Query 014318
Match_columns 427
No_of_seqs 147 out of 190
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 09:24:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014318.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014318hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ipb_A PHON protein, class A n 93.4 0.21 7.3E-06 46.2 7.9 59 279-338 134-192 (230)
2 1d2t_A Acid phosphatase; all a 93.3 0.43 1.5E-05 44.3 9.8 58 279-337 146-203 (231)
3 4gpm_A Engineered protein OR26 40.4 25 0.00084 30.1 4.0 32 361-392 2-34 (169)
4 1up8_A Vanadium-dependent brom 24.8 95 0.0032 33.4 6.0 58 280-337 484-567 (598)
5 1qi9_A Protein (vanadium bromo 23.6 1.9E+02 0.0064 30.9 7.9 58 279-337 414-500 (556)
6 2cly_A ATP synthase B chain, m 21.6 40 0.0014 31.8 2.1 92 263-386 20-111 (214)
7 1bzk_A Protein (BAND 3 anion t 17.0 20 0.00068 25.9 -0.8 32 51-84 2-34 (43)
8 3twr_A Tankyrase-2; ankyrin re 13.5 2E+02 0.0068 23.0 4.3 23 363-385 8-30 (165)
9 2kuy_A Prebacteriocin glycocin 12.4 38 0.0013 24.2 -0.4 10 271-281 17-26 (43)
10 1bd8_A P19INK4D CDK4/6 inhibit 11.8 2E+02 0.0067 22.7 3.7 22 364-385 3-24 (156)
No 1
>2ipb_A PHON protein, class A nonspecific acid phosphatase PHON; class-A bacterial non-specific acid phosphatase; 2.23A {Salmonella typhimurium} PDB: 2a96_A 2akc_A
Probab=93.37 E-value=0.21 Score=46.23 Aligned_cols=59 Identities=22% Similarity=0.144 Sum_probs=41.0
Q ss_pred ccchhHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhHHhhcCCcchhhHHHHHHHHHHH
Q 014318 279 IYSGHMLVAVLTAMAWTEAYGGFSSALVWLLVMHSAQREVRERHHYSVDCIVAIYVGILL 338 (427)
Q Consensus 279 IFSGHT~~ltL~~l~~~eyyp~~~~~l~Wll~l~~~~~IIasR~HYTVDVvvA~yIt~L~ 338 (427)
.-||||...+..+.++..++|+....+.-+...++.-++ ....||--||+.|..++..+
T Consensus 134 FPSGHa~~a~a~a~~l~~~~~~~~~~~~~~a~~v~~SRv-~~G~H~~sDVlaG~~lG~~~ 192 (230)
T 2ipb_A 134 YPSGHDAYSTLLALVLSQARPERAQELARRGWEFGQSRV-ICGAHWQSDVDAGRYVGAVE 192 (230)
T ss_dssp SSCHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHH-HHTSSCHHHHHHHHHHHHHH
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCcccHHHHHHHHHHHHHH
Confidence 569999999888887777777643322211233344444 45679999999999999853
No 2
>1d2t_A Acid phosphatase; all alpha, hydrolase; 1.90A {Escherichia blattae} SCOP: a.111.1.1 PDB: 1eoi_A 1iw8_A
Probab=93.26 E-value=0.43 Score=44.26 Aligned_cols=58 Identities=21% Similarity=0.076 Sum_probs=40.7
Q ss_pred ccchhHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhHHhhcCCcchhhHHHHHHHHHH
Q 014318 279 IYSGHMLVAVLTAMAWTEAYGGFSSALVWLLVMHSAQREVRERHHYSVDCIVAIYVGIL 337 (427)
Q Consensus 279 IFSGHT~~ltL~~l~~~eyyp~~~~~l~Wll~l~~~~~IIasR~HYTVDVvvA~yIt~L 337 (427)
.-|||+......+.++..++|++...+.-+...++.-++ ...-||--||+.|..++..
T Consensus 146 FPSGHa~~a~a~a~~l~~~~~~~~~~~~~~a~~v~~SRv-ylGvH~psDVlaG~~lG~~ 203 (231)
T 1d2t_A 146 YPSGHTSIGWATALVLAEINPQRQNEILKRGYELGQSRV-ICGYHWQSDVDAARVVGSA 203 (231)
T ss_dssp SSCHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHH-HHTSSCHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCcCHHHHHHHHHHHHH
Confidence 569999999888887877788643222111233344444 4567999999999999985
No 3
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=40.44 E-value=25 Score=30.08 Aligned_cols=32 Identities=22% Similarity=0.558 Sum_probs=24.6
Q ss_pred hHHhHHHHHHhhhcchHHHHHHhhc-cCCCCcc
Q 014318 361 DKIQSRLLQAAKDSDMDKVTELLKE-VEPGGQE 392 (427)
Q Consensus 361 ~~~~~~~~~~~k~s~~~~~~~~l~~-~~~~~~~ 392 (427)
.++..+|++|++..+.|.++.||+. .++..++
T Consensus 2 sdlg~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d 34 (169)
T 4gpm_A 2 SELGKRLIEAAENGNKDRVKDLIENGADVNASD 34 (169)
T ss_dssp CHHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CHHHHHHHHHHHcCCHHHHHHHHHCCCCCCCcC
Confidence 3567789999999999999999975 4443333
No 4
>1up8_A Vanadium-dependent bromoperoxidase 1; haloperoxidase, vanadate; 2.20A {Corallina pilulifera} SCOP: a.111.1.2 PDB: 1qhb_A
Probab=24.84 E-value=95 Score=33.43 Aligned_cols=58 Identities=19% Similarity=0.063 Sum_probs=37.7
Q ss_pred cchhHHHHHHHHHHHHHHhcchh-------------------H-----H--HHHHHHHHHHhHHhhcCCcchhhHHHHHH
Q 014318 280 YSGHMLVAVLTAMAWTEAYGGFS-------------------S-----A--LVWLLVMHSAQREVRERHHYSVDCIVAIY 333 (427)
Q Consensus 280 FSGHT~~ltL~~l~~~eyyp~~~-------------------~-----~--l~Wll~l~~~~~IIasR~HYTVDVvvA~y 333 (427)
=|||+++...++..+..+++... . + ..+.++.-..+-=|..--||--||+.|+.
T Consensus 484 PSGHAt~S~A~A~vL~~lf~~~~~~~~~~~~~~~G~~R~~p~~g~~ltv~~sl~~lA~eig~SRVYlGVHypSDVlAG~~ 563 (598)
T 1up8_A 484 GSGHAVVAGACVTILKAFFDSGIEIDQVFEVDKDEDKLVKSSFKGTLTVAGELNKLADNIAIGRNMAGVHYFSDQFESLL 563 (598)
T ss_dssp SCHHHHHHHHHHHHHHHHBTTTCBCSCCEEECSSSSSEEECCCCSCCBHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHhccccccccccccccCcccccccccccchhHHHHHHHHHHHHHHHhheeeeecHHHHHHHHH
Confidence 49999999888888877776421 0 0 12223222233333445799999999999
Q ss_pred HHHH
Q 014318 334 VGIL 337 (427)
Q Consensus 334 It~L 337 (427)
++..
T Consensus 564 LG~a 567 (598)
T 1up8_A 564 LGEQ 567 (598)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9873
No 5
>1qi9_A Protein (vanadium bromoperoxidase); haloperoxidase, oxidoreductase; 2.05A {Ascophyllum nodosum} SCOP: a.111.1.2
Probab=23.61 E-value=1.9e+02 Score=30.86 Aligned_cols=58 Identities=24% Similarity=0.145 Sum_probs=35.2
Q ss_pred ccchhHHHHHHHHHHHHHHhcc-----------------hhH------HHH-----H-HHHHHHHhHHhhcCCcchhhHH
Q 014318 279 IYSGHMLVAVLTAMAWTEAYGG-----------------FSS------ALV-----W-LLVMHSAQREVRERHHYSVDCI 329 (427)
Q Consensus 279 IFSGHT~~ltL~~l~~~eyyp~-----------------~~~------~l~-----W-ll~l~~~~~IIasR~HYTVDVv 329 (427)
.-|||++.....+.++..+.+. ..+ .+. + +...++.-+ |..--||--||+
T Consensus 414 FPSGHAt~A~A~A~vL~~l~g~~~~~~~~~~r~~~~~~G~~r~~~~~~~l~~~~~l~~lA~lIg~SR-VYlGVHYPSDVl 492 (556)
T 1qi9_A 414 YPSGHATQNGAFATVLKALIGLDRGGDCYPDPVYPDDDGLKLIDFRGSCLTFEGEINKLAVNVAFGR-QMLGIHYRFDGI 492 (556)
T ss_dssp SSCHHHHHHHHHHHHHHHHHCHHHHTSBCSSCEEECTTSSSEEECCSSCCBHHHHHHHHHHHHHHHH-HHTTSCCHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHhccccccccccccccccccccccccccceeehhhHHHHHHHHHHHHH-HeeCccCHHHHH
Confidence 4599999988777766554421 100 011 1 122333334 345679999999
Q ss_pred HHHHHHHH
Q 014318 330 VAIYVGIL 337 (427)
Q Consensus 330 vA~yIt~L 337 (427)
.|+.++..
T Consensus 493 aG~lLG~~ 500 (556)
T 1qi9_A 493 QGLLLGET 500 (556)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999883
No 6
>2cly_A ATP synthase B chain, mitochondrial; mitochondrion, ION transport, CF(0), stator, transport, acetylation, hydrogen ION transport; 2.8A {Bos taurus} SCOP: f.52.1.1 PDB: 2wss_T*
Probab=21.59 E-value=40 Score=31.75 Aligned_cols=92 Identities=16% Similarity=0.194 Sum_probs=17.6
Q ss_pred hhhhhcccCCCCcCccccchhHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhHHhhcCCcchhhHHHHHHHHHHHHHHh
Q 014318 263 SWFSLLKKAGGGCNDLIYSGHMLVAVLTAMAWTEAYGGFSSALVWLLVMHSAQREVRERHHYSVDCIVAIYVGILLWKMT 342 (427)
Q Consensus 263 s~~~~l~~~~~~CGDLIFSGHT~~ltL~~l~~~eyyp~~~~~l~Wll~l~~~~~IIasR~HYTVDVvvA~yIt~L~W~~~ 342 (427)
+||+.+-...|.-|.|+|.+ -..+++.-.| +.|..++.|..=+++++++.. .+.
T Consensus 20 ~wf~~l~~KTGvtGPY~~~~----GL~~yliSKE-------------------iyVvneEt~~~~~~~~~~~~~--~K~- 73 (214)
T 2cly_A 20 EFFQFLYPKTGVTGPYVLGT----GLILYLLSKE-------------------IYVITPETFSAISTIGFLVYI--VKK- 73 (214)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHhccccchHHHHH----HHHHHHHcCc-------------------eEEEechHHHHHHHHHHHHHH--HHH-
Confidence 68888867777778888765 1222333445 234455655544444443332 111
Q ss_pred hhhccCCCcchhhhhhchhHHhHHHHHHhhhcchHHHHHHhhcc
Q 014318 343 GFIWPLKDASKSKRLNKLDKIQSRLLQAAKDSDMDKVTELLKEV 386 (427)
Q Consensus 343 ~~iws~~~~~~~~~l~kL~~~~~~~~~~~k~s~~~~~~~~l~~~ 386 (427)
-++.-...+.+..+-.....+++|+.+++.+.+-++.+
T Consensus 74 ------~Gp~~a~~~D~~~~~i~~~ln~~r~~~i~~lk~~Ie~~ 111 (214)
T 2cly_A 74 ------YGASVGEFADKLNEQKIAQLEEVKQASIKQIQDAIDME 111 (214)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------hcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222333333333456777777777766665543
No 7
>1bzk_A Protein (BAND 3 anion transport protein); human erythrocyte anion transporter, transmembrane, synthetic peptide; NMR {Synthetic} SCOP: j.35.1.1
Probab=17.00 E-value=20 Score=25.87 Aligned_cols=32 Identities=34% Similarity=0.545 Sum_probs=22.3
Q ss_pred hccccc-ccHHHHhhhHHHHHHHHHHHHHHHHHhh
Q 014318 51 RVPYYR-HWTAEFRAAIPFVGSMIFMLSALLFEAL 84 (427)
Q Consensus 51 r~~~~~-~w~~e~~~~~~f~~s~lfml~~l~i~a~ 84 (427)
|.|.|. .|.+-++ .+-+.+.+||.++.+.-++
T Consensus 2 R~p~Y~SD~~dg~~--~~~laa~~fiyFa~l~PaI 34 (43)
T 1bzk_A 2 RYPYYLSDITDAFS--PQVLAAVIFIYFAALSPAI 34 (43)
T ss_dssp CCSTTHHHHTTSSC--SHHHHHHHHHHHHTSTTTT
T ss_pred CCcccHHHHHHHhh--hhHHHHHHHHHHHHHHHHH
Confidence 778775 4555555 6788899999877655544
No 8
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=13.51 E-value=2e+02 Score=22.96 Aligned_cols=23 Identities=35% Similarity=0.489 Sum_probs=15.4
Q ss_pred HhHHHHHHhhhcchHHHHHHhhc
Q 014318 363 IQSRLLQAAKDSDMDKVTELLKE 385 (427)
Q Consensus 363 ~~~~~~~~~k~s~~~~~~~~l~~ 385 (427)
-++.+..|++..+.+.++.|+++
T Consensus 8 ~~~~l~~A~~~g~~~~v~~ll~~ 30 (165)
T 3twr_A 8 ADRQLLEAAKAGDVETVKKLCTV 30 (165)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCCT
T ss_pred hhHHHHHHHHhCCHHHHHHHHHc
Confidence 34566777777777777777764
No 9
>2kuy_A Prebacteriocin glycocin F; glycosylation, S-linked, antimic protein; HET: NAG; NMR {Lactobacillus plantarum}
Probab=12.41 E-value=38 Score=24.16 Aligned_cols=10 Identities=50% Similarity=1.142 Sum_probs=6.9
Q ss_pred CCCCcCccccc
Q 014318 271 AGGGCNDLIYS 281 (427)
Q Consensus 271 ~~~~CGDLIFS 281 (427)
++++| |||||
T Consensus 17 dsgtc-dymys 26 (43)
T 2kuy_A 17 DSGTC-DYMYS 26 (43)
T ss_dssp SSSHH-HHHHH
T ss_pred CCcch-hhhhh
Confidence 45555 89987
No 10
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=11.85 E-value=2e+02 Score=22.68 Aligned_cols=22 Identities=36% Similarity=0.465 Sum_probs=15.6
Q ss_pred hHHHHHHhhhcchHHHHHHhhc
Q 014318 364 QSRLLQAAKDSDMDKVTELLKE 385 (427)
Q Consensus 364 ~~~~~~~~k~s~~~~~~~~l~~ 385 (427)
.+.+..|++..+.+.++.|+++
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~ 24 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHR 24 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHT
T ss_pred chHHHHHHHhCCHHHHHHHHHh
Confidence 3466777777777777777776
Done!