Query 014316
Match_columns 427
No_of_seqs 157 out of 1857
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 09:22:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014316.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014316hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3okp_A GDP-mannose-dependent a 100.0 3.5E-37 1.2E-41 307.8 33.2 326 1-426 1-342 (394)
2 3c48_A Predicted glycosyltrans 100.0 1.2E-36 4E-41 309.6 36.5 342 3-425 19-388 (438)
3 3fro_A GLGA glycogen synthase; 100.0 2.1E-36 7.2E-41 306.1 35.3 348 4-426 2-393 (439)
4 2r60_A Glycosyl transferase, g 100.0 1.6E-35 5.3E-40 307.6 34.0 349 1-426 4-422 (499)
5 2jjm_A Glycosyl transferase, g 100.0 7.5E-35 2.6E-39 292.8 30.9 313 13-426 24-348 (394)
6 2gek_A Phosphatidylinositol ma 100.0 8.8E-35 3E-39 291.9 21.0 318 3-426 19-347 (406)
7 2iw1_A Lipopolysaccharide core 100.0 1.2E-34 4.2E-39 287.7 17.9 311 15-426 13-335 (374)
8 1rzu_A Glycogen synthase 1; gl 100.0 6.1E-34 2.1E-38 294.1 22.1 254 99-426 128-438 (485)
9 2qzs_A Glycogen synthase; glyc 100.0 1.3E-33 4.4E-38 291.7 22.6 253 100-426 128-439 (485)
10 3s28_A Sucrose synthase 1; gly 100.0 5.5E-33 1.9E-37 303.2 27.2 270 100-425 406-727 (816)
11 2x6q_A Trehalose-synthase TRET 100.0 1.1E-33 3.9E-38 286.2 18.9 240 99-425 124-376 (416)
12 2iuy_A Avigt4, glycosyltransfe 100.0 3.4E-33 1.2E-37 275.4 17.8 262 16-426 30-306 (342)
13 3oy2_A Glycosyltransferase B73 100.0 1.6E-30 5.5E-35 262.5 25.6 231 100-426 80-353 (413)
14 3vue_A GBSS-I, granule-bound s 100.0 1.1E-29 3.9E-34 267.1 31.4 256 100-425 152-474 (536)
15 1f0k_A MURG, UDP-N-acetylgluco 100.0 8.2E-29 2.8E-33 245.6 20.1 301 5-425 7-322 (364)
16 2x0d_A WSAF; GT4 family, trans 100.0 3.9E-29 1.3E-33 255.0 17.3 228 100-426 131-377 (413)
17 2hy7_A Glucuronosyltransferase 100.0 1.4E-28 4.7E-33 250.1 17.4 215 101-426 124-350 (406)
18 3beo_A UDP-N-acetylglucosamine 99.9 6.7E-27 2.3E-31 232.5 21.1 237 100-426 94-340 (375)
19 1vgv_A UDP-N-acetylglucosamine 99.9 3.3E-26 1.1E-30 228.4 16.2 240 100-425 85-339 (384)
20 2vsy_A XCC0866; transferase, g 99.9 2.8E-24 9.7E-29 226.1 15.2 223 100-426 281-520 (568)
21 2xci_A KDO-transferase, 3-deox 99.9 6.9E-23 2.4E-27 206.0 20.8 281 11-426 46-344 (374)
22 2bfw_A GLGA glycogen synthase; 99.9 3E-23 1E-27 188.6 15.5 133 260-426 38-178 (200)
23 1v4v_A UDP-N-acetylglucosamine 99.9 5.8E-23 2E-27 204.7 19.0 237 99-426 89-332 (376)
24 3nb0_A Glycogen [starch] synth 99.9 8.3E-22 2.8E-26 207.9 25.1 280 100-412 180-573 (725)
25 3qhp_A Type 1 capsular polysac 99.9 8.1E-23 2.8E-27 180.4 14.0 135 258-426 2-138 (166)
26 3rhz_A GTF3, nucleotide sugar 99.9 2.7E-22 9.1E-27 199.2 18.8 221 98-425 71-301 (339)
27 2f9f_A First mannosyl transfer 99.9 1.7E-22 5.9E-27 181.3 13.3 139 252-426 18-160 (177)
28 1uqt_A Alpha, alpha-trehalose- 99.9 3E-21 1E-25 200.3 21.6 244 100-426 122-417 (482)
29 3dzc_A UDP-N-acetylglucosamine 99.8 7.2E-19 2.5E-23 178.1 17.8 238 100-425 110-364 (396)
30 3t5t_A Putative glycosyltransf 99.8 1.9E-18 6.5E-23 178.6 19.3 243 101-425 149-435 (496)
31 3ot5_A UDP-N-acetylglucosamine 99.8 9.1E-18 3.1E-22 170.4 18.7 234 100-425 113-358 (403)
32 3otg_A CALG1; calicheamicin, T 99.8 6E-18 2.1E-22 170.2 16.4 314 4-425 20-373 (412)
33 3s2u_A UDP-N-acetylglucosamine 99.8 5.2E-17 1.8E-21 162.5 22.8 287 23-425 21-321 (365)
34 2iyf_A OLED, oleandomycin glyc 99.7 2.2E-15 7.4E-20 152.8 25.2 125 256-425 231-364 (430)
35 4fzr_A SSFS6; structural genom 99.6 6.3E-16 2.2E-20 155.3 13.2 123 255-425 225-365 (398)
36 3ia7_A CALG4; glycosysltransfe 99.6 1.5E-14 5E-19 144.6 21.4 123 255-425 229-363 (402)
37 3tsa_A SPNG, NDP-rhamnosyltran 99.6 1.2E-15 4.1E-20 152.6 10.8 127 255-426 216-354 (391)
38 3oti_A CALG3; calicheamicin, T 99.6 9.5E-15 3.3E-19 146.8 12.8 119 255-419 230-360 (398)
39 3rsc_A CALG2; TDP, enediyne, s 99.6 2.9E-13 9.8E-18 136.3 22.1 92 317-425 277-378 (415)
40 2p6p_A Glycosyl transferase; X 99.5 6.4E-13 2.2E-17 132.5 16.7 121 256-425 209-344 (384)
41 4hwg_A UDP-N-acetylglucosamine 99.4 1E-12 3.6E-17 132.3 15.5 233 100-425 93-339 (385)
42 2iya_A OLEI, oleandomycin glyc 99.3 2.7E-10 9.1E-15 115.2 21.5 93 316-425 284-386 (424)
43 2yjn_A ERYCIII, glycosyltransf 99.2 8.4E-11 2.9E-15 119.8 13.5 122 255-425 265-400 (441)
44 3h4t_A Glycosyltransferase GTF 99.1 4.7E-09 1.6E-13 105.7 20.9 122 255-426 219-350 (404)
45 3q3e_A HMW1C-like glycosyltran 99.0 4.4E-08 1.5E-12 103.1 24.6 106 258-397 441-550 (631)
46 1iir_A Glycosyltransferase GTF 99.0 1.4E-08 5E-13 102.3 18.7 118 257-425 238-366 (415)
47 4amg_A Snogd; transferase, pol 98.9 3.3E-09 1.1E-13 105.7 9.4 125 254-424 234-364 (400)
48 1rrv_A Glycosyltransferase GTF 98.9 1.1E-07 3.7E-12 95.8 19.0 118 257-425 237-367 (416)
49 2o6l_A UDP-glucuronosyltransfe 98.8 9.7E-09 3.3E-13 90.5 7.9 120 256-425 20-151 (170)
50 1l5w_A Maltodextrin phosphoryl 98.6 2.2E-06 7.6E-11 92.1 19.8 138 258-419 526-684 (796)
51 3tov_A Glycosyl transferase fa 98.1 0.00024 8.1E-09 70.1 20.6 105 253-395 181-287 (349)
52 1psw_A ADP-heptose LPS heptosy 98.1 0.0001 3.5E-09 71.8 16.5 103 255-395 178-287 (348)
53 3hbm_A UDP-sugar hydrolase; PS 98.0 0.00082 2.8E-08 64.3 21.4 66 318-396 186-252 (282)
54 2c4m_A Glycogen phosphorylase; 97.8 0.00011 3.7E-09 79.1 11.9 224 161-414 397-668 (796)
55 2gj4_A Glycogen phosphorylase, 97.7 0.00018 6.3E-09 77.6 12.6 137 258-418 550-707 (824)
56 2acv_A Triterpene UDP-glucosyl 97.7 0.052 1.8E-06 55.2 29.7 74 342-426 333-423 (463)
57 3hbf_A Flavonoid 3-O-glucosylt 97.5 0.08 2.8E-06 53.8 28.2 77 341-426 327-412 (454)
58 2c1x_A UDP-glucose flavonoid 3 97.5 0.015 5E-07 59.3 22.3 74 341-425 325-409 (456)
59 2pq6_A UDP-glucuronosyl/UDP-gl 97.4 0.04 1.4E-06 56.3 24.2 77 341-426 353-437 (482)
60 2vch_A Hydroquinone glucosyltr 97.3 0.11 3.9E-06 53.0 26.4 73 346-426 343-427 (480)
61 4gyw_A UDP-N-acetylglucosamine 97.1 0.0021 7.3E-08 69.4 11.2 113 248-395 514-629 (723)
62 3l7i_A Teichoic acid biosynthe 96.8 0.057 1.9E-06 58.2 19.6 220 123-424 432-679 (729)
63 2jzc_A UDP-N-acetylglucosamine 95.8 0.0049 1.7E-07 56.8 3.2 73 342-425 115-196 (224)
64 1ygp_A Yeast glycogen phosphor 94.1 0.3 1E-05 52.8 11.8 148 258-419 600-767 (879)
65 2gt1_A Lipopolysaccharide hept 92.4 0.17 5.8E-06 48.4 6.1 100 256-395 177-279 (326)
66 2k6g_A Replication factor C su 80.5 5.7 0.0002 31.8 7.4 83 292-393 13-97 (109)
67 2ebu_A Replication factor C su 79.6 6.6 0.00022 31.7 7.5 75 304-395 13-89 (112)
68 1fy2_A Aspartyl dipeptidase; s 59.3 11 0.00036 34.2 5.0 64 330-397 52-122 (229)
69 3kcq_A Phosphoribosylglycinami 54.3 19 0.00065 32.4 5.7 85 1-110 5-91 (215)
70 1rcu_A Conserved hypothetical 49.8 16 0.00054 32.4 4.4 70 353-425 110-192 (195)
71 3mm4_A Histidine kinase homolo 49.4 1E+02 0.0035 26.4 9.8 107 315-426 60-194 (206)
72 3av3_A Phosphoribosylglycinami 48.0 36 0.0012 30.3 6.6 57 3-62 2-60 (212)
73 4dzz_A Plasmid partitioning pr 46.3 44 0.0015 28.5 6.8 72 20-117 18-91 (206)
74 3ehd_A Uncharacterized conserv 45.0 34 0.0012 29.3 5.6 67 357-425 65-160 (162)
75 2vxb_A DNA repair protein RHP9 44.8 24 0.00082 32.2 4.9 77 314-395 3-97 (241)
76 3auf_A Glycinamide ribonucleot 44.7 56 0.0019 29.5 7.4 57 3-62 21-79 (229)
77 2ywr_A Phosphoribosylglycinami 44.1 41 0.0014 30.0 6.3 54 5-62 2-58 (216)
78 3vot_A L-amino acid ligase, BL 43.1 1.6E+02 0.0056 28.4 11.2 39 1-45 1-40 (425)
79 3zqu_A Probable aromatic acid 42.7 27 0.00093 31.2 4.8 40 1-42 1-40 (209)
80 1l7b_A DNA ligase; BRCT, autos 42.6 46 0.0016 25.5 5.5 65 313-395 7-72 (92)
81 3kb6_A D-lactate dehydrogenase 40.9 87 0.003 29.9 8.5 84 316-400 141-235 (334)
82 2ixd_A LMBE-related protein; h 40.6 1.2E+02 0.004 27.4 9.0 18 24-42 23-40 (242)
83 4f3y_A DHPR, dihydrodipicolina 40.6 25 0.00087 32.7 4.4 77 316-398 7-107 (272)
84 3ty2_A 5'-nucleotidase SURE; s 40.3 32 0.0011 31.9 5.0 41 3-45 8-49 (261)
85 1vl6_A Malate oxidoreductase; 40.0 70 0.0024 31.4 7.7 76 313-392 189-290 (388)
86 4ds3_A Phosphoribosylglycinami 37.4 75 0.0026 28.2 6.9 56 4-62 7-64 (209)
87 1i1q_B Anthranilate synthase c 36.5 1.3E+02 0.0043 25.8 8.2 70 324-395 9-83 (192)
88 3nrb_A Formyltetrahydrofolate 35.1 2.1E+02 0.0073 26.5 10.0 57 3-62 87-144 (287)
89 2qsj_A DNA-binding response re 35.0 1.1E+02 0.0037 24.3 7.2 105 316-425 3-121 (154)
90 3iqw_A Tail-anchored protein t 34.7 1.1E+02 0.0037 29.1 8.0 28 15-43 27-54 (334)
91 2x5n_A SPRPN10, 26S proteasome 34.6 67 0.0023 27.9 6.0 58 4-62 106-171 (192)
92 3obi_A Formyltetrahydrofolate 33.9 2E+02 0.0069 26.7 9.6 56 3-62 88-145 (288)
93 3llv_A Exopolyphosphatase-rela 33.2 1.8E+02 0.0061 22.9 10.8 115 22-183 19-133 (141)
94 3grc_A Sensor protein, kinase; 33.0 1.7E+02 0.0057 22.5 9.0 104 316-425 6-124 (140)
95 1xv5_A AGT, DNA alpha-glucosyl 32.9 2.7E+02 0.0092 24.9 10.9 74 352-425 278-364 (401)
96 4fyk_A Deoxyribonucleoside 5'- 32.0 1.3E+02 0.0045 25.3 7.2 37 357-394 64-100 (152)
97 3vnd_A TSA, tryptophan synthas 31.6 2.8E+02 0.0097 25.4 10.1 96 317-414 124-236 (267)
98 3heb_A Response regulator rece 31.3 1.9E+02 0.0065 22.7 9.3 105 317-426 5-133 (152)
99 3ijp_A DHPR, dihydrodipicolina 30.9 37 0.0013 31.9 3.8 77 316-398 21-122 (288)
100 3sqd_A PAX-interacting protein 30.7 28 0.00094 31.2 2.8 62 316-395 16-78 (219)
101 3en0_A Cyanophycinase; serine 30.3 1.3E+02 0.0044 28.2 7.5 69 329-397 74-154 (291)
102 1xdw_A NAD+-dependent (R)-2-hy 30.3 1.5E+02 0.0052 28.0 8.3 83 316-399 146-238 (331)
103 3lou_A Formyltetrahydrofolate 29.6 2.1E+02 0.0073 26.6 9.0 56 3-62 94-150 (292)
104 3n0v_A Formyltetrahydrofolate 29.4 1.8E+02 0.0063 27.0 8.5 56 3-62 89-145 (286)
105 1meo_A Phosophoribosylglycinam 29.3 1.3E+02 0.0045 26.5 7.1 54 6-62 2-57 (209)
106 4dgs_A Dehydrogenase; structur 29.3 1.5E+02 0.005 28.4 7.9 85 314-399 169-262 (340)
107 2yq5_A D-isomer specific 2-hyd 29.3 2E+02 0.007 27.4 9.0 83 316-399 148-240 (343)
108 2cok_A Poly [ADP-ribose] polym 28.9 41 0.0014 26.9 3.2 67 314-395 11-78 (113)
109 1uan_A Hypothetical protein TT 28.8 2.1E+02 0.007 25.4 8.5 18 24-42 21-38 (227)
110 3tqr_A Phosphoribosylglycinami 28.0 1.3E+02 0.0046 26.7 6.9 59 1-62 1-61 (215)
111 3pp8_A Glyoxylate/hydroxypyruv 27.9 92 0.0032 29.4 6.2 84 315-399 138-233 (315)
112 4dad_A Putative pilus assembly 27.8 68 0.0023 25.3 4.6 107 314-425 18-138 (146)
113 3p9x_A Phosphoribosylglycinami 27.7 1.4E+02 0.0047 26.6 6.9 56 4-62 2-59 (211)
114 3jtm_A Formate dehydrogenase, 27.6 2E+02 0.0068 27.6 8.6 85 314-399 162-260 (351)
115 3da8_A Probable 5'-phosphoribo 27.5 80 0.0027 28.2 5.3 56 4-62 12-67 (215)
116 3o1l_A Formyltetrahydrofolate 27.3 3.3E+02 0.011 25.5 9.9 56 3-62 104-160 (302)
117 1qp8_A Formate dehydrogenase; 27.2 1.9E+02 0.0066 26.9 8.3 85 314-399 122-214 (303)
118 3slg_A PBGP3 protein; structur 27.2 85 0.0029 29.5 5.9 53 7-62 25-77 (372)
119 3l4e_A Uncharacterized peptida 26.9 34 0.0012 30.3 2.7 68 329-397 47-122 (206)
120 3dfz_A SIRC, precorrin-2 dehyd 26.9 1.1E+02 0.0037 27.4 6.2 40 19-59 41-80 (223)
121 3cg4_A Response regulator rece 26.8 2.1E+02 0.0073 21.9 9.9 104 316-425 7-124 (142)
122 3lkv_A Uncharacterized conserv 26.4 3.7E+02 0.013 24.4 18.5 83 329-417 159-245 (302)
123 1zh8_A Oxidoreductase; TM0312, 26.3 1.9E+02 0.0066 27.0 8.3 69 315-395 43-113 (340)
124 4g2n_A D-isomer specific 2-hyd 26.1 1.5E+02 0.0052 28.3 7.4 84 314-399 171-267 (345)
125 3cnb_A DNA-binding response re 26.1 2.2E+02 0.0075 21.7 9.1 105 316-425 8-127 (143)
126 2f62_A Nucleoside 2-deoxyribos 26.0 1.5E+02 0.005 25.1 6.5 40 356-395 62-105 (161)
127 2zay_A Response regulator rece 25.9 2.3E+02 0.0079 21.9 9.3 105 315-425 7-125 (147)
128 2cuk_A Glycerate dehydrogenase 25.9 2.3E+02 0.0079 26.4 8.6 85 314-399 142-233 (311)
129 3oet_A Erythronate-4-phosphate 25.5 2.1E+02 0.0071 27.9 8.3 84 316-400 119-215 (381)
130 1id1_A Putative potassium chan 25.3 2.6E+02 0.009 22.4 11.3 118 22-184 16-136 (153)
131 3kht_A Response regulator; PSI 25.3 2.3E+02 0.008 21.8 9.2 105 316-425 5-125 (144)
132 2j6i_A Formate dehydrogenase; 25.2 1.8E+02 0.006 28.0 7.7 85 314-399 162-261 (364)
133 1g63_A Epidermin modifying enz 25.0 58 0.002 28.3 3.8 38 4-43 2-39 (181)
134 1kzy_C Tumor suppressor P53-bi 24.8 89 0.003 28.5 5.3 19 377-395 98-116 (259)
135 1q74_A 1D-MYO-inosityl 2-aceta 24.4 2.3E+02 0.008 26.3 8.3 18 24-42 24-41 (303)
136 2pi1_A D-lactate dehydrogenase 24.3 2.4E+02 0.0081 26.7 8.4 83 316-399 141-234 (334)
137 1jkx_A GART;, phosphoribosylgl 24.3 1.7E+02 0.0057 25.9 6.8 54 6-62 2-57 (212)
138 4e7p_A Response regulator; DNA 24.1 2.6E+02 0.0088 21.8 8.3 106 316-426 20-138 (150)
139 3gvx_A Glycerate dehydrogenase 23.8 2E+02 0.0067 26.8 7.5 85 314-399 120-213 (290)
140 1jbe_A Chemotaxis protein CHEY 23.6 2.3E+02 0.008 21.2 9.1 104 317-425 5-122 (128)
141 2zki_A 199AA long hypothetical 23.6 51 0.0018 28.2 3.2 41 1-43 1-42 (199)
142 1j4a_A D-LDH, D-lactate dehydr 23.4 1.9E+02 0.0066 27.3 7.6 82 316-399 146-239 (333)
143 3dhn_A NAD-dependent epimerase 23.2 3.4E+02 0.012 22.9 11.5 53 1-62 1-54 (227)
144 3q9l_A Septum site-determining 23.2 3.7E+02 0.013 23.3 10.7 23 20-43 19-41 (260)
145 2iz6_A Molybdenum cofactor car 23.0 28 0.00094 30.2 1.3 67 356-425 102-171 (176)
146 3hzh_A Chemotaxis response reg 22.9 2.8E+02 0.0097 21.9 8.7 106 316-426 36-155 (157)
147 4had_A Probable oxidoreductase 22.6 3.2E+02 0.011 25.3 9.0 70 314-395 46-117 (350)
148 2lpm_A Two-component response 22.4 1.4E+02 0.0047 23.8 5.4 106 316-426 8-120 (123)
149 2wqk_A 5'-nucleotidase SURE; S 22.3 88 0.003 28.6 4.7 116 4-134 1-126 (251)
150 3gt7_A Sensor protein; structu 22.3 2.7E+02 0.0093 21.9 7.5 104 316-425 7-124 (154)
151 1e2b_A Enzyme IIB-cellobiose; 22.2 2.6E+02 0.0091 21.5 6.9 65 319-391 7-76 (106)
152 3ba1_A HPPR, hydroxyphenylpyru 21.9 2.4E+02 0.0081 26.7 7.9 83 316-399 164-255 (333)
153 2d8m_A DNA-repair protein XRCC 21.7 3E+02 0.01 21.8 8.0 64 314-395 23-87 (129)
154 1dxy_A D-2-hydroxyisocaproate 21.4 2.2E+02 0.0075 26.9 7.5 83 315-399 144-237 (333)
155 4hy3_A Phosphoglycerate oxidor 21.4 2.1E+02 0.007 27.6 7.3 84 315-399 175-270 (365)
156 3p2y_A Alanine dehydrogenase/p 21.3 5.2E+02 0.018 25.0 10.2 86 315-401 183-310 (381)
157 2ekl_A D-3-phosphoglycerate de 21.3 3.3E+02 0.011 25.3 8.7 85 314-399 140-236 (313)
158 3h1g_A Chemotaxis protein CHEY 21.2 2.7E+02 0.0092 21.0 9.1 104 317-425 6-124 (129)
159 3dty_A Oxidoreductase, GFO/IDH 21.2 2.1E+02 0.0071 27.5 7.5 71 315-394 38-115 (398)
160 1p9l_A Dihydrodipicolinate red 21.1 2.1E+02 0.007 25.9 6.9 76 318-398 2-79 (245)
161 1h6d_A Precursor form of gluco 21.0 1.9E+02 0.0066 28.2 7.3 72 314-395 106-181 (433)
162 3q0i_A Methionyl-tRNA formyltr 20.8 1.5E+02 0.005 28.1 6.0 36 1-42 4-39 (318)
163 3al2_A DNA topoisomerase 2-bin 20.8 40 0.0014 30.5 1.9 65 316-395 9-74 (235)
164 3hn2_A 2-dehydropantoate 2-red 20.7 1.3E+02 0.0044 27.9 5.6 46 5-60 3-48 (312)
165 1k68_A Phytochrome response re 20.7 2.7E+02 0.0094 20.9 9.7 104 317-425 3-128 (140)
166 3fwz_A Inner membrane protein 20.5 3.2E+02 0.011 21.6 11.1 114 23-183 21-135 (140)
167 4hcj_A THIJ/PFPI domain protei 20.4 75 0.0026 27.2 3.6 43 1-44 4-46 (177)
168 1wwk_A Phosphoglycerate dehydr 20.2 4.1E+02 0.014 24.5 9.1 85 314-399 140-236 (307)
169 3f6c_A Positive transcription 20.1 2.8E+02 0.0097 20.8 8.0 105 317-426 2-118 (134)
170 1zud_1 Adenylyltransferase THI 20.0 99 0.0034 28.0 4.5 42 351-396 108-151 (251)
No 1
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=100.00 E-value=3.5e-37 Score=307.81 Aligned_cols=326 Identities=14% Similarity=0.116 Sum_probs=246.3
Q ss_pred CCCcceEEEEEeCCCCCChhHHHHHHHHHhh-CCCcEEEEecCCCCCc-ccccCCCceEEEEeecCCCCCCCCcchhhHH
Q 014316 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGSKPH-AAILEHPSIHIHTMTQWPTIPRGLPKVLKPV 78 (427)
Q Consensus 1 ~~~~~~~~v~~~~~~~~~~r~~~~a~~La~~-~g~~V~vi~~~~~~~~-~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~ 78 (427)
|++|++++++........+|....+..|++. .||+|+|++....... .......++++++++ ... ........
T Consensus 1 M~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~ 75 (394)
T 3okp_A 1 MSASRKTLVVTNDFPPRIGGIQSYLRDFIATQDPESIVVFASTQNAEEAHAYDKTLDYEVIRWP--RSV---MLPTPTTA 75 (394)
T ss_dssp ---CCCEEEEESCCTTSCSHHHHHHHHHHTTSCGGGEEEEEECSSHHHHHHHHTTCSSEEEEES--SSS---CCSCHHHH
T ss_pred CCCCceEEEEeCccCCccchHHHHHHHHHHHhcCCeEEEEECCCCccchhhhccccceEEEEcc--ccc---cccchhhH
Confidence 7788888887765444456777777777776 6999999998765321 333346689999998 321 11233334
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCc-EEEEecccchhhhhhhcCCCchHHHHHH
Q 014316 79 LLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSA-FIVDWHNFGYTLLSLSLGRRSHFVSIYR 157 (427)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p-~i~~~h~~~~~~~~~~~~~~~~~~~~~~ 157 (427)
..+.+.+.+ .+||+||+|++.... +++.+ ++..++| +|+++|+..... .. ....+
T Consensus 76 ~~l~~~~~~------------~~~Dvv~~~~~~~~~--~~~~~-~~~~~~~~~i~~~h~~~~~~------~~---~~~~~ 131 (394)
T 3okp_A 76 HAMAEIIRE------------REIDNVWFGAAAPLA--LMAGT-AKQAGASKVIASTHGHEVGW------SM---LPGSR 131 (394)
T ss_dssp HHHHHHHHH------------TTCSEEEESSCTTGG--GGHHH-HHHTTCSEEEEECCSTHHHH------TT---SHHHH
T ss_pred HHHHHHHHh------------cCCCEEEECCcchHH--HHHHH-HHhcCCCcEEEEeccchhhh------hh---cchhh
Confidence 444444443 799999999844332 22333 4455776 888999873310 11 12345
Q ss_pred HHHHHHhccCCEEEEcCHHHHHHHHHhhCC--eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCC
Q 014316 158 WIEKYYGKMANGCLCVTQAMQHELAQNWGI--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGME 234 (427)
Q Consensus 158 ~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~--~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (427)
++++.+.+.+|.++++|+.+++.+.+.++. ++.+|||+ +.+.|.+.....+.++..++
T Consensus 132 ~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~------------------- 192 (394)
T 3okp_A 132 QSLRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPEDKSATRKKL------------------- 192 (394)
T ss_dssp HHHHHHHHHCSEEEESCHHHHHHHHHHHCSSSEEEECCCCBCTTTSCCCCHHHHHHHHHHT-------------------
T ss_pred HHHHHHHHhCCEEEEcCHHHHHHHHHhcCCCCCeEEecCCcCHHHcCCCCchhhHHHHHhc-------------------
Confidence 666777899999999999999999988765 48999999 87788775544444433332
Q ss_pred CCCccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCC
Q 014316 235 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLY 314 (427)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (427)
+++.+. ..|+|+|++.+.||++.+++|++.+.+. .
T Consensus 193 -----------------~~~~~~-~~i~~~G~~~~~Kg~~~li~a~~~l~~~---------------------------~ 227 (394)
T 3okp_A 193 -----------------GFTDTT-PVIACNSRLVPRKGQDSLIKAMPQVIAA---------------------------R 227 (394)
T ss_dssp -----------------TCCTTC-CEEEEESCSCGGGCHHHHHHHHHHHHHH---------------------------S
T ss_pred -----------------CCCcCc-eEEEEEeccccccCHHHHHHHHHHHHhh---------------------------C
Confidence 333333 4899999999999999999999999887 7
Q ss_pred CCEEEEEEeCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCC-------CCCchHHHHHHc
Q 014316 315 PRLLFIITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG-------LDLPMKVVDMFG 386 (427)
Q Consensus 315 ~~~~l~i~G~G~~~~~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~-------e~~p~~~lEama 386 (427)
|+++|+|+|+|++.+.+++++ .++ ++|.|+|. ++.+++.++|+.||++|+| |.. |++|++++||||
T Consensus 228 ~~~~l~i~G~g~~~~~l~~~~--~~~~~~v~~~g~-~~~~~~~~~~~~ad~~v~p---s~~~~~~~~~e~~~~~~~Ea~a 301 (394)
T 3okp_A 228 PDAQLLIVGSGRYESTLRRLA--TDVSQNVKFLGR-LEYQDMINTLAAADIFAMP---ARTRGGGLDVEGLGIVYLEAQA 301 (394)
T ss_dssp TTCEEEEECCCTTHHHHHHHT--GGGGGGEEEEES-CCHHHHHHHHHHCSEEEEC---CCCBGGGTBCCSSCHHHHHHHH
T ss_pred CCeEEEEEcCchHHHHHHHHH--hcccCeEEEcCC-CCHHHHHHHHHhCCEEEec---CccccccccccccCcHHHHHHH
Confidence 899999999999999998888 455 58999998 9999999999999999998 665 999999999999
Q ss_pred CCCcEEEeccCccccceecCCcEEEeC--ChHHHHHHHHHhc
Q 014316 387 CGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLVNA 426 (427)
Q Consensus 387 ~G~PVIas~~~g~~e~v~~~~~G~l~~--~~~~la~~l~~~~ 426 (427)
+|+|||+|+.|+..|++.++ +|++++ |+++++++|.++.
T Consensus 302 ~G~PvI~~~~~~~~e~i~~~-~g~~~~~~d~~~l~~~i~~l~ 342 (394)
T 3okp_A 302 CGVPVIAGTSGGAPETVTPA-TGLVVEGSDVDKLSELLIELL 342 (394)
T ss_dssp TTCCEEECSSTTGGGGCCTT-TEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEeCCCChHHHHhcC-CceEeCCCCHHHHHHHHHHHH
Confidence 99999999999999999999 999994 8999999998764
No 2
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=100.00 E-value=1.2e-36 Score=309.61 Aligned_cols=342 Identities=16% Similarity=0.159 Sum_probs=238.8
Q ss_pred CcceEEEEEeC----------CCCCChh-HHHHHHHHHhhCCCcEEEEecCCCCCccc-ccCCCceEEEEeecCCCCCCC
Q 014316 3 RRGRACVVVLG----------DLGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAA-ILEHPSIHIHTMTQWPTIPRG 70 (427)
Q Consensus 3 ~~~~~~v~~~~----------~~~~~~r-~~~~a~~La~~~g~~V~vi~~~~~~~~~~-~~~~~~i~v~~~~~~~~~~~~ 70 (427)
+|++|+++... ..|+.++ +...+..|+++ ||+|+|+|......... ....+++++++++. .+...
T Consensus 19 ~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~--~~~~~ 95 (438)
T 3c48_A 19 SHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQ-GIEVDIYTRATRPSQGEIVRVAENLRVINIAA--GPYEG 95 (438)
T ss_dssp CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHT-TCEEEEEEECCCGGGCSEEEEETTEEEEEECC--SCSSS
T ss_pred chheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhc-CCEEEEEecCCCCCCcccccccCCeEEEEecC--CCccc
Confidence 46677776642 2344333 35566777775 99999999765421111 11235899999983 21111
Q ss_pred Cc--chhhHHHHHHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCC
Q 014316 71 LP--KVLKPVLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGR 148 (427)
Q Consensus 71 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~ 148 (427)
+. .....+..+.+.+.+ ..+.+..+||+||+|. .....++.++++..++|+|+++|+... ........
T Consensus 96 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~Div~~~~---~~~~~~~~~~~~~~~~p~v~~~h~~~~-~~~~~~~~ 165 (438)
T 3c48_A 96 LSKEELPTQLAAFTGGMLS------FTRREKVTYDLIHSHY---WLSGQVGWLLRDLWRIPLIHTAHTLAA-VKNSYRDD 165 (438)
T ss_dssp CCGGGGGGGHHHHHHHHHH------HHHHHTCCCSEEEEEH---HHHHHHHHHHHHHHTCCEEEECSSCHH-HHSCC---
T ss_pred cchhHHHHHHHHHHHHHHH------HHHhccCCCCEEEeCC---ccHHHHHHHHHHHcCCCEEEEecCCcc-cccccccc
Confidence 11 111111111111111 1122223599999997 444444666777789999999999832 21111111
Q ss_pred -CchHHHHHHHHHHHHhccCCEEEEcCHHHHHHHHHhhCCe---EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCC
Q 014316 149 -RSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPL 223 (427)
Q Consensus 149 -~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 223 (427)
.........++++.+.+.+|.++++|+.+++.+.+.++.+ +.+|+|+ +.+.|.+.....+.++..+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~ngvd~~~~~~~~~~~~~~~r~~--------- 236 (438)
T 3c48_A 166 SDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGNDRATERSRRE--------- 236 (438)
T ss_dssp -CCHHHHHHHHHHHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCCCCCTTTSCCC----CHHHHHH---------
T ss_pred cCCcchHHHHHHHHHHHhcCCEEEEcCHHHHHHHHHHhCCChhheEEecCCccccccCCcccchhhhhHHh---------
Confidence 1111234456788888999999999999999998877754 8999999 7777765432221112111
Q ss_pred CccccccCCCCCCCccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhh
Q 014316 224 GVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFL 303 (427)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~ 303 (427)
++++.+ ..+|+|+|++.+.||++.+++|++.+.++
T Consensus 237 ---------------------------~~~~~~-~~~i~~~G~~~~~Kg~~~li~a~~~l~~~----------------- 271 (438)
T 3c48_A 237 ---------------------------LGIPLH-TKVVAFVGRLQPFKGPQVLIKAVAALFDR----------------- 271 (438)
T ss_dssp ---------------------------TTCCSS-SEEEEEESCBSGGGCHHHHHHHHHHHHHH-----------------
T ss_pred ---------------------------cCCCCC-CcEEEEEeeecccCCHHHHHHHHHHHHhh-----------------
Confidence 233333 35899999999999999999999999876
Q ss_pred hhhcCCcccCCC--CEEEEEEeC----CCChHHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCC
Q 014316 304 KEISDGKQYLYP--RLLFIITGK----GPDKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLD 376 (427)
Q Consensus 304 ~~~~~~~~~~~~--~~~l~i~G~----G~~~~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~ 376 (427)
.| +++|+|+|+ |+..+.+++++++++++ +|.|+|. ++.+++.++|+.||++|+| |..|+
T Consensus 272 ----------~p~~~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~-~~~~~~~~~~~~adv~v~p---s~~e~ 337 (438)
T 3c48_A 272 ----------DPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDP-RPPSELVAVYRAADIVAVP---SFNES 337 (438)
T ss_dssp ----------CTTCSEEEEEECCBC------CHHHHHHHHTTCTTTEEEECC-CCHHHHHHHHHHCSEEEEC---CSCCS
T ss_pred ----------CCCcceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCC-CChHHHHHHHHhCCEEEEC---ccccC
Confidence 66 799999999 88889999999999985 8999997 9999999999999999997 77799
Q ss_pred CchHHHHHHcCCCcEEEeccCccccceecCCcEEEeC--ChHHHHHHHHHh
Q 014316 377 LPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS--SSSELADQLLVN 425 (427)
Q Consensus 377 ~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~~--~~~~la~~l~~~ 425 (427)
+|++++||||||+|||+|+.|+..|++.++.+|++++ |+++++++|.++
T Consensus 338 ~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l 388 (438)
T 3c48_A 338 FGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATL 388 (438)
T ss_dssp SCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHH
T ss_pred CchHHHHHHHcCCCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999994 789999999876
No 3
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=100.00 E-value=2.1e-36 Score=306.11 Aligned_cols=348 Identities=16% Similarity=0.100 Sum_probs=241.6
Q ss_pred cceEEEEEeC----CCCCChh-HHHHHHHHHhhCCCcEEEEecCCCCCcccc-----------------cCCCceEEEEe
Q 014316 4 RGRACVVVLG----DLGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAI-----------------LEHPSIHIHTM 61 (427)
Q Consensus 4 ~~~~~v~~~~----~~~~~~r-~~~~a~~La~~~g~~V~vi~~~~~~~~~~~-----------------~~~~~i~v~~~ 61 (427)
+++++++... ..||.++ +...+..|+++ ||+|+|+|+......... ...+|++++++
T Consensus 2 ~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 2 HMKVLLLGFEFLPVKVGGLAEALTAISEALASL-GHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHT-TCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred ceEEEEEecccCCcccCCHHHHHHHHHHHHHHC-CCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 3455555533 3444444 45567788886 999999997654422110 04469999999
Q ss_pred ecCCCCCCCCcc-hhhH-HHHHHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccch
Q 014316 62 TQWPTIPRGLPK-VLKP-VLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGY 139 (427)
Q Consensus 62 ~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~ 139 (427)
+........+.. .... ...+..+......++..++.+..+||+||+|+ ....+++.++++..++|+|+++|+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~---~~~~~~~~~~~~~~~~~~v~~~h~~~~ 157 (439)
T 3fro_A 81 GGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHD---WHTVFAGALIKKYFKIPAVFTIHRLNK 157 (439)
T ss_dssp ESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEES---GGGHHHHHHHHHHHCCCEEEEESCCCC
T ss_pred cchhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecc---hhhhhhHHHHhhccCCCEEEEeccccc
Confidence 831000001111 1111 22222233333333333333357999999998 444555667778889999999999843
Q ss_pred hhhhh---hcCCCchH-HHHHHHHHHHHhccCCEEEEcCHHHHHHHHHhh---CCeEEEecCC-CCCCcCCCC-----hH
Q 014316 140 TLLSL---SLGRRSHF-VSIYRWIEKYYGKMANGCLCVTQAMQHELAQNW---GIKATVLYDQ-PPEFFHPTS-----LE 206 (427)
Q Consensus 140 ~~~~~---~~~~~~~~-~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~---~~~~~vi~n~-~~~~f~~~~-----~~ 206 (427)
..... ........ .....++++.+.+.||.++++|+.+++.....+ ..++.+|||| +.+.|.+.. .+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~ 237 (439)
T 3fro_A 158 SKLPAFYFHEAGLSELAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESYLTGSRDE 237 (439)
T ss_dssp CCEEHHHHHHTTCGGGCCSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCCCCCTTTSCGGGSCSCHHH
T ss_pred ccCchHHhCccccccccccceeeHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCCCCCchhcCcccccchhhh
Confidence 11000 00000000 000115677888899999999999998855533 3459999999 777776541 12
Q ss_pred HHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCeEEEEEeecC-CCCCHHHHHHHHHhhHH
Q 014316 207 EKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDR 285 (427)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~-~~K~~~~Li~a~~~l~~ 285 (427)
.+.++..+ ++++++ ..|+|+|++. +.||++.+++|++.+.+
T Consensus 238 ~~~~~~~~------------------------------------~~~~~~--~~i~~~G~~~~~~Kg~~~li~a~~~l~~ 279 (439)
T 3fro_A 238 RKKSLLSK------------------------------------FGMDEG--VTFMFIGRFDRGQKGVDVLLKAIEILSS 279 (439)
T ss_dssp HHHHHHHH------------------------------------HTCCSC--EEEEEECCSSCTTBCHHHHHHHHHHHHT
T ss_pred hHHHHHHH------------------------------------cCCCCC--cEEEEEcccccccccHHHHHHHHHHHHh
Confidence 23333222 233333 6999999999 99999999999999876
Q ss_pred HHhhhhccCCCchhhhhhhhhcCCcccCC--CCEEEEEEeCCCCh--HHHHHHHHHcCCCcEEEecCCCCcccHHHHHhc
Q 014316 286 RVAAILNEDDSTNEEVFLKEISDGKQYLY--PRLLFIITGKGPDK--ESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS 361 (427)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~i~G~G~~~--~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~ 361 (427)
+ . ++++|+|+|+|+.. +.+++++++++ +.+.|.|. ++.+++.++|++
T Consensus 280 ~---------------------------~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~-~~~~~~g~-~~~~~~~~~~~~ 330 (439)
T 3fro_A 280 K---------------------------KEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEM-LSREFVRELYGS 330 (439)
T ss_dssp S---------------------------GGGGGEEEEEECCCCHHHHHHHHHHHHHCT-TEEEECSC-CCHHHHHHHHTT
T ss_pred c---------------------------ccCCCeEEEEEcCCChhHHHHHHHHHhhcC-CEEEEcCC-CCHHHHHHHHHH
Confidence 3 3 78999999999977 88999999998 67888886 899999999999
Q ss_pred CcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe--CChHHHHHHHHHhc
Q 014316 362 ADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 362 adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~~ 426 (427)
||++|+| |..|++|++++||||||+|||+|+.||..|++.++ +|+++ +|+++++++|.++.
T Consensus 331 adv~v~p---s~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~~~~d~~~la~~i~~ll 393 (439)
T 3fro_A 331 VDFVIIP---SYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILVKAGDPGELANAILKAL 393 (439)
T ss_dssp CSEEEEC---BSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTT-TCEEECTTCHHHHHHHHHHHH
T ss_pred CCEEEeC---CCCCCccHHHHHHHHCCCCeEEcCCCCcceeEEcC-ceEEeCCCCHHHHHHHHHHHH
Confidence 9999997 77799999999999999999999999999999877 99999 48899999998753
No 4
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=100.00 E-value=1.6e-35 Score=307.55 Aligned_cols=349 Identities=15% Similarity=0.097 Sum_probs=240.2
Q ss_pred CCCcceEEEEEeCC--------------CCCChh-HHHHHHHHHhhCCCcEEEEecCCCCCc-cc----cc---CCCceE
Q 014316 1 MGRRGRACVVVLGD--------------LGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPH-AA----IL---EHPSIH 57 (427)
Q Consensus 1 ~~~~~~~~v~~~~~--------------~~~~~r-~~~~a~~La~~~g~~V~vi~~~~~~~~-~~----~~---~~~~i~ 57 (427)
|+++++|+++.... .||.++ +...+..|+++ ||+|+|+|....... .. .. ...|++
T Consensus 4 m~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~gv~ 82 (499)
T 2r60_A 4 MTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEM-GVQVDIITRRIKDENWPEFSGEIDYYQETNKVR 82 (499)
T ss_dssp ---CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHT-TCEEEEEEECCCBTTBGGGCCSEEECTTCSSEE
T ss_pred ccccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhc-CCeEEEEeCCCCcccccchhhhHHhccCCCCeE
Confidence 55556777766531 233333 24456677775 999999997643211 11 11 146999
Q ss_pred EEEeecCCCCCCCCc--chhhHHHHHHHHHHHHHHHHHHHHhhh-CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEe
Q 014316 58 IHTMTQWPTIPRGLP--KVLKPVLLLLKPLIQFFMLLWFLCVKI-ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDW 134 (427)
Q Consensus 58 v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~ 134 (427)
+++++. .+...+. .....+.. .... +..++.+. .+||+||+|+ ....+++.++++..++|+|+++
T Consensus 83 v~~~~~--~~~~~~~~~~~~~~~~~---~~~~----l~~~l~~~~~~~Divh~~~---~~~~~~~~~~~~~~~~p~v~~~ 150 (499)
T 2r60_A 83 IVRIPF--GGDKFLPKEELWPYLHE---YVNK----IINFYREEGKFPQVVTTHY---GDGGLAGVLLKNIKGLPFTFTG 150 (499)
T ss_dssp EEEECC--SCSSCCCGGGCGGGHHH---HHHH----HHHHHHHHTCCCSEEEEEH---HHHHHHHHHHHHHHCCCEEEEC
T ss_pred EEEecC--CCcCCcCHHHHHHHHHH---HHHH----HHHHHHhcCCCCCEEEEcC---CcchHHHHHHHHhcCCcEEEEc
Confidence 999983 2111111 11111111 1111 11112222 4899999998 4444556677777899999999
Q ss_pred cccchhhhhhhcCC---C-chHHH-----HHHHHHHHHhccCCEEEEcCHHHHHHHHHh--hC-C-------eEEEecCC
Q 014316 135 HNFGYTLLSLSLGR---R-SHFVS-----IYRWIEKYYGKMANGCLCVTQAMQHELAQN--WG-I-------KATVLYDQ 195 (427)
Q Consensus 135 h~~~~~~~~~~~~~---~-~~~~~-----~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~--~~-~-------~~~vi~n~ 195 (427)
|+..+... ..... . ..+.+ ...++++.+.+.+|.++++|+.+++.+.+. +| . ++.+||||
T Consensus 151 H~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ng 229 (499)
T 2r60_A 151 HSLGAQKM-EKLNVNTSNFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPG 229 (499)
T ss_dssp SSCHHHHH-HTTCCCSTTSHHHHHHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCCC
T ss_pred cCcccccc-hhhccCCCCcchhhhhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhhcccccccccCCCCeEEECCC
Confidence 99843211 11110 0 11111 234567888899999999999999998876 66 3 49999999
Q ss_pred -CCCCcCCCCh-HHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCeEEEEEeecCCCCCH
Q 014316 196 -PPEFFHPTSL-EEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDF 273 (427)
Q Consensus 196 -~~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~ 273 (427)
+.+.|.+... +.+.++..+++... ...+.+. .+|+|+||+.+.||+
T Consensus 230 vd~~~~~~~~~~~~~~~~r~~~~~~~-------------------------------~~~~~~~-~~i~~vGrl~~~Kg~ 277 (499)
T 2r60_A 230 VNTRVFDGEYGDKIKAKITKYLERDL-------------------------------GSERMEL-PAIIASSRLDQKKNH 277 (499)
T ss_dssp BCTTTSSSCCCHHHHHHHHHHHHHHS-------------------------------CGGGTTS-CEEEECSCCCGGGCH
T ss_pred cChhhcCccchhhhHHHHHHHhcccc-------------------------------cccCCCC-cEEEEeecCccccCH
Confidence 7777776542 22233332221000 0023333 489999999999999
Q ss_pred HHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCC-EEEEEEeC--CC------C-------hHHHHHHHHH
Q 014316 274 GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR-LLFIITGK--GP------D-------KESYEEKIRR 337 (427)
Q Consensus 274 ~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~i~G~--G~------~-------~~~~~~~~~~ 337 (427)
+.|++|++.+.++ .++ ++|+|+|+ |+ . .+++++++++
T Consensus 278 ~~li~a~~~l~~~---------------------------~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~ 330 (499)
T 2r60_A 278 YGLVEAYVQNKEL---------------------------QDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDN 330 (499)
T ss_dssp HHHHHHHHTCHHH---------------------------HHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh---------------------------CCCceEEEEECCCCCcccccccccccchHHHHHHHHHHHh
Confidence 9999999999765 233 68999998 44 1 6788999999
Q ss_pred cCCC-cEEEecCCCCcccHHHHHhcC----cEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe
Q 014316 338 LRLK-RVAFRTMWLSAEDYPLLLGSA----DLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF 412 (427)
Q Consensus 338 l~l~-~V~f~g~~~~~~~~~~~l~~a----di~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~ 412 (427)
++++ +|.|+|. ++.+++.++|++| |++|+| |..|+||++++||||||+|||+|+.||..|++.++.+|+++
T Consensus 331 ~~l~~~V~~~G~-v~~~~~~~~~~~a~~~~dv~v~p---S~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~g~l~ 406 (499)
T 2r60_A 331 NDCRGKVSMFPL-NSQQELAGCYAYLASKGSVFALT---SFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLV 406 (499)
T ss_dssp TTCBTTEEEEEC-CSHHHHHHHHHHHHHTTCEEEEC---CSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTGGGTSSEEE
T ss_pred cCCCceEEECCC-CCHHHHHHHHHhcCcCCCEEEEC---cccCCCCcHHHHHHHcCCCEEEecCCCHHHHhcCCceEEEe
Confidence 9995 7999998 9999999999999 999997 77899999999999999999999999999999999999999
Q ss_pred --CChHHHHHHHHHhc
Q 014316 413 --SSSSELADQLLVNA 426 (427)
Q Consensus 413 --~~~~~la~~l~~~~ 426 (427)
+|+++||++|.++.
T Consensus 407 ~~~d~~~la~~i~~ll 422 (499)
T 2r60_A 407 DPEDPEDIARGLLKAF 422 (499)
T ss_dssp CTTCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 58899999998764
No 5
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=100.00 E-value=7.5e-35 Score=292.80 Aligned_cols=313 Identities=15% Similarity=0.194 Sum_probs=223.6
Q ss_pred CCCCCChhH-HHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhh---HHHHHHHHHHHH
Q 014316 13 GDLGRSPRM-QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLK---PVLLLLKPLIQF 88 (427)
Q Consensus 13 ~~~~~~~r~-~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 88 (427)
...||.++. ...+..|+++ ||+|+|+|........ ...+++.++.++... ...+..... ....+.+.+
T Consensus 24 p~~GG~~~~~~~la~~L~~~-G~~V~v~~~~~~~~~~--~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~l--- 95 (394)
T 2jjm_A 24 PSVGGSGVVGTELGKQLAER-GHEIHFITSGLPFRLN--KVYPNIYFHEVTVNQ--YSVFQYPPYDLALASKMAEVA--- 95 (394)
T ss_dssp C--CHHHHHHHHHHHHHHHT-TCEEEEECSSCC------CCCTTEEEECCCCC------CCSCCHHHHHHHHHHHHH---
T ss_pred CCCCCHHHHHHHHHHHHHhC-CCEEEEEeCCCCCccc--ccCCceEEEeccccc--ccccccccccHHHHHHHHHHH---
Confidence 344544443 4456777775 9999999976432111 234588887776211 111111111 111122222
Q ss_pred HHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhc--CCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhcc
Q 014316 89 FMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLR--RSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKM 166 (427)
Q Consensus 89 ~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~--~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 166 (427)
+..+||+||+|++. +..+.+.++++.. ++|+|+++|+..+... +... .++.+++.+.+.
T Consensus 96 ---------~~~~~Dvv~~~~~~--~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~----~~~~----~~~~~~~~~~~~ 156 (394)
T 2jjm_A 96 ---------QRENLDILHVHYAI--PHAICAYLAKQMIGERIKIVTTLHGTDITVL----GSDP----SLNNLIRFGIEQ 156 (394)
T ss_dssp ---------HHHTCSEEEECSST--THHHHHHHHHHHTTTCSEEEEECCHHHHHTT----TTCT----TTHHHHHHHHHH
T ss_pred ---------HHcCCCEEEEcchh--HHHHHHHHHHHhhcCCCCEEEEEecCccccc----CCCH----HHHHHHHHHHhh
Confidence 23789999999733 3333344444443 5999999998633111 1111 224556777889
Q ss_pred CCEEEEcCHHHHHHHHHhhCC--eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhh
Q 014316 167 ANGCLCVTQAMQHELAQNWGI--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIF 243 (427)
Q Consensus 167 ad~vi~vS~~~~~~l~~~~~~--~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (427)
+|.++++|+.+++.+.+.++. ++.+|||+ +.+.|.+.... ++..+
T Consensus 157 ad~ii~~s~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~---~~~~~----------------------------- 204 (394)
T 2jjm_A 157 SDVVTAVSHSLINETHELVKPNKDIQTVYNFIDERVYFKRDMT---QLKKE----------------------------- 204 (394)
T ss_dssp SSEEEESCHHHHHHHHHHTCCSSCEEECCCCCCTTTCCCCCCH---HHHHH-----------------------------
T ss_pred CCEEEECCHHHHHHHHHhhCCcccEEEecCCccHHhcCCcchH---HHHHH-----------------------------
Confidence 999999999999999887765 59999999 77767654311 11111
Q ss_pred hcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEe
Q 014316 244 TSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG 323 (427)
Q Consensus 244 ~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G 323 (427)
++.+.+ ...|+|+|++.+.||++.+++|++.+.++ ++++|+|+|
T Consensus 205 -------~~~~~~-~~~i~~~G~~~~~Kg~~~li~a~~~l~~~----------------------------~~~~l~i~G 248 (394)
T 2jjm_A 205 -------YGISES-EKILIHISNFRKVKRVQDVVQAFAKIVTE----------------------------VDAKLLLVG 248 (394)
T ss_dssp -------TTCC----CEEEEECCCCGGGTHHHHHHHHHHHHHS----------------------------SCCEEEEEC
T ss_pred -------cCCCCC-CeEEEEeeccccccCHHHHHHHHHHHHhh----------------------------CCCEEEEEC
Confidence 122233 34899999999999999999999998763 468999999
Q ss_pred CCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccc
Q 014316 324 KGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEEL 402 (427)
Q Consensus 324 ~G~~~~~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~ 402 (427)
+|+..++++++++++++ ++|.|+|. .+++.++|+.||++|+| |..|++|++++||||||+|||+|+.||..|+
T Consensus 249 ~g~~~~~l~~~~~~~~l~~~v~~~g~---~~~~~~~~~~adv~v~p---s~~e~~~~~~~EAma~G~PvI~~~~~~~~e~ 322 (394)
T 2jjm_A 249 DGPEFCTILQLVKNLHIEDRVLFLGK---QDNVAELLAMSDLMLLL---SEKESFGLVLLEAMACGVPCIGTRVGGIPEV 322 (394)
T ss_dssp CCTTHHHHHHHHHTTTCGGGBCCCBS---CSCTHHHHHTCSEEEEC---CSCCSCCHHHHHHHHTTCCEEEECCTTSTTT
T ss_pred CchHHHHHHHHHHHcCCCCeEEEeCc---hhhHHHHHHhCCEEEec---cccCCCchHHHHHHhcCCCEEEecCCChHHH
Confidence 99999999999999998 48999996 79999999999999997 7789999999999999999999999999999
Q ss_pred eecCCcEEEeC--ChHHHHHHHHHhc
Q 014316 403 VKVDKNGLLFS--SSSELADQLLVNA 426 (427)
Q Consensus 403 v~~~~~G~l~~--~~~~la~~l~~~~ 426 (427)
+.++.+|++++ |+++++++|.++.
T Consensus 323 v~~~~~g~~~~~~d~~~la~~i~~l~ 348 (394)
T 2jjm_A 323 IQHGDTGYLCEVGDTTGVADQAIQLL 348 (394)
T ss_dssp CCBTTTEEEECTTCHHHHHHHHHHHH
T ss_pred hhcCCceEEeCCCCHHHHHHHHHHHH
Confidence 99999999994 8899999998763
No 6
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=100.00 E-value=8.8e-35 Score=291.91 Aligned_cols=318 Identities=15% Similarity=0.136 Sum_probs=220.8
Q ss_pred CcceEEEEEeCCC---CCCh-hHHHHHHHHHhhCCCcEEEEecCCCCC-cccccCCCceEEEEeecCCCCCCCCcchhhH
Q 014316 3 RRGRACVVVLGDL---GRSP-RMQYQALSLARQMSLEVDVVAYGGSKP-HAAILEHPSIHIHTMTQWPTIPRGLPKVLKP 77 (427)
Q Consensus 3 ~~~~~~v~~~~~~---~~~~-r~~~~a~~La~~~g~~V~vi~~~~~~~-~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~ 77 (427)
+|++++++..... |+.+ .+...+..|++. ||+|++++...... ........+ ++++++.... ...+......
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~ 95 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDA-GHEVSVLAPASPHVKLPDYVVSGG-KAVPIPYNGS-VARLRFGPAT 95 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHHT-TCEEEEEESCCTTSCCCTTEEECC-CCC-------------CCHHH
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHHC-CCeEEEEecCCccccCCcccccCC-cEEeccccCC-cccccccHHH
Confidence 4566666653322 2222 244566777775 99999999765432 111111122 4444441100 0000001111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHH
Q 014316 78 VLLLLKPLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYR 157 (427)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~ 157 (427)
...+.+.+ +..+||+||++++..... +.++++..++|+|+++|+... .......+.+
T Consensus 96 ~~~l~~~l------------~~~~~Dii~~~~~~~~~~---~~~~~~~~~~~~i~~~h~~~~--------~~~~~~~~~~ 152 (406)
T 2gek_A 96 HRKVKKWI------------AEGDFDVLHIHEPNAPSL---SMLALQAAEGPIVATFHTSTT--------KSLTLSVFQG 152 (406)
T ss_dssp HHHHHHHH------------HHHCCSEEEEECCCSSSH---HHHHHHHEESSEEEEECCCCC--------SHHHHHHHHS
T ss_pred HHHHHHHH------------HhcCCCEEEECCccchHH---HHHHHHhcCCCEEEEEcCcch--------hhhhHHHHHH
Confidence 11222222 226899999998654432 445566678999999999732 1112233334
Q ss_pred HHHHHHhccCCEEEEcCHHHHHHHHHhhCCe-EEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCC
Q 014316 158 WIEKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEG 235 (427)
Q Consensus 158 ~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (427)
+++ .+.+.+|.++++|+..++.+.+.++.+ + +|+|+ +.+.|.+...
T Consensus 153 ~~~-~~~~~~d~ii~~s~~~~~~~~~~~~~~~~-vi~~~v~~~~~~~~~~------------------------------ 200 (406)
T 2gek_A 153 ILR-PYHEKIIGRIAVSDLARRWQMEALGSDAV-EIPNGVDVASFADAPL------------------------------ 200 (406)
T ss_dssp TTH-HHHTTCSEEEESSHHHHHHHHHHHSSCEE-ECCCCBCHHHHHTCCC------------------------------
T ss_pred HHH-HHHhhCCEEEECCHHHHHHHHHhcCCCcE-EecCCCChhhcCCCch------------------------------
Confidence 444 667899999999999999998877765 7 99998 5444432210
Q ss_pred CCccchhhhcccccccccCCCCCeEEEEEeec-CCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCC
Q 014316 236 QKADETIFTSLAGIDVFLKPNRPALVVSSTSW-TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLY 314 (427)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~-~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (427)
....+.++ ..|+|+|++ .+.||++.+++|++.+.++ .
T Consensus 201 --------------~~~~~~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~---------------------------~ 238 (406)
T 2gek_A 201 --------------LDGYPREG-RTVLFLGRYDEPRKGMAVLLAALPKLVAR---------------------------F 238 (406)
T ss_dssp --------------CTTCSCSS-CEEEEESCTTSGGGCHHHHHHHHHHHHTT---------------------------S
T ss_pred --------------hhhccCCC-eEEEEEeeeCccccCHHHHHHHHHHHHHH---------------------------C
Confidence 00122233 489999999 9999999999999998765 6
Q ss_pred CCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCC-CCCCchHHHHHHcCCCcEEE
Q 014316 315 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-GLDLPMKVVDMFGCGLPVCA 393 (427)
Q Consensus 315 ~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~-~e~~p~~~lEama~G~PVIa 393 (427)
|+++|+|+|+|+. +.++++++++ -++|.|+|. ++.+++.++|+.||++|+| |. .|++|++++|||+||+|||+
T Consensus 239 ~~~~l~i~G~~~~-~~l~~~~~~~-~~~v~~~g~-~~~~~~~~~~~~adv~v~p---s~~~e~~~~~~~Ea~a~G~PvI~ 312 (406)
T 2gek_A 239 PDVEILIVGRGDE-DELREQAGDL-AGHLRFLGQ-VDDATKASAMRSADVYCAP---HLGGESFGIVLVEAMAAGTAVVA 312 (406)
T ss_dssp TTCEEEEESCSCH-HHHHHHTGGG-GGGEEECCS-CCHHHHHHHHHHSSEEEEC---CCSCCSSCHHHHHHHHHTCEEEE
T ss_pred CCeEEEEEcCCcH-HHHHHHHHhc-cCcEEEEec-CCHHHHHHHHHHCCEEEec---CCCCCCCchHHHHHHHcCCCEEE
Confidence 8999999999988 8888888877 458999997 9999999999999999997 65 79999999999999999999
Q ss_pred eccCccccceecCCcEEEe--CChHHHHHHHHHhc
Q 014316 394 VSYSCIEELVKVDKNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 394 s~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~~ 426 (427)
|+.||..|++.++.+|+++ +|+++++++|.++.
T Consensus 313 ~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~ 347 (406)
T 2gek_A 313 SDLDAFRRVLADGDAGRLVPVDDADGMAAALIGIL 347 (406)
T ss_dssp CCCHHHHHHHTTTTSSEECCTTCHHHHHHHHHHHH
T ss_pred ecCCcHHHHhcCCCceEEeCCCCHHHHHHHHHHHH
Confidence 9999999999999999999 68899999998763
No 7
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=100.00 E-value=1.2e-34 Score=287.67 Aligned_cols=311 Identities=14% Similarity=0.105 Sum_probs=216.8
Q ss_pred CCCChh-HHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Q 014316 15 LGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLW 93 (427)
Q Consensus 15 ~~~~~r-~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (427)
.|+.++ +...+..|+++ ||+|+|+|....... ..++++++++ .. ......+ ..+.... +.
T Consensus 13 ~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~-----~~~~~v~~~~--~~---~~~~~~~----~~~~~~~----l~ 73 (374)
T 2iw1_A 13 FGGLQRDFMRIASTVAAR-GHHVRVYTQSWEGDC-----PKAFELIQVP--VK---SHTNHGR----NAEYYAW----VQ 73 (374)
T ss_dssp TCHHHHHHHHHHHHHHHT-TCCEEEEESEECSCC-----CTTCEEEECC--CC---CSSHHHH----HHHHHHH----HH
T ss_pred CcchhhHHHHHHHHHHhC-CCeEEEEecCCCCCC-----CCCcEEEEEc--cC---cccchhh----HHHHHHH----HH
Confidence 444443 45566778886 999999997632211 2388999888 22 1111111 1111111 11
Q ss_pred HHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhc--cCCEEE
Q 014316 94 FLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGK--MANGCL 171 (427)
Q Consensus 94 ~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~--~ad~vi 171 (427)
.+ .+..+||+||+|++.... . +.+.+...+++.+.+.|++.. ......+.+.++++...+ .+|.++
T Consensus 74 ~~-i~~~~~Dvv~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~d~ii 141 (374)
T 2iw1_A 74 NH-LKEHPADRVVGFNKMPGL--D-VYFAADVCYAEKVAQEKGFLY--------RLTSRYRHYAAFERATFEQGKSTKLM 141 (374)
T ss_dssp HH-HHHSCCSEEEESSCCTTC--S-EEECCSCCHHHHHHHHCCHHH--------HTSHHHHHHHHHHHHHHSTTCCCEEE
T ss_pred HH-HhccCCCEEEEecCCCCc--e-eeeccccccceeeeecccchh--------hhcHHHHHHHHHHHHHhhccCCcEEE
Confidence 11 133799999999732211 0 111112222333333444311 111223445667776665 699999
Q ss_pred EcCHHHHHHHHHhhCCe---EEEecCC-CCCCcCCCCh-HHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcc
Q 014316 172 CVTQAMQHELAQNWGIK---ATVLYDQ-PPEFFHPTSL-EEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSL 246 (427)
Q Consensus 172 ~vS~~~~~~l~~~~~~~---~~vi~n~-~~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (427)
++|+.+++.+.+.++.+ +.++||+ +.+.|.+... ..+.++..+
T Consensus 142 ~~s~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~-------------------------------- 189 (374)
T 2iw1_A 142 MLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQK-------------------------------- 189 (374)
T ss_dssp ESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHH--------------------------------
T ss_pred EcCHHHHHHHHHHhCCChhheEEecCCcCHHhcCcccchhHHHHHHHH--------------------------------
Confidence 99999999998877753 8999999 7666654331 122222222
Q ss_pred cccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCC
Q 014316 247 AGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP 326 (427)
Q Consensus 247 ~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~ 326 (427)
++.+.+ ..+++|+|++.+.||++.+++|++.+.+. ..++++|+|+|+|+
T Consensus 190 ----~~~~~~-~~~i~~~G~~~~~K~~~~li~a~~~l~~~--------------------------~~~~~~l~i~G~g~ 238 (374)
T 2iw1_A 190 ----NGIKEQ-QNLLLQVGSDFGRKGVDRSIEALASLPES--------------------------LRHNTLLFVVGQDK 238 (374)
T ss_dssp ----TTCCTT-CEEEEEECSCTTTTTHHHHHHHHHTSCHH--------------------------HHHTEEEEEESSSC
T ss_pred ----hCCCCC-CeEEEEeccchhhcCHHHHHHHHHHhHhc--------------------------cCCceEEEEEcCCC
Confidence 233333 45899999999999999999999998653 12579999999998
Q ss_pred ChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceec
Q 014316 327 DKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV 405 (427)
Q Consensus 327 ~~~~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~ 405 (427)
.++++++++++++ ++|.|+|. .+++.++|+.||++|+| |..|++|++++||||||+|||+|+.||..|++.+
T Consensus 239 -~~~~~~~~~~~~~~~~v~~~g~---~~~~~~~~~~ad~~v~p---s~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~ 311 (374)
T 2iw1_A 239 -PRKFEALAEKLGVRSNVHFFSG---RNDVSELMAAADLLLHP---AYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIAD 311 (374)
T ss_dssp -CHHHHHHHHHHTCGGGEEEESC---CSCHHHHHHHCSEEEEC---CSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHH
T ss_pred -HHHHHHHHHHcCCCCcEEECCC---cccHHHHHHhcCEEEec---cccCCcccHHHHHHHCCCCEEEecCCCchhhhcc
Confidence 4788999999998 48999997 78999999999999997 7789999999999999999999999999999999
Q ss_pred CCcEEEeC---ChHHHHHHHHHhc
Q 014316 406 DKNGLLFS---SSSELADQLLVNA 426 (427)
Q Consensus 406 ~~~G~l~~---~~~~la~~l~~~~ 426 (427)
+.+|++++ |+++++++|.++.
T Consensus 312 ~~~g~~~~~~~~~~~l~~~i~~l~ 335 (374)
T 2iw1_A 312 ANCGTVIAEPFSQEQLNEVLRKAL 335 (374)
T ss_dssp HTCEEEECSSCCHHHHHHHHHHHH
T ss_pred CCceEEeCCCCCHHHHHHHHHHHH
Confidence 99999995 7899999998763
No 8
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=100.00 E-value=6.1e-34 Score=294.09 Aligned_cols=254 Identities=12% Similarity=0.073 Sum_probs=189.8
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhh--cCCcEEEEecccchhhh-h---h-hcCCC-chH----HHH--HHHHHHHHh
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSL--RRSAFIVDWHNFGYTLL-S---L-SLGRR-SHF----VSI--YRWIEKYYG 164 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~--~~~p~i~~~h~~~~~~~-~---~-~~~~~-~~~----~~~--~~~~e~~~~ 164 (427)
..+||+||+|+ ....+++.++++. .++|+|+++|+..+... . . ..+.. ..+ ... ..++++.+.
T Consensus 128 ~~~~DiIh~~~---~~~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (485)
T 1rzu_A 128 GWRPDMVHAHD---WQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGL 204 (485)
T ss_dssp SCCCSEEEEEH---HHHTTHHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHH
T ss_pred CCCCCEEEecc---cchhHHHHHHhhcccCCCCEEEEecCccccCCCCHHHHhhcCCChhhcccccccccccccHHHHHH
Confidence 46899999998 3333335555654 79999999999743110 0 0 00000 000 000 124567778
Q ss_pred ccCCEEEEcCHHHHHHHHHh-hC-----------CeEEEecCC-CCCCcCCCChH----------------HHHHHHhhh
Q 014316 165 KMANGCLCVTQAMQHELAQN-WG-----------IKATVLYDQ-PPEFFHPTSLE----------------EKHELFCRL 215 (427)
Q Consensus 165 ~~ad~vi~vS~~~~~~l~~~-~~-----------~~~~vi~n~-~~~~f~~~~~~----------------~~~~~~~~~ 215 (427)
+.+|.++++|+.+++.+.+. +| .++.+|||| |.+.|.+.... .+.++
T Consensus 205 ~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 280 (485)
T 1rzu_A 205 QTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAV---- 280 (485)
T ss_dssp HHCSEEEESCHHHHHHTTSHHHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHH----
T ss_pred hhcCEEEecCHhHHHHHhccccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHH----
Confidence 89999999999999988664 33 349999999 77777654311 11222
Q ss_pred hhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCC
Q 014316 216 NKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDD 295 (427)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~ 295 (427)
+++++++.+...+|+|+||+.+.||++.|++|++.+.+
T Consensus 281 --------------------------------r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~---------- 318 (485)
T 1rzu_A 281 --------------------------------AEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVS---------- 318 (485)
T ss_dssp --------------------------------HHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHH----------
T ss_pred --------------------------------HHhcCCCCCCCeEEEEEccCccccCHHHHHHHHHHHHh----------
Confidence 22234444323489999999999999999999999864
Q ss_pred CchhhhhhhhhcCCcccCCCCEEEEEEeCCC--ChHHHHHHHHHcCCCcEE-EecCCCCcccHHHHHhcCcEEEeeccCC
Q 014316 296 STNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRVA-FRTMWLSAEDYPLLLGSADLGVCLHTSS 372 (427)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~--~~~~~~~~~~~l~l~~V~-f~g~~~~~~~~~~~l~~adi~v~p~~~s 372 (427)
++++|+|+|+|+ ..+.+++++++++ ++|. |.|. +.+++.++|++||++|+| |
T Consensus 319 -------------------~~~~l~ivG~g~~~~~~~l~~~~~~~~-~~v~~~~g~--~~~~~~~~~~~adv~v~p---S 373 (485)
T 1rzu_A 319 -------------------LGGRLVVLGAGDVALEGALLAAASRHH-GRVGVAIGY--NEPLSHLMQAGCDAIIIP---S 373 (485)
T ss_dssp -------------------TTCEEEEEECBCHHHHHHHHHHHHHTT-TTEEEEESC--CHHHHHHHHHHCSEEEEC---C
T ss_pred -------------------cCceEEEEeCCchHHHHHHHHHHHhCC-CcEEEecCC--CHHHHHHHHhcCCEEEEC---c
Confidence 379999999997 3678888888886 6887 6775 677779999999999997 7
Q ss_pred CCCCCchHHHHHHcCCCcEEEeccCccccceecC---------CcEEEe--CChHHHHHHHHHhc
Q 014316 373 SGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD---------KNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 373 ~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~---------~~G~l~--~~~~~la~~l~~~~ 426 (427)
..|+||++++||||||+|||+|+.||++|++.++ .+|+++ +|+++||++|.++.
T Consensus 374 ~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll 438 (485)
T 1rzu_A 374 RFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTV 438 (485)
T ss_dssp SCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEeCCCCHHHHHHHHHHHH
Confidence 7899999999999999999999999999999998 899999 47899999998763
No 9
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=100.00 E-value=1.3e-33 Score=291.67 Aligned_cols=253 Identities=15% Similarity=0.109 Sum_probs=189.2
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHH-hhcCCcEEEEecccchhhh-h---h-hcCCC-chH------HHHHHHHHHHHhcc
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWAS-SLRRSAFIVDWHNFGYTLL-S---L-SLGRR-SHF------VSIYRWIEKYYGKM 166 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~-~~~~~p~i~~~h~~~~~~~-~---~-~~~~~-~~~------~~~~~~~e~~~~~~ 166 (427)
.+||+||+|++ ...+++.+++ +..++|+|+++|+..+... . . ..+.. ..+ .....++++.+.+.
T Consensus 128 ~~~Divh~~~~---~~~~~~~~~~~~~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (485)
T 2qzs_A 128 WRPDVVHAHDW---HAGLAPAYLAARGRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYY 204 (485)
T ss_dssp CCCSEEEEETG---GGTTHHHHHHHTTCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCSTTTTEETTEEEHHHHHHHH
T ss_pred CCCCEEEeecc---chhHHHHHHhhccCCCCEEEEecCccccCCCCHHHHHhcCCCchhcccccccccccccHHHHHHHh
Confidence 68999999983 2233344555 6779999999999743110 0 0 00000 000 00012456777789
Q ss_pred CCEEEEcCHHHHHHHHHh-hC-------------CeEEEecCC-CCCCcCCCChH----------------HHHHHHhhh
Q 014316 167 ANGCLCVTQAMQHELAQN-WG-------------IKATVLYDQ-PPEFFHPTSLE----------------EKHELFCRL 215 (427)
Q Consensus 167 ad~vi~vS~~~~~~l~~~-~~-------------~~~~vi~n~-~~~~f~~~~~~----------------~~~~~~~~~ 215 (427)
+|.++++|+.+++.+.+. ++ .++.+|||| |.+.|.+.... .+.++.
T Consensus 205 ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r--- 281 (485)
T 2qzs_A 205 ADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQ--- 281 (485)
T ss_dssp CSEEEESSHHHHHHTTSHHHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHH---
T ss_pred cCeEEecCHHHHHHHhccccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHH---
Confidence 999999999999988654 44 569999999 77777654210 112222
Q ss_pred hhcccCCCCccccccCCCCCCCccchhhhcccccccccCC-CCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccC
Q 014316 216 NKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP-NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNED 294 (427)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~ 294 (427)
++++++. .+..+|+|+||+.+.||++.|++|++.+.+
T Consensus 282 ---------------------------------~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~--------- 319 (485)
T 2qzs_A 282 ---------------------------------IAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLE--------- 319 (485)
T ss_dssp ---------------------------------HHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHH---------
T ss_pred ---------------------------------HHcCCCCCCCCeEEEEeccCccccCHHHHHHHHHHHhh---------
Confidence 2223333 133589999999999999999999999864
Q ss_pred CCchhhhhhhhhcCCcccCCCCEEEEEEeCCC--ChHHHHHHHHHcCCCcEE-EecCCCCcccHHHHHhcCcEEEeeccC
Q 014316 295 DSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRVA-FRTMWLSAEDYPLLLGSADLGVCLHTS 371 (427)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~--~~~~~~~~~~~l~l~~V~-f~g~~~~~~~~~~~l~~adi~v~p~~~ 371 (427)
++++|+|+|+|+ ..+.+++++++++ ++|. |.|. +.+++.++|++||++|+|
T Consensus 320 --------------------~~~~l~ivG~g~~~~~~~l~~~~~~~~-~~v~~~~g~--~~~~~~~~~~~adv~v~p--- 373 (485)
T 2qzs_A 320 --------------------QGGQLALLGAGDPVLQEGFLAAAAEYP-GQVGVQIGY--HEAFSHRIMGGADVILVP--- 373 (485)
T ss_dssp --------------------TTCEEEEEEEECHHHHHHHHHHHHHST-TTEEEEESC--CHHHHHHHHHHCSEEEEC---
T ss_pred --------------------CCcEEEEEeCCchHHHHHHHHHHHhCC-CcEEEeCCC--CHHHHHHHHHhCCEEEEC---
Confidence 279999999997 4678888888886 6886 7775 677779999999999997
Q ss_pred CCCCCCchHHHHHHcCCCcEEEeccCccccceecC---------CcEEEe--CChHHHHHHHHHhc
Q 014316 372 SSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVD---------KNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 372 s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~---------~~G~l~--~~~~~la~~l~~~~ 426 (427)
|..|+||++++||||||+|||+|++||.+|++.++ .+|+++ +|+++||++|.++.
T Consensus 374 S~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll 439 (485)
T 2qzs_A 374 SRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAF 439 (485)
T ss_dssp CSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHH
T ss_pred CccCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceEEECCCCHHHHHHHHHHHH
Confidence 77899999999999999999999999999999998 899999 48899999998763
No 10
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=100.00 E-value=5.5e-33 Score=303.24 Aligned_cols=270 Identities=11% Similarity=0.076 Sum_probs=196.5
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHH---H--HHHHHHHhccCCEEEEcC
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSI---Y--RWIEKYYGKMANGCLCVT 174 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~---~--~~~e~~~~~~ad~vi~vS 174 (427)
.+||+||+|. ..+.+++.++++..|+|+|+|.|+.+.............+... . ...|+.+++.||.|||+|
T Consensus 406 ~~PDVIHsH~---~~sglva~llar~~gvP~V~T~Hsl~~~k~~~~~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S 482 (816)
T 3s28_A 406 GKPDLIIGNY---SDGNLVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITST 482 (816)
T ss_dssp SCCSEEEEEH---HHHHHHHHHHHHHHTCCEEEECSCCHHHHSTTTTTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESC
T ss_pred CCCeEEEeCC---chHHHHHHHHHHHcCCCEEEEEecccccccccccchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECC
Confidence 4799999997 5666668888888999999999998432111100011111111 1 124777899999999999
Q ss_pred HHHHHHHHH---hhCC---------------------eEEEecCC-CCCCcCCCChHHH--HHHHhhhhhcccCCCCccc
Q 014316 175 QAMQHELAQ---NWGI---------------------KATVLYDQ-PPEFFHPTSLEEK--HELFCRLNKILHQPLGVQD 227 (427)
Q Consensus 175 ~~~~~~l~~---~~~~---------------------~~~vi~n~-~~~~f~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 227 (427)
+..++.+.+ .|+. ++.+|||| |.+.|.|...... ..+...+..
T Consensus 483 ~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~---------- 552 (816)
T 3s28_A 483 FQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEE---------- 552 (816)
T ss_dssp HHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHH----------
T ss_pred HHHHHHHHHHHHHhhhhhccccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccc----------
Confidence 999875221 1211 68999999 8888877542111 000000000
Q ss_pred cccCCCCCCCccchhh-hccccccccc-CCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhh
Q 014316 228 CVSNGMEGQKADETIF-TSLAGIDVFL-KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKE 305 (427)
Q Consensus 228 ~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 305 (427)
..| +...++.++. ...+..+|+|+||+.+.||++.|++|++.+.+.
T Consensus 553 -------------~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~------------------- 600 (816)
T 3s28_A 553 -------------LLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRL------------------- 600 (816)
T ss_dssp -------------HHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHH-------------------
T ss_pred -------------cccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhh-------------------
Confidence 000 0001122222 122334999999999999999999999999875
Q ss_pred hcCCcccCCCCEEEEEEeCCC-----------ChHHHHHHHHHcCC-CcEEEecC---CCCcccHHHHHh-cCcEEEeec
Q 014316 306 ISDGKQYLYPRLLFIITGKGP-----------DKESYEEKIRRLRL-KRVAFRTM---WLSAEDYPLLLG-SADLGVCLH 369 (427)
Q Consensus 306 ~~~~~~~~~~~~~l~i~G~G~-----------~~~~~~~~~~~l~l-~~V~f~g~---~~~~~~~~~~l~-~adi~v~p~ 369 (427)
.++++|+|+|+|+ ..+.++++++++++ ++|.|+|. +++.+++..+|. ++|++|+|
T Consensus 601 --------~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~P- 671 (816)
T 3s28_A 601 --------RELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQP- 671 (816)
T ss_dssp --------HHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEEC-
T ss_pred --------CCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEEC-
Confidence 5689999999998 45778899999999 48999995 133578999888 68999997
Q ss_pred cCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 370 TSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 370 ~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
|..|+||++++||||||+|||+|++||..|++.++.+|+++ +|++++|++|.++
T Consensus 672 --S~~EgfglvllEAMA~G~PVIasd~GG~~EiV~dg~~Gllv~p~D~e~LA~aI~~l 727 (816)
T 3s28_A 672 --ALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADF 727 (816)
T ss_dssp --CSCBSSCHHHHHHHHTTCCEEEESSBTHHHHCCBTTTBEEECTTSHHHHHHHHHHH
T ss_pred --CCccCccHHHHHHHHcCCCEEEeCCCChHHHHccCCcEEEeCCCCHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999 4789999998654
No 11
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=100.00 E-value=1.1e-33 Score=286.21 Aligned_cols=240 Identities=15% Similarity=0.209 Sum_probs=180.5
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEE-EcCHHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCL-CVTQAM 177 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi-~vS~~~ 177 (427)
..+||+||+|++.... + +.+++ .++|+|+++|+... ... ....+++++.+ +.+|.++ ++|+..
T Consensus 124 ~~~~Dvv~~~~~~~~~--~-~~~~~--~~~p~v~~~h~~~~-------~~~---~~~~~~~~~~~-~~~~~~i~~~s~~~ 187 (416)
T 2x6q_A 124 LSSFDYVLVHDPQPAA--L-IEFYE--KKSPWLWRCHIDLS-------SPN---REFWEFLRRFV-EKYDRYIFHLPEYV 187 (416)
T ss_dssp GGGSSEEEEESSTTGG--G-GGGSC--CCSCEEEECCSCCS-------SCC---HHHHHHHHHHH-TTSSEEEESSGGGS
T ss_pred hcCCCEEEEeccchhh--H-HHHHH--hcCCEEEEEccccC-------Ccc---HHHHHHHHHHH-HhCCEEEEechHHH
Confidence 3689999999854322 1 22222 24899999998732 111 12334455555 4566665 666655
Q ss_pred HHHHHHhhC-CeEEEecCC-CCCCcCCC--ChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccccccc
Q 014316 178 QHELAQNWG-IKATVLYDQ-PPEFFHPT--SLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFL 253 (427)
Q Consensus 178 ~~~l~~~~~-~~~~vi~n~-~~~~f~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (427)
++. +. .++.+|||| |...|.+. +.+.+.++..+ ++.
T Consensus 188 ~~~----~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~------------------------------------~~~ 227 (416)
T 2x6q_A 188 QPE----LDRNKAVIMPPSIDPLSEKNVELKQTEILRILER------------------------------------FDV 227 (416)
T ss_dssp CTT----SCTTTEEECCCCBCTTSTTTSCCCHHHHHHHHHH------------------------------------TTC
T ss_pred Hhh----CCccceEEeCCCCChhhhcccccChhhHHHHHHH------------------------------------hCC
Confidence 542 23 458899999 76555432 22333333222 233
Q ss_pred CCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCC-----h
Q 014316 254 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPD-----K 328 (427)
Q Consensus 254 ~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~-----~ 328 (427)
++++ .+|+|+||+.+.||++.|++|++.+.++ .|+++|+|+|+|+. .
T Consensus 228 ~~~~-~~i~~vGrl~~~Kg~~~li~a~~~l~~~---------------------------~~~~~l~i~G~g~~~~~~~~ 279 (416)
T 2x6q_A 228 DPEK-PIITQVSRFDPWKGIFDVIEIYRKVKEK---------------------------IPGVQLLLVGVMAHDDPEGW 279 (416)
T ss_dssp CTTS-CEEEEECCCCTTSCHHHHHHHHHHHHHH---------------------------CTTCEEEEEECCCTTCHHHH
T ss_pred CCCC-cEEEEEeccccccCHHHHHHHHHHHHHh---------------------------CCCeEEEEEecCcccchhHH
Confidence 3444 4899999999999999999999999887 78999999999975 4
Q ss_pred HHHHHHHHHcCC-CcEEEecC--CCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceec
Q 014316 329 ESYEEKIRRLRL-KRVAFRTM--WLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV 405 (427)
Q Consensus 329 ~~~~~~~~~l~l-~~V~f~g~--~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~ 405 (427)
+.++++++++++ ++|.|+|. .++.+++.++|++||++|+| |..|+||++++||||||+|||+|+.||.+|++.+
T Consensus 280 ~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~~~~~ad~~v~p---s~~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~ 356 (416)
T 2x6q_A 280 IYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQM---SIREGFGLTVTEAMWKGKPVIGRAVGGIKFQIVD 356 (416)
T ss_dssp HHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHHHHHHCSEEEEC---CSSCSSCHHHHHHHHTTCCEEEESCHHHHHHCCB
T ss_pred HHHHHHHHHhCCCCcEEEecccCCCCHHHHHHHHHhCCEEEEC---CCcCCCccHHHHHHHcCCCEEEccCCCChhheec
Confidence 567888999998 48999995 13367999999999999997 7789999999999999999999999999999999
Q ss_pred CCcEEEeCChHHHHHHHHHh
Q 014316 406 DKNGLLFSSSSELADQLLVN 425 (427)
Q Consensus 406 ~~~G~l~~~~~~la~~l~~~ 425 (427)
+.+|++++|+++++++|.++
T Consensus 357 ~~~g~l~~d~~~la~~i~~l 376 (416)
T 2x6q_A 357 GETGFLVRDANEAVEVVLYL 376 (416)
T ss_dssp TTTEEEESSHHHHHHHHHHH
T ss_pred CCCeEEECCHHHHHHHHHHH
Confidence 99999999999999999875
No 12
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=100.00 E-value=3.4e-33 Score=275.42 Aligned_cols=262 Identities=18% Similarity=0.121 Sum_probs=202.9
Q ss_pred CCChhH-HHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHH
Q 014316 16 GRSPRM-QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWF 94 (427)
Q Consensus 16 ~~~~r~-~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (427)
|+.++. ...+..|+++ ||+|++++....... ..++++++.+ .. ..+.+.+.
T Consensus 30 gG~~~~~~~l~~~L~~~-G~~v~v~~~~~~~~~-----~~~~~~~~~~----------~~----~~l~~~l~-------- 81 (342)
T 2iuy_A 30 GGIQWVVANLMDGLLEL-GHEVFLLGAPGSPAG-----RPGLTVVPAG----------EP----EEIERWLR-------- 81 (342)
T ss_dssp CHHHHHHHHHHHHHHHT-TCEEEEESCTTSCCC-----STTEEECSCC----------SH----HHHHHHHH--------
T ss_pred ChHHHHHHHHHHHHHHc-CCeEEEEecCCCCCC-----CCcceeccCC----------cH----HHHHHHHH--------
Confidence 444433 4456777775 999999997654321 2355543222 01 12223332
Q ss_pred HHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcC
Q 014316 95 LCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVT 174 (427)
Q Consensus 95 ~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS 174 (427)
..+||+||+|++.... ++++..++| |+++|+... . . ..+|.++++|
T Consensus 82 ----~~~~Dvi~~~~~~~~~------~~~~~~~~p-v~~~h~~~~-~------~----------------~~~d~ii~~S 127 (342)
T 2iuy_A 82 ----TADVDVVHDHSGGVIG------PAGLPPGTA-FISSHHFTT-R------P----------------VNPVGCTYSS 127 (342)
T ss_dssp ----HCCCSEEEECSSSSSC------STTCCTTCE-EEEEECSSS-B------C----------------SCCTTEEESC
T ss_pred ----hcCCCEEEECCchhhH------HHHhhcCCC-EEEecCCCC-C------c----------------ccceEEEEcC
Confidence 2799999999854321 125667999 999999832 1 1 1299999999
Q ss_pred HHHHHHHHHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccccccc
Q 014316 175 QAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFL 253 (427)
Q Consensus 175 ~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (427)
+.+++.+.+ ..++.+|||+ +.+.|.+.. ..
T Consensus 128 ~~~~~~~~~--~~~~~vi~ngvd~~~~~~~~-----------------------------------------------~~ 158 (342)
T 2iuy_A 128 RAQRAHCGG--GDDAPVIPIPVDPARYRSAA-----------------------------------------------DQ 158 (342)
T ss_dssp HHHHHHTTC--CTTSCBCCCCBCGGGSCCST-----------------------------------------------TC
T ss_pred HHHHHHHhc--CCceEEEcCCCChhhcCccc-----------------------------------------------cc
Confidence 999998866 5568899999 666664432 00
Q ss_pred CCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHH
Q 014316 254 KPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (427)
Q Consensus 254 ~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~ 333 (427)
.+++ ..|+|+||+.+.||++.+++|++.+ +++|+|+|+|+..+.+++
T Consensus 159 ~~~~-~~i~~vG~~~~~Kg~~~li~a~~~~--------------------------------~~~l~i~G~g~~~~~l~~ 205 (342)
T 2iuy_A 159 VAKE-DFLLFMGRVSPHKGALEAAAFAHAC--------------------------------GRRLVLAGPAWEPEYFDE 205 (342)
T ss_dssp CCCC-SCEEEESCCCGGGTHHHHHHHHHHH--------------------------------TCCEEEESCCCCHHHHHH
T ss_pred CCCC-CEEEEEeccccccCHHHHHHHHHhc--------------------------------CcEEEEEeCcccHHHHHH
Confidence 1122 3799999999999999999999874 488999999999999999
Q ss_pred HHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCC----------CCCCchHHHHHHcCCCcEEEeccCccccce
Q 014316 334 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS----------GLDLPMKVVDMFGCGLPVCAVSYSCIEELV 403 (427)
Q Consensus 334 ~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~----------~e~~p~~~lEama~G~PVIas~~~g~~e~v 403 (427)
++++++ ++|+|+|. ++.+++.++|++||++|+| |. .|+||++++||||||+|||+|+.||.+|++
T Consensus 206 ~~~~~~-~~v~~~g~-~~~~~l~~~~~~adv~v~p---s~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~ 280 (342)
T 2iuy_A 206 ITRRYG-STVEPIGE-VGGERRLDLLASAHAVLAM---SQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIV 280 (342)
T ss_dssp HHHHHT-TTEEECCC-CCHHHHHHHHHHCSEEEEC---CCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHG
T ss_pred HHHHhC-CCEEEecc-CCHHHHHHHHHhCCEEEEC---CcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHh
Confidence 999988 89999997 9999999999999999998 65 699999999999999999999999999999
Q ss_pred ec--CCcEEEeC-ChHHHHHHHHHhc
Q 014316 404 KV--DKNGLLFS-SSSELADQLLVNA 426 (427)
Q Consensus 404 ~~--~~~G~l~~-~~~~la~~l~~~~ 426 (427)
.+ +.+|++++ |+++++++|.++.
T Consensus 281 ~~~~~~~g~~~~~d~~~l~~~i~~l~ 306 (342)
T 2iuy_A 281 PSVGEVVGYGTDFAPDEARRTLAGLP 306 (342)
T ss_dssp GGGEEECCSSSCCCHHHHHHHHHTSC
T ss_pred cccCCCceEEcCCCHHHHHHHHHHHH
Confidence 99 99999997 8999999998764
No 13
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=99.97 E-value=1.6e-30 Score=262.50 Aligned_cols=231 Identities=13% Similarity=0.184 Sum_probs=183.0
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCC----cEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCC--EEEEc
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRS----AFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMAN--GCLCV 173 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~----p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad--~vi~v 173 (427)
.+||+||+|+ ..... +.+++...++ +++..+|.... ..... .+++.+.+| .++++
T Consensus 80 ~~~Div~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~--------~~~~~~~~~~~~ii~~ 140 (413)
T 3oy2_A 80 HKPDIVMIYN---DPIVI-GNYLLAMGKCSHRTKIVLYVDLVSK-------NIREN--------LWWIFSHPKVVGVMAM 140 (413)
T ss_dssp HCCSEEEEEE---CHHHH-HHHHHHGGGCCSCCEEEEEECCCSB-------SCCGG--------GGGGGGCTTEEEEEES
T ss_pred cCCCEEEEcc---hHHHH-HHHHHHhccCCCCCceeeeccccch-------hhHHH--------HHHHHhccCCceEEEc
Confidence 7999999996 33333 4455555554 45556665521 01111 256678888 99999
Q ss_pred CHHHHHHHHHhhCC--eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccc
Q 014316 174 TQAMQHELAQNWGI--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGID 250 (427)
Q Consensus 174 S~~~~~~l~~~~~~--~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (427)
|+.+++.+.+ ++. ++.+|||| +.+.|. ..+.+
T Consensus 141 S~~~~~~~~~-~~~~~~~~vi~ngvd~~~~~----~~~~~---------------------------------------- 175 (413)
T 3oy2_A 141 SKCWISDICN-YGCKVPINIVSHFVDTKTIY----DARKL---------------------------------------- 175 (413)
T ss_dssp STHHHHHHHH-TTCCSCEEECCCCCCCCCCT----THHHH----------------------------------------
T ss_pred CHHHHHHHHH-cCCCCceEEeCCCCCHHHHH----HHHHh----------------------------------------
Confidence 9999999988 554 49999999 766661 11111
Q ss_pred cccCC-CCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh-
Q 014316 251 VFLKP-NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK- 328 (427)
Q Consensus 251 ~~~~~-~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~- 328 (427)
.+.+. .+...|+|+||+.+.||++.+++|++.+.++ .|+++|+|+|+|+..
T Consensus 176 ~~~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~---------------------------~~~~~l~ivG~g~~~~ 228 (413)
T 3oy2_A 176 VGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISK---------------------------YPDAKVRFLCNSHHES 228 (413)
T ss_dssp TTCGGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHH---------------------------CTTCCEEEEEECCTTC
T ss_pred cCCCcccCceEEEEcCCCchhcCcHHHHHHHHHHHHh---------------------------CCCcEEEEEeCCcccc
Confidence 12222 1346899999999999999999999999887 889999999999865
Q ss_pred -----HHHHHHHHHcCCCc--------EEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 329 -----ESYEEKIRRLRLKR--------VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 329 -----~~~~~~~~~l~l~~--------V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
+.++++++++|+++ |.|.|. ++.+++.++|++||++|+| |..|+||++++||||||+|||+|+
T Consensus 229 ~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~-~~~~~~~~~~~~adv~v~p---S~~E~~~~~~lEAma~G~PvI~s~ 304 (413)
T 3oy2_A 229 KFDLHSIALRELVASGVDNVFTHLNKIMINRTV-LTDERVDMMYNACDVIVNC---SSGEGFGLCSAEGAVLGKPLIISA 304 (413)
T ss_dssp SCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSC-CCHHHHHHHHHHCSEEEEC---CSCCSSCHHHHHHHTTTCCEEEEC
T ss_pred hhhHHHHHHHHHHHcCcccccccccceeeccCc-CCHHHHHHHHHhCCEEEeC---CCcCCCCcHHHHHHHcCCCEEEcC
Confidence 88899999999974 777786 9999999999999999997 778999999999999999999999
Q ss_pred cCccccceecCCc---------------EE--Ee--CChHHHHHHHHHhc
Q 014316 396 YSCIEELVKVDKN---------------GL--LF--SSSSELADQLLVNA 426 (427)
Q Consensus 396 ~~g~~e~v~~~~~---------------G~--l~--~~~~~la~~l~~~~ 426 (427)
.||.+|++.++.+ |+ ++ +|+++||++| ++.
T Consensus 305 ~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~~la~~i-~l~ 353 (413)
T 3oy2_A 305 VGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAF-TFF 353 (413)
T ss_dssp CHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHHHHHHHH-HHT
T ss_pred CCChHHHHccCcccccccccccccccccCcceeeCCCCHHHHHHHH-HHh
Confidence 9999999999887 88 88 6899999999 764
No 14
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=99.97 E-value=1.1e-29 Score=267.14 Aligned_cols=256 Identities=16% Similarity=0.063 Sum_probs=179.0
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHh-------hcCCcEEEEecccchhh------hhhhcCCCchHHHH-----------
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASS-------LRRSAFIVDWHNFGYTL------LSLSLGRRSHFVSI----------- 155 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~-------~~~~p~i~~~h~~~~~~------~~~~~~~~~~~~~~----------- 155 (427)
..+||+|+|. +.+.++..+++. ..++|+|+|+|+..+.- ..............
T Consensus 152 ~~ddIiH~hD---W~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (536)
T 3vue_A 152 GEDVVFVCND---WHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVE 228 (536)
T ss_dssp CSCEEEEEES---GGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTC
T ss_pred CCCEEEEECc---chHHHHHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhccccccc
Confidence 3578889998 444443434332 24799999999875411 00000000000000
Q ss_pred --HHHHHHHHhccCCEEEEcCHHHHHHHHHhhC-----------CeEEEecCC-CCCCcCCCCh-------------HHH
Q 014316 156 --YRWIEKYYGKMANGCLCVTQAMQHELAQNWG-----------IKATVLYDQ-PPEFFHPTSL-------------EEK 208 (427)
Q Consensus 156 --~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~-----------~~~~vi~n~-~~~~f~~~~~-------------~~~ 208 (427)
.-.+++.....||.|++||+..++++.+.++ .++.+|+|| |.+.|.|... +.+
T Consensus 229 ~~~~n~~k~~i~~ad~v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K 308 (536)
T 3vue_A 229 GRKINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAK 308 (536)
T ss_dssp EEEEEHHHHHHHHCSEEEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHH
T ss_pred ccchhHHHHHHHhccEEEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhh
Confidence 0014566667899999999999999876543 138999999 8888876421 011
Q ss_pred HHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccccccc--CCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHH
Q 014316 209 HELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFL--KPNRPALVVSSTSWTPDEDFGILLEAALMYDRR 286 (427)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~ 286 (427)
..... .+.+..++ .++.| +|+|+||+.++||++.|++|++.+.+.
T Consensus 309 ~~~k~--------------------------------~l~~~~gl~~d~~~p-~i~~vgRl~~~Kg~~~li~a~~~l~~~ 355 (536)
T 3vue_A 309 ALNKE--------------------------------ALQAEAGLPVDRKIP-LIAFIGRLEEQKGPDVMAAAIPELMQE 355 (536)
T ss_dssp HHHHH--------------------------------HHHHHTTSCCCTTSC-EEEEECCBSGGGCHHHHHHHHHHHTTS
T ss_pred HHHHH--------------------------------HHHHhcCCCCCCCCc-EEEEEeeccccCChHHHHHHHHHhHhh
Confidence 11000 01111222 34445 899999999999999999999998643
Q ss_pred HhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChH--HHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcE
Q 014316 287 VAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKE--SYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADL 364 (427)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~--~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi 364 (427)
+.+|+++|.|+... .+++.+..++ .+|.|.+. .+.+++..+|++||+
T Consensus 356 -----------------------------~~~l~l~G~G~~~~~~~~~~~~~~~~-~~v~~~~~-~~~~~~~~~~~~aD~ 404 (536)
T 3vue_A 356 -----------------------------DVQIVLLGTGKKKFEKLLKSMEEKYP-GKVRAVVK-FNAPLAHLIMAGADV 404 (536)
T ss_dssp -----------------------------SCEEEEECCBCHHHHHHHHHHHHHST-TTEEEECS-CCHHHHHHHHHHCSE
T ss_pred -----------------------------CCeEEEEeccCchHHHHHHHHHhhcC-CceEEEEe-ccHHHHHHHHHhhhe
Confidence 67888888886433 3344444433 47999997 899999999999999
Q ss_pred EEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEe------------CChHHHHHHHHHh
Q 014316 365 GVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLF------------SSSSELADQLLVN 425 (427)
Q Consensus 365 ~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~------------~~~~~la~~l~~~ 425 (427)
+|+| |..|+||++++|||+||+|||+|++||++|+|.++.+|+.+ .|+++|+++|.+.
T Consensus 405 ~v~P---S~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ra 474 (536)
T 3vue_A 405 LAVP---SRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRA 474 (536)
T ss_dssp EEEC---CSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHH
T ss_pred eecc---cccCCCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHH
Confidence 9998 88899999999999999999999999999999999999954 3468899988653
No 15
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.96 E-value=8.2e-29 Score=245.59 Aligned_cols=301 Identities=17% Similarity=0.138 Sum_probs=198.4
Q ss_pred ceEEEEEeCCCCCChh-HHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHH
Q 014316 5 GRACVVVLGDLGRSPR-MQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLK 83 (427)
Q Consensus 5 ~~~~v~~~~~~~~~~r-~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (427)
++++++. ++.|+... +...+..|+++ ||+|+++|..... ........|++++.++... .... .....+..+.+
T Consensus 7 mkIl~~~-~~~gG~~~~~~~la~~L~~~-G~~V~v~~~~~~~-~~~~~~~~g~~~~~~~~~~--~~~~-~~~~~~~~~~~ 80 (364)
T 1f0k_A 7 KRLMVMA-GGTGGHVFPGLAVAHHLMAQ-GWQVRWLGTADRM-EADLVPKHGIEIDFIRISG--LRGK-GIKALIAAPLR 80 (364)
T ss_dssp CEEEEEC-CSSHHHHHHHHHHHHHHHTT-TCEEEEEECTTST-HHHHGGGGTCEEEECCCCC--CTTC-CHHHHHTCHHH
T ss_pred cEEEEEe-CCCccchhHHHHHHHHHHHc-CCEEEEEecCCcc-hhhhccccCCceEEecCCc--cCcC-ccHHHHHHHHH
Confidence 5666664 32332221 23566777775 9999999976532 2233344589998887311 1110 00111101111
Q ss_pred HHHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHH
Q 014316 84 PLIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYY 163 (427)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 163 (427)
.+..... +..++ +..+||+||++.+. ... .+.++++..++|+|++.|+. + .. +.++++
T Consensus 81 ~~~~~~~-l~~~l-~~~~pDvv~~~~~~--~~~-~~~~~~~~~~~p~v~~~~~~-~--------~~--------~~~~~~ 138 (364)
T 1f0k_A 81 IFNAWRQ-ARAIM-KAYKPDVVLGMGGY--VSG-PGGLAAWSLGIPVVLHEQNG-I--------AG--------LTNKWL 138 (364)
T ss_dssp HHHHHHH-HHHHH-HHHCCSEEEECSST--THH-HHHHHHHHTTCCEEEEECSS-S--------CC--------HHHHHH
T ss_pred HHHHHHH-HHHHH-HhcCCCEEEEeCCc--Cch-HHHHHHHHcCCCEEEEecCC-C--------Cc--------HHHHHH
Confidence 1111111 11111 33699999999743 222 25566777899999999986 2 10 234567
Q ss_pred hccCCEEEEcCHHHHHHHHHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchh
Q 014316 164 GKMANGCLCVTQAMQHELAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETI 242 (427)
Q Consensus 164 ~~~ad~vi~vS~~~~~~l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (427)
.+.+|.+++.++.. ++ ++.+++|+ +.+.|.+.. .+.+
T Consensus 139 ~~~~d~v~~~~~~~-------~~-~~~~i~n~v~~~~~~~~~--~~~~-------------------------------- 176 (364)
T 1f0k_A 139 AKIATKVMQAFPGA-------FP-NAEVVGNPVRTDVLALPL--PQQR-------------------------------- 176 (364)
T ss_dssp TTTCSEEEESSTTS-------SS-SCEECCCCCCHHHHTSCC--HHHH--------------------------------
T ss_pred HHhCCEEEecChhh-------cC-CceEeCCccchhhcccch--hhhh--------------------------------
Confidence 78899999988754 22 46788998 544443221 1111
Q ss_pred hhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEE-EEE
Q 014316 243 FTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL-FII 321 (427)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~i 321 (427)
+...++++.++++.|++.+.|+++.+++|++.+.+ +++ +++
T Consensus 177 --------~~~~~~~~~il~~~g~~~~~k~~~~li~a~~~l~~------------------------------~~~~l~i 218 (364)
T 1f0k_A 177 --------LAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGD------------------------------SVTIWHQ 218 (364)
T ss_dssp --------HTTCCSSEEEEEECTTTCCHHHHHHHHHHHHHHGG------------------------------GEEEEEE
T ss_pred --------cccCCCCcEEEEEcCchHhHHHHHHHHHHHHHhcC------------------------------CcEEEEE
Confidence 12334445466777899999999999999998742 577 577
Q ss_pred EeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccc-
Q 014316 322 TGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIE- 400 (427)
Q Consensus 322 ~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~- 400 (427)
+|+|+ .++++++++++++++|.|+|. + +++.++|+.||++|+| | + |++++|||+||+|||+++.+|.+
T Consensus 219 ~G~~~-~~~l~~~~~~~~~~~v~~~g~-~--~~~~~~~~~ad~~v~~---s-g---~~~~~EAma~G~Pvi~~~~~g~~~ 287 (364)
T 1f0k_A 219 SGKGS-QQSVEQAYAEAGQPQHKVTEF-I--DDMAAAYAWADVVVCR---S-G---ALTVSEIAAAGLPALFVPFQHKDR 287 (364)
T ss_dssp CCTTC-HHHHHHHHHHTTCTTSEEESC-C--SCHHHHHHHCSEEEEC---C-C---HHHHHHHHHHTCCEEECCCCCTTC
T ss_pred cCCch-HHHHHHHHhhcCCCceEEecc-h--hhHHHHHHhCCEEEEC---C-c---hHHHHHHHHhCCCEEEeeCCCCch
Confidence 89998 578888999998889999998 4 8999999999999996 4 2 89999999999999999999864
Q ss_pred -------cceecCCcEEEe--CC--hHHHHHHHHHh
Q 014316 401 -------ELVKVDKNGLLF--SS--SSELADQLLVN 425 (427)
Q Consensus 401 -------e~v~~~~~G~l~--~~--~~~la~~l~~~ 425 (427)
++++++ .|+++ +| +++|+++|.++
T Consensus 288 ~q~~~~~~~~~~g-~g~~~~~~d~~~~~la~~i~~l 322 (364)
T 1f0k_A 288 QQYWNALPLEKAG-AAKIIEQPQLSVDAVANTLAGW 322 (364)
T ss_dssp HHHHHHHHHHHTT-SEEECCGGGCCHHHHHHHHHTC
T ss_pred hHHHHHHHHHhCC-cEEEeccccCCHHHHHHHHHhc
Confidence 455444 59999 44 78999998754
No 16
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.96 E-value=3.9e-29 Score=254.97 Aligned_cols=228 Identities=14% Similarity=0.134 Sum_probs=167.2
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHH----h---hcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCC--EE
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWAS----S---LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMAN--GC 170 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~----~---~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad--~v 170 (427)
.++|+||+++ ..+...+..+. . ..+.|+++.+|++.. .. ..... .+.+++..++.++ .+
T Consensus 131 ~~~Dvv~a~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~----~~~~~----~~~~~~~~~~~~~~~~v 198 (413)
T 2x0d_A 131 AKHDIFIATA---WWTAYAAQRIVSWQSDTYGIPPNKILYIIQDFEP-GF----YQWSS----QYVLAESTYKYRGPQIA 198 (413)
T ss_dssp CTTEEEEECS---HHHHHHHHHHHHHHHHHHTCCCCCEEEEECSCGG-GG----SCSSH----HHHHHHHTTSCCSCEEE
T ss_pred CCCCEEEEeh---HHHHHHHHHhhhhhhhhcccccCcEEEEEeechh-hc----CccCh----HHHHHHHHhccCCceEE
Confidence 5799999987 44333232221 1 135688888888732 11 11111 1334556666665 58
Q ss_pred EEcCHHHHHHHHHh-hC-CeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccc
Q 014316 171 LCVTQAMQHELAQN-WG-IKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLA 247 (427)
Q Consensus 171 i~vS~~~~~~l~~~-~~-~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (427)
+++|+.+++.+.+. ++ .++.+++|+ +.+.|.+..
T Consensus 199 i~~S~~~~~~l~~~g~~~~~~~~i~~g~d~~~~~~~~------------------------------------------- 235 (413)
T 2x0d_A 199 VFNSELLKQYFNNKGYNFTDEYFFQPKINTTLKNYIN------------------------------------------- 235 (413)
T ss_dssp EEESHHHHHHHHHHTCCCSEEEEECCCCCHHHHTTTT-------------------------------------------
T ss_pred EEcCHHHHHHHHHcCCCCCceEEeCCCcCchhhcccc-------------------------------------------
Confidence 89999999999865 23 237788887 433332110
Q ss_pred ccccccCCCCCeEEEEEeec-CCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCC---EEEEEEe
Q 014316 248 GIDVFLKPNRPALVVSSTSW-TPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR---LLFIITG 323 (427)
Q Consensus 248 ~~~~~~~~~~~~~i~~~g~~-~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~i~G 323 (427)
....+ ...++++||+ .+.||++.|++|++.+.+. .|+ ++|+++|
T Consensus 236 ----~~~~~-~~~il~~gr~~~~~Kg~~~li~A~~~l~~~---------------------------~~~~~~~~l~ivG 283 (413)
T 2x0d_A 236 ----DKRQK-EKIILVYGRPSVKRNAFTLIVEALKIFVQK---------------------------YDRSNEWKIISVG 283 (413)
T ss_dssp ----SCCCC-CSEEEEEECTTCGGGCHHHHHHHHHHHHHH---------------------------CTTGGGCEEEEEE
T ss_pred ----cccCC-CCEEEEEecCchhccCHHHHHHHHHHHHHh---------------------------CCCCCceEEEEEc
Confidence 11122 2378889996 6889999999999999876 564 8999999
Q ss_pred CCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccc
Q 014316 324 KGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEEL 402 (427)
Q Consensus 324 ~G~~~~~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~ 402 (427)
+|+.. .++++ ++|+|+|. ++.+++.++|++||++|+| |..|+||++++||||||+|||++ .+|..|+
T Consensus 284 ~~~~~-------~~l~~~~~v~f~G~-~~~~~l~~~~~~adv~v~p---S~~E~~g~~~lEAmA~G~PVV~~-~~g~~e~ 351 (413)
T 2x0d_A 284 EKHKD-------IALGKGIHLNSLGK-LTLEDYADLLKRSSIGISL---MISPHPSYPPLEMAHFGLRVITN-KYENKDL 351 (413)
T ss_dssp SCCCC-------EEEETTEEEEEEES-CCHHHHHHHHHHCCEEECC---CSSSSCCSHHHHHHHTTCEEEEE-CBTTBCG
T ss_pred CCchh-------hhcCCcCcEEEcCC-CCHHHHHHHHHhCCEEEEe---cCCCCCCcHHHHHHhCCCcEEEe-CCCcchh
Confidence 99764 24566 48999998 9999999999999999997 77899999999999999999995 5667899
Q ss_pred eecCCcEEEe--CChHHHHHHHHHhc
Q 014316 403 VKVDKNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 403 v~~~~~G~l~--~~~~~la~~l~~~~ 426 (427)
+.++.+|+++ +|+++||++|.++.
T Consensus 352 v~~~~~G~lv~~~d~~~la~ai~~ll 377 (413)
T 2x0d_A 352 SNWHSNIVSLEQLNPENIAETLVELC 377 (413)
T ss_dssp GGTBTTEEEESSCSHHHHHHHHHHHH
T ss_pred hhcCCCEEEeCCCCHHHHHHHHHHHH
Confidence 9999999999 68899999998763
No 17
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.96 E-value=1.4e-28 Score=250.13 Aligned_cols=215 Identities=12% Similarity=0.079 Sum_probs=162.1
Q ss_pred CCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHHH
Q 014316 101 SPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHE 180 (427)
Q Consensus 101 ~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~ 180 (427)
++|+||.++ ..... ...+++..++|+++++|+.... .. .. . ....+++++...+.+|.++++|+.+++.
T Consensus 124 ~~DvIh~~~--~~~~~--~~~~~~~~~~p~v~~~h~~~~~-~~--~~-~---~~~~~~~~~~~~~~ad~vi~~S~~~~~~ 192 (406)
T 2hy7_A 124 ESDVIVFES--GIAVA--FIELAKRVNPAAKLVYRASDGL-ST--IN-V---ASYIEREFDRVAPTLDVIALVSPAMAAE 192 (406)
T ss_dssp HCSEEEEES--SGGGG--GHHHHHHHCTTSEEEEEESSCH-HH--HT-C---CHHHHHHHHHHGGGCSEEEESCGGGGGG
T ss_pred CCCEEEECC--chHHH--HHHHHHHhCCCEEEEEeccchh-hc--cc-c---cHHHHHHHHHHHHhCCEEEEcCHHHHHH
Confidence 699999543 22221 1134455689999999976320 00 01 1 1234667788889999999999999988
Q ss_pred HHHhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCe
Q 014316 181 LAQNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPA 259 (427)
Q Consensus 181 l~~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (427)
+.+. + ++.+|||| |.+.|.+.. ..+.+...
T Consensus 193 ~~~~-~-~i~vipngvd~~~f~~~~-----------------------------------------------~~~~~~~~ 223 (406)
T 2hy7_A 193 VVSR-D-NVFHVGHGVDHNLDQLGD-----------------------------------------------PSPYAEGI 223 (406)
T ss_dssp CSCS-T-TEEECCCCBCTTHHHHHC-----------------------------------------------SCSCCSSE
T ss_pred HHhc-C-CEEEEcCCcChHhcCccc-----------------------------------------------ccccCCCc
Confidence 7653 4 89999999 655553211 00122225
Q ss_pred EEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHHHHcC
Q 014316 260 LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLR 339 (427)
Q Consensus 260 ~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~~~l~ 339 (427)
.++|+||+.+.||+ ++.+.+. .|+++|+|+|+|+ +++++
T Consensus 224 ~i~~vGrl~~~Kg~------~~~l~~~---------------------------~~~~~l~ivG~g~--------~~~~~ 262 (406)
T 2hy7_A 224 HAVAVGSMLFDPEF------FVVASKA---------------------------FPQVTFHVIGSGM--------GRHPG 262 (406)
T ss_dssp EEEEECCTTBCHHH------HHHHHHH---------------------------CTTEEEEEESCSS--------CCCTT
T ss_pred EEEEEeccccccCH------HHHHHHh---------------------------CCCeEEEEEeCch--------HHhcC
Confidence 89999999999998 3333343 6899999999997 55667
Q ss_pred C-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHH-------cCCCcEEEeccCccccceecCCcEEE
Q 014316 340 L-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMF-------GCGLPVCAVSYSCIEELVKVDKNGLL 411 (427)
Q Consensus 340 l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEam-------a~G~PVIas~~~g~~e~v~~~~~G~l 411 (427)
+ ++|+|+|. ++.+++.++|++||++|+| |..|++|++++||| |||+|||+|+. +.++.+|++
T Consensus 263 l~~~V~f~G~-~~~~~l~~~~~~adv~v~p---s~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~------v~~~~~G~l 332 (406)
T 2hy7_A 263 YGDNVIVYGE-MKHAQTIGYIKHARFGIAP---YASEQVPVYLADSSMKLLQYDFFGLPAVCPNA------VVGPYKSRF 332 (406)
T ss_dssp CCTTEEEECC-CCHHHHHHHHHTCSEEECC---BSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG------GTCSCSSEE
T ss_pred CCCCEEEcCC-CCHHHHHHHHHhcCEEEEC---CCcccCchHHHHHHHHHHHHhhCCCcEEEehh------cccCcceEE
Confidence 7 48999997 9999999999999999997 77899999999999 99999999988 667889999
Q ss_pred -e--CChHHHHHHHHHhc
Q 014316 412 -F--SSSSELADQLLVNA 426 (427)
Q Consensus 412 -~--~~~~~la~~l~~~~ 426 (427)
+ +|+++||++|.++.
T Consensus 333 ~v~~~d~~~la~ai~~ll 350 (406)
T 2hy7_A 333 GYTPGNADSVIAAITQAL 350 (406)
T ss_dssp EECTTCHHHHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHHHHH
Confidence 8 68999999998763
No 18
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.95 E-value=6.7e-27 Score=232.47 Aligned_cols=237 Identities=12% Similarity=-0.001 Sum_probs=167.6
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
.+||+||+|++. ...+.+.++++..++|++++.|+. .. ......+. ....++.+.+.+|.++++|+..++
T Consensus 94 ~~pDvv~~~~~~--~~~~~~~~~~~~~~ip~v~~~~~~-~~-----~~~~~~~~--~~~~~~~~~~~~d~ii~~s~~~~~ 163 (375)
T 3beo_A 94 AKPDIVLVHGDT--TTTFIASLAAFYNQIPVGHVEAGL-RT-----WDKYSPYP--EEMNRQLTGVMADLHFSPTAKSAT 163 (375)
T ss_dssp HCCSEEEEETTS--HHHHHHHHHHHHTTCCEEEESCCC-CC-----SCTTSSTT--HHHHHHHHHHHCSEEEESSHHHHH
T ss_pred hCCCEEEEeCCc--hHHHHHHHHHHHHCCCEEEEeccc-cc-----ccccCCCh--hHhhhhHHhhhhheeeCCCHHHHH
Confidence 799999998732 233335567778899999877765 21 01101110 122333455679999999999999
Q ss_pred HHHHhhCCe---EEEecCC--CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccC
Q 014316 180 ELAQNWGIK---ATVLYDQ--PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLK 254 (427)
Q Consensus 180 ~l~~~~~~~---~~vi~n~--~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (427)
.+.+ +|.+ +.+++|+ |...+.+... ....+. . .+
T Consensus 164 ~~~~-~g~~~~~i~vi~n~~~d~~~~~~~~~---------------------------------~~~~~~----~--~~- 202 (375)
T 3beo_A 164 NLQK-ENKDESRIFITGNTAIDALKTTVKET---------------------------------YSHPVL----E--KL- 202 (375)
T ss_dssp HHHH-TTCCGGGEEECCCHHHHHHHHHCCSS---------------------------------CCCHHH----H--TT-
T ss_pred HHHH-cCCCcccEEEECChhHhhhhhhhhhh---------------------------------hhHHHH----H--hc-
Confidence 8876 4553 8899987 3222211100 000000 0 11
Q ss_pred CCCCeEEEEEeecCCC-CCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHH
Q 014316 255 PNRPALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~-K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~ 333 (427)
++++.+++++||+.+. ||++.|++|++.+.++ .|++++++ |+|+. +.+++
T Consensus 203 ~~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~---------------------------~~~~~~i~-~~g~~-~~~~~ 253 (375)
T 3beo_A 203 GNNRLVLMTAHRRENLGEPMRNMFRAIKRLVDK---------------------------HEDVQVVY-PVHMN-PVVRE 253 (375)
T ss_dssp TTSEEEEEECCCGGGTTHHHHHHHHHHHHHHHH---------------------------CTTEEEEE-ECCSC-HHHHH
T ss_pred cCCCeEEEEecccccchhHHHHHHHHHHHHHhh---------------------------CCCeEEEE-eCCCC-HHHHH
Confidence 2345578899999876 9999999999999876 78898654 77775 34555
Q ss_pred HHHHc-CC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec-cCccccceecCCcEE
Q 014316 334 KIRRL-RL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS-YSCIEELVKVDKNGL 410 (427)
Q Consensus 334 ~~~~l-~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~-~~g~~e~v~~~~~G~ 410 (427)
.++++ +. ++|.|+|. ++.+++..+|+.||++|+| | |.+++||||||+|||+++ .|+.+|+++++ +|+
T Consensus 254 ~~~~~~~~~~~v~~~g~-~~~~~~~~~~~~ad~~v~~---s-----g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~g-~g~ 323 (375)
T 3beo_A 254 TANDILGDYGRIHLIEP-LDVIDFHNVAARSYLMLTD---S-----GGVQEEAPSLGVPVLVLRDTTERPEGIEAG-TLK 323 (375)
T ss_dssp HHHHHHTTCTTEEEECC-CCHHHHHHHHHTCSEEEEC---C-----HHHHHHHHHHTCCEEECSSCCSCHHHHHTT-SEE
T ss_pred HHHHHhhccCCEEEeCC-CCHHHHHHHHHhCcEEEEC---C-----CChHHHHHhcCCCEEEecCCCCCceeecCC-ceE
Confidence 55554 43 58999996 8888999999999999986 4 667999999999999996 59999999877 999
Q ss_pred Ee-CChHHHHHHHHHhc
Q 014316 411 LF-SSSSELADQLLVNA 426 (427)
Q Consensus 411 l~-~~~~~la~~l~~~~ 426 (427)
++ .|+++|+++|.++.
T Consensus 324 ~v~~d~~~la~~i~~ll 340 (375)
T 3beo_A 324 LAGTDEETIFSLADELL 340 (375)
T ss_dssp ECCSCHHHHHHHHHHHH
T ss_pred EcCCCHHHHHHHHHHHH
Confidence 99 78899999998763
No 19
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.94 E-value=3.3e-26 Score=228.42 Aligned_cols=240 Identities=14% Similarity=0.071 Sum_probs=166.3
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
.+||+||+|++. ...+.+.++++..++|++++.|+... ......+. ......++.+.+|.++++|+..++
T Consensus 85 ~~pDvv~~~~~~--~~~~~~~~~a~~~~ip~v~~~~~~~~------~~~~~~~~--~~~~~~~~~~~~d~ii~~s~~~~~ 154 (384)
T 1vgv_A 85 FKPDVVLVHGDT--TTTLATSLAAFYQRIPVGHVEAGLRT------GDLYSPWP--EEANRTLTGHLAMYHFSPTETSRQ 154 (384)
T ss_dssp HCCSEEEEETTC--HHHHHHHHHHHTTTCCEEEESCCCCC------SCTTSSTT--HHHHHHHHHTTCSEEEESSHHHHH
T ss_pred hCCCEEEEeCCc--hHHHHHHHHHHHHCCCEEEEeccccc------ccccCCCc--hHhhHHHHHhhccEEEcCcHHHHH
Confidence 799999999731 22333556777889999999888621 01101110 011223345779999999999999
Q ss_pred HHHHhhCCe---EEEecCC--CCCCcCCCC----hHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccc
Q 014316 180 ELAQNWGIK---ATVLYDQ--PPEFFHPTS----LEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGID 250 (427)
Q Consensus 180 ~l~~~~~~~---~~vi~n~--~~~~f~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (427)
.+.+ +|.+ +.+++|+ +...+.+.. ...+.+ .+.+
T Consensus 155 ~l~~-~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~------------------------------------~~~~ 197 (384)
T 1vgv_A 155 NLLR-ENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSE------------------------------------LAAN 197 (384)
T ss_dssp HHHH-TTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHH------------------------------------HHTT
T ss_pred HHHH-cCCChhhEEEeCChHHHHHHhhhhccccchhhhHH------------------------------------HHHh
Confidence 8865 4653 8888887 211110000 000001 1112
Q ss_pred cc-cCCCCCeEEEEEeecCCC-CCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEE-eCCC-
Q 014316 251 VF-LKPNRPALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGP- 326 (427)
Q Consensus 251 ~~-~~~~~~~~i~~~g~~~~~-K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~-G~G~- 326 (427)
++ .+++++.+++++||+.+. ||++.|++|++.+.++ .|+++|+++ |.++
T Consensus 198 ~~~~~~~~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~---------------------------~~~~~l~i~~g~~~~ 250 (384)
T 1vgv_A 198 YPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATT---------------------------HQDIQIVYPVHLNPN 250 (384)
T ss_dssp CTTCCTTSEEEEEECCCBSSCCHHHHHHHHHHHHHHHH---------------------------CTTEEEEEECCBCHH
T ss_pred ccccCCCCCEEEEEeCCccccchHHHHHHHHHHHHHhh---------------------------CCCeEEEEEcCCCHH
Confidence 23 334455678899999876 9999999999999876 788998885 5443
Q ss_pred ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEecc-Cccccceec
Q 014316 327 DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY-SCIEELVKV 405 (427)
Q Consensus 327 ~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~-~g~~e~v~~ 405 (427)
..+.+++++.. .++|.|+|. ++.+++.++|+.||++|+| | |..++||||||+|||+++. |+..|++++
T Consensus 251 ~~~~l~~~~~~--~~~v~~~g~-~~~~~~~~~~~~ad~~v~~---S-----g~~~lEA~a~G~PvI~~~~~~~~~e~v~~ 319 (384)
T 1vgv_A 251 VREPVNRILGH--VKNVILIDP-QEYLPFVWLMNHAWLILTD---S-----GGIQEEAPSLGKPVLVMRDTTERPEAVTA 319 (384)
T ss_dssp HHHHHHHHHTT--CTTEEEECC-CCHHHHHHHHHHCSEEEES---S-----STGGGTGGGGTCCEEEESSCCSCHHHHHH
T ss_pred HHHHHHHHhhc--CCCEEEeCC-CCHHHHHHHHHhCcEEEEC---C-----cchHHHHHHcCCCEEEccCCCCcchhhhC
Confidence 23333333221 358999996 8889999999999999986 4 3358999999999999986 999999988
Q ss_pred CCcEEEe-CChHHHHHHHHHh
Q 014316 406 DKNGLLF-SSSSELADQLLVN 425 (427)
Q Consensus 406 ~~~G~l~-~~~~~la~~l~~~ 425 (427)
+ +|+++ .|+++|+++|.++
T Consensus 320 g-~g~lv~~d~~~la~~i~~l 339 (384)
T 1vgv_A 320 G-TVRLVGTDKQRIVEEVTRL 339 (384)
T ss_dssp T-SEEEECSSHHHHHHHHHHH
T ss_pred C-ceEEeCCCHHHHHHHHHHH
Confidence 8 99999 6889999998875
No 20
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.91 E-value=2.8e-24 Score=226.11 Aligned_cols=223 Identities=14% Similarity=0.102 Sum_probs=162.0
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
.+||+||.++.......+ +.++ .+..|+++++|++..+. + . ....+..+|.++++|+..++
T Consensus 281 ~~~Div~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~-----~--~---------~~~~~~~~d~~i~~s~~~~~ 341 (568)
T 2vsy_A 281 HGIDLLFDLRGWGGGGRP-EVFA--LRPAPVQVNWLAYPGTS-----G--A---------PWMDYVLGDAFALPPALEPF 341 (568)
T ss_dssp TTCSEEEECSSCTTCSSC-HHHH--TCCSSEEEEESSSSSCC-----C--C---------TTCCEEEECTTTSCTTTGGG
T ss_pred CCCCEEEECCCCCCcchH-HHHh--cCCCceeEeeecCCccc-----C--C---------CCceEEEECCCcCCcccccC
Confidence 899999986533221111 2222 23568888998763210 0 0 01122358889999986553
Q ss_pred HHHHhhCCeEEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCe
Q 014316 180 ELAQNWGIKATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPA 259 (427)
Q Consensus 180 ~l~~~~~~~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (427)
++.++.+|||. |.+..... ..... ..+.+++++.+ .
T Consensus 342 -----~~~~i~~ipn~----~~~~~~~~-----------------------------~~~~~----~~r~~~~~~~~-~- 377 (568)
T 2vsy_A 342 -----YSEHVLRLQGA----FQPSDTSR-----------------------------VVAEP----PSRTQCGLPEQ-G- 377 (568)
T ss_dssp -----CSSEEEECSSC----SCCCCTTC-----------------------------CCCCC----CCTGGGTCCTT-S-
T ss_pred -----CcceeEcCCCc----CCCCCCCC-----------------------------CCCCC----CCccccCCCCC-C-
Confidence 55668999994 22211000 00000 02223344433 3
Q ss_pred EEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEe-CCCChHHHHHHHHHc
Q 014316 260 LVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITG-KGPDKESYEEKIRRL 338 (427)
Q Consensus 260 ~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G-~G~~~~~~~~~~~~l 338 (427)
+++++|++.+ ||++.+++|++.+.++ .|+++|+|+| +|+..+.+++.++++
T Consensus 378 ~v~~~g~~~~-K~~~~li~a~~~l~~~---------------------------~~~~~l~i~G~~g~~~~~l~~~~~~~ 429 (568)
T 2vsy_A 378 VVLCCFNNSY-KLNPQSMARMLAVLRE---------------------------VPDSVLWLLSGPGEADARLRAFAHAQ 429 (568)
T ss_dssp CEEEECCCGG-GCCHHHHHHHHHHHHH---------------------------CTTCEEEEECCSTTHHHHHHHHHHHT
T ss_pred EEEEeCCccc-cCCHHHHHHHHHHHHh---------------------------CCCcEEEEecCCHHHHHHHHHHHHHc
Confidence 4669999999 9999999999999876 7899999999 999999999999999
Q ss_pred CCC--cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEE-------eccC-------ccccc
Q 014316 339 RLK--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA-------VSYS-------CIEEL 402 (427)
Q Consensus 339 ~l~--~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIa-------s~~~-------g~~e~ 402 (427)
|++ +|.|+|. ++.+++.++|+.||++|+| |.. ++|++++|||+||+|||+ |++| |++|+
T Consensus 430 ~l~~~~v~~~g~-~~~~~~~~~~~~adv~v~p---s~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~ 504 (568)
T 2vsy_A 430 GVDAQRLVFMPK-LPHPQYLARYRHADLFLDT---HPY-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEM 504 (568)
T ss_dssp TCCGGGEEEECC-CCHHHHHHHGGGCSEEECC---SSS-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGG
T ss_pred CCChhHEEeeCC-CCHHHHHHHHhcCCEEeeC---CCC-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhh
Confidence 984 7999998 8889999999999999997 666 999999999999999999 9999 99998
Q ss_pred eecCCcEEEeCChHHHHHHHHHhc
Q 014316 403 VKVDKNGLLFSSSSELADQLLVNA 426 (427)
Q Consensus 403 v~~~~~G~l~~~~~~la~~l~~~~ 426 (427)
+.+ |+++++++|.++.
T Consensus 505 v~~--------~~~~la~~i~~l~ 520 (568)
T 2vsy_A 505 NVA--------DDAAFVAKAVALA 520 (568)
T ss_dssp BCS--------SHHHHHHHHHHHH
T ss_pred hcC--------CHHHHHHHHHHHh
Confidence 855 8888998887653
No 21
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.90 E-value=6.9e-23 Score=205.99 Aligned_cols=281 Identities=15% Similarity=0.086 Sum_probs=186.2
Q ss_pred EeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCc-ccccCCCceE--EEEeecCCCCCCCCcchhhHHHHHHHHHHH
Q 014316 11 VLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPH-AAILEHPSIH--IHTMTQWPTIPRGLPKVLKPVLLLLKPLIQ 87 (427)
Q Consensus 11 ~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~-~~~~~~~~i~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (427)
...+.|....+...+..|.++ | +|.+.+....... ..... .++. ++ +| . . . ...+.+++.+
T Consensus 46 h~~s~G~~~~~~~L~~~L~~~-~-~v~v~~~~~~~~~~~~~~~-~~v~~~~~-~p---~--~----~---~~~l~~~l~~ 109 (374)
T 2xci_A 46 HTASIGEFNTFLPILKELKRE-H-RILLTYFSPRAREYLKTKS-DFYDCLHP-LP---L--D----N---PFSVKRFEEL 109 (374)
T ss_dssp ECSSHHHHHHHHHHHHHHHHH-S-CEEEEESCGGGHHHHHTTG-GGCSEEEE-CC---C--S----S---HHHHHHHHHH
T ss_pred EcCCHHHHHHHHHHHHHHHhc-C-CEEEEEcCCcHHHHHHHhc-ccccceeE-CC---C--C----C---HHHHHHHHHH
Confidence 444455544455667777776 7 8877765432211 11111 3554 44 44 1 1 1 1223333433
Q ss_pred HHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccC
Q 014316 88 FFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMA 167 (427)
Q Consensus 88 ~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~a 167 (427)
.+||++|++....++.. +....+ |+++..+... ... +.+++++.+
T Consensus 110 ------------~~pDiv~~~~~~~~~~~-----~~~~~~-p~~~~~~~~~---------~~~--------~~~~~~~~~ 154 (374)
T 2xci_A 110 ------------SKPKALIVVEREFWPSL-----IIFTKV-PKILVNAYAK---------GSL--------IEKILSKKF 154 (374)
T ss_dssp ------------HCCSEEEEESCCCCHHH-----HHHCCS-CEEEEEECCC---------CCH--------HHHHHHTTC
T ss_pred ------------hCCCEEEEECccCcHHH-----HHHHhC-CEEEEEeecC---------chH--------HHHHHHHhC
Confidence 78999998753333322 222333 8665433321 111 445667889
Q ss_pred CEEEEcCHHHHHHHHHhhCC-eEEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcc
Q 014316 168 NGCLCVTQAMQHELAQNWGI-KATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSL 246 (427)
Q Consensus 168 d~vi~vS~~~~~~l~~~~~~-~~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (427)
|.++++|+.+++.+.+. |. ++.+++|+. |.+.... .
T Consensus 155 d~ii~~S~~~~~~l~~~-g~~ki~vi~n~~---f~~~~~~---------------------------------~------ 191 (374)
T 2xci_A 155 DLIIMRTQEDVEKFKTF-GAKRVFSCGNLK---FICQKGK---------------------------------G------ 191 (374)
T ss_dssp SEEEESCHHHHHHHHTT-TCCSEEECCCGG---GCCCCCS---------------------------------C------
T ss_pred CEEEECCHHHHHHHHHc-CCCeEEEcCCCc---cCCCcCh---------------------------------h------
Confidence 99999999999998764 65 488888862 2111100 0
Q ss_pred cccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCC
Q 014316 247 AGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP 326 (427)
Q Consensus 247 ~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~ 326 (427)
. .+ ..+ ++++.|+. .||++.|++|++.+.++ .|+++|+|+|+|+
T Consensus 192 --~--~l--~~~-vi~~~~~~--~k~~~~ll~A~~~l~~~---------------------------~p~~~lvivG~g~ 235 (374)
T 2xci_A 192 --I--KL--KGE-FIVAGSIH--TGEVEIILKAFKEIKKT---------------------------YSSLKLILVPRHI 235 (374)
T ss_dssp --C--CC--SSC-EEEEEEEC--GGGHHHHHHHHHHHHTT---------------------------CTTCEEEEEESSG
T ss_pred --h--hh--cCC-EEEEEeCC--CchHHHHHHHHHHHHhh---------------------------CCCcEEEEECCCH
Confidence 0 01 113 56666653 58999999999998765 7899999999999
Q ss_pred Ch-HHHHHHHHHcCCC---------cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe-c
Q 014316 327 DK-ESYEEKIRRLRLK---------RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-S 395 (427)
Q Consensus 327 ~~-~~~~~~~~~l~l~---------~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas-~ 395 (427)
.+ ++++++++++|++ +|.|.|. .+|+..+|+.||++++| +|..|++|++++||||||+|||++ +
T Consensus 236 ~~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~---~~dl~~~y~~aDv~vl~--ss~~e~gg~~~lEAmA~G~PVI~~~~ 310 (374)
T 2xci_A 236 ENAKIFEKKARDFGFKTSFFENLEGDVILVDR---FGILKELYPVGKIAIVG--GTFVNIGGHNLLEPTCWGIPVIYGPY 310 (374)
T ss_dssp GGHHHHHHHHHHTTCCEEETTCCCSSEEECCS---SSCHHHHGGGEEEEEEC--SSSSSSCCCCCHHHHTTTCCEEECSC
T ss_pred HHHHHHHHHHHHCCCceEEecCCCCcEEEECC---HHHHHHHHHhCCEEEEC--CcccCCCCcCHHHHHHhCCCEEECCC
Confidence 77 5899999999875 4788776 79999999999999886 233467889999999999999976 6
Q ss_pred cCccccceecC-CcEEEe--CChHHHHHHHHHhc
Q 014316 396 YSCIEELVKVD-KNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 396 ~~g~~e~v~~~-~~G~l~--~~~~~la~~l~~~~ 426 (427)
+++.+|++++. .+|+++ +|+++||++|.++.
T Consensus 311 ~~~~~e~~~~~~~~G~l~~~~d~~~La~ai~~ll 344 (374)
T 2xci_A 311 THKVNDLKEFLEKEGAGFEVKNETELVTKLTELL 344 (374)
T ss_dssp CTTSHHHHHHHHHTTCEEECCSHHHHHHHHHHHH
T ss_pred ccChHHHHHHHHHCCCEEEeCCHHHHHHHHHHHH
Confidence 89999988652 345544 89999999998763
No 22
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.90 E-value=3e-23 Score=188.60 Aligned_cols=133 Identities=20% Similarity=0.261 Sum_probs=122.9
Q ss_pred EEEEEeecC-CCCCHHHHHHHHHhhH--HHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCC--ChHHHHHH
Q 014316 260 LVVSSTSWT-PDEDFGILLEAALMYD--RRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEK 334 (427)
Q Consensus 260 ~i~~~g~~~-~~K~~~~Li~a~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~--~~~~~~~~ 334 (427)
+|+|+|++. +.||++.+++|++.+. ++ .|+++|+|+|+|+ ..+.++++
T Consensus 38 ~i~~~G~~~~~~K~~~~li~a~~~l~~~~~---------------------------~~~~~l~i~G~~~~~~~~~l~~~ 90 (200)
T 2bfw_A 38 TFMFIGRFDRGQKGVDVLLKAIEILSSKKE---------------------------FQEMRFIIIGKGDPELEGWARSL 90 (200)
T ss_dssp EEEEESCBCSSSSCHHHHHHHHHHHTTSGG---------------------------GGGEEEEEECCBCHHHHHHHHHH
T ss_pred EEEEeeccccccCCHHHHHHHHHHHHhhcc---------------------------CCCeEEEEECCCChHHHHHHHHH
Confidence 899999999 9999999999999986 44 5789999999998 78889999
Q ss_pred HHHcCCCcEEE-ecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCcEEEeC
Q 014316 335 IRRLRLKRVAF-RTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKNGLLFS 413 (427)
Q Consensus 335 ~~~l~l~~V~f-~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~G~l~~ 413 (427)
+++++ +|+| +|. ++.+++..+|+.||++++| |..|++|++++|||+||+|||+++.++..|++ ++.+|++++
T Consensus 91 ~~~~~--~v~~~~g~-~~~~~~~~~~~~ad~~l~p---s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~~-~~~~g~~~~ 163 (200)
T 2bfw_A 91 EEKHG--NVKVITEM-LSREFVRELYGSVDFVIIP---SYFEPFGLVALEAMCLGAIPIASAVGGLRDII-TNETGILVK 163 (200)
T ss_dssp HHHCT--TEEEECSC-CCHHHHHHHHTTCSEEEEC---CSCCSSCHHHHHHHHTTCEEEEESCHHHHHHC-CTTTCEEEC
T ss_pred HHhcC--CEEEEecc-CCHHHHHHHHHHCCEEEEC---CCCCCccHHHHHHHHCCCCEEEeCCCChHHHc-CCCceEEec
Confidence 99987 9999 997 9999999999999999997 77799999999999999999999999999999 999999994
Q ss_pred --ChHHHHHHHHHhc
Q 014316 414 --SSSELADQLLVNA 426 (427)
Q Consensus 414 --~~~~la~~l~~~~ 426 (427)
|+++++++|.++.
T Consensus 164 ~~~~~~l~~~i~~l~ 178 (200)
T 2bfw_A 164 AGDPGELANAILKAL 178 (200)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 8899999998763
No 23
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.90 E-value=5.8e-23 Score=204.71 Aligned_cols=237 Identities=15% Similarity=0.052 Sum_probs=161.0
Q ss_pred hCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 99 IASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 99 ~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
..+||+||+|++. ...+.+.++++..++|+++..++. .+ ......+ .....++++.+.+|.++++|+..+
T Consensus 89 ~~~pDvv~~~~~~--~~~~~~~~~a~~~~ip~v~~~~~~-~~-----~~~~~~~--~~~~~~~~~~~~~~~~~~~s~~~~ 158 (376)
T 1v4v_A 89 EMGADYVLVHGDT--LTTFAVAWAAFLEGIPVGHVEAGL-RS-----GNLKEPF--PEEANRRLTDVLTDLDFAPTPLAK 158 (376)
T ss_dssp HTTCSEEEEESSC--HHHHHHHHHHHHTTCCEEEETCCC-CC-----SCTTSST--THHHHHHHHHHHCSEEEESSHHHH
T ss_pred HcCCCEEEEeCCh--HHHHHHHHHHHHhCCCEEEEeCCC-cc-----ccccCCC--chHHHHHHHHHHhceeeCCCHHHH
Confidence 3799999999743 222334567788899986544433 11 0000111 012334556678999999999999
Q ss_pred HHHHHhhCCe---EEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCC
Q 014316 179 HELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP 255 (427)
Q Consensus 179 ~~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (427)
+.+.+. |.+ +.+++|+-.+.+... ... . ..+.++ .
T Consensus 159 ~~l~~~-g~~~~ki~vi~n~~~d~~~~~----~~~------------------------------~----~~~~~~---~ 196 (376)
T 1v4v_A 159 ANLLKE-GKREEGILVTGQTGVDAVLLA----AKL------------------------------G----RLPEGL---P 196 (376)
T ss_dssp HHHHTT-TCCGGGEEECCCHHHHHHHHH----HHH------------------------------C----CCCTTC---C
T ss_pred HHHHHc-CCCcceEEEECCchHHHHhhh----hhh------------------------------h----HHHHhc---C
Confidence 988764 553 778887511111000 000 0 011111 1
Q ss_pred CCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEE-eCCC-ChHHHHH
Q 014316 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGP-DKESYEE 333 (427)
Q Consensus 256 ~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~-G~G~-~~~~~~~ 333 (427)
+++.+++++||+...||++.+++|++.+.++ .|+++++++ |+|+ ..+.+++
T Consensus 197 ~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~---------------------------~~~~~lv~~~g~~~~~~~~l~~ 249 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWPLLSDLAQALKRVAEA---------------------------FPHLTFVYPVHLNPVVREAVFP 249 (376)
T ss_dssp SSCEEEECCCCGGGGGGHHHHHHHHHHHHHH---------------------------CTTSEEEEECCSCHHHHHHHHH
T ss_pred CCCEEEEEeCcccchHHHHHHHHHHHHHHhh---------------------------CCCeEEEEECCCCHHHHHHHHH
Confidence 3455778899998888999999999999876 678888886 7665 3455555
Q ss_pred HHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe-ccCccccceecCCcEEEe
Q 014316 334 KIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SYSCIEELVKVDKNGLLF 412 (427)
Q Consensus 334 ~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas-~~~g~~e~v~~~~~G~l~ 412 (427)
+++. .++|.|+|. ++..++.++|+.||++|+| | + + .++||||||+|||++ ++++..+++++ .+|+++
T Consensus 250 ~~~~--~~~v~~~g~-~g~~~~~~~~~~ad~~v~~---S--~--g-~~lEA~a~G~PvI~~~~~~~~~~~~~~-g~g~lv 317 (376)
T 1v4v_A 250 VLKG--VRNFVLLDP-LEYGSMAALMRASLLLVTD---S--G--G-LQEEGAALGVPVVVLRNVTERPEGLKA-GILKLA 317 (376)
T ss_dssp HHTT--CTTEEEECC-CCHHHHHHHHHTEEEEEES---C--H--H-HHHHHHHTTCCEEECSSSCSCHHHHHH-TSEEEC
T ss_pred Hhcc--CCCEEEECC-CCHHHHHHHHHhCcEEEEC---C--c--C-HHHHHHHcCCCEEeccCCCcchhhhcC-CceEEC
Confidence 5432 358999986 7777999999999999986 4 2 2 388999999999988 47899998754 489999
Q ss_pred -CChHHHHHHHHHhc
Q 014316 413 -SSSSELADQLLVNA 426 (427)
Q Consensus 413 -~~~~~la~~l~~~~ 426 (427)
.|+++|+++|.++.
T Consensus 318 ~~d~~~la~~i~~ll 332 (376)
T 1v4v_A 318 GTDPEGVYRVVKGLL 332 (376)
T ss_dssp CSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 78999999998763
No 24
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=99.89 E-value=8.3e-22 Score=207.90 Aligned_cols=280 Identities=14% Similarity=0.054 Sum_probs=175.4
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHH-hhcCCcEEEEecccchhhh-h--------hhcCCCch----H---HHHHHHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWAS-SLRRSAFIVDWHNFGYTLL-S--------LSLGRRSH----F---VSIYRWIEKY 162 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~-~~~~~p~i~~~h~~~~~~~-~--------~~~~~~~~----~---~~~~~~~e~~ 162 (427)
.+|||+|+|. +.+..++.+++ +..++|.|+|+|+..+--. . ..+..... . ..-...+|+.
T Consensus 180 ~~pdIiH~HD---W~tg~~~~~Lk~~~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~~~i~~~~~~EKa 256 (725)
T 3nb0_A 180 QHAIVAHFHE---WLAGVALPLCRKRRIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGRFGIYHRYCIERA 256 (725)
T ss_dssp SEEEEEEEES---GGGCTHHHHHHHTTCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCcEEEeCc---hhhhHHHHHHHHhCCCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhhhchhHHHHHHHH
Confidence 4599999999 55555455555 3568999999999832100 0 00000000 0 0012456888
Q ss_pred HhccCCEEEEcCHHHHHHHHHhhCCe-EEEecCC-CCCCcCCCChH--HHHHHHhhhhhcccCCCCccccccCCCCCCCc
Q 014316 163 YGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-PPEFFHPTSLE--EKHELFCRLNKILHQPLGVQDCVSNGMEGQKA 238 (427)
Q Consensus 163 ~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~-~~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (427)
....||.|+|||+.++++++..++.+ -.+|+|| |.+.|.|.... .+.+...++...
T Consensus 257 ga~~AD~ITTVS~~yA~Ei~~Ll~r~~d~iIpNGID~~~f~p~~~~~~~k~~aK~klq~~-------------------- 316 (725)
T 3nb0_A 257 AAHSADVFTTVSQITAFEAEHLLKRKPDGILPNGLNVIKFQAFHEFQNLHALKKEKINDF-------------------- 316 (725)
T ss_dssp HHHHSSEEEESSHHHHHHHHHHTSSCCSEECCCCBCCCCCSSTTHHHHHHHHHHHHHHHH--------------------
T ss_pred HHHhCCEEEECCHHHHHHHHHHhcCCCCEEEcCCccccccCcchhhHHHHHHHHHHHHHH--------------------
Confidence 88899999999999999998876665 2349999 98888875321 111111111100
Q ss_pred cchhhhcccccccccCCCCCeEEEEEeecC-CCCCHHHHHHHHHhhHHHHhhhhccC----------CCchhh-------
Q 014316 239 DETIFTSLAGIDVFLKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNED----------DSTNEE------- 300 (427)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~-~~K~~~~Li~a~~~l~~~~~~~~~~~----------~~~~~~------- 300 (427)
.+......+.++.++..++..+||++ +.||++.+++|+..+.+...... .+ +-++..
T Consensus 317 ----l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~-~~~~vvafii~p~~~~~~~~~~l~~ 391 (725)
T 3nb0_A 317 ----VRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSG-SKKTVVAFIVMPAKNNSFTVEALKG 391 (725)
T ss_dssp ----HHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTT-CCCEEEEEEECCCCEEEECHHHHHH
T ss_pred ----HHhhcccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhcc-CCCcEEEEEEeCCCCCCCchhhhcc
Confidence 00000011123334555677789999 78999999999999987632210 00 000000
Q ss_pred ------------------------hhh--------hhhc-C------------------Ccc-c--CCCCE-EEEEEeCC
Q 014316 301 ------------------------VFL--------KEIS-D------------------GKQ-Y--LYPRL-LFIITGKG 325 (427)
Q Consensus 301 ------------------------~~~--------~~~~-~------------------~~~-~--~~~~~-~l~i~G~G 325 (427)
..+ ..+| + +.+ . ..|.+ .-.+.-
T Consensus 392 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~-- 469 (725)
T 3nb0_A 392 QAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVD-- 469 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETT--
T ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeeccc--
Confidence 000 0011 0 000 0 11111 111111
Q ss_pred CChHHHHHHHHHcCCC-c------EEEecCCCCcc------cHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEE
Q 014316 326 PDKESYEEKIRRLRLK-R------VAFRTMWLSAE------DYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC 392 (427)
Q Consensus 326 ~~~~~~~~~~~~l~l~-~------V~f~g~~~~~~------~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVI 392 (427)
...+.+...++++++. + |.|.+.|++.+ ++.++|++||++|+| |.+|+||++++||||||+|||
T Consensus 470 ~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~P---S~~EgfGl~~LEAmA~G~PvI 546 (725)
T 3nb0_A 470 DANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFP---SYYEPWGYTPAECTVMGVPSI 546 (725)
T ss_dssp GGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECC---CSSBSSCHHHHHHHHTTCCEE
T ss_pred CCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEec---cccCCCCHHHHHHHHcCCCEE
Confidence 1234566777888873 2 89998889887 589999999999998 889999999999999999999
Q ss_pred EeccCccccceecC-------CcEEEe
Q 014316 393 AVSYSCIEELVKVD-------KNGLLF 412 (427)
Q Consensus 393 as~~~g~~e~v~~~-------~~G~l~ 412 (427)
+|+.||+.|+|.++ .+|+++
T Consensus 547 ~s~~gG~~d~V~dg~~~~~~~~tG~lV 573 (725)
T 3nb0_A 547 TTNVSGFGSYMEDLIETNQAKDYGIYI 573 (725)
T ss_dssp EETTBHHHHHHHTTSCHHHHHHTTEEE
T ss_pred EeCCCChhhhhhccccccCCCCceEEE
Confidence 99999999999875 369888
No 25
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.89 E-value=8.1e-23 Score=180.38 Aligned_cols=135 Identities=14% Similarity=0.282 Sum_probs=121.1
Q ss_pred CeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHHHH
Q 014316 258 PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRR 337 (427)
Q Consensus 258 ~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~~~ 337 (427)
+++|+|+|++.+.||++.+++|++.+++ .|+++|+|+|+|+..+.+++++++
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~----------------------------~~~~~l~i~G~g~~~~~~~~~~~~ 53 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSKY----------------------------KQDIVLLLKGKGPDEKKIKLLAQK 53 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCTT----------------------------GGGEEEEEECCSTTHHHHHHHHHH
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhcc----------------------------CCCeEEEEEeCCccHHHHHHHHHH
Confidence 4689999999999999999999999853 478999999999999999999999
Q ss_pred cCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCC-cEEE-eccCccccceecCCcEEEeCCh
Q 014316 338 LRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGL-PVCA-VSYSCIEELVKVDKNGLLFSSS 415 (427)
Q Consensus 338 l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~-PVIa-s~~~g~~e~v~~~~~G~l~~~~ 415 (427)
+++ +|.| |. ++.+++.++|+.||++|+| |..|++|++++||||||+ |||+ ++.|+..|++.++.+.+..+|+
T Consensus 54 ~~~-~v~~-g~-~~~~~~~~~~~~adv~v~p---s~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~~~~~~~~ 127 (166)
T 3qhp_A 54 LGV-KAEF-GF-VNSNELLEILKTCTLYVHA---ANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERSLFEPNNA 127 (166)
T ss_dssp HTC-EEEC-CC-CCHHHHHHHHTTCSEEEEC---CCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGGEECTTCH
T ss_pred cCC-eEEE-ee-cCHHHHHHHHHhCCEEEEC---CcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCCceEEcCCCH
Confidence 988 8999 86 9999999999999999997 778999999999999997 9999 4589999999887773333789
Q ss_pred HHHHHHHHHhc
Q 014316 416 SELADQLLVNA 426 (427)
Q Consensus 416 ~~la~~l~~~~ 426 (427)
++++++|.++.
T Consensus 128 ~~l~~~i~~l~ 138 (166)
T 3qhp_A 128 KDLSAKIDWWL 138 (166)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998763
No 26
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=99.89 E-value=2.7e-22 Score=199.24 Aligned_cols=221 Identities=13% Similarity=0.061 Sum_probs=160.2
Q ss_pred hhCCCcEEEEcCCCChhHHHHHHHHHhh--cCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCH
Q 014316 98 KIASPDVFLVQNPPSVPTLVAVKWASSL--RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQ 175 (427)
Q Consensus 98 ~~~~~Dvv~~~~p~~~~~~~~~~~~~~~--~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~ 175 (427)
...++|+|++++|+.....+.+.++.++ +++|+|+.+||+ ++.... ... ...+.|+++++.||.|+++|+
T Consensus 71 ~~~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k~i~~ihDl-~pl~~~----~~~---~~~~~E~~~y~~aD~Ii~~S~ 142 (339)
T 3rhz_A 71 GLRHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIKIVLFIHDV-VPLMFS----GNF---YLMDRTIAYYNKADVVVAPSQ 142 (339)
T ss_dssp TCCTTCEEEEEECCSSCHHHHHHHHHHHTTSSCEEEEEESCC-HHHHCG----GGG---GGHHHHHHHHTTCSEEEESCH
T ss_pred cCCCCCEEEEeCCCcchhhHHHHHHHHHHhcCCEEEEEeccc-HHhhCc----cch---hhHHHHHHHHHHCCEEEECCH
Confidence 4578999999998754433334455553 399999999999 544321 111 223479999999999999999
Q ss_pred HHHHHHHHhhCCe---EEEecCCCCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccc
Q 014316 176 AMQHELAQNWGIK---ATVLYDQPPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVF 252 (427)
Q Consensus 176 ~~~~~l~~~~~~~---~~vi~n~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (427)
.+++.+.+. |.+ +.++++.+.. .+.+ ..
T Consensus 143 ~~~~~l~~~-G~~~~ki~~~~~~~~~--~~~~----------------------------------------------~~ 173 (339)
T 3rhz_A 143 KMIDKLRDF-GMNVSKTVVQGMWDHP--TQAP----------------------------------------------MF 173 (339)
T ss_dssp HHHHHHHHT-TCCCSEEEECCSCCCC--CCCC----------------------------------------------CC
T ss_pred HHHHHHHHc-CCCcCceeecCCCCcc--Cccc----------------------------------------------cc
Confidence 999999774 554 3333332210 0000 00
Q ss_pred cCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHH
Q 014316 253 LKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 332 (427)
Q Consensus 253 ~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~ 332 (427)
.+.....|+|+|++..... +..+ .++++|.|+|+|+.+
T Consensus 174 -~~~~~~~i~yaG~l~k~~~-------L~~l------------------------------~~~~~f~ivG~G~~~---- 211 (339)
T 3rhz_A 174 -PAGLKREIHFPGNPERFSF-------VKEW------------------------------KYDIPLKVYTWQNVE---- 211 (339)
T ss_dssp -CCEEEEEEEECSCTTTCGG-------GGGC------------------------------CCSSCEEEEESCCCC----
T ss_pred -ccCCCcEEEEeCCcchhhH-------HHhC------------------------------CCCCeEEEEeCCccc----
Confidence 1112358999999984221 1111 257999999999875
Q ss_pred HHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCC-----CCCCchHHHHHHcCCCcEEEeccCccccceecCC
Q 014316 333 EKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-----GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDK 407 (427)
Q Consensus 333 ~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~-----~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~ 407 (427)
+ +.||+|+|. ++.++++.+++++|++++. .+.. ...+|.|++||||||+|||+++.++..++++++.
T Consensus 212 ----~--l~nV~f~G~-~~~~el~~~l~~~~~~lv~-~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~~~v~~~~ 283 (339)
T 3rhz_A 212 ----L--PQNVHKINY-RPDEQLLMEMSQGGFGLVW-MDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQELIENNG 283 (339)
T ss_dssp ----C--CTTEEEEEC-CCHHHHHHHHHTEEEEECC-CCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTTHHHHHHT
T ss_pred ----C--cCCEEEeCC-CCHHHHHHHHHhCCEEEEE-CCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHHHHHHhCC
Confidence 2 349999997 9999999999999999874 1111 1467999999999999999999999999999999
Q ss_pred cEEEeCChHHHHHHHHHh
Q 014316 408 NGLLFSSSSELADQLLVN 425 (427)
Q Consensus 408 ~G~l~~~~~~la~~l~~~ 425 (427)
+|+++++.++++++|..+
T Consensus 284 ~G~~~~~~~e~~~~i~~l 301 (339)
T 3rhz_A 284 LGWIVKDVEEAIMKVKNV 301 (339)
T ss_dssp CEEEESSHHHHHHHHHHC
T ss_pred eEEEeCCHHHHHHHHHHh
Confidence 999999999999988765
No 27
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.88 E-value=1.7e-22 Score=181.29 Aligned_cols=139 Identities=20% Similarity=0.198 Sum_probs=125.8
Q ss_pred ccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHH
Q 014316 252 FLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 331 (427)
Q Consensus 252 ~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~ 331 (427)
.++.+++ +|+|+|++.+.||++.+++|++.+ ++++|+|+|+|+..+.+
T Consensus 18 ~~~~~~~-~i~~~G~~~~~Kg~~~li~a~~~l-------------------------------~~~~l~i~G~~~~~~~l 65 (177)
T 2f9f_A 18 KFKCYGD-FWLSVNRIYPEKRIELQLEVFKKL-------------------------------QDEKLYIVGWFSKGDHA 65 (177)
T ss_dssp CCCCCCS-CEEEECCSSGGGTHHHHHHHHHHC-------------------------------TTSCEEEEBCCCTTSTH
T ss_pred ccCCCCC-EEEEEeccccccCHHHHHHHHHhC-------------------------------CCcEEEEEecCccHHHH
Confidence 4455554 899999999999999999999874 47899999999988899
Q ss_pred HHHHH--HcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCccccceecCCc
Q 014316 332 EEKIR--RLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVDKN 408 (427)
Q Consensus 332 ~~~~~--~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~~~~~ 408 (427)
+++++ ++++. +|.|+|. ++.+++..+|+.||++++| |..|++|++++||||||+|||+++.++..|++.++.+
T Consensus 66 ~~~~~~~~~~l~~~v~~~g~-~~~~e~~~~~~~adi~v~p---s~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~ 141 (177)
T 2f9f_A 66 ERYARKIMKIAPDNVKFLGS-VSEEELIDLYSRCKGLLCT---AKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKT 141 (177)
T ss_dssp HHHHHHHHHHSCTTEEEEES-CCHHHHHHHHHHCSEEEEC---CSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTT
T ss_pred HHHHHhhhcccCCcEEEeCC-CCHHHHHHHHHhCCEEEeC---CCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCc
Confidence 99999 77885 8999997 9999999999999999997 6689999999999999999999999999999999999
Q ss_pred EEEe-CChHHHHHHHHHhc
Q 014316 409 GLLF-SSSSELADQLLVNA 426 (427)
Q Consensus 409 G~l~-~~~~~la~~l~~~~ 426 (427)
|+++ +|.++++++|.++.
T Consensus 142 g~~~~~d~~~l~~~i~~l~ 160 (177)
T 2f9f_A 142 GYLVNADVNEIIDAMKKVS 160 (177)
T ss_dssp EEEECSCHHHHHHHHHHHH
T ss_pred cEEeCCCHHHHHHHHHHHH
Confidence 9998 78899999998764
No 28
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.87 E-value=3e-21 Score=200.30 Aligned_cols=244 Identities=9% Similarity=0.061 Sum_probs=161.7
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhh-cCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~-~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
..+|+||+|++ ....+..++... .++|+++++|.. ++.... . +.-+. .+.+-+.+ -.+|.+...+....
T Consensus 122 ~~~DiV~vHdy---hl~~l~~~lr~~~~~~~i~~~~H~p-fp~~~~-~-~~lp~---~~~il~~l-l~~d~i~f~~~~~~ 191 (482)
T 1uqt_A 122 QDDDIIWIHDY---HLLPFAHELRKRGVNNRIGFFLHIP-FPTPEI-F-NALPT---YDTLLEQL-CDYDLLGFQTENDR 191 (482)
T ss_dssp CTTCEEEEESG---GGTTHHHHHHHTTCCSCEEEECCSC-CCCHHH-H-TTSTT---HHHHHHHH-TTSSEEEESSHHHH
T ss_pred CCCCEEEEECc---hHHHHHHHHHHhCCCCcEEEEEcCC-CCCHHH-H-hhCcc---HHHHHHhh-hccCeEEEECHHHH
Confidence 46799999983 333334455443 489999999976 321100 0 00011 01111111 24677777776655
Q ss_pred HHHHH-----------------hhCC--eEEEecCC-CCCCcCCCC----hHHHHHHHhhhhhcccCCCCccccccCCCC
Q 014316 179 HELAQ-----------------NWGI--KATVLYDQ-PPEFFHPTS----LEEKHELFCRLNKILHQPLGVQDCVSNGME 234 (427)
Q Consensus 179 ~~l~~-----------------~~~~--~~~vi~n~-~~~~f~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (427)
+.+.. .++. ++.++||| |.+.|.+.. .....++..
T Consensus 192 ~~f~~~~~~~l~~~~~~~~~~~~~g~~~~v~vip~GID~~~f~~~~~~~~~~~~~~lr~--------------------- 250 (482)
T 1uqt_A 192 LAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKA--------------------- 250 (482)
T ss_dssp HHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHH---------------------
T ss_pred HHHHHHHHHHhCCccccCCeEEECCeEEEEEEEeccCCHHHHHHHhcCcchHHHHHHHH---------------------
Confidence 55432 1122 37889999 766654310 000112111
Q ss_pred CCCccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCC
Q 014316 235 GQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLY 314 (427)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (427)
++. + ..+|+++||+.+.||++.+++|++.+.++ +
T Consensus 251 ---------------~~~---~-~~vil~VgRl~~~Kgi~~ll~A~~~ll~~---------------------------~ 284 (482)
T 1uqt_A 251 ---------------ELK---N-VQNIFSVERLDYSKGLPERFLAYEALLEK---------------------------Y 284 (482)
T ss_dssp ---------------HTT---T-CEEEEEECCBCGGGCHHHHHHHHHHHHHH---------------------------C
T ss_pred ---------------HhC---C-CEEEEEEeCCcccCCHHHHHHHHHHHHHh---------------------------C
Confidence 111 2 34899999999999999999999999876 4
Q ss_pred C----CEEEEEEeCC-----CC----hHHHHHHHHHcC-------CCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCC
Q 014316 315 P----RLLFIITGKG-----PD----KESYEEKIRRLR-------LKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSG 374 (427)
Q Consensus 315 ~----~~~l~i~G~G-----~~----~~~~~~~~~~l~-------l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~ 374 (427)
| +++|+++|.+ +. ++++++++.+++ ...|.|++..++.+++.++|+.||++|+| |..
T Consensus 285 p~~~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~p---S~~ 361 (482)
T 1uqt_A 285 PQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVT---PLR 361 (482)
T ss_dssp GGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEEC---CSS
T ss_pred ccccCcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEEC---CCc
Confidence 4 4789999953 22 233445554432 22477654449999999999999999997 889
Q ss_pred CCCchHHHHHHcCCC-----cEEEeccCccccceecCCcEEEe--CChHHHHHHHHHhc
Q 014316 375 LDLPMKVVDMFGCGL-----PVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLVNA 426 (427)
Q Consensus 375 e~~p~~~lEama~G~-----PVIas~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~~ 426 (427)
||||++++||||||+ |+|+|+.+|..+.+. +|+++ .|++++|++|.++.
T Consensus 362 EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l~---~g~lv~p~d~~~lA~ai~~lL 417 (482)
T 1uqt_A 362 DGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIVNPYDRDEVAAALDRAL 417 (482)
T ss_dssp BSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCT---TSEEECTTCHHHHHHHHHHHH
T ss_pred ccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHhC---CeEEECCCCHHHHHHHHHHHH
Confidence 999999999999997 999999888888772 78999 47899999998753
No 29
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.80 E-value=7.2e-19 Score=178.06 Aligned_cols=238 Identities=15% Similarity=0.108 Sum_probs=156.6
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchH-HHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHF-VSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
.+||+|+++... ...+.+.++++..++|+++..++. .+ .....++ .... .+.+.+.+|.+++.|+..+
T Consensus 110 ~kPDvVi~~g~~--~~~~~~~~aa~~~~IPv~h~~ag~-rs-----~~~~~~~~~~~~---r~~~~~~a~~~~~~se~~~ 178 (396)
T 3dzc_A 110 EQPDVVLVHGDT--ATTFAASLAAYYQQIPVGHVEAGL-RT-----GNIYSPWPEEGN---RKLTAALTQYHFAPTDTSR 178 (396)
T ss_dssp HCCSEEEEETTS--HHHHHHHHHHHTTTCCEEEETCCC-CC-----SCTTSSTTHHHH---HHHHHHTCSEEEESSHHHH
T ss_pred cCCCEEEEECCc--hhHHHHHHHHHHhCCCEEEEECCc-cc-----cccccCCcHHHH---HHHHHHhcCEEECCCHHHH
Confidence 799999999732 333435678888999976433322 10 0111111 1121 2234678999999999999
Q ss_pred HHHHHhhCCe---EEEecCC--CCCCcCCCCh----HHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccc
Q 014316 179 HELAQNWGIK---ATVLYDQ--PPEFFHPTSL----EEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGI 249 (427)
Q Consensus 179 ~~l~~~~~~~---~~vi~n~--~~~~f~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (427)
+.+.+. |.+ +.++.|. |...+.+... ..+.+ +++
T Consensus 179 ~~l~~~-G~~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~------------------------------------~r~ 221 (396)
T 3dzc_A 179 ANLLQE-NYNAENIFVTGNTVIDALLAVREKIHTDMDLQAT------------------------------------LES 221 (396)
T ss_dssp HHHHHT-TCCGGGEEECCCHHHHHHHHHHHHHHHCHHHHHH------------------------------------HHH
T ss_pred HHHHHc-CCCcCcEEEECCcHHHHHHHhhhhcccchhhHHH------------------------------------HHH
Confidence 998764 654 7777775 2111100000 00011 122
Q ss_pred ccc-cCCCCCeEEEEEeecC-CCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEE-eCCC
Q 014316 250 DVF-LKPNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGP 326 (427)
Q Consensus 250 ~~~-~~~~~~~~i~~~g~~~-~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~-G~G~ 326 (427)
+++ ++++++.++++.+|.. ..|+++.+++|++.+.++ +|++++++. |.++
T Consensus 222 ~lg~l~~~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~---------------------------~~~~~~v~~~g~~~ 274 (396)
T 3dzc_A 222 QFPMLDASKKLILVTGHRRESFGGGFERICQALITTAEQ---------------------------HPECQILYPVHLNP 274 (396)
T ss_dssp TCTTCCTTSEEEEEECSCBCCCTTHHHHHHHHHHHHHHH---------------------------CTTEEEEEECCBCH
T ss_pred HhCccCCCCCEEEEEECCcccchhHHHHHHHHHHHHHHh---------------------------CCCceEEEEeCCCh
Confidence 234 2345555566666644 347899999999999876 788998885 6553
Q ss_pred ChHHHHHHHHH-cCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe-ccCccccce
Q 014316 327 DKESYEEKIRR-LRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SYSCIEELV 403 (427)
Q Consensus 327 ~~~~~~~~~~~-l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas-~~~g~~e~v 403 (427)
.+++.+++ ++. ++|.|.+. +..+++..+|+.||++|.+ | + ....|||++|+|||++ +.++..|++
T Consensus 275 ---~~~~~l~~~~~~~~~v~~~~~-lg~~~~~~l~~~ad~vv~~---S-G----g~~~EA~a~G~PvV~~~~~~~~~e~v 342 (396)
T 3dzc_A 275 ---NVREPVNKLLKGVSNIVLIEP-QQYLPFVYLMDRAHIILTD---S-G----GIQEEAPSLGKPVLVMRETTERPEAV 342 (396)
T ss_dssp ---HHHHHHHHHTTTCTTEEEECC-CCHHHHHHHHHHCSEEEES---C-S----GGGTTGGGGTCCEEECCSSCSCHHHH
T ss_pred ---HHHHHHHHHHcCCCCEEEeCC-CCHHHHHHHHHhcCEEEEC---C-c----cHHHHHHHcCCCEEEccCCCcchHHH
Confidence 34444444 233 58999997 7778999999999999875 4 2 2348999999999999 688888988
Q ss_pred ecCCcEEEeC-ChHHHHHHHHHh
Q 014316 404 KVDKNGLLFS-SSSELADQLLVN 425 (427)
Q Consensus 404 ~~~~~G~l~~-~~~~la~~l~~~ 425 (427)
++| .+++++ |+++|++++.++
T Consensus 343 ~~G-~~~lv~~d~~~l~~ai~~l 364 (396)
T 3dzc_A 343 AAG-TVKLVGTNQQQICDALSLL 364 (396)
T ss_dssp HHT-SEEECTTCHHHHHHHHHHH
T ss_pred HcC-ceEEcCCCHHHHHHHHHHH
Confidence 777 568884 689999998765
No 30
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.79 E-value=1.9e-18 Score=178.55 Aligned_cols=243 Identities=11% Similarity=-0.030 Sum_probs=163.9
Q ss_pred CCcEEEEcCCCChhHHHHHHHHHh-hcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 101 SPDVFLVQNPPSVPTLVAVKWASS-LRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 101 ~~Dvv~~~~p~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
..|+|.+|++ ...++..++.. ..+.++.+.+|-. |+.... + ..-+ ..+.+.+-+.+ -.+|.|.+-|....+
T Consensus 149 ~~D~VwVhDY---hL~llp~~lR~~~~~~~igfFlHiP-fPs~e~-f-~~Lp-~~~r~ell~gl-l~~DligF~t~~y~~ 220 (496)
T 3t5t_A 149 ADPVYLVHDY---QLVGVPALLREQRPDAPILLFVHIP-WPSADY-W-RILP-KEIRTGILHGM-LPATTIGFFADRWCR 220 (496)
T ss_dssp SSCEEEEESG---GGTTHHHHHHHHCTTSCEEEECCSC-CCCHHH-H-TTSC-HHHHHHHHHHH-TTSSEEEESSHHHHH
T ss_pred CCCEEEEeCc---cHhHHHHHHHhhCCCCeEEEEEcCC-CCCHHH-H-hhCc-HhHHHHHHHHH-HhCCEEEEecHHHHH
Confidence 5789999993 33333444443 4578899988866 311100 0 0001 00112222223 259999999998887
Q ss_pred HHHH----hh-C--------------C--eEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCC
Q 014316 180 ELAQ----NW-G--------------I--KATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQK 237 (427)
Q Consensus 180 ~l~~----~~-~--------------~--~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (427)
.+.+ .. + . ++.++|+| |.+.|.+...+.+.++
T Consensus 221 ~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~l-------------------------- 274 (496)
T 3t5t_A 221 NFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGI-------------------------- 274 (496)
T ss_dssp HHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTH--------------------------
T ss_pred HHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHH--------------------------
Confidence 6543 12 2 1 26788999 8888865431111111
Q ss_pred ccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCC-
Q 014316 238 ADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPR- 316 (427)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 316 (427)
+++++ + ..+|+++||+.+.||+..+++|+ .+.++ +|+
T Consensus 275 ----------r~~~~---~-~~lIl~VgRLd~~KGi~~lL~Af-~ll~~---------------------------~P~~ 312 (496)
T 3t5t_A 275 ----------EEWAD---G-HRLVVHSGRTDPIKNAERAVRAF-VLAAR---------------------------GGGL 312 (496)
T ss_dssp ----------HHHHT---T-SEEEEEEEESSGGGCHHHHHHHH-HHHHH---------------------------TSSC
T ss_pred ----------HHHhC---C-ceEEEEcccCccccCHHHHHHHH-HHHHh---------------------------Cccc
Confidence 11111 2 35899999999999999999999 87766 554
Q ss_pred --EEEEEEeC-----CCChHH----HHHHHHHcCC----CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHH
Q 014316 317 --LLFIITGK-----GPDKES----YEEKIRRLRL----KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKV 381 (427)
Q Consensus 317 --~~l~i~G~-----G~~~~~----~~~~~~~l~l----~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~ 381 (427)
+.|+++|. |+..++ +++++.+++. ..|.|+|. ++.+++.++|+.||++|+| |.+||||+++
T Consensus 313 ~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~-v~~~el~aly~~ADv~vv~---SlrEGfgLv~ 388 (496)
T 3t5t_A 313 EKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDND-NDVNHTIACFRRADLLIFN---STVDGQNLST 388 (496)
T ss_dssp TTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEC-CCHHHHHHHHHHCSEEEEC---CSSBSCCSHH
T ss_pred ceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeCC-CCHHHHHHHHHhccEEEEC---cccccCChhH
Confidence 67888863 333333 4444444432 26999998 8999999999999999997 8899999999
Q ss_pred HHHHcCC---CcEEEeccCccccceecCCcEEEe--CChHHHHHHHHHh
Q 014316 382 VDMFGCG---LPVCAVSYSCIEELVKVDKNGLLF--SSSSELADQLLVN 425 (427)
Q Consensus 382 lEama~G---~PVIas~~~g~~e~v~~~~~G~l~--~~~~~la~~l~~~ 425 (427)
+|||||| .|+|.|..+|..+.+ +.+|+++ .|++++|++|.++
T Consensus 389 ~EamA~~~~~g~lVlSe~aGa~~~l--~~~allVnP~D~~~lA~AI~~a 435 (496)
T 3t5t_A 389 FEAPLVNERDADVILSETCGAAEVL--GEYCRSVNPFDLVEQAEAISAA 435 (496)
T ss_dssp HHHHHHCSSCCEEEEETTBTTHHHH--GGGSEEECTTBHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCEEEeCCCCCHHHh--CCCEEEECCCCHHHHHHHHHHH
Confidence 9999997 899999988888888 3579999 5789999998764
No 31
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.77 E-value=9.1e-18 Score=170.38 Aligned_cols=234 Identities=17% Similarity=0.101 Sum_probs=154.9
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchH-HHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHF-VSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
.+||+|+++... ...+.+.++++..++|++....+. .+ .....++ . ....+++.+.+|.+++.|+..+
T Consensus 113 ~kPD~Vi~~gd~--~~~l~~~laA~~~~IPv~h~~agl-rs-----~~~~~~~p~---~~~r~~~~~~a~~~~~~se~~~ 181 (403)
T 3ot5_A 113 ENPDIVLVHGDT--TTSFAAGLATFYQQKMLGHVEAGL-RT-----WNKYSPFPE---EMNRQLTGVMADIHFSPTKQAK 181 (403)
T ss_dssp HCCSEEEEETTC--HHHHHHHHHHHHTTCEEEEESCCC-CC-----SCTTSSTTH---HHHHHHHHHHCSEEEESSHHHH
T ss_pred cCCCEEEEECCc--hhHHHHHHHHHHhCCCEEEEECCc-cc-----cccccCCcH---HHHHHHHHHhcCEEECCCHHHH
Confidence 799999999732 223335677888899975432222 10 0111111 1 1223345667999999999999
Q ss_pred HHHHHhhCCe---EEEecCC--CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhccccccccc
Q 014316 179 HELAQNWGIK---ATVLYDQ--PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFL 253 (427)
Q Consensus 179 ~~l~~~~~~~---~~vi~n~--~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (427)
+.+.+. |.+ +.++.|. |...+.+... . +.. .+++ +
T Consensus 182 ~~l~~~-Gi~~~~i~vvGn~~~D~~~~~~~~~-~-------------------------------~~~-----~~~~--l 221 (403)
T 3ot5_A 182 ENLLAE-GKDPATIFVTGNTAIDALKTTVQKD-Y-------------------------------HHP-----ILEN--L 221 (403)
T ss_dssp HHHHHT-TCCGGGEEECCCHHHHHHHHHSCTT-C-------------------------------CCH-----HHHS--C
T ss_pred HHHHHc-CCCcccEEEeCCchHHHHHhhhhhh-c-------------------------------chH-----HHHh--c
Confidence 998774 554 7777764 2111111000 0 000 0111 1
Q ss_pred CCCCCeEEEEEeecCC-CCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEE-eCCCChHHH
Q 014316 254 KPNRPALVVSSTSWTP-DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIIT-GKGPDKESY 331 (427)
Q Consensus 254 ~~~~~~~i~~~g~~~~-~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~-G~G~~~~~~ 331 (427)
++++.++++.+|... .|+++.+++|+..+.++ +|++++++. |.++ .+
T Consensus 222 -~~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~---------------------------~~~~~~v~~~~~~~---~~ 270 (403)
T 3ot5_A 222 -GDNRLILMTAHRRENLGEPMQGMFEAVREIVES---------------------------REDTELVYPMHLNP---AV 270 (403)
T ss_dssp -TTCEEEEECCCCHHHHTTHHHHHHHHHHHHHHH---------------------------CTTEEEEEECCSCH---HH
T ss_pred -cCCCEEEEEeCcccccCcHHHHHHHHHHHHHHh---------------------------CCCceEEEecCCCH---HH
Confidence 344556677777543 46789999999999876 789998887 4443 34
Q ss_pred HHHHHH-cCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe-ccCccccceecCCc
Q 014316 332 EEKIRR-LRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-SYSCIEELVKVDKN 408 (427)
Q Consensus 332 ~~~~~~-l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas-~~~g~~e~v~~~~~ 408 (427)
++.+++ ++. ++|.+++. ++.+++..+|+.||++|.+ | |...+|||++|+|+|++ +.++..|.++.| +
T Consensus 271 ~~~l~~~~~~~~~v~l~~~-l~~~~~~~l~~~ad~vv~~---S-----Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~g-~ 340 (403)
T 3ot5_A 271 REKAMAILGGHERIHLIEP-LDAIDFHNFLRKSYLVFTD---S-----GGVQEEAPGMGVPVLVLRDTTERPEGIEAG-T 340 (403)
T ss_dssp HHHHHHHHTTCTTEEEECC-CCHHHHHHHHHHEEEEEEC---C-----HHHHHHGGGTTCCEEECCSSCSCHHHHHHT-S
T ss_pred HHHHHHHhCCCCCEEEeCC-CCHHHHHHHHHhcCEEEEC---C-----ccHHHHHHHhCCCEEEecCCCcchhheeCC-c
Confidence 444444 343 58999998 8888999999999998864 3 33458999999999999 688888888655 8
Q ss_pred EEEeC-ChHHHHHHHHHh
Q 014316 409 GLLFS-SSSELADQLLVN 425 (427)
Q Consensus 409 G~l~~-~~~~la~~l~~~ 425 (427)
|++++ |.+++++++.++
T Consensus 341 ~~lv~~d~~~l~~ai~~l 358 (403)
T 3ot5_A 341 LKLIGTNKENLIKEALDL 358 (403)
T ss_dssp EEECCSCHHHHHHHHHHH
T ss_pred EEEcCCCHHHHHHHHHHH
Confidence 99995 889999998765
No 32
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.76 E-value=6e-18 Score=170.23 Aligned_cols=314 Identities=13% Similarity=0.040 Sum_probs=178.6
Q ss_pred cceEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeec-------------CCC---C
Q 014316 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQ-------------WPT---I 67 (427)
Q Consensus 4 ~~~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~-------------~~~---~ 67 (427)
+++++++..+..|...++...+.+|.++ ||+|++++... ..+.....|++++.++. ... +
T Consensus 20 ~MrIl~~~~~~~Gh~~~~~~la~~L~~~-GheV~v~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (412)
T 3otg_A 20 HMRVLFASLGTHGHTYPLLPLATAARAA-GHEVTFATGEG---FAGTLRKLGFEPVATGMPVFDGFLAALRIRFDTDSPE 95 (412)
T ss_dssp SCEEEEECCSSHHHHGGGHHHHHHHHHT-TCEEEEEECGG---GHHHHHHTTCEEEECCCCHHHHHHHHHHHHHSCSCCT
T ss_pred eeEEEEEcCCCcccHHHHHHHHHHHHHC-CCEEEEEccHH---HHHHHHhcCCceeecCcccccchhhhhhhhhcccCCc
Confidence 4566665544333333456778888886 99999999753 23344456899998872 000 0
Q ss_pred CCCCcc-hhhHHHHHHHH-HHHHHHHHHHHHhhhCCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhh
Q 014316 68 PRGLPK-VLKPVLLLLKP-LIQFFMLLWFLCVKIASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLS 145 (427)
Q Consensus 68 ~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~ 145 (427)
...... .......+... ....+.-+..++ +..+||+|+++.. . +.+.++++..++|+|++.|+...
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~~pDvVv~~~~-~----~~~~~aa~~~giP~v~~~~~~~~------ 163 (412)
T 3otg_A 96 GLTPEQLSELPQIVFGRVIPQRVFDELQPVI-ERLRPDLVVQEIS-N----YGAGLAALKAGIPTICHGVGRDT------ 163 (412)
T ss_dssp TCCHHHHTTSHHHHHHTHHHHHHHHHHHHHH-HHHCCSEEEEETT-C----HHHHHHHHHHTCCEEEECCSCCC------
T ss_pred cCChhHhhHHHHHHHhccchHHHHHHHHHHH-HhcCCCEEEECch-h----hHHHHHHHHcCCCEEEecccccC------
Confidence 000000 00000011111 000001111112 2369999999851 1 11456777889999998888632
Q ss_pred cCCCchHHHHHHHHHHHHh------------ccCCEEEEcCHHHHHHHHHhhCCe-EEEecCCCCCCcCCCChHHHHHHH
Q 014316 146 LGRRSHFVSIYRWIEKYYG------------KMANGCLCVTQAMQHELAQNWGIK-ATVLYDQPPEFFHPTSLEEKHELF 212 (427)
Q Consensus 146 ~~~~~~~~~~~~~~e~~~~------------~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~~~~~f~~~~~~~~~~~~ 212 (427)
.......+.+++.++.. ..+|.+++.+....+...+.+... ..+.+.+ ...
T Consensus 164 --~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~------- 227 (412)
T 3otg_A 164 --PDDLTRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFRARPRRHELRPVP-------FAE------- 227 (412)
T ss_dssp --CSHHHHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHHTCTTEEECCCCC-------CCC-------
T ss_pred --chhhhHHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCcccCCCCcceeeccC-------CCC-------
Confidence 11111222233333322 356778888766555444332211 1111111 000
Q ss_pred hhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhc
Q 014316 213 CRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILN 292 (427)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~ 292 (427)
......|. ....++++.++++.|++. .++.+.+.++++.+.+
T Consensus 228 ------------------------~~~~~~~~------~~~~~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~------- 269 (412)
T 3otg_A 228 ------------------------QGDLPAWL------SSRDTARPLVYLTLGTSS-GGTVEVLRAAIDGLAG------- 269 (412)
T ss_dssp ------------------------CCCCCGGG------GGSCTTSCEEEEECTTTT-CSCHHHHHHHHHHHHT-------
T ss_pred ------------------------CCCCCCcc------ccccCCCCEEEEEcCCCC-cCcHHHHHHHHHHHHc-------
Confidence 00000000 011345567888899986 7787777777777653
Q ss_pred cCCCchhhhhhhhhcCCcccCCCCEEEEEEe-CCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccC
Q 014316 293 EDDSTNEEVFLKEISDGKQYLYPRLLFIITG-KGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTS 371 (427)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G-~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~ 371 (427)
. ++++++++ +++..+.+++ + -++|.|.|. + ++.++|+.||++|+.
T Consensus 270 ---------------------~-~~~~~~~~g~~~~~~~l~~----~-~~~v~~~~~-~---~~~~~l~~ad~~v~~--- 315 (412)
T 3otg_A 270 ---------------------L-DADVLVASGPSLDVSGLGE----V-PANVRLESW-V---PQAALLPHVDLVVHH--- 315 (412)
T ss_dssp ---------------------S-SSEEEEECCSSCCCTTCCC----C-CTTEEEESC-C---CHHHHGGGCSEEEES---
T ss_pred ---------------------C-CCEEEEEECCCCChhhhcc----C-CCcEEEeCC-C---CHHHHHhcCcEEEEC---
Confidence 2 45555555 4443443331 1 158999997 4 589999999999973
Q ss_pred CCCCCCchHHHHHHcCCCcEEEeccC----ccccceecCCcEEEeC----ChHHHHHHHHHh
Q 014316 372 SSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELVKVDKNGLLFS----SSSELADQLLVN 425 (427)
Q Consensus 372 s~~e~~p~~~lEama~G~PVIas~~~----g~~e~v~~~~~G~l~~----~~~~la~~l~~~ 425 (427)
+ -+++++|||++|+|+|++..+ +..+.+.+...|+++. ++++|+++|.++
T Consensus 316 ~----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~l 373 (412)
T 3otg_A 316 G----GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRL 373 (412)
T ss_dssp C----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHH
T ss_pred C----chHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHH
Confidence 2 247999999999999997655 3678888889999993 779999998875
No 33
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.76 E-value=5.2e-17 Score=162.52 Aligned_cols=287 Identities=19% Similarity=0.163 Sum_probs=167.4
Q ss_pred HHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhhCCC
Q 014316 23 YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASP 102 (427)
Q Consensus 23 ~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (427)
..|.+|.++ ||+|+++|....- ..+.....|++++.++....+...+....+....+.+.+++...+ .+..+|
T Consensus 21 ala~~L~~~-g~~V~~vg~~~g~-e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----l~~~~P 93 (365)
T 3s2u_A 21 ACAREFQAR-GYAVHWLGTPRGI-ENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLKSLFQALRV-----IRQLRP 93 (365)
T ss_dssp HHHHHHHHT-TCEEEEEECSSST-HHHHTGGGTCCEEECC--------------CHHHHHHHHHHHHHH-----HHHHCC
T ss_pred HHHHHHHhC-CCEEEEEECCchH-hhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHH-----HHhcCC
Confidence 345556564 9999999854432 234445568888888732111111111222222223333332222 234899
Q ss_pred cEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHHHHH
Q 014316 103 DVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHELA 182 (427)
Q Consensus 103 Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~ 182 (427)
|+|+++.. ..++. +.+++++.++|++++..|... + ...+++.+.++.+.+......
T Consensus 94 DvVi~~g~--~~s~p-~~laA~~~~iP~vihe~n~~~-------G----------~~nr~l~~~a~~v~~~~~~~~---- 149 (365)
T 3s2u_A 94 VCVLGLGG--YVTGP-GGLAARLNGVPLVIHEQNAVA-------G----------TANRSLAPIARRVCEAFPDTF---- 149 (365)
T ss_dssp SEEEECSS--STHHH-HHHHHHHTTCCEEEEECSSSC-------C----------HHHHHHGGGCSEEEESSTTSS----
T ss_pred CEEEEcCC--cchHH-HHHHHHHcCCCEEEEecchhh-------h----------hHHHhhccccceeeecccccc----
Confidence 99999862 33333 567788899999976665521 1 123456678888876543221
Q ss_pred HhhCCeEEEecCC-CCCCcCCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCeEE
Q 014316 183 QNWGIKATVLYDQ-PPEFFHPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALV 261 (427)
Q Consensus 183 ~~~~~~~~vi~n~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 261 (427)
....+..+..|. ..+.+... +......++++.++
T Consensus 150 -~~~~k~~~~g~pvr~~~~~~~--------------------------------------------~~~~~~~~~~~~il 184 (365)
T 3s2u_A 150 -PASDKRLTTGNPVRGELFLDA--------------------------------------------HARAPLTGRRVNLL 184 (365)
T ss_dssp -CC---CEECCCCCCGGGCCCT--------------------------------------------TSSCCCTTSCCEEE
T ss_pred -cCcCcEEEECCCCchhhccch--------------------------------------------hhhcccCCCCcEEE
Confidence 001123333343 11111110 11123455566677
Q ss_pred EEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEE-EEEEeCCCChHHHHHHHHHcCC
Q 014316 262 VSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLL-FIITGKGPDKESYEEKIRRLRL 340 (427)
Q Consensus 262 ~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~i~G~G~~~~~~~~~~~~l~l 340 (427)
++.|+....+..+.+.++++.+... .++. +.++|.+ +.+...+..++++.
T Consensus 185 v~gGs~g~~~~~~~~~~al~~l~~~----------------------------~~~~vi~~~G~~-~~~~~~~~~~~~~~ 235 (365)
T 3s2u_A 185 VLGGSLGAEPLNKLLPEALAQVPLE----------------------------IRPAIRHQAGRQ-HAEITAERYRTVAV 235 (365)
T ss_dssp ECCTTTTCSHHHHHHHHHHHTSCTT----------------------------TCCEEEEECCTT-THHHHHHHHHHTTC
T ss_pred EECCcCCccccchhhHHHHHhcccc----------------------------cceEEEEecCcc-ccccccceeccccc
Confidence 8888988887778888888877532 2344 4455554 34556666666653
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcc--------ccceecCCcEEEe
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI--------EELVKVDKNGLLF 412 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~--------~e~v~~~~~G~l~ 412 (427)
++.+.++ .+++.++|+.||++|+ ..+ ++++.|+|++|+|+|....+.. .+.+.+...|+++
T Consensus 236 -~~~v~~f---~~dm~~~l~~aDlvI~----raG---~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l 304 (365)
T 3s2u_A 236 -EADVAPF---ISDMAAAYAWADLVIC----RAG---ALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLL 304 (365)
T ss_dssp -CCEEESC---CSCHHHHHHHCSEEEE----CCC---HHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEEC
T ss_pred -ccccccc---hhhhhhhhccceEEEe----cCC---cchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEe
Confidence 5777898 7899999999999996 222 5789999999999998875532 2356666778888
Q ss_pred C----ChHHHHHHHHHh
Q 014316 413 S----SSSELADQLLVN 425 (427)
Q Consensus 413 ~----~~~~la~~l~~~ 425 (427)
. ++++|+++|.++
T Consensus 305 ~~~~~~~~~L~~~i~~l 321 (365)
T 3s2u_A 305 PQKSTGAAELAAQLSEV 321 (365)
T ss_dssp CTTTCCHHHHHHHHHHH
T ss_pred ecCCCCHHHHHHHHHHH
Confidence 3 468899988775
No 34
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.70 E-value=2.2e-15 Score=152.79 Aligned_cols=125 Identities=14% Similarity=0.116 Sum_probs=86.6
Q ss_pred CCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEE-EEEeCCCChHHHHHH
Q 014316 256 NRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IITGKGPDKESYEEK 334 (427)
Q Consensus 256 ~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~i~G~G~~~~~~~~~ 334 (427)
+++.++++.|++. .++.+.+.+++..+.+ .+++++ +++|+|++.+.++
T Consensus 231 ~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~----------------------------~~~~~~~~~~G~~~~~~~l~-- 279 (430)
T 2iyf_A 231 AEKVVLVSLGSAF-TKQPAFYRECVRAFGN----------------------------LPGWHLVLQIGRKVTPAELG-- 279 (430)
T ss_dssp CSEEEEEECTTTC-C-CHHHHHHHHHHHTT----------------------------CTTEEEEEECC---CGGGGC--
T ss_pred CCCeEEEEcCCCC-CCcHHHHHHHHHHHhc----------------------------CCCeEEEEEeCCCCChHHhc--
Confidence 4456888999998 5555554444444421 246777 5789887655442
Q ss_pred HHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceecCCcEE
Q 014316 335 IRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKNGL 410 (427)
Q Consensus 335 ~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~~~~G~ 410 (427)
++ -++|.|.|. ++. . ++|+.||++|.. + -+++++|||++|+|+|++..++ ..+.+.+...|+
T Consensus 280 --~~-~~~v~~~~~-~~~--~-~~l~~ad~~v~~---~----G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~ 345 (430)
T 2iyf_A 280 --EL-PDNVEVHDW-VPQ--L-AILRQADLFVTH---A----GAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVAR 345 (430)
T ss_dssp --SC-CTTEEEESS-CCH--H-HHHTTCSEEEEC---C----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEE
T ss_pred --cC-CCCeEEEec-CCH--H-HHhhccCEEEEC---C----CccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEE
Confidence 12 158999996 654 3 789999998862 1 1368999999999999998765 466677788999
Q ss_pred EeC----ChHHHHHHHHHh
Q 014316 411 LFS----SSSELADQLLVN 425 (427)
Q Consensus 411 l~~----~~~~la~~l~~~ 425 (427)
++. +.++|+++|.++
T Consensus 346 ~~~~~~~~~~~l~~~i~~l 364 (430)
T 2iyf_A 346 KLATEEATADLLRETALAL 364 (430)
T ss_dssp ECCCC-CCHHHHHHHHHHH
T ss_pred EcCCCCCCHHHHHHHHHHH
Confidence 984 679999998775
No 35
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.65 E-value=6.3e-16 Score=155.29 Aligned_cols=123 Identities=11% Similarity=0.069 Sum_probs=79.1
Q ss_pred CCCCeEEEEEeecCCCC----------CHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeC
Q 014316 255 PNRPALVVSSTSWTPDE----------DFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGK 324 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~K----------~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~ 324 (427)
++++.++++.|++...+ .+..++++++.+ +++++++|+
T Consensus 225 ~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~--------------------------------~~~~v~~~~ 272 (398)
T 4fzr_A 225 RKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL--------------------------------GFEVVVAVS 272 (398)
T ss_dssp CSSCEEECC----------------CCSHHHHHHHGGGG--------------------------------TCEEEECCC
T ss_pred CCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC--------------------------------CCEEEEEeC
Confidence 45566888889996544 455556555442 478888888
Q ss_pred CCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec----cCccc
Q 014316 325 GPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS----YSCIE 400 (427)
Q Consensus 325 G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~----~~g~~ 400 (427)
|+..+.++ .+ .++|.+.|+ + ++.+++..||++|.. +-+.++.|||++|+|+|+.. ..+..
T Consensus 273 ~~~~~~l~----~~-~~~v~~~~~-~---~~~~ll~~ad~~v~~-------gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a 336 (398)
T 4fzr_A 273 DKLAQTLQ----PL-PEGVLAAGQ-F---PLSAIMPACDVVVHH-------GGHGTTLTCLSEGVPQVSVPVIAEVWDSA 336 (398)
T ss_dssp C------------C-CTTEEEESC-C---CHHHHGGGCSEEEEC-------CCHHHHHHHHHTTCCEEECCCSGGGHHHH
T ss_pred Ccchhhhc----cC-CCcEEEeCc-C---CHHHHHhhCCEEEec-------CCHHHHHHHHHhCCCEEecCCchhHHHHH
Confidence 76544333 22 258999996 5 478899999999952 23578999999999999954 44677
Q ss_pred cceecCCcEEEeC----ChHHHHHHHHHh
Q 014316 401 ELVKVDKNGLLFS----SSSELADQLLVN 425 (427)
Q Consensus 401 e~v~~~~~G~l~~----~~~~la~~l~~~ 425 (427)
+.+.+...|+++. +.++|+++|.++
T Consensus 337 ~~~~~~g~g~~~~~~~~~~~~l~~ai~~l 365 (398)
T 4fzr_A 337 RLLHAAGAGVEVPWEQAGVESVLAACARI 365 (398)
T ss_dssp HHHHHTTSEEECC-------CHHHHHHHH
T ss_pred HHHHHcCCEEecCcccCCHHHHHHHHHHH
Confidence 8888999999984 678899888765
No 36
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.64 E-value=1.5e-14 Score=144.61 Aligned_cols=123 Identities=18% Similarity=0.145 Sum_probs=84.5
Q ss_pred CCCCeEEEEEeecCCCC--CHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEE-EEEeCCCChHHH
Q 014316 255 PNRPALVVSSTSWTPDE--DFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLF-IITGKGPDKESY 331 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~K--~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~i~G~G~~~~~~ 331 (427)
++++.++++.|+....+ .+..++++++. .+ +++ +++|++.+.+.+
T Consensus 229 ~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~-------------------------------~~-~~~~~~~g~~~~~~~~ 276 (402)
T 3ia7_A 229 PDAPVLLVSLGNQFNEHPEFFRACAQAFAD-------------------------------TP-WHVVMAIGGFLDPAVL 276 (402)
T ss_dssp TTCCEEEEECCSCSSCCHHHHHHHHHHHTT-------------------------------SS-CEEEEECCTTSCGGGG
T ss_pred CCCCEEEEECCCCCcchHHHHHHHHHHHhc-------------------------------CC-cEEEEEeCCcCChhhh
Confidence 45567888889987665 23333333322 33 444 557777655443
Q ss_pred HHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEecc-----CccccceecC
Q 014316 332 EEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY-----SCIEELVKVD 406 (427)
Q Consensus 332 ~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~-----~g~~e~v~~~ 406 (427)
++ + -++|.+.++ ++. . +++..||++|.. .+ ..+++|||++|+|+|.... .+..+.+.+.
T Consensus 277 ~~----~-~~~v~~~~~-~~~--~-~ll~~ad~~v~~----~G---~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~ 340 (402)
T 3ia7_A 277 GP----L-PPNVEAHQW-IPF--H-SVLAHARACLTH----GT---TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIEL 340 (402)
T ss_dssp CS----C-CTTEEEESC-CCH--H-HHHTTEEEEEEC----CC---HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHT
T ss_pred CC----C-CCcEEEecC-CCH--H-HHHhhCCEEEEC----CC---HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHc
Confidence 32 1 258999997 544 3 999999999862 11 2588999999999995544 4677788888
Q ss_pred CcEEEeC----ChHHHHHHHHHh
Q 014316 407 KNGLLFS----SSSELADQLLVN 425 (427)
Q Consensus 407 ~~G~l~~----~~~~la~~l~~~ 425 (427)
..|.++. ++++|++++.++
T Consensus 341 g~g~~~~~~~~~~~~l~~~~~~l 363 (402)
T 3ia7_A 341 GLGSVLRPDQLEPASIREAVERL 363 (402)
T ss_dssp TSEEECCGGGCSHHHHHHHHHHH
T ss_pred CCEEEccCCCCCHHHHHHHHHHH
Confidence 9999883 678999988765
No 37
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.61 E-value=1.2e-15 Score=152.61 Aligned_cols=127 Identities=11% Similarity=0.126 Sum_probs=93.5
Q ss_pred CCCCeEEEEEeecCCCCCH-HHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHH
Q 014316 255 PNRPALVVSSTSWTPDEDF-GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~K~~-~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~ 333 (427)
++++.++++.|+....++. ..+++++... ++ .|+++++++|+|+..+.++
T Consensus 216 ~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~---------------------------~p~~~~v~~~~~~~~~~l~- 266 (391)
T 3tsa_A 216 TSARRVCICMGRMVLNATGPAPLLRAVAAA-TE---------------------------LPGVEAVIAVPPEHRALLT- 266 (391)
T ss_dssp CSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HT---------------------------STTEEEEEECCGGGGGGCT-
T ss_pred CCCCEEEEEcCCCCCcccchHHHHHHHHHh-cc---------------------------CCCeEEEEEECCcchhhcc-
Confidence 4456677888998765444 6677777666 54 6789999999886544332
Q ss_pred HHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec----cCccccceecCCc
Q 014316 334 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS----YSCIEELVKVDKN 408 (427)
Q Consensus 334 ~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~----~~g~~e~v~~~~~ 408 (427)
++ ++|.+.|+ ++. .+++..||++|.. +-+.+++|||++|+|+|+.. ..+..+.+.+...
T Consensus 267 -----~~~~~v~~~~~-~~~---~~ll~~ad~~v~~-------~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~ 330 (391)
T 3tsa_A 267 -----DLPDNARIAES-VPL---NLFLRTCELVICA-------GGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGA 330 (391)
T ss_dssp -----TCCTTEEECCS-CCG---GGTGGGCSEEEEC-------CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTS
T ss_pred -----cCCCCEEEecc-CCH---HHHHhhCCEEEeC-------CCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCC
Confidence 23 58999986 665 4456999999962 23468999999999999954 4556777888899
Q ss_pred EEEeCC------hHHHHHHHHHhc
Q 014316 409 GLLFSS------SSELADQLLVNA 426 (427)
Q Consensus 409 G~l~~~------~~~la~~l~~~~ 426 (427)
|+++.. +++|++++.++.
T Consensus 331 g~~~~~~~~~~~~~~l~~ai~~ll 354 (391)
T 3tsa_A 331 GICLPDEQAQSDHEQFTDSIATVL 354 (391)
T ss_dssp EEECCSHHHHTCHHHHHHHHHHHH
T ss_pred EEecCcccccCCHHHHHHHHHHHH
Confidence 999954 789999987753
No 38
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.57 E-value=9.5e-15 Score=146.78 Aligned_cols=119 Identities=16% Similarity=0.101 Sum_probs=85.7
Q ss_pred CCCCeEEEEEeecCCC-CCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHH
Q 014316 255 PNRPALVVSSTSWTPD-EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~~-K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~ 333 (427)
++++.++++.|++... ++.+.+.++++.+.+ . +++++++|++++.+.++
T Consensus 230 ~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~----------------------------~-~~~~v~~~g~~~~~~l~- 279 (398)
T 3oti_A 230 PARPEVAITMGTIELQAFGIGAVEPIIAAAGE----------------------------V-DADFVLALGDLDISPLG- 279 (398)
T ss_dssp CSSCEEEECCTTTHHHHHCGGGHHHHHHHHHT----------------------------S-SSEEEEECTTSCCGGGC-
T ss_pred CCCCEEEEEcCCCccccCcHHHHHHHHHHHHc----------------------------C-CCEEEEEECCcChhhhc-
Confidence 4556788888998554 344455555554432 2 57888888887654433
Q ss_pred HHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEE----eccCccc--cceecC
Q 014316 334 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA----VSYSCIE--ELVKVD 406 (427)
Q Consensus 334 ~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIa----s~~~g~~--e~v~~~ 406 (427)
++ +||.+.|+ + ++.+++..||++|.. +-+.++.|||++|+|+|+ .+..+.. +.+.+.
T Consensus 280 -----~~~~~v~~~~~-~---~~~~ll~~ad~~v~~-------~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~ 343 (398)
T 3oti_A 280 -----TLPRNVRAVGW-T---PLHTLLRTCTAVVHH-------GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRR 343 (398)
T ss_dssp -----SCCTTEEEESS-C---CHHHHHTTCSEEEEC-------CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHH
T ss_pred -----cCCCcEEEEcc-C---CHHHHHhhCCEEEEC-------CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHC
Confidence 23 58999997 4 578899999999962 234689999999999999 4557777 889899
Q ss_pred CcEEEeC----ChHHHH
Q 014316 407 KNGLLFS----SSSELA 419 (427)
Q Consensus 407 ~~G~l~~----~~~~la 419 (427)
..|++++ +.++++
T Consensus 344 g~g~~~~~~~~~~~~l~ 360 (398)
T 3oti_A 344 GIGLVSTSDKVDADLLR 360 (398)
T ss_dssp TSEEECCGGGCCHHHHH
T ss_pred CCEEeeCCCCCCHHHHH
Confidence 9999983 356666
No 39
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.56 E-value=2.9e-13 Score=136.34 Aligned_cols=92 Identities=15% Similarity=0.145 Sum_probs=67.3
Q ss_pred EEEEE-EeCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe
Q 014316 317 LLFII-TGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 394 (427)
Q Consensus 317 ~~l~i-~G~G~~~~~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas 394 (427)
+++++ +|++++.+.++ .+ ++|.+.++ ++.. +++..||++|.. .+ ..++.|||++|+|+|+.
T Consensus 277 ~~~v~~~g~~~~~~~l~------~~~~~v~~~~~-~~~~---~ll~~ad~~v~~----~G---~~t~~Ea~~~G~P~v~~ 339 (415)
T 3rsc_A 277 WHVVMTLGGQVDPAALG------DLPPNVEAHRW-VPHV---KVLEQATVCVTH----GG---MGTLMEALYWGRPLVVV 339 (415)
T ss_dssp CEEEEECTTTSCGGGGC------CCCTTEEEESC-CCHH---HHHHHEEEEEES----CC---HHHHHHHHHTTCCEEEC
T ss_pred cEEEEEeCCCCChHHhc------CCCCcEEEEec-CCHH---HHHhhCCEEEEC----Cc---HHHHHHHHHhCCCEEEe
Confidence 66655 77776554443 23 58999986 5543 889999999962 11 25899999999999995
Q ss_pred c----cCccccceecCCcEEEeC----ChHHHHHHHHHh
Q 014316 395 S----YSCIEELVKVDKNGLLFS----SSSELADQLLVN 425 (427)
Q Consensus 395 ~----~~g~~e~v~~~~~G~l~~----~~~~la~~l~~~ 425 (427)
. .....+.+.+...|..+. ++++|++++.++
T Consensus 340 p~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~~~i~~l 378 (415)
T 3rsc_A 340 PQSFDVQPMARRVDQLGLGAVLPGEKADGDTLLAAVGAV 378 (415)
T ss_dssp CCSGGGHHHHHHHHHHTCEEECCGGGCCHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHcCCEEEcccCCCCHHHHHHHHHHH
Confidence 4 444667777888898883 678999998765
No 40
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.48 E-value=6.4e-13 Score=132.51 Aligned_cols=121 Identities=13% Similarity=0.111 Sum_probs=86.9
Q ss_pred CCCeEEEEEeecCCC-------CCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh
Q 014316 256 NRPALVVSSTSWTPD-------EDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK 328 (427)
Q Consensus 256 ~~~~~i~~~g~~~~~-------K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~ 328 (427)
+++.++++.|++... +.+..++++++.+ ++++++++++++.
T Consensus 209 ~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~--------------------------------~~~~~~~~g~~~~ 256 (384)
T 2p6p_A 209 TRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW--------------------------------DVELIVAAPDTVA 256 (384)
T ss_dssp SSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT--------------------------------TCEEEEECCHHHH
T ss_pred CCCEEEEECCCCCccccccccHHHHHHHHHHHhcC--------------------------------CcEEEEEeCCCCH
Confidence 445688899998865 5677778877642 4677776554322
Q ss_pred HHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----ccccee
Q 014316 329 ESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVK 404 (427)
Q Consensus 329 ~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~ 404 (427)
+.++ .+ -++|.+ |. ++ ..++|..||++|.. +-++++.|||++|+|+|+....+ ..+.+.
T Consensus 257 ~~l~----~~-~~~v~~-~~-~~---~~~~l~~~d~~v~~-------~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~ 319 (384)
T 2p6p_A 257 EALR----AE-VPQARV-GW-TP---LDVVAPTCDLLVHH-------AGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVA 319 (384)
T ss_dssp HHHH----HH-CTTSEE-EC-CC---HHHHGGGCSEEEEC-------SCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHH
T ss_pred HhhC----CC-CCceEE-cC-CC---HHHHHhhCCEEEeC-------CcHHHHHHHHHhCCCEEEccCcccchHHHHHHH
Confidence 2222 22 147888 75 65 46789999999962 12358999999999999998643 666677
Q ss_pred cCCcEEEeC----ChHHHHHHHHHh
Q 014316 405 VDKNGLLFS----SSSELADQLLVN 425 (427)
Q Consensus 405 ~~~~G~l~~----~~~~la~~l~~~ 425 (427)
+...|++++ +.++++++|.++
T Consensus 320 ~~g~g~~~~~~~~~~~~l~~~i~~l 344 (384)
T 2p6p_A 320 DYGAAIALLPGEDSTEAIADSCQEL 344 (384)
T ss_dssp HHTSEEECCTTCCCHHHHHHHHHHH
T ss_pred HCCCeEecCcCCCCHHHHHHHHHHH
Confidence 788899884 578999988765
No 41
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.44 E-value=1e-12 Score=132.34 Aligned_cols=233 Identities=15% Similarity=0.117 Sum_probs=148.9
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQH 179 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~ 179 (427)
.+||+|+++..... .+ +.++++..++|+++...+. .+ .....+ .. ...+.+.+.+|.+++.|+..++
T Consensus 93 ~kPD~Vlv~gd~~~--~~-aalaA~~~~IPv~h~eagl-rs-----~~~~~p-ee---~nR~~~~~~a~~~~~~te~~~~ 159 (385)
T 4hwg_A 93 EKPDAVLFYGDTNS--CL-SAIAAKRRKIPIFHMEAGN-RC-----FDQRVP-EE---INRKIIDHISDVNITLTEHARR 159 (385)
T ss_dssp HCCSEEEEESCSGG--GG-GHHHHHHTTCCEEEESCCC-CC-----SCTTST-HH---HHHHHHHHHCSEEEESSHHHHH
T ss_pred cCCcEEEEECCchH--HH-HHHHHHHhCCCEEEEeCCC-cc-----ccccCc-HH---HHHHHHHhhhceeecCCHHHHH
Confidence 79999999974322 22 2567778899965433333 11 111111 11 1223455679999999999999
Q ss_pred HHHHhhCCe---EEEecCCCCCCcCCC-ChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCC
Q 014316 180 ELAQNWGIK---ATVLYDQPPEFFHPT-SLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKP 255 (427)
Q Consensus 180 ~l~~~~~~~---~~vi~n~~~~~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (427)
++.+. |.+ +.++.|.-.+.+... +...+.+ .++++++++
T Consensus 160 ~l~~~-G~~~~~I~vtGnp~~D~~~~~~~~~~~~~------------------------------------~~~~lgl~~ 202 (385)
T 4hwg_A 160 YLIAE-GLPAELTFKSGSHMPEVLDRFMPKILKSD------------------------------------ILDKLSLTP 202 (385)
T ss_dssp HHHHT-TCCGGGEEECCCSHHHHHHHHHHHHHHCC------------------------------------HHHHTTCCT
T ss_pred HHHHc-CCCcCcEEEECCchHHHHHHhhhhcchhH------------------------------------HHHHcCCCc
Confidence 98764 554 677766411111000 0000001 222334444
Q ss_pred CCCeEEEEEeecC---CCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHH
Q 014316 256 NRPALVVSSTSWT---PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 332 (427)
Q Consensus 256 ~~~~~i~~~g~~~---~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~ 332 (427)
++.++++.+|.+ ..|++..+++|+..+.++ + ++.+++... +..+
T Consensus 203 -~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~---------------------------~-~~~vv~p~~----p~~~ 249 (385)
T 4hwg_A 203 -KQYFLISSHREENVDVKNNLKELLNSLQMLIKE---------------------------Y-NFLIIFSTH----PRTK 249 (385)
T ss_dssp -TSEEEEEECCC-----CHHHHHHHHHHHHHHHH---------------------------H-CCEEEEEEC----HHHH
T ss_pred -CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhc---------------------------C-CeEEEEECC----hHHH
Confidence 455677777643 447789999999998764 3 566666543 2456
Q ss_pred HHHHHc-C-C---CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC-ccccceecC
Q 014316 333 EKIRRL-R-L---KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS-CIEELVKVD 406 (427)
Q Consensus 333 ~~~~~l-~-l---~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~-g~~e~v~~~ 406 (427)
+.++++ + + ++|.+.+. ++..++..+++.||+++.. | |....||+++|+|+|+.... +..|.++.|
T Consensus 250 ~~l~~~~~~~~~~~~v~l~~~-lg~~~~~~l~~~adlvvt~---S-----Ggv~~EA~alG~Pvv~~~~~ter~e~v~~G 320 (385)
T 4hwg_A 250 KRLEDLEGFKELGDKIRFLPA-FSFTDYVKLQMNAFCILSD---S-----GTITEEASILNLPALNIREAHERPEGMDAG 320 (385)
T ss_dssp HHHHTSGGGGGTGGGEEECCC-CCHHHHHHHHHHCSEEEEC---C-----TTHHHHHHHTTCCEEECSSSCSCTHHHHHT
T ss_pred HHHHHHHHHhcCCCCEEEEcC-CCHHHHHHHHHhCcEEEEC---C-----ccHHHHHHHcCCCEEEcCCCccchhhhhcC
Confidence 666665 4 3 47999887 7888999999999999953 3 33679999999999998743 467777665
Q ss_pred CcEEEeC-ChHHHHHHHHHh
Q 014316 407 KNGLLFS-SSSELADQLLVN 425 (427)
Q Consensus 407 ~~G~l~~-~~~~la~~l~~~ 425 (427)
++++++ |.+++++++.++
T Consensus 321 -~~~lv~~d~~~i~~ai~~l 339 (385)
T 4hwg_A 321 -TLIMSGFKAERVLQAVKTI 339 (385)
T ss_dssp -CCEECCSSHHHHHHHHHHH
T ss_pred -ceEEcCCCHHHHHHHHHHH
Confidence 678884 889999998775
No 42
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.28 E-value=2.7e-10 Score=115.16 Aligned_cols=93 Identities=13% Similarity=0.095 Sum_probs=67.5
Q ss_pred CEEE-EEEeCCCChHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEE
Q 014316 316 RLLF-IITGKGPDKESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCA 393 (427)
Q Consensus 316 ~~~l-~i~G~G~~~~~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIa 393 (427)
++++ +++|.+.+.+.++ .+ ++|.+.+. ++.. ++|..||++|. ++ =.++++|||++|+|+|+
T Consensus 284 ~~~~~~~~g~~~~~~~~~------~~~~~v~~~~~-~~~~---~~l~~~d~~v~-----~~--G~~t~~Ea~~~G~P~i~ 346 (424)
T 2iya_A 284 DWHVVLSVGRFVDPADLG------EVPPNVEVHQW-VPQL---DILTKASAFIT-----HA--GMGSTMEALSNAVPMVA 346 (424)
T ss_dssp SSEEEEECCTTSCGGGGC------SCCTTEEEESS-CCHH---HHHTTCSEEEE-----CC--CHHHHHHHHHTTCCEEE
T ss_pred CcEEEEEECCcCChHHhc------cCCCCeEEecC-CCHH---HHHhhCCEEEE-----CC--chhHHHHHHHcCCCEEE
Confidence 4566 5678776544332 23 58999985 6653 78999999885 11 13689999999999999
Q ss_pred eccCc----cccceecCCcEEEeC----ChHHHHHHHHHh
Q 014316 394 VSYSC----IEELVKVDKNGLLFS----SSSELADQLLVN 425 (427)
Q Consensus 394 s~~~g----~~e~v~~~~~G~l~~----~~~~la~~l~~~ 425 (427)
....+ ..+.+.+.+.|+.+. +.++++++|.++
T Consensus 347 ~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l 386 (424)
T 2iya_A 347 VPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLREAVLAV 386 (424)
T ss_dssp CCCSHHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHHH
T ss_pred ecCccchHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHH
Confidence 98643 445666778898884 678999988765
No 43
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.21 E-value=8.4e-11 Score=119.78 Aligned_cols=122 Identities=14% Similarity=0.061 Sum_probs=86.6
Q ss_pred CCCCeEEEEEeecCC-----CCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChH
Q 014316 255 PNRPALVVSSTSWTP-----DEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKE 329 (427)
Q Consensus 255 ~~~~~~i~~~g~~~~-----~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~ 329 (427)
++++.++++.|++.. .+.+..+++|++.+ ++++++++++++.+
T Consensus 265 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~--------------------------------~~~~v~~~g~~~~~ 312 (441)
T 2yjn_A 265 PERRRVCLTLGISSRENSIGQVSIEELLGAVGDV--------------------------------DAEIIATFDAQQLE 312 (441)
T ss_dssp CSSCEEEEEC----------CCSTTTTHHHHHTS--------------------------------SSEEEECCCTTTTS
T ss_pred CCCCEEEEECCCCcccccChHHHHHHHHHHHHcC--------------------------------CCEEEEEECCcchh
Confidence 445668888999875 47888888888653 46777777665433
Q ss_pred HHHHHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----ccccee
Q 014316 330 SYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVK 404 (427)
Q Consensus 330 ~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~ 404 (427)
.++ ++ ++|.+.++ ++. .++|..||++|+- +-+.++.|||++|+|+|+....+ ..+.+.
T Consensus 313 ~l~------~~~~~v~~~~~-~~~---~~ll~~ad~~V~~-------~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~ 375 (441)
T 2yjn_A 313 GVA------NIPDNVRTVGF-VPM---HALLPTCAATVHH-------GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQ 375 (441)
T ss_dssp SCS------SCCSSEEECCS-CCH---HHHGGGCSEEEEC-------CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHH
T ss_pred hhc------cCCCCEEEecC-CCH---HHHHhhCCEEEEC-------CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHH
Confidence 221 23 48999996 664 5678999999961 12468999999999999998743 566777
Q ss_pred cCCcEEEeC----ChHHHHHHHHHh
Q 014316 405 VDKNGLLFS----SSSELADQLLVN 425 (427)
Q Consensus 405 ~~~~G~l~~----~~~~la~~l~~~ 425 (427)
+...|++++ ++++|+++|.++
T Consensus 376 ~~g~g~~~~~~~~~~~~l~~~i~~l 400 (441)
T 2yjn_A 376 EFGAGIALPVPELTPDQLRESVKRV 400 (441)
T ss_dssp HHTSEEECCTTTCCHHHHHHHHHHH
T ss_pred HcCCEEEcccccCCHHHHHHHHHHH
Confidence 788999884 678999988765
No 44
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.11 E-value=4.7e-09 Score=105.74 Aligned_cols=122 Identities=15% Similarity=0.105 Sum_probs=83.2
Q ss_pred CCCCeEEEEEeecC-CCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHH
Q 014316 255 PNRPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEE 333 (427)
Q Consensus 255 ~~~~~~i~~~g~~~-~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~ 333 (427)
++++.++++.|+.. +.+.+..+++++..+ ++++++.++++..+.
T Consensus 219 ~~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~--------------------------------~~~vv~~~g~~~~~~--- 263 (404)
T 3h4t_A 219 AGSPPVYVGFGSGPAPAEAARVAIEAVRAQ--------------------------------GRRVVLSSGWAGLGR--- 263 (404)
T ss_dssp TSSCCEEECCTTSCCCTTHHHHHHHHHHHT--------------------------------TCCEEEECTTTTCCC---
T ss_pred cCCCeEEEECCCCCCcHHHHHHHHHHHHhC--------------------------------CCEEEEEeCCccccc---
Confidence 34566788889987 666677777777653 355555544332221
Q ss_pred HHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcc----ccceecCCc
Q 014316 334 KIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI----EELVKVDKN 408 (427)
Q Consensus 334 ~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~----~e~v~~~~~ 408 (427)
.+. +||.+.++ ++. .+++..+|++|.- .+ ..++.|++++|+|+|.....+- .+.+.+.+.
T Consensus 264 ----~~~~~~v~~~~~-~~~---~~ll~~~d~~v~~----gG---~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~ 328 (404)
T 3h4t_A 264 ----IDEGDDCLVVGE-VNH---QVLFGRVAAVVHH----GG---AGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGV 328 (404)
T ss_dssp ----SSCCTTEEEESS-CCH---HHHGGGSSEEEEC----CC---HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTS
T ss_pred ----ccCCCCEEEecC-CCH---HHHHhhCcEEEEC----Cc---HHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCC
Confidence 122 58999986 654 6788999999962 11 1489999999999999875542 344666778
Q ss_pred EEEeC----ChHHHHHHHHHhc
Q 014316 409 GLLFS----SSSELADQLLVNA 426 (427)
Q Consensus 409 G~l~~----~~~~la~~l~~~~ 426 (427)
|..+. +.++|++++.++.
T Consensus 329 g~~l~~~~~~~~~l~~ai~~ll 350 (404)
T 3h4t_A 329 GVAHDGPTPTVESLSAALATAL 350 (404)
T ss_dssp EEECSSSSCCHHHHHHHHHHHT
T ss_pred EeccCcCCCCHHHHHHHHHHHh
Confidence 88873 5789999888763
No 45
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=99.03 E-value=4.4e-08 Score=103.12 Aligned_cols=106 Identities=15% Similarity=0.067 Sum_probs=79.9
Q ss_pred CeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEE--EEeCCC-ChHHHHHH
Q 014316 258 PALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFI--ITGKGP-DKESYEEK 334 (427)
Q Consensus 258 ~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--i~G~G~-~~~~~~~~ 334 (427)
.++++..++ ..|..+.++++++.+.++ .|+..+. +.|+++ ..+.+.+.
T Consensus 441 ~v~Fg~fn~--~~Ki~p~~l~~WarIL~~---------------------------vP~s~L~l~~~g~~~g~~~~~~~~ 491 (631)
T 3q3e_A 441 VVNIGIAST--TMKLNPYFLEALKAIRDR---------------------------AKVKVHFHFALGQSNGITHPYVER 491 (631)
T ss_dssp EEEEEEEEC--STTCCHHHHHHHHHHHHH---------------------------CSSEEEEEEEESSCCGGGHHHHHH
T ss_pred eEEEEECCc--cccCCHHHHHHHHHHHHh---------------------------CCCcEEEEEecCCCchhhHHHHHH
Confidence 345666665 468899999999999887 7776653 367432 12334444
Q ss_pred HHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC
Q 014316 335 IRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 335 ~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~ 397 (427)
+.+.|+ ++|.|.|. ++.++..+.|+.+|+++.| +.. +-|++.+|||+||+|||+...+
T Consensus 492 ~~~~GI~~Rv~F~g~-~p~~e~la~y~~aDIfLDp---fpy-~GgtTtlEALwmGVPVVTl~G~ 550 (631)
T 3q3e_A 492 FIKSYLGDSATAHPH-SPYHQYLRILHNCDMMVNP---FPF-GNTNGIIDMVTLGLVGVCKTGA 550 (631)
T ss_dssp HHHHHHGGGEEEECC-CCHHHHHHHHHTCSEEECC---SSS-CCSHHHHHHHHTTCCEEEECCS
T ss_pred HHHcCCCccEEEcCC-CCHHHHHHHHhcCcEEEeC---Ccc-cCChHHHHHHHcCCCEEeccCC
Confidence 566778 48999998 9999999999999999975 333 4589999999999999996533
No 46
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.99 E-value=1.4e-08 Score=102.30 Aligned_cols=118 Identities=13% Similarity=0.041 Sum_probs=81.7
Q ss_pred CCeEEEEEeecC-CCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEE-EeCCCChHHHHHH
Q 014316 257 RPALVVSSTSWT-PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII-TGKGPDKESYEEK 334 (427)
Q Consensus 257 ~~~~i~~~g~~~-~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i-~G~G~~~~~~~~~ 334 (427)
++.++++.|+.. +.+..+.++++++.+ + .++++ +|.+....
T Consensus 238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~-------------------------------~-~~~v~~~g~~~~~~----- 280 (415)
T 1iir_A 238 PPPVYLGFGSLGAPADAVRVAIDAIRAH-------------------------------G-RRVILSRGWADLVL----- 280 (415)
T ss_dssp SCCEEEECC---CCHHHHHHHHHHHHHT-------------------------------T-CCEEECTTCTTCCC-----
T ss_pred CCeEEEeCCCCCCcHHHHHHHHHHHHHC-------------------------------C-CeEEEEeCCCcccc-----
Confidence 355888889984 777777777877653 2 34444 47664320
Q ss_pred HHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceecCCcE
Q 014316 335 IRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDKNG 409 (427)
Q Consensus 335 ~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~~~~G 409 (427)
.++ ++|.+.+. ++.. +++..||++|.- + =.+++.|||++|+|+|+....+ ..+.+.+.+.|
T Consensus 281 ---~~~~~~v~~~~~-~~~~---~~l~~~d~~v~~-----~--G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g 346 (415)
T 1iir_A 281 ---PDDGADCFAIGE-VNHQ---VLFGRVAAVIHH-----G--GAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVG 346 (415)
T ss_dssp ---SSCGGGEEECSS-CCHH---HHGGGSSEEEEC-----C--CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSE
T ss_pred ---cCCCCCEEEeCc-CChH---HHHhhCCEEEeC-----C--ChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCc
Confidence 123 48999885 7754 568999999962 1 1269999999999999997644 45667777889
Q ss_pred EEeC----ChHHHHHHHHHh
Q 014316 410 LLFS----SSSELADQLLVN 425 (427)
Q Consensus 410 ~l~~----~~~~la~~l~~~ 425 (427)
+.++ +.++++++|.++
T Consensus 347 ~~~~~~~~~~~~l~~~i~~l 366 (415)
T 1iir_A 347 VAHDGPIPTFDSLSAALATA 366 (415)
T ss_dssp EECSSSSCCHHHHHHHHHHH
T ss_pred ccCCcCCCCHHHHHHHHHHH
Confidence 9884 678999998765
No 47
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=98.89 E-value=3.3e-09 Score=105.72 Aligned_cols=125 Identities=18% Similarity=0.156 Sum_probs=74.9
Q ss_pred CCCCCeEEEEEeecCCCCC-HHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHH
Q 014316 254 KPNRPALVVSSTSWTPDED-FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 332 (427)
Q Consensus 254 ~~~~~~~i~~~g~~~~~K~-~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~ 332 (427)
.++++.++++.|++...++ .+.+.+++..+.+ .+..+++.+.+...+..
T Consensus 234 ~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~-----------------------------~~~~~v~~~~~~~~~~~- 283 (400)
T 4amg_A 234 AAGRRRIAVTLGSIDALSGGIAKLAPLFSEVAD-----------------------------VDAEFVLTLGGGDLALL- 283 (400)
T ss_dssp CTTCCEEEECCCSCC--CCSSSTTHHHHHHGGG-----------------------------SSSEEEEECCTTCCCCC-
T ss_pred cCCCcEEEEeCCcccccCccHHHHHHHHHHhhc-----------------------------cCceEEEEecCcccccc-
Confidence 4455667777788765443 3344444444432 23555555544332211
Q ss_pred HHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceecCC
Q 014316 333 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDK 407 (427)
Q Consensus 333 ~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~~~ 407 (427)
..+ +||.+.+ |++. .++|..+|++|. ++ =.+++.|||++|+|+|+....+ ..+.+.+..
T Consensus 284 -----~~~~~~v~~~~-~~p~---~~lL~~~~~~v~-----h~--G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G 347 (400)
T 4amg_A 284 -----GELPANVRVVE-WIPL---GALLETCDAIIH-----HG--GSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLG 347 (400)
T ss_dssp -----CCCCTTEEEEC-CCCH---HHHHTTCSEEEE-----CC--CHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHT
T ss_pred -----ccCCCCEEEEe-ecCH---HHHhhhhhheec-----cC--CccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCC
Confidence 123 5898877 4764 677899999885 22 3458999999999999976443 455666677
Q ss_pred cEEEeCChHHHHHHHHH
Q 014316 408 NGLLFSSSSELADQLLV 424 (427)
Q Consensus 408 ~G~l~~~~~~la~~l~~ 424 (427)
.|+.+++.+..+++|.+
T Consensus 348 ~g~~l~~~~~~~~al~~ 364 (400)
T 4amg_A 348 IGFDAEAGSLGAEQCRR 364 (400)
T ss_dssp SEEECCTTTCSHHHHHH
T ss_pred CEEEcCCCCchHHHHHH
Confidence 88888655444555544
No 48
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.85 E-value=1.1e-07 Score=95.84 Aligned_cols=118 Identities=12% Similarity=0.007 Sum_probs=80.6
Q ss_pred CCeEEEEEeecC---CCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEE-EeCCCChHHHH
Q 014316 257 RPALVVSSTSWT---PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFII-TGKGPDKESYE 332 (427)
Q Consensus 257 ~~~~i~~~g~~~---~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i-~G~G~~~~~~~ 332 (427)
++.++++.|+.. +.+.+..++++++.+ +.++++ +|.++.. .
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~--------------------------------~~~~v~~~g~~~~~--~- 281 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQ--------------------------------GRRVILSRGWTELV--L- 281 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHT--------------------------------TCCEEEECTTTTCC--C-
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHC--------------------------------CCeEEEEeCCcccc--c-
Confidence 355778888875 345556666666542 244554 4766431 1
Q ss_pred HHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceecCC
Q 014316 333 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVDK 407 (427)
Q Consensus 333 ~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~~~ 407 (427)
..+ +++.+.+. ++. .+++..||++|+ ++ =.+++.||+++|+|+|+....+ ..+.+.+..
T Consensus 282 -----~~~~~~v~~~~~-~~~---~~ll~~~d~~v~-----~~--G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g 345 (416)
T 1rrv_A 282 -----PDDRDDCFAIDE-VNF---QALFRRVAAVIH-----HG--SAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALG 345 (416)
T ss_dssp -----SCCCTTEEEESS-CCH---HHHGGGSSEEEE-----CC--CHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHT
T ss_pred -----cCCCCCEEEecc-CCh---HHHhccCCEEEe-----cC--ChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCC
Confidence 123 48999885 764 667899999996 21 1359999999999999987543 455666778
Q ss_pred cEEEeC----ChHHHHHHHHHh
Q 014316 408 NGLLFS----SSSELADQLLVN 425 (427)
Q Consensus 408 ~G~l~~----~~~~la~~l~~~ 425 (427)
.|+.++ +.++++++|.++
T Consensus 346 ~g~~~~~~~~~~~~l~~~i~~l 367 (416)
T 1rrv_A 346 IGVAHDGPTPTFESLSAALTTV 367 (416)
T ss_dssp SEEECSSSCCCHHHHHHHHHHH
T ss_pred CccCCCCCCCCHHHHHHHHHHh
Confidence 888873 568899988765
No 49
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=98.79 E-value=9.7e-09 Score=90.51 Aligned_cols=120 Identities=13% Similarity=0.066 Sum_probs=87.8
Q ss_pred CCCeEEEEEeecC---CCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHH
Q 014316 256 NRPALVVSSTSWT---PDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYE 332 (427)
Q Consensus 256 ~~~~~i~~~g~~~---~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~ 332 (427)
+++.++++.|++. +.|.+..++++++. . +.+++++++|+..+
T Consensus 20 ~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~-------------------------------~-~~~~~~~~g~~~~~--- 64 (170)
T 2o6l_A 20 ENGVVVFSLGSMVSNMTEERANVIASALAQ-------------------------------I-PQKVLWRFDGNKPD--- 64 (170)
T ss_dssp TTCEEEEECCSCCTTCCHHHHHHHHHHHTT-------------------------------S-SSEEEEECCSSCCT---
T ss_pred CCCEEEEECCCCcccCCHHHHHHHHHHHHh-------------------------------C-CCeEEEEECCcCcc---
Confidence 4466889999986 56677777777754 2 25677777665422
Q ss_pred HHHHHcCC-CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccC----ccccceecCC
Q 014316 333 EKIRRLRL-KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIEELVKVDK 407 (427)
Q Consensus 333 ~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~----g~~e~v~~~~ 407 (427)
++ ++|.|.|+ ++.+++..+ ..||++|+. +-++++.|||++|+|+|+.... +..+.+.+..
T Consensus 65 ------~~~~~v~~~~~-~~~~~~l~~-~~ad~~I~~-------~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g 129 (170)
T 2o6l_A 65 ------TLGLNTRLYKW-IPQNDLLGH-PKTRAFITH-------GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARG 129 (170)
T ss_dssp ------TCCTTEEEESS-CCHHHHHTS-TTEEEEEEC-------CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTT
T ss_pred ------cCCCcEEEecC-CCHHHHhcC-CCcCEEEEc-------CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcC
Confidence 23 48999996 776544332 999999962 1357999999999999999864 3466777888
Q ss_pred cEEEeC----ChHHHHHHHHHh
Q 014316 408 NGLLFS----SSSELADQLLVN 425 (427)
Q Consensus 408 ~G~l~~----~~~~la~~l~~~ 425 (427)
.|++++ +.++|+++|.++
T Consensus 130 ~g~~~~~~~~~~~~l~~~i~~l 151 (170)
T 2o6l_A 130 AAVRVDFNTMSSTDLLNALKRV 151 (170)
T ss_dssp SEEECCTTTCCHHHHHHHHHHH
T ss_pred CeEEeccccCCHHHHHHHHHHH
Confidence 999984 678999998875
No 50
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=98.58 E-value=2.2e-06 Score=92.09 Aligned_cols=138 Identities=12% Similarity=0.110 Sum_probs=102.4
Q ss_pred CeEEEEEeecCCCCCHHH-HHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCC-ChHHHHHH-
Q 014316 258 PALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP-DKESYEEK- 334 (427)
Q Consensus 258 ~~~i~~~g~~~~~K~~~~-Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~-~~~~~~~~- 334 (427)
..+++++.|+..+|+.+. ++..+..+.+- .+.+......+.|++.|+|. ..+..++.
T Consensus 526 ~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i--------------------~~~~~~~~~p~q~If~GKA~P~y~~aK~iI 585 (796)
T 1l5w_A 526 AIFDIQIKRLHEYKRQHLNLLHILALYKEI--------------------RENPQADRVPRVFLFGAKAAPGYYLAKNII 585 (796)
T ss_dssp SEEEEEESCCCGGGTHHHHHHHHHHHHHHH--------------------HTCTTCCCCCEEEEEECCCCTTCHHHHHHH
T ss_pred cceEeeeecchhhcccCEeHHHHHHHHHHH--------------------hcCCCCCCCCeEEEEEecCChhHHHHHHHH
Confidence 358999999999999999 88888887652 11111122459999999885 33333222
Q ss_pred --HHHc--------CC-C--cEEEecCCCCcccHHHHHhcCcEEEeeccCCC--CCCCchHHHHHHcCCCcEEEeccCcc
Q 014316 335 --IRRL--------RL-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS--GLDLPMKVVDMFGCGLPVCAVSYSCI 399 (427)
Q Consensus 335 --~~~l--------~l-~--~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~--~e~~p~~~lEama~G~PVIas~~~g~ 399 (427)
+..+ .+ + +|.|+.. .+.+-...++.+||+.+.| |. .|.+|+.=+=+|..|.+.|++-.|..
T Consensus 586 k~i~~va~~in~Dp~~~~~lKVvfl~n-Y~vslA~~I~~gaDv~l~~---S~a~~EAsGTs~MKam~NGaL~iGtLDGan 661 (796)
T 1l5w_A 586 FAINKVADVINNDPLVGDKLKVVFLPD-YCVSAAEKLIPAADISEQI---STAGKEASGTGNMKLALNGALTVGTLDGAN 661 (796)
T ss_dssp HHHHHHHHHHHTCTTTGGGEEEEECSS-CCHHHHHHHGGGCSEEEEC---CCTTTCCCCSHHHHHHHTTCEEEECSCTTH
T ss_pred HHHHHHHHHhccccccCCceEEEEECC-CCHHHHHHHhhhcceeecC---CCCCCCCCchHHHHHHHcCCeeecCcCCee
Confidence 2222 23 2 5998876 7888889999999999997 55 59999999999999999999998888
Q ss_pred ccceec--CCcEEEeC-ChHHHH
Q 014316 400 EELVKV--DKNGLLFS-SSSELA 419 (427)
Q Consensus 400 ~e~v~~--~~~G~l~~-~~~~la 419 (427)
.|+.++ .+|||+|+ +++++.
T Consensus 662 vEi~e~vG~~NgF~FG~~~~ev~ 684 (796)
T 1l5w_A 662 VEIAEKVGEENIFIFGHTVEQVK 684 (796)
T ss_dssp HHHHHHHCGGGSEECSCCHHHHH
T ss_pred eehhhccCCCcEEEecCCHHHHH
Confidence 887654 56999994 445544
No 51
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=98.12 E-value=0.00024 Score=70.05 Aligned_cols=105 Identities=13% Similarity=0.101 Sum_probs=73.0
Q ss_pred cCCCCCeEEEEEeecCCCCC--HHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHH
Q 014316 253 LKPNRPALVVSSTSWTPDED--FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKES 330 (427)
Q Consensus 253 ~~~~~~~~i~~~g~~~~~K~--~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~ 330 (427)
+.++++.+.+..|.-.+.|. .+.+.+.+..+.++ ++.+++.|...+.+.
T Consensus 181 ~~~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~-----------------------------g~~vvl~g~~~e~~~ 231 (349)
T 3tov_A 181 LTDTDILIGFNIGSAVPEKRWPAERFAHVADYFGRL-----------------------------GYKTVFFGGPMDLEM 231 (349)
T ss_dssp CCTTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHH-----------------------------TCEEEECCCTTTHHH
T ss_pred CCCCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhC-----------------------------CCeEEEEeCcchHHH
Confidence 34455656666665334444 46777877777654 467778887666666
Q ss_pred HHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 331 YEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 331 ~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
.++..+.++-..+.+.|. .+..++.++++.||++|.. . .|..=+ |.|+|+|+|+--
T Consensus 232 ~~~i~~~~~~~~~~l~g~-~sl~e~~ali~~a~~~i~~---D----sG~~Hl-Aaa~g~P~v~lf 287 (349)
T 3tov_A 232 VQPVVEQMETKPIVATGK-FQLGPLAAAMNRCNLLITN---D----SGPMHV-GISQGVPIVALY 287 (349)
T ss_dssp HHHHHHTCSSCCEECTTC-CCHHHHHHHHHTCSEEEEE---S----SHHHHH-HHTTTCCEEEEC
T ss_pred HHHHHHhcccccEEeeCC-CCHHHHHHHHHhCCEEEEC---C----CCHHHH-HHhcCCCEEEEE
Confidence 676766655334677776 8889999999999999974 2 233344 899999999864
No 52
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=98.06 E-value=0.0001 Score=71.83 Aligned_cols=103 Identities=16% Similarity=0.152 Sum_probs=69.8
Q ss_pred CCCCeEEEEEee-cCCCCCH--HHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHH
Q 014316 255 PNRPALVVSSTS-WTPDEDF--GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESY 331 (427)
Q Consensus 255 ~~~~~~i~~~g~-~~~~K~~--~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~ 331 (427)
.+++.+++..|. ..+.|.. +.+.+++..+.++ +++++++|...+.+..
T Consensus 178 ~~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~-----------------------------~~~vvl~g~~~e~~~~ 228 (348)
T 1psw_A 178 SERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE-----------------------------GYQVVLFGSAKDHEAG 228 (348)
T ss_dssp SSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT-----------------------------TCEEEECCCGGGHHHH
T ss_pred CCCcEEEEECCCCccccCCCCHHHHHHHHHHHHHC-----------------------------CCeEEEEeChhhHHHH
Confidence 345666677776 5555554 4788887777652 5788888866555545
Q ss_pred HHHHHHcCC---Cc-EEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 332 EEKIRRLRL---KR-VAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 332 ~~~~~~l~l---~~-V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
+++.+.++- .+ +.+.|. .+..++.++++.||++|.. +++ .+-.|.|+|+|+|+--
T Consensus 229 ~~i~~~~~~~~~~~~~~l~g~-~sl~e~~ali~~a~l~I~~---Dsg-----~~HlAaa~g~P~v~lf 287 (348)
T 1psw_A 229 NEILAALNTEQQAWCRNLAGE-TQLDQAVILIAACKAIVTN---DSG-----LMHVAAALNRPLVALY 287 (348)
T ss_dssp HHHHTTSCHHHHTTEEECTTT-SCHHHHHHHHHTSSEEEEE---SSH-----HHHHHHHTTCCEEEEE
T ss_pred HHHHHhhhhccccceEeccCc-CCHHHHHHHHHhCCEEEec---CCH-----HHHHHHHcCCCEEEEE
Confidence 555443321 13 466676 8889999999999999974 322 3444999999999864
No 53
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=98.01 E-value=0.00082 Score=64.32 Aligned_cols=66 Identities=11% Similarity=0.065 Sum_probs=51.4
Q ss_pred EEEEEeCCC-ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEecc
Q 014316 318 LFIITGKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY 396 (427)
Q Consensus 318 ~l~i~G~G~-~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~ 396 (427)
..++.|.|. ..+++++.+++. .++.+.++ .+++.++|++||++|+. -|+++.|++++|+|.|....
T Consensus 186 i~vv~G~~~~~~~~l~~~~~~~--~~v~v~~~---~~~m~~~m~~aDlvI~~--------gG~T~~E~~~~g~P~i~ip~ 252 (282)
T 3hbm_A 186 ISIATSSSNPNLKKLQKFAKLH--NNIRLFID---HENIAKLMNESNKLIIS--------ASSLVNEALLLKANFKAICY 252 (282)
T ss_dssp EEEEECTTCTTHHHHHHHHHTC--SSEEEEES---CSCHHHHHHTEEEEEEE--------SSHHHHHHHHTTCCEEEECC
T ss_pred EEEEECCCchHHHHHHHHHhhC--CCEEEEeC---HHHHHHHHHHCCEEEEC--------CcHHHHHHHHcCCCEEEEeC
Confidence 346677764 456666665543 48999998 89999999999999973 24699999999999998764
No 54
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=97.79 E-value=0.00011 Score=79.10 Aligned_cols=224 Identities=13% Similarity=0.012 Sum_probs=137.5
Q ss_pred HHHhccCCEEEEcCHHHHHHHHH--------hhCCeEEEecCC-CCCCcCC-CChHHHHHHHhhhhhcccCCCCcccccc
Q 014316 161 KYYGKMANGCLCVTQAMQHELAQ--------NWGIKATVLYDQ-PPEFFHP-TSLEEKHELFCRLNKILHQPLGVQDCVS 230 (427)
Q Consensus 161 ~~~~~~ad~vi~vS~~~~~~l~~--------~~~~~~~vi~n~-~~~~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (427)
+.....|+.|-+||....+.++. .++.+..-|-|| +...+-. +.++...-+-..++. ..|..-+.-
T Consensus 397 ~lai~~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~--~~w~~d~~~-- 472 (796)
T 2c4m_A 397 WIACYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGS--DDWVTDLDE-- 472 (796)
T ss_dssp HHHHHHCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSS--SGGGGCGGG--
T ss_pred HHHHHhcCceeeccHHHHHHhhhhhhhhHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCc--hhhhhChHH--
Confidence 45556899999999988877763 224458889999 6665521 122222112122210 000000000
Q ss_pred CCCCCCC-ccchhh-----------hcc----ccccccc--CCCCCeEEEEEeecCCCCCHHH-HHHHHHhhHHHHhhhh
Q 014316 231 NGMEGQK-ADETIF-----------TSL----AGIDVFL--KPNRPALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAIL 291 (427)
Q Consensus 231 ~~~~~~~-~~~~~~-----------~~~----~~~~~~~--~~~~~~~i~~~g~~~~~K~~~~-Li~a~~~l~~~~~~~~ 291 (427)
.....+ +++..| +.. +.+..++ .++. .+++++.|+..+|+.+. ++..+..+.+-
T Consensus 473 -l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~-l~~~~vkRlheYKRq~Lnil~ii~~~~~i----- 545 (796)
T 2c4m_A 473 -LKKLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPES-IFDVQIKRLHEYKRQLMNALYVLDLYFRI----- 545 (796)
T ss_dssp -GGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTS-EEEEEECCCCGGGTHHHHHHHHHHHHHHH-----
T ss_pred -HHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC-cEEEEeecchhhcccCEeHHHHHHHHHHH-----
Confidence 000000 112111 000 1223332 3443 58999999999999999 88888887642
Q ss_pred ccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCC-ChHHHHHH---HHHc--------CC-C--cEEEecCCCCcccHH
Q 014316 292 NEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP-DKESYEEK---IRRL--------RL-K--RVAFRTMWLSAEDYP 356 (427)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~-~~~~~~~~---~~~l--------~l-~--~V~f~g~~~~~~~~~ 356 (427)
.+.+......+.|++.|+|. ..+..++. +..+ .+ + +|.|+.. .+.+-..
T Consensus 546 ---------------~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~n-Y~vslA~ 609 (796)
T 2c4m_A 546 ---------------KEDGLTDIPARTVIFGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVEN-YNVSPAE 609 (796)
T ss_dssp ---------------HTSCCCSSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETT-CCHHHHH
T ss_pred ---------------hhCCCCCCCCeEEEEEecCCHhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECC-CCHHHHH
Confidence 01111112358999999885 33332222 2222 23 3 5998877 7888889
Q ss_pred HHHhcCcEEEeeccCCC--CCCCchHHHHHHcCCCcEEEeccCccccceec--CCcEEEeCC
Q 014316 357 LLLGSADLGVCLHTSSS--GLDLPMKVVDMFGCGLPVCAVSYSCIEELVKV--DKNGLLFSS 414 (427)
Q Consensus 357 ~~l~~adi~v~p~~~s~--~e~~p~~~lEama~G~PVIas~~~g~~e~v~~--~~~G~l~~~ 414 (427)
.++.+||+.+.| |. .|.+|+.=+=+|..|.+.|++-.|...|+.++ .+|||+|+.
T Consensus 610 ~I~~gaDv~l~~---S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~NgF~FG~ 668 (796)
T 2c4m_A 610 HILPASDVSEQI---STAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSVGEENAYIFGA 668 (796)
T ss_dssp HHGGGCSEEEEC---CCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHHCGGGSEEESC
T ss_pred HHhhhcceeecC---CCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhhcCCCcEEEecC
Confidence 999999999997 55 59999999999999999999998888887654 469999954
No 55
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=97.73 E-value=0.00018 Score=77.62 Aligned_cols=137 Identities=13% Similarity=0.069 Sum_probs=100.0
Q ss_pred CeEEEEEeecCCCCCHHHH-HHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCC-ChHHH----
Q 014316 258 PALVVSSTSWTPDEDFGIL-LEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP-DKESY---- 331 (427)
Q Consensus 258 ~~~i~~~g~~~~~K~~~~L-i~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~-~~~~~---- 331 (427)
..+++++.|+..+|+.+.+ +..+..+.+- .+.+..+.....|++.|+|. ..+..
T Consensus 550 ~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i--------------------~~~~~~~~~p~q~If~GKA~P~y~~aK~iI 609 (824)
T 2gj4_A 550 SLFDVQVKRIHEYKRQLLNCLHVITLYNRI--------------------KKEPNKFVVPRTVMIGGKAAPGYHMAKMII 609 (824)
T ss_dssp SEEEEEESCCCGGGTHHHHHHHHHHHHHHH--------------------HHCTTSCCCCEEEEEECCCCTTCHHHHHHH
T ss_pred cceEeeeecchhhcchhhHHHHHHHHHHHH--------------------HhCCCCCCCCEEEEEEEeCCHhHHHHHHHH
Confidence 3589999999999999998 7888777531 01111122258999999885 33332
Q ss_pred ---HHHHHHcC----C-C--cEEEecCCCCcccHHHHHhcCcEEEeeccCCC--CCCCchHHHHHHcCCCcEEEeccCcc
Q 014316 332 ---EEKIRRLR----L-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS--GLDLPMKVVDMFGCGLPVCAVSYSCI 399 (427)
Q Consensus 332 ---~~~~~~l~----l-~--~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~--~e~~p~~~lEama~G~PVIas~~~g~ 399 (427)
.+.++..+ + + +|.|+.. .+.+-...++.+||+.+.| |. .|.+|+.=+=+|..|.+.|+|-.|..
T Consensus 610 kli~~va~~in~Dp~v~~~lKVvFl~n-YdvslA~~I~~gaDv~l~~---S~ag~EAsGTs~MKamlNGaLtigtlDGan 685 (824)
T 2gj4_A 610 KLITAIGDVVNHDPVVGDRLRVIFLEN-YRVSLAEKVIPAADLSEQI---STAGTEASGTGNMKFMLNGALTIGTMDGAN 685 (824)
T ss_dssp HHHHHHHHHHTTCTTTGGGEEEEEETT-CCHHHHHHHGGGCSEEEEC---CCTTSCSCCSHHHHHHHTTCEEEECSCTTH
T ss_pred HHHHHHHHHhccCcccCCceEEEEECC-CCHHHHHHHhhhcceeecC---CCCCCCCCchHHHHHHHcCceEEEEecCcc
Confidence 33333321 1 2 5888876 6888889999999999997 54 59999999999999999999988877
Q ss_pred cccee--cCCcEEEeCC-hHHH
Q 014316 400 EELVK--VDKNGLLFSS-SSEL 418 (427)
Q Consensus 400 ~e~v~--~~~~G~l~~~-~~~l 418 (427)
.|+.+ .++|||+|+. .+++
T Consensus 686 vEi~e~vG~~Ngf~FG~~~~ev 707 (824)
T 2gj4_A 686 VEMAEEAGEENFFIFGMRVEDV 707 (824)
T ss_dssp HHHHHHHCGGGSEECSCCHHHH
T ss_pred chhhhccCCCCEEEeCCcHHHH
Confidence 67654 4678999954 5555
No 56
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=97.68 E-value=0.052 Score=55.22 Aligned_cols=74 Identities=15% Similarity=0.033 Sum_probs=51.6
Q ss_pred cEEEecCCCCcccHHHHHh--cCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccc-eecCCcEEEe-C
Q 014316 342 RVAFRTMWLSAEDYPLLLG--SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEEL-VKVDKNGLLF-S 413 (427)
Q Consensus 342 ~V~f~g~~~~~~~~~~~l~--~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~-v~~~~~G~l~-~ 413 (427)
++...+ |+++. ++|. ++|++|. ++ =.+++.|++++|+|+|+....+ .... +.+-+.|+.+ .
T Consensus 333 ~~~v~~-w~pq~---~vL~h~~~~~fvt-----h~--G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~ 401 (463)
T 2acv_A 333 KGMICG-WAPQV---EVLAHKAIGGFVS-----HC--GWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRV 401 (463)
T ss_dssp SEEEES-SCCHH---HHHHSTTEEEEEE-----CC--CHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCS
T ss_pred CEEEEc-cCCHH---HHhCCCccCeEEe-----cC--CchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEec
Confidence 677777 78764 5676 6777774 32 1248999999999999987533 2334 4667788877 2
Q ss_pred ---------ChHHHHHHHHHhc
Q 014316 414 ---------SSSELADQLLVNA 426 (427)
Q Consensus 414 ---------~~~~la~~l~~~~ 426 (427)
+.++++++|.++.
T Consensus 402 ~~~~~~~~~~~~~l~~ai~~ll 423 (463)
T 2acv_A 402 DYRKGSDVVAAEEIEKGLKDLM 423 (463)
T ss_dssp SCCTTCCCCCHHHHHHHHHHHT
T ss_pred ccCCCCccccHHHHHHHHHHHH
Confidence 3588988887753
No 57
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=97.52 E-value=0.08 Score=53.84 Aligned_cols=77 Identities=14% Similarity=0.215 Sum_probs=53.5
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceecC-CcEEEeC--
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVD-KNGLLFS-- 413 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~~-~~G~l~~-- 413 (427)
+|+...+ |+++ .++|+.+++.++. +++ | .++++|++++|+|+|+-...+ ....+.+. +.|+.++
T Consensus 327 ~~~~vv~-w~Pq---~~vL~h~~v~~fv---tH~-G-~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~ 397 (454)
T 3hbf_A 327 TKGKIVA-WAPQ---VEILKHSSVGVFL---THS-G-WNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNG 397 (454)
T ss_dssp TTEEEES-SCCH---HHHHHSTTEEEEE---ECC-C-HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGG
T ss_pred CceEEEe-eCCH---HHHHhhcCcCeEE---ecC-C-cchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCC
Confidence 4788876 7886 5788999965543 333 1 248999999999999987432 23345554 7888873
Q ss_pred --ChHHHHHHHHHhc
Q 014316 414 --SSSELADQLLVNA 426 (427)
Q Consensus 414 --~~~~la~~l~~~~ 426 (427)
+.++++++++++.
T Consensus 398 ~~~~~~l~~av~~ll 412 (454)
T 3hbf_A 398 VLTKESIKKALELTM 412 (454)
T ss_dssp SCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 3588888887653
No 58
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=97.49 E-value=0.015 Score=59.27 Aligned_cols=74 Identities=12% Similarity=0.046 Sum_probs=52.5
Q ss_pred CcEEEecCCCCcccHHHHHh--cCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccceecC-CcEEEeC
Q 014316 341 KRVAFRTMWLSAEDYPLLLG--SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELVKVD-KNGLLFS 413 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~--~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v~~~-~~G~l~~ 413 (427)
+++...+ |+++ .++|. ++|++|. ++ =.+++.|++++|+|+|+....+ ....+.+. +.|+.+.
T Consensus 325 ~~~~v~~-w~pq---~~vL~h~~~~~fvt-----h~--G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~ 393 (456)
T 2c1x_A 325 GYGMVVP-WAPQ---AEVLAHEAVGAFVT-----HC--GWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIE 393 (456)
T ss_dssp TTEEEES-CCCH---HHHHTSTTEEEEEE-----CC--CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECG
T ss_pred CceEEec-CCCH---HHHhcCCcCCEEEe-----cC--CcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEec
Confidence 4788877 6876 36788 6677774 32 1248999999999999987432 33455566 7888873
Q ss_pred ----ChHHHHHHHHHh
Q 014316 414 ----SSSELADQLLVN 425 (427)
Q Consensus 414 ----~~~~la~~l~~~ 425 (427)
+.++++++++++
T Consensus 394 ~~~~~~~~l~~~i~~l 409 (456)
T 2c1x_A 394 GGVFTKSGLMSCFDQI 409 (456)
T ss_dssp GGSCCHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHH
Confidence 468888888765
No 59
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=97.38 E-value=0.04 Score=56.30 Aligned_cols=77 Identities=14% Similarity=0.179 Sum_probs=52.7
Q ss_pred CcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccce-ecCCcEEEeC--
Q 014316 341 KRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELV-KVDKNGLLFS-- 413 (427)
Q Consensus 341 ~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v-~~~~~G~l~~-- 413 (427)
+|+.+.+ |+++. ++|+.+++.++. +++ =.+++.|++++|+|+|+....+ ....+ ++-+.|+.+.
T Consensus 353 ~~~~v~~-~~pq~---~~L~h~~~~~~v---th~--G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~ 423 (482)
T 2pq6_A 353 DRGLIAS-WCPQD---KVLNHPSIGGFL---THC--GWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTN 423 (482)
T ss_dssp TTEEEES-CCCHH---HHHTSTTEEEEE---ECC--CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSS
T ss_pred CCEEEEe-ecCHH---HHhcCCCCCEEE---ecC--CcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEECCC
Confidence 4788887 68874 588776763332 332 1248999999999999997543 23334 3567788774
Q ss_pred -ChHHHHHHHHHhc
Q 014316 414 -SSSELADQLLVNA 426 (427)
Q Consensus 414 -~~~~la~~l~~~~ 426 (427)
+.++++++|.++.
T Consensus 424 ~~~~~l~~~i~~ll 437 (482)
T 2pq6_A 424 VKREELAKLINEVI 437 (482)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 5688888887753
No 60
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=97.30 E-value=0.11 Score=52.97 Aligned_cols=73 Identities=15% Similarity=0.125 Sum_probs=48.5
Q ss_pred ecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc----cccce-ecCCcEEEeC-------
Q 014316 346 RTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC----IEELV-KVDKNGLLFS------- 413 (427)
Q Consensus 346 ~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g----~~e~v-~~~~~G~l~~------- 413 (427)
...|+++ .++|+.+++.++. +++ | -++++||+++|+|+|+-...+ ....+ ++-+.|+.+.
T Consensus 343 v~~w~Pq---~~vL~h~~v~~fv---tHg-G-~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~ 414 (480)
T 2vch_A 343 IPFWAPQ---AQVLAHPSTGGFL---THC-G-WNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLV 414 (480)
T ss_dssp EESCCCH---HHHHHSTTEEEEE---ECC-C-HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCC
T ss_pred EeCccCH---HHHhCCCCcCeEE---ecc-c-chhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCcc
Confidence 3346876 4889999975443 333 1 248999999999999987533 23333 4566777662
Q ss_pred ChHHHHHHHHHhc
Q 014316 414 SSSELADQLLVNA 426 (427)
Q Consensus 414 ~~~~la~~l~~~~ 426 (427)
+.++++++|+++.
T Consensus 415 ~~~~l~~av~~vl 427 (480)
T 2vch_A 415 RREEVARVVKGLM 427 (480)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHh
Confidence 3588888887753
No 61
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.08 E-value=0.0021 Score=69.41 Aligned_cols=113 Identities=12% Similarity=0.036 Sum_probs=84.4
Q ss_pred ccccccCCCCCeEEEEEeecCCCCCHHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCC-
Q 014316 248 GIDVFLKPNRPALVVSSTSWTPDEDFGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP- 326 (427)
Q Consensus 248 ~~~~~~~~~~~~~i~~~g~~~~~K~~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~- 326 (427)
|...+++.+. ++++...++ .|=-+..+++...+.++ .|+.+|++...+.
T Consensus 514 R~~~gLp~~~-v~f~~fN~~--~Ki~p~~~~~W~~IL~~---------------------------vP~S~L~Ll~~~~~ 563 (723)
T 4gyw_A 514 RSQYGLPEDA-IVYCNFNQL--YKIDPSTLQMWANILKR---------------------------VPNSVLWLLRFPAV 563 (723)
T ss_dssp GGGGTCCTTS-EEEECCSCG--GGCCHHHHHHHHHHHHH---------------------------CSSEEEEEEETTGG
T ss_pred hhhcCCCCCC-EEEEeCCcc--ccCCHHHHHHHHHHHHh---------------------------CCCCeEEEEeCcHH
Confidence 3444555543 345444444 35567788888888777 8999998877543
Q ss_pred ChHHHHHHHHHcCCC--cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 327 DKESYEEKIRRLRLK--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 327 ~~~~~~~~~~~l~l~--~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
..+.+++.+++.|++ +|.|.+. .+.++....++.+|+++=+ ...+=+.+.+||+.||+|||+-.
T Consensus 564 ~~~~l~~~~~~~gi~~~r~~f~~~-~~~~~~l~~~~~~Di~LDt----~p~~g~tT~~eal~~GvPvvt~~ 629 (723)
T 4gyw_A 564 GEPNIQQYAQNMGLPQNRIIFSPV-APKEEHVRRGQLADVCLDT----PLCNGHTTGMDVLWAGTPMVTMP 629 (723)
T ss_dssp GHHHHHHHHHHTTCCGGGEEEEEC-CCHHHHHHHGGGCSEEECC----SSSCCSHHHHHHHHTTCCEEBCC
T ss_pred HHHHHHHHHHhcCCCcCeEEECCC-CCHHHHHHHhCCCeEEeCC----CCcCCHHHHHHHHHcCCCEEEcc
Confidence 456788888898994 7999997 8999999999999999963 22334679999999999999865
No 62
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=96.82 E-value=0.057 Score=58.16 Aligned_cols=220 Identities=12% Similarity=0.092 Sum_probs=117.5
Q ss_pred HhhcCCcEEEEecccchhhhhhhcCCC----chHHHHHHHHHHHHhccCCEEEEcCHHHHHHHHHhhCCe-EEEecCC-C
Q 014316 123 SSLRRSAFIVDWHNFGYTLLSLSLGRR----SHFVSIYRWIEKYYGKMANGCLCVTQAMQHELAQNWGIK-ATVLYDQ-P 196 (427)
Q Consensus 123 ~~~~~~p~i~~~h~~~~~~~~~~~~~~----~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l~~~~~~~-~~vi~n~-~ 196 (427)
.+..+..+|-+||+.+.--+....... .......+.+.+ ..+..|.+++.|+.+.+.+.+.++.+ -.++..| |
T Consensus 432 ~k~~~~~~iq~wHG~~lK~~g~d~~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~s~~~~~~~~~~f~~~~~~i~~~G~P 510 (729)
T 3l7i_A 432 NKKENQTYIQTWHGTPLKRLANDMKVVRMPGTTTPKYKRNFNR-ETSRWDYLISPNRYSTEIFRSAFWMDEERILEIGYP 510 (729)
T ss_dssp CCCTTCEEEECCSSCCSBCCGGGCSCCCCTTCCHHHHHHHHHH-HHTTCSEEEESSHHHHHHHHHHTCCCGGGEEESCCG
T ss_pred ccCCCcEEEECCCCCchhhccccccccccccccCHHHHHHHHH-hhccCCEEEeCCHHHHHHHHHHhCCCcceEEEcCCC
Confidence 344567788899998542111111000 111111111112 23568999999999999998888875 3444445 2
Q ss_pred -CC-Cc-CCCChHHHHHHHhhhhhcccCCCCccccccCCCCCCCccchhhhcccccccccCCCCCeEEEEEeecCCCCC-
Q 014316 197 -PE-FF-HPTSLEEKHELFCRLNKILHQPLGVQDCVSNGMEGQKADETIFTSLAGIDVFLKPNRPALVVSSTSWTPDED- 272 (427)
Q Consensus 197 -~~-~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~K~- 272 (427)
.+ .| .+...+...++..+ ++++.++ .+|+|+-+|.+...
T Consensus 511 R~D~l~~~~~~~~~~~~~~~~------------------------------------~~~~~~k-k~ILyaPT~r~~~~~ 553 (729)
T 3l7i_A 511 RNDVLVNRANDQEYLDEIRTH------------------------------------LNLPSDK-KVIMYAPTWRDDEFV 553 (729)
T ss_dssp GGHHHHHSTTCHHHHHHHHHH------------------------------------TTCCSSC-EEEEECCCCCGGGCC
T ss_pred chHHHhcccchHHHHHHHHHH------------------------------------hCCCCCC-eEEEEeeeeeCCccc
Confidence 12 12 11122223333322 2444444 48999988876421
Q ss_pred --------HHHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCChHHHHHHHHHcCCC-cE
Q 014316 273 --------FGILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDKESYEEKIRRLRLK-RV 343 (427)
Q Consensus 273 --------~~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~~~~~~~~~~l~l~-~V 343 (427)
...-++.+.+.. .+++.+++-..- .........+.+ .+
T Consensus 554 ~~~~~~~~~~~~~~~l~~~l-----------------------------~~~~~li~r~Hp----~~~~~~~~~~~~~~~ 600 (729)
T 3l7i_A 554 SKGKYLFELKIDLDNLYKEL-----------------------------GDDYVILLRMHY----LISNALDLSGYENFA 600 (729)
T ss_dssp GGGSSCCCCTTCHHHHHHHH-----------------------------TTTEEEEECCCH----HHHTTCCCTTCTTTE
T ss_pred cccccccchhhHHHHHHHHc-----------------------------CCCeEEEEecCc----chhccccccccCCcE
Confidence 111122222211 236777775421 111111101222 34
Q ss_pred EEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEecc--Cc----cccc---eecCCcEEEeCC
Q 014316 344 AFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSY--SC----IEEL---VKVDKNGLLFSS 414 (427)
Q Consensus 344 ~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~--~g----~~e~---v~~~~~G~l~~~ 414 (427)
..... .+++.+++..||++|. . .+.+++|++..++|||-... .. .+.+ ..+..-|-++.+
T Consensus 601 ~~~~~---~~di~~ll~~aD~lIT--D------ySSv~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d~~~~~pg~~~~~ 669 (729)
T 3l7i_A 601 IDVSN---YNDVSELFLISDCLIT--D------YSSVMFDYGILKRPQFFFAYDIDKYDKGLRGFYMNYMEDLPGPIYTE 669 (729)
T ss_dssp EECTT---CSCHHHHHHTCSEEEE--S------SCTHHHHHGGGCCCEEEECTTTTTTTSSCCSBSSCTTSSSSSCEESS
T ss_pred EeCCC---CcCHHHHHHHhCEEEe--e------chHHHHhHHhhCCCEEEecCCHHHHhhccCCcccChhHhCCCCeECC
Confidence 44343 6799999999999995 2 23389999999999997731 11 1111 122345777788
Q ss_pred hHHHHHHHHH
Q 014316 415 SSELADQLLV 424 (427)
Q Consensus 415 ~~~la~~l~~ 424 (427)
.++|.++|..
T Consensus 670 ~~eL~~~i~~ 679 (729)
T 3l7i_A 670 PYGLAKELKN 679 (729)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhh
Confidence 8999888764
No 63
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=95.75 E-value=0.0049 Score=56.83 Aligned_cols=73 Identities=8% Similarity=-0.007 Sum_probs=49.6
Q ss_pred cEEEecCCCCcccHHHHHh-cCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcc--------ccceecCCcEEEe
Q 014316 342 RVAFRTMWLSAEDYPLLLG-SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCI--------EELVKVDKNGLLF 412 (427)
Q Consensus 342 ~V~f~g~~~~~~~~~~~l~-~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~--------~e~v~~~~~G~l~ 412 (427)
++...++ .+++.++|. .||++|+ +. =..++.|++++|+|.|....... .+.+.+...++++
T Consensus 115 ~v~v~~f---~~~m~~~l~~~AdlvIs-----ha--GagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~~~~ 184 (224)
T 2jzc_A 115 KVIGFDF---STKMQSIIRDYSDLVIS-----HA--GTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSC 184 (224)
T ss_dssp EEEECCS---SSSHHHHHHHHCSCEEE-----SS--CHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHHSCCCEE
T ss_pred eEEEeec---cchHHHHHHhcCCEEEE-----CC--cHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHCCCEEEc
Confidence 4556666 589999999 9999996 21 12489999999999999875421 2233333345544
Q ss_pred CChHHHHHHHHHh
Q 014316 413 SSSSELADQLLVN 425 (427)
Q Consensus 413 ~~~~~la~~l~~~ 425 (427)
+++.|+++|.++
T Consensus 185 -~~~~L~~~i~~l 196 (224)
T 2jzc_A 185 -APTETGLIAGLR 196 (224)
T ss_dssp -CSCTTTHHHHHH
T ss_pred -CHHHHHHHHHHH
Confidence 566666666654
No 64
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=94.15 E-value=0.3 Score=52.82 Aligned_cols=148 Identities=14% Similarity=0.121 Sum_probs=98.4
Q ss_pred CeEEEEEeecCCCCCHHH-HHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCC-CChHHHHHH-
Q 014316 258 PALVVSSTSWTPDEDFGI-LLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKG-PDKESYEEK- 334 (427)
Q Consensus 258 ~~~i~~~g~~~~~K~~~~-Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G-~~~~~~~~~- 334 (427)
.+.++++-|+..+|.... ++..+..+.+-... ...|++.+.+ ++.-.| ..+++.|+- |.....++.
T Consensus 600 sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~~-~~~~~~p~~~---------~~~~~P-~~~IFaGKAaP~y~~aK~iI 668 (879)
T 1ygp_A 600 TLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKNM-LKNGASIEEV---------ARKYPR-KVSIFGGKSAPGYYMAKLII 668 (879)
T ss_dssp CEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHH-HHTTCCHHHH---------HHHSCC-EEEEEECCCCTTCHHHHHHH
T ss_pred eeeeeeeehhhHhHHHHHHHHHHHHHHHHHHhC-ccccCCCccc---------ccCCCC-eEEEEeccCCCCcHHHHHHH
Confidence 468999999999999988 67776666432000 0000000000 000133 889999974 333333333
Q ss_pred --HHHc--------CC-C--cEEEecCCCCcccHHHHHhcCcEEEeeccCC-CCCCCchHHHHHHcCCCcEEEeccCccc
Q 014316 335 --IRRL--------RL-K--RVAFRTMWLSAEDYPLLLGSADLGVCLHTSS-SGLDLPMKVVDMFGCGLPVCAVSYSCIE 400 (427)
Q Consensus 335 --~~~l--------~l-~--~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s-~~e~~p~~~lEama~G~PVIas~~~g~~ 400 (427)
+... .+ + +|.|+.- .+.+-...++.+||+...- |. ..|..|..=.=+|..|.+.|+|-.|...
T Consensus 669 klI~~va~~iN~Dp~v~~~LKVVFlen-Y~VslAe~iipaaDvseqi--stag~EASGTsnMKfalNGaLtlgtlDGanv 745 (879)
T 1ygp_A 669 KLINCVADIVNNDESIEHLLKVVFVAD-YNVSKAEIIIPASDLSEHI--STAGTEASGTSNMKFVMNGGLIIGTVDGANV 745 (879)
T ss_dssp HHHHHHHHHHTTCGGGTTSEEEEEETT-CCHHHHHHHGGGCSEEEEC--CCTTCCSCCHHHHHHHTTTCEEEEESCTHHH
T ss_pred HHHHHHHHHhccChhhCCceEEEEeCC-CCHHHHHHhhhhhhhhhhC--CCCCccccCchhhHHHHcCCeeeecccchhH
Confidence 2222 12 2 5999887 7888889999999999873 23 3399999999999999999999999998
Q ss_pred cceec--CCcEEEeCC-hHHHH
Q 014316 401 ELVKV--DKNGLLFSS-SSELA 419 (427)
Q Consensus 401 e~v~~--~~~G~l~~~-~~~la 419 (427)
|+.++ ++|+|+|+. .+++.
T Consensus 746 Ei~e~vG~eN~fiFG~~~~ev~ 767 (879)
T 1ygp_A 746 EITREIGEDNVFLFGNLSENVE 767 (879)
T ss_dssp HHHHHHCGGGSEEESCCHHHHH
T ss_pred HHHHHcCcccEEEccCCHHHHH
Confidence 88766 569999954 44443
No 65
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=92.43 E-value=0.17 Score=48.41 Aligned_cols=100 Identities=13% Similarity=0.074 Sum_probs=63.4
Q ss_pred CCCeEEEEEeecCCCCCH--HHHHHHHHhhHHHHhhhhccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCCCh-HHHH
Q 014316 256 NRPALVVSSTSWTPDEDF--GILLEAALMYDRRVAAILNEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGPDK-ESYE 332 (427)
Q Consensus 256 ~~~~~i~~~g~~~~~K~~--~~Li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~~~-~~~~ 332 (427)
+++.+++..|.-.+.|.. +.+.+.+..+.+ .++++++.+.++.+ +..+
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~-----------------------------~~~~vvl~~g~~~e~~~~~ 227 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLAD-----------------------------SGIRIKLPWGAPHEEERAK 227 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTT-----------------------------TCCEEEECCSSHHHHHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHH-----------------------------CCCcEEEecCCHHHHHHHH
Confidence 345555666654444443 466776666642 25777777444433 3334
Q ss_pred HHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 333 EKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 333 ~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
+..+. ..++.+.|. .+-.++.++++.||++|.. . .|..=+ |.|.|+|+|+--
T Consensus 228 ~i~~~--~~~~~l~g~-~sl~el~ali~~a~l~I~~---D----SG~~Hl-Aaa~g~P~v~lf 279 (326)
T 2gt1_A 228 RLAEG--FAYVEVLPK-MSLEGVARVLAGAKFVVSV---D----TGLSHL-TAALDRPNITVY 279 (326)
T ss_dssp HHHTT--CTTEEECCC-CCHHHHHHHHHTCSEEEEE---S----SHHHHH-HHHTTCCEEEEE
T ss_pred HHHhh--CCcccccCC-CCHHHHHHHHHhCCEEEec---C----CcHHHH-HHHcCCCEEEEE
Confidence 44333 235777787 8899999999999999974 2 233444 778999999863
No 66
>2k6g_A Replication factor C subunit 1; protein, BRCT, DNA binding, activator, alternative splicing, ATP-binding, DNA replication, DNA- binding; NMR {Homo sapiens} PDB: 2k7f_A
Probab=80.52 E-value=5.7 Score=31.81 Aligned_cols=83 Identities=18% Similarity=0.174 Sum_probs=55.9
Q ss_pred ccCCCchhhhhhhhhcCCcccCCCCEEEEEEeCCC--ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeec
Q 014316 292 NEDDSTNEEVFLKEISDGKQYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLH 369 (427)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~G~G~--~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~ 369 (427)
+++.|.+.... ++|.+.........|+|.|.=+ .+++++++++.+|- .+.+. ++ +.-|++|+
T Consensus 13 ~~~~p~~~g~~--~~p~~~~~~l~G~~~v~TG~l~~~~R~e~~~~i~~~Gg---~v~~s-VS--------kkTd~LV~-- 76 (109)
T 2k6g_A 13 NREGPKALGSK--EIPKGAENCLEGLIFVITGVLESIERDEAKSLIERYGG---KVTGN-VS--------KKTNYLVM-- 76 (109)
T ss_dssp TCCCCSSTTTS--CCCCCCTTTTTTCEEEEESBCSSCCHHHHHHHHHHTTC---EEESS-CC--------TTCCEEEE--
T ss_pred cccCCCCCCcc--cCCCCCCCCCCCCEEEEeeeCCCCCHHHHHHHHHHcCC---EeeCc-cc--------CCceEEEE--
Confidence 33444443332 4555655567789999999653 58999999999873 33444 33 56788886
Q ss_pred cCCCCCCCchHHHHHHcCCCcEEE
Q 014316 370 TSSSGLDLPMKVVDMFGCGLPVCA 393 (427)
Q Consensus 370 ~~s~~e~~p~~~lEama~G~PVIa 393 (427)
....+ +.|+-.|...|+|||.
T Consensus 77 --G~~~g-~sK~~kA~~lgI~Ii~ 97 (109)
T 2k6g_A 77 --GRDSG-QSKSDKAAALGTKIID 97 (109)
T ss_dssp --CBCCC-HHHHHHHHHHTCEEEC
T ss_pred --CCCCC-hHHHHHHHHcCCeEEe
Confidence 32211 4799999999999986
No 67
>2ebu_A Replication factor C subunit 1; A/B/A 3 layers, parallel beta-sheet, DNA replication, clamp loader, RFC1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.64 E-value=6.6 Score=31.66 Aligned_cols=75 Identities=20% Similarity=0.183 Sum_probs=54.4
Q ss_pred hhhcCCcccCCCCEEEEEEeCCC--ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHH
Q 014316 304 KEISDGKQYLYPRLLFIITGKGP--DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKV 381 (427)
Q Consensus 304 ~~~~~~~~~~~~~~~l~i~G~G~--~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~ 381 (427)
+++|.+....+....|+|.|.=+ .+++++++++.+|- .+.+. ++ +.-|++|+ .... -+.|+
T Consensus 13 k~~P~~~~~~l~G~~~v~TG~l~~~~R~e~~~~i~~~Gg---kv~~s-VS--------kkTd~LV~----G~~~-g~sKl 75 (112)
T 2ebu_A 13 KEIPKGAENCLEGLIFVITGVLESIERDEAKSLIERYGG---KVTGN-VS--------KKTNYLVM----GRDS-GQSKS 75 (112)
T ss_dssp SCCCCCCSSSSTTCEEEECSCCSSSCHHHHHHHHHHTTC---EECSS-CC--------SSCCEEEE----CSSC-CSHHH
T ss_pred ccCCCCCCCCcCCCEEEEeeeCCCCCHHHHHHHHHHcCC---EEecc-cc--------CCeeEEEe----cCCC-ChHHH
Confidence 46777766678889999999643 68899999999873 23343 33 56788886 3222 24799
Q ss_pred HHHHcCCCcEEEec
Q 014316 382 VDMFGCGLPVCAVS 395 (427)
Q Consensus 382 lEama~G~PVIas~ 395 (427)
-.|...|+|||.-+
T Consensus 76 ~KA~~lgI~IisE~ 89 (112)
T 2ebu_A 76 DKAAALGTKIIDED 89 (112)
T ss_dssp HHHHHHTCEEEEHH
T ss_pred HHHHHcCCeEEeHH
Confidence 99999999999743
No 68
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=59.31 E-value=11 Score=34.21 Aligned_cols=64 Identities=14% Similarity=-0.011 Sum_probs=41.2
Q ss_pred HHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCC-------CCCCchHHHHHHcCCCcEEEeccC
Q 014316 330 SYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSS-------GLDLPMKVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 330 ~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~-------~e~~p~~~lEama~G~PVIas~~~ 397 (427)
.+.+..+++|. .+..+-. .++..+.+.+||..++|=..+. ..++--.+-|+...|+|++.+..|
T Consensus 52 ~~~~al~~lG~-~~~~v~~---~~d~~~~l~~ad~I~lpGG~~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~sAG 122 (229)
T 1fy2_A 52 KTAEVLAPLGV-NVTGIHR---VADPLAAIEKAEIIIVGGGNTFQLLKESRERGLLAPMADRVKRGALYIGWSAG 122 (229)
T ss_dssp HHHHHHGGGTC-EEEETTS---SSCHHHHHHHCSEEEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHH
T ss_pred HHHHHHHHCCC-EEEEEec---cccHHHHHhcCCEEEECCCcHHHHHHHHHHCChHHHHHHHHHcCCEEEEECHH
Confidence 34555666775 3433322 3566688999999998621110 035556788888899999999755
No 69
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=54.33 E-value=19 Score=32.40 Aligned_cols=85 Identities=14% Similarity=0.118 Sum_probs=44.0
Q ss_pred CCCcceEEEEEeCCCCCChhHHHHHHHHHhh-CCCcEEEEecC-CCCCcccccCCCceEEEEeecCCCCCCCCcchhhHH
Q 014316 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYG-GSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPV 78 (427)
Q Consensus 1 ~~~~~~~~v~~~~~~~~~~r~~~~a~~La~~-~g~~V~vi~~~-~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~ 78 (427)
|++++|+.|++.|.- .-++....++.+. .+++|.++... .+....+.....||+++.++ +. .+. .
T Consensus 5 ~~~~~ri~vl~SG~g---snl~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~gIp~~~~~--~~---~~~-~---- 71 (215)
T 3kcq_A 5 MKKELRVGVLISGRG---SNLEALAKAFSTEESSVVISCVISNNAEARGLLIAQSYGIPTFVVK--RK---PLD-I---- 71 (215)
T ss_dssp --CCEEEEEEESSCC---HHHHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHTTCCEEECC--BT---TBC-H----
T ss_pred CCCCCEEEEEEECCc---HHHHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHcCCCEEEeC--cc---cCC-h----
Confidence 667788888777632 2333333333332 12566555443 33222334556699999887 32 111 1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCcEEEEcCC
Q 014316 79 LLLLKPLIQFFMLLWFLCVKIASPDVFLVQNP 110 (427)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~Dvv~~~~p 110 (427)
..+...+.+ .+||++++-..
T Consensus 72 ~~~~~~L~~------------~~~Dlivlagy 91 (215)
T 3kcq_A 72 EHISTVLRE------------HDVDLVCLAGF 91 (215)
T ss_dssp HHHHHHHHH------------TTCSEEEESSC
T ss_pred HHHHHHHHH------------hCCCEEEEeCC
Confidence 123333333 79999998863
No 70
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=49.81 E-value=16 Score=32.39 Aligned_cols=70 Identities=13% Similarity=0.140 Sum_probs=43.6
Q ss_pred ccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc-cc----cceecC------C-cEEEe-CChHHHH
Q 014316 353 EDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC-IE----ELVKVD------K-NGLLF-SSSSELA 419 (427)
Q Consensus 353 ~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g-~~----e~v~~~------~-~G~l~-~~~~~la 419 (427)
+.-..+...||.+|.. .-+-|-=..++|++..|+||+.-+..| .. .++.++ . +.+.+ +|++++.
T Consensus 110 ~Rk~~m~~~sda~Ivl---pGG~GTL~E~~eal~~~kPV~lln~~g~w~~~l~~~~~~G~fi~~~~~~~i~~~~~~ee~~ 186 (195)
T 1rcu_A 110 MRSFVLLRNADVVVSI---GGEIGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYLDNRRIVEIHQAWTVEEAV 186 (195)
T ss_dssp HHHHHHHTTCSEEEEE---SCCHHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBTTTBSSTTCCSCEEEESSHHHHH
T ss_pred HHHHHHHHhCCEEEEe---cCCCcHHHHHHHHHhcCCCEEEECCCCccHHHHHHHHHcCCcCCHHHcCeEEEeCCHHHHH
Confidence 3445667789999875 222122236889999999999997443 22 222222 1 23444 8899999
Q ss_pred HHHHHh
Q 014316 420 DQLLVN 425 (427)
Q Consensus 420 ~~l~~~ 425 (427)
+.|.+.
T Consensus 187 ~~l~~~ 192 (195)
T 1rcu_A 187 QIIEQI 192 (195)
T ss_dssp HHHHTC
T ss_pred HHHHHH
Confidence 888653
No 71
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=49.40 E-value=1e+02 Score=26.38 Aligned_cols=107 Identities=12% Similarity=0.038 Sum_probs=67.6
Q ss_pred CCEEEEEEeCCCC-hHHHHHHHHHcCCCcEEEecCCCCcccHHHHHh---------------cCcEEEeeccCCCCCCCc
Q 014316 315 PRLLFIITGKGPD-KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG---------------SADLGVCLHTSSSGLDLP 378 (427)
Q Consensus 315 ~~~~l~i~G~G~~-~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~---------------~adi~v~p~~~s~~e~~p 378 (427)
...+++|+-+.+. ...+++..++.|...|..... .++..+++. ..|++++= ......-|
T Consensus 60 ~~~~ILiVdDd~~~~~~l~~~L~~~g~~~v~~a~~---~~eal~~l~~~~~~~~~~~~~~~~~~dlillD--~~lp~~~G 134 (206)
T 3mm4_A 60 RGKRVLVVDDNFISRKVATGKLKKMGVSEVEQCDS---GKEALRLVTEGLTQREEQGSVDKLPFDYIFMD--CQMPEMDG 134 (206)
T ss_dssp TTCEEEEECSCHHHHHHHHHHHHHTTCSEEEEESS---HHHHHHHHHHHHHHHHHHTCSSCCSCSEEEEE--SCCSSSCH
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHHcCCCeeeeeCC---HHHHHHHHHhhcccccccccccCCCCCEEEEc--CCCCCCCH
Confidence 4567888887653 355677777777655655553 666666665 46888862 12223345
Q ss_pred hHHHHHHc-------CCCcEEEecc-C-c---cccceecCCcEEEeCChHHHHHHHHHhc
Q 014316 379 MKVVDMFG-------CGLPVCAVSY-S-C---IEELVKVDKNGLLFSSSSELADQLLVNA 426 (427)
Q Consensus 379 ~~~lEama-------~G~PVIas~~-~-g---~~e~v~~~~~G~l~~~~~~la~~l~~~~ 426 (427)
..+++.+. ..+|||.... . . ..+.++.|.++++..+.++|.+.|..+.
T Consensus 135 ~el~~~lr~~~~~~~~~~piI~ls~~~~~~~~~~~~~~~Ga~~~l~KP~~~L~~~i~~~l 194 (206)
T 3mm4_A 135 YEATREIRKVEKSYGVRTPIIAVSGHDPGSEEARETIQAGMDAFLDKSLNQLANVIREIE 194 (206)
T ss_dssp HHHHHHHHHHHHTTTCCCCEEEEESSCCCHHHHHHHHHHTCSEEEETTCTTHHHHHHHHC
T ss_pred HHHHHHHHhhhhhcCCCCcEEEEECCCCcHHHHHHHHhCCCCEEEcCcHHHHHHHHHHHH
Confidence 56666553 5678886543 2 2 3345567889999976568888877653
No 72
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=48.01 E-value=36 Score=30.33 Aligned_cols=57 Identities=11% Similarity=0.035 Sum_probs=31.3
Q ss_pred CcceEEEEEeCCCCCChhHHHHHHHHHhhC-CCcEEEEecC-CCCCcccccCCCceEEEEee
Q 014316 3 RRGRACVVVLGDLGRSPRMQYQALSLARQM-SLEVDVVAYG-GSKPHAAILEHPSIHIHTMT 62 (427)
Q Consensus 3 ~~~~~~v~~~~~~~~~~r~~~~a~~La~~~-g~~V~vi~~~-~~~~~~~~~~~~~i~v~~~~ 62 (427)
+|+++.|+..|.. .-++....++.+.. +++|..+... .+.+..+.....||+++.+.
T Consensus 2 ~m~ki~vl~sG~g---~~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~ 60 (212)
T 3av3_A 2 HMKRLAVFASGSG---TNFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFS 60 (212)
T ss_dssp CCEEEEEECCSSC---HHHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECC
T ss_pred CCcEEEEEEECCc---HHHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeC
Confidence 4567777766642 23444445555531 4677555433 33223334556799988876
No 73
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=46.27 E-value=44 Score=28.50 Aligned_cols=72 Identities=14% Similarity=0.129 Sum_probs=40.0
Q ss_pred hHHHHHHHHHhhCCCcEEEEecCCCCCccccc--CCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHh
Q 014316 20 RMQYQALSLARQMSLEVDVVAYGGSKPHAAIL--EHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCV 97 (427)
Q Consensus 20 r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~--~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (427)
-....|..|+++ |+.|.++-.+......... ...++.+.... . ..+.+.+.+
T Consensus 18 ~a~~la~~la~~-g~~vlliD~D~~~~~~~~~~~~~~~~~~~~~~--~-------------~~l~~~l~~---------- 71 (206)
T 4dzz_A 18 AVINIATALSRS-GYNIAVVDTDPQMSLTNWSKAGKAAFDVFTAA--S-------------EKDVYGIRK---------- 71 (206)
T ss_dssp HHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHTTSCCSSEEEECC--S-------------HHHHHTHHH----------
T ss_pred HHHHHHHHHHHC-CCeEEEEECCCCCCHHHHHhcCCCCCcEEecC--c-------------HHHHHHHHH----------
Confidence 356677888886 9999999865433222221 22344444333 1 111222221
Q ss_pred hhCCCcEEEEcCCCChhHHH
Q 014316 98 KIASPDVFLVQNPPSVPTLV 117 (427)
Q Consensus 98 ~~~~~Dvv~~~~p~~~~~~~ 117 (427)
-..++|+|++..|+......
T Consensus 72 l~~~yD~viiD~~~~~~~~~ 91 (206)
T 4dzz_A 72 DLADYDFAIVDGAGSLSVIT 91 (206)
T ss_dssp HTTTSSEEEEECCSSSSHHH
T ss_pred hcCCCCEEEEECCCCCCHHH
Confidence 12579999999988775443
No 74
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=44.99 E-value=34 Score=29.30 Aligned_cols=67 Identities=21% Similarity=0.201 Sum_probs=42.0
Q ss_pred HHHhcCcEEEeeccCCCCCCCchHHHH---HHcCCCcEEEec-----cCcc--------ccceec-------------CC
Q 014316 357 LLLGSADLGVCLHTSSSGLDLPMKVVD---MFGCGLPVCAVS-----YSCI--------EELVKV-------------DK 407 (427)
Q Consensus 357 ~~l~~adi~v~p~~~s~~e~~p~~~lE---ama~G~PVIas~-----~~g~--------~e~v~~-------------~~ 407 (427)
..+..||++|.... . .+.=+.+.+| |.|.|+||++-. .|+. .|+.++ ..
T Consensus 65 ~~i~~aD~viA~ld-g-~~~D~Gt~~EiG~A~a~gkPVi~~~~D~R~~g~~~~~~~~~~~~~~e~~f~~~N~~~~G~i~~ 142 (162)
T 3ehd_A 65 ENVLASDLLVALLD-G-PTIDAGVASEIGVAYAKGIPVVALYTDSRQQGADNHQKLDALNEIAENQFHYLNLYTVGLIKL 142 (162)
T ss_dssp HHHHTCSEEEEECC-S-SSCCHHHHHHHHHHHHTTCCEEEECCCGGGCCTTCHHHHHHTTSTTCCCSCCCCHHHHHHHHT
T ss_pred HHHHHCCEEEEECC-C-CCCCCCHHHHHHHHHHCCCEEEEEEcCcccccCCcchhhhhhHHHhhhhhhhhhHHHhhhHHh
Confidence 45899999987432 1 1222234445 789999999873 2221 111111 12
Q ss_pred cEEEeCChHHHHHHHHHh
Q 014316 408 NGLLFSSSSELADQLLVN 425 (427)
Q Consensus 408 ~G~l~~~~~~la~~l~~~ 425 (427)
+|.++.+.+++.+.|.+.
T Consensus 143 ~g~~~~~~~~~~~~l~~~ 160 (162)
T 3ehd_A 143 NGRVVSSEEDLLEEIKQR 160 (162)
T ss_dssp TEEEESSHHHHHHHHHHT
T ss_pred CCeEEeCHHHHHHHHHHH
Confidence 899999999999988765
No 75
>2vxb_A DNA repair protein RHP9; BRCT, nucleus, cell cycle, DNA damage, DNA replication inhibitor, phosphoprotein, checkpoint signalling; HET: DNA; 2.3A {Schizosaccharomyces pombe} PDB: 2vxc_A*
Probab=44.84 E-value=24 Score=32.16 Aligned_cols=77 Identities=13% Similarity=0.112 Sum_probs=41.6
Q ss_pred CCCEEEEEEeC----CCChHHHHHHHHHcCCCcEEEecC--CCCcccHHH-----------HHhcCc-EEEeeccCCCCC
Q 014316 314 YPRLLFIITGK----GPDKESYEEKIRRLRLKRVAFRTM--WLSAEDYPL-----------LLGSAD-LGVCLHTSSSGL 375 (427)
Q Consensus 314 ~~~~~l~i~G~----G~~~~~~~~~~~~l~l~~V~f~g~--~~~~~~~~~-----------~l~~ad-i~v~p~~~s~~e 375 (427)
+.+..|.|.|. +..++++++++++.|- .|.--|+ .++...... -....+ ..++ +...
T Consensus 3 F~g~~F~ls~~~~~~~~~k~~L~~~I~~~GG-~v~~~g~~~lf~~~~~~~~~~~~~~k~~~~~~~~~~t~li----a~~~ 77 (241)
T 2vxb_A 3 FDDCVFAFSGPVHEDAYDRSALETVVQDHGG-LVLDTGLRPLFNDPFKSKQKKLRHLKPQKRSKSWNQAFVV----SDTF 77 (241)
T ss_dssp TTTEEEEECCCSSTTSSCHHHHHHHHHHTTC-EECTTCSGGGBCCSCC----CCCSCCBCGGGGGCSEEEEE----CSSC
T ss_pred CCCcEEEEecCCCCchhhHHHHHHHHHHCCC-EEecCcchhhccCccccccccccccccccccccccceEEE----cCCC
Confidence 34678888886 2467889999999872 1111110 000000000 001111 2333 2222
Q ss_pred CCchHHHHHHcCCCcEEEec
Q 014316 376 DLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 376 ~~p~~~lEama~G~PVIas~ 395 (427)
.--.+.+.|+|.|+|||...
T Consensus 78 ~rt~K~~~ala~gipiV~~~ 97 (241)
T 2vxb_A 78 SRKVKYLEALAFNIPCVHPQ 97 (241)
T ss_dssp CCCHHHHHHHHHTCCEECTH
T ss_pred CCcHHHHHHHHcCCCEecHH
Confidence 34569999999999999985
No 76
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=44.74 E-value=56 Score=29.49 Aligned_cols=57 Identities=12% Similarity=0.021 Sum_probs=30.3
Q ss_pred CcceEEEEEeCCCCCChhHHHHHHHHHhh-CCCcEEE-EecCCCCCcccccCCCceEEEEee
Q 014316 3 RRGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDV-VAYGGSKPHAAILEHPSIHIHTMT 62 (427)
Q Consensus 3 ~~~~~~v~~~~~~~~~~r~~~~a~~La~~-~g~~V~v-i~~~~~~~~~~~~~~~~i~v~~~~ 62 (427)
+|+|++|+..|.. .-++....++.+. .+++|.. +|...+....+.....||+++.+.
T Consensus 21 ~~~rI~~l~SG~g---~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~ 79 (229)
T 3auf_A 21 HMIRIGVLISGSG---TNLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMD 79 (229)
T ss_dssp TCEEEEEEESSCC---HHHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECC
T ss_pred CCcEEEEEEeCCc---HHHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEEC
Confidence 3556776655532 2344444555553 1466644 443333222344556799999876
No 77
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=44.09 E-value=41 Score=30.00 Aligned_cols=54 Identities=9% Similarity=0.086 Sum_probs=28.8
Q ss_pred ceEEEEEeCCCCCChhHHHHHHHHHhhCCC--cEE-EEecCCCCCcccccCCCceEEEEee
Q 014316 5 GRACVVVLGDLGRSPRMQYQALSLARQMSL--EVD-VVAYGGSKPHAAILEHPSIHIHTMT 62 (427)
Q Consensus 5 ~~~~v~~~~~~~~~~r~~~~a~~La~~~g~--~V~-vi~~~~~~~~~~~~~~~~i~v~~~~ 62 (427)
+|++|+..|.. .-++....++.+. ++ +|. |+|...+....+.....||+++.+.
T Consensus 2 ~rI~vl~SG~g---~~~~~~l~~l~~~-~~~~~i~~Vvs~~~~~~~~~~A~~~gIp~~~~~ 58 (216)
T 2ywr_A 2 LKIGVLVSGRG---SNLQAIIDAIESG-KVNASIELVISDNPKAYAIERCKKHNVECKVIQ 58 (216)
T ss_dssp EEEEEEECSCC---HHHHHHHHHHHTT-SSCEEEEEEEESCTTCHHHHHHHHHTCCEEECC
T ss_pred CEEEEEEeCCc---HHHHHHHHHHHhC-CCCCeEEEEEeCCCChHHHHHHHHcCCCEEEeC
Confidence 45666655532 3344445566664 67 554 4443322222334455689888876
No 78
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=43.13 E-value=1.6e+02 Score=28.41 Aligned_cols=39 Identities=13% Similarity=0.245 Sum_probs=21.0
Q ss_pred CCCc-ceEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCC
Q 014316 1 MGRR-GRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSK 45 (427)
Q Consensus 1 ~~~~-~~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~ 45 (427)
|.++ |+++|+.-+ ........+..+ .|++|.+++...+.
T Consensus 1 M~~~~k~l~Il~~~-----~~~~~i~~aa~~-lG~~vv~v~~~~~~ 40 (425)
T 3vot_A 1 MTKRNKNLAIICQN-----KHLPFIFEEAER-LGLKVTFFYNSAED 40 (425)
T ss_dssp -CCCCCEEEEECCC-----TTCCHHHHHHHH-TTCEEEEEEETTSC
T ss_pred CCCCCcEEEEECCC-----hhHHHHHHHHHH-CCCEEEEEECCCcc
Confidence 6666 555554322 222222344444 69999999865543
No 79
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=42.67 E-value=27 Score=31.21 Aligned_cols=40 Identities=18% Similarity=0.111 Sum_probs=29.2
Q ss_pred CCCcceEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecC
Q 014316 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYG 42 (427)
Q Consensus 1 ~~~~~~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~ 42 (427)
|.+++++.+-+.|..+- ......+..|.+. |++|+|+...
T Consensus 1 m~~~k~IllgvTGaiaa-~k~~~ll~~L~~~-g~eV~vv~T~ 40 (209)
T 3zqu_A 1 MSGPERITLAMTGASGA-QYGLRLLDCLVQE-EREVHFLISK 40 (209)
T ss_dssp CCSCSEEEEEECSSSCH-HHHHHHHHHHHHT-TCEEEEEECH
T ss_pred CCCCCEEEEEEECHHHH-HHHHHHHHHHHHC-CCEEEEEECc
Confidence 77888988888776653 3345556777775 9999999743
No 80
>1l7b_A DNA ligase; BRCT, autostructure, structural genomics, NESG, PSI, protein structure initiative, northeast structural genomics consortium; HET: DNA; NMR {Thermus thermophilus} SCOP: c.15.1.2
Probab=42.58 E-value=46 Score=25.50 Aligned_cols=65 Identities=22% Similarity=0.253 Sum_probs=46.6
Q ss_pred CCCCEEEEEEeCCC-ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcE
Q 014316 313 LYPRLLFIITGKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPV 391 (427)
Q Consensus 313 ~~~~~~l~i~G~G~-~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PV 391 (427)
......|+|.|.=+ .+++++++++.+|- .+.+. ++ +..|++|+ .. .-+.|+-.|...|+||
T Consensus 7 ~l~G~~~v~TG~l~~~R~e~~~~i~~~Gg---~v~~s-Vs--------kkt~~LV~----g~--~~gsK~~kA~~lgI~I 68 (92)
T 1l7b_A 7 ALKGLTFVITGELSRPREEVKALLRRLGA---KVTDS-VS--------RKTSYLVV----GE--NPGSKLEKARALGVPT 68 (92)
T ss_dssp SSTTCEEECSTTTTSCHHHHHHHHHHTTC---EEESC-CS--------SSCCCBEE----CS--SSSTTHHHHHCSSSCC
T ss_pred CcCCcEEEEecCCCCCHHHHHHHHHHcCC---EEeCc-cc--------CCeeEEEe----CC--CCChHHHHHHHcCCcE
Confidence 35678899999532 78899999999873 23344 33 46677776 32 2457999999999999
Q ss_pred EEec
Q 014316 392 CAVS 395 (427)
Q Consensus 392 Ias~ 395 (427)
|.-+
T Consensus 69 i~E~ 72 (92)
T 1l7b_A 69 LTEE 72 (92)
T ss_dssp EEHH
T ss_pred EeHH
Confidence 9743
No 81
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=40.92 E-value=87 Score=29.86 Aligned_cols=84 Identities=13% Similarity=0.034 Sum_probs=59.1
Q ss_pred CEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCC---------CCcccHHHHHhcCcEEEe--eccCCCCCCCchHHHHH
Q 014316 316 RLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMW---------LSAEDYPLLLGSADLGVC--LHTSSSGLDLPMKVVDM 384 (427)
Q Consensus 316 ~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~---------~~~~~~~~~l~~adi~v~--p~~~s~~e~~p~~~lEa 384 (427)
.-.+-|+|-|.--..+.+.++.+|.+ |...... +...++.++++.||+.++ |.+.....-+.-..++.
T Consensus 141 g~tvGIiG~G~IG~~va~~~~~fg~~-v~~~d~~~~~~~~~~~~~~~~l~ell~~sDivslh~Plt~~T~~li~~~~l~~ 219 (334)
T 3kb6_A 141 RLTLGVIGTGRIGSRVAMYGLAFGMK-VLCYDVVKREDLKEKGCVYTSLDELLKESDVISLHVPYTKETHHMINEERISL 219 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTCE-EEEECSSCCHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHH
T ss_pred CcEEEEECcchHHHHHHHhhcccCce-eeecCCccchhhhhcCceecCHHHHHhhCCEEEEcCCCChhhccCcCHHHHhh
Confidence 45788999997667777777877753 4443321 112467889999999976 32323334577799999
Q ss_pred HcCCCcEEEeccCccc
Q 014316 385 FGCGLPVCAVSYSCIE 400 (427)
Q Consensus 385 ma~G~PVIas~~~g~~ 400 (427)
|--|.-+|-+.-|++-
T Consensus 220 mk~~a~lIN~aRG~iV 235 (334)
T 3kb6_A 220 MKDGVYLINTARGKVV 235 (334)
T ss_dssp SCTTEEEEECSCGGGB
T ss_pred cCCCeEEEecCccccc
Confidence 9999999999888753
No 82
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=40.59 E-value=1.2e+02 Score=27.43 Aligned_cols=18 Identities=17% Similarity=0.248 Sum_probs=13.1
Q ss_pred HHHHHHhhCCCcEEEEecC
Q 014316 24 QALSLARQMSLEVDVVAYG 42 (427)
Q Consensus 24 ~a~~La~~~g~~V~vi~~~ 42 (427)
....++++ |++|++++..
T Consensus 23 tia~~~~~-G~~V~vv~lT 40 (242)
T 2ixd_A 23 TIAKYTKQ-GYEVGICDLT 40 (242)
T ss_dssp HHHHHHHT-TCCEEEEEEE
T ss_pred HHHHHHHC-CCeEEEEEEc
Confidence 33566675 9999999854
No 83
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=40.56 E-value=25 Score=32.70 Aligned_cols=77 Identities=10% Similarity=0.065 Sum_probs=49.7
Q ss_pred CEEEEEEe-CCCChHHHHHHHHHcCCCcEEEecCCCC-----------------------cccHHHHHhcCcEEEeeccC
Q 014316 316 RLLFIITG-KGPDKESYEEKIRRLRLKRVAFRTMWLS-----------------------AEDYPLLLGSADLGVCLHTS 371 (427)
Q Consensus 316 ~~~l~i~G-~G~~~~~~~~~~~~l~l~~V~f~g~~~~-----------------------~~~~~~~l~~adi~v~p~~~ 371 (427)
.+++.|+| .|..-..+.+.+.+. +++.+.+. ++ .+++.+++..+|+++-.
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~--~~~eLv~~-~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDf--- 80 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAA--PDATLVGA-LDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDF--- 80 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHC--TTEEEEEE-BCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEEC---
T ss_pred ccEEEEECCCCHHHHHHHHHHHhC--CCCEEEEE-EEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEc---
Confidence 47889999 776555655555543 24444443 22 25778889999999863
Q ss_pred CCCCCCchHHHHHHcCCCcEEEeccCc
Q 014316 372 SSGLDLPMKVVDMFGCGLPVCAVSYSC 398 (427)
Q Consensus 372 s~~e~~p~~~lEama~G~PVIas~~~g 398 (427)
+..+....-+-.+...|+|+|....|-
T Consensus 81 T~p~a~~~~~~~al~~G~~vVigTTG~ 107 (272)
T 4f3y_A 81 TLPEGTLVHLDAALRHDVKLVIGTTGF 107 (272)
T ss_dssp SCHHHHHHHHHHHHHHTCEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 222223334567889999999877664
No 84
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=40.28 E-value=32 Score=31.86 Aligned_cols=41 Identities=27% Similarity=0.228 Sum_probs=27.4
Q ss_pred CcceEEEEEeCCCC-CChhHHHHHHHHHhhCCCcEEEEecCCCC
Q 014316 3 RRGRACVVVLGDLG-RSPRMQYQALSLARQMSLEVDVVAYGGSK 45 (427)
Q Consensus 3 ~~~~~~v~~~~~~~-~~~r~~~~a~~La~~~g~~V~vi~~~~~~ 45 (427)
+++++.|++..|=| .++++..++.+|.+ +++|+|+++..++
T Consensus 8 ~~~~m~ILlTNDDGi~apGi~aL~~~l~~--~~~V~VVAP~~~~ 49 (261)
T 3ty2_A 8 ATPKLRLLLSNDDGVYAKGLAILAKTLAD--LGEVDVVAPDRNR 49 (261)
T ss_dssp ---CCEEEEECSSCTTCHHHHHHHHHHTT--TSEEEEEEESSCC
T ss_pred cCCCCeEEEEcCCCCCCHHHHHHHHHHHh--cCCEEEEecCCCC
Confidence 34445555555555 67888888888766 6899999987543
No 85
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=40.03 E-value=70 Score=31.37 Aligned_cols=76 Identities=18% Similarity=0.140 Sum_probs=52.8
Q ss_pred CCCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCC----CC----------------------cccHHHHHhcCcEEE
Q 014316 313 LYPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMW----LS----------------------AEDYPLLLGSADLGV 366 (427)
Q Consensus 313 ~~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~----~~----------------------~~~~~~~l~~adi~v 366 (427)
+..+.++++.|.|.--...-+++..+|.++|.+.... .. ..++.+.+..+|+++
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~ADVlI 268 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGADFFI 268 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCSEEE
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCCEEE
Confidence 3678999999999766666677777888788777642 11 234889999999999
Q ss_pred eeccCCCCCCCchHHHHHHcCCCcEE
Q 014316 367 CLHTSSSGLDLPMKVVDMFGCGLPVC 392 (427)
Q Consensus 367 ~p~~~s~~e~~p~~~lEama~G~PVI 392 (427)
-. |..--|.--+++.|+- .|||
T Consensus 269 G~---Sap~l~t~emVk~Ma~-~pII 290 (388)
T 1vl6_A 269 GV---SRGNILKPEWIKKMSR-KPVI 290 (388)
T ss_dssp EC---SCSSCSCHHHHTTSCS-SCEE
T ss_pred Ee---CCCCccCHHHHHhcCC-CCEE
Confidence 74 2234455567777763 4544
No 86
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=37.37 E-value=75 Score=28.23 Aligned_cols=56 Identities=16% Similarity=0.141 Sum_probs=29.1
Q ss_pred cceEEEEEeCCCCCChhHHHHHHHHHhh-CCCcEEEEecC-CCCCcccccCCCceEEEEee
Q 014316 4 RGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYG-GSKPHAAILEHPSIHIHTMT 62 (427)
Q Consensus 4 ~~~~~v~~~~~~~~~~r~~~~a~~La~~-~g~~V~vi~~~-~~~~~~~~~~~~~i~v~~~~ 62 (427)
+++++|++.|.- ..++....++.+. ..++|..+... .+....+.....||+++.++
T Consensus 7 ~~ri~vl~SG~g---snl~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~~ 64 (209)
T 4ds3_A 7 RNRVVIFISGGG---SNMEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVFK 64 (209)
T ss_dssp CEEEEEEESSCC---HHHHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEECC
T ss_pred CccEEEEEECCc---HHHHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEeC
Confidence 356777666532 3344444444442 12466555443 22222334556699999887
No 87
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=36.47 E-value=1.3e+02 Score=25.76 Aligned_cols=70 Identities=10% Similarity=0.045 Sum_probs=41.5
Q ss_pred CCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCc---EEEeeccCCCC--CCCchHHHHHHcCCCcEEEec
Q 014316 324 KGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSAD---LGVCLHTSSSG--LDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 324 ~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~ad---i~v~p~~~s~~--e~~p~~~lEama~G~PVIas~ 395 (427)
.+.....+.+.++++|.+ +.......+.+++.+.+...| ++++| .++.. .++-..+++++..|+|+++.-
T Consensus 9 ~~s~~~~i~~~l~~~G~~-~~v~~~~~~~~~i~~~l~~~~~~~iil~g-Gpg~~~~~~~~~~l~~~~~~~~PilGIC 83 (192)
T 1i1q_B 9 IDSFTWNLADQLRTNGHN-VVIYRNHIPAQTLIDRLATMKNPVLMLSP-GPGVPSEAGCMPELLTRLRGKLPIIGIC 83 (192)
T ss_dssp SCSSHHHHHHHHHHTTCE-EEEEETTSCSHHHHHHHTTCSSEEEEECC-CSSCGGGSTTHHHHHHHHBTTBCEEEET
T ss_pred CccHHHHHHHHHHHCCCe-EEEEECCCCHHHHHHHhhhccCCeEEECC-CCcCchhCchHHHHHHHHhcCCCEEEEC
Confidence 344556667788888864 333332134466666655444 55554 22221 344456888889999999863
No 88
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=35.07 E-value=2.1e+02 Score=26.54 Aligned_cols=57 Identities=11% Similarity=0.023 Sum_probs=30.2
Q ss_pred CcceEEEEEeCCCCCChhHHHHHHHHHhh-CCCcEEEEecCCCCCcccccCCCceEEEEee
Q 014316 3 RRGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62 (427)
Q Consensus 3 ~~~~~~v~~~~~~~~~~r~~~~a~~La~~-~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~ 62 (427)
+++|++|++.+.. ..++......... ...+|.++.........+.....||+++.+|
T Consensus 87 ~~~ri~vl~Sg~g---~nl~~ll~~~~~g~l~~~i~~Visn~~~a~~~~A~~~gIp~~~~~ 144 (287)
T 3nrb_A 87 DRKKVVIMVSKFD---HCLGDLLYRHRLGELDMEVVGIISNHPREALSVSLVGDIPFHYLP 144 (287)
T ss_dssp CCCEEEEEECSCC---HHHHHHHHHHHHTSSCCEEEEEEESSCGGGCCCCCCTTSCEEECC
T ss_pred CCcEEEEEEeCCC---cCHHHHHHHHHCCCCCeEEEEEEeCChHHHHHHHHHcCCCEEEEe
Confidence 4677888776642 2333333333332 1245555544332212344567799999987
No 89
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=34.97 E-value=1.1e+02 Score=24.27 Aligned_cols=105 Identities=11% Similarity=0.017 Sum_probs=60.7
Q ss_pred CEEEEEEeCCCC-hHHHHHHHHHc-CCCcEEEecCCCCcccHHHHHhc---CcEEEeeccCCCCCCCchHHHHHHc---C
Q 014316 316 RLLFIITGKGPD-KESYEEKIRRL-RLKRVAFRTMWLSAEDYPLLLGS---ADLGVCLHTSSSGLDLPMKVVDMFG---C 387 (427)
Q Consensus 316 ~~~l~i~G~G~~-~~~~~~~~~~l-~l~~V~f~g~~~~~~~~~~~l~~---adi~v~p~~~s~~e~~p~~~lEama---~ 387 (427)
..+++|+.+.+. ...+++..++. |...|..... .++....+.. .|++++= ......-+..+++.+. .
T Consensus 3 ~~~iLivdd~~~~~~~l~~~L~~~~g~~~v~~~~~---~~~a~~~l~~~~~~dlvi~d--~~l~~~~g~~~~~~l~~~~~ 77 (154)
T 2qsj_A 3 LTVVLIVDDHHLIRAGAKNLLEGAFSGMRVEGAET---VSDALAFLEADNTVDLILLD--VNLPDAEAIDGLVRLKRFDP 77 (154)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHHHCTTEEEEEESS---HHHHHHHHHTTCCCSEEEEC--C------CHHHHHHHHHHCT
T ss_pred ccEEEEEcCCHHHHHHHHHHHHhCCCceEEEEecC---HHHHHHHHhccCCCCEEEEe--CCCCCCchHHHHHHHHHhCC
Confidence 367788876543 34566666766 5545555443 6777777755 6888762 1111223445555543 4
Q ss_pred CCcEEEeccC----ccccceecCCcEEEeC--ChHHHHHHHHHh
Q 014316 388 GLPVCAVSYS----CIEELVKVDKNGLLFS--SSSELADQLLVN 425 (427)
Q Consensus 388 G~PVIas~~~----g~~e~v~~~~~G~l~~--~~~~la~~l~~~ 425 (427)
++|||..... ...+.+..|..|++.. +.++|.+.|...
T Consensus 78 ~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~~l~~~ 121 (154)
T 2qsj_A 78 SNAVALISGETDHELIRAALEAGADGFIPKSADPQVLIHAVSLI 121 (154)
T ss_dssp TSEEEEC-----CHHHHHHHHTTCCBBCCTTSCHHHHHHHHHHH
T ss_pred CCeEEEEeCCCCHHHHHHHHHccCCEEEeCCCCHHHHHHHHHHH
Confidence 7888865422 2344556677888883 568888888764
No 90
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=34.65 E-value=1.1e+02 Score=29.13 Aligned_cols=28 Identities=18% Similarity=0.201 Sum_probs=19.7
Q ss_pred CCCChhHHHHHHHHHhhCCCcEEEEecCC
Q 014316 15 LGRSPRMQYQALSLARQMSLEVDVVAYGG 43 (427)
Q Consensus 15 ~~~~~r~~~~a~~La~~~g~~V~vi~~~~ 43 (427)
.|.+.-....|..++++ |..|.++..+.
T Consensus 27 vGKTt~a~~lA~~la~~-g~~vllid~D~ 54 (334)
T 3iqw_A 27 VGKTTTSCSLAIQLAKV-RRSVLLLSTDP 54 (334)
T ss_dssp SSHHHHHHHHHHHHTTS-SSCEEEEECCS
T ss_pred ccHHHHHHHHHHHHHhC-CCcEEEEECCC
Confidence 33333456677888886 99999998653
No 91
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=34.58 E-value=67 Score=27.92 Aligned_cols=58 Identities=14% Similarity=0.240 Sum_probs=33.2
Q ss_pred cceEEEEEeCCCCCChhHH-HHHHHHHhhCCCcEEEEecCCCCCc---ccccC----CCceEEEEee
Q 014316 4 RGRACVVVLGDLGRSPRMQ-YQALSLARQMSLEVDVVAYGGSKPH---AAILE----HPSIHIHTMT 62 (427)
Q Consensus 4 ~~~~~v~~~~~~~~~~r~~-~~a~~La~~~g~~V~vi~~~~~~~~---~~~~~----~~~i~v~~~~ 62 (427)
++|+.|++.+++...+.-. ..+..+.+ .|+.|++++.+..... ....+ .++-++.++|
T Consensus 106 ~~riiil~~~~~~~~~~~~~~~a~~lk~-~gi~v~~Ig~G~~~~~~~l~~la~~~n~~~~s~~~~~~ 171 (192)
T 2x5n_A 106 RQRIVAFVGSPIVEDEKNLIRLAKRMKK-NNVAIDIIHIGELQNESALQHFIDAANSSDSCHLVSIP 171 (192)
T ss_dssp EEEEEEEECSCCSSCHHHHHHHHHHHHH-TTEEEEEEEESCC---CHHHHHHHHHCSTTCCEEEEEC
T ss_pred CceEEEEEECCCCCCchhHHHHHHHHHH-CCCEEEEEEeCCCCccHHHHHHHHhccCCCceEEEEec
Confidence 3466666767665444433 34445555 5999999998754322 12111 2567888887
No 92
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=33.86 E-value=2e+02 Score=26.72 Aligned_cols=56 Identities=5% Similarity=-0.012 Sum_probs=29.5
Q ss_pred CcceEEEEEeCCCCCChhHHHHHHHHHhh-CCCcEEEEecCC-CCCcccccCCCceEEEEee
Q 014316 3 RRGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGG-SKPHAAILEHPSIHIHTMT 62 (427)
Q Consensus 3 ~~~~~~v~~~~~~~~~~r~~~~a~~La~~-~g~~V~vi~~~~-~~~~~~~~~~~~i~v~~~~ 62 (427)
+++|+.|++.+.. ..++......... ...+|.++.... .. ..+.....||+++.+|
T Consensus 88 ~~~ri~vl~Sg~g---~nl~~ll~~~~~g~l~~~i~~Visn~p~~-~~~~A~~~gIp~~~~~ 145 (288)
T 3obi_A 88 TRRKVMLLVSQSD---HCLADILYRWRVGDLHMIPTAIVSNHPRE-TFSGFDFGDIPFYHFP 145 (288)
T ss_dssp SCEEEEEEECSCC---HHHHHHHHHHHTTSSCEEEEEEEESSCGG-GSCCTTTTTCCEEECC
T ss_pred CCcEEEEEEcCCC---CCHHHHHHHHHCCCCCeEEEEEEcCCChh-HHHHHHHcCCCEEEeC
Confidence 4667877776632 2333333333332 123555444433 22 3345667799999988
No 93
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=33.22 E-value=1.8e+02 Score=22.94 Aligned_cols=115 Identities=17% Similarity=0.050 Sum_probs=58.5
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhhCC
Q 014316 22 QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIAS 101 (427)
Q Consensus 22 ~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (427)
...+..|.++ |++|.++....+. .+.....+++++... .. ....+ .+ ....+
T Consensus 19 ~~la~~L~~~-g~~V~~id~~~~~--~~~~~~~~~~~~~gd--~~-------~~~~l-------~~---------~~~~~ 70 (141)
T 3llv_A 19 VGLVRELTAA-GKKVLAVDKSKEK--IELLEDEGFDAVIAD--PT-------DESFY-------RS---------LDLEG 70 (141)
T ss_dssp HHHHHHHHHT-TCCEEEEESCHHH--HHHHHHTTCEEEECC--TT-------CHHHH-------HH---------SCCTT
T ss_pred HHHHHHHHHC-CCeEEEEECCHHH--HHHHHHCCCcEEECC--CC-------CHHHH-------Hh---------CCccc
Confidence 3456778886 9999999754322 111222366555443 11 11111 11 01257
Q ss_pred CcEEEEcCCCChhHHHHHHHHHhhcCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHHHH
Q 014316 102 PDVFLVQNPPSVPTLVAVKWASSLRRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181 (427)
Q Consensus 102 ~Dvv~~~~p~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l 181 (427)
.|++++..+..-....++..+......+++...++..+ ...++ .--+|.++...+.....+
T Consensus 71 ~d~vi~~~~~~~~n~~~~~~a~~~~~~~iia~~~~~~~----------------~~~l~---~~G~~~vi~p~~~~~~~l 131 (141)
T 3llv_A 71 VSAVLITGSDDEFNLKILKALRSVSDVYAIVRVSSPKK----------------KEEFE---EAGANLVVLVADAVKQAF 131 (141)
T ss_dssp CSEEEECCSCHHHHHHHHHHHHHHCCCCEEEEESCGGG----------------HHHHH---HTTCSEEEEHHHHHHHHH
T ss_pred CCEEEEecCCHHHHHHHHHHHHHhCCceEEEEEcChhH----------------HHHHH---HcCCCEEECHHHHHHHHH
Confidence 99988877533333333344444444456665554421 01111 113788888877777666
Q ss_pred HH
Q 014316 182 AQ 183 (427)
Q Consensus 182 ~~ 183 (427)
.+
T Consensus 132 ~~ 133 (141)
T 3llv_A 132 MD 133 (141)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 94
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=33.03 E-value=1.7e+02 Score=22.54 Aligned_cols=104 Identities=13% Similarity=0.035 Sum_probs=62.2
Q ss_pred CEEEEEEeCCCC-hHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhc--CcEEEeeccCCCCCCCchHHHHHHcC-----
Q 014316 316 RLLFIITGKGPD-KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS--ADLGVCLHTSSSGLDLPMKVVDMFGC----- 387 (427)
Q Consensus 316 ~~~l~i~G~G~~-~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~--adi~v~p~~~s~~e~~p~~~lEama~----- 387 (427)
..+++|+.+.+. ...+++..++.|.. |.... +.++....+.. .|++++ .......-|..+++.+..
T Consensus 6 ~~~iLivdd~~~~~~~l~~~l~~~g~~-v~~~~---~~~~a~~~l~~~~~dlvi~--d~~l~~~~g~~~~~~l~~~~~~~ 79 (140)
T 3grc_A 6 RPRILICEDDPDIARLLNLMLEKGGFD-SDMVH---SAAQALEQVARRPYAAMTV--DLNLPDQDGVSLIRALRRDSRTR 79 (140)
T ss_dssp CSEEEEECSCHHHHHHHHHHHHHTTCE-EEEEC---SHHHHHHHHHHSCCSEEEE--CSCCSSSCHHHHHHHHHTSGGGT
T ss_pred CCCEEEEcCCHHHHHHHHHHHHHCCCe-EEEEC---CHHHHHHHHHhCCCCEEEE--eCCCCCCCHHHHHHHHHhCcccC
Confidence 356777776543 34566667766654 44433 25555555543 577776 112223445677776654
Q ss_pred CCcEEEeccCc----cc-cceecCCcEEEeC--ChHHHHHHHHHh
Q 014316 388 GLPVCAVSYSC----IE-ELVKVDKNGLLFS--SSSELADQLLVN 425 (427)
Q Consensus 388 G~PVIas~~~g----~~-e~v~~~~~G~l~~--~~~~la~~l~~~ 425 (427)
.+|||...... .. +.++.|..+++.. +.++|.++|...
T Consensus 80 ~~~ii~~s~~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~ 124 (140)
T 3grc_A 80 DLAIVVVSANAREGELEFNSQPLAVSTWLEKPIDENLLILSLHRA 124 (140)
T ss_dssp TCEEEEECTTHHHHHHHHCCTTTCCCEEECSSCCHHHHHHHHHHH
T ss_pred CCCEEEEecCCChHHHHHHhhhcCCCEEEeCCCCHHHHHHHHHHH
Confidence 77888654322 22 5566778889883 568888887764
No 95
>1xv5_A AGT, DNA alpha-glucosyltransferase; HET: DNA CME UDP; 1.73A {Enterobacteria phage T4} PDB: 1y6f_A* 1y6g_A* 1ya6_A* 1y8z_A*
Probab=32.88 E-value=2.7e+02 Score=24.92 Aligned_cols=74 Identities=12% Similarity=0.158 Sum_probs=42.4
Q ss_pred cccHHHHHhcCcEEEeeccCC---CCCCCchHHHHHHcCCC-cEEEeccCcccc------ceecCCcEEEe---CChHHH
Q 014316 352 AEDYPLLLGSADLGVCLHTSS---SGLDLPMKVVDMFGCGL-PVCAVSYSCIEE------LVKVDKNGLLF---SSSSEL 418 (427)
Q Consensus 352 ~~~~~~~l~~adi~v~p~~~s---~~e~~p~~~lEama~G~-PVIas~~~g~~e------~v~~~~~G~l~---~~~~~l 418 (427)
..++.+-++.+-.+--+.... ....+-.+-+|--|||. ||.--..|..-. -+...+.|++- +|.++-
T Consensus 278 nsemlermsksgfgyqlsklnqkylqrsleythlelgacgtipvfwkstgenlkfrvdntpltshdsgiiwfdendmest 357 (401)
T 1xv5_A 278 NSEMLERMSKSGFGYQLSKLNQKYLQRSLEYTHLELGACGTIPVFWKSTGENLKFRVDNTPLTSHDSGIIWFDENDMEST 357 (401)
T ss_dssp HHHHHHHHHTEEEEEECCCCCGGGCSSCCCHHHHHHHHHTSEEEEEHHHHHHSBCTTTCCBGGGSCCSCEEECTTCHHHH
T ss_pred cHHHHHHhhhcCcccchHHHHHHHHHhhhhhheeecccccceeeeecccCcceEEEecCCcccccCCceEEecCCchHHH
Confidence 456777788877776542111 11456678999999998 655443433211 12334567665 445655
Q ss_pred HHHHHHh
Q 014316 419 ADQLLVN 425 (427)
Q Consensus 419 a~~l~~~ 425 (427)
-+.|.++
T Consensus 358 ferikel 364 (401)
T 1xv5_A 358 FERIKEL 364 (401)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 5555554
No 96
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=31.98 E-value=1.3e+02 Score=25.28 Aligned_cols=37 Identities=22% Similarity=0.232 Sum_probs=24.4
Q ss_pred HHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe
Q 014316 357 LLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 394 (427)
Q Consensus 357 ~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas 394 (427)
+.+..||++|.-.. ....|...-+-=|.|.|+||++-
T Consensus 64 ~~i~~aD~vvA~l~-~~d~Gt~~EiG~A~algkPV~~l 100 (152)
T 4fyk_A 64 NWLQQADVVVAEVT-QPSLGVGYELGRAVALGKPILCL 100 (152)
T ss_dssp HHHHHCSEEEEECS-SCCHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHCCEEEEeCC-CCCCCHHHHHHHHHHcCCeEEEE
Confidence 56899999987422 22223333444478999999994
No 97
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=31.63 E-value=2.8e+02 Score=25.37 Aligned_cols=96 Identities=9% Similarity=0.089 Sum_probs=56.2
Q ss_pred EEEEEEeCCCCh--HHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeec-cCC-CC--CCCchHHHHHHc----
Q 014316 317 LLFIITGKGPDK--ESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLH-TSS-SG--LDLPMKVVDMFG---- 386 (427)
Q Consensus 317 ~~l~i~G~G~~~--~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~-~~s-~~--e~~p~~~lEama---- 386 (427)
+.-+|+.|-|.+ +++.+.+++.|++.+.+...--+.+.+..+.+.++=+|... ... .+ .+++..+.|.+.
T Consensus 124 vdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~ 203 (267)
T 3vnd_A 124 VDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAE 203 (267)
T ss_dssp CCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHT
T ss_pred CCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHH
Confidence 555666776543 56778889999987767665234578888888887333321 111 11 234433444433
Q ss_pred -CCCcEEEeccCccc------cceecCCcEEEeCC
Q 014316 387 -CGLPVCAVSYSCIE------ELVKVDKNGLLFSS 414 (427)
Q Consensus 387 -~G~PVIas~~~g~~------e~v~~~~~G~l~~~ 414 (427)
..+||+.- +|++ +.+..+-+|+++++
T Consensus 204 ~~~~pv~vG--fGI~~~e~~~~~~~~gADgvVVGS 236 (267)
T 3vnd_A 204 FNAPPPLLG--FGIAEPEQVRAAIKAGAAGAISGS 236 (267)
T ss_dssp TTCCCEEEC--SSCCSHHHHHHHHHTTCSEEEECH
T ss_pred hcCCCEEEE--CCcCCHHHHHHHHHcCCCEEEECH
Confidence 47898873 3332 25667889999965
No 98
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=31.31 E-value=1.9e+02 Score=22.68 Aligned_cols=105 Identities=12% Similarity=0.062 Sum_probs=65.7
Q ss_pred EEEEEEeCCCC-hHHHHHHHHHcCCC-cEEEecCCCCcccHHHHHh-----------cCcEEEeeccCCCCCCCchHHHH
Q 014316 317 LLFIITGKGPD-KESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLG-----------SADLGVCLHTSSSGLDLPMKVVD 383 (427)
Q Consensus 317 ~~l~i~G~G~~-~~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~-----------~adi~v~p~~~s~~e~~p~~~lE 383 (427)
.+++|+.+.+. ...+++..++.|.. .|..... .++..+.+. ..|++++= ......-|..+++
T Consensus 5 ~~ILivddd~~~~~~l~~~L~~~g~~~~v~~~~~---~~~al~~l~~~~~~~~~~~~~~dliilD--~~l~~~~g~~~~~ 79 (152)
T 3heb_A 5 VTIVMIEDDLGHARLIEKNIRRAGVNNEIIAFTD---GTSALNYLFGDDKSGRVSAGRAQLVLLD--LNLPDMTGIDILK 79 (152)
T ss_dssp CEEEEECCCHHHHHHHHHHHHHTTCCCCEEEESS---HHHHHHHHHCTTSSSGGGTTCBEEEEEC--SBCSSSBHHHHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHhCCCcceEEEeCC---HHHHHHHHhccccccccccCCCCEEEEe--CCCCCCcHHHHHH
Confidence 56777776543 35667777777764 5655443 666666663 46777761 1222344556777
Q ss_pred HHcC-----CCcEEEeccCc----cccceecCCcEEEeC--ChHHHHHHHHHhc
Q 014316 384 MFGC-----GLPVCAVSYSC----IEELVKVDKNGLLFS--SSSELADQLLVNA 426 (427)
Q Consensus 384 ama~-----G~PVIas~~~g----~~e~v~~~~~G~l~~--~~~~la~~l~~~~ 426 (427)
.+.. ++|||...... ..+.++.|..+++.. +.++|.++|.+++
T Consensus 80 ~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~ 133 (152)
T 3heb_A 80 LVKENPHTRRSPVVILTTTDDQREIQRCYDLGANVYITKPVNYENFANAIRQLG 133 (152)
T ss_dssp HHHHSTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHH
T ss_pred HHHhcccccCCCEEEEecCCCHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHHHH
Confidence 6543 67887654222 344566788899984 5688888887764
No 99
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=30.94 E-value=37 Score=31.93 Aligned_cols=77 Identities=13% Similarity=0.031 Sum_probs=49.0
Q ss_pred CEEEEEEe-CCCChHHHHHHHHHcCCCcEEEecCCCCc------------------------ccHHHHHhcCcEEEeecc
Q 014316 316 RLLFIITG-KGPDKESYEEKIRRLRLKRVAFRTMWLSA------------------------EDYPLLLGSADLGVCLHT 370 (427)
Q Consensus 316 ~~~l~i~G-~G~~~~~~~~~~~~l~l~~V~f~g~~~~~------------------------~~~~~~l~~adi~v~p~~ 370 (427)
.+++.++| .|..-..+.+.+.+. +++.+.|. +++ +++.+++..+|+.|-.
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~--~~~eLvg~-vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDF-- 95 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRR--KDVELCAV-LVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDF-- 95 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTC--SSEEEEEE-BCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEEC--
T ss_pred CeEEEEECCCCHHHHHHHHHHHhC--CCCEEEEE-EecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEc--
Confidence 38899999 786555555555432 34555554 322 3678889999999853
Q ss_pred CCCCCCCchHHHHHHcCCCcEEEeccCc
Q 014316 371 SSSGLDLPMKVVDMFGCGLPVCAVSYSC 398 (427)
Q Consensus 371 ~s~~e~~p~~~lEama~G~PVIas~~~g 398 (427)
+..+..---+..+...|+|+|....|-
T Consensus 96 -T~p~a~~~~~~~~l~~Gv~vViGTTG~ 122 (288)
T 3ijp_A 96 -SQPQASVLYANYAAQKSLIHIIGTTGF 122 (288)
T ss_dssp -SCHHHHHHHHHHHHHHTCEEEECCCCC
T ss_pred -CCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 222222223556788999999876664
No 100
>3sqd_A PAX-interacting protein 1; tandem BRCT domains, cell cycle; HET: SEP; 2.15A {Homo sapiens}
Probab=30.68 E-value=28 Score=31.21 Aligned_cols=62 Identities=11% Similarity=0.097 Sum_probs=42.2
Q ss_pred CEEEEEEeCCC-ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe
Q 014316 316 RLLFIITGKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 394 (427)
Q Consensus 316 ~~~l~i~G~G~-~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas 394 (427)
..++.+.|-.+ ..+.+.+.++.+|- . +.. + ...++-+|++ ... -..|++.|++.|+|||..
T Consensus 16 ~~~i~~SG~~~~~~~~l~~~i~~lGg-------~-v~~-~----~~~~THLI~~---~~~--rT~K~l~A~~~g~~IVs~ 77 (219)
T 3sqd_A 16 TPFVLFTGFEPVQVQQYIKKLYILGG-------E-VAE-S----AQKCTHLIAS---KVT--RTVKFLTAISVVKHIVTP 77 (219)
T ss_dssp CCEEEECSCCHHHHHHHHHHHHHTTC-------E-ECS-S----GGGCSEEECS---SCC--CCHHHHHHTTTCSEEECH
T ss_pred CeEEEEeCCChHHHHHHHHHHHHCCC-------E-EeC-C----CCCceEEEEC---CCC--CCHHHHHHHHcCCCEecH
Confidence 57788888433 33567888888872 2 222 2 1678888874 221 235999999999999987
Q ss_pred c
Q 014316 395 S 395 (427)
Q Consensus 395 ~ 395 (427)
+
T Consensus 78 ~ 78 (219)
T 3sqd_A 78 E 78 (219)
T ss_dssp H
T ss_pred H
Confidence 5
No 101
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=30.29 E-value=1.3e+02 Score=28.18 Aligned_cols=69 Identities=12% Similarity=0.133 Sum_probs=45.9
Q ss_pred HHHHHHHHHcCCCcEEEecCC----CCcccHHHHHhcCcEEEeeccCC-------CCCCCchHHHHHHcCC-CcEEEecc
Q 014316 329 ESYEEKIRRLRLKRVAFRTMW----LSAEDYPLLLGSADLGVCLHTSS-------SGLDLPMKVVDMFGCG-LPVCAVSY 396 (427)
Q Consensus 329 ~~~~~~~~~l~l~~V~f~g~~----~~~~~~~~~l~~adi~v~p~~~s-------~~e~~p~~~lEama~G-~PVIas~~ 396 (427)
+.+.+..+++|.++|..+-.. .+.+++.+.+..||+.++.-..+ ...++-..+-|+...| +|++.++.
T Consensus 74 ~~~~~~f~~lG~~~v~~L~i~~r~~a~~~~~~~~l~~ad~I~v~GGnt~~l~~~l~~t~l~~~L~~~~~~G~~~~~GtSA 153 (291)
T 3en0_A 74 ERYQTIFSDMGVKELKVLDIRDRAQGDDSGYRLFVEQCTGIFMTGGDQLRLCGLLADTPLMDRIRQRVHNGEISLAGTSA 153 (291)
T ss_dssp HHHHHHHHHHCCSEEEECCCCSGGGGGCHHHHHHHHHCSEEEECCSCHHHHHHHHTTCHHHHHHHHHHHTTSSEEEEETH
T ss_pred HHHHHHHHHcCCCeeEEEEecCccccCCHHHHHHHhcCCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCCeEEEEeCH
Confidence 456677788898777666430 12346678899999998741111 1133444678888999 99999886
Q ss_pred C
Q 014316 397 S 397 (427)
Q Consensus 397 ~ 397 (427)
|
T Consensus 154 G 154 (291)
T 3en0_A 154 G 154 (291)
T ss_dssp H
T ss_pred H
Confidence 5
No 102
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=30.26 E-value=1.5e+02 Score=27.96 Aligned_cols=83 Identities=8% Similarity=0.034 Sum_probs=54.5
Q ss_pred CEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCC--------CcccHHHHHhcCcEEEeec--cCCCCCCCchHHHHHH
Q 014316 316 RLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWL--------SAEDYPLLLGSADLGVCLH--TSSSGLDLPMKVVDMF 385 (427)
Q Consensus 316 ~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~--------~~~~~~~~l~~adi~v~p~--~~s~~e~~p~~~lEam 385 (427)
.-++-|+|-|.--..+.+.++.+|. +|....... ...++.++++.||++++.. +.....-+....++.|
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~m 224 (331)
T 1xdw_A 146 NCTVGVVGLGRIGRVAAQIFHGMGA-TVIGEDVFEIKGIEDYCTQVSLDEVLEKSDIITIHAPYIKENGAVVTRDFLKKM 224 (331)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCCSCTTTCEECCHHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCccHHHHhccccCCHHHHHhhCCEEEEecCCchHHHHHhCHHHHhhC
Confidence 4578899998766667777777775 354444211 1236789999999998721 1112233455788999
Q ss_pred cCCCcEEEeccCcc
Q 014316 386 GCGLPVCAVSYSCI 399 (427)
Q Consensus 386 a~G~PVIas~~~g~ 399 (427)
.-|.-+|-+..|++
T Consensus 225 k~ga~lin~srg~~ 238 (331)
T 1xdw_A 225 KDGAILVNCARGQL 238 (331)
T ss_dssp CTTEEEEECSCGGG
T ss_pred CCCcEEEECCCccc
Confidence 88888887776654
No 103
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=29.55 E-value=2.1e+02 Score=26.62 Aligned_cols=56 Identities=5% Similarity=0.059 Sum_probs=30.6
Q ss_pred CcceEEEEEeCCCCCChhHHHHHHHHHhh-CCCcEEEEecCCCCCcccccCCCceEEEEee
Q 014316 3 RRGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62 (427)
Q Consensus 3 ~~~~~~v~~~~~~~~~~r~~~~a~~La~~-~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~ 62 (427)
+++|++|++.+.. ..++......... ...+|.++...... ........||+++.+|
T Consensus 94 ~~~ri~vl~Sg~g---~~l~~ll~~~~~g~l~~~i~~Visn~~~-~~~~A~~~gIp~~~~~ 150 (292)
T 3lou_A 94 ARPKVLIMVSKLE---HCLADLLFRWKMGELKMDIVGIVSNHPD-FAPLAAQHGLPFRHFP 150 (292)
T ss_dssp SCCEEEEEECSCC---HHHHHHHHHHHHTSSCCEEEEEEESSST-THHHHHHTTCCEEECC
T ss_pred CCCEEEEEEcCCC---cCHHHHHHHHHcCCCCcEEEEEEeCcHH-HHHHHHHcCCCEEEeC
Confidence 4677888776632 2333333333332 23466655544332 2344566799999988
No 104
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=29.45 E-value=1.8e+02 Score=26.96 Aligned_cols=56 Identities=9% Similarity=0.045 Sum_probs=29.9
Q ss_pred CcceEEEEEeCCCCCChhHHHHHHHHHhh-CCCcEEEEecCCCCCcccccCCCceEEEEee
Q 014316 3 RRGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62 (427)
Q Consensus 3 ~~~~~~v~~~~~~~~~~r~~~~a~~La~~-~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~ 62 (427)
+++|++|++.+.. .-++......... ...+|.++...... ........||+++.+|
T Consensus 89 ~~~ri~vl~Sg~g---~~l~~ll~~~~~g~l~~~i~~Visn~~~-~~~~A~~~gIp~~~~~ 145 (286)
T 3n0v_A 89 HRPKVVIMVSKAD---HCLNDLLYRQRIGQLGMDVVAVVSNHPD-LEPLAHWHKIPYYHFA 145 (286)
T ss_dssp CCCEEEEEESSCC---HHHHHHHHHHHTTSSCCEEEEEEESSST-THHHHHHTTCCEEECC
T ss_pred CCcEEEEEEeCCC---CCHHHHHHHHHCCCCCcEEEEEEeCcHH-HHHHHHHcCCCEEEeC
Confidence 4667877776642 2333332232222 22466655544332 2344566799999988
No 105
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=29.32 E-value=1.3e+02 Score=26.54 Aligned_cols=54 Identities=19% Similarity=0.185 Sum_probs=28.6
Q ss_pred eEEEEEeCCCCCChhHHHHHHHHHhh-CCCcEEEEecCCCC-CcccccCCCceEEEEee
Q 014316 6 RACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGSK-PHAAILEHPSIHIHTMT 62 (427)
Q Consensus 6 ~~~v~~~~~~~~~~r~~~~a~~La~~-~g~~V~vi~~~~~~-~~~~~~~~~~i~v~~~~ 62 (427)
+++|++.|... -++..+.++.+. .+++|.++....+. ...+.....||+++.+.
T Consensus 2 riaVl~SG~Gs---~L~aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~ 57 (209)
T 1meo_A 2 RVAVLISGTGS---NLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVIN 57 (209)
T ss_dssp EEEEEESSSCT---THHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECC
T ss_pred eEEEEEECCch---HHHHHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHcCCCEEEEC
Confidence 56776666332 233333333332 25787666544332 22233556699988876
No 106
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=29.29 E-value=1.5e+02 Score=28.41 Aligned_cols=85 Identities=9% Similarity=0.024 Sum_probs=53.2
Q ss_pred CCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCC-------CcccHHHHHhcCcEEEeec--cCCCCCCCchHHHHH
Q 014316 314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWL-------SAEDYPLLLGSADLGVCLH--TSSSGLDLPMKVVDM 384 (427)
Q Consensus 314 ~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~-------~~~~~~~~l~~adi~v~p~--~~s~~e~~p~~~lEa 384 (427)
...-++-|+|-|.--..+.+.++..|. +|....... ...++.++++.||++++.. +.....-+....++.
T Consensus 169 l~gktiGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~ 247 (340)
T 4dgs_A 169 PKGKRIGVLGLGQIGRALASRAEAFGM-SVRYWNRSTLSGVDWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQA 247 (340)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCTTSCCEECSSHHHHHHTCSEEEECC----------CHHHHHH
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCcccccCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhc
Confidence 345678999998766666666666664 455544311 1247889999999998721 111223455678999
Q ss_pred HcCCCcEEEeccCcc
Q 014316 385 FGCGLPVCAVSYSCI 399 (427)
Q Consensus 385 ma~G~PVIas~~~g~ 399 (427)
|--|.-+|-+..|++
T Consensus 248 mk~gailIN~aRG~v 262 (340)
T 4dgs_A 248 LGPEGIVVNVARGNV 262 (340)
T ss_dssp TTTTCEEEECSCC--
T ss_pred CCCCCEEEECCCCcc
Confidence 999988888776654
No 107
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=29.26 E-value=2e+02 Score=27.38 Aligned_cols=83 Identities=13% Similarity=0.043 Sum_probs=56.2
Q ss_pred CEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCC--------CcccHHHHHhcCcEEEee--ccCCCCCCCchHHHHHH
Q 014316 316 RLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWL--------SAEDYPLLLGSADLGVCL--HTSSSGLDLPMKVVDMF 385 (427)
Q Consensus 316 ~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~--------~~~~~~~~l~~adi~v~p--~~~s~~e~~p~~~lEam 385 (427)
.-++-|+|-|.--..+.+.++.+|. +|....... ...++.++++.||++++- .+.....-+....+..|
T Consensus 148 gktvgIiGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~m 226 (343)
T 2yq5_A 148 NLTVGLIGVGHIGSAVAEIFSAMGA-KVIAYDVAYNPEFEPFLTYTDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEM 226 (343)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCGGGTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHS
T ss_pred CCeEEEEecCHHHHHHHHHHhhCCC-EEEEECCChhhhhhccccccCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhC
Confidence 4578999998766777777777775 454443311 123678999999999872 11122244566789999
Q ss_pred cCCCcEEEeccCcc
Q 014316 386 GCGLPVCAVSYSCI 399 (427)
Q Consensus 386 a~G~PVIas~~~g~ 399 (427)
--|.-+|-+..|++
T Consensus 227 k~gailIN~aRg~~ 240 (343)
T 2yq5_A 227 KKSAYLINCARGEL 240 (343)
T ss_dssp CTTCEEEECSCGGG
T ss_pred CCCcEEEECCCChh
Confidence 99998888876664
No 108
>2cok_A Poly [ADP-ribose] polymerase-1; BRCT domain, DNA repair, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2le0_A
Probab=28.85 E-value=41 Score=26.94 Aligned_cols=67 Identities=10% Similarity=0.060 Sum_probs=46.1
Q ss_pred CCCEEEEEEeCC-CChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEE
Q 014316 314 YPRLLFIITGKG-PDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC 392 (427)
Q Consensus 314 ~~~~~l~i~G~G-~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVI 392 (427)
+.+..|+|.|.= ..+++++++++.+|- .+.+. ++ +..|++|.- ...+.-+.++-.|...|+|||
T Consensus 11 l~G~~~ViTG~l~~~R~e~k~~ie~~Gg---kv~~s-Vs--------kkT~~lV~g---~~~e~~gsKl~kA~~lgI~Iv 75 (113)
T 2cok_A 11 LSNMKILTLGKLSRNKDEVKAMIEKLGG---KLTGT-AN--------KASLCISTK---KEVEKMNKKMEEVKEANIRVV 75 (113)
T ss_dssp SSSCEEEECSCCSSCHHHHHHHHHHTTC---EEESC-ST--------TCSEEECCH---HHHHHCCHHHHHHHHTTCCEE
T ss_pred cCCCEEEEEecCCCCHHHHHHHHHHCCC---EEcCc-cc--------cCccEEEEC---CCCCCCChHHHHHHHCCCcEE
Confidence 667899999953 267899999999873 23454 33 445555541 111335679999999999999
Q ss_pred Eec
Q 014316 393 AVS 395 (427)
Q Consensus 393 as~ 395 (427)
.-+
T Consensus 76 sE~ 78 (113)
T 2cok_A 76 SED 78 (113)
T ss_dssp CTH
T ss_pred eHH
Confidence 755
No 109
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=28.83 E-value=2.1e+02 Score=25.37 Aligned_cols=18 Identities=6% Similarity=0.097 Sum_probs=12.8
Q ss_pred HHHHHHhhCCCcEEEEecC
Q 014316 24 QALSLARQMSLEVDVVAYG 42 (427)
Q Consensus 24 ~a~~La~~~g~~V~vi~~~ 42 (427)
....++++ |++|++++..
T Consensus 21 tia~~~~~-G~~v~vv~lT 38 (227)
T 1uan_A 21 TLARAKAE-GLSTGILDLT 38 (227)
T ss_dssp HHHHHHHT-TCCEEEEEEE
T ss_pred HHHHHHhC-CCcEEEEEEc
Confidence 33456665 9999999854
No 110
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=27.96 E-value=1.3e+02 Score=26.68 Aligned_cols=59 Identities=15% Similarity=0.195 Sum_probs=28.5
Q ss_pred CCC-cceEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCC-CcccccCCCceEEEEee
Q 014316 1 MGR-RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSK-PHAAILEHPSIHIHTMT 62 (427)
Q Consensus 1 ~~~-~~~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~-~~~~~~~~~~i~v~~~~ 62 (427)
|+. ++|++|+..|.- ..++....+..+..+++|..+.....+ ...+.....||+++.++
T Consensus 1 ~~~~~~riavl~SG~G---snl~all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~gIp~~~~~ 61 (215)
T 3tqr_A 1 MNREPLPIVVLISGNG---TNLQAIIGAIQKGLAIEIRAVISNRADAYGLKRAQQADIPTHIIP 61 (215)
T ss_dssp ---CCEEEEEEESSCC---HHHHHHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHTTCCEEECC
T ss_pred CCCCCcEEEEEEeCCc---HHHHHHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHcCCCEEEeC
Confidence 444 356777665532 233333333332124676655544322 12234556699999887
No 111
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=27.86 E-value=92 Score=29.41 Aligned_cols=84 Identities=13% Similarity=0.074 Sum_probs=53.4
Q ss_pred CCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCC----------cccHHHHHhcCcEEEeec--cCCCCCCCchHHH
Q 014316 315 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLS----------AEDYPLLLGSADLGVCLH--TSSSGLDLPMKVV 382 (427)
Q Consensus 315 ~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~----------~~~~~~~l~~adi~v~p~--~~s~~e~~p~~~l 382 (427)
..-++-|+|-|.--..+.+.++.+|. +|......-. .+++.++++.||++++.. +.....-+....+
T Consensus 138 ~g~tvGIiG~G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l 216 (315)
T 3pp8_A 138 EEFSVGIMGAGVLGAKVAESLQAWGF-PLRCWSRSRKSWPGVESYVGREELRAFLNQTRVLINLLPNTAQTVGIINSELL 216 (315)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTC-CEEEEESSCCCCTTCEEEESHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHHH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCCchhhhhhhhhcccCCHHHHHhhCCEEEEecCCchhhhhhccHHHH
Confidence 34678999999766677777777765 3443321000 147889999999998721 1111233456778
Q ss_pred HHHcCCCcEEEeccCcc
Q 014316 383 DMFGCGLPVCAVSYSCI 399 (427)
Q Consensus 383 Eama~G~PVIas~~~g~ 399 (427)
..|--|.-+|-+.-|++
T Consensus 217 ~~mk~gailIN~aRG~~ 233 (315)
T 3pp8_A 217 DQLPDGAYVLNLARGVH 233 (315)
T ss_dssp TTSCTTEEEEECSCGGG
T ss_pred hhCCCCCEEEECCCChh
Confidence 88888877777666554
No 112
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=27.83 E-value=68 Score=25.26 Aligned_cols=107 Identities=8% Similarity=0.031 Sum_probs=61.2
Q ss_pred CCCEEEEEEeCCCC-hHHHHHHHHHcC-CCcEEEecCCCCcccHHHHH---hcCcEEEeeccCCCCCCCchHHHHHHc--
Q 014316 314 YPRLLFIITGKGPD-KESYEEKIRRLR-LKRVAFRTMWLSAEDYPLLL---GSADLGVCLHTSSSGLDLPMKVVDMFG-- 386 (427)
Q Consensus 314 ~~~~~l~i~G~G~~-~~~~~~~~~~l~-l~~V~f~g~~~~~~~~~~~l---~~adi~v~p~~~s~~e~~p~~~lEama-- 386 (427)
.+..+++|+.+.+. ...+++..++.| +.-+.+... .+.+..+. ...|++++= ......-|..+++.+.
T Consensus 18 ~~~~~ilivdd~~~~~~~l~~~L~~~g~~~v~~~~~~---~~~~~~~~~~~~~~dlvi~D--~~l~~~~g~~~~~~l~~~ 92 (146)
T 4dad_A 18 QGMINILVASEDASRLAHLARLVGDAGRYRVTRTVGR---AAQIVQRTDGLDAFDILMID--GAALDTAELAAIEKLSRL 92 (146)
T ss_dssp GGGCEEEEECSCHHHHHHHHHHHHHHCSCEEEEECCC---HHHHTTCHHHHTTCSEEEEE--CTTCCHHHHHHHHHHHHH
T ss_pred CCCCeEEEEeCCHHHHHHHHHHHhhCCCeEEEEeCCH---HHHHHHHHhcCCCCCEEEEe--CCCCCccHHHHHHHHHHh
Confidence 34578888887653 355677777776 433333222 33444433 457888862 1212223345555443
Q ss_pred -CCCcEEEec-cC---ccccceecCCcEEEeC--ChHHHHHHHHHh
Q 014316 387 -CGLPVCAVS-YS---CIEELVKVDKNGLLFS--SSSELADQLLVN 425 (427)
Q Consensus 387 -~G~PVIas~-~~---g~~e~v~~~~~G~l~~--~~~~la~~l~~~ 425 (427)
..+|||... .. ...+.++.|..+++.. +.++|.++|...
T Consensus 93 ~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~i~~~ 138 (146)
T 4dad_A 93 HPGLTCLLVTTDASSQTLLDAMRAGVRDVLRWPLEPRALDDALKRA 138 (146)
T ss_dssp CTTCEEEEEESCCCHHHHHHHHTTTEEEEEESSCCHHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCCHHHHHHHHHhCCceeEcCCCCHHHHHHHHHHH
Confidence 467887654 22 2344566778889884 568888888764
No 113
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=27.71 E-value=1.4e+02 Score=26.57 Aligned_cols=56 Identities=11% Similarity=0.071 Sum_probs=28.0
Q ss_pred cceEEEEEeCCCCCChhHHHHHHHHHhh-CCCcEEEEecCC-CCCcccccCCCceEEEEee
Q 014316 4 RGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGG-SKPHAAILEHPSIHIHTMT 62 (427)
Q Consensus 4 ~~~~~v~~~~~~~~~~r~~~~a~~La~~-~g~~V~vi~~~~-~~~~~~~~~~~~i~v~~~~ 62 (427)
|+|++|+..|.. ..++....+.... ...+|.++.... +.+-.+.....||+++.++
T Consensus 2 m~riavl~Sg~G---snl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~~ 59 (211)
T 3p9x_A 2 MKRVAIFASGSG---TNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEIPVCALD 59 (211)
T ss_dssp -CEEEEECCTTC---HHHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTTTCCEEECC
T ss_pred CCEEEEEEeCCc---hHHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHcCCCEEEeC
Confidence 456777666631 2344333333332 124565554432 2222344556799998876
No 114
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=27.57 E-value=2e+02 Score=27.55 Aligned_cols=85 Identities=12% Similarity=0.090 Sum_probs=56.7
Q ss_pred CCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCC------------CcccHHHHHhcCcEEEee--ccCCCCCCCch
Q 014316 314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWL------------SAEDYPLLLGSADLGVCL--HTSSSGLDLPM 379 (427)
Q Consensus 314 ~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~------------~~~~~~~~l~~adi~v~p--~~~s~~e~~p~ 379 (427)
...-++-|+|-|.--..+.+.++.+|.+ |......- ..+++.++++.||++++. .++....-+.-
T Consensus 162 l~gktvGIIG~G~IG~~vA~~l~~~G~~-V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~ 240 (351)
T 3jtm_A 162 LEGKTIGTVGAGRIGKLLLQRLKPFGCN-LLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNK 240 (351)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGGCCE-EEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSH
T ss_pred ccCCEEeEEEeCHHHHHHHHHHHHCCCE-EEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcH
Confidence 3456889999987666666666766653 55444200 124788999999999872 11122244567
Q ss_pred HHHHHHcCCCcEEEeccCcc
Q 014316 380 KVVDMFGCGLPVCAVSYSCI 399 (427)
Q Consensus 380 ~~lEama~G~PVIas~~~g~ 399 (427)
..++.|--|.-+|-+..|++
T Consensus 241 ~~l~~mk~gailIN~aRG~~ 260 (351)
T 3jtm_A 241 ELIGKLKKGVLIVNNARGAI 260 (351)
T ss_dssp HHHHHSCTTEEEEECSCGGG
T ss_pred HHHhcCCCCCEEEECcCchh
Confidence 88999999988888876664
No 115
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=27.52 E-value=80 Score=28.20 Aligned_cols=56 Identities=16% Similarity=0.102 Sum_probs=27.8
Q ss_pred cceEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEee
Q 014316 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62 (427)
Q Consensus 4 ~~~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~ 62 (427)
++|++|++.|.- .-++....++.+..+++|..+....+.+..+.....||+++..+
T Consensus 12 ~~ri~vl~SG~g---snl~all~~~~~~~~~eI~~Vis~~~a~~~~~A~~~gIp~~~~~ 67 (215)
T 3da8_A 12 PARLVVLASGTG---SLLRSLLDAAVGDYPARVVAVGVDRECRAAEIAAEASVPVFTVR 67 (215)
T ss_dssp SEEEEEEESSCC---HHHHHHHHHSSTTCSEEEEEEEESSCCHHHHHHHHTTCCEEECC
T ss_pred CcEEEEEEeCCh---HHHHHHHHHHhccCCCeEEEEEeCCchHHHHHHHHcCCCEEEeC
Confidence 456777666531 22332222222112346655544443323334556699888876
No 116
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=27.33 E-value=3.3e+02 Score=25.47 Aligned_cols=56 Identities=7% Similarity=0.085 Sum_probs=30.6
Q ss_pred CcceEEEEEeCCCCCChhHHHHHHHHHhh-CCCcEEEEecCCCCCcccccCCCceEEEEee
Q 014316 3 RRGRACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62 (427)
Q Consensus 3 ~~~~~~v~~~~~~~~~~r~~~~a~~La~~-~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~ 62 (427)
+++|++|++.+.. .-++....+.... .+.+|.++...... ..+.....||+++.++
T Consensus 104 ~~~ri~vl~Sg~g---~nl~~ll~~~~~g~l~~~I~~Visn~~~-~~~~A~~~gIp~~~~~ 160 (302)
T 3o1l_A 104 QKKRVVLMASRES---HCLADLLHRWHSDELDCDIACVISNHQD-LRSMVEWHDIPYYHVP 160 (302)
T ss_dssp SCCEEEEEECSCC---HHHHHHHHHHHTTCSCSEEEEEEESSST-THHHHHTTTCCEEECC
T ss_pred CCcEEEEEEeCCc---hhHHHHHHHHHCCCCCcEEEEEEECcHH-HHHHHHHcCCCEEEcC
Confidence 4678888776642 2333332333222 23566655544332 2345567799999987
No 117
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=27.24 E-value=1.9e+02 Score=26.90 Aligned_cols=85 Identities=11% Similarity=-0.019 Sum_probs=55.8
Q ss_pred CCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCC------CCcccHHHHHhcCcEEEeeccCC-CC-CCCchHHHHHH
Q 014316 314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMW------LSAEDYPLLLGSADLGVCLHTSS-SG-LDLPMKVVDMF 385 (427)
Q Consensus 314 ~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~------~~~~~~~~~l~~adi~v~p~~~s-~~-e~~p~~~lEam 385 (427)
...-++-|+|-|.--..+-+.++.+|. +|...... ....++.++++.||++++..... .. .-+....++.|
T Consensus 122 l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~m 200 (303)
T 1qp8_A 122 IQGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRTPKEGPWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALM 200 (303)
T ss_dssp CTTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSSCCCSSSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTS
T ss_pred CCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCccccCcccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhC
Confidence 445678999999877777777777775 35444320 22357889999999998722111 22 33445678888
Q ss_pred cCCCcEEEeccCcc
Q 014316 386 GCGLPVCAVSYSCI 399 (427)
Q Consensus 386 a~G~PVIas~~~g~ 399 (427)
--|.-+|-+..|++
T Consensus 201 k~gailin~srg~~ 214 (303)
T 1qp8_A 201 AEDAVFVNVGRAEV 214 (303)
T ss_dssp CTTCEEEECSCGGG
T ss_pred CCCCEEEECCCCcc
Confidence 88887777766654
No 118
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=27.21 E-value=85 Score=29.51 Aligned_cols=53 Identities=15% Similarity=0.154 Sum_probs=30.3
Q ss_pred EEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEee
Q 014316 7 ACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62 (427)
Q Consensus 7 ~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~ 62 (427)
..|++.|.-|..++. .+..|+++.||+|.+++..... ........+++++...
T Consensus 25 ~~vlVtGatG~iG~~--l~~~L~~~~g~~V~~~~r~~~~-~~~~~~~~~v~~~~~D 77 (372)
T 3slg_A 25 KKVLILGVNGFIGHH--LSKRILETTDWEVFGMDMQTDR-LGDLVKHERMHFFEGD 77 (372)
T ss_dssp CEEEEESCSSHHHHH--HHHHHHHHSSCEEEEEESCCTT-TGGGGGSTTEEEEECC
T ss_pred CEEEEECCCChHHHH--HHHHHHhCCCCEEEEEeCChhh-hhhhccCCCeEEEeCc
Confidence 345556644443333 3456666338999999865433 2333344578777665
No 119
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=26.95 E-value=34 Score=30.32 Aligned_cols=68 Identities=13% Similarity=0.010 Sum_probs=43.8
Q ss_pred HHHHHHHHHcCCCcEEEecCC-CCcccHHHHHhcCcEEEeeccCCC-------CCCCchHHHHHHcCCCcEEEeccC
Q 014316 329 ESYEEKIRRLRLKRVAFRTMW-LSAEDYPLLLGSADLGVCLHTSSS-------GLDLPMKVVDMFGCGLPVCAVSYS 397 (427)
Q Consensus 329 ~~~~~~~~~l~l~~V~f~g~~-~~~~~~~~~l~~adi~v~p~~~s~-------~e~~p~~~lEama~G~PVIas~~~ 397 (427)
..+++..+++|.+ +..+... -+.++..+.+.+||..++|=..+. ..++--.+-|+...|+|++.+..|
T Consensus 47 ~s~~~a~~~lG~~-v~~~~i~~~~~~~~~~~l~~ad~I~l~GG~~~~l~~~L~~~gl~~~l~~~~~~G~p~~G~sAG 122 (206)
T 3l4e_A 47 EAGKKALESLGLL-VEELDIATESLGEITTKLRKNDFIYVTGGNTFFLLQELKRTGADKLILEEIAAGKLYIGESAG 122 (206)
T ss_dssp HHHHHHHHHTTCE-EEECCTTTSCHHHHHHHHHHSSEEEECCSCHHHHHHHHHHHTHHHHHHHHHHTTCEEEEETHH
T ss_pred HHHHHHHHHcCCe-EEEEEecCCChHHHHHHHHhCCEEEECCCCHHHHHHHHHHCChHHHHHHHHHcCCeEEEECHH
Confidence 4556677788873 5554210 135667788999999998611110 023444688888899999999755
No 120
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=26.92 E-value=1.1e+02 Score=27.42 Aligned_cols=40 Identities=10% Similarity=0.025 Sum_probs=25.0
Q ss_pred hhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEE
Q 014316 19 PRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIH 59 (427)
Q Consensus 19 ~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~ 59 (427)
.-....+..|.+. |.+|+|+++...+...+.....+++++
T Consensus 41 ~va~~ka~~Ll~~-GA~VtVvap~~~~~l~~l~~~~~i~~i 80 (223)
T 3dfz_A 41 TIATRRIKGFLQE-GAAITVVAPTVSAEINEWEAKGQLRVK 80 (223)
T ss_dssp HHHHHHHHHHGGG-CCCEEEECSSCCHHHHHHHHTTSCEEE
T ss_pred HHHHHHHHHHHHC-CCEEEEECCCCCHHHHHHHHcCCcEEE
Confidence 4456667788886 999999987543322233334456554
No 121
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=26.80 E-value=2.1e+02 Score=21.86 Aligned_cols=104 Identities=6% Similarity=-0.052 Sum_probs=61.2
Q ss_pred CEEEEEEeCCCC-hHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhc--CcEEEeeccCCCCCCCchHHHHHHc-----C
Q 014316 316 RLLFIITGKGPD-KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS--ADLGVCLHTSSSGLDLPMKVVDMFG-----C 387 (427)
Q Consensus 316 ~~~l~i~G~G~~-~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~--adi~v~p~~~s~~e~~p~~~lEama-----~ 387 (427)
..+++|+.+.+. .+.+.+..++.|+ +|.... +.++....+.. .|++++= ......-+..+++.+. .
T Consensus 7 ~~~iLivdd~~~~~~~l~~~L~~~g~-~v~~~~---~~~~a~~~l~~~~~dlii~d--~~l~~~~g~~~~~~l~~~~~~~ 80 (142)
T 3cg4_A 7 KGDVMIVDDDAHVRIAVKTILSDAGF-HIISAD---SGGQCIDLLKKGFSGVVLLD--IMMPGMDGWDTIRAILDNSLEQ 80 (142)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTC-EEEEES---SHHHHHHHHHTCCCEEEEEE--SCCSSSCHHHHHHHHHHTTCCT
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHCCe-EEEEeC---CHHHHHHHHHhcCCCEEEEe--CCCCCCCHHHHHHHHHhhcccC
Confidence 467788876542 3456666666665 354434 36666666654 4666651 1222334556676664 3
Q ss_pred CCcEEEec-c---CccccceecCCcEEEeC--ChHHHHHHHHHh
Q 014316 388 GLPVCAVS-Y---SCIEELVKVDKNGLLFS--SSSELADQLLVN 425 (427)
Q Consensus 388 G~PVIas~-~---~g~~e~v~~~~~G~l~~--~~~~la~~l~~~ 425 (427)
.+|||... . ....+.++.|..+++.. +.++|.+.|...
T Consensus 81 ~~pii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~ 124 (142)
T 3cg4_A 81 GIAIVMLTAKNAPDAKMIGLQEYVVDYITKPFDNEDLIEKTTFF 124 (142)
T ss_dssp TEEEEEEECTTCCCCSSTTGGGGEEEEEESSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHhcCccEEEeCCCCHHHHHHHHHHH
Confidence 57877553 2 23344555677788883 568888887654
No 122
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=26.38 E-value=3.7e+02 Score=24.40 Aligned_cols=83 Identities=14% Similarity=0.044 Sum_probs=47.7
Q ss_pred HHHHHHHHHcCCCcEEEecCCCCcccHHHH----HhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCcccccee
Q 014316 329 ESYEEKIRRLRLKRVAFRTMWLSAEDYPLL----LGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVK 404 (427)
Q Consensus 329 ~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~----l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g~~e~v~ 404 (427)
+.+++.++++|++-+.... .+.+++.+. ....|++.++..............-+..+++||++... ..++
T Consensus 159 ~~~~~~~~~~g~~~v~~~~--~~~~~~~~~~~~l~~~~d~i~~~~d~~~~~~~~~i~~~~~~~~iPv~~~~~----~~v~ 232 (302)
T 3lkv_A 159 ELLKLSAAKHGIKLVEATA--LKSADVQSATQAIAEKSDVIYALIDNTVASAIEGMIVAANQAKTPVFGAAT----SYVE 232 (302)
T ss_dssp HHHHHHHHHTTCEEEEEEC--SSGGGHHHHHHHHHTTCSEEEECSCHHHHHTHHHHHHHHHHTTCCEEESSH----HHHH
T ss_pred HHHHHHHHHcCCEEEEEec--CChHHHHHHHHhccCCeeEEEEeCCcchhhHHHHHHHHHhhcCCceeeccc----cccc
Confidence 3466777777775444433 355555544 46788887752211112333345567789999998653 3455
Q ss_pred cCCcEEEeCChHH
Q 014316 405 VDKNGLLFSSSSE 417 (427)
Q Consensus 405 ~~~~G~l~~~~~~ 417 (427)
+|..|-+.-|..+
T Consensus 233 ~G~l~~~~~~~~~ 245 (302)
T 3lkv_A 233 RGAIASLGFDYYQ 245 (302)
T ss_dssp TTCSEEEECCHHH
T ss_pred CCceEEEecCHHH
Confidence 6666655555433
No 123
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=26.33 E-value=1.9e+02 Score=27.01 Aligned_cols=69 Identities=14% Similarity=0.007 Sum_probs=43.7
Q ss_pred CCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHh--cCcEEEeeccCCCCCCCchHHHHHHcCCCcEE
Q 014316 315 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG--SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC 392 (427)
Q Consensus 315 ~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~--~adi~v~p~~~s~~e~~p~~~lEama~G~PVI 392 (427)
+++.++-+-+ .+.+..++.+++++.. .. .+++.+++. ..|+++...... . =.-.+.+|+.+|++|+
T Consensus 43 ~~~~lvav~d-~~~~~~~~~a~~~~~~--~~------~~~~~~ll~~~~vD~V~i~tp~~--~-H~~~~~~al~aGkhVl 110 (340)
T 1zh8_A 43 HLFEITAVTS-RTRSHAEEFAKMVGNP--AV------FDSYEELLESGLVDAVDLTLPVE--L-NLPFIEKALRKGVHVI 110 (340)
T ss_dssp TTEEEEEEEC-SSHHHHHHHHHHHSSC--EE------ESCHHHHHHSSCCSEEEECCCGG--G-HHHHHHHHHHTTCEEE
T ss_pred CceEEEEEEc-CCHHHHHHHHHHhCCC--cc------cCCHHHHhcCCCCCEEEEeCCch--H-HHHHHHHHHHCCCcEE
Confidence 5676654443 4466777888887742 11 456777776 589998742111 1 1235778999999998
Q ss_pred Eec
Q 014316 393 AVS 395 (427)
Q Consensus 393 as~ 395 (427)
.-.
T Consensus 111 ~EK 113 (340)
T 1zh8_A 111 CEK 113 (340)
T ss_dssp EES
T ss_pred EeC
Confidence 754
No 124
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=26.11 E-value=1.5e+02 Score=28.34 Aligned_cols=84 Identities=17% Similarity=0.115 Sum_probs=56.4
Q ss_pred CCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCC-C---------cccHHHHHhcCcEEEeeccCC---CCCCCchH
Q 014316 314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWL-S---------AEDYPLLLGSADLGVCLHTSS---SGLDLPMK 380 (427)
Q Consensus 314 ~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~-~---------~~~~~~~l~~adi~v~p~~~s---~~e~~p~~ 380 (427)
...-++-|+|-|.--..+.+.++.+|. +|......- + .+++.++++.||++++. .+. ...-+...
T Consensus 171 l~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~g~~~~~~l~ell~~sDvV~l~-~Plt~~T~~li~~~ 248 (345)
T 4g2n_A 171 LTGRRLGIFGMGRIGRAIATRARGFGL-AIHYHNRTRLSHALEEGAIYHDTLDSLLGASDIFLIA-APGRPELKGFLDHD 248 (345)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHTTCEECSSHHHHHHTCSEEEEC-SCCCGGGTTCBCHH
T ss_pred cCCCEEEEEEeChhHHHHHHHHHHCCC-EEEEECCCCcchhhhcCCeEeCCHHHHHhhCCEEEEe-cCCCHHHHHHhCHH
Confidence 345688999998766667777777664 455444311 0 14788999999999872 221 22345667
Q ss_pred HHHHHcCCCcEEEeccCcc
Q 014316 381 VVDMFGCGLPVCAVSYSCI 399 (427)
Q Consensus 381 ~lEama~G~PVIas~~~g~ 399 (427)
.+..|--|.-+|-+..|++
T Consensus 249 ~l~~mk~gailIN~aRG~~ 267 (345)
T 4g2n_A 249 RIAKIPEGAVVINISRGDL 267 (345)
T ss_dssp HHHHSCTTEEEEECSCGGG
T ss_pred HHhhCCCCcEEEECCCCch
Confidence 8899988888887776664
No 125
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=26.11 E-value=2.2e+02 Score=21.72 Aligned_cols=105 Identities=9% Similarity=0.016 Sum_probs=62.7
Q ss_pred CEEEEEEeCCCC-hHHHHHHHHH-cCCCcEEEecCCCCcccHHHHHhc--CcEEEeeccCCCCCCCchHHHHHHcC----
Q 014316 316 RLLFIITGKGPD-KESYEEKIRR-LRLKRVAFRTMWLSAEDYPLLLGS--ADLGVCLHTSSSGLDLPMKVVDMFGC---- 387 (427)
Q Consensus 316 ~~~l~i~G~G~~-~~~~~~~~~~-l~l~~V~f~g~~~~~~~~~~~l~~--adi~v~p~~~s~~e~~p~~~lEama~---- 387 (427)
..+++|+.+.+. ...+.+..++ .|++.|..... .++....+.. .|++++= ......-+..+++.+..
T Consensus 8 ~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~---~~~a~~~l~~~~~dlii~d--~~l~~~~g~~~~~~l~~~~~~ 82 (143)
T 3cnb_A 8 DFSILIIEDDKEFADMLTQFLENLFPYAKIKIAYN---PFDAGDLLHTVKPDVVMLD--LMMVGMDGFSICHRIKSTPAT 82 (143)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHHCTTCEEEEECS---HHHHHHHHHHTCCSEEEEE--TTCTTSCHHHHHHHHHTSTTT
T ss_pred CceEEEEECCHHHHHHHHHHHHhccCccEEEEECC---HHHHHHHHHhcCCCEEEEe--cccCCCcHHHHHHHHHhCccc
Confidence 467788876543 3456666676 66653555443 5666665553 6777762 12223345566666643
Q ss_pred -CCcEEEec-cCc---cccceecCCcEEEeC--ChHHHHHHHHHh
Q 014316 388 -GLPVCAVS-YSC---IEELVKVDKNGLLFS--SSSELADQLLVN 425 (427)
Q Consensus 388 -G~PVIas~-~~g---~~e~v~~~~~G~l~~--~~~~la~~l~~~ 425 (427)
.+|||... ... ..+.++.|..+++.. +.++|.++|...
T Consensus 83 ~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~ 127 (143)
T 3cnb_A 83 ANIIVIAMTGALTDDNVSRIVALGAETCFGKPLNFTLLEKTIKQL 127 (143)
T ss_dssp TTSEEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHH
T ss_pred cCCcEEEEeCCCCHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHHH
Confidence 67887543 222 244556788899983 568888887764
No 126
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=25.97 E-value=1.5e+02 Score=25.10 Aligned_cols=40 Identities=8% Similarity=-0.084 Sum_probs=26.6
Q ss_pred HHHHhcCcEEEeeccCCCC-CCCchHHHH---HHcCCCcEEEec
Q 014316 356 PLLLGSADLGVCLHTSSSG-LDLPMKVVD---MFGCGLPVCAVS 395 (427)
Q Consensus 356 ~~~l~~adi~v~p~~~s~~-e~~p~~~lE---ama~G~PVIas~ 395 (427)
.+.+..||++|...++-.+ +.=+.+.+| |.|.|+|||+-.
T Consensus 62 ~~~i~~aD~vVA~ldpf~g~~~D~GTafEiGyA~AlgKPVi~l~ 105 (161)
T 2f62_A 62 IQMIKDCDAVIADLSPFRGHEPDCGTAFEVGCAAALNKMVLTFT 105 (161)
T ss_dssp HHHHHHCSEEEEECCCCSSSSCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHhCCEEEEEecCCCCCCCCCcHHHHHHHHHHCCCEEEEEE
Confidence 5779999999875332111 223336666 789999999854
No 127
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=25.88 E-value=2.3e+02 Score=21.89 Aligned_cols=105 Identities=9% Similarity=0.018 Sum_probs=63.6
Q ss_pred CCEEEEEEeCCC-ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHh--cCcEEEeeccCCCCCCCchHHHHHHcC----
Q 014316 315 PRLLFIITGKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG--SADLGVCLHTSSSGLDLPMKVVDMFGC---- 387 (427)
Q Consensus 315 ~~~~l~i~G~G~-~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~--~adi~v~p~~~s~~e~~p~~~lEama~---- 387 (427)
...+++++.+.+ ....+.+..++.|+ +|.... +.++....+. ..|++++= ......-+..+++.+..
T Consensus 7 ~~~~iLivd~~~~~~~~l~~~L~~~g~-~v~~~~---~~~~a~~~l~~~~~dlii~d--~~l~~~~g~~~~~~l~~~~~~ 80 (147)
T 2zay_A 7 KWWRIMLVDTQLPALAASISALSQEGF-DIIQCG---NAIEAVPVAVKTHPHLIITE--ANMPKISGMDLFNSLKKNPQT 80 (147)
T ss_dssp -CEEEEEECTTGGGGHHHHHHHHHHTE-EEEEES---SHHHHHHHHHHHCCSEEEEE--SCCSSSCHHHHHHHHHTSTTT
T ss_pred CCceEEEEeCCHHHHHHHHHHHHHcCC-eEEEeC---CHHHHHHHHHcCCCCEEEEc--CCCCCCCHHHHHHHHHcCccc
Confidence 357788888765 34566777777665 344433 3556555554 36888762 12223345577777653
Q ss_pred -CCcEEEec-cCc---cccceecCCcEEEeC--ChHHHHHHHHHh
Q 014316 388 -GLPVCAVS-YSC---IEELVKVDKNGLLFS--SSSELADQLLVN 425 (427)
Q Consensus 388 -G~PVIas~-~~g---~~e~v~~~~~G~l~~--~~~~la~~l~~~ 425 (427)
.+|||... ... ..+.++.|..+++.. +.++|.+.|...
T Consensus 81 ~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~~i~~~ 125 (147)
T 2zay_A 81 ASIPVIALSGRATAKEEAQLLDMGFIDFIAKPVNAIRLSARIKRV 125 (147)
T ss_dssp TTSCEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHhCCCCEEEeCCCCHHHHHHHHHHH
Confidence 67887554 222 234456788899983 568888887654
No 128
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=25.87 E-value=2.3e+02 Score=26.44 Aligned_cols=85 Identities=13% Similarity=0.060 Sum_probs=53.6
Q ss_pred CCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCC-----CcccHHHHHhcCcEEEeeccCC-CC-CCCchHHHHHHc
Q 014316 314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWL-----SAEDYPLLLGSADLGVCLHTSS-SG-LDLPMKVVDMFG 386 (427)
Q Consensus 314 ~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~-----~~~~~~~~l~~adi~v~p~~~s-~~-e~~p~~~lEama 386 (427)
...-++-|+|-|.--..+-+.++.+|. +|....... ...++.++++.||++++..... .. .-+.-..++.|-
T Consensus 142 l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk 220 (311)
T 2cuk_A 142 LQGLTLGLVGMGRIGQAVAKRALAFGM-RVVYHARTPKPLPYPFLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAMK 220 (311)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSSSSCBCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSC
T ss_pred CCCCEEEEEEECHHHHHHHHHHHHCCC-EEEEECCCCcccccccCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCC
Confidence 445678999999766667677777764 455544311 1346889999999998721111 12 334445677777
Q ss_pred CCCcEEEeccCcc
Q 014316 387 CGLPVCAVSYSCI 399 (427)
Q Consensus 387 ~G~PVIas~~~g~ 399 (427)
-|.-+|-+..|++
T Consensus 221 ~ga~lin~srg~~ 233 (311)
T 2cuk_A 221 RGAILLNTARGAL 233 (311)
T ss_dssp TTCEEEECSCGGG
T ss_pred CCcEEEECCCCCc
Confidence 7777776665553
No 129
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=25.51 E-value=2.1e+02 Score=27.87 Aligned_cols=84 Identities=11% Similarity=-0.018 Sum_probs=57.5
Q ss_pred CEEEEEEeCCCChHHHHHHHHHcCCCcEEEecC-------CCCcccHHHHHhcCcEEEe--eccCC----CCCCCchHHH
Q 014316 316 RLLFIITGKGPDKESYEEKIRRLRLKRVAFRTM-------WLSAEDYPLLLGSADLGVC--LHTSS----SGLDLPMKVV 382 (427)
Q Consensus 316 ~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~-------~~~~~~~~~~l~~adi~v~--p~~~s----~~e~~p~~~l 382 (427)
+-++-|+|-|.--..+.+.++.+|. +|..... -....++.++++.||++++ |.+.. ...-+....+
T Consensus 119 gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~~~~~~~~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~~~~l 197 (381)
T 3oet_A 119 DRTIGIVGVGNVGSRLQTRLEALGI-RTLLCDPPRAARGDEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADETLI 197 (381)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHTTC-EEEEECHHHHHTTCCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBCHHHH
T ss_pred CCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCChHHhccCcccCCHHHHHhhCCEEEEcCcCCccccccchhhcCHHHH
Confidence 4578999999766777777777775 3443321 0235678899999999986 21111 2234556789
Q ss_pred HHHcCCCcEEEeccCccc
Q 014316 383 DMFGCGLPVCAVSYSCIE 400 (427)
Q Consensus 383 Eama~G~PVIas~~~g~~ 400 (427)
+.|--|.-+|-+.-|++.
T Consensus 198 ~~mk~gailIN~aRG~vv 215 (381)
T 3oet_A 198 RRLKPGAILINACRGPVV 215 (381)
T ss_dssp HHSCTTEEEEECSCGGGB
T ss_pred hcCCCCcEEEECCCCccc
Confidence 999999988888877753
No 130
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=25.30 E-value=2.6e+02 Score=22.36 Aligned_cols=118 Identities=11% Similarity=-0.023 Sum_probs=60.4
Q ss_pred HHHHHHHHhhCCCcEEEEecCCCCCccccc--CCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhh
Q 014316 22 QYQALSLARQMSLEVDVVAYGGSKPHAAIL--EHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKI 99 (427)
Q Consensus 22 ~~~a~~La~~~g~~V~vi~~~~~~~~~~~~--~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (427)
...+..|.+. |++|+++............ ...++.++.-. .. .... +.+ ...
T Consensus 16 ~~la~~L~~~-g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd--~~-------~~~~-------l~~---------a~i 69 (153)
T 1id1_A 16 INTILQLNQR-GQNVTVISNLPEDDIKQLEQRLGDNADVIPGD--SN-------DSSV-------LKK---------AGI 69 (153)
T ss_dssp HHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHCTTCEEEESC--TT-------SHHH-------HHH---------HTT
T ss_pred HHHHHHHHHC-CCCEEEEECCChHHHHHHHHhhcCCCeEEEcC--CC-------CHHH-------HHH---------cCh
Confidence 4456778886 9999999864211001111 12366665544 11 1111 111 012
Q ss_pred CCCcEEEEcCCCChhHHHHHHHHHhhcC-CcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHH
Q 014316 100 ASPDVFLVQNPPSVPTLVAVKWASSLRR-SAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQ 178 (427)
Q Consensus 100 ~~~Dvv~~~~p~~~~~~~~~~~~~~~~~-~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~ 178 (427)
.+.|+|++..+..-....++..+..+.+ .+++...++..+ ...+++ --+|.++.......
T Consensus 70 ~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~~~~~~~----------------~~~l~~---~G~~~vi~p~~~~~ 130 (153)
T 1id1_A 70 DRCRAILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDSKN----------------LNKIKM---VHPDIILSPQLFGS 130 (153)
T ss_dssp TTCSEEEECSSCHHHHHHHHHHHHHHTSSSCEEEECSSGGG----------------HHHHHT---TCCSEEECHHHHHH
T ss_pred hhCCEEEEecCChHHHHHHHHHHHHHCCCCEEEEEECCHHH----------------HHHHHH---cCCCEEEcHHHHHH
Confidence 6899998887554444454445555533 456666665532 011111 13777877766666
Q ss_pred HHHHHh
Q 014316 179 HELAQN 184 (427)
Q Consensus 179 ~~l~~~ 184 (427)
+.+.+.
T Consensus 131 ~~l~~~ 136 (153)
T 1id1_A 131 EILARV 136 (153)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666543
No 131
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=25.30 E-value=2.3e+02 Score=21.79 Aligned_cols=105 Identities=9% Similarity=0.113 Sum_probs=65.3
Q ss_pred CEEEEEEeCCC-ChHHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhc--CcEEEeeccCCCCCCCchHHHHHHcC----
Q 014316 316 RLLFIITGKGP-DKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGS--ADLGVCLHTSSSGLDLPMKVVDMFGC---- 387 (427)
Q Consensus 316 ~~~l~i~G~G~-~~~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~--adi~v~p~~~s~~e~~p~~~lEama~---- 387 (427)
..+++|+.+.+ ....+++..++.|.. .|..... .++....+.. .|++++ .......-|..+++.+..
T Consensus 5 ~~~ILivdd~~~~~~~l~~~L~~~~~~~~v~~~~~---~~~a~~~l~~~~~dlii~--D~~l~~~~g~~~~~~lr~~~~~ 79 (144)
T 3kht_A 5 SKRVLVVEDNPDDIALIRRVLDRKDIHCQLEFVDN---GAKALYQVQQAKYDLIIL--DIGLPIANGFEVMSAVRKPGAN 79 (144)
T ss_dssp CEEEEEECCCHHHHHHHHHHHHHTTCCEEEEEESS---HHHHHHHHTTCCCSEEEE--CTTCGGGCHHHHHHHHHSSSTT
T ss_pred CCEEEEEeCCHHHHHHHHHHHHhcCCCeeEEEECC---HHHHHHHhhcCCCCEEEE--eCCCCCCCHHHHHHHHHhcccc
Confidence 46788888654 335567777777765 3544443 6666666654 577775 112223345677777654
Q ss_pred -CCcEEEeccC----ccccceecCCcEEEe--C-ChHHHHHHHHHh
Q 014316 388 -GLPVCAVSYS----CIEELVKVDKNGLLF--S-SSSELADQLLVN 425 (427)
Q Consensus 388 -G~PVIas~~~----g~~e~v~~~~~G~l~--~-~~~~la~~l~~~ 425 (427)
++|||..... ...+.++.|..+++. - +.++|.++|...
T Consensus 80 ~~~pii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~~l~~~i~~~ 125 (144)
T 3kht_A 80 QHTPIVILTDNVSDDRAKQCMAAGASSVVDKSSNNVTDFYGRIYAI 125 (144)
T ss_dssp TTCCEEEEETTCCHHHHHHHHHTTCSEEEECCTTSHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCcHHHHHHHHHHH
Confidence 6788865432 233456678889998 3 678888888764
No 132
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=25.17 E-value=1.8e+02 Score=28.01 Aligned_cols=85 Identities=13% Similarity=0.074 Sum_probs=54.8
Q ss_pred CCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCC------------CcccHHHHHhcCcEEEeeccCC--CC-CCCc
Q 014316 314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWL------------SAEDYPLLLGSADLGVCLHTSS--SG-LDLP 378 (427)
Q Consensus 314 ~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~------------~~~~~~~~l~~adi~v~p~~~s--~~-e~~p 378 (427)
...-++-|+|-|.--..+.+.++.+|.++|......- ..+++.++++.||++++. .+. .. .-+.
T Consensus 162 l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~-~P~t~~t~~li~ 240 (364)
T 2j6i_A 162 IEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVN-APLHAGTKGLIN 240 (364)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEEC-CCCSTTTTTCBC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEEC-CCCChHHHHHhC
Confidence 3456789999987666666667777754355544201 013678899999999872 222 12 3344
Q ss_pred hHHHHHHcCCCcEEEeccCcc
Q 014316 379 MKVVDMFGCGLPVCAVSYSCI 399 (427)
Q Consensus 379 ~~~lEama~G~PVIas~~~g~ 399 (427)
...++.|--|.-+|.+..|++
T Consensus 241 ~~~l~~mk~ga~lIn~arG~~ 261 (364)
T 2j6i_A 241 KELLSKFKKGAWLVNTARGAI 261 (364)
T ss_dssp HHHHTTSCTTEEEEECSCGGG
T ss_pred HHHHhhCCCCCEEEECCCCch
Confidence 567788888877887776654
No 133
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=24.97 E-value=58 Score=28.29 Aligned_cols=38 Identities=11% Similarity=0.143 Sum_probs=27.2
Q ss_pred cceEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCC
Q 014316 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGG 43 (427)
Q Consensus 4 ~~~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~ 43 (427)
++++.+.+.|..+.. .....+..|.+. |++|+|+....
T Consensus 2 ~k~IllgvTGs~aa~-k~~~l~~~L~~~-g~~V~vv~T~~ 39 (181)
T 1g63_A 2 YGKLLICATASINVI-NINHYIVELKQH-FDEVNILFSPS 39 (181)
T ss_dssp CCCEEEEECSCGGGG-GHHHHHHHHTTT-SSCEEEEECGG
T ss_pred CCEEEEEEECHHHHH-HHHHHHHHHHHC-CCEEEEEEchh
Confidence 356777777766554 556667788775 99999997543
No 134
>1kzy_C Tumor suppressor P53-binding protein 1; tandem-BRCT and linker complexed with non-BRCT protein, three-helix bundle, parallel beta sheet; 2.50A {Homo sapiens} SCOP: c.15.1.4 c.15.1.4 PDB: 1gzh_B
Probab=24.77 E-value=89 Score=28.55 Aligned_cols=19 Identities=16% Similarity=0.198 Sum_probs=16.6
Q ss_pred CchHHHHHHcCCCcEEEec
Q 014316 377 LPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 377 ~p~~~lEama~G~PVIas~ 395 (427)
-..|.+.|+|.|+|||..+
T Consensus 98 rt~K~l~ala~g~~iVs~~ 116 (259)
T 1kzy_C 98 RTRKYFLCLASGIPCVSHV 116 (259)
T ss_dssp CSHHHHHHHHHTCCEEETH
T ss_pred CcHHHHHHHhcCCCCccHH
Confidence 4569999999999999985
No 135
>1q74_A 1D-MYO-inosityl 2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase (MSHB); rossmann fold, zinc aminohydrolase; HET: PE4; 1.70A {Mycobacterium tuberculosis} SCOP: c.134.1.1 PDB: 1q7t_A*
Probab=24.43 E-value=2.3e+02 Score=26.30 Aligned_cols=18 Identities=17% Similarity=0.191 Sum_probs=13.2
Q ss_pred HHHHHHhhCCCcEEEEecC
Q 014316 24 QALSLARQMSLEVDVVAYG 42 (427)
Q Consensus 24 ~a~~La~~~g~~V~vi~~~ 42 (427)
....++++ |++|+|+|..
T Consensus 24 tla~~~~~-G~~V~vv~lT 41 (303)
T 1q74_A 24 TIAHYTSR-GAQVHVVTCT 41 (303)
T ss_dssp HHHHHHHT-TCEEEEEESC
T ss_pred HHHHHHHC-CCcEEEEEEc
Confidence 33556675 9999999854
No 136
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=24.30 E-value=2.4e+02 Score=26.74 Aligned_cols=83 Identities=12% Similarity=0.039 Sum_probs=55.7
Q ss_pred CEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCC---------CcccHHHHHhcCcEEEee--ccCCCCCCCchHHHHH
Q 014316 316 RLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWL---------SAEDYPLLLGSADLGVCL--HTSSSGLDLPMKVVDM 384 (427)
Q Consensus 316 ~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~---------~~~~~~~~l~~adi~v~p--~~~s~~e~~p~~~lEa 384 (427)
.-++-|+|-|.--..+.+.++.+|. +|....... ...++.++++.||++++. .+.....-+....++.
T Consensus 141 g~tvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~ 219 (334)
T 2pi1_A 141 RLTLGVIGTGRIGSRVAMYGLAFGM-KVLCYDVVKREDLKEKGCVYTSLDELLKESDVISLHVPYTKETHHMINEERISL 219 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHH
T ss_pred CceEEEECcCHHHHHHHHHHHHCcC-EEEEECCCcchhhHhcCceecCHHHHHhhCCEEEEeCCCChHHHHhhCHHHHhh
Confidence 4578999998766677777777764 344433211 122478899999999762 1122224466688999
Q ss_pred HcCCCcEEEeccCcc
Q 014316 385 FGCGLPVCAVSYSCI 399 (427)
Q Consensus 385 ma~G~PVIas~~~g~ 399 (427)
|--|.-+|-+..|++
T Consensus 220 mk~gailIN~aRg~~ 234 (334)
T 2pi1_A 220 MKDGVYLINTARGKV 234 (334)
T ss_dssp SCTTEEEEECSCGGG
T ss_pred CCCCcEEEECCCCcc
Confidence 999988888877764
No 137
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=24.28 E-value=1.7e+02 Score=25.90 Aligned_cols=54 Identities=15% Similarity=0.090 Sum_probs=28.0
Q ss_pred eEEEEEeCCCCCChhHHHHHHHHHhh-CCCcEEEEecC-CCCCcccccCCCceEEEEee
Q 014316 6 RACVVVLGDLGRSPRMQYQALSLARQ-MSLEVDVVAYG-GSKPHAAILEHPSIHIHTMT 62 (427)
Q Consensus 6 ~~~v~~~~~~~~~~r~~~~a~~La~~-~g~~V~vi~~~-~~~~~~~~~~~~~i~v~~~~ 62 (427)
|++|+..|.. ..++....++.+. .+++|..+... .+....+.....||+++.++
T Consensus 2 ri~vl~Sg~g---snl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~gIp~~~~~ 57 (212)
T 1jkx_A 2 NIVVLISGNG---SNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLI 57 (212)
T ss_dssp EEEEEESSCC---HHHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECC
T ss_pred EEEEEEECCc---HHHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHcCCcEEEeC
Confidence 5666665533 2344333344443 24676544433 33223344556799999876
No 138
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=24.09 E-value=2.6e+02 Score=21.83 Aligned_cols=106 Identities=12% Similarity=0.145 Sum_probs=62.2
Q ss_pred CEEEEEEeCCCC-hHHHHHHHHHcCC-CcEEEecCCCCcccHHHHHhc--CcEEEeeccCCCCCCCchHHHHHHc---CC
Q 014316 316 RLLFIITGKGPD-KESYEEKIRRLRL-KRVAFRTMWLSAEDYPLLLGS--ADLGVCLHTSSSGLDLPMKVVDMFG---CG 388 (427)
Q Consensus 316 ~~~l~i~G~G~~-~~~~~~~~~~l~l-~~V~f~g~~~~~~~~~~~l~~--adi~v~p~~~s~~e~~p~~~lEama---~G 388 (427)
..+++|+.+.+. .+.+++..++.+- ..|.... +.++....+.. .|++++ .......-|..+++.+. ..
T Consensus 20 m~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~---~~~~al~~l~~~~~dlii~--D~~l~~~~g~~~~~~l~~~~~~ 94 (150)
T 4e7p_A 20 HMKVLVAEDQSMLRDAMCQLLTLQPDVESVLQAK---NGQEAIQLLEKESVDIAIL--DVEMPVKTGLEVLEWIRSEKLE 94 (150)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHTSTTEEEEEEES---SHHHHHHHHTTSCCSEEEE--CSSCSSSCHHHHHHHHHHTTCS
T ss_pred ccEEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEC---CHHHHHHHhhccCCCEEEE--eCCCCCCcHHHHHHHHHHhCCC
Confidence 478888887542 2345555554432 1344433 36666666654 577775 11222344556666553 46
Q ss_pred CcEEEeccC----ccccceecCCcEEEeC--ChHHHHHHHHHhc
Q 014316 389 LPVCAVSYS----CIEELVKVDKNGLLFS--SSSELADQLLVNA 426 (427)
Q Consensus 389 ~PVIas~~~----g~~e~v~~~~~G~l~~--~~~~la~~l~~~~ 426 (427)
+|||..... ...+.++.|..+++.. +.++|.++|....
T Consensus 95 ~~ii~ls~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~~~~ 138 (150)
T 4e7p_A 95 TKVVVVTTFKRAGYFERAVKAGVDAYVLKERSIADLMQTLHTVL 138 (150)
T ss_dssp CEEEEEESCCCHHHHHHHHHTTCSEEEETTSCHHHHHHHHHHHH
T ss_pred CeEEEEeCCCCHHHHHHHHHCCCcEEEecCCCHHHHHHHHHHHH
Confidence 777755422 3445667788999993 5788998887653
No 139
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=23.76 E-value=2e+02 Score=26.77 Aligned_cols=85 Identities=13% Similarity=0.022 Sum_probs=55.6
Q ss_pred CCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCC-------cccHHHHHhcCcEEEeecc--CCCCCCCchHHHHH
Q 014316 314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLS-------AEDYPLLLGSADLGVCLHT--SSSGLDLPMKVVDM 384 (427)
Q Consensus 314 ~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~-------~~~~~~~l~~adi~v~p~~--~s~~e~~p~~~lEa 384 (427)
...-++-|+|-|.--..+.+.++.+|. +|........ .+++.++++.||+.++... .....-+....++.
T Consensus 120 l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~ 198 (290)
T 3gvx_A 120 LYGKALGILGYGGIGRRVAHLAKAFGM-RVIAYTRSSVDQNVDVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLAN 198 (290)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSCCCTTCSEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTT
T ss_pred eecchheeeccCchhHHHHHHHHhhCc-EEEEEeccccccccccccCChHHHhhccCeEEEEeeccccchhhhhHHHHhh
Confidence 334678999999766677777777775 3444332111 2378899999999987211 12223455678888
Q ss_pred HcCCCcEEEeccCcc
Q 014316 385 FGCGLPVCAVSYSCI 399 (427)
Q Consensus 385 ma~G~PVIas~~~g~ 399 (427)
|--|.-+|-+..|++
T Consensus 199 mk~gailIN~aRG~~ 213 (290)
T 3gvx_A 199 ARKNLTIVNVARADV 213 (290)
T ss_dssp CCTTCEEEECSCGGG
T ss_pred hhcCceEEEeehhcc
Confidence 888888887766553
No 140
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=23.62 E-value=2.3e+02 Score=21.15 Aligned_cols=104 Identities=13% Similarity=0.119 Sum_probs=61.2
Q ss_pred EEEEEEeCCCC-hHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhc--CcEEEeeccCCCCCCCchHHHHHHcC-----C
Q 014316 317 LLFIITGKGPD-KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS--ADLGVCLHTSSSGLDLPMKVVDMFGC-----G 388 (427)
Q Consensus 317 ~~l~i~G~G~~-~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~--adi~v~p~~~s~~e~~p~~~lEama~-----G 388 (427)
.+++++.+.+. ...++...++.|...|..... .++....+.. .|++++= ......-|..+++.+.. .
T Consensus 5 ~~ilivdd~~~~~~~l~~~l~~~~~~~v~~~~~---~~~a~~~~~~~~~dlvi~D--~~l~~~~g~~l~~~l~~~~~~~~ 79 (128)
T 1jbe_A 5 LKFLVVDDFSTMRRIVRNLLKELGFNNVEEAED---GVDALNKLQAGGYGFVISD--WNMPNMDGLELLKTIRAXXAMSA 79 (128)
T ss_dssp CCEEEECSCHHHHHHHHHHHHHTTCCCEEEESS---HHHHHHHHTTCCCCEEEEE--SCCSSSCHHHHHHHHHC--CCTT
T ss_pred cEEEEECCCHHHHHHHHHHHHHcCCcEEEeeCC---HHHHHHHHHhcCCCEEEEe--CCCCCCCHHHHHHHHHhhcccCC
Confidence 55777776543 344566666666645554443 5555555543 5777762 12223345577777653 5
Q ss_pred CcEEEec-cC---ccccceecCCcEEEeC--ChHHHHHHHHHh
Q 014316 389 LPVCAVS-YS---CIEELVKVDKNGLLFS--SSSELADQLLVN 425 (427)
Q Consensus 389 ~PVIas~-~~---g~~e~v~~~~~G~l~~--~~~~la~~l~~~ 425 (427)
+|+|... .. ...+.++.|..+++.. +.++|.+.+...
T Consensus 80 ~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~~~i~~~ 122 (128)
T 1jbe_A 80 LPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKI 122 (128)
T ss_dssp CCEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHH
T ss_pred CcEEEEecCccHHHHHHHHHhCcCceeecCCCHHHHHHHHHHH
Confidence 6777543 22 2344566788899984 568888887654
No 141
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=23.56 E-value=51 Score=28.18 Aligned_cols=41 Identities=15% Similarity=0.162 Sum_probs=22.4
Q ss_pred CCCcceEEEEEeCCCCCChhHHHHH-HHHHhhCCCcEEEEecCC
Q 014316 1 MGRRGRACVVVLGDLGRSPRMQYQA-LSLARQMSLEVDVVAYGG 43 (427)
Q Consensus 1 ~~~~~~~~v~~~~~~~~~~r~~~~a-~~La~~~g~~V~vi~~~~ 43 (427)
|.+|++++|+..+ -|....+...+ ..+.+. |++|.++....
T Consensus 1 M~~mmkilii~~S-~g~T~~la~~i~~~l~~~-g~~v~~~~l~~ 42 (199)
T 2zki_A 1 MSCKPNILVLFYG-YGSIVELAKEIGKGAEEA-GAEVKIRRVRE 42 (199)
T ss_dssp --CCCEEEEEECC-SSHHHHHHHHHHHHHHHH-SCEEEEEECCC
T ss_pred CCCCcEEEEEEeC-ccHHHHHHHHHHHHHHhC-CCEEEEEehhH
Confidence 6666677776666 43333333332 334444 89999987543
No 142
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=23.40 E-value=1.9e+02 Score=27.26 Aligned_cols=82 Identities=10% Similarity=0.058 Sum_probs=53.5
Q ss_pred CEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCC--------c-ccHHHHHhcCcEEEeeccCCC---CCCCchHHHH
Q 014316 316 RLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLS--------A-EDYPLLLGSADLGVCLHTSSS---GLDLPMKVVD 383 (427)
Q Consensus 316 ~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~--------~-~~~~~~l~~adi~v~p~~~s~---~e~~p~~~lE 383 (427)
.-++-|+|-|.--..+.+.++.+|. +|.......+ . +++.++++.||++++. .+.. ..-+....++
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~~l~ell~~aDvV~l~-~p~~~~t~~li~~~~l~ 223 (333)
T 1j4a_A 146 DQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPELEKKGYYVDSLDDLYKQADVISLH-VPDVPANVHMINDESIA 223 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHTTCBCSCHHHHHHHCSEEEEC-SCCCGGGTTCBSHHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCcchhHHhhCeecCCHHHHHhhCCEEEEc-CCCcHHHHHHHhHHHHh
Confidence 4578889998766667777777765 4554443111 1 2678899999999873 2211 1234456888
Q ss_pred HHcCCCcEEEeccCcc
Q 014316 384 MFGCGLPVCAVSYSCI 399 (427)
Q Consensus 384 ama~G~PVIas~~~g~ 399 (427)
.|.-|.-+|.+..|++
T Consensus 224 ~mk~ga~lIn~arg~~ 239 (333)
T 1j4a_A 224 KMKQDVVIVNVSRGPL 239 (333)
T ss_dssp HSCTTEEEEECSCGGG
T ss_pred hCCCCcEEEECCCCcc
Confidence 8988887887776654
No 143
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=23.24 E-value=3.4e+02 Score=22.94 Aligned_cols=53 Identities=13% Similarity=0.121 Sum_probs=27.7
Q ss_pred CCCcceEEEEEeCCCCCChhH-HHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEee
Q 014316 1 MGRRGRACVVVLGDLGRSPRM-QYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMT 62 (427)
Q Consensus 1 ~~~~~~~~v~~~~~~~~~~r~-~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~ 62 (427)
|..|++++| .| .++.+ ...+..|+++ |++|.+++...++ .... ..+++++...
T Consensus 1 M~~m~~ilI--tG---atG~iG~~l~~~L~~~-g~~V~~~~r~~~~-~~~~--~~~~~~~~~D 54 (227)
T 3dhn_A 1 MEKVKKIVL--IG---ASGFVGSALLNEALNR-GFEVTAVVRHPEK-IKIE--NEHLKVKKAD 54 (227)
T ss_dssp --CCCEEEE--ET---CCHHHHHHHHHHHHTT-TCEEEEECSCGGG-CCCC--CTTEEEECCC
T ss_pred CCCCCEEEE--Ec---CCchHHHHHHHHHHHC-CCEEEEEEcCccc-chhc--cCceEEEEec
Confidence 666666554 33 33333 2345677886 9999998754332 1111 1466655544
No 144
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=23.16 E-value=3.7e+02 Score=23.32 Aligned_cols=23 Identities=17% Similarity=0.131 Sum_probs=17.6
Q ss_pred hHHHHHHHHHhhCCCcEEEEecCC
Q 014316 20 RMQYQALSLARQMSLEVDVVAYGG 43 (427)
Q Consensus 20 r~~~~a~~La~~~g~~V~vi~~~~ 43 (427)
-....|..|+++ |+.|.++-.+.
T Consensus 19 ~a~~LA~~la~~-g~~VlliD~D~ 41 (260)
T 3q9l_A 19 SSAAIATGLAQK-GKKTVVIDFAI 41 (260)
T ss_dssp HHHHHHHHHHHT-TCCEEEEECCC
T ss_pred HHHHHHHHHHhC-CCcEEEEECCC
Confidence 356677888886 99999997543
No 145
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=23.01 E-value=28 Score=30.25 Aligned_cols=67 Identities=10% Similarity=-0.009 Sum_probs=40.9
Q ss_pred HHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEeccCc-cccceecC-CcEEEe-CChHHHHHHHHHh
Q 014316 356 PLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSC-IEELVKVD-KNGLLF-SSSSELADQLLVN 425 (427)
Q Consensus 356 ~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~~~g-~~e~v~~~-~~G~l~-~~~~~la~~l~~~ 425 (427)
..+...||.+|..+ -+-|-=..+.|++..++||++-+.-+ ...++.+. ...+.+ +|++++.+.|.+.
T Consensus 102 ~~m~~~sda~Ivlp---Gg~GTL~E~~~al~~~kpV~~l~~~~~~~gfi~~~~~~~i~~~~~~~e~~~~l~~~ 171 (176)
T 2iz6_A 102 NINALSSNVLVAVG---MGPGTAAEVALALKAKKPVVLLGTQPEAEKFFTSLDAGLVHVAADVAGAIAAVKQL 171 (176)
T ss_dssp CCCGGGCSEEEEES---CCHHHHHHHHHHHHTTCCEEEESCCHHHHHHHHHHCTTTEEEESSHHHHHHHHHHH
T ss_pred HHHHHhCCEEEEec---CCccHHHHHHHHHHhCCcEEEEcCcccccccCChhhcCeEEEcCCHHHHHHHHHHH
Confidence 34456788887652 22112236888889999999987522 12223222 234444 8899998888764
No 146
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=22.91 E-value=2.8e+02 Score=21.87 Aligned_cols=106 Identities=5% Similarity=0.006 Sum_probs=62.9
Q ss_pred CEEEEEEeCCCC-hHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhc----CcEEEeeccCCCCCCCchHHHHHH---cC
Q 014316 316 RLLFIITGKGPD-KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS----ADLGVCLHTSSSGLDLPMKVVDMF---GC 387 (427)
Q Consensus 316 ~~~l~i~G~G~~-~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~----adi~v~p~~~s~~e~~p~~~lEam---a~ 387 (427)
..+++|+.+.+. .+.+++..++.|..-+.... +.++..+.+.. .|++++= ......-|..+++.+ ..
T Consensus 36 ~~~Ilivdd~~~~~~~l~~~L~~~g~~v~~~~~---~~~~al~~l~~~~~~~dliilD--~~l~~~~g~~~~~~lr~~~~ 110 (157)
T 3hzh_A 36 PFNVLIVDDSVFTVKQLTQIFTSEGFNIIDTAA---DGEEAVIKYKNHYPNIDIVTLX--ITMPKMDGITCLSNIMEFDK 110 (157)
T ss_dssp ECEEEEECSCHHHHHHHHHHHHHTTCEEEEEES---SHHHHHHHHHHHGGGCCEEEEC--SSCSSSCHHHHHHHHHHHCT
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEC---CHHHHHHHHHhcCCCCCEEEEe--ccCCCccHHHHHHHHHhhCC
Confidence 357888886543 34566667776654331223 35666666553 4888762 122233445555554 34
Q ss_pred CCcEEEeccC----ccccceecCCcEEEeC--ChHHHHHHHHHhc
Q 014316 388 GLPVCAVSYS----CIEELVKVDKNGLLFS--SSSELADQLLVNA 426 (427)
Q Consensus 388 G~PVIas~~~----g~~e~v~~~~~G~l~~--~~~~la~~l~~~~ 426 (427)
.+|||..... ...+.++.|..+++.. +.++|.++|..+.
T Consensus 111 ~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~l 155 (157)
T 3hzh_A 111 NARVIMISALGKEQLVKDCLIKGAKTFIVKPLDRAKVLQRVMSVF 155 (157)
T ss_dssp TCCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHTT
T ss_pred CCcEEEEeccCcHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHh
Confidence 6788765422 2344566788899984 5789999887753
No 147
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=22.59 E-value=3.2e+02 Score=25.35 Aligned_cols=70 Identities=14% Similarity=0.077 Sum_probs=45.7
Q ss_pred CCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhc--CcEEEeeccCCCCCCCchHHHHHHcCCCcE
Q 014316 314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS--ADLGVCLHTSSSGLDLPMKVVDMFGCGLPV 391 (427)
Q Consensus 314 ~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~--adi~v~p~~~s~~e~~p~~~lEama~G~PV 391 (427)
.|++.++-+-+ .+.+..++.++++++.++ ..++.+++.. .|++++....... . -.+.+|+.+|++|
T Consensus 46 ~~~~~lvav~d-~~~~~a~~~a~~~g~~~~--------y~d~~ell~~~~iDaV~I~tP~~~H--~-~~~~~al~aGkhV 113 (350)
T 4had_A 46 AENCVVTAIAS-RDLTRAREMADRFSVPHA--------FGSYEEMLASDVIDAVYIPLPTSQH--I-EWSIKAADAGKHV 113 (350)
T ss_dssp CSSEEEEEEEC-SSHHHHHHHHHHHTCSEE--------ESSHHHHHHCSSCSEEEECSCGGGH--H-HHHHHHHHTTCEE
T ss_pred CCCeEEEEEEC-CCHHHHHHHHHHcCCCee--------eCCHHHHhcCCCCCEEEEeCCCchh--H-HHHHHHHhcCCEE
Confidence 56777765544 456778889999886431 3566777764 6888764211211 2 2578999999999
Q ss_pred EEec
Q 014316 392 CAVS 395 (427)
Q Consensus 392 Ias~ 395 (427)
++=.
T Consensus 114 l~EK 117 (350)
T 4had_A 114 VCEK 117 (350)
T ss_dssp EECS
T ss_pred EEeC
Confidence 8753
No 148
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=22.37 E-value=1.4e+02 Score=23.79 Aligned_cols=106 Identities=15% Similarity=0.111 Sum_probs=62.6
Q ss_pred CEEEEEEeCCCC-hHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhc--CcEEEeeccCCCCCCCchHHHHHH-cCCCcE
Q 014316 316 RLLFIITGKGPD-KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS--ADLGVCLHTSSSGLDLPMKVVDMF-GCGLPV 391 (427)
Q Consensus 316 ~~~l~i~G~G~~-~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~--adi~v~p~~~s~~e~~p~~~lEam-a~G~PV 391 (427)
..++.|+=|.+. ...+++..++.|.+-+... -+.++.-+++.. .|+.++ .......-|..+++.+ ..++||
T Consensus 8 ~~rILiVdD~~~~~~~l~~~L~~~G~~v~~~a---~~g~eAl~~~~~~~~Dlvll--Di~mP~~~G~el~~~lr~~~ipv 82 (123)
T 2lpm_A 8 RLRVLVVEDESMIAMLIEDTLCELGHEVAATA---SRMQEALDIARKGQFDIAII--DVNLDGEPSYPVADILAERNVPF 82 (123)
T ss_dssp CCCEEEESSSTTTSHHHHHHHHHHCCCCCBCS---CCHHHHHHHHHHCCSSEEEE--CSSSSSCCSHHHHHHHHHTCCSS
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHCCCEEEEEE---CCHHHHHHHHHhCCCCEEEE--ecCCCCCCHHHHHHHHHcCCCCE
Confidence 467888887654 4667778888876432111 134555555543 577775 2222233445566655 368898
Q ss_pred EEe-ccCccccceecCCcEEEeC--ChHHHHHHHHHhc
Q 014316 392 CAV-SYSCIEELVKVDKNGLLFS--SSSELADQLLVNA 426 (427)
Q Consensus 392 Ias-~~~g~~e~v~~~~~G~l~~--~~~~la~~l~~~~ 426 (427)
|.. ..+......+-+..|++.. +.++|.+.|.++.
T Consensus 83 I~lTa~~~~~~~~~~g~~~yl~KP~~~~~L~~~l~~~~ 120 (123)
T 2lpm_A 83 IFATGYGSKGLDTRYSNIPLLTKPFLDSELEAVLVQIS 120 (123)
T ss_dssp CCBCTTCTTSCCSSSCSCSCBCSSSSHHHHHHHHSTTC
T ss_pred EEEecCccHHHHHhCCCCcEEECCCCHHHHHHHHHHHH
Confidence 754 3444333344566778774 4688988887654
No 149
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=22.29 E-value=88 Score=28.62 Aligned_cols=116 Identities=12% Similarity=-0.007 Sum_probs=59.7
Q ss_pred cceEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCC--cccccCCCceEEEEeecCCCCCCCCcchhhHHHHH
Q 014316 4 RGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKP--HAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLL 81 (427)
Q Consensus 4 ~~~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~--~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~ 81 (427)
|++|+|....++ .++++...+.+|.+. | +|+|+++..++- ...+.-...+++.... ..........+-..-.+
T Consensus 1 Mp~ILlTNDDGi-~apGi~~L~~~l~~~-g-~V~VvAP~~~~Sg~g~siT~~~pl~~~~~~--~~~~~~v~GTPaDCV~l 75 (251)
T 2wqk_A 1 MPTFLLVNDDGY-FSPGINALREALKSL-G-RVVVVAPDRNLSGVGHSLTFTEPLKMRKID--TDFYTVIDGTPADCVHL 75 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTT-S-EEEEEEESSCCTTSCCSCCCSSCEEEEEEE--TTEEEETTCCHHHHHHH
T ss_pred CCEEEEEcCCCC-CcHHHHHHHHHHHhC-C-CEEEEeeCCCCcccccCcCCCCCceeEEee--ccceeecCCChHHHHhh
Confidence 456666555444 678999888888885 6 699999875431 1222223356666655 11000011111111111
Q ss_pred HHHHHHHHHHHHHHHhhhCCCcEEEEcC--------CCChhHHHHHHHHHhhcCCcEEEEe
Q 014316 82 LKPLIQFFMLLWFLCVKIASPDVFLVQN--------PPSVPTLVAVKWASSLRRSAFIVDW 134 (427)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~Dvv~~~~--------p~~~~~~~~~~~~~~~~~~p~i~~~ 134 (427)
.+.. +.+..+||+|++-- --.+.+.+.|.+=+.+.|+|-|.-.
T Consensus 76 --al~~--------~l~~~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S 126 (251)
T 2wqk_A 76 --GYRV--------ILEEKKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFS 126 (251)
T ss_dssp --HHHT--------TTTTCCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEE
T ss_pred --hhhh--------hcCCCCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEE
Confidence 1111 11225899998820 0012344445566778899977643
No 150
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=22.27 E-value=2.7e+02 Score=21.88 Aligned_cols=104 Identities=11% Similarity=0.059 Sum_probs=61.9
Q ss_pred CEEEEEEeCCCC-hHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhc--CcEEEeeccCCCCCCCchHHHHHHc-----C
Q 014316 316 RLLFIITGKGPD-KESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS--ADLGVCLHTSSSGLDLPMKVVDMFG-----C 387 (427)
Q Consensus 316 ~~~l~i~G~G~~-~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~--adi~v~p~~~s~~e~~p~~~lEama-----~ 387 (427)
..+++|+.+.+. .+.+++..++.|. +|.... +.++..+.+.. .|++++= ......-|..+++.+. .
T Consensus 7 ~~~ILivdd~~~~~~~l~~~L~~~g~-~v~~~~---~~~~al~~l~~~~~dlii~D--~~l~~~~g~~~~~~lr~~~~~~ 80 (154)
T 3gt7_A 7 AGEILIVEDSPTQAEHLKHILEETGY-QTEHVR---NGREAVRFLSLTRPDLIISD--VLMPEMDGYALCRWLKGQPDLR 80 (154)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTTTC-EEEEES---SHHHHHHHHTTCCCSEEEEE--SCCSSSCHHHHHHHHHHSTTTT
T ss_pred CCcEEEEeCCHHHHHHHHHHHHHCCC-EEEEeC---CHHHHHHHHHhCCCCEEEEe--CCCCCCCHHHHHHHHHhCCCcC
Confidence 467788876542 3455666666564 343333 36666666654 5777762 1222334556777664 4
Q ss_pred CCcEEEecc-C---ccccceecCCcEEEeC--ChHHHHHHHHHh
Q 014316 388 GLPVCAVSY-S---CIEELVKVDKNGLLFS--SSSELADQLLVN 425 (427)
Q Consensus 388 G~PVIas~~-~---g~~e~v~~~~~G~l~~--~~~~la~~l~~~ 425 (427)
.+|||.... . ...+.++.|..+++.. +.++|.+.|..+
T Consensus 81 ~~pii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~ 124 (154)
T 3gt7_A 81 TIPVILLTILSDPRDVVRSLECGADDFITKPCKDVVLASHVKRL 124 (154)
T ss_dssp TSCEEEEECCCSHHHHHHHHHHCCSEEEESSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHCCCCEEEeCCCCHHHHHHHHHHH
Confidence 678876542 2 2344566788899984 568888877654
No 151
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=22.20 E-value=2.6e+02 Score=21.51 Aligned_cols=65 Identities=8% Similarity=0.060 Sum_probs=0.0
Q ss_pred EEEEeCCCCh----HHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcE
Q 014316 319 FIITGKGPDK----ESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPV 391 (427)
Q Consensus 319 l~i~G~G~~~----~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PV 391 (427)
++++|.|-.. ..+++.+++.|++ .|.-.+ ..++...+..+|++++ +....+-..-++..+..+||
T Consensus 7 ll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~----~~~~~~~~~~~Dvil~----~pqv~~~~~~~~~~~~~~~v 76 (106)
T 1e2b_A 7 YLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFP----ETLAGEKGQNADVVLL----GPQIAYMLPEIQRLLPNKPV 76 (106)
T ss_dssp EEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEEC----SSSTTHHHHHCSEEEE----CTTSGGGHHHHHHHSSSSCC
T ss_pred EEECCCchhHHHHHHHHHHHHHHCCCCeEEEEec----HHHHHhhccCCCEEEE----ccchhhhHHHHHHHhcCCCc
No 152
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=21.91 E-value=2.4e+02 Score=26.70 Aligned_cols=83 Identities=12% Similarity=0.018 Sum_probs=53.1
Q ss_pred CEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCC-------cccHHHHHhcCcEEEeeccCC--CCCCCchHHHHHHc
Q 014316 316 RLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLS-------AEDYPLLLGSADLGVCLHTSS--SGLDLPMKVVDMFG 386 (427)
Q Consensus 316 ~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~-------~~~~~~~l~~adi~v~p~~~s--~~e~~p~~~lEama 386 (427)
.-++-|+|-|.--..+.+.+...|. +|........ ..++.++++.||++++..... ...-+....++.|-
T Consensus 164 g~~vgIIG~G~iG~~vA~~l~~~G~-~V~~~dr~~~~~~g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk 242 (333)
T 3ba1_A 164 GKRVGIIGLGRIGLAVAERAEAFDC-PISYFSRSKKPNTNYTYYGSVVELASNSDILVVACPLTPETTHIINREVIDALG 242 (333)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTTC-CEEEECSSCCTTCCSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCchhccCceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCC
Confidence 3468899998766666666666664 4555442111 246788999999998732111 12334456888998
Q ss_pred CCCcEEEeccCcc
Q 014316 387 CGLPVCAVSYSCI 399 (427)
Q Consensus 387 ~G~PVIas~~~g~ 399 (427)
-|.-+|.+..|..
T Consensus 243 ~gailIn~srG~~ 255 (333)
T 3ba1_A 243 PKGVLINIGRGPH 255 (333)
T ss_dssp TTCEEEECSCGGG
T ss_pred CCCEEEECCCCch
Confidence 8887877766654
No 153
>2d8m_A DNA-repair protein XRCC1; parallel beta-sheet, DNA ligase III, poly(ADP-ribose) polymerase-1, DNA polymerase beta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.68 E-value=3e+02 Score=21.79 Aligned_cols=64 Identities=14% Similarity=0.235 Sum_probs=45.8
Q ss_pred CCCEEEEEEeCC-CChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEE
Q 014316 314 YPRLLFIITGKG-PDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVC 392 (427)
Q Consensus 314 ~~~~~l~i~G~G-~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVI 392 (427)
+.+..|.+.|.- ..++.++++++.+| -.+... ++ ...+.+|+. . .-+.++-.|...|+|||
T Consensus 23 f~g~~i~itG~~~~~r~~l~~~i~~~G---g~v~~~-~s--------~~~ThLI~~----~--~~~~K~~~A~~~gi~IV 84 (129)
T 2d8m_A 23 LQGVVVVLSGFQNPFRSELRDKALELG---AKYRPD-WT--------RDSTHLICA----F--ANTPKYSQVLGLGGRIV 84 (129)
T ss_dssp STTEEEEEESCCTTHHHHHHHHHHHTT---EEEESS-CC--------TTCCEEEES----S--SSCHHHHHHHHHTCEEE
T ss_pred CCCeEEEEeCCCcHHHHHHHHHHHHcC---CEEeCC-cC--------CCCeEEEec----C--CCChHHHHHHHCCCcEe
Confidence 567999999954 45788899999987 334444 32 247777762 2 23568889999999999
Q ss_pred Eec
Q 014316 393 AVS 395 (427)
Q Consensus 393 as~ 395 (427)
.-.
T Consensus 85 ~~~ 87 (129)
T 2d8m_A 85 RKE 87 (129)
T ss_dssp ETH
T ss_pred cHH
Confidence 865
No 154
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=21.41 E-value=2.2e+02 Score=26.88 Aligned_cols=83 Identities=8% Similarity=-0.027 Sum_probs=55.0
Q ss_pred CCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCC--------cccHHHHHhcCcEEEeeccCCC---CCCCchHHHH
Q 014316 315 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLS--------AEDYPLLLGSADLGVCLHTSSS---GLDLPMKVVD 383 (427)
Q Consensus 315 ~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~--------~~~~~~~l~~adi~v~p~~~s~---~e~~p~~~lE 383 (427)
..-++-|+|-|.--..+.+.++.+|. +|.......+ ..++.++++.||++++. .+.. ..-+....++
T Consensus 144 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~~~-~P~~~~t~~li~~~~l~ 221 (333)
T 1dxy_A 144 GQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYPMKGDHPDFDYVSLEDLFKQSDVIDLH-VPGIEQNTHIINEAAFN 221 (333)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSSCCTTCEECCHHHHHHHCSEEEEC-CCCCGGGTTSBCHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCcchhhHhccccCCHHHHHhcCCEEEEc-CCCchhHHHHhCHHHHh
Confidence 34578899998766677777777775 3444332111 23678999999999872 2221 1234567899
Q ss_pred HHcCCCcEEEeccCcc
Q 014316 384 MFGCGLPVCAVSYSCI 399 (427)
Q Consensus 384 ama~G~PVIas~~~g~ 399 (427)
.|.-|.-+|-+..|++
T Consensus 222 ~mk~ga~lIn~srg~~ 237 (333)
T 1dxy_A 222 LMKPGAIVINTARPNL 237 (333)
T ss_dssp HSCTTEEEEECSCTTS
T ss_pred hCCCCcEEEECCCCcc
Confidence 9999988887776664
No 155
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=21.37 E-value=2.1e+02 Score=27.64 Aligned_cols=84 Identities=17% Similarity=0.150 Sum_probs=53.5
Q ss_pred CCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCC----------CcccHHHHHhcCcEEEee--ccCCCCCCCchHHH
Q 014316 315 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWL----------SAEDYPLLLGSADLGVCL--HTSSSGLDLPMKVV 382 (427)
Q Consensus 315 ~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~----------~~~~~~~~l~~adi~v~p--~~~s~~e~~p~~~l 382 (427)
..-++-|+|-|.--..+.+.++.+|. +|....... ...++.++++.||++++. .+.....-+....+
T Consensus 175 ~gktvGIIGlG~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~Plt~~T~~li~~~~l 253 (365)
T 4hy3_A 175 AGSEIGIVGFGDLGKALRRVLSGFRA-RIRVFDPWLPRSMLEENGVEPASLEDVLTKSDFIFVVAAVTSENKRFLGAEAF 253 (365)
T ss_dssp SSSEEEEECCSHHHHHHHHHHTTSCC-EEEEECSSSCHHHHHHTTCEECCHHHHHHSCSEEEECSCSSCC---CCCHHHH
T ss_pred CCCEEEEecCCcccHHHHHhhhhCCC-EEEEECCCCCHHHHhhcCeeeCCHHHHHhcCCEEEEcCcCCHHHHhhcCHHHH
Confidence 34578999988765666666666664 455544311 123578899999999862 11112234566788
Q ss_pred HHHcCCCcEEEeccCcc
Q 014316 383 DMFGCGLPVCAVSYSCI 399 (427)
Q Consensus 383 Eama~G~PVIas~~~g~ 399 (427)
+.|--|.-+|-+..|++
T Consensus 254 ~~mk~gailIN~aRG~~ 270 (365)
T 4hy3_A 254 SSMRRGAAFILLSRADV 270 (365)
T ss_dssp HTSCTTCEEEECSCGGG
T ss_pred hcCCCCcEEEECcCCch
Confidence 88888888887776653
No 156
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=21.32 E-value=5.2e+02 Score=25.00 Aligned_cols=86 Identities=9% Similarity=-0.026 Sum_probs=54.2
Q ss_pred CCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCC-------------------------------------CcccHHH
Q 014316 315 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWL-------------------------------------SAEDYPL 357 (427)
Q Consensus 315 ~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~-------------------------------------~~~~~~~ 357 (427)
+..++.|+|.|.--....+.++.+|. +|....... ..+++.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e 261 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED 261 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence 45789999999755555666666665 344433200 0135668
Q ss_pred HHhcCcEEEeec-cCC--CCCCCchHHHHHHcCCCcEEEec--cCcccc
Q 014316 358 LLGSADLGVCLH-TSS--SGLDLPMKVVDMFGCGLPVCAVS--YSCIEE 401 (427)
Q Consensus 358 ~l~~adi~v~p~-~~s--~~e~~p~~~lEama~G~PVIas~--~~g~~e 401 (427)
.++.+|+++... .+. ...-+...+++.|.-|.-+|-.. .||.-|
T Consensus 262 ~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e 310 (381)
T 3p2y_A 262 AITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNCE 310 (381)
T ss_dssp HHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBT
T ss_pred HHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCccc
Confidence 899999998631 111 11225568899999998887554 667666
No 157
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=21.28 E-value=3.3e+02 Score=25.31 Aligned_cols=85 Identities=13% Similarity=0.001 Sum_probs=54.2
Q ss_pred CCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCC----------cccHHHHHhcCcEEEeeccCC--CCCCCchHH
Q 014316 314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLS----------AEDYPLLLGSADLGVCLHTSS--SGLDLPMKV 381 (427)
Q Consensus 314 ~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~----------~~~~~~~l~~adi~v~p~~~s--~~e~~p~~~ 381 (427)
...-++-|+|-|.--..+-+.++..|. +|.......+ ..++.++++.||++++....+ ...-+....
T Consensus 140 l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvVvl~~P~~~~t~~li~~~~ 218 (313)
T 2ekl_A 140 LAGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDILDIREKAEKINAKAVSLEELLKNSDVISLHVTVSKDAKPIIDYPQ 218 (313)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCCCTTSCCSBCHHH
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCcchhHHHhcCceecCHHHHHhhCCEEEEeccCChHHHHhhCHHH
Confidence 445678999998766667667777664 4554443111 125678899999998732111 113344568
Q ss_pred HHHHcCCCcEEEeccCcc
Q 014316 382 VDMFGCGLPVCAVSYSCI 399 (427)
Q Consensus 382 lEama~G~PVIas~~~g~ 399 (427)
++.|.-|.-+|.+..|++
T Consensus 219 l~~mk~ga~lIn~arg~~ 236 (313)
T 2ekl_A 219 FELMKDNVIIVNTSRAVA 236 (313)
T ss_dssp HHHSCTTEEEEESSCGGG
T ss_pred HhcCCCCCEEEECCCCcc
Confidence 888988887887766654
No 158
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=21.22 E-value=2.7e+02 Score=21.00 Aligned_cols=104 Identities=11% Similarity=0.114 Sum_probs=63.3
Q ss_pred EEEEEEeCCC-ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHH-h--cCcEEEeeccCCCCCCCchHHHHHHcC-----
Q 014316 317 LLFIITGKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLL-G--SADLGVCLHTSSSGLDLPMKVVDMFGC----- 387 (427)
Q Consensus 317 ~~l~i~G~G~-~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l-~--~adi~v~p~~~s~~e~~p~~~lEama~----- 387 (427)
.++.|+.+.+ ..+.+++..++.|...|..... ..+....+ . ..|++++ .......-|..+++.+..
T Consensus 6 ~~iLivdd~~~~~~~l~~~L~~~g~~~v~~~~~---~~~a~~~~~~~~~~dlvi~--D~~~p~~~g~~~~~~lr~~~~~~ 80 (129)
T 3h1g_A 6 MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEH---GVEAWEKLDANADTKVLIT--DWNMPEMNGLDLVKKVRSDSRFK 80 (129)
T ss_dssp CCEEEECSCHHHHHHHHHHHHHTTCCCEEEESS---HHHHHHHHHHCTTCCEEEE--CSCCSSSCHHHHHHHHHTSTTCT
T ss_pred cEEEEEeCCHHHHHHHHHHHHHcCCcEEEEeCC---HHHHHHHHHhCCCCCEEEE--eCCCCCCCHHHHHHHHHhcCCCC
Confidence 5677887654 3355667777777655554443 44444444 2 3677775 112223446677777643
Q ss_pred CCcEEEec-cCc---cccceecCCcEEEeC--ChHHHHHHHHHh
Q 014316 388 GLPVCAVS-YSC---IEELVKVDKNGLLFS--SSSELADQLLVN 425 (427)
Q Consensus 388 G~PVIas~-~~g---~~e~v~~~~~G~l~~--~~~~la~~l~~~ 425 (427)
.+|||... ... ..+.++.|-.+++.. +.++|.++|...
T Consensus 81 ~~pii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~l~~~ 124 (129)
T 3h1g_A 81 EIPIIMITAEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEVV 124 (129)
T ss_dssp TCCEEEEESCCSHHHHHHHHHHTCCEEEESCCCHHHHHHHHHHH
T ss_pred CCeEEEEeCCCChHHHHHHHHcCccEEEeCCCCHHHHHHHHHHH
Confidence 57887654 332 244566788999994 578899888765
No 159
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=21.19 E-value=2.1e+02 Score=27.51 Aligned_cols=71 Identities=10% Similarity=0.009 Sum_probs=43.8
Q ss_pred CCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhc-------CcEEEeeccCCCCCCCchHHHHHHcC
Q 014316 315 PRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGS-------ADLGVCLHTSSSGLDLPMKVVDMFGC 387 (427)
Q Consensus 315 ~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~-------adi~v~p~~~s~~e~~p~~~lEama~ 387 (427)
+++.++-+=-..+.+..++.++++|+..... ..++.+++.. .|++++....... .-.+.+|+.+
T Consensus 38 ~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~------~~~~~~ll~~~~~~~~~vD~V~i~tp~~~H---~~~~~~al~a 108 (398)
T 3dty_A 38 NTFVLVAGAFDIDPIRGSAFGEQLGVDSERC------YADYLSMFEQEARRADGIQAVSIATPNGTH---YSITKAALEA 108 (398)
T ss_dssp GSEEEEEEECCSSHHHHHHHHHHTTCCGGGB------CSSHHHHHHHHTTCTTCCSEEEEESCGGGH---HHHHHHHHHT
T ss_pred CCeEEEEEEeCCCHHHHHHHHHHhCCCccee------eCCHHHHHhcccccCCCCCEEEECCCcHHH---HHHHHHHHHC
Confidence 3455542113456777888888887642111 4566777765 8998774111111 2357899999
Q ss_pred CCcEEEe
Q 014316 388 GLPVCAV 394 (427)
Q Consensus 388 G~PVIas 394 (427)
|++|++-
T Consensus 109 GkhVl~E 115 (398)
T 3dty_A 109 GLHVVCE 115 (398)
T ss_dssp TCEEEEC
T ss_pred CCeEEEe
Confidence 9999974
No 160
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=21.09 E-value=2.1e+02 Score=25.91 Aligned_cols=76 Identities=8% Similarity=0.052 Sum_probs=43.8
Q ss_pred EEEEEe-CCCChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHh-cCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEec
Q 014316 318 LFIITG-KGPDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLG-SADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVS 395 (427)
Q Consensus 318 ~l~i~G-~G~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~-~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas~ 395 (427)
++.++| .|..-..+.+.+.+.. ...+.+..-..+++.+++. .+|+.|-. +..+..-.-+..+...|+|+|...
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~--~~elva~~d~~~dl~~~~~~~~DvvIDf---T~p~a~~~~~~~a~~~g~~~VigT 76 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAAD--DLTLSAELDAGDPLSLLTDGNTEVVIDF---THPDVVMGNLEFLIDNGIHAVVGT 76 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCT--TCEEEEEECTTCCTHHHHHTTCCEEEEC---SCTTTHHHHHHHHHHTTCEEEECC
T ss_pred EEEEECCCCHHHHHHHHHHHhCC--CCEEEEEEccCCCHHHHhccCCcEEEEc---cChHHHHHHHHHHHHcCCCEEEcC
Confidence 578888 4765555655555431 2233332112456666665 79998842 333334333446688999998865
Q ss_pred cCc
Q 014316 396 YSC 398 (427)
Q Consensus 396 ~~g 398 (427)
.|-
T Consensus 77 TG~ 79 (245)
T 1p9l_A 77 TGF 79 (245)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 161
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=20.97 E-value=1.9e+02 Score=28.24 Aligned_cols=72 Identities=7% Similarity=-0.067 Sum_probs=44.0
Q ss_pred CCCEEEEEEeCCCChHHHHHHHHHcCCCc--EEEecCCCCcccHHHHHh--cCcEEEeeccCCCCCCCchHHHHHHcCCC
Q 014316 314 YPRLLFIITGKGPDKESYEEKIRRLRLKR--VAFRTMWLSAEDYPLLLG--SADLGVCLHTSSSGLDLPMKVVDMFGCGL 389 (427)
Q Consensus 314 ~~~~~l~i~G~G~~~~~~~~~~~~l~l~~--V~f~g~~~~~~~~~~~l~--~adi~v~p~~~s~~e~~p~~~lEama~G~ 389 (427)
.+++.++-+-+ .+.+..++.+++++... +.. .+++.+++. ..|++++. +....-.-.+.+++.+|+
T Consensus 106 ~~~~~lvav~d-~~~~~~~~~a~~~g~~~~~~~~------~~~~~~ll~~~~vD~V~ia---tp~~~h~~~~~~al~aGk 175 (433)
T 1h6d_A 106 CQHSRIEALVS-GNAEKAKIVAAEYGVDPRKIYD------YSNFDKIAKDPKIDAVYII---LPNSLHAEFAIRAFKAGK 175 (433)
T ss_dssp CSSEEEEEEEC-SCHHHHHHHHHHTTCCGGGEEC------SSSGGGGGGCTTCCEEEEC---SCGGGHHHHHHHHHHTTC
T ss_pred CCCcEEEEEEc-CCHHHHHHHHHHhCCCcccccc------cCCHHHHhcCCCCCEEEEc---CCchhHHHHHHHHHHCCC
Confidence 35666654443 34566777888877642 332 334555666 68998874 222122346778999999
Q ss_pred cEEEec
Q 014316 390 PVCAVS 395 (427)
Q Consensus 390 PVIas~ 395 (427)
+|+.-.
T Consensus 176 ~Vl~EK 181 (433)
T 1h6d_A 176 HVMCEK 181 (433)
T ss_dssp EEEECS
T ss_pred cEEEcC
Confidence 998754
No 162
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=20.78 E-value=1.5e+02 Score=28.09 Aligned_cols=36 Identities=17% Similarity=0.056 Sum_probs=18.2
Q ss_pred CCCcceEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecC
Q 014316 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYG 42 (427)
Q Consensus 1 ~~~~~~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~ 42 (427)
|+++.+++++-..+| ......+|.+. ||+|..+...
T Consensus 4 m~~~mrivf~Gt~~f-----a~~~L~~L~~~-~~~v~~Vvt~ 39 (318)
T 3q0i_A 4 MSQSLRIVFAGTPDF-----AARHLAALLSS-EHEIIAVYTQ 39 (318)
T ss_dssp ---CCEEEEECCSHH-----HHHHHHHHHTS-SSEEEEEECC
T ss_pred cccCCEEEEEecCHH-----HHHHHHHHHHC-CCcEEEEEcC
Confidence 555555555433322 23334677775 8998765543
No 163
>3al2_A DNA topoisomerase 2-binding protein 1; BRCT domain, protein binding, DNA binding protein; HET: DNA MSE; 2.00A {Homo sapiens} PDB: 3al3_A*
Probab=20.76 E-value=40 Score=30.53 Aligned_cols=65 Identities=14% Similarity=0.030 Sum_probs=43.3
Q ss_pred CEEEEEEeCC-CChHHHHHHHHHcCCCcEEEecCCCCcccHHHHHhcCcEEEeeccCCCCCCCchHHHHHHcCCCcEEEe
Q 014316 316 RLLFIITGKG-PDKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLLGSADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV 394 (427)
Q Consensus 316 ~~~l~i~G~G-~~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~lEama~G~PVIas 394 (427)
..+|.+.|-. ..++.+++.++++|.. +.. .+ .+-..++-+|++ ... -..|++.|+|+|++||+.
T Consensus 9 ~~~~~~Sg~~~~~~~~l~~~i~~LGg~---~~~----~~---~~~~~~THlV~~---~~~--RT~K~l~aia~G~wIvs~ 73 (235)
T 3al2_A 9 QYIFQLSSLNPQERIDYCHLIEKLGGL---VIE----KQ---CFDPTCTHIVVG---HPL--RNEKYLASVAAGKWVLHR 73 (235)
T ss_dssp CCEEEEESCCHHHHHHHHHHHHHTTCE---ECC----SS---SCCTTCCEEEES---SCC--CSHHHHHHHHTTCEEECT
T ss_pred CEEEEEcCCCHHHHHHHHHHHHHcCCE---Eec----cC---CCCCCCcEEEEC---CCC--CCHHHHHHHHcCCcCccH
Confidence 5778888844 3456788888988731 111 11 112567888874 222 266999999999999997
Q ss_pred c
Q 014316 395 S 395 (427)
Q Consensus 395 ~ 395 (427)
+
T Consensus 74 ~ 74 (235)
T 3al2_A 74 S 74 (235)
T ss_dssp H
T ss_pred H
Confidence 6
No 164
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=20.69 E-value=1.3e+02 Score=27.90 Aligned_cols=46 Identities=20% Similarity=0.267 Sum_probs=26.9
Q ss_pred ceEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEE
Q 014316 5 GRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHT 60 (427)
Q Consensus 5 ~~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~ 60 (427)
+++.|+-.|.+| . ..+..|++. |++|++++... . +.....|+++..
T Consensus 3 mkI~IiGaGaiG---~--~~a~~L~~~-g~~V~~~~r~~---~-~~i~~~g~~~~~ 48 (312)
T 3hn2_A 3 LRIAIVGAGALG---L--YYGALLQRS-GEDVHFLLRRD---Y-EAIAGNGLKVFS 48 (312)
T ss_dssp -CEEEECCSTTH---H--HHHHHHHHT-SCCEEEECSTT---H-HHHHHTCEEEEE
T ss_pred CEEEEECcCHHH---H--HHHHHHHHC-CCeEEEEEcCc---H-HHHHhCCCEEEc
Confidence 456666555443 2 335677885 99999997542 2 333344766654
No 165
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=20.68 E-value=2.7e+02 Score=20.89 Aligned_cols=104 Identities=13% Similarity=0.007 Sum_probs=62.3
Q ss_pred EEEEEEeCCC-ChHHHHHHHHHcCCC-cEEEecCCCCcccHHHHHhc---------CcEEEeeccCCCCCCCchHHHHHH
Q 014316 317 LLFIITGKGP-DKESYEEKIRRLRLK-RVAFRTMWLSAEDYPLLLGS---------ADLGVCLHTSSSGLDLPMKVVDMF 385 (427)
Q Consensus 317 ~~l~i~G~G~-~~~~~~~~~~~l~l~-~V~f~g~~~~~~~~~~~l~~---------adi~v~p~~~s~~e~~p~~~lEam 385 (427)
.+++|+.+.+ ....+++..++.|.. .|..... .++....+.. .|++++= ......-|..+++.+
T Consensus 3 ~~ilivdd~~~~~~~l~~~L~~~~~~~~v~~~~~---~~~a~~~l~~~~~~~~~~~~dlvi~d--~~~~~~~g~~~~~~l 77 (140)
T 1k68_A 3 KKIFLVEDNKADIRLIQEALANSTVPHEVVTVRD---GMEAMAYLRQEGEYANASRPDLILLX--LNLPKKDGREVLAEI 77 (140)
T ss_dssp CEEEEECCCHHHHHHHHHHHHTCSSCCEEEEECS---HHHHHHHHTTCGGGGSCCCCSEEEEC--SSCSSSCHHHHHHHH
T ss_pred CeEEEEeCCHHHHHHHHHHHHhcCCCceEEEECC---HHHHHHHHHcccccccCCCCcEEEEe--cCCCcccHHHHHHHH
Confidence 4567777654 234566667766653 4555443 6777777664 7888761 122233445666665
Q ss_pred c-----CCCcEEEecc-C---ccccceecCCcEEEeC--ChHHHHHHHHHh
Q 014316 386 G-----CGLPVCAVSY-S---CIEELVKVDKNGLLFS--SSSELADQLLVN 425 (427)
Q Consensus 386 a-----~G~PVIas~~-~---g~~e~v~~~~~G~l~~--~~~~la~~l~~~ 425 (427)
. ..+|+|.... . ...+.++.|..+++.. +.++|.+.|...
T Consensus 78 ~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~ 128 (140)
T 1k68_A 78 KSDPTLKRIPVVVLSTSINEDDIFHSYDLHVNCYITKSANLSQLFQIVKGI 128 (140)
T ss_dssp HHSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHH
T ss_pred HcCcccccccEEEEecCCcHHHHHHHHHhchhheecCCCCHHHHHHHHHHH
Confidence 4 4678775542 2 2344556688899884 568888877654
No 166
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=20.54 E-value=3.2e+02 Score=21.57 Aligned_cols=114 Identities=11% Similarity=0.066 Sum_probs=61.2
Q ss_pred HHHHHHHhhCCCcEEEEecCCCCCcccccCCCceEEEEeecCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhhCCC
Q 014316 23 YQALSLARQMSLEVDVVAYGGSKPHAAILEHPSIHIHTMTQWPTIPRGLPKVLKPVLLLLKPLIQFFMLLWFLCVKIASP 102 (427)
Q Consensus 23 ~~a~~La~~~g~~V~vi~~~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (427)
..+..|.+. |++|.++....+. .+.....|+.++.-. .. ....+.. . ...+.
T Consensus 21 ~la~~L~~~-g~~v~vid~~~~~--~~~~~~~g~~~i~gd--~~-------~~~~l~~----a------------~i~~a 72 (140)
T 3fwz_A 21 LLGEKLLAS-DIPLVVIETSRTR--VDELRERGVRAVLGN--AA-------NEEIMQL----A------------HLECA 72 (140)
T ss_dssp HHHHHHHHT-TCCEEEEESCHHH--HHHHHHTTCEEEESC--TT-------SHHHHHH----T------------TGGGC
T ss_pred HHHHHHHHC-CCCEEEEECCHHH--HHHHHHcCCCEEECC--CC-------CHHHHHh----c------------CcccC
Confidence 445677775 9999999865432 112223477665544 11 1111110 0 12579
Q ss_pred cEEEEcCCCChhHHHHHHHHHhh-cCCcEEEEecccchhhhhhhcCCCchHHHHHHHHHHHHhccCCEEEEcCHHHHHHH
Q 014316 103 DVFLVQNPPSVPTLVAVKWASSL-RRSAFIVDWHNFGYTLLSLSLGRRSHFVSIYRWIEKYYGKMANGCLCVTQAMQHEL 181 (427)
Q Consensus 103 Dvv~~~~p~~~~~~~~~~~~~~~-~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~vi~vS~~~~~~l 181 (427)
|++++..+.......++..++.+ .+.++|...++..+ ...+++ --+|.++...+.+...+
T Consensus 73 d~vi~~~~~~~~n~~~~~~a~~~~~~~~iiar~~~~~~----------------~~~l~~---~G~d~vi~p~~~~a~~i 133 (140)
T 3fwz_A 73 KWLILTIPNGYEAGEIVASARAKNPDIEIIARAHYDDE----------------VAYITE---RGANQVVMGEREIARTM 133 (140)
T ss_dssp SEEEECCSCHHHHHHHHHHHHHHCSSSEEEEEESSHHH----------------HHHHHH---TTCSEEEEHHHHHHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHHHCCCCeEEEEECCHHH----------------HHHHHH---CCCCEEECchHHHHHHH
Confidence 99988775544444444444444 35566665554421 011111 24888988877777766
Q ss_pred HH
Q 014316 182 AQ 183 (427)
Q Consensus 182 ~~ 183 (427)
.+
T Consensus 134 ~~ 135 (140)
T 3fwz_A 134 LE 135 (140)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 167
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=20.36 E-value=75 Score=27.23 Aligned_cols=43 Identities=12% Similarity=0.008 Sum_probs=24.0
Q ss_pred CCCcceEEEEEeCCCCCChhHHHHHHHHHhhCCCcEEEEecCCC
Q 014316 1 MGRRGRACVVVLGDLGRSPRMQYQALSLARQMSLEVDVVAYGGS 44 (427)
Q Consensus 1 ~~~~~~~~v~~~~~~~~~~r~~~~a~~La~~~g~~V~vi~~~~~ 44 (427)
|++.++++++..++--...-+..-...|.+ .|++|++++....
T Consensus 4 m~~t~~~v~il~~~gFe~~E~~~p~~~l~~-ag~~V~~~s~~~~ 46 (177)
T 4hcj_A 4 MGKTNNILYVMSGQNFQDEEYFESKKIFES-AGYKTKVSSTFIG 46 (177)
T ss_dssp -CCCCEEEEECCSEEECHHHHHHHHHHHHH-TTCEEEEEESSSE
T ss_pred cccCCCEEEEECCCCccHHHHHHHHHHHHH-CCCEEEEEECCCC
Confidence 777766665555432111122223345566 4999999987643
No 168
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=20.16 E-value=4.1e+02 Score=24.54 Aligned_cols=85 Identities=12% Similarity=-0.003 Sum_probs=54.4
Q ss_pred CCCEEEEEEeCCCChHHHHHHHHHcCCCcEEEecCCCC----------cccHHHHHhcCcEEEeeccC-CCC-CCCchHH
Q 014316 314 YPRLLFIITGKGPDKESYEEKIRRLRLKRVAFRTMWLS----------AEDYPLLLGSADLGVCLHTS-SSG-LDLPMKV 381 (427)
Q Consensus 314 ~~~~~l~i~G~G~~~~~~~~~~~~l~l~~V~f~g~~~~----------~~~~~~~l~~adi~v~p~~~-s~~-e~~p~~~ 381 (427)
...-++-|+|-|.--..+.+.++.+|. +|.......+ ..++.++++.||++++.... ... .-+....
T Consensus 140 l~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~g~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~ 218 (307)
T 1wwk_A 140 LEGKTIGIIGFGRIGYQVAKIANALGM-NILLYDPYPNEERAKEVNGKFVDLETLLKESDVVTIHVPLVESTYHLINEER 218 (307)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHTTCEECCHHHHHHHCSEEEECCCCSTTTTTCBCHHH
T ss_pred cCCceEEEEccCHHHHHHHHHHHHCCC-EEEEECCCCChhhHhhcCccccCHHHHHhhCCEEEEecCCChHHhhhcCHHH
Confidence 445678899998766677777777764 4554443111 12567889999999872111 112 3344568
Q ss_pred HHHHcCCCcEEEeccCcc
Q 014316 382 VDMFGCGLPVCAVSYSCI 399 (427)
Q Consensus 382 lEama~G~PVIas~~~g~ 399 (427)
++.|.-|.-+|-+..|++
T Consensus 219 l~~mk~ga~lin~arg~~ 236 (307)
T 1wwk_A 219 LKLMKKTAILINTSRGPV 236 (307)
T ss_dssp HHHSCTTCEEEECSCGGG
T ss_pred HhcCCCCeEEEECCCCcc
Confidence 888988888887766654
No 169
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=20.13 E-value=2.8e+02 Score=20.83 Aligned_cols=105 Identities=11% Similarity=0.029 Sum_probs=59.6
Q ss_pred EEEEEEeCCC-ChHHHHHHHHHcCCCcEEEecCCCCcccHHHHH--hcCcEEEeeccCCCCCCCchHHHHHHc---CCCc
Q 014316 317 LLFIITGKGP-DKESYEEKIRRLRLKRVAFRTMWLSAEDYPLLL--GSADLGVCLHTSSSGLDLPMKVVDMFG---CGLP 390 (427)
Q Consensus 317 ~~l~i~G~G~-~~~~~~~~~~~l~l~~V~f~g~~~~~~~~~~~l--~~adi~v~p~~~s~~e~~p~~~lEama---~G~P 390 (427)
+++.|+.+.+ ..+.+++..++.|..-+.... +.++....+ ...|+.++= ......-|..+++.+. ...|
T Consensus 2 ~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~---~~~~a~~~~~~~~~dlii~d--~~l~~~~g~~~~~~l~~~~~~~~ 76 (134)
T 3f6c_A 2 LNAIIIDDHPLAIAAIRNLLIKNDIEILAELT---EGGSAVQRVETLKPDIVIID--VDIPGVNGIQVLETLRKRQYSGI 76 (134)
T ss_dssp EEEEEECCCHHHHHHHHHHHHHTTEEEEEEES---SSTTHHHHHHHHCCSEEEEE--TTCSSSCHHHHHHHHHHTTCCSE
T ss_pred eEEEEEcCCHHHHHHHHHHHhhCCcEEEEEcC---CHHHHHHHHHhcCCCEEEEe--cCCCCCChHHHHHHHHhcCCCCe
Confidence 4677777654 235566666766633331223 255555544 346777762 1222334555665543 4667
Q ss_pred EEEecc-C---ccccceecCCcEEEeC--ChHHHHHHHHHhc
Q 014316 391 VCAVSY-S---CIEELVKVDKNGLLFS--SSSELADQLLVNA 426 (427)
Q Consensus 391 VIas~~-~---g~~e~v~~~~~G~l~~--~~~~la~~l~~~~ 426 (427)
+|.... . ...+.++.|..+++.. +.++|.++|....
T Consensus 77 ii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~ 118 (134)
T 3f6c_A 77 IIIVSAKNDHFYGKHCADAGANGFVSKKEGMNNIIAAIEAAK 118 (134)
T ss_dssp EEEEECC---CTHHHHHHTTCSEEEEGGGCTHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHhCCCEEEeCCCCHHHHHHHHHHHH
Confidence 775432 2 3345566788899983 5688988887653
No 170
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=20.03 E-value=99 Score=27.97 Aligned_cols=42 Identities=12% Similarity=0.063 Sum_probs=25.0
Q ss_pred CcccHHHHHhcCcEEEeeccCCCCCCCchHHH--HHHcCCCcEEEecc
Q 014316 351 SAEDYPLLLGSADLGVCLHTSSSGLDLPMKVV--DMFGCGLPVCAVSY 396 (427)
Q Consensus 351 ~~~~~~~~l~~adi~v~p~~~s~~e~~p~~~l--Eama~G~PVIas~~ 396 (427)
+.+++.+++..+|++|... ...+. ...+ .+...|+|.|....
T Consensus 108 ~~~~~~~~~~~~DvVi~~~--d~~~~--r~~l~~~~~~~~~p~i~~~~ 151 (251)
T 1zud_1 108 TGEALKDAVARADVVLDCT--DNMAT--RQEINAACVALNTPLITASA 151 (251)
T ss_dssp CHHHHHHHHHHCSEEEECC--SSHHH--HHHHHHHHHHTTCCEEEEEE
T ss_pred CHHHHHHHHhcCCEEEECC--CCHHH--HHHHHHHHHHhCCCEEEEec
Confidence 3456677889999999631 11111 1222 23347999998764
Done!