYPCVDTDSFESTSEDPDPG---------------------------- 203 (392)
T ss_pred hhCceEEEEcChhHHHHHHHHhcccccCCcceeCCCcCHHHcCccccccccc----------------------------
Confidence 9999999999999999988766432 3489999 766665432110000
Q ss_pred cchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCC---C
Q 014316 239 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLY---P 315 (427)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 315 (427)
. ....++..+++++||+.+.||++.+++|++.+.++ . |
T Consensus 204 -----------~-~~~~~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~---------------------------~~~~~ 244 (392)
T cd03805 204 -----------L-LIPKSGKKTFLSINRFERKKNIALAIEAFAILKDK---------------------------LAEFK 244 (392)
T ss_pred -----------c-cccCCCceEEEEEeeecccCChHHHHHHHHHHHhh---------------------------ccccc
Confidence 0 11223345899999999999999999999999875 4 7
Q ss_pred CEEEEEEeCCCCh--------HHHHHHHHH-cCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHH
Q 014316 316 RLLFIITGKGPDK--------ESYEEKIRR-LRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMF 385 (427)
Q Consensus 316 ~~~l~i~G~G~~~--------~~~~~~~~~-l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEam 385 (427)
+++|+++|+|+.. +++++++++ ++++ +|.|+|. ++.+++..+|++||++++| |..|+||++++|||
T Consensus 245 ~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~-~~~~~~~~~l~~ad~~l~~---s~~E~~g~~~lEAm 320 (392)
T cd03805 245 NVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPS-ISDSQKELLLSSARALLYT---PSNEHFGIVPLEAM 320 (392)
T ss_pred CeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCC-CChHHHHHHHhhCeEEEEC---CCcCCCCchHHHHH
Confidence 8999999998753 678888888 8884 8999998 9999999999999999986 77799999999999
Q ss_pred cCCCcEEEeccCccccceecCCcEEEe-CChHHHHHHHHHhc
Q 014316 386 GCGLPVCAVSYSCIEELVKVDKNGLLF-SSSSELADQLLVNA 426 (427)
Q Consensus 386 a~G~PVIas~~~g~~e~v~~~~~G~l~-~~~~~la~~l~~~~ 426 (427)
|||+|||+|+.||..|++.++.+|+++ .|+++++++|.++.
T Consensus 321 a~G~PvI~s~~~~~~e~i~~~~~g~~~~~~~~~~a~~i~~l~ 362 (392)
T cd03805 321 YAGKPVIACNSGGPLETVVDGETGFLCEPTPEEFAEAMLKLA 362 (392)
T ss_pred HcCCCEEEECCCCcHHHhccCCceEEeCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999 67899999988653
No 10
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=100.00 E-value=1.8e-33 Score=287.90 Aligned_cols=242 Identities=19% Similarity=0.251 Sum_probs=189.6
Q ss_pred hhCCCcEEEEcCCCChhHHHHHHHHHh--hcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCH
Q 014316 98 KIASPDVFLVQNPPSVPTLVAVKWASS--LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQ 175 (427)
Q Consensus 98 ~~~~~Dvv~~~~p~~~~~~~~~~~~~~--~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~ 175 (427)
+..++|+||+|.. .....+.+++. ..+.|.++++|+.... .. .....++...+..++.+|.++++|+
T Consensus 115 ~~~~~diihaH~~---~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~-------~~-~~~~~~~~~~~~~~~~ad~vv~~S~ 183 (406)
T PRK15427 115 TPFVADVFIAHFG---PAGVTAAKLRELGVLRGKIATIFHGIDIS-------SR-EVLNHYTPEYQQLFRRGDLMLPISD 183 (406)
T ss_pred ccCCCCEEEEcCC---hHHHHHHHHHHhCCCCCCeEEEEcccccc-------cc-hhhhhhhHHHHHHHHhCCEEEECCH
Confidence 4468999999983 33333444444 2345778899986321 11 1111112233445678999999999
Q ss_pred HHHHHHHHhhCCe---EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccccc
Q 014316 176 AMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDV 251 (427)
Q Consensus 176 ~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (427)
..++.+.+ ++.+ +.++||| |.+.|.+..
T Consensus 184 ~~~~~l~~-~g~~~~ki~vi~nGvd~~~f~~~~----------------------------------------------- 215 (406)
T PRK15427 184 LWAGRLQK-MGCPPEKIAVSRMGVDMTRFSPRP----------------------------------------------- 215 (406)
T ss_pred HHHHHHHH-cCCCHHHEEEcCCCCCHHHcCCCc-----------------------------------------------
Confidence 99999876 4553 8899999 766664321
Q ss_pred ccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHH
Q 014316 252 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 331 (427)
Q Consensus 252 ~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~ 331 (427)
....+.++.|+|+||+.+.||++.+++|++.+.++ .++++|.|+|+|+..+++
T Consensus 216 ~~~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~---------------------------~~~~~l~ivG~G~~~~~l 268 (406)
T PRK15427 216 VKAPATPLEIISVARLTEKKGLHVAIEACRQLKEQ---------------------------GVAFRYRILGIGPWERRL 268 (406)
T ss_pred cccCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhh---------------------------CCCEEEEEEECchhHHHH
Confidence 00122356899999999999999999999999876 688999999999999999
Q ss_pred HHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCC---CCCCCchHHHHHHcCCCcEEEeccCccccceecCC
Q 014316 332 EEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSS---SGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDK 407 (427)
Q Consensus 332 ~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s---~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~ 407 (427)
++++++++++ +|.|+|. ++.+++.++|+.||++|+|+... ..||+|++++||||||+|||+|++||++|++.++.
T Consensus 269 ~~~~~~~~l~~~V~~~G~-~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~ 347 (406)
T PRK15427 269 RTLIEQYQLEDVVEMPGF-KPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADK 347 (406)
T ss_pred HHHHHHcCCCCeEEEeCC-CCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCC
Confidence 9999999995 7999996 99999999999999999984321 13999999999999999999999999999999999
Q ss_pred cEEEe--CChHHHHHHHHHhc
Q 014316 408 NGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 408 ~G~l~--~~~~~la~~l~~~~ 426 (427)
+|+++ +|++++|++|.++.
T Consensus 348 ~G~lv~~~d~~~la~ai~~l~ 368 (406)
T PRK15427 348 SGWLVPENDAQALAQRLAAFS 368 (406)
T ss_pred ceEEeCCCCHHHHHHHHHHHH
Confidence 99999 57899999998764
No 11
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=1.6e-33 Score=291.16 Aligned_cols=329 Identities=19% Similarity=0.111 Sum_probs=212.9
Q ss_pred HHHHHHHHHhhCCC--cEEEEecCCCC------C-cccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHH
Q 014316 21 MQYQALSLARQMSL--EVDVVAYGGSK------P-HAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFML 91 (427)
Q Consensus 21 ~~~~a~~La~~~g~--~V~vi~~~~~~------~-~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (427)
+...+..|+++ || +|+|+|..... . .......+|+++++++..+ ..... .......+..+...+.
T Consensus 32 v~~La~~L~~~-G~~~~V~v~t~~~~~~~~~~~~~~~~~~~~~gv~v~r~~~~~--~~~~~-~~~~~~~~~~~~~~l~-- 105 (439)
T TIGR02472 32 VLELARALARR-SEVEQVDLVTRLIKDAKVSPDYAQPIERIAPGARIVRLPFGP--RRYLR-KELLWPYLDELADNLL-- 105 (439)
T ss_pred HHHHHHHHHhC-CCCcEEEEEeccccCcCCCCccCCCeeEeCCCcEEEEecCCC--CCCcC-hhhhhhhHHHHHHHHH--
Confidence 34455667775 87 99999953211 0 1111224699999998322 11111 0011111111111111
Q ss_pred HHHHHhh-hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcC----CCchHHHH---HH--HHHH
Q 014316 92 LWFLCVK-IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLG----RRSHFVSI---YR--WIEK 161 (427)
Q Consensus 92 ~~~~~~~-~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~----~~~~~~~~---~~--~~e~ 161 (427)
. .+.+ ..+||+||+|+ ....+++.++++..++|+|+|.|+...... .... ....+.+. .. ..|+
T Consensus 106 -~-~~~~~~~~~DvIH~h~---~~~~~~~~~~~~~~~~p~V~t~H~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (439)
T TIGR02472 106 -Q-HLRQQGHLPDLIHAHY---ADAGYVGARLSRLLGVPLIFTGHSLGREKR-RRLLAAGLKPQQIEKQYNISRRIEAEE 179 (439)
T ss_pred -H-HHHHcCCCCCEEEEcc---hhHHHHHHHHHHHhCCCEEEecccccchhh-hhcccCCCChhhhhhhcchHHHHHHHH
Confidence 1 1122 23799999998 345555777888889999999998643211 0000 00111111 11 2477
Q ss_pred HHhccCCEEEEcCHHHHHHHHHhh-CC---eEEEecCC-CCCCcCCCChH-HHHHHHhhhhhcccCCCCccccccCCCCC
Q 014316 162 YYGKMANGCLCVTQAMQHELAQNW-GI---KATVLYDQ-PPEFFHPTSLE-EKHELFCRLNKILHQPLGVQDCVSNGMEG 235 (427)
Q Consensus 162 ~~~~~ad~vi~vS~~~~~~l~~~~-~~---~~~vi~n~-~~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (427)
..++.+|.++++|..........+ +. ++.+|||| |.+.|.+.... ...++...+
T Consensus 180 ~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~-------------------- 239 (439)
T TIGR02472 180 ETLAHASLVITSTHQEIEEQYALYDSYQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLL-------------------- 239 (439)
T ss_pred HHHHhCCEEEECCHHHHHHHHHhccCCCccceEEECCCcChhhcCCCCccccchhHHHHH--------------------
Confidence 888999999999976544332222 32 38899999 87777664311 111110000
Q ss_pred CCccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCC
Q 014316 236 QKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP 315 (427)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (427)
+.....+++ .+|+|+||+.+.||++.|++|++.+.+.. ..+
T Consensus 240 -------------~~~~~~~~~-~~i~~vGrl~~~Kg~~~li~A~~~l~~~~-------------------------~~~ 280 (439)
T TIGR02472 240 -------------APFLKDPEK-PPILAISRPDRRKNIPSLVEAYGRSPKLQ-------------------------EMA 280 (439)
T ss_pred -------------HhhccccCC-cEEEEEcCCcccCCHHHHHHHHHhChhhh-------------------------hhc
Confidence 001222333 48999999999999999999998754210 023
Q ss_pred CEEEEEEeCCCChHH-----------HHHHHHHcCCC-cEEEecCCCCcccHHHHHhcC----cEEEeeccCCCCCCCch
Q 014316 316 RLLFIITGKGPDKES-----------YEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSA----DLGVCLHTSSSGLDLPM 379 (427)
Q Consensus 316 ~~~l~i~G~G~~~~~-----------~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~a----di~v~p~~~s~~e~~p~ 379 (427)
++. +++|+|++.+. +.++++++++. +|+|+|. ++.++++++|+.| |++|+| |..|+||+
T Consensus 281 ~l~-li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~-~~~~~~~~~~~~a~~~~Dv~v~p---S~~E~fg~ 355 (439)
T TIGR02472 281 NLV-LVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKH-HRPDDVPELYRLAARSRGIFVNP---ALTEPFGL 355 (439)
T ss_pred cEE-EEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCC-CCHHHHHHHHHHHhhcCCEEecc---cccCCccc
Confidence 443 36788875432 34456778885 7999997 8999999999987 999997 77899999
Q ss_pred HHHHHHcCCCcEEEeccCccccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 380 KVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 380 ~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
+++||||||+|||+|+.||++|++.++.+|+++ +|+++||++|.++
T Consensus 356 ~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~l 403 (439)
T TIGR02472 356 TLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDA 403 (439)
T ss_pred HHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999 6899999999875
No 12
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=2.1e-33 Score=281.18 Aligned_cols=322 Identities=19% Similarity=0.246 Sum_probs=224.8
Q ss_pred eEEEEEeCCCCCChhH-HHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHH
Q 014316 6 RACVVVLGDLGRSPRM-QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKP 84 (427)
Q Consensus 6 ~~~v~~~~~~~~~~r~-~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (427)
+++++.....|+.+++ ...+..|+++ ||+|+|+|...+. ......+++.++.++. ............. ...+.
T Consensus 2 ki~~~~~p~~gG~~~~~~~la~~L~~~-G~~v~v~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~ 75 (371)
T cd04962 2 KIGIVCYPTYGGSGVVATELGKALARR-GHEVHFITSSRPF--RLDEYSPNIFFHEVEV--PQYPLFQYPPYDL-ALASK 75 (371)
T ss_pred ceeEEEEeCCCCccchHHHHHHHHHhc-CCceEEEecCCCc--chhhhccCeEEEEecc--cccchhhcchhHH-HHHHH
Confidence 4666667778877775 4566788886 9999999975432 1112234666654441 1000011000000 01111
Q ss_pred HHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhh---cCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHH
Q 014316 85 LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSL---RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEK 161 (427)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~---~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~ 161 (427)
+. .++ +..+||+||+|.+. +....+.+..+. .++|+|+++|+..+... +.. ..++++++
T Consensus 76 l~-------~~i-~~~~~divh~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~----~~~----~~~~~~~~ 137 (371)
T cd04962 76 IA-------EVA-KRYKLDLLHVHYAV--PHAVAAYLAREILGKKDLPVVTTLHGTDITLV----GQD----PSFQPATR 137 (371)
T ss_pred HH-------HHH-hcCCccEEeecccC--CccHHHHHHHHhcCcCCCcEEEEEcCCccccc----ccc----ccchHHHH
Confidence 11 111 33799999999732 222223333332 38999999997633111 111 12345667
Q ss_pred HHhccCCEEEEcCHHHHHHHHHhhCC--eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCc
Q 014316 162 YYGKMANGCLCVTQAMQHELAQNWGI--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA 238 (427)
Q Consensus 162 ~~~~~ad~vi~vS~~~~~~l~~~~~~--~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (427)
...+.+|.++++|+.+++.+.+.++. ++.+++|+ +...|.+.... ....
T Consensus 138 ~~~~~~d~ii~~s~~~~~~~~~~~~~~~~i~vi~n~~~~~~~~~~~~~---~~~~------------------------- 189 (371)
T cd04962 138 FSIEKSDGVTAVSESLRQETYELFDITKEIEVIPNFVDEDRFRPKPDE---ALKR------------------------- 189 (371)
T ss_pred HHHhhCCEEEEcCHHHHHHHHHhcCCcCCEEEecCCcCHhhcCCCchH---HHHH-------------------------
Confidence 77889999999999999988876543 38899999 65555433211 1000
Q ss_pred cchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEE
Q 014316 239 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL 318 (427)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (427)
+.+..++ ..+++++|++.+.||++.+++|+..+.++ ++++
T Consensus 190 -----------~~~~~~~-~~~il~~g~l~~~K~~~~li~a~~~l~~~----------------------------~~~~ 229 (371)
T cd04962 190 -----------RLGAPEG-EKVLIHISNFRPVKRIDDVIRIFAKVRKE----------------------------VPAR 229 (371)
T ss_pred -----------hcCCCCC-CeEEEEecccccccCHHHHHHHHHHHHhc----------------------------CCce
Confidence 1123333 35899999999999999999999998653 4589
Q ss_pred EEEEeCCCChHHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC
Q 014316 319 FIITGKGPDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 319 l~i~G~G~~~~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~ 397 (427)
|+++|+|++.+.+++.+++++++ +|.|.|. .+++.++|+.||++++| |..|++|++++|||+||+|||+|+.|
T Consensus 230 l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~~d~~v~p---s~~E~~~~~~~EAma~g~PvI~s~~~ 303 (371)
T cd04962 230 LLLVGDGPERSPAERLARELGLQDDVLFLGK---QDHVEELLSIADLFLLP---SEKESFGLAALEAMACGVPVVASNAG 303 (371)
T ss_pred EEEEcCCcCHHHHHHHHHHcCCCceEEEecC---cccHHHHHHhcCEEEeC---CCcCCCccHHHHHHHcCCCEEEeCCC
Confidence 99999999999999999999885 7999997 67899999999999997 67899999999999999999999999
Q ss_pred ccccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 398 CIEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 398 g~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
+..|++.++.+|+++ +|.++++++|.++
T Consensus 304 ~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l 333 (371)
T cd04962 304 GIPEVVKHGETGFLVDVGDVEAMAEYALSL 333 (371)
T ss_pred CchhhhcCCCceEEcCCCCHHHHHHHHHHH
Confidence 999999999999999 4789999998765
No 13
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=100.00 E-value=1.7e-32 Score=272.73 Aligned_cols=313 Identities=17% Similarity=0.153 Sum_probs=218.2
Q ss_pred CCCCChhH-HHHHHHHHhhCCCcEEEEecCCCC-CcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHH
Q 014316 14 DLGRSPRM-QYQALSLARQMSLEVDVVAYGGSK-PHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFML 91 (427)
Q Consensus 14 ~~~~~~r~-~~~a~~La~~~g~~V~vi~~~~~~-~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (427)
+.||.++. ...+.+|++ .||+|++++..... .........++++++++ .. .......+..+.+.+
T Consensus 10 ~~GG~~~~~~~l~~~L~~-~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~------ 76 (358)
T cd03812 10 NRGGIETFIMNYYRNLDR-SKIQFDFLVTSKEEGDYDDEIEKLGGKIYYIP--AR----KKNPLKYFKKLYKLI------ 76 (358)
T ss_pred CCccHHHHHHHHHHhcCc-cceEEEEEEeCCCCcchHHHHHHcCCeEEEec--CC----CccHHHHHHHHHHHH------
Confidence 34444443 334455665 49999999976543 12223344577777765 21 111222222222222
Q ss_pred HHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcE-EEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEE
Q 014316 92 LWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAF-IVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGC 170 (427)
Q Consensus 92 ~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~-i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~v 170 (427)
+..+||+||+|++. . ..+..+.++..+.|. +++.|+..+.. .........+++++++.+.+|.+
T Consensus 77 ------~~~~~Dvv~~~~~~--~-~~~~~~~~~~~~~~~~v~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 141 (358)
T cd03812 77 ------KKNKYDIVHVHGSS--A-SGFILLAAKKAGVKVRIAHSHNTSDSH------DKKKKILKYKVLRKLINRLATDY 141 (358)
T ss_pred ------hcCCCCEEEEeCcc--h-hHHHHHHHhhCCCCeEEEEeccccccc------cccchhhHHHHHHHHHHhcCCEE
Confidence 23899999999844 2 222344444456664 66788774311 11111111156677888899999
Q ss_pred EEcCHHHHHHHHHhh-CCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccc
Q 014316 171 LCVTQAMQHELAQNW-GIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAG 248 (427)
Q Consensus 171 i~vS~~~~~~l~~~~-~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (427)
+++|+...+.+.+.. ..++.+|||+ |...|.+.... +.. ..
T Consensus 142 i~~s~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~-~~~-~~----------------------------------- 184 (358)
T cd03812 142 LACSEEAGKWLFGKVKNKKFKVIPNGIDLEKFIFNEEI-RKK-RR----------------------------------- 184 (358)
T ss_pred EEcCHHHHHHHHhCCCcccEEEEeccCcHHHcCCCchh-hhH-HH-----------------------------------
Confidence 999999998886642 2348999999 66555443211 111 00
Q ss_pred cccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh
Q 014316 249 IDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 328 (427)
Q Consensus 249 ~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~ 328 (427)
.... .++...|+|+||+.+.||++.+++|++.+.+. .++++|+|+|+|+..
T Consensus 185 -~~~~-~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~---------------------------~~~~~l~ivG~g~~~ 235 (358)
T cd03812 185 -ELGI-LEDKFVIGHVGRFSEQKNHEFLIEIFAELLKK---------------------------NPNAKLLLVGDGELE 235 (358)
T ss_pred -HcCC-CCCCEEEEEEeccccccChHHHHHHHHHHHHh---------------------------CCCeEEEEEeCCchH
Confidence 0122 23446899999999999999999999999876 789999999999999
Q ss_pred HHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCC
Q 014316 329 ESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDK 407 (427)
Q Consensus 329 ~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~ 407 (427)
+.+++.+++++++ +|.|+|. .+++.++|+.||++|+| |..|++|++++||||+|+|||+|+.||.+|++.++.
T Consensus 236 ~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~adi~v~p---s~~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~~~ 309 (358)
T cd03812 236 EEIKKKVKELGLEDKVIFLGV---RNDVPELLQAMDVFLFP---SLYEGLPLVLIEAQASGLPCILSDTITKEVDLTDLV 309 (358)
T ss_pred HHHHHHHHhcCCCCcEEEecc---cCCHHHHHHhcCEEEec---ccccCCCHHHHHHHHhCCCEEEEcCCchhhhhccCc
Confidence 9999999999885 8999997 88999999999999997 777999999999999999999999999999998844
Q ss_pred cEEEe-CChHHHHHHHHHhc
Q 014316 408 NGLLF-SSSSELADQLLVNA 426 (427)
Q Consensus 408 ~G~l~-~~~~~la~~l~~~~ 426 (427)
.++.. ++++++|++|.++.
T Consensus 310 ~~~~~~~~~~~~a~~i~~l~ 329 (358)
T cd03812 310 KFLSLDESPEIWAEEILKLK 329 (358)
T ss_pred cEEeCCCCHHHHHHHHHHHH
Confidence 43333 44699999998864
No 14
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=100.00 E-value=2.5e-32 Score=278.12 Aligned_cols=327 Identities=17% Similarity=0.159 Sum_probs=217.8
Q ss_pred hHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhh
Q 014316 20 RMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKI 99 (427)
Q Consensus 20 r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (427)
.+...|.+|+++ ||+|+++|........ . |+++++++..+........+..............+.....+..+.
T Consensus 12 ~~~~la~~L~~~-G~~v~~~~~~~~~~~~---~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (396)
T cd03818 12 QFRHLAPALAAQ-GHEVVFLTEPNAAPPP---G--GVRVVRYRPPRGPTSGTHPYLREFEEAVLRGQAVARALLALRAKG 85 (396)
T ss_pred hHHHHHHHHHHC-CCEEEEEecCCCCCCC---C--CeeEEEecCCCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHhcC
Confidence 456788999997 9999999987654222 1 799999883211111111111111111111112222233333344
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhc--C---CCch----HHHHHHHHHHHHhccCCEE
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSL--G---RRSH----FVSIYRWIEKYYGKMANGC 170 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~--~---~~~~----~~~~~~~~e~~~~~~ad~v 170 (427)
.+||+||+|.-. ... ..+...+.++|+|...|-+ ++...... . ..+. ..+...++....++.+|.+
T Consensus 86 ~~pdvi~~h~~~--~~~--~~l~~~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v 160 (396)
T cd03818 86 FRPDVIVAHPGW--GET--LFLKDVWPDAPLIGYFEFY-YRAEGADVGFDPEFPPSLDDALRLRNRNALILLALAQADAG 160 (396)
T ss_pred CCCCEEEECCcc--chh--hhHHHhCCCCCEEEEEeee-ecCCCCCCCCCCCCCCchhHHHHHHHhhhHhHHHHHhCCEE
Confidence 689999999722 111 1122233578888766533 21111000 0 0111 0111122345677899999
Q ss_pred EEcCHHHHHHHHHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccc
Q 014316 171 LCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGI 249 (427)
Q Consensus 171 i~vS~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (427)
|++|+.+++.+.+.++.++.+|||| |.+.|.+..... ... +.
T Consensus 161 i~~s~~~~~~~~~~~~~ki~vI~ngvd~~~f~~~~~~~-~~~------------------------------------~~ 203 (396)
T cd03818 161 VSPTRWQRSTFPAELRSRISVIHDGIDTDRLRPDPQAR-LRL------------------------------------PN 203 (396)
T ss_pred ECCCHHHHhhCcHhhccceEEeCCCccccccCCCchhh-hcc------------------------------------cc
Confidence 9999999998877666679999999 877776653111 000 00
Q ss_pred ccccCCCCCeEEEEEee-cCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCC-
Q 014316 250 DVFLKPNRPALVVSSTS-WTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD- 327 (427)
Q Consensus 250 ~~~~~~~~~~~i~~~g~-~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~- 327 (427)
.....+++ .+|+|+|| +.+.||++.|++|++.+.+. .|+++|+|+|++..
T Consensus 204 ~~~~~~~~-~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~---------------------------~~~~~lvivG~~~~~ 255 (396)
T cd03818 204 GRVLTPGD-EVITFVARNLEPYRGFHVFMRALPRLLRA---------------------------RPDARVVIVGGDGVS 255 (396)
T ss_pred cccCCCCC-eEEEEECCCcccccCHHHHHHHHHHHHHH---------------------------CCCcEEEEEcCCCcc
Confidence 00122333 48999997 99999999999999999876 78999999997421
Q ss_pred -------hH-HHHHHHHHcC----CCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 328 -------KE-SYEEKIRRLR----LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 328 -------~~-~~~~~~~~l~----l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
.+ ..++++++++ .++|.|+|. ++.+++.++|+.||++++| |..|++|++++||||||+|||+|+
T Consensus 256 ~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~-v~~~~~~~~l~~adv~v~~---s~~e~~~~~llEAmA~G~PVIas~ 331 (396)
T cd03818 256 YGAPPPDGESWKQHMLDELGGRLDLSRVHFLGR-VPYDQYLALLQVSDVHVYL---TYPFVLSWSLLEAMACGCLVVGSD 331 (396)
T ss_pred cCCCCCCcccHHHHHHHHhhcccCcceEEEeCC-CCHHHHHHHHHhCcEEEEc---CcccccchHHHHHHHCCCCEEEcC
Confidence 11 2333444443 468999998 9999999999999999997 778999999999999999999999
Q ss_pred cCccccceecCCcEEEe--CChHHHHHHHHHhc
Q 014316 396 YSCIEELVKVDKNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 396 ~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~~ 426 (427)
.||.+|++.++.+|+++ +|++++|++|.++.
T Consensus 332 ~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll 364 (396)
T cd03818 332 TAPVREVITDGENGLLVDFFDPDALAAAVIELL 364 (396)
T ss_pred CCCchhhcccCCceEEcCCCCHHHHHHHHHHHH
Confidence 99999999999999999 57899999998763
No 15
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=2.1e-32 Score=293.42 Aligned_cols=247 Identities=19% Similarity=0.185 Sum_probs=184.7
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEE-EecccchhhhhhhcCCCchHHHHHHHHHHH-HhccCCEEEEcCHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIV-DWHNFGYTLLSLSLGRRSHFVSIYRWIEKY-YGKMANGCLCVTQA 176 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~-~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~~ad~vi~vS~~ 176 (427)
..+|||||+|+ ....+++.++++..++|+|+ ++|++.. .. ....+...+..+.+. ....++.++++|+.
T Consensus 398 ~~kpDIVH~h~---~~a~~lg~lAa~~~gvPvIv~t~h~~~~-~~-----~~~~~~~~~~~l~~~l~~~~~~i~Vs~S~~ 468 (694)
T PRK15179 398 SSVPSVVHIWQ---DGSIFACALAALLAGVPRIVLSVRTMPP-VD-----RPDRYRVEYDIIYSELLKMRGVALSSNSQF 468 (694)
T ss_pred HcCCcEEEEeC---CcHHHHHHHHHHHcCCCEEEEEeCCCcc-cc-----chhHHHHHHHHHHHHHHhcCCeEEEeCcHH
Confidence 47999999998 44455577888888999876 5676521 10 111122222222222 22234567777888
Q ss_pred HHHHHHHhhCCe---EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccc
Q 014316 177 MQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVF 252 (427)
Q Consensus 177 ~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (427)
.++.+.+.++.+ +.||||| |.+.|.+.+...... .++ . ..
T Consensus 469 ~~~~l~~~~g~~~~kI~VI~NGVd~~~f~~~~~~~~~~--~~~----------------------------~------~~ 512 (694)
T PRK15179 469 AAHRYADWLGVDERRIPVVYNGLAPLKSVQDDACTAMM--AQF----------------------------D------AR 512 (694)
T ss_pred HHHHHHHHcCCChhHEEEECCCcCHHhcCCCchhhHHH--Hhh----------------------------c------cc
Confidence 888887766764 8999999 766665432111100 000 0 01
Q ss_pred cCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHH
Q 014316 253 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 332 (427)
Q Consensus 253 ~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~ 332 (427)
. ++..++|+++||+.+.||++.|++|++.+.+. .|+++|+|+|+|+..+.++
T Consensus 513 ~-~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~---------------------------~p~~~LvIvG~G~~~~~L~ 564 (694)
T PRK15179 513 T-SDARFTVGTVMRVDDNKRPFLWVEAAQRFAAS---------------------------HPKVRFIMVGGGPLLESVR 564 (694)
T ss_pred c-CCCCeEEEEEEeCCccCCHHHHHHHHHHHHHH---------------------------CcCeEEEEEccCcchHHHH
Confidence 1 22345899999999999999999999998876 7899999999999999999
Q ss_pred HHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEE
Q 014316 333 EKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLL 411 (427)
Q Consensus 333 ~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l 411 (427)
+++++++++ +|.|+|. .+++..+|+.+|++|+| |..|+||++++||||||+|||+|++||.+|+|.++.+|++
T Consensus 565 ~l~~~lgL~~~V~flG~---~~dv~~ll~aaDv~Vlp---S~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlL 638 (694)
T PRK15179 565 EFAQRLGMGERILFTGL---SRRVGYWLTQFNAFLLL---SRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLT 638 (694)
T ss_pred HHHHHcCCCCcEEEcCC---cchHHHHHHhcCEEEec---cccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEE
Confidence 999999995 8999998 67899999999999997 7789999999999999999999999999999999999999
Q ss_pred eC--C--hHHHHHHHHH
Q 014316 412 FS--S--SSELADQLLV 424 (427)
Q Consensus 412 ~~--~--~~~la~~l~~ 424 (427)
++ | +++++++|.+
T Consensus 639 v~~~d~~~~~La~aL~~ 655 (694)
T PRK15179 639 LPADTVTAPDVAEALAR 655 (694)
T ss_pred eCCCCCChHHHHHHHHH
Confidence 93 4 3577777654
No 16
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=100.00 E-value=1e-32 Score=275.77 Aligned_cols=246 Identities=23% Similarity=0.245 Sum_probs=195.0
Q ss_pred hhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHH
Q 014316 98 KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (427)
Q Consensus 98 ~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (427)
+..+||+||+|... ....+..+++..++|+++++|+........ ...... .+.+..+++.+.+.+|.++++|+.+
T Consensus 79 ~~~~~dvvh~~~~~---~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 79 RRHRPDLVHAHFGF---DGVYALPLARRLGVPLVVTFHGFDATTSLA-LLLRSR-WALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred HhhCCCEEEeccCc---hHHHHHHHHHHcCCCEEEEEeCccccccch-hhcccc-hhHHHHHHHHHHHhcCEEEECCHHH
Confidence 34799999999732 233355567778999999999763211110 000011 3345667788889999999999999
Q ss_pred HHHHHHhhCCe---EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccccccc
Q 014316 178 QHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFL 253 (427)
Q Consensus 178 ~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (427)
++.+.+. +.+ +.+++|+ +.+.|.+..
T Consensus 154 ~~~~~~~-~~~~~~i~vi~~g~d~~~~~~~~------------------------------------------------- 183 (367)
T cd05844 154 RDRLLAL-GFPPEKVHVHPIGVDTAKFTPAT------------------------------------------------- 183 (367)
T ss_pred HHHHHHc-CCCHHHeEEecCCCCHHhcCCCC-------------------------------------------------
Confidence 9998764 443 8899998 655553321
Q ss_pred CCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHH
Q 014316 254 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (427)
Q Consensus 254 ~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~ 333 (427)
....+..++|+|++.+.||++.+++|++.+.++ .++++|+++|+|+..+++++
T Consensus 184 ~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~---------------------------~~~~~l~ivG~g~~~~~~~~ 236 (367)
T cd05844 184 PARRPPRILFVGRFVEKKGPLLLLEAFARLARR---------------------------VPEVRLVIIGDGPLLAALEA 236 (367)
T ss_pred CCCCCcEEEEEEeeccccChHHHHHHHHHHHHh---------------------------CCCeEEEEEeCchHHHHHHH
Confidence 111234899999999999999999999999876 78999999999998889999
Q ss_pred HHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCC---CCCCCchHHHHHHcCCCcEEEeccCccccceecCCcE
Q 014316 334 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSS---SGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNG 409 (427)
Q Consensus 334 ~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s---~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G 409 (427)
+++++++ ++|.|+|. ++.+++..+|+.||++++|...+ ..|++|++++||||||+|||+|+.++..|++.++.+|
T Consensus 237 ~~~~~~~~~~v~~~g~-~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g 315 (367)
T cd05844 237 LARALGLGGRVTFLGA-QPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETG 315 (367)
T ss_pred HHHHcCCCCeEEECCC-CCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCee
Confidence 9999888 48999998 99999999999999999973322 2499999999999999999999999999999999999
Q ss_pred EEe--CChHHHHHHHHHhc
Q 014316 410 LLF--SSSSELADQLLVNA 426 (427)
Q Consensus 410 ~l~--~~~~~la~~l~~~~ 426 (427)
+++ +|+++++++|.++.
T Consensus 316 ~~~~~~d~~~l~~~i~~l~ 334 (367)
T cd05844 316 LLVPEGDVAALAAALGRLL 334 (367)
T ss_pred EEECCCCHHHHHHHHHHHH
Confidence 999 47899999998764
No 17
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=4.4e-32 Score=269.43 Aligned_cols=306 Identities=21% Similarity=0.243 Sum_probs=218.1
Q ss_pred CCCCChhH-HHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHH
Q 014316 14 DLGRSPRM-QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLL 92 (427)
Q Consensus 14 ~~~~~~r~-~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (427)
+.||.+++ ...+..|+++ ||+|++++.... ........+++++.++ ..... ..........+.+.+
T Consensus 8 ~~gG~e~~~~~l~~~L~~~-g~~v~v~~~~~~--~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~l~~~~------- 74 (355)
T cd03819 8 ESGGVERGTLELARALVER-GHRSLVASAGGR--LVAELEAEGSRHIKLP--FISKN-PLRILLNVARLRRLI------- 74 (355)
T ss_pred ccCcHHHHHHHHHHHHHHc-CCEEEEEcCCCc--hHHHHHhcCCeEEEcc--ccccc-hhhhHHHHHHHHHHH-------
Confidence 34555554 4456777775 999999986543 2233444588888777 22111 111111111111111
Q ss_pred HHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEE
Q 014316 93 WFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLC 172 (427)
Q Consensus 93 ~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~ 172 (427)
+..+||+||+|++. ..+.+.++++..++|+++++|+. +.... ..+.+.+.+|.+++
T Consensus 75 -----~~~~~dii~~~~~~---~~~~~~~~~~~~~~~~i~~~h~~-~~~~~---------------~~~~~~~~~~~vi~ 130 (355)
T cd03819 75 -----REEKVDIVHARSRA---PAWSAYLAARRTRPPFVTTVHGF-YSVNF---------------RYNAIMARGDRVIA 130 (355)
T ss_pred -----HHcCCCEEEECCCc---hhHHHHHHHHhcCCCEEEEeCCc-hhhHH---------------HHHHHHHhcCEEEE
Confidence 23799999999832 23335566677799999999998 31110 22334567999999
Q ss_pred cCHHHHHHHHHhhCCe---EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccc
Q 014316 173 VTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAG 248 (427)
Q Consensus 173 vS~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (427)
+|+.+++.+.+.++.+ +.+|+|| +.+.|.+......... . .+
T Consensus 131 ~s~~~~~~~~~~~~~~~~k~~~i~ngi~~~~~~~~~~~~~~~~--~--------------------------------~~ 176 (355)
T cd03819 131 VSNFIADHIRENYGVDPDRIRVIPRGVDLDRFDPGAVPPERIL--A--------------------------------LA 176 (355)
T ss_pred eCHHHHHHHHHhcCCChhhEEEecCCccccccCccccchHHHH--H--------------------------------HH
Confidence 9999999998777653 8899999 7666654321111000 0 00
Q ss_pred cccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh
Q 014316 249 IDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 328 (427)
Q Consensus 249 ~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~ 328 (427)
++... +++..+++|+||+.+.||++.+++|+..+.+. .++++++++|+|+..
T Consensus 177 ~~~~~-~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~---------------------------~~~~~l~ivG~~~~~ 228 (355)
T cd03819 177 REWPL-PKGKPVILLPGRLTRWKGQEVFIEALARLKKD---------------------------DPDVHLLIVGDAQGR 228 (355)
T ss_pred HHcCC-CCCceEEEEeeccccccCHHHHHHHHHHHHhc---------------------------CCCeEEEEEECCccc
Confidence 11122 23345899999999999999999999999875 678999999998765
Q ss_pred HHH----HHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCC-CCCCCchHHHHHHcCCCcEEEeccCccccc
Q 014316 329 ESY----EEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-SGLDLPMKVVDMFGCGLPVCAVSYSCIEEL 402 (427)
Q Consensus 329 ~~~----~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s-~~e~~p~~~lEama~G~PVIas~~~g~~e~ 402 (427)
+.+ .+.++++++. +|.|+|. .+++.++|++||++++| | ..|++|++++||||||+|||+++.|+..|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~l~~ad~~i~p---s~~~e~~~~~l~EA~a~G~PvI~~~~~~~~e~ 302 (355)
T cd03819 229 RFYYAELLELIKRLGLQDRVTFVGH---CSDMPAAYALADIVVSA---STEPEAFGRTAVEAQAMGRPVIASDHGGARET 302 (355)
T ss_pred chHHHHHHHHHHHcCCcceEEEcCC---cccHHHHHHhCCEEEec---CCCCCCCchHHHHHHhcCCCEEEcCCCCcHHH
Confidence 443 4566777874 7999997 88999999999999997 6 569999999999999999999999999999
Q ss_pred eecCCcEEEe--CChHHHHHHHHH
Q 014316 403 VKVDKNGLLF--SSSSELADQLLV 424 (427)
Q Consensus 403 v~~~~~G~l~--~~~~~la~~l~~ 424 (427)
+.++.+|+++ +|.++++++|..
T Consensus 303 i~~~~~g~~~~~~~~~~l~~~i~~ 326 (355)
T cd03819 303 VRPGETGLLVPPGDAEALAQALDQ 326 (355)
T ss_pred HhCCCceEEeCCCCHHHHHHHHHH
Confidence 9999999998 678999999853
No 18
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=100.00 E-value=6.4e-32 Score=272.36 Aligned_cols=329 Identities=20% Similarity=0.197 Sum_probs=228.8
Q ss_pred CCCh-hHHHHHHHHHhhCCCcEEEEecCCCCCccc-ccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 014316 16 GRSP-RMQYQALSLARQMSLEVDVVAYGGSKPHAA-ILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLW 93 (427)
Q Consensus 16 ~~~~-r~~~~a~~La~~~g~~V~vi~~~~~~~~~~-~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (427)
||.+ .+...+..|++. ||+|+|+|......... .....++.+++++. .+.....+. .....+...... +.
T Consensus 21 GG~~~~~~~l~~~L~~~-g~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~----~~ 92 (398)
T cd03800 21 GGQNVYVLELARALARL-GHEVDIFTRRIDDALPPIVELAPGVRVVRVPA--GPAEYLPKE-ELWPYLDEFADD----LL 92 (398)
T ss_pred CceeehHHHHHHHHhcc-CceEEEEEecCCcccCCccccccceEEEeccc--ccccCCChh-hcchhHHHHHHH----HH
Confidence 4444 346677888885 99999999654432221 23456899998873 211111110 001111111111 11
Q ss_pred HHHhhh-CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcC-CCchHHHHHHHHHHHHhccCCEEE
Q 014316 94 FLCVKI-ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLG-RRSHFVSIYRWIEKYYGKMANGCL 171 (427)
Q Consensus 94 ~~~~~~-~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~-~~~~~~~~~~~~e~~~~~~ad~vi 171 (427)
..+.+. .+||+||+|. ....+.+..+++..++|+|++.|+... ....... ............|+.+.+.+|.++
T Consensus 93 ~~~~~~~~~~Div~~~~---~~~~~~~~~~~~~~~~~~i~~~h~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii 168 (398)
T cd03800 93 RFLRREGGRPDLIHAHY---WDSGLVALLLARRLGIPLVHTFHSLGA-VKRRHLGAADTYEPARRIEAEERLLRAADRVI 168 (398)
T ss_pred HHHHhcCCCccEEEEec---CccchHHHHHHhhcCCceEEEeecccc-cCCcccccccccchhhhhhHHHHHHhhCCEEE
Confidence 112221 2899999997 333344667777889999999998742 1110000 111012233466788889999999
Q ss_pred EcCHHHHHHHHHhhCCe---EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccc
Q 014316 172 CVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLA 247 (427)
Q Consensus 172 ~vS~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (427)
++|+..++.+.+.++.+ +.+|+|+ +.+.|.+...... . .
T Consensus 169 ~~s~~~~~~~~~~~~~~~~~~~vi~ng~~~~~~~~~~~~~~-~-~----------------------------------- 211 (398)
T cd03800 169 ASTPQEAEELYSLYGAYPRRIRVVPPGVDLERFTPYGRAEA-R-R----------------------------------- 211 (398)
T ss_pred EcCHHHHHHHHHHccccccccEEECCCCCccceecccchhh-H-H-----------------------------------
Confidence 99999999888766443 7899999 7666654321110 0 0
Q ss_pred ccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCC
Q 014316 248 GIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD 327 (427)
Q Consensus 248 ~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~ 327 (427)
.......+ ..+|+|+||+.+.||++.+++|+..+.++ .++++|+++|+|+.
T Consensus 212 -~~~~~~~~-~~~i~~~gr~~~~k~~~~ll~a~~~l~~~---------------------------~~~~~l~i~G~~~~ 262 (398)
T cd03800 212 -ARLLRDPD-KPRILAVGRLDPRKGIDTLIRAYAELPEL---------------------------RERANLVIVGGPRD 262 (398)
T ss_pred -HhhccCCC-CcEEEEEcccccccCHHHHHHHHHHHHHh---------------------------CCCeEEEEEECCCC
Confidence 00122233 35899999999999999999999999876 67899999998864
Q ss_pred h------HHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccc
Q 014316 328 K------ESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIE 400 (427)
Q Consensus 328 ~------~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~ 400 (427)
. ..++++++++++. +|.|+|. ++.+++..+++.||++++| |..|++|++++||||||+|||+++.+|..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~adi~l~p---s~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~ 338 (398)
T cd03800 263 DILAMDEEELRELARELGVIDRVDFPGR-VSREDLPALYRAADVFVNP---ALYEPFGLTALEAMACGLPVVATAVGGPR 338 (398)
T ss_pred cchhhhhHHHHHHHHhcCCCceEEEecc-CCHHHHHHHHHhCCEEEec---ccccccCcHHHHHHhcCCCEEECCCCCHH
Confidence 3 3356677888884 8999997 9999999999999999997 77799999999999999999999999999
Q ss_pred cceecCCcEEEe--CChHHHHHHHHHhc
Q 014316 401 ELVKVDKNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 401 e~v~~~~~G~l~--~~~~~la~~l~~~~ 426 (427)
|++.++.+|+++ +|+++++++|.++.
T Consensus 339 e~i~~~~~g~~~~~~~~~~l~~~i~~l~ 366 (398)
T cd03800 339 DIVVDGVTGLLVDPRDPEALAAALRRLL 366 (398)
T ss_pred HHccCCCCeEEeCCCCHHHHHHHHHHHH
Confidence 999999999999 47899999998763
No 19
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=5.4e-32 Score=281.78 Aligned_cols=269 Identities=15% Similarity=0.103 Sum_probs=184.8
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhh-----cCCcEEEEecccchhhhh-----hhcCCC-chH--HH--HH--HHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSL-----RRSAFIVDWHNFGYTLLS-----LSLGRR-SHF--VS--IY--RWIEKY 162 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~-----~~~p~i~~~h~~~~~~~~-----~~~~~~-~~~--~~--~~--~~~e~~ 162 (427)
.+|||||+|. +.+.+++.+++.. .++|+|+|+|+..+.-.. ...+-. ..+ .. .+ ..+.+.
T Consensus 117 ~~pDiiH~h~---w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (466)
T PRK00654 117 PRPDIVHAHD---WHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKA 193 (466)
T ss_pred CCCceEEECC---cHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHH
Confidence 5899999998 5555556556543 379999999998652100 000000 000 00 00 123455
Q ss_pred HhccCCEEEEcCHHHHHHHHHh-h-----------CCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccc
Q 014316 163 YGKMANGCLCVTQAMQHELAQN-W-----------GIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCV 229 (427)
Q Consensus 163 ~~~~ad~vi~vS~~~~~~l~~~-~-----------~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (427)
..+.||.+++||+.+++++... + ..++.+|+|| |.+.|.|.....-...|..-
T Consensus 194 ~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~-------------- 259 (466)
T PRK00654 194 GLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSAD-------------- 259 (466)
T ss_pred HHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEecCCCCccccCCccCcccccccChh--------------
Confidence 6788999999999999888642 2 1248899999 88878764211000000000
Q ss_pred cCCCCCCCccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCC
Q 014316 230 SNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDG 309 (427)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (427)
..+ .+. . -+...+++++++.++..+|+++||+.++||++.|++|++.+.+.
T Consensus 260 --~~~-~k~--~-~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~----------------------- 310 (466)
T PRK00654 260 --DLE-GKA--E-NKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ----------------------- 310 (466)
T ss_pred --hhh-chH--H-HHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc-----------------------
Confidence 000 000 0 00012223344443344899999999999999999999998642
Q ss_pred cccCCCCEEEEEEeCCCC--hHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcC
Q 014316 310 KQYLYPRLLFIITGKGPD--KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGC 387 (427)
Q Consensus 310 ~~~~~~~~~l~i~G~G~~--~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~ 387 (427)
+++|+|+|+|+. .+.+++++++++. ++.+... .+.+.+..+|++||++|+| |..|+||++++|||+|
T Consensus 311 ------~~~lvivG~g~~~~~~~l~~l~~~~~~-~v~~~~g-~~~~~~~~~~~~aDv~v~P---S~~E~~gl~~lEAma~ 379 (466)
T PRK00654 311 ------GGQLVLLGTGDPELEEAFRALAARYPG-KVGVQIG-YDEALAHRIYAGADMFLMP---SRFEPCGLTQLYALRY 379 (466)
T ss_pred ------CCEEEEEecCcHHHHHHHHHHHHHCCC-cEEEEEe-CCHHHHHHHHhhCCEEEeC---CCCCCchHHHHHHHHC
Confidence 689999999863 4678888888763 5665444 3556678999999999998 8899999999999999
Q ss_pred CCcEEEeccCccccceecC------CcEEEe--CChHHHHHHHHHh
Q 014316 388 GLPVCAVSYSCIEELVKVD------KNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 388 G~PVIas~~~g~~e~v~~~------~~G~l~--~~~~~la~~l~~~ 425 (427)
|+|+|+|++||++|+|.++ .+|+++ +|+++|+++|.++
T Consensus 380 G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~ 425 (466)
T PRK00654 380 GTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRA 425 (466)
T ss_pred CCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHH
Confidence 9999999999999999988 899999 5789999998764
No 20
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=6.4e-32 Score=272.77 Aligned_cols=306 Identities=20% Similarity=0.272 Sum_probs=212.8
Q ss_pred HHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhhCCCc
Q 014316 24 QALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPD 103 (427)
Q Consensus 24 ~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 103 (427)
.+..|.+ .++|+|++..... ....++++++++ ... ........+... . ..+....+..++|
T Consensus 25 l~~~l~~--~~~v~v~~~~~~~-----~~~~~~~~~~~~--~~~--~~~~~~~~~~~~----~----~~~~~~~~~~~~d 85 (388)
T TIGR02149 25 LTRELAR--LMDVDVRCFGDQR-----FDSEGLTVKGYR--PWS--ELKEANKALGTF----S----VDLAMANDPVDAD 85 (388)
T ss_pred HHHHHHH--hcCeeEEcCCCch-----hcCCCeEEEEec--Chh--hccchhhhhhhh----h----HHHHHhhCCCCCC
Confidence 3445544 3789999876433 234588888887 211 111111111111 0 0111122335799
Q ss_pred EEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHHHHHH
Q 014316 104 VFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQ 183 (427)
Q Consensus 104 vv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~ 183 (427)
+||+|+ ....+.+.+++++.++|+|+++|+... ..............+..++++...+.+|.++++|+.+++.+.+
T Consensus 86 ivh~~~---~~~~~~~~~~~~~~~~p~v~~~h~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~ 161 (388)
T TIGR02149 86 VVHSHT---WYTFLAGHLAKKLYDKPLVVTAHSLEP-LRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILK 161 (388)
T ss_pred eEeecc---hhhhhHHHHHHHhcCCCEEEEeecccc-cccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHH
Confidence 999998 333344666777789999999998731 1100000001112356788999999999999999999999887
Q ss_pred hh-CC---eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCC
Q 014316 184 NW-GI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRP 258 (427)
Q Consensus 184 ~~-~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (427)
.+ +. ++.+|+|| +.+.|.+... .....+ ++.+.+.
T Consensus 162 ~~~~~~~~~i~vi~ng~~~~~~~~~~~---~~~~~~------------------------------------~~~~~~~- 201 (388)
T TIGR02149 162 YYPDLDPEKVHVIYNGIDTKEYKPDDG---NVVLDR------------------------------------YGIDRSR- 201 (388)
T ss_pred HcCCCCcceEEEecCCCChhhcCCCch---HHHHHH------------------------------------hCCCCCc-
Confidence 66 33 38899999 6666654321 111111 1333333
Q ss_pred eEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChH----HHHHH
Q 014316 259 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKE----SYEEK 334 (427)
Q Consensus 259 ~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~----~~~~~ 334 (427)
..|+|+||+.+.||++.|++|++.+. ++++++++|+|++.+ .+++.
T Consensus 202 ~~i~~~Grl~~~Kg~~~li~a~~~l~------------------------------~~~~l~i~g~g~~~~~~~~~~~~~ 251 (388)
T TIGR02149 202 PYILFVGRITRQKGVPHLLDAVHYIP------------------------------KDVQVVLCAGAPDTPEVAEEVRQA 251 (388)
T ss_pred eEEEEEcccccccCHHHHHHHHHHHh------------------------------hcCcEEEEeCCCCcHHHHHHHHHH
Confidence 48999999999999999999999874 257889998877644 34555
Q ss_pred HHHcCC--CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe
Q 014316 335 IRRLRL--KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF 412 (427)
Q Consensus 335 ~~~l~l--~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~ 412 (427)
+++++. ++|.|.+++++.+++.++|++||++|+| |..|++|++++|||+||+|||+|+.||.+|++.++.+|+++
T Consensus 252 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~aDv~v~p---s~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~ 328 (388)
T TIGR02149 252 VALLDRNRTGIIWINKMLPKEELVELLSNAEVFVCP---SIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLV 328 (388)
T ss_pred HHHhccccCceEEecCCCCHHHHHHHHHhCCEEEeC---CccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEc
Confidence 566655 3588876669999999999999999997 77899999999999999999999999999999999999999
Q ss_pred --CCh------HHHHHHHHHh
Q 014316 413 --SSS------SELADQLLVN 425 (427)
Q Consensus 413 --~~~------~~la~~l~~~ 425 (427)
++. ++++++|.++
T Consensus 329 ~~~~~~~~~~~~~l~~~i~~l 349 (388)
T TIGR02149 329 PPDNSDADGFQAELAKAINIL 349 (388)
T ss_pred CCCCCcccchHHHHHHHHHHH
Confidence 455 7899998765
No 21
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=100.00 E-value=1.3e-31 Score=271.90 Aligned_cols=320 Identities=14% Similarity=0.128 Sum_probs=219.1
Q ss_pred ceEEEEEeCCCC----CChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHH
Q 014316 5 GRACVVVLGDLG----RSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLL 80 (427)
Q Consensus 5 ~~~~v~~~~~~~----~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~ 80 (427)
.++.+++...+. ..++++.+...+++..-++|+++|.............+|+.+++++........+.++.. + .
T Consensus 3 ~~~~~~~~~~~~~p~~~~g~ve~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~ 80 (380)
T PRK15484 3 DKIIFTVTPIFSIPPRGAAAVETWIYQVAKRTSIPNRIACIKNPGYPEYTKVNDNCDIHYIGFSRIYKRLFQKWTR-L-D 80 (380)
T ss_pred ceEEEEeccCCCCCCccccHHHHHHHHhhhhccCCeeEEEecCCCCCchhhccCCCceEEEEeccccchhhhhhhc-c-C
Confidence 345555554443 355778887888766557999999776542222245567888888610100000011000 0 0
Q ss_pred HHHHHHHHHHHHHHH-HhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHH
Q 014316 81 LLKPLIQFFMLLWFL-CVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWI 159 (427)
Q Consensus 81 ~~~~~~~~~~~~~~~-~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~ 159 (427)
...+... ++..+ ..+..++|+||+|+ ..... ..+..+..+.|+++++|+. +..
T Consensus 81 ~~~~~~~---~~~~~~~~~~~~~~vi~v~~---~~~~~-~~~~~~~~~~~~v~~~h~~-~~~------------------ 134 (380)
T PRK15484 81 PLPYSQR---ILNIAHKFTITKDSVIVIHN---SMKLY-RQIRERAPQAKLVMHMHNA-FEP------------------ 134 (380)
T ss_pred chhHHHH---HHHHHHhcCCCCCcEEEEeC---cHHhH-HHHHhhCCCCCEEEEEecc-cCh------------------
Confidence 1111111 11111 11225699999999 33222 4455666788999999987 310
Q ss_pred HHHHhccCCEEEEcCHHHHHHHHHhhCC-eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCC
Q 014316 160 EKYYGKMANGCLCVTQAMQHELAQNWGI-KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQK 237 (427)
Q Consensus 160 e~~~~~~ad~vi~vS~~~~~~l~~~~~~-~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (427)
...+.++.++++|+.+++.+.+.++. ++.+|||| |.+.|.+.... ++..+
T Consensus 135 --~~~~~~~~ii~~S~~~~~~~~~~~~~~~i~vIpngvd~~~~~~~~~~---~~~~~----------------------- 186 (380)
T PRK15484 135 --ELLDKNAKIIVPSQFLKKFYEERLPNADISIVPNGFCLETYQSNPQP---NLRQQ----------------------- 186 (380)
T ss_pred --hHhccCCEEEEcCHHHHHHHHhhCCCCCEEEecCCCCHHHcCCcchH---HHHHH-----------------------
Confidence 11235799999999999988776543 48899999 76666543211 11111
Q ss_pred ccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCE
Q 014316 238 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRL 317 (427)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (427)
.+...+ ..+|+|+||+.+.||++.|++|++.+.++ .|++
T Consensus 187 -------------~~~~~~-~~~il~~Grl~~~Kg~~~Li~A~~~l~~~---------------------------~p~~ 225 (380)
T PRK15484 187 -------------LNISPD-ETVLLYAGRISPDKGILLLMQAFEKLATA---------------------------HSNL 225 (380)
T ss_pred -------------hCCCCC-CeEEEEeccCccccCHHHHHHHHHHHHHh---------------------------CCCe
Confidence 122233 35899999999999999999999999876 7899
Q ss_pred EEEEEeCCCCh-----H----HHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCC-CCCCchHHHHHHcC
Q 014316 318 LFIITGKGPDK-----E----SYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-GLDLPMKVVDMFGC 387 (427)
Q Consensus 318 ~l~i~G~G~~~-----~----~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~-~e~~p~~~lEama~ 387 (427)
+|+|+|+|+.. + .+++++++++ .+|.|+|. ++.+++.++|++||++|+| |. .|+||++++|||||
T Consensus 226 ~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~-~~v~~~G~-~~~~~l~~~~~~aDv~v~p---S~~~E~f~~~~lEAma~ 300 (380)
T PRK15484 226 KLVVVGDPTASSKGEKAAYQKKVLEAAKRIG-DRCIMLGG-QPPEKMHNYYPLADLVVVP---SQVEEAFCMVAVEAMAA 300 (380)
T ss_pred EEEEEeCCccccccchhHHHHHHHHHHHhcC-CcEEEeCC-CCHHHHHHHHHhCCEEEeC---CCCccccccHHHHHHHc
Confidence 99999998642 2 3444555555 47999998 8999999999999999997 65 49999999999999
Q ss_pred CCcEEEeccCccccceecCCcEEEe---CChHHHHHHHHHhc
Q 014316 388 GLPVCAVSYSCIEELVKVDKNGLLF---SSSSELADQLLVNA 426 (427)
Q Consensus 388 G~PVIas~~~g~~e~v~~~~~G~l~---~~~~~la~~l~~~~ 426 (427)
|+|||+|+.||.+|++.++.+|+++ .|++++|++|.++.
T Consensus 301 G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll 342 (380)
T PRK15484 301 GKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTL 342 (380)
T ss_pred CCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999954 57899999998753
No 22
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=1.4e-31 Score=292.61 Aligned_cols=348 Identities=17% Similarity=0.125 Sum_probs=229.0
Q ss_pred HHHHHHHHhhCC--CcEEEEecCCCCCc---------------------ccccCCCceEEEEeecCCCCC-CCCcchhhH
Q 014316 22 QYQALSLARQMS--LEVDVVAYGGSKPH---------------------AAILEHPSIHIHTMTQWPTIP-RGLPKVLKP 77 (427)
Q Consensus 22 ~~~a~~La~~~g--~~V~vi~~~~~~~~---------------------~~~~~~~~i~v~~~~~~~~~~-~~~~~~~~~ 77 (427)
..+|.+|++. | |+|+|+|-..+.+. .+....+|+.++++| ..+. ..+.+.. .
T Consensus 202 ~ELAraLa~~-~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~~~~~~~~~~~~~g~rIvRip--~GP~~~~l~Ke~-L 277 (1050)
T TIGR02468 202 VELARALGSM-PGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRSSENDGDEMGESSGAYIIRIP--FGPRDKYIPKEE-L 277 (1050)
T ss_pred HHHHHHHHhC-CCCCEEEEEeCCcCccccccccCCccccccccccccccccccCCCCeEEEEec--cCCCCCCcCHHH-H
Confidence 4466777775 7 79999996543211 011234599999999 4443 2333321 1
Q ss_pred HHHHHHHHHHHHHHHHH----HHhh-----hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhh--hc
Q 014316 78 VLLLLKPLIQFFMLLWF----LCVK-----IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSL--SL 146 (427)
Q Consensus 78 ~~~~~~~~~~~~~~~~~----~~~~-----~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~--~~ 146 (427)
..++-.+...+...+.. +..+ ...||+||+|. ..+..++..++...++|+|+|.|.++-.-... ..
T Consensus 278 ~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHy---w~sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~ 354 (1050)
T TIGR02468 278 WPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHY---ADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQ 354 (1050)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECc---chHHHHHHHHHHhhCCCEEEECccchhhhhhhhccc
Confidence 11122222221111110 1111 11499999998 77777788999999999999999875211110 00
Q ss_pred CC------CchHH-HHHHHHHHHHhccCCEEEEcCHHHHHHHHHhhC----------------------C---eEEEecC
Q 014316 147 GR------RSHFV-SIYRWIEKYYGKMANGCLCVTQAMQHELAQNWG----------------------I---KATVLYD 194 (427)
Q Consensus 147 ~~------~~~~~-~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~----------------------~---~~~vi~n 194 (427)
+. ...+. ......|+.+.+.||.||++|+..++++...|+ . ++.||||
T Consensus 355 g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPp 434 (1050)
T TIGR02468 355 GRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPP 434 (1050)
T ss_pred ccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCC
Confidence 10 00011 112246888999999999999999987655542 1 5799999
Q ss_pred C-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCeEEEEEeecCCCCCH
Q 014316 195 Q-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDF 273 (427)
Q Consensus 195 ~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~ 273 (427)
| |.+.|.|...+...+. ++.. + .........+.. ++. ....++++ +|+++||+.+.||+
T Consensus 435 GVD~~~F~P~~~~~~~~~---~~~~-----------~---~~~~~~~~~~~~-l~r-~~~~pdkp-vIL~VGRL~p~KGi 494 (1050)
T TIGR02468 435 GMEFSHIVPHDGDMDGET---EGNE-----------E---HPAKPDPPIWSE-IMR-FFTNPRKP-MILALARPDPKKNI 494 (1050)
T ss_pred CCcHHHccCCCccccchh---cccc-----------c---ccccccchhhHH-HHh-hcccCCCc-EEEEEcCCccccCH
Confidence 9 8888887532111000 0000 0 000000000000 000 02234444 89999999999999
Q ss_pred HHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh-----------HHHHHHHHHcCCC-
Q 014316 274 GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-----------ESYEEKIRRLRLK- 341 (427)
Q Consensus 274 ~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~-----------~~~~~~~~~l~l~- 341 (427)
+.||+|+..+.+. ...+++. +|+|+|++. .+++++++++++.
T Consensus 495 ~~LIeAf~~L~~l-------------------------~~~~nL~-LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g 548 (1050)
T TIGR02468 495 TTLVKAFGECRPL-------------------------RELANLT-LIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYG 548 (1050)
T ss_pred HHHHHHHHHhHhh-------------------------ccCCCEE-EEEecCchhhhhhccchHHHHHHHHHHHHhCCCC
Confidence 9999999998753 0134666 466877643 3467788899995
Q ss_pred cEEEecCCCCcccHHHHHhcC----cEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe--CCh
Q 014316 342 RVAFRTMWLSAEDYPLLLGSA----DLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSS 415 (427)
Q Consensus 342 ~V~f~g~~~~~~~~~~~l~~a----di~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~--~~~ 415 (427)
+|.|+|. ++.++++++|+.| |++|+| |..|+||++++||||||+|||+|++||+.|++.++.+|+++ .|+
T Consensus 549 ~V~FlG~-v~~edvp~lYr~Ad~s~DVFV~P---S~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nGlLVdP~D~ 624 (1050)
T TIGR02468 549 QVAYPKH-HKQSDVPDIYRLAAKTKGVFINP---AFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHDQ 624 (1050)
T ss_pred eEEecCC-CCHHHHHHHHHHhhhcCCeeeCC---cccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcEEEECCCCH
Confidence 7999997 9999999999988 699997 88899999999999999999999999999999999999999 578
Q ss_pred HHHHHHHHHhc
Q 014316 416 SELADQLLVNA 426 (427)
Q Consensus 416 ~~la~~l~~~~ 426 (427)
++||++|.++.
T Consensus 625 eaLA~AL~~LL 635 (1050)
T TIGR02468 625 QAIADALLKLV 635 (1050)
T ss_pred HHHHHHHHHHh
Confidence 99999998763
No 23
>PLN02846 digalactosyldiacylglycerol synthase
Probab=100.00 E-value=3.6e-31 Score=271.68 Aligned_cols=329 Identities=12% Similarity=0.066 Sum_probs=215.7
Q ss_pred CCCcceEEEEEeCCCCCChh----HHHHHHHHHhhCC-CcEEEEecCCCCCcc------------------cccCCCceE
Q 014316 1 MGRRGRACVVVLGDLGRSPR----MQYQALSLARQMS-LEVDVVAYGGSKPHA------------------AILEHPSIH 57 (427)
Q Consensus 1 ~~~~~~~~v~~~~~~~~~~r----~~~~a~~La~~~g-~~V~vi~~~~~~~~~------------------~~~~~~~i~ 57 (427)
|.++++|.|++.+..-...| ....+..|+++ | |+|+|+++......+ ...+..+-+
T Consensus 1 ~~~~mrIaivTdt~lP~vnGva~s~~~~a~~L~~~-G~heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e~~~~~~~~~~ 79 (462)
T PLN02846 1 MQKKQHIAIFTTASLPWMTGTAVNPLFRAAYLAKD-GDREVTLVIPWLSLKDQKLVYPNKITFSSPSEQEAYVRQWLEER 79 (462)
T ss_pred CCCCCEEEEEEcCCCCCCCCeeccHHHHHHHHHhc-CCcEEEEEecCCccccccccccccccccCchhhhhhhhhhccCe
Confidence 56778899988766654444 35567788886 9 799999975431100 001111345
Q ss_pred EEEeecCCCCCCCC-----cchhhHHHHHHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEE
Q 014316 58 IHTMTQWPTIPRGL-----PKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIV 132 (427)
Q Consensus 58 v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~ 132 (427)
+.+++..+.+...- .+.......+.+.+. ..+||+||+++|..+...-.+...++..++ +|.
T Consensus 80 v~r~~s~~~p~yp~r~~~~~r~~~~~~~i~~~l~------------~~~pDVIHv~tP~~LG~~~~g~~~~~k~~~-vV~ 146 (462)
T PLN02846 80 ISFLPKFSIKFYPGKFSTDKRSILPVGDISETIP------------DEEADIAVLEEPEHLTWYHHGKRWKTKFRL-VIG 146 (462)
T ss_pred EEEecccccccCcccccccccccCChHHHHHHHH------------hcCCCEEEEcCchhhhhHHHHHHHHhcCCc-EEE
Confidence 56666432211000 011111122223332 289999999997654332113334444444 777
Q ss_pred EecccchhhhhhhcCCCchHHHHHHHHHHHHhc-cCCEEEEcCHHHHHHHHHhhCCeEEEecCC-CCCCcCCCChHHHHH
Q 014316 133 DWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGK-MANGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHE 210 (427)
Q Consensus 133 ~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~-~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~ 210 (427)
++|.- |..+....+.......+.+.+.+++.+ ++|.+++.|..+++ +.+. ..+..+| |.++|.+.....+ +
T Consensus 147 tyHT~-y~~Y~~~~~~g~~~~~l~~~~~~~~~r~~~d~vi~pS~~~~~-l~~~----~i~~v~GVd~~~f~~~~~~~~-~ 219 (462)
T PLN02846 147 IVHTN-YLEYVKREKNGRVKAFLLKYINSWVVDIYCHKVIRLSAATQD-YPRS----IICNVHGVNPKFLEIGKLKLE-Q 219 (462)
T ss_pred EECCC-hHHHHHHhccchHHHHHHHHHHHHHHHHhcCEEEccCHHHHH-HhhC----EEecCceechhhcCCCcccHh-h
Confidence 89975 422211111101112223334444433 38999999997766 4332 2333477 7777765431110 1
Q ss_pred HHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCC-CeEEEEEeecCCCCCHHHHHHHHHhhHHHHhh
Q 014316 211 LFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNR-PALVVSSTSWTPDEDFGILLEAALMYDRRVAA 289 (427)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~ 289 (427)
. ....+. ...++|+||+.++||++.|++|++.+.+.
T Consensus 220 ~----------------------------------------~~~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~--- 256 (462)
T PLN02846 220 Q----------------------------------------KNGEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKE--- 256 (462)
T ss_pred h----------------------------------------cCCCCCcceEEEEEecCcccCCHHHHHHHHHHHHhh---
Confidence 0 011111 12689999999999999999999998875
Q ss_pred hhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeec
Q 014316 290 ILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLH 369 (427)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~ 369 (427)
.|+++|+|+|+||+++++++++++++++...|.|. ++..+++..+|++|+|
T Consensus 257 ------------------------~~~~~l~ivGdGp~~~~L~~~a~~l~l~~~vf~G~----~~~~~~~~~~DvFv~p- 307 (462)
T PLN02846 257 ------------------------LSGLEVDLYGSGEDSDEVKAAAEKLELDVRVYPGR----DHADPLFHDYKVFLNP- 307 (462)
T ss_pred ------------------------CCCeEEEEECCCccHHHHHHHHHhcCCcEEEECCC----CCHHHHHHhCCEEEEC-
Confidence 68899999999999999999999999864346664 3444799999999997
Q ss_pred cCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEeCChHHHHHHHHHh
Q 014316 370 TSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLVN 425 (427)
Q Consensus 370 ~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~~~~~~la~~l~~~ 425 (427)
|..|+||++++||||||+|||+++.++ .+++.++.+|++++|.+++++++.++
T Consensus 308 --S~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~~~~~~a~ai~~~ 360 (462)
T PLN02846 308 --STTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYDDGKGFVRATLKA 360 (462)
T ss_pred --CCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecCCHHHHHHHHHHH
Confidence 888999999999999999999999998 59999999999999999999998875
No 24
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=3.8e-31 Score=263.18 Aligned_cols=303 Identities=15% Similarity=0.137 Sum_probs=210.9
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhhCC
Q 014316 22 QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIAS 101 (427)
Q Consensus 22 ~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (427)
...+..|.++ ||+|+|+|........ .....|+++++++. ......... ...+. . ++....+..+
T Consensus 22 ~~la~~L~~~-g~~v~v~~~~~~~~~~-~~~~~~i~~~~~~~--~~~~~~~~~---~~~~~-~-------~~~~~~~~~~ 86 (363)
T cd04955 22 EELAPRLVAR-GHEVTVYCRSPYPKQK-ETEYNGVRLIHIPA--PEIGGLGTI---IYDIL-A-------ILHALFVKRD 86 (363)
T ss_pred HHHHHHHHhc-CCCEEEEEccCCCCCc-ccccCCceEEEcCC--CCccchhhh---HHHHH-H-------HHHHHhccCC
Confidence 4455667765 9999999976543221 33456999999883 211111111 11110 1 1111112356
Q ss_pred CcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHHHH
Q 014316 102 PDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181 (427)
Q Consensus 102 ~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l 181 (427)
+|++|...|.. .. +....+..+.|++++.|+..+.. ........++.++.+++..+.+|.++++|+.+++.+
T Consensus 87 ~~~i~~~~~~~---~~-~~~~~~~~~~~~v~~~h~~~~~~----~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~ 158 (363)
T cd04955 87 IDHVHALGPAI---AP-FLPLLRLKGKKVVVNMDGLEWKR----AKWGRPAKRYLKFGEKLAVKFADRLIADSPGIKEYL 158 (363)
T ss_pred eEEEEecCccH---HH-HHHHHHhcCCCEEEEccCcceee----cccccchhHHHHHHHHHHHhhccEEEeCCHHHHHHH
Confidence 66666655322 22 23334445899999999875421 111223355677888999999999999999999999
Q ss_pred HHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCeE
Q 014316 182 AQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPAL 260 (427)
Q Consensus 182 ~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (427)
.+.++.+..+|||| +...+.+ +.+.+.. ....+ +. .
T Consensus 159 ~~~~~~~~~~i~ngv~~~~~~~-----~~~~~~~------------------------------------~~~~~-~~-~ 195 (363)
T cd04955 159 KEKYGRDSTYIPYGADHVVSSE-----EDEILKK------------------------------------YGLEP-GR-Y 195 (363)
T ss_pred HHhcCCCCeeeCCCcChhhcch-----hhhhHHh------------------------------------cCCCC-Cc-E
Confidence 88888777899999 5544432 0011000 11222 23 6
Q ss_pred EEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHHH-HcC
Q 014316 261 VVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIR-RLR 339 (427)
Q Consensus 261 i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~~-~l~ 339 (427)
++|+||+.+.||++.+++|++++. ++++|+++|+|+..+.+.+.++ .++
T Consensus 196 i~~~G~~~~~Kg~~~li~a~~~l~------------------------------~~~~l~ivG~~~~~~~~~~~~~~~~~ 245 (363)
T cd04955 196 YLLVGRIVPENNIDDLIEAFSKSN------------------------------SGKKLVIVGNADHNTPYGKLLKEKAA 245 (363)
T ss_pred EEEEecccccCCHHHHHHHHHhhc------------------------------cCceEEEEcCCCCcchHHHHHHHHhC
Confidence 789999999999999999998863 2689999999977767766666 566
Q ss_pred C-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCC-CCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEeCChHH
Q 014316 340 L-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG-LDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSE 417 (427)
Q Consensus 340 l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~-e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~~~~~~ 417 (427)
. ++|+|+|. ++.+++.+++.+||++++| |.. |++|++++||||||+|||+|++|+..|++.+ +|+++.+.+.
T Consensus 246 ~~~~V~~~g~-~~~~~~~~~~~~ad~~v~p---s~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~ 319 (363)
T cd04955 246 ADPRIIFVGP-IYDQELLELLRYAALFYLH---GHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD 319 (363)
T ss_pred CCCcEEEccc-cChHHHHHHHHhCCEEEeC---CccCCCCChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH
Confidence 6 48999997 9999999999999999997 666 9999999999999999999999999999965 7888865555
Q ss_pred HHHHHHHhc
Q 014316 418 LADQLLVNA 426 (427)
Q Consensus 418 la~~l~~~~ 426 (427)
++++|.++.
T Consensus 320 l~~~i~~l~ 328 (363)
T cd04955 320 LASLLEELE 328 (363)
T ss_pred HHHHHHHHH
Confidence 888887653
No 25
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=100.00 E-value=3.6e-31 Score=272.04 Aligned_cols=331 Identities=15% Similarity=0.128 Sum_probs=221.0
Q ss_pred CCCCCChhHHHHH-HHHHhh-CCCcEEEEecCCCCCc----------ccccCCCceEEEEee-c-CCCCCCCCcchhhHH
Q 014316 13 GDLGRSPRMQYQA-LSLARQ-MSLEVDVVAYGGSKPH----------AAILEHPSIHIHTMT-Q-WPTIPRGLPKVLKPV 78 (427)
Q Consensus 13 ~~~~~~~r~~~~a-~~La~~-~g~~V~vi~~~~~~~~----------~~~~~~~~i~v~~~~-~-~~~~~~~~~~~~~~~ 78 (427)
+..||++|+.-.| .+|.+. .+|+|+|.|...+..+ -++...++++++++. . ...+...+.++....
T Consensus 11 ~~ggg~ervl~~a~~~l~~~~~~~~v~i~t~~~~~~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 90 (419)
T cd03806 11 NAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDATPEEILEKVESRFNIELDRPRIVFFLLKYRKLVEASTYPRFTLLG 90 (419)
T ss_pred CCCCCchHHHHHHHHHHHHhCCCcEEEEECCCCCCCHHHHHHHHHHhcCeecCCCceEEEEecceeeeccccCCceeeHH
Confidence 3334888887665 455553 3789999997654422 111223467755552 1 111122223322222
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchh-hhh--hhcC--------
Q 014316 79 LLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYT-LLS--LSLG-------- 147 (427)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~-~~~--~~~~-------- 147 (427)
..+...+.. +.. +. ..+|||++.+.+..... . ++..+.++|+|+.+|-...+ .+. .+.+
T Consensus 91 ~~~~~~~~~----~~~-~~-~~~pDv~i~~~g~~~~~-~---~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~ 160 (419)
T cd03806 91 QALGSMILG----LEA-LL-KLVPDIFIDTMGYPFTY-P---LVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSA 160 (419)
T ss_pred HHHHHHHHH----HHH-HH-hcCCCEEEEcCCcccHH-H---HHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCcc
Confidence 222111111 111 11 25799998886332221 2 22233488999999922000 111 1111
Q ss_pred ---CCc---hH----HHHHHHHHHHHhccCCEEEEcCHHHHHHHHHhhCC--eEEEecCC-CCCCcCCCChHHHHHHHhh
Q 014316 148 ---RRS---HF----VSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGI--KATVLYDQ-PPEFFHPTSLEEKHELFCR 214 (427)
Q Consensus 148 ---~~~---~~----~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~--~~~vi~n~-~~~~f~~~~~~~~~~~~~~ 214 (427)
+.+ .. ++.+.+++++..+.||.++++|+.+++.+.+.++. ++.+|||+ +.+.|.+...
T Consensus 161 ~~~~~~~~~~~k~~y~~~~~~~~~~~~~~aD~ii~~S~~~~~~~~~~~~~~~~~~vi~~gvd~~~~~~~~~--------- 231 (419)
T cd03806 161 TIARSPVLSKAKLLYYRLFAFLYGLAGSFADVVMVNSTWTRNHIRSLWKRNTKPSIVYPPCDVEELLKLPL--------- 231 (419)
T ss_pred chhccchHHHHHHHHHHHHHHHHHHHhhcCCEEEECCHHHHHHHHHHhCcCCCcEEEcCCCCHHHhccccc---------
Confidence 111 11 23344688999999999999999999999887766 58899998 5444432210
Q ss_pred hhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccC
Q 014316 215 LNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNED 294 (427)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~ 294 (427)
....+...|+|+||+.++||++.+++|++.+.+....
T Consensus 232 --------------------------------------~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~----- 268 (419)
T cd03806 232 --------------------------------------DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPE----- 268 (419)
T ss_pred --------------------------------------ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcc-----
Confidence 0011234899999999999999999999999875000
Q ss_pred CCchhhhhhhhhcCCcccCCCCEEEEEEeCCCC------hHHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEe
Q 014316 295 DSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD------KESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVC 367 (427)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~------~~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~ 367 (427)
...++++|+|+|+|.. .+++++++++++++ +|+|+|. ++.+++..+|+.||+++.
T Consensus 269 -----------------~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g~-v~~~~l~~~l~~adv~v~ 330 (419)
T cd03806 269 -----------------EIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVVN-APFEELLEELSTASIGLH 330 (419)
T ss_pred -----------------cccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEecC-CCHHHHHHHHHhCeEEEE
Confidence 0013599999998742 35677889999995 8999997 999999999999999998
Q ss_pred eccCCCCCCCchHHHHHHcCCCcEEEeccCcc-cccee---cCCcEEEeCChHHHHHHHHHhc
Q 014316 368 LHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI-EELVK---VDKNGLLFSSSSELADQLLVNA 426 (427)
Q Consensus 368 p~~~s~~e~~p~~~lEama~G~PVIas~~~g~-~e~v~---~~~~G~l~~~~~~la~~l~~~~ 426 (427)
| +..|+||++++||||||+|||+++.||. .|++. ++.+|++++|++++|++|.++.
T Consensus 331 ~---s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~d~~~la~ai~~ll 390 (419)
T cd03806 331 T---MWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLASTAEEYAEAIEKIL 390 (419)
T ss_pred C---CccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeCCHHHHHHHHHHHH
Confidence 6 7779999999999999999999998774 57887 8999999999999999998764
No 26
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=100.00 E-value=9.5e-31 Score=258.81 Aligned_cols=333 Identities=24% Similarity=0.337 Sum_probs=234.7
Q ss_pred CCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccc------cCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHH
Q 014316 16 GRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAI------LEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFF 89 (427)
Q Consensus 16 ~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~------~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (427)
|...++...+.+|+++ ||+|++++.......... ....++++++++.... .. ......+.........
T Consensus 15 G~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~-- 88 (394)
T cd03794 15 GGAFRTTELAEELVKR-GHEVTVITGSPNYPSGKIYKGYKREEVDGVRVHRVPLPPY--KK-NGLLKRLLNYLSFALS-- 88 (394)
T ss_pred CcceeHHHHHHHHHhC-CceEEEEecCCCcccccccccceEEecCCeEEEEEecCCC--Cc-cchHHHHHhhhHHHHH--
Confidence 3444567778888886 999999997654332222 2345899998883221 11 1111111111111211
Q ss_pred HHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhh-c-CCCchHHHHHHHHHHHHhccC
Q 014316 90 MLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLS-L-GRRSHFVSIYRWIEKYYGKMA 167 (427)
Q Consensus 90 ~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~-~-~~~~~~~~~~~~~e~~~~~~a 167 (427)
....+..+..+||+||++++. ......+...++..++|+++++|+......... . .......+..+++++...+.+
T Consensus 89 -~~~~~~~~~~~~D~v~~~~~~-~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (394)
T cd03794 89 -ALLALLKRRRRPDVIIATSPP-LLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRA 166 (394)
T ss_pred -HHHHHHhcccCCCEEEEcCCh-HHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcC
Confidence 112222145899999999843 333343566666679999999999732211111 1 112222366788899999999
Q ss_pred CEEEEcCHHHHHHHHHhhCC---eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhh
Q 014316 168 NGCLCVTQAMQHELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIF 243 (427)
Q Consensus 168 d~vi~vS~~~~~~l~~~~~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (427)
|.++++|+.+++.+. .++. ++.+++|+ +...+.+...... +.
T Consensus 167 d~vi~~s~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~------------------------------ 212 (394)
T cd03794 167 DAIVVISPGMREYLV-RRGVPPEKISVIPNGVDLELFKPPPADES---LR------------------------------ 212 (394)
T ss_pred CEEEEECHHHHHHHH-hcCCCcCceEEcCCCCCHHHcCCccchhh---hh------------------------------
Confidence 999999999999887 3333 38899998 5444433321100 00
Q ss_pred hcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEe
Q 014316 244 TSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG 323 (427)
Q Consensus 244 ~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G 323 (427)
. .....++..++++|++.+.||++.+++|+..+.+ .++++|+++|
T Consensus 213 ------~-~~~~~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~----------------------------~~~~~l~i~G 257 (394)
T cd03794 213 ------K-ELGLDDKFVVLYAGNIGRAQGLDTLLEAAALLKD----------------------------RPDIRFLIVG 257 (394)
T ss_pred ------h-ccCCCCcEEEEEecCcccccCHHHHHHHHHHHhh----------------------------cCCeEEEEeC
Confidence 0 1123345689999999999999999999998865 2679999999
Q ss_pred CCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCC--CCCCchHHHHHHcCCCcEEEeccCcccc
Q 014316 324 KGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS--GLDLPMKVVDMFGCGLPVCAVSYSCIEE 401 (427)
Q Consensus 324 ~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~--~e~~p~~~lEama~G~PVIas~~~g~~e 401 (427)
+|+..+.+++.+...++++|.|+|. ++.+++.++|+.||++++|..... +.++|++++|||+||+|||+++.++..+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~ 336 (394)
T cd03794 258 DGPEKEELKELAKALGLDNVTFLGR-VPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAE 336 (394)
T ss_pred CcccHHHHHHHHHHcCCCcEEEeCC-CChHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchh
Confidence 9999888888888888889999995 999999999999999999844332 4667999999999999999999999999
Q ss_pred ceecCCcEEEe--CChHHHHHHHHHhc
Q 014316 402 LVKVDKNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 402 ~v~~~~~G~l~--~~~~~la~~l~~~~ 426 (427)
++.++.+|+++ +|.++++++|.++.
T Consensus 337 ~~~~~~~g~~~~~~~~~~l~~~i~~~~ 363 (394)
T cd03794 337 LVEEAGAGLVVPPGDPEALAAAILELL 363 (394)
T ss_pred hhccCCcceEeCCCCHHHHHHHHHHHH
Confidence 99999999999 47899999998764
No 27
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=100.00 E-value=7.6e-31 Score=258.91 Aligned_cols=253 Identities=21% Similarity=0.324 Sum_probs=196.4
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcC-CCchHHHHHH-HHHHHHhccCCEEEEcCHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLG-RRSHFVSIYR-WIEKYYGKMANGCLCVTQA 176 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~-~~~~~~~~~~-~~e~~~~~~ad~vi~vS~~ 176 (427)
..+||+||++++. .....+..+++..++|+++++|+. +........ .......... ++++.+.+.+|.++++|+.
T Consensus 82 ~~~~Div~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~ 158 (374)
T cd03817 82 ELGPDIVHTHTPF--SLGLLGLRVARKLGIPVVATYHTM-YEDYTHYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSEK 158 (374)
T ss_pred hcCCCEEEECCch--hhhhHHHHHHHHcCCCEEEEecCC-HHHHHHHHhcccchhHHHHHHHHHHHHhhhCCEEEeccHH
Confidence 4799999999863 223335666777899999999988 432211111 1112222233 6788888999999999999
Q ss_pred HHHHHHHhhCCe--EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccccccc
Q 014316 177 MQHELAQNWGIK--ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFL 253 (427)
Q Consensus 177 ~~~~l~~~~~~~--~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (427)
+++.+.+. +.+ +.+++|+ +...+.+...... +.. ...
T Consensus 159 ~~~~~~~~-~~~~~~~vi~~~~~~~~~~~~~~~~~---~~~------------------------------------~~~ 198 (374)
T cd03817 159 IADLLREY-GVKRPIEVIPTGIDLDRFEPVDGDDE---RRK------------------------------------LGI 198 (374)
T ss_pred HHHHHHhc-CCCCceEEcCCccchhccCccchhHH---HHh------------------------------------cCC
Confidence 99888664 433 7899999 6666654431111 000 112
Q ss_pred CCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHH
Q 014316 254 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (427)
Q Consensus 254 ~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~ 333 (427)
.+++..|+++|++.+.||++.++++++.+.++ .++++|+++|+|+..+.+++
T Consensus 199 -~~~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~---------------------------~~~~~l~i~G~~~~~~~~~~ 250 (374)
T cd03817 199 -PEDEPVLLYVGRLAKEKNIDFLIRAFARLLKE---------------------------EPDVKLVIVGDGPEREELEE 250 (374)
T ss_pred -CCCCeEEEEEeeeecccCHHHHHHHHHHHHHh---------------------------CCCeEEEEEeCCchHHHHHH
Confidence 23346899999999999999999999998875 67899999999999999999
Q ss_pred HHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe
Q 014316 334 KIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF 412 (427)
Q Consensus 334 ~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~ 412 (427)
.++++++. +|.|+|. ++.+++..+|+.||++++| +..|++|++++|||+||+|||+++.|+..|++.++.+|+++
T Consensus 251 ~~~~~~~~~~v~~~g~-~~~~~~~~~~~~ad~~l~~---s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~ 326 (374)
T cd03817 251 LARELGLADRVIFTGF-VPREELPDYYKAADLFVFA---STTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLF 326 (374)
T ss_pred HHHHcCCCCcEEEecc-CChHHHHHHHHHcCEEEec---ccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEe
Confidence 99988885 8999997 9999999999999999997 66789999999999999999999999999999999999999
Q ss_pred CCh-HHHHHHHHHhc
Q 014316 413 SSS-SELADQLLVNA 426 (427)
Q Consensus 413 ~~~-~~la~~l~~~~ 426 (427)
++. .+++++|.++.
T Consensus 327 ~~~~~~~~~~i~~l~ 341 (374)
T cd03817 327 PPGDEALAEALLRLL 341 (374)
T ss_pred CCCCHHHHHHHHHHH
Confidence 443 38888887653
No 28
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=7.3e-31 Score=260.26 Aligned_cols=310 Identities=17% Similarity=0.187 Sum_probs=221.0
Q ss_pred CCCChhHH-HHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 014316 15 LGRSPRMQ-YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLW 93 (427)
Q Consensus 15 ~~~~~r~~-~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (427)
.|+.+.+. ..+.+|.++ ||+|+|++........ .....++++++++.... . .......... ..
T Consensus 13 ~gG~~~~~~~l~~~L~~~-g~~v~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~-~~--------- 76 (357)
T cd03795 13 RGGIEQVIRDLAEGLAAR-GIEVAVLCASPEPKGR-DEERNGHRVIRAPSLLN--V--ASTPFSPSFF-KQ--------- 76 (357)
T ss_pred CCcHHHHHHHHHHHHHhC-CCceEEEecCCCCcch-hhhccCceEEEeecccc--c--ccccccHHHH-HH---------
Confidence 44545443 345677775 9999999976544222 22334667777763211 0 0000000000 00
Q ss_pred HHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEc
Q 014316 94 FLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCV 173 (427)
Q Consensus 94 ~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~v 173 (427)
+..+..++|+||+|.+....... .+. ...++|+++++|+..+ ....+...++++++.+.+.+|.++++
T Consensus 77 -~~~~~~~~Dii~~~~~~~~~~~~--~~~-~~~~~~~i~~~h~~~~--------~~~~~~~~~~~~~~~~~~~~d~vi~~ 144 (357)
T cd03795 77 -LKKLAKKADVIHLHFPNPLADLA--LLL-LPRKKPVVVHWHSDIV--------KQKLLLKLYRPLQRRFLRRADAIVAT 144 (357)
T ss_pred -HHhcCCCCCEEEEecCcchHHHH--HHH-hccCceEEEEEcChhh--------ccchhhhhhhHHHHHHHHhcCEEEeC
Confidence 00134799999999855433222 222 2268899999997633 22234556678888889999999999
Q ss_pred CHHHHHHHHHhhC--CeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccc
Q 014316 174 TQAMQHELAQNWG--IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGID 250 (427)
Q Consensus 174 S~~~~~~l~~~~~--~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (427)
|+.+.+.+...+. .++.++||+ +...+.+........
T Consensus 145 s~~~~~~~~~~~~~~~~~~~i~~gi~~~~~~~~~~~~~~~---------------------------------------- 184 (357)
T cd03795 145 SPNYAETSPVLRRFRDKVRVIPLGLDPARYPRPDALEEAI---------------------------------------- 184 (357)
T ss_pred cHHHHHHHHHhcCCccceEEecCCCChhhcCCcchhhhHh----------------------------------------
Confidence 9999987765443 348899999 655554432110000
Q ss_pred cccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHH
Q 014316 251 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 330 (427)
Q Consensus 251 ~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~ 330 (427)
.....+...|+|+|++.+.||++.+++|++++. +++|+++|+|+..+.
T Consensus 185 -~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~-------------------------------~~~l~i~G~g~~~~~ 232 (357)
T cd03795 185 -WRRAAGRPFFLFVGRLVYYKGLDVLLEAAAALP-------------------------------DAPLVIVGEGPLEAE 232 (357)
T ss_pred -hcCCCCCcEEEEecccccccCHHHHHHHHHhcc-------------------------------CcEEEEEeCChhHHH
Confidence 112233458999999999999999999999852 699999999999999
Q ss_pred HHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceec-CCc
Q 014316 331 YEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV-DKN 408 (427)
Q Consensus 331 ~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~-~~~ 408 (427)
+++.+++++.. +|.|+|. ++.+++.+++++||++++|. .+..|++|++++|||+||+|||+|+.++..+.+.+ +.+
T Consensus 233 ~~~~~~~~~~~~~V~~~g~-v~~~~~~~~~~~ad~~i~ps-~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~ 310 (357)
T cd03795 233 LEALAAALGLLDRVRFLGR-LDDEEKAALLAACDVFVFPS-VERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVT 310 (357)
T ss_pred HHHHHHhcCCcceEEEcCC-CCHHHHHHHHHhCCEEEeCC-cccccccchHHHHHHHcCCCEEecCCCCchhHHhhCCCc
Confidence 99999888884 8999997 99999999999999999972 12359999999999999999999999999998886 899
Q ss_pred EEEe--CChHHHHHHHHHhc
Q 014316 409 GLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 409 G~l~--~~~~~la~~l~~~~ 426 (427)
|+++ +|+++++++|.++.
T Consensus 311 g~~~~~~d~~~~~~~i~~l~ 330 (357)
T cd03795 311 GLVVPPGDPAALAEAIRRLL 330 (357)
T ss_pred eEEeCCCCHHHHHHHHHHHH
Confidence 9999 57899999998763
No 29
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=100.00 E-value=1.1e-30 Score=255.38 Aligned_cols=315 Identities=21% Similarity=0.216 Sum_probs=223.0
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHH
Q 014316 7 ACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLI 86 (427)
Q Consensus 7 ~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (427)
++++.....|....+...+..|.++ ||+|++++....... .....+++++.++....... ..........+.+.
T Consensus 2 Il~i~~~~~g~~~~~~~l~~~L~~~-g~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-- 75 (359)
T cd03808 2 ILHIVTVDGGLYSFRLPLIKALRAA-GYEVHVVAPPGDELE--ELEALGVKVIPIPLDRRGIN-PFKDLKALLRLYRL-- 75 (359)
T ss_pred eeEEEecchhHHHHHHHHHHHHHhc-CCeeEEEecCCCccc--ccccCCceEEeccccccccC-hHhHHHHHHHHHHH--
Confidence 4444444333333455567777775 999999997765422 34456888888872110010 10111111111111
Q ss_pred HHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHh-hcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhc
Q 014316 87 QFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGK 165 (427)
Q Consensus 87 ~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 165 (427)
.+..+||+||+++. ...+.+.+.++ ..+.++++++|++.+.. .........+..++++..+
T Consensus 76 ----------~~~~~~dvv~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 137 (359)
T cd03808 76 ----------LRKERPDIVHTHTP---KPGILGRLAARLAGVPKVIYTVHGLGFVF-----TSGGLKRRLYLLLERLALR 137 (359)
T ss_pred ----------HHhcCCCEEEEccc---cchhHHHHHHHHcCCCCEEEEecCcchhh-----ccchhHHHHHHHHHHHHHh
Confidence 12379999999973 22333455555 45667888889885421 1112245567788899999
Q ss_pred cCCEEEEcCHHHHHHHHHhhCC----eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccc
Q 014316 166 MANGCLCVTQAMQHELAQNWGI----KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADE 240 (427)
Q Consensus 166 ~ad~vi~vS~~~~~~l~~~~~~----~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (427)
.+|.++++|+.+++.+.+.+.. .+.+++++ +.+.+.+...
T Consensus 138 ~~d~ii~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------- 182 (359)
T cd03808 138 FTDKVIFQNEDDRDLALKLGIIKKKKTVLIPGSGVDLDRFSPSPE----------------------------------- 182 (359)
T ss_pred hccEEEEcCHHHHHHHHHhcCCCcCceEEecCCCCChhhcCcccc-----------------------------------
Confidence 9999999999999998876543 25555666 4433322210
Q ss_pred hhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEE
Q 014316 241 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFI 320 (427)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 320 (427)
. ..+++..++|+|++.+.||++.++++++.+.+. .++++|+
T Consensus 183 -----------~-~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~---------------------------~~~~~l~ 223 (359)
T cd03808 183 -----------P-IPEDDPVFLFVARLLKDKGIDELLEAARILKAK---------------------------GPNVRLL 223 (359)
T ss_pred -----------c-cCCCCcEEEEEeccccccCHHHHHHHHHHHHhc---------------------------CCCeEEE
Confidence 0 122345899999999999999999999998765 6889999
Q ss_pred EEeCCCChHHHHHH-HHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc
Q 014316 321 ITGKGPDKESYEEK-IRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC 398 (427)
Q Consensus 321 i~G~G~~~~~~~~~-~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g 398 (427)
++|.|+..+..... +.+++. ++|.|.|. .+++.++|+.||++++| |..|++|++++|||+||+|||+|+.++
T Consensus 224 i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~adi~i~p---s~~e~~~~~~~Ea~~~G~Pvi~s~~~~ 297 (359)
T cd03808 224 LVGDGDEENPAAILEIEKLGLEGRVEFLGF---RDDVPELLAAADVFVLP---SYREGLPRVLLEAMAMGRPVIATDVPG 297 (359)
T ss_pred EEcCCCcchhhHHHHHHhcCCcceEEEeec---cccHHHHHHhccEEEec---CcccCcchHHHHHHHcCCCEEEecCCC
Confidence 99999876665544 566666 48999997 88999999999999997 666999999999999999999999999
Q ss_pred cccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 399 IEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 399 ~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
..|++.++.+|+++ +|+++++++|.++
T Consensus 298 ~~~~i~~~~~g~~~~~~~~~~~~~~i~~l 326 (359)
T cd03808 298 CREAVIDGVNGFLVPPGDAEALADAIERL 326 (359)
T ss_pred chhhhhcCcceEEECCCCHHHHHHHHHHH
Confidence 99999999999999 4689999998875
No 30
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=6.6e-31 Score=274.03 Aligned_cols=269 Identities=16% Similarity=0.110 Sum_probs=187.9
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcC---CcEEEEecccchhhh-h---h-hcCCC-chH-HHH-----HHHHHHHHh
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRR---SAFIVDWHNFGYTLL-S---L-SLGRR-SHF-VSI-----YRWIEKYYG 164 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~---~p~i~~~h~~~~~~~-~---~-~~~~~-~~~-~~~-----~~~~e~~~~ 164 (427)
.+|||||+|+ ..+.+++.+++...+ +|+|+|+|+..+.-. . . ..+.. ..+ ... ...+.+...
T Consensus 127 ~~~DiiH~hd---w~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 203 (473)
T TIGR02095 127 WQPDVVHAHD---WHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGI 203 (473)
T ss_pred CCCCEEEECC---cHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHH
Confidence 6899999998 555665666666554 999999999854210 0 0 00000 000 000 012345667
Q ss_pred ccCCEEEEcCHHHHHHHHHh-h-----------CCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccC
Q 014316 165 KMANGCLCVTQAMQHELAQN-W-----------GIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSN 231 (427)
Q Consensus 165 ~~ad~vi~vS~~~~~~l~~~-~-----------~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (427)
+.||.+++||+.+++++... + ..++.+|+|| |.+.|.|.....-.. ++. +.
T Consensus 204 ~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~---~~~------------~~- 267 (473)
T TIGR02095 204 VYADRVTTVSPTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKA---NYS------------AD- 267 (473)
T ss_pred HhCCcCeecCHhHHHHhcCCcCCccchhHHHhcCCCeEEEeCCCCccccCCCCCccccc---CcC------------cc-
Confidence 89999999999999887642 1 1248899999 878776542100000 000 00
Q ss_pred CCCCCCccchhhhcccccccccCC-CCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCc
Q 014316 232 GMEGQKADETIFTSLAGIDVFLKP-NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGK 310 (427)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (427)
..+....+ +...+++++++. ++..+|+|+||+.++||++.|++|++.+.+.
T Consensus 268 ~~~~k~~~----k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~------------------------ 319 (473)
T TIGR02095 268 DLAGKAEN----KEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLEL------------------------ 319 (473)
T ss_pred chhhhhhh----HHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHc------------------------
Confidence 00000000 011222334443 1334899999999999999999999998753
Q ss_pred ccCCCCEEEEEEeCCC--ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCC
Q 014316 311 QYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCG 388 (427)
Q Consensus 311 ~~~~~~~~l~i~G~G~--~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G 388 (427)
+++|+|+|+|+ ..+.+++++++++ .++.|.+. .+.+++..+|++||++++| |..|+||++++|||+||
T Consensus 320 -----~~~lvi~G~g~~~~~~~l~~~~~~~~-~~v~~~~~-~~~~~~~~~~~~aDv~l~p---S~~E~~gl~~lEAma~G 389 (473)
T TIGR02095 320 -----GGQLVVLGTGDPELEEALRELAERYP-GNVRVIIG-YDEALAHLIYAGADFILMP---SRFEPCGLTQLYAMRYG 389 (473)
T ss_pred -----CcEEEEECCCCHHHHHHHHHHHHHCC-CcEEEEEc-CCHHHHHHHHHhCCEEEeC---CCcCCcHHHHHHHHHCC
Confidence 49999999995 3456777777654 56888887 7888899999999999997 88899999999999999
Q ss_pred CcEEEeccCccccceecC------CcEEEe--CChHHHHHHHHHh
Q 014316 389 LPVCAVSYSCIEELVKVD------KNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 389 ~PVIas~~~g~~e~v~~~------~~G~l~--~~~~~la~~l~~~ 425 (427)
+|+|+|++||..|+|.++ .+|+++ .|+++|+++|.++
T Consensus 390 ~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~ 434 (473)
T TIGR02095 390 TVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRA 434 (473)
T ss_pred CCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHH
Confidence 999999999999999998 899999 5789999998764
No 31
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=100.00 E-value=8.9e-31 Score=259.45 Aligned_cols=236 Identities=24% Similarity=0.224 Sum_probs=191.2
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
..++|+||+|.+. ....++.+.++..++|++++.|+.... .... .+.++...+.+|.++|+|+.++
T Consensus 77 ~~~~Dii~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~------~~~~~~~~~~~~~vi~~s~~~~ 142 (355)
T cd03799 77 RLGIDHIHAHFGT--TPATVAMLASRLGGIPYSFTAHGKDIF------RSPD------AIDLDEKLARADFVVAISEYNR 142 (355)
T ss_pred hcCCCEEEECCCC--chHHHHHHHHHhcCCCEEEEEeccccc------ccCc------hHHHHHHHhhCCEEEECCHHHH
Confidence 4789999999843 333445666666789999999976320 1111 0456667789999999999999
Q ss_pred HHHHHhhCC---eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccC
Q 014316 179 HELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (427)
Q Consensus 179 ~~l~~~~~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (427)
+.+.+.++. ++.+++|+ +.+.|.+.. ...
T Consensus 143 ~~l~~~~~~~~~~~~vi~~~~d~~~~~~~~-----------------------------------------------~~~ 175 (355)
T cd03799 143 QQLIRLLGCDPDKIHVVHCGVDLERFPPRP-----------------------------------------------PPP 175 (355)
T ss_pred HHHHHhcCCCcccEEEEeCCcCHHHcCCcc-----------------------------------------------ccc
Confidence 999886433 38899999 544443221 001
Q ss_pred CCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHH
Q 014316 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEK 334 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~ 334 (427)
.+++..|+|+|++.+.||++.+++++..+.+. .++++|.++|+|+..+++++.
T Consensus 176 ~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~---------------------------~~~~~l~i~G~~~~~~~~~~~ 228 (355)
T cd03799 176 PGEPLRILSVGRLVEKKGLDYLLEALALLKDR---------------------------GIDFRLDIVGDGPLRDELEAL 228 (355)
T ss_pred cCCCeEEEEEeeeccccCHHHHHHHHHHHhhc---------------------------CCCeEEEEEECCccHHHHHHH
Confidence 22345899999999999999999999998764 678999999999999999999
Q ss_pred HHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCC------CCCchHHHHHHcCCCcEEEeccCccccceecCC
Q 014316 335 IRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG------LDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDK 407 (427)
Q Consensus 335 ~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~------e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~ 407 (427)
++++++. +|.|.|. ++.+++..+|++||++++| |.. |++|++++|||+||+|||+++.|+.+|++.++.
T Consensus 229 ~~~~~~~~~v~~~g~-~~~~~l~~~~~~adi~l~~---s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~ 304 (355)
T cd03799 229 IAELGLEDRVTLLGA-KSQEEVRELLRAADLFVLP---SVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGE 304 (355)
T ss_pred HHHcCCCCeEEECCc-CChHHHHHHHHhCCEEEec---ceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCC
Confidence 9999884 8999997 9999999999999999997 444 999999999999999999999999999999999
Q ss_pred cEEEe--CChHHHHHHHHHhc
Q 014316 408 NGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 408 ~G~l~--~~~~~la~~l~~~~ 426 (427)
+|+++ +|.++++++|.++.
T Consensus 305 ~g~~~~~~~~~~l~~~i~~~~ 325 (355)
T cd03799 305 TGLLVPPGDPEALADAIERLL 325 (355)
T ss_pred ceEEeCCCCHHHHHHHHHHHH
Confidence 99999 47899999998753
No 32
>PLN02316 synthase/transferase
Probab=100.00 E-value=3.5e-30 Score=282.36 Aligned_cols=255 Identities=15% Similarity=0.112 Sum_probs=182.1
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHh------hcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEc
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASS------LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCV 173 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~------~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~v 173 (427)
.+|||||+|+ +.+.+++.+++. +.++|+|+|+|+..+ + .. . .+...+.||.|++|
T Consensus 708 ~~PDIIHaHD---W~talva~llk~~~~~~~~~~~p~V~TiHnl~~-------~-~n-------~-lk~~l~~AD~ViTV 768 (1036)
T PLN02316 708 FHPDIIHCHD---WSSAPVAWLFKDHYAHYGLSKARVVFTIHNLEF-------G-AN-------H-IGKAMAYADKATTV 768 (1036)
T ss_pred CCCCEEEECC---ChHHHHHHHHHHhhhhhccCCCCEEEEeCCccc-------c-hh-------H-HHHHHHHCCEEEeC
Confidence 5899999998 555555555544 246899999999854 1 11 1 12344689999999
Q ss_pred CHHHHHHHHHhhC-----CeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccc
Q 014316 174 TQAMQHELAQNWG-----IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLA 247 (427)
Q Consensus 174 S~~~~~~l~~~~~-----~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (427)
|+.+++++...+. .++.+|+|| |.+.|.|.........| .+. ....++.. -+..+
T Consensus 769 S~tya~EI~~~~~l~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y---------------~~~-~~~~gK~~---~k~~L 829 (1036)
T PLN02316 769 SPTYSREVSGNSAIAPHLYKFHGILNGIDPDIWDPYNDNFIPVPY---------------TSE-NVVEGKRA---AKEAL 829 (1036)
T ss_pred CHHHHHHHHhccCcccccCCEEEEECCccccccCCcccccccccC---------------Cch-hhhhhhhh---hHHHH
Confidence 9999999876543 248999999 88777654210000000 000 00000000 00012
Q ss_pred ccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCC
Q 014316 248 GIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD 327 (427)
Q Consensus 248 ~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~ 327 (427)
+++++++..+..+|+++||+.++||++.|++|+..+.+. +++|+|+|+||+
T Consensus 830 r~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~-----------------------------~~qlVIvG~Gpd 880 (1036)
T PLN02316 830 QQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER-----------------------------NGQVVLLGSAPD 880 (1036)
T ss_pred HHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc-----------------------------CcEEEEEeCCCC
Confidence 233445432334899999999999999999999987643 689999999986
Q ss_pred ---hHHHHHHHHHcCC---CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcccc
Q 014316 328 ---KESYEEKIRRLRL---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEE 401 (427)
Q Consensus 328 ---~~~~~~~~~~l~l---~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e 401 (427)
.+.++++++++++ ++|.|.|. .+......+|++||++|+| |..|+||++++|||+||+|+|++++||++|
T Consensus 881 ~~~e~~l~~La~~Lg~~~~~rV~f~g~-~de~lah~iyaaADiflmP---S~~EP~GLvqLEAMa~GtppVvs~vGGL~D 956 (1036)
T PLN02316 881 PRIQNDFVNLANQLHSSHHDRARLCLT-YDEPLSHLIYAGADFILVP---SIFEPCGLTQLTAMRYGSIPVVRKTGGLFD 956 (1036)
T ss_pred HHHHHHHHHHHHHhCccCCCeEEEEec-CCHHHHHHHHHhCcEEEeC---CcccCccHHHHHHHHcCCCeEEEcCCCcHh
Confidence 3567888998876 36999887 3333335899999999998 889999999999999999999999999999
Q ss_pred ceecC-------------CcEEEe--CChHHHHHHHHHh
Q 014316 402 LVKVD-------------KNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 402 ~v~~~-------------~~G~l~--~~~~~la~~l~~~ 425 (427)
+|.++ .+|++| .++++|+++|.+.
T Consensus 957 tV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~ra 995 (1036)
T PLN02316 957 TVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRA 995 (1036)
T ss_pred hccccccccccccccccCCceEEeCCCCHHHHHHHHHHH
Confidence 99884 689999 4688888888764
No 33
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.98 E-value=6.8e-30 Score=253.57 Aligned_cols=238 Identities=19% Similarity=0.238 Sum_probs=186.1
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhh-cCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~-~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
.+||+||+|.+. ...++.++++. .+.|++++.|+... .. ....++.++..+.++.++++|+..+
T Consensus 78 ~~pdiv~~~~~~---~~~~~~l~~~~~~~~~~v~~~h~~~~---------~~---~~~~~~~~~~~~~~~~~~~~s~~~~ 142 (360)
T cd04951 78 FKPDVVHAHMFH---ANIFARLLRLFLPSPPLICTAHSKNE---------GG---RLRMLAYRLTDFLSDLTTNVSKEAL 142 (360)
T ss_pred cCCCEEEEcccc---hHHHHHHHHhhCCCCcEEEEeeccCc---------hh---HHHHHHHHHHhhccCceEEEcHHHH
Confidence 799999999843 23334444443 46789999998732 11 2234455566677899999999999
Q ss_pred HHHHHhhCC---eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccC
Q 014316 179 HELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (427)
Q Consensus 179 ~~l~~~~~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (427)
+++.+.... ++.++||| +...|.+... ...+... ++...
T Consensus 143 ~~~~~~~~~~~~~~~~i~ng~~~~~~~~~~~-~~~~~~~------------------------------------~~~~~ 185 (360)
T cd04951 143 DYFIASKAFNANKSFVVYNGIDTDRFRKDPA-RRLKIRN------------------------------------ALGVK 185 (360)
T ss_pred HHHHhccCCCcccEEEEccccchhhcCcchH-HHHHHHH------------------------------------HcCcC
Confidence 998876543 38899999 6665544321 1112111 11233
Q ss_pred CCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHH
Q 014316 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEK 334 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~ 334 (427)
.+ ..+++|+|++.+.||++.+++|++.+.+. .|+++|+|+|+|+..+++++.
T Consensus 186 ~~-~~~~l~~g~~~~~kg~~~li~a~~~l~~~---------------------------~~~~~l~i~G~g~~~~~~~~~ 237 (360)
T cd04951 186 ND-TFVILAVGRLVEAKDYPNLLKAFAKLLSD---------------------------YLDIKLLIAGDGPLRATLERL 237 (360)
T ss_pred CC-CEEEEEEeeCchhcCcHHHHHHHHHHHhh---------------------------CCCeEEEEEcCCCcHHHHHHH
Confidence 33 35899999999999999999999998876 689999999999999999999
Q ss_pred HHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe-
Q 014316 335 IRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF- 412 (427)
Q Consensus 335 ~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~- 412 (427)
++++++. +|.|+|. .+++..+|+.||++++| |..|++|++++||||+|+|||+++.|+..|++++ +|+++
T Consensus 238 ~~~~~~~~~v~~~g~---~~~~~~~~~~ad~~v~~---s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~~ 309 (360)
T cd04951 238 IKALGLSNRVKLLGL---RDDIAAYYNAADLFVLS---SAWEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIVP 309 (360)
T ss_pred HHhcCCCCcEEEecc---cccHHHHHHhhceEEec---ccccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEeC
Confidence 9998885 7999997 78999999999999997 7779999999999999999999999999999976 67777
Q ss_pred -CChHHHHHHHHHh
Q 014316 413 -SSSSELADQLLVN 425 (427)
Q Consensus 413 -~~~~~la~~l~~~ 425 (427)
+|.++++++|.++
T Consensus 310 ~~~~~~~~~~i~~l 323 (360)
T cd04951 310 ISDPEALANKIDEI 323 (360)
T ss_pred CCCHHHHHHHHHHH
Confidence 7889999999876
No 34
>PRK14099 glycogen synthase; Provisional
Probab=99.98 E-value=8.2e-30 Score=266.13 Aligned_cols=267 Identities=15% Similarity=0.101 Sum_probs=182.3
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHh--hcCCcEEEEecccchhhhh-h----hcCCC-chH----HHHHH--HHHHHHhc
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASS--LRRSAFIVDWHNFGYTLLS-L----SLGRR-SHF----VSIYR--WIEKYYGK 165 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~--~~~~p~i~~~h~~~~~~~~-~----~~~~~-~~~----~~~~~--~~e~~~~~ 165 (427)
.+|||||+|+ +.+.++..++.. ..++|+|+|+|+..|.... . ..+.. ..+ ...+. .+.+...+
T Consensus 132 ~~pDIiH~Hd---w~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~ 208 (485)
T PRK14099 132 FVPDIVHAHD---WQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQ 208 (485)
T ss_pred CCCCEEEECC---cHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCchhhhhCCCccHHHHHHH
Confidence 6899999999 555554544443 2468999999998652100 0 00000 000 00000 13566778
Q ss_pred cCCEEEEcCHHHHHHHHHhh------------CCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCC
Q 014316 166 MANGCLCVTQAMQHELAQNW------------GIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNG 232 (427)
Q Consensus 166 ~ad~vi~vS~~~~~~l~~~~------------~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (427)
.||.|+|||+..++++++.+ ..++.+|+|| |.+.|.|.....-...|.. .
T Consensus 209 ~ad~vitVS~~~a~ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~-----------------~ 271 (485)
T PRK14099 209 LADRITTVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDV-----------------E 271 (485)
T ss_pred hcCeeeecChhHHHHHhcccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCCh-----------------h
Confidence 99999999999999987532 2248999999 8888876532110000000 0
Q ss_pred CCCCCccchhhhcccccccccCCC-CCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcc
Q 014316 233 MEGQKADETIFTSLAGIDVFLKPN-RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQ 311 (427)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (427)
....+. .-+...+++++++.+ ...+|+++||+.++||++.|++|++.+.+.
T Consensus 272 ~~~~k~---~~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~------------------------- 323 (485)
T PRK14099 272 TLAARA---ANKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE------------------------- 323 (485)
T ss_pred HHHhHH---HhHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc-------------------------
Confidence 000000 000002223344332 234889999999999999999999988643
Q ss_pred cCCCCEEEEEEeCCCC--hHHHHHHHHHcCCCcEEEecCCCCcccHHHHH-hcCcEEEeeccCCCCCCCchHHHHHHcCC
Q 014316 312 YLYPRLLFIITGKGPD--KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLL-GSADLGVCLHTSSSGLDLPMKVVDMFGCG 388 (427)
Q Consensus 312 ~~~~~~~l~i~G~G~~--~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l-~~adi~v~p~~~s~~e~~p~~~lEama~G 388 (427)
+++|+|+|+|+. ++.+++++++++...+.|+|+ .+++..+| ++||++|+| |..|+||++++|||+||
T Consensus 324 ----~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~---~~~l~~~~~a~aDifv~P---S~~E~fGl~~lEAma~G 393 (485)
T PRK14099 324 ----GAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGY---DEALAHLIQAGADALLVP---SRFEPCGLTQLCALRYG 393 (485)
T ss_pred ----CcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCC---CHHHHHHHHhcCCEEEEC---CccCCCcHHHHHHHHCC
Confidence 689999999963 567777877765223478897 88999887 579999998 88899999999999999
Q ss_pred CcEEEeccCccccceecC---------CcEEEe--CChHHHHHHHHH
Q 014316 389 LPVCAVSYSCIEELVKVD---------KNGLLF--SSSSELADQLLV 424 (427)
Q Consensus 389 ~PVIas~~~g~~e~v~~~---------~~G~l~--~~~~~la~~l~~ 424 (427)
+|+|+|++||++|+|.++ .+|+++ .|+++|+++|.+
T Consensus 394 ~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~ 440 (485)
T PRK14099 394 AVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRK 440 (485)
T ss_pred CCcEEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHH
Confidence 988889999999999876 689999 578999999875
No 35
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.98 E-value=3e-30 Score=259.56 Aligned_cols=227 Identities=16% Similarity=0.204 Sum_probs=173.8
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCc--EEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSA--FIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQA 176 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p--~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~ 176 (427)
..+||+||+|+ ......+.++++..+.| ++.+.|.. . ... ... ...+ .+.+|.++++|+.
T Consensus 82 ~~~~Dii~~~~---~~~~~~~~~~~~~~~~~~~~~~~~h~~-~-------~~~-~~~----~~~~--~~~~d~~i~~S~~ 143 (359)
T PRK09922 82 ETQPDIVICID---VISCLYANKARKKSGKQFKIFSWPHFS-L-------DHK-KHA----ECKK--ITCADYHLAISSG 143 (359)
T ss_pred hcCCCEEEEcC---HHHHHHHHHHHHHhCCCCeEEEEecCc-c-------ccc-chh----hhhh--hhcCCEEEEcCHH
Confidence 38999999998 33334456666666655 34445533 1 011 111 1111 2689999999999
Q ss_pred HHHHHHHhhCCe---EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccc
Q 014316 177 MQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVF 252 (427)
Q Consensus 177 ~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (427)
.++++.+. +.+ +.+|||+ +.+.+....
T Consensus 144 ~~~~~~~~-~~~~~ki~vi~N~id~~~~~~~~------------------------------------------------ 174 (359)
T PRK09922 144 IKEQMMAR-GISAQRISVIYNPVEIKTIIIPP------------------------------------------------ 174 (359)
T ss_pred HHHHHHHc-CCCHHHEEEEcCCCCHHHccCCC------------------------------------------------
Confidence 99998764 543 8999998 533221110
Q ss_pred cCCCCCeEEEEEeecC--CCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHH
Q 014316 253 LKPNRPALVVSSTSWT--PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 330 (427)
Q Consensus 253 ~~~~~~~~i~~~g~~~--~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~ 330 (427)
...+.+..++|+||+. +.||++.+++|++.+. ++++|+|+|+|++.++
T Consensus 175 ~~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~------------------------------~~~~l~ivG~g~~~~~ 224 (359)
T PRK09922 175 PERDKPAVFLYVGRLKFEGQKNVKELFDGLSQTT------------------------------GEWQLHIIGDGSDFEK 224 (359)
T ss_pred cccCCCcEEEEEEEEecccCcCHHHHHHHHHhhC------------------------------CCeEEEEEeCCccHHH
Confidence 0011235899999986 4699999999998753 3699999999999999
Q ss_pred HHHHHHHcCCC-cEEEecCCCC--cccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec-cCccccceecC
Q 014316 331 YEEKIRRLRLK-RVAFRTMWLS--AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVKVD 406 (427)
Q Consensus 331 ~~~~~~~l~l~-~V~f~g~~~~--~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~-~~g~~e~v~~~ 406 (427)
++++++++++. +|.|+|. ++ .+++.++|+.+|++|+| |..|+||++++||||||+|||+|+ .||..|++.++
T Consensus 225 l~~~~~~~~l~~~v~f~G~-~~~~~~~~~~~~~~~d~~v~~---s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~ 300 (359)
T PRK09922 225 CKAYSRELGIEQRIIWHGW-QSQPWEVVQQKIKNVSALLLT---SKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPG 300 (359)
T ss_pred HHHHHHHcCCCCeEEEecc-cCCcHHHHHHHHhcCcEEEEC---CcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCC
Confidence 99999999985 8999997 54 37889999999999997 778999999999999999999999 89999999999
Q ss_pred CcEEEe--CChHHHHHHHHHhc
Q 014316 407 KNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 407 ~~G~l~--~~~~~la~~l~~~~ 426 (427)
.+|+++ +|++++|++|.++.
T Consensus 301 ~~G~lv~~~d~~~la~~i~~l~ 322 (359)
T PRK09922 301 LNGELYTPGNIDEFVGKLNKVI 322 (359)
T ss_pred CceEEECCCCHHHHHHHHHHHH
Confidence 999998 67999999998764
No 36
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.98 E-value=1.1e-29 Score=248.22 Aligned_cols=249 Identities=24% Similarity=0.346 Sum_probs=197.8
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
..++|+||++++... ....+.++..++|+++++|+..+..... ............++...+.+|.++++|+.++
T Consensus 83 ~~~~Dii~~~~~~~~---~~~~~~~~~~~~~~i~~~h~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~ 156 (374)
T cd03801 83 RERFDVVHAHDWLAL---LAAALAARLLGIPLVLTVHGLEFGRPGN---ELGLLLKLARALERRALRRADRIIAVSEATR 156 (374)
T ss_pred hcCCcEEEEechhHH---HHHHHHHHhcCCcEEEEeccchhhcccc---chhHHHHHHHHHHHHHHHhCCEEEEecHHHH
Confidence 378999999984332 2223567778999999999984421110 0122244556778888899999999999999
Q ss_pred HHHHHhhCC---eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccC
Q 014316 179 HELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (427)
Q Consensus 179 ~~l~~~~~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (427)
+.+.+.++. ++.+++|+ +...+.+.....+.. ...
T Consensus 157 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-----------------------------------------~~~ 195 (374)
T cd03801 157 EELRELGGVPPEKITVIPNGVDTERFRPAPRAARRR-----------------------------------------LGI 195 (374)
T ss_pred HHHHhcCCCCCCcEEEecCcccccccCccchHHHhh-----------------------------------------cCC
Confidence 999988776 58999999 655554332000000 112
Q ss_pred CCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHH
Q 014316 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEK 334 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~ 334 (427)
.++...++|+|++.+.||++.+++|+..+.+. .++++|+++|.|+..+.+++.
T Consensus 196 ~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~---------------------------~~~~~l~i~G~~~~~~~~~~~ 248 (374)
T cd03801 196 PEDEPVILFVGRLVPRKGVDLLLEALAKLRKE---------------------------YPDVRLVIVGDGPLREELEAL 248 (374)
T ss_pred cCCCeEEEEecchhhhcCHHHHHHHHHHHhhh---------------------------cCCeEEEEEeCcHHHHHHHHH
Confidence 23346899999999999999999999999876 678999999999988888888
Q ss_pred HHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe-
Q 014316 335 IRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF- 412 (427)
Q Consensus 335 ~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~- 412 (427)
+++++.. +|.|.|. ++.+++..+++.||++++| +..|++|++++|||++|+|||+++.++..|++.++.+|+++
T Consensus 249 ~~~~~~~~~v~~~g~-~~~~~~~~~~~~~di~i~~---~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~ 324 (374)
T cd03801 249 AAELGLGDRVTFLGF-VPDEDLPALYAAADVFVLP---SLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVP 324 (374)
T ss_pred HHHhCCCcceEEEec-cChhhHHHHHHhcCEEEec---chhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeC
Confidence 8888874 8999997 9999999999999999997 55599999999999999999999999999999999999999
Q ss_pred -CChHHHHHHHHHh
Q 014316 413 -SSSSELADQLLVN 425 (427)
Q Consensus 413 -~~~~~la~~l~~~ 425 (427)
.|+++++++|.++
T Consensus 325 ~~~~~~l~~~i~~~ 338 (374)
T cd03801 325 PGDPEALAEAILRL 338 (374)
T ss_pred CCCHHHHHHHHHHH
Confidence 3469999998875
No 37
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.98 E-value=1.7e-29 Score=271.34 Aligned_cols=337 Identities=14% Similarity=0.103 Sum_probs=213.4
Q ss_pred HHhhCCC----cEEEEecCCCC--------CcccccCCCceEEEEeecCCCCCCC--CcchhhHHHHHHHHHHHHHH-HH
Q 014316 28 LARQMSL----EVDVVAYGGSK--------PHAAILEHPSIHIHTMTQWPTIPRG--LPKVLKPVLLLLKPLIQFFM-LL 92 (427)
Q Consensus 28 La~~~g~----~V~vi~~~~~~--------~~~~~~~~~~i~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~ 92 (427)
|++ .|| +|+|+|-.... +...+...+|+++.++| ..+... ++++... ..++..+-.+-. +.
T Consensus 300 La~-~G~~v~~~V~I~TR~~~~~~~~~~~~~~e~~~~~~~~~I~rvp--~g~~~~~~~~~~i~k-~~l~p~l~~f~~~~~ 375 (784)
T TIGR02470 300 IKL-QGLEITPKILIVTRLIPDAEGTTCNQRLEKVYGTEHAWILRVP--FRTENGIILRNWISR-FEIWPYLETFAEDAE 375 (784)
T ss_pred HHh-cCCCccceEEEEecCCCCccccccccccccccCCCceEEEEec--CCCCcccccccccCH-HHHHHHHHHHHHHHH
Confidence 456 499 77799954321 11233335699999999 333211 1221110 011111211111 11
Q ss_pred HHHHhh-hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchH---HHHHHH--HHHHHhcc
Q 014316 93 WFLCVK-IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHF---VSIYRW--IEKYYGKM 166 (427)
Q Consensus 93 ~~~~~~-~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~---~~~~~~--~e~~~~~~ 166 (427)
..+... ..+||+||+|. ..+.+++.++++..++|++.+.|.++..-...+....... ..+... .|..+...
T Consensus 376 ~~~~~~~~~~pDlIHahy---~d~glva~lla~~lgVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~~~r~~ae~~~~~~ 452 (784)
T TIGR02470 376 KEILAELQGKPDLIIGNY---SDGNLVASLLARKLGVTQCTIAHALEKTKYPDSDIYWQEFEDKYHFSCQFTADLIAMNA 452 (784)
T ss_pred HHHHHhcCCCCCEEEECC---CchHHHHHHHHHhcCCCEEEECCcchhhcccccccccccchhHHHhhhhhhHHHHHHhc
Confidence 111111 25799999998 7777778999999999999999987431111000001101 111111 25677888
Q ss_pred CCEEEEcCHHHHHHH---HHhh----------------CC-----eEEEecCC-CCCCcCCCChHHHH--HHHhhhhhcc
Q 014316 167 ANGCLCVTQAMQHEL---AQNW----------------GI-----KATVLYDQ-PPEFFHPTSLEEKH--ELFCRLNKIL 219 (427)
Q Consensus 167 ad~vi~vS~~~~~~l---~~~~----------------~~-----~~~vi~n~-~~~~f~~~~~~~~~--~~~~~~~~~~ 219 (427)
||.||+.|....... ...| |+ ++.+||+| |...|.|.+...+. .+...+
T Consensus 453 AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~i---- 528 (784)
T TIGR02470 453 ADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEI---- 528 (784)
T ss_pred CCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcch----
Confidence 999999997653311 1111 11 26789999 88878776532211 010000
Q ss_pred cCCCCccccccCCCCCCCccchhhhcc-ccccccc--CCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCC
Q 014316 220 HQPLGVQDCVSNGMEGQKADETIFTSL-AGIDVFL--KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDS 296 (427)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~ 296 (427)
+.-.|... .++.++. .++++ +|+++||+.+.||++.|++|+..+.+.
T Consensus 529 -------------------e~ll~~~~~~~~~~G~l~d~~kp-iIl~VGRL~~~KGid~LIeA~~~l~~l---------- 578 (784)
T TIGR02470 529 -------------------EELLFSLEDNDEHYGYLKDPNKP-IIFSMARLDRVKNLTGLVECYGRSPKL---------- 578 (784)
T ss_pred -------------------hhhccchhhHHHHhCCCCCCCCc-EEEEEeCCCccCCHHHHHHHHHHhHhh----------
Confidence 00000000 0111122 34455 899999999999999999999887543
Q ss_pred chhhhhhhhhcCCcccCCCCEEEEEEeCCCC------------hHHHHHHHHHcCCC-cEEEecCCCCcccHHHHHh---
Q 014316 297 TNEEVFLKEISDGKQYLYPRLLFIITGKGPD------------KESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLG--- 360 (427)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~------------~~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~--- 360 (427)
.+++.|+|+|+|+. .+++.++++++++. +|.|+|...+..+..++|.
T Consensus 579 -----------------~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iA 641 (784)
T TIGR02470 579 -----------------RELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIA 641 (784)
T ss_pred -----------------CCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhh
Confidence 45689999998753 13456678899985 8999997346677777765
Q ss_pred -cCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 361 -SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 361 -~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
.+|++|+| |..|+||++++||||||+|||+|++||+.|+|.++.+|+++ .|++++|++|.++
T Consensus 642 d~adVfV~P---S~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~l 706 (784)
T TIGR02470 642 DTKGIFVQP---ALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDF 706 (784)
T ss_pred ccCcEEEEC---CcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHH
Confidence 34799997 88899999999999999999999999999999999999999 5789999998764
No 38
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.98 E-value=1.3e-29 Score=263.92 Aligned_cols=268 Identities=16% Similarity=0.112 Sum_probs=185.2
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhh------cCCcEEEEecccchhhh----hhh-cCCC--chH------HHHHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSL------RRSAFIVDWHNFGYTLL----SLS-LGRR--SHF------VSIYRWIE 160 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~------~~~p~i~~~h~~~~~~~----~~~-~~~~--~~~------~~~~~~~e 160 (427)
.+||+||+|+ ..+.+++.+++.. .++|+|+|+|+..+.-. ... .+.. ..+ ......++
T Consensus 128 ~~pDviH~hd---~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (476)
T cd03791 128 WKPDIIHCHD---WHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFL 204 (476)
T ss_pred CCCcEEEECc---hHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHH
Confidence 7899999998 4454545455444 48999999999854110 000 0000 000 00012467
Q ss_pred HHHhccCCEEEEcCHHHHHHHHHh------------hCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccc
Q 014316 161 KYYGKMANGCLCVTQAMQHELAQN------------WGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQD 227 (427)
Q Consensus 161 ~~~~~~ad~vi~vS~~~~~~l~~~------------~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (427)
+...+.||.++++|+..++++.+. ...++.+|+|| |.+.|.|.........+..
T Consensus 205 ~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~------------- 271 (476)
T cd03791 205 KAGIVYADAVTTVSPTYAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSA------------- 271 (476)
T ss_pred HHHHHhcCcCeecCHhHHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCc-------------
Confidence 777889999999999999887531 12358999999 7777766432110000000
Q ss_pred cccCCCCCCCccchhhhcccccccccC--CCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhh
Q 014316 228 CVSNGMEGQKADETIFTSLAGIDVFLK--PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKE 305 (427)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 305 (427)
.... ....-+...+++++.+ ++. .+|+|+||+.++||++.|++|++.+.+.
T Consensus 272 ---~~~~----~~~~~k~~l~~~~g~~~~~~~-~~i~~vGrl~~~Kg~~~li~a~~~l~~~------------------- 324 (476)
T cd03791 272 ---DDLE----GKAENKAALQEELGLPVDPDA-PLFGFVGRLTEQKGIDLLLEALPELLEL------------------- 324 (476)
T ss_pred ---cccc----cHHHHHHHHHHHcCCCcCCCC-CEEEEEeeccccccHHHHHHHHHHHHHc-------------------
Confidence 0000 0000001122223332 344 4899999999999999999999998764
Q ss_pred hcCCcccCCCCEEEEEEeCCCC--hHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHH
Q 014316 306 ISDGKQYLYPRLLFIITGKGPD--KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVD 383 (427)
Q Consensus 306 ~~~~~~~~~~~~~l~i~G~G~~--~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lE 383 (427)
+++|+++|+|+. .+.++++++++ .+++.|.+. .+.+.+..+|++||++++| |..|++|++++|
T Consensus 325 ----------~~~lvi~G~g~~~~~~~~~~~~~~~-~~~v~~~~~-~~~~~~~~~~~~aDv~l~p---S~~E~~gl~~lE 389 (476)
T cd03791 325 ----------GGQLVILGSGDPEYEEALRELAARY-PGRVAVLIG-YDEALAHLIYAGADFFLMP---SRFEPCGLTQMY 389 (476)
T ss_pred ----------CcEEEEEecCCHHHHHHHHHHHHhC-CCcEEEEEe-CCHHHHHHHHHhCCEEECC---CCCCCCcHHHHH
Confidence 489999999953 24556666655 357887766 5677788999999999997 778999999999
Q ss_pred HHcCCCcEEEeccCccccceecCC------cEEEe--CChHHHHHHHHHh
Q 014316 384 MFGCGLPVCAVSYSCIEELVKVDK------NGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 384 ama~G~PVIas~~~g~~e~v~~~~------~G~l~--~~~~~la~~l~~~ 425 (427)
||+||+|||++++||+.|++.++. +|+++ .|+++++++|.++
T Consensus 390 Ama~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~ 439 (476)
T cd03791 390 AMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRA 439 (476)
T ss_pred HhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHH
Confidence 999999999999999999999988 99999 5689999998764
No 39
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.98 E-value=1.3e-29 Score=246.96 Aligned_cols=309 Identities=23% Similarity=0.269 Sum_probs=216.6
Q ss_pred EEEEEeCC-CCCChh-HHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCc--eEEEEeecCCCCCCCCcchhhHHHHHH
Q 014316 7 ACVVVLGD-LGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPS--IHIHTMTQWPTIPRGLPKVLKPVLLLL 82 (427)
Q Consensus 7 ~~v~~~~~-~~~~~r-~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~--i~v~~~~~~~~~~~~~~~~~~~~~~~~ 82 (427)
+++++.+. .|+..+ +...+.+|.+. ||+|++++............... ....... ............+.
T Consensus 2 Il~~~~~~~~gG~~~~~~~l~~~l~~~-g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 74 (353)
T cd03811 2 ILFVIPSLGGGGAERVLLNLANGLDKR-GYDVTLVVLRDEGDYLELLPSNVKLIPVRVLK------LKSLRDLLAILRLR 74 (353)
T ss_pred eEEEeecccCCCcchhHHHHHHHHHhc-CceEEEEEcCCCCccccccccchhhhceeeee------cccccchhHHHHHH
Confidence 44444332 455555 45566777775 99999999765442221111100 0111111 01111222223333
Q ss_pred HHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHH
Q 014316 83 KPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKY 162 (427)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~ 162 (427)
+.+. ..+||+|+++++ ....++..+..+. ++|+++++|+...... ...... ..+++.
T Consensus 75 ~~~~------------~~~~dii~~~~~--~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~-----~~~~~~---~~~~~~ 131 (353)
T cd03811 75 RLLR------------KEKPDVVISHLT--TTPNVLALLAARL-GTKLIVWEHNSLSLEL-----KRKLRL---LLLIRK 131 (353)
T ss_pred HHHH------------hcCCCEEEEcCc--cchhHHHHHHhhc-CCceEEEEcCcchhhh-----ccchhH---HHHHHh
Confidence 3332 278999999984 2333334444444 8999999999843111 000001 156778
Q ss_pred HhccCCEEEEcCHHHHHHHHHhhCC---eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCc
Q 014316 163 YGKMANGCLCVTQAMQHELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKA 238 (427)
Q Consensus 163 ~~~~ad~vi~vS~~~~~~l~~~~~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (427)
..+.+|.++++|+.+++.+.+.++. ++.+++|+ +...+.+...... .
T Consensus 132 ~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~-~---------------------------- 182 (353)
T cd03811 132 LYRRADKIVAVSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEIRALAEEPL-E---------------------------- 182 (353)
T ss_pred hccccceEEEeccchhhhHHHhhcCCccccEEecCCcChhhcCcccchhh-h----------------------------
Confidence 8899999999999999999888773 48999999 5555543321000 0
Q ss_pred cchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEE
Q 014316 239 DETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL 318 (427)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (427)
....+++..++++|++.+.||++.+++|++.+.+. .++++
T Consensus 183 -------------~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~---------------------------~~~~~ 222 (353)
T cd03811 183 -------------LGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKE---------------------------GPDAR 222 (353)
T ss_pred -------------cCCCCCceEEEEEecchhhcChHHHHHHHHHhhhc---------------------------CCCce
Confidence 01123346899999999999999999999999875 67899
Q ss_pred EEEEeCCCChHHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC
Q 014316 319 FIITGKGPDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 319 l~i~G~G~~~~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~ 397 (427)
|+++|.|+..+.+++.++++++. +|.|.|. .+++.++++.||++++| |..|++|++++|||++|+|||+|+.|
T Consensus 223 l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~~d~~i~p---s~~e~~~~~~~Ea~~~G~PvI~~~~~ 296 (353)
T cd03811 223 LVILGDGPLREELEALAKELGLADRVHFLGF---QSNPYPYLKAADLFVLS---SRYEGFPNVLLEAMALGTPVVATDCP 296 (353)
T ss_pred EEEEcCCccHHHHHHHHHhcCCCccEEEecc---cCCHHHHHHhCCEEEeC---cccCCCCcHHHHHHHhCCCEEEcCCC
Confidence 99999999999999999999885 7999997 67899999999999997 77799999999999999999999999
Q ss_pred ccccceecCCcEEEe--CChHHHHH
Q 014316 398 CIEELVKVDKNGLLF--SSSSELAD 420 (427)
Q Consensus 398 g~~e~v~~~~~G~l~--~~~~~la~ 420 (427)
+..|++.++.+|+++ ++.+++++
T Consensus 297 ~~~e~i~~~~~g~~~~~~~~~~~~~ 321 (353)
T cd03811 297 GPREILEDGENGLLVPVGDEAALAA 321 (353)
T ss_pred ChHHHhcCCCceEEECCCCHHHHHH
Confidence 999999999999999 45677743
No 40
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.98 E-value=1.4e-29 Score=248.74 Aligned_cols=318 Identities=21% Similarity=0.223 Sum_probs=227.3
Q ss_pred EEEEEeCCCCCChhH-HHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHH
Q 014316 7 ACVVVLGDLGRSPRM-QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPL 85 (427)
Q Consensus 7 ~~v~~~~~~~~~~r~-~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (427)
+.++.....||.+++ ...+..|.+. ||+|.+++..............+++++.++. .. ..........+.+.+
T Consensus 3 ~~i~~~~~~gG~~~~~~~l~~~l~~~-~~~v~~~~~~~~~~~~~~~~~~~i~v~~~~~--~~---~~~~~~~~~~~~~~~ 76 (365)
T cd03807 3 LHVITGLDVGGAERMLVRLLKGLDRD-RFEHVVISLTDRGELGEELEEAGVPVYCLGK--RP---GRPDPGALLRLYKLI 76 (365)
T ss_pred EEEEeeccCccHHHHHHHHHHHhhhc-cceEEEEecCcchhhhHHHHhcCCeEEEEec--cc---ccccHHHHHHHHHHH
Confidence 334444444665554 3455666665 9999999976543333333446888888872 11 111222223333333
Q ss_pred HHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhh-cCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHh
Q 014316 86 IQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYG 164 (427)
Q Consensus 86 ~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~-~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 164 (427)
. ..+||+||++.+. ......+.++. .+.|++++.|+..+.. .........++++.+.
T Consensus 77 ~------------~~~~div~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 134 (365)
T cd03807 77 R------------RLRPDVVHTWMYH---ADLYGGLAARLAGVPPVIWGIRHSDLDL-------GKKSTRLVARLRRLLS 134 (365)
T ss_pred H------------hhCCCEEEecccc---ccHHHHHHHHhcCCCcEEEEecCCcccc-------cchhHhHHHHHHHHhc
Confidence 2 3799999999733 22223444444 6889999999984311 1223445567788888
Q ss_pred ccCCEEEEcCHHHHHHHHHhhCC---eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccc
Q 014316 165 KMANGCLCVTQAMQHELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADE 240 (427)
Q Consensus 165 ~~ad~vi~vS~~~~~~l~~~~~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (427)
+.+|.++++|+..++.+.+. +. ++.+++|+ +...|.+.... .....
T Consensus 135 ~~~~~~i~~s~~~~~~~~~~-~~~~~~~~vi~~~~~~~~~~~~~~~-~~~~~---------------------------- 184 (365)
T cd03807 135 SFIPLIVANSAAAAEYHQAI-GYPPKKIVVIPNGVDTERFSPDLDA-RARLR---------------------------- 184 (365)
T ss_pred cccCeEEeccHHHHHHHHHc-CCChhheeEeCCCcCHHhcCCcccc-hHHHH----------------------------
Confidence 89999999999999988764 43 37889999 65555433211 11100
Q ss_pred hhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEE
Q 014316 241 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFI 320 (427)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 320 (427)
++.+.+. +...++++|++.+.||++.+++|+..+.+. .++++|+
T Consensus 185 --------~~~~~~~-~~~~i~~~G~~~~~K~~~~li~a~~~l~~~---------------------------~~~~~l~ 228 (365)
T cd03807 185 --------EELGLPE-DTFLIGIVARLHPQKDHATLLRAAALLLKK---------------------------FPNARLL 228 (365)
T ss_pred --------HhcCCCC-CCeEEEEecccchhcCHHHHHHHHHHHHHh---------------------------CCCeEEE
Confidence 1113333 345899999999999999999999999876 7889999
Q ss_pred EEeCCCChHHHHHHHH-HcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc
Q 014316 321 ITGKGPDKESYEEKIR-RLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC 398 (427)
Q Consensus 321 i~G~G~~~~~~~~~~~-~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g 398 (427)
++|.|+..+..++... ++++. +|.|.|. .+++.++|+.||++++| |..|++|++++|||+||+|||+++.|+
T Consensus 229 i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~adi~v~p---s~~e~~~~~~~Ea~a~g~PvI~~~~~~ 302 (365)
T cd03807 229 LVGDGPDRANLELLALKELGLEDKVILLGE---RSDVPALLNALDVFVLS---SLSEGFPNVLLEAMACGLPVVATDVGD 302 (365)
T ss_pred EecCCcchhHHHHHHHHhcCCCceEEEccc---cccHHHHHHhCCEEEeC---CccccCCcHHHHHHhcCCCEEEcCCCC
Confidence 9999998888888877 77875 7999997 78999999999999997 666999999999999999999999999
Q ss_pred cccceecCCcEEEe--CChHHHHHHHHHhc
Q 014316 399 IEELVKVDKNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 399 ~~e~v~~~~~G~l~--~~~~~la~~l~~~~ 426 (427)
..|++.+ +|+++ +|+++++++|.++.
T Consensus 303 ~~e~~~~--~g~~~~~~~~~~l~~~i~~l~ 330 (365)
T cd03807 303 NAELVGD--TGFLVPPGDPEALAEAIEALL 330 (365)
T ss_pred hHHHhhc--CCEEeCCCCHHHHHHHHHHHH
Confidence 9999977 88888 57899999987753
No 41
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.98 E-value=1.3e-29 Score=250.23 Aligned_cols=310 Identities=20% Similarity=0.243 Sum_probs=213.5
Q ss_pred hhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhh
Q 014316 19 PRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVK 98 (427)
Q Consensus 19 ~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (427)
.++...+.+|+++ ||+|++++........... ..+.+...+ ................+.+.+ +
T Consensus 18 ~~~~~l~~~L~~~-g~~v~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~------------~ 80 (364)
T cd03814 18 RTLQRLVEHLRAR-GHEVLVIAPGPFRESEGPA--RVVPVPSVP--LPGYPEIRLALPPRRRVRRLL------------D 80 (364)
T ss_pred hHHHHHHHHHHHC-CCEEEEEeCCchhhccCCC--Cceeecccc--cCcccceEecccchhhHHHHH------------H
Confidence 3456677788886 9999999976543221111 223332222 000111111111111222222 2
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
..+||+||++++.. ..+.+..+++..++|+++++|+. +....... ...........+++++.+.+|.++++|+.++
T Consensus 81 ~~~pdii~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~ 156 (364)
T cd03814 81 AFAPDVVHIATPGP--LGLAALRAARRLGIPVVTSYHTD-FPEYLRYY-GLGPLSWLAWAYLRWFHNRADRVLVPSPSLA 156 (364)
T ss_pred hcCCCEEEEeccch--hhHHHHHHHHHcCCCEEEEEecC-hHHHhhhc-ccchHhHhhHHHHHHHHHhCCEEEeCCHHHH
Confidence 37999999997432 22335566777899999999987 33221111 1223334446677888889999999999999
Q ss_pred HHHHHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCC
Q 014316 179 HELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNR 257 (427)
Q Consensus 179 ~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (427)
+.+.+....++.+++|+ +.+.|.+..... ..+. ... .++
T Consensus 157 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~------------------------------------~~~--~~~ 196 (364)
T cd03814 157 DELRARGFRRVRLWPRGVDTELFHPRRRDE--ALRA------------------------------------RLG--PPD 196 (364)
T ss_pred HHHhccCCCceeecCCCccccccCcccccH--HHHH------------------------------------HhC--CCC
Confidence 86655433448889999 666665432111 1000 001 223
Q ss_pred CeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHHHH
Q 014316 258 PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRR 337 (427)
Q Consensus 258 ~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~~~ 337 (427)
+..++|+|++.+.||++.++++++.+.+ .++++|+++|+|++.+.++
T Consensus 197 ~~~i~~~G~~~~~k~~~~~i~~~~~l~~----------------------------~~~~~l~i~G~~~~~~~~~----- 243 (364)
T cd03814 197 RPVLLYVGRLAPEKNLEALLDADLPLRR----------------------------RPPVRLVIVGDGPARARLE----- 243 (364)
T ss_pred CeEEEEEeccccccCHHHHHHHHHHhhh----------------------------cCCceEEEEeCCchHHHHh-----
Confidence 4589999999999999999999999865 2679999999998766554
Q ss_pred cCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe--CCh
Q 014316 338 LRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSS 415 (427)
Q Consensus 338 l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~--~~~ 415 (427)
...++|.|.|. ++.+++.++|+.||++++| |..|++|++++||||||+|||+++.++..|+++++.+|+++ .+.
T Consensus 244 ~~~~~v~~~g~-~~~~~~~~~~~~~d~~l~~---s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~ 319 (364)
T cd03814 244 ARYPNVHFLGF-LDGEELAAAYASADVFVFP---SRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDA 319 (364)
T ss_pred ccCCcEEEEec-cCHHHHHHHHHhCCEEEEC---cccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCH
Confidence 12258999997 8999999999999999997 77799999999999999999999999999999999999999 456
Q ss_pred HHHHHHHHHhc
Q 014316 416 SELADQLLVNA 426 (427)
Q Consensus 416 ~~la~~l~~~~ 426 (427)
++++++|.++.
T Consensus 320 ~~l~~~i~~l~ 330 (364)
T cd03814 320 EAFAAALAALL 330 (364)
T ss_pred HHHHHHHHHHH
Confidence 77999998763
No 42
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.97 E-value=8.8e-30 Score=263.15 Aligned_cols=246 Identities=14% Similarity=0.174 Sum_probs=185.7
Q ss_pred hhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEE-ecccchhhhhhhcCCCchHHHHHHHHHH--HHhccCCEEEEcC
Q 014316 98 KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVD-WHNFGYTLLSLSLGRRSHFVSIYRWIEK--YYGKMANGCLCVT 174 (427)
Q Consensus 98 ~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~-~h~~~~~~~~~~~~~~~~~~~~~~~~e~--~~~~~ad~vi~vS 174 (427)
+..+||+||+|+ ..+...+.+++++.+.|++++ .|++ ++.. .......-+..+.+ .+.+.+| ++++|
T Consensus 277 r~~rpDIVHt~~---~~a~l~g~laA~lagvpviv~~~h~~-~~~~-----~~r~~~~e~~~~~~a~~i~~~sd-~v~~s 346 (578)
T PRK15490 277 CERKLDYLSVWQ---DGACLMIALAALIAGVPRIQLGLRGL-PPVV-----RKRLFKPEYEPLYQALAVVPGVD-FMSNN 346 (578)
T ss_pred HHcCCCEEEEcC---cccHHHHHHHHHhcCCCEEEEeeccc-CCcc-----hhhHHHHHHHHhhhhceeEecch-hhhcc
Confidence 448999999998 444445788888999999765 5653 3111 11111111111112 2244556 77889
Q ss_pred HHHHHHHHHhhCCe---EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccc
Q 014316 175 QAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGID 250 (427)
Q Consensus 175 ~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (427)
...++.+.+.++.+ +.+|||| |...|.+.... ....+.++.
T Consensus 347 ~~v~~~l~~~lgip~~KI~VIyNGVD~~rf~p~~~~-~~~~r~~~~---------------------------------- 391 (578)
T PRK15490 347 HCVTRHYADWLKLEAKHFQVVYNGVLPPSTEPSSEV-PHKIWQQFT---------------------------------- 391 (578)
T ss_pred HHHHHHHHHHhCCCHHHEEEEeCCcchhhcCccchh-hHHHHHHhh----------------------------------
Confidence 99999888777765 8999999 87777664311 111111100
Q ss_pred cccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHH
Q 014316 251 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 330 (427)
Q Consensus 251 ~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~ 330 (427)
...+.+. .+|+++||+.+.||+..++++++.+.+. .|+++|+|+|+|+..++
T Consensus 392 ~~l~~~~-~vIg~VgRl~~~Kg~~~LI~A~a~llk~---------------------------~pdirLvIVGdG~~~ee 443 (578)
T PRK15490 392 QKTQDAD-TTIGGVFRFVGDKNPFAWIDFAARYLQH---------------------------HPATRFVLVGDGDLRAE 443 (578)
T ss_pred hccCCCC-cEEEEEEEEehhcCHHHHHHHHHHHHhH---------------------------CCCeEEEEEeCchhHHH
Confidence 0122223 4889999999999999999999988776 68999999999999999
Q ss_pred HHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcE
Q 014316 331 YEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNG 409 (427)
Q Consensus 331 ~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G 409 (427)
++++++++++ ++|.|+|. .+++..+|+.+|++|+| |..|+||++++||||||+|||+|++||.+|+|.++.+|
T Consensus 444 Lk~la~elgL~d~V~FlG~---~~Dv~~~LaaADVfVlP---S~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG 517 (578)
T PRK15490 444 AQKRAEQLGILERILFVGA---SRDVGYWLQKMNVFILF---SRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSG 517 (578)
T ss_pred HHHHHHHcCCCCcEEECCC---hhhHHHHHHhCCEEEEc---ccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcE
Confidence 9999999999 58999998 78999999999999997 78899999999999999999999999999999999999
Q ss_pred EEe--CChHHHHHHH
Q 014316 410 LLF--SSSSELADQL 422 (427)
Q Consensus 410 ~l~--~~~~~la~~l 422 (427)
+++ +|++++++++
T Consensus 518 ~LVp~~D~~aLa~ai 532 (578)
T PRK15490 518 FILDDAQTVNLDQAC 532 (578)
T ss_pred EEECCCChhhHHHHH
Confidence 999 4555666554
No 43
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.97 E-value=6.2e-30 Score=251.94 Aligned_cols=218 Identities=13% Similarity=0.127 Sum_probs=174.2
Q ss_pred hhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHH
Q 014316 98 KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (427)
Q Consensus 98 ~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (427)
+..++|+||+|+.... .. +++..++|+|+++|+..+. .... ........+.++++|+..
T Consensus 84 ~~~~~Divh~~~~~~~---~~---~~~~~~~~~v~~~h~~~~~-------~~~~--------~~~~~~~~~~~~~~s~~~ 142 (335)
T cd03802 84 AAGDFDIVHNHSLHLP---LP---FARPLPVPVVTTLHGPPDP-------ELLK--------LYYAARPDVPFVSISDAQ 142 (335)
T ss_pred hcCCCCEEEecCcccc---hh---hhcccCCCEEEEecCCCCc-------ccch--------HHHhhCcCCeEEEecHHH
Confidence 3478999999983322 21 5667789999999988431 1110 122345688999999999
Q ss_pred HHHHHHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCC
Q 014316 178 QHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPN 256 (427)
Q Consensus 178 ~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (427)
++.+... .++.+|||| |.+.|.+.+ .
T Consensus 143 ~~~~~~~--~~~~vi~ngvd~~~~~~~~--------------------------------------------------~- 169 (335)
T cd03802 143 RRPWPPL--PWVATVHNGIDLDDYPFRG--------------------------------------------------P- 169 (335)
T ss_pred Hhhcccc--cccEEecCCcChhhCCCCC--------------------------------------------------C-
Confidence 9876543 558899999 766664321 1
Q ss_pred CCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHHH
Q 014316 257 RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIR 336 (427)
Q Consensus 257 ~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~~ 336 (427)
+...++|+||+.+.||++.++++++. .+++|+++|+|+..+.+...++
T Consensus 170 ~~~~i~~~Gr~~~~Kg~~~li~~~~~--------------------------------~~~~l~i~G~~~~~~~~~~~~~ 217 (335)
T cd03802 170 KGDYLLFLGRISPEKGPHLAIRAARR--------------------------------AGIPLKLAGPVSDPDYFYREIA 217 (335)
T ss_pred CCCEEEEEEeeccccCHHHHHHHHHh--------------------------------cCCeEEEEeCCCCHHHHHHHHH
Confidence 12379999999999999999998753 3689999999988877777766
Q ss_pred HcC-C-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCC-CCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEeC
Q 014316 337 RLR-L-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS 413 (427)
Q Consensus 337 ~l~-l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~-~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~~ 413 (427)
+.. + ++|.|+|. ++.+++.++++.+|++++| |. .|++|++++||||||+|||+|+.||..|++.++.+|++++
T Consensus 218 ~~~~~~~~v~~~G~-~~~~~~~~~~~~~d~~v~p---s~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~ 293 (335)
T cd03802 218 PELLDGPDIEYLGE-VGGAEKAELLGNARALLFP---ILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVD 293 (335)
T ss_pred HhcccCCcEEEeCC-CCHHHHHHHHHhCcEEEeC---CcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeC
Confidence 654 3 68999998 9999999999999999997 54 5999999999999999999999999999999999999998
Q ss_pred ChHHHHHHHHHh
Q 014316 414 SSSELADQLLVN 425 (427)
Q Consensus 414 ~~~~la~~l~~~ 425 (427)
+.++++++|..+
T Consensus 294 ~~~~l~~~l~~l 305 (335)
T cd03802 294 SVEELAAAVARA 305 (335)
T ss_pred CHHHHHHHHHHH
Confidence 899999999875
No 44
>PRK14098 glycogen synthase; Provisional
Probab=99.97 E-value=3.4e-29 Score=261.76 Aligned_cols=268 Identities=13% Similarity=0.107 Sum_probs=187.6
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhh-------cCCcEEEEecccchhhh----hh-hcCCCchHHHHH-----HHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSL-------RRSAFIVDWHNFGYTLL----SL-SLGRRSHFVSIY-----RWIEKY 162 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~-------~~~p~i~~~h~~~~~~~----~~-~~~~~~~~~~~~-----~~~e~~ 162 (427)
.+|||||+|+ +.+.++..+++.. .++|+|+|+|+..+.-. .. ..-....+.... ..+.+.
T Consensus 140 ~~pDiiH~hd---w~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~n~lk~ 216 (489)
T PRK14098 140 WKPDIIHCHD---WYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLLPEEVCSGLHREGDEVNMLYT 216 (489)
T ss_pred CCCCEEEecC---cHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhCCHHhhhhhhhcCCcccHHHH
Confidence 5899999998 5555555555432 38999999999754100 00 000000000000 123455
Q ss_pred HhccCCEEEEcCHHHHHHHHHh----hC---------CeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCcccc
Q 014316 163 YGKMANGCLCVTQAMQHELAQN----WG---------IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDC 228 (427)
Q Consensus 163 ~~~~ad~vi~vS~~~~~~l~~~----~~---------~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (427)
..+.||.|++||+..+++++.. +| .++.+|+|| |.+.|.|..... +..++..
T Consensus 217 ~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~---~~~~~~~----------- 282 (489)
T PRK14098 217 GVEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKL---IKKRYSI----------- 282 (489)
T ss_pred HHHhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCccccc---ccccCCc-----------
Confidence 6688999999999999988652 22 348999999 888887653110 0000000
Q ss_pred ccCCCCCCCccchhhhcccccccccCC-CCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhc
Q 014316 229 VSNGMEGQKADETIFTSLAGIDVFLKP-NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEIS 307 (427)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 307 (427)
. ..+....+ +..+++.++++. .+..+|+++||+.++||++.|++|+..+.+
T Consensus 283 -~-~~~~k~~~----k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~---------------------- 334 (489)
T PRK14098 283 -E-RLDGKLEN----KKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE---------------------- 334 (489)
T ss_pred -c-hhhhHHHH----HHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh----------------------
Confidence 0 00000000 001122234432 123489999999999999999999999864
Q ss_pred CCcccCCCCEEEEEEeCCCC--hHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHH
Q 014316 308 DGKQYLYPRLLFIITGKGPD--KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMF 385 (427)
Q Consensus 308 ~~~~~~~~~~~l~i~G~G~~--~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEam 385 (427)
++++|+|+|+|+. .+.+++++++++ ++|.|+|. ++.+++..+|++||++++| |..|+||++.+|||
T Consensus 335 -------~~~~lvivG~G~~~~~~~l~~l~~~~~-~~V~~~g~-~~~~~~~~~~a~aDi~l~P---S~~E~~Gl~~lEAm 402 (489)
T PRK14098 335 -------LDIQLVICGSGDKEYEKRFQDFAEEHP-EQVSVQTE-FTDAFFHLAIAGLDMLLMP---GKIESCGMLQMFAM 402 (489)
T ss_pred -------cCcEEEEEeCCCHHHHHHHHHHHHHCC-CCEEEEEe-cCHHHHHHHHHhCCEEEeC---CCCCCchHHHHHHH
Confidence 2699999999974 467888888874 58999998 8888999999999999998 88899999999999
Q ss_pred cCCCcEEEeccCccccceec----CCcEEEe--CChHHHHHHHHH
Q 014316 386 GCGLPVCAVSYSCIEELVKV----DKNGLLF--SSSSELADQLLV 424 (427)
Q Consensus 386 a~G~PVIas~~~g~~e~v~~----~~~G~l~--~~~~~la~~l~~ 424 (427)
+||+|+|++++||..|.+.+ +.+|+++ .|+++|+++|.+
T Consensus 403 a~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~ 447 (489)
T PRK14098 403 SYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGE 447 (489)
T ss_pred hCCCCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHH
Confidence 99999999999999998864 6799999 578999999875
No 45
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.97 E-value=2.1e-29 Score=247.27 Aligned_cols=246 Identities=24% Similarity=0.316 Sum_probs=197.8
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
..++|+||++.+ .....++.+.++..++|+++++|+..+.. . ......+..++...+.+|.++++|+.++
T Consensus 91 ~~~~dii~~~~~--~~~~~~~~~~~~~~~~~~i~~~h~~~~~~------~--~~~~~~~~~~~~~~~~~d~ii~~s~~~~ 160 (377)
T cd03798 91 RFRPDLIHAHFA--YPDGFAAALLKRKLGIPLVVTLHGSDVNL------L--PRKRLLRALLRRALRRADAVIAVSEALA 160 (377)
T ss_pred cCCCCEEEEecc--chHHHHHHHHHHhcCCCEEEEeecchhcc------c--CchhhHHHHHHHHHhcCCeEEeCCHHHH
Confidence 479999999963 33444466677777899999999884311 0 1111446667778889999999999999
Q ss_pred HHHHHh--hCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCC
Q 014316 179 HELAQN--WGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP 255 (427)
Q Consensus 179 ~~l~~~--~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (427)
+.+.+. ...++.+++|+ +...+.+...... + + ....
T Consensus 161 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~---~-------------------------------------~~~~ 199 (377)
T cd03798 161 DELKALGIDPEKVTVIPNGVDTERFSPADRAEA-R---K-------------------------------------LGLP 199 (377)
T ss_pred HHHHHhcCCCCceEEcCCCcCcccCCCcchHHH-H---h-------------------------------------ccCC
Confidence 999876 34458999999 6666654432111 0 0 0122
Q ss_pred CCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHH
Q 014316 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI 335 (427)
Q Consensus 256 ~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~ 335 (427)
++...++++|++.+.||++.++++++.+.+. .++++|+++|.|+..+.+++.+
T Consensus 200 ~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~---------------------------~~~~~l~i~g~~~~~~~~~~~~ 252 (377)
T cd03798 200 EDKKVILFVGRLVPRKGIDYLIEALARLLKK---------------------------RPDVHLVIVGDGPLREALEALA 252 (377)
T ss_pred CCceEEEEeccCccccCHHHHHHHHHHHHhc---------------------------CCCeEEEEEcCCcchHHHHHHH
Confidence 3346899999999999999999999998765 6789999999999888899999
Q ss_pred HHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe--
Q 014316 336 RRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF-- 412 (427)
Q Consensus 336 ~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~-- 412 (427)
+++++. +|.+.|. ++.+++..++++||++++| +..|++|.+++|||++|+|||+++.++..|++.++.+|+++
T Consensus 253 ~~~~~~~~v~~~g~-~~~~~~~~~~~~ad~~i~~---~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~ 328 (377)
T cd03798 253 AELGLEDRVTFLGA-VPHEEVPAYYAAADVFVLP---SLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPP 328 (377)
T ss_pred HhcCCcceEEEeCC-CCHHHHHHHHHhcCeeecc---hhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECC
Confidence 988885 8999997 9999999999999999997 66699999999999999999999999999999999999998
Q ss_pred CChHHHHHHHHHhc
Q 014316 413 SSSSELADQLLVNA 426 (427)
Q Consensus 413 ~~~~~la~~l~~~~ 426 (427)
+|+++++++|.++.
T Consensus 329 ~~~~~l~~~i~~~~ 342 (377)
T cd03798 329 GDPEALAEAILRLL 342 (377)
T ss_pred CCHHHHHHHHHHHh
Confidence 57899999998763
No 46
>PLN02939 transferase, transferring glycosyl groups
Probab=99.97 E-value=8.1e-29 Score=267.48 Aligned_cols=270 Identities=14% Similarity=0.134 Sum_probs=184.3
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHh------hcCCcEEEEecccchhhhh----hh-cCCC-chHH---H----HHHH--
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASS------LRRSAFIVDWHNFGYTLLS----LS-LGRR-SHFV---S----IYRW-- 158 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~------~~~~p~i~~~h~~~~~~~~----~~-~~~~-~~~~---~----~~~~-- 158 (427)
.+|||||+|+ +.+.+++.++.. +.++|+|+|+|+..|.-.. .. .+-. ..+. . ++..
T Consensus 609 ~~PDIIH~HD---W~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~d~le~~~~~~iN 685 (977)
T PLN02939 609 KKPDIIHCHD---WQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRPDRMQDNAHGRIN 685 (977)
T ss_pred CCCCEEEECC---ccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccChhhhhhccCCchH
Confidence 6899999999 444443222211 3568999999999763210 00 0000 0000 0 0000
Q ss_pred HHHHHhccCCEEEEcCHHHHHHHHHhhC-----------CeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCcc
Q 014316 159 IEKYYGKMANGCLCVTQAMQHELAQNWG-----------IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQ 226 (427)
Q Consensus 159 ~e~~~~~~ad~vi~vS~~~~~~l~~~~~-----------~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (427)
+-+....+||.|+|||...++++...+| .++.+|+|| |.+.|.|..... +..++.
T Consensus 686 ~LK~GIv~AD~VtTVSptYA~EI~te~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~---L~~~Ys---------- 752 (977)
T PLN02939 686 VVKGAIVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRF---LKVQYN---------- 752 (977)
T ss_pred HHHHHHHhCCeeEeeeHHHHHHHHHHhccchHHHhccccCCceEEecceehhhcCCccccc---cccccC----------
Confidence 1122233699999999999999876433 137899999 888887653110 000000
Q ss_pred ccccCCCCCCCccchhhhcccccccccCCC--CCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhh
Q 014316 227 DCVSNGMEGQKADETIFTSLAGIDVFLKPN--RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLK 304 (427)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~ 304 (427)
+. ...+...+. ..++++++++.+ ...+|+++||+.++||++.|++|+..+.+
T Consensus 753 --~~-dl~GK~~nK----~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~------------------- 806 (977)
T PLN02939 753 --AN-DLQGKAANK----AALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE------------------- 806 (977)
T ss_pred --hh-hhhhhhhhh----HHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh-------------------
Confidence 00 000000001 113334455532 23489999999999999999999988753
Q ss_pred hhcCCcccCCCCEEEEEEeCCCCh---HHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchH
Q 014316 305 EISDGKQYLYPRLLFIITGKGPDK---ESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMK 380 (427)
Q Consensus 305 ~~~~~~~~~~~~~~l~i~G~G~~~---~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~ 380 (427)
++++|+|+|+|++. +.+++++++++.. +|.|+|. .+......+|++||++|+| |..|+||++
T Consensus 807 ----------~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~-~de~lah~IYAaADIFLmP---Sr~EPfGLv 872 (977)
T PLN02939 807 ----------LGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILK-YDEALSHSIYAASDMFIIP---SMFEPCGLT 872 (977)
T ss_pred ----------cCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEec-cCHHHHHHHHHhCCEEEEC---CCccCCcHH
Confidence 36899999999863 5678888888874 7999997 6666678999999999998 888999999
Q ss_pred HHHHHcCCCcEEEeccCccccceec---------CCcEEEe--CChHHHHHHHHHh
Q 014316 381 VVDMFGCGLPVCAVSYSCIEELVKV---------DKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 381 ~lEama~G~PVIas~~~g~~e~v~~---------~~~G~l~--~~~~~la~~l~~~ 425 (427)
++|||+||+|+|++++||+.|+|.+ +.+|+++ .|+++|+++|.++
T Consensus 873 qLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rA 928 (977)
T PLN02939 873 QMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERA 928 (977)
T ss_pred HHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHH
Confidence 9999999999999999999999975 5789999 5788999888754
No 47
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.97 E-value=7.3e-30 Score=266.37 Aligned_cols=244 Identities=19% Similarity=0.253 Sum_probs=193.2
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhh-hhc-------C-CCchHHHHHHHHHHHHhccCCE
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLS-LSL-------G-RRSHFVSIYRWIEKYYGKMANG 169 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~-~~~-------~-~~~~~~~~~~~~e~~~~~~ad~ 169 (427)
..++|++|+|++. .+.+++.++++..++|+|+|.|+. |+... ... . .+..+.++++++++.+++.||.
T Consensus 171 ~~~~dviH~~s~~--~~g~~~~~~~~~~~~p~I~t~Hg~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ad~ 247 (475)
T cd03813 171 LPKADVYHAVSTG--YAGLLGALAKARRGTPFLLTEHGI-YTRERKIELLQADWEMSYFRRLWIRFFESLGRLAYQAADR 247 (475)
T ss_pred CCCCCEEeccCcc--hHHHHHHHHHHHhCCCEEEecCCc-cHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhCCE
Confidence 4689999999743 233446777888899999999997 42110 000 0 1122344567788899999999
Q ss_pred EEEcCHHHHHHHHHhhCCe---EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhc
Q 014316 170 CLCVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTS 245 (427)
Q Consensus 170 vi~vS~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (427)
|+++|+..++...+ +|.+ +.+|||| +.+.|.+....
T Consensus 248 Ii~~s~~~~~~~~~-~g~~~~ki~vIpNgid~~~f~~~~~~--------------------------------------- 287 (475)
T cd03813 248 ITTLYEGNRERQIE-DGADPEKIRVIPNGIDPERFAPARRA--------------------------------------- 287 (475)
T ss_pred EEecCHHHHHHHHH-cCCCHHHeEEeCCCcCHHHcCCcccc---------------------------------------
Confidence 99999999887654 4553 8999999 76666543210
Q ss_pred ccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCC
Q 014316 246 LAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG 325 (427)
Q Consensus 246 ~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G 325 (427)
....++..|+|+||+.+.||++.+++|++.+.+. .|+++|+|+|+|
T Consensus 288 -------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~---------------------------~p~~~l~IvG~g 333 (475)
T cd03813 288 -------RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKK---------------------------IPDAEGWVIGPT 333 (475)
T ss_pred -------ccCCCCcEEEEEeccccccCHHHHHHHHHHHHHh---------------------------CCCeEEEEECCC
Confidence 0122345899999999999999999999999876 789999999998
Q ss_pred CC----hHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccc
Q 014316 326 PD----KESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIE 400 (427)
Q Consensus 326 ~~----~~~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~ 400 (427)
+. .++++++++++++ ++|.|+| .+++.++|+++|++|+| |..|++|++++||||||+|||+|++|+++
T Consensus 334 ~~~~~~~~e~~~li~~l~l~~~V~f~G----~~~v~~~l~~aDv~vlp---S~~Eg~p~~vlEAma~G~PVVatd~g~~~ 406 (475)
T cd03813 334 DEDPEYAEECRELVESLGLEDNVKFTG----FQNVKEYLPKLDVLVLT---SISEGQPLVILEAMAAGIPVVATDVGSCR 406 (475)
T ss_pred CcChHHHHHHHHHHHHhCCCCeEEEcC----CccHHHHHHhCCEEEeC---chhhcCChHHHHHHHcCCCEEECCCCChH
Confidence 53 3456788889998 5899998 67899999999999997 77799999999999999999999999999
Q ss_pred cceec------CCcEEEe--CChHHHHHHHHHhc
Q 014316 401 ELVKV------DKNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 401 e~v~~------~~~G~l~--~~~~~la~~l~~~~ 426 (427)
|++.+ |.+|+++ +|++++|++|.++.
T Consensus 407 elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll 440 (475)
T cd03813 407 ELIEGADDEALGPAGEVVPPADPEALARAILRLL 440 (475)
T ss_pred HHhcCCcccccCCceEEECCCCHHHHHHHHHHHh
Confidence 99988 5699999 67899999998764
No 48
>PLN02949 transferase, transferring glycosyl groups
Probab=99.97 E-value=3.2e-29 Score=259.73 Aligned_cols=197 Identities=20% Similarity=0.315 Sum_probs=157.9
Q ss_pred HHHHHHHHhccCCEEEEcCHHHHHHHHHhhCCe--EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCC
Q 014316 156 YRWIEKYYGKMANGCLCVTQAMQHELAQNWGIK--ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNG 232 (427)
Q Consensus 156 ~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~--~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (427)
+.+++++..+.||.++|+|+.+++.+.+.|+.+ +.++||+ +.+.+...+.
T Consensus 210 ~~~l~~~~~~~ad~ii~nS~~t~~~l~~~~~~~~~i~vvyp~vd~~~~~~~~~--------------------------- 262 (463)
T PLN02949 210 FAWMYGLVGRCAHLAMVNSSWTKSHIEALWRIPERIKRVYPPCDTSGLQALPL--------------------------- 262 (463)
T ss_pred HHHHHHHHcCCCCEEEECCHHHHHHHHHHcCCCCCeEEEcCCCCHHHcccCCc---------------------------
Confidence 344677778999999999999999998877653 7889987 4333321110
Q ss_pred CCCCCccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCccc
Q 014316 233 MEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQY 312 (427)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (427)
....+ ...++++||+.++||++.+|+|++.+.++...
T Consensus 263 -------------------~~~~~-~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~----------------------- 299 (463)
T PLN02949 263 -------------------ERSED-PPYIISVAQFRPEKAHALQLEAFALALEKLDA----------------------- 299 (463)
T ss_pred -------------------cccCC-CCEEEEEEeeeccCCHHHHHHHHHHHHHhccc-----------------------
Confidence 00112 23799999999999999999999988753100
Q ss_pred CCCCEEEEEEeCCCCh------HHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHH
Q 014316 313 LYPRLLFIITGKGPDK------ESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMF 385 (427)
Q Consensus 313 ~~~~~~l~i~G~G~~~------~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEam 385 (427)
..|+++|+|+|+|+.. +++++++++++++ +|+|+|. ++.+++.++|+.||+++.| |..|+||++++|||
T Consensus 300 ~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~V~f~g~-v~~~el~~ll~~a~~~v~~---s~~E~FGivvlEAM 375 (463)
T PLN02949 300 DVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGDVEFHKN-VSYRDLVRLLGGAVAGLHS---MIDEHFGISVVEYM 375 (463)
T ss_pred cCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCcEEEeCC-CCHHHHHHHHHhCcEEEeC---CccCCCChHHHHHH
Confidence 1468999999998532 4678889999995 7999998 9999999999999999975 77899999999999
Q ss_pred cCCCcEEEeccCccc-cceec---CCcEEEeCChHHHHHHHHHhc
Q 014316 386 GCGLPVCAVSYSCIE-ELVKV---DKNGLLFSSSSELADQLLVNA 426 (427)
Q Consensus 386 a~G~PVIas~~~g~~-e~v~~---~~~G~l~~~~~~la~~l~~~~ 426 (427)
|||+|||+++.||.. |++.+ +.+|++++|++++|++|.++.
T Consensus 376 A~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~~~~~la~ai~~ll 420 (463)
T PLN02949 376 AAGAVPIAHNSAGPKMDIVLDEDGQQTGFLATTVEEYADAILEVL 420 (463)
T ss_pred HcCCcEEEeCCCCCcceeeecCCCCcccccCCCHHHHHHHHHHHH
Confidence 999999999998864 77765 678999999999999998764
No 49
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.97 E-value=8e-29 Score=241.26 Aligned_cols=297 Identities=22% Similarity=0.263 Sum_probs=209.4
Q ss_pred CCChhH-HHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHH
Q 014316 16 GRSPRM-QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWF 94 (427)
Q Consensus 16 ~~~~r~-~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (427)
|+..+. ...+..|++. ||+|++++..... ........++.+..++. ...............+.+.+
T Consensus 13 gG~~~~~~~l~~~L~~~-g~~v~v~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l--------- 79 (348)
T cd03820 13 GGAERVLSNLANALAEK-GHEVTIISLDKGE-PPFYELDPKIKVIDLGD--KRDSKLLARFKKLRRLRKLL--------- 79 (348)
T ss_pred CChHHHHHHHHHHHHhC-CCeEEEEecCCCC-CCccccCCccceeeccc--ccccchhccccchHHHHHhh---------
Confidence 454443 3455677765 9999999977654 12222344677777662 11111111111222222222
Q ss_pred HHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcC-CcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEc
Q 014316 95 LCVKIASPDVFLVQNPPSVPTLVAVKWASSLRR-SAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCV 173 (427)
Q Consensus 95 ~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~-~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~v 173 (427)
+..+||+|+++.+. ....+.....+ +|++++.|+.... ... .......++.+.+.+|.++++
T Consensus 80 ---~~~~~d~i~~~~~~-----~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~--~~~~~~~~~~~~~~~d~ii~~ 142 (348)
T cd03820 80 ---KNNKPDVVISFLTS-----LLTFLASLGLKIVKLIVSEHNSPDA-------YKK--RLRRLLLRRLLYRRADAVVVL 142 (348)
T ss_pred ---cccCCCEEEEcCch-----HHHHHHHHhhccccEEEecCCCccc-------hhh--hhHHHHHHHHHHhcCCEEEEe
Confidence 23799999999854 11222333344 4999999987321 111 111122578888999999999
Q ss_pred CHHHHHHHHHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccc
Q 014316 174 TQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVF 252 (427)
Q Consensus 174 S~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (427)
|+.++.......+.++.+++|+ +...+.+.
T Consensus 143 s~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~------------------------------------------------- 173 (348)
T cd03820 143 TEEDRALYYKKFNKNVVVIPNPLPFPPEEPS------------------------------------------------- 173 (348)
T ss_pred CHHHHHHhhccCCCCeEEecCCcChhhcccc-------------------------------------------------
Confidence 9999733333334458999998 43332111
Q ss_pred cCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHH
Q 014316 253 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 332 (427)
Q Consensus 253 ~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~ 332 (427)
..++...++++|++.+.||++.+++|++.+.+. .|+++|.++|+|++.+.++
T Consensus 174 -~~~~~~~i~~~g~~~~~K~~~~l~~~~~~l~~~---------------------------~~~~~l~i~G~~~~~~~~~ 225 (348)
T cd03820 174 -SDLKSKRILAVGRLVPQKGFDLLIEAWAKIAKK---------------------------HPDWKLRIVGDGPEREALE 225 (348)
T ss_pred -CCCCCcEEEEEEeeccccCHHHHHHHHHHHHhc---------------------------CCCeEEEEEeCCCCHHHHH
Confidence 012234899999999999999999999999765 7899999999999999999
Q ss_pred HHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC-ccccceecCCcEE
Q 014316 333 EKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS-CIEELVKVDKNGL 410 (427)
Q Consensus 333 ~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~-g~~e~v~~~~~G~ 410 (427)
+.++++++. +|.|.|. .+++..+|++||++++| |..|++|++++|||+||+|||+++.+ +..+++.++.+|+
T Consensus 226 ~~~~~~~~~~~v~~~g~---~~~~~~~~~~ad~~i~p---s~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~ 299 (348)
T cd03820 226 ALIKELGLEDRVILLGF---TKNIEEYYAKASIFVLT---SRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGL 299 (348)
T ss_pred HHHHHcCCCCeEEEcCC---cchHHHHHHhCCEEEeC---ccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceE
Confidence 999999885 7999997 89999999999999997 66799999999999999999999964 5677777777999
Q ss_pred Ee--CChHHHHHHHHHh
Q 014316 411 LF--SSSSELADQLLVN 425 (427)
Q Consensus 411 l~--~~~~~la~~l~~~ 425 (427)
++ .|+++++++|.++
T Consensus 300 ~~~~~~~~~~~~~i~~l 316 (348)
T cd03820 300 LVPNGDVEALAEALLRL 316 (348)
T ss_pred EeCCCCHHHHHHHHHHH
Confidence 99 4569999999876
No 50
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.97 E-value=2.2e-28 Score=242.05 Aligned_cols=243 Identities=19% Similarity=0.193 Sum_probs=179.0
Q ss_pred CCCcEEEEcCCCChhHHHHHHHH---HhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcC-H
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWA---SSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVT-Q 175 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~---~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS-~ 175 (427)
.+||+||++.............+ ....++|+|+++|+... .... ....++++.+.+.+|.++|+| +
T Consensus 75 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~-------~~~~---~~~~~~~~~~~~~~d~ii~~s~~ 144 (366)
T cd03822 75 SGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLL-------HEPR---PGDRALLRLLLRRADAVIVMSSE 144 (366)
T ss_pred cCCCEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCc-------cccc---hhhhHHHHHHHhcCCEEEEeeHH
Confidence 79999999863222111111222 23478999999999711 0111 123456677788999999996 4
Q ss_pred HHHHHHHHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccC
Q 014316 176 AMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (427)
Q Consensus 176 ~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (427)
..++.+...+..++.+++|+ +...+.+... ..+ ...
T Consensus 145 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~-----------------------------------------~~~ 181 (366)
T cd03822 145 LLRALLLRAYPEKIAVIPHGVPDPPAEPPES--LKA-----------------------------------------LGG 181 (366)
T ss_pred HHHHHHhhcCCCcEEEeCCCCcCcccCCchh--hHh-----------------------------------------hcC
Confidence 44444443323568999999 5444433211 000 111
Q ss_pred CCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHH-
Q 014316 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE- 333 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~- 333 (427)
..+...++|+|++.+.||++.+++|++.+.++ .++++|+++|+|+.......
T Consensus 182 ~~~~~~i~~~G~~~~~K~~~~ll~a~~~~~~~---------------------------~~~~~l~i~G~~~~~~~~~~~ 234 (366)
T cd03822 182 LDGRPVLLTFGLLRPYKGLELLLEALPLLVAK---------------------------HPDVRLLVAGETHPDLERYRG 234 (366)
T ss_pred CCCCeEEEEEeeccCCCCHHHHHHHHHHHHhh---------------------------CCCeEEEEeccCccchhhhhh
Confidence 22345899999999999999999999999876 68999999999865443322
Q ss_pred ----HHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCC--CCchHHHHHHcCCCcEEEeccCccccceecC
Q 014316 334 ----KIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGL--DLPMKVVDMFGCGLPVCAVSYSCIEELVKVD 406 (427)
Q Consensus 334 ----~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e--~~p~~~lEama~G~PVIas~~~g~~e~v~~~ 406 (427)
+++++++. +|.|.|.|++.+++.++|+.||++++| |..| ++|++++||||||+|||+|+.|+ .+.+.++
T Consensus 235 ~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~~~~ad~~v~p---s~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~ 310 (366)
T cd03822 235 EAYALAERLGLADRVIFINRYLPDEELPELFSAADVVVLP---YRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDG 310 (366)
T ss_pred hhHhHHHhcCCCCcEEEecCcCCHHHHHHHHhhcCEEEec---ccccccccchHHHHHHHcCCCEEecCCCC-hheeeeC
Confidence 37888885 899999889999999999999999997 6677 99999999999999999999999 7778889
Q ss_pred CcEEEe--CChHHHHHHHHHhc
Q 014316 407 KNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 407 ~~G~l~--~~~~~la~~l~~~~ 426 (427)
.+|+++ +|.++++++|..+.
T Consensus 311 ~~g~~~~~~d~~~~~~~l~~l~ 332 (366)
T cd03822 311 GTGLLVPPGDPAALAEAIRRLL 332 (366)
T ss_pred CCcEEEcCCCHHHHHHHHHHHH
Confidence 999999 56899999998764
No 51
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.97 E-value=3e-28 Score=254.41 Aligned_cols=244 Identities=12% Similarity=0.075 Sum_probs=179.1
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHH-HHHHHHHHHhcc-CCEEEEcCHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVS-IYRWIEKYYGKM-ANGCLCVTQAM 177 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~-~~~~~e~~~~~~-ad~vi~vS~~~ 177 (427)
.+|||||+++|..+...-.+..+++..+ |+|.++|.- |..+....+ ...... +.+++.+++.+. ||.|+++|..+
T Consensus 433 f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTn-y~eYl~~y~-~g~L~~~llk~l~~~v~r~hcD~VIaPS~at 509 (794)
T PLN02501 433 KDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTN-YLEYIKREK-NGALQAFFVKHINNWVTRAYCHKVLRLSAAT 509 (794)
T ss_pred cCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCC-cHHHHhHhc-chhHHHHHHHHHHHHHHHhhCCEEEcCCHHH
Confidence 7999999999765433211444555566 888888866 433322221 122222 223444444432 89999999888
Q ss_pred HHHHHHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCC
Q 014316 178 QHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPN 256 (427)
Q Consensus 178 ~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (427)
++ +. .......|| |.++|.|....... .++ +....
T Consensus 510 q~-L~----~~vI~nVnGVDte~F~P~~r~~~~---r~l------------------------------------gi~~~ 545 (794)
T PLN02501 510 QD-LP----KSVICNVHGVNPKFLKIGEKVAEE---REL------------------------------------GQQAF 545 (794)
T ss_pred HH-hc----ccceeecccccccccCCcchhHHH---Hhc------------------------------------CCccc
Confidence 83 32 121111258 88888876421111 111 11111
Q ss_pred CCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHHH
Q 014316 257 RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIR 336 (427)
Q Consensus 257 ~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~~ 336 (427)
+..++|+||+.++||++.|++|++.+.+. .|+++|+|+|+||+.++++++++
T Consensus 546 -~kgiLfVGRLa~EKGld~LLeAla~L~~~---------------------------~pnvrLvIVGDGP~reeLe~la~ 597 (794)
T PLN02501 546 -SKGAYFLGKMVWAKGYRELIDLLAKHKNE---------------------------LDGFNLDVFGNGEDAHEVQRAAK 597 (794)
T ss_pred -cCceEEEEcccccCCHHHHHHHHHHHHhh---------------------------CCCeEEEEEcCCccHHHHHHHHH
Confidence 12488999999999999999999998765 68899999999999999999999
Q ss_pred HcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEeCChH
Q 014316 337 RLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSS 416 (427)
Q Consensus 337 ~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~~~~~ 416 (427)
++++ +|.|+|. .++...+|+.+|++|+| |..|+||++++||||||+|||+++++|. +++.++.+|++++|.+
T Consensus 598 eLgL-~V~FLG~---~dd~~~lyasaDVFVlP---S~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~~D~E 669 (794)
T PLN02501 598 RLDL-NLNFLKG---RDHADDSLHGYKVFINP---SISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTYKTSE 669 (794)
T ss_pred HcCC-EEEecCC---CCCHHHHHHhCCEEEEC---CCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEecCCHH
Confidence 9887 5999998 78888999999999998 8889999999999999999999999985 4577889999999999
Q ss_pred HHHHHHHHhc
Q 014316 417 ELADQLLVNA 426 (427)
Q Consensus 417 ~la~~l~~~~ 426 (427)
+++++|.++.
T Consensus 670 afAeAI~~LL 679 (794)
T PLN02501 670 DFVAKVKEAL 679 (794)
T ss_pred HHHHHHHHHH
Confidence 9999988753
No 52
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.97 E-value=1.9e-28 Score=241.50 Aligned_cols=251 Identities=20% Similarity=0.233 Sum_probs=187.6
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHH-H-HHHHHHHHhccCCEEEEcCHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVS-I-YRWIEKYYGKMANGCLCVTQA 176 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~-~-~~~~e~~~~~~ad~vi~vS~~ 176 (427)
..++|+||+|++....... +...++..++|++++.|+... .... ....+.+ + ..+.++...+.++.+++.|+.
T Consensus 85 ~~~~dii~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~ 159 (375)
T cd03821 85 IREADIVHVHGLWSYPSLA-AARAARKYGIPYVVSPHGMLD-PWAL---PHKALKKRLAWFLFERRLLQAAAAVHATSEQ 159 (375)
T ss_pred CCCCCEEEEecccchHHHH-HHHHHHHhCCCEEEEcccccc-cccc---ccchhhhHHHHHHHHHHHHhcCCEEEECCHH
Confidence 4789999999865544444 444555678999999998732 1110 1112211 1 234567777889999999987
Q ss_pred HHHHHHHhh-CCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccC
Q 014316 177 MQHELAQNW-GIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (427)
Q Consensus 177 ~~~~l~~~~-~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (427)
......... ..++.++||+ +.+.|.+...... +. ....
T Consensus 160 ~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~---~~------------------------------------~~~~- 199 (375)
T cd03821 160 EAAEIRRLGLKAPIAVIPNGVDIPPFAALPSRGR---RR------------------------------------KFPI- 199 (375)
T ss_pred HHHHHHhhCCcccEEEcCCCcChhccCcchhhhh---hh------------------------------------hccC-
Confidence 777665432 3348999999 6666654321110 00 0122
Q ss_pred CCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCC--hHHHH
Q 014316 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KESYE 332 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~--~~~~~ 332 (427)
.++...++|+|++.+.||++.+++|+..+.++ .++++|+++|.|+. ...++
T Consensus 200 ~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~---------------------------~~~~~l~i~G~~~~~~~~~~~ 252 (375)
T cd03821 200 LPDKRIILFLGRLHPKKGLDLLIEAFAKLAER---------------------------FPDWHLVIAGPDEGGYRAELK 252 (375)
T ss_pred CCCCcEEEEEeCcchhcCHHHHHHHHHHhhhh---------------------------cCCeEEEEECCCCcchHHHHH
Confidence 23345899999999999999999999999876 78999999998753 34455
Q ss_pred HHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEE
Q 014316 333 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLL 411 (427)
Q Consensus 333 ~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l 411 (427)
.+++++++ ++|.|+|. ++.+++..+|+.||++++| |..|++|++++|||+||+|||+|+.+|..|++.+ ..|++
T Consensus 253 ~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~adv~v~p---s~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~ 327 (375)
T cd03821 253 QIAAALGLEDRVTFTGM-LYGEDKAAALADADLFVLP---SHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWV 327 (375)
T ss_pred HHHHhcCccceEEEcCC-CChHHHHHHHhhCCEEEec---cccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEE
Confidence 55678888 48999997 9999999999999999997 7779999999999999999999999999999988 88999
Q ss_pred e-CChHHHHHHHHHhc
Q 014316 412 F-SSSSELADQLLVNA 426 (427)
Q Consensus 412 ~-~~~~~la~~l~~~~ 426 (427)
+ ++.++++++|.++.
T Consensus 328 ~~~~~~~~~~~i~~l~ 343 (375)
T cd03821 328 VDDDVDALAAALRRAL 343 (375)
T ss_pred eCCChHHHHHHHHHHH
Confidence 8 45599999988763
No 53
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.97 E-value=1.8e-28 Score=250.84 Aligned_cols=319 Identities=11% Similarity=0.066 Sum_probs=199.6
Q ss_pred cceEEEEEeCCCCCChhHHH-HHHHHHhhCCCcEEEEecCCCCCcccccCCCce-EEEEeecCCCCCCCCcchhhHH---
Q 014316 4 RGRACVVVLGDLGRSPRMQY-QALSLARQMSLEVDVVAYGGSKPHAAILEHPSI-HIHTMTQWPTIPRGLPKVLKPV--- 78 (427)
Q Consensus 4 ~~~~~v~~~~~~~~~~r~~~-~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i-~v~~~~~~~~~~~~~~~~~~~~--- 78 (427)
||.+.|.+....|+.+++.. .+..+.++ ||+|+++...+..+.... ...++ ..+.+. +. +.......
T Consensus 1 mkil~i~~~l~~GGaeri~~~L~~~l~~~-G~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~--~~----~~~~~~~~~~~ 72 (405)
T PRK10125 1 MNILQFNVRLAEGGAAGVALDLHQRALQQ-GLASHFVYGYGKGGKESV-SHQNYPQVIKHT--PR----MTAMANIALFR 72 (405)
T ss_pred CeEEEEEeeecCCchhHHHHHHHHHHHhc-CCeEEEEEecCCCccccc-ccCCcceEEEec--cc----HHHHHHHHHHH
Confidence 56778888888899898654 45666665 999999987654322211 11122 222222 11 10010000
Q ss_pred ---HHHHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCCh--hHHHHHHH----HHhhcCCcEEEEecccchhhh-------
Q 014316 79 ---LLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSV--PTLVAVKW----ASSLRRSAFIVDWHNFGYTLL------- 142 (427)
Q Consensus 79 ---~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~--~~~~~~~~----~~~~~~~p~i~~~h~~~~~~~------- 142 (427)
+..+..+..+. .++.+..+|||||+|+-... ....+..+ ..+..++|+|+|.||. |...
T Consensus 73 ~~~~~~~~~~~~~~----~~i~~~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~piV~TlHd~-~~~tg~c~~~~ 147 (405)
T PRK10125 73 LFNRDLFGNFNELY----RTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDH-WSVTGRCAFTD 147 (405)
T ss_pred hcchhhcchHHHHH----HHHhhccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCCEEEecccc-cccCCCcCCCc
Confidence 00011111111 11213479999999984321 11111111 1234578999999998 5332
Q ss_pred ---hhhcC----------CC---chHHHHH---HHHHHHHhccCCEEEEcCHHHHHHHHHhhCC-eEEEecCC-CCCCcC
Q 014316 143 ---SLSLG----------RR---SHFVSIY---RWIEKYYGKMANGCLCVTQAMQHELAQNWGI-KATVLYDQ-PPEFFH 201 (427)
Q Consensus 143 ---~~~~~----------~~---~~~~~~~---~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~-~~~vi~n~-~~~~f~ 201 (427)
....+ .. ....+.+ +..-+.+.+.++.+|++|+..++.+.+.++. ++.+|||| |.+.+.
T Consensus 148 ~C~~~~~~c~~Cp~l~~~~~~~~d~~~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~~~~~~i~vI~NGid~~~~~ 227 (405)
T PRK10125 148 GCEGWKTGCQKCPTLNNYPPVKVDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNGIDMATEA 227 (405)
T ss_pred ccccccccCCCCCCccCCCCCccchHHHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHHcCCCCEEEeCCCcCccccc
Confidence 00000 00 0011111 2222233346789999999999988776664 48999999 653322
Q ss_pred CCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCeEEEEEeec--CCCCCHHHHHHH
Q 014316 202 PTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSW--TPDEDFGILLEA 279 (427)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~--~~~K~~~~Li~a 279 (427)
..+.. .. . ..++++ .+|+++|+. .+.||++.|++|
T Consensus 228 ~~~~~--~~------------------------------------~----~~~~~~-~~il~v~~~~~~~~Kg~~~li~A 264 (405)
T PRK10125 228 ILAEL--PP------------------------------------V----RETQGK-PKIAVVAHDLRYDGKTDQQLVRE 264 (405)
T ss_pred ccccc--cc------------------------------------c----ccCCCC-CEEEEEEeccccCCccHHHHHHH
Confidence 21100 00 0 011223 478999984 367999999999
Q ss_pred HHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHH
Q 014316 280 ALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLL 359 (427)
Q Consensus 280 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l 359 (427)
++.+ .++++|+|+|+|+... .++|.++|..-+.+++.++|
T Consensus 265 ~~~l------------------------------~~~~~L~ivG~g~~~~----------~~~v~~~g~~~~~~~l~~~y 304 (405)
T PRK10125 265 MMAL------------------------------GDKIELHTFGKFSPFT----------AGNVVNHGFETDKRKLMSAL 304 (405)
T ss_pred HHhC------------------------------CCCeEEEEEcCCCccc----------ccceEEecCcCCHHHHHHHH
Confidence 9875 2469999999986321 13688888733578899999
Q ss_pred hcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe--CChHHHHHHH
Q 014316 360 GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQL 422 (427)
Q Consensus 360 ~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~--~~~~~la~~l 422 (427)
++||++|+| |..|+||++++||||||+|||+|++||++|++.++ +|+++ +|+++||+.+
T Consensus 305 ~~aDvfV~p---S~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G~lv~~~d~~~La~~~ 365 (405)
T PRK10125 305 NQMDALVFS---SRVDNYPLILCEALSIGVPVIATHSDAAREVLQKS-GGKTVSEEEVLQLAQLS 365 (405)
T ss_pred HhCCEEEEC---CccccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cEEEECCCCHHHHHhcc
Confidence 999999997 88899999999999999999999999999999765 89999 6788998754
No 54
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.97 E-value=5.4e-29 Score=248.67 Aligned_cols=230 Identities=17% Similarity=0.200 Sum_probs=176.6
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccc---hhh---hhhhcCCC-----chHHHHHHHHHHHHhccC
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFG---YTL---LSLSLGRR-----SHFVSIYRWIEKYYGKMA 167 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~---~~~---~~~~~~~~-----~~~~~~~~~~e~~~~~~a 167 (427)
..++|+|+++++. . +..+....+.|.+.++|... |.. .....+.. ......++.+++...+++
T Consensus 81 ~~~~D~v~~~~~~---~---~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (351)
T cd03804 81 LSGYDLVISSSHA---V---AKGVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARV 154 (351)
T ss_pred ccCCCEEEEcCcH---H---hccccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCC
Confidence 3789999988721 1 11122456788899988641 111 11111111 112344566777788999
Q ss_pred CEEEEcCHHHHHHHHHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcc
Q 014316 168 NGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSL 246 (427)
Q Consensus 168 d~vi~vS~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (427)
|.++++|+.+++.+.+.++.+..+++|+ +.+.|.+..
T Consensus 155 d~ii~~S~~~~~~~~~~~~~~~~vi~~~~d~~~~~~~~------------------------------------------ 192 (351)
T cd03804 155 DYFIANSRFVARRIKKYYGRDATVIYPPVDTDRFTPAE------------------------------------------ 192 (351)
T ss_pred CEEEECCHHHHHHHHHHhCCCcEEECCCCCHhhcCcCC------------------------------------------
Confidence 9999999999999988788788899998 544443211
Q ss_pred cccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCC
Q 014316 247 AGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP 326 (427)
Q Consensus 247 ~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~ 326 (427)
... ..++|+|++.+.||++.+++|++.+ + ++|+|+|+|+
T Consensus 193 --------~~~-~~il~~G~~~~~K~~~~li~a~~~~-------------------------------~-~~l~ivG~g~ 231 (351)
T cd03804 193 --------EKE-DYYLSVGRLVPYKRIDLAIEAFNKL-------------------------------G-KRLVVIGDGP 231 (351)
T ss_pred --------CCC-CEEEEEEcCccccChHHHHHHHHHC-------------------------------C-CcEEEEECCh
Confidence 112 3689999999999999999999763 4 7899999998
Q ss_pred ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecC
Q 014316 327 DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD 406 (427)
Q Consensus 327 ~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~ 406 (427)
..+++++ ...++|+|+|. ++.+++.++|++||++++| |. |++|++++||||||+|||+++.||..|++.++
T Consensus 232 ~~~~l~~----~~~~~V~~~g~-~~~~~~~~~~~~ad~~v~p---s~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~ 302 (351)
T cd03804 232 ELDRLRA----KAGPNVTFLGR-VSDEELRDLYARARAFLFP---AE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDG 302 (351)
T ss_pred hHHHHHh----hcCCCEEEecC-CCHHHHHHHHHhCCEEEEC---Cc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCC
Confidence 7766665 22368999998 9999999999999999997 66 99999999999999999999999999999999
Q ss_pred CcEEEe--CChHHHHHHHHHhc
Q 014316 407 KNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 407 ~~G~l~--~~~~~la~~l~~~~ 426 (427)
.+|+++ +|++++|++|.++.
T Consensus 303 ~~G~~~~~~~~~~la~~i~~l~ 324 (351)
T cd03804 303 VTGILFEEQTVESLAAAVERFE 324 (351)
T ss_pred CCEEEeCCCCHHHHHHHHHHHH
Confidence 999999 57899999998764
No 55
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.97 E-value=1.2e-28 Score=248.85 Aligned_cols=241 Identities=16% Similarity=0.172 Sum_probs=173.1
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
..+||+||+|++.. .. ...+.+..++|+|+++|.... ... ....+++ +...+.+|.+++.|...
T Consensus 83 ~~~~Dvv~~h~~~~---~~-~~~~~~~~~~~~i~~~H~~~~--------~~~--~~~~~~~-~~~~~~~d~~i~~~~~~- 146 (372)
T cd03792 83 DLDADVVVIHDPQP---LA-LPLFKKKRGRPWIWRCHIDLS--------SPN--RRVWDFL-QPYIEDYDAAVFHLPEY- 146 (372)
T ss_pred cCCCCEEEECCCCc---hh-HHHhhhcCCCeEEEEeeeecC--------CCc--HHHHHHH-HHHHHhCCEEeecHHHh-
Confidence 36899999998642 11 222233348999999997621 111 1222333 44557799999888322
Q ss_pred HHHHHhhCCeEEEecCC-CCCC-cC-CCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCC
Q 014316 179 HELAQNWGIKATVLYDQ-PPEF-FH-PTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP 255 (427)
Q Consensus 179 ~~l~~~~~~~~~vi~n~-~~~~-f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (427)
....+..+..++||+ |... +. +...+....++.+ ++..+
T Consensus 147 --~~~~~~~~~~vipngvd~~~~~~~~~~~~~~~~~~~~------------------------------------~~~~~ 188 (372)
T cd03792 147 --VPPQVPPRKVIIPPSIDPLSGKNRELSPADIEYILEK------------------------------------YGIDP 188 (372)
T ss_pred --cCCCCCCceEEeCCCCCCCccccCCCCHHHHHHHHHH------------------------------------hCCCC
Confidence 222223234499999 6432 21 2222222232222 23344
Q ss_pred CCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh-----HH
Q 014316 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-----ES 330 (427)
Q Consensus 256 ~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~-----~~ 330 (427)
+++ +|+++||+.+.||++.|++|++.+.+. .|+++|+++|+|+.. +.
T Consensus 189 ~~~-~i~~vgrl~~~Kg~~~ll~a~~~l~~~---------------------------~~~~~l~i~G~g~~~~~~~~~~ 240 (372)
T cd03792 189 ERP-YITQVSRFDPWKDPFGVIDAYRKVKER---------------------------VPDPQLVLVGSGATDDPEGWIV 240 (372)
T ss_pred CCc-EEEEEeccccccCcHHHHHHHHHHHhh---------------------------CCCCEEEEEeCCCCCCchhHHH
Confidence 444 899999999999999999999998775 688999999999753 23
Q ss_pred HHHHHHHcCC-CcEEEecCCC--CcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCC
Q 014316 331 YEEKIRRLRL-KRVAFRTMWL--SAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDK 407 (427)
Q Consensus 331 ~~~~~~~l~l-~~V~f~g~~~--~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~ 407 (427)
++++.+..++ ++|.|+|. . +.+++..+|++||++++| |..|+||++++||||||+|||+|+.+|..+++.++.
T Consensus 241 ~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~ad~~v~~---s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~ 316 (372)
T cd03792 241 YEEVLEYAEGDPDIHVLTL-PPVSDLEVNALQRASTVVLQK---SIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGE 316 (372)
T ss_pred HHHHHHHhCCCCCeEEEec-CCCCHHHHHHHHHhCeEEEeC---CCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCC
Confidence 4555555666 47999997 4 789999999999999987 788999999999999999999999999999999999
Q ss_pred cEEEeCChHHHHHHHHHh
Q 014316 408 NGLLFSSSSELADQLLVN 425 (427)
Q Consensus 408 ~G~l~~~~~~la~~l~~~ 425 (427)
+|+++++.++++++|.++
T Consensus 317 ~g~~~~~~~~~a~~i~~l 334 (372)
T cd03792 317 TGFLVDTVEEAAVRILYL 334 (372)
T ss_pred ceEEeCCcHHHHHHHHHH
Confidence 999998888999888765
No 56
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.97 E-value=3.9e-28 Score=238.94 Aligned_cols=305 Identities=19% Similarity=0.198 Sum_probs=202.4
Q ss_pred CCChh-HHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHH
Q 014316 16 GRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWF 94 (427)
Q Consensus 16 ~~~~r-~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (427)
|+.++ ....+.+|+++ ||+|++++.......... ...+........+................... ......+..
T Consensus 15 gG~~~~~~~l~~~L~~~-g~~v~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 90 (359)
T cd03823 15 GGAEVVAHDLAEALAKR-GHEVAVLTAGEDPPRQDK-EVIGVVVYGRPIDEVLRSALPRDLFHLSDYDN--PAVVAEFAR 90 (359)
T ss_pred cchHHHHHHHHHHHHhc-CCceEEEeCCCCCCCccc-ccccceeeccccccccCCCchhhhhHHHhccC--HHHHHHHHH
Confidence 44445 34567888875 999999997654422221 12233333321000001111111100000000 000011111
Q ss_pred HHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcC
Q 014316 95 LCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVT 174 (427)
Q Consensus 95 ~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 174 (427)
+.+..+||+||++++.... ......++..++|+++++|+..+ . ... .....+..|.++++|
T Consensus 91 -~~~~~~~dii~~~~~~~~~--~~~~~~~~~~~~~~i~~~hd~~~-~--------~~~-------~~~~~~~~d~ii~~s 151 (359)
T cd03823 91 -LLEDFRPDVVHFHHLQGLG--VSILRAARDRGIPIVLTLHDYWL-I--------CPR-------QGLFKKGGDAVIAPS 151 (359)
T ss_pred -HHHHcCCCEEEECCccchH--HHHHHHHHhcCCCEEEEEeeeee-e--------cch-------hhhhccCCCEEEEeC
Confidence 1234799999999853222 22334455668999999999832 1 000 011112349999999
Q ss_pred HHHHHHHHHhhC--CeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccccc
Q 014316 175 QAMQHELAQNWG--IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDV 251 (427)
Q Consensus 175 ~~~~~~l~~~~~--~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (427)
+.+++.+.+.+. .++.+++|+ +...+.+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~vi~n~~~~~~~~~~~----------------------------------------------- 184 (359)
T cd03823 152 RFLLDRYVANGLFAEKISVIRNGIDLDRAKRPR----------------------------------------------- 184 (359)
T ss_pred HHHHHHHHHcCCCccceEEecCCcChhhccccc-----------------------------------------------
Confidence 999999877644 358999998 554443221
Q ss_pred ccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHH
Q 014316 252 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 331 (427)
Q Consensus 252 ~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~ 331 (427)
...++++..++|+|++.+.||++.++++++.+.+ ++++|+++|.|+.....
T Consensus 185 ~~~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~-----------------------------~~~~l~i~G~~~~~~~~ 235 (359)
T cd03823 185 RAPPGGRLRFGFIGQLTPHKGVDLLLEAFKRLPR-----------------------------GDIELVIVGNGLELEEE 235 (359)
T ss_pred cCCCCCceEEEEEecCccccCHHHHHHHHHHHHh-----------------------------cCcEEEEEcCchhhhHH
Confidence 0012334689999999999999999999998753 47999999999866554
Q ss_pred HHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCC-CCCCchHHHHHHcCCCcEEEeccCccccceecCCcE
Q 014316 332 EEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNG 409 (427)
Q Consensus 332 ~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~-~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G 409 (427)
.... +. ++|.|+|. ++.+++.++|+.||++++| |. .|++|++++|||+||+|||+|+.++..|++.++.+|
T Consensus 236 ~~~~---~~~~~v~~~g~-~~~~~~~~~~~~ad~~i~p---s~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g 308 (359)
T cd03823 236 SYEL---EGDPRVEFLGA-YPQEEIDDFYAEIDVLVVP---SIWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNG 308 (359)
T ss_pred HHhh---cCCCeEEEeCC-CCHHHHHHHHHhCCEEEEc---CcccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcE
Confidence 4333 33 58999998 8999999999999999997 65 699999999999999999999999999999999999
Q ss_pred EEe--CChHHHHHHHHHhc
Q 014316 410 LLF--SSSSELADQLLVNA 426 (427)
Q Consensus 410 ~l~--~~~~~la~~l~~~~ 426 (427)
+++ +|.++++++|.++.
T Consensus 309 ~~~~~~d~~~l~~~i~~l~ 327 (359)
T cd03823 309 LLFPPGDAEDLAAALERLI 327 (359)
T ss_pred EEECCCCHHHHHHHHHHHH
Confidence 999 55799999988763
No 57
>PLN00142 sucrose synthase
Probab=99.97 E-value=3e-28 Score=261.82 Aligned_cols=336 Identities=13% Similarity=0.069 Sum_probs=213.6
Q ss_pred HHHHhhCCCcEE----EEecCCCCC--------cccccCCCceEEEEeecCCCCC-CCCcchh-h--HHHHHHHHHHHHH
Q 014316 26 LSLARQMSLEVD----VVAYGGSKP--------HAAILEHPSIHIHTMTQWPTIP-RGLPKVL-K--PVLLLLKPLIQFF 89 (427)
Q Consensus 26 ~~La~~~g~~V~----vi~~~~~~~--------~~~~~~~~~i~v~~~~~~~~~~-~~~~~~~-~--~~~~~~~~~~~~~ 89 (427)
..|+++ ||+|+ |+|-..... .+.+...++.++.++| ..+. ..++++. + .+.++-.+...
T Consensus 322 ~~l~~~-G~~v~~~v~i~TR~i~~~~~~~~~~~~e~v~~~~~~~I~rvP--~g~~~~~l~~~i~ke~l~p~L~~f~~~-- 396 (815)
T PLN00142 322 LRIKQQ-GLDIKPQILIVTRLIPDAKGTTCNQRLEKVSGTEHSHILRVP--FRTEKGILRKWISRFDVWPYLETFAED-- 396 (815)
T ss_pred HHHHhc-CCCccceeEEEEeccCCccCCcccCcceeccCCCceEEEecC--CCCCccccccccCHHHHHHHHHHHHHH--
Confidence 455564 99874 888432111 1233334589999999 4332 1121111 1 11111111211
Q ss_pred HHHHHHHh-hhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCC---CchHHHHH--HHHHHHH
Q 014316 90 MLLWFLCV-KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGR---RSHFVSIY--RWIEKYY 163 (427)
Q Consensus 90 ~~~~~~~~-~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~---~~~~~~~~--~~~e~~~ 163 (427)
+...+.. ...+||+||+|. ..+.+++.+++...|+|++.|.|.++-.-...+... ......+. ...|..+
T Consensus 397 -~~~~~~~~~~~~PDlIHaHY---wdsg~vA~~La~~lgVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~~~~r~~aE~~a 472 (815)
T PLN00142 397 -AASEILAELQGKPDLIIGNY---SDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDDKYHFSCQFTADLIA 472 (815)
T ss_pred -HHHHHHHhcCCCCCEEEECC---ccHHHHHHHHHHHhCCCEEEEcccchhhhccccCCcccccchhhhhhhchHHHHHH
Confidence 1111111 224699999997 777788999999999999999997742111110000 01111111 2347788
Q ss_pred hccCCEEEEcCHHHHHHHH-------Hh------------hCC-----eEEEecCC-CCCCcCCCChHH-HHH-HHhhhh
Q 014316 164 GKMANGCLCVTQAMQHELA-------QN------------WGI-----KATVLYDQ-PPEFFHPTSLEE-KHE-LFCRLN 216 (427)
Q Consensus 164 ~~~ad~vi~vS~~~~~~l~-------~~------------~~~-----~~~vi~n~-~~~~f~~~~~~~-~~~-~~~~~~ 216 (427)
...||.||+.|......+. .. -|+ ++.+|++| |...|.|..... +.. +...+
T Consensus 473 ~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I- 551 (815)
T PLN00142 473 MNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSI- 551 (815)
T ss_pred HHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccc-
Confidence 8899999999987764221 10 011 36889999 877777654321 111 00000
Q ss_pred hcccCCCCccccccCCCCCCCccchhhhcc-ccccccc--CCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhcc
Q 014316 217 KILHQPLGVQDCVSNGMEGQKADETIFTSL-AGIDVFL--KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNE 293 (427)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~ 293 (427)
+...|... .++.++. .++++ +|+++||+.+.||++.|++|++.+.+.
T Consensus 552 ----------------------~~~l~~~~~~~e~lg~l~~~~kp-vIl~VGRL~~~KGid~LIeA~a~l~~l------- 601 (815)
T PLN00142 552 ----------------------EELLYSPEQNDEHIGYLKDRKKP-IIFSMARLDRVKNLTGLVEWYGKNKRL------- 601 (815)
T ss_pred ----------------------hhhcCChHHHHHHhCCccCCCCc-EEEEEecCcccCCHHHHHHHHHHHHHh-------
Confidence 00000000 0011122 23344 899999999999999999999988764
Q ss_pred CCCchhhhhhhhhcCCcccCCCCEEEEEEeCCC------Ch------HHHHHHHHHcCCC-cEEEecCC---CCcccHHH
Q 014316 294 DDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP------DK------ESYEEKIRRLRLK-RVAFRTMW---LSAEDYPL 357 (427)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~------~~------~~~~~~~~~l~l~-~V~f~g~~---~~~~~~~~ 357 (427)
.++++|+|+|+|. +. ..+.++++++++. +|.|+|.. .+.+++..
T Consensus 602 --------------------~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr 661 (815)
T PLN00142 602 --------------------RELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYR 661 (815)
T ss_pred --------------------CCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHH
Confidence 5689999999872 11 2356788899995 79999861 22345666
Q ss_pred HHh-cCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe--CChHHHHHHHHH
Q 014316 358 LLG-SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLV 424 (427)
Q Consensus 358 ~l~-~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~ 424 (427)
+++ ++|++|+| |..|+||++++||||||+|||+|++||+.|+|.++.+|+++ .|++++|++|.+
T Consensus 662 ~iadaaDVfVlP---S~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~ 728 (815)
T PLN00142 662 YIADTKGAFVQP---ALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIAD 728 (815)
T ss_pred HHHhhCCEEEeC---CcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHH
Confidence 666 57999997 88899999999999999999999999999999999999999 578999999865
No 58
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.97 E-value=5.7e-28 Score=239.00 Aligned_cols=242 Identities=22% Similarity=0.237 Sum_probs=184.9
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
.++|++|++++..... +..++|+++++|+..+..... . ........++.+++.+.+.+|.++++|+.+++
T Consensus 84 ~~~Dii~~~~~~~~~~--------~~~~~~~i~~~hd~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~ 153 (365)
T cd03809 84 LGLDLLHSPHNTAPLL--------RLRGVPVVVTIHDLIPLRFPE-Y-FSPGFRRYFRRLLRRALRRADAIITVSEATKR 153 (365)
T ss_pred cCCCeeeecccccCcc--------cCCCCCEEEEeccchhhhCcc-c-CCHHHHHHHHHHHHHHHHHcCEEEEccHHHHH
Confidence 7899999998432211 567999999999984321111 1 11122456677888888999999999999999
Q ss_pred HHHHhhCC---eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCC
Q 014316 180 ELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP 255 (427)
Q Consensus 180 ~l~~~~~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (427)
.+.+.++. ++.+++|+ +...+.+.....+.. ....
T Consensus 154 ~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~-----------------------------------------~~~~ 192 (365)
T cd03809 154 DLLRYLGVPPDKIVVIPLGVDPRFRPPPAEAEVLR-----------------------------------------ALYL 192 (365)
T ss_pred HHHHHhCcCHHHEEeeccccCccccCCCchHHHHH-----------------------------------------HhcC
Confidence 99888763 38999999 655554432111000 0112
Q ss_pred CCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh-HHHHHH
Q 014316 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESYEEK 334 (427)
Q Consensus 256 ~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~-~~~~~~ 334 (427)
.++..|+|+|++.+.||++.+++++..+.+. .++++|+++|.++.. +...+.
T Consensus 193 ~~~~~i~~~G~~~~~K~~~~~l~~~~~~~~~---------------------------~~~~~l~i~G~~~~~~~~~~~~ 245 (365)
T cd03809 193 LPRPYFLYVGTIEPRKNLERLLEAFARLPAK---------------------------GPDPKLVIVGKRGWLNEELLAR 245 (365)
T ss_pred CCCCeEEEeCCCccccCHHHHHHHHHHHHHh---------------------------cCCCCEEEecCCccccHHHHHH
Confidence 2335899999999999999999999999876 567999999986543 333444
Q ss_pred HHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe-
Q 014316 335 IRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF- 412 (427)
Q Consensus 335 ~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~- 412 (427)
+++++. ++|.|+|. ++.+++.++++.||++++| |..|++|++++|||++|+|||+++.|+..|++. ++|+++
T Consensus 246 ~~~~~~~~~v~~~g~-~~~~~~~~~~~~~d~~l~p---s~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~ 319 (365)
T cd03809 246 LRELGLGDRVRFLGY-VSDEELAALYRGARAFVFP---SLYEGFGLPVLEAMACGTPVIASNISSLPEVAG--DAALYFD 319 (365)
T ss_pred HHHcCCCCeEEECCC-CChhHHHHHHhhhhhhccc---chhccCCCCHHHHhcCCCcEEecCCCCccceec--CceeeeC
Confidence 456676 48999997 9999999999999999987 677999999999999999999999999999984 457776
Q ss_pred -CChHHHHHHHHHh
Q 014316 413 -SSSSELADQLLVN 425 (427)
Q Consensus 413 -~~~~~la~~l~~~ 425 (427)
+|.++++++|.++
T Consensus 320 ~~~~~~~~~~i~~l 333 (365)
T cd03809 320 PLDPEALAAAIERL 333 (365)
T ss_pred CCCHHHHHHHHHHH
Confidence 6789999999875
No 59
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=99.97 E-value=1.9e-29 Score=242.37 Aligned_cols=308 Identities=16% Similarity=0.185 Sum_probs=219.7
Q ss_pred ChhHHHHHHHHHhh---CCCcEEEEecCCCCCcccccCCCceEEEEeecCCC-CCCCCcchhhHHHHHHHHHHHHHHHHH
Q 014316 18 SPRMQYQALSLARQ---MSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPT-IPRGLPKVLKPVLLLLKPLIQFFMLLW 93 (427)
Q Consensus 18 ~~r~~~~a~~La~~---~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (427)
.+++..|...|++. .||.|.++|-..+....-.....|++++++|-... ....+......+..+...+.+
T Consensus 14 ~ggveshiy~lSq~li~lghkVvvithayg~r~girylt~glkVyylp~~v~~n~tT~ptv~~~~Pllr~i~lr------ 87 (426)
T KOG1111|consen 14 TGGVESHIYALSQCLIRLGHKVVVITHAYGNRVGIRYLTNGLKVYYLPAVVGYNQTTFPTVFSDFPLLRPILLR------ 87 (426)
T ss_pred CCChhhhHHHhhcchhhcCCeEEEEeccccCccceeeecCCceEEEEeeeeeecccchhhhhccCcccchhhhh------
Confidence 34555555555554 69999999955433222112233799999983211 001111111111112222222
Q ss_pred HHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchH-HHHHHHHHHHHhccCCEEEE
Q 014316 94 FLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHF-VSIYRWIEKYYGKMANGCLC 172 (427)
Q Consensus 94 ~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~ad~vi~ 172 (427)
++..+||.|++.+..+-= +.+.++..|.+.|+|=|.+ |-+ ..+ ......+-++.....|.+||
T Consensus 88 ------E~I~ivhghs~fS~lahe-~l~hartMGlktVfTdHSl-fGf--------ad~~si~~n~ll~~sL~~id~~Ic 151 (426)
T KOG1111|consen 88 ------ERIEIVHGHSPFSYLAHE-ALMHARTMGLKTVFTDHSL-FGF--------ADIGSILTNKLLPLSLANIDRIIC 151 (426)
T ss_pred ------hceEEEecCChHHHHHHH-HHHHHHhcCceEEEecccc-ccc--------cchhhhhhcceeeeeecCCCcEEE
Confidence 689999999965443322 5667888899999999987 411 111 11122334455668899999
Q ss_pred cCHHHHHHHHHhhCC---eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccc
Q 014316 173 VTQAMQHELAQNWGI---KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAG 248 (427)
Q Consensus 173 vS~~~~~~l~~~~~~---~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (427)
||...++...-+... ++.+|||. +.+.|.|.+..
T Consensus 152 Vshtskentvlr~~L~p~kvsvIPnAv~~~~f~P~~~~------------------------------------------ 189 (426)
T KOG1111|consen 152 VSHTSKENTVLRGALAPAKVSVIPNAVVTHTFTPDAAD------------------------------------------ 189 (426)
T ss_pred EeecCCCceEEEeccCHhHeeeccceeeccccccCccc------------------------------------------
Confidence 999888764322222 28999999 88888775411
Q ss_pred cccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh
Q 014316 249 IDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 328 (427)
Q Consensus 249 ~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~ 328 (427)
-++++...++.++|+...||+|.|++++.++.++ +|+++|+|+||||..
T Consensus 190 ----~~S~~i~~ivv~sRLvyrKGiDll~~iIp~vc~~---------------------------~p~vrfii~GDGPk~ 238 (426)
T KOG1111|consen 190 ----KPSADIITIVVASRLVYRKGIDLLLEIIPSVCDK---------------------------HPEVRFIIIGDGPKR 238 (426)
T ss_pred ----cCCCCeeEEEEEeeeeeccchHHHHHHHHHHHhc---------------------------CCCeeEEEecCCccc
Confidence 1122335799999999999999999999999987 899999999999999
Q ss_pred HHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCC
Q 014316 329 ESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDK 407 (427)
Q Consensus 329 ~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~ 407 (427)
..+|+..+++.++ +|.++|. ++.+++.+.|.+.|+|+.| |..|.|+++++|||+||+|||+|++||++|++.++
T Consensus 239 i~lee~lEk~~l~~rV~~lG~-v~h~~Vr~vl~~G~IFlnt---SlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d- 313 (426)
T KOG1111|consen 239 IDLEEMLEKLFLQDRVVMLGT-VPHDRVRDVLVRGDIFLNT---SLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED- 313 (426)
T ss_pred chHHHHHHHhhccCceEEecc-cchHHHHHHHhcCcEEecc---HHHHHHHHHHHHHHhCCCEEEEeecCCccccCCcc-
Confidence 9999999999885 8999999 9999999999999999997 88999999999999999999999999999999765
Q ss_pred cEEEe-CChHHHHHHHHHh
Q 014316 408 NGLLF-SSSSELADQLLVN 425 (427)
Q Consensus 408 ~G~l~-~~~~~la~~l~~~ 425 (427)
.=++. .+++++++++++.
T Consensus 314 ~i~~~~~~~~dl~~~v~~a 332 (426)
T KOG1111|consen 314 MITLGEPGPDDLVGAVEKA 332 (426)
T ss_pred ceeccCCChHHHHHHHHHH
Confidence 22233 4467787777653
No 60
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.96 E-value=2.7e-27 Score=242.43 Aligned_cols=237 Identities=19% Similarity=0.226 Sum_probs=181.8
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCc-EEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSA-FIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p-~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
.++|++|++. .......+.++....+.+ +|.+.|++.. ... .....+..+.+.+.+.+|.++++|+..+
T Consensus 126 ~~~~v~~sy~--~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~--~~~------~~~~~~~~~~~~~~~~~d~ii~~S~~~~ 195 (407)
T cd04946 126 GQGTVFYSYW--LHETAYALALLKKEYLRKRVISRAHGYDL--YED------RYPSGYIPLRRYLLSSLDAVFPCSEQGR 195 (407)
T ss_pred cCceEEEEec--CchHHHHHHHHHHhcCCceEEEEeccchh--hhh------hccccchHHHHHHHhcCCEEEECCHHHH
Confidence 4567777765 223333334444444554 8999997632 110 0011123345566788999999999999
Q ss_pred HHHHHhhCCe---EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccC
Q 014316 179 HELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (427)
Q Consensus 179 ~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (427)
+.+.+.++.. +.+++|| +...+.+.. .
T Consensus 196 ~~l~~~~~~~~~ki~vi~~gv~~~~~~~~~-------------------------------------------------~ 226 (407)
T cd04946 196 NYLQKRYPAYKEKIKVSYLGVSDPGIISKP-------------------------------------------------S 226 (407)
T ss_pred HHHHHHCCCccccEEEEECCcccccccCCC-------------------------------------------------C
Confidence 9998887653 7889998 433332110 1
Q ss_pred CCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCC--CEEEEEEeCCCChHHHH
Q 014316 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP--RLLFIITGKGPDKESYE 332 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~i~G~G~~~~~~~ 332 (427)
.++++.|+++|++.+.||++.+++|+..+.+. .| +++++++|+|+..+.++
T Consensus 227 ~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~---------------------------~p~~~l~~~iiG~g~~~~~l~ 279 (407)
T cd04946 227 KDDTLRIVSCSYLVPVKRVDLIIKALAALAKA---------------------------RPSIKIKWTHIGGGPLEDTLK 279 (407)
T ss_pred CCCCEEEEEeeccccccCHHHHHHHHHHHHHh---------------------------CCCceEEEEEEeCchHHHHHH
Confidence 12346899999999999999999999999875 44 57789999999999999
Q ss_pred HHHHHcCCC-cEEEecCCCCcccHHHHHhc--CcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcE
Q 014316 333 EKIRRLRLK-RVAFRTMWLSAEDYPLLLGS--ADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNG 409 (427)
Q Consensus 333 ~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~--adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G 409 (427)
+++++++.. +|.|+|. ++.+++.++|+. +|++++| |..|++|++++||||||+|||+|++||.+|++.++.+|
T Consensus 280 ~~~~~~~~~~~V~f~G~-v~~~e~~~~~~~~~~~v~v~~---S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G 355 (407)
T cd04946 280 ELAESKPENISVNFTGE-LSNSEVYKLYKENPVDVFVNL---SESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNG 355 (407)
T ss_pred HHHHhcCCCceEEEecC-CChHHHHHHHhhcCCCEEEeC---CccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcE
Confidence 999887774 7999997 999999999986 6778876 78899999999999999999999999999999999999
Q ss_pred EEeC---ChHHHHHHHHHhc
Q 014316 410 LLFS---SSSELADQLLVNA 426 (427)
Q Consensus 410 ~l~~---~~~~la~~l~~~~ 426 (427)
+++. |+++++++|.++.
T Consensus 356 ~l~~~~~~~~~la~~I~~ll 375 (407)
T cd04946 356 LLLSKDPTPNELVSSLSKFI 375 (407)
T ss_pred EEeCCCCCHHHHHHHHHHHH
Confidence 9983 5799999998764
No 61
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.96 E-value=2.5e-27 Score=241.46 Aligned_cols=239 Identities=16% Similarity=0.156 Sum_probs=170.6
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHH-hhcCCcEEEEecccchhhhhhhcC----CCchHH----HHHHHHHHHHhccCCE
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWAS-SLRRSAFIVDWHNFGYTLLSLSLG----RRSHFV----SIYRWIEKYYGKMANG 169 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~-~~~~~p~i~~~h~~~~~~~~~~~~----~~~~~~----~~~~~~e~~~~~~ad~ 169 (427)
..++|+||++++.. +.++. ...++|+|++.||.....+..... ..+.+. +...++|+.+++.+|.
T Consensus 102 ~~~~D~v~~~~~~~------~~~~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ 175 (397)
T TIGR03087 102 AEPVDAIVVFSSAM------AQYVTPHVRGVPRIVDFVDVDSDKWLQYARTKRWPLRWIYRREGRLLLAYERAIAARFDA 175 (397)
T ss_pred hCCCCEEEEecccc------ceeccccccCCCeEeehhhHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHHhhCCe
Confidence 37899999997321 22232 356899999999863222111110 011111 2345689999999999
Q ss_pred EEEcCHHHHHHHHHhhC---CeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhc
Q 014316 170 CLCVTQAMQHELAQNWG---IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTS 245 (427)
Q Consensus 170 vi~vS~~~~~~l~~~~~---~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (427)
++++|+..++.+.+.++ .++.+|||| |.+.|.+.... . .
T Consensus 176 vi~~S~~~~~~l~~~~~~~~~~v~vipngvd~~~f~~~~~~---~------------------------------~---- 218 (397)
T TIGR03087 176 ATFVSRAEAELFRRLAPEAAGRITAFPNGVDADFFSPDRDY---P------------------------------N---- 218 (397)
T ss_pred EEEcCHHHHHHHHHhCCCCCCCeEEeecccchhhcCCCccc---c------------------------------C----
Confidence 99999999999876543 248899999 77777543210 0 0
Q ss_pred ccccccccCCCCCeEEEEEeecCCCCCHHHHHH----HHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEE
Q 014316 246 LAGIDVFLKPNRPALVVSSTSWTPDEDFGILLE----AALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII 321 (427)
Q Consensus 246 ~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~----a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 321 (427)
....+. ..++|+|++.+.||++.++. ++..+.+. .|+++|+|
T Consensus 219 ------~~~~~~-~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~---------------------------~p~~~l~i 264 (397)
T TIGR03087 219 ------PYPPGK-RVLVFTGAMDYWPNIDAVVWFAERVFPAVRAR---------------------------RPAAEFYI 264 (397)
T ss_pred ------CCCCCC-cEEEEEEecCCccCHHHHHHHHHHHHHHHHHH---------------------------CCCcEEEE
Confidence 111222 48999999999999999884 44555544 78999999
Q ss_pred EeCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCC-CCCCchHHHHHHcCCCcEEEeccCcc
Q 014316 322 TGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-GLDLPMKVVDMFGCGLPVCAVSYSCI 399 (427)
Q Consensus 322 ~G~G~~~~~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~-~e~~p~~~lEama~G~PVIas~~~g~ 399 (427)
+|+|+.. .+ ++++. ++|+|+|. + +++..+|+.||++|+| |. .||+|++++||||||+|||+|+.++
T Consensus 265 vG~g~~~-~~----~~l~~~~~V~~~G~-v--~~~~~~~~~adv~v~P---s~~~eG~~~~~lEAma~G~PVV~t~~~~- 332 (397)
T TIGR03087 265 VGAKPSP-AV----RALAALPGVTVTGS-V--ADVRPYLAHAAVAVAP---LRIARGIQNKVLEAMAMAKPVVASPEAA- 332 (397)
T ss_pred ECCCChH-HH----HHhccCCCeEEeee-c--CCHHHHHHhCCEEEec---ccccCCcccHHHHHHHcCCCEEecCccc-
Confidence 9999853 23 33333 47999998 4 5899999999999997 43 5899999999999999999999754
Q ss_pred ccceecCCcEEEe-CChHHHHHHHHHhc
Q 014316 400 EELVKVDKNGLLF-SSSSELADQLLVNA 426 (427)
Q Consensus 400 ~e~v~~~~~G~l~-~~~~~la~~l~~~~ 426 (427)
..+..++++|+++ +|++++|++|.++.
T Consensus 333 ~~i~~~~~~g~lv~~~~~~la~ai~~ll 360 (397)
T TIGR03087 333 EGIDALPGAELLVAADPADFAAAILALL 360 (397)
T ss_pred ccccccCCcceEeCCCHHHHHHHHHHHH
Confidence 2334456678888 78999999998753
No 62
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.96 E-value=4.1e-27 Score=246.22 Aligned_cols=237 Identities=13% Similarity=0.210 Sum_probs=179.3
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCch-HHHHHHHHHHHHhccCCEEEEcCHHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSH-FVSIYRWIEKYYGKMANGCLCVTQAM 177 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (427)
..++||+|++.+.... ..++.....+|.++++|+-.+.... ...... +...+....+ ..+.+|++|++|+..
T Consensus 209 ~~~~di~i~dr~~~~~----~~~~~~~~~~~~v~~lH~~h~~~~~--~~~~~~~~~~~y~~~~~-~~~~~D~iI~~S~~~ 281 (500)
T TIGR02918 209 LTKKDIIILDRSTGIG----QAVLENKGPAKLGVVVHAEHFSESA--TNETYILWNNYYEYQFS-NADYIDFFITATDIQ 281 (500)
T ss_pred CCCCCEEEEcCCcccc----hHHHhcCCCceEEEEEChhhhcCcc--CcchhHHHHHHHHHHHh-chhhCCEEEECCHHH
Confidence 3689999998854321 1233445688999999976431110 011111 1222222212 245789999999999
Q ss_pred HHHHHHhhC------CeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccc
Q 014316 178 QHELAQNWG------IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGID 250 (427)
Q Consensus 178 ~~~l~~~~~------~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (427)
++.+.+.++ .++.+|||| +...+.+.
T Consensus 282 ~~~l~~~~~~~~~~~~ki~viP~g~~~~~~~~~----------------------------------------------- 314 (500)
T TIGR02918 282 NQILKNQFKKYYNIEPRIYTIPVGSLDELQYPE----------------------------------------------- 314 (500)
T ss_pred HHHHHHHhhhhcCCCCcEEEEcCCCcccccCcc-----------------------------------------------
Confidence 988876553 237899998 32222110
Q ss_pred cccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHH
Q 014316 251 VFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 330 (427)
Q Consensus 251 ~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~ 330 (427)
...++..|+++||+.+.||++.|++|++.+.+. .|+++|.|+|+|+..+.
T Consensus 315 ---~~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~---------------------------~p~~~l~i~G~G~~~~~ 364 (500)
T TIGR02918 315 ---QERKPFSIITASRLAKEKHIDWLVKAVVKAKKS---------------------------VPELTFDIYGEGGEKQK 364 (500)
T ss_pred ---cccCCeEEEEEeccccccCHHHHHHHHHHHHhh---------------------------CCCeEEEEEECchhHHH
Confidence 011235899999999999999999999999876 89999999999999999
Q ss_pred HHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC-ccccceecCCc
Q 014316 331 YEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS-CIEELVKVDKN 408 (427)
Q Consensus 331 ~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~-g~~e~v~~~~~ 408 (427)
+++++++++++ +|.|+|. . ++.++|+.||++|+| |..|+||++++||||||+|||+|+++ |.+|+|.+|.+
T Consensus 365 l~~~i~~~~l~~~V~f~G~-~---~~~~~~~~adv~v~p---S~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~n 437 (500)
T TIGR02918 365 LQKIINENQAQDYIHLKGH-R---NLSEVYKDYELYLSA---STSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKN 437 (500)
T ss_pred HHHHHHHcCCCCeEEEcCC-C---CHHHHHHhCCEEEEc---CccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCC
Confidence 99999999985 7999995 3 688999999999997 78899999999999999999999986 89999999999
Q ss_pred EEEeC-C---------hHHHHHHHHHhc
Q 014316 409 GLLFS-S---------SSELADQLLVNA 426 (427)
Q Consensus 409 G~l~~-~---------~~~la~~l~~~~ 426 (427)
|++++ + +++||++|..+.
T Consensus 438 G~lv~~~~~~~d~~~~~~~la~~I~~ll 465 (500)
T TIGR02918 438 GYLIPIDEEEDDEDQIITALAEKIVEYF 465 (500)
T ss_pred EEEEeCCccccchhHHHHHHHHHHHHHh
Confidence 99995 1 788999987653
No 63
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.95 E-value=2.2e-26 Score=228.86 Aligned_cols=248 Identities=17% Similarity=0.181 Sum_probs=173.8
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhh-cCCcEEEEecccchhhhhhhc------------------CCC--chHHHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSL------------------GRR--SHFVSIYRW 158 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~-~~~p~i~~~h~~~~~~~~~~~------------------~~~--~~~~~~~~~ 158 (427)
.++|+||+|++...... ...+.+. +++|+|+++|+.......... ... .......++
T Consensus 50 ~~~diih~~~~~~~~~~--~~~~~~~~~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (365)
T cd03825 50 INADIVHLHWIHGGFLS--IEDLSKLLDRKPVVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRR 127 (365)
T ss_pred ccCCEEEEEccccCccC--HHHHHHHHcCCCEEEEcccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHH
Confidence 78999999984332211 1222222 599999999987321100000 000 111223333
Q ss_pred HHHHHhccCCEEEEcCHHHHHHHHHhhC---CeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCC
Q 014316 159 IEKYYGKMANGCLCVTQAMQHELAQNWG---IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGME 234 (427)
Q Consensus 159 ~e~~~~~~ad~vi~vS~~~~~~l~~~~~---~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (427)
..+.+...++.++++|+..++.+.+.+. .++.++||+ +.+.|.+.......+ .
T Consensus 128 ~~~~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~~~~~~~---~-------------------- 184 (365)
T cd03825 128 KRKAWADLNLTIVAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFRPRDKREARK---R-------------------- 184 (365)
T ss_pred HHHHhccCCcEEEehhHHHHHHHHhccccCCCceEEeCCCCcccccCCCcHHHHHH---H--------------------
Confidence 3334445688999999999998877653 348999999 766665543211111 1
Q ss_pred CCCccchhhhcccccccccCCCCCeEEEEEeecCC--CCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCccc
Q 014316 235 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTP--DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQY 312 (427)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~--~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (427)
...+.++ .++++.|+... .||++.+++|++.+.++
T Consensus 185 ----------------~~~~~~~-~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~-------------------------- 221 (365)
T cd03825 185 ----------------LGLPADK-KIILFGAVGGTDPRKGFDELIEALKRLAER-------------------------- 221 (365)
T ss_pred ----------------hCCCCCC-eEEEEEecCCCccccCHHHHHHHHHHhhhc--------------------------
Confidence 1223333 35666666654 89999999999988752
Q ss_pred CCCCEEEEEEeCCCChHHHHHHHHHcCC-CcEEEecCCCC-cccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCc
Q 014316 313 LYPRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLS-AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLP 390 (427)
Q Consensus 313 ~~~~~~l~i~G~G~~~~~~~~~~~~l~l-~~V~f~g~~~~-~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~P 390 (427)
..++++++++|+|+..... ++ .+|.|+|. ++ .+++.++|+.||++++| |..|++|++++|||+||+|
T Consensus 222 ~~~~~~~~i~G~~~~~~~~-------~~~~~v~~~g~-~~~~~~~~~~~~~ad~~l~p---s~~e~~g~~~~Eam~~g~P 290 (365)
T cd03825 222 WKDDIELVVFGASDPEIPP-------DLPFPVHYLGS-LNDDESLALIYSAADVFVVP---SLQENFPNTAIEALACGTP 290 (365)
T ss_pred cCCCeEEEEeCCCchhhhc-------cCCCceEecCC-cCCHHHHHHHHHhCCEEEec---cccccccHHHHHHHhcCCC
Confidence 1478999999998754321 33 47999997 77 77899999999999997 7789999999999999999
Q ss_pred EEEeccCccccceecCCcEEEe--CChHHHHHHHHHhc
Q 014316 391 VCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 391 VIas~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~~ 426 (427)
||+++.|+..|++.++.+|+++ .|.++++++|.++.
T Consensus 291 vI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~ 328 (365)
T cd03825 291 VVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLL 328 (365)
T ss_pred EEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHH
Confidence 9999999999999999999998 47899999988753
No 64
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.95 E-value=8.8e-26 Score=227.07 Aligned_cols=239 Identities=18% Similarity=0.280 Sum_probs=184.7
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
.++|+++++.+..... .+.......+.++++|+........ .....+...++..... .+.+|.++++|+..++
T Consensus 98 ~~~diii~~~~~~~~~----~~~~~~~~~~~i~~~h~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~d~ii~~s~~~~~ 170 (372)
T cd04949 98 TKPDVFILDRPTLDGQ----ALLNMKKAAKVVVVLHSNHVSDNND--PVHSLINNFYEYVFEN-LDKVDGVIVATEQQKQ 170 (372)
T ss_pred CCCCEEEECCccccch----hHHhccCCceEEEEEChHHhCCccc--ccccccchhhHHHHhC-hhhCCEEEEccHHHHH
Confidence 7899999998544322 2334445667889999763211110 0011222233333222 4679999999999999
Q ss_pred HHHHhhCCe--EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCC
Q 014316 180 ELAQNWGIK--ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPN 256 (427)
Q Consensus 180 ~l~~~~~~~--~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (427)
.+.+.++.. +.+|||+ +...+.+.. ....
T Consensus 171 ~l~~~~~~~~~v~~ip~g~~~~~~~~~~------------------------------------------------~~~~ 202 (372)
T cd04949 171 DLQKQFGNYNPIYTIPVGSIDPLKLPAQ------------------------------------------------FKQR 202 (372)
T ss_pred HHHHHhCCCCceEEEcccccChhhcccc------------------------------------------------hhhc
Confidence 998877654 7899998 544332211 0111
Q ss_pred CCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHHH
Q 014316 257 RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIR 336 (427)
Q Consensus 257 ~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~~ 336 (427)
.+..++++||+.+.||++.+++|+..+.+. .|+++|.|+|.|+....+++.++
T Consensus 203 ~~~~i~~vgrl~~~K~~~~li~a~~~l~~~---------------------------~~~~~l~i~G~g~~~~~~~~~~~ 255 (372)
T cd04949 203 KPHKIITVARLAPEKQLDQLIKAFAKVVKQ---------------------------VPDATLDIYGYGDEEEKLKELIE 255 (372)
T ss_pred CCCeEEEEEccCcccCHHHHHHHHHHHHHh---------------------------CCCcEEEEEEeCchHHHHHHHHH
Confidence 234799999999999999999999999876 78999999999998888888999
Q ss_pred HcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC-ccccceecCCcEEEeC-
Q 014316 337 RLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS-CIEELVKVDKNGLLFS- 413 (427)
Q Consensus 337 ~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~-g~~e~v~~~~~G~l~~- 413 (427)
++++. +|.|.|. .+++.++|+.||++|+| |..|++|++++|||+||+|||+++++ |..+++.++.+|++++
T Consensus 256 ~~~~~~~v~~~g~---~~~~~~~~~~ad~~v~~---S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~ 329 (372)
T cd04949 256 ELGLEDYVFLKGY---TRDLDEVYQKAQLSLLT---SQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPK 329 (372)
T ss_pred HcCCcceEEEcCC---CCCHHHHHhhhhEEEec---ccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCC
Confidence 98885 7999997 78999999999999997 77899999999999999999999987 8999999999999995
Q ss_pred -ChHHHHHHHHHhc
Q 014316 414 -SSSELADQLLVNA 426 (427)
Q Consensus 414 -~~~~la~~l~~~~ 426 (427)
|++++|++|..+.
T Consensus 330 ~d~~~la~~i~~ll 343 (372)
T cd04949 330 GDIEALAEAIIELL 343 (372)
T ss_pred CcHHHHHHHHHHHH
Confidence 8899999998764
No 65
>PHA01630 putative group 1 glycosyl transferase
Probab=99.94 E-value=4.4e-25 Score=219.91 Aligned_cols=188 Identities=12% Similarity=0.115 Sum_probs=148.1
Q ss_pred HhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHH-hccCCEEEEcCHHHHHHHHHhh-CC--eEEEecCC-CC
Q 014316 123 SSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYY-GKMANGCLCVTQAMQHELAQNW-GI--KATVLYDQ-PP 197 (427)
Q Consensus 123 ~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~~ad~vi~vS~~~~~~l~~~~-~~--~~~vi~n~-~~ 197 (427)
....|.|+++++|+. + .+.+.++.++ .+++|.++++|+.+++.+.+.. +. ++.+|||| |.
T Consensus 65 ~~~~~~~~v~e~~~~-~--------------~l~~~~~~~~~~~~ad~ii~~S~~~~~~l~~~g~~~~~~i~vIpNGVd~ 129 (331)
T PHA01630 65 IPHVGKNIVFEVADT-D--------------AISHTALYFFRNQPVDEIVVPSQWSKNAFYTSGLKIPQPIYVIPHNLNP 129 (331)
T ss_pred ccccCCceEEEEEee-c--------------hhhHHHHHHHhhccCCEEEECCHHHHHHHHHcCCCCCCCEEEECCCCCH
Confidence 334588999999985 2 2335566677 7889999999999999987652 22 58899999 76
Q ss_pred CCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHH
Q 014316 198 EFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILL 277 (427)
Q Consensus 198 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li 277 (427)
+.|.+... ..+.+.+++++|++.++||++.|+
T Consensus 130 ~~f~~~~~------------------------------------------------~~~~~~vl~~~g~~~~~Kg~d~Li 161 (331)
T PHA01630 130 RMFEYKPK------------------------------------------------EKPHPCVLAILPHSWDRKGGDIVV 161 (331)
T ss_pred HHcCCCcc------------------------------------------------ccCCCEEEEEeccccccCCHHHHH
Confidence 66643310 012345777888999999999999
Q ss_pred HHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHH
Q 014316 278 EAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPL 357 (427)
Q Consensus 278 ~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~ 357 (427)
+|++.+.++ .++++|+++|+|+....+ .++.. +.+. ++.+++..
T Consensus 162 ~A~~~l~~~---------------------------~~~~~llivG~~~~~~~l------~~~~~--~~~~-v~~~~l~~ 205 (331)
T PHA01630 162 KIFHELQNE---------------------------GYDFYFLIKSSNMLDPRL------FGLNG--VKTP-LPDDDIYS 205 (331)
T ss_pred HHHHHHHhh---------------------------CCCEEEEEEeCcccchhh------ccccc--eecc-CCHHHHHH
Confidence 999999875 678999999977643321 12322 3454 88999999
Q ss_pred HHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe
Q 014316 358 LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF 412 (427)
Q Consensus 358 ~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~ 412 (427)
+|+.||++|+| |..|+||++++||||||+|||+|+.||.+|++.++.+|+++
T Consensus 206 ~y~~aDv~v~p---S~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv 257 (331)
T PHA01630 206 LFAGCDILFYP---VRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWI 257 (331)
T ss_pred HHHhCCEEEEC---CccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEe
Confidence 99999999997 77899999999999999999999999999999999888776
No 66
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.93 E-value=7.6e-24 Score=211.25 Aligned_cols=302 Identities=19% Similarity=0.152 Sum_probs=193.1
Q ss_pred EeCCCCCChh-HHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHH
Q 014316 11 VLGDLGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFF 89 (427)
Q Consensus 11 ~~~~~~~~~r-~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (427)
..++.|+..+ ....+..|.++ ||+|+++|..... ........++++++++......... ...+..+...++...
T Consensus 5 ~~~~~gG~~~~~~~la~~l~~~-G~ev~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 79 (350)
T cd03785 5 AGGGTGGHIFPALALAEELRER-GAEVLFLGTKRGL-EARLVPKAGIPLHTIPVGGLRRKGS---LKKLKAPFKLLKGVL 79 (350)
T ss_pred EecCchhhhhHHHHHHHHHHhC-CCEEEEEECCCcc-hhhcccccCCceEEEEecCcCCCCh---HHHHHHHHHHHHHHH
Confidence 4444554444 33667788886 9999999876432 2222333478899888311111111 111111111111111
Q ss_pred HHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCE
Q 014316 90 MLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANG 169 (427)
Q Consensus 90 ~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ 169 (427)
.+ ..+ .+..+||+||+|++.. . +.+.++++..++|++++.|+. + . ...++++++.+|.
T Consensus 80 ~~-~~~-i~~~~pDvI~~~~~~~--~-~~~~~~a~~~~~p~v~~~~~~-~--------~--------~~~~~~~~~~~~~ 137 (350)
T cd03785 80 QA-RKI-LKKFKPDVVVGFGGYV--S-GPVGLAAKLLGIPLVIHEQNA-V--------P--------GLANRLLARFADR 137 (350)
T ss_pred HH-HHH-HHhcCCCEEEECCCCc--c-hHHHHHHHHhCCCEEEEcCCC-C--------c--------cHHHHHHHHhhCE
Confidence 11 111 2347899999997432 2 335677888899998866654 2 0 1234566678999
Q ss_pred EEEcCHHHHHHHHHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccc
Q 014316 170 CLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAG 248 (427)
Q Consensus 170 vi~vS~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (427)
++++|+.++++ ..+.++.+++|+ +.+.+.+.+ .+.
T Consensus 138 vi~~s~~~~~~---~~~~~~~~i~n~v~~~~~~~~~--~~~--------------------------------------- 173 (350)
T cd03785 138 VALSFPETAKY---FPKDKAVVTGNPVREEILALDR--ERA--------------------------------------- 173 (350)
T ss_pred EEEcchhhhhc---CCCCcEEEECCCCchHHhhhhh--hHH---------------------------------------
Confidence 99999998876 123458899998 555443321 011
Q ss_pred cccccCCCCCeEEEEEeecCCCCCHHH-HHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEE-EEEEeCCC
Q 014316 249 IDVFLKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL-FIITGKGP 326 (427)
Q Consensus 249 ~~~~~~~~~~~~i~~~g~~~~~K~~~~-Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~i~G~G~ 326 (427)
+...+++.+ ++++.|+....|+... +++|++.+.+ +++. ++++|+|
T Consensus 174 -~~~~~~~~~-~i~~~~g~~~~~~~~~~l~~a~~~l~~-----------------------------~~~~~~~i~G~g- 221 (350)
T cd03785 174 -RLGLRPGKP-TLLVFGGSQGARAINEAVPEALAELLR-----------------------------KRLQVIHQTGKG- 221 (350)
T ss_pred -hcCCCCCCe-EEEEECCcHhHHHHHHHHHHHHHHhhc-----------------------------cCeEEEEEcCCc-
Confidence 112333343 6666666666667654 4578877652 2455 5678988
Q ss_pred ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc--------
Q 014316 327 DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC-------- 398 (427)
Q Consensus 327 ~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g-------- 398 (427)
+.+++++.++++ .++|.|.|. .+++.++|+.||++|++ + + +++++|||++|+|||+++.++
T Consensus 222 ~~~~l~~~~~~~-~~~v~~~g~---~~~~~~~l~~ad~~v~~---s-g---~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~ 290 (350)
T cd03785 222 DLEEVKKAYEEL-GVNYEVFPF---IDDMAAAYAAADLVISR---A-G---ASTVAELAALGLPAILIPLPYAADDHQTA 290 (350)
T ss_pred cHHHHHHHHhcc-CCCeEEeeh---hhhHHHHHHhcCEEEEC---C-C---HhHHHHHHHhCCCEEEeecCCCCCCcHHH
Confidence 567788888776 468999998 48999999999999963 2 2 579999999999999987654
Q ss_pred cccceecCCcEEEeC----ChHHHHHHHHHhc
Q 014316 399 IEELVKVDKNGLLFS----SSSELADQLLVNA 426 (427)
Q Consensus 399 ~~e~v~~~~~G~l~~----~~~~la~~l~~~~ 426 (427)
..+.+.++.+|++++ |+++++++|.++.
T Consensus 291 ~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll 322 (350)
T cd03785 291 NARALVKAGAAVLIPQEELTPERLAAALLELL 322 (350)
T ss_pred hHHHHHhCCCEEEEecCCCCHHHHHHHHHHHh
Confidence 246677788999994 7899999998763
No 67
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.93 E-value=6.2e-24 Score=213.23 Aligned_cols=306 Identities=17% Similarity=0.119 Sum_probs=194.8
Q ss_pred ceEEEEEeCCCCCChh-HHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHH
Q 014316 5 GRACVVVLGDLGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLK 83 (427)
Q Consensus 5 ~~~~v~~~~~~~~~~r-~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (427)
++++++..+ .|+..+ +...+..|.++ ||+|++++...+. ........++++++++. ....... ....+....+
T Consensus 2 ~~i~i~~~g-~gG~~~~~~~la~~L~~~-g~ev~vv~~~~~~-~~~~~~~~g~~~~~~~~--~~~~~~~-~~~~l~~~~~ 75 (357)
T PRK00726 2 KKILLAGGG-TGGHVFPALALAEELKKR-GWEVLYLGTARGM-EARLVPKAGIEFHFIPS--GGLRRKG-SLANLKAPFK 75 (357)
T ss_pred cEEEEEcCc-chHhhhHHHHHHHHHHhC-CCEEEEEECCCch-hhhccccCCCcEEEEec--cCcCCCC-hHHHHHHHHH
Confidence 345554444 455444 34677778885 9999999975532 12233335899999983 1111111 1111112222
Q ss_pred HHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHH
Q 014316 84 PLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYY 163 (427)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 163 (427)
.+.....+ +.++ +..+||+||+|++ ...+.+.++++..++|+|++.|+. + . .+.++++
T Consensus 76 ~~~~~~~~-~~~i-k~~~pDvv~~~~~---~~~~~~~~~~~~~~~p~v~~~~~~-~--------~--------~~~~r~~ 133 (357)
T PRK00726 76 LLKGVLQA-RKIL-KRFKPDVVVGFGG---YVSGPGGLAARLLGIPLVIHEQNA-V--------P--------GLANKLL 133 (357)
T ss_pred HHHHHHHH-HHHH-HhcCCCEEEECCC---cchhHHHHHHHHcCCCEEEEcCCC-C--------c--------cHHHHHH
Confidence 22221111 1122 3478999999982 223335677788899999877764 2 0 1335666
Q ss_pred hccCCEEEEcCHHHHHHHHHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchh
Q 014316 164 GKMANGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETI 242 (427)
Q Consensus 164 ~~~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (427)
++.+|.+++.++.... +..+.++++++|+ +.+.+.+.. .+.
T Consensus 134 ~~~~d~ii~~~~~~~~---~~~~~~i~vi~n~v~~~~~~~~~--~~~--------------------------------- 175 (357)
T PRK00726 134 ARFAKKVATAFPGAFP---EFFKPKAVVTGNPVREEILALAA--PPA--------------------------------- 175 (357)
T ss_pred HHHhchheECchhhhh---ccCCCCEEEECCCCChHhhcccc--hhh---------------------------------
Confidence 7789999999875532 2224459999999 544433211 000
Q ss_pred hhcccccccccCCCCCeEEEEEeecCCCCCHHHHH-HHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEE
Q 014316 243 FTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILL-EAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII 321 (427)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li-~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 321 (427)
+...+++. .+|+++|+..+.|++..++ +|++++.+ .+ ..+++
T Consensus 176 -------~~~~~~~~-~~i~~~gg~~~~~~~~~~l~~a~~~~~~----------------------------~~-~~~~~ 218 (357)
T PRK00726 176 -------RLAGREGK-PTLLVVGGSQGARVLNEAVPEALALLPE----------------------------AL-QVIHQ 218 (357)
T ss_pred -------hccCCCCC-eEEEEECCcHhHHHHHHHHHHHHHHhhh----------------------------Cc-EEEEE
Confidence 01222333 4778888888888876666 88887743 23 56788
Q ss_pred EeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc---
Q 014316 322 TGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC--- 398 (427)
Q Consensus 322 ~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g--- 398 (427)
+|+|+. +++.+..+ ++++ |.|.|+ .+++.++|+.||++++. + + +++++|||++|+|+|++..++
T Consensus 219 ~G~g~~-~~~~~~~~-~~~~-v~~~g~---~~~~~~~~~~~d~~i~~---~-g---~~~~~Ea~~~g~Pvv~~~~~~~~~ 285 (357)
T PRK00726 219 TGKGDL-EEVRAAYA-AGIN-AEVVPF---IDDMAAAYAAADLVICR---A-G---ASTVAELAAAGLPAILVPLPHAAD 285 (357)
T ss_pred cCCCcH-HHHHHHhh-cCCc-EEEeeh---HhhHHHHHHhCCEEEEC---C-C---HHHHHHHHHhCCCEEEecCCCCCc
Confidence 999975 44555555 7765 999998 58999999999999973 2 1 689999999999999997643
Q ss_pred -----cccceecCCcEEEe--CC--hHHHHHHHHHhc
Q 014316 399 -----IEELVKVDKNGLLF--SS--SSELADQLLVNA 426 (427)
Q Consensus 399 -----~~e~v~~~~~G~l~--~~--~~~la~~l~~~~ 426 (427)
..+.+.++.+|+++ ++ +++|+++|+++.
T Consensus 286 ~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll 322 (357)
T PRK00726 286 DHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELL 322 (357)
T ss_pred CcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHH
Confidence 23567788899999 34 899999998763
No 68
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.93 E-value=1e-23 Score=210.23 Aligned_cols=302 Identities=15% Similarity=0.123 Sum_probs=186.4
Q ss_pred eEEEEEeCCCCCCh-hHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHH
Q 014316 6 RACVVVLGDLGRSP-RMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKP 84 (427)
Q Consensus 6 ~~~v~~~~~~~~~~-r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (427)
++.+ +.|+.++.- +....+..|.++ ||+|+++|..... .....+..|+++++++. ....... ....+......
T Consensus 2 ~i~~-~~g~~~g~~~~~~~La~~L~~~-g~eV~vv~~~~~~-~~~~~~~~g~~~~~i~~--~~~~~~~-~~~~l~~~~~~ 75 (348)
T TIGR01133 2 KVVL-AAGGTGGHIFPALAVAEELIKR-GVEVLWLGTKRGL-EKRLVPKAGIEFYFIPV--GGLRRKG-SFRLIKTPLKL 75 (348)
T ss_pred eEEE-EeCccHHHHhHHHHHHHHHHhC-CCEEEEEeCCCcc-hhcccccCCCceEEEec--cCcCCCC-hHHHHHHHHHH
Confidence 3444 344444333 234677888886 9999999864332 22223345899999983 2111111 11111111111
Q ss_pred HHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHh
Q 014316 85 LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYG 164 (427)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 164 (427)
+..... +.. +.+..+||+||+|++. . .+.+.++++..++|++++.++. + . .+.+++++
T Consensus 76 ~~~~~~-l~~-~i~~~~pDvVi~~~~~--~-~~~~~~~~~~~~~p~v~~~~~~-~--------~--------~~~~~~~~ 133 (348)
T TIGR01133 76 LKAVFQ-ARR-ILKKFKPDAVIGFGGY--V-SGPAGLAAKLLGIPLFHHEQNA-V--------P--------GLTNKLLS 133 (348)
T ss_pred HHHHHH-HHH-HHHhcCCCEEEEcCCc--c-cHHHHHHHHHcCCCEEEECCCC-C--------c--------cHHHHHHH
Confidence 111111 111 1234899999999732 2 2335566778899988654433 1 0 12356677
Q ss_pred ccCCEEEEcCHHHHHHHHHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhh
Q 014316 165 KMANGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIF 243 (427)
Q Consensus 165 ~~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (427)
+.+|.++++|+.+++++ +..+++|+ +...+.+.. .+.+
T Consensus 134 ~~~d~ii~~~~~~~~~~------~~~~i~n~v~~~~~~~~~--~~~~--------------------------------- 172 (348)
T TIGR01133 134 RFAKKVLISFPGAKDHF------EAVLVGNPVRQEIRSLPV--PRER--------------------------------- 172 (348)
T ss_pred HHhCeeEECchhHhhcC------CceEEcCCcCHHHhcccc--hhhh---------------------------------
Confidence 88999999999888665 23688998 433332211 0001
Q ss_pred hcccccccccCCCCCeEEEEEeecCCCCCHHH-HHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEE-EE
Q 014316 244 TSLAGIDVFLKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-II 321 (427)
Q Consensus 244 ~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~-Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~i 321 (427)
+..+++ ..+++++|+....|++.. +++|++.+.+. ++++ ++
T Consensus 173 -------~~~~~~-~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~-----------------------------~~~~~~~ 215 (348)
T TIGR01133 173 -------FGLREG-KPTILVLGGSQGAKILNELVPKALAKLAEK-----------------------------GIQIVHQ 215 (348)
T ss_pred -------cCCCCC-CeEEEEECCchhHHHHHHHHHHHHHHHhhc-----------------------------CcEEEEE
Confidence 123333 347888888777888765 45788776542 3444 45
Q ss_pred EeCCCChHHHHHHHHHcCCCc-EEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc--
Q 014316 322 TGKGPDKESYEEKIRRLRLKR-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC-- 398 (427)
Q Consensus 322 ~G~G~~~~~~~~~~~~l~l~~-V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g-- 398 (427)
+|+|+ .+.+++.++++++.+ +.|. . . ++.++|++||++|.+ + + |++++|||++|+|+|+++.++
T Consensus 216 ~g~~~-~~~l~~~~~~~~l~~~v~~~-~---~-~~~~~l~~ad~~v~~---~---g-~~~l~Ea~~~g~Pvv~~~~~~~~ 282 (348)
T TIGR01133 216 TGKND-LEKVKNVYQELGIEAIVTFI-D---E-NMAAAYAAADLVISR---A---G-ASTVAELAAAGVPAILIPYPYAA 282 (348)
T ss_pred CCcch-HHHHHHHHhhCCceEEecCc-c---c-CHHHHHHhCCEEEEC---C---C-hhHHHHHHHcCCCEEEeeCCCCc
Confidence 55554 477888888888754 3443 2 3 899999999999963 2 2 679999999999999998754
Q ss_pred -----cccceecCCcEEEe--CC--hHHHHHHHHHhc
Q 014316 399 -----IEELVKVDKNGLLF--SS--SSELADQLLVNA 426 (427)
Q Consensus 399 -----~~e~v~~~~~G~l~--~~--~~~la~~l~~~~ 426 (427)
..+++.++.+|+++ ++ +++|+++|+++.
T Consensus 283 ~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll 319 (348)
T TIGR01133 283 DDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLL 319 (348)
T ss_pred cchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHH
Confidence 23578889999998 33 899999998764
No 69
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.93 E-value=2.2e-23 Score=211.01 Aligned_cols=325 Identities=16% Similarity=0.099 Sum_probs=196.9
Q ss_pred ceEEEEEeCCCC-CChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecC-CCCCCCC--cchhhHHHH
Q 014316 5 GRACVVVLGDLG-RSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQW-PTIPRGL--PKVLKPVLL 80 (427)
Q Consensus 5 ~~~~v~~~~~~~-~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~-~~~~~~~--~~~~~~~~~ 80 (427)
+-+.++...+++ ...|-|..+..|+++ ||.|..+...+..........+..++..-... ..+.... .........
T Consensus 5 ~~~~~~~~~~w~~~~~~~qhl~~~~a~~-~~~vl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (373)
T cd04950 5 PDILVFSADDWDFLWQRPQHLAARLAER-GNRVLYVEPPGLSRTPQPRGRDWVRVVLRLRAALRRPRRLDPLIPARRRRL 83 (373)
T ss_pred CeEEEecccCcCCCCCCHHHHHHHHHhC-CCeEEEEeCCCccCCCCCCCcccEEeeecccccccCccccCccccchhhhH
Confidence 334444344555 567889999999976 99999997654300111112223333221100 0000000 000111111
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHH
Q 014316 81 LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIE 160 (427)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e 160 (427)
..+.+... +.+.......+.+++.++. +... .++..+.+.++|++++|. +.... +... .....|
T Consensus 84 ~~~~~~~~--~~~~~~~~~~~~~i~~~~~-P~~~-----~~~~~~~~~~~Vyd~~D~-~~~~~---~~~~----~~~~~e 147 (373)
T cd04950 84 LRLLLNAL--LFWAQLELGFGRPILWYYT-PYTL-----PVAALLQASLVVYDCVDD-LSAFP---GGPP----ELLEAE 147 (373)
T ss_pred HHHHHHHH--HHHHHHhcCCCCcEEEEeC-ccHH-----HHHhhcCCCeEEEEcccc-hhccC---CCCH----HHHHHH
Confidence 12222221 1111111124455555554 3222 233336788999999987 42221 1111 122778
Q ss_pred HHHhccCCEEEEcCHHHHHHHHHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCcc
Q 014316 161 KYYGKMANGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKAD 239 (427)
Q Consensus 161 ~~~~~~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (427)
+.+.+.||.|+++|+.+++.+.+. +.++.+|+|| |.+.|.+.......
T Consensus 148 ~~~~~~ad~vi~~S~~l~~~~~~~-~~~i~~i~ngvd~~~f~~~~~~~~~------------------------------ 196 (373)
T cd04950 148 RRLLKRADLVFTTSPSLYEAKRRL-NPNVVLVPNGVDYEHFAAARDPPPP------------------------------ 196 (373)
T ss_pred HHHHHhCCEEEECCHHHHHHHhhC-CCCEEEcccccCHHHhhcccccCCC------------------------------
Confidence 889999999999999999887654 5669999999 76666543210000
Q ss_pred chhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEE
Q 014316 240 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF 319 (427)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 319 (427)
.. . ....++ ..++|+|++.++++++.+.++++. .|+++|
T Consensus 197 ---~~-----~-~~~~~~-~~i~y~G~l~~~~d~~ll~~la~~-------------------------------~p~~~~ 235 (373)
T cd04950 197 ---PA-----D-LAALPR-PVIGYYGAIAEWLDLELLEALAKA-------------------------------RPDWSF 235 (373)
T ss_pred ---hh-----H-HhcCCC-CEEEEEeccccccCHHHHHHHHHH-------------------------------CCCCEE
Confidence 00 0 011223 489999999998888766554432 678999
Q ss_pred EEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCC--CCCCchHHHHHHcCCCcEEEeccC
Q 014316 320 IITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS--GLDLPMKVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 320 ~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~--~e~~p~~~lEama~G~PVIas~~~ 397 (427)
+|+|+|+..... ....+.+||+|+|. ++.++++.+++.+|++++|+..+. .+++|+|++||||||+|||+|+.+
T Consensus 236 vliG~~~~~~~~---~~~~~~~nV~~~G~-~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~ 311 (373)
T cd04950 236 VLIGPVDVSIDP---SALLRLPNVHYLGP-KPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLP 311 (373)
T ss_pred EEECCCcCccCh---hHhccCCCEEEeCC-CCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcH
Confidence 999998332222 22223579999997 999999999999999999865443 268999999999999999999876
Q ss_pred ccccceecCCcEEEe-CChHHHHHHHHHh
Q 014316 398 CIEELVKVDKNGLLF-SSSSELADQLLVN 425 (427)
Q Consensus 398 g~~e~v~~~~~G~l~-~~~~~la~~l~~~ 425 (427)
++.+ ....++++ +|+++++++|.+.
T Consensus 312 ~~~~---~~~~~~~~~~d~~~~~~ai~~~ 337 (373)
T cd04950 312 EVRR---YEDEVVLIADDPEEFVAAIEKA 337 (373)
T ss_pred HHHh---hcCcEEEeCCCHHHHHHHHHHH
Confidence 5543 44455555 6799999999874
No 70
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.92 E-value=5.8e-23 Score=211.32 Aligned_cols=313 Identities=15% Similarity=0.131 Sum_probs=198.8
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHhhCCCc--EEEEecCCCCCc-ccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHH
Q 014316 7 ACVVVLGDLGRSPRMQYQALSLARQMSLE--VDVVAYGGSKPH-AAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLK 83 (427)
Q Consensus 7 ~~v~~~~~~~~~~r~~~~a~~La~~~g~~--V~vi~~~~~~~~-~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (427)
..-++..+.|-.......+..|.++ +++ |.+.+...+... ......+++.++.+| .. . + ..+.+
T Consensus 52 ~iW~Ha~s~Ge~~~~~~l~~~l~~~-~~~~~i~~t~~t~~~~~~~~~~~~~~~~~~~~P--~d----~---~---~~~~~ 118 (425)
T PRK05749 52 LIWFHAVSVGETRAAIPLIRALRKR-YPDLPILVTTMTPTGSERAQALFGDDVEHRYLP--YD----L---P---GAVRR 118 (425)
T ss_pred eEEEEeCCHHHHHHHHHHHHHHHHh-CCCCcEEEeCCCccHHHHHHHhcCCCceEEEec--CC----c---H---HHHHH
Confidence 3334555565444455566666665 544 443332222111 111123357677777 11 1 1 13333
Q ss_pred HHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHH
Q 014316 84 PLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYY 163 (427)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 163 (427)
++.. .+||+++++.....+.. ...++..++|+++..|.... +.....+.+.++++.+
T Consensus 119 ~l~~------------~~Pd~v~~~~~~~~~~~---l~~~~~~~ip~vl~~~~~~~--------~s~~~~~~~~~~~r~~ 175 (425)
T PRK05749 119 FLRF------------WRPKLVIIMETELWPNL---IAELKRRGIPLVLANARLSE--------RSFKRYQKFKRFYRLL 175 (425)
T ss_pred HHHh------------hCCCEEEEEecchhHHH---HHHHHHCCCCEEEEeccCCh--------hhHHHHHHHHHHHHHH
Confidence 3433 79999999863323222 23456679998886554311 1111122345677788
Q ss_pred hccCCEEEEcCHHHHHHHHHhhCCe--EEEecCCCCCCcCCCC-hHHHHHHHhhhhhcccCCCCccccccCCCCCCCccc
Q 014316 164 GKMANGCLCVTQAMQHELAQNWGIK--ATVLYDQPPEFFHPTS-LEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADE 240 (427)
Q Consensus 164 ~~~ad~vi~vS~~~~~~l~~~~~~~--~~vi~n~~~~~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (427)
++.+|.++++|+.+++.+.+. |.+ +.+++|.+.+.+.+.. .....++..+
T Consensus 176 ~~~~d~ii~~S~~~~~~l~~~-g~~~~i~vi~n~~~d~~~~~~~~~~~~~~r~~-------------------------- 228 (425)
T PRK05749 176 FKNIDLVLAQSEEDAERFLAL-GAKNEVTVTGNLKFDIEVPPELAARAATLRRQ-------------------------- 228 (425)
T ss_pred HHhCCEEEECCHHHHHHHHHc-CCCCCcEecccccccCCCChhhHHHHHHHHHH--------------------------
Confidence 889999999999999998764 543 6778886433332211 1111121111
Q ss_pred hhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEE
Q 014316 241 TIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFI 320 (427)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 320 (427)
+. ++++ +++++|+. .|+.+.|++|++.+.+. +|+++|+
T Consensus 229 ----------~~--~~~~-vil~~~~~--~~~~~~ll~A~~~l~~~---------------------------~~~~~li 266 (425)
T PRK05749 229 ----------LA--PNRP-VWIAASTH--EGEEELVLDAHRALLKQ---------------------------FPNLLLI 266 (425)
T ss_pred ----------hc--CCCc-EEEEeCCC--chHHHHHHHHHHHHHHh---------------------------CCCcEEE
Confidence 11 2334 66777764 57899999999998775 7899999
Q ss_pred EEeCCCCh-HHHHHHHHHcCCCcEEEecCCCC-----------cccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCC
Q 014316 321 ITGKGPDK-ESYEEKIRRLRLKRVAFRTMWLS-----------AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCG 388 (427)
Q Consensus 321 i~G~G~~~-~~~~~~~~~l~l~~V~f~g~~~~-----------~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G 388 (427)
|+|+|+.+ ++++++++++|++.+.|.+...+ .+++..+|+.||+++++ +|..|++|..++||||||
T Consensus 267 ivG~g~~r~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~~~~~el~~~y~~aDi~~v~--~S~~e~~g~~~lEAma~G 344 (425)
T PRK05749 267 LVPRHPERFKEVEELLKKAGLSYVRRSQGEPPSADTDVLLGDTMGELGLLYAIADIAFVG--GSLVKRGGHNPLEPAAFG 344 (425)
T ss_pred EcCCChhhHHHHHHHHHhCCCcEEEccCCCCCCCCCcEEEEecHHHHHHHHHhCCEEEEC--CCcCCCCCCCHHHHHHhC
Confidence 99999986 78999999999876666664221 35899999999997764 255588999999999999
Q ss_pred CcEEEec-cCccccceecC-CcEEEe--CChHHHHHHHHHhc
Q 014316 389 LPVCAVS-YSCIEELVKVD-KNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 389 ~PVIas~-~~g~~e~v~~~-~~G~l~--~~~~~la~~l~~~~ 426 (427)
+|||+++ .++..|+++.. .+|+++ +|+++||++|.++.
T Consensus 345 ~PVI~g~~~~~~~e~~~~~~~~g~~~~~~d~~~La~~l~~ll 386 (425)
T PRK05749 345 VPVISGPHTFNFKEIFERLLQAGAAIQVEDAEDLAKAVTYLL 386 (425)
T ss_pred CCEEECCCccCHHHHHHHHHHCCCeEEECCHHHHHHHHHHHh
Confidence 9999986 46666665442 345554 88999999998763
No 71
>PHA01633 putative glycosyl transferase group 1
Probab=99.91 E-value=3.2e-22 Score=198.38 Aligned_cols=206 Identities=13% Similarity=0.177 Sum_probs=151.3
Q ss_pred CCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHHHHHHhhCCe-EEEecCC-CCCCcCCCC
Q 014316 127 RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-PPEFFHPTS 204 (427)
Q Consensus 127 ~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~-~~~~f~~~~ 204 (427)
+.+|+.|+|+. |. . +++.+++.+ .+.+|++|+.+++.+++. |.+ ..+|+|| |.+.|.+..
T Consensus 70 ~~~~~tt~~g~-~~--------~-------~~y~~~m~~-~~~vIavS~~t~~~L~~~-G~~~~i~I~~GVD~~~f~p~~ 131 (335)
T PHA01633 70 KKYFYTTCDGI-PN--------I-------EIVNKYLLQ-DVKFIPNSKFSAENLQEV-GLQVDLPVFHGINFKIVENAE 131 (335)
T ss_pred CCceEEeeCCc-Cc--------h-------HHHHHHHhc-CCEEEeCCHHHHHHHHHh-CCCCceeeeCCCChhhcCccc
Confidence 56788899988 41 1 344455555 668999999999999864 553 2347788 877776543
Q ss_pred hHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhH
Q 014316 205 LEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYD 284 (427)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~ 284 (427)
. ...++.+++ ........+++++||+.++||++.|++|++.+.
T Consensus 132 ~-~~~~~r~~~------------------------------------~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~ 174 (335)
T PHA01633 132 K-LVPQLKQKL------------------------------------DKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELN 174 (335)
T ss_pred h-hhHHHHHHh------------------------------------CcCCCCCeEEEEEeCCccccCHHHHHHHHHHHH
Confidence 1 111221111 111113358999999999999999999999998
Q ss_pred HHHhhhhccCCCchhhhhhhhhcCCcccCCC----CEEEEEEeCCCChHHHHHHHHHcCCC-cEEEecC--CCCcccHHH
Q 014316 285 RRVAAILNEDDSTNEEVFLKEISDGKQYLYP----RLLFIITGKGPDKESYEEKIRRLRLK-RVAFRTM--WLSAEDYPL 357 (427)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~G~G~~~~~~~~~~~~l~l~-~V~f~g~--~~~~~~~~~ 357 (427)
++ .| +++++++|++ ..+++++. +|+|+|. +++.+++.+
T Consensus 175 ~~---------------------------~p~~~~~i~l~ivG~~--------~~~~l~l~~~V~f~g~~G~~~~~dl~~ 219 (335)
T PHA01633 175 TK---------------------------YPDIAKKIHFFVISHK--------QFTQLEVPANVHFVAEFGHNSREYIFA 219 (335)
T ss_pred Hh---------------------------CCCccccEEEEEEcHH--------HHHHcCCCCcEEEEecCCCCCHHHHHH
Confidence 75 44 4678888732 33556674 7999952 367899999
Q ss_pred HHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceec------------------CCcEEEe--CChHH
Q 014316 358 LLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV------------------DKNGLLF--SSSSE 417 (427)
Q Consensus 358 ~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~------------------~~~G~l~--~~~~~ 417 (427)
+|++||++|+| |..|+||++++||||||+|||+|+.|+++|++.+ +..|+++ .|+++
T Consensus 220 ~y~~aDifV~P---S~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~ 296 (335)
T PHA01633 220 FYGAMDFTIVP---SGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIED 296 (335)
T ss_pred HHHhCCEEEEC---CccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHH
Confidence 99999999998 7789999999999999999999999999997542 2346677 47899
Q ss_pred HHHHHHHh
Q 014316 418 LADQLLVN 425 (427)
Q Consensus 418 la~~l~~~ 425 (427)
+|++|...
T Consensus 297 la~ai~~~ 304 (335)
T PHA01633 297 MANAIILA 304 (335)
T ss_pred HHHHHHHH
Confidence 99999764
No 72
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.89 E-value=4.9e-21 Score=198.51 Aligned_cols=291 Identities=18% Similarity=0.110 Sum_probs=180.9
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHH-hhcCCcEEEEecccchhhhhhhcCCCchH-----------------HHHHHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWAS-SLRRSAFIVDWHNFGYTLLSLSLGRRSHF-----------------VSIYRWIEK 161 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~-~~~~~p~i~~~h~~~~~~~~~~~~~~~~~-----------------~~~~~~~e~ 161 (427)
.++|++|+|. +.+...+..++ +..++|.|+|.|...+ -.....+. ..+ ..-..++|+
T Consensus 147 ~~~dViH~He---Wm~g~a~~~lK~~~~~VptVfTtHAT~~-GR~l~~g~-~~~y~~l~~~~~d~eA~~~~I~~r~~iE~ 221 (590)
T cd03793 147 EPAVVAHFHE---WQAGVGLPLLRKRKVDVSTIFTTHATLL-GRYLCAGN-VDFYNNLDYFDVDKEAGKRGIYHRYCIER 221 (590)
T ss_pred CCCeEEEEcc---hhHhHHHHHHHHhCCCCCEEEEeccccc-ccccccCC-cccchhhhhcchhhhhhcccchHHHHHHH
Confidence 5799999999 66666455555 4568899999996632 00000010 111 012346899
Q ss_pred HHhccCCEEEEcCHHHHHHHHHhhCCe-EEEecCC-CCCCcCCCChHH-HH-HHHhhhhhcccCCCCccccccCCCCCCC
Q 014316 162 YYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-PPEFFHPTSLEE-KH-ELFCRLNKILHQPLGVQDCVSNGMEGQK 237 (427)
Q Consensus 162 ~~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~-~~~~f~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (427)
.+...||.+++||+.++++....++.+ -.||||| +.+.|.+..... .+ .-..++.
T Consensus 222 ~aa~~Ad~fttVS~it~~E~~~Ll~~~pd~ViPNGid~~~f~~~~e~~~~~~~~k~ki~--------------------- 280 (590)
T cd03793 222 AAAHCAHVFTTVSEITAYEAEHLLKRKPDVVLPNGLNVKKFSALHEFQNLHAQSKEKIN--------------------- 280 (590)
T ss_pred HHHhhCCEEEECChHHHHHHHHHhCCCCCEEeCCCcchhhcccchhhhhhhHHhhhhhh---------------------
Confidence 999999999999999999999988887 3499999 888886653211 11 1111111
Q ss_pred ccchhh-hcccccccccCCCCCeEEEE-EeecCC-CCCHHHHHHHHHhhHHHHhhhhc---------cCCCch-------
Q 014316 238 ADETIF-TSLAGIDVFLKPNRPALVVS-STSWTP-DEDFGILLEAALMYDRRVAAILN---------EDDSTN------- 298 (427)
Q Consensus 238 ~~~~~~-~~~~~~~~~~~~~~~~~i~~-~g~~~~-~K~~~~Li~a~~~l~~~~~~~~~---------~~~~~~------- 298 (427)
.| .+..+..+.+.++++ +++| +||++. +||++.+|+|++.+.+....... --+.+|
T Consensus 281 ----~f~~~~~~~~~~~~~d~t-li~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l 355 (590)
T cd03793 281 ----EFVRGHFYGHYDFDLDKT-LYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESL 355 (590)
T ss_pred ----HHHHHHHhhhcCCCCCCe-EEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhh
Confidence 11 001122334455565 4445 899998 99999999999999886433211 001111
Q ss_pred --hhhh--------------hhh---------hcCCcc-------------------cCCCCEEEEEEeCCCChHHHHHH
Q 014316 299 --EEVF--------------LKE---------ISDGKQ-------------------YLYPRLLFIITGKGPDKESYEEK 334 (427)
Q Consensus 299 --~~~~--------------~~~---------~~~~~~-------------------~~~~~~~l~i~G~G~~~~~~~~~ 334 (427)
|++. -+. +++..+ ...|.+.-.-.-+ ...+.+-..
T Consensus 356 ~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~-~~~D~il~~ 434 (590)
T cd03793 356 KGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVD-DANDPILNH 434 (590)
T ss_pred cchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCc-CccCHHHHH
Confidence 1100 000 111000 0111111111111 223455566
Q ss_pred HHHcCCC-------cEEEecCCCCcc------cHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcc--
Q 014316 335 IRRLRLK-------RVAFRTMWLSAE------DYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI-- 399 (427)
Q Consensus 335 ~~~l~l~-------~V~f~g~~~~~~------~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~-- 399 (427)
++++++- .|.|...+++.. +..+++++||++|+| |.+|+||++++||||||+|||+|+.+|.
T Consensus 435 ~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~P---S~yE~fG~~~lEAma~G~PvI~t~~~gf~~ 511 (590)
T cd03793 435 IRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFP---SYYEPWGYTPAECTVMGIPSITTNLSGFGC 511 (590)
T ss_pred HHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEec---cccCCCCcHHHHHHHcCCCEEEccCcchhh
Confidence 7777662 288888767633 588999999999998 8899999999999999999999999988
Q ss_pred --ccceecC-CcEEEeC---------ChHHHHHHHHHh
Q 014316 400 --EELVKVD-KNGLLFS---------SSSELADQLLVN 425 (427)
Q Consensus 400 --~e~v~~~-~~G~l~~---------~~~~la~~l~~~ 425 (427)
.|++.++ ..|+++. +.++|+++|.++
T Consensus 512 ~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~ 549 (590)
T cd03793 512 FMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEF 549 (590)
T ss_pred hhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHHH
Confidence 5666554 3577763 246777777664
No 73
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.87 E-value=5.8e-21 Score=190.60 Aligned_cols=222 Identities=14% Similarity=0.125 Sum_probs=155.2
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhh--cCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSL--RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~--~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (427)
.+-|+||+++|+.....+...++.++ .++|+|+++||+ ++... .... ...+.++.+++.||.++|+|+.+
T Consensus 63 ~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~-~~~~~---~~~~----~~~~~~~~~~~~aD~iI~~S~~~ 134 (333)
T PRK09814 63 KPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDI-EPLRF---DSNY----YLMKEEIDMLNLADVLIVHSKKM 134 (333)
T ss_pred CCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCc-HHHhc---cccc----hhhHHHHHHHHhCCEEEECCHHH
Confidence 34499999998765422223333322 379999999998 43311 1111 12466788889999999999999
Q ss_pred HHHHHHhhCC---eEEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccC
Q 014316 178 QHELAQNWGI---KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (427)
Q Consensus 178 ~~~l~~~~~~---~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (427)
++++.+. |. ++.++++.+.... .. .+ ...
T Consensus 135 ~~~l~~~-g~~~~~i~~~~~~~~~~~--~~--~~-------------------------------------------~~~ 166 (333)
T PRK09814 135 KDRLVEE-GLTTDKIIVQGIFDYLND--IE--LV-------------------------------------------KTP 166 (333)
T ss_pred HHHHHHc-CCCcCceEeccccccccc--cc--cc-------------------------------------------ccc
Confidence 9999764 54 2555555431100 00 00 001
Q ss_pred CCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHH
Q 014316 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEK 334 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~ 334 (427)
. ....|+|+|++...+++ .+. .++++|.++|+|+..+
T Consensus 167 ~-~~~~i~yaG~l~k~~~l----------~~~---------------------------~~~~~l~i~G~g~~~~----- 203 (333)
T PRK09814 167 S-FQKKINFAGNLEKSPFL----------KNW---------------------------SQGIKLTVFGPNPEDL----- 203 (333)
T ss_pred c-CCceEEEecChhhchHH----------Hhc---------------------------CCCCeEEEECCCcccc-----
Confidence 1 22489999999843221 111 4578999999998644
Q ss_pred HHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccC----C--C--CCCCchHHHHHHcCCCcEEEeccCccccceecC
Q 014316 335 IRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTS----S--S--GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD 406 (427)
Q Consensus 335 ~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~----s--~--~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~ 406 (427)
...++|+|+|. ++.++++.+|+. |+++++... + . ...+|.|+.||||||+|||+++.++..|+|+++
T Consensus 204 ---~~~~~V~f~G~-~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~ 278 (333)
T PRK09814 204 ---ENSANISYKGW-FDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVEN 278 (333)
T ss_pred ---ccCCCeEEecC-CCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhC
Confidence 12358999996 999999999998 777764322 1 1 257899999999999999999999999999999
Q ss_pred CcEEEeCChHHHHHHHHHh
Q 014316 407 KNGLLFSSSSELADQLLVN 425 (427)
Q Consensus 407 ~~G~l~~~~~~la~~l~~~ 425 (427)
.+|+++++.++++++|.++
T Consensus 279 ~~G~~v~~~~el~~~l~~~ 297 (333)
T PRK09814 279 GLGFVVDSLEELPEIIDNI 297 (333)
T ss_pred CceEEeCCHHHHHHHHHhc
Confidence 9999999989999988754
No 74
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.86 E-value=1.1e-19 Score=167.67 Aligned_cols=120 Identities=33% Similarity=0.435 Sum_probs=105.7
Q ss_pred EEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHHHHcCC-C
Q 014316 263 SSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRL-K 341 (427)
Q Consensus 263 ~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~~~l~l-~ 341 (427)
|+|++.+.||++.+++|+..+.+. .++++++++|.++.....++.+.+++. +
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~---------------------------~~~~~~~i~G~~~~~~~~~~~~~~~~~~~ 161 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKER---------------------------GPDLKLVIAGDGPEREYLEELLAALLLLD 161 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHh---------------------------CCCeEEEEEeCCCChHHHHHHHHhcCCcc
Confidence 999999999999999999999876 689999999999887777766677666 5
Q ss_pred cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe
Q 014316 342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF 412 (427)
Q Consensus 342 ~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~ 412 (427)
+|.+.|...+.+++..++++||++++| +..|++|++++|||++|+|+|+|+.++..|++.++++|+++
T Consensus 162 ~v~~~~~~~~~~~~~~~~~~~di~l~~---~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 162 RVIFLGGLDPEELLALLLAAADVFVLP---SLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred cEEEeCCCCcHHHHHHHhhcCCEEEec---ccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 899999722566777777779999997 77789999999999999999999999999999999999875
No 75
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.84 E-value=1.4e-20 Score=168.88 Aligned_cols=142 Identities=24% Similarity=0.414 Sum_probs=125.1
Q ss_pred CCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHH
Q 014316 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEK 334 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~ 334 (427)
.+++..|+++|++.+.||++.+++|+..+.++ ..+++.++|+|+++....+...
T Consensus 12 ~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~--------------------------~~~~~~l~i~G~~~~~~~~~~~ 65 (172)
T PF00534_consen 12 PDKKKIILFIGRLDPEKGIDLLIEAFKKLKEK--------------------------KNPNYKLVIVGDGEYKKELKNL 65 (172)
T ss_dssp -TTSEEEEEESESSGGGTHHHHHHHHHHHHHH--------------------------HHTTEEEEEESHCCHHHHHHHH
T ss_pred CCCCeEEEEEecCccccCHHHHHHHHHHHHhh--------------------------cCCCeEEEEEcccccccccccc
Confidence 34567999999999999999999999999763 1578999999999888889999
Q ss_pred HHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe-
Q 014316 335 IRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF- 412 (427)
Q Consensus 335 ~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~- 412 (427)
++.+++. ++.|.|. ++.+++.++|+.||++++| |..|++|.+++|||+||+|||+++.|+..|++.++.+|+++
T Consensus 66 ~~~~~~~~~i~~~~~-~~~~~l~~~~~~~di~v~~---s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~ 141 (172)
T PF00534_consen 66 IEKLNLKENIIFLGY-VPDDELDELYKSSDIFVSP---SRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFD 141 (172)
T ss_dssp HHHTTCGTTEEEEES-HSHHHHHHHHHHTSEEEE----BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEES
T ss_pred ccccccccccccccc-ccccccccccccceecccc---ccccccccccccccccccceeeccccCCceeeccccceEEeC
Confidence 9999984 8999998 7788999999999999997 66799999999999999999999999999999999999999
Q ss_pred -CChHHHHHHHHHhc
Q 014316 413 -SSSSELADQLLVNA 426 (427)
Q Consensus 413 -~~~~~la~~l~~~~ 426 (427)
.++++++++|.++.
T Consensus 142 ~~~~~~l~~~i~~~l 156 (172)
T PF00534_consen 142 PNDIEELADAIEKLL 156 (172)
T ss_dssp TTSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 45699999998763
No 76
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.84 E-value=9.1e-20 Score=189.57 Aligned_cols=245 Identities=14% Similarity=0.081 Sum_probs=161.9
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHh-hcCCcEEEEecccchhhhh-hhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLS-LSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~-~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (427)
...|+|++|.+ ..+.+..++.. ..+.|+.+.+|-. |+-.. +..-.. .+.+-+.+. .+|.+.+-+...
T Consensus 130 ~~~d~iwihDy---hl~llp~~lr~~~~~~~i~~f~Hip-fP~~e~~~~lp~------~~~ll~~~l-~~D~igF~t~~~ 198 (460)
T cd03788 130 RPGDLVWVHDY---HLLLLPQMLRERGPDARIGFFLHIP-FPSSEIFRCLPW------REELLRGLL-GADLIGFQTERY 198 (460)
T ss_pred CCCCEEEEeCh---hhhHHHHHHHhhCCCCeEEEEEeCC-CCChHHHhhCCC------hHHHHHHHh-cCCEEEECCHHH
Confidence 46899999994 34444445543 3467888889855 31110 000000 012222222 388888888665
Q ss_pred HHHHHHh-----------------hCC--eEEEecCC-CCCCcCCCC--hHHHHHHHhhhhhcccCCCCccccccCCCCC
Q 014316 178 QHELAQN-----------------WGI--KATVLYDQ-PPEFFHPTS--LEEKHELFCRLNKILHQPLGVQDCVSNGMEG 235 (427)
Q Consensus 178 ~~~l~~~-----------------~~~--~~~vi~n~-~~~~f~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (427)
.+.+.+. .|. ++.++||| |.+.|.+.. .+.+..+. ++
T Consensus 199 ~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~~~~~~~~~-~~-------------------- 257 (460)
T cd03788 199 ARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQERAA-EL-------------------- 257 (460)
T ss_pred HHHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcCchhHHHHH-HH--------------------
Confidence 5444332 122 27889999 877775432 11111110 00
Q ss_pred CCccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCC
Q 014316 236 QKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP 315 (427)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (427)
....+++ .+|+++||+.+.||++.+++|++.+.++ +|
T Consensus 258 ---------------~~~~~~~-~~il~vgRl~~~Kgi~~ll~A~~~ll~~---------------------------~p 294 (460)
T cd03788 258 ---------------RERLGGR-KLIVGVDRLDYSKGIPERLLAFERLLER---------------------------YP 294 (460)
T ss_pred ---------------HHhcCCC-EEEEEecCccccCCHHHHHHHHHHHHHh---------------------------Ch
Confidence 0112333 4899999999999999999999998876 55
Q ss_pred C----EEEEEEeCC-----CChHHHHHHHH----HcC-------CCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCC
Q 014316 316 R----LLFIITGKG-----PDKESYEEKIR----RLR-------LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGL 375 (427)
Q Consensus 316 ~----~~l~i~G~G-----~~~~~~~~~~~----~l~-------l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e 375 (427)
+ ++|+++|.+ +..+++++.++ +++ ...|.|.+..++.+++.++|+.||++|+| |..|
T Consensus 295 ~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~p---S~~E 371 (460)
T cd03788 295 EWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVT---PLRD 371 (460)
T ss_pred hhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeC---cccc
Confidence 4 678888643 33334444333 332 23566665448999999999999999997 8889
Q ss_pred CCchHHHHHHcCCCc----EEEeccCccccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 376 DLPMKVVDMFGCGLP----VCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 376 ~~p~~~lEama~G~P----VIas~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
+||++++||||||+| ||+|+.+|..+. +.+|+++ .|++++|++|.++
T Consensus 372 g~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~lv~p~d~~~la~ai~~~ 424 (460)
T cd03788 372 GMNLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGALLVNPYDIDEVADAIHRA 424 (460)
T ss_pred ccCcccceeEEEecCCCceEEEeccccchhh---cCCCEEECCCCHHHHHHHHHHH
Confidence 999999999999999 999998888776 5689999 5789999999875
No 77
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.84 E-value=4e-19 Score=180.05 Aligned_cols=225 Identities=12% Similarity=0.071 Sum_probs=150.0
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
..+||+||++.|.. ... ....+...++|++..++++.. . .+++.+.+|.++++|+.++
T Consensus 102 ~~~pD~Vi~~~~~~--~~~-~~~~~~~~~ip~~~~~td~~~-------~------------~~~~~~~ad~i~~~s~~~~ 159 (380)
T PRK13609 102 AEKPDIVINTFPII--AVP-ELKKQTGISIPTYNVLTDFCL-------H------------KIWVHREVDRYFVATDHVK 159 (380)
T ss_pred HhCcCEEEEcChHH--HHH-HHHHhcCCCCCeEEEeCCCCC-------C------------cccccCCCCEEEECCHHHH
Confidence 47999999986422 222 222233457897755555421 0 1234678999999999999
Q ss_pred HHHHHhhCCe---EEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCC
Q 014316 179 HELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP 255 (427)
Q Consensus 179 ~~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (427)
+.+.+. |.+ +.++.+.-.+.|.+... +..++. ++++++
T Consensus 160 ~~l~~~-gi~~~ki~v~G~p~~~~f~~~~~--~~~~~~------------------------------------~~~l~~ 200 (380)
T PRK13609 160 KVLVDI-GVPPEQVVETGIPIRSSFELKIN--PDIIYN------------------------------------KYQLCP 200 (380)
T ss_pred HHHHHc-CCChhHEEEECcccChHHcCcCC--HHHHHH------------------------------------HcCCCC
Confidence 998764 553 55654432122322111 111111 224555
Q ss_pred CCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEe-CC-CChHHHHH
Q 014316 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG-KG-PDKESYEE 333 (427)
Q Consensus 256 ~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G-~G-~~~~~~~~ 333 (427)
+++.++++.|++...|++..+++++.. .++++++++| .+ +..+.+++
T Consensus 201 ~~~~il~~~G~~~~~k~~~~li~~l~~-------------------------------~~~~~~viv~G~~~~~~~~l~~ 249 (380)
T PRK13609 201 NKKILLIMAGAHGVLGNVKELCQSLMS-------------------------------VPDLQVVVVCGKNEALKQSLED 249 (380)
T ss_pred CCcEEEEEcCCCCCCcCHHHHHHHHhh-------------------------------CCCcEEEEEeCCCHHHHHHHHH
Confidence 666677888999999999999988753 3578887764 33 34567777
Q ss_pred HHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec-cCccc----cceecCCc
Q 014316 334 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIE----ELVKVDKN 408 (427)
Q Consensus 334 ~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~-~~g~~----e~v~~~~~ 408 (427)
++++++ ++|+|+|+ .+++.++|+.||+++. ++.|++++|||+||+|||+++ .+|.. +.+.+...
T Consensus 250 ~~~~~~-~~v~~~g~---~~~~~~l~~~aD~~v~-------~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~G~ 318 (380)
T PRK13609 250 LQETNP-DALKVFGY---VENIDELFRVTSCMIT-------KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFERKGA 318 (380)
T ss_pred HHhcCC-CcEEEEec---hhhHHHHHHhccEEEe-------CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhCCc
Confidence 777665 68999998 5789999999999884 124779999999999999986 56532 24444445
Q ss_pred EEEeCChHHHHHHHHHhc
Q 014316 409 GLLFSSSSELADQLLVNA 426 (427)
Q Consensus 409 G~l~~~~~~la~~l~~~~ 426 (427)
|+...++++++++|.++.
T Consensus 319 ~~~~~~~~~l~~~i~~ll 336 (380)
T PRK13609 319 AVVIRDDEEVFAKTEALL 336 (380)
T ss_pred EEEECCHHHHHHHHHHHH
Confidence 665689999999988763
No 78
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.82 E-value=2.4e-18 Score=178.24 Aligned_cols=245 Identities=11% Similarity=0.096 Sum_probs=166.6
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhh-cCCcEEEEecccchhhhhhhcCCCchHHH--HHHHHHHHHhccCCEEEEcCHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSLGRRSHFVS--IYRWIEKYYGKMANGCLCVTQA 176 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~-~~~p~i~~~h~~~~~~~~~~~~~~~~~~~--~~~~~e~~~~~~ad~vi~vS~~ 176 (427)
..-|+|.+|+ +...++..++... ...++.+.+|-. |+. ...|.. ..+.+-+-+ -.||.|-+-|..
T Consensus 126 ~~~d~vwvhD---Yhl~l~p~~lr~~~~~~~igfFlHip-fP~-------~e~f~~lp~r~~il~gl-l~~dligF~t~~ 193 (456)
T TIGR02400 126 QPGDIVWVHD---YHLMLLPAMLRELGVQNKIGFFLHIP-FPS-------SEIYRTLPWRRELLEGL-LAYDLVGFQTYD 193 (456)
T ss_pred CCCCEEEEec---chhhHHHHHHHhhCCCCeEEEEEeCC-CCC-------hHHHhhCCcHHHHHHHH-hcCCEEEECCHH
Confidence 4568999999 5555656666554 355777788855 311 111111 011122222 258999999988
Q ss_pred HHHHHHHh----hC------------Ce--EEEecCC-CCCCcCCCChH-HHHHHHhhhhhcccCCCCccccccCCCCCC
Q 014316 177 MQHELAQN----WG------------IK--ATVLYDQ-PPEFFHPTSLE-EKHELFCRLNKILHQPLGVQDCVSNGMEGQ 236 (427)
Q Consensus 177 ~~~~l~~~----~~------------~~--~~vi~n~-~~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (427)
..+.+.+. ++ .. +.++||| |.+.|.+.... ...+....
T Consensus 194 ~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~---------------------- 251 (456)
T TIGR02400 194 DARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAE---------------------- 251 (456)
T ss_pred HHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHHH----------------------
Confidence 88776542 11 22 7789999 88777543211 00000000
Q ss_pred CccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCC
Q 014316 237 KADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR 316 (427)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (427)
++.+ + .++ .+|+++||+.+.||++.+++|++.+.++ +|+
T Consensus 252 ----------lr~~--~-~~~-~vIl~VgRLd~~KGi~~ll~A~~~ll~~---------------------------~p~ 290 (456)
T TIGR02400 252 ----------LRES--L-KGR-KLIIGVDRLDYSKGLPERLLAFERFLEE---------------------------HPE 290 (456)
T ss_pred ----------HHHH--c-CCC-eEEEEccccccccCHHHHHHHHHHHHHh---------------------------Ccc
Confidence 1111 1 223 4899999999999999999999998776 564
Q ss_pred ----EEEEEEe-----CCCChHHHHHHHHHc--------C-CC--cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCC
Q 014316 317 ----LLFIITG-----KGPDKESYEEKIRRL--------R-LK--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLD 376 (427)
Q Consensus 317 ----~~l~i~G-----~G~~~~~~~~~~~~l--------~-l~--~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~ 376 (427)
+.|+++| +|+..+++++.++++ + +. .+.+++..++.+++.++|++||++|+| |..||
T Consensus 291 ~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~---S~~EG 367 (456)
T TIGR02400 291 WRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVT---PLRDG 367 (456)
T ss_pred ccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEEC---ccccc
Confidence 5677764 556666666666654 1 11 255555448999999999999999997 88899
Q ss_pred CchHHHHHHcCCCc----EEEeccCccccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 377 LPMKVVDMFGCGLP----VCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 377 ~p~~~lEama~G~P----VIas~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
+|++++||||||+| +|+|+.+|..+.+. +|+++ .|++++|++|.++
T Consensus 368 ~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~---~gllVnP~d~~~lA~aI~~a 419 (456)
T TIGR02400 368 MNLVAKEYVAAQDPKDGVLILSEFAGAAQELN---GALLVNPYDIDGMADAIARA 419 (456)
T ss_pred cCccHHHHHHhcCCCCceEEEeCCCCChHHhC---CcEEECCCCHHHHHHHHHHH
Confidence 99999999999999 99999888888773 79999 6789999999764
No 79
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.81 E-value=1.7e-18 Score=173.76 Aligned_cols=236 Identities=16% Similarity=0.057 Sum_probs=161.6
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
.+||+||+|... ...+.+.++++..++|+++..|+. .+ ........ +..+.+.+.+|.++++|+..++
T Consensus 87 ~~pDvV~~~g~~--~~~~~~~~aa~~~~iPvv~~~~g~-~s-----~~~~~~~~----~~r~~~~~~ad~~~~~s~~~~~ 154 (363)
T cd03786 87 EKPDLVLVLGDT--NETLAAALAAFKLGIPVAHVEAGL-RS-----FDRGMPDE----ENRHAIDKLSDLHFAPTEEARR 154 (363)
T ss_pred hCCCEEEEeCCc--hHHHHHHHHHHHcCCCEEEEeccc-cc-----CCCCCCch----HHHHHHHHHhhhccCCCHHHHH
Confidence 699999999732 233446677888899988766653 11 00111111 1222355788999999999999
Q ss_pred HHHHhhCCe---EEEecCC--CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccC
Q 014316 180 ELAQNWGIK---ATVLYDQ--PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (427)
Q Consensus 180 ~l~~~~~~~---~~vi~n~--~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (427)
++.+. |.+ +.+++|+ |...+.+.. ...+. .++....
T Consensus 155 ~l~~~-G~~~~kI~vign~v~d~~~~~~~~--~~~~~-----------------------------------~~~~~~~- 195 (363)
T cd03786 155 NLLQE-GEPPERIFVVGNTMIDALLRLLEL--AKKEL-----------------------------------ILELLGL- 195 (363)
T ss_pred HHHHc-CCCcccEEEECchHHHHHHHHHHh--hccch-----------------------------------hhhhccc-
Confidence 98764 554 7778887 221111000 00000 0011123
Q ss_pred CCCCeEEEEEeecCC---CCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHH
Q 014316 255 PNRPALVVSSTSWTP---DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 331 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~---~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~ 331 (427)
++++.++++.|+... .|+++.+++|++.+.+ . ++.+++.|+++..+.+
T Consensus 196 ~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~----------------------------~-~~~vi~~~~~~~~~~l 246 (363)
T cd03786 196 LPKKYILVTLHRVENVDDGEQLEEILEALAELAE----------------------------E-DVPVVFPNHPRTRPRI 246 (363)
T ss_pred CCCCEEEEEeCCccccCChHHHHHHHHHHHHHHh----------------------------c-CCEEEEECCCChHHHH
Confidence 334557788888775 7999999999998753 1 5788888888888899
Q ss_pred HHHHHHcCC--CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec-cCccccceecCCc
Q 014316 332 EEKIRRLRL--KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVKVDKN 408 (427)
Q Consensus 332 ~~~~~~l~l--~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~-~~g~~e~v~~~~~ 408 (427)
++.++++++ ++|.|+|. ...+++..+|+.||++|.+ |. + .+.|||++|+|||+++ .++.++.+++|.
T Consensus 247 ~~~~~~~~~~~~~v~~~~~-~~~~~~~~l~~~ad~~v~~---Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g~- 316 (363)
T cd03786 247 REAGLEFLGHHPNVLLISP-LGYLYFLLLLKNADLVLTD---SG----G-IQEEASFLGVPVLNLRDRTERPETVESGT- 316 (363)
T ss_pred HHHHHhhccCCCCEEEECC-cCHHHHHHHHHcCcEEEEc---Cc----c-HHhhhhhcCCCEEeeCCCCccchhhheee-
Confidence 999888875 58999997 7789999999999999985 32 2 5789999999999997 455667775543
Q ss_pred EEEe-CChHHHHHHHHHh
Q 014316 409 GLLF-SSSSELADQLLVN 425 (427)
Q Consensus 409 G~l~-~~~~~la~~l~~~ 425 (427)
++++ ++.++++++|.++
T Consensus 317 ~~~~~~~~~~i~~~i~~l 334 (363)
T cd03786 317 NVLVGTDPEAILAAIEKL 334 (363)
T ss_pred EEecCCCHHHHHHHHHHH
Confidence 3444 4689999998775
No 80
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.80 E-value=5.2e-18 Score=172.37 Aligned_cols=233 Identities=17% Similarity=0.195 Sum_probs=152.9
Q ss_pred hhCCCcEEEEcCCCCh--hHHHHHHHHH--hhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEc
Q 014316 98 KIASPDVFLVQNPPSV--PTLVAVKWAS--SLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCV 173 (427)
Q Consensus 98 ~~~~~Dvv~~~~p~~~--~~~~~~~~~~--~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~v 173 (427)
+..+||+||++.|... +..+ +.... ...++|++..++|+ +.. . ..++.+.+|.++++
T Consensus 97 ~~~~pDvIi~thp~~~~~~~~~-l~~~~~~~~~~~p~~~~~tD~-~~~--------~---------~~w~~~~~d~~~~~ 157 (382)
T PLN02605 97 MKYKPDIIVSVHPLMQHVPLRV-LRWQGKELGKKIPFTTVVTDL-GTC--------H---------PTWFHKGVTRCFCP 157 (382)
T ss_pred HhcCcCEEEEeCcCcccCHHHH-HHHHhhccCCCCCEEEEECCC-CCc--------C---------cccccCCCCEEEEC
Confidence 3479999999764322 2212 11111 12478988888777 210 0 12445789999999
Q ss_pred CHHHHHHHHHhhCCe---EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccc
Q 014316 174 TQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGI 249 (427)
Q Consensus 174 S~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (427)
|+.+++.+.+. |.+ +.++.++ +.+++.+.. .+.+++.
T Consensus 158 s~~~~~~l~~~-g~~~~ki~v~g~~v~~~f~~~~~--~~~~~r~------------------------------------ 198 (382)
T PLN02605 158 SEEVAKRALKR-GLEPSQIRVYGLPIRPSFARAVR--PKDELRR------------------------------------ 198 (382)
T ss_pred CHHHHHHHHHc-CCCHHHEEEECcccCHhhccCCC--CHHHHHH------------------------------------
Confidence 99999988765 554 7777666 333332221 1222222
Q ss_pred ccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEE-EEEEeCCCCh
Q 014316 250 DVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL-FIITGKGPDK 328 (427)
Q Consensus 250 ~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~i~G~G~~~ 328 (427)
+++++++++ +|+++|+....|++..+++++..+.... ....++.+ ++++|+|+
T Consensus 199 ~~gl~~~~~-~il~~Gg~~g~~~~~~li~~l~~~~~~~-----------------------~~~~~~~~~~vi~G~~~-- 252 (382)
T PLN02605 199 ELGMDEDLP-AVLLMGGGEGMGPLEETARALGDSLYDK-----------------------NLGKPIGQVVVICGRNK-- 252 (382)
T ss_pred HcCCCCCCc-EEEEECCCcccccHHHHHHHHHHhhccc-----------------------cccCCCceEEEEECCCH--
Confidence 235555555 8889999999999999999987643100 00024454 67888774
Q ss_pred HHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEecc------Ccccc
Q 014316 329 ESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY------SCIEE 401 (427)
Q Consensus 329 ~~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~------~g~~e 401 (427)
.+++..++... .+|+|+|+ .++++++|++||++|.+ + -|++++||||||+|+|+++. |+. +
T Consensus 253 -~~~~~L~~~~~~~~v~~~G~---~~~~~~l~~aaDv~V~~---~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~-~ 320 (382)
T PLN02605 253 -KLQSKLESRDWKIPVKVRGF---VTNMEEWMGACDCIITK---A----GPGTIAEALIRGLPIILNGYIPGQEEGNV-P 320 (382)
T ss_pred -HHHHHHHhhcccCCeEEEec---cccHHHHHHhCCEEEEC---C----CcchHHHHHHcCCCEEEecCCCccchhhH-H
Confidence 22222232222 36999998 57999999999999973 2 36799999999999999983 444 3
Q ss_pred ceecCCcEEEeCChHHHHHHHHHhc
Q 014316 402 LVKVDKNGLLFSSSSELADQLLVNA 426 (427)
Q Consensus 402 ~v~~~~~G~l~~~~~~la~~l~~~~ 426 (427)
.+.+++.|++++++++++++|.++.
T Consensus 321 ~i~~~g~g~~~~~~~~la~~i~~ll 345 (382)
T PLN02605 321 YVVDNGFGAFSESPKEIARIVAEWF 345 (382)
T ss_pred HHHhCCceeecCCHHHHHHHHHHHH
Confidence 4456777888899999999998763
No 81
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.80 E-value=4.2e-17 Score=168.28 Aligned_cols=267 Identities=16% Similarity=0.089 Sum_probs=182.2
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHh----hcCCcEEEEecccchhhhhh--hcCC-CchHHHHHH----------HHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASS----LRRSAFIVDWHNFGYTLLSL--SLGR-RSHFVSIYR----------WIEKY 162 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~----~~~~p~i~~~h~~~~~~~~~--~~~~-~~~~~~~~~----------~~e~~ 162 (427)
..|||||+|+ ..+.++..+++. ...+|.|+|+|++.|.-... .... .-++ ..+. .++|.
T Consensus 129 ~~pDIvH~hD---Wqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~-~~~~~~~l~~~~~~~~lK~ 204 (487)
T COG0297 129 WLPDIVHAHD---WQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPF-EAYASFGLEFYGQISFLKG 204 (487)
T ss_pred CCCCEEEeec---HHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCH-HHhhhceeeecCcchhhhh
Confidence 4799999999 777776667766 55889999999987622110 0000 0000 0111 34455
Q ss_pred HhccCCEEEEcCHHHHHHHH-HhhC-----------CeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccc
Q 014316 163 YGKMANGCLCVTQAMQHELA-QNWG-----------IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCV 229 (427)
Q Consensus 163 ~~~~ad~vi~vS~~~~~~l~-~~~~-----------~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (427)
....||.|.+||....+++. ..+| .+..-|.|| |.+.+.|-........|..
T Consensus 205 gi~~ad~vttVSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~--------------- 269 (487)
T COG0297 205 GLYYADAVTTVSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSA--------------- 269 (487)
T ss_pred hheeccEEEEECHHHHHhhccccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCc---------------
Confidence 55689999999999988876 2222 126778888 7666655432111000000
Q ss_pred cCCCCCCCccchhhhcccccccccCCC-CCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcC
Q 014316 230 SNGMEGQKADETIFTSLAGIDVFLKPN-RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISD 308 (427)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (427)
+...++..+... +...++++.+ ...++.++||+..+||++.+++++..+.+.
T Consensus 270 ----~~~~~k~~nk~~-L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~---------------------- 322 (487)
T COG0297 270 ----EVLPAKAENKVA-LQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQ---------------------- 322 (487)
T ss_pred ----cchhhhHHHHHH-HHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHh----------------------
Confidence 000001111111 3334455533 224999999999999999999999999876
Q ss_pred CcccCCCCEEEEEEeCCC--ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHc
Q 014316 309 GKQYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFG 386 (427)
Q Consensus 309 ~~~~~~~~~~l~i~G~G~--~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama 386 (427)
.+++++.|.|+ .++.+..+++++.. ++.+.. |.+..-...+++.+|++++| |..|+||++-++||.
T Consensus 323 -------~~~~vilG~gd~~le~~~~~la~~~~~-~~~~~i-~~~~~la~~i~agaD~~lmP---SrfEPcGL~ql~amr 390 (487)
T COG0297 323 -------GWQLVLLGTGDPELEEALRALASRHPG-RVLVVI-GYDEPLAHLIYAGADVILMP---SRFEPCGLTQLYAMR 390 (487)
T ss_pred -------CceEEEEecCcHHHHHHHHHHHHhcCc-eEEEEe-eecHHHHHHHHhcCCEEEeC---CcCcCCcHHHHHHHH
Confidence 49999999992 12344455555432 344433 47888899999999999998 999999999999999
Q ss_pred CCCcEEEeccCccccceec--------CCcEEEe--CChHHHHHHHHH
Q 014316 387 CGLPVCAVSYSCIEELVKV--------DKNGLLF--SSSSELADQLLV 424 (427)
Q Consensus 387 ~G~PVIas~~~g~~e~v~~--------~~~G~l~--~~~~~la~~l~~ 424 (427)
.|++.|+..+||.+|.|.+ ..+|+++ .++++++.+|.+
T Consensus 391 yGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~r 438 (487)
T COG0297 391 YGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRR 438 (487)
T ss_pred cCCcceEcccCCccceecCccchhccCceeEEEEecCCHHHHHHHHHH
Confidence 9999999999999999975 5789999 567999999875
No 82
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.78 E-value=2.3e-17 Score=166.38 Aligned_cols=239 Identities=15% Similarity=0.085 Sum_probs=155.1
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchH-HHHHHHHHHHHhccCCEEEEcCHHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHF-VSIYRWIEKYYGKMANGCLCVTQAM 177 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (427)
..+||+||+|+.+ ...+.+.++++..++|++...++. .+ .+...++ ... ..+.+.+.+|.++++|+..
T Consensus 84 ~~~pDiv~~~gd~--~~~la~a~aa~~~~ipv~h~~~g~-~s-----~~~~~~~~~~~---~r~~~~~~ad~~~~~s~~~ 152 (365)
T TIGR00236 84 EEKPDIVLVQGDT--TTTLAGALAAFYLQIPVGHVEAGL-RT-----GDRYSPMPEEI---NRQLTGHIADLHFAPTEQA 152 (365)
T ss_pred HcCCCEEEEeCCc--hHHHHHHHHHHHhCCCEEEEeCCC-Cc-----CCCCCCCccHH---HHHHHHHHHHhccCCCHHH
Confidence 3889999999743 334447788888999986543332 10 0111111 111 1123345689999999999
Q ss_pred HHHHHHhhCCe---EEEecCCC-CCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccccccc
Q 014316 178 QHELAQNWGIK---ATVLYDQP-PEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFL 253 (427)
Q Consensus 178 ~~~l~~~~~~~---~~vi~n~~-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (427)
++.+.+. |.+ +.+++|+- ...+.+.......+++ +++.
T Consensus 153 ~~~l~~~-G~~~~~I~vign~~~d~~~~~~~~~~~~~~~------------------------------------~~~~- 194 (365)
T TIGR00236 153 KDNLLRE-NVKADSIFVTGNTVIDALLTNVEIAYSSPVL------------------------------------SEFG- 194 (365)
T ss_pred HHHHHHc-CCCcccEEEeCChHHHHHHHHHhhccchhHH------------------------------------HhcC-
Confidence 9999775 554 78889882 1111111000001111 1111
Q ss_pred CCCCCeEEEEEeec-CCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHH
Q 014316 254 KPNRPALVVSSTSW-TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 332 (427)
Q Consensus 254 ~~~~~~~i~~~g~~-~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~ 332 (427)
.+++.+++..+|. ...|+++.+++|+.++.+. .|+++++++|.+.. +..+
T Consensus 195 -~~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~---------------------------~~~~~~vi~~~~~~-~~~~ 245 (365)
T TIGR00236 195 -EDKRYILLTLHRRENVGEPLENIFKAIREIVEE---------------------------FEDVQIVYPVHLNP-VVRE 245 (365)
T ss_pred -CCCCEEEEecCchhhhhhHHHHHHHHHHHHHHH---------------------------CCCCEEEEECCCCh-HHHH
Confidence 2234334433343 3458999999999998765 67888888865432 2222
Q ss_pred HHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe-ccCccccceecCCcEE
Q 014316 333 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SYSCIEELVKVDKNGL 410 (427)
Q Consensus 333 ~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas-~~~g~~e~v~~~~~G~ 410 (427)
++.+.++. ++|.|++. ++..++..+++.+|+++.+ | |..++|||+||+|||++ ++|+..|++.++ .++
T Consensus 246 ~~~~~~~~~~~v~~~~~-~~~~~~~~~l~~ad~vv~~---S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~ 315 (365)
T TIGR00236 246 PLHKHLGDSKRVHLIEP-LEYLDFLNLAANSHLILTD---S-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNK 315 (365)
T ss_pred HHHHHhCCCCCEEEECC-CChHHHHHHHHhCCEEEEC---C-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceE
Confidence 34444555 48999998 8888999999999999864 3 44689999999999997 678888888755 555
Q ss_pred Ee-CChHHHHHHHHHh
Q 014316 411 LF-SSSSELADQLLVN 425 (427)
Q Consensus 411 l~-~~~~~la~~l~~~ 425 (427)
++ .|+++++++|.++
T Consensus 316 lv~~d~~~i~~ai~~l 331 (365)
T TIGR00236 316 LVGTDKENITKAAKRL 331 (365)
T ss_pred EeCCCHHHHHHHHHHH
Confidence 66 6889999998775
No 83
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.78 E-value=2.3e-17 Score=166.81 Aligned_cols=311 Identities=17% Similarity=0.143 Sum_probs=177.7
Q ss_pred eEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHH
Q 014316 6 RACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPL 85 (427)
Q Consensus 6 ~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (427)
+++| +.|+.|+.---...+.+|.+. ++++.+++..+.. ..+..-..++..+.++ . ..+ ...+..+.+.+
T Consensus 3 ki~i-~~Ggt~G~i~~a~l~~~L~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~--~---~g~---~~~~~~~~~~~ 71 (380)
T PRK00025 3 RIAI-VAGEVSGDLLGAGLIRALKAR-APNLEFVGVGGPR-MQAAGCESLFDMEELA--V---MGL---VEVLPRLPRLL 71 (380)
T ss_pred eEEE-EecCcCHHHHHHHHHHHHHhc-CCCcEEEEEccHH-HHhCCCccccCHHHhh--h---ccH---HHHHHHHHHHH
Confidence 3444 444444322222356666664 7899999865432 2211111233333333 1 111 11122222222
Q ss_pred HHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhc
Q 014316 86 IQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGK 165 (427)
Q Consensus 86 ~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 165 (427)
.....+ ..++ +..+||+||++..+.++..+ + ..++..++|+++..++..|. . .. . .. +.+.+
T Consensus 72 ~~~~~~-~~~l-~~~kPdivi~~~~~~~~~~~-a-~~a~~~~ip~i~~~~~~~~~-----~-~~---~----~~-~~~~~ 133 (380)
T PRK00025 72 KIRRRL-KRRL-LAEPPDVFIGIDAPDFNLRL-E-KKLRKAGIPTIHYVSPSVWA-----W-RQ---G----RA-FKIAK 133 (380)
T ss_pred HHHHHH-HHHH-HHcCCCEEEEeCCCCCCHHH-H-HHHHHCCCCEEEEeCCchhh-----c-Cc---h----HH-HHHHH
Confidence 211111 1112 34799999998743333322 2 33455699998876654220 0 00 0 11 12356
Q ss_pred cCCEEEEcCHHHHHHHHHhhCCeEEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhc
Q 014316 166 MANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTS 245 (427)
Q Consensus 166 ~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (427)
.+|.+++.|+..++.+.+ +|.++.++.|.-.+...... .+....
T Consensus 134 ~~d~i~~~~~~~~~~~~~-~g~~~~~~G~p~~~~~~~~~--~~~~~~--------------------------------- 177 (380)
T PRK00025 134 ATDHVLALFPFEAAFYDK-LGVPVTFVGHPLADAIPLLP--DRAAAR--------------------------------- 177 (380)
T ss_pred HHhhheeCCccCHHHHHh-cCCCeEEECcCHHHhccccc--ChHHHH---------------------------------
Confidence 789999999998888765 46665555444111111111 111111
Q ss_pred ccccccccCCCCCeEEEEEee-cCCC-CCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEe
Q 014316 246 LAGIDVFLKPNRPALVVSSTS-WTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG 323 (427)
Q Consensus 246 ~~~~~~~~~~~~~~~i~~~g~-~~~~-K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G 323 (427)
.+++.+++++.++++.|+ .... +.++.+++|++.+.++ .|+++++++|
T Consensus 178 ---~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~---------------------------~~~~~~ii~~ 227 (380)
T PRK00025 178 ---ARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQR---------------------------YPDLRFVLPL 227 (380)
T ss_pred ---HHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHh---------------------------CCCeEEEEec
Confidence 122444555544555553 3333 4478899999988765 6889999998
Q ss_pred C-CCChHHHHHHHHHc-CCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe-------
Q 014316 324 K-GPDKESYEEKIRRL-RLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV------- 394 (427)
Q Consensus 324 ~-G~~~~~~~~~~~~l-~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas------- 394 (427)
+ ++..+++++.++++ ++. +.+. .+++..+|+.||++|++ | |...+|||++|+|+|++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~-v~~~-----~~~~~~~~~~aDl~v~~---s-----G~~~lEa~a~G~PvI~~~~~~~~~ 293 (380)
T PRK00025 228 VNPKRREQIEEALAEYAGLE-VTLL-----DGQKREAMAAADAALAA---S-----GTVTLELALLKVPMVVGYKVSPLT 293 (380)
T ss_pred CChhhHHHHHHHHhhcCCCC-eEEE-----cccHHHHHHhCCEEEEC---c-----cHHHHHHHHhCCCEEEEEccCHHH
Confidence 6 66667788877776 553 4442 35899999999999985 3 66888999999999987
Q ss_pred ----------ccCccccceecCC--cEEEe--CChHHHHHHHHHh
Q 014316 395 ----------SYSCIEELVKVDK--NGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 395 ----------~~~g~~e~v~~~~--~G~l~--~~~~~la~~l~~~ 425 (427)
+.+++++++.++. .+++. .+++++++.+.++
T Consensus 294 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l 338 (380)
T PRK00025 294 FWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPL 338 (380)
T ss_pred HHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHH
Confidence 4566677776654 44555 4578899888765
No 84
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.74 E-value=3.1e-16 Score=159.95 Aligned_cols=223 Identities=12% Similarity=0.173 Sum_probs=146.6
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHH-HhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWA-SSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~-~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (427)
..+||+|+++.|. + .++.+. ++..++|++...+|+.. . ..|+.+.+|.+++.|+.+
T Consensus 102 ~~kPDvVi~~~p~--~--~~~~l~~~~~~~iP~~~v~td~~~-------~------------~~w~~~~~d~~~v~s~~~ 158 (391)
T PRK13608 102 KEKPDLILLTFPT--P--VMSVLTEQFNINIPVATVMTDYRL-------H------------KNWITPYSTRYYVATKET 158 (391)
T ss_pred HhCcCEEEECCcH--H--HHHHHHHhcCCCCCEEEEeCCCCc-------c------------cccccCCCCEEEECCHHH
Confidence 4899999998642 2 212222 23458897654444411 0 013457899999999999
Q ss_pred HHHHHHhhCCe---EEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccC
Q 014316 178 QHELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (427)
Q Consensus 178 ~~~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (427)
++.+.+. |.+ +.++.++....|.... .+.+.+ .+++++
T Consensus 159 ~~~l~~~-gi~~~ki~v~GiPv~~~f~~~~--~~~~~~------------------------------------~~~~l~ 199 (391)
T PRK13608 159 KQDFIDV-GIDPSTVKVTGIPIDNKFETPI--DQKQWL------------------------------------IDNNLD 199 (391)
T ss_pred HHHHHHc-CCCHHHEEEECeecChHhcccc--cHHHHH------------------------------------HHcCCC
Confidence 9998764 554 6665554223333211 111111 122455
Q ss_pred CCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEE-eCCCChHHHHH
Q 014316 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGPDKESYEE 333 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~-G~G~~~~~~~~ 333 (427)
++++.++++.|++...|+++.+++++.. . .++++++++ |+++ +..++
T Consensus 200 ~~~~~ilv~~G~lg~~k~~~~li~~~~~---~---------------------------~~~~~~vvv~G~~~--~l~~~ 247 (391)
T PRK13608 200 PDKQTILMSAGAFGVSKGFDTMITDILA---K---------------------------SANAQVVMICGKSK--ELKRS 247 (391)
T ss_pred CCCCEEEEECCCcccchhHHHHHHHHHh---c---------------------------CCCceEEEEcCCCH--HHHHH
Confidence 6667678889999999999999998632 1 457888655 4442 22233
Q ss_pred HHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec-cCc----cccceecCC
Q 014316 334 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSC----IEELVKVDK 407 (427)
Q Consensus 334 ~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~-~~g----~~e~v~~~~ 407 (427)
+.+.++. ++|.|+|+ .++++++|+.||++|+. +.|+++.||||+|+|+|+++ .+| ...++.+.+
T Consensus 248 l~~~~~~~~~v~~~G~---~~~~~~~~~~aDl~I~k-------~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G 317 (391)
T PRK13608 248 LTAKFKSNENVLILGY---TKHMNEWMASSQLMITK-------PGGITISEGLARCIPMIFLNPAPGQELENALYFEEKG 317 (391)
T ss_pred HHHHhccCCCeEEEec---cchHHHHHHhhhEEEeC-------CchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCC
Confidence 3333433 47999998 58999999999999951 24779999999999999996 444 223445667
Q ss_pred cEEEeCChHHHHHHHHHh
Q 014316 408 NGLLFSSSSELADQLLVN 425 (427)
Q Consensus 408 ~G~l~~~~~~la~~l~~~ 425 (427)
.|+..++.++++++|.++
T Consensus 318 ~g~~~~~~~~l~~~i~~l 335 (391)
T PRK13608 318 FGKIADTPEEAIKIVASL 335 (391)
T ss_pred cEEEeCCHHHHHHHHHHH
Confidence 788889999999988765
No 85
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.72 E-value=3.5e-17 Score=140.98 Aligned_cols=129 Identities=27% Similarity=0.413 Sum_probs=95.6
Q ss_pred eEEEEEeecCCCCCHHHHHH-HHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHHHH
Q 014316 259 ALVVSSTSWTPDEDFGILLE-AALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRR 337 (427)
Q Consensus 259 ~~i~~~g~~~~~K~~~~Li~-a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~~~ 337 (427)
.+|++.|++.+.|+++.+++ ++..+.++ .|+++|.|+|.+++ +++++
T Consensus 3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~~---------------------------~p~~~l~i~G~~~~--~l~~~--- 50 (135)
T PF13692_consen 3 LYIGYLGRIRPDKGLEELIEAALERLKEK---------------------------HPDIELIIIGNGPD--ELKRL--- 50 (135)
T ss_dssp EEEE--S-SSGGGTHHHHHH-HHHHHHHH---------------------------STTEEEEEECESS---HHCCH---
T ss_pred ccccccccccccccccchhhhHHHHHHHH---------------------------CcCEEEEEEeCCHH--HHHHh---
Confidence 48999999999999999999 99999887 79999999999876 24333
Q ss_pred cCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe-CChH
Q 014316 338 LRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF-SSSS 416 (427)
Q Consensus 338 l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~-~~~~ 416 (427)
..++|+|+|. + +++.++++.||++++|. ...+++|.+++|||++|+|||+++. +..+++.....|+++ ++++
T Consensus 51 -~~~~v~~~g~-~--~e~~~~l~~~dv~l~p~--~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~~~~~~ 123 (135)
T PF13692_consen 51 -RRPNVRFHGF-V--EELPEILAAADVGLIPS--RFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLVANDPE 123 (135)
T ss_dssp -HHCTEEEE-S----HHHHHHHHC-SEEEE-B--SS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE-TT-HH
T ss_pred -cCCCEEEcCC-H--HHHHHHHHhCCEEEEEe--eCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEECCCHH
Confidence 1248999998 5 78999999999999973 2346899999999999999999999 677777666677666 7889
Q ss_pred HHHHHHHHhc
Q 014316 417 ELADQLLVNA 426 (427)
Q Consensus 417 ~la~~l~~~~ 426 (427)
+++++|.++.
T Consensus 124 ~l~~~i~~l~ 133 (135)
T PF13692_consen 124 ELAEAIERLL 133 (135)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998864
No 86
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.71 E-value=5.9e-15 Score=141.99 Aligned_cols=251 Identities=20% Similarity=0.287 Sum_probs=174.7
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccch-hhhhhhc---CCC-------chHHHHHHHHHHHHhccCC
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGY-TLLSLSL---GRR-------SHFVSIYRWIEKYYGKMAN 168 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~-~~~~~~~---~~~-------~~~~~~~~~~e~~~~~~ad 168 (427)
..||+.+=.- .++.. ...++++.++|++..+|...- +.+-.++ ... -.+++++..+.+..+..||
T Consensus 149 ~~Pdi~IDtM--GY~fs--~p~~r~l~~~~V~aYvHYP~iS~DML~~l~qrq~s~~l~~~KlaY~rlFa~lY~~~G~~ad 224 (465)
T KOG1387|consen 149 FPPDIFIDTM--GYPFS--YPIFRRLRRIPVVAYVHYPTISTDMLKKLFQRQKSGILVWGKLAYWRLFALLYQSAGSKAD 224 (465)
T ss_pred CCchheEecC--CCcch--hHHHHHHccCceEEEEecccccHHHHHHHHhhhhcchhhhHHHHHHHHHHHHHHhccccce
Confidence 6899865442 22222 234566889999999995422 1111111 111 1123445556777888999
Q ss_pred EEEEcCHHHHHHHHHhhCCe-EEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccc
Q 014316 169 GCLCVTQAMQHELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLA 247 (427)
Q Consensus 169 ~vi~vS~~~~~~l~~~~~~~-~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (427)
.+.+.|..+++++.+-|+.. ..++| +|++.++-.+.+
T Consensus 225 ~vm~NssWT~nHI~qiW~~~~~~iVy-------PPC~~e~lks~~----------------------------------- 262 (465)
T KOG1387|consen 225 IVMTNSSWTNNHIKQIWQSNTCSIVY-------PPCSTEDLKSKF----------------------------------- 262 (465)
T ss_pred EEEecchhhHHHHHHHhhccceeEEc-------CCCCHHHHHHHh-----------------------------------
Confidence 99999999999999999775 55554 344433222211
Q ss_pred ccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCC
Q 014316 248 GIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD 327 (427)
Q Consensus 248 ~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~ 327 (427)
+-..++...++++|.+.|+|++. +++.++.+..+... + ...++++|+|+|....
T Consensus 263 ----~te~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl-------------------~--a~~~~iKL~ivGScRn 316 (465)
T KOG1387|consen 263 ----GTEGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPL-------------------E--ASVSPIKLIIVGSCRN 316 (465)
T ss_pred ----cccCCcceEEEEEeecCcccccH-HHHHHHHHHhcCch-------------------h--hccCCceEEEEeccCC
Confidence 11234456899999999999999 77777766554100 0 1235699999996543
Q ss_pred hH------HHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc-c
Q 014316 328 KE------SYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC-I 399 (427)
Q Consensus 328 ~~------~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g-~ 399 (427)
++ .++.++++|.++ +|.|.-. ++.+++-.+|+.|.++|.. -..|.||+.++||||+|+-.|+.+.|| .
T Consensus 317 eeD~ervk~Lkd~a~~L~i~~~v~F~~N-~Py~~lv~lL~~a~iGvh~---MwNEHFGIsVVEyMAAGlIpi~h~SgGP~ 392 (465)
T KOG1387|consen 317 EEDEERVKSLKDLAEELKIPKHVQFEKN-VPYEKLVELLGKATIGVHT---MWNEHFGISVVEYMAAGLIPIVHNSGGPL 392 (465)
T ss_pred hhhHHHHHHHHHHHHhcCCccceEEEec-CCHHHHHHHhccceeehhh---hhhhhcchhHHHHHhcCceEEEeCCCCCc
Confidence 32 356778889995 7999888 9999999999999999973 455999999999999999888887665 4
Q ss_pred ccceec---CCcEEEeCChHHHHHHHHHhc
Q 014316 400 EELVKV---DKNGLLFSSSSELADQLLVNA 426 (427)
Q Consensus 400 ~e~v~~---~~~G~l~~~~~~la~~l~~~~ 426 (427)
-|+|.+ ..+||+..+.++.|+++.++.
T Consensus 393 lDIV~~~~G~~tGFla~t~~EYaE~iLkIv 422 (465)
T KOG1387|consen 393 LDIVTPWDGETTGFLAPTDEEYAEAILKIV 422 (465)
T ss_pred eeeeeccCCccceeecCChHHHHHHHHHHH
Confidence 566654 347999999999999988753
No 87
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.71 E-value=1.1e-15 Score=167.92 Aligned_cols=246 Identities=11% Similarity=0.075 Sum_probs=163.8
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHh-hcCCcEEEEecccchhh-hhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTL-LSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~-~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (427)
..-|+|-+|. +...++..++.. ..+.++-+.+|-. |+. .-++.-..+ ..+ ++-++ .||.|-+.|...
T Consensus 146 ~~~d~vWvhD---YhL~llp~~lR~~~~~~~igfFlHiP-FPs~e~fr~lp~r--~~i---l~gll--~aDligF~t~~y 214 (797)
T PLN03063 146 EEGDVVWCHD---YHLMFLPQYLKEYNNKMKVGWFLHTP-FPSSEIYKTLPSR--SEL---LRAVL--TADLIGFHTYDF 214 (797)
T ss_pred CCCCEEEEec---chhhhHHHHHHHhCCCCcEEEEecCC-CCCHHHHhhCCCH--HHH---HHHHh--cCCEEEeCCHHH
Confidence 4568999999 555555555544 4577888888876 411 111100000 111 11122 478887777777
Q ss_pred HHHHHHh----------------hCC--eEEEecCC-CCCCcCCCC--hHHHHHHHhhhhhcccCCCCccccccCCCCCC
Q 014316 178 QHELAQN----------------WGI--KATVLYDQ-PPEFFHPTS--LEEKHELFCRLNKILHQPLGVQDCVSNGMEGQ 236 (427)
Q Consensus 178 ~~~l~~~----------------~~~--~~~vi~n~-~~~~f~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (427)
.+++.+. .|. ++.++||| |.+.|.+.. ++.+.. ...+
T Consensus 215 ~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~-~~~l--------------------- 272 (797)
T PLN03063 215 ARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQH-MKEL--------------------- 272 (797)
T ss_pred HHHHHHHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHH-HHHH---------------------
Confidence 7666431 111 27789999 777665432 111111 0000
Q ss_pred CccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCC
Q 014316 237 KADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR 316 (427)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (427)
++ ...++ .+|+++||+.+.||+..+++|++.+.++ +|+
T Consensus 273 -----------r~---~~~~~-~lIl~VgRLd~~KGi~~lL~Afe~lL~~---------------------------~P~ 310 (797)
T PLN03063 273 -----------KR---FFAGR-KVILGVDRLDMIKGIPQKYLAFEKFLEE---------------------------NPE 310 (797)
T ss_pred -----------HH---hcCCC-eEEEEecccccccCHHHHHHHHHHHHHh---------------------------Ccc
Confidence 00 01123 4899999999999999999999998876 676
Q ss_pred E----EEEEE-----eCCCChHHHHHHHHHcC--C---------CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCC
Q 014316 317 L----LFIIT-----GKGPDKESYEEKIRRLR--L---------KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLD 376 (427)
Q Consensus 317 ~----~l~i~-----G~G~~~~~~~~~~~~l~--l---------~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~ 376 (427)
+ .|+.+ |+|+..+++++.++++. + .-|.+++..++.+++.++|+.||++|+| |.+||
T Consensus 311 ~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvt---SlrEG 387 (797)
T PLN03063 311 WRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVT---SLRDG 387 (797)
T ss_pred ccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeC---ccccc
Confidence 5 34433 34555566766676653 2 1244555448999999999999999997 88999
Q ss_pred CchHHHHHHcCCCc----EEEeccCccccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 377 LPMKVVDMFGCGLP----VCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 377 ~p~~~lEama~G~P----VIas~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
++++++||||||+| +|.|..+|..+.+ +.+|+++ .|++++|++|.++
T Consensus 388 mnLv~lEamA~g~p~~gvlVlSe~~G~~~~l--~~~allVnP~D~~~lA~AI~~a 440 (797)
T PLN03063 388 MNLVSYEFVACQKAKKGVLVLSEFAGAGQSL--GAGALLVNPWNITEVSSAIKEA 440 (797)
T ss_pred cCcchhhHheeecCCCCCEEeeCCcCchhhh--cCCeEEECCCCHHHHHHHHHHH
Confidence 99999999999999 9999999998876 5679999 5789999998764
No 88
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.71 E-value=3.5e-15 Score=143.57 Aligned_cols=247 Identities=24% Similarity=0.305 Sum_probs=171.5
Q ss_pred CcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCC-CchHH-HHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 102 PDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGR-RSHFV-SIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 102 ~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~-~~~~~-~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
+|+++.+..................+.+.+..+|+............ ..... ....+.........+.+++.+.....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLLLKRLKKALRLLADRVIAVSPALKE 163 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccchhhHHHHHHHHHHHHHhccccccEEEECCHHHHH
Confidence 59999876433332222344455567888888888733111110001 01111 11112222222247889999988866
Q ss_pred HHHHhhCC-eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCC
Q 014316 180 ELAQNWGI-KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNR 257 (427)
Q Consensus 180 ~l~~~~~~-~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (427)
.+...+.. +..+++|+ +.+.+.+.. .......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~ 197 (381)
T COG0438 164 LLEALGVPNKIVVIPNGIDTEKFAPAR----------------------------------------------IGLLPEG 197 (381)
T ss_pred HHHHhCCCCCceEecCCcCHHHcCccc----------------------------------------------cCCCccc
Confidence 66554433 36677777 444443210 0111111
Q ss_pred -CeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCC-hHHHHHHH
Q 014316 258 -PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD-KESYEEKI 335 (427)
Q Consensus 258 -~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~-~~~~~~~~ 335 (427)
...++++|++.+.||++.+++++..+.+. .+++.+.++|.|+. .+.+.+.+
T Consensus 198 ~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~---------------------------~~~~~~~~~g~~~~~~~~~~~~~ 250 (381)
T COG0438 198 GKFVVLYVGRLDPEKGLDLLIEAAAKLKKR---------------------------GPDIKLVIVGDGPERREELEKLA 250 (381)
T ss_pred CceEEEEeeccChhcCHHHHHHHHHHhhhh---------------------------cCCeEEEEEcCCCccHHHHHHHH
Confidence 25899999999999999999999999876 55689999999987 36777788
Q ss_pred HHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEeC-
Q 014316 336 RRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS- 413 (427)
Q Consensus 336 ~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~~- 413 (427)
++++. ++|.|+|. ++.+++..+++.+|++++| |..|++|++++|||++|+|||+++.++..|++.++.+|+++.
T Consensus 251 ~~~~~~~~v~~~g~-~~~~~~~~~~~~~~~~v~p---s~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~ 326 (381)
T COG0438 251 KKLGLEDNVKFLGY-VPDEELAELLASADVFVLP---SLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPP 326 (381)
T ss_pred HHhCCCCcEEEecc-cCHHHHHHHHHhCCEEEec---cccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCC
Confidence 88876 57999886 8878899999999999997 555999999999999999999999999999998887888663
Q ss_pred -ChHHHHHHHHHh
Q 014316 414 -SSSELADQLLVN 425 (427)
Q Consensus 414 -~~~~la~~l~~~ 425 (427)
+.+++++++..+
T Consensus 327 ~~~~~~~~~i~~~ 339 (381)
T COG0438 327 GDVEELADALEQL 339 (381)
T ss_pred CCHHHHHHHHHHH
Confidence 478999988765
No 89
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.68 E-value=3.4e-15 Score=152.42 Aligned_cols=262 Identities=19% Similarity=0.167 Sum_probs=163.7
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcC----CcEEEEecccchhhhhhhcCCCch-HHHHHHHHHHHHhccCCEEEEcC
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRR----SAFIVDWHNFGYTLLSLSLGRRSH-FVSIYRWIEKYYGKMANGCLCVT 174 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~----~p~i~~~h~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~ad~vi~vS 174 (427)
.+.|.++... . ....++...+.+ +++.+++|.. -..+..+.+-... ......++|......+|.+++.|
T Consensus 144 ~~~d~~i~d~---~--~~~~~l~~~~~~p~~~~~i~~~~h~~-~~lla~r~g~~~~l~~~~l~~~e~e~~~~~~~~~~ns 217 (495)
T KOG0853|consen 144 EKVDPIIEDF---V--SACVPLLKQLSGPDVIIKIYFYCHFP-DSLLAKRLGVLKVLYRHALDKIEEETTGLAWKILVNS 217 (495)
T ss_pred hhhceeecch---H--HHHHHHHHHhcCCcccceeEEeccch-HHHhccccCccceeehhhhhhhhhhhhhccceEecch
Confidence 5678887765 2 222344455553 4566677765 3344333322222 23334566666777899999999
Q ss_pred HHHHHHHHHhh---CCe-EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccc
Q 014316 175 QAMQHELAQNW---GIK-ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGI 249 (427)
Q Consensus 175 ~~~~~~l~~~~---~~~-~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (427)
......++..+ +.. +.+.|-. +.+.+.+.. .+. ...|+...+.
T Consensus 218 ~~~~~~f~~~~~~L~~~d~~~~y~ei~~s~~~~~~-~~~-------------------------------~~~~~~~~r~ 265 (495)
T KOG0853|consen 218 YFTKRQFKATFVSLSNSDITSTYPEIDGSWFTYGQ-YES-------------------------------HLELRLPVRL 265 (495)
T ss_pred hhhhhhhhhhhhhcCCCCcceeeccccchhccccc-ccc-------------------------------chhcccccce
Confidence 99988776542 111 2222222 222221100 000 0011111111
Q ss_pred ccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeC-CCC-
Q 014316 250 DVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK-GPD- 327 (427)
Q Consensus 250 ~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~-G~~- 327 (427)
...... ....+..+.++.|.||+..+++|+.++... |.+ ...++.++.++|+ |.+
T Consensus 266 ~~~v~~-~d~~~~siN~~~pgkd~~l~l~a~~~~~~~-------------------i~~---~~~~~~hl~~~g~~G~d~ 322 (495)
T KOG0853|consen 266 YRGVSG-IDRFFPSINRFEPGKDQDLALPAFTLLHDS-------------------IPE---PSISSEHLVVAGSRGYDE 322 (495)
T ss_pred eeeecc-cceEeeeeeecCCCCCceeehhhHHhhhcc-------------------cCC---CCCCceEEEEecCCCccc
Confidence 112222 234778889999999999999999998765 111 2456788888883 211
Q ss_pred --------hHHHHHHHHHcCC--CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC
Q 014316 328 --------KESYEEKIRRLRL--KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 328 --------~~~~~~~~~~l~l--~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~ 397 (427)
..++.++++++++ +.|.|+.. ..+...++..+|..+.... +.+|.||++.+||||||+||+||+.|
T Consensus 323 ~~sen~~~~~el~~lie~~~l~g~~v~~~~s---~~~~~~yrl~adt~~v~~q-Pa~E~FGiv~IEAMa~glPvvAt~~G 398 (495)
T KOG0853|consen 323 RDSENVEYLKELLSLIEEYDLLGQFVWFLPS---TTRVAKYRLAADTKGVLYQ-PANEHFGIVPIEAMACGLPVVATNNG 398 (495)
T ss_pred cchhhHHHHHHHHHHHHHhCccCceEEEecC---CchHHHHHHHHhcceEEec-CCCCCccceeHHHHhcCCCEEEecCC
Confidence 1356778899988 35888776 4444446666666655333 44499999999999999999999999
Q ss_pred ccccceecCCcEEEeCCh-H---HHHHHHHHhc
Q 014316 398 CIEELVKVDKNGLLFSSS-S---ELADQLLVNA 426 (427)
Q Consensus 398 g~~e~v~~~~~G~l~~~~-~---~la~~l~~~~ 426 (427)
|..|+|.++.+|++++.. + .+|++|.++.
T Consensus 399 GP~EiV~~~~tG~l~dp~~e~~~~~a~~~~kl~ 431 (495)
T KOG0853|consen 399 GPAEIVVHGVTGLLIDPGQEAVAELADALLKLR 431 (495)
T ss_pred CceEEEEcCCcceeeCCchHHHHHHHHHHHHHh
Confidence 999999999999999543 3 5999998865
No 90
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.63 E-value=8.5e-15 Score=160.41 Aligned_cols=243 Identities=15% Similarity=0.122 Sum_probs=156.4
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhh-cCCcEEEEecccchhh-hhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTL-LSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~-~~~p~i~~~h~~~~~~-~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (427)
..-|+|-+|. +...++..++... ...++-+.+|-. |+. ..++.-..+ ..+ ++-. -.+|.|-+-+...
T Consensus 132 ~~~d~vwvhD---Yhl~l~p~~lr~~~~~~~igfFlH~p-fP~~~~f~~lp~~--~~l---l~~l--l~~Dligf~t~~~ 200 (726)
T PRK14501 132 RPGDVVWVHD---YQLMLLPAMLRERLPDARIGFFLHIP-FPSFEVFRLLPWR--EEI---LEGL--LGADLIGFHTYDY 200 (726)
T ss_pred CCCCEEEEeC---chhhhHHHHHHhhCCCCcEEEEeeCC-CCChHHHhhCCCh--HHH---HHHH--hcCCeEEeCCHHH
Confidence 4568999999 5555556666543 456777777765 311 111100000 011 1111 1467766666665
Q ss_pred HHHHHHh----h------------CC--eEEEecCC-CCCCcCCCCh--HHHHHHHhhhhhcccCCCCccccccCCCCCC
Q 014316 178 QHELAQN----W------------GI--KATVLYDQ-PPEFFHPTSL--EEKHELFCRLNKILHQPLGVQDCVSNGMEGQ 236 (427)
Q Consensus 178 ~~~l~~~----~------------~~--~~~vi~n~-~~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (427)
.+.+.+. + |. ++.++||| |.+.|.+... +.+.. ..+
T Consensus 201 ~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~-~~~---------------------- 257 (726)
T PRK14501 201 VRHFLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEE-IRR---------------------- 257 (726)
T ss_pred HHHHHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHH-HHH----------------------
Confidence 5544321 1 22 26788999 8777754321 11110 000
Q ss_pred CccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCC
Q 014316 237 KADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR 316 (427)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (427)
++ . ...++ .+|+++||+.+.||+..+++|++.+.+. +|+
T Consensus 258 ------lr----~---~~~~~-~~il~VgRl~~~Kgi~~~l~A~~~ll~~---------------------------~p~ 296 (726)
T PRK14501 258 ------LR----Q---DLRGR-KIILSIDRLDYTKGIPRRLLAFERFLEK---------------------------NPE 296 (726)
T ss_pred ------HH----H---HcCCC-EEEEEecCcccccCHHHHHHHHHHHHHh---------------------------Ccc
Confidence 00 0 11233 4899999999999999999999998876 564
Q ss_pred ----EEEEEEeC----C-CChHHHHHHHHHc----C-------CCcE-EEecCCCCcccHHHHHhcCcEEEeeccCCCCC
Q 014316 317 ----LLFIITGK----G-PDKESYEEKIRRL----R-------LKRV-AFRTMWLSAEDYPLLLGSADLGVCLHTSSSGL 375 (427)
Q Consensus 317 ----~~l~i~G~----G-~~~~~~~~~~~~l----~-------l~~V-~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e 375 (427)
++|+++|. | +..+++++.++++ + ...| .|.|. ++.+++.++|+.||++++| |.+|
T Consensus 297 ~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~-~~~~~l~~ly~~aDv~v~~---S~~E 372 (726)
T PRK14501 297 WRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRS-LPFEELVALYRAADVALVT---PLRD 372 (726)
T ss_pred ccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCC-CCHHHHHHHHHhccEEEec---cccc
Confidence 68888873 3 3334444444432 2 1224 45566 9999999999999999997 8889
Q ss_pred CCchHHHHHHcC-----CCcEEEeccCccccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 376 DLPMKVVDMFGC-----GLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 376 ~~p~~~lEama~-----G~PVIas~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
|+|++++||||| |+||++...|+..++. .|+++ .|++++|++|.++
T Consensus 373 G~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~----~~llv~P~d~~~la~ai~~~ 425 (726)
T PRK14501 373 GMNLVAKEYVASRTDGDGVLILSEMAGAAAELA----EALLVNPNDIEGIAAAIKRA 425 (726)
T ss_pred ccCcccceEEEEcCCCCceEEEecccchhHHhC----cCeEECCCCHHHHHHHHHHH
Confidence 999999999999 5577777788888875 48898 5789999998764
No 91
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.59 E-value=8.5e-14 Score=141.76 Aligned_cols=279 Identities=14% Similarity=0.088 Sum_probs=163.6
Q ss_pred EEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHH
Q 014316 10 VVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFF 89 (427)
Q Consensus 10 ~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (427)
++.|+.||.---...+.+|.++ +.++.+++.++.. ..+..-..++++..++ . ..+....+.+..+.+.+++..
T Consensus 10 i~aGgtsGhi~paal~~~l~~~-~~~~~~~g~gg~~-m~~~g~~~~~~~~~l~--v---~G~~~~l~~~~~~~~~~~~~~ 82 (385)
T TIGR00215 10 LVAGEASGDILGAGLRQQLKEH-YPNARFIGVAGPR-MAAEGCEVLYSMEELS--V---MGLREVLGRLGRLLKIRKEVV 82 (385)
T ss_pred EEeCCccHHHHHHHHHHHHHhc-CCCcEEEEEccHH-HHhCcCccccChHHhh--h---ccHHHHHHHHHHHHHHHHHHH
Confidence 3445454422222566677775 8999999866432 1211111123444443 1 112122223333333343322
Q ss_pred HHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCE
Q 014316 90 MLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANG 169 (427)
Q Consensus 90 ~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ 169 (427)
.+ + +..+||+|+..+.++++..+ ..+++..|+|+++++.--.| .. .. +--+.+.+.+|.
T Consensus 83 ~~----l-~~~kPd~vi~~g~~~~~~~~--a~aa~~~gip~v~~i~P~~w---aw---~~--------~~~r~l~~~~d~ 141 (385)
T TIGR00215 83 QL----A-KQAKPDLLVGIDAPDFNLTK--ELKKKDPGIKIIYYISPQVW---AW---RK--------WRAKKIEKATDF 141 (385)
T ss_pred HH----H-HhcCCCEEEEeCCCCccHHH--HHHHhhCCCCEEEEeCCcHh---hc---Cc--------chHHHHHHHHhH
Confidence 22 2 34899999999854444332 23566779999866421111 10 11 113455678999
Q ss_pred EEEcCHHHHHHHHHhhCCeEEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccc
Q 014316 170 CLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGI 249 (427)
Q Consensus 170 vi~vS~~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (427)
++|.++..++.+.+ .+.++.++.|+-.+.+..... .+.+.+ +
T Consensus 142 v~~~~~~e~~~~~~-~g~~~~~vGnPv~~~~~~~~~-~~~~~r------------------------------------~ 183 (385)
T TIGR00215 142 LLAILPFEKAFYQK-KNVPCRFVGHPLLDAIPLYKP-DRKSAR------------------------------------E 183 (385)
T ss_pred hhccCCCcHHHHHh-cCCCEEEECCchhhhccccCC-CHHHHH------------------------------------H
Confidence 99999998888764 467767776662122211100 111111 1
Q ss_pred ccccCCCCCeEEEEEe-ecCC-CCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEE-eCCC
Q 014316 250 DVFLKPNRPALVVSST-SWTP-DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGP 326 (427)
Q Consensus 250 ~~~~~~~~~~~i~~~g-~~~~-~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~-G~G~ 326 (427)
+++++++++.++++.| |..+ .|++..+++|++.+.+. .|++++++. +++.
T Consensus 184 ~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~---------------------------~p~~~~vi~~~~~~ 236 (385)
T TIGR00215 184 KLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQ---------------------------EPDLRRVLPVVNFK 236 (385)
T ss_pred HcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHh---------------------------CCCeEEEEEeCCch
Confidence 2244555564444444 5555 68999999999998776 788888665 4666
Q ss_pred ChHHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe
Q 014316 327 DKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 394 (427)
Q Consensus 327 ~~~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas 394 (427)
..+.+++..++++.. +|.+.+. ++..+|++||++|++ | |.+.+|+|++|+|+|.+
T Consensus 237 ~~~~~~~~~~~~~~~~~v~~~~~-----~~~~~l~aADl~V~~---S-----Gt~tlEa~a~G~P~Vv~ 292 (385)
T TIGR00215 237 RRLQFEQIKAEYGPDLQLHLIDG-----DARKAMFAADAALLA---S-----GTAALEAALIKTPMVVG 292 (385)
T ss_pred hHHHHHHHHHHhCCCCcEEEECc-----hHHHHHHhCCEEeec---C-----CHHHHHHHHcCCCEEEE
Confidence 667777777777654 5666542 567899999999986 3 66778999999999988
No 92
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.52 E-value=2.4e-13 Score=142.91 Aligned_cols=132 Identities=23% Similarity=0.279 Sum_probs=113.0
Q ss_pred CeEEEEEe--ecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh---HHHH
Q 014316 258 PALVVSST--SWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK---ESYE 332 (427)
Q Consensus 258 ~~~i~~~g--~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~---~~~~ 332 (427)
+..+++++ |+ ++|.++.+|+|+..+.+. .|++.|.+.|.|... ..++
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~---------------------------~p~~~L~~~gy~~~~~~~~~l~ 370 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILK---------------------------NPDYELKILTYNNDNDITQLLE 370 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhh---------------------------CCCeEEEEEEecCchhHHHHHH
Confidence 34688888 99 999999999999999887 899999999987543 5566
Q ss_pred HHHHHcCCC------------------------------cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHH
Q 014316 333 EKIRRLRLK------------------------------RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVV 382 (427)
Q Consensus 333 ~~~~~l~l~------------------------------~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~l 382 (427)
+++++++++ +|.|.|. .+..++.+.|..+.++|.+ |..|+|+ .++
T Consensus 371 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~gy-~~e~dl~~~~~~arl~id~---s~~eg~~-~~i 445 (519)
T TIGR03713 371 DILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEKERIAFTTL-TNEEDLISALDKLRLIIDL---SKEPDLY-TQI 445 (519)
T ss_pred HHHHHHHhhhchhhhccccchhhhhhhcccchhhcccccEEEEEec-CCHHHHHHHHhhheEEEEC---CCCCChH-HHH
Confidence 666666444 6999997 4555999999999999986 8889999 999
Q ss_pred HHHcCCCcEEEeccCccccceecCCcEEEeCChHHHHHHHHHh
Q 014316 383 DMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLVN 425 (427)
Q Consensus 383 Eama~G~PVIas~~~g~~e~v~~~~~G~l~~~~~~la~~l~~~ 425 (427)
||+++|+|+| .-|..++|.|+.||+++++.++|+++|..+
T Consensus 446 eAiS~GiPqI---nyg~~~~V~d~~NG~li~d~~~l~~al~~~ 485 (519)
T TIGR03713 446 SGISAGIPQI---NKVETDYVEHNKNGYIIDDISELLKALDYY 485 (519)
T ss_pred HHHHcCCCee---ecCCceeeEcCCCcEEeCCHHHHHHHHHHH
Confidence 9999999999 445699999999999999999999998654
No 93
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.52 E-value=8.3e-14 Score=121.64 Aligned_cols=152 Identities=20% Similarity=0.236 Sum_probs=85.8
Q ss_pred hHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhh
Q 014316 20 RMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKI 99 (427)
Q Consensus 20 r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (427)
.+...+.+|+++ ||+|+|+++....... .....++++++++... .............+.+.+ ..+.
T Consensus 6 ~~~~l~~~L~~~-G~~V~v~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l----------~~~~ 71 (160)
T PF13579_consen 6 YVRELARALAAR-GHEVTVVTPQPDPEDD-EEEEDGVRVHRLPLPR--RPWPLRLLRFLRRLRRLL----------AARR 71 (160)
T ss_dssp HHHHHHHHHHHT-T-EEEEEEE---GGG--SEEETTEEEEEE--S---SSSGGGHCCHHHHHHHHC----------HHCT
T ss_pred HHHHHHHHHHHC-CCEEEEEecCCCCccc-ccccCCceEEeccCCc--cchhhhhHHHHHHHHHHH----------hhhc
Confidence 356677888886 9999999987655322 2345689999998321 111111222222222221 1134
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
.+||+||+|+ ....+++.++++..++|+|+++|+... .........+++++++.+.+.||.++++|+.+++
T Consensus 72 ~~~Dvv~~~~---~~~~~~~~~~~~~~~~p~v~~~h~~~~------~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~ 142 (160)
T PF13579_consen 72 ERPDVVHAHS---PTAGLVAALARRRRGIPLVVTVHGTLF------RRGSRWKRRLYRWLERRLLRRADRVIVVSEAMRR 142 (160)
T ss_dssp ---SEEEEEH---HHHHHHHHHHHHHHT--EEEE-SS-T------------HHHHHHHHHHHHHHHH-SEEEESSHHHHH
T ss_pred cCCeEEEecc---cchhHHHHHHHHccCCcEEEEECCCch------hhccchhhHHHHHHHHHHHhcCCEEEECCHHHHH
Confidence 7999999998 344555666665779999999998632 1112334667788999999999999999999999
Q ss_pred HHHHhhCCe---EEEecCC
Q 014316 180 ELAQNWGIK---ATVLYDQ 195 (427)
Q Consensus 180 ~l~~~~~~~---~~vi~n~ 195 (427)
.+.+ ++.+ +.|||||
T Consensus 143 ~l~~-~g~~~~ri~vipnG 160 (160)
T PF13579_consen 143 YLRR-YGVPPDRIHVIPNG 160 (160)
T ss_dssp HHHH-H---GGGEEE----
T ss_pred HHHH-hCCCCCcEEEeCcC
Confidence 9988 6665 9999997
No 94
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.43 E-value=2.6e-11 Score=125.95 Aligned_cols=133 Identities=14% Similarity=0.094 Sum_probs=109.1
Q ss_pred eEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCC----EEEEEEeCCC--------
Q 014316 259 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR----LLFIITGKGP-------- 326 (427)
Q Consensus 259 ~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~i~G~G~-------- 326 (427)
.+|++++|+...||+...++|+..+.++ +|+ ++|+++|.+.
T Consensus 286 kiIl~VDRLDy~KGI~~kl~Afe~~L~~---------------------------~Pe~~gkv~Lvqi~~psr~~v~~y~ 338 (487)
T TIGR02398 286 KLILSAERVDYTKGILEKLNAYERLLER---------------------------RPELLGKVTLVTACVPAASGMTIYD 338 (487)
T ss_pred eEEEEecccccccCHHHHHHHHHHHHHh---------------------------CccccCceEEEEEeCCCcccchHHH
Confidence 4899999999999999999999999876 674 6899998763
Q ss_pred -ChHHHHHHHHHc-------CCCc-EEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCC----cEEE
Q 014316 327 -DKESYEEKIRRL-------RLKR-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL----PVCA 393 (427)
Q Consensus 327 -~~~~~~~~~~~l-------~l~~-V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~----PVIa 393 (427)
.+.++++++.+. ++.. +.|.+. ++.+++..+|+.||+++.+ |.++|+.++..|||||+. |+|.
T Consensus 339 ~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~-v~~~el~alYr~ADV~lvT---~lrDGmNLVa~Eyva~~~~~~GvLIL 414 (487)
T TIGR02398 339 ELQGQIEQAVGRINGRFARIGWTPLQFFTRS-LPYEEVSAWFAMADVMWIT---PLRDGLNLVAKEYVAAQGLLDGVLVL 414 (487)
T ss_pred HHHHHHHHHHHHHhhccCCCCCccEEEEcCC-CCHHHHHHHHHhCCEEEEC---ccccccCcchhhHHhhhcCCCCCEEE
Confidence 234455555554 3433 566666 9999999999999999986 888999999999999998 9999
Q ss_pred eccCccccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 394 VSYSCIEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 394 s~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
|..+|..+.+ ..++++ -|++++|++|...
T Consensus 415 SefaGaa~~l---~~AllVNP~d~~~~A~ai~~A 445 (487)
T TIGR02398 415 SEFAGAAVEL---KGALLTNPYDPVRMDETIYVA 445 (487)
T ss_pred eccccchhhc---CCCEEECCCCHHHHHHHHHHH
Confidence 9999888766 357888 4689999988753
No 95
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.40 E-value=3.3e-12 Score=113.40 Aligned_cols=94 Identities=20% Similarity=0.336 Sum_probs=58.2
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
.+||+||+|.+..... +.+... ++|.++++|+..+. ........+....+...+++...+.+|.++|+|+.+++
T Consensus 79 ~~~DiVh~~~~~~~~~---~~~~~~--~~~~v~~~H~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS~~~~~ 152 (177)
T PF13439_consen 79 EKPDIVHIHGPPAFWI---ALLACR--KVPIVYTIHGPYFE-RRFLKSKLSPYSYLNFRIERKLYKKADRIIAVSESTKD 152 (177)
T ss_dssp HT-SEEECCTTHCCCH---HHHHHH--CSCEEEEE-HHH---HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESSHHHHH
T ss_pred cCCCeEEecccchhHH---HHHhcc--CCCEEEEeCCCccc-ccccccccchhhhhhhhhhhhHHhcCCEEEEECHHHHH
Confidence 6999999998433221 222222 89999999998421 11111233444555556667778899999999999999
Q ss_pred HHHHhhCCe---EEEecCC-CCCCc
Q 014316 180 ELAQNWGIK---ATVLYDQ-PPEFF 200 (427)
Q Consensus 180 ~l~~~~~~~---~~vi~n~-~~~~f 200 (427)
++.+ +|.+ +.||||| |.+.|
T Consensus 153 ~l~~-~~~~~~ki~vI~ngid~~~F 176 (177)
T PF13439_consen 153 ELIK-FGIPPEKIHVIYNGIDTDRF 176 (177)
T ss_dssp HHHH-HT--SS-EEE----B-CCCH
T ss_pred HHHH-hCCcccCCEEEECCccHHHc
Confidence 9999 7754 9999999 88777
No 96
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.32 E-value=9.1e-10 Score=110.92 Aligned_cols=294 Identities=11% Similarity=0.069 Sum_probs=153.4
Q ss_pred hhHHHHHHHHHhh---CCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHH
Q 014316 19 PRMQYQALSLARQ---MSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFL 95 (427)
Q Consensus 19 ~r~~~~a~~La~~---~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (427)
+|..+=|+++++. .||+|.+++...+- ..+.....|+.++.++ ..+..+. ..++.++.+.+.+...++.++
T Consensus 12 GGHi~Pala~a~~l~~~g~~v~~vg~~~~~-e~~l~~~~g~~~~~~~--~~~l~~~-~~~~~~~~~~~~~~~~~~~~~-- 85 (352)
T PRK12446 12 AGHVTPNLAIIPYLKEDNWDISYIGSHQGI-EKTIIEKENIPYYSIS--SGKLRRY-FDLKNIKDPFLVMKGVMDAYV-- 85 (352)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEECCCcc-ccccCcccCCcEEEEe--ccCcCCC-chHHHHHHHHHHHHHHHHHHH--
Confidence 4555544444433 59999999855443 3344455588888887 3222111 022233333344433322222
Q ss_pred HhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCH
Q 014316 96 CVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQ 175 (427)
Q Consensus 96 ~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~ 175 (427)
+.+..+||+|+++. .+.++. +.+++++.++|++++-.+... ....+.+.+.+|.+.+--+
T Consensus 86 i~~~~kPdvvi~~G--gy~s~p-~~~aa~~~~~p~~i~e~n~~~-----------------g~~nr~~~~~a~~v~~~f~ 145 (352)
T PRK12446 86 RIRKLKPDVIFSKG--GFVSVP-VVIGGWLNRVPVLLHESDMTP-----------------GLANKIALRFASKIFVTFE 145 (352)
T ss_pred HHHhcCCCEEEecC--chhhHH-HHHHHHHcCCCEEEECCCCCc-----------------cHHHHHHHHhhCEEEEEcc
Confidence 12458999999987 333333 568889999998875554411 1122455677888866433
Q ss_pred HHHHHHHHhhCCeEEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCC
Q 014316 176 AMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP 255 (427)
Q Consensus 176 ~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (427)
...+.+. ..++.+.-|.--..|.... +.+ .+..+++.+
T Consensus 146 ~~~~~~~---~~k~~~tG~Pvr~~~~~~~---~~~------------------------------------~~~~~~l~~ 183 (352)
T PRK12446 146 EAAKHLP---KEKVIYTGSPVREEVLKGN---REK------------------------------------GLAFLGFSR 183 (352)
T ss_pred chhhhCC---CCCeEEECCcCCccccccc---chH------------------------------------HHHhcCCCC
Confidence 3222221 1123333332111221111 001 011124455
Q ss_pred CCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEE-EEEeCCCChHHHHHH
Q 014316 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IITGKGPDKESYEEK 334 (427)
Q Consensus 256 ~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~i~G~G~~~~~~~~~ 334 (427)
+++.++++.|+..- ..+-+++..+.... ..++++ +++|... +++.
T Consensus 184 ~~~~iLv~GGS~Ga----~~in~~~~~~l~~l--------------------------~~~~~vv~~~G~~~----~~~~ 229 (352)
T PRK12446 184 KKPVITIMGGSLGA----KKINETVREALPEL--------------------------LLKYQIVHLCGKGN----LDDS 229 (352)
T ss_pred CCcEEEEECCccch----HHHHHHHHHHHHhh--------------------------ccCcEEEEEeCCch----HHHH
Confidence 66766677777543 33334333322210 113444 4556542 2222
Q ss_pred HHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC-----c----cccceec
Q 014316 335 IRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS-----C----IEELVKV 405 (427)
Q Consensus 335 ~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~-----g----~~e~v~~ 405 (427)
.... .++...++ -.++++++|+.||++|+ .. =++++.|++++|+|.|..... + ..+.+.+
T Consensus 230 ~~~~--~~~~~~~f--~~~~m~~~~~~adlvIs-----r~--G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~ 298 (352)
T PRK12446 230 LQNK--EGYRQFEY--VHGELPDILAITDFVIS-----RA--GSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFER 298 (352)
T ss_pred Hhhc--CCcEEecc--hhhhHHHHHHhCCEEEE-----CC--ChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHH
Confidence 2222 24444465 13789999999999995 21 234899999999999998643 1 1224444
Q ss_pred CCcEEEeC----ChHHHHHHHHHh
Q 014316 406 DKNGLLFS----SSSELADQLLVN 425 (427)
Q Consensus 406 ~~~G~l~~----~~~~la~~l~~~ 425 (427)
...|..+. +++.+++.+.++
T Consensus 299 ~g~~~~l~~~~~~~~~l~~~l~~l 322 (352)
T PRK12446 299 QGYASVLYEEDVTVNSLIKHVEEL 322 (352)
T ss_pred CCCEEEcchhcCCHHHHHHHHHHH
Confidence 55565552 357788777654
No 97
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.32 E-value=1.4e-09 Score=109.21 Aligned_cols=285 Identities=21% Similarity=0.196 Sum_probs=157.8
Q ss_pred HHHHHHHHHhhCCCc-EEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcc--hhhHHHHHHHHHHHHHHHHHHHHh
Q 014316 21 MQYQALSLARQMSLE-VDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPK--VLKPVLLLLKPLIQFFMLLWFLCV 97 (427)
Q Consensus 21 ~~~~a~~La~~~g~~-V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 97 (427)
.+-.+.+|.++ |++ |.++..... .........+++++.++ ..+.++... ..+....+++.+.+...++
T Consensus 17 AlAl~~~l~~~-g~~~v~~~~~~~~-~e~~l~~~~~~~~~~I~--~~~~~~~~~~~~~~~~~~~~~~~~~a~~il----- 87 (357)
T COG0707 17 ALALAEELAKR-GWEQVIVLGTGDG-LEAFLVKQYGIEFELIP--SGGLRRKGSLKLLKAPFKLLKGVLQARKIL----- 87 (357)
T ss_pred HHHHHHHHHhh-CccEEEEeccccc-ceeeeccccCceEEEEe--cccccccCcHHHHHHHHHHHHHHHHHHHHH-----
Confidence 44455667775 995 555533222 23334445589999998 332222211 1222223333333322222
Q ss_pred hhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHH
Q 014316 98 KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (427)
Q Consensus 98 ~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (427)
+..+||+|+... .+++.. +.++++..++|++++..|.. .+. .. ++..+.|+.|.+--..
T Consensus 88 ~~~kPd~vig~G--gyvs~P-~~~Aa~~~~iPv~ihEqn~~-------~G~------an----k~~~~~a~~V~~~f~~- 146 (357)
T COG0707 88 KKLKPDVVIGTG--GYVSGP-VGIAAKLLGIPVIIHEQNAV-------PGL------AN----KILSKFAKKVASAFPK- 146 (357)
T ss_pred HHcCCCEEEecC--CccccH-HHHHHHhCCCCEEEEecCCC-------cch------hH----HHhHHhhceeeecccc-
Confidence 348999999965 244444 56778888999998888772 121 11 2233455555443222
Q ss_pred HHHHHHhhCC--eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccC
Q 014316 178 QHELAQNWGI--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (427)
Q Consensus 178 ~~~l~~~~~~--~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (427)
...+.. ++.+.-|. ..+++. .+ ....+ ....
T Consensus 147 ----~~~~~~~~~~~~tG~Pvr~~~~~-~~-~~~~~----------------------------------------~~~~ 180 (357)
T COG0707 147 ----LEAGVKPENVVVTGIPVRPEFEE-LP-AAEVR----------------------------------------KDGR 180 (357)
T ss_pred ----ccccCCCCceEEecCcccHHhhc-cc-hhhhh----------------------------------------hhcc
Confidence 111111 13344443 222222 11 01111 0111
Q ss_pred CCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCC-CEEE-EEEeCCCChHHHH
Q 014316 255 PNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYP-RLLF-IITGKGPDKESYE 332 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l-~i~G~G~~~~~~~ 332 (427)
.+.+.++++-|+. |...+-+++...... .. ++.+ .++|.+. .+++.
T Consensus 181 ~~~~~ilV~GGS~----Ga~~ln~~v~~~~~~---------------------------l~~~~~v~~~~G~~~-~~~~~ 228 (357)
T COG0707 181 LDKKTILVTGGSQ----GAKALNDLVPEALAK---------------------------LANRIQVIHQTGKND-LEELK 228 (357)
T ss_pred CCCcEEEEECCcc----hhHHHHHHHHHHHHH---------------------------hhhCeEEEEEcCcch-HHHHH
Confidence 2455566666665 444444444444332 22 3554 5556555 56666
Q ss_pred HHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcc--------cccee
Q 014316 333 EKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI--------EELVK 404 (427)
Q Consensus 333 ~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~--------~e~v~ 404 (427)
+...+++. +...++ .+++.++|+.||++|+ -.+ ++++.|..++|+|+|--..+.. ...+.
T Consensus 229 ~~~~~~~~--~~v~~f---~~dm~~~~~~ADLvIs----RaG---a~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~ 296 (357)
T COG0707 229 SAYNELGV--VRVLPF---IDDMAALLAAADLVIS----RAG---ALTIAELLALGVPAILVPYPPGADGHQEYNAKFLE 296 (357)
T ss_pred HHHhhcCc--EEEeeH---HhhHHHHHHhccEEEe----CCc---ccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHH
Confidence 66666665 888899 8999999999999996 111 2489999999999999875443 33455
Q ss_pred cCCcEEEeCC----hHHHHHHHHHh
Q 014316 405 VDKNGLLFSS----SSELADQLLVN 425 (427)
Q Consensus 405 ~~~~G~l~~~----~~~la~~l~~~ 425 (427)
+...|.++.+ ++.+++.|.++
T Consensus 297 ~~gaa~~i~~~~lt~~~l~~~i~~l 321 (357)
T COG0707 297 KAGAALVIRQSELTPEKLAELILRL 321 (357)
T ss_pred hCCCEEEeccccCCHHHHHHHHHHH
Confidence 5666777733 46788777665
No 98
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=99.24 E-value=6.7e-10 Score=101.03 Aligned_cols=175 Identities=14% Similarity=0.179 Sum_probs=114.7
Q ss_pred cceEEEEEeCCC-CCChhHHHHHHHHHhh---CCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHH
Q 014316 4 RGRACVVVLGDL-GRSPRMQYQALSLARQ---MSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVL 79 (427)
Q Consensus 4 ~~~~~v~~~~~~-~~~~r~~~~a~~La~~---~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~ 79 (427)
|+++.|+-.-++ ...+|+.+++..|+.. .|++|+|.|...... .......|+++..+| .........+...+.
T Consensus 1 mkkIaIiGtrGIPa~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~~-~~~~~y~gv~l~~i~--~~~~g~~~si~yd~~ 77 (185)
T PF09314_consen 1 MKKIAIIGTRGIPARYGGFETFVEELAPRLVSKGIDVTVYCRSDYYP-YKEFEYNGVRLVYIP--APKNGSAESIIYDFL 77 (185)
T ss_pred CceEEEEeCCCCCcccCcHHHHHHHHHHHHhcCCceEEEEEccCCCC-CCCcccCCeEEEEeC--CCCCCchHHHHHHHH
Confidence 456777665434 3677888888777665 599999999765432 234445699999998 322221222222222
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhh--cCCcEEEEecccchhhhhhhcCCCchH-HHHH
Q 014316 80 LLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSL--RRSAFIVDWHNFGYTLLSLSLGRRSHF-VSIY 156 (427)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~--~~~p~i~~~h~~~~~~~~~~~~~~~~~-~~~~ 156 (427)
.+...+. .......+.|+++++... . ..++..+...+ .|.|++++.|+..| +..+++.+ ++++
T Consensus 78 sl~~al~-------~~~~~~~~~~ii~ilg~~-~-g~~~~~~~r~~~~~g~~v~vN~DGlEW-----kR~KW~~~~k~~l 143 (185)
T PF09314_consen 78 SLLHALR-------FIKQDKIKYDIILILGYG-I-GPFFLPFLRKLRKKGGKVVVNMDGLEW-----KRAKWGRPAKKYL 143 (185)
T ss_pred HHHHHHH-------HHhhccccCCEEEEEcCC-c-cHHHHHHHHhhhhcCCcEEECCCcchh-----hhhhcCHHHHHHH
Confidence 2222211 111112368899998832 1 22324455544 36799999999977 12244444 6778
Q ss_pred HHHHHHHhccCCEEEEcCHHHHHHHHHhhC-CeEEEecCC
Q 014316 157 RWIEKYYGKMANGCLCVTQAMQHELAQNWG-IKATVLYDQ 195 (427)
Q Consensus 157 ~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~-~~~~vi~n~ 195 (427)
++-|+.+.+.||.+|+-|+..++++.++|+ .+.++|++|
T Consensus 144 k~~E~~avk~ad~lIaDs~~I~~y~~~~y~~~~s~~IaYG 183 (185)
T PF09314_consen 144 KFSEKLAVKYADRLIADSKGIQDYIKERYGRKKSTFIAYG 183 (185)
T ss_pred HHHHHHHHHhCCEEEEcCHHHHHHHHHHcCCCCcEEecCC
Confidence 889999999999999999999999999999 678899887
No 99
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=99.22 E-value=2.3e-09 Score=114.47 Aligned_cols=142 Identities=12% Similarity=0.040 Sum_probs=109.2
Q ss_pred CCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCC------
Q 014316 254 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD------ 327 (427)
Q Consensus 254 ~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~------ 327 (427)
.++.+ ++++++|+..+|+.+.+++++..+.+.... +...+.|++.|+|.-
T Consensus 386 dpd~~-~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~-----------------------~~~pvq~V~~Gka~p~d~~gk 441 (601)
T TIGR02094 386 DPDVL-TIGFARRFATYKRADLIFRDLERLARILNN-----------------------PERPVQIVFAGKAHPADGEGK 441 (601)
T ss_pred CCCCc-EEEEEEcchhhhhHHHHHHHHHHHHHHhhC-----------------------CCCCeEEEEEEecCcccchHH
Confidence 44444 899999999999999999999988753100 013589999999852
Q ss_pred --hHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEe-eccCCC-CCCCchHHHHHHcCCCcEEEeccCccccc
Q 014316 328 --KESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVC-LHTSSS-GLDLPMKVVDMFGCGLPVCAVSYSCIEEL 402 (427)
Q Consensus 328 --~~~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~-p~~~s~-~e~~p~~~lEama~G~PVIas~~~g~~e~ 402 (427)
...+.+++++... ++|.|+-. .+.+-...++++||++++ | |. .|.+|+.-+=||..|.+.+++-.|...|.
T Consensus 442 ~~i~~i~~la~~~~~~~kv~f~~~-Yd~~lA~~i~aG~Dv~L~~P---sr~~EacGtsqMka~~nGgL~~sv~DG~~~E~ 517 (601)
T TIGR02094 442 EIIQRIVEFSKRPEFRGRIVFLEN-YDINLARYLVSGVDVWLNNP---RRPLEASGTSGMKAAMNGVLNLSILDGWWGEG 517 (601)
T ss_pred HHHHHHHHHHhcccCCCCEEEEcC-CCHHHHHHHhhhheeEEeCC---CCCcCCchHHHHHHHHcCCceeecccCccccc
Confidence 2233444443223 37888776 678888899999999998 5 76 69999999999999999999999988887
Q ss_pred eecCCcEEEeC--------------ChHHHHHHHHH
Q 014316 403 VKVDKNGLLFS--------------SSSELADQLLV 424 (427)
Q Consensus 403 v~~~~~G~l~~--------------~~~~la~~l~~ 424 (427)
. ++.|||.++ ++++|-++|++
T Consensus 518 ~-~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ 552 (601)
T TIGR02094 518 Y-DGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLEN 552 (601)
T ss_pred C-CCCcEEEECCCccccccccccCCCHHHHHHHHHH
Confidence 7 678999996 24677777754
No 100
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.21 E-value=2.1e-09 Score=118.70 Aligned_cols=134 Identities=10% Similarity=0.129 Sum_probs=103.4
Q ss_pred eEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEE--EEEE-------eCCCChH
Q 014316 259 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL--FIIT-------GKGPDKE 329 (427)
Q Consensus 259 ~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~i~-------G~G~~~~ 329 (427)
.+|++++|+.+.||+...++|+..+.++ +|+++ ++++ |+++..+
T Consensus 364 kiIlgVDRLD~~KGI~~kL~AfE~fL~~---------------------------~Pe~r~kVVLvQIa~psr~~v~eY~ 416 (934)
T PLN03064 364 KVMLGVDRLDMIKGIPQKILAFEKFLEE---------------------------NPEWRDKVVLLQIAVPTRTDVPEYQ 416 (934)
T ss_pred eEEEEeeccccccCHHHHHHHHHHHHHh---------------------------CccccCCEEEEEEcCCCCCCcHHHH
Confidence 4999999999999999999999998776 67654 5555 5555544
Q ss_pred HHHH----HHHHcC----C---CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcC-----CCcEEE
Q 014316 330 SYEE----KIRRLR----L---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGC-----GLPVCA 393 (427)
Q Consensus 330 ~~~~----~~~~l~----l---~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~-----G~PVIa 393 (427)
++++ ++.+.+ - .-|.++..-++.+++.++|+.||+++++ |.+||+.++..||||| |++|+
T Consensus 417 ~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvT---slrDGmNLva~Eyva~~~~~~GvLIL- 492 (934)
T PLN03064 417 KLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVT---SLRDGMNLVSYEFVACQDSKKGVLIL- 492 (934)
T ss_pred HHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeC---ccccccCchHHHHHHhhcCCCCCeEE-
Confidence 4433 333332 1 1266666558899999999999999997 8999999999999999 55555
Q ss_pred eccCccccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 394 VSYSCIEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 394 s~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
|..+|..+.+ +..+++| .|.+++|++|.+.
T Consensus 493 SEfaGaa~~L--~~~AllVNP~D~~~vA~AI~~A 524 (934)
T PLN03064 493 SEFAGAAQSL--GAGAILVNPWNITEVAASIAQA 524 (934)
T ss_pred eCCCchHHHh--CCceEEECCCCHHHHHHHHHHH
Confidence 8888877777 5568898 4689999998763
No 101
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=99.20 E-value=9.3e-09 Score=105.21 Aligned_cols=233 Identities=12% Similarity=0.121 Sum_probs=138.5
Q ss_pred CCcEEEEcCCCChhHHHHHHHHHhhcCCcEEE---EecccchhhhhhhcCCCchHHH-----HHHH-HHHHHhccCCEEE
Q 014316 101 SPDVFLVQNPPSVPTLVAVKWASSLRRSAFIV---DWHNFGYTLLSLSLGRRSHFVS-----IYRW-IEKYYGKMANGCL 171 (427)
Q Consensus 101 ~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~---~~h~~~~~~~~~~~~~~~~~~~-----~~~~-~e~~~~~~ad~vi 171 (427)
+||+|++-. .++..+++++.|+|+++ +-.+..|.... .......+.+ ..-| ..+...+.||.+.
T Consensus 93 ~p~~v~~~G------g~v~~~aA~~~~~p~~~~~~~esn~~~~~~~-~~~~~~~~~~~~G~~~~p~e~n~l~~~~a~~v~ 165 (396)
T TIGR03492 93 KGDLIVAVG------DIVPLLFAWLSGKPYAFVGTAKSDYYWESGP-RRSPSDEYHRLEGSLYLPWERWLMRSRRCLAVF 165 (396)
T ss_pred cCCEEEEEC------cHHHHHHHHHcCCCceEEEeeccceeecCCC-CCccchhhhccCCCccCHHHHHHhhchhhCEEe
Confidence 899999986 22256778889999877 44444221000 0000000000 0112 1245667899999
Q ss_pred EcCHHHHHHHHHhhCCeEEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccccc
Q 014316 172 CVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDV 251 (427)
Q Consensus 172 ~vS~~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (427)
+-.+...+.+.+ .|.++.++-|.-.+.+..... .
T Consensus 166 ~~~~~t~~~l~~-~g~k~~~vGnPv~d~l~~~~~----~----------------------------------------- 199 (396)
T TIGR03492 166 VRDRLTARDLRR-QGVRASYLGNPMMDGLEPPER----K----------------------------------------- 199 (396)
T ss_pred CCCHHHHHHHHH-CCCeEEEeCcCHHhcCccccc----c-----------------------------------------
Confidence 989888888865 467777666651111111100 0
Q ss_pred ccCCCCCeEEEEEeecC--CCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEe-CCCCh
Q 014316 252 FLKPNRPALVVSSTSWT--PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG-KGPDK 328 (427)
Q Consensus 252 ~~~~~~~~~i~~~g~~~--~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G-~G~~~ 328 (427)
.+.++.+.+++.-|+-. ..+++..+++++..+.+ .+++.|++.= .+.+.
T Consensus 200 ~l~~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~----------------------------~~~~~~v~~~~~~~~~ 251 (396)
T TIGR03492 200 PLLTGRFRIALLPGSRPPEAYRNLKLLLRALEALPD----------------------------SQPFVFLAAIVPSLSL 251 (396)
T ss_pred ccCCCCCEEEEECCCCHHHHHccHHHHHHHHHHHhh----------------------------CCCeEEEEEeCCCCCH
Confidence 12233444566666543 33577799999988753 2567765543 45566
Q ss_pred HHHHHHHHHcCCC---------------cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEE
Q 014316 329 ESYEEKIRRLRLK---------------RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA 393 (427)
Q Consensus 329 ~~~~~~~~~l~l~---------------~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIa 393 (427)
+.+++.+++.++. ++.+..+ .+++.++|+.||++|+- .|.+..|++++|+|+|.
T Consensus 252 ~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~---~~~~~~~l~~ADlvI~r--------SGt~T~E~a~lg~P~Il 320 (396)
T TIGR03492 252 EKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLG---RGAFAEILHWADLGIAM--------AGTATEQAVGLGKPVIQ 320 (396)
T ss_pred HHHHHHHHhcCceecCCccccchhhccCceEEEec---hHhHHHHHHhCCEEEEC--------cCHHHHHHHHhCCCEEE
Confidence 7777777665542 2566565 67899999999999973 34566999999999999
Q ss_pred eccCccc---cceec-----CCcEEEe-CChHHHHHHHHHh
Q 014316 394 VSYSCIE---ELVKV-----DKNGLLF-SSSSELADQLLVN 425 (427)
Q Consensus 394 s~~~g~~---e~v~~-----~~~G~l~-~~~~~la~~l~~~ 425 (427)
....+.. .+.+. +....+. .+.+.+++.+.++
T Consensus 321 ip~~~~q~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~l 361 (396)
T TIGR03492 321 LPGKGPQFTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQL 361 (396)
T ss_pred EeCCCCHHHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHH
Confidence 9854431 11221 3233333 4468888877654
No 102
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=99.16 E-value=2.3e-08 Score=101.27 Aligned_cols=236 Identities=16% Similarity=0.122 Sum_probs=136.9
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
.+||+|+++. .....+.+.++++..++|++ ++|+-..+ .+ . .- ....+.+.+.|+..++.++..++
T Consensus 92 ~~Pd~vlv~G--D~~~~la~alaA~~~~IPv~-HveaG~rs-----~~--~-~e---E~~r~~i~~la~l~f~~t~~~~~ 157 (365)
T TIGR03568 92 LKPDLVVVLG--DRFEMLAAAIAAALLNIPIA-HIHGGEVT-----EG--A-ID---ESIRHAITKLSHLHFVATEEYRQ 157 (365)
T ss_pred hCCCEEEEeC--CchHHHHHHHHHHHhCCcEE-EEECCccC-----CC--C-ch---HHHHHHHHHHHhhccCCCHHHHH
Confidence 8899999997 23344447888999999965 45544221 11 1 11 11123445678888889999998
Q ss_pred HHHHhhCCe---EEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCC
Q 014316 180 ELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPN 256 (427)
Q Consensus 180 ~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (427)
.+.+. |.+ +.++-|...+.+.......+.++.. +++++.+
T Consensus 158 ~L~~e-g~~~~~i~~tG~~~iD~l~~~~~~~~~~~~~------------------------------------~lgl~~~ 200 (365)
T TIGR03568 158 RVIQM-GEDPDRVFNVGSPGLDNILSLDLLSKEELEE------------------------------------KLGIDLD 200 (365)
T ss_pred HHHHc-CCCCCcEEEECCcHHHHHHhhhccCHHHHHH------------------------------------HhCCCCC
Confidence 88764 432 5555554111111000001112111 1233333
Q ss_pred CCeEEEEEeecC--CCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHH
Q 014316 257 RPALVVSSTSWT--PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEK 334 (427)
Q Consensus 257 ~~~~i~~~g~~~--~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~ 334 (427)
++.+++..-+-. .....+.+.+.++.+.+. ..++.++.-..++..+.+.+.
T Consensus 201 ~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~---------------------------~~~~~vi~P~~~p~~~~i~~~ 253 (365)
T TIGR03568 201 KPYALVTFHPVTLEKESAEEQIKELLKALDEL---------------------------NKNYIFTYPNADAGSRIINEA 253 (365)
T ss_pred CCEEEEEeCCCcccccCchHHHHHHHHHHHHh---------------------------ccCCEEEEeCCCCCchHHHHH
Confidence 344434333322 223233333344443332 123444333333444444444
Q ss_pred HHHcC--CCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe
Q 014316 335 IRRLR--LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF 412 (427)
Q Consensus 335 ~~~l~--l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~ 412 (427)
++++. .++|.+.+. ++..++..+++.|+++|.- |++ -+-||.+.|+|+|+ .+.-+|.+..|.+.+++
T Consensus 254 i~~~~~~~~~v~l~~~-l~~~~~l~Ll~~a~~vitd---SSg-----gi~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~v 322 (365)
T TIGR03568 254 IEEYVNEHPNFRLFKS-LGQERYLSLLKNADAVIGN---SSS-----GIIEAPSFGVPTIN--IGTRQKGRLRADSVIDV 322 (365)
T ss_pred HHHHhcCCCCEEEECC-CChHHHHHHHHhCCEEEEc---Chh-----HHHhhhhcCCCEEe--ecCCchhhhhcCeEEEe
Confidence 44432 357999998 9999999999999999952 322 35899999999995 56788888888898888
Q ss_pred C-ChHHHHHHHHH
Q 014316 413 S-SSSELADQLLV 424 (427)
Q Consensus 413 ~-~~~~la~~l~~ 424 (427)
+ +++++.+++.+
T Consensus 323 g~~~~~I~~a~~~ 335 (365)
T TIGR03568 323 DPDKEEIVKAIEK 335 (365)
T ss_pred CCCHHHHHHHHHH
Confidence 4 78888888776
No 103
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=99.16 E-value=1.3e-09 Score=94.27 Aligned_cols=128 Identities=17% Similarity=0.191 Sum_probs=84.2
Q ss_pred hhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhh
Q 014316 19 PRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVK 98 (427)
Q Consensus 19 ~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (427)
......+..|.++ ||+|+++|...+. .......++++++++. . ......... ...+.+.+ +
T Consensus 11 ~~~~~~~~~L~~~-g~~V~ii~~~~~~--~~~~~~~~i~~~~~~~--~-~k~~~~~~~-~~~l~k~i------------k 71 (139)
T PF13477_consen 11 TFIYNLAKELKKR-GYDVHIITPRNDY--EKYEIIEGIKVIRLPS--P-RKSPLNYIK-YFRLRKII------------K 71 (139)
T ss_pred HHHHHHHHHHHHC-CCEEEEEEcCCCc--hhhhHhCCeEEEEecC--C-CCccHHHHH-HHHHHHHh------------c
Confidence 4567778889986 9999999986543 3333456999999972 1 111111111 11222222 3
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcC-CcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcC
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRR-SAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVT 174 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~-~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 174 (427)
..+||+||+|.+. +..+++.+++++.+ +|+|++.|+... . ......++.+++++++.++||.+++.|
T Consensus 72 ~~~~DvIh~h~~~--~~~~~~~l~~~~~~~~~~i~~~hg~~~------~-~~~~~~~~~~~~~~~~~k~~~~ii~~~ 139 (139)
T PF13477_consen 72 KEKPDVIHCHTPS--PYGLFAMLAKKLLKNKKVIYTVHGSDF------Y-NSSKKKKLKKFIIKFAFKRADKIIVQS 139 (139)
T ss_pred cCCCCEEEEecCC--hHHHHHHHHHHHcCCCCEEEEecCCee------e-cCCchHHHHHHHHHHHHHhCCEEEEcC
Confidence 4889999999943 22454677777777 999999998743 1 122223367889999999999999875
No 104
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.15 E-value=4.8e-09 Score=109.36 Aligned_cols=226 Identities=16% Similarity=0.162 Sum_probs=125.9
Q ss_pred HHHHHHHhccCCEEEEcCHHHHHHHHHhhCCe-EEEecCC-CCCCcCCCChHH-HH-HHHhhhhhcccCCCCccccccCC
Q 014316 157 RWIEKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-PPEFFHPTSLEE-KH-ELFCRLNKILHQPLGVQDCVSNG 232 (427)
Q Consensus 157 ~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~-~~~~f~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~ 232 (427)
..+|+...+.||.+.+||+-+..+-...++.+ =.|+||| +.+.|.....-. .+ .-..++.
T Consensus 212 ~~iEraaA~~AdvFTTVSeITa~Ea~~LL~r~pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~---------------- 275 (633)
T PF05693_consen 212 HSIERAAAHYADVFTTVSEITAKEAEHLLKRKPDVVTPNGLNVDKFPALHEFQNLHAKAKEKIH---------------- 275 (633)
T ss_dssp HHHHHHHHHHSSEEEESSHHHHHHHHHHHSS--SEE----B-GGGTSSTTHHHHHHHHHHHHHH----------------
T ss_pred HHHHHHHHHhcCeeeehhhhHHHHHHHHhCCCCCEEcCCCccccccccchHHHHHHHHHHHHHH----------------
Confidence 56899999999999999999999887767666 4788999 767666554211 11 1111111
Q ss_pred CCCCCccchhhh-cccccccccCCCCCeEEEEEeecC-CCCCHHHHHHHHHhhHHHHhhhhc------------------
Q 014316 233 MEGQKADETIFT-SLAGIDVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILN------------------ 292 (427)
Q Consensus 233 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~g~~~-~~K~~~~Li~a~~~l~~~~~~~~~------------------ 292 (427)
.|- ...-..+...+++.++|..+||.+ ..||++.+|||++.|.+.......
T Consensus 276 ---------~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ 346 (633)
T PF05693_consen 276 ---------EFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFN 346 (633)
T ss_dssp ---------HHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-
T ss_pred ---------HHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcC
Confidence 110 001111233455677888999998 889999999999999875322100
Q ss_pred --------------cCCCchhhhhh---------hhhcCCcc-------------------cCCCCEE-EEEEeCCCChH
Q 014316 293 --------------EDDSTNEEVFL---------KEISDGKQ-------------------YLYPRLL-FIITGKGPDKE 329 (427)
Q Consensus 293 --------------~~~~~~~~~~~---------~~~~~~~~-------------------~~~~~~~-l~i~G~G~~~~ 329 (427)
+--..+|+-+- ..+|+.++ ...|-+. -.+. ....+
T Consensus 347 ve~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~--d~~~D 424 (633)
T PF05693_consen 347 VESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLH--DDSND 424 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEET--TTTT-
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCC--CCccC
Confidence 00001111110 11111111 1112111 1111 22345
Q ss_pred HHHHHHHHcCCC-------cEEEecCCCCcc------cHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEecc
Q 014316 330 SYEEKIRRLRLK-------RVAFRTMWLSAE------DYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 396 (427)
Q Consensus 330 ~~~~~~~~l~l~-------~V~f~g~~~~~~------~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~ 396 (427)
.+-..++++++. .|.|.+.+++.. ++.+++..+|++|+| |.+|+.|.+.+|+.|+|+|.|+|+.
T Consensus 425 pILn~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFP---SYYEPWGYTPlE~~a~gVPsITTnL 501 (633)
T PF05693_consen 425 PILNMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFP---SYYEPWGYTPLECTAFGVPSITTNL 501 (633)
T ss_dssp HHHHHHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE-----SSBSS-HHHHHHHHTT--EEEETT
T ss_pred HHHHHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccCceeeec---cccccccCChHHHhhcCCceeeccc
Confidence 666778888772 288888767644 688999999999998 9999999999999999999999998
Q ss_pred Cccccceec-----CCcEEEe
Q 014316 397 SCIEELVKV-----DKNGLLF 412 (427)
Q Consensus 397 ~g~~e~v~~-----~~~G~l~ 412 (427)
+|....+++ ...|+.+
T Consensus 502 sGFG~~~~~~~~~~~~~GV~V 522 (633)
T PF05693_consen 502 SGFGCWMQEHIEDPEEYGVYV 522 (633)
T ss_dssp BHHHHHHHTTS-HHGGGTEEE
T ss_pred hhHHHHHHHhhccCcCCcEEE
Confidence 887655542 4568877
No 105
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=99.15 E-value=4.3e-09 Score=108.51 Aligned_cols=113 Identities=12% Similarity=0.137 Sum_probs=93.6
Q ss_pred HHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCC-hHHHHHHHHHcCCCc-EEEecCCCC
Q 014316 274 GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD-KESYEEKIRRLRLKR-VAFRTMWLS 351 (427)
Q Consensus 274 ~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~-~~~~~~~~~~l~l~~-V~f~g~~~~ 351 (427)
...|++++.+.+. .|+++|.| |.+.. .+.+.++ .++ +| +.+.| ..
T Consensus 291 s~~I~~i~~Lv~~---------------------------lPd~~f~I-ga~te~s~kL~~L-~~y--~nvvly~~--~~ 337 (438)
T TIGR02919 291 SDQIEHLEEIVQA---------------------------LPDYHFHI-AALTEMSSKLMSL-DKY--DNVKLYPN--IT 337 (438)
T ss_pred HHHHHHHHHHHHh---------------------------CCCcEEEE-EecCcccHHHHHH-Hhc--CCcEEECC--cC
Confidence 8899999999987 99999999 87765 5777777 655 66 55555 45
Q ss_pred cccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC-ccccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 352 AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS-CIEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 352 ~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~-g~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
.+++.++|..||+++.. |.+|++++.+.||++.|+||++.+.. |..+++.+ |.++ +++++++++|.++
T Consensus 338 ~~~l~~ly~~~dlyLdi---n~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~l 408 (438)
T TIGR02919 338 TQKIQELYQTCDIYLDI---NHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDL 408 (438)
T ss_pred hHHHHHHHHhccEEEEc---cccccHHHHHHHHHHcCCcEEEEecccCCcccccC---CceecCCCHHHHHHHHHHH
Confidence 66899999999999986 88899999999999999999999844 55677755 7777 7789999998765
No 106
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.09 E-value=3.2e-08 Score=97.64 Aligned_cols=117 Identities=21% Similarity=0.301 Sum_probs=83.8
Q ss_pred CCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHH
Q 014316 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI 335 (427)
Q Consensus 256 ~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~ 335 (427)
+.+.+++|.|..... .++++++. .++..++++|.+....
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~-------------------------------~~~~~~~v~g~~~~~~------ 229 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKA-------------------------------LPDYQFIVFGPNAADP------ 229 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHh-------------------------------CCCCeEEEEcCCcccc------
Confidence 345688999887655 66677666 4578888887652111
Q ss_pred HHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcc------ccceecCCcE
Q 014316 336 RRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI------EELVKVDKNG 409 (427)
Q Consensus 336 ~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~------~e~v~~~~~G 409 (427)
..+||++.++ +.+++.+++..||++|.- ...+ ++.|++++|+|+|.-...+. .+.+++...|
T Consensus 230 ---~~~ni~~~~~--~~~~~~~~m~~ad~vIs~--~G~~-----t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~ 297 (318)
T PF13528_consen 230 ---RPGNIHVRPF--STPDFAELMAAADLVISK--GGYT-----TISEALALGKPALVIPRPGQDEQEYNARKLEELGLG 297 (318)
T ss_pred ---cCCCEEEeec--ChHHHHHHHHhCCEEEEC--CCHH-----HHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCe
Confidence 1358999886 458999999999999962 1221 59999999999999987553 3355566667
Q ss_pred EEeC----ChHHHHHHHHHh
Q 014316 410 LLFS----SSSELADQLLVN 425 (427)
Q Consensus 410 ~l~~----~~~~la~~l~~~ 425 (427)
..++ +++.|++.|+++
T Consensus 298 ~~~~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 298 IVLSQEDLTPERLAEFLERL 317 (318)
T ss_pred EEcccccCCHHHHHHHHhcC
Confidence 6653 578999998764
No 107
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.87 E-value=6.4e-07 Score=87.37 Aligned_cols=98 Identities=19% Similarity=0.204 Sum_probs=73.6
Q ss_pred CeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCC-CChHHHHHHHH
Q 014316 258 PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDKESYEEKIR 336 (427)
Q Consensus 258 ~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G-~~~~~~~~~~~ 336 (427)
+.++++.|...+.+....+++++..+.. ..++. +++|.+ +..+++++.++
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~~----------------------------~~~i~-vv~G~~~~~~~~l~~~~~ 221 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQI----------------------------NISIT-LVTGSSNPNLDELKKFAK 221 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhcccc----------------------------CceEE-EEECCCCcCHHHHHHHHH
Confidence 4578888887776656777887776421 11233 477866 56677777776
Q ss_pred HcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC
Q 014316 337 RLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 337 ~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~ 397 (427)
.. .++++.++ .+++.+++.+||++|.. -|.+++|++++|+|+|+....
T Consensus 222 ~~--~~i~~~~~---~~~m~~lm~~aDl~Is~--------~G~T~~E~~a~g~P~i~i~~~ 269 (279)
T TIGR03590 222 EY--PNIILFID---VENMAELMNEADLAIGA--------AGSTSWERCCLGLPSLAICLA 269 (279)
T ss_pred hC--CCEEEEeC---HHHHHHHHHHCCEEEEC--------CchHHHHHHHcCCCEEEEEec
Confidence 64 48999888 89999999999999963 456899999999999987653
No 108
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=98.78 E-value=4.3e-07 Score=92.58 Aligned_cols=74 Identities=18% Similarity=0.139 Sum_probs=53.7
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceecCCcEEEeC---
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKNGLLFS--- 413 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~~~~G~l~~--- 413 (427)
+||.+.+. ++ ..+++..||++|. ++ | ..++.|++++|+|+|.....+ ..+.+.+...|...+
T Consensus 288 ~~v~~~~~-~p---~~~ll~~~d~~I~-----hg-G-~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~ 356 (401)
T cd03784 288 DNVRVVDF-VP---HDWLLPRCAAVVH-----HG-G-AGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRE 356 (401)
T ss_pred CceEEeCC-CC---HHHHhhhhheeee-----cC-C-chhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCccc
Confidence 58999886 65 4567899999994 22 1 248999999999999997554 344455556676662
Q ss_pred -ChHHHHHHHHHh
Q 014316 414 -SSSELADQLLVN 425 (427)
Q Consensus 414 -~~~~la~~l~~~ 425 (427)
+.+++++++.++
T Consensus 357 ~~~~~l~~al~~~ 369 (401)
T cd03784 357 LTAERLAAALRRL 369 (401)
T ss_pred CCHHHHHHHHHHH
Confidence 568888888765
No 109
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=98.71 E-value=1.8e-06 Score=94.52 Aligned_cols=132 Identities=16% Similarity=0.063 Sum_probs=101.2
Q ss_pred CCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCC-Ch---H
Q 014316 254 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP-DK---E 329 (427)
Q Consensus 254 ~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~-~~---~ 329 (427)
.++. ++|+++.|+..+|+.+.++..+..+.+.... ....+.|++.|++. .. .
T Consensus 475 dpd~-ltigfarRfa~YKR~~Lil~dl~rl~~il~~-----------------------~~~pvQ~IfaGKAhP~d~~gK 530 (778)
T cd04299 475 DPNV-LTIGFARRFATYKRATLLLRDPERLKRLLND-----------------------PERPVQFIFAGKAHPADEPGK 530 (778)
T ss_pred CCCc-cEEeeeecchhhhhHHHHHHHHHHHHHHhhC-----------------------CCCCeEEEEEEecCccchHHH
Confidence 3443 4899999999999999999998888653100 01248999999874 11 1
Q ss_pred ----HHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCC--CCCCchHHHHHHcCCCcEEEeccCccccc
Q 014316 330 ----SYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS--GLDLPMKVVDMFGCGLPVCAVSYSCIEEL 402 (427)
Q Consensus 330 ----~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~--~e~~p~~~lEama~G~PVIas~~~g~~e~ 402 (427)
.+.+++++... .+|.|+-. .+.+-...++++||+.++| |. .|.+|+.-+=||..|.+-+++..|-..|.
T Consensus 531 ~iIk~i~~~a~~p~~~~kVvfle~-Yd~~lA~~LvaG~DvwLn~---prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~ 606 (778)
T cd04299 531 ELIQEIVEFSRRPEFRGRIVFLED-YDMALARHLVQGVDVWLNT---PRRPLEASGTSGMKAALNGGLNLSVLDGWWDEG 606 (778)
T ss_pred HHHHHHHHHHhCcCCCCcEEEEcC-CCHHHHHHHHhhhhhcccC---CCCCCCCCccchHHHHHcCCeeeecccCccccc
Confidence 22333332233 37888776 6777888999999999997 55 59999999999999999999999999998
Q ss_pred eecCCcEEEeCC
Q 014316 403 VKVDKNGLLFSS 414 (427)
Q Consensus 403 v~~~~~G~l~~~ 414 (427)
. ++.||+.+++
T Consensus 607 ~-~g~nGwaig~ 617 (778)
T cd04299 607 Y-DGENGWAIGD 617 (778)
T ss_pred c-CCCCceEeCC
Confidence 8 8999999944
No 110
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.63 E-value=6.9e-05 Score=75.58 Aligned_cols=309 Identities=17% Similarity=0.153 Sum_probs=181.2
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHhh-CCCcEEEEecCCCC--CcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHH
Q 014316 7 ACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGSK--PHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLK 83 (427)
Q Consensus 7 ~~v~~~~~~~~~~r~~~~a~~La~~-~g~~V~vi~~~~~~--~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (427)
.+-++..+.|-.--..-...+|.++ .+..+.+.|..... ...+.. .+.+.+.++|.. + + ....+
T Consensus 51 ~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~-~~~v~h~YlP~D------~---~---~~v~r 117 (419)
T COG1519 51 LVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALF-GDSVIHQYLPLD------L---P---IAVRR 117 (419)
T ss_pred eEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHc-CCCeEEEecCcC------c---h---HHHHH
Confidence 4445555566544555566666665 45677666644322 111122 224777777721 1 1 12233
Q ss_pred HHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHH
Q 014316 84 PLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYY 163 (427)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 163 (427)
++.. .+||+++.-....++.++ .-++.+++|.++- ..- -+ . ++..-++..+.+.+.+
T Consensus 118 Fl~~------------~~P~l~Ii~EtElWPnli---~e~~~~~~p~~Lv-NaR-LS-----~-rS~~~y~k~~~~~~~~ 174 (419)
T COG1519 118 FLRK------------WRPKLLIIMETELWPNLI---NELKRRGIPLVLV-NAR-LS-----D-RSFARYAKLKFLARLL 174 (419)
T ss_pred HHHh------------cCCCEEEEEeccccHHHH---HHHHHcCCCEEEE-eee-ec-----h-hhhHHHHHHHHHHHHH
Confidence 3333 799998888755555544 4456679997652 110 00 0 1111123335566667
Q ss_pred hccCCEEEEcCHHHHHHHHHhhCCe-EEEecCCCCCCcCCCChHH---HHHHHhhhhhcccCCCCccccccCCCCCCCcc
Q 014316 164 GKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQPPEFFHPTSLEE---KHELFCRLNKILHQPLGVQDCVSNGMEGQKAD 239 (427)
Q Consensus 164 ~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~~~~~f~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (427)
.+..|.|++-|+.+++.+.+- |.+ +.+.-|- .+.....+.. ...+..
T Consensus 175 ~~~i~li~aQse~D~~Rf~~L-Ga~~v~v~GNl--Kfd~~~~~~~~~~~~~~r~-------------------------- 225 (419)
T COG1519 175 FKNIDLILAQSEEDAQRFRSL-GAKPVVVTGNL--KFDIEPPPQLAAELAALRR-------------------------- 225 (419)
T ss_pred HHhcceeeecCHHHHHHHHhc-CCcceEEecce--eecCCCChhhHHHHHHHHH--------------------------
Confidence 788999999999999999774 555 4444443 2221111111 111111
Q ss_pred chhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEE
Q 014316 240 ETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF 319 (427)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 319 (427)
.....++ +++..+... ..-+.++++++.++++ +|+..+
T Consensus 226 ------------~l~~~r~-v~iaaSTH~--GEeei~l~~~~~l~~~---------------------------~~~~ll 263 (419)
T COG1519 226 ------------QLGGHRP-VWVAASTHE--GEEEIILDAHQALKKQ---------------------------FPNLLL 263 (419)
T ss_pred ------------hcCCCCc-eEEEecCCC--chHHHHHHHHHHHHhh---------------------------CCCceE
Confidence 1222255 555555533 3345689999999987 899999
Q ss_pred EEEeCCCCh-HHHHHHHHHcCCCcEEEecC-CC----------CcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcC
Q 014316 320 IITGKGPDK-ESYEEKIRRLRLKRVAFRTM-WL----------SAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGC 387 (427)
Q Consensus 320 ~i~G~G~~~-~~~~~~~~~l~l~~V~f~g~-~~----------~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~ 387 (427)
+++=.-|++ ...++++++.|++-..+... +. +--++..+|+.+|+.++= .|.-.-=|-=++|+.++
T Consensus 264 IlVPRHpERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVG--GSlv~~GGHN~LEpa~~ 341 (419)
T COG1519 264 ILVPRHPERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTMGELGLLYGIADIAFVG--GSLVPIGGHNPLEPAAF 341 (419)
T ss_pred EEecCChhhHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecHhHHHHHHhhccEEEEC--CcccCCCCCChhhHHHc
Confidence 999877654 56788888887743332221 00 133788999999999872 22111112248999999
Q ss_pred CCcEEEec----cCccccceecCCcEEEeCChHHHHHHHHH
Q 014316 388 GLPVCAVS----YSCIEELVKVDKNGLLFSSSSELADQLLV 424 (427)
Q Consensus 388 G~PVIas~----~~g~~e~v~~~~~G~l~~~~~~la~~l~~ 424 (427)
|+|||+-. ...+.+-+...+.|+.++|.+.+++.+..
T Consensus 342 ~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~~~~l~~~v~~ 382 (419)
T COG1519 342 GTPVIFGPYTFNFSDIAERLLQAGAGLQVEDADLLAKAVEL 382 (419)
T ss_pred CCCEEeCCccccHHHHHHHHHhcCCeEEECCHHHHHHHHHH
Confidence 99999864 45555666677778888887777766543
No 111
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=98.63 E-value=3.2e-06 Score=85.47 Aligned_cols=279 Identities=17% Similarity=0.188 Sum_probs=159.8
Q ss_pred EEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEE-EeecCCCCCCCCcchhhHHHHHHHHHHH
Q 014316 9 VVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIH-TMTQWPTIPRGLPKVLKPVLLLLKPLIQ 87 (427)
Q Consensus 9 v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (427)
.++.|+.+|.-.....+.+|.++ .-++.+.+.++.. ..+ .|++.. .+. .....++.-..+.+..+++...+
T Consensus 2 ~i~AGE~SGD~~ga~Li~~Lk~~-~p~~~~~GvGG~~-M~~----~G~~~l~d~~--~lsvmG~~Evl~~l~~~~~~~~~ 73 (373)
T PF02684_consen 2 FISAGEASGDLHGARLIRALKAR-DPDIEFYGVGGPR-MQA----AGVESLFDME--ELSVMGFVEVLKKLPKLKRLFRK 73 (373)
T ss_pred EEEeeCccHHHHHHHHHHHHHhh-CCCcEEEEEechH-HHh----CCCceecchH--HhhhccHHHHHHHHHHHHHHHHH
Confidence 35667777766677777888886 5578888776654 221 243322 111 10011111122223333333333
Q ss_pred HHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCc--EEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhc
Q 014316 88 FFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSA--FIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGK 165 (427)
Q Consensus 88 ~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p--~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 165 (427)
+... .+..+||+++.-+.+.+..-+ +..+++ +++| +|+.+---.| . .+..+. +.+.+
T Consensus 74 ~~~~-----~~~~~pd~vIlID~pgFNlrl-ak~lk~-~~~~~~viyYI~PqvW---A---Wr~~R~--------~~i~~ 132 (373)
T PF02684_consen 74 LVER-----IKEEKPDVVILIDYPGFNLRL-AKKLKK-RGIPIKVIYYISPQVW---A---WRPGRA--------KKIKK 132 (373)
T ss_pred HHHH-----HHHcCCCEEEEeCCCCccHHH-HHHHHH-hCCCceEEEEECCcee---e---eCccHH--------HHHHH
Confidence 2211 134899999998877666554 443333 3555 7665432212 1 121211 22335
Q ss_pred cCCEEEEcCHHHHHHHHHhhCCeEEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhc
Q 014316 166 MANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTS 245 (427)
Q Consensus 166 ~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (427)
..|.++|+=....+.+.+ .|.+++.+-|.-.+...+... +.+
T Consensus 133 ~~D~ll~ifPFE~~~y~~-~g~~~~~VGHPl~d~~~~~~~--~~~----------------------------------- 174 (373)
T PF02684_consen 133 YVDHLLVIFPFEPEFYKK-HGVPVTYVGHPLLDEVKPEPD--RAE----------------------------------- 174 (373)
T ss_pred HHhheeECCcccHHHHhc-cCCCeEEECCcchhhhccCCC--HHH-----------------------------------
Confidence 678899988888877765 477777776652222222211 111
Q ss_pred ccccccccCCCCCeEEEEEeec--CCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEe
Q 014316 246 LAGIDVFLKPNRPALVVSSTSW--TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG 323 (427)
Q Consensus 246 ~~~~~~~~~~~~~~~i~~~g~~--~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G 323 (427)
.++.+ ++++++.+.+.-|+= +-.+.+..++++++.+.++ +|+++|++..
T Consensus 175 -~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~---------------------------~p~l~fvvp~ 225 (373)
T PF02684_consen 175 -AREKL-LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQ---------------------------RPDLQFVVPV 225 (373)
T ss_pred -HHHhc-CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHh---------------------------CCCeEEEEec
Confidence 01112 456666566666652 2335668889999999987 8999999887
Q ss_pred CCCChHH-HHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 324 KGPDKES-YEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 324 ~G~~~~~-~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
.....++ +++..+..+. ++...-. ..+-.+.++.||+.+.. .|.+.+|++.+|+|.|..-
T Consensus 226 a~~~~~~~i~~~~~~~~~-~~~~~~~---~~~~~~~m~~ad~al~~--------SGTaTLE~Al~g~P~Vv~Y 286 (373)
T PF02684_consen 226 APEVHEELIEEILAEYPP-DVSIVII---EGESYDAMAAADAALAA--------SGTATLEAALLGVPMVVAY 286 (373)
T ss_pred CCHHHHHHHHHHHHhhCC-CCeEEEc---CCchHHHHHhCcchhhc--------CCHHHHHHHHhCCCEEEEE
Confidence 6544433 4444444433 2222222 45678899999999874 5679999999999998764
No 112
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=98.57 E-value=1.3e-05 Score=79.56 Aligned_cols=74 Identities=16% Similarity=0.279 Sum_probs=52.3
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcccc------ceecCCcEEEeC-
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEE------LVKVDKNGLLFS- 413 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e------~v~~~~~G~l~~- 413 (427)
+|+.+.+. .+ +++.+++..||++|+ ..+ . .++.|++++|+|+|.....+..| .+.+.+.|...+
T Consensus 229 ~~v~~~~~-~~-~~~~~~l~~ad~vI~----~~G--~-~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~ 299 (321)
T TIGR00661 229 ENVEIRRI-TT-DNFKELIKNAELVIT----HGG--F-SLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEY 299 (321)
T ss_pred CCEEEEEC-Ch-HHHHHHHHhCCEEEE----CCC--h-HHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcCh
Confidence 58888885 44 789999999999996 222 1 26999999999999998765333 455666777662
Q ss_pred -ChHHHHHHHHH
Q 014316 414 -SSSELADQLLV 424 (427)
Q Consensus 414 -~~~~la~~l~~ 424 (427)
+. ++.+++.+
T Consensus 300 ~~~-~~~~~~~~ 310 (321)
T TIGR00661 300 KEL-RLLEAILD 310 (321)
T ss_pred hhH-HHHHHHHh
Confidence 33 44444443
No 113
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=98.56 E-value=4.2e-06 Score=83.39 Aligned_cols=279 Identities=15% Similarity=0.113 Sum_probs=157.0
Q ss_pred EEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHH
Q 014316 10 VVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFF 89 (427)
Q Consensus 10 ~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (427)
++.|+.+++--......+|-.+-+ +|..++-+++. ..+. |.+...=.. .....++.-.+..+..+++...++.
T Consensus 6 i~AGE~SGDllGa~LikaLk~~~~-~~efvGvgG~~-m~ae----G~~sl~~~~-elsvmGf~EVL~~lp~llk~~~~~~ 78 (381)
T COG0763 6 LSAGEASGDLLGAGLIKALKARYP-DVEFVGVGGEK-MEAE----GLESLFDME-ELSVMGFVEVLGRLPRLLKIRRELV 78 (381)
T ss_pred EEecccchhhHHHHHHHHHHhhCC-CeEEEEeccHH-HHhc----cCccccCHH-HHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 356777776666667778777633 88998876644 2111 321111000 0001111112222333333333322
Q ss_pred HHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHh-hcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCC
Q 014316 90 MLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMAN 168 (427)
Q Consensus 90 ~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad 168 (427)
+.+ ...+||++++-+.+.+...+ +..+.+ ...+|+|+.+--..| . .+..+ -..+.+..|
T Consensus 79 ~~i-----~~~kpD~~i~IDsPdFnl~v-ak~lrk~~p~i~iihYV~PsVW---A---Wr~~R--------a~~i~~~~D 138 (381)
T COG0763 79 RYI-----LANKPDVLILIDSPDFNLRV-AKKLRKAGPKIKIIHYVSPSVW---A---WRPKR--------AVKIAKYVD 138 (381)
T ss_pred HHH-----HhcCCCEEEEeCCCCCchHH-HHHHHHhCCCCCeEEEECccee---e---echhh--------HHHHHHHhh
Confidence 211 13899999999877776665 433333 345888775543322 0 01111 122335689
Q ss_pred EEEEcCHHHHHHHHHhhCCeEEEecCC--CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcc
Q 014316 169 GCLCVTQAMQHELAQNWGIKATVLYDQ--PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSL 246 (427)
Q Consensus 169 ~vi~vS~~~~~~l~~~~~~~~~vi~n~--~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (427)
.++++=....+.+.+ .|.+.+.+-+. |...+.+... .
T Consensus 139 ~lLailPFE~~~y~k-~g~~~~yVGHpl~d~i~~~~~r~----~------------------------------------ 177 (381)
T COG0763 139 HLLAILPFEPAFYDK-FGLPCTYVGHPLADEIPLLPDRE----A------------------------------------ 177 (381)
T ss_pred HeeeecCCCHHHHHh-cCCCeEEeCChhhhhccccccHH----H------------------------------------
Confidence 999998888877755 57775555444 3222332221 1
Q ss_pred cccccccCCCCCeEEEEEeecC--CCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeC
Q 014316 247 AGIDVFLKPNRPALVVSSTSWT--PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK 324 (427)
Q Consensus 247 ~~~~~~~~~~~~~~i~~~g~~~--~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~ 324 (427)
++.+++.+.+.+.+.+.-|+=. -.+-...+.+|+..+.++ +|+.+|++-=-
T Consensus 178 ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~---------------------------~~~~~~vlp~~ 230 (381)
T COG0763 178 AREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKAR---------------------------YPDLKFVLPLV 230 (381)
T ss_pred HHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhh---------------------------CCCceEEEecC
Confidence 2223355666666666666532 335667788889888876 89999999765
Q ss_pred CCChHHHHHHHH-HcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 325 GPDKESYEEKIR-RLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 325 G~~~~~~~~~~~-~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
.+..+.+++... ..... ... ++...+-.+.+.+||+.+.. .|.+.+|+|.+|+|.|.+-
T Consensus 231 ~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~a~~~aD~al~a--------SGT~tLE~aL~g~P~Vv~Y 290 (381)
T COG0763 231 NAKYRRIIEEALKWEVAG-LSL---ILIDGEKRKAFAAADAALAA--------SGTATLEAALAGTPMVVAY 290 (381)
T ss_pred cHHHHHHHHHHhhccccC-ceE---EecCchHHHHHHHhhHHHHh--------ccHHHHHHHHhCCCEEEEE
Confidence 543333332222 21111 112 13356778899999999864 6779999999999999764
No 114
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=98.54 E-value=1.7e-05 Score=80.79 Aligned_cols=92 Identities=18% Similarity=0.263 Sum_probs=59.8
Q ss_pred EEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC
Q 014316 318 LFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 318 ~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~ 397 (427)
.++.+|.+.+.+.++ .+ -++|.+.+. ++. .+++..||++|.- .+ . .++.||+++|+|+|.....
T Consensus 257 ~i~~~g~~~~~~~~~----~~-~~~v~~~~~-~p~---~~ll~~~~~~I~h----gG--~-~t~~Eal~~G~P~v~~p~~ 320 (392)
T TIGR01426 257 VVLSVGRGVDPADLG----EL-PPNVEVRQW-VPQ---LEILKKADAFITH----GG--M-NSTMEALFNGVPMVAVPQG 320 (392)
T ss_pred EEEEECCCCChhHhc----cC-CCCeEEeCC-CCH---HHHHhhCCEEEEC----CC--c-hHHHHHHHhCCCEEecCCc
Confidence 345567665433322 11 257888875 765 4778999999852 11 1 2799999999999997644
Q ss_pred c----cccceecCCcEEEeC----ChHHHHHHHHHh
Q 014316 398 C----IEELVKVDKNGLLFS----SSSELADQLLVN 425 (427)
Q Consensus 398 g----~~e~v~~~~~G~l~~----~~~~la~~l~~~ 425 (427)
+ ..+.+.+...|..+. +.++++++|+++
T Consensus 321 ~dq~~~a~~l~~~g~g~~l~~~~~~~~~l~~ai~~~ 356 (392)
T TIGR01426 321 ADQPMTARRIAELGLGRHLPPEEVTAEKLREAVLAV 356 (392)
T ss_pred ccHHHHHHHHHHCCCEEEeccccCCHHHHHHHHHHH
Confidence 3 233455556776662 357888888765
No 115
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.40 E-value=1.3e-05 Score=80.68 Aligned_cols=240 Identities=19% Similarity=0.175 Sum_probs=127.0
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
..+||+|+++. .....+.+.+++...++| |.++|+-..+ .....++ .-....+.+.+.||..+|.|+..+
T Consensus 65 ~~~Pd~Vlv~G--D~~~~la~alaA~~~~ip-v~HieaGlRs-----~d~~~g~--~de~~R~~i~~la~lhf~~t~~~~ 134 (346)
T PF02350_consen 65 REKPDAVLVLG--DRNEALAAALAAFYLNIP-VAHIEAGLRS-----GDRTEGM--PDEINRHAIDKLAHLHFAPTEEAR 134 (346)
T ss_dssp HHT-SEEEEET--TSHHHHHHHHHHHHTT-E-EEEES----------S-TTSST--THHHHHHHHHHH-SEEEESSHHHH
T ss_pred hcCCCEEEEEc--CCchHHHHHHHHHHhCCC-EEEecCCCCc-----cccCCCC--chhhhhhhhhhhhhhhccCCHHHH
Confidence 37999999997 344455578888899999 6666644110 0111111 012223456678999999999999
Q ss_pred HHHHHhhCCe---EEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCC
Q 014316 179 HELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP 255 (427)
Q Consensus 179 ~~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (427)
+.+.+. |.+ +.++-|.-.+.+ +..... . ...+. ...+....
T Consensus 135 ~~L~~~-G~~~~rI~~vG~~~~D~l-----------~~~~~~-~--------------------~~~~~---~~~i~~~~ 178 (346)
T PF02350_consen 135 ERLLQE-GEPPERIFVVGNPGIDAL-----------LQNKEE-I--------------------EEKYK---NSGILQDA 178 (346)
T ss_dssp HHHHHT-T--GGGEEE---HHHHHH-----------HHHHHT-T--------------------CC-HH---HHHHHHCT
T ss_pred HHHHhc-CCCCCeEEEEChHHHHHH-----------HHhHHH-H--------------------hhhhh---hHHHHhcc
Confidence 999876 553 555543211111 000000 0 00000 00000123
Q ss_pred CCCeEEEEEeecCC---CCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCC--CChHH
Q 014316 256 NRPALVVSSTSWTP---DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG--PDKES 330 (427)
Q Consensus 256 ~~~~~i~~~g~~~~---~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G--~~~~~ 330 (427)
.++.+++..=+.+. .+....+.++++.+.+. +++.+++.... .....
T Consensus 179 ~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~----------------------------~~~~vi~~~hn~p~~~~~ 230 (346)
T PF02350_consen 179 PKPYILVTLHPVTNEDNPERLEQILEALKALAER----------------------------QNVPVIFPLHNNPRGSDI 230 (346)
T ss_dssp TSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH----------------------------TTEEEEEE--S-HHHHHH
T ss_pred CCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc----------------------------CCCcEEEEecCCchHHHH
Confidence 34445555433222 34566777777777763 56888777752 22334
Q ss_pred HHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHH-HHHcCCCcEEEec-cCccccceecCCc
Q 014316 331 YEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVV-DMFGCGLPVCAVS-YSCIEELVKVDKN 408 (427)
Q Consensus 331 ~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~l-Eama~G~PVIas~-~~g~~e~v~~~~~ 408 (427)
+.+.++++ +++.+... ++..++..+++.|+++|- .|++ +. ||..+|+|||.-. .|.-.+.+..+.+
T Consensus 231 i~~~l~~~--~~v~~~~~-l~~~~~l~ll~~a~~vvg---dSsG------I~eEa~~lg~P~v~iR~~geRqe~r~~~~n 298 (346)
T PF02350_consen 231 IIEKLKKY--DNVRLIEP-LGYEEYLSLLKNADLVVG---DSSG------IQEEAPSLGKPVVNIRDSGERQEGRERGSN 298 (346)
T ss_dssp HHHHHTT---TTEEEE-----HHHHHHHHHHESEEEE---SSHH------HHHHGGGGT--EEECSSS-S-HHHHHTTSE
T ss_pred HHHHhccc--CCEEEECC-CCHHHHHHHHhcceEEEE---cCcc------HHHHHHHhCCeEEEecCCCCCHHHHhhcce
Confidence 44444444 48999998 999999999999999985 1223 56 9999999999996 5555666555555
Q ss_pred EEEe-CChHHHHHHHHHh
Q 014316 409 GLLF-SSSSELADQLLVN 425 (427)
Q Consensus 409 G~l~-~~~~~la~~l~~~ 425 (427)
-+ + .+.+++.+++.++
T Consensus 299 vl-v~~~~~~I~~ai~~~ 315 (346)
T PF02350_consen 299 VL-VGTDPEAIIQAIEKA 315 (346)
T ss_dssp EE-ETSSHHHHHHHHHHH
T ss_pred EE-eCCCHHHHHHHHHHH
Confidence 45 7 6677777777654
No 116
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.38 E-value=4.1e-05 Score=76.41 Aligned_cols=276 Identities=17% Similarity=0.130 Sum_probs=147.6
Q ss_pred HHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhhCCC
Q 014316 23 YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASP 102 (427)
Q Consensus 23 ~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (427)
..+..|-++ ||+|.|.|-..+. ..+..+..|+++..+. ... -....+.+ ..+.+..+++.. .+..+|
T Consensus 18 ~~I~eL~~~-GheV~it~R~~~~-~~~LL~~yg~~y~~iG--~~g---~~~~~Kl~----~~~~R~~~l~~~--~~~~~p 84 (335)
T PF04007_consen 18 NIIRELEKR-GHEVLITARDKDE-TEELLDLYGIDYIVIG--KHG---DSLYGKLL----ESIERQYKLLKL--IKKFKP 84 (335)
T ss_pred HHHHHHHhC-CCEEEEEEeccch-HHHHHHHcCCCeEEEc--CCC---CCHHHHHH----HHHHHHHHHHHH--HHhhCC
Confidence 345677775 9999999976543 5667777899999887 211 11112211 122222222222 123799
Q ss_pred cEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHHHHH
Q 014316 103 DVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELA 182 (427)
Q Consensus 103 Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~ 182 (427)
|++++++ . .-+..+++..|+|.|.-..+- ... ...++....||.+++..-.-...+
T Consensus 85 Dv~is~~---s---~~a~~va~~lgiP~I~f~D~e-~a~----------------~~~~Lt~Pla~~i~~P~~~~~~~~- 140 (335)
T PF04007_consen 85 DVAISFG---S---PEAARVAFGLGIPSIVFNDTE-HAI----------------AQNRLTLPLADVIITPEAIPKEFL- 140 (335)
T ss_pred CEEEecC---c---HHHHHHHHHhCCCeEEEecCc-hhh----------------ccceeehhcCCeeECCcccCHHHH-
Confidence 9999886 1 114457788899988754432 210 012334457898887755444333
Q ss_pred HhhCCeEEEe-cCC-C-CCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCe
Q 014316 183 QNWGIKATVL-YDQ-P-PEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPA 259 (427)
Q Consensus 183 ~~~~~~~~vi-~n~-~-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (427)
.++|.+-.+. +|| . ....++..++ .+.+.+ +++. +.+.
T Consensus 141 ~~~G~~~~i~~y~G~~E~ayl~~F~Pd--~~vl~~------------------------------------lg~~-~~~y 181 (335)
T PF04007_consen 141 KRFGAKNQIRTYNGYKELAYLHPFKPD--PEVLKE------------------------------------LGLD-DEPY 181 (335)
T ss_pred HhcCCcCCEEEECCeeeEEeecCCCCC--hhHHHH------------------------------------cCCC-CCCE
Confidence 3456553344 777 2 2222222111 122222 2322 2342
Q ss_pred EEEEEeecCCCCC------HHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHH
Q 014316 260 LVVSSTSWTPDED------FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (427)
Q Consensus 260 ~i~~~g~~~~~K~------~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~ 333 (427)
+++ |+.+++- -..+-+.+..+.+. .+. ++++-..+... +
T Consensus 182 Ivv---R~~~~~A~y~~~~~~i~~~ii~~L~~~----------------------------~~~-vV~ipr~~~~~---~ 226 (335)
T PF04007_consen 182 IVV---RPEAWKASYDNGKKSILPEIIEELEKY----------------------------GRN-VVIIPRYEDQR---E 226 (335)
T ss_pred EEE---EeccccCeeecCccchHHHHHHHHHhh----------------------------Cce-EEEecCCcchh---h
Confidence 332 3333221 12344555555553 333 44444332222 2
Q ss_pred HHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC---ccccceecCCcEE
Q 014316 334 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS---CIEELVKVDKNGL 410 (427)
Q Consensus 334 ~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~---g~~e~v~~~~~G~ 410 (427)
+.++.+ +.+... .-+...++.-||++|- . -|.-..||-..|+|.|++..| ++.+.+.+ .|+
T Consensus 227 ~~~~~~---~~i~~~---~vd~~~Ll~~a~l~Ig-----~---ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~~--~Gl 290 (335)
T PF04007_consen 227 LFEKYG---VIIPPE---PVDGLDLLYYADLVIG-----G---GGTMAREAALLGTPAISCFPGKLLAVDKYLIE--KGL 290 (335)
T ss_pred HHhccC---ccccCC---CCCHHHHHHhcCEEEe-----C---CcHHHHHHHHhCCCEEEecCCcchhHHHHHHH--CCC
Confidence 333332 444333 3355689999999994 2 245689999999999998644 33344433 466
Q ss_pred Ee--CChHHHHHHHHHh
Q 014316 411 LF--SSSSELADQLLVN 425 (427)
Q Consensus 411 l~--~~~~~la~~l~~~ 425 (427)
++ .|++++.+.+.++
T Consensus 291 l~~~~~~~ei~~~v~~~ 307 (335)
T PF04007_consen 291 LYHSTDPDEIVEYVRKN 307 (335)
T ss_pred eEecCCHHHHHHHHHHh
Confidence 66 7788888876554
No 117
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=98.33 E-value=7.8e-07 Score=71.53 Aligned_cols=54 Identities=19% Similarity=0.348 Sum_probs=49.7
Q ss_pred CCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEeCChHHHHHHHHHh
Q 014316 372 SSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQLLVN 425 (427)
Q Consensus 372 s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~~~~~~la~~l~~~ 425 (427)
+...+++++++|+||||+|+|+++.++..+++.++..++.+++++++++++..+
T Consensus 6 ~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~el~~~i~~l 59 (92)
T PF13524_consen 6 SRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYNDPEELAEKIEYL 59 (92)
T ss_pred CCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEECCHHHHHHHHHHH
Confidence 444779999999999999999999999999999999999999999999998875
No 118
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.31 E-value=8.2e-05 Score=78.82 Aligned_cols=275 Identities=12% Similarity=0.063 Sum_probs=145.6
Q ss_pred EEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEE-EeecCCCCCCCCcchhhHHHHHHHHHHHH
Q 014316 10 VVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIH-TMTQWPTIPRGLPKVLKPVLLLLKPLIQF 88 (427)
Q Consensus 10 ~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (427)
++.|+.+|.-.....+.+|.++ .-++.+.+.+++. ..+ .|++.. .+. .....++--..+.+..+++...++
T Consensus 231 I~AGE~SGDlhgA~Li~aLk~~-~P~i~~~GvGG~~-M~a----aG~e~l~d~~--eLsVmG~~EVL~~l~~l~~~~~~l 302 (608)
T PRK01021 231 ISAGEHSGDTLGGNLLKEIKAL-YPDIHCFGVGGPQ-MRA----EGFHPLFNME--EFQVSGFWEVLLALFKLWYRYRKL 302 (608)
T ss_pred EEeccccHHHHHHHHHHHHHhc-CCCcEEEEEccHH-HHh----CcCcccCChH--HhhhhhHHHHHHHHHHHHHHHHHH
Confidence 4567776655556666777765 4467777665543 111 133211 011 000011111122222233333322
Q ss_pred HHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCC--cEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhcc
Q 014316 89 FMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRS--AFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKM 166 (427)
Q Consensus 89 ~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~--p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 166 (427)
.+. + +..+||+++.-+.|.+..-+ +..+++ .|+ |+|+.+---.| . .+..+. +.+.+.
T Consensus 303 ~~~----i-~~~kPD~vIlID~PgFNlrL-AK~lkk-~Gi~ipviyYVsPqVW---A---WR~~Ri--------kki~k~ 361 (608)
T PRK01021 303 YKT----I-LKTNPRTVICIDFPDFHFLL-IKKLRK-RGYKGKIVHYVCPSIW---A---WRPKRK--------TILEKY 361 (608)
T ss_pred HHH----H-HhcCCCEEEEeCCCCCCHHH-HHHHHh-cCCCCCEEEEECccce---e---eCcchH--------HHHHHH
Confidence 111 1 23799999998867666554 554444 464 88775432222 1 122222 223356
Q ss_pred CCEEEEcCHHHHHHHHHhhCCeEEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcc
Q 014316 167 ANGCLCVTQAMQHELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSL 246 (427)
Q Consensus 167 ad~vi~vS~~~~~~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (427)
.|.++|+=....+.+++ .|.+++.+-|.-.+...... .+.+..
T Consensus 362 vD~ll~IfPFE~~~y~~-~gv~v~yVGHPL~d~i~~~~--~~~~~r---------------------------------- 404 (608)
T PRK01021 362 LDLLLLILPFEQNLFKD-SPLRTVYLGHPLVETISSFS--PNLSWK---------------------------------- 404 (608)
T ss_pred hhhheecCccCHHHHHh-cCCCeEEECCcHHhhcccCC--CHHHHH----------------------------------
Confidence 78899998888887765 58887777665112221111 111111
Q ss_pred cccccccCCCCCeEEEEEeec--CCCCCHHHHHHHHH--hhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEE
Q 014316 247 AGIDVFLKPNRPALVVSSTSW--TPDEDFGILLEAAL--MYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT 322 (427)
Q Consensus 247 ~~~~~~~~~~~~~~i~~~g~~--~~~K~~~~Li~a~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 322 (427)
++++.+++.+.+-+.-|+= +-.+.+..+++|++ .+ .++.+|++.
T Consensus 405 --~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l------------------------------~~~l~fvvp 452 (608)
T PRK01021 405 --EQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSL------------------------------ASTHQLLVS 452 (608)
T ss_pred --HHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHh------------------------------ccCeEEEEe
Confidence 1224455556555665642 23355677777776 32 235778775
Q ss_pred eCCC-ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe
Q 014316 323 GKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 394 (427)
Q Consensus 323 G~G~-~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas 394 (427)
...+ ..+.+++..+..++-.+.+.. .++-.+++++||+.+.. .|.+.+|++.+|+|.|..
T Consensus 453 ~a~~~~~~~i~~~~~~~~~~~~~ii~----~~~~~~~m~aaD~aLaa--------SGTaTLEaAL~g~PmVV~ 513 (608)
T PRK01021 453 SANPKYDHLILEVLQQEGCLHSHIVP----SQFRYELMRECDCALAK--------CGTIVLETALNQTPTIVT 513 (608)
T ss_pred cCchhhHHHHHHHHhhcCCCCeEEec----CcchHHHHHhcCeeeec--------CCHHHHHHHHhCCCEEEE
Confidence 4332 234556555443321334432 22347999999999974 677999999999999975
No 119
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=98.03 E-value=0.0021 Score=63.50 Aligned_cols=75 Identities=24% Similarity=0.415 Sum_probs=52.5
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc--cccceec---CCcE---EEe
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC--IEELVKV---DKNG---LLF 412 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g--~~e~v~~---~~~G---~l~ 412 (427)
.+|+..-+ .+++..++++|+..|.- ..+ +++.|-+.+|+|.+....+. -.++++- .+-| ++-
T Consensus 277 p~i~I~~f---~~~~~~ll~gA~~vVSm--~GY-----NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~ 346 (400)
T COG4671 277 PHISIFEF---RNDFESLLAGARLVVSM--GGY-----NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLL 346 (400)
T ss_pred CCeEEEEh---hhhHHHHHHhhheeeec--ccc-----hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeC
Confidence 57999999 99999999999999952 233 37999999999999887433 3333321 1223 333
Q ss_pred -C--ChHHHHHHHHHh
Q 014316 413 -S--SSSELADQLLVN 425 (427)
Q Consensus 413 -~--~~~~la~~l~~~ 425 (427)
+ +++.||++|..+
T Consensus 347 pe~lt~~~La~al~~~ 362 (400)
T COG4671 347 PENLTPQNLADALKAA 362 (400)
T ss_pred cccCChHHHHHHHHhc
Confidence 2 368888887653
No 120
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=98.01 E-value=0.0016 Score=65.34 Aligned_cols=240 Identities=17% Similarity=0.137 Sum_probs=144.3
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
.+||+|.+|. ...+.+.+.+++...++|+-.---+. .+ .+.. .-..+. .+.....||..++.|+..++
T Consensus 91 ~kPD~VlVhG--DT~t~lA~alaa~~~~IpV~HvEAGl-Rt-----~~~~-~PEE~N---R~l~~~~S~~hfapte~ar~ 158 (383)
T COG0381 91 EKPDLVLVHG--DTNTTLAGALAAFYLKIPVGHVEAGL-RT-----GDLY-FPEEIN---RRLTSHLSDLHFAPTEIARK 158 (383)
T ss_pred hCCCEEEEeC--CcchHHHHHHHHHHhCCceEEEeccc-cc-----CCCC-CcHHHH---HHHHHHhhhhhcCChHHHHH
Confidence 8999999998 34555556888999999965432222 10 1111 001111 23456679999999999999
Q ss_pred HHHHhhCCe---EEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCC
Q 014316 180 ELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPN 256 (427)
Q Consensus 180 ~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (427)
+|.+. |.+ +.++-|...+.+.........+ .. .. ..+....+
T Consensus 159 nLl~E-G~~~~~IfvtGnt~iDal~~~~~~~~~~-----------------------------~~-~~----~~~~~~~~ 203 (383)
T COG0381 159 NLLRE-GVPEKRIFVTGNTVIDALLNTRDRVLED-----------------------------SK-IL----AKGLDDKD 203 (383)
T ss_pred HHHHc-CCCccceEEeCChHHHHHHHHHhhhccc-----------------------------hh-hH----Hhhhcccc
Confidence 99876 443 6666665222221110000000 00 00 00011233
Q ss_pred CCeEEEEEeecC-CCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHH
Q 014316 257 RPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI 335 (427)
Q Consensus 257 ~~~~i~~~g~~~-~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~ 335 (427)
+..+++..=|-+ ..+++..+++|+.++.+. ++++.++.-=.-. ..+++..
T Consensus 204 ~~~iLvT~HRreN~~~~~~~i~~al~~i~~~---------------------------~~~~~viyp~H~~--~~v~e~~ 254 (383)
T COG0381 204 KKYILVTAHRRENVGEPLEEICEALREIAEE---------------------------YPDVIVIYPVHPR--PRVRELV 254 (383)
T ss_pred CcEEEEEcchhhcccccHHHHHHHHHHHHHh---------------------------CCCceEEEeCCCC--hhhhHHH
Confidence 344555554444 338999999999999887 6777666644322 4555555
Q ss_pred -HHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec-cCccccceecCCcEEEe
Q 014316 336 -RRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVKVDKNGLLF 412 (427)
Q Consensus 336 -~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~-~~g~~e~v~~~~~G~l~ 412 (427)
+.|+- ++|.+... +...+...+++.|-+.+- .|.+ -.=||-..|+||++-+ ...-+|.++-|.+ .++
T Consensus 255 ~~~L~~~~~v~li~p-l~~~~f~~L~~~a~~ilt---DSGg-----iqEEAp~lg~Pvl~lR~~TERPE~v~agt~-~lv 324 (383)
T COG0381 255 LKRLKNVERVKLIDP-LGYLDFHNLMKNAFLILT---DSGG-----IQEEAPSLGKPVLVLRDTTERPEGVEAGTN-ILV 324 (383)
T ss_pred HHHhCCCCcEEEeCC-cchHHHHHHHHhceEEEe---cCCc-----hhhhHHhcCCcEEeeccCCCCccceecCce-EEe
Confidence 45554 47999888 889999999999866552 3333 5779999999999998 4466776754444 455
Q ss_pred -CChHHHHHHHHHh
Q 014316 413 -SSSSELADQLLVN 425 (427)
Q Consensus 413 -~~~~~la~~l~~~ 425 (427)
.+.+.+.+++..+
T Consensus 325 g~~~~~i~~~~~~l 338 (383)
T COG0381 325 GTDEENILDAATEL 338 (383)
T ss_pred CccHHHHHHHHHHH
Confidence 4556666665443
No 121
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=97.94 E-value=0.00088 Score=70.08 Aligned_cols=262 Identities=14% Similarity=0.082 Sum_probs=131.7
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHh-hcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAM 177 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~ 177 (427)
...-|+|-+|+ +...++..++.. ..+.++-+.+|-...+...++. -++ ...+-+-+. .||.|=+-+...
T Consensus 139 ~~~~D~VWVhD---YhL~llP~~LR~~~~~~~IgfFlHiPFPs~e~fr~---lP~---r~eiL~glL-~aDlIgFqt~~~ 208 (474)
T PF00982_consen 139 YRPGDLVWVHD---YHLMLLPQMLRERGPDARIGFFLHIPFPSSEIFRC---LPW---REEILRGLL-GADLIGFQTFEY 208 (474)
T ss_dssp --TT-EEEEES---GGGTTHHHHHHHTT--SEEEEEE-S----HHHHTT---STT---HHHHHHHHT-TSSEEEESSHHH
T ss_pred CcCCCEEEEeC---CcHHHHHHHHHhhcCCceEeeEEecCCCCHHHHhh---CCc---HHHHHHHhh-cCCEEEEecHHH
Confidence 35789999999 555554555544 4577888888876221111111 111 122222222 589999999988
Q ss_pred HHHHHHh----hCCe-----EEEecCC-C--CCCcCC-CChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhh
Q 014316 178 QHELAQN----WGIK-----ATVLYDQ-P--PEFFHP-TSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFT 244 (427)
Q Consensus 178 ~~~l~~~----~~~~-----~~vi~n~-~--~~~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (427)
.+.+... +|.. -.+.++| . ...|+. ++.+. |.+.... .........+
T Consensus 209 ~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~----~~~~~~~---------------~~v~~~~~~l- 268 (474)
T PF00982_consen 209 ARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDA----FAQLARS---------------PEVQERAEEL- 268 (474)
T ss_dssp HHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHH----HHHHHH----------------S---HHHHHH-
T ss_pred HHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHH----HHhhccC---------------hHHHHHHHHH-
Confidence 8876432 3332 1344555 1 111111 11111 1111000 0000000011
Q ss_pred cccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeC
Q 014316 245 SLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK 324 (427)
Q Consensus 245 ~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~ 324 (427)
+.+ -.++..+|+.+.|+...||+..=+.|+..+.++++.- ..++.|+-++-
T Consensus 269 ---~~~---~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~-----------------------~~kv~liQi~~ 319 (474)
T PF00982_consen 269 ---REK---FKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEY-----------------------RGKVVLIQIAV 319 (474)
T ss_dssp ---HHH---TTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGG-----------------------TTTEEEEEE--
T ss_pred ---HHh---cCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCc-----------------------cCcEEEEEEee
Confidence 111 1222358999999999999999999999998873221 33577776763
Q ss_pred CC--C-------hHHHHHHHHHc----CCC---cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCC
Q 014316 325 GP--D-------KESYEEKIRRL----RLK---RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCG 388 (427)
Q Consensus 325 G~--~-------~~~~~~~~~~l----~l~---~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G 388 (427)
.. + ++++++++.+. |-. -|.++..-++.+++.++|+.||+++.. |.++|.-++..|+.+|.
T Consensus 320 psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvT---slrDGmNLva~Eyva~q 396 (474)
T PF00982_consen 320 PSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVT---SLRDGMNLVAKEYVACQ 396 (474)
T ss_dssp B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE-----SSBS--HHHHHHHHHS
T ss_pred ccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEec---chhhccCCcceEEEEEe
Confidence 21 1 13344444432 322 266665558999999999999999985 88899999999999997
Q ss_pred Cc----EEEeccCccccceecCCcEEEeC--ChHHHHHHHHH
Q 014316 389 LP----VCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLV 424 (427)
Q Consensus 389 ~P----VIas~~~g~~e~v~~~~~G~l~~--~~~~la~~l~~ 424 (427)
.. +|.|...|..+.+.+ ..++++ |.+++|++|.+
T Consensus 397 ~~~~GvLiLSefaGaa~~L~~--~al~VNP~d~~~~A~ai~~ 436 (474)
T PF00982_consen 397 DDNPGVLILSEFAGAAEQLSE--AALLVNPWDIEEVADAIHE 436 (474)
T ss_dssp -TS--EEEEETTBGGGGT-TT--S-EEE-TT-HHHHHHHHHH
T ss_pred cCCCCceEeeccCCHHHHcCC--ccEEECCCChHHHHHHHHH
Confidence 75 777787777777732 237774 57899998875
No 122
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=97.91 E-value=0.0011 Score=69.02 Aligned_cols=137 Identities=7% Similarity=0.041 Sum_probs=99.9
Q ss_pred eEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCC---------ChH
Q 014316 259 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP---------DKE 329 (427)
Q Consensus 259 ~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~---------~~~ 329 (427)
.+|+.+.|+..-||+..=++|+..+.++++.- ..++.|+-+.-.. .+.
T Consensus 256 ~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~-----------------------~gkvvlvQia~psR~~v~~Y~~l~~ 312 (474)
T PRK10117 256 QNIFSVERLDYSKGLPERFLAYEALLEKYPQH-----------------------HGKIRYTQIAPTSRGDVQAYQDIRH 312 (474)
T ss_pred eEEEEecccccccCHHHHHHHHHHHHHhChhh-----------------------cCCEEEEEEcCCCCCccHHHHHHHH
Confidence 48999999999999999999999988872111 2246676665321 122
Q ss_pred HHHHHHHHcC----C-C--cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCC-----cEEEeccC
Q 014316 330 SYEEKIRRLR----L-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL-----PVCAVSYS 397 (427)
Q Consensus 330 ~~~~~~~~l~----l-~--~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~-----PVIas~~~ 397 (427)
++++++.+.+ - + -|.++..-++.+++.++|+.||+++.. |.++|.=++..||.||-. ..|.|...
T Consensus 313 ~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVT---plRDGMNLVAkEyva~q~~~~~GvLILSefA 389 (474)
T PRK10117 313 QLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVT---PLRDGMNLVAKEYVAAQDPANPGVLVLSQFA 389 (474)
T ss_pred HHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEec---ccccccccccchheeeecCCCCccEEEeccc
Confidence 3444444432 1 1 277766558899999999999999985 777888889999999965 37888877
Q ss_pred ccccceecCCcEEEeC--ChHHHHHHHHH
Q 014316 398 CIEELVKVDKNGLLFS--SSSELADQLLV 424 (427)
Q Consensus 398 g~~e~v~~~~~G~l~~--~~~~la~~l~~ 424 (427)
|.++.+. ..++++ |.+++|++|..
T Consensus 390 GaA~~L~---~AllVNP~d~~~~A~Ai~~ 415 (474)
T PRK10117 390 GAANELT---SALIVNPYDRDEVAAALDR 415 (474)
T ss_pred chHHHhC---CCeEECCCCHHHHHHHHHH
Confidence 7777773 367774 57899988865
No 123
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=97.88 E-value=0.0016 Score=63.53 Aligned_cols=229 Identities=16% Similarity=0.163 Sum_probs=130.3
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
.+.+=++.|+-.. +.++++.+..+.+ +.-+.||=|+-.+... ..+...+++..+.+...++..+|++ ++.+..
T Consensus 38 ~r~~rff~HGqFn-~~lwlall~g~~~--~~q~yWhiWGaDLYe~---~~~lk~rlfy~lRR~aq~rvg~v~a-trGD~~ 110 (322)
T PRK02797 38 NRAQRFFLHGQFN-PTLWLALLSGKIK--PKQFYWHIWGADLYEE---SKGLKFRLFYPLRRLAQKRVGHVFA-TRGDLS 110 (322)
T ss_pred CccceEEEecCCC-HHHHHHHHhCCcC--ccceEEEEEChhhhhc---ccchhHHHHHHHHHHHHhhcCeEEE-ecchHH
Confidence 6677777887322 3333333333222 2244577665444311 2333356777888888899999999 777777
Q ss_pred HHH-HhhCCeEEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCC
Q 014316 180 ELA-QNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRP 258 (427)
Q Consensus 180 ~l~-~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (427)
++. +.++.+...+| .|+.....-.. ..-...++.+
T Consensus 111 ~~a~~~~~v~~~lly-------fpt~m~~~l~~-------------------------------------~~~~~~~~~~ 146 (322)
T PRK02797 111 YFAQRHPKVPGSLLY-------FPTRMDPSLNT-------------------------------------MANDRQRAGK 146 (322)
T ss_pred HHHHhcCCCCccEEe-------cCCcchhhhcc-------------------------------------ccccccCCCc
Confidence 754 44444433222 22211100000 0000112233
Q ss_pred eEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEE-eC--CC--ChHHHHH
Q 014316 259 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GK--GP--DKESYEE 333 (427)
Q Consensus 259 ~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~-G~--G~--~~~~~~~ 333 (427)
+.|+.-.+-.+.-++..++++++... ..++++++. |- |. +.+++++
T Consensus 147 ~tIlvGNSgd~SN~Hie~L~~l~~~~-----------------------------~~~v~ii~PlsYp~gn~~Yi~~V~~ 197 (322)
T PRK02797 147 MTILVGNSGDRSNRHIEALRALHQQF-----------------------------GDNVKIIVPMGYPANNQAYIEEVRQ 197 (322)
T ss_pred eEEEEeCCCCCcccHHHHHHHHHHHh-----------------------------CCCeEEEEECCcCCCCHHHHHHHHH
Confidence 33433334556678877777776654 447776554 44 32 2244555
Q ss_pred HHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec-cCccccceecCCcEEE
Q 014316 334 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVKVDKNGLL 411 (427)
Q Consensus 334 ~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~-~~g~~e~v~~~~~G~l 411 (427)
.++++-- +++..+...++.+|+.++++.+|++++-+ ...+++| .++=.+..|+||+-+. .+-..++.+. ..-++
T Consensus 198 ~~~~lF~~~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~--~RQQgiG-nl~lLi~~G~~v~l~r~n~fwqdl~e~-gv~Vl 273 (322)
T PRK02797 198 AGLALFGAENFQILTEKLPFDDYLALLRQCDLGYFIF--ARQQGIG-TLCLLIQLGKPVVLSRDNPFWQDLTEQ-GLPVL 273 (322)
T ss_pred HHHHhcCcccEEehhhhCCHHHHHHHHHhCCEEEEee--chhhHHh-HHHHHHHCCCcEEEecCCchHHHHHhC-CCeEE
Confidence 5666544 67777776699999999999999999852 2227788 4666889999999886 5555554433 33343
Q ss_pred e
Q 014316 412 F 412 (427)
Q Consensus 412 ~ 412 (427)
+
T Consensus 274 f 274 (322)
T PRK02797 274 F 274 (322)
T ss_pred e
Confidence 4
No 124
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=97.80 E-value=0.0025 Score=71.20 Aligned_cols=133 Identities=8% Similarity=0.043 Sum_probs=97.0
Q ss_pred eEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCC----EEEEEEeC-----CCChH
Q 014316 259 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR----LLFIITGK-----GPDKE 329 (427)
Q Consensus 259 ~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~i~G~-----G~~~~ 329 (427)
.+|+.+.|+..-||+..=+.|+..+.++ +|+ +.|+-+.- +++..
T Consensus 340 ~~ilgVDrlD~~KGi~~kl~A~e~~L~~---------------------------~P~~~gkvvlvQia~psr~~~~~y~ 392 (854)
T PLN02205 340 IMLLGVDDMDIFKGISLKLLAMEQLLMQ---------------------------HPEWQGKVVLVQIANPARGKGKDVK 392 (854)
T ss_pred EEEEEccCcccccCHHHHHHHHHHHHHh---------------------------CccccCCEEEEEEecCCCcccHHHH
Confidence 5899999999999999999999999887 554 46665542 22222
Q ss_pred ----HHHHHHHHc----C---CCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCC---------
Q 014316 330 ----SYEEKIRRL----R---LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL--------- 389 (427)
Q Consensus 330 ----~~~~~~~~l----~---l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~--------- 389 (427)
++++++.+. | ..-|.++..-++.+++.++|+.||+++.. +.++|.=++..||.+|..
T Consensus 393 ~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT---~lRDGMNLva~Eyia~~~~~~~~~~~~ 469 (854)
T PLN02205 393 EVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVT---AVRDGMNLIPYEYIISRQGNEKLDKLL 469 (854)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEec---cccccccccchheeEEccCcccccccc
Confidence 333444443 2 22377775558999999999999999985 778888889999999854
Q ss_pred ----------cEEEeccCccccceecCCcEEEe--CChHHHHHHHHH
Q 014316 390 ----------PVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLV 424 (427)
Q Consensus 390 ----------PVIas~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~ 424 (427)
.+|.|...|++..+. ..++| -|.+++|++|.+
T Consensus 470 ~~~~~~~~~gvLiLSEfaGaa~~L~---~Ai~VNP~d~~~~a~ai~~ 513 (854)
T PLN02205 470 GLEPSTPKKSMLVVSEFIGCSPSLS---GAIRVNPWNIDAVADAMDS 513 (854)
T ss_pred ccccccCCCCceEeeeccchhHHhC---cCeEECCCCHHHHHHHHHH
Confidence 366777666555552 35677 457889988765
No 125
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=97.79 E-value=0.0024 Score=63.18 Aligned_cols=242 Identities=17% Similarity=0.183 Sum_probs=134.3
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
.+.+=++.|+-.. +.++++.+..+.+..++ .||=||-.+... ..+...+++..+.+...++...|++ ++.+..
T Consensus 77 ~r~~kff~HGqFn-~~lwlaLl~g~~~~~k~--~WhIWGaDLYe~---~~~~k~rlfy~lRr~aq~rvg~V~a-t~GDl~ 149 (360)
T PF07429_consen 77 DRADKFFLHGQFN-PWLWLALLFGKIKLKKC--YWHIWGADLYED---SRSLKFRLFYFLRRLAQKRVGHVFA-TRGDLA 149 (360)
T ss_pred CccceEEEeccCc-HHHHHHHHcCCccccce--EEEEeCchhhcc---ccccchhHHHHHHHHHHhhcCeEEE-EcchHH
Confidence 6788788887332 33343444433333333 466554433322 1222244555677778788877765 678877
Q ss_pred HHHHhhCCe-EEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCC
Q 014316 180 ELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRP 258 (427)
Q Consensus 180 ~l~~~~~~~-~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (427)
.+++.++.. ...++ .|+..+..... .........+
T Consensus 150 ~~~q~~~~~~~~~ly-------fPt~m~~~~~~-------------------------------------~~~~~~~~~~ 185 (360)
T PF07429_consen 150 YFQQRYPRVPASLLY-------FPTRMDPALTL-------------------------------------SEKNKKNKGK 185 (360)
T ss_pred HHHHHcCCCCceEEE-------cCCCCchhhhc-------------------------------------cccccCCCCc
Confidence 888876432 22222 22211000000 0001112233
Q ss_pred eEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEE-EeCCCC----hHHHHH
Q 014316 259 ALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII-TGKGPD----KESYEE 333 (427)
Q Consensus 259 ~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i-~G~G~~----~~~~~~ 333 (427)
..|+.-.+-.+.-++...+++++... ..++++++ .|-|.. .+++++
T Consensus 186 ltILvGNSgd~sNnHieaL~~L~~~~-----------------------------~~~~kIivPLsYg~~n~~Yi~~V~~ 236 (360)
T PF07429_consen 186 LTILVGNSGDPSNNHIEALEALKQQF-----------------------------GDDVKIIVPLSYGANNQAYIQQVIQ 236 (360)
T ss_pred eEEEEcCCCCCCccHHHHHHHHHHhc-----------------------------CCCeEEEEECCCCCchHHHHHHHHH
Confidence 34443334556667866666655532 34677544 455543 234445
Q ss_pred HHHHc-CCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCC-CCCchHHHHHHcCCCcEEEeccCccccceecCCcEEE
Q 014316 334 KIRRL-RLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG-LDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLL 411 (427)
Q Consensus 334 ~~~~l-~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~-e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l 411 (427)
.++++ +-+++..+...++.+|+.++++.||++++. ..+ .++| .++=.+.+|+||+-+.....-..+++..-=++
T Consensus 237 ~~~~lF~~~~~~iL~e~mpf~eYl~lL~~cDl~if~---~~RQQgiG-nI~lLl~~G~~v~L~~~np~~~~l~~~~ipVl 312 (360)
T PF07429_consen 237 AGKELFGAENFQILTEFMPFDEYLALLSRCDLGIFN---HNRQQGIG-NICLLLQLGKKVFLSRDNPFWQDLKEQGIPVL 312 (360)
T ss_pred HHHHhcCccceeEhhhhCCHHHHHHHHHhCCEEEEe---echhhhHh-HHHHHHHcCCeEEEecCChHHHHHHhCCCeEE
Confidence 55555 335787765449999999999999999986 444 7788 46778999999999986655555544433344
Q ss_pred e-CC---hHHHHHHHHHh
Q 014316 412 F-SS---SSELADQLLVN 425 (427)
Q Consensus 412 ~-~~---~~~la~~l~~~ 425 (427)
+ +| ...++++=+.|
T Consensus 313 f~~d~L~~~~v~ea~rql 330 (360)
T PF07429_consen 313 FYGDELDEALVREAQRQL 330 (360)
T ss_pred eccccCCHHHHHHHHHHH
Confidence 4 23 34555544333
No 126
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=97.79 E-value=3.6e-05 Score=73.71 Aligned_cols=81 Identities=19% Similarity=0.166 Sum_probs=47.6
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhc-------CCcEEEEecccchhhhh----h-hcCCC-chH--------HHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLR-------RSAFIVDWHNFGYTLLS----L-SLGRR-SHF--------VSIYRW 158 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~-------~~p~i~~~h~~~~~~~~----~-~~~~~-~~~--------~~~~~~ 158 (427)
.+|||||+|+ +.+.++..+++... ++|+++|+|+..|.-.. . ..+-. ..+ .....
T Consensus 132 ~~pDIIH~hD---W~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~~~~~~~~~in- 207 (245)
T PF08323_consen 132 WKPDIIHCHD---WHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNLDEYEFYGQIN- 207 (245)
T ss_dssp -S-SEEEEEC---GGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-STTTTEETTEEE-
T ss_pred CCCCEEEecC---chHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccccccccccccC-
Confidence 5899999999 66666555665544 69999999997662110 0 00000 000 00001
Q ss_pred HHHHHhccCCEEEEcCHHHHHHHHHh
Q 014316 159 IEKYYGKMANGCLCVTQAMQHELAQN 184 (427)
Q Consensus 159 ~e~~~~~~ad~vi~vS~~~~~~l~~~ 184 (427)
+.+.....||.|++||+..+++++..
T Consensus 208 ~lk~gi~~AD~v~TVS~~Ya~Ei~~~ 233 (245)
T PF08323_consen 208 FLKAGIVYADKVTTVSPTYAREIQTP 233 (245)
T ss_dssp HHHHHHHHSSEEEESSHHHHHHTTSH
T ss_pred HHHHHHHhcCEeeeCCHHHHHHHhCc
Confidence 23455678999999999999888653
No 127
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=97.77 E-value=0.00045 Score=69.89 Aligned_cols=234 Identities=13% Similarity=0.193 Sum_probs=107.5
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
.+.+++++.+ ..... .......+.++|..||+.+.--........... ........+..|.+++.|+.+++
T Consensus 77 ~~Ak~~i~~~--~~~~~---~~~~~~~~~~~i~lwHG~~~K~~g~~~~~~~~~----~~~~~~~~~~~d~~~~~s~~~~~ 147 (369)
T PF04464_consen 77 ARAKYIISDS--YFPDL---IYFKKRKNQKYIQLWHGIPLKKIGYDSPDNKNY----RKNYKRNYRNYDYFIVSSEFEKE 147 (369)
T ss_dssp HHEEEEEESS-----T-----TS---TTSEEEE--SS--SB--GGG-S---TS-----HHHHHHHTT-SEEEESSHHHHH
T ss_pred HhCcEEEECC--CCCcc---cccccCCCcEEEEecCCCcccccchhccccccc----hhhhhhhccCCcEEEECCHHHHH
Confidence 3577887774 11111 122345678899999998541111111000000 00223345678999999999999
Q ss_pred HHHHhhCCe-EEEecCC-C-CCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCC
Q 014316 180 ELAQNWGIK-ATVLYDQ-P-PEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPN 256 (427)
Q Consensus 180 ~l~~~~~~~-~~vi~n~-~-~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (427)
.+.+.++.+ -.++..| | .+.+.........++... ++...+
T Consensus 148 ~~~~~f~~~~~~i~~~G~PR~D~l~~~~~~~~~~i~~~------------------------------------~~~~~~ 191 (369)
T PF04464_consen 148 IFKKAFGYPEDKILVTGYPRNDYLFNKSKENRNRIKKK------------------------------------LGIDKD 191 (369)
T ss_dssp HHHHHTT--GGGEEES--GGGHHHHHSTT-HHHHHHHH------------------------------------TT--SS
T ss_pred HHHHHhccCcceEEEeCCCeEhHHhccCHHHHHHHHHH------------------------------------hccCCC
Confidence 998888776 2444455 2 111111111112222211 233344
Q ss_pred CCeEEEEEeecCCCCCH------HHH--HHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh
Q 014316 257 RPALVVSSTSWTPDEDF------GIL--LEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 328 (427)
Q Consensus 257 ~~~~i~~~g~~~~~K~~------~~L--i~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~ 328 (427)
+. +|+|+=+|.....- ... .+.+..+. .+++.+++-..--
T Consensus 192 ~k-~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~~~-----------------------------~~~~~li~k~Hp~-- 239 (369)
T PF04464_consen 192 KK-VILYAPTWRDNSSNEYFKFFFSDLDFEKLNFLL-----------------------------KNNYVLIIKPHPN-- 239 (369)
T ss_dssp -E-EEEEE----GGG--GGSS----TT-HHHHHHHH-----------------------------TTTEEEEE--SHH--
T ss_pred Cc-EEEEeeccccccccccccccccccCHHHHHHHh-----------------------------CCCcEEEEEeCch--
Confidence 43 88888776654432 111 22222111 4578888866321
Q ss_pred HHHHHHHHH-cC-CCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe--cc-------C
Q 014316 329 ESYEEKIRR-LR-LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV--SY-------S 397 (427)
Q Consensus 329 ~~~~~~~~~-l~-l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas--~~-------~ 397 (427)
....... .. .++|.+... .+++.+++..||++|. . .+.+++|++.+++|||-- +. |
T Consensus 240 --~~~~~~~~~~~~~~i~~~~~---~~~~~~ll~~aDiLIT--D------ySSi~fD~~~l~KPiify~~D~~~Y~~~rg 306 (369)
T PF04464_consen 240 --MKKKFKDFKEDNSNIIFVSD---NEDIYDLLAAADILIT--D------YSSIIFDFLLLNKPIIFYQPDLEEYEKERG 306 (369)
T ss_dssp --HHTT----TT-TTTEEE-TT----S-HHHHHHT-SEEEE--S------S-THHHHHGGGT--EEEE-TTTTTTTTTSS
T ss_pred --hhhchhhhhccCCcEEECCC---CCCHHHHHHhcCEEEE--e------chhHHHHHHHhCCCEEEEeccHHHHhhccC
Confidence 1222221 12 247888665 6699999999999994 1 233899999999999954 22 1
Q ss_pred ccccceecCCcEEEeCChHHHHHHHHH
Q 014316 398 CIEELVKVDKNGLLFSSSSELADQLLV 424 (427)
Q Consensus 398 g~~e~v~~~~~G~l~~~~~~la~~l~~ 424 (427)
...+ ..+...|-.+.+.++|.++|..
T Consensus 307 ~~~~-~~~~~pg~~~~~~~eL~~~i~~ 332 (369)
T PF04464_consen 307 FYFD-YEEDLPGPIVYNFEELIEAIEN 332 (369)
T ss_dssp BSS--TTTSSSS-EESSHHHHHHHHTT
T ss_pred CCCc-hHhhCCCceeCCHHHHHHHHHh
Confidence 2222 2234457788889999988865
No 128
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=97.77 E-value=0.005 Score=61.36 Aligned_cols=103 Identities=17% Similarity=0.112 Sum_probs=68.8
Q ss_pred CCCCCeEEEEEee-cCCCCC--HHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHH
Q 014316 254 KPNRPALVVSSTS-WTPDED--FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 330 (427)
Q Consensus 254 ~~~~~~~i~~~g~-~~~~K~--~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~ 330 (427)
..+++.+++..|. +.+.|. .+...+.+..+.+. +..+++.|...+++.
T Consensus 171 ~~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~-----------------------------~~~ivl~G~~~e~~~ 221 (334)
T TIGR02195 171 DTERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQ-----------------------------GYQVVLFGSAKDHPA 221 (334)
T ss_pred CCCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHC-----------------------------CCEEEEEEChhhHHH
Confidence 3445666666665 445554 44677777666532 467888887766666
Q ss_pred HHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe
Q 014316 331 YEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 394 (427)
Q Consensus 331 ~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas 394 (427)
.+++.+..+-..+.+.|. .+-.++..+++.||++|.. .++ .+==|-|.|+|+|+-
T Consensus 222 ~~~i~~~~~~~~~~l~g~-~sL~el~ali~~a~l~I~~---DSG-----p~HlAaA~~~P~i~l 276 (334)
T TIGR02195 222 GNEIEALLPGELRNLAGE-TSLDEAVDLIALAKAVVTN---DSG-----LMHVAAALNRPLVAL 276 (334)
T ss_pred HHHHHHhCCcccccCCCC-CCHHHHHHHHHhCCEEEee---CCH-----HHHHHHHcCCCEEEE
Confidence 666555433222456776 7899999999999999974 333 344577899999975
No 129
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=97.76 E-value=0.0074 Score=63.90 Aligned_cols=74 Identities=12% Similarity=0.110 Sum_probs=51.7
Q ss_pred CcEEEecCCCCcccHHHHH--hcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceecCCcEEEeC-
Q 014316 341 KRVAFRTMWLSAEDYPLLL--GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKNGLLFS- 413 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l--~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~~~~G~l~~- 413 (427)
+||.+.+ |+|+. +++ ..++++|. ++- . ..+.||+.+|+|+|+....+ ....+...+.|...+
T Consensus 346 ~Nv~i~~-w~Pq~---~lL~hp~v~~fIt-----HGG-~-~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~ 414 (507)
T PHA03392 346 ANVLTQK-WFPQR---AVLKHKNVKAFVT-----QGG-V-QSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDT 414 (507)
T ss_pred CceEEec-CCCHH---HHhcCCCCCEEEe-----cCC-c-ccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEecc
Confidence 5888877 68884 566 56888883 331 2 27999999999999987432 344455566777662
Q ss_pred ---ChHHHHHHHHHh
Q 014316 414 ---SSSELADQLLVN 425 (427)
Q Consensus 414 ---~~~~la~~l~~~ 425 (427)
+.++++++|.++
T Consensus 415 ~~~t~~~l~~ai~~v 429 (507)
T PHA03392 415 VTVSAAQLVLAIVDV 429 (507)
T ss_pred CCcCHHHHHHHHHHH
Confidence 458888888765
No 130
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=97.66 E-value=0.00086 Score=67.41 Aligned_cols=92 Identities=11% Similarity=0.048 Sum_probs=59.4
Q ss_pred CeEEEEEeecC--CCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHH
Q 014316 258 PALVVSSTSWT--PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKI 335 (427)
Q Consensus 258 ~~~i~~~g~~~--~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~ 335 (427)
+.+.++-|+-. -.+-+..+++++.++.++ ...+++.|... .+.+++..
T Consensus 168 ~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~-----------------------------~~~~~i~~a~~-~~~i~~~~ 217 (347)
T PRK14089 168 GTIAFMPGSRKSEIKRLMPIFKELAKKLEGK-----------------------------EKILVVPSFFK-GKDLKEIY 217 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHhhc-----------------------------CcEEEEeCCCc-HHHHHHHH
Confidence 44556666532 224556666787777653 26788887653 34555544
Q ss_pred HHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 336 RRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 336 ~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
.+. ..+.+. ++..++++.||+.++- .|.+.+|++.+|+|.|..-
T Consensus 218 ~~~--~~~~~~------~~~~~~m~~aDlal~~--------SGT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 218 GDI--SEFEIS------YDTHKALLEAEFAFIC--------SGTATLEAALIGTPFVLAY 261 (347)
T ss_pred hcC--CCcEEe------ccHHHHHHhhhHHHhc--------CcHHHHHHHHhCCCEEEEE
Confidence 332 234443 2557899999999973 4567789999999999764
No 131
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=97.56 E-value=0.0031 Score=65.81 Aligned_cols=110 Identities=15% Similarity=0.115 Sum_probs=82.3
Q ss_pred ccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh-
Q 014316 250 DVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK- 328 (427)
Q Consensus 250 ~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~- 328 (427)
+++++.+. .++.+.+ ...|-...+.+.-.++.+. .|+-.|.+-|.|++.
T Consensus 423 ~lglp~~a-vVf~c~~--n~~K~~pev~~~wmqIL~~---------------------------vP~Svl~L~~~~~~~~ 472 (620)
T COG3914 423 QLGLPEDA-VVFCCFN--NYFKITPEVFALWMQILSA---------------------------VPNSVLLLKAGGDDAE 472 (620)
T ss_pred hcCCCCCe-EEEEecC--CcccCCHHHHHHHHHHHHh---------------------------CCCcEEEEecCCCcHH
Confidence 34665553 2333333 4456666777766665555 799999999988654
Q ss_pred --HHHHHHHHHcCCC--cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe
Q 014316 329 --ESYEEKIRRLRLK--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 394 (427)
Q Consensus 329 --~~~~~~~~~l~l~--~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas 394 (427)
..+++++++.|++ +..|.+. .+.++..+.|+-||+++- +...+=..+.+|++-+|+||++-
T Consensus 473 ~~~~l~~la~~~Gv~~eRL~f~p~-~~~~~h~a~~~iADlvLD----TyPY~g~TTa~daLwm~vPVlT~ 537 (620)
T COG3914 473 INARLRDLAEREGVDSERLRFLPP-APNEDHRARYGIADLVLD----TYPYGGHTTASDALWMGVPVLTR 537 (620)
T ss_pred HHHHHHHHHHHcCCChhheeecCC-CCCHHHHHhhchhheeee----cccCCCccchHHHHHhcCceeee
Confidence 4678899999994 7999998 999999999999999995 33334455899999999999974
No 132
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=97.46 E-value=0.08 Score=53.21 Aligned_cols=100 Identities=11% Similarity=0.013 Sum_probs=63.0
Q ss_pred CeEEEEEeecCCCCC--HHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCC--hHHHHH
Q 014316 258 PALVVSSTSWTPDED--FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KESYEE 333 (427)
Q Consensus 258 ~~~i~~~g~~~~~K~--~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~--~~~~~~ 333 (427)
+.+++..|.-.+.|. .+...+.++.+.+. +..++++|...+ .+..++
T Consensus 184 ~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~-----------------------------~~~vvl~ggp~e~e~~~~~~ 234 (352)
T PRK10422 184 NYVVIQPTARQIFKCWDNDKFSAVIDALQAR-----------------------------GYEVVLTSGPDKDDLACVNE 234 (352)
T ss_pred CeEEEecCCCccccCCCHHHHHHHHHHHHHC-----------------------------CCeEEEEcCCChHHHHHHHH
Confidence 456666665444554 44666666666432 467777775322 222344
Q ss_pred HHHHcCCCc-EEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 334 KIRRLRLKR-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 334 ~~~~l~l~~-V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
.++.....+ +.+.|. .+-.++.++++.||++|.. .++ .+==|-|.|+|+|+--
T Consensus 235 i~~~~~~~~~~~l~g~-~sL~el~ali~~a~l~v~n---DSG-----p~HlAaA~g~P~v~lf 288 (352)
T PRK10422 235 IAQGCQTPPVTALAGK-TTFPELGALIDHAQLFIGV---DSA-----PAHIAAAVNTPLICLF 288 (352)
T ss_pred HHHhcCCCccccccCC-CCHHHHHHHHHhCCEEEec---CCH-----HHHHHHHcCCCEEEEE
Confidence 444333233 556776 8899999999999999963 333 3555778999999754
No 133
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=97.45 E-value=0.046 Score=54.87 Aligned_cols=70 Identities=17% Similarity=0.158 Sum_probs=49.8
Q ss_pred CEEEEEEeCCCChHHHHHHHHHcCCC---c-EEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcE
Q 014316 316 RLLFIITGKGPDKESYEEKIRRLRLK---R-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPV 391 (427)
Q Consensus 316 ~~~l~i~G~G~~~~~~~~~~~~l~l~---~-V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PV 391 (427)
++.+++.|...+++..++..+.++-. + +.+.|. .+-.++.++++.||++|.. ..+ .+==|-|.|+|+
T Consensus 213 ~~~vvl~Gg~~e~~~~~~i~~~~~~~~~~~~~~l~g~-~sL~el~ali~~a~l~I~n---DTG-----p~HlAaA~g~P~ 283 (348)
T PRK10916 213 GYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGE-TQLEQAVILIAACKAIVTN---DSG-----LMHVAAALNRPL 283 (348)
T ss_pred CCeEEEEeCHHhHHHHHHHHHhcccccccceeeccCC-CCHHHHHHHHHhCCEEEec---CCh-----HHHHHHHhCCCE
Confidence 56788888766666666665554321 2 456676 7889999999999999964 333 344578899999
Q ss_pred EEe
Q 014316 392 CAV 394 (427)
Q Consensus 392 Ias 394 (427)
|+-
T Consensus 284 val 286 (348)
T PRK10916 284 VAL 286 (348)
T ss_pred EEE
Confidence 965
No 134
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=97.42 E-value=0.015 Score=60.49 Aligned_cols=138 Identities=12% Similarity=0.086 Sum_probs=100.0
Q ss_pred CeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCC--hH------
Q 014316 258 PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KE------ 329 (427)
Q Consensus 258 ~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~--~~------ 329 (427)
.++|+.+-|+..-||+..=+.|+..+.+.+..- ..++.|+-++..+. .+
T Consensus 282 ~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~-----------------------~~kvvliQi~~pSr~~v~~y~~~~ 338 (486)
T COG0380 282 KKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEW-----------------------RGKVVLLQIAPPSREDVEEYQALR 338 (486)
T ss_pred ceEEEEehhcccccCcHHHHHHHHHHHHhChhh-----------------------hCceEEEEecCCCccccHHHHHHH
Confidence 458999999999999999999999998762111 22466766664421 12
Q ss_pred -HHHHHHHHc----CC---CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCC----CcEEEeccC
Q 014316 330 -SYEEKIRRL----RL---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCG----LPVCAVSYS 397 (427)
Q Consensus 330 -~~~~~~~~l----~l---~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G----~PVIas~~~ 397 (427)
++++++.+. |- .-|.|+..-++.+++.++|+.||+++.. |.++|.-++..|+.||- =+.|-|...
T Consensus 339 ~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVt---plrDGMNLvakEyVa~q~~~~G~LiLSeFa 415 (486)
T COG0380 339 LQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVT---PLRDGMNLVAKEYVAAQRDKPGVLILSEFA 415 (486)
T ss_pred HHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeec---cccccccHHHHHHHHhhcCCCCcEEEeccc
Confidence 223333332 22 2377777768999999999999999984 78899999999999984 377888877
Q ss_pred ccccceecCCcEEEeC--ChHHHHHHHHH
Q 014316 398 CIEELVKVDKNGLLFS--SSSELADQLLV 424 (427)
Q Consensus 398 g~~e~v~~~~~G~l~~--~~~~la~~l~~ 424 (427)
|.+..+.+ .++++ |.+++|++|..
T Consensus 416 Gaa~~L~~---AliVNP~d~~~va~ai~~ 441 (486)
T COG0380 416 GAASELRD---ALIVNPWDTKEVADAIKR 441 (486)
T ss_pred cchhhhcc---CEeECCCChHHHHHHHHH
Confidence 76666643 67774 56888888764
No 135
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.29 E-value=0.024 Score=56.68 Aligned_cols=100 Identities=23% Similarity=0.242 Sum_probs=71.0
Q ss_pred CCeEEEEEe-ecCCCCCH--HHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHH
Q 014316 257 RPALVVSST-SWTPDEDF--GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (427)
Q Consensus 257 ~~~~i~~~g-~~~~~K~~--~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~ 333 (427)
++.+++..| +....|.. +...+.+..+.++ .+.+++.|...+.+..++
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~-----------------------------~~~Vvl~g~~~e~e~~~~ 225 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAK-----------------------------GYQVVLFGGPDEEERAEE 225 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHC-----------------------------CCEEEEecChHHHHHHHH
Confidence 456777777 66566654 4666666666654 378899998866666666
Q ss_pred HHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 334 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 334 ~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
+.+.++- .+.+.|. .+-+++..++..||++|.+ .++ .+==|-|.|+|+|+--
T Consensus 226 i~~~~~~-~~~l~~k-~sL~e~~~li~~a~l~I~~---DSg-----~~HlAaA~~~P~I~iy 277 (334)
T COG0859 226 IAKGLPN-AVILAGK-TSLEELAALIAGADLVIGN---DSG-----PMHLAAALGTPTIALY 277 (334)
T ss_pred HHHhcCC-ccccCCC-CCHHHHHHHHhcCCEEEcc---CCh-----HHHHHHHcCCCEEEEE
Confidence 6666542 2337787 8899999999999999975 333 3555889999999875
No 136
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.28 E-value=0.0023 Score=66.38 Aligned_cols=114 Identities=11% Similarity=0.032 Sum_probs=73.7
Q ss_pred cccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCC
Q 014316 247 AGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP 326 (427)
Q Consensus 247 ~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~ 326 (427)
.|.+++++.+. ++++...++ .|=-+..+++..++.++ .|+.+|++...+.
T Consensus 275 ~R~~~gLp~d~-vvF~~fn~~--~KI~p~~l~~W~~IL~~---------------------------vP~S~L~L~~~~~ 324 (468)
T PF13844_consen 275 TRAQYGLPEDA-VVFGSFNNL--FKISPETLDLWARILKA---------------------------VPNSRLWLLRFPA 324 (468)
T ss_dssp ETGGGT--SSS-EEEEE-S-G--GG--HHHHHHHHHHHHH---------------------------STTEEEEEEETST
T ss_pred CHHHcCCCCCc-eEEEecCcc--ccCCHHHHHHHHHHHHh---------------------------CCCcEEEEeeCCH
Confidence 55667777664 355544444 46677888888888887 8999998876543
Q ss_pred -ChHHHHHHHHHcCCC--cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 327 -DKESYEEKIRRLRLK--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 327 -~~~~~~~~~~~l~l~--~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
..+.+++.+++.|++ ++.|.+. .+.++....++.+|+++=+ ..-+=+.+.+||+.+|+|||+-.
T Consensus 325 ~~~~~l~~~~~~~Gv~~~Ri~f~~~-~~~~ehl~~~~~~DI~LDT----~p~nG~TTt~dALwmGVPvVTl~ 391 (468)
T PF13844_consen 325 SGEARLRRRFAAHGVDPDRIIFSPV-APREEHLRRYQLADICLDT----FPYNGGTTTLDALWMGVPVVTLP 391 (468)
T ss_dssp THHHHHHHHHHHTTS-GGGEEEEE----HHHHHHHGGG-SEEE------SSS--SHHHHHHHHHT--EEB--
T ss_pred HHHHHHHHHHHHcCCChhhEEEcCC-CCHHHHHHHhhhCCEEeeC----CCCCCcHHHHHHHHcCCCEEecc
Confidence 346778888899994 7999996 8888888899999999963 22223568999999999999875
No 137
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=97.24 E-value=0.034 Score=53.86 Aligned_cols=74 Identities=26% Similarity=0.208 Sum_probs=53.2
Q ss_pred CEEEEEEeCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe
Q 014316 316 RLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 394 (427)
Q Consensus 316 ~~~l~i~G~G~~~~~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas 394 (427)
++++++.|..++.+..+++.+.++- ..+.+.|. .+..++..+++.||++|.. ..+ .+--|.|.|+|+|+-
T Consensus 153 ~~~ivl~g~~~e~~~~~~i~~~~~~~~~~~~~~~-~~l~e~~~li~~~~l~I~~---Dsg-----~~HlA~a~~~p~i~l 223 (279)
T cd03789 153 GARVVLTGGPAERELAEEIAAALGGPRVVNLAGK-TSLRELAALLARADLVVTN---DSG-----PMHLAAALGTPTVAL 223 (279)
T ss_pred CCEEEEEechhhHHHHHHHHHhcCCCccccCcCC-CCHHHHHHHHHhCCEEEee---CCH-----HHHHHHHcCCCEEEE
Confidence 6788888877666666666665532 23556776 6889999999999999974 222 455567999999987
Q ss_pred ccCc
Q 014316 395 SYSC 398 (427)
Q Consensus 395 ~~~g 398 (427)
-.+.
T Consensus 224 ~g~~ 227 (279)
T cd03789 224 FGPT 227 (279)
T ss_pred ECCC
Confidence 5433
No 138
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=97.22 E-value=0.01 Score=61.06 Aligned_cols=92 Identities=15% Similarity=0.226 Sum_probs=61.6
Q ss_pred CEEEEEEeCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe
Q 014316 316 RLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 394 (427)
Q Consensus 316 ~~~l~i~G~G~~~~~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas 394 (427)
+.++++...+ .+..+ -++ .|+...+. ++. .+++..||++|+. ...+ ++.|++.+|+|+|+-
T Consensus 265 ~~~vi~~~~~-~~~~~------~~~p~n~~v~~~-~p~---~~~l~~ad~vI~h--GG~g-----tt~eaL~~gvP~vv~ 326 (406)
T COG1819 265 DVRVIVSLGG-ARDTL------VNVPDNVIVADY-VPQ---LELLPRADAVIHH--GGAG-----TTSEALYAGVPLVVI 326 (406)
T ss_pred CcEEEEeccc-ccccc------ccCCCceEEecC-CCH---HHHhhhcCEEEec--CCcc-----hHHHHHHcCCCEEEe
Confidence 4666666644 11111 133 47777774 666 5689999999962 2222 799999999999998
Q ss_pred ccCc----cccceecCCcEEEeC----ChHHHHHHHHHh
Q 014316 395 SYSC----IEELVKVDKNGLLFS----SSSELADQLLVN 425 (427)
Q Consensus 395 ~~~g----~~e~v~~~~~G~l~~----~~~~la~~l~~~ 425 (427)
..+. ..+-+++-..|.... +.+.++++++++
T Consensus 327 P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~av~~v 365 (406)
T COG1819 327 PDGADQPLNAERVEELGAGIALPFEELTEERLRAAVNEV 365 (406)
T ss_pred cCCcchhHHHHHHHHcCCceecCcccCCHHHHHHHHHHH
Confidence 7542 455566677787662 467888888765
No 139
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.22 E-value=0.0047 Score=61.61 Aligned_cols=84 Identities=18% Similarity=0.309 Sum_probs=66.5
Q ss_pred cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCC---chHHHHHHcCCCcEEEeccCccccceecCCcEEEeCChHHH
Q 014316 342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDL---PMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSEL 418 (427)
Q Consensus 342 ~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~---p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~~~~~~l 418 (427)
++...|...+.+.++..++-.|+.+.-.+.+.-+++ ++-++|+++||.|.+++...++.....+|+.=++..|..++
T Consensus 238 ~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~~d~kdl 317 (373)
T COG4641 238 NVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVYQDSKDL 317 (373)
T ss_pred hhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEecCHHHH
Confidence 455556523358999999999999874332322333 89999999999999999999999999999988888999999
Q ss_pred HHHHHHh
Q 014316 419 ADQLLVN 425 (427)
Q Consensus 419 a~~l~~~ 425 (427)
.+++..+
T Consensus 318 ~~~~~yl 324 (373)
T COG4641 318 KEKLKYL 324 (373)
T ss_pred HHHHHHH
Confidence 9888765
No 140
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=97.21 E-value=0.0066 Score=61.46 Aligned_cols=241 Identities=18% Similarity=0.174 Sum_probs=134.8
Q ss_pred HHHHHHhccCCEEEEcCHHHHHHHHHhhCCe-EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCC
Q 014316 158 WIEKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEG 235 (427)
Q Consensus 158 ~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (427)
.+|+.....|+.+.+||+-+.-+.......+ =.+.||| +...|... +| |++|..+.
T Consensus 244 C~ERaa~h~AhVFTTVSeITa~EAeHlLkRKPD~itPNGLNV~KFsA~-----HE-FQNLHA~~---------------- 301 (692)
T KOG3742|consen 244 CLERAAAHTAHVFTTVSEITALEAEHLLKRKPDVITPNGLNVKKFSAV-----HE-FQNLHAQK---------------- 301 (692)
T ss_pred HHHHHhhhhhhhhhhHHHHHHHHHHHHHhcCCCeeCCCCcceeehhHH-----HH-HHHHHHHH----------------
Confidence 5788888899999999997775554444333 4566999 65556432 11 22222110
Q ss_pred CCccchhhh-cccccccccCCCCCeEEEEEeecC-CCCCHHHHHHHHHhhHHHHhhhhcc---------CCCch------
Q 014316 236 QKADETIFT-SLAGIDVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNE---------DDSTN------ 298 (427)
Q Consensus 236 ~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~g~~~-~~K~~~~Li~a~~~l~~~~~~~~~~---------~~~~~------ 298 (427)
|.+-..|- .-.-.-+...-++.+.+..+||.+ ..||-+.+||+++.|.-.++-.+.. .+.||
T Consensus 302 -KekIndFVRGHF~GhlDFdLdkTlyfFiAGRYEf~NKGaDmFiEsLaRLN~~Lk~~~s~~TVVaFlImPaktN~FnVes 380 (692)
T KOG3742|consen 302 -KEKINDFVRGHFHGHLDFDLDKTLYFFIAGRYEFSNKGADMFIESLARLNYLLKVSGSPKTVVAFLIMPAKTNSFNVES 380 (692)
T ss_pred -HHHHHHHhhhhccccccccccceEEEEEeeeeeeccCchHHHHHHHHHhHHHHeecCCCceEEEEEEeecCCCccchhh
Confidence 01111110 000011233555667788889988 7899999999999986542211000 01111
Q ss_pred -----------------hhhhhh---------hhcCCccc-------------------CCCCEEEEEEeCCCChHHHHH
Q 014316 299 -----------------EEVFLK---------EISDGKQY-------------------LYPRLLFIITGKGPDKESYEE 333 (427)
Q Consensus 299 -----------------~~~~~~---------~~~~~~~~-------------------~~~~~~l~i~G~G~~~~~~~~ 333 (427)
++.|-+ ++|+-.+. ..|.+.-.=.-+.. .+.+-.
T Consensus 381 LkgqAv~kqL~dtv~~Vk~~~Gkrifd~~l~g~lPd~~ell~~~d~v~lKr~i~a~~r~slPPv~THNm~dDa-~DpiL~ 459 (692)
T KOG3742|consen 381 LKGQAVRKQLWDTVNEVKEKVGKRIFDHCLRGELPDLDELLDKDDLVLLKRCIFALQRQSLPPVCTHNMIDDA-NDPILS 459 (692)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCChHHhhChhHHHHHHHHHHHhccCCCCCceeccccccc-cchHHH
Confidence 111111 11111000 11111111011111 123344
Q ss_pred HHHHcCC-----Cc--EEEecCCCC------cccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcc-
Q 014316 334 KIRRLRL-----KR--VAFRTMWLS------AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI- 399 (427)
Q Consensus 334 ~~~~l~l-----~~--V~f~g~~~~------~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~- 399 (427)
.+++.++ ++ |.|....++ .-|+.++.+.|.++|+| |.+|..|-+..|.-.+|+|-|+|+.+|.
T Consensus 460 ~iRr~~LFN~~~DRVKvifHPEFLss~sPllglDYeeFVRGCHLGVFP---SYYEPWGYTPAECTVMGiPSvtTNlSGFG 536 (692)
T KOG3742|consen 460 SIRRIGLFNSPSDRVKVIFHPEFLSSTSPLLGLDYEEFVRGCHLGVFP---SYYEPWGYTPAECTVMGIPSVTTNLSGFG 536 (692)
T ss_pred HhHhhhcccCcccceEEEecHHHhccCCCCcCCCHHHHhccccccccc---cccCCCCCCchheEEeccccccccccchh
Confidence 5566555 22 666554333 23788999999999998 9999999999999999999999998775
Q ss_pred ---ccceecCC-cEEEe-----C----ChHHHHHHHHHh
Q 014316 400 ---EELVKVDK-NGLLF-----S----SSSELADQLLVN 425 (427)
Q Consensus 400 ---~e~v~~~~-~G~l~-----~----~~~~la~~l~~~ 425 (427)
.|.|.+.. .|+.+ . +.++|++-|.+.
T Consensus 537 cfMeehi~d~~ayGIYIvDRRfks~deSv~qL~~~m~~F 575 (692)
T KOG3742|consen 537 CFMEEHIEDPQAYGIYIVDRRFKSPDESVQQLASFMYEF 575 (692)
T ss_pred hhHHHHhcCchhceEEEEecccCChhhHHHHHHHHHHHH
Confidence 44454333 47665 1 236677666543
No 141
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.19 E-value=0.14 Score=50.07 Aligned_cols=285 Identities=14% Similarity=0.092 Sum_probs=149.2
Q ss_pred CCCCChhH---HHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchh-hHHHHHHHHHHHHH
Q 014316 14 DLGRSPRM---QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVL-KPVLLLLKPLIQFF 89 (427)
Q Consensus 14 ~~~~~~r~---~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 89 (427)
|++.++.+ ......|.++ ||+|.+.|...+. ..+..+.-|+.+..+. . .+...+. +.+....+..
T Consensus 6 DI~n~~hvhfFk~lI~elekk-G~ev~iT~rd~~~-v~~LLd~ygf~~~~Ig--k---~g~~tl~~Kl~~~~eR~~---- 74 (346)
T COG1817 6 DIGNPPHVHFFKNLIWELEKK-GHEVLITCRDFGV-VTELLDLYGFPYKSIG--K---HGGVTLKEKLLESAERVY---- 74 (346)
T ss_pred EcCCcchhhHHHHHHHHHHhC-CeEEEEEEeecCc-HHHHHHHhCCCeEeec--c---cCCccHHHHHHHHHHHHH----
Confidence 34444443 3345678886 9999999866544 5566677788888887 2 2111111 1111111111
Q ss_pred HHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCE
Q 014316 90 MLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANG 169 (427)
Q Consensus 90 ~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ 169 (427)
.+ .. +....+||+.+.-..+. +...++..|+|.|+-..+- . ...-+++....||.
T Consensus 75 ~L-~k-i~~~~kpdv~i~~~s~~------l~rvafgLg~psIi~~D~e-h----------------A~~qnkl~~Pla~~ 129 (346)
T COG1817 75 KL-SK-IIAEFKPDVAIGKHSPE------LPRVAFGLGIPSIIFVDNE-H----------------AEAQNKLTLPLADV 129 (346)
T ss_pred HH-HH-HHhhcCCceEeecCCcc------hhhHHhhcCCceEEecCCh-h----------------HHHHhhcchhhhhh
Confidence 11 11 11237999887733111 3455667799987643322 1 01225566778999
Q ss_pred EEEcCHHHHHHHHHhhCCeEEE-ecCC-----CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhh
Q 014316 170 CLCVTQAMQHELAQNWGIKATV-LYDQ-----PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIF 243 (427)
Q Consensus 170 vi~vS~~~~~~l~~~~~~~~~v-i~n~-----~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (427)
+++.+-.....+......+..+ -+|| +...|.|.+ +.+.+
T Consensus 130 ii~P~~~~~~~~~~~G~~p~~i~~~~giae~~~v~~f~pd~-----evlke----------------------------- 175 (346)
T COG1817 130 IITPEAIDEEELLDFGADPNKISGYNGIAELANVYGFVPDP-----EVLKE----------------------------- 175 (346)
T ss_pred eecccccchHHHHHhCCCccceecccceeEEeecccCCCCH-----HHHHH-----------------------------
Confidence 9888877777766653333333 3455 122344432 22222
Q ss_pred hcccccccccCCCCCeEEEEEe-----ecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEE
Q 014316 244 TSLAGIDVFLKPNRPALVVSST-----SWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL 318 (427)
Q Consensus 244 ~~~~~~~~~~~~~~~~~i~~~g-----~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (427)
+++..+.+.+++=-- -....++.+.+-++++++.+. + .
T Consensus 176 -------Lgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~----------------------------g--i 218 (346)
T COG1817 176 -------LGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKY----------------------------G--I 218 (346)
T ss_pred -------cCCCCCCceEEEeeccccceeeccccchhhHHHHHHHHHhC----------------------------c--E
Confidence 245555553332111 122345666778888887763 3 3
Q ss_pred EEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC-
Q 014316 319 FIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS- 397 (427)
Q Consensus 319 l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~- 397 (427)
++|--. .+.++..++. .++...- +.-|-.+++--|++++- . -|.-.-||...|+|.|++.-|
T Consensus 219 V~ipr~----~~~~eife~~--~n~i~pk---~~vD~l~Llyya~lvig-----~---ggTMarEaAlLGtpaIs~~pGk 281 (346)
T COG1817 219 VLIPRE----KEQAEIFEGY--RNIIIPK---KAVDTLSLLYYATLVIG-----A---GGTMAREAALLGTPAISCYPGK 281 (346)
T ss_pred EEecCc----hhHHHHHhhh--ccccCCc---ccccHHHHHhhhheeec-----C---CchHHHHHHHhCCceEEecCCc
Confidence 333222 2333344432 2333211 13344457777888873 2 234578999999999999833
Q ss_pred --ccccceecCCcEEEeC--Ch-HHHHHHHHH
Q 014316 398 --CIEELVKVDKNGLLFS--SS-SELADQLLV 424 (427)
Q Consensus 398 --g~~e~v~~~~~G~l~~--~~-~~la~~l~~ 424 (427)
.+.+.. -+.|.++. |+ +.++-+++.
T Consensus 282 ll~vdk~l--ie~G~~~~s~~~~~~~~~a~~~ 311 (346)
T COG1817 282 LLAVDKYL--IEKGLLYHSTDEIAIVEYAVRN 311 (346)
T ss_pred cccccHHH--HhcCceeecCCHHHHHHHHHHH
Confidence 233333 24677773 33 444444433
No 142
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=97.08 E-value=0.26 Score=49.19 Aligned_cols=71 Identities=15% Similarity=0.116 Sum_probs=47.3
Q ss_pred CEEEEEEeCCCC--hHHHHHHHHHcCCCc-EEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEE
Q 014316 316 RLLFIITGKGPD--KESYEEKIRRLRLKR-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC 392 (427)
Q Consensus 316 ~~~l~i~G~G~~--~~~~~~~~~~l~l~~-V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVI 392 (427)
+..+++.|...+ .+..++..+..+-.+ +.+.|. .+-.++.++++.||++|.. .++ .+==|-|.|+|+|
T Consensus 213 ~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~-~sL~el~ali~~a~l~Vs~---DSG-----p~HlAaA~g~p~v 283 (344)
T TIGR02201 213 GYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGK-LTLPQLAALIDHARLFIGV---DSV-----PMHMAAALGTPLV 283 (344)
T ss_pred CCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCC-CCHHHHHHHHHhCCEEEec---CCH-----HHHHHHHcCCCEE
Confidence 467788885432 223444444433333 556776 8899999999999999964 333 3555788999999
Q ss_pred Eec
Q 014316 393 AVS 395 (427)
Q Consensus 393 as~ 395 (427)
+--
T Consensus 284 ~Lf 286 (344)
T TIGR02201 284 ALF 286 (344)
T ss_pred EEE
Confidence 753
No 143
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=96.71 E-value=0.18 Score=49.75 Aligned_cols=130 Identities=16% Similarity=0.079 Sum_probs=76.5
Q ss_pred CCCeEEEEEeecCCCCCH--HHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh-HHHH
Q 014316 256 NRPALVVSSTSWTPDEDF--GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESYE 332 (427)
Q Consensus 256 ~~~~~i~~~g~~~~~K~~--~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~-~~~~ 332 (427)
+++.+++..|.=.+.|.. +...+.+..+.++ +..+++.|.|+.+ +..+
T Consensus 178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~-----------------------------~~~~vl~~g~~~e~~~~~ 228 (319)
T TIGR02193 178 PAPYAVLLHATSRDDKTWPEERWRELARLLLAR-----------------------------GLQIVLPWGNDAEKQRAE 228 (319)
T ss_pred CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHC-----------------------------CCeEEEeCCCHHHHHHHH
Confidence 345566666653455544 5666666666432 4677777655533 4444
Q ss_pred HHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceec-C-CcEE
Q 014316 333 EKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV-D-KNGL 410 (427)
Q Consensus 333 ~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~-~-~~G~ 410 (427)
++.+.+ .+..+.|. .+-.++.++++.||++|.. .++ .+==|-|.|+|+|+--.+..+.-... + ...+
T Consensus 229 ~i~~~~--~~~~l~g~-~sL~el~ali~~a~l~I~~---DSg-----p~HlAaa~g~P~i~lfg~t~p~~~~P~~~~~~~ 297 (319)
T TIGR02193 229 RIAEAL--PGAVVLPK-MSLAEVAALLAGADAVVGV---DTG-----LTHLAAALDKPTVTLYGATDPGRTGGYGKPNVA 297 (319)
T ss_pred HHHhhC--CCCeecCC-CCHHHHHHHHHcCCEEEeC---CCh-----HHHHHHHcCCCEEEEECCCCHhhcccCCCCceE
Confidence 444433 34456787 8899999999999999974 333 34447788999997643222211111 1 1122
Q ss_pred Ee------CChHHHHHHHHHh
Q 014316 411 LF------SSSSELADQLLVN 425 (427)
Q Consensus 411 l~------~~~~~la~~l~~~ 425 (427)
+. -++++..++++++
T Consensus 298 ~~~~~~~~I~~~~V~~ai~~~ 318 (319)
T TIGR02193 298 LLGESGANPTPDEVLAALEEL 318 (319)
T ss_pred EccCccCCCCHHHHHHHHHhh
Confidence 22 1367888887764
No 144
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=96.67 E-value=0.41 Score=47.49 Aligned_cols=75 Identities=20% Similarity=0.142 Sum_probs=54.2
Q ss_pred EEEEEEeCCCChHHHHHHHHHcC--CCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe
Q 014316 317 LLFIITGKGPDKESYEEKIRRLR--LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 394 (427)
Q Consensus 317 ~~l~i~G~G~~~~~~~~~~~~l~--l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas 394 (427)
..+.|...--..++.++..+++- ...+.+... -+.+-+..+|+.||.+++... |. +=+.||.++|+||..-
T Consensus 183 ~~~~vttSRRTp~~~~~~L~~~~~~~~~~~~~~~-~~~nPy~~~La~ad~i~VT~D-Sv-----SMvsEA~~tG~pV~v~ 255 (311)
T PF06258_consen 183 GSLLVTTSRRTPPEAEAALRELLKDNPGVYIWDG-TGENPYLGFLAAADAIVVTED-SV-----SMVSEAAATGKPVYVL 255 (311)
T ss_pred CeEEEEcCCCCcHHHHHHHHHhhcCCCceEEecC-CCCCcHHHHHHhCCEEEEcCc-cH-----HHHHHHHHcCCCEEEe
Confidence 78888887666666666666542 245644444 456669999999999998532 22 2589999999999998
Q ss_pred ccCc
Q 014316 395 SYSC 398 (427)
Q Consensus 395 ~~~g 398 (427)
...+
T Consensus 256 ~l~~ 259 (311)
T PF06258_consen 256 PLPG 259 (311)
T ss_pred cCCC
Confidence 8766
No 145
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=96.51 E-value=0.84 Score=43.80 Aligned_cols=78 Identities=14% Similarity=0.138 Sum_probs=50.6
Q ss_pred CCEEEEEEeCCCChHHHHHHHHH-cCCCc-EEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEE
Q 014316 315 PRLLFIITGKGPDKESYEEKIRR-LRLKR-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC 392 (427)
Q Consensus 315 ~~~~l~i~G~G~~~~~~~~~~~~-l~l~~-V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVI 392 (427)
..+.|++.-.-...+..+..++. +.-.- +.+-+.--..+-+.++++.||..+.. .+|-. -.-||.+.|+||-
T Consensus 196 ~g~~~lisfSRRTp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Adyii~T-aDSin-----M~sEAasTgkPv~ 269 (329)
T COG3660 196 QGGSFLISFSRRTPDTVKSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADYIIST-ADSIN-----MCSEAASTGKPVF 269 (329)
T ss_pred CCceEEEEeecCCcHHHHHHHHhccccCceeEeCCCCCCCCchHHHHhhcceEEEe-cchhh-----hhHHHhccCCCeE
Confidence 35778777765566777777665 33222 33322101345688999999999974 22322 4789999999998
Q ss_pred EeccCc
Q 014316 393 AVSYSC 398 (427)
Q Consensus 393 as~~~g 398 (427)
+-.-.+
T Consensus 270 ~~~~~~ 275 (329)
T COG3660 270 ILEPPN 275 (329)
T ss_pred EEecCC
Confidence 765444
No 146
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=96.45 E-value=0.064 Score=48.39 Aligned_cols=156 Identities=13% Similarity=0.099 Sum_probs=80.3
Q ss_pred CCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCC--CCcchhhHHHHHHHHHHHHHHHHHHHHhhhCCCcEEEEcC
Q 014316 32 MSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPR--GLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQN 109 (427)
Q Consensus 32 ~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~ 109 (427)
.||+|..+|........ +|+++++.. +.... ....+.+.+-.-...-...++....|..+...||+|++|.
T Consensus 2 ~gh~v~fl~~~~~~~~~-----~GV~~~~y~--~~~~~~~~~~~~~~~~e~~~~rg~av~~a~~~L~~~Gf~PDvI~~H~ 74 (171)
T PF12000_consen 2 RGHEVVFLTERKRPPIP-----PGVRVVRYR--PPRGPTPGTHPYVRDFEAAVLRGQAVARAARQLRAQGFVPDVIIAHP 74 (171)
T ss_pred CCCEEEEEecCCCCCCC-----CCcEEEEeC--CCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEcC
Confidence 49999999954332111 588888887 31111 1111111111111111111223333444557899999998
Q ss_pred CCChhHHHHHHHHHh-hcCCcEEEEecccchhhhhhhcC-----CCch---H-HHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 110 PPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLSLSLG-----RRSH---F-VSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 110 p~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~~~~~-----~~~~---~-~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
-..- +..++- ..++|++... .+.|.......+ .... . .++.....-.....||+.++.|+..++
T Consensus 75 GWGe-----~Lflkdv~P~a~li~Y~-E~~y~~~g~d~~FDpe~p~~~~~~~~~r~rN~~~l~~l~~~D~~isPT~wQ~~ 148 (171)
T PF12000_consen 75 GWGE-----TLFLKDVFPDAPLIGYF-EFYYRASGADVGFDPEFPPSLDDRARLRMRNAHNLLALEQADAGISPTRWQRS 148 (171)
T ss_pred Ccch-----hhhHHHhCCCCcEEEEE-EEEecCCCCcCCCCCCCCCCHHHHHHHHHHhHHHHHHHHhCCcCcCCCHHHHH
Confidence 2221 112232 3477866522 221311111111 0111 1 122222333444579999999999998
Q ss_pred HHHHhhCCeEEEecCC-CCCCc
Q 014316 180 ELAQNWGIKATVLYDQ-PPEFF 200 (427)
Q Consensus 180 ~l~~~~~~~~~vi~n~-~~~~f 200 (427)
.+-..+..++.||++| |.+.+
T Consensus 149 ~fP~~~r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 149 QFPAEFRSKISVIHDGIDTDRF 170 (171)
T ss_pred hCCHHHHcCcEEeecccchhhc
Confidence 8877777789999999 76554
No 147
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=96.16 E-value=0.00026 Score=63.31 Aligned_cols=75 Identities=15% Similarity=0.246 Sum_probs=49.2
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc--------cccceecCCcEEEe
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC--------IEELVKVDKNGLLF 412 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g--------~~e~v~~~~~G~l~ 412 (427)
.+|.+.++ .+++.++++.||++|+ ..+ +.++.|++++|+|.|.....+ ....+.+...|..+
T Consensus 55 ~~v~~~~~---~~~m~~~m~~aDlvIs----~aG---~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~ 124 (167)
T PF04101_consen 55 PNVKVFGF---VDNMAELMAAADLVIS----HAG---AGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIML 124 (167)
T ss_dssp CCCEEECS---SSSHHHHHHHHSEEEE----CS----CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCS
T ss_pred CcEEEEec---hhhHHHHHHHcCEEEe----CCC---ccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCcccc
Confidence 57999998 7889999999999995 111 248999999999999877655 22233334444444
Q ss_pred ----CChHHHHHHHHHh
Q 014316 413 ----SSSSELADQLLVN 425 (427)
Q Consensus 413 ----~~~~~la~~l~~~ 425 (427)
.+.+.|+++|.++
T Consensus 125 ~~~~~~~~~L~~~i~~l 141 (167)
T PF04101_consen 125 DESELNPEELAEAIEEL 141 (167)
T ss_dssp ECCC-SCCCHHHHHHCH
T ss_pred CcccCCHHHHHHHHHHH
Confidence 2256688877654
No 148
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=96.16 E-value=0.83 Score=45.18 Aligned_cols=70 Identities=14% Similarity=0.048 Sum_probs=47.5
Q ss_pred CEEEEEEeCCC-ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe
Q 014316 316 RLLFIITGKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 394 (427)
Q Consensus 316 ~~~l~i~G~G~-~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas 394 (427)
+..+++.|.++ +.+..+++++. ..++.+.|. .+-.++..+++.||++|.. .++ .+==|-|+|+|+|+-
T Consensus 210 ~~~ivl~~G~~~e~~~~~~i~~~--~~~~~l~g~-~sL~elaali~~a~l~I~n---DSG-----p~HlA~A~g~p~val 278 (322)
T PRK10964 210 GLRIKLPWGAEHEEQRAKRLAEG--FPYVEVLPK-LSLEQVARVLAGAKAVVSV---DTG-----LSHLTAALDRPNITL 278 (322)
T ss_pred CCeEEEeCCCHHHHHHHHHHHcc--CCcceecCC-CCHHHHHHHHHhCCEEEec---CCc-----HHHHHHHhCCCEEEE
Confidence 45666763344 33444444332 235777787 8899999999999999974 333 455588999999986
Q ss_pred cc
Q 014316 395 SY 396 (427)
Q Consensus 395 ~~ 396 (427)
-.
T Consensus 279 fG 280 (322)
T PRK10964 279 YG 280 (322)
T ss_pred EC
Confidence 43
No 149
>PLN02448 UDP-glycosyltransferase family protein
Probab=96.14 E-value=2.1 Score=44.75 Aligned_cols=76 Identities=14% Similarity=0.136 Sum_probs=47.8
Q ss_pred cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceecC-CcEEEe----
Q 014316 342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVD-KNGLLF---- 412 (427)
Q Consensus 342 ~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~~-~~G~l~---- 412 (427)
++.+.+ |+++.+ +|...++..+. +++ | .++++||+++|+|+|+-...+ ....+.+. +.|+-+
T Consensus 324 ~~~v~~-w~pQ~~---iL~h~~v~~fv---tHg-G-~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~ 394 (459)
T PLN02448 324 MGLVVP-WCDQLK---VLCHSSVGGFW---THC-G-WNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREV 394 (459)
T ss_pred CEEEec-cCCHHH---HhccCccceEE---ecC-c-hhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEeccc
Confidence 666665 788754 56667774332 333 1 238999999999999987443 33334332 445554
Q ss_pred -----CChHHHHHHHHHhc
Q 014316 413 -----SSSSELADQLLVNA 426 (427)
Q Consensus 413 -----~~~~~la~~l~~~~ 426 (427)
-+.++++++++++.
T Consensus 395 ~~~~~~~~~~l~~av~~vl 413 (459)
T PLN02448 395 GEETLVGREEIAELVKRFM 413 (459)
T ss_pred ccCCcCcHHHHHHHHHHHh
Confidence 14578888887764
No 150
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=95.95 E-value=0.11 Score=54.11 Aligned_cols=77 Identities=10% Similarity=-0.128 Sum_probs=50.5
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHH---HHHHH--HHHHHhccCCEEEEcC
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFV---SIYRW--IEKYYGKMANGCLCVT 174 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~---~~~~~--~e~~~~~~ad~vi~vS 174 (427)
..||+||.|. ..+..+|.+++...|+|...+-|.++-+-+..+.-.+..+. ++... .|...++.||.|||-|
T Consensus 400 ~~PdlI~GnY---sDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST 476 (550)
T PF00862_consen 400 GKPDLIIGNY---SDGNLVASLLSRKLGVTQCFIAHSLEKTKYEDSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITST 476 (550)
T ss_dssp S--SEEEEEH---HHHHHHHHHHHHHHT-EEEEE-SS-HHHHHHTTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESS
T ss_pred CCCcEEEecc---CcchHHHHHHHhhcCCceehhhhccccccccccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcc
Confidence 6899999998 88888899999999999999999886543333222333332 22222 3567888999999987
Q ss_pred HHHHH
Q 014316 175 QAMQH 179 (427)
Q Consensus 175 ~~~~~ 179 (427)
.....
T Consensus 477 ~QEI~ 481 (550)
T PF00862_consen 477 YQEIA 481 (550)
T ss_dssp HHHHH
T ss_pred hHhhc
Confidence 66553
No 151
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=95.91 E-value=2.6 Score=43.72 Aligned_cols=57 Identities=18% Similarity=0.208 Sum_probs=38.4
Q ss_pred HHHHHHcCC-CcEEE-ecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC
Q 014316 332 EEKIRRLRL-KRVAF-RTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 332 ~~~~~~l~l-~~V~f-~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~ 397 (427)
+++.+.+.- .++++ ... .+..++..++++||++|-. -.+ .++=|+++|+|+|+-...
T Consensus 297 ~~l~~~~~~~~~~~vi~~~-~~~~e~~~iIs~~dl~ig~---RlH-----a~I~a~~~gvP~i~i~Y~ 355 (426)
T PRK10017 297 LNLRQHVSDPARYHVVMDE-LNDLEMGKILGACELTVGT---RLH-----SAIISMNFGTPAIAINYE 355 (426)
T ss_pred HHHHHhcccccceeEecCC-CChHHHHHHHhhCCEEEEe---cch-----HHHHHHHcCCCEEEeeeh
Confidence 445555543 23333 333 4566888999999999952 222 578899999999998743
No 152
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=95.82 E-value=2 Score=41.87 Aligned_cols=60 Identities=23% Similarity=0.208 Sum_probs=40.6
Q ss_pred CChHHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEecc
Q 014316 326 PDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 396 (427)
Q Consensus 326 ~~~~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~ 396 (427)
.+.+..+++.+.+.-. .+ +.. .+.+++..++++||++|.- ..+ .++=|+.+|+|+|+-..
T Consensus 217 ~D~~~~~~l~~~~~~~~~i--~~~-~~~~e~~~~i~~~~~vI~~---RlH-----~~I~A~~~gvP~i~i~y 277 (298)
T TIGR03609 217 QDLPLARALRDQLLGPAEV--LSP-LDPEELLGLFASARLVIGM---RLH-----ALILAAAAGVPFVALSY 277 (298)
T ss_pred hhHHHHHHHHHhcCCCcEE--Eec-CCHHHHHHHHhhCCEEEEe---chH-----HHHHHHHcCCCEEEeec
Confidence 3444445555554322 33 233 6788999999999999852 333 58889999999998753
No 153
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=95.78 E-value=0.062 Score=52.17 Aligned_cols=80 Identities=11% Similarity=0.085 Sum_probs=54.6
Q ss_pred hhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhh-hhhh-----cC-----CCchHHHHHHHHHHHHhcc
Q 014316 98 KIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTL-LSLS-----LG-----RRSHFVSIYRWIEKYYGKM 166 (427)
Q Consensus 98 ~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~-~~~~-----~~-----~~~~~~~~~~~~e~~~~~~ 166 (427)
...+.|++|+.+ ..-+.+++.+++..+|.|+++|-|+. |+- .... .- -+..+.+++..+-+.+++.
T Consensus 169 ~lP~advyHsvs--tGyAgl~g~~~k~~~g~P~lLTEHGI-Y~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l~~~~Y~~ 245 (268)
T PF11997_consen 169 PLPKADVYHSVS--TGYAGLLGALAKYRYGRPFLLTEHGI-YTREREIEILQADWIWESPYVRDLWIRFFESLSRLAYRA 245 (268)
T ss_pred cCCCCCEEecCC--ccHHHHHHHHHHHHhCCCEEEecCCc-cHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 346889999998 23344557788888999999999999 521 1110 10 1122244566677888999
Q ss_pred CCEEEEcCHHHHHH
Q 014316 167 ANGCLCVTQAMQHE 180 (427)
Q Consensus 167 ad~vi~vS~~~~~~ 180 (427)
||.|+++++..++.
T Consensus 246 Ad~I~~l~~~n~~~ 259 (268)
T PF11997_consen 246 ADRITPLYEYNREW 259 (268)
T ss_pred hCeecccchhhHHH
Confidence 99999999976643
No 154
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=95.45 E-value=0.037 Score=45.01 Aligned_cols=83 Identities=14% Similarity=0.129 Sum_probs=59.7
Q ss_pred EEEEeC-CCChHHHHHHHHHcCCCcEEE--ecCCCCccc--HHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEE
Q 014316 319 FIITGK-GPDKESYEEKIRRLRLKRVAF--RTMWLSAED--YPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA 393 (427)
Q Consensus 319 l~i~G~-G~~~~~~~~~~~~l~l~~V~f--~g~~~~~~~--~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIa 393 (427)
+.|+|+ ......+++.+++.|.+.+.+ .+. ..... ++..++.+|++|++...-+....-.+--+|-..|+|++-
T Consensus 2 vliVGG~~~~~~~~~~~~~~~G~~~~~hg~~~~-~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~ 80 (97)
T PF10087_consen 2 VLIVGGREDRERRYKRILEKYGGKLIHHGRDGG-DEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIY 80 (97)
T ss_pred EEEEcCCcccHHHHHHHHHHcCCEEEEEecCCC-CccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEE
Confidence 456665 567789999999999877777 333 34444 899999999999974433444444456677888999999
Q ss_pred eccCccccc
Q 014316 394 VSYSCIEEL 402 (427)
Q Consensus 394 s~~~g~~e~ 402 (427)
++..+...+
T Consensus 81 ~~~~~~~~l 89 (97)
T PF10087_consen 81 SRSRGVSSL 89 (97)
T ss_pred ECCCCHHHH
Confidence 986665543
No 155
>PRK14986 glycogen phosphorylase; Provisional
Probab=95.41 E-value=0.072 Score=58.71 Aligned_cols=144 Identities=16% Similarity=0.159 Sum_probs=100.0
Q ss_pred cCCCCCeEEEEEeecCCCCCHHH-HHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCC-CChHH
Q 014316 253 LKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDKES 330 (427)
Q Consensus 253 ~~~~~~~~i~~~g~~~~~K~~~~-Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G-~~~~~ 330 (427)
+.++ .+.++++-|+...|.... ++..+..+.+-. +.+........+++.|+- |....
T Consensus 539 ldp~-sLfd~qakR~heYKRq~LNil~~i~ry~~i~--------------------~~p~~~~~P~~~IFaGKAaP~y~~ 597 (815)
T PRK14986 539 VNPK-ALFDVQIKRIHEYKRQLMNVLHVITRYNRIK--------------------ADPDAKWVPRVNIFAGKAASAYYM 597 (815)
T ss_pred cCcc-cceeeeehhhhhhhhhhHHHhhhHHHHHHHH--------------------hCCCcCCCCeEEEEeecCCCCcHH
Confidence 3444 357899999999999988 777776665431 111111123789999964 33332
Q ss_pred HHHHHHHc-----------CC-C--cEEEecCCCCcccHHHHHhcCcEEEeeccCCCC-CCCchHHHHHHcCCCcEEEec
Q 014316 331 YEEKIRRL-----------RL-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG-LDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 331 ~~~~~~~l-----------~l-~--~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~-e~~p~~~lEama~G~PVIas~ 395 (427)
.++.++.. .+ + +|.|+.. .+.+-...++.+||+.... |..+ |..|..=+=+|..|.+.++|-
T Consensus 598 aK~iIk~I~~va~~in~Dp~v~~~lkVVFlen-Y~vslAe~lipg~Dv~eqi--s~ag~EASGTsnMK~alNGaLtlgtl 674 (815)
T PRK14986 598 AKHIIHLINDVAKVINNDPQIGDKLKVVFIPN-YSVSLAQLIIPAADLSEQI--SLAGTEASGTSNMKFALNGALTIGTL 674 (815)
T ss_pred HHHHHHHHHHHHHHhccChhhcCceeEEEeCC-CCHHHHHHhhhhhhhhhhC--CCCCccccCcchhhHHhcCceeeecc
Confidence 23322221 12 1 5899887 7778888999999999863 2333 888888888999999999999
Q ss_pred cCccccceec--CCcEEEeC-ChHHHHH
Q 014316 396 YSCIEELVKV--DKNGLLFS-SSSELAD 420 (427)
Q Consensus 396 ~~g~~e~v~~--~~~G~l~~-~~~~la~ 420 (427)
.|...|+.++ ++||++++ +.++.++
T Consensus 675 DG~nvEi~e~vG~eN~~~fG~~~~ev~~ 702 (815)
T PRK14986 675 DGANVEMLEHVGEENIFIFGNTAEEVEA 702 (815)
T ss_pred CCchhHHHHhcCCCcEEEeCCCHHHHHH
Confidence 9999998876 88999994 4455443
No 156
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=95.35 E-value=0.062 Score=42.66 Aligned_cols=72 Identities=10% Similarity=-0.021 Sum_probs=42.9
Q ss_pred CceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEE
Q 014316 54 PSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVD 133 (427)
Q Consensus 54 ~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~ 133 (427)
.|++++.+|..+. ..-..++ .+...+.+++.++.+ ++.||||.|+..+..+.- +.+.++..|.+.|+|
T Consensus 14 ngLKVYYlP~~~~--~~~~t~P--------t~~~~~pl~R~Ilir-E~I~IVHgH~a~S~l~hE-~i~hA~~mGlktVfT 81 (90)
T PF08288_consen 14 NGLKVYYLPLKVF--YNQCTLP--------TLFGSFPLLRNILIR-ERIDIVHGHQAFSTLCHE-AILHARTMGLKTVFT 81 (90)
T ss_pred CCeEEEeecchhh--hcCcchH--------HHHHhhHHHHHHHHH-cCeeEEEeehhhhHHHHH-HHHHHHhCCCcEEee
Confidence 4899999994321 1111111 112222233333332 899999999833322222 567788899999999
Q ss_pred eccc
Q 014316 134 WHNF 137 (427)
Q Consensus 134 ~h~~ 137 (427)
=|.+
T Consensus 82 DHSL 85 (90)
T PF08288_consen 82 DHSL 85 (90)
T ss_pred cccc
Confidence 9976
No 157
>PLN02173 UDP-glucosyl transferase family protein
Probab=95.29 E-value=4.5 Score=42.29 Aligned_cols=77 Identities=12% Similarity=0.149 Sum_probs=50.5
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceecC-CcEEEeC--
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVD-KNGLLFS-- 413 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~~-~~G~l~~-- 413 (427)
+++.+.+ |+++ .++|+..++..+. +++- .+.++||+++|+|+|+-..-+ ....+.+. +.|+-+.
T Consensus 317 ~~~~i~~-W~PQ---~~iL~H~~v~~Fv---tHcG--wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~ 387 (449)
T PLN02173 317 DKSLVLK-WSPQ---LQVLSNKAIGCFM---THCG--WNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAE 387 (449)
T ss_pred CceEEeC-CCCH---HHHhCCCccceEE---ecCc--cchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeec
Confidence 4677776 8997 4577777765553 4431 138999999999999986322 33344332 4555541
Q ss_pred ------ChHHHHHHHHHhc
Q 014316 414 ------SSSELADQLLVNA 426 (427)
Q Consensus 414 ------~~~~la~~l~~~~ 426 (427)
+.+++++++++++
T Consensus 388 ~~~~~~~~e~v~~av~~vm 406 (449)
T PLN02173 388 KESGIAKREEIEFSIKEVM 406 (449)
T ss_pred ccCCcccHHHHHHHHHHHh
Confidence 4588888888764
No 158
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=95.20 E-value=0.14 Score=55.93 Aligned_cols=133 Identities=15% Similarity=0.068 Sum_probs=97.2
Q ss_pred CeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCC-CChHHHHH---
Q 014316 258 PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDKESYEE--- 333 (427)
Q Consensus 258 ~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G-~~~~~~~~--- 333 (427)
.+.++++-|+...|.....+.-+..+.+.+.+ ...|.+.+++.|+- |.....++
T Consensus 487 ~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~----------------------d~~prv~~iFaGKAhP~y~~aK~iIk 544 (750)
T COG0058 487 ALFDGQARRIHEYKRQLLNLLDIERLYRILKE----------------------DWVPRVQIIFAGKAHPADYAAKEIIK 544 (750)
T ss_pred cceeeeehhhhhhhhhHHhHhhHHHHHHHHhc----------------------CCCCceEEEEeccCCCcchHHHHHHH
Confidence 35899999999999887776655555544210 12577888999964 33222222
Q ss_pred ----HHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcccccee--cC
Q 014316 334 ----KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVK--VD 406 (427)
Q Consensus 334 ----~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~--~~ 406 (427)
.++..+. .+|.|+.. .+..-...++.+||+-..-+ ....|..|..=+=+|..|.+.|+|-.|...|+.+ .+
T Consensus 545 ~I~~~a~~in~~lkVvFl~n-YdvslA~~iipa~Dvweqis-~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~ 622 (750)
T COG0058 545 LINDVADVINNKLKVVFLPN-YDVSLAELLIPAADVWEQIP-TAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGG 622 (750)
T ss_pred HHHHHHHhhcccceEEEeCC-CChhHHHhhcccccccccCC-CCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCC
Confidence 2333333 36899887 77778888999999998631 1233888888888999999999999999999987 89
Q ss_pred CcEEEeCC
Q 014316 407 KNGLLFSS 414 (427)
Q Consensus 407 ~~G~l~~~ 414 (427)
+||+++++
T Consensus 623 ~N~~~fG~ 630 (750)
T COG0058 623 ENGWIFGE 630 (750)
T ss_pred CceEEeCC
Confidence 99999954
No 159
>PLN03007 UDP-glucosyltransferase family protein
Probab=94.91 E-value=6 Score=41.71 Aligned_cols=47 Identities=19% Similarity=0.326 Sum_probs=33.8
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEecc
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 396 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~ 396 (427)
.++...+ |+++ .++|+.+++..+. +++ | -+.++||+.+|+|+|+...
T Consensus 345 ~g~~v~~-w~PQ---~~iL~h~~v~~fv---tH~-G-~nS~~Eal~~GVP~v~~P~ 391 (482)
T PLN03007 345 KGLIIRG-WAPQ---VLILDHQATGGFV---THC-G-WNSLLEGVAAGLPMVTWPV 391 (482)
T ss_pred CCEEEec-CCCH---HHHhccCccceee---ecC-c-chHHHHHHHcCCCeeeccc
Confidence 3677766 7888 5678888774443 333 1 2389999999999999874
No 160
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=94.81 E-value=0.16 Score=56.16 Aligned_cols=142 Identities=15% Similarity=0.146 Sum_probs=98.7
Q ss_pred CCCCCeEEEEEeecCCCCCHHH-HHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCC-CChHHH
Q 014316 254 KPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDKESY 331 (427)
Q Consensus 254 ~~~~~~~i~~~g~~~~~K~~~~-Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G-~~~~~~ 331 (427)
.++. +..+++-|+...|.... ++..+..+.+- .+.+........|++.|+- |.....
T Consensus 527 dp~s-lfdvq~KR~heYKRq~LNil~ii~~y~~i--------------------~~~p~~~~~P~~~IFaGKAaP~y~~a 585 (797)
T cd04300 527 DPDS-LFDVQVKRIHEYKRQLLNVLHIIHLYNRI--------------------KENPNADIVPRTFIFGGKAAPGYYMA 585 (797)
T ss_pred CCCc-cEEEEeeechhhhhhhhHHHhhHHHHHHH--------------------HhCCCcCCCCeEEEEeccCCCCcHHH
Confidence 4443 58899999999999988 77776666543 1111112223789999964 332222
Q ss_pred HHHHHH---c--------CCC---cEEEecCCCCcccHHHHHhcCcEEEeeccCCC-CCCCchHHHHHHcCCCcEEEecc
Q 014316 332 EEKIRR---L--------RLK---RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-GLDLPMKVVDMFGCGLPVCAVSY 396 (427)
Q Consensus 332 ~~~~~~---l--------~l~---~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~-~e~~p~~~lEama~G~PVIas~~ 396 (427)
++.++. + .+. +|.|+.. .+..-...++.+||+..-- |.. .|..|..=+=+|..|.+.++|-.
T Consensus 586 K~iIklI~~va~~in~Dp~v~~~lkVVFlen-Y~VslAe~iipaaDvseqi--s~ag~EASGTsnMK~~lNGaltlgtlD 662 (797)
T cd04300 586 KLIIKLINAVADVVNNDPDVGDKLKVVFLPN-YNVSLAEKIIPAADLSEQI--STAGKEASGTGNMKFMLNGALTIGTLD 662 (797)
T ss_pred HHHHHHHHHHHHHhccChhcCCceEEEEeCC-CChHHHHHhhhhhhhhhhC--CCCCccccCCchhhHHhcCceeeeccc
Confidence 222222 1 121 5999887 7788888999999999863 233 38888888889999999999999
Q ss_pred Cccccceec--CCcEEEeCC-hHHHH
Q 014316 397 SCIEELVKV--DKNGLLFSS-SSELA 419 (427)
Q Consensus 397 ~g~~e~v~~--~~~G~l~~~-~~~la 419 (427)
|...|+.++ ++|+++|+. .++..
T Consensus 663 GanvEi~e~vG~eN~fiFG~~~~ev~ 688 (797)
T cd04300 663 GANVEIAEEVGEENIFIFGLTAEEVE 688 (797)
T ss_pred chhHHHHHHhCcCcEEEeCCCHHHHH
Confidence 999998877 889999954 45544
No 161
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=94.61 E-value=0.11 Score=57.06 Aligned_cols=144 Identities=17% Similarity=0.176 Sum_probs=99.9
Q ss_pred cCCCCCeEEEEEeecCCCCCHHH-HHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCC-CChHH
Q 014316 253 LKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDKES 330 (427)
Q Consensus 253 ~~~~~~~~i~~~g~~~~~K~~~~-Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G-~~~~~ 330 (427)
+.++. +..+++-|+...|.... ++..+..+.+- .+.+........|++.|+- |....
T Consensus 523 ldp~s-lfdvq~KR~heYKRq~LNil~ii~~y~~i--------------------~~~p~~~~~P~~~IFaGKAaP~y~~ 581 (794)
T TIGR02093 523 VDPNS-IFDVQVKRLHEYKRQLLNVLHVIYLYNRI--------------------KEDPPKDIVPRTVIFGGKAAPGYHM 581 (794)
T ss_pred cCccc-cchhhheechhhhHHHHHHhhhHHHHHHH--------------------HhCCCcCCCCeEEEEEecCCCCcHH
Confidence 34443 47889999999999888 77777666543 1111112223689999964 33222
Q ss_pred HHHHH---HHcC--------C-C--cEEEecCCCCcccHHHHHhcCcEEEeeccCCCC-CCCchHHHHHHcCCCcEEEec
Q 014316 331 YEEKI---RRLR--------L-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG-LDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 331 ~~~~~---~~l~--------l-~--~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~-e~~p~~~lEama~G~PVIas~ 395 (427)
.++.+ .... + + +|.|+.. .+..-...++.+||+..-- |..+ |..|..=+=+|..|.+.|+|-
T Consensus 582 aK~iIklI~~va~~iN~Dp~v~~~lkVVFlen-Y~VslAe~iipaaDvseqi--stag~EASGTsnMK~alNGaltlgtl 658 (794)
T TIGR02093 582 AKLIIKLINSVAEVVNNDPAVGDKLKVVFVPN-YNVSLAELIIPAADLSEQI--STAGKEASGTGNMKFMLNGALTIGTL 658 (794)
T ss_pred HHHHHHHHHHHHHHhccChhhCCceeEEEeCC-CChHHHHHhhhhhhhhhhC--CCCCccccCcchhHHHhcCcceeecc
Confidence 23222 2222 2 1 5999887 7788888999999999863 2333 888888888999999999999
Q ss_pred cCccccceec--CCcEEEeC-ChHHHHH
Q 014316 396 YSCIEELVKV--DKNGLLFS-SSSELAD 420 (427)
Q Consensus 396 ~~g~~e~v~~--~~~G~l~~-~~~~la~ 420 (427)
.|...|+.++ ++|+++|+ +.++..+
T Consensus 659 DGanvEi~e~vG~eN~fiFG~~~~ev~~ 686 (794)
T TIGR02093 659 DGANVEIREEVGAENIFIFGLTVEEVEA 686 (794)
T ss_pred cchhHHHHHHhCcccEEEcCCCHHHHHH
Confidence 9999998877 88999994 4455443
No 162
>PLN02208 glycosyltransferase family protein
Probab=94.23 E-value=8.1 Score=40.28 Aligned_cols=76 Identities=13% Similarity=0.243 Sum_probs=49.4
Q ss_pred cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccce-ecCCcEEEeC---
Q 014316 342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELV-KVDKNGLLFS--- 413 (427)
Q Consensus 342 ~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v-~~~~~G~l~~--- 413 (427)
++.+.+ |+++. ++|+...+..+. +++- -+.++||+++|+|+|+-..-+ ....+ +.-+.|+.++
T Consensus 312 g~~v~~-W~PQ~---~iL~H~~v~~Fv---tHcG--~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~ 382 (442)
T PLN02208 312 GVVWGG-WVQQP---LILDHPSIGCFV---NHCG--PGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREK 382 (442)
T ss_pred CcEeec-cCCHH---HHhcCCccCeEE---ccCC--chHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecccc
Confidence 565545 78884 467777775553 5441 138999999999999986322 23333 2345676662
Q ss_pred ----ChHHHHHHHHHhc
Q 014316 414 ----SSSELADQLLVNA 426 (427)
Q Consensus 414 ----~~~~la~~l~~~~ 426 (427)
+.++++++++++.
T Consensus 383 ~~~~~~~~l~~ai~~~m 399 (442)
T PLN02208 383 TGWFSKESLSNAIKSVM 399 (442)
T ss_pred CCcCcHHHHHHHHHHHh
Confidence 4578888887754
No 163
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=94.22 E-value=0.11 Score=57.20 Aligned_cols=143 Identities=15% Similarity=0.186 Sum_probs=98.8
Q ss_pred cCCCCCeEEEEEeecCCCCCHHH-HHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCC-CChHH
Q 014316 253 LKPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDKES 330 (427)
Q Consensus 253 ~~~~~~~~i~~~g~~~~~K~~~~-Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G-~~~~~ 330 (427)
+.++ .+.++++-|+...|.... ++..+..+.+- .+.+........|++.|+- |....
T Consensus 525 ldp~-slfdvq~kR~heYKRq~Lnil~ii~~y~~i--------------------~~~p~~~~~P~~~IFaGKAaP~y~~ 583 (798)
T PRK14985 525 INPQ-AIFDVQIKRLHEYKRQHLNLLHILALYKEI--------------------RENPQADRVPRVFLFGAKAAPGYYL 583 (798)
T ss_pred cCch-hcchhhHhhhhhhhhhhhHhhhhHHHHHHH--------------------HhCCCcCCCCeEEEEeecCCCCcHH
Confidence 3444 357889999999999888 77777666553 1111112223789999964 33332
Q ss_pred HHHH---HHHcC--------C-C--cEEEecCCCCcccHHHHHhcCcEEEeeccCCCC-CCCchHHHHHHcCCCcEEEec
Q 014316 331 YEEK---IRRLR--------L-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG-LDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 331 ~~~~---~~~l~--------l-~--~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~-e~~p~~~lEama~G~PVIas~ 395 (427)
.++. +..+. + + +|.|+.. .+..-...++.+||+..-- |..+ |..|..=+=+|..|.+.++|-
T Consensus 584 aK~iIklI~~va~~in~Dp~v~~~lkVVFlen-Y~VslAe~lipaaDvseqi--s~ag~EASGTsnMK~amNGaLtlgtl 660 (798)
T PRK14985 584 AKNIIFAINKVAEVINNDPLVGDKLKVVFLPD-YCVSAAELLIPAADISEQI--STAGKEASGTGNMKLALNGALTVGTL 660 (798)
T ss_pred HHHHHHHHHHHHHHhcCChhhCCceeEEEeCC-CChHHHHHHhhhhhhhhhC--CCCCccccCcchhHHHhcCceeeecc
Confidence 2322 22221 1 1 5899887 7788888999999999863 2333 888888888999999999999
Q ss_pred cCccccceec--CCcEEEeCC-hHHHH
Q 014316 396 YSCIEELVKV--DKNGLLFSS-SSELA 419 (427)
Q Consensus 396 ~~g~~e~v~~--~~~G~l~~~-~~~la 419 (427)
.|...|+.++ ++||++++. .+++.
T Consensus 661 DGanvEi~e~vG~eN~f~fG~~~~ev~ 687 (798)
T PRK14985 661 DGANVEIAEQVGEENIFIFGHTVEQVK 687 (798)
T ss_pred cchHHHHHHHhCcCcEEEeCCCHHHHH
Confidence 9999988875 889999954 45443
No 164
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=93.93 E-value=0.73 Score=50.33 Aligned_cols=139 Identities=15% Similarity=0.126 Sum_probs=86.0
Q ss_pred CeEEEEEeecCCCCCHHH-HHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCC-CChHHHHHHH
Q 014316 258 PALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDKESYEEKI 335 (427)
Q Consensus 258 ~~~i~~~g~~~~~K~~~~-Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G-~~~~~~~~~~ 335 (427)
.+..+++-|+...|.... ++..+..+.+-. ..+......+.+++.|+- |....-++.+
T Consensus 444 slfdv~~rR~heYKRq~LniL~ii~~y~rik--------------------~~p~~~~~Pv~~IFaGKAhP~d~~gK~iI 503 (713)
T PF00343_consen 444 SLFDVQARRFHEYKRQLLNILHIIDRYNRIK--------------------NNPNKKIRPVQFIFAGKAHPGDYMGKEII 503 (713)
T ss_dssp SEEEEEES-SCCCCTHHHHHHHHHHHHHHHH--------------------HSTTSCCS-EEEEEE----TT-HHHHHHH
T ss_pred hhhhhhhhhcccccccCcccccHHHHHHHHH--------------------hcccCCCCCeEEEEeccCCCCcHHHHHHH
Confidence 457899999999999877 444444444320 011111223889999974 3333333333
Q ss_pred HH---c--------CCC---cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcccc
Q 014316 336 RR---L--------RLK---RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEE 401 (427)
Q Consensus 336 ~~---l--------~l~---~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e 401 (427)
+. + .+. +|.|+.- .+..-...++.++|+-...++ ...|..|..=.=+|..|.+.++|-.|...|
T Consensus 504 k~I~~va~~in~Dp~v~~~lkVvFlen-YdvslA~~lipg~DVwln~p~-~p~EASGTSgMK~~~NGaL~lstlDG~niE 581 (713)
T PF00343_consen 504 KLINNVAEVINNDPEVGDRLKVVFLEN-YDVSLAEKLIPGVDVWLNIPT-RPKEASGTSGMKAAMNGALNLSTLDGWNIE 581 (713)
T ss_dssp HHHHHHHHHHCT-TTTCCGEEEEEETT--SHHHHHHHGGG-SEEEE----TTSSSS-SHHHHHHHTT-EEEEESSTCHHH
T ss_pred HHHHHHHHHHhcChhhccceeEEeecC-CcHHHHHHHhhhhhhhhhCCC-CCccccCCCcchhhcCCCeEEecccchhHH
Confidence 22 1 222 5899887 777788899999999997411 233999999999999999999999999999
Q ss_pred ceec--CCcEEEeCC-hHHH
Q 014316 402 LVKV--DKNGLLFSS-SSEL 418 (427)
Q Consensus 402 ~v~~--~~~G~l~~~-~~~l 418 (427)
+.+. ++|.++|+. .++.
T Consensus 582 i~e~vG~eN~fiFG~~~~ev 601 (713)
T PF00343_consen 582 IAEAVGEENIFIFGLTAEEV 601 (713)
T ss_dssp HHHHH-GGGSEEES-BHHHH
T ss_pred HHHhcCCCcEEEcCCCHHHH
Confidence 8754 568899943 4443
No 165
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=93.79 E-value=0.17 Score=47.76 Aligned_cols=103 Identities=17% Similarity=0.189 Sum_probs=60.4
Q ss_pred CCCCeEEEEEeecCCCCCH--HHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCC--hHH
Q 014316 255 PNRPALVVSSTSWTPDEDF--GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KES 330 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~K~~--~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~--~~~ 330 (427)
.+++.+++..|.-.+.|.. +...+.+..+.+. ...+++.|...+ .+.
T Consensus 103 ~~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~-----------------------------~~~vvl~g~~~~~~~~~ 153 (247)
T PF01075_consen 103 KDKPYIGINPGASWPSKRWPAEKWAELIERLKER-----------------------------GYRVVLLGGPEEQEKEI 153 (247)
T ss_dssp TTSSEEEEE---SSGGGS--HHHHHHHHHHHCCC-----------------------------T-EEEE--SSHHHHHHH
T ss_pred ccCCeEEEeecCCCccccCCHHHHHHHHHHHHhh-----------------------------CceEEEEccchHHHHHH
Confidence 4456677777765666654 3466666655432 277888887754 222
Q ss_pred HHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 331 YEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 331 ~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
.++..+...-..+.+.|. .+-.++..+++.||++|.+ ..+ .+==|.|.|+|+|+--
T Consensus 154 ~~~~~~~~~~~~~~~~~~-~~l~e~~ali~~a~~~I~~---Dtg-----~~HlA~a~~~p~v~lf 209 (247)
T PF01075_consen 154 ADQIAAGLQNPVINLAGK-TSLRELAALISRADLVIGN---DTG-----PMHLAAALGTPTVALF 209 (247)
T ss_dssp HHHHHTTHTTTTEEETTT-S-HHHHHHHHHTSSEEEEE---SSH-----HHHHHHHTT--EEEEE
T ss_pred HHHHHHhcccceEeecCC-CCHHHHHHHHhcCCEEEec---CCh-----HHHHHHHHhCCEEEEe
Confidence 223333222125888887 8899999999999999985 333 4566889999999874
No 166
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=92.91 E-value=1.5 Score=42.20 Aligned_cols=97 Identities=16% Similarity=0.198 Sum_probs=61.5
Q ss_pred EEEEEeecCCC-------CCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCC--hHH
Q 014316 260 LVVSSTSWTPD-------EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KES 330 (427)
Q Consensus 260 ~i~~~g~~~~~-------K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~--~~~ 330 (427)
.|++..+..++ .+...+++.+..+.+. .|++.++|-=...+ ...
T Consensus 119 ~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~---------------------------~p~~~lvvK~HP~~~~~~~ 171 (269)
T PF05159_consen 119 YVLVPLQVENDSQIRYHSPSQADFLDMLESFAKE---------------------------NPDAKLVVKPHPDERGGNK 171 (269)
T ss_pred EEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHH---------------------------CCCCEEEEEECchhhCCCC
Confidence 66777776665 2345556666665554 66777766443210 001
Q ss_pred HHHHHHHc-CCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 331 YEEKIRRL-RLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 331 ~~~~~~~l-~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
. ....++ +..++.+... .-++.+++..||.++.. ++ .+-+||+.+|+||++-.
T Consensus 172 ~-~~~~~~~~~~~~~~~~~---~~~~~~Ll~~s~~Vvti---nS-----tvGlEAll~gkpVi~~G 225 (269)
T PF05159_consen 172 Y-SYLEELPNLPNVVIIDD---DVNLYELLEQSDAVVTI---NS-----TVGLEALLHGKPVIVFG 225 (269)
T ss_pred h-hHhhhhhcCCCeEEECC---CCCHHHHHHhCCEEEEE---CC-----HHHHHHHHcCCceEEec
Confidence 1 222222 3456666554 67889999999999974 33 38899999999999965
No 167
>PLN02562 UDP-glycosyltransferase
Probab=92.39 E-value=16 Score=38.19 Aligned_cols=77 Identities=13% Similarity=0.110 Sum_probs=49.7
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC----ccccceec-CCcEEEe--C
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELVKV-DKNGLLF--S 413 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~----g~~e~v~~-~~~G~l~--~ 413 (427)
+|+.+.+ |+++. ++|+..++..+. +++ | -++++||+.+|+|+|+.... .....+.+ -+.|+-+ -
T Consensus 328 ~~~~v~~-w~PQ~---~iL~h~~v~~fv---tH~-G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~ 398 (448)
T PLN02562 328 KQGKVVS-WAPQL---EVLKHQAVGCYL---THC-G-WNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGF 398 (448)
T ss_pred cCEEEEe-cCCHH---HHhCCCccceEE---ecC-c-chhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCC
Confidence 4676665 78884 567777765443 443 1 23899999999999988633 23334433 3556666 3
Q ss_pred ChHHHHHHHHHhc
Q 014316 414 SSSELADQLLVNA 426 (427)
Q Consensus 414 ~~~~la~~l~~~~ 426 (427)
+.++++++++++.
T Consensus 399 ~~~~l~~~v~~~l 411 (448)
T PLN02562 399 GQKEVEEGLRKVM 411 (448)
T ss_pred CHHHHHHHHHHHh
Confidence 4688888887653
No 168
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=91.93 E-value=2.2 Score=38.42 Aligned_cols=65 Identities=18% Similarity=0.190 Sum_probs=37.4
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhc------CCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEc
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLR------RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCV 173 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~------~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~v 173 (427)
.+||+|+++.|..--. ..+++++. +.|+|+- -.+. +....+.-.+ .+++.||.+++-
T Consensus 91 ~rPdvii~nGpg~~vp---~~~~~~l~~~~~~~~~kiIyI-ES~a------Rv~~lSlTGk-------lly~~aD~f~VQ 153 (170)
T PF08660_consen 91 ERPDVIISNGPGTCVP---VCLAAKLLRLLGLRGSKIIYI-ESFA------RVKTLSLTGK-------LLYPFADRFIVQ 153 (170)
T ss_pred hCCCEEEEcCCceeeH---HHHHHHHHHHhhccCCcEEEE-Eeee------ecCCCchHHH-------HHHHhCCEEEEc
Confidence 7899999998654332 33444555 8887761 1110 0112222222 234469999998
Q ss_pred CHHHHHHH
Q 014316 174 TQAMQHEL 181 (427)
Q Consensus 174 S~~~~~~l 181 (427)
-+++++.+
T Consensus 154 W~~l~~~y 161 (170)
T PF08660_consen 154 WEELAEKY 161 (170)
T ss_pred CHHHHhHC
Confidence 88877553
No 169
>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=89.98 E-value=24 Score=35.87 Aligned_cols=47 Identities=23% Similarity=0.323 Sum_probs=39.1
Q ss_pred cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC
Q 014316 342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 342 ~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~ 397 (427)
.+..+.+ +++++...+|..||+-++ .+|. +.+=|.-+|+|.|=.-++
T Consensus 245 ~l~~lPF-~~Q~~yD~LLw~cD~NfV-----RGED---SfVRAqwAgkPFvWhIYp 291 (374)
T PF10093_consen 245 TLHVLPF-VPQDDYDRLLWACDFNFV-----RGED---SFVRAQWAGKPFVWHIYP 291 (374)
T ss_pred EEEECCC-CCHHHHHHHHHhCccceE-----ecch---HHHHHHHhCCCceEecCc
Confidence 4899998 999999999999999984 4454 388999999999865444
No 170
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=88.31 E-value=21 Score=33.06 Aligned_cols=48 Identities=27% Similarity=0.356 Sum_probs=37.7
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEecc
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 396 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~ 396 (427)
.++.......+.+++..+++++|++|.- ..+ ..+=|+++|+|+|+-+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~Is~---RlH-----~~I~a~~~g~P~i~i~y 284 (286)
T PF04230_consen 237 FNVIIIDYSLSPDELLELISQADLVISM---RLH-----GAILALSLGVPVIAISY 284 (286)
T ss_pred cceeEecCCCCHHHHHHHHhcCCEEEec---CCH-----HHHHHHHcCCCEEEEec
Confidence 3455555558899999999999999963 334 57889999999998654
No 171
>PLN03004 UDP-glycosyltransferase
Probab=87.93 E-value=4.1 Score=42.60 Aligned_cols=77 Identities=14% Similarity=0.189 Sum_probs=52.0
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC----cccccee-cCCcEEEeC--
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELVK-VDKNGLLFS-- 413 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~----g~~e~v~-~~~~G~l~~-- 413 (427)
.++...+ |+++. ++|+.+++..+. +++. -+.++||+++|+|+|+.... .....+. +-+.|+.++
T Consensus 334 ~g~~v~~-W~PQ~---~iL~H~~v~~Fv---TH~G--~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~ 404 (451)
T PLN03004 334 KGMVVKS-WAPQV---PVLNHKAVGGFV---THCG--WNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNES 404 (451)
T ss_pred CcEEEEe-eCCHH---HHhCCCccceEe---ccCc--chHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCC
Confidence 3577656 78885 478889985543 4431 13899999999999998632 2333443 346776662
Q ss_pred -----ChHHHHHHHHHhc
Q 014316 414 -----SSSELADQLLVNA 426 (427)
Q Consensus 414 -----~~~~la~~l~~~~ 426 (427)
+.+++++++++++
T Consensus 405 ~~~~~~~e~l~~av~~vm 422 (451)
T PLN03004 405 ETGFVSSTEVEKRVQEII 422 (451)
T ss_pred cCCccCHHHHHHHHHHHh
Confidence 4588999888764
No 172
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=87.73 E-value=11 Score=33.85 Aligned_cols=79 Identities=16% Similarity=0.185 Sum_probs=45.5
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
..+|++++.+--....+ ..+...+.++|.++.+|.-.+ ....+-+..+-+. +.+..-+..-.||.|++.|+.-++
T Consensus 58 ~~~dll~aTsmldLa~l--~gL~p~l~~~p~ilYFHENQl-~YP~~~~~~rd~~--~~~~ni~saLaAD~v~FNS~~nr~ 132 (168)
T PF12038_consen 58 HSYDLLFATSMLDLATL--RGLRPDLANVPKILYFHENQL-AYPVSPGQERDFQ--YGMNNIYSALAADRVVFNSAFNRD 132 (168)
T ss_pred cCCCEEEeeccccHHHH--HhhccCCCCCCEEEEEecCcc-cCCCCCCcccccc--HHHHHHHHHHhceeeeecchhhHH
Confidence 67899999983222221 233345678999999997532 1111112211111 122222333369999999999888
Q ss_pred HHHH
Q 014316 180 ELAQ 183 (427)
Q Consensus 180 ~l~~ 183 (427)
.+.+
T Consensus 133 sFL~ 136 (168)
T PF12038_consen 133 SFLD 136 (168)
T ss_pred HHHH
Confidence 7765
No 173
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=87.10 E-value=38 Score=34.59 Aligned_cols=70 Identities=19% Similarity=0.193 Sum_probs=45.3
Q ss_pred EEEeCCCChHHHHHHHHHcC-CCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc
Q 014316 320 IITGKGPDKESYEEKIRRLR-LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC 398 (427)
Q Consensus 320 ~i~G~G~~~~~~~~~~~~l~-l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g 398 (427)
+-.+.-++..-.++.+.... .+++.+.-- -..+++...++++|+.|-- -.+ .++=||+.|+|+|+-.+..
T Consensus 244 ~~~~~s~d~~va~~ia~~~~~~~~i~~~~d-~~~~~~~~~l~~~dl~Vg~---R~H-----saI~al~~g~p~i~i~Y~~ 314 (385)
T COG2327 244 IDYGASDDLAVADAIAQLVLDSAEILVSSD-EYAEELGGILAACDLIVGM---RLH-----SAIMALAFGVPAIAIAYDP 314 (385)
T ss_pred eeccccchhHHHHHHHhhcCCccceEeecc-hHHHHHHHHhccCceEEee---hhH-----HHHHHHhcCCCeEEEeecH
Confidence 33334344455555555543 357777654 1136778899999999852 222 5788999999999987543
No 174
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=86.45 E-value=0.98 Score=38.39 Aligned_cols=50 Identities=16% Similarity=0.153 Sum_probs=31.0
Q ss_pred EEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEee
Q 014316 9 VVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62 (427)
Q Consensus 9 v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~ 62 (427)
++..+..|.-.=+.-.+.+|.++ ||+|.+.+... ..+..+..|++++.++
T Consensus 3 i~~~Gt~Ghv~P~lala~~L~~r-Gh~V~~~~~~~---~~~~v~~~Gl~~~~~~ 52 (139)
T PF03033_consen 3 IATGGTRGHVYPFLALARALRRR-GHEVRLATPPD---FRERVEAAGLEFVPIP 52 (139)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHT-T-EEEEEETGG---GHHHHHHTT-EEEESS
T ss_pred EEEcCChhHHHHHHHHHHHHhcc-CCeEEEeeccc---ceecccccCceEEEec
Confidence 44444333333355567788886 99999888654 2334466799999988
No 175
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=86.04 E-value=2.6 Score=40.91 Aligned_cols=61 Identities=16% Similarity=0.323 Sum_probs=43.8
Q ss_pred EEEeCC-CChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEE
Q 014316 320 IITGKG-PDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA 393 (427)
Q Consensus 320 ~i~G~G-~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIa 393 (427)
+++|.+ |....+.+.++.. +++.+.-. .+++..++++||+.+.. =|++++|+...|+|.++
T Consensus 190 iV~gs~~p~l~~l~k~~~~~--~~i~~~~~---~~dma~LMke~d~aI~A--------aGstlyEa~~lgvP~l~ 251 (318)
T COG3980 190 IVVGSSNPTLKNLRKRAEKY--PNINLYID---TNDMAELMKEADLAISA--------AGSTLYEALLLGVPSLV 251 (318)
T ss_pred EEecCCCcchhHHHHHHhhC--CCeeeEec---chhHHHHHHhcchheec--------cchHHHHHHHhcCCceE
Confidence 344533 4445555555553 47877665 99999999999999962 35689999999999433
No 176
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=85.91 E-value=5.2 Score=36.52 Aligned_cols=82 Identities=12% Similarity=0.074 Sum_probs=37.9
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEE-ecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVD-WHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~-~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
.+||+++.-.....+.++ ..++.+|+|+++- -+-. .+.-...+.+.++.+.+.+..|.|.+.|+.+.
T Consensus 94 ~~P~~~i~~EtElWPnll---~~a~~~~ip~~LvNarls---------~~s~~~~~~~~~~~r~~l~~f~~i~aqs~~da 161 (186)
T PF04413_consen 94 WRPDLLIWVETELWPNLL---REAKRRGIPVVLVNARLS---------ERSFRRYRRFPFLFRPLLSRFDRILAQSEADA 161 (186)
T ss_dssp H--SEEEEES----HHHH---HH-----S-EEEEEE-----------------------HHHHHHGGG-SEEEESSHHHH
T ss_pred hCCCEEEEEccccCHHHH---HHHhhcCCCEEEEeeeec---------cccchhhhhhHHHHHHHHHhCCEEEECCHHHH
Confidence 689999988744444433 4456679997652 1111 01111122235567777888999999999999
Q ss_pred HHHHHhhCCe---EEEecC
Q 014316 179 HELAQNWGIK---ATVLYD 194 (427)
Q Consensus 179 ~~l~~~~~~~---~~vi~n 194 (427)
+.+.+. |.+ +.+.-|
T Consensus 162 ~r~~~l-G~~~~~v~v~Gn 179 (186)
T PF04413_consen 162 ERFRKL-GAPPERVHVTGN 179 (186)
T ss_dssp HHHHTT-T-S--SEEE---
T ss_pred HHHHHc-CCCcceEEEeCc
Confidence 999775 544 555544
No 177
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=85.49 E-value=5.8 Score=41.62 Aligned_cols=76 Identities=17% Similarity=0.284 Sum_probs=45.8
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEecc-C---ccccceecCCcEEEeC---
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY-S---CIEELVKVDKNGLLFS--- 413 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~-~---g~~e~v~~~~~G~l~~--- 413 (427)
+|+.... |+|+. ++|+...+-++. +++ | -+.+.||+.+|+|+|+-.. | .....+++...|...+
T Consensus 323 ~n~~~~~-W~PQ~---~lL~hp~v~~fi---tHg-G-~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~ 393 (500)
T PF00201_consen 323 KNVLIVK-WLPQN---DLLAHPRVKLFI---THG-G-LNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKND 393 (500)
T ss_dssp TTEEEES-S--HH---HHHTSTTEEEEE---ES----HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC
T ss_pred ceEEEec-cccch---hhhhcccceeee---ecc-c-cchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecC
Confidence 3776655 89984 557666554442 444 2 2489999999999999873 3 2444555666777663
Q ss_pred -ChHHHHHHHHHh
Q 014316 414 -SSSELADQLLVN 425 (427)
Q Consensus 414 -~~~~la~~l~~~ 425 (427)
+.+++.++|.++
T Consensus 394 ~~~~~l~~ai~~v 406 (500)
T PF00201_consen 394 LTEEELRAAIREV 406 (500)
T ss_dssp -SHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHH
Confidence 358888888775
No 178
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=83.15 E-value=7.3 Score=34.66 Aligned_cols=69 Identities=13% Similarity=0.187 Sum_probs=42.7
Q ss_pred hCCCcEEEEcCCCChhHHH-HHHHHHhh-c-CCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCH
Q 014316 99 IASPDVFLVQNPPSVPTLV-AVKWASSL-R-RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQ 175 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~-~~~~~~~~-~-~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~ 175 (427)
..+||+|++..|.. +.+ +..+..+. . ++|++.-+-|+.. . .. .|+...+|..++.|+
T Consensus 87 ~~~PD~IIsThp~~--~~~~l~~lk~~~~~~~~p~~tvvTD~~~-~-----H~------------~W~~~~~D~y~Vase 146 (169)
T PF06925_consen 87 EFQPDLIISTHPFP--AQVPLSRLKRRGRLPNIPVVTVVTDFDT-V-----HP------------FWIHPGVDRYFVASE 146 (169)
T ss_pred hcCCCEEEECCcch--hhhHHHHHHHhhcccCCcEEEEEcCCCC-C-----Cc------------CeecCCCCEEEECCH
Confidence 48999999988532 223 33333332 3 5776544445410 0 00 123467999999999
Q ss_pred HHHHHHHHhhCCe
Q 014316 176 AMQHELAQNWGIK 188 (427)
Q Consensus 176 ~~~~~l~~~~~~~ 188 (427)
.+++.+.+. |++
T Consensus 147 ~~~~~l~~~-Gi~ 158 (169)
T PF06925_consen 147 EVKEELIER-GIP 158 (169)
T ss_pred HHHHHHHHc-CCC
Confidence 999999874 665
No 179
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=82.87 E-value=65 Score=33.69 Aligned_cols=77 Identities=14% Similarity=0.227 Sum_probs=49.3
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceecC-CcEEEe---
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVD-KNGLLF--- 412 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~~-~~G~l~--- 412 (427)
+|....+ |+++.+ +|+..++..+. +++ |. +.++||+++|+|+|+....+ ....+.+. +.|+-+
T Consensus 324 ~~g~v~~-w~PQ~~---iL~h~~v~~fv---tH~-G~-nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~ 394 (451)
T PLN02410 324 GRGYIVK-WAPQKE---VLSHPAVGGFW---SHC-GW-NSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGD 394 (451)
T ss_pred CCeEEEc-cCCHHH---HhCCCccCeee---ecC-ch-hHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCc
Confidence 3555555 899865 56665564332 333 12 38999999999999986332 33334333 677766
Q ss_pred CChHHHHHHHHHhc
Q 014316 413 SSSSELADQLLVNA 426 (427)
Q Consensus 413 ~~~~~la~~l~~~~ 426 (427)
-+.++++++++++.
T Consensus 395 ~~~~~v~~av~~lm 408 (451)
T PLN02410 395 LDRGAVERAVKRLM 408 (451)
T ss_pred ccHHHHHHHHHHHH
Confidence 24588998887763
No 180
>PLN02210 UDP-glucosyl transferase
Probab=82.56 E-value=19 Score=37.71 Aligned_cols=76 Identities=13% Similarity=0.143 Sum_probs=48.6
Q ss_pred cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceec-CCcEEEeC---
Q 014316 342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKV-DKNGLLFS--- 413 (427)
Q Consensus 342 ~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~-~~~G~l~~--- 413 (427)
+....+ |+++. ++|+.+++..+. +++ |. ++++|++++|+|+|+-...+ ....+.+ -+.|+.+.
T Consensus 325 ~g~v~~-w~PQ~---~iL~h~~vg~Fi---tH~-G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~ 395 (456)
T PLN02210 325 QGVVLE-WSPQE---KILSHMAISCFV---THC-GW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDA 395 (456)
T ss_pred CeEEEe-cCCHH---HHhcCcCcCeEE---eeC-Cc-ccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccc
Confidence 433444 78885 578888755443 333 11 27999999999999987432 3334433 46776662
Q ss_pred -----ChHHHHHHHHHhc
Q 014316 414 -----SSSELADQLLVNA 426 (427)
Q Consensus 414 -----~~~~la~~l~~~~ 426 (427)
+.+++++++++++
T Consensus 396 ~~~~~~~~~l~~av~~~m 413 (456)
T PLN02210 396 VDGELKVEEVERCIEAVT 413 (456)
T ss_pred cCCcCCHHHHHHHHHHHh
Confidence 3578888888754
No 181
>PLN02670 transferase, transferring glycosyl groups
Probab=82.10 E-value=12 Score=39.39 Aligned_cols=75 Identities=19% Similarity=0.208 Sum_probs=49.3
Q ss_pred EEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceecCCcEEEeC-----
Q 014316 343 VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKNGLLFS----- 413 (427)
Q Consensus 343 V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~~~~G~l~~----- 413 (427)
+.+.+ |+++. ++|+...+..+. +++- -+.++||+++|+|+|+....+ ....+.+-+.|+.+.
T Consensus 341 ~vv~~-W~PQ~---~IL~H~~v~~Fv---tHcG--wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~ 411 (472)
T PLN02670 341 MIHVG-WVPQV---KILSHESVGGFL---THCG--WNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERD 411 (472)
T ss_pred eEEeC-cCCHH---HHhcCcccceee---ecCC--cchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccC
Confidence 55545 78884 467777775443 4431 137999999999999986332 333444566777662
Q ss_pred ---ChHHHHHHHHHhc
Q 014316 414 ---SSSELADQLLVNA 426 (427)
Q Consensus 414 ---~~~~la~~l~~~~ 426 (427)
+.+++++++++++
T Consensus 412 ~~~~~e~i~~av~~vm 427 (472)
T PLN02670 412 GSFTSDSVAESVRLAM 427 (472)
T ss_pred CcCcHHHHHHHHHHHh
Confidence 3578888888764
No 182
>PLN02167 UDP-glycosyltransferase family protein
Probab=80.22 E-value=20 Score=37.70 Aligned_cols=76 Identities=16% Similarity=0.175 Sum_probs=45.5
Q ss_pred cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cc-cceecCCcEEEeC---
Q 014316 342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IE-ELVKVDKNGLLFS--- 413 (427)
Q Consensus 342 ~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~-e~v~~~~~G~l~~--- 413 (427)
+..+.+ |+++. ++|+...+..+. +++ |. +.++||+++|+|+|+-...+ .. .+++.-+.|+.+.
T Consensus 341 rg~v~~-w~PQ~---~iL~h~~vg~fv---tH~-G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~ 411 (475)
T PLN02167 341 RGLVCG-WAPQV---EILAHKAIGGFV---SHC-GW-NSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDY 411 (475)
T ss_pred Ceeeec-cCCHH---HHhcCcccCeEE---eeC-Cc-ccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeeccc
Confidence 344554 78874 466665543332 332 11 27999999999999986332 22 2244445566551
Q ss_pred --------ChHHHHHHHHHhc
Q 014316 414 --------SSSELADQLLVNA 426 (427)
Q Consensus 414 --------~~~~la~~l~~~~ 426 (427)
+.++++++++++.
T Consensus 412 ~~~~~~~~~~~~l~~av~~~m 432 (475)
T PLN02167 412 VSAYGEIVKADEIAGAVRSLM 432 (475)
T ss_pred ccccCCcccHHHHHHHHHHHh
Confidence 3578888887753
No 183
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=79.90 E-value=2.6 Score=40.84 Aligned_cols=69 Identities=16% Similarity=0.264 Sum_probs=46.0
Q ss_pred cccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCC-cEEEec--cCccccceecCCcEEEe--CChHHHHHHHH
Q 014316 352 AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL-PVCAVS--YSCIEELVKVDKNGLLF--SSSSELADQLL 423 (427)
Q Consensus 352 ~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~-PVIas~--~~g~~e~v~~~~~G~l~--~~~~~la~~l~ 423 (427)
..+..+.|+.|..+++|... .....-++|||++|+ |||.++ .-...+++.=..-.+.+ .+..+|-+.|+
T Consensus 227 ~~~~~~~l~~S~FCL~p~G~---~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL~ 300 (302)
T PF03016_consen 227 PSEYMELLRNSKFCLCPRGD---GPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEILR 300 (302)
T ss_pred chHHHHhcccCeEEEECCCC---CcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHHHh
Confidence 45688999999999996332 224568999999998 999876 34556666323334444 33455555554
No 184
>PLN00164 glucosyltransferase; Provisional
Probab=79.28 E-value=24 Score=37.20 Aligned_cols=75 Identities=13% Similarity=0.156 Sum_probs=47.7
Q ss_pred EEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC----ccccce-ecCCcEEEeC----
Q 014316 343 VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELV-KVDKNGLLFS---- 413 (427)
Q Consensus 343 V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~----g~~e~v-~~~~~G~l~~---- 413 (427)
+.+.+ |+++ .++|...++..+. +++ |. ++++||+++|+|+|+-..- .....+ +.-+.|+-+.
T Consensus 341 ~~v~~-w~PQ---~~iL~h~~vg~fv---tH~-Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~ 411 (480)
T PLN00164 341 LVWPT-WAPQ---KEILAHAAVGGFV---THC-GW-NSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRK 411 (480)
T ss_pred eEEee-cCCH---HHHhcCcccCeEE---eec-cc-chHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccc
Confidence 44444 6787 5577888865443 333 12 3799999999999998632 223233 3346676651
Q ss_pred -----ChHHHHHHHHHhc
Q 014316 414 -----SSSELADQLLVNA 426 (427)
Q Consensus 414 -----~~~~la~~l~~~~ 426 (427)
+.+++++++++++
T Consensus 412 ~~~~~~~e~l~~av~~vm 429 (480)
T PLN00164 412 RDNFVEAAELERAVRSLM 429 (480)
T ss_pred cCCcCcHHHHHHHHHHHh
Confidence 3578888887764
No 185
>PLN02764 glycosyltransferase family protein
Probab=78.70 E-value=23 Score=37.08 Aligned_cols=75 Identities=15% Similarity=0.093 Sum_probs=46.3
Q ss_pred EEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccce-ecCCcEEEe-----
Q 014316 343 VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELV-KVDKNGLLF----- 412 (427)
Q Consensus 343 V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v-~~~~~G~l~----- 412 (427)
+...+ |+++.+ +|+...+..+. +++. -++++||+.+|+|+|+-...+ ....+ ++-+.|+-+
T Consensus 319 ~v~~~-W~PQ~~---vL~h~~v~~Fv---tH~G--~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~ 389 (453)
T PLN02764 319 VVWGG-WVQQPL---ILSHPSVGCFV---SHCG--FGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREET 389 (453)
T ss_pred cEEeC-CCCHHH---HhcCcccCeEE---ecCC--chHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccC
Confidence 44444 788855 56665554332 4331 138999999999999987433 23334 233556554
Q ss_pred --CChHHHHHHHHHhc
Q 014316 413 --SSSSELADQLLVNA 426 (427)
Q Consensus 413 --~~~~~la~~l~~~~ 426 (427)
-+.+++++++++++
T Consensus 390 ~~~~~e~i~~av~~vm 405 (453)
T PLN02764 390 GWFSKESLRDAINSVM 405 (453)
T ss_pred CccCHHHHHHHHHHHh
Confidence 14578888887764
No 186
>PLN00414 glycosyltransferase family protein
Probab=77.88 E-value=31 Score=36.06 Aligned_cols=85 Identities=13% Similarity=0.225 Sum_probs=50.9
Q ss_pred HHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccce-e
Q 014316 330 SYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELV-K 404 (427)
Q Consensus 330 ~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v-~ 404 (427)
.+++.++.- ...+.+ |+++. ++|+...+..+. +++. -++++||+++|+|+|+....+ ....+ +
T Consensus 304 ~f~~r~~~~---g~vv~~-w~PQ~---~vL~h~~v~~fv---tH~G--~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~ 371 (446)
T PLN00414 304 GFEERVKGR---GIVWEG-WVEQP---LILSHPSVGCFV---NHCG--FGSMWESLVSDCQIVFIPQLADQVLITRLLTE 371 (446)
T ss_pred hHHHHhcCC---CeEEec-cCCHH---HHhcCCccceEE---ecCc--hhHHHHHHHcCCCEEecCcccchHHHHHHHHH
Confidence 444444332 244434 78884 467666553332 3331 138999999999999986332 33344 3
Q ss_pred cCCcEEEeC-------ChHHHHHHHHHhc
Q 014316 405 VDKNGLLFS-------SSSELADQLLVNA 426 (427)
Q Consensus 405 ~~~~G~l~~-------~~~~la~~l~~~~ 426 (427)
+-+.|+.+. +.++++++++++.
T Consensus 372 ~~g~g~~~~~~~~~~~~~~~i~~~v~~~m 400 (446)
T PLN00414 372 ELEVSVKVQREDSGWFSKESLRDTVKSVM 400 (446)
T ss_pred HhCeEEEeccccCCccCHHHHHHHHHHHh
Confidence 456676662 4578888887754
No 187
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=76.65 E-value=21 Score=37.67 Aligned_cols=75 Identities=20% Similarity=0.285 Sum_probs=44.9
Q ss_pred cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----ccccee-cCCcEEEe----
Q 014316 342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVK-VDKNGLLF---- 412 (427)
Q Consensus 342 ~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~-~~~~G~l~---- 412 (427)
++...+ |+++ .++|....+.++. +++ |. +.++||+++|+|+|+-...+ ....+. .-+.|+-+
T Consensus 344 g~~v~~-w~PQ---~~vL~h~~v~~fv---tH~-G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~ 414 (477)
T PLN02863 344 GLVIRG-WAPQ---VAILSHRAVGAFL---THC-GW-NSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGA 414 (477)
T ss_pred CEEecC-CCCH---HHHhcCCCcCeEE---ecC-Cc-hHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCC
Confidence 566656 6887 4567664444332 333 11 37999999999999986322 233332 23566655
Q ss_pred ---CChHHHHHHHHHh
Q 014316 413 ---SSSSELADQLLVN 425 (427)
Q Consensus 413 ---~~~~~la~~l~~~ 425 (427)
-+.+++++++.++
T Consensus 415 ~~~~~~~~v~~~v~~~ 430 (477)
T PLN02863 415 DTVPDSDELARVFMES 430 (477)
T ss_pred CCCcCHHHHHHHHHHH
Confidence 1347777777654
No 188
>PLN02207 UDP-glycosyltransferase
Probab=73.66 E-value=19 Score=37.83 Aligned_cols=77 Identities=17% Similarity=0.204 Sum_probs=46.4
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccc-eecCCcEEEe---
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEEL-VKVDKNGLLF--- 412 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~-v~~~~~G~l~--- 412 (427)
+++.+.+ |+++.+ +|+...+..+. +++ |. +.++||+.+|+|+|+-...+ .... ++.-+.|+-+
T Consensus 332 ~~g~i~~-W~PQ~~---IL~H~~vg~Fv---TH~-Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~ 402 (468)
T PLN02207 332 GRGMICG-WSPQVE---ILAHKAVGGFV---SHC-GW-NSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLD 402 (468)
T ss_pred CCeEEEE-eCCHHH---Hhcccccceee---ecC-cc-ccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecc
Confidence 3555554 888855 55555554332 433 11 27899999999999987432 2232 2234556522
Q ss_pred --------CChHHHHHHHHHhc
Q 014316 413 --------SSSSELADQLLVNA 426 (427)
Q Consensus 413 --------~~~~~la~~l~~~~ 426 (427)
-+.+++++++++++
T Consensus 403 ~~~~~~~~v~~e~i~~av~~vm 424 (468)
T PLN02207 403 YRVHSDEIVNANEIETAIRCVM 424 (468)
T ss_pred cccccCCcccHHHHHHHHHHHH
Confidence 14578888887764
No 189
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=73.47 E-value=40 Score=31.68 Aligned_cols=130 Identities=12% Similarity=0.030 Sum_probs=73.9
Q ss_pred eEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHH
Q 014316 6 RACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPL 85 (427)
Q Consensus 6 ~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (427)
+++|+-.|.+| ...|..|+++ ||+|.++-...+.......+....+++... .. ....+.. +
T Consensus 2 ~iiIiG~G~vG-----~~va~~L~~~-g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd--~t-------~~~~L~~----a 62 (225)
T COG0569 2 KIIIIGAGRVG-----RSVARELSEE-GHNVVLIDRDEERVEEFLADELDTHVVIGD--AT-------DEDVLEE----A 62 (225)
T ss_pred EEEEECCcHHH-----HHHHHHHHhC-CCceEEEEcCHHHHHHHhhhhcceEEEEec--CC-------CHHHHHh----c
Confidence 34554444332 2457888996 999999975543311112222355555444 11 1111111 1
Q ss_pred HHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEE-EEecccchhhhhhhcCCCchHHHHHHHHHHHHh
Q 014316 86 IQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFI-VDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYG 164 (427)
Q Consensus 86 ~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i-~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 164 (427)
-..+.|++++-+........++.++.+..|+|-+ ...++..+ .+.+ +..
T Consensus 63 ------------gi~~aD~vva~t~~d~~N~i~~~la~~~~gv~~viar~~~~~~-------------~~~~----~~~- 112 (225)
T COG0569 63 ------------GIDDADAVVAATGNDEVNSVLALLALKEFGVPRVIARARNPEH-------------EKVL----EKL- 112 (225)
T ss_pred ------------CCCcCCEEEEeeCCCHHHHHHHHHHHHhcCCCcEEEEecCHHH-------------HHHH----HHc-
Confidence 1268999888876666666767777777788854 45555522 0111 111
Q ss_pred ccCCEEEEcCHHHHHHHHHhh
Q 014316 165 KMANGCLCVTQAMQHELAQNW 185 (427)
Q Consensus 165 ~~ad~vi~vS~~~~~~l~~~~ 185 (427)
-+|.++.....+.+++.+..
T Consensus 113 -g~~~ii~Pe~~~~~~l~~~i 132 (225)
T COG0569 113 -GADVIISPEKLAAKRLARLI 132 (225)
T ss_pred -CCcEEECHHHHHHHHHHHHh
Confidence 27889888888888887654
No 190
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=73.34 E-value=22 Score=37.25 Aligned_cols=76 Identities=17% Similarity=0.152 Sum_probs=47.1
Q ss_pred cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceecC-CcEEEe----
Q 014316 342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVD-KNGLLF---- 412 (427)
Q Consensus 342 ~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~~-~~G~l~---- 412 (427)
+..+.+ |+++ .++|+..++..+. +++.- +.++||+.+|+|+|+-...+ ....+.+. +.|+-+
T Consensus 328 ~g~v~~-W~PQ---~~iL~h~~vg~fv---tH~G~--nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~ 398 (455)
T PLN02152 328 VGMIVS-WCSQ---IEVLRHRAVGCFV---THCGW--SSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENS 398 (455)
T ss_pred CeEEEe-eCCH---HHHhCCcccceEE---eeCCc--ccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCc
Confidence 555554 8887 4578888876553 44311 27999999999999986322 22233221 234443
Q ss_pred ---CChHHHHHHHHHhc
Q 014316 413 ---SSSSELADQLLVNA 426 (427)
Q Consensus 413 ---~~~~~la~~l~~~~ 426 (427)
-+.++++++++++.
T Consensus 399 ~~~~~~e~l~~av~~vm 415 (455)
T PLN02152 399 EGLVERGEIRRCLEAVM 415 (455)
T ss_pred CCcCcHHHHHHHHHHHH
Confidence 14578888887754
No 191
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=73.25 E-value=93 Score=30.15 Aligned_cols=81 Identities=19% Similarity=0.130 Sum_probs=40.8
Q ss_pred HHHHHHHHHcCCCcEEEecCCCCcccHHHHHh----cCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcccccee
Q 014316 329 ESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG----SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVK 404 (427)
Q Consensus 329 ~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~----~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~ 404 (427)
+.+++.++++|++-+.+ .. -+.+++...+. ..|+++++........+...+..+..+++||+++. ...++
T Consensus 150 ~~~~~~a~~~g~~l~~~-~v-~~~~~~~~~~~~l~~~~da~~~~~~~~~~~~~~~i~~~~~~~~iPv~~~~----~~~v~ 223 (294)
T PF04392_consen 150 EQLRKAAKKLGIELVEI-PV-PSSEDLEQALEALAEKVDALYLLPDNLVDSNFEAILQLANEAKIPVFGSS----DFYVK 223 (294)
T ss_dssp HHHHHHHHHTT-EEEEE-EE-SSGGGHHHHHHHHCTT-SEEEE-S-HHHHHTHHHHHHHCCCTT--EEESS----HHHHC
T ss_pred HHHHHHHHHcCCEEEEE-ec-CcHhHHHHHHHHhhccCCEEEEECCcchHhHHHHHHHHHHhcCCCEEECC----HHHhc
Confidence 35666677777752222 21 24556555444 66888775322222444455667888999999976 33455
Q ss_pred cCCcEEEeCCh
Q 014316 405 VDKNGLLFSSS 415 (427)
Q Consensus 405 ~~~~G~l~~~~ 415 (427)
+|.-|-+.-|.
T Consensus 224 ~Gal~~~~~~~ 234 (294)
T PF04392_consen 224 AGALGGYSVDY 234 (294)
T ss_dssp TT-SEEEE--H
T ss_pred CCcEEEEccCH
Confidence 56555444444
No 192
>PLN02554 UDP-glycosyltransferase family protein
Probab=70.46 E-value=32 Score=36.28 Aligned_cols=77 Identities=12% Similarity=0.134 Sum_probs=46.0
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cc-cceecCCcEEEeC--
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IE-ELVKVDKNGLLFS-- 413 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~-e~v~~~~~G~l~~-- 413 (427)
+++.+.+ |+++. ++|+...+..+. +++ | -+.++||+.+|+|+|+....+ .. .+++.-+.|+.++
T Consensus 342 ~~g~v~~-W~PQ~---~iL~H~~v~~Fv---tH~-G-~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~ 412 (481)
T PLN02554 342 DIGKVIG-WAPQV---AVLAKPAIGGFV---THC-G-WNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKY 412 (481)
T ss_pred cCceEEe-eCCHH---HHhCCcccCccc---ccC-c-cchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeecc
Confidence 3565554 88874 466444443322 443 1 237999999999999986332 22 2344445565541
Q ss_pred -------------ChHHHHHHHHHhc
Q 014316 414 -------------SSSELADQLLVNA 426 (427)
Q Consensus 414 -------------~~~~la~~l~~~~ 426 (427)
+.++++++++++.
T Consensus 413 ~~~~~~~~~~~~~~~e~l~~av~~vm 438 (481)
T PLN02554 413 WRGDLLAGEMETVTAEEIERGIRCLM 438 (481)
T ss_pred ccccccccccCeEcHHHHHHHHHHHh
Confidence 3578888887653
No 193
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=67.41 E-value=36 Score=28.74 Aligned_cols=77 Identities=18% Similarity=0.234 Sum_probs=55.0
Q ss_pred hHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcccccee--c
Q 014316 328 KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVK--V 405 (427)
Q Consensus 328 ~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~--~ 405 (427)
.++..+.+++ ++ +|.+... .+.+++.+.++.+|+++. .....+.-.+++.+ -++-.|++...|...+-- =
T Consensus 8 ~~~~~~~l~~-~~-~v~~~~~-~~~~~~~~~l~~~d~ii~----~~~~~~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~a 79 (133)
T PF00389_consen 8 PDEEIERLEE-GF-EVEFCDS-PSEEELAERLKDADAIIV----GSGTPLTAEVLEAA-PNLKLISTAGAGVDNIDLEAA 79 (133)
T ss_dssp SHHHHHHHHH-TS-EEEEESS-SSHHHHHHHHTTESEEEE----STTSTBSHHHHHHH-TT-SEEEESSSSCTTB-HHHH
T ss_pred CHHHHHHHHC-Cc-eEEEeCC-CCHHHHHHHhCCCeEEEE----cCCCCcCHHHHhcc-ceeEEEEEcccccCcccHHHH
Confidence 3445556666 66 8889887 889999999999999997 33335778999988 899999998777654311 1
Q ss_pred CCcEEEe
Q 014316 406 DKNGLLF 412 (427)
Q Consensus 406 ~~~G~l~ 412 (427)
.+.|+.+
T Consensus 80 ~~~gI~V 86 (133)
T PF00389_consen 80 KERGIPV 86 (133)
T ss_dssp HHTTSEE
T ss_pred hhCeEEE
Confidence 3356666
No 194
>PLN02534 UDP-glycosyltransferase
Probab=67.05 E-value=1.8e+02 Score=30.89 Aligned_cols=46 Identities=15% Similarity=0.277 Sum_probs=32.6
Q ss_pred cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEecc
Q 014316 342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 396 (427)
Q Consensus 342 ~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~ 396 (427)
++.+.+ |+++ .+++...++..+. +++ =.+.++||.++|+|+|+-..
T Consensus 345 g~~v~~-w~pq---~~iL~h~~v~~fv---tH~--G~ns~~ea~~~GvP~v~~P~ 390 (491)
T PLN02534 345 GLLIKG-WAPQ---VLILSHPAIGGFL---THC--GWNSTIEGICSGVPMITWPL 390 (491)
T ss_pred CeeccC-CCCH---HHHhcCCccceEE---ecC--ccHHHHHHHHcCCCEEeccc
Confidence 566655 7888 4577777775443 433 22489999999999999864
No 195
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=66.19 E-value=39 Score=35.67 Aligned_cols=76 Identities=13% Similarity=0.124 Sum_probs=48.9
Q ss_pred cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccce-ecCCcEEEeC---
Q 014316 342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELV-KVDKNGLLFS--- 413 (427)
Q Consensus 342 ~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v-~~~~~G~l~~--- 413 (427)
++.+.+ |+++. ++++...+..+. +++ |. +.++||+.+|+|+|+....+ ....+ +.-+.|+-++
T Consensus 339 g~vv~~-W~PQ~---~iL~h~~vg~Fi---tH~-G~-nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~ 409 (481)
T PLN02992 339 GFVVPS-WAPQA---EILAHQAVGGFL---THC-GW-SSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPK 409 (481)
T ss_pred CEEEee-cCCHH---HHhCCcccCeeE---ecC-ch-hHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCC
Confidence 476656 78874 467777774442 443 11 38999999999999987432 23344 3445566552
Q ss_pred ---ChHHHHHHHHHhc
Q 014316 414 ---SSSELADQLLVNA 426 (427)
Q Consensus 414 ---~~~~la~~l~~~~ 426 (427)
+.+++++++.++.
T Consensus 410 ~~~~~~~l~~av~~vm 425 (481)
T PLN02992 410 EVISRSKIEALVRKVM 425 (481)
T ss_pred CcccHHHHHHHHHHHh
Confidence 3478888887753
No 196
>PLN00414 glycosyltransferase family protein
Probab=65.93 E-value=1.4e+02 Score=31.28 Aligned_cols=42 Identities=19% Similarity=0.048 Sum_probs=31.4
Q ss_pred CCCcceEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCC
Q 014316 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGG 43 (427)
Q Consensus 1 ~~~~~~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~ 43 (427)
|..+.+++++..-..|-..=+...|..|+.+ |++|++++...
T Consensus 1 ~~~~~HVvlvPfpaqGHi~PmL~LAk~Las~-G~~VT~vtt~~ 42 (446)
T PLN00414 1 MGSKFHAFMYPWFGFGHMIPYLHLANKLAEK-GHRVTFFLPKK 42 (446)
T ss_pred CCCCCEEEEecCcccchHHHHHHHHHHHHhC-CCEEEEEeCCc
Confidence 6666777776666555555578888999986 99999999654
No 197
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=63.70 E-value=1.6e+02 Score=29.21 Aligned_cols=114 Identities=18% Similarity=0.188 Sum_probs=61.7
Q ss_pred ceEEEEEeCCCCCCh---hHHHHHHHHHhhCCCcEEEEecCCCCC------------cccccCCCceEEEEeecCCCCCC
Q 014316 5 GRACVVVLGDLGRSP---RMQYQALSLARQMSLEVDVVAYGGSKP------------HAAILEHPSIHIHTMTQWPTIPR 69 (427)
Q Consensus 5 ~~~~v~~~~~~~~~~---r~~~~a~~La~~~g~~V~vi~~~~~~~------------~~~~~~~~~i~v~~~~~~~~~~~ 69 (427)
.+..++-+++.++++ -.......|.++ ||.|-|++-+++.+ .++...++|+.+..+| .. .
T Consensus 49 G~a~viGITG~PGaGKSTli~~L~~~l~~~-G~rVaVlAVDPSSp~TGGsiLGDRiRM~~~~~~~~vFiRs~~--sr--G 123 (323)
T COG1703 49 GNAHVIGITGVPGAGKSTLIEALGRELRER-GHRVAVLAVDPSSPFTGGSILGDRIRMQRLAVDPGVFIRSSP--SR--G 123 (323)
T ss_pred CCCcEEEecCCCCCchHHHHHHHHHHHHHC-CcEEEEEEECCCCCCCCccccccHhhHHhhccCCCeEEeecC--CC--c
Confidence 344455555444433 345566677775 99999999655433 2334457889888888 32 1
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccc
Q 014316 70 GLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFG 138 (427)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~ 138 (427)
.+.-..+..+...+.+ ....+|+|++-+-.---+-. -+.....+=+++...+.+
T Consensus 124 ~lGGlS~at~~~i~~l------------dAaG~DvIIVETVGvGQsev---~I~~~aDt~~~v~~pg~G 177 (323)
T COG1703 124 TLGGLSRATREAIKLL------------DAAGYDVIIVETVGVGQSEV---DIANMADTFLVVMIPGAG 177 (323)
T ss_pred cchhhhHHHHHHHHHH------------HhcCCCEEEEEecCCCcchh---HHhhhcceEEEEecCCCC
Confidence 2222333333333333 33899999998722111111 123333444555666554
No 198
>PLN02555 limonoid glucosyltransferase
Probab=62.49 E-value=75 Score=33.55 Aligned_cols=75 Identities=19% Similarity=0.190 Sum_probs=46.6
Q ss_pred CcEEEecCCCCcccHHHHH--hcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceecC-CcEEEeC
Q 014316 341 KRVAFRTMWLSAEDYPLLL--GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVD-KNGLLFS 413 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l--~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~~-~~G~l~~ 413 (427)
+++.+.+ |+++.+ +| .+..++| +++- -+.++||..+|+|+|+...-+ ....+.+. +.|+-+.
T Consensus 337 ~~g~v~~-W~PQ~~---iL~H~~v~~Fv-----tH~G--~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~ 405 (480)
T PLN02555 337 DKGKIVQ-WCPQEK---VLAHPSVACFV-----THCG--WNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLC 405 (480)
T ss_pred CceEEEe-cCCHHH---HhCCCccCeEE-----ecCC--cchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEcc
Confidence 3666665 788854 55 4445555 4431 238999999999999987332 23333333 5665551
Q ss_pred ---------ChHHHHHHHHHhc
Q 014316 414 ---------SSSELADQLLVNA 426 (427)
Q Consensus 414 ---------~~~~la~~l~~~~ 426 (427)
+.+++++++++++
T Consensus 406 ~~~~~~~~v~~~~v~~~v~~vm 427 (480)
T PLN02555 406 RGEAENKLITREEVAECLLEAT 427 (480)
T ss_pred CCccccCcCcHHHHHHHHHHHh
Confidence 3478888887754
No 199
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=61.79 E-value=40 Score=35.13 Aligned_cols=63 Identities=21% Similarity=0.400 Sum_probs=37.8
Q ss_pred cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec-cCc----cccceecCCcEEEe
Q 014316 342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSC----IEELVKVDKNGLLF 412 (427)
Q Consensus 342 ~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~-~~g----~~e~v~~~~~G~l~ 412 (427)
+|.+.+ |+|+.++. +..-.+..+. +++ |+. .++|+..+|+|+|+.. .+. ..-+.+++..+++.
T Consensus 336 nV~~~~-W~PQ~~ll--l~H~~v~~Fv---THg-G~n-St~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~ 403 (496)
T KOG1192|consen 336 NVVLSK-WAPQNDLL--LDHPAVGGFV---THG-GWN-STLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLD 403 (496)
T ss_pred ceEEec-CCCcHHHh--cCCCcCcEEE---ECC-ccc-HHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEe
Confidence 677766 89997766 2222233322 443 333 4699999999999765 232 33344555566655
No 200
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=59.87 E-value=37 Score=30.40 Aligned_cols=85 Identities=14% Similarity=0.038 Sum_probs=59.8
Q ss_pred CCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCC-----------CcccHHHHHhcCcEEEe--eccCCCCCCCchH
Q 014316 314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWL-----------SAEDYPLLLGSADLGVC--LHTSSSGLDLPMK 380 (427)
Q Consensus 314 ~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~-----------~~~~~~~~l~~adi~v~--p~~~s~~e~~p~~ 380 (427)
..+-++-|+|-|.--..+-+.++.+|. +|....... ...++.++++.||++++ |.+.....-+.-.
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~~~l~ell~~aDiv~~~~plt~~T~~li~~~ 112 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEYVSLDELLAQADIVSLHLPLTPETRGLINAE 112 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEESSHHHHHHH-SEEEE-SSSSTTTTTSBSHH
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhcccccceeeehhhhcchhhhhhhhhccccccceeeeee
Confidence 446788999999877777888888876 444443312 24577899999999987 2222233567789
Q ss_pred HHHHHcCCCcEEEeccCcc
Q 014316 381 VVDMFGCGLPVCAVSYSCI 399 (427)
Q Consensus 381 ~lEama~G~PVIas~~~g~ 399 (427)
.++.|--|.-+|.+.-|++
T Consensus 113 ~l~~mk~ga~lvN~aRG~~ 131 (178)
T PF02826_consen 113 FLAKMKPGAVLVNVARGEL 131 (178)
T ss_dssp HHHTSTTTEEEEESSSGGG
T ss_pred eeeccccceEEEeccchhh
Confidence 9999999998888877764
No 201
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=59.09 E-value=51 Score=31.74 Aligned_cols=93 Identities=18% Similarity=0.126 Sum_probs=65.9
Q ss_pred CChHHHHHHHHHcCCC--c-EEEecCCCCcccHHHHHhcCcEEEeeccCCCCC-CCchHHHHHHcCCCcEEEeccCcccc
Q 014316 326 PDKESYEEKIRRLRLK--R-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGL-DLPMKVVDMFGCGLPVCAVSYSCIEE 401 (427)
Q Consensus 326 ~~~~~~~~~~~~l~l~--~-V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e-~~p~~~lEama~G~PVIas~~~g~~e 401 (427)
|..+.++ .+.++|+. | |...|. .+.+.=.+++++..+-++....|-.. ++.-|+-=|+.+|+|||.-.-+..+.
T Consensus 159 P~~~~l~-~~~~~G~~~~~iia~~gP-fs~e~n~al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~~ 236 (256)
T TIGR00715 159 PYPQALA-QALKLGFPSDRIIAMRGP-FSEELEKALLREYRIDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQTIP 236 (256)
T ss_pred CCchhhH-HHHHcCCChhcEEEEeCC-CCHHHHHHHHHHcCCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCCC
Confidence 5455555 77888883 5 666676 88888788888776666544444333 78899999999999999988775421
Q ss_pred ceecCCcEEEeCChHHHHHHHHHhc
Q 014316 402 LVKVDKNGLLFSSSSELADQLLVNA 426 (427)
Q Consensus 402 ~v~~~~~G~l~~~~~~la~~l~~~~ 426 (427)
- +-.+++.+++.+.+.++.
T Consensus 237 ~------~~~~~~~~el~~~l~~~~ 255 (256)
T TIGR00715 237 G------VAIFDDISQLNQFVARLL 255 (256)
T ss_pred C------CccCCCHHHHHHHHHHhc
Confidence 1 235688888888877653
No 202
>PRK05647 purN phosphoribosylglycinamide formyltransferase; Reviewed
Probab=56.55 E-value=72 Score=29.42 Aligned_cols=55 Identities=16% Similarity=0.077 Sum_probs=29.8
Q ss_pred ceEEEEEeCCCCCChhHHHHHHHHHhh-CCCcEEEE-ecCCCCCcccccCCCceEEEEee
Q 014316 5 GRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVV-AYGGSKPHAAILEHPSIHIHTMT 62 (427)
Q Consensus 5 ~~~~v~~~~~~~~~~r~~~~a~~La~~-~g~~V~vi-~~~~~~~~~~~~~~~~i~v~~~~ 62 (427)
+|++|+..|+- ..++....++.++ .+++|.++ +...+-...+...+.||+++.++
T Consensus 2 ~ki~vl~sg~g---s~~~~ll~~~~~~~~~~~I~~vvs~~~~~~~~~~a~~~gIp~~~~~ 58 (200)
T PRK05647 2 KRIVVLASGNG---SNLQAIIDACAAGQLPAEIVAVISDRPDAYGLERAEAAGIPTFVLD 58 (200)
T ss_pred ceEEEEEcCCC---hhHHHHHHHHHcCCCCcEEEEEEecCccchHHHHHHHcCCCEEEEC
Confidence 45777776642 2344444455554 23556654 43332223345566799998876
No 203
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=56.33 E-value=1.1e+02 Score=26.76 Aligned_cols=100 Identities=15% Similarity=0.081 Sum_probs=54.0
Q ss_pred HHHHHHHHHhhCCCcEEEEecCCCCCcccc----cCCCce-EEEEeecCCCCCCCCcchhh-HHHHHHHHHHHHHHHHHH
Q 014316 21 MQYQALSLARQMSLEVDVVAYGGSKPHAAI----LEHPSI-HIHTMTQWPTIPRGLPKVLK-PVLLLLKPLIQFFMLLWF 94 (427)
Q Consensus 21 ~~~~a~~La~~~g~~V~vi~~~~~~~~~~~----~~~~~i-~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 94 (427)
+...+..|+++.|.+|++++.+..+...+. ....|. +++.+.. ..... .... ....+...+
T Consensus 20 ~l~~A~~La~~~g~~v~av~~G~~~~~~~~l~~~l~~~G~d~v~~~~~--~~~~~--~~~~~~a~~l~~~~--------- 86 (164)
T PF01012_consen 20 ALEAARRLAEALGGEVTAVVLGPAEEAAEALRKALAKYGADKVYHIDD--PALAE--YDPEAYADALAELI--------- 86 (164)
T ss_dssp HHHHHHHHHHCTTSEEEEEEEETCCCHHHHHHHHHHSTTESEEEEEE---GGGTT--C-HHHHHHHHHHHH---------
T ss_pred HHHHHHHHHhhcCCeEEEEEEecchhhHHHHhhhhhhcCCcEEEEecC--ccccc--cCHHHHHHHHHHHH---------
Confidence 445566777767889999998742322222 233455 7787762 11110 1111 122222222
Q ss_pred HHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccc
Q 014316 95 LCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFG 138 (427)
Q Consensus 95 ~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~ 138 (427)
+..+||+|++.. .....-++..++...+.|++-++.+..
T Consensus 87 ---~~~~~~lVl~~~--t~~g~~la~~lA~~L~~~~v~~v~~l~ 125 (164)
T PF01012_consen 87 ---KEEGPDLVLFGS--TSFGRDLAPRLAARLGAPLVTDVTDLE 125 (164)
T ss_dssp ---HHHT-SEEEEES--SHHHHHHHHHHHHHHT-EEEEEEEEEE
T ss_pred ---HhcCCCEEEEcC--cCCCCcHHHHHHHHhCCCccceEEEEE
Confidence 237899998876 233333456666667999998887664
No 204
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=56.18 E-value=12 Score=31.53 Aligned_cols=77 Identities=16% Similarity=0.135 Sum_probs=45.9
Q ss_pred EEEEEEeC-CCChHHHHHHHHHcCCCcEEEecCCCC------------------------cccHHHHHhcCcEEEeeccC
Q 014316 317 LLFIITGK-GPDKESYEEKIRRLRLKRVAFRTMWLS------------------------AEDYPLLLGSADLGVCLHTS 371 (427)
Q Consensus 317 ~~l~i~G~-G~~~~~~~~~~~~l~l~~V~f~g~~~~------------------------~~~~~~~l~~adi~v~p~~~ 371 (427)
+++.|+|- |..-..+.+.+.+. +++.+.+. ++ .+++.+++..+|+.+-.
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~--~~~~lv~~-v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~~DVvIDf--- 74 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILES--PGFELVGA-VDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEEADVVIDF--- 74 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS--TTEEEEEE-EETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-SEEEEE---
T ss_pred CEEEEECCCCHHHHHHHHHHHhc--CCcEEEEE-EecCCcccccchhhhhhCcCCcccccchhHHHhcccCCEEEEc---
Confidence 35678886 76556666666552 13444443 22 24688999999999874
Q ss_pred CCCCCCchHHHHHHcCCCcEEEeccCcc
Q 014316 372 SSGLDLPMKVVDMFGCGLPVCAVSYSCI 399 (427)
Q Consensus 372 s~~e~~p~~~lEama~G~PVIas~~~g~ 399 (427)
|..+..-.-+-.+..+|+|+|..-.|.-
T Consensus 75 T~p~~~~~~~~~~~~~g~~~ViGTTG~~ 102 (124)
T PF01113_consen 75 TNPDAVYDNLEYALKHGVPLVIGTTGFS 102 (124)
T ss_dssp S-HHHHHHHHHHHHHHT-EEEEE-SSSH
T ss_pred CChHHhHHHHHHHHhCCCCEEEECCCCC
Confidence 4334444456677888999998766653
No 205
>PF11071 DUF2872: Protein of unknown function (DUF2872); InterPro: IPR019884 This entry represents a family of uncharacterised proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.
Probab=55.06 E-value=38 Score=29.12 Aligned_cols=68 Identities=12% Similarity=0.007 Sum_probs=42.1
Q ss_pred HHHHhcCcEEEeeccCCCCCCCchHHH---HHHcCCCcEEEeccCccccceecCCc--EEEeCChHHHHHHHHHh
Q 014316 356 PLLLGSADLGVCLHTSSSGLDLPMKVV---DMFGCGLPVCAVSYSCIEELVKVDKN--GLLFSSSSELADQLLVN 425 (427)
Q Consensus 356 ~~~l~~adi~v~p~~~s~~e~~p~~~l---Eama~G~PVIas~~~g~~e~v~~~~~--G~l~~~~~~la~~l~~~ 425 (427)
.-++..||++|.-+...+. --+..+ =|.|.|+|.|.-.-..+.--+++=.. -..+.++++..+.|..+
T Consensus 67 ~~li~~aDvVVvrFGekYK--QWNaAfDAg~a~AlgKplI~lh~~~~~HpLKEvda~A~a~~et~~Qvv~iL~Yv 139 (141)
T PF11071_consen 67 RTLIEKADVVVVRFGEKYK--QWNAAFDAGYAAALGKPLITLHPEELHHPLKEVDAAALAVAETPEQVVEILRYV 139 (141)
T ss_pred HHHHhhCCEEEEEechHHH--HHHHHhhHHHHHHcCCCeEEecchhccccHHHHhHhhHhhhCCHHHHHHHHHHH
Confidence 3578899999985322211 122333 35789999999886665544443222 22338888888777654
No 206
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=53.28 E-value=40 Score=30.20 Aligned_cols=52 Identities=8% Similarity=0.052 Sum_probs=38.0
Q ss_pred CCCEEEEEEeCCCC-hHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEee
Q 014316 314 YPRLLFIITGKGPD-KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCL 368 (427)
Q Consensus 314 ~~~~~l~i~G~G~~-~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p 368 (427)
..+-+++|+|.|.. ...+.+...+.|. +|..... ..+++.+.+..||++|..
T Consensus 42 l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r--~~~~l~~~l~~aDiVIsa 94 (168)
T cd01080 42 LAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHS--KTKNLKEHTKQADIVIVA 94 (168)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEEC--CchhHHHHHhhCCEEEEc
Confidence 45678999999974 3335555555554 5777664 467899999999999984
No 207
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=52.71 E-value=43 Score=35.77 Aligned_cols=49 Identities=16% Similarity=0.153 Sum_probs=37.2
Q ss_pred EEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEecc
Q 014316 343 VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 396 (427)
Q Consensus 343 V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~ 396 (427)
|.=.|. ++.+++.++|+.+-++|=+ ....| |-+.+||+|.|+|.|-...
T Consensus 324 V~NHG~-l~~~ef~~lL~~akvfiGl--GfP~E--gPaPlEAia~G~vFlNp~~ 372 (559)
T PF15024_consen 324 VKNHGI-LSGDEFQQLLRKAKVFIGL--GFPYE--GPAPLEAIANGCVFLNPRF 372 (559)
T ss_pred hhhcCc-CCHHHHHHHHHhhhEeeec--CCCCC--CCChHHHHHcCCccccccC
Confidence 334566 8899999999999999953 11224 3389999999999997763
No 208
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=51.68 E-value=99 Score=29.33 Aligned_cols=65 Identities=14% Similarity=0.027 Sum_probs=42.2
Q ss_pred HHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCC-------CCCCchHHHHHHcCCCcEEEeccCc
Q 014316 330 SYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-------GLDLPMKVVDMFGCGLPVCAVSYSC 398 (427)
Q Consensus 330 ~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~-------~e~~p~~~lEama~G~PVIas~~~g 398 (427)
.+++..+++|.+ +..+-. .++..+.+..+|+..++=..+. ..++-..+-|+...|+|++.+..|.
T Consensus 52 ~~~~af~~lG~~-v~~l~~---~~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~~l~~~~~~G~~~~G~SAGA 123 (233)
T PRK05282 52 KVAEALAPLGIE-VTGIHR---VADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLAPIREAVKNGTPYIGWSAGA 123 (233)
T ss_pred HHHHHHHHCCCE-EEEecc---chhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHHHHHHHHHCCCEEEEECHHH
Confidence 345666677765 444333 4566788999998876311110 1344445778999999999998665
No 209
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=49.75 E-value=1e+02 Score=32.36 Aligned_cols=95 Identities=12% Similarity=0.128 Sum_probs=57.5
Q ss_pred CEEEEEEeC---CCChHHHHHHHHH-cCCC-cEEEecCCCC---cccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcC
Q 014316 316 RLLFIITGK---GPDKESYEEKIRR-LRLK-RVAFRTMWLS---AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGC 387 (427)
Q Consensus 316 ~~~l~i~G~---G~~~~~~~~~~~~-l~l~-~V~f~g~~~~---~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~ 387 (427)
.+-+.++|. |.-++.+-++.++ -+.. .+.+..+..+ ...+.+.++.|..+++|... +.-...++||+.+
T Consensus 290 ~~L~~F~G~~~~~~iR~~L~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~m~~S~FCL~p~Gd---~~ts~R~fdai~~ 366 (464)
T KOG1021|consen 290 PILAFFAGAPAGGQIRSILLDLWKKDPDTEVFVNCPRGKVSCDRPLNYMEGMQDSKFCLCPPGD---TPTSPRLFDAIVS 366 (464)
T ss_pred ceEEEEeccccCCcHHHHHHHHhhcCcCccccccCCCCccccCCcchHHHHhhcCeEEECCCCC---CcccHhHHHHHHh
Confidence 366777776 3334455445444 1111 2333222122 57889999999999997333 3233389999999
Q ss_pred CC-cEEEec--cCccccceecCCcEEEeC
Q 014316 388 GL-PVCAVS--YSCIEELVKVDKNGLLFS 413 (427)
Q Consensus 388 G~-PVIas~--~~g~~e~v~~~~~G~l~~ 413 (427)
|+ |||-++ .....+.++-.+-++.+.
T Consensus 367 gCvPViisd~~~lpf~~~~d~~~fSV~v~ 395 (464)
T KOG1021|consen 367 GCVPVIISDGIQLPFGDVLDWTEFSVFVP 395 (464)
T ss_pred CCccEEEcCCcccCcCCCccceEEEEEEE
Confidence 98 999998 345556554444455554
No 210
>PF12738 PTCB-BRCT: twin BRCT domain; PDB: 3PA6_A 3KTF_C 2WT8_C 3EF1_A 3EF0_A.
Probab=48.70 E-value=93 Score=22.37 Aligned_cols=59 Identities=17% Similarity=0.237 Sum_probs=39.8
Q ss_pred EEEEEe-CCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe
Q 014316 318 LFIITG-KGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 394 (427)
Q Consensus 318 ~l~i~G-~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas 394 (427)
.+.+.| .+++++.++++++.+| -.+.+. + -...+.+|+. ..-+.|.-.|...|+|||..
T Consensus 2 ~i~~sg~~~~~~~~l~~~i~~~G---g~~~~~-l--------t~~~THLI~~------~~~~~K~~~A~~~gi~vV~~ 61 (63)
T PF12738_consen 2 VICFSGFSGKERSQLRKLIEALG---GKYSKD-L--------TKKTTHLICS------SPEGKKYRKAKEWGIPVVSP 61 (63)
T ss_dssp EEEEEEB-TTTCCHHHHHHHCTT----EEESS-S--------STT-SEEEEE------S--HHHHHHHHHCTSEEEEH
T ss_pred EEEECCCCHHHHHHHHHHHHHCC---CEEecc-c--------cCCceEEEEe------CCCcHHHHHHHHCCCcEECC
Confidence 467777 5667888999999887 344443 2 2267777763 23567999999999999974
No 211
>PRK13234 nifH nitrogenase reductase; Reviewed
Probab=48.25 E-value=20 Score=35.14 Aligned_cols=41 Identities=17% Similarity=0.227 Sum_probs=31.9
Q ss_pred CCCcceEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecC
Q 014316 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYG 42 (427)
Q Consensus 1 ~~~~~~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~ 42 (427)
|.+|+++.|...|+.|.+.-..+.+..|+++ |+.|.+|-.+
T Consensus 1 ~~~~~~iai~~KGGvGKTt~~~nLa~~la~~-g~kVLliD~D 41 (295)
T PRK13234 1 MSKLRQIAFYGKGGIGKSTTSQNTLAALVEM-GQKILIVGCD 41 (295)
T ss_pred CCcceEEEEECCCCccHHHHHHHHHHHHHHC-CCeEEEEecc
Confidence 7888888886556666666677888999996 9999999544
No 212
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=48.25 E-value=1.1e+02 Score=27.22 Aligned_cols=37 Identities=19% Similarity=0.234 Sum_probs=29.2
Q ss_pred cccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 352 AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 352 ~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
...+.++++.||+++. +. |-| +++|.+..|+|.|..-
T Consensus 71 ~psl~e~I~~AdlVIs-----HA-GaG-S~letL~l~KPlivVv 107 (170)
T KOG3349|consen 71 SPSLTEDIRSADLVIS-----HA-GAG-SCLETLRLGKPLIVVV 107 (170)
T ss_pred CccHHHHHhhccEEEe-----cC-Ccc-hHHHHHHcCCCEEEEe
Confidence 7788999999999994 32 122 6999999999988753
No 213
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=48.24 E-value=1.3e+02 Score=28.77 Aligned_cols=70 Identities=19% Similarity=0.093 Sum_probs=45.5
Q ss_pred HHHHHHHHHcCCCcEEEecCCCC-----cccHHHHHhcCcEEEeeccCC-----C--CCCCchHHHHHHcCCCcEEEecc
Q 014316 329 ESYEEKIRRLRLKRVAFRTMWLS-----AEDYPLLLGSADLGVCLHTSS-----S--GLDLPMKVVDMFGCGLPVCAVSY 396 (427)
Q Consensus 329 ~~~~~~~~~l~l~~V~f~g~~~~-----~~~~~~~l~~adi~v~p~~~s-----~--~e~~p~~~lEama~G~PVIas~~ 396 (427)
+.+.+..+++|.++|..+.. -+ .++..+.+..||+.++.=... . ..++-..+-|+...|+|++.++.
T Consensus 46 ~~~~~~~~~lG~~~v~~l~i-~~r~~a~~~~~~~~l~~ad~I~~~GGnq~~l~~~l~~t~l~~~l~~~~~~G~vi~G~SA 124 (250)
T TIGR02069 46 ERYITIFSRLGVKEVKILDV-REREDASDENAIALLSNATGIFFTGGDQLRITSLLGDTPLLDRLRKRVHEGIILGGTSA 124 (250)
T ss_pred HHHHHHHHHcCCceeEEEec-CChHHccCHHHHHHHhhCCEEEEeCCCHHHHHHHHcCCcHHHHHHHHHHcCCeEEEccH
Confidence 34566677889876666553 22 245678899999998731110 0 12344467789999999999986
Q ss_pred Ccc
Q 014316 397 SCI 399 (427)
Q Consensus 397 ~g~ 399 (427)
|.+
T Consensus 125 GA~ 127 (250)
T TIGR02069 125 GAA 127 (250)
T ss_pred HHH
Confidence 654
No 214
>PLN02928 oxidoreductase family protein
Probab=48.00 E-value=66 Score=32.37 Aligned_cols=85 Identities=14% Similarity=0.083 Sum_probs=56.1
Q ss_pred CCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCC-----------------------CCcccHHHHHhcCcEEEee--
Q 014316 314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMW-----------------------LSAEDYPLLLGSADLGVCL-- 368 (427)
Q Consensus 314 ~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~-----------------------~~~~~~~~~l~~adi~v~p-- 368 (427)
..+-++-|+|-|.--..+.+.++.+|. +|...... .+..++.++++.||++++.
T Consensus 157 l~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~lP 235 (347)
T PLN02928 157 LFGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCCT 235 (347)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECCC
Confidence 345688999999766677777777775 44443210 1245788999999999872
Q ss_pred ccCCCCCCCchHHHHHHcCCCcEEEeccCcc
Q 014316 369 HTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI 399 (427)
Q Consensus 369 ~~~s~~e~~p~~~lEama~G~PVIas~~~g~ 399 (427)
.+.....-+.-..++.|--|.-+|-+.-|++
T Consensus 236 lt~~T~~li~~~~l~~Mk~ga~lINvaRG~l 266 (347)
T PLN02928 236 LTKETAGIVNDEFLSSMKKGALLVNIARGGL 266 (347)
T ss_pred CChHhhcccCHHHHhcCCCCeEEEECCCccc
Confidence 2222224456678888888877777766654
No 215
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=46.62 E-value=2.2e+02 Score=27.98 Aligned_cols=137 Identities=9% Similarity=0.034 Sum_probs=73.4
Q ss_pred EEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHH--HHH----
Q 014316 261 VVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY--EEK---- 334 (427)
Q Consensus 261 i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~--~~~---- 334 (427)
=.|.||+...||+..+++..++..+ -++..-++-|-....+.+ .+.
T Consensus 186 ~~yigR~Tt~kG~~~mfD~h~~~lK----------------------------~~~~~t~~~GierS~A~~~i~d~~~~~ 237 (355)
T PF11440_consen 186 NRYIGRQTTWKGPRRMFDLHEKILK----------------------------PAGFKTIMEGIERSPAKISIKDHGIPY 237 (355)
T ss_dssp EEEE--SSGGG-HHHHHHHHHHTTT----------------------------TTT-EEEEE---SSTHHHHHHHTT--E
T ss_pred ceeeeeeeeecCcHHHhhhHHHhcC----------------------------CcchhHHhhhhhcCCceeeeecCCccc
Confidence 3799999999999999998887554 356777777733221111 110
Q ss_pred -------HHHcCC-C--cEEEecCCCCcccHHHHHhcCcEEEeeccCC--CC-CCCchHHHHHHcCCC-cEEEeccCccc
Q 014316 335 -------IRRLRL-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSS--SG-LDLPMKVVDMFGCGL-PVCAVSYSCIE 400 (427)
Q Consensus 335 -------~~~l~l-~--~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s--~~-e~~p~~~lEama~G~-PVIas~~~g~~ 400 (427)
+.+..+ . -+-.+|. .=+++..+.++.+-.+.-..... .. +.+--+-+|..|||. ||.-.+.|...
T Consensus 238 ~y~~~~~~~~~~~~pN~~~~v~~~-Yi~~E~~~~Maks~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~ 316 (355)
T PF11440_consen 238 EYYPKLDCDEPKPAPNSPVPVYGP-YIRSEGLERMAKSLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENN 316 (355)
T ss_dssp EEE-CTGGGG---SSS--EEEESS---HHHHHHHHHTEEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHS
T ss_pred ccCccccccCcccCCCCcceecch-hhhHHHHHHHhhccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccc
Confidence 111122 1 2777887 44667777788777776431111 11 446678999999998 88887766543
Q ss_pred c-------ceecCCcEEEe--CChHHHHHHHHHhc
Q 014316 401 E-------LVKVDKNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 401 e-------~v~~~~~G~l~--~~~~~la~~l~~~~ 426 (427)
. ++.+....+.+ +|.++-.++|.+++
T Consensus 317 r~~~D~~~~~~~~~~~I~~De~dle~T~ekl~E~a 351 (355)
T PF11440_consen 317 RFTLDGTRYIDHPYSAIYFDENDLESTVEKLIEVA 351 (355)
T ss_dssp B-TTTSSBGGSS--S-EEE-TTSHHHHHHHHHHHH
T ss_pred eeeecCceeeccCcceeEeccchHHHHHHHHHHHh
Confidence 3 33333333444 56677777777764
No 216
>PRK06027 purU formyltetrahydrofolate deformylase; Reviewed
Probab=46.10 E-value=1.2e+02 Score=29.78 Aligned_cols=56 Identities=14% Similarity=0.202 Sum_probs=32.7
Q ss_pred CcceEEEEEeCCCCCChhHHHHHHHHHhh-CCCcEEEEecCCCCCcccccCCCceEEEEee
Q 014316 3 RRGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62 (427)
Q Consensus 3 ~~~~~~v~~~~~~~~~~r~~~~a~~La~~-~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~ 62 (427)
+++|++|+..|+ | ..++....+.... .+++|.++...... ......+.||+++.++
T Consensus 88 ~~~ri~vl~Sg~-g--snl~al~~~~~~~~~~~~i~~visn~~~-~~~lA~~~gIp~~~~~ 144 (286)
T PRK06027 88 ERKRVVILVSKE-D--HCLGDLLWRWRSGELPVEIAAVISNHDD-LRSLVERFGIPFHHVP 144 (286)
T ss_pred cCcEEEEEEcCC-C--CCHHHHHHHHHcCCCCcEEEEEEEcChh-HHHHHHHhCCCEEEec
Confidence 467788877775 2 2344333333332 24677666554433 3344667799999987
No 217
>PLN02670 transferase, transferring glycosyl groups
Probab=45.78 E-value=3.4e+02 Score=28.57 Aligned_cols=56 Identities=11% Similarity=0.068 Sum_probs=32.0
Q ss_pred eEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCC-cccc-c-CCCceEEEEee
Q 014316 6 RACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKP-HAAI-L-EHPSIHIHTMT 62 (427)
Q Consensus 6 ~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~-~~~~-~-~~~~i~v~~~~ 62 (427)
+++++....-|-..-+...|..|+.+ |+.||+++...... .... . ...+|+++.+|
T Consensus 8 HVvl~P~paqGHi~P~l~LAk~La~~-G~~vT~v~t~~n~~~~~~~~~~~~~~i~~~~lp 66 (472)
T PLN02670 8 HVAMFPWLAMGHLIPFLRLSKLLAQK-GHKISFISTPRNLHRLPKIPSQLSSSITLVSFP 66 (472)
T ss_pred EEEEeCChhhhHHHHHHHHHHHHHhC-CCEEEEEeCCchHHhhhhccccCCCCeeEEECC
Confidence 33333333333333467788889886 99999998654321 1100 0 12368888887
No 218
>PLN02210 UDP-glucosyl transferase
Probab=45.21 E-value=2.7e+02 Score=29.16 Aligned_cols=39 Identities=18% Similarity=0.132 Sum_probs=27.1
Q ss_pred cceEEEEEeCCCCCChhHHHHHHH--HHhhCCCcEEEEecCC
Q 014316 4 RGRACVVVLGDLGRSPRMQYQALS--LARQMSLEVDVVAYGG 43 (427)
Q Consensus 4 ~~~~~v~~~~~~~~~~r~~~~a~~--La~~~g~~V~vi~~~~ 43 (427)
..+++++....-|-..-+...+.. |+++ |+.|++++...
T Consensus 8 ~~hvv~~P~pa~GHi~P~l~La~~L~L~~~-G~~VT~v~t~~ 48 (456)
T PLN02210 8 ETHVLMVTLAFQGHINPMLKLAKHLSLSSK-NLHFTLATTEQ 48 (456)
T ss_pred CCEEEEeCCcccccHHHHHHHHHHHHhhcC-CcEEEEEeccc
Confidence 345555555555555557888888 5576 99999999764
No 219
>PRK06932 glycerate dehydrogenase; Provisional
Probab=44.60 E-value=76 Score=31.41 Aligned_cols=83 Identities=11% Similarity=0.027 Sum_probs=57.7
Q ss_pred CEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCC------CCcccHHHHHhcCcEEEe--eccCCCCCCCchHHHHHHcC
Q 014316 316 RLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMW------LSAEDYPLLLGSADLGVC--LHTSSSGLDLPMKVVDMFGC 387 (427)
Q Consensus 316 ~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~------~~~~~~~~~l~~adi~v~--p~~~s~~e~~p~~~lEama~ 387 (427)
.-++-|+|-|.--..+.+.++.+|. +|...... ....++.++++.||++++ |.+.....-+.-..++.|--
T Consensus 147 gktvgIiG~G~IG~~va~~l~~fg~-~V~~~~~~~~~~~~~~~~~l~ell~~sDiv~l~~Plt~~T~~li~~~~l~~mk~ 225 (314)
T PRK06932 147 GSTLGVFGKGCLGTEVGRLAQALGM-KVLYAEHKGASVCREGYTPFEEVLKQADIVTLHCPLTETTQNLINAETLALMKP 225 (314)
T ss_pred CCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCcccccccccCCHHHHHHhCCEEEEcCCCChHHhcccCHHHHHhCCC
Confidence 4688999999766777777777775 34443320 113468899999999986 32222234567789999999
Q ss_pred CCcEEEeccCcc
Q 014316 388 GLPVCAVSYSCI 399 (427)
Q Consensus 388 G~PVIas~~~g~ 399 (427)
|.-+|.+.-|++
T Consensus 226 ga~lIN~aRG~~ 237 (314)
T PRK06932 226 TAFLINTGRGPL 237 (314)
T ss_pred CeEEEECCCccc
Confidence 988888877764
No 220
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=43.54 E-value=1e+02 Score=30.42 Aligned_cols=84 Identities=13% Similarity=0.077 Sum_probs=56.3
Q ss_pred CCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCC-------CCcccHHHHHhcCcEEEe--eccCCCCCCCchHHHHHH
Q 014316 315 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMW-------LSAEDYPLLLGSADLGVC--LHTSSSGLDLPMKVVDMF 385 (427)
Q Consensus 315 ~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~-------~~~~~~~~~l~~adi~v~--p~~~s~~e~~p~~~lEam 385 (427)
..-.+-|+|-|.--..+.+.++.+|. +|...... +...++.++++.||++++ |.++....-+.-..++.|
T Consensus 144 ~gktvGIiG~G~IG~~vA~~~~~fgm-~V~~~d~~~~~~~~~~~~~~l~ell~~sDvv~lh~Plt~~T~~li~~~~~~~M 222 (311)
T PRK08410 144 KGKKWGIIGLGTIGKRVAKIAQAFGA-KVVYYSTSGKNKNEEYERVSLEELLKTSDIISIHAPLNEKTKNLIAYKELKLL 222 (311)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhcCC-EEEEECCCccccccCceeecHHHHhhcCCEEEEeCCCCchhhcccCHHHHHhC
Confidence 35678899999766677777777765 44443210 123478999999999976 322222245677888888
Q ss_pred cCCCcEEEeccCcc
Q 014316 386 GCGLPVCAVSYSCI 399 (427)
Q Consensus 386 a~G~PVIas~~~g~ 399 (427)
--|.-+|.+.-|++
T Consensus 223 k~~a~lIN~aRG~v 236 (311)
T PRK08410 223 KDGAILINVGRGGI 236 (311)
T ss_pred CCCeEEEECCCccc
Confidence 88877777776654
No 221
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=43.53 E-value=42 Score=30.94 Aligned_cols=38 Identities=21% Similarity=0.203 Sum_probs=26.6
Q ss_pred eEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCC
Q 014316 6 RACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSK 45 (427)
Q Consensus 6 ~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~ 45 (427)
+|++....++ .++++...+.+|.+. ||+|.|+++..++
T Consensus 2 ~ILlTNDDGi-~a~Gi~aL~~~L~~~-g~~V~VvAP~~~~ 39 (196)
T PF01975_consen 2 RILLTNDDGI-DAPGIRALAKALSAL-GHDVVVVAPDSEQ 39 (196)
T ss_dssp EEEEE-SS-T-TSHHHHHHHHHHTTT-SSEEEEEEESSST
T ss_pred eEEEEcCCCC-CCHHHHHHHHHHHhc-CCeEEEEeCCCCC
Confidence 3455444444 678999888899664 8999999987543
No 222
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=43.43 E-value=1e+02 Score=30.77 Aligned_cols=82 Identities=13% Similarity=0.089 Sum_probs=55.7
Q ss_pred CEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCC-----------cccHHHHHhcCcEEEeeccCCC---CCCCchHH
Q 014316 316 RLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLS-----------AEDYPLLLGSADLGVCLHTSSS---GLDLPMKV 381 (427)
Q Consensus 316 ~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~-----------~~~~~~~l~~adi~v~p~~~s~---~e~~p~~~ 381 (427)
.-.+=|+|-|.--..+.+.++.+|.+ |.....+.+ .+++.+++++||++++ +.+-. .--+.-..
T Consensus 142 gkTvGIiG~G~IG~~va~~l~afgm~-v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~sDiv~l-h~PlT~eT~g~i~~~~ 219 (324)
T COG0111 142 GKTVGIIGLGRIGRAVAKRLKAFGMK-VIGYDPYSPRERAGVDGVVGVDSLDELLAEADILTL-HLPLTPETRGLINAEE 219 (324)
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCe-EEEECCCCchhhhccccceecccHHHHHhhCCEEEE-cCCCCcchhcccCHHH
Confidence 45789999997777777788877753 333333222 3569999999999987 33222 23455678
Q ss_pred HHHHcCCCcEEEeccCcc
Q 014316 382 VDMFGCGLPVCAVSYSCI 399 (427)
Q Consensus 382 lEama~G~PVIas~~~g~ 399 (427)
+..|--|.-+|-+.-|++
T Consensus 220 ~a~MK~gailIN~aRG~v 237 (324)
T COG0111 220 LAKMKPGAILINAARGGV 237 (324)
T ss_pred HhhCCCCeEEEECCCcce
Confidence 888888886776666664
No 223
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=42.69 E-value=54 Score=31.39 Aligned_cols=44 Identities=14% Similarity=0.115 Sum_probs=29.7
Q ss_pred CCCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCc
Q 014316 313 LYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSAD 363 (427)
Q Consensus 313 ~~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~ad 363 (427)
..|+..|+.+|+|++++ +.++.+++.-+.+ . +..++...+.+-+
T Consensus 227 g~p~~~f~~IGDG~eEe---~aAk~l~wPFw~I-~---~h~Dl~~l~~aL~ 270 (274)
T TIGR01658 227 GHPKVRFCAIGDGWEEC---TAAQAMNWPFVKI-D---LHPDSSHRFPGLT 270 (274)
T ss_pred CCCCceEEEeCCChhHH---HHHHhcCCCeEEe-e---cCCCHHHhCccCC
Confidence 46789999999998544 5677888775555 2 2566666555433
No 224
>PRK06487 glycerate dehydrogenase; Provisional
Probab=41.85 E-value=91 Score=30.89 Aligned_cols=84 Identities=11% Similarity=0.011 Sum_probs=57.2
Q ss_pred CCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCC-----CCcccHHHHHhcCcEEEe--eccCCCCCCCchHHHHHHcC
Q 014316 315 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMW-----LSAEDYPLLLGSADLGVC--LHTSSSGLDLPMKVVDMFGC 387 (427)
Q Consensus 315 ~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~-----~~~~~~~~~l~~adi~v~--p~~~s~~e~~p~~~lEama~ 387 (427)
..-++-|+|-|.--..+.+.++.+|. +|...... ....++.++++.||++++ |.+.....-+.-..++.|--
T Consensus 147 ~gktvgIiG~G~IG~~vA~~l~~fgm-~V~~~~~~~~~~~~~~~~l~ell~~sDiv~l~lPlt~~T~~li~~~~~~~mk~ 225 (317)
T PRK06487 147 EGKTLGLLGHGELGGAVARLAEAFGM-RVLIGQLPGRPARPDRLPLDELLPQVDALTLHCPLTEHTRHLIGARELALMKP 225 (317)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCCcccccccCHHHHHHhCCEEEECCCCChHHhcCcCHHHHhcCCC
Confidence 34678999999766677777777765 34433320 123468999999999986 22222224567788899988
Q ss_pred CCcEEEeccCcc
Q 014316 388 GLPVCAVSYSCI 399 (427)
Q Consensus 388 G~PVIas~~~g~ 399 (427)
|.-+|-+.-|++
T Consensus 226 ga~lIN~aRG~v 237 (317)
T PRK06487 226 GALLINTARGGL 237 (317)
T ss_pred CeEEEECCCccc
Confidence 888887776664
No 225
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=41.48 E-value=1.5e+02 Score=28.25 Aligned_cols=38 Identities=26% Similarity=0.411 Sum_probs=28.6
Q ss_pred ceEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecC
Q 014316 5 GRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYG 42 (427)
Q Consensus 5 ~~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~ 42 (427)
-++-++-+|++|.|.-+....-+.|.+.+.+|.+++.+
T Consensus 3 vKiGiiKlGNig~s~~idl~lDErAdRedI~vrv~gsG 40 (277)
T PRK00994 3 VKIGIIKLGNIGMSPVIDLLLDERADREDIDVRVVGSG 40 (277)
T ss_pred EEEEEEEecccchHHHHHHHHHhhhcccCceEEEeccC
Confidence 35667788999887777766667777768888888754
No 226
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=40.48 E-value=3.4e+02 Score=26.00 Aligned_cols=126 Identities=9% Similarity=0.071 Sum_probs=73.1
Q ss_pred CCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCC--hHHHHHH
Q 014316 257 RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD--KESYEEK 334 (427)
Q Consensus 257 ~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~--~~~~~~~ 334 (427)
-|++++..-+-....|.+.+++.+++. .+.-+++=+-|. .+++.+.
T Consensus 88 ~plv~m~Y~Npi~~~G~e~f~~~~~~a--------------------------------GvdgviipDlp~ee~~~~~~~ 135 (256)
T TIGR00262 88 IPIGLLTYYNLIFRKGVEEFYAKCKEV--------------------------------GVDGVLVADLPLEESGDLVEA 135 (256)
T ss_pred CCEEEEEeccHHhhhhHHHHHHHHHHc--------------------------------CCCEEEECCCChHHHHHHHHH
Confidence 454444444443467888888877763 233334444443 3456677
Q ss_pred HHHcCCCcEEEecCCCCcccHHHHHhcCc--EEEeeccCCCCC--CCchHHHHHHc-----CCCcEEEec-cC---cccc
Q 014316 335 IRRLRLKRVAFRTMWLSAEDYPLLLGSAD--LGVCLHTSSSGL--DLPMKVVDMFG-----CGLPVCAVS-YS---CIEE 401 (427)
Q Consensus 335 ~~~l~l~~V~f~g~~~~~~~~~~~l~~ad--i~v~p~~~s~~e--~~p~~~lEama-----~G~PVIas~-~~---g~~e 401 (427)
++++|++-+.+...--+.+.+..+.+.++ ++++....-.+. .++..+.|.+. .++||++-- +. .+.+
T Consensus 136 ~~~~gl~~i~lv~P~T~~eri~~i~~~~~gfiy~vs~~G~TG~~~~~~~~~~~~i~~lr~~~~~pi~vgfGI~~~e~~~~ 215 (256)
T TIGR00262 136 AKKHGVKPIFLVAPNADDERLKQIAEKSQGFVYLVSRAGVTGARNRAASALNELVKRLKAYSAKPVLVGFGISKPEQVKQ 215 (256)
T ss_pred HHHCCCcEEEEECCCCCHHHHHHHHHhCCCCEEEEECCCCCCCcccCChhHHHHHHHHHhhcCCCEEEeCCCCCHHHHHH
Confidence 88889887777776344678889999999 444421111112 24444555543 578877621 11 2344
Q ss_pred ceecCCcEEEeCC
Q 014316 402 LVKVDKNGLLFSS 414 (427)
Q Consensus 402 ~v~~~~~G~l~~~ 414 (427)
+...|-+|+++++
T Consensus 216 ~~~~GADgvVvGS 228 (256)
T TIGR00262 216 AIDAGADGVIVGS 228 (256)
T ss_pred HHHcCCCEEEECH
Confidence 5556789999965
No 227
>cd00027 BRCT Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within many DNA damage repair and cell cycle checkpoint proteins. The unique diversity of this domain superfamily allows BRCT modules to interact forming homo/hetero BRCT multimers, BRCT-non-BRCT interactions, and interactions within DNA strand breaks.
Probab=40.42 E-value=1.1e+02 Score=21.33 Aligned_cols=62 Identities=24% Similarity=0.390 Sum_probs=40.8
Q ss_pred EEEEEEeC--CCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe
Q 014316 317 LLFIITGK--GPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 394 (427)
Q Consensus 317 ~~l~i~G~--G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas 394 (427)
..|.+.|. +..++.++++++.+|-. +... ++ ...+.+|+. +.. .+....++...|+|+|..
T Consensus 2 ~~~~i~g~~~~~~~~~l~~~i~~~Gg~---v~~~-~~--------~~~thvI~~---~~~--~~~~~~~~~~~~~~iV~~ 64 (72)
T cd00027 2 LTFVITGDLPSEERDELKELIEKLGGK---VTSS-VS--------KKTTHVIVG---SDA--GPKKLLKAIKLGIPIVTP 64 (72)
T ss_pred CEEEEEecCCCcCHHHHHHHHHHcCCE---Eecc-cc--------CCceEEEEC---CCC--CchHHHHHHHcCCeEecH
Confidence 46788886 67889999999998731 2111 11 466777763 211 122378889999999975
Q ss_pred c
Q 014316 395 S 395 (427)
Q Consensus 395 ~ 395 (427)
+
T Consensus 65 ~ 65 (72)
T cd00027 65 E 65 (72)
T ss_pred H
Confidence 4
No 228
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=40.20 E-value=4.7e+02 Score=27.61 Aligned_cols=56 Identities=13% Similarity=0.172 Sum_probs=33.0
Q ss_pred eEEEEEeCCCCCChhHHHHHHHHH-hhCCCcEEEEecCCCCCc--ccccCCCceEEEEee
Q 014316 6 RACVVVLGDLGRSPRMQYQALSLA-RQMSLEVDVVAYGGSKPH--AAILEHPSIHIHTMT 62 (427)
Q Consensus 6 ~~~v~~~~~~~~~~r~~~~a~~La-~~~g~~V~vi~~~~~~~~--~~~~~~~~i~v~~~~ 62 (427)
+++++.....|-..=+...|..|+ .+ |+.||+++....... .......+|++..+|
T Consensus 7 HVvl~P~paqGHi~P~l~LAk~La~~~-g~~vT~v~t~~n~~~~~~~~~~~~~i~~~~lp 65 (481)
T PLN02992 7 HAAMFSSPGMGHVIPVIELGKRLSANH-GFHVTVFVLETDAASAQSKFLNSTGVDIVGLP 65 (481)
T ss_pred EEEEeCCcccchHHHHHHHHHHHHhCC-CcEEEEEeCCCchhhhhhccccCCCceEEECC
Confidence 444444443444344677888887 55 999999987643210 111122368888887
No 229
>PF13905 Thioredoxin_8: Thioredoxin-like; PDB: 1FG4_A 1I5G_A 1OC8_B 1O6J_A 1OC9_B 1O81_A 3FKF_A 1O85_A 1O7U_A 1O8W_A ....
Probab=39.90 E-value=1.7e+02 Score=22.46 Aligned_cols=47 Identities=11% Similarity=0.188 Sum_probs=29.5
Q ss_pred CCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcE
Q 014316 315 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADL 364 (427)
Q Consensus 315 ~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi 364 (427)
.++.++.+.-..+.+++++..++.+.....+.-. .+.-..+....++
T Consensus 34 ~~v~~v~Vs~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~i 80 (95)
T PF13905_consen 34 DDVEFVFVSLDEDEEEWKKFLKKNNFPWYNVPFD---DDNNSELLKKYGI 80 (95)
T ss_dssp TTEEEEEEE-SSSHHHHHHHHHTCTTSSEEEETT---THHHHHHHHHTT-
T ss_pred CCEEEEEEEeCCCHHHHHHHHHhcCCCceEEeeC---cchHHHHHHHCCC
Confidence 4799999998888889999999886654444322 3334444444433
No 230
>TIGR03646 YtoQ_fam YtoQ family protein. Members of this family are uncharacterized proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.
Probab=39.89 E-value=76 Score=27.35 Aligned_cols=66 Identities=15% Similarity=0.106 Sum_probs=40.3
Q ss_pred HHHhcCcEEEeeccCCCCCCCchHHHH---HHcCCCcEEEeccCccccceecCCcE--EEeCChHHHHHHHHH
Q 014316 357 LLLGSADLGVCLHTSSSGLDLPMKVVD---MFGCGLPVCAVSYSCIEELVKVDKNG--LLFSSSSELADQLLV 424 (427)
Q Consensus 357 ~~l~~adi~v~p~~~s~~e~~p~~~lE---ama~G~PVIas~~~g~~e~v~~~~~G--~l~~~~~~la~~l~~ 424 (427)
.++..||++|.-+...+. --+..++ |.|.|+|.|.-.-..+.--+++=... ..++++++..+.|..
T Consensus 71 ~li~~aDvvVvrFGekYK--QWNaAfDAg~aaAlgKplI~lh~~~~~HpLKEvdaaA~avaetp~Qvv~iL~Y 141 (144)
T TIGR03646 71 KLIEKADVVIALFGEKYK--QWNAAFDAGYAAALGKPLIILRPEELIHPLKEVDNKAQAVVETPEQAIETLKY 141 (144)
T ss_pred HHHhhCCEEEEEechHHH--HHHHHhhHHHHHHcCCCeEEecchhccccHHHHhHHHHHHhcCHHHHHHHHHH
Confidence 578899999985332221 2233333 57899999998766654444432222 223778877777664
No 231
>PTZ00182 3-methyl-2-oxobutanate dehydrogenase; Provisional
Probab=38.79 E-value=1.1e+02 Score=30.85 Aligned_cols=107 Identities=9% Similarity=0.034 Sum_probs=67.0
Q ss_pred EEEEEEeCCCChHHHHHHHHHc---CCC----cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCC-
Q 014316 317 LLFIITGKGPDKESYEEKIRRL---RLK----RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCG- 388 (427)
Q Consensus 317 ~~l~i~G~G~~~~~~~~~~~~l---~l~----~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G- 388 (427)
..+.|++.|.......+.++.| |++ ++.++-. ++.+.+.+.++.++-++........-|++..+.|.++-.
T Consensus 234 ~di~Iia~Gs~~~~aleAa~~L~~~Gi~v~vI~~~~l~P-ld~e~i~~~~~~~~~IvvvEE~~~~GGlG~~Va~~l~e~~ 312 (355)
T PTZ00182 234 KDVTIVGYGSQVHVALKAAEELAKEGISCEVIDLRSLRP-WDRETIVKSVKKTGRCVIVHEAPPTCGIGAEIAAQIMEDC 312 (355)
T ss_pred CCEEEEEeCHHHHHHHHHHHHHHhCCCcEEEEEEeeCCC-CCHHHHHHHHhcCCEEEEEEeCCCCCCHHHHHHHHHHHhh
Confidence 4577788887666666565554 443 3566655 677788898988888776544444478999998888663
Q ss_pred -----CcEEEeccCccccceecCC--cEEEeCChHHHHHHHHHhc
Q 014316 389 -----LPVCAVSYSCIEELVKVDK--NGLLFSSSSELADQLLVNA 426 (427)
Q Consensus 389 -----~PVIas~~~g~~e~v~~~~--~G~l~~~~~~la~~l~~~~ 426 (427)
.|+.--.+. ...+.+.. -..+..+.+.+.+++.+++
T Consensus 313 ~~~l~~pv~ri~~~--d~~~p~~~~le~~~~~~~~~i~~~~~~~~ 355 (355)
T PTZ00182 313 FLYLEAPIKRVCGA--DTPFPYAKNLEPAYLPDKEKVVEAAKRVL 355 (355)
T ss_pred hhhcCCCeEEeCCC--CccCCCChHHHHHhCCCHHHHHHHHHHhC
Confidence 366533222 22232221 1223477888888888764
No 232
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=38.68 E-value=1.7e+02 Score=22.14 Aligned_cols=59 Identities=12% Similarity=0.156 Sum_probs=37.9
Q ss_pred EEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCC-CChH-HHHHHHHH
Q 014316 260 LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDKE-SYEEKIRR 337 (427)
Q Consensus 260 ~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G-~~~~-~~~~~~~~ 337 (427)
+++.-||- ..+...+-+++.++.++ .|+.. ++-|.. .-.+ -.++.+++
T Consensus 6 Vli~GgR~--~~D~~~i~~~Ld~~~~~---------------------------~~~~~-lvhGga~~GaD~iA~~wA~~ 55 (71)
T PF10686_consen 6 VLITGGRD--WTDHELIWAALDKVHAR---------------------------HPDMV-LVHGGAPKGADRIAARWARE 55 (71)
T ss_pred EEEEECCc--cccHHHHHHHHHHHHHh---------------------------CCCEE-EEECCCCCCHHHHHHHHHHH
Confidence 44444442 34888899999998877 77766 555544 2233 34567788
Q ss_pred cCCCcEEEecC
Q 014316 338 LRLKRVAFRTM 348 (427)
Q Consensus 338 l~l~~V~f~g~ 348 (427)
.++..+.|..-
T Consensus 56 ~gv~~~~~~ad 66 (71)
T PF10686_consen 56 RGVPVIRFPAD 66 (71)
T ss_pred CCCeeEEeCcC
Confidence 88877777543
No 233
>PRK13011 formyltetrahydrofolate deformylase; Reviewed
Probab=38.51 E-value=2.3e+02 Score=27.69 Aligned_cols=56 Identities=9% Similarity=0.070 Sum_probs=30.8
Q ss_pred CcceEEEEEeCCCCCChhHHHHHHHHHhh-CCCcEEEEecCCCCCcccccCCCceEEEEee
Q 014316 3 RRGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62 (427)
Q Consensus 3 ~~~~~~v~~~~~~~~~~r~~~~a~~La~~-~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~ 62 (427)
+++|++|+..+. ...++....+.... .+++|.++...... ......+.||+++.++
T Consensus 88 ~~~ri~vl~Sg~---g~nl~al~~~~~~~~~~~~i~~visn~~~-~~~lA~~~gIp~~~~~ 144 (286)
T PRK13011 88 ARPKVLIMVSKF---DHCLNDLLYRWRIGELPMDIVGVVSNHPD-LEPLAAWHGIPFHHFP 144 (286)
T ss_pred cCceEEEEEcCC---cccHHHHHHHHHcCCCCcEEEEEEECCcc-HHHHHHHhCCCEEEeC
Confidence 456777777762 12344333333332 24677666443322 3334566799999887
No 234
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=37.79 E-value=1.4e+02 Score=30.86 Aligned_cols=84 Identities=15% Similarity=0.116 Sum_probs=50.0
Q ss_pred CCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecC----------------CCCcccHHHHHhcCcEEEeeccCCCCCCC
Q 014316 314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTM----------------WLSAEDYPLLLGSADLGVCLHTSSSGLDL 377 (427)
Q Consensus 314 ~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~----------------~~~~~~~~~~l~~adi~v~p~~~s~~e~~ 377 (427)
..+-++.++|.|......-......|..++.+.+. ..+.+++.+.+..+|++++...+++. -+
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l~~~l~~aDiVI~aT~a~~~-vi 257 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSELPQLIKKADIIIAAVNVLEY-IV 257 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHHHHHHHhccCCEEEECcCCCCe-eE
Confidence 34567899998865444433444445444444332 12346678889999999984222222 11
Q ss_pred chHHHHHHcCCCcEEEeccCccccc
Q 014316 378 PMKVVDMFGCGLPVCAVSYSCIEEL 402 (427)
Q Consensus 378 p~~~lEama~G~PVIas~~~g~~e~ 402 (427)
-..+..+.|.+--|.+-.+++
T Consensus 258 ----~~~~~~~~~~~~iDLavPRdi 278 (414)
T PRK13940 258 ----TCKYVGDKPRVFIDISIPQAL 278 (414)
T ss_pred ----CHHHhCCCCeEEEEeCCCCCC
Confidence 133445789998887766664
No 235
>KOG2884 consensus 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones]
Probab=37.48 E-value=2.2e+02 Score=26.75 Aligned_cols=26 Identities=23% Similarity=0.130 Sum_probs=15.3
Q ss_pred eEEEEEeecC-CCCCHHHHHHHHHhhHHH
Q 014316 259 ALVVSSTSWT-PDEDFGILLEAALMYDRR 286 (427)
Q Consensus 259 ~~i~~~g~~~-~~K~~~~Li~a~~~l~~~ 286 (427)
.+|+|+|+=. ..+. .|+..++.+++.
T Consensus 109 riVvFvGSpi~e~ek--eLv~~akrlkk~ 135 (259)
T KOG2884|consen 109 RIVVFVGSPIEESEK--ELVKLAKRLKKN 135 (259)
T ss_pred EEEEEecCcchhhHH--HHHHHHHHHHhc
Confidence 3677777633 3222 666667777664
No 236
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=36.56 E-value=1.8e+02 Score=26.85 Aligned_cols=80 Identities=14% Similarity=0.042 Sum_probs=47.4
Q ss_pred CEEEEEEeCCCC--hH---HHHHHHHHc-CCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCC-------CCCCchHHH
Q 014316 316 RLLFIITGKGPD--KE---SYEEKIRRL-RLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-------GLDLPMKVV 382 (427)
Q Consensus 316 ~~~l~i~G~G~~--~~---~~~~~~~~l-~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~-------~e~~p~~~l 382 (427)
+.++.++...+. .+ .+.+..+++ |.+.+.+.- .+.++..+.+..||+.++|=.+.. ..++-..+-
T Consensus 31 ~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~--~~~~~~~~~l~~ad~I~l~GG~~~~~~~~l~~~~l~~~l~ 108 (212)
T cd03146 31 RPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHL--FDTEDPLDALLEADVIYVGGGNTFNLLAQWREHGLDAILK 108 (212)
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEec--cCcccHHHHHhcCCEEEECCchHHHHHHHHHHcCHHHHHH
Confidence 456666665432 22 234455666 664333322 235677899999999998621100 023444566
Q ss_pred HHHcCCCcEEEeccC
Q 014316 383 DMFGCGLPVCAVSYS 397 (427)
Q Consensus 383 Eama~G~PVIas~~~ 397 (427)
|+...|+|++.+..|
T Consensus 109 ~~~~~g~~i~G~SAG 123 (212)
T cd03146 109 AALERGVVYIGWSAG 123 (212)
T ss_pred HHHHCCCEEEEECHh
Confidence 677789999998755
No 237
>TIGR00288 conserved hypothetical protein TIGR00288. This family of orthologs is restricted to but universal among the completed archaeal genomes so far. Eubacterial proteins showing at least local homology include slr1870 from Synechocystis PCC6803 and two proteins from Aquifex aeolicusr, none of which is characterized.
Probab=36.13 E-value=1.6e+02 Score=26.34 Aligned_cols=68 Identities=16% Similarity=0.058 Sum_probs=46.3
Q ss_pred CCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCC
Q 014316 270 DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMW 349 (427)
Q Consensus 270 ~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~ 349 (427)
.=++...++|+..+... .-+.-.++.|||+. ..+-+.+++.|. .|.-.|.
T Consensus 88 ~~Dv~laIDame~~~~~---------------------------~iD~~vLvSgD~DF-~~Lv~~lre~G~-~V~v~g~- 137 (160)
T TIGR00288 88 DVDVRMAVEAMELIYNP---------------------------NIDAVALVTRDADF-LPVINKAKENGK-ETIVIGA- 137 (160)
T ss_pred cccHHHHHHHHHHhccC---------------------------CCCEEEEEeccHhH-HHHHHHHHHCCC-EEEEEeC-
Confidence 45889999999887432 34677788888864 444455566553 5666674
Q ss_pred CCcccHHHHHhcCcEEEee
Q 014316 350 LSAEDYPLLLGSADLGVCL 368 (427)
Q Consensus 350 ~~~~~~~~~l~~adi~v~p 368 (427)
+..--.++.++||-|+..
T Consensus 138 -~~~ts~~L~~acd~FI~L 155 (160)
T TIGR00288 138 -EPGFSTALQNSADIAIIL 155 (160)
T ss_pred -CCCChHHHHHhcCeEEeC
Confidence 334556899999999864
No 238
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=35.84 E-value=1.9e+02 Score=31.60 Aligned_cols=75 Identities=17% Similarity=0.281 Sum_probs=51.2
Q ss_pred CCCEEEEEEe---CCCChHHHHHHHHHcCCC--cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCC
Q 014316 314 YPRLLFIITG---KGPDKESYEEKIRRLRLK--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCG 388 (427)
Q Consensus 314 ~~~~~l~i~G---~G~~~~~~~~~~~~l~l~--~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G 388 (427)
.|+..|.+.- -| +..++..+.++|++ +|.|..- ...+|=-...+-+|+++-.+ .-.+.+ +-.|.+.+|
T Consensus 786 VPnS~LwllrfPa~g--e~rf~ty~~~~Gl~p~riifs~v-a~k~eHvrr~~LaDv~LDTp-lcnGhT---Tg~dvLw~G 858 (966)
T KOG4626|consen 786 VPNSVLWLLRFPAVG--EQRFRTYAEQLGLEPDRIIFSPV-AAKEEHVRRGQLADVCLDTP-LCNGHT---TGMDVLWAG 858 (966)
T ss_pred CCcceeEEEeccccc--hHHHHHHHHHhCCCccceeeccc-cchHHHHHhhhhhhhcccCc-CcCCcc---cchhhhccC
Confidence 6775554433 23 36788999999994 7999886 55566666788899988521 122222 345788999
Q ss_pred CcEEEec
Q 014316 389 LPVCAVS 395 (427)
Q Consensus 389 ~PVIas~ 395 (427)
+|+|+-.
T Consensus 859 vPmVTmp 865 (966)
T KOG4626|consen 859 VPMVTMP 865 (966)
T ss_pred Cceeecc
Confidence 9999864
No 239
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=35.80 E-value=1.6e+02 Score=29.30 Aligned_cols=83 Identities=19% Similarity=0.193 Sum_probs=55.3
Q ss_pred CCCEE-E-EEEeCCCC-----hHHHHHHHHHcCCCcEEEecCCCCcccHHH----HHhcCcEEEeeccCCCCCCCchHHH
Q 014316 314 YPRLL-F-IITGKGPD-----KESYEEKIRRLRLKRVAFRTMWLSAEDYPL----LLGSADLGVCLHTSSSGLDLPMKVV 382 (427)
Q Consensus 314 ~~~~~-l-~i~G~G~~-----~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~----~l~~adi~v~p~~~s~~e~~p~~~l 382 (427)
.|+++ + ++...|.. .+++++.++..|++=+...- -+..|++. +....|+...|.+....-++...+.
T Consensus 156 ~Pnak~Igv~Y~p~E~ns~~l~eelk~~A~~~Gl~vve~~v--~~~ndi~~a~~~l~g~~d~i~~p~dn~i~s~~~~l~~ 233 (322)
T COG2984 156 LPNAKSIGVLYNPGEANSVSLVEELKKEARKAGLEVVEAAV--TSVNDIPRAVQALLGKVDVIYIPTDNLIVSAIESLLQ 233 (322)
T ss_pred CCCCeeEEEEeCCCCcccHHHHHHHHHHHHHCCCEEEEEec--CcccccHHHHHHhcCCCcEEEEecchHHHHHHHHHHH
Confidence 67765 3 56666642 35677788888887555533 24555544 4466798888744333345667899
Q ss_pred HHHcCCCcEEEeccCc
Q 014316 383 DMFGCGLPVCAVSYSC 398 (427)
Q Consensus 383 Eama~G~PVIas~~~g 398 (427)
+|....+|+++++.+-
T Consensus 234 ~a~~~kiPli~sd~~~ 249 (322)
T COG2984 234 VANKAKIPLIASDTSS 249 (322)
T ss_pred HHHHhCCCeecCCHHH
Confidence 9999999999998543
No 240
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=35.40 E-value=3.9e+02 Score=25.73 Aligned_cols=66 Identities=26% Similarity=0.297 Sum_probs=49.7
Q ss_pred HHHHHHHcCCC--c-EEEecCCCCcccHHHHHhcCcEEEeeccCCCCC-CCchHHHHHHcCCCcEEEeccC
Q 014316 331 YEEKIRRLRLK--R-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGL-DLPMKVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 331 ~~~~~~~l~l~--~-V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e-~~p~~~lEama~G~PVIas~~~ 397 (427)
..+.+.++++. + |-..|. ++.+.=..++.+.++-++-...|-.. ++.-|+-=|-..|+|||.-.-+
T Consensus 162 ~~~~~~~~~~p~~~Iia~~GP-fs~~~n~all~q~~id~vItK~SG~~Gg~~~Ki~aA~eLgi~VI~I~Rp 231 (257)
T COG2099 162 VLAKCEDLGVPPARIIAMRGP-FSEEDNKALLEQYRIDVVVTKNSGGAGGTYEKIEAARELGIPVIMIERP 231 (257)
T ss_pred HHHHHHhcCCChhhEEEecCC-cChHHHHHHHHHhCCCEEEEccCCcccCcHHHHHHHHHcCCcEEEEecC
Confidence 34566677773 4 667777 88888888888877766544444445 8888999999999999998776
No 241
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=34.54 E-value=1.2e+02 Score=31.38 Aligned_cols=46 Identities=15% Similarity=0.030 Sum_probs=28.3
Q ss_pred cHHHHHhcCcEEEeeccCCCCCCCchH----HHHHHcCCCcEEEec--cCcc
Q 014316 354 DYPLLLGSADLGVCLHTSSSGLDLPMK----VVDMFGCGLPVCAVS--YSCI 399 (427)
Q Consensus 354 ~~~~~l~~adi~v~p~~~s~~e~~p~~----~lEama~G~PVIas~--~~g~ 399 (427)
++...++.||+++.--.+...+..|.. ++-|..+|+|++... +|..
T Consensus 110 ~~~~~l~~aDlvI~gGG~lfqD~y~~~~~~y~l~A~l~gkpv~l~gqsiGPf 161 (426)
T PRK10017 110 DFVRLLSGYDAIIQVGGSFFVDLYGVPQFEHALCAFMAKKPLYMIGHSVGPF 161 (426)
T ss_pred HHHHHHHhCCEEEECCCCccccCcccHHHHHHHHHHHcCCCEEEECCcCCCc
Confidence 556679999999973211111222222 445678999999876 4544
No 242
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=34.44 E-value=1.4e+02 Score=30.50 Aligned_cols=85 Identities=12% Similarity=0.009 Sum_probs=58.9
Q ss_pred CCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecC-------CCCcccHHHHHhcCcEEEe--eccCC----CCCCCchH
Q 014316 314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTM-------WLSAEDYPLLLGSADLGVC--LHTSS----SGLDLPMK 380 (427)
Q Consensus 314 ~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~-------~~~~~~~~~~l~~adi~v~--p~~~s----~~e~~p~~ 380 (427)
..+-++-|+|-|.--..+.+.++.+|.+ |..... .....++.+++++||+.++ |.+.+ ..--+...
T Consensus 114 L~gktvGIIG~G~IG~~vA~~l~a~G~~-V~~~dp~~~~~~~~~~~~~L~ell~~sDiI~lh~PLt~~g~~~T~~li~~~ 192 (378)
T PRK15438 114 LHDRTVGIVGVGNVGRRLQARLEALGIK-TLLCDPPRADRGDEGDFRSLDELVQEADILTFHTPLFKDGPYKTLHLADEK 192 (378)
T ss_pred cCCCEEEEECcCHHHHHHHHHHHHCCCE-EEEECCcccccccccccCCHHHHHhhCCEEEEeCCCCCCcccccccccCHH
Confidence 4456889999997777777888888763 322221 0123468899999999984 43332 11235668
Q ss_pred HHHHHcCCCcEEEeccCcc
Q 014316 381 VVDMFGCGLPVCAVSYSCI 399 (427)
Q Consensus 381 ~lEama~G~PVIas~~~g~ 399 (427)
.++.|.-|.-+|-+.-|++
T Consensus 193 ~l~~mk~gailIN~aRG~v 211 (378)
T PRK15438 193 LIRSLKPGAILINACRGAV 211 (378)
T ss_pred HHhcCCCCcEEEECCCchh
Confidence 9999999999998887765
No 243
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=34.38 E-value=55 Score=29.15 Aligned_cols=37 Identities=22% Similarity=0.314 Sum_probs=26.1
Q ss_pred HhcCcEEEeecc---CCCCCCCchHHHHHHcCCCcEEEec
Q 014316 359 LGSADLGVCLHT---SSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 359 l~~adi~v~p~~---~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
-..+|++|+--- -..+.||--.+.||++.|+||+++-
T Consensus 91 ~~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~V 130 (159)
T PF10649_consen 91 AEGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTAV 130 (159)
T ss_pred hcCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEEE
Confidence 344899887210 1234567778999999999999874
No 244
>PRK13243 glyoxylate reductase; Reviewed
Probab=34.35 E-value=1.2e+02 Score=30.27 Aligned_cols=84 Identities=8% Similarity=0.001 Sum_probs=55.4
Q ss_pred CCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCC----------CCcccHHHHHhcCcEEEeeccCCC--CCCCchHHH
Q 014316 315 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMW----------LSAEDYPLLLGSADLGVCLHTSSS--GLDLPMKVV 382 (427)
Q Consensus 315 ~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~----------~~~~~~~~~l~~adi~v~p~~~s~--~e~~p~~~l 382 (427)
..-++-|+|-|.--..+.+.++.+|. +|...... ....++.+++++||++++....+. ..-+.-..+
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP~t~~T~~~i~~~~~ 227 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKPEAEKELGAEYRPLEELLRESDFVSLHVPLTKETYHMINEERL 227 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCChhhHHHcCCEecCHHHHHhhCCEEEEeCCCChHHhhccCHHHH
Confidence 35678999999766677777777765 34443320 122367889999999987221111 244556789
Q ss_pred HHHcCCCcEEEeccCcc
Q 014316 383 DMFGCGLPVCAVSYSCI 399 (427)
Q Consensus 383 Eama~G~PVIas~~~g~ 399 (427)
++|--|.-+|-+..|++
T Consensus 228 ~~mk~ga~lIN~aRg~~ 244 (333)
T PRK13243 228 KLMKPTAILVNTARGKV 244 (333)
T ss_pred hcCCCCeEEEECcCchh
Confidence 99988888887776664
No 245
>TIGR00639 PurN phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent. In phylogenetic analyses, the member from Saccharomyces cerevisiae shows a long branch length but membership in the family, while the formyltetrahydrofolate deformylases form a closely related outgroup.
Probab=34.01 E-value=2.9e+02 Score=25.17 Aligned_cols=53 Identities=13% Similarity=0.097 Sum_probs=27.8
Q ss_pred eEEEEEeCCCCCChhHHHHHHHHHhhCCC--cEEEEecCC-CCCcccccCCCceEEEEee
Q 014316 6 RACVVVLGDLGRSPRMQYQALSLARQMSL--EVDVVAYGG-SKPHAAILEHPSIHIHTMT 62 (427)
Q Consensus 6 ~~~v~~~~~~~~~~r~~~~a~~La~~~g~--~V~vi~~~~-~~~~~~~~~~~~i~v~~~~ 62 (427)
|++|+..|.- ..+...+.++.++ ++ +|.++.... +-...+.....||+++.+.
T Consensus 2 riail~sg~g---s~~~~ll~~~~~~-~l~~~I~~vi~~~~~~~~~~~A~~~gip~~~~~ 57 (190)
T TIGR00639 2 RIVVLISGNG---SNLQAIIDACKEG-KIPASVVLVISNKPDAYGLERAAQAGIPTFVLS 57 (190)
T ss_pred eEEEEEcCCC---hhHHHHHHHHHcC-CCCceEEEEEECCccchHHHHHHHcCCCEEEEC
Confidence 4666665422 2344444555554 44 555544443 2222344556699888765
No 246
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=33.44 E-value=2e+02 Score=26.47 Aligned_cols=23 Identities=30% Similarity=0.307 Sum_probs=16.9
Q ss_pred EEEeCCCCCChhHHHHHHHHHhh
Q 014316 9 VVVLGDLGRSPRMQYQALSLARQ 31 (427)
Q Consensus 9 v~~~~~~~~~~r~~~~a~~La~~ 31 (427)
.+++|..|..+-|.+...+|.+.
T Consensus 42 lVvlGSGGHT~EMlrLl~~l~~~ 64 (211)
T KOG3339|consen 42 LVVLGSGGHTGEMLRLLEALQDL 64 (211)
T ss_pred EEEEcCCCcHHHHHHHHHHHHhh
Confidence 44677777777788888888665
No 247
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=32.81 E-value=1.4e+02 Score=29.70 Aligned_cols=84 Identities=10% Similarity=0.029 Sum_probs=55.3
Q ss_pred CCEEEEEEeCCCChHHHHHHHH-HcCCCcEEEecCCC----------CcccHHHHHhcCcEEEe--eccCCCCCCCchHH
Q 014316 315 PRLLFIITGKGPDKESYEEKIR-RLRLKRVAFRTMWL----------SAEDYPLLLGSADLGVC--LHTSSSGLDLPMKV 381 (427)
Q Consensus 315 ~~~~l~i~G~G~~~~~~~~~~~-~l~l~~V~f~g~~~----------~~~~~~~~l~~adi~v~--p~~~s~~e~~p~~~ 381 (427)
..-++-|+|-|.--..+.+.++ .+|. +|.+..... ...++.+++++||++++ |.+.....-+.-..
T Consensus 144 ~gktvGIiG~G~IG~~va~~l~~~fgm-~V~~~~~~~~~~~~~~~~~~~~~l~ell~~sDvv~lh~plt~~T~~li~~~~ 222 (323)
T PRK15409 144 HHKTLGIVGMGRIGMALAQRAHFGFNM-PILYNARRHHKEAEERFNARYCDLDTLLQESDFVCIILPLTDETHHLFGAEQ 222 (323)
T ss_pred CCCEEEEEcccHHHHHHHHHHHhcCCC-EEEEECCCCchhhHHhcCcEecCHHHHHHhCCEEEEeCCCChHHhhccCHHH
Confidence 3567889999876566666665 5554 455443211 12367889999999976 22222224566789
Q ss_pred HHHHcCCCcEEEeccCcc
Q 014316 382 VDMFGCGLPVCAVSYSCI 399 (427)
Q Consensus 382 lEama~G~PVIas~~~g~ 399 (427)
++.|--|.-+|-+.-|++
T Consensus 223 l~~mk~ga~lIN~aRG~v 240 (323)
T PRK15409 223 FAKMKSSAIFINAGRGPV 240 (323)
T ss_pred HhcCCCCeEEEECCCccc
Confidence 999999988888877765
No 248
>PRK10494 hypothetical protein; Provisional
Probab=32.78 E-value=1.9e+02 Score=27.79 Aligned_cols=78 Identities=17% Similarity=0.180 Sum_probs=49.1
Q ss_pred CCCEEEEEEeCCC------ChHHHHHHHHHcCCC--cEEEecCCCCcc------cHHHHHhcCcEEEeeccCCCCCCCch
Q 014316 314 YPRLLFIITGKGP------DKESYEEKIRRLRLK--RVAFRTMWLSAE------DYPLLLGSADLGVCLHTSSSGLDLPM 379 (427)
Q Consensus 314 ~~~~~l~i~G~G~------~~~~~~~~~~~l~l~--~V~f~g~~~~~~------~~~~~l~~adi~v~p~~~s~~e~~p~ 379 (427)
.+..++++.|... +.+-.++.+.++|+. ++..-+. +.+ ...+++....+.++ ++....+.
T Consensus 119 ~~~~~ii~SGg~~~~~~~sEA~~~~~~l~~lGVp~~~Ii~e~~--s~nT~eNa~~~~~~~~~~~iiLV----Tsa~Hm~R 192 (259)
T PRK10494 119 NPGAKLIFTGGAAKTNTVSTAEVGARVAQSLGVPREDIITLDL--PKDTEEEAAAVKQAIGDAPFLLV----TSASHLPR 192 (259)
T ss_pred CCCCEEEEECCCCCCCCCCHHHHHHHHHHHcCCCHHHeeeCCC--CCCHHHHHHHHHHHhCCCCEEEE----CCHHHHHH
Confidence 5677888888531 123456677888995 3655442 322 33445555556665 33334788
Q ss_pred HHHHHHcCCCcEEEeccC
Q 014316 380 KVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 380 ~~lEama~G~PVIas~~~ 397 (427)
++..+-..|+.++...++
T Consensus 193 A~~~f~~~Gl~v~p~Ptd 210 (259)
T PRK10494 193 AMIFFQQEGLNPLPAPAN 210 (259)
T ss_pred HHHHHHHcCCceeecCCc
Confidence 888888899999977654
No 249
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=32.17 E-value=3.2e+02 Score=26.71 Aligned_cols=39 Identities=15% Similarity=0.140 Sum_probs=26.6
Q ss_pred cHHHHHh--cCcEEEeeccCCCCCCCchHHHHHHc--CCCcEEEe
Q 014316 354 DYPLLLG--SADLGVCLHTSSSGLDLPMKVVDMFG--CGLPVCAV 394 (427)
Q Consensus 354 ~~~~~l~--~adi~v~p~~~s~~e~~p~~~lEama--~G~PVIas 394 (427)
++.+.++ .+|+++=. |...--|.-.+++.|+ +..|+|-.
T Consensus 96 ~L~e~i~~v~ptvlIG~--S~~~g~ft~evv~~Ma~~~~~PIIFa 138 (279)
T cd05312 96 SLLEVVKAVKPTVLIGL--SGVGGAFTEEVVRAMAKSNERPIIFA 138 (279)
T ss_pred CHHHHHHhcCCCEEEEe--CCCCCCCCHHHHHHHHhcCCCCEEEE
Confidence 4666666 77888864 2223467788899998 46787743
No 250
>cd05565 PTS_IIB_lactose PTS_IIB_lactose: subunit IIB of enzyme II (EII) of the lactose-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS) found in Firmicutes as well as Actinobacteria. In this system, EII is a lactose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. The IIC and IIB domains are expressed as a single protein from the lac operon. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include lactose, chitobiose/lichenan, ascorbate, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.
Probab=31.68 E-value=1.2e+02 Score=24.64 Aligned_cols=72 Identities=7% Similarity=0.015 Sum_probs=43.5
Q ss_pred EEEEeCCCCh----HHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe
Q 014316 319 FIITGKGPDK----ESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 394 (427)
Q Consensus 319 l~i~G~G~~~----~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas 394 (427)
++++|.|-.. +.+++.+++.|++ +.+.- .+..++......+|+.++-+ -...-+...-=.+-..|+||...
T Consensus 4 ll~C~~GaSSs~la~km~~~a~~~gi~-~~i~a--~~~~e~~~~~~~~Dvill~P--Qv~~~~~~i~~~~~~~~ipv~~I 78 (99)
T cd05565 4 LVLCAGGGTSGLLANALNKGAKERGVP-LEAAA--GAYGSHYDMIPDYDLVILAP--QMASYYDELKKDTDRLGIKLVTT 78 (99)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHCCCc-EEEEE--eeHHHHHHhccCCCEEEEcC--hHHHHHHHHHHHhhhcCCCEEEe
Confidence 5666777443 4567788888875 33333 35788899999999888621 11112221122233457899876
Q ss_pred c
Q 014316 395 S 395 (427)
Q Consensus 395 ~ 395 (427)
+
T Consensus 79 ~ 79 (99)
T cd05565 79 T 79 (99)
T ss_pred C
Confidence 5
No 251
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=31.06 E-value=4.5e+02 Score=27.25 Aligned_cols=104 Identities=16% Similarity=0.127 Sum_probs=65.5
Q ss_pred ccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHH
Q 014316 252 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 331 (427)
Q Consensus 252 ~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~ 331 (427)
...+..|.+-+...+..+-.-..-|++++ +++ +|++.++++-.-+...
T Consensus 44 ~~~~~~p~vWiHaaSVGEv~a~~pLv~~l---~~~---------------------------~P~~~ilvTt~T~Tg~-- 91 (419)
T COG1519 44 PVKPEGPLVWIHAASVGEVLAALPLVRAL---RER---------------------------FPDLRILVTTMTPTGA-- 91 (419)
T ss_pred CCCCCCCeEEEEecchhHHHHHHHHHHHH---HHh---------------------------CCCCCEEEEecCccHH--
Confidence 34555676777777777654444444444 444 8999887776444322
Q ss_pred HHHHHHcCCC-cEEEecCCCCcccHH---HH--HhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 332 EEKIRRLRLK-RVAFRTMWLSAEDYP---LL--LGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 332 ~~~~~~l~l~-~V~f~g~~~~~~~~~---~~--l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
+...+.++-. .+.++ |.|... .+ ..+-|++|+ .+.|-.|+.+.|+-..|+|++-.+
T Consensus 92 e~a~~~~~~~v~h~Yl----P~D~~~~v~rFl~~~~P~l~Ii----~EtElWPnli~e~~~~~~p~~LvN 153 (419)
T COG1519 92 ERAAALFGDSVIHQYL----PLDLPIAVRRFLRKWRPKLLII----METELWPNLINELKRRGIPLVLVN 153 (419)
T ss_pred HHHHHHcCCCeEEEec----CcCchHHHHHHHHhcCCCEEEE----EeccccHHHHHHHHHcCCCEEEEe
Confidence 3333444432 34443 344332 22 457788887 788889999999999999998765
No 252
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=31.04 E-value=3.4e+02 Score=25.52 Aligned_cols=53 Identities=13% Similarity=0.157 Sum_probs=41.6
Q ss_pred CCEEEEEEeCCCChHHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEee
Q 014316 315 PRLLFIITGKGPDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCL 368 (427)
Q Consensus 315 ~~~~l~i~G~G~~~~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p 368 (427)
+++-.+-+-..+...+.-++++++|.+ .|.|-.. -|.+.+..++...|+.++-
T Consensus 85 ad~It~H~E~~~~~~r~i~~Ik~~G~kaGv~lnP~-Tp~~~i~~~l~~vD~VllM 138 (220)
T COG0036 85 ADIITFHAEATEHIHRTIQLIKELGVKAGLVLNPA-TPLEALEPVLDDVDLVLLM 138 (220)
T ss_pred CCEEEEEeccCcCHHHHHHHHHHcCCeEEEEECCC-CCHHHHHHHHhhCCEEEEE
Confidence 444333333677778888999999997 6888777 8899999999999999774
No 253
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=30.92 E-value=2.5e+02 Score=25.72 Aligned_cols=83 Identities=16% Similarity=0.057 Sum_probs=51.6
Q ss_pred CEEEEEEeC--CC---ChHHHHHHHHHcCCCcEEEecC-CCCcccHHHHHhcCcEEEeeccCCC------CC-CCchHHH
Q 014316 316 RLLFIITGK--GP---DKESYEEKIRRLRLKRVAFRTM-WLSAEDYPLLLGSADLGVCLHTSSS------GL-DLPMKVV 382 (427)
Q Consensus 316 ~~~l~i~G~--G~---~~~~~~~~~~~l~l~~V~f~g~-~~~~~~~~~~l~~adi~v~p~~~s~------~e-~~p~~~l 382 (427)
+.++.++.. ++ ..+.+.+..+++|.+.+.+.-. -.+.+++.+.+..||+.+++=.... .+ ++--.+.
T Consensus 29 ~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~l~~ad~I~~~GG~~~~~~~~l~~t~~~~~i~ 108 (210)
T cd03129 29 GARVLFIPTASGDRDEYGEEYRAAFERLGVEVVHLLLIDTANDPDVVARLLEADGIFVGGGNQLRLLSVLRETPLLDAIL 108 (210)
T ss_pred CCeEEEEeCCCCChHHHHHHHHHHHHHcCCceEEEeccCCCCCHHHHHHHhhCCEEEEcCCcHHHHHHHHHhCChHHHHH
Confidence 344555553 32 2345666777888865544331 0135788899999999998421111 12 2444688
Q ss_pred HHHcCCCcEEEeccCc
Q 014316 383 DMFGCGLPVCAVSYSC 398 (427)
Q Consensus 383 Eama~G~PVIas~~~g 398 (427)
+....|+|++.++.|.
T Consensus 109 ~~~~~G~v~~G~SAGA 124 (210)
T cd03129 109 KRVARGVVIGGTSAGA 124 (210)
T ss_pred HHHHcCCeEEEcCHHH
Confidence 8888999999988554
No 254
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=30.74 E-value=5e+02 Score=25.04 Aligned_cols=125 Identities=12% Similarity=0.131 Sum_probs=78.6
Q ss_pred CCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCC--ChHHHHHH
Q 014316 257 RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEK 334 (427)
Q Consensus 257 ~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~--~~~~~~~~ 334 (427)
.|+++..-.+..-..|++.+++.++.. .+.-+++=|=| +.+++.+.
T Consensus 92 ~p~vlm~Y~N~i~~~G~e~F~~~~~~a--------------------------------GvdgviipDLP~ee~~~~~~~ 139 (263)
T CHL00200 92 APIVIFTYYNPVLHYGINKFIKKISQA--------------------------------GVKGLIIPDLPYEESDYLISV 139 (263)
T ss_pred CCEEEEecccHHHHhCHHHHHHHHHHc--------------------------------CCeEEEecCCCHHHHHHHHHH
Confidence 454443334444567999888887763 34444444433 33567788
Q ss_pred HHHcCCCcEEEecCCCCcccHHHHHhcCcEEEee-ccCC-CC--CCCchHHHHHH-----cCCCcEEEeccC-----ccc
Q 014316 335 IRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCL-HTSS-SG--LDLPMKVVDMF-----GCGLPVCAVSYS-----CIE 400 (427)
Q Consensus 335 ~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p-~~~s-~~--e~~p~~~lEam-----a~G~PVIas~~~-----g~~ 400 (427)
+++.|++.|.+...--+.+.+..+.+.++=+|.. .... .+ ..++..+-|.. ..++|++. ..| .+.
T Consensus 140 ~~~~gi~~I~lv~PtT~~eri~~i~~~a~gFIY~vS~~GvTG~~~~~~~~~~~~i~~ir~~t~~Pi~v-GFGI~~~e~~~ 218 (263)
T CHL00200 140 CNLYNIELILLIAPTSSKSRIQKIARAAPGCIYLVSTTGVTGLKTELDKKLKKLIETIKKMTNKPIIL-GFGISTSEQIK 218 (263)
T ss_pred HHHcCCCEEEEECCCCCHHHHHHHHHhCCCcEEEEcCCCCCCCCccccHHHHHHHHHHHHhcCCCEEE-ECCcCCHHHHH
Confidence 8999999888888734567888999999944432 1111 11 35566667766 67889987 322 233
Q ss_pred cceecCCcEEEeCC
Q 014316 401 ELVKVDKNGLLFSS 414 (427)
Q Consensus 401 e~v~~~~~G~l~~~ 414 (427)
++...|-+|+++++
T Consensus 219 ~~~~~GADGvVVGS 232 (263)
T CHL00200 219 QIKGWNINGIVIGS 232 (263)
T ss_pred HHHhcCCCEEEECH
Confidence 44555689999965
No 255
>PRK13010 purU formyltetrahydrofolate deformylase; Reviewed
Probab=30.69 E-value=2.9e+02 Score=27.12 Aligned_cols=56 Identities=7% Similarity=0.069 Sum_probs=30.9
Q ss_pred CcceEEEEEeCCCCCChhHHHHHHHHHhh-CCCcEEEEecCCCCCcccccCCCceEEEEee
Q 014316 3 RRGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62 (427)
Q Consensus 3 ~~~~~~v~~~~~~~~~~r~~~~a~~La~~-~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~ 62 (427)
++++++|++.+.. ..++....+.... ...+|.++...... ..+.....||+++.++
T Consensus 92 ~~~kiavl~Sg~g---~nl~al~~~~~~~~l~~~i~~visn~~~-~~~~A~~~gIp~~~~~ 148 (289)
T PRK13010 92 QRPKVVIMVSKFD---HCLNDLLYRWRMGELDMDIVGIISNHPD-LQPLAVQHDIPFHHLP 148 (289)
T ss_pred CCeEEEEEEeCCC---ccHHHHHHHHHCCCCCcEEEEEEECChh-HHHHHHHcCCCEEEeC
Confidence 4567888777743 2344444444433 12355544443332 2355566799999987
No 256
>PRK06849 hypothetical protein; Provisional
Probab=30.39 E-value=5.8e+02 Score=25.68 Aligned_cols=38 Identities=13% Similarity=0.025 Sum_probs=25.9
Q ss_pred CCCcceEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCC
Q 014316 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGG 43 (427)
Q Consensus 1 ~~~~~~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~ 43 (427)
|+.++++.|+- ++.+.....+.+|.+. ||+|.++....
T Consensus 1 ~~~~~~VLI~G----~~~~~~l~iar~l~~~-G~~Vi~~d~~~ 38 (389)
T PRK06849 1 MNTKKTVLITG----ARAPAALELARLFHNA-GHTVILADSLK 38 (389)
T ss_pred CCCCCEEEEeC----CCcHHHHHHHHHHHHC-CCEEEEEeCCc
Confidence 66677766642 2333456677888886 99999997654
No 257
>PRK13789 phosphoribosylamine--glycine ligase; Provisional
Probab=30.31 E-value=6.3e+02 Score=26.09 Aligned_cols=38 Identities=18% Similarity=0.320 Sum_probs=22.3
Q ss_pred CCCcceEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCC
Q 014316 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGS 44 (427)
Q Consensus 1 ~~~~~~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~ 44 (427)
|.++++++| +| ..+|-.-.+.+|.+. ++-+.+++..+.
T Consensus 1 ~~~~~kvLv--iG---~g~rehal~~~~~~~-~~~~~~~~~pgn 38 (426)
T PRK13789 1 MQVKLKVLL--IG---SGGRESAIAFALRKS-NLLSELKVFPGN 38 (426)
T ss_pred CCCCcEEEE--EC---CCHHHHHHHHHHHhC-CCCCEEEEECCc
Confidence 666555555 33 225555556677774 766677775543
No 258
>PRK00676 hemA glutamyl-tRNA reductase; Validated
Probab=30.26 E-value=2.6e+02 Score=28.18 Aligned_cols=88 Identities=10% Similarity=0.053 Sum_probs=52.6
Q ss_pred CCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCC---CCcccHH----HHHhcCcEEEeeccCCCCCCCchHHHHHHc
Q 014316 314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMW---LSAEDYP----LLLGSADLGVCLHTSSSGLDLPMKVVDMFG 386 (427)
Q Consensus 314 ~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~---~~~~~~~----~~l~~adi~v~p~~~s~~e~~p~~~lEama 386 (427)
..+-++.++|.|...+..-+...+.|..+|.+...- .+.++.. .+...+|+.++. +++..-..|....|.+.
T Consensus 172 l~~k~vLvIGaGem~~l~a~~L~~~g~~~i~v~nRt~~~~~~~~~~~~~~~~~~~~DvVIs~-t~~Tas~~p~i~~~~~~ 250 (338)
T PRK00676 172 SKKASLLFIGYSEINRKVAYYLQRQGYSRITFCSRQQLTLPYRTVVREELSFQDPYDVIFFG-SSESAYAFPHLSWESLA 250 (338)
T ss_pred ccCCEEEEEcccHHHHHHHHHHHHcCCCEEEEEcCCccccchhhhhhhhhhcccCCCEEEEc-CCcCCCCCceeeHHHHh
Confidence 446789999999876666666666777777776641 1234443 667899999973 11123345666666655
Q ss_pred CCCcEEEeccCccccc
Q 014316 387 CGLPVCAVSYSCIEEL 402 (427)
Q Consensus 387 ~G~PVIas~~~g~~e~ 402 (427)
.-.+-+--|.+-.+++
T Consensus 251 ~~~~r~~iDLAvPRdI 266 (338)
T PRK00676 251 DIPDRIVFDFNVPRTF 266 (338)
T ss_pred hccCcEEEEecCCCCC
Confidence 3222344555544443
No 259
>TIGR00655 PurU formyltetrahydrofolate deformylase. This model describes formyltetrahydrofolate deformylases. The enzyme is a homohexamer. Sequences from a related enzyme formyl tetrahydrofolate-specific enzyme, phosphoribosylglycinamide formyltransferase, serve as an outgroup for phylogenetic analysis. Putative members of this family, scoring below the trusted cutoff, include a sequence from Rhodobacter capsulatus that lacks an otherwise conserved C-terminal region.
Probab=30.24 E-value=3.7e+02 Score=26.20 Aligned_cols=56 Identities=13% Similarity=0.131 Sum_probs=30.2
Q ss_pred CcceEEEEEeCCCCCChhHHHHHHHHHhh-CCCcEEEEecCCCCCcccccCCCceEEEEee
Q 014316 3 RRGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62 (427)
Q Consensus 3 ~~~~~~v~~~~~~~~~~r~~~~a~~La~~-~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~ 62 (427)
++++++|++.+.. ..++....+.... ...+|.++...... .....++.||+++.++
T Consensus 83 ~~~ki~vl~Sg~g---~nl~~l~~~~~~g~l~~~i~~visn~~~-~~~~A~~~gIp~~~~~ 139 (280)
T TIGR00655 83 KLKRVAILVSKED---HCLGDLLWRWYSGELDAEIALVISNHED-LRSLVERFGIPFHYIP 139 (280)
T ss_pred CCcEEEEEEcCCC---hhHHHHHHHHHcCCCCcEEEEEEEcChh-HHHHHHHhCCCEEEcC
Confidence 4677888777742 2334333443332 12355555433322 2334566799999887
No 260
>PLN02331 phosphoribosylglycinamide formyltransferase
Probab=30.11 E-value=3.2e+02 Score=25.32 Aligned_cols=53 Identities=15% Similarity=-0.036 Sum_probs=25.8
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHhh--CCCcEEEEecCCCCCcccccCCCceEEEEee
Q 014316 7 ACVVVLGDLGRSPRMQYQALSLARQ--MSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62 (427)
Q Consensus 7 ~~v~~~~~~~~~~r~~~~a~~La~~--~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~ 62 (427)
++|++.|.. ..++....+..+. .+.-+.|++...+-...+.....||+++.++
T Consensus 2 i~vl~Sg~G---sn~~al~~~~~~~~l~~~i~~visn~~~~~~~~~A~~~gIp~~~~~ 56 (207)
T PLN02331 2 LAVFVSGGG---SNFRAIHDACLDGRVNGDVVVVVTNKPGCGGAEYARENGIPVLVYP 56 (207)
T ss_pred EEEEEeCCC---hhHHHHHHHHHcCCCCeEEEEEEEeCCCChHHHHHHHhCCCEEEec
Confidence 556555533 2344333444443 1233444444333222344556699988876
No 261
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=29.77 E-value=5.7e+02 Score=26.54 Aligned_cols=77 Identities=17% Similarity=0.113 Sum_probs=51.3
Q ss_pred EEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHH-cCCCcEEEec
Q 014316 317 LLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMF-GCGLPVCAVS 395 (427)
Q Consensus 317 ~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEam-a~G~PVIas~ 395 (427)
-.++|++.- .+..++++++++ +..++.+++..++..+|++++. +++...-++...+|.- ..-...+..|
T Consensus 203 ~~i~IaNRT--~erA~~La~~~~-------~~~~~l~el~~~l~~~DvViss-Tsa~~~ii~~~~ve~a~~~r~~~livD 272 (414)
T COG0373 203 KKITIANRT--LERAEELAKKLG-------AEAVALEELLEALAEADVVISS-TSAPHPIITREMVERALKIRKRLLIVD 272 (414)
T ss_pred CEEEEEcCC--HHHHHHHHHHhC-------CeeecHHHHHHhhhhCCEEEEe-cCCCccccCHHHHHHHHhcccCeEEEE
Confidence 456777753 567788888887 2226689999999999999983 3444445555555544 3333457778
Q ss_pred cCccccce
Q 014316 396 YSCIEELV 403 (427)
Q Consensus 396 ~~g~~e~v 403 (427)
.+-.+++=
T Consensus 273 iavPRdie 280 (414)
T COG0373 273 IAVPRDVE 280 (414)
T ss_pred ecCCCCCC
Confidence 77777654
No 262
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=29.64 E-value=2.8e+02 Score=28.55 Aligned_cols=88 Identities=14% Similarity=0.116 Sum_probs=51.5
Q ss_pred CCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecC---------------CCCcccHHHHHhcCcEEEeeccCCCCCCCc
Q 014316 314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTM---------------WLSAEDYPLLLGSADLGVCLHTSSSGLDLP 378 (427)
Q Consensus 314 ~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~---------------~~~~~~~~~~l~~adi~v~p~~~s~~e~~p 378 (427)
.++-++.|+|.|+.-...-......|..+|...+. .++.+++.+.+..+|+++.. +++..--+.
T Consensus 178 l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i~~~~l~~~l~~aDvVi~a-T~s~~~ii~ 256 (417)
T TIGR01035 178 LKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAVKFEDLEEYLAEADIVISS-TGAPHPIVS 256 (417)
T ss_pred ccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEeeHHHHHHHHhhCCEEEEC-CCCCCceEc
Confidence 34567889999876554444455556555544432 02234566778899999984 222222244
Q ss_pred hHHHHHHcCC--CcEEEeccCccccc
Q 014316 379 MKVVDMFGCG--LPVCAVSYSCIEEL 402 (427)
Q Consensus 379 ~~~lEama~G--~PVIas~~~g~~e~ 402 (427)
...++.+..+ .|.+..|.+..+++
T Consensus 257 ~e~l~~~~~~~~~~~~viDla~Prdi 282 (417)
T TIGR01035 257 KEDVERALRERTRPLFIIDIAVPRDV 282 (417)
T ss_pred HHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 4556665443 57777777765554
No 263
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=29.54 E-value=1.5e+02 Score=28.40 Aligned_cols=80 Identities=20% Similarity=0.158 Sum_probs=54.2
Q ss_pred HcCCC--c-EEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEeC
Q 014316 337 RLRLK--R-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS 413 (427)
Q Consensus 337 ~l~l~--~-V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~~ 413 (427)
.+|+. + +...|. .+.+.=.+++++..+-++....|-..++..|+-=|..+|+|||.-.-+..++-. -.++
T Consensus 166 ~~g~~~~~iia~~GP-fs~e~n~al~~~~~i~~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~~~~~------~~~~ 238 (249)
T PF02571_consen 166 ALGFPPKNIIAMQGP-FSKELNRALFRQYGIDVLVTKESGGSGFDEKIEAARELGIPVIVIKRPPEPYGD------PVVE 238 (249)
T ss_pred cCCCChhhEEEEeCC-CCHHHHHHHHHHcCCCEEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCCCCCC------cccC
Confidence 55653 4 556665 777766777776555544344444468999999999999999998877665322 1257
Q ss_pred ChHHHHHHHH
Q 014316 414 SSSELADQLL 423 (427)
Q Consensus 414 ~~~~la~~l~ 423 (427)
+.+++-+.|+
T Consensus 239 ~~~e~l~~l~ 248 (249)
T PF02571_consen 239 TIEELLDWLE 248 (249)
T ss_pred CHHHHHHHHh
Confidence 7777776654
No 264
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=28.83 E-value=3.1e+02 Score=30.64 Aligned_cols=139 Identities=12% Similarity=0.070 Sum_probs=87.9
Q ss_pred CCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCC---CCh--HHH
Q 014316 257 RPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG---PDK--ESY 331 (427)
Q Consensus 257 ~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G---~~~--~~~ 331 (427)
+..+++.+-++..-||...=+.|+.++.+++... ..++.++.+..+ +.+ +++
T Consensus 275 g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~-----------------------~~kVvliqi~~~~~~~~~~v~~~ 331 (732)
T KOG1050|consen 275 GKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEW-----------------------IDKVVLIQIENPKRTDGKEVEEL 331 (732)
T ss_pred CCceEecccccccccCchHHHHHHHHHHHhChhh-----------------------hceEEEEEEecCCcccchHHHHH
Confidence 3458888999999999988888888887762111 234555554432 221 122
Q ss_pred H----HHHHHc----CC---CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCC----CcEEEecc
Q 014316 332 E----EKIRRL----RL---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCG----LPVCAVSY 396 (427)
Q Consensus 332 ~----~~~~~l----~l---~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G----~PVIas~~ 396 (427)
+ ..+++. +- +.|.++-.-++..++-+++..+|+++.. +.++|-.++.+|+.+|. .+.|.+..
T Consensus 332 k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~---s~rdGmnl~~~e~i~~~~~~~~~lVlsef 408 (732)
T KOG1050|consen 332 KFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVT---SWRDGMNLVFLEYILCQENKKSVLVLSEF 408 (732)
T ss_pred HHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeec---ccccccchhhhHHHHhhcccCCceEEeee
Confidence 2 222221 11 2355555448899999999999999874 77788888999999885 56777776
Q ss_pred CccccceecCCcEEEe--CChHHHHHHHH
Q 014316 397 SCIEELVKVDKNGLLF--SSSSELADQLL 423 (427)
Q Consensus 397 ~g~~e~v~~~~~G~l~--~~~~~la~~l~ 423 (427)
-|..+.++++ -.++ -+.++++..+.
T Consensus 409 ~G~~~tl~d~--aivvnpw~~~~~~~~i~ 435 (732)
T KOG1050|consen 409 IGDDTTLEDA--AIVVNPWDGDEFAILIS 435 (732)
T ss_pred cccccccccc--CEEECCcchHHHHHHHH
Confidence 6666665332 2233 23456665554
No 265
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=28.77 E-value=2.8e+02 Score=25.59 Aligned_cols=82 Identities=7% Similarity=-0.001 Sum_probs=48.0
Q ss_pred EEEEEEeCCCC-hHHHHHHHHHcCCC--cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEE
Q 014316 317 LLFIITGKGPD-KESYEEKIRRLRLK--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA 393 (427)
Q Consensus 317 ~~l~i~G~G~~-~~~~~~~~~~l~l~--~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIa 393 (427)
-.++++|.-+. ...+++.++..|.. +=+|+|+-+..-.. .-+..=|+.++. ....+. ..+-||...|+|+|+
T Consensus 62 ~~ILfVgtk~~~~~~V~~~A~~~g~~~v~~RWlgGtLTN~~~-~~~~~Pdlliv~--dp~~~~--~Av~EA~~l~IP~Ia 136 (196)
T TIGR01012 62 EDILVVSARIYGQKPVLKFAKVTGARAIAGRFTPGTFTNPMQ-KAFREPEVVVVT--DPRADH--QALKEASEVGIPIVA 136 (196)
T ss_pred CeEEEEecCHHHHHHHHHHHHHhCCceECCeeCCCCCCCccc-cccCCCCEEEEE--CCcccc--HHHHHHHHcCCCEEE
Confidence 46888886543 34456666666542 34677763332221 224556677663 223333 489999999999998
Q ss_pred ec-cCccccce
Q 014316 394 VS-YSCIEELV 403 (427)
Q Consensus 394 s~-~~g~~e~v 403 (427)
-- .-+-+..|
T Consensus 137 i~DTn~dp~~v 147 (196)
T TIGR01012 137 LCDTDNPLRYV 147 (196)
T ss_pred EeeCCCCCccC
Confidence 63 44444444
No 266
>COG2875 CobM Precorrin-4 methylase [Coenzyme metabolism]
Probab=28.38 E-value=1.9e+02 Score=27.58 Aligned_cols=61 Identities=18% Similarity=0.292 Sum_probs=34.4
Q ss_pred EEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEecc
Q 014316 317 LLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 396 (427)
Q Consensus 317 ~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~ 396 (427)
.++.|+|.||-.+++ ++..| ..++++||+++.. .+- .|-.++|+-.-+.=++.|..
T Consensus 3 ~~VyFIGAGPGdpdL-----------iTvkg--------~~ll~~advviYA---GSL--V~~elL~~~~~~aei~nSa~ 58 (254)
T COG2875 3 MKVYFIGAGPGDPDL-----------ITVKG--------QRLLEKADVVIYA---GSL--VPPELLEYCRPDAEIVNSAS 58 (254)
T ss_pred ceEEEEccCCCCcce-----------eeehH--------HHHHhhCCEEEEC---CCc--CCHHHHhhcCCCCEEEecCc
Confidence 356788888754432 34444 3566777776653 222 45566666666666666654
Q ss_pred Ccccc
Q 014316 397 SCIEE 401 (427)
Q Consensus 397 ~g~~e 401 (427)
=.+.|
T Consensus 59 ~tLee 63 (254)
T COG2875 59 LTLEE 63 (254)
T ss_pred CCHHH
Confidence 33333
No 267
>TIGR03029 EpsG chain length determinant protein tyrosine kinase EpsG. The proteins in this family are homologs of the EpsG protein found in Methylobacillus strain 12S and are generally found in operons with other Eps homologs. The protein is believed to function as the protein tyrosine kinase component of the chain length regulator (along with the transmembrane component EpsF).
Probab=28.37 E-value=5.1e+02 Score=24.53 Aligned_cols=21 Identities=5% Similarity=-0.027 Sum_probs=16.2
Q ss_pred hHHHHHHHHHhhCCCcEEEEec
Q 014316 20 RMQYQALSLARQMSLEVDVVAY 41 (427)
Q Consensus 20 r~~~~a~~La~~~g~~V~vi~~ 41 (427)
-..+.|.++++. |+.|.+|-.
T Consensus 120 ~a~nLA~~la~~-g~~VllID~ 140 (274)
T TIGR03029 120 IAANLAIVFSQL-GEKTLLIDA 140 (274)
T ss_pred HHHHHHHHHHhc-CCeEEEEeC
Confidence 356677888885 999999953
No 268
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=28.35 E-value=1.7e+02 Score=27.96 Aligned_cols=76 Identities=22% Similarity=0.222 Sum_probs=51.4
Q ss_pred EEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEeCChHHHHHHH
Q 014316 343 VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELADQL 422 (427)
Q Consensus 343 V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~~~~~~la~~l 422 (427)
+...|. .+.+.=.+++++.++-++....|-..|+.-|+-=|+.+|+|||.-.-+..+. . ...+.+.+++-+.+
T Consensus 171 iam~gP-fs~e~n~aL~~~~~i~~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~~~-----~-~~~~~~~~e~~~~l 243 (248)
T PRK08057 171 IALRGP-FSLELERALLRQHRIDVVVTKNSGGAGTEAKLEAARELGIPVVMIARPALPY-----A-DREFEDVAELVAWL 243 (248)
T ss_pred EEeeCC-CCHHHHHHHHHHcCCCEEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCCCC-----C-CcccCCHHHHHHHH
Confidence 555565 6666666777766665554444433588899999999999999988775421 1 13457878877777
Q ss_pred HHh
Q 014316 423 LVN 425 (427)
Q Consensus 423 ~~~ 425 (427)
.+.
T Consensus 244 ~~~ 246 (248)
T PRK08057 244 RHL 246 (248)
T ss_pred HHh
Confidence 653
No 269
>PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN []. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A ....
Probab=27.99 E-value=81 Score=26.55 Aligned_cols=36 Identities=25% Similarity=0.158 Sum_probs=25.7
Q ss_pred ceEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecC
Q 014316 5 GRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYG 42 (427)
Q Consensus 5 ~~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~ 42 (427)
|++.+.+.|..+... ....+..|.+. |++|+++...
T Consensus 1 k~i~l~vtGs~~~~~-~~~~l~~L~~~-g~~v~vv~S~ 36 (129)
T PF02441_consen 1 KRILLGVTGSIAAYK-APDLLRRLKRA-GWEVRVVLSP 36 (129)
T ss_dssp -EEEEEE-SSGGGGG-HHHHHHHHHTT-TSEEEEEESH
T ss_pred CEEEEEEECHHHHHH-HHHHHHHHhhC-CCEEEEEECC
Confidence 467777777665544 77777888886 9999999743
No 270
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=27.77 E-value=3.8e+02 Score=23.53 Aligned_cols=54 Identities=19% Similarity=0.228 Sum_probs=38.7
Q ss_pred EEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec-cCcccccee
Q 014316 343 VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVK 404 (427)
Q Consensus 343 V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~-~~g~~e~v~ 404 (427)
.+..|+ --.+++..++..|.+.+. -.++| .++.++..++|.|... ..-..|++.
T Consensus 48 l~v~~F-~~~~kiQsli~darIVIS----HaG~G---SIL~~~rl~kplIv~pr~s~y~elvD 102 (161)
T COG5017 48 LRVYGF-DKEEKIQSLIHDARIVIS----HAGEG---SILLLLRLDKPLIVVPRSSQYQELVD 102 (161)
T ss_pred cEEEee-chHHHHHHHhhcceEEEe----ccCcc---hHHHHhhcCCcEEEEECchhHHHhhh
Confidence 455666 568899999999998773 22344 4999999999998765 444555553
No 271
>cd03145 GAT1_cyanophycinase Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.
Probab=27.44 E-value=3.3e+02 Score=25.25 Aligned_cols=84 Identities=17% Similarity=0.154 Sum_probs=51.1
Q ss_pred CCEEEEEEeCCC---ChHHHHHHHHHcCCCcEEEecCCC----CcccHHHHHhcCcEEEeeccCC-------CCCCCchH
Q 014316 315 PRLLFIITGKGP---DKESYEEKIRRLRLKRVAFRTMWL----SAEDYPLLLGSADLGVCLHTSS-------SGLDLPMK 380 (427)
Q Consensus 315 ~~~~l~i~G~G~---~~~~~~~~~~~l~l~~V~f~g~~~----~~~~~~~~l~~adi~v~p~~~s-------~~e~~p~~ 380 (427)
+++.++=...+. ..+++.+..+++|...+.++-..- +.+++.+.+..+|+.++.-... ...++-..
T Consensus 30 ~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~v~~~~~~~~~~a~~~~~~~~l~~ad~I~~~GG~~~~~~~~l~~t~l~~~ 109 (217)
T cd03145 30 ARIVVIPAASEEPAEVGEEYRDVFERLGAREVEVLVIDSREAANDPEVVARLRDADGIFFTGGDQLRITSALGGTPLLDA 109 (217)
T ss_pred CcEEEEeCCCcChhHHHHHHHHHHHHcCCceeEEeccCChHHcCCHHHHHHHHhCCEEEEeCCcHHHHHHHHcCChHHHH
Confidence 445444444332 234566677788887666655311 3456788999999998731111 01234446
Q ss_pred HHHHHcCCCcEEEeccCc
Q 014316 381 VVDMFGCGLPVCAVSYSC 398 (427)
Q Consensus 381 ~lEama~G~PVIas~~~g 398 (427)
+-++...|+|++.++.|.
T Consensus 110 l~~~~~~G~v~~G~SAGA 127 (217)
T cd03145 110 LRKVYRGGVVIGGTSAGA 127 (217)
T ss_pred HHHHHHcCCEEEEccHHH
Confidence 777888999999887553
No 272
>PLN03015 UDP-glucosyl transferase
Probab=26.74 E-value=7.7e+02 Score=25.97 Aligned_cols=75 Identities=17% Similarity=0.186 Sum_probs=43.9
Q ss_pred EEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccce-ecCCcEEEeC----
Q 014316 343 VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELV-KVDKNGLLFS---- 413 (427)
Q Consensus 343 V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v-~~~~~G~l~~---- 413 (427)
+.+.+ |+++.+ +|+...+..+. +++. -+.++||+.+|+|+|+-..-+ ....+ +.-+.|+-+.
T Consensus 337 l~v~~-W~PQ~~---vL~h~~vg~fv---tH~G--wnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~ 407 (470)
T PLN03015 337 LVVTQ-WAPQVE---ILSHRSIGGFL---SHCG--WSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPS 407 (470)
T ss_pred eEEEe-cCCHHH---HhccCccCeEE---ecCC--chhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEeccccc
Confidence 44444 788855 45566664443 3331 137999999999999986322 22222 3334454442
Q ss_pred ----ChHHHHHHHHHhc
Q 014316 414 ----SSSELADQLLVNA 426 (427)
Q Consensus 414 ----~~~~la~~l~~~~ 426 (427)
+.+++++++++++
T Consensus 408 ~~~v~~e~i~~~v~~lm 424 (470)
T PLN03015 408 EKVIGREEVASLVRKIV 424 (470)
T ss_pred CCccCHHHHHHHHHHHH
Confidence 3367777777653
No 273
>PTZ00408 NAD-dependent deacetylase; Provisional
Probab=26.72 E-value=4.2e+02 Score=25.18 Aligned_cols=76 Identities=11% Similarity=0.039 Sum_probs=44.8
Q ss_pred cEEEecC-CCCcccHHHHHhcCcEEEeeccCCCC-CCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEeCChHHHH
Q 014316 342 RVAFRTM-WLSAEDYPLLLGSADLGVCLHTSSSG-LDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFSSSSELA 419 (427)
Q Consensus 342 ~V~f~g~-~~~~~~~~~~l~~adi~v~p~~~s~~-e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~~~~~~la 419 (427)
+|.|.|- -++.+.+...+..+|++++. .+|.. ...-.-+.+|-..|.+++.-+....... +..+.++.++..+..
T Consensus 152 ~vV~FGE~~~~~~~~~~~~~~~Dlllvi-GTSl~V~pa~~l~~~a~~~g~~vi~IN~~~~~~~--~~~~~~i~g~~~~~l 228 (242)
T PTZ00408 152 HIVWFGEMPLYMDEIESVMSKTDLFVAV-GTSGNVYPAAGFVGRAQFYGATTLELNLEEGTNY--SQFDESIYGKASVIV 228 (242)
T ss_pred CEEEcCCCCCcHHHHHHHHHhCCEEEEE-ccCCccccHHHHHHHHHHcCCeEEEECCCCCCCC--ccCCEEEECCHHHHH
Confidence 5666665 34556677778999999884 22322 3333345678889999998886543321 122334445554433
Q ss_pred H
Q 014316 420 D 420 (427)
Q Consensus 420 ~ 420 (427)
.
T Consensus 229 ~ 229 (242)
T PTZ00408 229 P 229 (242)
T ss_pred H
Confidence 3
No 274
>TIGR02536 eut_hyp ethanolamine utilization protein. This family of proteins is found in operons for the polyhedral organelle-based degradation of ethanolamine. This family is not found in proteobacterial species which otherwise have the same suite of genes in the eut operon. Proteobacteria have two genes that are not found in non-proteobacteria which may complement this genes function, a phosphotransacetylase (pfam01515) and the EutJ protein (TIGR02529) of unknown function.
Probab=26.51 E-value=1.5e+02 Score=27.61 Aligned_cols=40 Identities=13% Similarity=0.029 Sum_probs=28.2
Q ss_pred HHhcCcEEEeeccCCCC-----CCCc-----hHHHHHHcCCCcEEEeccC
Q 014316 358 LLGSADLGVCLHTSSSG-----LDLP-----MKVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 358 ~l~~adi~v~p~~~s~~-----e~~p-----~~~lEama~G~PVIas~~~ 397 (427)
....||++++|..+... -|.+ ..+++++..|+||++..-|
T Consensus 50 ~~~~~dillv~~Lt~n~lskIAlGi~d~~~~~~I~~~LL~GK~V~v~~eg 99 (207)
T TIGR02536 50 EQKLADILLVSRLSIKELNNISHGQETNEKEKFIIAFLLEGKPIYILKPG 99 (207)
T ss_pred hhhcCCEEEEccCCHHHHHHHHccCCCCHHHHHHHHHHHCCCeEEEEecc
Confidence 46689999986332211 2333 6799999999999998643
No 275
>COG2120 Uncharacterized proteins, LmbE homologs [Function unknown]
Probab=26.39 E-value=5.3e+02 Score=24.27 Aligned_cols=18 Identities=33% Similarity=0.298 Sum_probs=13.7
Q ss_pred HHHHHhhCCCcEEEEecCC
Q 014316 25 ALSLARQMSLEVDVVAYGG 43 (427)
Q Consensus 25 a~~La~~~g~~V~vi~~~~ 43 (427)
+..++++ |++|+++|...
T Consensus 31 la~~~~~-G~~V~v~~lT~ 48 (237)
T COG2120 31 LAKLAAR-GVEVTVVCLTL 48 (237)
T ss_pred HHHHHHC-CCeEEEEEccC
Confidence 3566776 99999999543
No 276
>KOG3076 consensus 5'-phosphoribosylglycinamide formyltransferase [Carbohydrate transport and metabolism]
Probab=26.23 E-value=4.5e+02 Score=24.24 Aligned_cols=33 Identities=15% Similarity=0.274 Sum_probs=19.9
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEeccc
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNF 137 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~ 137 (427)
.++|+|.+-. +...+-+-++..+.+. |+.+|-.
T Consensus 86 ~~~d~v~lAG---~M~iLs~~fl~~~~~~--iiNIHPa 118 (206)
T KOG3076|consen 86 LGTDLVCLAG---YMRILSGEFLSQLPKR--IINIHPA 118 (206)
T ss_pred hCCCEEEehh---hHHHcCHHHHhhcccc--eEecccc
Confidence 7999998876 3333324444444333 7788854
No 277
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=26.10 E-value=3.6e+02 Score=25.08 Aligned_cols=82 Identities=15% Similarity=0.099 Sum_probs=47.6
Q ss_pred EEEEEEeCCCCh-HHHHHHHHHcCCC--cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEE
Q 014316 317 LLFIITGKGPDK-ESYEEKIRRLRLK--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA 393 (427)
Q Consensus 317 ~~l~i~G~G~~~-~~~~~~~~~l~l~--~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIa 393 (427)
-.++++|.-+.. ...++.++..|.. +=+|+|+-+..-.... +..=|++++. ....+ ..++.||--.|+|+|+
T Consensus 68 ~~ILfVgTk~~~~~~v~k~A~~~g~~~v~~RWlgG~LTN~~~~~-~~~Pdliiv~--dp~~~--~~AI~EA~kl~IP~Ia 142 (204)
T PRK04020 68 EKILVVSSRQYGQKPVQKFAEVVGAKAITGRFIPGTLTNPSLKG-YIEPDVVVVT--DPRGD--AQAVKEAIEVGIPVVA 142 (204)
T ss_pred CeEEEEeCCHHHHHHHHHHHHHhCCeeecCccCCCcCcCcchhc-cCCCCEEEEE--CCccc--HHHHHHHHHhCCCEEE
Confidence 467778865533 4456666666653 2256776343333322 3355666652 22223 4589999999999998
Q ss_pred ec-cCccccce
Q 014316 394 VS-YSCIEELV 403 (427)
Q Consensus 394 s~-~~g~~e~v 403 (427)
-- ..+-++.|
T Consensus 143 ivDTn~dp~~V 153 (204)
T PRK04020 143 LCDTDNLTSNV 153 (204)
T ss_pred EEeCCCCcccC
Confidence 63 44444443
No 278
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=26.07 E-value=7.5e+02 Score=25.62 Aligned_cols=40 Identities=13% Similarity=0.121 Sum_probs=28.4
Q ss_pred CCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHH
Q 014316 315 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPL 357 (427)
Q Consensus 315 ~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~ 357 (427)
+...++=+|+|....-+.+..++++. +|...|. ..++...
T Consensus 216 ~~AI~vpVGGGGLiaGIat~vk~~~p-~vkIIGV--Et~~a~~ 255 (457)
T KOG1250|consen 216 DGAIVVPVGGGGLIAGIATGVKRVGP-HVKIIGV--ETEGAHS 255 (457)
T ss_pred CCeEEEecCCchhHHHHHHHHHHhCC-CCceEEE--eecCcHH
Confidence 34778888988888888888888876 7777773 4444333
No 279
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=25.90 E-value=2.6e+02 Score=27.32 Aligned_cols=76 Identities=9% Similarity=0.067 Sum_probs=43.9
Q ss_pred EEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcc-----------cHHHHHhcCcEEEeeccCCC----------CC
Q 014316 317 LLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAE-----------DYPLLLGSADLGVCLHTSSS----------GL 375 (427)
Q Consensus 317 ~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~-----------~~~~~l~~adi~v~p~~~s~----------~e 375 (427)
.+|.++|...-+-++-+...+.|. .|...|+ +.+ ...+.++.+|+.++|...+. .+
T Consensus 3 ~~~~v~ggd~r~~~~~~~l~~~G~-~v~~~g~--~~~~~~~~g~~~~~~~~~~~~~ad~ii~~~p~~~~~~~i~~~~~~~ 79 (296)
T PRK08306 3 KHIAVIGGDARQLELIRKLVELGA-KVSLVGF--DQLDHGFTGATKSSSLEEALSDVDVIILPVPGTNDEGNVDTVFSNE 79 (296)
T ss_pred cEEEEEcCcHHHHHHHHHHHHCCC-EEEEEec--cccccccCCceeeccHHHHhccCCEEEECCccccCCceeecccccc
Confidence 567777754322233333344453 3555665 222 33577999999999733211 12
Q ss_pred C--CchHHHHHHcCCCcEEEec
Q 014316 376 D--LPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 376 ~--~p~~~lEama~G~PVIas~ 395 (427)
. +....++.|--|..+++..
T Consensus 80 ~~~~~~~~l~~l~~~~~v~~G~ 101 (296)
T PRK08306 80 KLVLTEELLELTPEHCTIFSGI 101 (296)
T ss_pred CCcchHHHHHhcCCCCEEEEec
Confidence 2 2347899999998777544
No 280
>COG1348 NifH Nitrogenase subunit NifH (ATPase) [Inorganic ion transport and metabolism]
Probab=25.72 E-value=1.2e+02 Score=29.15 Aligned_cols=38 Identities=24% Similarity=0.241 Sum_probs=34.0
Q ss_pred cceEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecC
Q 014316 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYG 42 (427)
Q Consensus 4 ~~~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~ 42 (427)
|++++|.-.|.+|.|.-.++.+.+|++. |+.|.++..+
T Consensus 1 mr~iAiYGKGGIGKSTts~N~aAAla~~-GkkVl~vGCD 38 (278)
T COG1348 1 MRQIAIYGKGGIGKSTTSQNLAAALAEL-GKKVLIVGCD 38 (278)
T ss_pred CceEEEecCCCcCcchhHHHHHHHHHHc-CCeEEEEcCC
Confidence 4678999999999999999999999996 9999999744
No 281
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=25.35 E-value=2.5e+02 Score=23.00 Aligned_cols=77 Identities=16% Similarity=0.160 Sum_probs=41.8
Q ss_pred EEEEEeCCCChHHHHHHHHHcC-CC-cEEEecCCCCcccH---HHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEE
Q 014316 318 LFIITGKGPDKESYEEKIRRLR-LK-RVAFRTMWLSAEDY---PLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC 392 (427)
Q Consensus 318 ~l~i~G~G~~~~~~~~~~~~l~-l~-~V~f~g~~~~~~~~---~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVI 392 (427)
++.++|.|......+.+...+. +. ++.+... .+.+ ...+..-|++++...+......-..+-.|-..|.|||
T Consensus 2 ~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~---~~~~~~~~~~~~~~d~vi~iS~sG~t~~~~~~~~~a~~~g~~vi 78 (128)
T cd05014 2 KVVVTGVGKSGHIARKIAATLSSTGTPAFFLHP---TEALHGDLGMVTPGDVVIAISNSGETDELLNLLPHLKRRGAPII 78 (128)
T ss_pred eEEEEeCcHhHHHHHHHHHHhhcCCCceEEccc---chhhccccCcCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCeEE
Confidence 4688898865544444433332 11 3444432 2222 2345677898886333333334445556677799999
Q ss_pred EeccC
Q 014316 393 AVSYS 397 (427)
Q Consensus 393 as~~~ 397 (427)
+--..
T Consensus 79 ~iT~~ 83 (128)
T cd05014 79 AITGN 83 (128)
T ss_pred EEeCC
Confidence 76543
No 282
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=25.31 E-value=2.7e+02 Score=25.74 Aligned_cols=11 Identities=18% Similarity=0.081 Sum_probs=6.7
Q ss_pred HHHHHHhhHHH
Q 014316 276 LLEAALMYDRR 286 (427)
Q Consensus 276 Li~a~~~l~~~ 286 (427)
-+++++++.++
T Consensus 42 a~~~I~~l~~~ 52 (201)
T PRK06015 42 ALDAIRAVAAE 52 (201)
T ss_pred HHHHHHHHHHH
Confidence 35666666665
No 283
>COG4981 Enoyl reductase domain of yeast-type FAS1 [Lipid metabolism]
Probab=24.99 E-value=75 Score=33.87 Aligned_cols=49 Identities=24% Similarity=0.296 Sum_probs=40.1
Q ss_pred CCCEEEEEEeCC-CChHHHHHHHHHc---CCCcEEEecCCCCcccHHHHHhcCcEE
Q 014316 314 YPRLLFIITGKG-PDKESYEEKIRRL---RLKRVAFRTMWLSAEDYPLLLGSADLG 365 (427)
Q Consensus 314 ~~~~~l~i~G~G-~~~~~~~~~~~~l---~l~~V~f~g~~~~~~~~~~~l~~adi~ 365 (427)
+| +..++++.| |+.++..+++++| |++.|-|..+ +-+++.+.++-|+..
T Consensus 122 ~~-I~gvvIsAGIP~le~A~ElI~~L~~~G~~yv~fKPG--tIeqI~svi~IAka~ 174 (717)
T COG4981 122 AP-IDGVVISAGIPSLEEAVELIEELGDDGFPYVAFKPG--TIEQIRSVIRIAKAN 174 (717)
T ss_pred CC-cceEEEecCCCcHHHHHHHHHHHhhcCceeEEecCC--cHHHHHHHHHHHhcC
Confidence 44 776666655 8899999999999 7778888886 789999999988865
No 284
>PRK08328 hypothetical protein; Provisional
Probab=24.60 E-value=2e+02 Score=26.94 Aligned_cols=63 Identities=19% Similarity=0.180 Sum_probs=39.3
Q ss_pred HHHHHHcCCC-cEE-EecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHH--HHcCCCcEEEeccCcc
Q 014316 332 EEKIRRLRLK-RVA-FRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVD--MFGCGLPVCAVSYSCI 399 (427)
Q Consensus 332 ~~~~~~l~l~-~V~-f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lE--ama~G~PVIas~~~g~ 399 (427)
.+.+++++-+ +|. +.+. ++.+++.++++.+|+++.... + .+ ...++. +...|+|+|...+.|.
T Consensus 88 ~~~l~~~np~v~v~~~~~~-~~~~~~~~~l~~~D~Vid~~d-~-~~--~r~~l~~~~~~~~ip~i~g~~~g~ 154 (231)
T PRK08328 88 KWKLERFNSDIKIETFVGR-LSEENIDEVLKGVDVIVDCLD-N-FE--TRYLLDDYAHKKGIPLVHGAVEGT 154 (231)
T ss_pred HHHHHHhCCCCEEEEEecc-CCHHHHHHHHhcCCEEEECCC-C-HH--HHHHHHHHHHHcCCCEEEEeeccC
Confidence 3445555433 333 3333 567778889999999997422 1 11 234555 6789999998775544
No 285
>COG1647 Esterase/lipase [General function prediction only]
Probab=24.54 E-value=6.2e+02 Score=24.10 Aligned_cols=40 Identities=20% Similarity=0.252 Sum_probs=30.2
Q ss_pred ceEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCC
Q 014316 5 GRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSK 45 (427)
Q Consensus 5 ~~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~ 45 (427)
.++++...|-.|.+.-+...+..|.++ ||.|++=.+++-.
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~-GyTv~aP~ypGHG 54 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNEN-GYTVYAPRYPGHG 54 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHC-CceEecCCCCCCC
Confidence 366777777666666688889999996 9999887766543
No 286
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=24.49 E-value=3.5e+02 Score=22.39 Aligned_cols=42 Identities=17% Similarity=0.115 Sum_probs=25.9
Q ss_pred CCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHh
Q 014316 315 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG 360 (427)
Q Consensus 315 ~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~ 360 (427)
+++.+++.|..+. ++ .+..+++|++.+.-.| .+.+++-.++.
T Consensus 80 ~~i~i~~GG~~~~-~~-~~~~~~~G~d~~~~~~--~~~~~~~~~~~ 121 (122)
T cd02071 80 GDILVVGGGIIPP-ED-YELLKEMGVAEIFGPG--TSIEEIIDKIR 121 (122)
T ss_pred CCCEEEEECCCCH-HH-HHHHHHCCCCEEECCC--CCHHHHHHHHh
Confidence 3566666665552 22 3556678888766655 37777776654
No 287
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=24.41 E-value=86 Score=29.64 Aligned_cols=39 Identities=21% Similarity=0.231 Sum_probs=29.0
Q ss_pred cceEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCC
Q 014316 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGG 43 (427)
Q Consensus 4 ~~~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~ 43 (427)
|+++.|+..|+.|.+--..+.|..|+++ |+.|-++-.+.
T Consensus 1 m~~iav~~KGGvGKTT~~~nLA~~La~~-G~kVlliD~Dp 39 (270)
T cd02040 1 MRQIAIYGKGGIGKSTTTQNLSAALAEM-GKKVMIVGCDP 39 (270)
T ss_pred CcEEEEEeCCcCCHHHHHHHHHHHHHhC-CCeEEEEEcCC
Confidence 3567776666666666677888999996 99999996543
No 288
>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut
Probab=24.30 E-value=3.1e+02 Score=26.39 Aligned_cols=39 Identities=18% Similarity=0.161 Sum_probs=28.2
Q ss_pred cHHHHHh--cCcEEEeeccCCCCCCCchHHHHHHc--CCCcEEEe
Q 014316 354 DYPLLLG--SADLGVCLHTSSSGLDLPMKVVDMFG--CGLPVCAV 394 (427)
Q Consensus 354 ~~~~~l~--~adi~v~p~~~s~~e~~p~~~lEama--~G~PVIas 394 (427)
++.+.++ ..|+++=. |...--|.--++++|+ +..|+|-.
T Consensus 97 ~L~eav~~~kptvlIG~--S~~~g~ft~evv~~Ma~~~~~PIIFa 139 (254)
T cd00762 97 DLEDAVEAAKPDFLIGV--SRVGGAFTPEVIRAXAEINERPVIFA 139 (254)
T ss_pred CHHHHHHhhCCCEEEEe--CCCCCCCCHHHHHHHhhcCCCCEEEE
Confidence 5677777 88998864 2224568888999998 56688844
No 289
>COG1154 Dxs Deoxyxylulose-5-phosphate synthase [Coenzyme metabolism / Lipid metabolism]
Probab=24.30 E-value=1.3e+02 Score=32.67 Aligned_cols=120 Identities=18% Similarity=0.126 Sum_probs=76.7
Q ss_pred hhhhcCCccc-CCCCEEEEEEeCCCChHHHHHHHHHc---CCC----cEEEecCCCCcccHHHHHhcCcEEEeeccCCCC
Q 014316 303 LKEISDGKQY-LYPRLLFIITGKGPDKESYEEKIRRL---RLK----RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG 374 (427)
Q Consensus 303 ~~~~~~~~~~-~~~~~~l~i~G~G~~~~~~~~~~~~l---~l~----~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~ 374 (427)
+++++.|+.. ..+.-.+.|++-|.......+.+++| |+. +.+|.-. ++.+-+.++.+..+++|..-.....
T Consensus 487 ~~~~~~Gk~~i~~~G~~vail~~G~~~~~al~vae~L~~~Gi~~TVvd~rfvkP-lD~~ll~~La~~h~~~vtlEe~~~~ 565 (627)
T COG1154 487 LEPLEIGKGELLKEGEKVAILAFGTMLPEALKVAEKLNAYGISVTVVDPRFVKP-LDEALLLELAKSHDLVVTLEENVVD 565 (627)
T ss_pred cccccccceEEEecCCcEEEEecchhhHHHHHHHHHHHhcCCCcEEEcCeecCC-CCHHHHHHHHhhcCeEEEEecCccc
Confidence 4556666432 22234556666666555555555554 442 4677776 7788899999999999876433444
Q ss_pred CCCchHHHHHHcCCC---cEEEeccCccccceecCCcEEEe----CChHHHHHHHHHh
Q 014316 375 LDLPMKVVDMFGCGL---PVCAVSYSCIEELVKVDKNGLLF----SSSSELADQLLVN 425 (427)
Q Consensus 375 e~~p~~~lEama~G~---PVIas~~~g~~e~v~~~~~G~l~----~~~~~la~~l~~~ 425 (427)
-|||..++|+++.-- ||. +.|-..+++.|+...-+. -|.+.++++|.++
T Consensus 566 GG~Gs~v~efl~~~~~~~~v~--~lglpd~fi~hg~~~el~~~~gLd~~~i~~~i~~~ 621 (627)
T COG1154 566 GGFGSAVLEFLAAHGILVPVL--NLGLPDEFIDHGSPEELLAELGLDAEGIARRILEW 621 (627)
T ss_pred ccHHHHHHHHHHhcCCCCceE--EecCChHhhccCCHHHHHHHcCCCHHHHHHHHHHH
Confidence 799999999987543 443 355556667776654444 3567777777654
No 290
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=24.21 E-value=3.4e+02 Score=27.80 Aligned_cols=75 Identities=20% Similarity=0.226 Sum_probs=45.5
Q ss_pred EEEEEEeCCCChHHHHHHHHHcCCCcEEEecC-----------------CCCcccHHHHHh--cCcEEEeeccCCCC-CC
Q 014316 317 LLFIITGKGPDKESYEEKIRRLRLKRVAFRTM-----------------WLSAEDYPLLLG--SADLGVCLHTSSSG-LD 376 (427)
Q Consensus 317 ~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~-----------------~~~~~~~~~~l~--~adi~v~p~~~s~~-e~ 376 (427)
++++-.-.+.+.+.+.+++++++.+.|..... +.-.+.+.++.. .+|++|.. ..+ .+
T Consensus 28 f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~~~~~l~~~~~vD~Vv~A---i~G~aG 104 (385)
T PRK05447 28 FRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEEGLCELAALPEADVVVAA---IVGAAG 104 (385)
T ss_pred cEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChhHHHHHhcCCCCCEEEEe---CcCccc
Confidence 44433334667778888888776554433221 001445555555 35888874 334 45
Q ss_pred CchHHHHHHcCCCcEEEec
Q 014316 377 LPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 377 ~p~~~lEama~G~PVIas~ 395 (427)
+ ...++|+.+|++|...+
T Consensus 105 l-~ptl~Ai~aGK~VaLAN 122 (385)
T PRK05447 105 L-LPTLAAIRAGKRIALAN 122 (385)
T ss_pred H-HHHHHHHHCCCcEEEeC
Confidence 5 46899999999999865
No 291
>PRK13181 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional
Probab=24.15 E-value=4.2e+02 Score=23.94 Aligned_cols=63 Identities=14% Similarity=0.145 Sum_probs=40.8
Q ss_pred ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCC--------CCCCchHHHHHHcCCCcEEEeccC
Q 014316 327 DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS--------GLDLPMKVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 327 ~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~--------~e~~p~~~lEama~G~PVIas~~~ 397 (427)
+...+.+.++.+|.+ +.+... .+ -+..+|.+|+|=..+. ..++...+.++...|+||+++-.|
T Consensus 11 n~~~~~~~l~~~g~~-v~~~~~---~~----~l~~~d~lilpG~g~~~~~~~~l~~~~~~~~i~~~~~~~~PvlGiC~G 81 (199)
T PRK13181 11 NLRSVANALKRLGVE-AVVSSD---PE----EIAGADKVILPGVGAFGQAMRSLRESGLDEALKEHVEKKQPVLGICLG 81 (199)
T ss_pred hHHHHHHHHHHCCCc-EEEEcC---hH----HhccCCEEEECCCCCHHHHHHHHHHCChHHHHHHHHHCCCCEEEECHh
Confidence 346667777887764 555443 33 3568999998621111 024556788888999999998655
No 292
>PRK08883 ribulose-phosphate 3-epimerase; Provisional
Probab=24.15 E-value=5.9e+02 Score=23.73 Aligned_cols=82 Identities=9% Similarity=0.072 Sum_probs=50.9
Q ss_pred CChHHHHHHHHHcCCCc-EEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCch---------HHHHHHc------CCC
Q 014316 326 PDKESYEEKIRRLRLKR-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPM---------KVVDMFG------CGL 389 (427)
Q Consensus 326 ~~~~~~~~~~~~l~l~~-V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~---------~~lEama------~G~ 389 (427)
+...+.-+.++++|.+- +.+-.. -+.+.+..++...|.+++. +..-||+. ++-|.-. .++
T Consensus 93 ~~~~~~l~~ik~~g~k~GlalnP~-Tp~~~i~~~l~~~D~vlvM---tV~PGfgGq~fi~~~lekI~~l~~~~~~~~~~~ 168 (220)
T PRK08883 93 EHVDRTLQLIKEHGCQAGVVLNPA-TPLHHLEYIMDKVDLILLM---SVNPGFGGQSFIPHTLDKLRAVRKMIDESGRDI 168 (220)
T ss_pred ccHHHHHHHHHHcCCcEEEEeCCC-CCHHHHHHHHHhCCeEEEE---EecCCCCCceecHhHHHHHHHHHHHHHhcCCCe
Confidence 34456667889999874 555554 7899999999999999764 22222221 2333221 236
Q ss_pred cEEEeccCcc-----ccceecCCcEEEeC
Q 014316 390 PVCAVSYSCI-----EELVKVDKNGLLFS 413 (427)
Q Consensus 390 PVIas~~~g~-----~e~v~~~~~G~l~~ 413 (427)
|+.+ .||+ +++++.|-++++++
T Consensus 169 ~I~v--dGGI~~eni~~l~~aGAd~vVvG 195 (220)
T PRK08883 169 RLEI--DGGVKVDNIREIAEAGADMFVAG 195 (220)
T ss_pred eEEE--ECCCCHHHHHHHHHcCCCEEEEe
Confidence 6655 4443 45666788888773
No 293
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=24.07 E-value=4.4e+02 Score=22.55 Aligned_cols=46 Identities=24% Similarity=0.268 Sum_probs=27.6
Q ss_pred CCCEEEEEEeCCC----ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhc
Q 014316 314 YPRLLFIITGKGP----DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS 361 (427)
Q Consensus 314 ~~~~~l~i~G~G~----~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~ 361 (427)
.+++.+++.|... +.++.++.++++|++.| |-+. .+.+++..++..
T Consensus 83 ~~~~~i~vGG~~~~~~~~~~~~~~~l~~~G~~~v-f~~~-~~~~~i~~~l~~ 132 (137)
T PRK02261 83 LGDILLYVGGNLVVGKHDFEEVEKKFKEMGFDRV-FPPG-TDPEEAIDDLKK 132 (137)
T ss_pred CCCCeEEEECCCCCCccChHHHHHHHHHcCCCEE-ECcC-CCHHHHHHHHHH
Confidence 4466666655431 23456677888887544 5444 577777776653
No 294
>TIGR00853 pts-lac PTS system, lactose/cellobiose family IIB component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Lac family includes several sequenced lactose (b-galactoside) permeases of Gram-positive bacteria as well as those in E. coli. While the Lac family usually consists of two polypeptide components IIA and IICB, the Chb permease of E. coli consists of three IIA, IIB and IIC. This family is specific for the IIB subunit of the Lac PTS family.
Probab=23.97 E-value=2.1e+02 Score=22.88 Aligned_cols=69 Identities=13% Similarity=0.154 Sum_probs=42.6
Q ss_pred EEEEeCCCCh----HHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHc--CCCcE
Q 014316 319 FIITGKGPDK----ESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFG--CGLPV 391 (427)
Q Consensus 319 l~i~G~G~~~----~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama--~G~PV 391 (427)
++++|.|-.. ..+++.+++.|++ +|.-. +..++......+|++++. ....+=..-++..+ .|+||
T Consensus 7 Ll~C~~G~sSS~l~~k~~~~~~~~gi~~~v~a~----~~~~~~~~~~~~Dvill~----pqi~~~~~~i~~~~~~~~ipv 78 (95)
T TIGR00853 7 LLLCAAGMSTSLLVNKMNKAAEEYGVPVKIAAG----SYGAAGEKLDDADVVLLA----PQVAYMLPDLKKETDKKGIPV 78 (95)
T ss_pred EEECCCchhHHHHHHHHHHHHHHCCCcEEEEEe----cHHHHHhhcCCCCEEEEC----chHHHHHHHHHHHhhhcCCCE
Confidence 6777877433 3556777777776 44443 466777888999998872 22111123344444 46799
Q ss_pred EEec
Q 014316 392 CAVS 395 (427)
Q Consensus 392 Ias~ 395 (427)
...+
T Consensus 79 ~~I~ 82 (95)
T TIGR00853 79 EVIN 82 (95)
T ss_pred EEeC
Confidence 8865
No 295
>cd05564 PTS_IIB_chitobiose_lichenan PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In these systems, EII is either a lichenan- or an N,N-diacetylchitobiose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. In the chitobiose system, these subunits are expressed as separate proteins from chbA, chbB, and chbC of the chb operon (formerly the cel (cellulose) operon). In the lichenan system, these subunits are expressed from licA, licB, and licC of the lic operon. The lic operon of Bacillus subtilis is required for the transport and degradation of oligomeric beta-glucosides, which are produced by extracellular enzymes on substrates such as lichenan or barley glucan. The lic operon is transcribed from a gammaA-dependent promoter and is inducible by lichenan, lichenan hydrolysate, and cellobiose. The IIB d
Probab=23.83 E-value=2.6e+02 Score=22.27 Aligned_cols=69 Identities=10% Similarity=0.223 Sum_probs=42.8
Q ss_pred EEEEeCCCCh----HHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHH--HHcCCCcE
Q 014316 319 FIITGKGPDK----ESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVD--MFGCGLPV 391 (427)
Q Consensus 319 l~i~G~G~~~----~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lE--ama~G~PV 391 (427)
++++|.|-.. ..+++.+++.|++ +|.-. +..++......+|+.++. ....+=.+-++ +.-.++||
T Consensus 3 l~~Cg~G~sTS~~~~ki~~~~~~~~~~~~v~~~----~~~~~~~~~~~~Diil~~----Pqv~~~~~~i~~~~~~~~~pv 74 (96)
T cd05564 3 LLVCSAGMSTSILVKKMKKAAEKRGIDAEIEAV----PESELEEYIDDADVVLLG----PQVRYMLDEVKKKAAEYGIPV 74 (96)
T ss_pred EEEcCCCchHHHHHHHHHHHHHHCCCceEEEEe----cHHHHHHhcCCCCEEEEC----hhHHHHHHHHHHHhccCCCcE
Confidence 5677777433 4567777777876 45553 466677788999999873 22112123333 33578898
Q ss_pred EEec
Q 014316 392 CAVS 395 (427)
Q Consensus 392 Ias~ 395 (427)
..-+
T Consensus 75 ~~I~ 78 (96)
T cd05564 75 AVID 78 (96)
T ss_pred EEcC
Confidence 8765
No 296
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=23.82 E-value=2.4e+02 Score=26.42 Aligned_cols=37 Identities=22% Similarity=0.204 Sum_probs=23.5
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEeccc
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNF 137 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~ 137 (427)
...|+|+..-|.......+..+...+ +=++|+|.-+.
T Consensus 59 ~~aDVVvLAVP~~a~~~v~~~l~~~~-~~KIvID~tnp 95 (211)
T COG2085 59 ALADVVVLAVPFEAIPDVLAELRDAL-GGKIVIDATNP 95 (211)
T ss_pred hcCCEEEEeccHHHHHhHHHHHHHHh-CCeEEEecCCC
Confidence 56999999876554444433333333 45889988776
No 297
>PRK09620 hypothetical protein; Provisional
Probab=23.77 E-value=6.1e+02 Score=23.77 Aligned_cols=20 Identities=15% Similarity=-0.092 Sum_probs=15.0
Q ss_pred HHHHHHHHhhCCCcEEEEecC
Q 014316 22 QYQALSLARQMSLEVDVVAYG 42 (427)
Q Consensus 22 ~~~a~~La~~~g~~V~vi~~~ 42 (427)
.+.|..|.++ |++|++++..
T Consensus 33 s~LA~~L~~~-Ga~V~li~g~ 52 (229)
T PRK09620 33 RIIAEELISK-GAHVIYLHGY 52 (229)
T ss_pred HHHHHHHHHC-CCeEEEEeCC
Confidence 4456778886 9999999743
No 298
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=23.59 E-value=5.1e+02 Score=26.56 Aligned_cols=24 Identities=21% Similarity=0.339 Sum_probs=18.1
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWAS 123 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~ 123 (427)
.++|+|++.+||.........+.+
T Consensus 250 ~~yD~IiIDtpP~l~~~t~~al~a 273 (405)
T PRK13869 250 DDYDVVVIDCPPQLGFLTLSGLCA 273 (405)
T ss_pred ccCCEEEEECCCchhHHHHHHHHH
Confidence 579999999999887665444444
No 299
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=23.47 E-value=2.3e+02 Score=28.43 Aligned_cols=84 Identities=13% Similarity=0.077 Sum_probs=56.3
Q ss_pred CEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCC-----------cccHHHHHhcCcEEEeeccC--CCCCCCchHHH
Q 014316 316 RLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLS-----------AEDYPLLLGSADLGVCLHTS--SSGLDLPMKVV 382 (427)
Q Consensus 316 ~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~-----------~~~~~~~l~~adi~v~p~~~--s~~e~~p~~~l 382 (427)
.=++-|+|-|.--..+.+..+..+ ..+.+...|.. ..++.+++.+||+.++.... ....-+--+++
T Consensus 162 gK~vgilG~G~IG~~ia~rL~~Fg-~~i~y~~r~~~~~~~~~~~~~~~~d~~~~~~~sD~ivv~~pLt~~T~~liNk~~~ 240 (336)
T KOG0069|consen 162 GKTVGILGLGRIGKAIAKRLKPFG-CVILYHSRTQLPPEEAYEYYAEFVDIEELLANSDVIVVNCPLTKETRHLINKKFI 240 (336)
T ss_pred CCEEEEecCcHHHHHHHHhhhhcc-ceeeeecccCCchhhHHHhcccccCHHHHHhhCCEEEEecCCCHHHHHHhhHHHH
Confidence 356888898865455444444455 45666554222 33778899999999763222 22255667899
Q ss_pred HHHcCCCcEEEeccCccc
Q 014316 383 DMFGCGLPVCAVSYSCIE 400 (427)
Q Consensus 383 Eama~G~PVIas~~~g~~ 400 (427)
++|--|.-+|.+.-|++-
T Consensus 241 ~~mk~g~vlVN~aRG~ii 258 (336)
T KOG0069|consen 241 EKMKDGAVLVNTARGAII 258 (336)
T ss_pred HhcCCCeEEEeccccccc
Confidence 999999999999877753
No 300
>PF03308 ArgK: ArgK protein; InterPro: IPR005129 Bacterial periplasmic transport systems require the function of a specific substrate-binding protein, located in the periplasm, and several cytoplasmic membrane transport components. In Escherichia coli, the arginine-ornithine transport system requires an arginine-ornithine-binding protein and the lysine-arginine-ornithine (LAO) transport system includes a LAO-binding protein. Both periplasmic proteins can be phosphorylated by a single kinase, ArgK [] resulting in reduced levels of transport activity of the periplasmic transport systems that include each of the binding proteins. The ArgK protein acts as an ATPase enzyme and as a kinase.; PDB: 3MD0_A 3P32_A 2QM7_A 2QM8_A 2WWW_D 2P67_A 3NXS_A.
Probab=23.25 E-value=3.2e+02 Score=26.50 Aligned_cols=106 Identities=17% Similarity=0.195 Sum_probs=52.2
Q ss_pred CCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCC------------cccccCCCceEEEEeecCCCCCCCCcchhhHHHH
Q 014316 13 GDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKP------------HAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLL 80 (427)
Q Consensus 13 ~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~------------~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~ 80 (427)
.+.|-|.-+...+..+.++ |+.|-|++-+++.+ ..+....+|+-+..++ .+ ..+.-..+....
T Consensus 38 PGaGKSTli~~l~~~~~~~-g~~VaVlAVDPSSp~tGGAlLGDRiRM~~~~~d~~vfIRS~a--tR--G~lGGls~~t~~ 112 (266)
T PF03308_consen 38 PGAGKSTLIDALIRELRER-GKRVAVLAVDPSSPFTGGALLGDRIRMQELSRDPGVFIRSMA--TR--GSLGGLSRATRD 112 (266)
T ss_dssp TTSSHHHHHHHHHHHHHHT-T--EEEEEE-GGGGCC---SS--GGGCHHHHTSTTEEEEEE-------SSHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHhhc-CCceEEEEECCCCCCCCCcccccHHHhcCcCCCCCEEEeecC--cC--CCCCCccHhHHH
Confidence 3333344455566777775 99999999554322 2334567899999988 32 112222333232
Q ss_pred HHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccc
Q 014316 81 LLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFG 138 (427)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~ 138 (427)
..+++ +...+|+|++-+-.--..- .-++.....=+++..-+.+
T Consensus 113 ~v~ll------------~aaG~D~IiiETVGvGQsE---~~I~~~aD~~v~v~~Pg~G 155 (266)
T PF03308_consen 113 AVRLL------------DAAGFDVIIIETVGVGQSE---VDIADMADTVVLVLVPGLG 155 (266)
T ss_dssp HHHHH------------HHTT-SEEEEEEESSSTHH---HHHHTTSSEEEEEEESSTC
T ss_pred HHHHH------------HHcCCCEEEEeCCCCCccH---HHHHHhcCeEEEEecCCCc
Confidence 22222 3378999999872222221 2234444544455444443
No 301
>COG0489 Mrp ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=23.24 E-value=6.7e+02 Score=24.03 Aligned_cols=28 Identities=25% Similarity=0.249 Sum_probs=22.7
Q ss_pred eCCCCCChhHHHHHHHHHhhCCCcEEEEe
Q 014316 12 LGDLGRSPRMQYQALSLARQMSLEVDVVA 40 (427)
Q Consensus 12 ~~~~~~~~r~~~~a~~La~~~g~~V~vi~ 40 (427)
.++.|.|.-..+.|.++|+. |..|-++-
T Consensus 66 kgGvGKStva~nLA~alA~~-G~rVlliD 93 (265)
T COG0489 66 KGGVGKSTVAVNLAAALAQL-GKRVLLLD 93 (265)
T ss_pred CCCCcHHHHHHHHHHHHHhc-CCcEEEEe
Confidence 35556677788899999996 99999996
No 302
>PLN02735 carbamoyl-phosphate synthase
Probab=23.15 E-value=1.3e+03 Score=27.29 Aligned_cols=19 Identities=11% Similarity=0.111 Sum_probs=13.9
Q ss_pred HHHHhhCCCcEEEEecCCCC
Q 014316 26 LSLARQMSLEVDVVAYGGSK 45 (427)
Q Consensus 26 ~~La~~~g~~V~vi~~~~~~ 45 (427)
.+|.+ .|+++.++....+.
T Consensus 602 ~alr~-~G~~tI~v~~npet 620 (1102)
T PLN02735 602 FALQD-AGYETIMMNSNPET 620 (1102)
T ss_pred HHHHH-cCCeEEEEeCCCcc
Confidence 45555 59999999876654
No 303
>cd01452 VWA_26S_proteasome_subunit 26S proteasome plays a major role in eukaryotic protein breakdown, especially for ubiquitin-tagged proteins. It is an ATP-dependent protease responsible for the bulk of non-lysosomal proteolysis in eukaryotes, often using covalent modification of proteins by ubiquitylation. It consists of a 20S proteolytic core particle (CP) and a 19S regulatory particle (RP). The CP is an ATP independent peptidase consisting of hydrolyzing activities. One or both ends of CP carry the RP that confers both ubiquitin and ATP dependence to the 26S proteosome. The RP's proposed functions include recognition of substrates and translocation of these to CP for proteolysis. The RP can dissociate into a stable lid and base subcomplexes. The base is composed of three non-ATPase subunits (Rpn 1, 2 and 10). A single residue in the vWA domain of Rpn10 has been implicated to be responsible for stabilizing the lid-base association.
Probab=23.07 E-value=3.5e+02 Score=24.71 Aligned_cols=57 Identities=16% Similarity=0.290 Sum_probs=37.1
Q ss_pred ceEEEEEeCCCCCChh-HHHHHHHHHhhCCCcEEEEecCCCCCcc--------cccCCCceEEEEee
Q 014316 5 GRACVVVLGDLGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHA--------AILEHPSIHIHTMT 62 (427)
Q Consensus 5 ~~~~v~~~~~~~~~~r-~~~~a~~La~~~g~~V~vi~~~~~~~~~--------~~~~~~~i~v~~~~ 62 (427)
+++++++.++....++ +...+..|.+. |..|++|+.+...... .....++-++.++|
T Consensus 108 ~rivi~v~S~~~~d~~~i~~~~~~lkk~-~I~v~vI~~G~~~~~~~~l~~~~~~~~~~~~s~~~~~~ 173 (187)
T cd01452 108 QRIVAFVGSPIEEDEKDLVKLAKRLKKN-NVSVDIINFGEIDDNTEKLTAFIDAVNGKDGSHLVSVP 173 (187)
T ss_pred ceEEEEEecCCcCCHHHHHHHHHHHHHc-CCeEEEEEeCCCCCCHHHHHHHHHHhcCCCCceEEEeC
Confidence 4777777776565554 44666777775 9999999987543221 12223467888887
No 304
>PRK06436 glycerate dehydrogenase; Provisional
Probab=23.07 E-value=3e+02 Score=27.11 Aligned_cols=84 Identities=13% Similarity=0.055 Sum_probs=53.3
Q ss_pred CCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCC-------CcccHHHHHhcCcEEEee--ccCCCCCCCchHHHHHH
Q 014316 315 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWL-------SAEDYPLLLGSADLGVCL--HTSSSGLDLPMKVVDMF 385 (427)
Q Consensus 315 ~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~-------~~~~~~~~l~~adi~v~p--~~~s~~e~~p~~~lEam 385 (427)
..-++-|+|-|.--..+.+.++.+|.+ |....... ...++.++++.||+.++. .+.....-+.-..++.|
T Consensus 121 ~gktvgIiG~G~IG~~vA~~l~afG~~-V~~~~r~~~~~~~~~~~~~l~ell~~aDiv~~~lp~t~~T~~li~~~~l~~m 199 (303)
T PRK06436 121 YNKSLGILGYGGIGRRVALLAKAFGMN-IYAYTRSYVNDGISSIYMEPEDIMKKSDFVLISLPLTDETRGMINSKMLSLF 199 (303)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCE-EEEECCCCcccCcccccCCHHHHHhhCCEEEECCCCCchhhcCcCHHHHhcC
Confidence 356788999987666666677776652 32222100 134788999999999872 11122234566889999
Q ss_pred cCCCcEEEeccCcc
Q 014316 386 GCGLPVCAVSYSCI 399 (427)
Q Consensus 386 a~G~PVIas~~~g~ 399 (427)
--|.-+|-+..|++
T Consensus 200 k~ga~lIN~sRG~~ 213 (303)
T PRK06436 200 RKGLAIINVARADV 213 (303)
T ss_pred CCCeEEEECCCccc
Confidence 88877776665553
No 305
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=23.04 E-value=2.5e+02 Score=27.21 Aligned_cols=40 Identities=18% Similarity=0.214 Sum_probs=26.9
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCC---cccccCCCceEEEEee
Q 014316 22 QYQALSLARQMSLEVDVVAYGGSKP---HAAILEHPSIHIHTMT 62 (427)
Q Consensus 22 ~~~a~~La~~~g~~V~vi~~~~~~~---~~~~~~~~~i~v~~~~ 62 (427)
...|..||++ ||+|.+++-..++- ..++.+..++.+..++
T Consensus 20 ~~~A~~lA~~-g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~ 62 (265)
T COG0300 20 AELAKQLARR-GYNLILVARREDKLEALAKELEDKTGVEVEVIP 62 (265)
T ss_pred HHHHHHHHHC-CCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEE
Confidence 3457899997 99999999665431 2233444567777776
No 306
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=23.03 E-value=1.6e+02 Score=23.97 Aligned_cols=25 Identities=40% Similarity=0.716 Sum_probs=19.0
Q ss_pred CCCEEEEEEeCCC--ChHHHHHHHHHc
Q 014316 314 YPRLLFIITGKGP--DKESYEEKIRRL 338 (427)
Q Consensus 314 ~~~~~l~i~G~G~--~~~~~~~~~~~l 338 (427)
+|+.+|+++||.. |.+-+.+.+++.
T Consensus 62 fP~~kfiLIGDsgq~DpeiY~~ia~~~ 88 (100)
T PF09949_consen 62 FPERKFILIGDSGQHDPEIYAEIARRF 88 (100)
T ss_pred CCCCcEEEEeeCCCcCHHHHHHHHHHC
Confidence 8999999999753 445567777775
No 307
>TIGR03837 efp_adjacent_2 conserved hypothetical protein, PP_1857 family. This model describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=22.84 E-value=8.2e+02 Score=24.94 Aligned_cols=47 Identities=30% Similarity=0.371 Sum_probs=38.8
Q ss_pred cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC
Q 014316 342 RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 342 ~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~ 397 (427)
.+..+.+ ++++++..+|..||+-++ .+|. +.+=|.-+|+|.|=--++
T Consensus 243 ~~~~LPf-~~Q~~yD~LLW~cD~NfV-----RGED---SFVRAqWAgkPfvWhIYP 289 (371)
T TIGR03837 243 TVAVLPF-VPQDDYDRLLWACDLNFV-----RGED---SFVRAQWAGKPFVWHIYP 289 (371)
T ss_pred EEEEcCC-CChhhHHHHHHhChhcEe-----echh---HHHHHHHcCCCceeeccc
Confidence 4888998 999999999999999984 4454 489999999999865443
No 308
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=22.83 E-value=2.6e+02 Score=25.64 Aligned_cols=50 Identities=18% Similarity=0.185 Sum_probs=28.2
Q ss_pred EEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEee
Q 014316 10 VVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62 (427)
Q Consensus 10 ~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~ 62 (427)
.+.|..|..++- .+..|.+. +|+|.+++...+..........|+++....
T Consensus 2 ~V~GatG~~G~~--v~~~L~~~-~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d 51 (233)
T PF05368_consen 2 LVTGATGNQGRS--VVRALLSA-GFSVRALVRDPSSDRAQQLQALGAEVVEAD 51 (233)
T ss_dssp EEETTTSHHHHH--HHHHHHHT-TGCEEEEESSSHHHHHHHHHHTTTEEEES-
T ss_pred EEECCccHHHHH--HHHHHHhC-CCCcEEEEeccchhhhhhhhcccceEeecc
Confidence 444544443332 34566665 999999997653322333344578777665
No 309
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=22.74 E-value=3.1e+02 Score=28.06 Aligned_cols=85 Identities=14% Similarity=0.012 Sum_probs=56.6
Q ss_pred CCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecC-------CCCcccHHHHHhcCcEEEe--eccCC----CCCCCchH
Q 014316 314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTM-------WLSAEDYPLLLGSADLGVC--LHTSS----SGLDLPMK 380 (427)
Q Consensus 314 ~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~-------~~~~~~~~~~l~~adi~v~--p~~~s----~~e~~p~~ 380 (427)
..+-++-|+|-|.--..+.+.++.+|.+ |..... -....++.++++.||+.++ |.+.+ ..--+.-.
T Consensus 114 l~gktvGIIG~G~IG~~va~~l~a~G~~-V~~~Dp~~~~~~~~~~~~~l~ell~~aDiV~lh~Plt~~g~~~T~~li~~~ 192 (381)
T PRK00257 114 LAERTYGVVGAGHVGGRLVRVLRGLGWK-VLVCDPPRQEAEGDGDFVSLERILEECDVISLHTPLTKEGEHPTRHLLDEA 192 (381)
T ss_pred cCcCEEEEECCCHHHHHHHHHHHHCCCE-EEEECCcccccccCccccCHHHHHhhCCEEEEeCcCCCCccccccccCCHH
Confidence 3456789999997667777777777763 333221 0123468899999999976 32221 11335567
Q ss_pred HHHHHcCCCcEEEeccCcc
Q 014316 381 VVDMFGCGLPVCAVSYSCI 399 (427)
Q Consensus 381 ~lEama~G~PVIas~~~g~ 399 (427)
.++.|--|.-+|.+.-|++
T Consensus 193 ~l~~mk~gailIN~aRG~v 211 (381)
T PRK00257 193 FLASLRPGAWLINASRGAV 211 (381)
T ss_pred HHhcCCCCeEEEECCCCcc
Confidence 8999999988888877664
No 310
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=22.47 E-value=6e+02 Score=23.20 Aligned_cols=66 Identities=14% Similarity=0.111 Sum_probs=40.3
Q ss_pred HHHHHHHHHcCCCc-EEEecCCCCcccHHHHH-----hcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC
Q 014316 329 ESYEEKIRRLRLKR-VAFRTMWLSAEDYPLLL-----GSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 329 ~~~~~~~~~l~l~~-V~f~g~~~~~~~~~~~l-----~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~ 397 (427)
..+++.++++|.+- +.+... -+.+...+.+ +..|..++-+ ...+.+...+-++...|+|||+.+.+
T Consensus 18 ~g~~~~a~~~g~~~~~~~~~~-~d~~~q~~~i~~~i~~~~d~Iiv~~--~~~~~~~~~l~~~~~~gIpvv~~d~~ 89 (257)
T PF13407_consen 18 KGAKAAAKELGYEVEIVFDAQ-NDPEEQIEQIEQAISQGVDGIIVSP--VDPDSLAPFLEKAKAAGIPVVTVDSD 89 (257)
T ss_dssp HHHHHHHHHHTCEEEEEEEST-TTHHHHHHHHHHHHHTTESEEEEES--SSTTTTHHHHHHHHHTTSEEEEESST
T ss_pred HHHHHHHHHcCCEEEEeCCCC-CCHHHHHHHHHHHHHhcCCEEEecC--CCHHHHHHHHHHHhhcCceEEEEecc
Confidence 34567778888763 323343 3443333333 3568776532 33344666788899999999998877
No 311
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=22.31 E-value=2.1e+02 Score=27.32 Aligned_cols=43 Identities=14% Similarity=0.137 Sum_probs=30.5
Q ss_pred cccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC
Q 014316 352 AEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 352 ~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~ 397 (427)
.+++.+++..+|+++-. +..+...-.+..++.+|+|++....|
T Consensus 51 ~~dl~~ll~~~DvVid~---t~p~~~~~~~~~al~~G~~vvigttG 93 (257)
T PRK00048 51 TDDLEAVLADADVLIDF---TTPEATLENLEFALEHGKPLVIGTTG 93 (257)
T ss_pred cCCHHHhccCCCEEEEC---CCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 46777788889999853 33333445678899999999976443
No 312
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=22.14 E-value=3.1e+02 Score=26.83 Aligned_cols=33 Identities=12% Similarity=0.290 Sum_probs=20.4
Q ss_pred HHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEE
Q 014316 23 YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60 (427)
Q Consensus 23 ~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~ 60 (427)
..+..|++. ||+|++++... . +.....++++..
T Consensus 19 ~lA~~L~~~-g~~V~~~~r~~---~-~~~~~~g~~~~~ 51 (313)
T PRK06249 19 FYGAMLARA-GFDVHFLLRSD---Y-EAVRENGLQVDS 51 (313)
T ss_pred HHHHHHHHC-CCeEEEEEeCC---H-HHHHhCCeEEEe
Confidence 345677885 99999998643 1 223344665543
No 313
>PF00533 BRCT: BRCA1 C Terminus (BRCT) domain; InterPro: IPR001357 The BRCT domain (after the C_terminal domain of a breast cancer susceptibility protein) is found predominantly in proteins involved in cell cycle checkpoint functions responsive to DNA damage [], for example as found in the breast cancer DNA-repair protein BRCA1. The domain is an approximately 100 amino acid tandem repeat, which appears to act as a phospho-protein binding domain []. A chitin biosynthesis protein from yeast also seems to belong to this group. ; GO: 0005622 intracellular; PDB: 3L46_A 3AL3_A 3AL2_A 1WF6_A 3II6_X 2NTE_B 3FA2_A 2R1Z_A 2COK_A 2K7F_A ....
Probab=22.09 E-value=1.4e+02 Score=21.88 Aligned_cols=66 Identities=14% Similarity=0.185 Sum_probs=43.6
Q ss_pred CCCEEEEEEe-CCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEE
Q 014316 314 YPRLLFIITG-KGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC 392 (427)
Q Consensus 314 ~~~~~l~i~G-~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVI 392 (427)
..+..|.+.| +...++.++++++++|- .+. ..+-...+.+|+. ....-..+..++.+.|+|+|
T Consensus 6 F~g~~f~i~~~~~~~~~~l~~~i~~~GG---~v~---------~~~~~~~thvI~~----~~~~~~~k~~~~~~~~i~iV 69 (78)
T PF00533_consen 6 FEGCTFCISGFDSDEREELEQLIKKHGG---TVS---------NSFSKKTTHVIVG----NPNKRTKKYKAAIANGIPIV 69 (78)
T ss_dssp TTTEEEEESSTSSSHHHHHHHHHHHTTE---EEE---------SSSSTTSSEEEES----SSHCCCHHHHHHHHTTSEEE
T ss_pred CCCEEEEEccCCCCCHHHHHHHHHHcCC---EEE---------eecccCcEEEEeC----CCCCccHHHHHHHHCCCeEe
Confidence 5578888844 34556788999999872 111 1224567777763 21224458999999999999
Q ss_pred Eec
Q 014316 393 AVS 395 (427)
Q Consensus 393 as~ 395 (427)
..+
T Consensus 70 ~~~ 72 (78)
T PF00533_consen 70 SPD 72 (78)
T ss_dssp ETH
T ss_pred cHH
Confidence 754
No 314
>COG2247 LytB Putative cell wall-binding domain [Cell envelope biogenesis, outer membrane]
Probab=21.89 E-value=3.1e+02 Score=27.36 Aligned_cols=76 Identities=18% Similarity=0.263 Sum_probs=47.5
Q ss_pred CCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcc----cHHH--------HHhcCcEEEeeccCCCCCCCchHH
Q 014316 314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAE----DYPL--------LLGSADLGVCLHTSSSGLDLPMKV 381 (427)
Q Consensus 314 ~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~----~~~~--------~l~~adi~v~p~~~s~~e~~p~~~ 381 (427)
.|+..++|-|.-.-.+.+++..+++|.+=++. |+ -++- .+.. .++...++|+ ++-.++-++
T Consensus 75 npd~VLIIGGp~AVs~~yE~~Lks~GitV~Ri-gG-~nR~ETa~~v~~~~~~~yp~af~n~kvvvv-----~GwDy~~~~ 147 (337)
T COG2247 75 NPDLVLIIGGPIAVSPNYENALKSLGITVKRI-GG-ANRYETAEKVAKFFREDYPNAFKNVKVVVV-----YGWDYADAL 147 (337)
T ss_pred CCceEEEECCCCcCChhHHHHHHhCCcEEEEe-cC-cchHHHHHHHHHHHHhhchhhhcCeEEEEE-----eccccHHHH
Confidence 78877777665555577888999988764444 43 2322 2223 3334345554 233345599
Q ss_pred HHHHcCCC-cEEEecc
Q 014316 382 VDMFGCGL-PVCAVSY 396 (427)
Q Consensus 382 lEama~G~-PVIas~~ 396 (427)
.|+|--|+ ||+.++.
T Consensus 148 ~e~~k~~~~p~~~~n~ 163 (337)
T COG2247 148 MELMKEGIVPVILKNT 163 (337)
T ss_pred HHHHhcCcceeEeccc
Confidence 99999998 7777764
No 315
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=21.82 E-value=3.7e+02 Score=23.16 Aligned_cols=41 Identities=17% Similarity=0.161 Sum_probs=24.5
Q ss_pred EEEEeCCC-----ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhc
Q 014316 319 FIITGKGP-----DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS 361 (427)
Q Consensus 319 l~i~G~G~-----~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~ 361 (427)
.+++|.++ +.+..++.++++|.+.|--.| -+.+++.+++..
T Consensus 85 ~vivGG~~vi~~~d~~~~~~~l~~~Gv~~vF~pg--t~~~~iv~~l~~ 130 (134)
T TIGR01501 85 LLYVGGNLVVGKQDFPDVEKRFKEMGFDRVFAPG--TPPEVVIADLKK 130 (134)
T ss_pred EEEecCCcCcChhhhHHHHHHHHHcCCCEEECcC--CCHHHHHHHHHH
Confidence 36666642 222345577889987664444 467777777654
No 316
>PRK09212 pyruvate dehydrogenase subunit beta; Validated
Probab=21.76 E-value=3.6e+02 Score=26.77 Aligned_cols=104 Identities=10% Similarity=-0.032 Sum_probs=64.2
Q ss_pred EEEEEEeCCCChHHHHHHHHHc---CCC----cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCC-
Q 014316 317 LLFIITGKGPDKESYEEKIRRL---RLK----RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCG- 388 (427)
Q Consensus 317 ~~l~i~G~G~~~~~~~~~~~~l---~l~----~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G- 388 (427)
..+.|++.|.......+.++.| |++ ++.++-. ++.+.+.+.++.++.++........-|++..+.|.++..
T Consensus 202 ~di~iva~G~~~~~a~eAa~~L~~~Gi~v~vi~~~~l~P-ld~~~i~~~~~~~~~vv~vEe~~~~gGlg~~la~~l~~~~ 280 (327)
T PRK09212 202 SDVTIVTFSIQVKLALEAAELLEKEGISVEVIDLRTLRP-LDTETIIESVKKTNRLVVVEEGWPFAGVGAEIAALIMKEA 280 (327)
T ss_pred CCEEEEEccHHHHHHHHHHHHHHhcCCcEEEEEEecCCC-CCHHHHHHHHHhCCeEEEEcCCCCCCCHHHHHHHHHHHhC
Confidence 3567778887766665555544 443 3556555 677789999999988887544444478899999998754
Q ss_pred -----CcEEEeccCccccceecCCcEEE-----eCChHHHHHHHHHhc
Q 014316 389 -----LPVCAVSYSCIEELVKVDKNGLL-----FSSSSELADQLLVNA 426 (427)
Q Consensus 389 -----~PVIas~~~g~~e~v~~~~~G~l-----~~~~~~la~~l~~~~ 426 (427)
.|+.-- ++....+. .|.+ ..+.+.+++++.++.
T Consensus 281 ~~~~~~~i~r~--~~~~~~~~---~~~~le~~~l~~~~~I~~~i~~~~ 323 (327)
T PRK09212 281 FDYLDAPVERV--TGKDVPLP---YAANLEKLALPSEEDIIEAVKKVC 323 (327)
T ss_pred ccccCCCeEEE--cCCCccCC---chHHHHHhcCCCHHHHHHHHHHHH
Confidence 244433 22222221 1111 136778888877653
No 317
>PLN02683 pyruvate dehydrogenase E1 component subunit beta
Probab=21.60 E-value=2.6e+02 Score=28.25 Aligned_cols=104 Identities=7% Similarity=-0.041 Sum_probs=62.1
Q ss_pred EEEEEeCCCChHHHHHHHHHc---CCC----cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCC--
Q 014316 318 LFIITGKGPDKESYEEKIRRL---RLK----RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCG-- 388 (427)
Q Consensus 318 ~l~i~G~G~~~~~~~~~~~~l---~l~----~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G-- 388 (427)
.+.|++.|..-....+.++.| |++ ++.++-. ++.+.+.+..+..+.++........-|||..+.|.++-.
T Consensus 230 dvtIia~G~~v~~Al~Aa~~L~~~GI~v~VId~~~ikP-lD~~~l~~~~~~t~~vvtvEE~~~~GGlGs~Va~~l~e~~f 308 (356)
T PLN02683 230 DVTIVAFSKMVGYALKAAEILAKEGISAEVINLRSIRP-LDRDTINASVRKTNRLVTVEEGWPQHGVGAEICASVVEESF 308 (356)
T ss_pred CEEEEEccHHHHHHHHHHHHHHhcCCCEEEEECCCCCc-cCHHHHHHHHhhcCeEEEEeCCCcCCCHHHHHHHHHHHhch
Confidence 456666776555555444443 553 2444444 567778888888888776544444478999999988654
Q ss_pred ----CcEEEeccCcc----ccceecCCcEEEeCChHHHHHHHHHhc
Q 014316 389 ----LPVCAVSYSCI----EELVKVDKNGLLFSSSSELADQLLVNA 426 (427)
Q Consensus 389 ----~PVIas~~~g~----~e~v~~~~~G~l~~~~~~la~~l~~~~ 426 (427)
.|+.--..... .+.++ -+.+.+++.+++++.+++
T Consensus 309 ~~~~~~v~rlg~~d~~~p~~~~le----~~~~p~~~~i~~a~~~~~ 350 (356)
T PLN02683 309 DYLDAPVERIAGADVPMPYAANLE----RLALPQVEDIVRAAKRAC 350 (356)
T ss_pred hccCCCeEEeccCCcCCCccHHHH----HhhCCCHHHHHHHHHHHH
Confidence 35543322221 11111 123467888888887764
No 318
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=21.48 E-value=4.5e+02 Score=25.38 Aligned_cols=59 Identities=14% Similarity=0.031 Sum_probs=36.7
Q ss_pred HHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCC-CCCchHHHHHHcCCCcEEEec
Q 014316 330 SYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG-LDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 330 ~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~-e~~p~~~lEama~G~PVIas~ 395 (427)
.+++..+++|+.-++ ...+.+++..+...+|++-.+ |.. +.++ -+-++-..|+||+.++
T Consensus 82 ~l~~~~~~~Gl~~~t---e~~d~~~~~~l~~~vd~~kIg---a~~~~n~~-LL~~~a~~gkPV~lk~ 141 (266)
T PRK13398 82 ILKEVGDKYNLPVVT---EVMDTRDVEEVADYADMLQIG---SRNMQNFE-LLKEVGKTKKPILLKR 141 (266)
T ss_pred HHHHHHHHcCCCEEE---eeCChhhHHHHHHhCCEEEEC---cccccCHH-HHHHHhcCCCcEEEeC
Confidence 456666777765322 224566677666778988775 322 4443 3445556799999887
No 319
>PLN02306 hydroxypyruvate reductase
Probab=21.44 E-value=3.2e+02 Score=27.98 Aligned_cols=85 Identities=9% Similarity=0.111 Sum_probs=53.2
Q ss_pred CCCEEEEEEeCCCChHHHHHHH-HHcCCCcEEEecCCC--------------------------CcccHHHHHhcCcEEE
Q 014316 314 YPRLLFIITGKGPDKESYEEKI-RRLRLKRVAFRTMWL--------------------------SAEDYPLLLGSADLGV 366 (427)
Q Consensus 314 ~~~~~l~i~G~G~~~~~~~~~~-~~l~l~~V~f~g~~~--------------------------~~~~~~~~l~~adi~v 366 (427)
...-++-|+|-|.--..+.+.+ +.+|. +|....... ...++.++++.||+++
T Consensus 163 L~gktvGIiG~G~IG~~vA~~l~~~fGm-~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~L~ell~~sDiV~ 241 (386)
T PLN02306 163 LKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWKRASSMEEVLREADVIS 241 (386)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCC-EEEEECCCCchhhhhhhhhhcccccccccccccccccCCHHHHHhhCCEEE
Confidence 3456788999886555554444 24443 444333211 1247899999999997
Q ss_pred e--eccCCCCCCCchHHHHHHcCCCcEEEeccCcc
Q 014316 367 C--LHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI 399 (427)
Q Consensus 367 ~--p~~~s~~e~~p~~~lEama~G~PVIas~~~g~ 399 (427)
+ |.+.....-+.-..++.|--|.-+|-+.-|++
T Consensus 242 lh~Plt~~T~~lin~~~l~~MK~ga~lIN~aRG~l 276 (386)
T PLN02306 242 LHPVLDKTTYHLINKERLALMKKEAVLVNASRGPV 276 (386)
T ss_pred EeCCCChhhhhhcCHHHHHhCCCCeEEEECCCccc
Confidence 6 22222223456688999998888888877664
No 320
>cd01967 Nitrogenase_MoFe_alpha_like Nitrogenase_MoFe_alpha_like: Nitrogenase MoFe protein, alpha subunit_like. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. Three genetically distinct types of nitrogenase systems are known to exist: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase). These nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). This group contains the alpha subunit of component 1 of all three different forms. The most widespread and best characterized of these systems is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers having alpha and beta subunits similar to the alpha and beta subunits of MoFe. The role of the delta subunit is unknown. For MoFe, each alphabeta pair of subunits contains one
Probab=21.40 E-value=3.4e+02 Score=27.58 Aligned_cols=72 Identities=15% Similarity=0.128 Sum_probs=45.9
Q ss_pred EEEEEEeCC---CChHHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHc--CCCc
Q 014316 317 LLFIITGKG---PDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFG--CGLP 390 (427)
Q Consensus 317 ~~l~i~G~G---~~~~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama--~G~P 390 (427)
-.+.|+|.- .+..+++++.+++|++ +..|.+. -+.+++.. +..|.+-++. +.. ++....++|. .|+|
T Consensus 161 ~~VNiig~~~~~~d~~el~~lL~~~Gi~~~~~~~~~-~~~~~i~~-~~~A~~niv~---~~~--~~~~~a~~L~~r~GiP 233 (406)
T cd01967 161 YDVNIIGEYNIGGDAWVIKPLLEELGIRVNATFTGD-GTVDELRR-AHRAKLNLVH---CSR--SMNYLAREMEERYGIP 233 (406)
T ss_pred CeEEEEeccccchhHHHHHHHHHHcCCEEEEEeCCC-CCHHHHhh-CccCCEEEEE---ChH--HHHHHHHHHHHhhCCC
Confidence 456666742 2557899999999997 6777765 67788877 5666655543 211 2334444443 7999
Q ss_pred EEEec
Q 014316 391 VCAVS 395 (427)
Q Consensus 391 VIas~ 395 (427)
.+...
T Consensus 234 ~~~~~ 238 (406)
T cd01967 234 YMEVN 238 (406)
T ss_pred EEEec
Confidence 98644
No 321
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=21.38 E-value=5.5e+02 Score=26.44 Aligned_cols=87 Identities=13% Similarity=0.167 Sum_probs=50.0
Q ss_pred CCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCC---------------CCcccHHHHHhcCcEEEeeccCCCCCCCch
Q 014316 315 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMW---------------LSAEDYPLLLGSADLGVCLHTSSSGLDLPM 379 (427)
Q Consensus 315 ~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~---------------~~~~~~~~~l~~adi~v~p~~~s~~e~~p~ 379 (427)
++-++.++|.|+.-...-..+...|..+|...+.- ++.++..+.+..+|+++.. +++..--+..
T Consensus 181 ~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aDvVI~a-T~s~~~~i~~ 259 (423)
T PRK00045 181 SGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGEAIPLDELPEALAEADIVISS-TGAPHPIIGK 259 (423)
T ss_pred cCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCcEeeHHHHHHHhccCCEEEEC-CCCCCcEEcH
Confidence 45678888988765554445555565555554430 1223455667889999974 2222222333
Q ss_pred HHHHHHcC---CCcEEEeccCccccc
Q 014316 380 KVVDMFGC---GLPVCAVSYSCIEEL 402 (427)
Q Consensus 380 ~~lEama~---G~PVIas~~~g~~e~ 402 (427)
..++.+.. +.|.+..|.+..+++
T Consensus 260 ~~l~~~~~~~~~~~~vviDla~Prdi 285 (423)
T PRK00045 260 GMVERALKARRHRPLLLVDLAVPRDI 285 (423)
T ss_pred HHHHHHHhhccCCCeEEEEeCCCCCC
Confidence 44555432 467888887765554
No 322
>PF11238 DUF3039: Protein of unknown function (DUF3039); InterPro: IPR021400 This family of proteins with unknown function appears to be restricted to Actinobacteria.
Probab=21.23 E-value=69 Score=23.42 Aligned_cols=16 Identities=31% Similarity=0.391 Sum_probs=14.1
Q ss_pred hHHHHHHcCCCcEEEe
Q 014316 379 MKVVDMFGCGLPVCAV 394 (427)
Q Consensus 379 ~~~lEama~G~PVIas 394 (427)
.++.|++.+|.||+|-
T Consensus 15 ~kI~esav~G~pVvAL 30 (58)
T PF11238_consen 15 DKIAESAVMGTPVVAL 30 (58)
T ss_pred hHHHHHHhcCceeEee
Confidence 3799999999999984
No 323
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=21.19 E-value=3e+02 Score=22.09 Aligned_cols=68 Identities=16% Similarity=0.143 Sum_probs=43.0
Q ss_pred CCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHh--cCcEEEeeccCCCCCCCchHHHHHHcCCCcEE
Q 014316 315 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG--SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC 392 (427)
Q Consensus 315 ~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~--~adi~v~p~~~s~~e~~p~~~lEama~G~PVI 392 (427)
++..+.-+ -+++.+..++.+++++.. . ..++.+++. ..|+++.. +....=.-.+.+++..|++|+
T Consensus 24 ~~~~v~~v-~d~~~~~~~~~~~~~~~~--~-------~~~~~~ll~~~~~D~V~I~---tp~~~h~~~~~~~l~~g~~v~ 90 (120)
T PF01408_consen 24 PDFEVVAV-CDPDPERAEAFAEKYGIP--V-------YTDLEELLADEDVDAVIIA---TPPSSHAEIAKKALEAGKHVL 90 (120)
T ss_dssp TTEEEEEE-ECSSHHHHHHHHHHTTSE--E-------ESSHHHHHHHTTESEEEEE---SSGGGHHHHHHHHHHTTSEEE
T ss_pred CCcEEEEE-EeCCHHHHHHHHHHhccc--c-------hhHHHHHHHhhcCCEEEEe---cCCcchHHHHHHHHHcCCEEE
Confidence 55644322 344566777778887754 2 344567777 68888774 222223346889999999998
Q ss_pred Eec
Q 014316 393 AVS 395 (427)
Q Consensus 393 as~ 395 (427)
.-.
T Consensus 91 ~EK 93 (120)
T PF01408_consen 91 VEK 93 (120)
T ss_dssp EES
T ss_pred EEc
Confidence 764
No 324
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=21.03 E-value=5.6e+02 Score=22.36 Aligned_cols=113 Identities=15% Similarity=0.085 Sum_probs=56.9
Q ss_pred EEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCc-ccccCCCce-EEEEeecCCCCCCCCcchhhHHHHHHHHH
Q 014316 8 CVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPH-AAILEHPSI-HIHTMTQWPTIPRGLPKVLKPVLLLLKPL 85 (427)
Q Consensus 8 ~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~-~~~~~~~~i-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (427)
.|+.-..-|........+...+++.|-+|++++.+..... .......|. +++.+.. ...... ........+...+
T Consensus 3 lV~~E~~~g~l~~~s~el~~~A~~l~~~v~~v~~G~~~~~~~~~~~~~Gad~v~~~~~--~~~~~~-~~~~~a~al~~~i 79 (168)
T cd01715 3 LVLAEHRNGELRELTLEAVTAARKLGGEVTALVIGSGAEAVAAALKAYGADKVLVAED--PALAHY-LAEPYAPALVALA 79 (168)
T ss_pred EEEEEecCCChHHHHHHHHHHHHHhCCCEEEEEECCChHHHHHHHHhcCCCEEEEecC--hhhccc-ChHHHHHHHHHHH
Confidence 4444434455556666777777775457888886643211 111112244 5555541 111100 0111112222222
Q ss_pred HHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEeccc
Q 014316 86 IQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNF 137 (427)
Q Consensus 86 ~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~ 137 (427)
+..+||+|++-+... +--++..++...+.+++-++-+.
T Consensus 80 ------------~~~~p~~Vl~~~t~~--g~~la~rlAa~L~~~~vtdv~~l 117 (168)
T cd01715 80 ------------KKEKPSHILAGATSF--GKDLAPRVAAKLDVGLISDVTAL 117 (168)
T ss_pred ------------HhcCCCEEEECCCcc--ccchHHHHHHHhCCCceeeEEEE
Confidence 226799998876332 22334555556689988877665
No 325
>PRK11519 tyrosine kinase; Provisional
Probab=20.98 E-value=1e+03 Score=26.51 Aligned_cols=33 Identities=15% Similarity=0.272 Sum_probs=22.3
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEE
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVD 133 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~ 133 (427)
.++|+|++.+||.....- +..++...+..+++.
T Consensus 634 ~~yD~ViiDtpP~~~v~D-a~~l~~~~d~~l~Vv 666 (719)
T PRK11519 634 KNYDLVLIDTPPILAVTD-AAIVGRHVGTTLMVA 666 (719)
T ss_pred hcCCEEEEeCCCcccchH-HHHHHHHCCeEEEEE
Confidence 689999999988765433 445566666555443
No 326
>PF00551 Formyl_trans_N: Formyl transferase; InterPro: IPR002376 A number of formyl transferases belong to this group. Methionyl-tRNA formyltransferase transfers a formyl group onto the amino terminus of the acyl moiety of the methionyl aminoacyl-tRNA. The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and by impairing its binding to EFTU-GTP. Formyltetrahydrofolate dehydrogenase produces formate from formyl- tetrahydrofolate. This is the N-terminal domain of these enzymes and is found upstream of the C-terminal domain (IPR005793 from INTERPRO). The trifunctional glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide synthetase-glycinamide ribonucleotide transformylase catalyses the second, third and fifth steps in de novo purine biosynthesis. The glycinamide ribonucleotide transformylase belongs to this group.; GO: 0016742 hydroxymethyl-, formyl- and related transferase activity, 0009058 biosynthetic process; PDB: 3P9X_B 3OBI_A 3R8X_A 3KCQ_C 3RFO_D 3AV3_A 3N0V_D 3LOU_A 3O1L_A 4DS3_A ....
Probab=20.90 E-value=4.2e+02 Score=23.61 Aligned_cols=10 Identities=30% Similarity=0.674 Sum_probs=7.8
Q ss_pred CCCcEEEEcC
Q 014316 100 ASPDVFLVQN 109 (427)
Q Consensus 100 ~~~Dvv~~~~ 109 (427)
.+||++++-+
T Consensus 78 ~~~Dl~v~~~ 87 (181)
T PF00551_consen 78 LNPDLIVVAG 87 (181)
T ss_dssp TT-SEEEESS
T ss_pred hccceeehhh
Confidence 8999998876
No 327
>PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional
Probab=20.90 E-value=7e+02 Score=23.86 Aligned_cols=103 Identities=15% Similarity=0.066 Sum_probs=52.3
Q ss_pred CChhHHHHHHHHHhhCCCcEEEEecCCCCC--cccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHH
Q 014316 17 RSPRMQYQALSLARQMSLEVDVVAYGGSKP--HAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWF 94 (427)
Q Consensus 17 ~~~r~~~~a~~La~~~g~~V~vi~~~~~~~--~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (427)
.++++...+.+|.+. ++|+|+++..++- ...+.-...++++.+. .. .......+-. ...-.+..
T Consensus 12 ~a~Gi~aL~~~l~~~--~~V~VvAP~~~qSg~g~ait~~~pl~~~~~~--~~-~~~v~GTPaD--cV~~gl~~------- 77 (250)
T PRK00346 12 HAPGIRALAEALREL--ADVTVVAPDRERSGASHSLTLTRPLRVEKVD--NG-FYAVDGTPTD--CVHLALNG------- 77 (250)
T ss_pred CChhHHHHHHHHHhC--CCEEEEeCCCCCcCCcccccCCCCeEEEEec--CC-eEEECCcHHH--HHHHHHHh-------
Confidence 568888888888774 6999999875431 1122223345555553 11 1101111111 11111111
Q ss_pred HHhhhCCCcEEEEcCC--------CChhHHHHHHHHHhhcCCcEEEEec
Q 014316 95 LCVKIASPDVFLVQNP--------PSVPTLVAVKWASSLRRSAFIVDWH 135 (427)
Q Consensus 95 ~~~~~~~~Dvv~~~~p--------~~~~~~~~~~~~~~~~~~p~i~~~h 135 (427)
++ ..+||+|++--. -...+.+.+.+-+.+.|+|-|.-..
T Consensus 78 l~--~~~pDlVvSGIN~G~N~g~~v~ySGTVgAA~ea~~~GiPaiA~S~ 124 (250)
T PRK00346 78 LL--DPKPDLVVSGINHGANLGDDVLYSGTVAAAMEGALLGIPAIAVSL 124 (250)
T ss_pred hc--cCCCCEEEeCCccCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 11 157999986410 1123344455666778999776544
No 328
>cd05005 SIS_PHI Hexulose-6-phosphate isomerase (PHI). PHI is a member of the SIS (Sugar ISomerase domain) superfamily. In the ribulose monophosphate pathway of formaldehyde fixation, hexulose-6-phosphate synthase catalyzes the condensation of ribulose-5-phosphate with formadelhyde to become hexulose-6-phosphate, which is then isomerized to fructose-6-phosphate by PHI.
Probab=20.86 E-value=3.1e+02 Score=24.27 Aligned_cols=73 Identities=16% Similarity=0.115 Sum_probs=41.3
Q ss_pred EEEEEeCCCChHHHHHHHHHcC-C-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 318 LFIITGKGPDKESYEEKIRRLR-L-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 318 ~l~i~G~G~~~~~~~~~~~~l~-l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
++.++|-|....-.+.+..++. + .++.+.+. .....+..-|+++....+......-..+-.|-..|.|+|+--
T Consensus 35 ~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~-----~~~~~~~~~D~vI~iS~sG~t~~~i~~~~~ak~~g~~iI~IT 109 (179)
T cd05005 35 RIFVYGAGRSGLVAKAFAMRLMHLGLNVYVVGE-----TTTPAIGPGDLLIAISGSGETSSVVNAAEKAKKAGAKVVLIT 109 (179)
T ss_pred eEEEEecChhHHHHHHHHHHHHhCCCeEEEeCC-----CCCCCCCCCCEEEEEcCCCCcHHHHHHHHHHHHCCCeEEEEE
Confidence 5788888865544444444442 1 24555543 112346778888875333333333334555677899998754
No 329
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=20.75 E-value=1.2e+02 Score=23.26 Aligned_cols=38 Identities=29% Similarity=0.114 Sum_probs=27.7
Q ss_pred ceEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCC
Q 014316 5 GRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGG 43 (427)
Q Consensus 5 ~~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~ 43 (427)
|-+++++.|-..-+.|+...|..|+++ |+.|...-..+
T Consensus 16 k~~v~i~HG~~eh~~ry~~~a~~L~~~-G~~V~~~D~rG 53 (79)
T PF12146_consen 16 KAVVVIVHGFGEHSGRYAHLAEFLAEQ-GYAVFAYDHRG 53 (79)
T ss_pred CEEEEEeCCcHHHHHHHHHHHHHHHhC-CCEEEEECCCc
Confidence 444555566555778899999999996 99988776444
No 330
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=20.74 E-value=6.8e+02 Score=23.18 Aligned_cols=107 Identities=12% Similarity=0.083 Sum_probs=50.6
Q ss_pred eEEEEEeCCCCCChhHHHHHHHHHhh-CCCcEEEEecCC-CCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHH
Q 014316 6 RACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGG-SKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLK 83 (427)
Q Consensus 6 ~~~v~~~~~~~~~~r~~~~a~~La~~-~g~~V~vi~~~~-~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (427)
+++|+..|..+ .++..+.+.... ...+|..+-.+. +-+--+.....||....+.....+ .+.- +=..+..
T Consensus 2 ki~VlaSG~GS---Nlqaiida~~~~~~~a~i~~Visd~~~A~~lerA~~~gIpt~~~~~k~~~----~r~~-~d~~l~~ 73 (200)
T COG0299 2 KIAVLASGNGS---NLQAIIDAIKGGKLDAEIVAVISDKADAYALERAAKAGIPTVVLDRKEFP----SREA-FDRALVE 73 (200)
T ss_pred eEEEEEeCCcc---cHHHHHHHHhcCCCCcEEEEEEeCCCCCHHHHHHHHcCCCEEEeccccCC----CHHH-HHHHHHH
Confidence 46666655332 344333443332 113444443333 333334455678887777621111 1110 1112222
Q ss_pred HHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEeccc
Q 014316 84 PLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNF 137 (427)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~ 137 (427)
.+. ..+||+|..-. +.-.+-..++....+ -|+.+|-.
T Consensus 74 ~l~------------~~~~dlvvLAG---yMrIL~~~fl~~~~g--rIlNIHPS 110 (200)
T COG0299 74 ALD------------EYGPDLVVLAG---YMRILGPEFLSRFEG--RILNIHPS 110 (200)
T ss_pred HHH------------hcCCCEEEEcc---hHHHcCHHHHHHhhc--ceEecCcc
Confidence 222 38999999987 333332444555555 26778854
No 331
>PRK14138 NAD-dependent deacetylase; Provisional
Probab=20.44 E-value=5.4e+02 Score=24.34 Aligned_cols=79 Identities=16% Similarity=0.096 Sum_probs=46.5
Q ss_pred cEEEecCCCCc---ccHHHHHhcCcEEEeeccCCCC-CCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe-CChH
Q 014316 342 RVAFRTMWLSA---EDYPLLLGSADLGVCLHTSSSG-LDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF-SSSS 416 (427)
Q Consensus 342 ~V~f~g~~~~~---~~~~~~l~~adi~v~p~~~s~~-e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~-~~~~ 416 (427)
+|.|.|-.++. ++..+....||++++. .+|.. +..-.-+..+...|.|++.-+.+... + +....+.. .+..
T Consensus 156 ~Vv~FgE~~p~~~~~~~~~~~~~aDl~lvi-GTSl~V~pa~~l~~~~~~~g~~~i~iN~~~t~--~-d~~~~~~i~~~~~ 231 (244)
T PRK14138 156 NIVFFGEALPQDALREAIRLSSKASLMIVM-GSSLVVYPAAELPLITVRSGGKLVIVNLGETP--L-DDIATLKYNMDVV 231 (244)
T ss_pred CEEECCCcCCHHHHHHHHHHHhcCCEEEEe-CcCCeeecHhHHHHHHHHcCCeEEEEcCCCCC--C-CcceeEEEeCCHH
Confidence 67777765654 3455777889999884 22322 33322334677789999988865433 2 12233444 6776
Q ss_pred HHHHHHHH
Q 014316 417 ELADQLLV 424 (427)
Q Consensus 417 ~la~~l~~ 424 (427)
+...+|..
T Consensus 232 ~~l~~l~~ 239 (244)
T PRK14138 232 EFANRVMS 239 (244)
T ss_pred HHHHHHHH
Confidence 66665543
No 332
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=20.11 E-value=5.3e+02 Score=24.69 Aligned_cols=37 Identities=8% Similarity=-0.032 Sum_probs=21.6
Q ss_pred CCCcEEEEcCCCChh-HHHHHHHHHhhcCCcEEEEecc
Q 014316 100 ASPDVFLVQNPPSVP-TLVAVKWASSLRRSAFIVDWHN 136 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~-~~~~~~~~~~~~~~p~i~~~h~ 136 (427)
.++|+|+--++|+-. ..-.+.-++...++|++--.+.
T Consensus 64 ~~i~~VIDAtHPfA~~is~~a~~a~~~~~ipylR~eR~ 101 (256)
T TIGR00715 64 HSIDILVDATHPFAAQITTNATAVCKELGIPYVRFERP 101 (256)
T ss_pred cCCCEEEEcCCHHHHHHHHHHHHHHHHhCCcEEEEECC
Confidence 789977666544321 1222344566779998765443
No 333
>PF13689 DUF4154: Domain of unknown function (DUF4154)
Probab=20.01 E-value=5.6e+02 Score=21.89 Aligned_cols=90 Identities=14% Similarity=0.142 Sum_probs=48.4
Q ss_pred CCCEEEEEEeCCCChHHHHHHHHH-cCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEE
Q 014316 314 YPRLLFIITGKGPDKESYEEKIRR-LRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC 392 (427)
Q Consensus 314 ~~~~~l~i~G~G~~~~~~~~~~~~-l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVI 392 (427)
...+++.+.|+.+..+.+.++..+ .+-..+...-. -+.++ ...||++.+ +..+.-...-+-.-..+.||+
T Consensus 25 ~~~~~icv~g~~~~~~~L~~l~~~~~~~~~i~v~~~-~~~~~----~~~C~ilyi----~~~~~~~~~~i~~~~~~~~vL 95 (145)
T PF13689_consen 25 SSPFRICVLGDDPFAEALSTLAGKQVGGRPIRVRRL-SSPNE----ISGCHILYI----SSSESSQLPEILRKLPGKPVL 95 (145)
T ss_pred CCCeEEEEECChHHHHHHHHhhhcccCCCcEEEEEC-CCCcc----cccccEEEE----CCCChHHHHHHHHhcCCCceE
Confidence 446999999988877777766322 12123444332 11223 588999987 433333222233344577777
Q ss_pred Eec-------cCcccccee-cCCcEEEe
Q 014316 393 AVS-------YSCIEELVK-VDKNGLLF 412 (427)
Q Consensus 393 as~-------~~g~~e~v~-~~~~G~l~ 412 (427)
+.. .||+-.++. +++-.|.+
T Consensus 96 tIsd~~~f~~~G~~I~l~~~~~rl~f~I 123 (145)
T PF13689_consen 96 TISDGEGFAEQGGMINLVREGNRLRFEI 123 (145)
T ss_pred EEECCCCccccCcEEEEEEECCEEEEEE
Confidence 643 344555554 33334444
Done!