Query 014319
Match_columns 427
No_of_seqs 169 out of 500
Neff 6.9
Searched_HMMs 13730
Date Mon Mar 25 09:25:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014319.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014319hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wfda_ a.7.14.1 (A:) Hypothet 50.8 21 0.0016 26.0 6.8 38 291-331 13-50 (93)
2 d2crba1 a.7.16.1 (A:8-90) Nucl 49.2 6.9 0.0005 28.5 3.4 33 297-332 12-44 (83)
3 d2hr2a1 a.118.8.8 (A:2-157) Hy 43.1 64 0.0046 24.5 12.3 32 294-328 101-132 (156)
4 d1xnfa_ a.118.8.1 (A:) Lipopro 40.6 52 0.0038 26.5 8.7 100 139-325 35-134 (259)
5 d1ihga1 a.118.8.1 (A:197-365) 40.0 39 0.0028 26.2 7.5 29 294-325 112-140 (169)
6 d1p5qa1 a.118.8.1 (A:258-427) 35.7 58 0.0042 25.3 7.9 29 294-325 97-125 (170)
7 d1kt1a1 a.118.8.1 (A:254-421) 33.9 45 0.0033 25.9 6.9 28 294-324 99-126 (168)
8 d1kt1a1 a.118.8.1 (A:254-421) 33.0 50 0.0037 25.6 7.0 17 254-270 32-48 (168)
9 d1wr0a1 a.7.14.1 (A:5-81) Vacu 32.2 34 0.0025 23.8 5.1 39 291-332 9-47 (77)
10 d1tjca_ a.118.8.1 (A:) Prolyl 30.8 23 0.0017 25.0 4.1 53 255-325 23-75 (95)
11 d1p5qa1 a.118.8.1 (A:258-427) 27.0 65 0.0048 25.0 6.7 14 256-269 32-45 (170)
12 d2hr2a1 a.118.8.8 (A:2-157) Hy 26.4 1.2E+02 0.0089 22.7 10.7 61 255-328 27-87 (156)
13 d2c2la1 a.118.8.1 (A:24-224) S 25.3 89 0.0065 23.8 7.3 29 294-325 73-101 (201)
14 d1qqea_ a.118.8.1 (A:) Vesicul 25.2 1.7E+02 0.013 24.1 12.2 35 138-192 74-108 (290)
15 d1elra_ a.118.8.1 (A:) Hop {Hu 24.2 78 0.0057 23.1 6.3 29 292-323 78-106 (128)
No 1
>d1wfda_ a.7.14.1 (A:) Hypothetical protein 1500032H18Rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=50.79 E-value=21 Score=26.02 Aligned_cols=38 Identities=21% Similarity=0.138 Sum_probs=34.1
Q ss_pred HHHHHHHHHhhhhccCCcchhHHHHHHHHHHHHHHHHHHHH
Q 014319 291 AKAAAYYYHGLILDEGNTEKFHGMAVAALQAADEYFKESKK 331 (427)
Q Consensus 291 ~kA~A~y~~a~~~~~~~~~~k~GeaIa~L~~A~~~l~~a~~ 331 (427)
.+|+.....|+.++. .++|-+|+-+|+.|.++|-.+.+
T Consensus 13 ~~A~~l~~~Av~~D~---~g~y~eA~~~Y~~aie~l~~~~~ 50 (93)
T d1wfda_ 13 TAAVAVLKRAVELDA---ESRYQQALVCYQEGIDMLLQVLK 50 (93)
T ss_dssp HHHHHHHHHHHHHHH---TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH---cCCHHHHHHHHHHHHHHHHHHhh
Confidence 477888889999999 99999999999999999988875
No 2
>d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=49.23 E-value=6.9 Score=28.46 Aligned_cols=33 Identities=18% Similarity=0.057 Sum_probs=28.4
Q ss_pred HHHhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 014319 297 YYHGLILDEGNTEKFHGMAVAALQAADEYFKESKKA 332 (427)
Q Consensus 297 y~~a~~~~~~~~~~k~GeaIa~L~~A~~~l~~a~~~ 332 (427)
-+.|..+.. ..+|-|||-|.+.|..++.+|.+.
T Consensus 12 ~RrAer~l~---~~rydeAIech~kA~~yl~eA~kl 44 (83)
T d2crba1 12 SRRADRLLA---AGKYEEAISCHRKATTYLSEAMKL 44 (83)
T ss_dssp HHHHHHHHH---TTCHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHH---cCCHHHHHHHHHHHHHHHHHHHhC
Confidence 345666777 899999999999999999999874
No 3
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]}
Probab=43.11 E-value=64 Score=24.47 Aligned_cols=32 Identities=25% Similarity=0.255 Sum_probs=25.5
Q ss_pred HHHHHHhhhhccCCcchhHHHHHHHHHHHHHHHHH
Q 014319 294 AAYYYHGLILDEGNTEKFHGMAVAALQAADEYFKE 328 (427)
Q Consensus 294 ~A~y~~a~~~~~~~~~~k~GeaIa~L~~A~~~l~~ 328 (427)
.+++..|..+.. .+++-+||..|+.|.++..+
T Consensus 101 ~a~~~~g~~~~~---lg~~eeA~~~~~~Al~l~~~ 132 (156)
T d2hr2a1 101 SAVYSRALALDG---LGRGAEAMPEFKKVVEMIEE 132 (156)
T ss_dssp HHHHHHHHHHHH---TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHH---HHHHHHHHHHHHHHHHhhHH
Confidence 567888888888 88888899999888877543
No 4
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]}
Probab=40.62 E-value=52 Score=26.49 Aligned_cols=100 Identities=14% Similarity=-0.032 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCHHHHHHHHHHHHHHhhHHHHHHhccCCCCCccccCCCCCCCCHHH
Q 014319 139 EVLSVLHLMAMLSLSQANLLLLPRTSADGYQPKVSEESRRASVDIFLKAAGYLDCAVRHVLPQMSPELRRELPVDLAEGD 218 (427)
Q Consensus 139 EkasVLfNiaal~s~~aa~~~~~~~~~~~~~~~~t~dglK~A~~~fq~AAG~F~~l~e~~~~~~~~~~~~~~p~Dl~~~~ 218 (427)
+.+.++||+|.+|...+- .+.|..+|++|-.+ +|+.
T Consensus 35 ~~a~~~~~~G~~y~~~g~--------------------~~~A~~~~~~al~l------------------------~p~~ 70 (259)
T d1xnfa_ 35 ERAQLLYERGVLYDSLGL--------------------RALARNDFSQALAI------------------------RPDM 70 (259)
T ss_dssp HHHHHHHHHHHHHHHTTC--------------------HHHHHHHHHHHHHH------------------------CCCC
T ss_pred HHHHHHHHHHHHHHHCCC--------------------HHHHHHHHHHhhcc------------------------CCCC
Q ss_pred HHHHHHHHhHHHHHHHHHHhhhhccchhhHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccccccchhHHHHHHHHHHH
Q 014319 219 LRALCLQALGQGVDIQLGMAIDSTKATLAVKRRLACEMVKYWQQAQDNIMNLPLANGWGEKHKLFVKWKYFEAKAAAYYY 298 (427)
Q Consensus 219 L~aL~~lmLAQAQE~~~~KAi~~~k~k~sliAKLA~q~s~~Y~~A~~~l~~~~~~~~~~~k~~~~~~Wk~~~~kA~A~y~ 298 (427)
..++..+..+-.+---+.+|++ .|+.|.+.-.... .+++.
T Consensus 71 ~~a~~~lg~~~~~~g~~~~A~~------------------~~~~al~~~p~~~----------------------~a~~~ 110 (259)
T d1xnfa_ 71 PEVFNYLGIYLTQAGNFDAAYE------------------AFDSVLELDPTYN----------------------YAHLN 110 (259)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHH------------------HHHHHHHHCTTCT----------------------HHHHH
T ss_pred HHHHhhhchHHHHHHHHHHhhh------------------hhhHHHHHHhhhh----------------------hhHHH
Q ss_pred HhhhhccCCcchhHHHHHHHHHHHHHH
Q 014319 299 HGLILDEGNTEKFHGMAVAALQAADEY 325 (427)
Q Consensus 299 ~a~~~~~~~~~~k~GeaIa~L~~A~~~ 325 (427)
.|..+.. .+++.+|+..++.|.+.
T Consensus 111 lg~~~~~---~g~~~~A~~~~~~al~~ 134 (259)
T d1xnfa_ 111 RGIALYY---GGRDKLAQDDLLAFYQD 134 (259)
T ss_dssp HHHHHHH---TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHH---HhhHHHHHHHHHHHHhh
No 5
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]}
Probab=40.04 E-value=39 Score=26.15 Aligned_cols=29 Identities=28% Similarity=0.156 Sum_probs=22.9
Q ss_pred HHHHHHhhhhccCCcchhHHHHHHHHHHHHHH
Q 014319 294 AAYYYHGLILDEGNTEKFHGMAVAALQAADEY 325 (427)
Q Consensus 294 ~A~y~~a~~~~~~~~~~k~GeaIa~L~~A~~~ 325 (427)
.||++.|..+.. .++|.+|+..|+.|.++
T Consensus 112 ~a~~~~g~~~~~---l~~~~~A~~~~~~al~l 140 (169)
T d1ihga1 112 KALYRRAQGWQG---LKEYDQALADLKKAQEI 140 (169)
T ss_dssp HHHHHHHHHHHH---TTCHHHHHHHHHHHHHH
T ss_pred hHHHhHHHHHHH---ccCHHHHHHHHHHHHHh
Confidence 567888888888 78888888888877754
No 6
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.68 E-value=58 Score=25.31 Aligned_cols=29 Identities=14% Similarity=-0.055 Sum_probs=20.1
Q ss_pred HHHHHHhhhhccCCcchhHHHHHHHHHHHHHH
Q 014319 294 AAYYYHGLILDEGNTEKFHGMAVAALQAADEY 325 (427)
Q Consensus 294 ~A~y~~a~~~~~~~~~~k~GeaIa~L~~A~~~ 325 (427)
-++++.|..+.. .++|-+|+..|+.|.++
T Consensus 97 ~a~~~~g~~~~~---~g~~~~A~~~~~~al~l 125 (170)
T d1p5qa1 97 KGLSRRGEAHLA---VNDFELARADFQKVLQL 125 (170)
T ss_dssp HHHHHHHHHHHH---TTCHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHH---hhhHHHHHHHHHHHHHh
Confidence 456777777777 77777777777776543
No 7
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]}
Probab=33.89 E-value=45 Score=25.86 Aligned_cols=28 Identities=14% Similarity=-0.024 Sum_probs=18.4
Q ss_pred HHHHHHhhhhccCCcchhHHHHHHHHHHHHH
Q 014319 294 AAYYYHGLILDEGNTEKFHGMAVAALQAADE 324 (427)
Q Consensus 294 ~A~y~~a~~~~~~~~~~k~GeaIa~L~~A~~ 324 (427)
-++++.|..+.. .++|.+|+..|+.|.+
T Consensus 99 ~a~~~~~~~~~~---l~~~~~A~~~~~~al~ 126 (168)
T d1kt1a1 99 KGLYRRGEAQLL---MNEFESAKGDFEKVLE 126 (168)
T ss_dssp HHHHHHHHHHHH---TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH---cCCHHHHHHHHHHHHH
Confidence 356666666666 6677777777766553
No 8
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]}
Probab=33.05 E-value=50 Score=25.56 Aligned_cols=17 Identities=6% Similarity=-0.083 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHHhcC
Q 014319 254 CEMVKYWQQAQDNIMNL 270 (427)
Q Consensus 254 ~q~s~~Y~~A~~~l~~~ 270 (427)
.++..+|+.|+..+...
T Consensus 32 ~~A~~~Y~~al~~~~~~ 48 (168)
T d1kt1a1 32 VQAVIQYGKIVSWLEME 48 (168)
T ss_dssp HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 45566899998887653
No 9
>d1wr0a1 a.7.14.1 (A:5-81) Vacuolar sorting protein 4b (VPS4B, SKD1 protein) {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.18 E-value=34 Score=23.80 Aligned_cols=39 Identities=23% Similarity=0.083 Sum_probs=34.5
Q ss_pred HHHHHHHHHhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 014319 291 AKAAAYYYHGLILDEGNTEKFHGMAVAALQAADEYFKESKKA 332 (427)
Q Consensus 291 ~kA~A~y~~a~~~~~~~~~~k~GeaIa~L~~A~~~l~~a~~~ 332 (427)
-+|+.....|..++. .++|-+|+-+|..|.+++..+.+.
T Consensus 9 ~~A~~l~~~Av~~D~---~~~y~~A~~~Y~~a~~~l~~~l~~ 47 (77)
T d1wr0a1 9 QKAIDLASKAAQEDK---AGNYEEALQLYQHAVQYFLHVVKY 47 (77)
T ss_dssp HHHHHHHHHHHHHHH---TTCCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH---cCCHHHHHHHHHHHHHHHHHHHhc
Confidence 377888889999999 999999999999999999888764
No 10
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.79 E-value=23 Score=25.03 Aligned_cols=53 Identities=11% Similarity=-0.013 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCcccccccchhHHHHHHHHHHHHhhhhccCCcchhHHHHHHHHHHHHHH
Q 014319 255 EMVKYWQQAQDNIMNLPLANGWGEKHKLFVKWKYFEAKAAAYYYHGLILDEGNTEKFHGMAVAALQAADEY 325 (427)
Q Consensus 255 q~s~~Y~~A~~~l~~~~~~~~~~~k~~~~~~Wk~~~~kA~A~y~~a~~~~~~~~~~k~GeaIa~L~~A~~~ 325 (427)
++...|++|.+....... .| .-++-+++..|..... .+++.+||..++.|.++
T Consensus 23 ~A~~~~~~Al~~~~~~~~------------~~---~~~~~~l~~Lg~~~~~---~g~~~~A~~~y~~aL~l 75 (95)
T d1tjca_ 23 HTELWMEQALRQLDEGEI------------ST---IDKVSVLDYLSYAVYQ---QGDLDKALLLTKKLLEL 75 (95)
T ss_dssp HHHHHHHHHHHHHHTTCC------------CS---SCHHHHHHHHHHHHHH---TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhc------------cC---ccHHHHHHHHhhHHHh---cCChHHHHHHHHHHHHh
Confidence 344678888776654332 01 0123556667777777 78888888888877654
No 11
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.00 E-value=65 Score=24.96 Aligned_cols=14 Identities=0% Similarity=-0.035 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHhc
Q 014319 256 MVKYWQQAQDNIMN 269 (427)
Q Consensus 256 ~s~~Y~~A~~~l~~ 269 (427)
+...|.+|+..+..
T Consensus 32 Ai~~y~~al~~~~~ 45 (170)
T d1p5qa1 32 ALLQYKKIVSWLEY 45 (170)
T ss_dssp HHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHhhh
Confidence 34578887776654
No 12
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]}
Probab=26.36 E-value=1.2e+02 Score=22.65 Aligned_cols=61 Identities=15% Similarity=0.049 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCcccccccchhHHHHHHHHHHHHhhhhccCCcchhHHHHHHHHHHHHHHHHH
Q 014319 255 EMVKYWQQAQDNIMNLPLANGWGEKHKLFVKWKYFEAKAAAYYYHGLILDEGNTEKFHGMAVAALQAADEYFKE 328 (427)
Q Consensus 255 q~s~~Y~~A~~~l~~~~~~~~~~~k~~~~~~Wk~~~~kA~A~y~~a~~~~~~~~~~k~GeaIa~L~~A~~~l~~ 328 (427)
++.+.|++|+......+.. ..+.+....+.+|.-.|..+.. .++|.+++.+++.|..+...
T Consensus 27 ~Ai~~y~~Al~i~~~~~~~----------~~~~~~~~~a~~~~nlg~~~~~---lg~~~~A~~~~~~al~~~~~ 87 (156)
T d2hr2a1 27 EAAANCRRAMEISHTMPPE----------EAFDHAGFDAFCHAGLAEALAG---LRSFDEALHSADKALHYFNR 87 (156)
T ss_dssp HHHHHHHHHHHHHTTSCTT----------SCCCHHHHHHHHHHHHHHHHHH---TTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhChhhhhh----------hhcccchhHHHHHHHHHHHHHH---cCccchhhHhhhhhhhcccc
Confidence 3445788887766543320 0113444556667777777777 77788888888777766543
No 13
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.27 E-value=89 Score=23.84 Aligned_cols=29 Identities=28% Similarity=0.184 Sum_probs=20.2
Q ss_pred HHHHHHhhhhccCCcchhHHHHHHHHHHHHHH
Q 014319 294 AAYYYHGLILDEGNTEKFHGMAVAALQAADEY 325 (427)
Q Consensus 294 ~A~y~~a~~~~~~~~~~k~GeaIa~L~~A~~~ 325 (427)
-+|++.|..+.. .++|-+|+..|+.|..+
T Consensus 73 ~a~~~lg~~~~~---l~~~~~A~~~~~~al~l 101 (201)
T d2c2la1 73 KAHFFLGQCQLE---MESYDEAIANLQRAYSL 101 (201)
T ss_dssp HHHHHHHHHHHH---TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH---CCCHHHHHHHHHHHHHh
Confidence 356667777777 77777788777776543
No 14
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.24 E-value=1.7e+02 Score=24.07 Aligned_cols=35 Identities=14% Similarity=-0.080 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCHHHHHHHHHHHHHHhhHHH
Q 014319 138 YEVLSVLHLMAMLSLSQANLLLLPRTSADGYQPKVSEESRRASVDIFLKAAGYLD 192 (427)
Q Consensus 138 fEkasVLfNiaal~s~~aa~~~~~~~~~~~~~~~~t~dglK~A~~~fq~AAG~F~ 192 (427)
.+.+..+.|+|.+|...+ ...+|..+|++|.-++.
T Consensus 74 ~~~a~~~~~~g~~y~~~~--------------------~~~~A~~~~~~a~~~~~ 108 (290)
T d1qqea_ 74 DEAGNTYVEAYKCFKSGG--------------------NSVNAVDSLENAIQIFT 108 (290)
T ss_dssp HHHHHHHHHHHHHHHHTT--------------------CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhC--------------------CcHHHHHHHHHhhHHhh
Confidence 355677778776654322 14578888888777663
No 15
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.19 E-value=78 Score=23.14 Aligned_cols=29 Identities=21% Similarity=-0.027 Sum_probs=20.5
Q ss_pred HHHHHHHHhhhhccCCcchhHHHHHHHHHHHH
Q 014319 292 KAAAYYYHGLILDEGNTEKFHGMAVAALQAAD 323 (427)
Q Consensus 292 kA~A~y~~a~~~~~~~~~~k~GeaIa~L~~A~ 323 (427)
.+.+|+..|..... .+.+-+||..++.|.
T Consensus 78 ~a~~~~~lg~~~~~---~~~~~~A~~~~~kal 106 (128)
T d1elra_ 78 IAKAYARIGNSYFK---EEKYKDAIHFYNKSL 106 (128)
T ss_dssp HHHHHHHHHHHHHH---TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH---hCCHHHHHHHHHHHH
Confidence 45677888888777 777777777666554
Done!