Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>014318
MRLPAARSGGGLGIAAMSYILIDYLRHLSPAWHARLQPVLWTVLALIAITRVPYYRHWTA
EFRAAIPFVGSMIFMLSALLFEALSVRFATAVLGLDWHSDTDPLPDTGQWLLLALNEKLP
GTIVQILRARIIGLHHFLMLFMMLAFSVLFDSVEAPGLGLGARYMFTMAVGRLLRAITFV
STILPSARPWCVSARFRVPAYPHYWAQKYYVPYASDASAIRQIINQDMAYADVGNYPSDY
RLDWGSMSFLIDFLRPTASEGSSWFSLLKKAGGGCNDLIYSGHMLVAVLTAMAWTEAYGG
FSSALVWLLVMHSAQREVRERHHYSVDCIVAIYVGILLWKMTGFIWPLKDASKSKRLNKL
DKIQSRLLQAAKDSDMDKVTELLKEVEPGGQETQNKGPIKGLWLFACAIIFFALTIVVLA
FTLTSDG

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  014318
        (427 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2194671 - symbol:AT1G43580 "AT1G43580" species...  1541  3.7e-158  1


>TAIR|locus:2194671 [details] [associations]
            symbol:AT1G43580 "AT1G43580" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0000394
            "RNA splicing, via endonucleolytic cleavage and ligation"
            evidence=RCA] [GO:0009086 "methionine biosynthetic process"
            evidence=RCA] EMBL:CP002684 GO:GO:0009506 InterPro:IPR025749
            Pfam:PF14360 EMBL:AC007203 EMBL:AY090374 IPI:IPI00532939 PIR:C96499
            RefSeq:NP_564484.1 UniGene:At.38977 PRIDE:Q9XIG2
            EnsemblPlants:AT1G43580.1 GeneID:840942 KEGG:ath:AT1G43580
            TAIR:At1g43580 InParanoid:Q9XIG2 OMA:IMLGFSV PhylomeDB:Q9XIG2
            ProtClustDB:CLSN2688424 Genevestigator:Q9XIG2 Uniprot:Q9XIG2
        Length = 421

 Score = 1541 (547.5 bits), Expect = 3.7e-158, P = 3.7e-158
 Identities = 290/421 (68%), Positives = 345/421 (81%)

Query:    10 GGLGIAAMSYILIDYLRHLSPAWHARLQPVLWTVLALIAITRVPYYRHWTAEFRAAIPFV 69
             GGLGIAAMSY++IDY+R++SP WH+RL PVLW+VLA+  +TRV +Y+HW+ E RAAIPF+
Sbjct:     4 GGLGIAAMSYVVIDYMRYVSPVWHSRLMPVLWSVLAIAVVTRVLFYKHWSKELRAAIPFL 63

Query:    70 GSMIFMLSALLFEALSVRFATAVLGLDWHSDTDPLPDTGQWLLLALNEKLPGTIVQILRA 129
             GS++F+L ALLFEAL VR  TAVLGLDWH +T PLPDTGQW LLALNE LPGT+V+ILRA
Sbjct:    64 GSIVFLLCALLFEALCVRSVTAVLGLDWHRETPPLPDTGQWFLLALNESLPGTLVEILRA 123

Query:   130 RIIGXXXXXXXXXXXAFSVLFDSVEAPGLGLGARYMFTMAVGRLLRAITFVSTILPSARP 189
              IIG            FSV+FDSV+APGLGLGARY+FTM VGRLLRAITFVSTILPSARP
Sbjct:   124 HIIGLHHFLMLFIMLGFSVVFDSVKAPGLGLGARYIFTMGVGRLLRAITFVSTILPSARP 183

Query:   190 WCVSARFR-VPAYPHYWAQKYYVPYASDASAIRQIINQDMAYADVGNYPSDYRLDWGSMS 248
             WC SARF  VP+ PH WAQKYYVPYA+D +AIR++++ D AYAD G+Y  DYR DWGSMS
Sbjct:   184 WCASARFNNVPSQPHRWAQKYYVPYANDPAAIRKLLHWDAAYADPGSYIGDYRADWGSMS 243

Query:   249 FLIDFLRPTASEGSSWFSLLKKAGGGCNDLIYSGHMLVAVLTAMAWTEAYGGFSSALVWL 308
             FL +FLRP+ SEGSSWF+LLKKAGGGCNDL+YSGHMLVAVLTAMAWTEAYGGFSSA++WL
Sbjct:   244 FLSEFLRPSYSEGSSWFALLKKAGGGCNDLMYSGHMLVAVLTAMAWTEAYGGFSSAMIWL 303

Query:   309 LVMHSAQREVRERHHYSVDCIVAIYVGILLWKMTGFIWPLKDASKSKRLNKLDKIQSRLL 368
              V HSAQRE+RERHHY+VDCIVAIYVGILLWKMTGFIW    A +  +  KL+KIQ+ L+
Sbjct:   304 FVAHSAQREIRERHHYTVDCIVAIYVGILLWKMTGFIW---SAERKTKQTKLEKIQNSLI 360

Query:   369 QAAKDSDMDKVTELLKEVEPGGQ-ETQNKG-PIKGLWLFACAIIFFALTIVVLAFTLTSD 426
              AAKD D++ V  L++E+E   + E Q+K    + + +FACA +   LTIV+LA TLTSD
Sbjct:   361 HAAKDGDIETVRRLVEEIEVSSRVEKQSKVISNRTMTVFACATVITTLTIVILALTLTSD 420

Query:   427 G 427
             G
Sbjct:   421 G 421


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.138   0.438    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      427       416   0.00081  118 3  11 22  0.45    33
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  628 (67 KB)
  Total size of DFA:  275 KB (2142 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  31.78u 0.22s 32.00t   Elapsed:  00:00:02
  Total cpu time:  31.78u 0.22s 32.00t   Elapsed:  00:00:02
  Start:  Fri May 10 13:33:09 2013   End:  Fri May 10 13:33:11 2013

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