Query 014320
Match_columns 427
No_of_seqs 351 out of 2919
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 03:58:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014320.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014320hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02942 dihydropyrimidinase 100.0 1.3E-58 2.8E-63 463.9 42.1 375 52-426 4-378 (486)
2 COG0044 PyrC Dihydroorotase an 100.0 1.2E-58 2.5E-63 449.5 37.5 355 54-426 2-358 (430)
3 KOG2584 Dihydroorotase and rel 100.0 6E-59 1.3E-63 426.5 25.9 375 52-426 13-390 (522)
4 PLN02795 allantoinase 100.0 1.8E-56 4E-61 448.2 43.8 372 45-426 36-424 (505)
5 PRK07369 dihydroorotase; Provi 100.0 3.4E-57 7.4E-62 443.7 34.6 356 53-426 2-363 (418)
6 PRK13404 dihydropyrimidinase; 100.0 3.5E-56 7.6E-61 444.6 41.0 370 52-426 3-381 (477)
7 PRK08323 phenylhydantoinase; V 100.0 4.2E-54 9.1E-59 431.6 42.1 368 54-426 2-372 (459)
8 PRK07627 dihydroorotase; Provi 100.0 4.5E-55 9.7E-60 430.1 33.4 355 54-426 2-361 (425)
9 cd01314 D-HYD D-hydantoinases 100.0 5.4E-54 1.2E-58 429.2 41.1 370 55-426 1-372 (447)
10 TIGR02033 D-hydantoinase D-hyd 100.0 8.8E-54 1.9E-58 429.0 41.7 371 55-426 1-374 (454)
11 PRK09059 dihydroorotase; Valid 100.0 2.3E-54 5E-59 425.5 33.5 358 51-426 1-366 (429)
12 PRK08417 dihydroorotase; Provi 100.0 3.3E-54 7.2E-59 420.3 32.6 327 73-426 1-331 (386)
13 PRK06189 allantoinase; Provisi 100.0 7.4E-53 1.6E-57 419.6 40.7 363 51-426 1-369 (451)
14 PRK08044 allantoinase; Provisi 100.0 8.4E-53 1.8E-57 417.6 40.5 360 52-426 2-371 (449)
15 TIGR03178 allantoinase allanto 100.0 2.1E-52 4.5E-57 416.1 40.6 360 54-426 1-366 (443)
16 cd01315 L-HYD_ALN L-Hydantoina 100.0 2.7E-51 5.8E-56 409.7 41.0 363 54-426 1-369 (447)
17 PRK02382 dihydroorotase; Provi 100.0 2.7E-51 5.8E-56 407.5 37.8 352 53-426 2-357 (443)
18 PRK09060 dihydroorotase; Valid 100.0 1.3E-50 2.8E-55 401.8 39.4 352 52-426 4-360 (444)
19 PRK07575 dihydroorotase; Provi 100.0 5.2E-50 1.1E-54 397.1 38.8 353 51-426 1-358 (438)
20 TIGR00857 pyrC_multi dihydroor 100.0 1.9E-49 4E-54 390.6 36.2 341 69-426 4-347 (411)
21 PRK09357 pyrC dihydroorotase; 100.0 3E-49 6.6E-54 392.0 35.8 355 54-426 2-360 (423)
22 PRK01211 dihydroorotase; Provi 100.0 9E-50 2E-54 388.5 29.6 322 61-426 6-329 (409)
23 PRK09236 dihydroorotase; Revie 100.0 3.3E-48 7.2E-53 385.4 39.6 357 53-426 2-364 (444)
24 PRK04250 dihydroorotase; Provi 100.0 2.3E-46 4.9E-51 365.0 33.1 318 59-426 3-323 (398)
25 PRK00369 pyrC dihydroorotase; 100.0 2.8E-45 6.1E-50 355.1 30.3 299 70-426 13-314 (392)
26 cd01318 DHOase_IIb Dihydroorot 100.0 4.2E-45 9.2E-50 352.2 30.5 300 100-426 1-303 (361)
27 cd01317 DHOase_IIa Dihydroorot 100.0 1E-44 2.2E-49 353.2 29.3 317 93-426 2-321 (374)
28 cd01302 Cyclic_amidohydrolases 100.0 1.3E-43 2.9E-48 339.8 29.2 278 101-426 1-283 (337)
29 cd01316 CAD_DHOase The eukaryo 100.0 3.1E-41 6.7E-46 321.7 27.6 273 101-426 2-277 (344)
30 cd01294 DHOase Dihydroorotase 100.0 3.4E-38 7.4E-43 302.7 26.7 284 103-426 2-294 (335)
31 PRK09061 D-glutamate deacylase 100.0 2.2E-37 4.7E-42 310.9 31.0 330 52-426 18-432 (509)
32 cd01297 D-aminoacylase D-amino 100.0 1.5E-34 3.2E-39 285.4 28.7 296 54-426 1-351 (415)
33 TIGR00856 pyrC_dimer dihydroor 100.0 3.7E-34 8.1E-39 273.0 24.6 284 102-426 2-297 (341)
34 PLN02599 dihydroorotase 100.0 2.1E-33 4.6E-38 268.0 26.3 286 101-426 22-319 (364)
35 PRK05451 dihydroorotase; Provi 100.0 1.8E-32 4E-37 262.8 25.8 281 102-426 5-300 (345)
36 PRK15446 phosphonate metabolis 100.0 2E-31 4.4E-36 259.2 27.6 315 53-426 2-340 (383)
37 TIGR02318 phosphono_phnM phosp 100.0 2.1E-30 4.6E-35 251.2 25.4 312 56-426 1-336 (376)
38 PRK15493 5-methylthioadenosine 100.0 5.1E-30 1.1E-34 254.3 28.4 313 54-426 2-351 (435)
39 PRK06687 chlorohydrolase; Vali 100.0 5.5E-30 1.2E-34 253.8 27.3 312 55-426 2-350 (419)
40 PRK07228 N-ethylammeline chlor 100.0 1.2E-28 2.5E-33 246.3 29.9 311 54-426 2-353 (445)
41 cd01298 ATZ_TRZ_like TRZ/ATZ f 100.0 5.6E-29 1.2E-33 246.7 25.2 309 55-426 1-348 (411)
42 PRK08203 hydroxydechloroatrazi 100.0 3E-27 6.4E-32 236.4 30.1 312 55-426 4-367 (451)
43 PRK09045 N-ethylammeline chlor 100.0 3.9E-27 8.3E-32 234.9 30.1 310 53-426 7-356 (443)
44 PRK12394 putative metallo-depe 100.0 6.4E-27 1.4E-31 228.5 24.7 289 52-426 2-317 (379)
45 PRK06380 metal-dependent hydro 100.0 4E-26 8.7E-31 226.2 28.9 308 54-426 2-341 (418)
46 PRK07203 putative chlorohydrol 100.0 5.1E-26 1.1E-30 226.7 29.8 308 55-426 2-354 (442)
47 PRK09228 guanine deaminase; Pr 100.0 4.7E-26 1E-30 225.7 28.8 298 69-426 30-364 (433)
48 TIGR02967 guan_deamin guanine 100.0 3.1E-26 6.8E-31 225.9 27.0 298 69-426 5-339 (401)
49 PRK12393 amidohydrolase; Provi 100.0 5.5E-26 1.2E-30 226.9 28.2 313 53-426 2-371 (457)
50 TIGR03314 Se_ssnA putative sel 99.9 7.2E-26 1.6E-30 225.1 27.7 298 56-425 2-352 (441)
51 PRK06038 N-ethylammeline chlor 99.9 1.2E-25 2.7E-30 223.0 28.8 309 53-426 2-344 (430)
52 PRK08204 hypothetical protein; 99.9 7.6E-26 1.6E-30 226.4 27.5 304 53-426 2-358 (449)
53 cd01303 GDEase Guanine deamina 99.9 1.6E-25 3.5E-30 222.0 27.1 299 69-426 25-367 (429)
54 PRK10657 isoaspartyl dipeptida 99.9 3.1E-25 6.8E-30 217.9 28.7 313 54-426 2-339 (388)
55 PRK06151 N-ethylammeline chlor 99.9 2E-25 4.3E-30 224.7 27.8 309 54-426 2-380 (488)
56 PRK08393 N-ethylammeline chlor 99.9 5.9E-25 1.3E-29 217.8 29.5 308 54-426 2-343 (424)
57 COG1574 Predicted metal-depend 99.9 3.7E-26 8.1E-31 226.2 20.8 323 51-426 3-483 (535)
58 PRK14085 imidazolonepropionase 99.9 1.5E-24 3.2E-29 212.2 29.0 289 54-426 2-340 (382)
59 TIGR01975 isoAsp_dipep isoaspa 99.9 2.5E-24 5.4E-29 208.5 28.7 312 55-426 2-340 (389)
60 cd01293 Bact_CD Bacterial cyto 99.9 1.7E-24 3.7E-29 213.6 27.6 267 57-369 2-309 (398)
61 cd01308 Isoaspartyl-dipeptidas 99.9 7.3E-24 1.6E-28 208.1 28.7 310 55-426 2-338 (387)
62 PRK08418 chlorohydrolase; Prov 99.9 1.2E-24 2.7E-29 213.8 22.3 311 55-426 2-355 (408)
63 COG0402 SsnA Cytosine deaminas 99.9 5.5E-24 1.2E-28 210.6 27.0 312 54-426 3-352 (421)
64 cd01313 Met_dep_hydrolase_E Me 99.9 2.9E-24 6.3E-29 212.2 24.9 290 69-426 9-363 (418)
65 COG3964 Predicted amidohydrola 99.9 6.7E-24 1.4E-28 187.8 20.9 291 51-426 2-316 (386)
66 PRK09356 imidazolonepropionase 99.9 1.5E-23 3.4E-28 207.2 26.1 295 51-426 1-356 (406)
67 cd01312 Met_dep_hydrolase_D Me 99.9 5.7E-24 1.2E-28 207.0 21.8 294 78-426 1-332 (381)
68 PRK07213 chlorohydrolase; Prov 99.9 3E-23 6.5E-28 202.3 26.7 288 55-426 2-322 (375)
69 PRK05985 cytosine deaminase; P 99.9 4.2E-23 9.1E-28 202.8 27.6 298 53-426 2-343 (391)
70 TIGR01178 ade adenine deaminas 99.9 5.5E-23 1.2E-27 207.2 28.6 174 54-238 1-185 (552)
71 PRK13206 ureC urease subunit a 99.9 3.4E-23 7.3E-28 204.4 26.3 205 52-305 70-297 (573)
72 TIGR02022 hutF formiminoglutam 99.9 4.5E-23 9.7E-28 205.7 23.9 304 55-426 4-373 (455)
73 PRK07572 cytosine deaminase; V 99.9 2.3E-22 5.1E-27 199.3 28.6 264 54-369 3-311 (426)
74 PRK13207 ureC urease subunit a 99.9 3.3E-22 7.1E-27 198.0 28.9 208 52-308 66-294 (568)
75 PRK13308 ureC urease subunit a 99.9 1.4E-22 3.1E-27 199.1 25.9 169 52-239 67-252 (569)
76 PRK09230 cytosine deaminase; P 99.9 6.2E-22 1.3E-26 195.6 30.0 311 53-426 4-360 (426)
77 PRK09229 N-formimino-L-glutama 99.9 5.5E-23 1.2E-27 205.5 22.6 304 54-426 4-373 (456)
78 cd01296 Imidazolone-5PH Imidaz 99.9 2.3E-22 4.9E-27 196.6 23.6 273 73-426 1-326 (371)
79 PRK13309 ureC urease subunit a 99.9 7.9E-22 1.7E-26 195.8 26.5 169 52-239 67-256 (572)
80 PRK07583 cytosine deaminase-li 99.9 1E-21 2.2E-26 195.4 27.3 308 53-426 11-376 (438)
81 PRK09237 dihydroorotase; Provi 99.9 7.8E-22 1.7E-26 193.1 25.4 179 55-238 1-191 (380)
82 TIGR01224 hutI imidazoloneprop 99.9 7.6E-22 1.6E-26 193.3 24.8 276 69-426 2-330 (377)
83 PRK13985 ureB urease subunit b 99.9 1.1E-21 2.5E-26 192.0 25.2 205 52-305 64-291 (568)
84 cd00375 Urease_alpha Urease al 99.9 9.4E-22 2E-26 193.2 24.2 193 52-293 64-276 (567)
85 cd01307 Met_dep_hydrolase_B Me 99.9 1.3E-21 2.8E-26 188.4 23.7 162 72-238 1-172 (338)
86 cd01300 YtcJ_like YtcJ_like me 99.9 5.8E-23 1.3E-27 207.2 14.9 247 131-426 189-459 (479)
87 COG1228 HutI Imidazolonepropio 99.9 1E-22 2.2E-27 197.5 15.4 293 53-426 10-352 (406)
88 PRK10027 cryptic adenine deami 99.9 2.9E-21 6.2E-26 194.8 26.3 178 52-238 29-218 (588)
89 cd01299 Met_dep_hydrolase_A Me 99.9 6.2E-22 1.3E-26 191.4 19.0 264 94-426 2-310 (342)
90 COG1001 AdeC Adenine deaminase 99.9 6.9E-21 1.5E-25 185.1 21.9 179 52-239 23-213 (584)
91 PLN02303 urease 99.9 1.1E-20 2.3E-25 191.7 21.8 193 52-255 333-548 (837)
92 PRK06846 putative deaminase; V 99.9 1.6E-19 3.6E-24 178.2 27.3 241 69-369 30-313 (410)
93 cd00854 NagA N-acetylglucosami 99.9 4.1E-20 8.8E-25 180.0 22.3 173 56-236 2-194 (374)
94 TIGR00221 nagA N-acetylglucosa 99.9 1.6E-19 3.4E-24 174.6 24.4 127 52-178 2-133 (380)
95 TIGR01792 urease_alph urease, 99.8 1.3E-19 2.9E-24 179.8 22.0 170 52-240 65-252 (567)
96 TIGR03583 EF_0837 probable ami 99.8 1E-18 2.2E-23 170.2 25.6 175 54-238 2-188 (365)
97 PRK11170 nagA N-acetylglucosam 99.8 1.3E-19 2.9E-24 175.6 19.0 123 55-177 2-132 (382)
98 COG3454 Metal-dependent hydrol 99.8 3.6E-19 7.8E-24 159.7 19.6 143 56-200 2-160 (377)
99 KOG3968 Atrazine chlorohydrola 99.8 3.4E-19 7.4E-24 165.7 18.3 299 69-426 26-374 (439)
100 COG1820 NagA N-acetylglucosami 99.7 6.7E-17 1.5E-21 151.3 18.5 108 55-163 2-113 (380)
101 cd01295 AdeC Adenine deaminase 99.7 2.1E-16 4.6E-21 156.4 23.2 136 97-239 1-145 (422)
102 cd01305 archeal_chlorohydrolas 99.7 3.6E-17 7.8E-22 152.0 15.5 234 102-426 1-263 (263)
103 cd01304 FMDH_A Formylmethanofu 99.7 2.2E-15 4.9E-20 148.3 25.4 228 57-317 1-304 (541)
104 cd01309 Met_dep_hydrolase_C Me 99.7 8.5E-16 1.9E-20 148.9 22.1 273 77-426 1-316 (359)
105 PF13147 Amidohydro_4: Amidohy 99.7 1.3E-15 2.7E-20 143.8 17.8 280 97-426 1-285 (304)
106 TIGR03121 one_C_dehyd_A formyl 99.7 4.4E-14 9.6E-19 139.9 27.2 94 55-150 2-123 (556)
107 cd01292 metallo-dependent_hydr 99.6 1.5E-14 3.3E-19 134.6 20.2 247 107-426 1-275 (275)
108 PF13594 Amidohydro_5: Amidohy 99.6 1.1E-15 2.4E-20 110.6 6.7 67 73-142 1-68 (68)
109 COG0418 PyrC Dihydroorotase [N 99.6 7E-13 1.5E-17 118.5 22.0 284 102-426 5-300 (344)
110 COG3653 N-acyl-D-aspartate/D-g 99.6 2.8E-13 6.1E-18 126.1 18.4 85 52-143 5-92 (579)
111 cd01306 PhnM PhnM is believed 99.6 4E-13 8.7E-18 126.8 19.5 236 104-426 1-289 (325)
112 PRK06886 hypothetical protein; 99.5 2.7E-12 5.9E-17 121.5 20.5 253 105-426 20-324 (329)
113 COG0804 UreC Urea amidohydrola 99.5 9E-13 2E-17 121.7 16.2 169 52-239 66-252 (568)
114 KOG2902 Dihydroorotase [Nucleo 99.4 6.8E-11 1.5E-15 102.3 17.4 242 102-377 5-255 (344)
115 PF01979 Amidohydro_1: Amidohy 99.3 8.3E-12 1.8E-16 120.1 12.8 135 102-238 1-173 (333)
116 PF07969 Amidohydro_3: Amidohy 99.3 8.1E-12 1.7E-16 123.6 8.6 234 132-426 137-384 (404)
117 cd00530 PTE Phosphotriesterase 99.1 2.1E-08 4.5E-13 94.8 21.4 263 106-426 1-292 (293)
118 cd01310 TatD_DNAse TatD like p 99.0 1.6E-08 3.4E-13 93.3 18.2 241 107-426 1-249 (251)
119 COG1229 FwdA Formylmethanofura 99.0 4.5E-09 9.8E-14 97.8 12.3 64 52-117 2-68 (575)
120 TIGR00010 hydrolase, TatD fami 99.0 4.4E-08 9.5E-13 90.4 17.3 241 107-426 1-249 (252)
121 PRK10812 putative DNAse; Provi 98.8 3.3E-07 7.2E-12 84.7 18.5 245 107-426 3-253 (265)
122 PRK09875 putative hydrolase; P 98.8 1.1E-06 2.4E-11 81.9 21.4 258 106-426 7-290 (292)
123 PF12890 DHOase: Dihydro-orota 98.8 1.1E-08 2.5E-13 80.7 6.8 136 100-294 1-140 (142)
124 cd01320 ADA Adenosine deaminas 98.8 7.7E-07 1.7E-11 85.4 19.9 138 212-425 170-309 (325)
125 TIGR01430 aden_deam adenosine 98.8 8.7E-07 1.9E-11 84.9 19.9 139 211-425 168-308 (324)
126 COG0084 TatD Mg-dependent DNas 98.6 5.9E-06 1.3E-10 75.3 18.5 242 106-426 2-253 (256)
127 PRK11449 putative deoxyribonuc 98.5 1.6E-05 3.5E-10 73.2 19.5 244 104-426 2-255 (258)
128 PRK10425 DNase TatD; Provision 98.5 1.3E-05 2.9E-10 73.7 18.5 248 107-426 1-255 (258)
129 PF01026 TatD_DNase: TatD rela 98.5 4.5E-06 9.7E-11 77.1 15.3 242 108-426 1-253 (255)
130 PRK09358 adenosine deaminase; 98.5 2.2E-05 4.7E-10 75.8 19.9 107 211-371 178-286 (340)
131 PF02126 PTE: Phosphotriestera 98.4 4.1E-06 9E-11 78.7 13.1 261 106-426 7-306 (308)
132 KOG3892 N-acetyl-glucosamine-6 98.2 3.7E-06 8E-11 74.6 6.1 93 54-146 13-111 (407)
133 COG1735 Php Predicted metal-de 98.0 0.00066 1.4E-08 62.1 17.0 156 131-315 54-225 (316)
134 cd01311 PDC_hydrolase 2-pyrone 97.8 0.0064 1.4E-07 56.4 21.8 50 185-237 83-132 (263)
135 COG1099 Predicted metal-depend 97.8 0.00033 7.2E-09 60.9 11.7 168 107-316 2-186 (254)
136 cd01321 ADGF Adenosine deamina 97.2 0.054 1.2E-06 52.2 19.4 109 212-370 176-288 (345)
137 PTZ00124 adenosine deaminase; 97.0 0.025 5.4E-07 54.7 15.3 131 215-419 206-340 (362)
138 cd00443 ADA_AMPD Adenosine/AMP 96.8 0.085 1.8E-06 50.0 16.6 103 213-370 151-256 (305)
139 PF00449 Urease_alpha: Urease 96.6 0.0031 6.7E-08 48.7 4.2 37 52-88 65-101 (121)
140 PF04909 Amidohydro_2: Amidohy 96.3 0.089 1.9E-06 48.6 13.3 182 181-426 83-270 (273)
141 PF00962 A_deaminase: Adenosin 95.8 0.059 1.3E-06 51.8 9.8 131 181-368 146-281 (331)
142 COG2159 Predicted metal-depend 94.8 2.4 5.3E-05 39.9 16.7 55 182-237 112-166 (293)
143 COG1816 Add Adenosine deaminas 94.7 0.94 2E-05 43.3 13.6 108 211-371 181-289 (345)
144 COG4464 CapC Capsular polysacc 94.2 0.72 1.6E-05 40.3 10.6 40 107-146 1-41 (254)
145 COG0826 Collagenase and relate 93.2 0.93 2E-05 43.6 10.6 113 183-308 14-138 (347)
146 COG3618 Predicted metal-depend 92.6 8.6 0.00019 35.5 20.8 22 215-236 124-145 (279)
147 cd01308 Isoaspartyl-dipeptidas 92.1 3 6.5E-05 40.9 13.1 72 252-324 154-229 (387)
148 TIGR01431 adm_rel adenosine de 91.6 7 0.00015 39.5 15.0 62 287-369 351-413 (479)
149 COG1831 Predicted metal-depend 91.4 10 0.00022 34.6 14.1 66 348-426 214-279 (285)
150 KOG1097 Adenine deaminase/aden 91.2 7.7 0.00017 37.6 13.9 102 213-368 225-329 (399)
151 COG5016 Pyruvate/oxaloacetate 88.9 12 0.00025 36.4 12.9 127 127-257 100-229 (472)
152 PRK08392 hypothetical protein; 88.5 17 0.00038 32.3 16.6 177 108-317 1-184 (215)
153 PRK12330 oxaloacetate decarbox 88.5 12 0.00026 37.9 13.5 126 127-257 99-230 (499)
154 PRK14042 pyruvate carboxylase 86.9 17 0.00036 37.8 13.8 124 127-254 98-224 (596)
155 PRK10657 isoaspartyl dipeptida 85.9 3.3 7.2E-05 40.6 8.2 89 254-366 158-250 (388)
156 PRK12581 oxaloacetate decarbox 85.8 24 0.00052 35.4 13.9 125 127-256 107-235 (468)
157 PRK01060 endonuclease IV; Prov 85.7 30 0.00065 32.1 15.6 113 187-317 16-149 (281)
158 smart00518 AP2Ec AP endonuclea 84.7 33 0.00071 31.6 14.8 112 186-316 14-142 (273)
159 PRK08508 biotin synthase; Prov 84.3 10 0.00022 35.4 10.1 126 182-309 43-181 (279)
160 TIGR01496 DHPS dihydropteroate 82.5 17 0.00037 33.4 10.7 63 182-245 23-92 (257)
161 PRK12331 oxaloacetate decarbox 81.8 33 0.00071 34.4 13.1 123 128-255 99-225 (448)
162 PRK08609 hypothetical protein; 81.4 67 0.0015 33.4 15.7 47 271-317 480-528 (570)
163 PRK03170 dihydrodipicolinate s 79.6 29 0.00064 32.5 11.6 111 194-304 33-152 (292)
164 PRK09248 putative hydrolase; V 79.1 50 0.0011 30.0 15.0 34 107-143 4-37 (246)
165 cd00408 DHDPS-like Dihydrodipi 79.1 34 0.00073 31.8 11.7 112 194-305 29-149 (281)
166 cd00952 CHBPH_aldolase Trans-o 78.9 35 0.00075 32.4 11.8 109 194-304 40-160 (309)
167 PRK07709 fructose-bisphosphate 78.8 57 0.0012 30.5 12.9 49 185-236 158-211 (285)
168 PF03932 CutC: CutC family; I 78.7 46 0.001 29.3 11.8 118 130-253 12-141 (201)
169 cd00950 DHDPS Dihydrodipicolin 78.0 31 0.00068 32.1 11.2 102 188-292 27-135 (284)
170 cd01301 rDP_like renal dipepti 77.9 64 0.0014 30.6 18.0 52 361-426 258-309 (309)
171 TIGR03249 KdgD 5-dehydro-4-deo 77.7 63 0.0014 30.4 13.3 112 194-305 37-153 (296)
172 PRK14041 oxaloacetate decarbox 77.1 38 0.00082 34.1 11.8 127 124-254 93-223 (467)
173 PRK03620 5-dehydro-4-deoxygluc 76.4 70 0.0015 30.2 13.5 109 194-304 39-154 (303)
174 PRK12738 kbaY tagatose-bisphos 76.0 67 0.0015 30.0 12.4 49 185-236 157-210 (286)
175 PRK15108 biotin synthase; Prov 75.9 41 0.00088 32.5 11.5 121 182-306 79-212 (345)
176 cd00951 KDGDH 5-dehydro-4-deox 75.9 49 0.0011 31.0 11.8 112 194-305 32-148 (289)
177 PRK06361 hypothetical protein; 75.1 34 0.00073 30.3 10.1 54 352-426 154-207 (212)
178 PRK07945 hypothetical protein; 75.1 81 0.0018 30.3 18.5 34 106-143 96-129 (335)
179 PRK15446 phosphonate metabolis 75.1 12 0.00027 36.6 7.8 44 210-257 209-253 (383)
180 cd00947 TBP_aldolase_IIB Tagat 74.1 76 0.0016 29.5 12.2 49 185-236 150-204 (276)
181 PLN02417 dihydrodipicolinate s 72.8 24 0.00053 32.9 8.9 43 194-236 33-78 (280)
182 PRK09195 gatY tagatose-bisphos 72.8 83 0.0018 29.4 12.3 49 185-236 157-210 (284)
183 TIGR03551 F420_cofH 7,8-dideme 72.4 41 0.00088 32.4 10.6 124 181-307 72-221 (343)
184 TIGR03849 arch_ComA phosphosul 72.2 16 0.00035 33.0 7.1 96 195-317 23-123 (237)
185 PRK13352 thiamine biosynthesis 72.0 1E+02 0.0023 30.2 15.7 52 270-322 206-273 (431)
186 PRK12737 gatY tagatose-bisphos 72.0 87 0.0019 29.3 12.4 49 185-236 157-210 (284)
187 TIGR00674 dapA dihydrodipicoli 71.6 68 0.0015 29.9 11.7 110 194-305 30-150 (285)
188 PTZ00372 endonuclease 4-like p 71.3 1.1E+02 0.0024 30.3 16.9 79 154-236 116-200 (413)
189 PF00701 DHDPS: Dihydrodipicol 70.4 27 0.00058 32.7 8.7 43 194-236 33-78 (289)
190 PRK08610 fructose-bisphosphate 69.9 97 0.0021 29.0 12.8 49 185-236 158-211 (286)
191 TIGR01858 tag_bisphos_ald clas 69.5 99 0.0021 28.9 12.2 50 185-237 155-209 (282)
192 TIGR00683 nanA N-acetylneurami 68.8 86 0.0019 29.4 11.7 110 194-305 32-154 (290)
193 TIGR02313 HpaI-NOT-DapA 2,4-di 68.5 1.1E+02 0.0023 28.8 14.0 109 194-304 32-152 (294)
194 TIGR01108 oadA oxaloacetate de 67.9 1.2E+02 0.0025 31.8 13.2 179 123-305 89-270 (582)
195 COG2108 Uncharacterized conser 66.7 1.2E+02 0.0025 28.9 11.5 35 270-304 231-266 (353)
196 KOG3020 TatD-related DNase [Re 66.5 90 0.002 29.3 10.9 136 97-237 8-157 (296)
197 PRK08444 hypothetical protein; 66.1 1.3E+02 0.0029 29.1 13.2 123 182-307 83-231 (353)
198 PF02679 ComA: (2R)-phospho-3- 65.4 99 0.0022 28.2 10.7 95 195-316 36-135 (244)
199 cd00019 AP2Ec AP endonuclease 65.4 1.1E+02 0.0025 28.1 14.1 43 193-235 20-66 (279)
200 PRK12999 pyruvate carboxylase; 65.2 1.1E+02 0.0024 34.9 13.2 121 131-254 633-761 (1146)
201 COG0329 DapA Dihydrodipicolina 65.0 1.3E+02 0.0027 28.4 13.1 120 184-305 26-156 (299)
202 PRK09282 pyruvate carboxylase 64.8 1E+02 0.0022 32.2 12.2 121 129-254 100-224 (592)
203 TIGR01235 pyruv_carbox pyruvat 64.7 92 0.002 35.3 12.5 109 129-240 629-744 (1143)
204 PRK07998 gatY putative fructos 64.2 93 0.002 29.1 10.6 49 185-236 155-207 (283)
205 PRK14040 oxaloacetate decarbox 64.2 1.5E+02 0.0032 31.1 13.1 123 128-254 100-225 (593)
206 cd07937 DRE_TIM_PC_TC_5S Pyruv 64.0 1.2E+02 0.0027 28.0 12.4 107 130-240 96-204 (275)
207 TIGR00126 deoC deoxyribose-pho 63.8 1.1E+02 0.0023 27.3 12.0 109 120-237 13-126 (211)
208 PRK07328 histidinol-phosphatas 63.8 1.2E+02 0.0027 27.9 16.5 48 270-317 177-231 (269)
209 COG1387 HIS2 Histidinol phosph 63.3 1.2E+02 0.0025 27.5 13.9 33 107-143 2-34 (237)
210 cd00953 KDG_aldolase KDG (2-ke 63.1 1.3E+02 0.0028 28.0 13.4 108 194-305 31-147 (279)
211 PLN02389 biotin synthase 62.5 71 0.0015 31.3 10.0 121 182-306 119-254 (379)
212 PRK04147 N-acetylneuraminate l 62.0 1.3E+02 0.0029 28.1 11.6 110 194-305 35-156 (293)
213 TIGR02318 phosphono_phnM phosp 61.3 31 0.00067 33.7 7.4 41 213-257 207-248 (376)
214 TIGR03699 mena_SCO4550 menaqui 61.0 1.5E+02 0.0033 28.4 12.1 124 182-308 75-224 (340)
215 cd00959 DeoC 2-deoxyribose-5-p 60.9 1.2E+02 0.0025 26.7 12.3 101 121-233 13-121 (203)
216 PF01791 DeoC: DeoC/LacD famil 59.7 43 0.00093 30.3 7.6 104 126-235 20-132 (236)
217 PRK11572 copper homeostasis pr 59.4 1.4E+02 0.0031 27.2 19.5 174 131-315 14-199 (248)
218 PRK05835 fructose-bisphosphate 58.9 1.6E+02 0.0036 27.8 12.6 48 185-235 157-211 (307)
219 PF01116 F_bP_aldolase: Fructo 58.7 95 0.0021 29.1 9.8 50 185-236 157-213 (287)
220 PRK08005 epimerase; Validated 58.6 1.3E+02 0.0029 26.7 11.5 46 186-235 17-65 (210)
221 PRK15452 putative protease; Pr 58.5 1.7E+02 0.0036 29.4 12.0 49 185-234 13-65 (443)
222 cd00954 NAL N-Acetylneuraminic 57.4 1.7E+02 0.0036 27.4 12.0 110 194-305 32-154 (288)
223 PF04273 DUF442: Putative phos 57.3 55 0.0012 25.7 6.8 48 188-238 49-96 (110)
224 PRK06256 biotin synthase; Vali 56.3 74 0.0016 30.4 9.0 40 270-309 187-231 (336)
225 PRK08185 hypothetical protein; 54.9 1.8E+02 0.004 27.1 12.0 103 181-285 22-124 (283)
226 TIGR00167 cbbA ketose-bisphosp 54.6 1.9E+02 0.0041 27.2 11.8 122 128-253 90-230 (288)
227 PRK06015 keto-hydroxyglutarate 54.5 1.3E+02 0.0028 26.5 9.4 98 122-241 13-110 (201)
228 PF01244 Peptidase_M19: Membra 54.4 56 0.0012 31.2 7.6 112 283-425 194-316 (320)
229 PRK09856 fructoselysine 3-epim 53.9 1.8E+02 0.0039 26.7 13.9 47 187-234 18-66 (275)
230 COG0036 Rpe Pentose-5-phosphat 53.6 1.7E+02 0.0036 26.2 11.0 49 186-238 20-73 (220)
231 PRK13397 3-deoxy-7-phosphohept 53.4 1.8E+02 0.0039 26.6 12.6 64 181-244 27-95 (250)
232 cd00950 DHDPS Dihydrodipicolin 52.6 1.9E+02 0.0042 26.7 12.3 110 120-235 16-133 (284)
233 PRK12857 fructose-1,6-bisphosp 52.5 2E+02 0.0044 26.9 12.3 49 185-236 157-210 (284)
234 PF02811 PHP: PHP domain; Int 51.7 13 0.00029 31.3 2.8 33 108-143 1-34 (175)
235 COG0320 LipA Lipoate synthase 51.6 75 0.0016 29.4 7.4 76 153-229 199-281 (306)
236 TIGR00587 nfo apurinic endonuc 51.2 2E+02 0.0044 26.5 14.4 83 186-292 15-110 (274)
237 cd00408 DHDPS-like Dihydrodipi 50.8 2.1E+02 0.0045 26.5 12.3 110 120-235 13-130 (281)
238 PRK02227 hypothetical protein; 50.4 2E+02 0.0043 26.1 9.9 94 131-227 13-111 (238)
239 PRK07535 methyltetrahydrofolat 50.1 2E+02 0.0044 26.5 10.4 113 185-308 28-152 (261)
240 TIGR01182 eda Entner-Doudoroff 49.9 1.8E+02 0.0038 25.8 9.5 98 122-241 17-114 (204)
241 TIGR00284 dihydropteroate synt 49.8 3E+02 0.0065 28.1 13.2 117 183-315 166-288 (499)
242 PRK09195 gatY tagatose-bisphos 49.6 2.3E+02 0.0049 26.6 11.8 103 181-285 27-130 (284)
243 COG1060 ThiH Thiamine biosynth 49.4 2.6E+02 0.0057 27.3 13.5 116 121-241 89-230 (370)
244 PF01261 AP_endonuc_2: Xylose 49.2 38 0.00081 29.4 5.4 112 194-319 6-137 (213)
245 PRK07084 fructose-bisphosphate 49.0 1.9E+02 0.004 27.6 10.0 105 128-234 98-223 (321)
246 PF01261 AP_endonuc_2: Xylose 48.2 1.8E+02 0.0038 25.0 11.2 90 184-293 28-135 (213)
247 PRK12737 gatY tagatose-bisphos 48.1 2.4E+02 0.0052 26.4 12.1 130 181-312 27-173 (284)
248 TIGR01429 AMP_deaminase AMP de 47.8 2.4E+02 0.0051 29.6 11.2 17 352-368 506-522 (611)
249 PF01081 Aldolase: KDPG and KH 47.4 2E+02 0.0043 25.3 9.8 99 122-242 17-115 (196)
250 PRK03620 5-dehydro-4-deoxygluc 46.7 2.6E+02 0.0055 26.4 11.9 109 120-235 23-139 (303)
251 PRK00912 ribonuclease P protei 45.7 36 0.00079 30.8 4.8 53 352-426 160-213 (237)
252 TIGR03249 KdgD 5-dehydro-4-deo 45.5 2.6E+02 0.0057 26.2 11.9 109 120-235 21-137 (296)
253 PF14871 GHL6: Hypothetical gl 45.0 71 0.0015 26.0 5.8 48 188-235 5-64 (132)
254 PRK12738 kbaY tagatose-bisphos 44.8 2.7E+02 0.0058 26.1 12.3 130 181-312 27-173 (286)
255 PF00834 Ribul_P_3_epim: Ribul 44.8 2.2E+02 0.0047 25.1 10.1 96 185-318 15-116 (201)
256 cd00952 CHBPH_aldolase Trans-o 44.2 2.8E+02 0.0061 26.2 12.2 109 120-234 24-141 (309)
257 PRK08091 ribulose-phosphate 3- 43.6 2.5E+02 0.0054 25.3 10.5 45 185-235 28-75 (228)
258 PRK07998 gatY putative fructos 43.3 2.8E+02 0.0061 25.9 13.6 130 181-312 27-171 (283)
259 PRK06801 hypothetical protein; 43.2 2.8E+02 0.0062 25.9 12.1 104 181-286 27-131 (286)
260 PRK13209 L-xylulose 5-phosphat 43.1 2.7E+02 0.0058 25.6 15.2 45 189-233 27-75 (283)
261 TIGR00190 thiC thiamine biosyn 42.8 3.4E+02 0.0074 26.7 16.8 20 129-148 81-100 (423)
262 COG2876 AroA 3-deoxy-D-arabino 42.7 2.8E+02 0.006 25.6 10.7 70 177-246 53-127 (286)
263 TIGR02109 PQQ_syn_pqqE coenzym 42.7 3.2E+02 0.0069 26.3 12.6 40 270-309 132-175 (358)
264 TIGR01858 tag_bisphos_ald clas 42.4 2.9E+02 0.0063 25.8 12.2 130 181-312 25-171 (282)
265 PRK08883 ribulose-phosphate 3- 42.1 2.5E+02 0.0055 25.0 11.8 47 186-235 16-65 (220)
266 PRK04208 rbcL ribulose bisopho 41.7 3.2E+02 0.007 27.6 10.9 110 122-237 173-290 (468)
267 PF03102 NeuB: NeuB family; I 41.7 1E+02 0.0022 28.0 6.9 70 212-292 53-122 (241)
268 PRK07114 keto-hydroxyglutarate 41.6 1.9E+02 0.0042 25.9 8.5 100 122-241 24-125 (222)
269 COG0191 Fba Fructose/tagatose 41.5 3E+02 0.0065 25.7 11.8 104 181-286 27-132 (286)
270 TIGR03326 rubisco_III ribulose 41.3 3.4E+02 0.0074 26.9 10.9 110 122-237 157-273 (412)
271 PRK05301 pyrroloquinoline quin 41.2 3.5E+02 0.0075 26.3 13.1 42 270-311 141-186 (378)
272 TIGR00542 hxl6Piso_put hexulos 40.7 2.9E+02 0.0064 25.4 13.9 46 187-232 20-69 (279)
273 cd01319 AMPD AMP deaminase (AM 40.4 2E+02 0.0042 29.4 9.2 18 352-369 394-411 (496)
274 COG0800 Eda 2-keto-3-deoxy-6-p 40.4 2.2E+02 0.0049 25.2 8.5 97 123-241 23-119 (211)
275 PF05853 DUF849: Prokaryotic p 40.2 3.1E+02 0.0066 25.4 12.3 184 122-313 23-226 (272)
276 TIGR00674 dapA dihydrodipicoli 40.2 3.1E+02 0.0067 25.5 12.0 110 120-235 14-131 (285)
277 TIGR03569 NeuB_NnaB N-acetylne 40.2 1.5E+02 0.0033 28.3 8.2 86 212-308 73-160 (329)
278 PRK14042 pyruvate carboxylase 40.0 4.6E+02 0.01 27.5 19.9 180 122-311 23-226 (596)
279 PRK09875 putative hydrolase; P 40.0 1.3E+02 0.0027 28.4 7.5 44 265-309 134-178 (292)
280 TIGR01949 AroFGH_arch predicte 39.8 1.8E+02 0.0039 26.6 8.5 108 123-236 34-144 (258)
281 PRK09234 fbiC FO synthase; Rev 39.2 5.6E+02 0.012 28.2 13.9 124 182-308 560-709 (843)
282 cd00951 KDGDH 5-dehydro-4-deox 38.9 3.3E+02 0.0071 25.4 12.2 109 120-235 16-132 (289)
283 cd00945 Aldolase_Class_I Class 38.9 2.5E+02 0.0053 23.9 12.0 105 123-236 11-121 (201)
284 cd08205 RuBisCO_IV_RLP Ribulos 37.9 2.8E+02 0.0061 27.0 9.8 107 122-237 143-256 (367)
285 PF00701 DHDPS: Dihydrodipicol 37.7 3.4E+02 0.0073 25.2 12.3 109 120-235 17-134 (289)
286 TIGR03700 mena_SCO4494 putativ 37.1 3.9E+02 0.0085 25.7 11.3 124 182-308 82-231 (351)
287 COG0502 BioB Biotin synthase a 36.9 2.7E+02 0.0059 26.7 9.1 64 194-260 98-162 (335)
288 KOG4127 Renal dipeptidase [Pos 36.8 4E+02 0.0087 25.8 10.9 38 283-320 266-311 (419)
289 COG2355 Zn-dependent dipeptida 36.7 3.8E+02 0.0082 25.5 14.8 29 396-425 277-305 (313)
290 COG1820 NagA N-acetylglucosami 36.4 3.3E+02 0.0072 26.6 9.7 52 183-239 74-130 (380)
291 cd07944 DRE_TIM_HOA_like 4-hyd 36.0 3.5E+02 0.0076 24.9 10.6 103 131-240 88-195 (266)
292 PRK08745 ribulose-phosphate 3- 35.8 3.3E+02 0.007 24.5 11.2 47 186-235 20-69 (223)
293 PRK12858 tagatose 1,6-diphosph 35.3 4.2E+02 0.009 25.5 12.7 46 188-234 112-162 (340)
294 PRK03170 dihydrodipicolinate s 35.1 3.8E+02 0.0081 25.0 12.0 109 120-234 17-133 (292)
295 PLN03055 AMP deaminase; Provis 34.8 1.3E+02 0.0027 31.4 7.0 59 288-369 442-501 (602)
296 TIGR00423 radical SAM domain p 34.7 4E+02 0.0086 25.1 13.9 123 182-307 39-187 (309)
297 TIGR01859 fruc_bis_ald_ fructo 34.6 3.9E+02 0.0084 25.0 10.5 104 128-234 87-206 (282)
298 cd08213 RuBisCO_large_III Ribu 34.6 3.7E+02 0.0081 26.7 10.0 110 122-237 144-260 (412)
299 CHL00040 rbcL ribulose-1,5-bis 34.5 4.1E+02 0.009 26.9 10.4 110 122-237 180-297 (475)
300 PRK13210 putative L-xylulose 5 34.3 3.7E+02 0.008 24.6 14.0 46 187-232 20-69 (284)
301 PRK14057 epimerase; Provisiona 34.2 3.7E+02 0.0081 24.7 10.5 61 185-254 35-100 (254)
302 COG0159 TrpA Tryptophan syntha 33.8 3.9E+02 0.0084 24.7 12.0 160 126-362 63-232 (265)
303 PRK07360 FO synthase subunit 2 33.6 4.6E+02 0.0099 25.5 13.8 123 182-307 94-243 (371)
304 PRK08185 hypothetical protein; 33.2 2.6E+02 0.0056 26.2 8.3 24 212-235 21-44 (283)
305 PF04476 DUF556: Protein of un 33.2 3.7E+02 0.008 24.3 10.6 94 131-227 13-111 (235)
306 cd08210 RLP_RrRLP Ribulose bis 33.1 4.4E+02 0.0096 25.6 10.2 105 122-235 138-250 (364)
307 PRK08195 4-hyroxy-2-oxovalerat 33.0 4.5E+02 0.0098 25.2 11.4 103 131-239 94-200 (337)
308 PRK05692 hydroxymethylglutaryl 32.1 4.3E+02 0.0093 24.7 10.1 55 182-239 154-210 (287)
309 PRK05927 hypothetical protein; 32.1 4.8E+02 0.01 25.2 10.9 121 182-305 79-225 (350)
310 TIGR02631 xylA_Arthro xylose i 32.0 5E+02 0.011 25.5 13.2 98 183-291 33-136 (382)
311 COG2108 Uncharacterized conser 32.0 3.2E+02 0.007 26.0 8.5 71 215-286 94-167 (353)
312 PF10566 Glyco_hydro_97: Glyco 31.8 2.2E+02 0.0047 26.5 7.5 111 123-235 30-157 (273)
313 cd00954 NAL N-Acetylneuraminic 31.7 4.3E+02 0.0092 24.6 13.1 109 120-234 16-134 (288)
314 PLN02858 fructose-bisphosphate 31.6 5.6E+02 0.012 30.0 12.2 51 185-235 1252-1308(1378)
315 COG1456 CdhE CO dehydrogenase/ 31.6 4.4E+02 0.0095 25.5 9.3 89 212-309 143-232 (467)
316 TIGR00683 nanA N-acetylneurami 31.4 4.4E+02 0.0095 24.6 12.8 110 120-234 16-134 (290)
317 PTZ00310 AMP deaminase; Provis 31.2 1.5E+02 0.0032 34.2 7.2 18 352-369 548-565 (1453)
318 cd07938 DRE_TIM_HMGL 3-hydroxy 31.2 4.3E+02 0.0093 24.5 10.3 54 183-239 149-204 (274)
319 PRK09234 fbiC FO synthase; Rev 30.9 4.2E+02 0.009 29.2 10.5 128 122-252 557-708 (843)
320 PF07287 DUF1446: Protein of u 30.5 5.2E+02 0.011 25.2 10.2 66 215-308 58-123 (362)
321 PRK08444 hypothetical protein; 30.4 5.1E+02 0.011 25.1 12.0 127 122-251 80-230 (353)
322 PRK07807 inosine 5-monophospha 30.2 4.6E+02 0.01 26.6 10.1 98 128-234 229-336 (479)
323 PLN02417 dihydrodipicolinate s 30.2 4.5E+02 0.0097 24.4 13.0 108 120-234 17-131 (280)
324 COG2200 Rtn c-di-GMP phosphodi 30.1 2.2E+02 0.0047 26.1 7.3 50 213-266 191-241 (256)
325 PRK06806 fructose-bisphosphate 29.1 4.8E+02 0.01 24.3 12.6 110 181-292 27-139 (281)
326 PRK11858 aksA trans-homoaconit 28.9 5.2E+02 0.011 25.2 10.1 58 181-241 143-201 (378)
327 COG5016 Pyruvate/oxaloacetate 28.9 5.8E+02 0.013 25.2 14.7 178 125-311 28-228 (472)
328 COG0269 SgbH 3-hexulose-6-phos 28.8 4.2E+02 0.0091 23.6 11.5 52 194-251 78-129 (217)
329 COG0329 DapA Dihydrodipicolina 28.8 5E+02 0.011 24.4 13.3 110 120-235 20-137 (299)
330 COG0413 PanB Ketopantoate hydr 28.8 2.3E+02 0.005 26.0 6.8 53 180-241 91-144 (268)
331 TIGR03586 PseI pseudaminic aci 28.6 3.1E+02 0.0067 26.3 8.1 93 212-315 74-169 (327)
332 cd08148 RuBisCO_large Ribulose 28.5 5.6E+02 0.012 25.0 9.9 109 122-237 140-255 (366)
333 PTZ00170 D-ribulose-5-phosphat 28.5 4.3E+02 0.0094 23.6 10.3 47 186-235 23-72 (228)
334 cd08212 RuBisCO_large_I Ribulo 28.3 6.1E+02 0.013 25.5 10.4 109 122-237 158-274 (450)
335 PRK06552 keto-hydroxyglutarate 28.2 4.3E+02 0.0092 23.5 9.8 100 122-241 22-122 (213)
336 PRK12857 fructose-1,6-bisphosp 28.0 5.1E+02 0.011 24.3 12.3 103 181-285 27-130 (284)
337 COG0075 Serine-pyruvate aminot 27.8 2.1E+02 0.0047 28.0 7.0 79 186-293 93-171 (383)
338 TIGR03217 4OH_2_O_val_ald 4-hy 27.6 5.5E+02 0.012 24.6 12.0 103 131-239 93-199 (333)
339 COG1168 MalY Bifunctional PLP- 27.5 2.1E+02 0.0044 27.9 6.6 48 185-233 147-196 (388)
340 COG0191 Fba Fructose/tagatose 27.5 5.2E+02 0.011 24.2 12.1 49 186-237 159-213 (286)
341 smart00481 POLIIIAc DNA polyme 27.5 80 0.0017 21.8 3.1 32 109-143 1-33 (67)
342 PLN02768 AMP deaminase 27.1 1.8E+02 0.0038 31.4 6.6 19 351-369 716-734 (835)
343 PRK14040 oxaloacetate decarbox 27.0 7.5E+02 0.016 25.9 21.0 180 122-311 24-227 (593)
344 cd00953 KDG_aldolase KDG (2-ke 27.0 5.1E+02 0.011 24.0 14.1 106 120-234 15-127 (279)
345 COG0134 TrpC Indole-3-glycerol 26.9 2.4E+02 0.0053 25.8 6.7 46 194-244 127-172 (254)
346 cd00947 TBP_aldolase_IIB Tagat 26.7 5.3E+02 0.011 24.0 12.1 102 182-285 23-125 (276)
347 PF01964 ThiC: ThiC family; I 26.6 3.9E+02 0.0085 26.3 8.3 53 269-322 201-269 (420)
348 cd08206 RuBisCO_large_I_II_III 26.6 6.5E+02 0.014 25.0 10.5 110 122-237 145-262 (414)
349 KOG2550 IMP dehydrogenase/GMP 26.6 6.4E+02 0.014 25.0 10.7 202 96-304 30-284 (503)
350 PRK05588 histidinol-phosphatas 26.5 62 0.0013 29.6 3.0 34 107-143 1-34 (255)
351 cd00740 MeTr MeTr subgroup of 26.5 3.9E+02 0.0084 24.5 8.2 101 182-291 26-127 (252)
352 PF01116 F_bP_aldolase: Fructo 25.7 1.8E+02 0.0039 27.3 5.9 19 297-315 117-135 (287)
353 cd08209 RLP_DK-MTP-1-P-enolase 25.1 5.9E+02 0.013 25.1 9.5 109 122-237 137-252 (391)
354 TIGR02313 HpaI-NOT-DapA 2,4-di 25.1 5.7E+02 0.012 23.9 12.1 110 120-234 16-133 (294)
355 PRK15447 putative protease; Pr 25.0 5.8E+02 0.013 24.0 11.6 50 185-234 17-67 (301)
356 PRK13663 hypothetical protein; 24.8 2.9E+02 0.0063 27.3 7.0 86 227-315 392-484 (493)
357 PRK04147 N-acetylneuraminate l 24.5 5.8E+02 0.013 23.8 12.8 110 120-235 19-137 (293)
358 PRK00912 ribonuclease P protei 24.3 70 0.0015 28.9 2.9 32 107-143 3-34 (237)
359 PRK13398 3-deoxy-7-phosphohept 24.2 5.7E+02 0.012 23.6 15.3 32 213-244 76-107 (266)
360 PRK13404 dihydropyrimidinase; 24.0 7.6E+02 0.016 24.9 12.2 40 213-253 219-259 (477)
361 PTZ00310 AMP deaminase; Provis 23.9 1.9E+02 0.0041 33.4 6.4 18 352-369 1177-1194(1453)
362 PF00016 RuBisCO_large: Ribulo 23.7 6.4E+02 0.014 23.9 9.9 111 122-238 27-145 (309)
363 TIGR03234 OH-pyruv-isom hydrox 23.6 5.4E+02 0.012 23.1 12.5 20 270-289 123-142 (254)
364 PRK08508 biotin synthase; Prov 23.6 5.9E+02 0.013 23.6 13.5 125 122-254 40-181 (279)
365 PRK00979 tetrahydromethanopter 23.6 4.7E+02 0.01 24.8 8.2 64 186-256 59-124 (308)
366 PRK06886 hypothetical protein; 23.3 6.4E+02 0.014 24.1 9.3 104 182-314 161-279 (329)
367 PLN02858 fructose-bisphosphate 23.0 9.8E+02 0.021 28.1 12.1 71 214-285 1155-1225(1378)
368 COG1809 (2R)-phospho-3-sulfola 22.4 5.7E+02 0.012 23.0 9.4 15 408-422 231-245 (258)
369 TIGR03581 EF_0839 conserved hy 22.3 5.7E+02 0.012 22.9 8.8 40 189-231 141-180 (236)
370 PRK12581 oxaloacetate decarbox 22.2 8.3E+02 0.018 24.7 18.5 180 122-311 32-235 (468)
371 cd03174 DRE_TIM_metallolyase D 22.2 5.8E+02 0.013 23.0 17.9 175 123-311 17-219 (265)
372 PRK09248 putative hydrolase; V 22.2 5.8E+02 0.013 22.9 8.9 19 349-367 175-193 (246)
373 PF07071 DUF1341: Protein of u 22.2 3.8E+02 0.0082 23.7 6.6 41 188-231 140-180 (218)
374 TIGR01856 hisJ_fam histidinol 22.0 98 0.0021 28.3 3.4 33 108-143 1-33 (253)
375 PRK00311 panB 3-methyl-2-oxobu 22.0 4.7E+02 0.01 24.2 7.8 49 182-239 93-142 (264)
376 TIGR01303 IMP_DH_rel_1 IMP deh 21.8 8.5E+02 0.018 24.7 10.4 98 128-234 227-334 (475)
377 COG1679 Predicted aconitase [G 21.7 6.2E+02 0.013 24.7 8.5 106 210-316 225-357 (403)
378 KOG3462 Predicted membrane pro 21.4 82 0.0018 23.6 2.2 22 1-22 41-62 (105)
379 PRK09722 allulose-6-phosphate 21.3 6.1E+02 0.013 22.8 11.8 45 186-235 19-66 (229)
380 PF07745 Glyco_hydro_53: Glyco 20.9 2.3E+02 0.0051 27.2 5.7 49 187-235 28-80 (332)
381 PRK07226 fructose-bisphosphate 20.9 6.6E+02 0.014 23.1 11.9 107 123-235 37-146 (267)
382 TIGR01235 pyruv_carbox pyruvat 20.7 1.3E+03 0.028 26.5 18.3 150 152-311 590-761 (1143)
383 TIGR01362 KDO8P_synth 3-deoxy- 20.6 6.7E+02 0.015 23.1 12.7 32 214-245 59-90 (258)
384 PRK08445 hypothetical protein; 20.4 7.8E+02 0.017 23.7 13.6 122 182-306 76-223 (348)
385 COG3033 TnaA Tryptophanase [Am 20.2 2.6E+02 0.0056 27.2 5.7 52 184-235 170-226 (471)
386 COG1038 PycA Pyruvate carboxyl 20.2 1.2E+03 0.025 25.7 11.1 150 154-311 597-766 (1149)
387 PF11068 YlqD: YlqD protein; 20.1 90 0.002 25.4 2.4 14 70-83 117-130 (131)
388 PF10509 GalKase_gal_bdg: Gala 20.0 48 0.001 22.1 0.7 34 73-115 15-48 (52)
No 1
>PLN02942 dihydropyrimidinase
Probab=100.00 E-value=1.3e-58 Score=463.93 Aligned_cols=375 Identities=86% Similarity=1.335 Sum_probs=325.8
Q ss_pred CccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHH
Q 014320 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQ 131 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~ 131 (427)
+.+++|+|++|++++....++|+|+||||++|++....+.+.++||++|++|+|||||+|+|+.+++.+..+++++.+++
T Consensus 4 ~~~lli~~~~v~~~~~~~~~~i~I~~g~I~~i~~~~~~~~~~~~iD~~g~~v~PG~ID~H~H~~~~~~~~~~~ed~~s~s 83 (486)
T PLN02942 4 STKILIKGGTVVNAHHQELADVYVEDGIIVAVAPNLKVPDDVRVIDATGKFVMPGGIDPHTHLAMPFMGTETIDDFFSGQ 83 (486)
T ss_pred CCcEEEECcEEEcCCCCeEeEEEEECCEEEEEcCCCCCCCCCeEEECCCCEEecCEeeeeeccCcccCCCcccchHHHHH
Confidence 46789999999997766778999999999999876432335689999999999999999999998754566789999999
Q ss_pred HHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecCCCcc
Q 014320 132 AAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFM 211 (427)
Q Consensus 132 ~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~ 211 (427)
++++++||||+.||..+......+.++...+...+..++++++.+.........+++.++.+..|+.++|+|+++++...
T Consensus 84 ~aAl~gGvTTv~D~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~e~~~l~~~~gv~~~k~~~~~~~~~~ 163 (486)
T PLN02942 84 AAALAGGTTMHIDFVIPVNGNLLAGYEAYEKKAEKSCMDYGFHMAITKWDDTVSRDMETLVKEKGINSFKFFMAYKGSLM 163 (486)
T ss_pred HHHHcCCCeEEEeCCCCCCCCHHHHHHHHHHHHhhcCCCEEEEEEecCCcHhHHHHHHHHHHhCCCceEEEEEecCCCCC
Confidence 99999999999999655443446667666666666678887765544433334566777765568889999998877777
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcC
Q 014320 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (427)
Q Consensus 212 ~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~ 291 (427)
++++.+.+.++.++++|.++++|+|+.+.+....+++.+.|..++..|...||..+|..++.+++.+++..++++|++|+
T Consensus 164 ~~~~~l~~~~~~a~~~~~~v~~HaE~~~~~~~~~~~~~~~G~~~~~~~~~~rP~~~E~~av~~~~~la~~~g~~~~i~H~ 243 (486)
T PLN02942 164 VTDELLLEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATARAIRLAKFVNTPLYVVHV 243 (486)
T ss_pred CCHHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHHHcCCCChhhhhccCCchHHHHHHHHHHHHHHHhCCCEEEEEC
Confidence 88999999999999999999999999988887777888889999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCC
Q 014320 292 MSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF 371 (427)
Q Consensus 292 ~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~ 371 (427)
++.++++.++.+|+.|++|++++|||||+|+++.+.+.+++.++.++++||+|++.++++||+++++|+++++||||+||
T Consensus 244 s~~~~~e~i~~~k~~G~~Vt~e~~ph~L~l~~~~~~~~~~~~~~~~k~~PPlr~~~~~~~L~~~l~~G~i~~igTDh~p~ 323 (486)
T PLN02942 244 MSIDAMEEIARARKSGQRVIGEPVVSGLVLDDSKLWDPDFTIASKYVMSPPIRPAGHGKALQAALSSGILQLVGTDHCPF 323 (486)
T ss_pred CCHHHHHHHHHHHHCCCcEEEEECchhheeCHHHhcCcccccCcceEECCCCCCHHHHHHHHHHhcCCceEEEECCCCCC
Confidence 99999999999999999999999999999998887543444457899999999999999999999999999999999999
Q ss_pred ChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 372 NSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 372 ~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+.+.|.++.++|+.+++|++|+|+.+|++|+.++..+.+++.++++++|.||||+
T Consensus 324 ~~~~k~~~~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~i~~~~~l~~~t~~pA~~ 378 (486)
T PLN02942 324 NSTQKAFGKDDFRKIPNGVNGIEERMHLVWDTMVESGQISPTDYVRVTSTECAKI 378 (486)
T ss_pred ChHHhhcccCCHhhCCCCcccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 9988876556899999999999999999997777777899999999999999985
No 2
>COG0044 PyrC Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism]
Probab=100.00 E-value=1.2e-58 Score=449.48 Aligned_cols=355 Identities=29% Similarity=0.464 Sum_probs=311.5
Q ss_pred cEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHHHH
Q 014320 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAA 133 (427)
Q Consensus 54 ~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~ 133 (427)
+++|+|+++++++....++|.|+||+|++|+.......+.++||++|++|+|||||.|+|+..+ |..++|++.+++++
T Consensus 2 ~~lIk~~~iv~~~~~~~~di~i~~g~I~~Ig~~l~~~~~~~iiD~~g~~v~PG~ID~HVH~rep--g~~~ke~~~tgs~A 79 (430)
T COG0044 2 DLLIKNARVVDPGEDEVADILIKDGKIAAIGKNLEPTSGAEIIDAKGLLVLPGLVDLHVHFREP--GFEHKETFETGSRA 79 (430)
T ss_pred cEEEeccEEEcCCCceEecEEEECCEEEEeccCCCCCCCCcEEECCCCEEccCeeEEEEecCCC--CcchhhhHHHHHHH
Confidence 4799999999996678999999999999999874433567999999999999999999999999 99999999999999
Q ss_pred HHcCCceEEecCcCCCCC-cHHHHHHHHHHHhc-cccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecCCCcc
Q 014320 134 ALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFM 211 (427)
Q Consensus 134 ~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~ 211 (427)
++++|||+++||.++.+. ...+.++.....+. +..+++.++++.+.......+ +.+.. ...++|.|++... ..
T Consensus 80 Aa~GG~Ttv~dmPnt~P~~~~~~~~~~~~~~a~~~~~vd~~~~~~it~~~~~~~~-~~~~~---~~~g~~~F~~~~~-~~ 154 (430)
T COG0044 80 AAAGGVTTVVDMPNTKPPIDTAEALEDKLERAKGKSVVDYAFYGGLTKGNLGKLE-LTERG---VEAGFKGFMDDST-GA 154 (430)
T ss_pred HHcCCceEEEECCCCCCCCCCHHHHHHHHHHhhccceeEEEEEEEEeccccchhh-hhhhh---hccceEEEecCCc-Cc
Confidence 999999999999876544 56667766666665 689999999887765543222 22222 1456788988764 45
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcC
Q 014320 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (427)
Q Consensus 212 ~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~ 291 (427)
.+.+.+++.++.++..|.++.+|+|++..+. ......|...++.|...+|..+|..++.+.+++++.+|+++|++|+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~H~Ed~~~~~---~~~~~~g~~~~~~~~~~~p~~aE~~~iar~~~la~~~g~~vhi~Hi 231 (430)
T COG0044 155 LDDDVLEEALEYAAELGALILVHAEDDDLIA---EGVMNEGLRAPELGLAGRPPIAEASAIARDLELARATGARVHICHI 231 (430)
T ss_pred CCHHHHHHHHHHHHhcCCeEEEecCChhHhh---hHHHhcCccchhhccCCCChHHHHHHHHHHHHHHHHhCCcEEEEEc
Confidence 6889999999999999999999999987654 3345678888899999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCC
Q 014320 292 MSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF 371 (427)
Q Consensus 292 ~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~ 371 (427)
++.++++.++.++..|++|++++|||||+++++++.. .+..+|+|||||++.||++||+++++|++++++|||+||
T Consensus 232 St~~sv~li~~ak~~g~~vt~EvtphHL~l~~~~~~~----~~~~~k~nPPLR~~~dr~aL~~~l~~G~ID~iasDHaPh 307 (430)
T COG0044 232 STKESVELIRAAKAEGIRVTAEVTPHHLLLDEEDIED----LGTLAKVNPPLRDEEDREALWEALKDGVIDVIASDHAPH 307 (430)
T ss_pred CCHHHHHHHHHHhhcCCceEEeecchheEccHhHhhc----cCcceEECCCCCCHHHHHHHHHHHhCCCCcEEEcCCCCC
Confidence 9999999999999999999999999999999988753 247999999999999999999999999999999999999
Q ss_pred ChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 372 NSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 372 ~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+.++|.. +|+.+|+|++|+|+.+|++|+ +++++.+|+.++++++|.||||+
T Consensus 308 t~eeK~~---~f~~ap~G~~glE~~lpl~l~-lv~~g~lsl~~~v~~~S~nPA~i 358 (430)
T COG0044 308 TLEEKRL---PFEEAPSGIPGLETALPLLLT-LVKKGRLSLERLVELLSTNPARI 358 (430)
T ss_pred CHHHhcc---chhhCCCCCccHHHHHHHHHH-HHHcCCcCHHHHHHHHhhCHHHH
Confidence 9999952 599999999999999999996 99999999999999999999986
No 3
>KOG2584 consensus Dihydroorotase and related enzymes [Nucleotide transport and metabolism]
Probab=100.00 E-value=6e-59 Score=426.53 Aligned_cols=375 Identities=57% Similarity=0.934 Sum_probs=356.2
Q ss_pred CccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHH
Q 014320 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQ 131 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~ 131 (427)
...++|+|++|++.+.....+|.++||.|.+|+++...+.+.++||+.|++|+||.||.|+|+.+++.|....++|++++
T Consensus 13 s~rllikgg~vvN~d~~~~aDV~vedGiI~~vg~~l~ipgg~~~ida~g~~ViPGgID~Hthlq~p~~G~ts~DdF~~GT 92 (522)
T KOG2584|consen 13 SNRLLIKGGRVVNDDQSFKADVYVEDGIIKEVGENLIIPGGVKVIDATGKMVIPGGIDPHTHLQMPFMGMTSVDDFFQGT 92 (522)
T ss_pred ccceeeeCCEEEccCCceeeeEEeccCEEEEecccEEcCCCceEEecCCcEEecCccCccceeccccCCccchhhhhccc
Confidence 34589999999999999999999999999999999888888999999999999999999999999999999999999999
Q ss_pred HHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhc-cccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecCCC
Q 014320 132 AAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGS 209 (427)
Q Consensus 132 ~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~ 209 (427)
++|+++|||.++|+..+... ++.+.++.+++.+. +..++|+++++.+.|.+...++++-+.+..|+.+||+||++.+.
T Consensus 93 kAAlaGGtTmiID~vlp~~~~slv~afe~wr~~Ad~k~cCDyglhv~It~W~~~v~eem~~l~~ekGvnsF~~fmayk~~ 172 (522)
T KOG2584|consen 93 KAALAGGTTMIIDFVLPDKGTSLVEAFEKWREWADPKVCCDYGLHVGITWWSPSVKEEMEILVKEKGVNSFKFFMAYKDL 172 (522)
T ss_pred HHHhcCCceEEEEEecCCCCchHHHHHHHHHhhcCCceeeeeeeeEeeeecCcchHHHHHHHhhhcCcceEEeeeeeccc
Confidence 99999999999999877654 78899999998875 68999999999999998888889988878999999999999999
Q ss_pred ccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEE
Q 014320 210 FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV 289 (427)
Q Consensus 210 ~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~ 289 (427)
+++++++|.+.++.+++.|....+|+|+.+.+.+.++++.+.|..+|++|..+||++.|.+|+.+++.++...+|+++++
T Consensus 173 ~~v~d~~lye~l~~~~~lgala~vHAEngd~iae~q~~~l~~gitgPEgh~lSRPee~EaEA~~rai~ia~~~ncPlyvv 252 (522)
T KOG2584|consen 173 YMVRDSELYEALKVCAELGALAMVHAENGDAIAEGQQRLLELGITGPEGHELSRPEELEAEATNRAITIARQANCPLYVV 252 (522)
T ss_pred cccCHHHHHHHHHHHhhcchhheehhhcchhhhhhhhHHHHcCCcCcccccccCchhhhHHHHHHHHHHHHhcCCCcceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcc-cHHHHHHHHhcCCceEEecCC
Q 014320 290 HVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASG-HNKALQAALATGILQLVGTDH 368 (427)
Q Consensus 290 H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~-~~~~l~~~l~~G~~~~lgSD~ 368 (427)
|+.+..+.+.|..+|++|.-|..++....+..+...|++.+|..+..+++.||+|... +.+.||.+|+.|.+...||||
T Consensus 253 hVmsksaa~~Ia~aRk~g~~v~gepita~l~~dg~hy~~~~w~~Aa~~v~sPPlr~d~~t~~~L~~lLa~g~L~~tgSdh 332 (522)
T KOG2584|consen 253 HVMSKSAADAIALARKKGRVVFGEPITASLGTDGSHYWSKDWDHAAAFVTSPPLRPDPTTPDGLMDLLAEGDLQLTGSDH 332 (522)
T ss_pred EEeehhHHHHHHHHHhcCceeecccchhhhcccchhhccCChhhcceeeeCCCCCCCCCCHHHHHHHHhcCccceeecCC
Confidence 9999988999999999998899999888899999999888998889999999999887 789999999999999999999
Q ss_pred CCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 369 CAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 369 ~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+|++.++|..+++||..+|.|+.|+|.|++++|.++|..|++++.++|..+|+|.||+
T Consensus 333 ctf~~~qKalgKddFt~ip~GvnGvedrMsviwekgv~~G~md~~~fVavtstnaAki 390 (522)
T KOG2584|consen 333 CTFTTEQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMDENRFVAVTSTNAAKI 390 (522)
T ss_pred CCCCHHHHhhccCccccCCCccccccccceeeeehhcccCccCcccEEEEecccchhh
Confidence 9999999999999999999999999999999999999999999999999999999986
No 4
>PLN02795 allantoinase
Probab=100.00 E-value=1.8e-56 Score=448.24 Aligned_cols=372 Identities=23% Similarity=0.294 Sum_probs=306.0
Q ss_pred CCccCCCCccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCC---CCceEEeCCCCEEeccccccccccccCcCCC
Q 014320 45 PQCGIQSSSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVG---DDVKVLDATGKFVMPGGIDPHTHLAMEFMGS 121 (427)
Q Consensus 45 ~~~~~~~~~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~---~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~ 121 (427)
..|...++.+++|+|++|++++....++|+|+||+|++|++....+ ++.++||++|++|+|||||+|+|+..+ +.
T Consensus 36 ~~~~~~~~~~~vi~~~~vv~~~~~~~~~v~i~dG~I~~I~~~~~~~~~~~~~~~ida~G~~v~PG~ID~H~H~~~~--~~ 113 (505)
T PLN02795 36 DRCSLLPWPHFVLYSKRVVTPAGVIPGAVEVEGGRIVSVTKEEEAPKSQKKPHVLDYGNAVVMPGLIDVHVHLNEP--GR 113 (505)
T ss_pred cccccccccceEEECCEEEECCCeEEEEEEEECCEEEEecCccccccccCCCEEEECCCCEEecCEEecccCcCCC--Cc
Confidence 4444444579999999999987777799999999999998754321 246899999999999999999999876 55
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcC-CCC-CcHHHHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHHHHcCCC
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVI-PIN-GSLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGIN 198 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~-~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 198 (427)
..++++.+++++++.+||||++||.. ..+ ....+.++...+.. ....++++++.+.........+++.++. +.|+.
T Consensus 114 ~~~e~~~~~~~aa~~gGvTtv~dmp~~~~P~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~~l~~~~-~~G~~ 192 (505)
T PLN02795 114 TEWEGFPTGTKAAAAGGITTLVDMPLNSFPSTTSVETLELKIEAAKGKLYVDVGFWGGLVPENAHNASVLEELL-DAGAL 192 (505)
T ss_pred cchhHHHHHHHHHHcCCcEEEECCCCCCCCCCChHHHHHHHHHHhccCceeeeeceecccCcchhHHHHHHHHH-HCCCc
Confidence 57889999999999999999999972 222 24555565555544 3466777766544332334455666665 67888
Q ss_pred eEEEEEecCCCc---cCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHH
Q 014320 199 SFKFFMAYKGSF---MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRA 275 (427)
Q Consensus 199 ~ik~~~~~~~~~---~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~ 275 (427)
++|+|+.+++.. ..+++.+.++++.++++|+++++|+|+.+.+.... ....|...+..|...||..+|..++.+.
T Consensus 193 g~k~f~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~iH~E~~~l~~~~~--~~~~~~~~~~~~~~~rP~~aE~~ai~~~ 270 (505)
T PLN02795 193 GLKSFMCPSGINDFPMTTATHIKAALPVLAKYGRPLLVHAEVVSPVESDS--RLDADPRSYSTYLKSRPPSWEQEAIRQL 270 (505)
T ss_pred EEEEEecccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecCChhHhhhhh--hhhcCCcChhHhcccCCHHHHHHHHHHH
Confidence 999998775543 56889999999999999999999999987653221 1133444556678889999999999999
Q ss_pred HHHHHhc-------CCCEEEEcCCCH-HHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcc
Q 014320 276 IRLAEFV-------NTPLYVVHVMSM-DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASG 347 (427)
Q Consensus 276 ~~~~~~~-------g~~~~i~H~~~~-~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~ 347 (427)
+.+++.. ++++|++|+++. ++++.++++|++|++|++++|||||+++++.+.. .+..+|++||||++.
T Consensus 271 ~~la~~~~~~~~~~g~~lhi~HiSt~~~~~e~i~~ak~~G~~Vt~Ev~ph~L~l~~~~~~~----~~~~~k~~PPLR~~~ 346 (505)
T PLN02795 271 LEVAKDTRPGGVAEGAHVHIVHLSDAESSLELIKEAKAKGDSVTVETCPHYLAFSAEEIPD----GDTRYKCAPPIRDAA 346 (505)
T ss_pred HHHHHHhhhcccCCCCCEEEEECCChHHHHHHHHHHHHCCCcEEEEeChhhhcccHHHccC----CCCceEEcCCCCChH
Confidence 9999999 999999999999 9999999999999999999999999999888742 247899999999999
Q ss_pred cHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 348 HNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 348 ~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
|+++||+++++|.+++|+|||+||+.++|.....+|+.+++|++|+|+.+|++|+.++ +++++++++++++|.|||++
T Consensus 347 d~~aL~~al~~G~Id~i~sDHap~~~~~K~~~~~~~~~a~~G~~gle~~l~~~~~~~~-~~~l~l~~~v~~~s~~pA~~ 424 (505)
T PLN02795 347 NRELLWKALLDGDIDMLSSDHSPSPPDLKLLEEGNFLRAWGGISSLQFVLPATWTAGR-AYGLTLEQLARWWSERPAKL 424 (505)
T ss_pred HHHHHHHHHhCCCceEEecCCCCCChHHhccCcCCHhhCCCCceeHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988875556799999999999999999997665 55699999999999999986
No 5
>PRK07369 dihydroorotase; Provisional
Probab=100.00 E-value=3.4e-57 Score=443.70 Aligned_cols=356 Identities=24% Similarity=0.321 Sum_probs=300.9
Q ss_pred ccEEEECcEEEcCCC--ceeeeEEEeCCeEEEeeCCCCC-CCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHH
Q 014320 53 SKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINV-GDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFS 129 (427)
Q Consensus 53 ~~~~i~~~~i~~~~~--~~~~~i~i~~g~I~~vg~~~~~-~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~ 129 (427)
.+++|+|++|+++.+ ...++|+|+||+|++|++.... +.+.++||++|++|+|||||+|+|+..+ +..+++++.+
T Consensus 2 ~~~~i~n~~v~d~~~~~~~~~~v~I~dg~I~~i~~~~~~~~~~~~~iDa~G~~vlPG~ID~H~H~~~~--~~~~~e~~~s 79 (418)
T PRK07369 2 SNELLQQVRVLDPVSNTDRIADVLIEDGKIQAIEPHIDPIPPDTQIIDASGLILGPGLVDLYSHSGEP--GFEERETLAS 79 (418)
T ss_pred CCEEEeCeEEECCCCCcccceeEEEECCEEEEecCCcccCCCCCEEEECCCCEEecCEEecccccCCC--CcCCCccHHH
Confidence 568999999998553 3578999999999999875431 3457899999999999999999999887 7778899999
Q ss_pred HHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhc-cccceeceeccccCCC-hhhHHHHHHHHHHcCCCeEEEEEec
Q 014320 130 GQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWD-EVVSDEMEVMVKEKGINSFKFFMAY 206 (427)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~g~~~ik~~~~~ 206 (427)
++++++++||||++||.+..+. ...+.++..++... .+.+++.+++...... ...++++.++. +.|+.+||.
T Consensus 80 ~~~aa~~GGvTtv~~~pn~~P~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~~ei~~l~-~~Gv~~f~~---- 154 (418)
T PRK07369 80 LAAAAAAGGFTRVAILPDTFPPLDNPATLARLQQQAQQIPPVQLHFWGALTLGGQGKQLTELAELA-AAGVVGFTD---- 154 (418)
T ss_pred HHHHHHhCCceEEEECCCCCCCCCCHHHHHHHHHHhcccCceeEEEEEEEeeCCCCccHhhHHHHH-HCCCEEEEC----
Confidence 9999999999999999754333 45566666665553 4678888877665432 24567777776 678888762
Q ss_pred CCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCE
Q 014320 207 KGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPL 286 (427)
Q Consensus 207 ~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~ 286 (427)
+....+...+.++++.+++.|.++.+|+|+.+.+. ..+...|...++.|...+|..+|..++.+++.+++.+++++
T Consensus 155 -~~~~~~~~~l~~~~~~~~~~~~~v~~H~Ed~~l~~---~~~~~~g~~~~~~~~~~~p~~aE~~av~r~~~la~~~~~~~ 230 (418)
T PRK07369 155 -GQPLENLALLRRLLEYLKPLGKPVALWPCDRSLAG---NGVMREGLLALRLGLPGDPASAETTALAALLELVAAIGTPV 230 (418)
T ss_pred -CCcCCCHHHHHHHHHHHHhcCCeEEEecCChhhhh---cCcccCChhHHHhCCCCCCHHHHHHHHHHHHHHHHHHCCcE
Confidence 12234677888999999999999999999987653 22345566667777788999999999999999999999999
Q ss_pred EEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEec
Q 014320 287 YVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGT 366 (427)
Q Consensus 287 ~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgS 366 (427)
|++|+++.++++.++++|++|++|++|+|||||+++++.+.. .+.++|++||||++.|+++||+++++|.+++|+|
T Consensus 231 hi~HvSs~~~~~~i~~ak~~g~~vt~Ev~phhL~l~~~~~~~----~~~~~kv~PPLR~~~d~~aL~~~l~~G~Id~i~S 306 (418)
T PRK07369 231 HLMRISTARSVELIAQAKARGLPITASTTWMHLLLDTEALAS----YDPNLRLDPPLGNPSDRQALIEGVRTGVIDAIAI 306 (418)
T ss_pred EEEeCCCHHHHHHHHHHHHcCCCeEEEecHHHHhccHHHHhc----cCCCcEECCCCCCHHHHHHHHHHHhcCCCCEEEc
Confidence 999999999999999999999999999999999999988742 1367899999999999999999999999999999
Q ss_pred CCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 367 DHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 367 D~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
||+||+.++|. .+|+.+++|++|+++.+|++++.++++++++++++++++|.||||+
T Consensus 307 DHaP~~~~~K~---~~~~~~~~G~~G~e~~l~~~~~~~v~~~~i~l~~~v~~~s~nPA~~ 363 (418)
T PRK07369 307 DHAPYTYEEKT---VAFAEAPPGAIGLELALPLLWQNLVETGELSALQLWQALSTNPARC 363 (418)
T ss_pred CCCCCCHHHcc---CCHhHCCCCceeHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhHHHH
Confidence 99999998885 3899999999999999999998888889999999999999999985
No 6
>PRK13404 dihydropyrimidinase; Provisional
Probab=100.00 E-value=3.5e-56 Score=444.57 Aligned_cols=370 Identities=36% Similarity=0.601 Sum_probs=312.5
Q ss_pred CccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCc-CCCCChhhHHHH
Q 014320 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEF-MGSETIDDFFSG 130 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~-~g~~~~e~~~~~ 130 (427)
+.+++|+|++|+++.+...++|+|+||+|++|++.. +.+.++||++|++|+|||||+|+|+.++. .+....+++.++
T Consensus 3 ~~d~~i~~~~v~~~~~~~~~~i~I~dg~I~~i~~~~--~~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~e~~~~~ 80 (477)
T PRK13404 3 AFDLVIRGGTVVTATDTFQADIGIRGGRIAALGEGL--GPGAREIDATGRLVLPGGVDSHCHIDQPSGDGIMMADDFYTG 80 (477)
T ss_pred CCcEEEECCEEEcCCCceEEEEEEECCEEEEecCCC--CCCCeEEECCCCEEecCEEEeEEcCCccccCCccccchHHHH
Confidence 457899999999987666789999999999998643 34568999999999999999999997651 134467899999
Q ss_pred HHHHHcCCceEEecCcCCCC-CcHHHHHHHHHHHh-ccccceeceeccccCCChhhH-HHHHHHHHHcCCCeEEEEEecC
Q 014320 131 QAAALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVS-DEMEVMVKEKGINSFKFFMAYK 207 (427)
Q Consensus 131 ~~~~l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~g~~~ik~~~~~~ 207 (427)
+++++.+||||++|+..... ....+.++...... ....++++++.......++.. ++++++. +.|+.+||+|+++.
T Consensus 81 s~aa~~gGvTtv~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~~~v~~l~-~~G~~~iKi~~~~~ 159 (477)
T PRK13404 81 TVSAAFGGTTTVIPFAAQHRGQSLREAVEDYHRRAAGKAVIDYAFHLIVADPTEEVLTEELPALI-AQGYTSFKVFMTYD 159 (477)
T ss_pred HHHHHcCCccEEEEccCCCCCCCHHHHHHHHHHHhccCcEEEEEEEEEecCCChhhHHHHHHHHH-HcCCCEEEEEecCC
Confidence 99999999999999864322 25556666665544 346778877765544333333 5677777 78999999998654
Q ss_pred CCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEE
Q 014320 208 GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (427)
Q Consensus 208 ~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~ 287 (427)
+ +.+++++++++++.|+++|.++.+|+|+.+.+....+.+.+.|..+++.|...||..+|..++.+.+.+++++|+++|
T Consensus 160 ~-~~~~~~~l~~~~~~a~~~g~~V~~Hae~~~~i~~~~~~~~~~G~~~~~~~~~~rp~~~E~~~v~~~~~la~~~g~~~h 238 (477)
T PRK13404 160 D-LKLDDRQILDVLAVARRHGAMVMVHAENHDMIAWLTKRLLAAGLTAPKYHAISRPMLAEREATHRAIALAELVDVPIL 238 (477)
T ss_pred C-CCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHCCCcchhhccccCCHHHHHHHHHHHHHHHHHhCCCEE
Confidence 3 557889999999999999999999999998887666788889999999999999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecC
Q 014320 288 VVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTD 367 (427)
Q Consensus 288 i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD 367 (427)
++|+++..+++.++++|+.|+.+++++|||||+++++.+...+. .|..++++||+|++.++++||+++.+|.+++|+||
T Consensus 239 i~Hvs~~~~~~~i~~~k~~g~~vt~e~~ph~L~l~~~~~~~~~~-~g~~~k~~Pplr~~~d~~aL~~~l~~G~id~i~sD 317 (477)
T PRK13404 239 IVHVSGREAAEQIRRARGRGLKIFAETCPQYLFLTAEDLDRPGM-EGAKYICSPPPRDKANQEAIWNGLADGTFEVFSSD 317 (477)
T ss_pred EEECCCHHHHHHHHHHHHCCCeEEEEEChhhhccCHHHhcCccc-cCCceEECCCCCChHHHHHHHHHHhCCCceEEecC
Confidence 99999999999999999999999999999999999988743111 24789999999999999999999999999999999
Q ss_pred CCCCChhhhh----cC-CCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 368 HCAFNSTQKA----FG-IDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 368 ~~p~~~~~~~----~~-~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
|+||+.++|. .+ ..+|+.+++|++|+|+.+|++++.++..+.++++++++++|.||||+
T Consensus 318 Hap~~~~eK~~~~~~~~~~~~~~~~~G~~gie~~l~~ll~~~v~~~~ls~~~~~~~~t~~pA~~ 381 (477)
T PRK13404 318 HAPFRFDDTDGKLAAGANPSFKAIANGIPGIETRLPLLFSEGVVKGRISLNRFVALTSTNPAKL 381 (477)
T ss_pred CCCCCcccchhhhhccCCCCHhhCCCCcccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 9999976551 11 23799999999999999999998778788899999999999999985
No 7
>PRK08323 phenylhydantoinase; Validated
Probab=100.00 E-value=4.2e-54 Score=431.56 Aligned_cols=368 Identities=52% Similarity=0.818 Sum_probs=316.3
Q ss_pred cEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHHHH
Q 014320 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAA 133 (427)
Q Consensus 54 ~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~ 133 (427)
+++|+|++|++++...+++|+|+||||++|++. .+.++||++|++|+|||||+|+|+..+..+..++++++.+++.
T Consensus 2 d~li~n~~v~~~~~~~~~~v~I~~g~I~~i~~~----~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~e~~~~~~~~ 77 (459)
T PRK08323 2 STLIKNGTVVTADDTYKADVLIEDGKIAAIGAN----LGDEVIDATGKYVMPGGIDPHTHMEMPFGGTVSSDDFETGTRA 77 (459)
T ss_pred cEEEECCEEEcCCCceEEEEEEECCEEEEEecC----CCceEEECCCCEEeccEEeeeeccccccCCccccCcHHHHHHH
Confidence 579999999998777789999999999999874 2468999999999999999999998764444578889999999
Q ss_pred HHcCCceEEecCcCCCCC-cHHHHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecCCCcc
Q 014320 134 ALAGGTTMHIDFVIPING-SLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFM 211 (427)
Q Consensus 134 ~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~ 211 (427)
++++||||++|+....+. ...+.++...... ....++++++........+.++++++++ +.|+..+|+++++++.+.
T Consensus 78 a~~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~~g~~~ik~~~~~~~~~~ 156 (459)
T PRK08323 78 AACGGTTTIIDFALQPKGQSLREALEAWHGKAAGKAVIDYGFHMIITDWNEVVLDEMPELV-EEGITSFKLFMAYKGALM 156 (459)
T ss_pred HHhCCCCEEEeCcCCCCCCChHHHHHHHHHHhccCceEEEEEEEEecCCcHHHHHHHHHHH-HcCCCEEEEEEecCCCCC
Confidence 999999999998754432 4555666555543 2356777666443334455577788877 688899999998887788
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcC
Q 014320 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (427)
Q Consensus 212 ~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~ 291 (427)
+++++++++++.|+++|.++++|+|+.+.+....+.+.+.|...++.|...+|..+|..++.+.+++++..++++|++|+
T Consensus 157 ~s~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~~a~~~~~~~~i~H~ 236 (459)
T PRK08323 157 LDDDELLRALQRAAELGALPMVHAENGDAIAYLQAKLLAEGKTGPEYHALSRPPEVEGEATNRAIMLAELAGAPLYIVHV 236 (459)
T ss_pred CCHHHHHHHHHHHHhcCCEEEEEcCChHHHHHHHHHHHHcCCCChhhhhccCCHHHHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 89999999999999999999999999888887777888889999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCC
Q 014320 292 MSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF 371 (427)
Q Consensus 292 ~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~ 371 (427)
++.++++.++.+|+.|++|++++||||++++.+.+...++..|..++++||+|++.++++||+++++|++++|||||+|+
T Consensus 237 s~~~~~~~i~~ak~~g~~vt~e~~p~~l~l~~~~~~~~~~~~g~~~k~~pPlr~~~~~~~l~~~l~~G~i~~i~sDh~p~ 316 (459)
T PRK08323 237 SCKEALEAIRRARARGQRVFGETCPQYLLLDESEYDGPDWFEGAKYVMSPPLRDKEHQDALWRGLQDGDLQVVATDHCPF 316 (459)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEcCccceeecHHHhcCCccccccceEECCCCCChHHHHHHHHHhhcCCeeEEECCCCCC
Confidence 99999999999999999999999999999998876432211246889999999999999999999999999999999999
Q ss_pred Chhhhh-cCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 372 NSTQKA-FGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 372 ~~~~~~-~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+..+|. .+.++|+.+|+|++|.++++|++++..+.++.++++++++++|.|||++
T Consensus 317 ~~~~~~~~~~~~~~~~p~G~~~~e~~~~~l~~~~~~~~~~~~~~~~~~~t~~pA~~ 372 (459)
T PRK08323 317 CFEQKKQLGRGDFTKIPNGTPGVEDRMPLLFSEGVMTGRITLNRFVELTSTNPAKI 372 (459)
T ss_pred ChHHhcccccCCHhhCCCCcchHhhhHHHHHHHHHHcCCCCHHHHHHHHhhHHHHH
Confidence 987775 2456899999999999999999997777788899999999999999985
No 8
>PRK07627 dihydroorotase; Provisional
Probab=100.00 E-value=4.5e-55 Score=430.07 Aligned_cols=355 Identities=21% Similarity=0.224 Sum_probs=287.0
Q ss_pred cEEEECcEEEcCCCc--eeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHH
Q 014320 54 KILIKGGTVVNAHHQ--QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQ 131 (427)
Q Consensus 54 ~~~i~~~~i~~~~~~--~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~ 131 (427)
+++|+|++|+++.+. ..++|+|+||||++|++......+.++||++|++|+|||||+|+|+..+ +....+++.+++
T Consensus 2 ~~~i~~~~v~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~~~~~~iDa~g~~vlPG~iD~H~H~~~~--g~~~~e~~~t~s 79 (425)
T PRK07627 2 KIHIKGGRLIDPAAGTDRQADLYVAAGKIAAIGQAPAGFNADKTIDASGLIVCPGLVDLSARLREP--GYEYKATLESEM 79 (425)
T ss_pred eEEEEeeEEECCCCCccceeEEEEECCEEEEecCCCcCCCCCeEEECCCCEEeccEEeccccccCC--CccccCcHHHHH
Confidence 589999999986553 5789999999999998753223457899999999999999999999887 667789999999
Q ss_pred HHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhc-cccceeceecccc-CCChhhHHHHHHHHHHcCCCeEEEEEecCC
Q 014320 132 AAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAIT-KWDEVVSDEMEVMVKEKGINSFKFFMAYKG 208 (427)
Q Consensus 132 ~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~ 208 (427)
++++.+||||++++....+. ...+.++....... ....++..++... ....+.+.++.++. +.|+.+||.+ +
T Consensus 80 ~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~l~-~~G~~~fk~~----~ 154 (425)
T PRK07627 80 AAAVAGGVTSLVCPPDTDPVLDEPGLVEMLKFRARNLNQAHVYPLGALTVGLKGEVLTEMVELT-EAGCVGFSQA----N 154 (425)
T ss_pred HHHHhCCeeEEEeCCCCCCCCCCHHHHHHHHHHhhccCceeEEEeCeEEcCCCccCHHHHHHHH-hCCEEEEEcC----C
Confidence 99999999999998654332 33333444333322 2344433333222 22345567788877 6788888853 2
Q ss_pred CccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEE
Q 014320 209 SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYV 288 (427)
Q Consensus 209 ~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i 288 (427)
.+..+...+.+.++.+++.|.++.+|+|+...... .....|....+.+...+|..+|..++.+++.+++.+++++||
T Consensus 155 ~~~~~~~~l~~~~~~~~~~~~~v~~H~E~~~~~~~---~~~~~g~~~~~~~~~~~P~~aE~~av~r~~~la~~~~~~~hi 231 (425)
T PRK07627 155 VPVVDTQVLLRALQYASTFGFTVWLRPLDAFLGRG---GVAASGAVASRLGLSGVPVAAETIALHTIFELMRVTGARVHL 231 (425)
T ss_pred cccCCHHHHHHHHHHHHhcCCEEEEecCChhhhhC---CCcCCCHhHHHcCCCCCCHHHHHHHHHHHHHHHHHHCCcEEE
Confidence 23467888999999999999999999998754321 122234344556677899999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCC
Q 014320 289 VHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDH 368 (427)
Q Consensus 289 ~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~ 368 (427)
+|+++.++++.++++|++|++|++|+|||||+|+++.+.+ .+..+|++||||++.++++||+++++|++++++|||
T Consensus 232 ~HvSs~~~~~~i~~ak~~g~~vt~Ev~ph~L~l~~~~~~~----~~~~~k~~PPLR~~~d~~~L~~~l~~G~id~i~SDH 307 (425)
T PRK07627 232 ARLSSAAGVALVRAAKAEGLPVTCDVGVNHVHLIDVDIGY----FDSQFRLDPPLRSQRDREAIRAALADGTIDAICSDH 307 (425)
T ss_pred EeCCCHHHHHHHHHHHHCCCCeEEEeccchheEeHhHHhc----cCCceEEeCCCCCHHHHHHHHHHHhcCCCcEEEcCC
Confidence 9999999999999999999999999999999999887742 236899999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 369 CAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 369 ~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+||+.++|. .+|+.+++|++|+|+.+|+++. .+.+++++++++++++|.|||++
T Consensus 308 aP~~~~~k~---~~~~~~~~G~~g~e~~~pl~~~-~~~~~~i~~~~~l~~~t~~pA~~ 361 (425)
T PRK07627 308 TPVDDDEKL---LPFAEATPGATGLELLLPLTLK-WADEAKVPLARALARITSAPARV 361 (425)
T ss_pred CCCCHHHcc---CCHhhCCCCceeHHHHHHHHHH-HHHhCCCCHHHHHHHHHHHHHHH
Confidence 999987775 3899999999999999999985 45567899999999999999974
No 9
>cd01314 D-HYD D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin. The hydrolysis of dihydropyrimidines is the second step of reductive catabolism of pyrimidines in human. The hydrolysis of 5-substituted hydantoins in microorganisms leads to enantiomerically pure N-carbamyl amino acids, which are used for the production of antibiotics, peptide hormones, pyrethroids, and pesticides. HYDs are classified depending on their stereoselectivity. This family also includes collapsin response regulators (CRMPs), cytosolic proteins involved in neuronal differentiation and axonal guidance which have strong homology to DHPases, but lack most of the active site residues.
Probab=100.00 E-value=5.4e-54 Score=429.18 Aligned_cols=370 Identities=54% Similarity=0.861 Sum_probs=315.1
Q ss_pred EEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHHHHH
Q 014320 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAA 134 (427)
Q Consensus 55 ~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~~ 134 (427)
++|+|++|++++...+++|+|+||||++|++....+.+.++||++|++|+|||||+|+|+.++.....++++++.+++++
T Consensus 1 lli~~~~v~~~~~~~~~~i~I~~g~I~~ig~~~~~~~~~~viD~~g~~vlPGlID~H~H~~~~~~~~~~~e~~~~~~~~a 80 (447)
T cd01314 1 LIIKNGTIVTADGSFKADILIEDGKIVAIGPNLEAPGGVEVIDATGKYVLPGGIDPHTHLELPFMGTVTADDFESGTRAA 80 (447)
T ss_pred CEEECCEEECCCCceeeeEEEECCEEEEeeCCCCCCCCceEEECCCCEEecCEEeccccccccccCccCcchHHHHHHHH
Confidence 37999999998777789999999999999875433334689999999999999999999987633346788999999999
Q ss_pred HcCCceEEecCcCCCC-CcHHHHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecCCCccC
Q 014320 135 LAGGTTMHIDFVIPIN-GSLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMI 212 (427)
Q Consensus 135 l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~ 212 (427)
+.+||||++|+..+.+ ....+.++...... .+..++++++.......++.++++.++. +.|+..+|+++++++.+.+
T Consensus 81 ~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~-~~g~~~ik~~~~~~~~~~~ 159 (447)
T cd01314 81 AAGGTTTIIDFAIPNKGQSLLEAVEKWRGKADGKSVIDYGFHMIITDWTDSVIEELPELV-KKGISSFKVFMAYKGLLMV 159 (447)
T ss_pred HhCCCcEEEeCCCCCCCCCHHHHHHHHHHHhcCCCcccEEEEEeecCCChHHHHHHHHHH-HcCCCEEEEEeccCCCCCC
Confidence 9999999999975433 24555565554433 3356666665444333445567777777 4788899999998888888
Q ss_pred CHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 213 NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 213 ~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
+++.++++++.|+++|+++++|+|+...+....+++...|....+.|...+|...|..++.+.+.+++..++++|++|++
T Consensus 160 s~~~l~~~~~~a~~~g~~v~~H~E~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~~~~~~~~H~s 239 (447)
T cd01314 160 DDEELLDVLKRAKELGALVMVHAENGDVIAELQKKLLAQGKTGPEYHALSRPPEVEAEATARAIRLAELAGAPLYIVHVS 239 (447)
T ss_pred CHHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHHHcCCCChHHhhhcCCHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 99999999999999999999999998888877777778899888889999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCC
Q 014320 293 SMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFN 372 (427)
Q Consensus 293 ~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~ 372 (427)
+.++++.++.+|++|+++++++||||++++++.+...+ ..|..++++||+|++.++++||+++++|++++|||||+|++
T Consensus 240 ~~~~~~~i~~~k~~g~~v~~~~~ph~l~~~~~~~~~~~-~~g~~~~~~pplr~~~~~~~l~~~l~~G~i~~igsDh~~~~ 318 (447)
T cd01314 240 SKEAADEIARARKKGLPVYGETCPQYLLLDDSDYWKDW-FEGAKYVCSPPLRPKEDQEALWDGLSSGTLQTVGSDHCPFN 318 (447)
T ss_pred CHHHHHHHHHHHHCCCeEEEecCchhheeCHHHhcccc-ccccceEECCCCCChHHHHHHHHHHhCCCeeEEECCCCCCC
Confidence 99999999999999999999999999999988763211 12467899999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 373 STQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 373 ~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
...|....++|+.+++|++|+|+++|++|++++..+.++++++++++|.||||+
T Consensus 319 ~~~k~~~~~~~~~~~~G~~g~e~~l~~l~~~~~~~~~~~~~~~~~~~t~~pA~~ 372 (447)
T cd01314 319 FAQKARGKDDFTKIPNGVPGVETRMPLLWSEGVAKGRITLEKFVELTSTNPAKI 372 (447)
T ss_pred HHHhhcccCCHhhCCCCCchHhhhHHHHHHHHHHcCCCCHHHHHHHHhhHHHHH
Confidence 988875445899999999999999999998888788899999999999999985
No 10
>TIGR02033 D-hydantoinase D-hydantoinase. This model represents the D-hydantoinase (dihydropyrimidinase) which primarily converts 5,6-dihydrouracil to 3-ureidopropanoate but also acts on dihydrothymine and hydantoin. The enzyme is a metalloenzyme.
Probab=100.00 E-value=8.8e-54 Score=429.01 Aligned_cols=371 Identities=54% Similarity=0.819 Sum_probs=312.1
Q ss_pred EEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHHHHH
Q 014320 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAA 134 (427)
Q Consensus 55 ~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~~ 134 (427)
++|+|++|++++...+++|+|+||||++|++....+.+.++||++|++|+|||||+|+|+..+..+..++++++.+++++
T Consensus 1 ~li~n~~vv~~~~~~~~~V~I~dg~I~~Ig~~~~~~~~~~vIDa~G~~vlPGlID~H~H~~~~~~~~~~~e~~~~~s~~a 80 (454)
T TIGR02033 1 KLIRGGTVVNADDVFQADVLIEGGKIVAVGRNLSPPDAVEEIDATGKYVMPGGIDVHTHLEMPFGGTVTADDFFTGTKAA 80 (454)
T ss_pred CEEECcEEEcCCCceEEEEEEECCEEEEecCCCCCCCCCcEEECCCCEEecCEecceeccCcccCCCCCcchHHHHHHHH
Confidence 37999999998777789999999999999975433334589999999999999999999987644456789999999999
Q ss_pred HcCCceEEecCcCCCCC-cHHHHHHHHHHHhc-cccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecCCCccC
Q 014320 135 LAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMI 212 (427)
Q Consensus 135 l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~ 212 (427)
+++||||++|+....+. ...+.++...+... +..++++++........+..++..+...+.|+..+|+++++++.+.+
T Consensus 81 ~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~~~~~ 160 (454)
T TIGR02033 81 AAGGTTTIIDFALPHKGESLTEALETWHEKAEGKSVIDYGFHMMITHWNDEVLEEHIPELVEEGITSFKVFMAYKNLLMV 160 (454)
T ss_pred HhCCCCEEEeCcCCCCCCCHHHHHHHHHHHhccCceEEEEEEecccCCcHHHHHHHHHHHHhcCCcEEEEEeecCCCCCC
Confidence 99999999998755432 45566666555443 35666666544333334444453333336788999999998878889
Q ss_pred CHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 213 NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 213 ~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
++++++++++.|+++|+++++|+|+........+++.+.|......|...+|..+|..++.+.+.+++..++++|++|++
T Consensus 161 ~~~~l~~~~~~a~~~~~~v~~H~E~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~e~~~v~~~~~~~~~~~~~~~i~H~s 240 (454)
T TIGR02033 161 DDEELFEILKRAKELGALLQVHAENGDVIAELQARLLAQGKTGPEYHALSRPPESEAEAVARAIALAALANAPLYVVHVS 240 (454)
T ss_pred CHHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHHHHHcCCCChhHhhhcCCHHHHHHHHHHHHHHHHHhCCCEEEEECC
Confidence 99999999999999999999999998887777788888899999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCC
Q 014320 293 SMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFN 372 (427)
Q Consensus 293 ~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~ 372 (427)
+..+++.++.+|+.|++|++++||||++++.+.+..++.+. ..++++||+|++.++++||+++++|+++++||||+|++
T Consensus 241 ~~~~~~~i~~~~~~g~~vt~e~~p~~l~~~~~~~~~~~~~~-~~~~~~pPlr~~~~~~~l~~~l~~G~i~~igtDh~p~~ 319 (454)
T TIGR02033 241 TASAVDEIAEAREKGQPVYGETCPQYLLLDDTIYDKPGFEG-AKYVCSPPLREKEDQDALWSALSSGALQTVGSDHCPFN 319 (454)
T ss_pred CHHHHHHHHHHHHCCCeEEEEcCchheeecHHHhcCccccc-ceeEECCCCCChhhHHHHHHHhhcCCeEEEECCCCCCC
Confidence 99889999999999999999999999999988875323222 57899999999999999999999999999999999999
Q ss_pred hhhh-hcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 373 STQK-AFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 373 ~~~~-~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
...| ....++|+.+++|++|+|+.++++|+.++.++.++++++++++|.|||++
T Consensus 320 ~~~k~~~~~~~~~~~~~G~~g~e~~l~~l~~~~v~~~~~~~~~~~~~~t~~pa~~ 374 (454)
T TIGR02033 320 FAQKKAIGKDDFTKIPNGGPGVEERMTLLFDEGVATGRITLEKFVELTSTNPAKI 374 (454)
T ss_pred HHHhhhcccCCHhhCCCCCchHHhHHHHHHHHHHHcCCCCHHHHHHHHhhHHHHH
Confidence 8776 22235799999999999999999998888888899999999999999985
No 11
>PRK09059 dihydroorotase; Validated
Probab=100.00 E-value=2.3e-54 Score=425.54 Aligned_cols=358 Identities=19% Similarity=0.269 Sum_probs=293.7
Q ss_pred CCccEEEECcEEEcCCCc--eeeeEEEeCCeEEEeeCCCC---CCCCceEEeCCCCEEeccccccccccccCcCCCCChh
Q 014320 51 SSSKILIKGGTVVNAHHQ--QIADVYVEDGIVVAVQPNIN---VGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETID 125 (427)
Q Consensus 51 ~~~~~~i~~~~i~~~~~~--~~~~i~i~~g~I~~vg~~~~---~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e 125 (427)
|+.+++|+|++|+++.+. .+++|+|+||||++|++... .+.+.++||++|++|+|||||+|+|+..+ +..+.+
T Consensus 1 ~~~~~~i~n~~v~~~~~~~~~~~~v~I~~G~I~~i~~~~~~~~~~~~~~viDa~G~~v~PG~ID~HvH~~~~--~~~~~e 78 (429)
T PRK09059 1 MMRPILLANARIIDPSRGLDEIGTVLIEDGVIVAAGKGAGNQGAPEGAEIVDCAGKAVAPGLVDARVFVGEP--GAEHRE 78 (429)
T ss_pred CCcCEEEEeeEEECCCCCcccceEEEEECCEEEEecCccccccCCCCCeEEECCCCEEeccEEecccccCCC--Cchhhh
Confidence 467899999999997763 46899999999999987432 23456899999999999999999999876 556788
Q ss_pred hHHHHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhcc-ccceeceeccccCC-ChhhHHHHHHHHHHcCCCeEEE
Q 014320 126 DFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKN-SCMDYGFHMAITKW-DEVVSDEMEVMVKEKGINSFKF 202 (427)
Q Consensus 126 ~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~g~~~ik~ 202 (427)
++.+.+++++.+||||++++....+. ...+.++.+.+...+ +.+++.+++....+ .++.+.++.++. ..|+..++.
T Consensus 79 ~~~~~s~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~l~e~~~l~-~~Gv~~f~~ 157 (429)
T PRK09059 79 TIASASRAAAAGGVTSIIMMPDTDPVIDDVALVEFVKRTARDTAIVNIHPAAAITKGLAGEEMTEFGLLR-AAGAVAFTD 157 (429)
T ss_pred hHHHHHHHHHhCCcEEEEeccCCCCCCCCHHHHHHHHHHhcccCcccEEEEeEEecCCCCcchHHHHHHH-hcCcEEEec
Confidence 89999999999999999999754332 445666666655543 57888877665443 344566777776 677766652
Q ss_pred EEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhc
Q 014320 203 FMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFV 282 (427)
Q Consensus 203 ~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~ 282 (427)
. +.+..+...+.++++.+++.|+++.+|+|+.+.+.. .....|......|...||..+|..++.+++.+++.+
T Consensus 158 ---~-~~~~~~~~~l~~~~~~~~~~~~~v~~H~E~~~l~~~---~~~~~~~~~~~~~~~~rP~~aE~~av~r~~~la~~~ 230 (429)
T PRK09059 158 ---G-RRSVANTQVMRRALTYARDFDAVIVHETRDPDLGGN---GVMNEGLFASWLGLSGIPREAEVIPLERDLRLAALT 230 (429)
T ss_pred ---C-CcccCCHHHHHHHHHHHHhcCCEEEEecCChhhhcC---CCcCCcHHHHHcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 1 122346677889999999999999999999875431 111222223345567899999999999999999999
Q ss_pred CCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCce
Q 014320 283 NTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQ 362 (427)
Q Consensus 283 g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~ 362 (427)
++++|++|+++.++++.++++|+.|++|++++|||||+|+++.+.+ + +..+|++||||++.|+++||+++++|.++
T Consensus 231 ~~~~hi~hvs~~~~~~~i~~ak~~g~~vt~ev~phhL~l~~~~~~~--~--~~~~kvnPPLR~~~d~~~L~~~l~~g~id 306 (429)
T PRK09059 231 RGRYHAAQISCAESAEALRRAKDRGLKVTAGVSINHLSLNENDIGE--Y--RTFFKLSPPLRTEDDRVAMVEAVASGTID 306 (429)
T ss_pred CCcEEEEecCCHHHHHHHHHHHHCCCCEEEeecHHHHhccHHHHhc--c--CCccEEcCCCCCHHHHHHHHHHHHcCCCc
Confidence 9999999999999999999999999999999999999999887742 2 36899999999999999999999999999
Q ss_pred EEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 363 LVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 363 ~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+++|||+||+.++|. .+|+.+++|++|+|+.+|+++ .++.++.++++++++++|.||||+
T Consensus 307 ~i~sDh~p~~~~~K~---~~~~~~~~G~~gle~~l~~~~-~~v~~~~l~l~~~~~~~s~nPA~~ 366 (429)
T PRK09059 307 IIVSSHDPQDVDTKR---LPFSEAAAGAIGLETLLAAAL-RLYHNGEVPLLRLIEALSTRPAEI 366 (429)
T ss_pred EEEeCCCCCCHHHCc---CChhhCCCCcccHHHHHHHHH-HHHHcCCCCHHHHHHHHhHHHHHH
Confidence 999999999988875 389999999999999999999 478888999999999999999985
No 12
>PRK08417 dihydroorotase; Provisional
Probab=100.00 E-value=3.3e-54 Score=420.26 Aligned_cols=327 Identities=19% Similarity=0.262 Sum_probs=273.7
Q ss_pred EEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCC-
Q 014320 73 VYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING- 151 (427)
Q Consensus 73 i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~- 151 (427)
|+|+||||++|++.. .+.++||++|++|+|||||+|+|+..+ +.. .+++.+++++++++||||++||.+..+.
T Consensus 1 i~I~dG~I~~i~~~~---~~~~viDa~g~~vlPG~ID~HvH~~~~--~~~-~e~~~t~s~aA~aGGvTtv~dmpnt~P~~ 74 (386)
T PRK08417 1 IRIKDGKITEIGSDL---KGEEILDAKGKTLLPALVDLNVSLKND--SLS-SKNLKSLENECLKGGVGSIVLYPDSTPAI 74 (386)
T ss_pred CEEECCEEEEecCCC---CCCeEEECCCCEEccCeeEEeeeeCCC--CcC-hhhHHHHHHHHHcCCcEEEEeCCCCCCCC
Confidence 689999999998753 346899999999999999999999876 433 5899999999999999999999754332
Q ss_pred cHHHHHHHHHHHhc---cccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcC
Q 014320 152 SLTAGFEAYEKKAK---NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLG 228 (427)
Q Consensus 152 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g 228 (427)
...+.++...+... ...+++.. ... .++.++++.++. +.|+..||.+. ..+++.+.++++.+++.|
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~i~~l~-~~Gv~~~k~~~------~~~~~~l~~~~~~a~~~g 143 (386)
T PRK08417 75 DNEIALELINSAQRELPMQIFPSIR---ALD-EDGKLSNIATLL-KKGAKALELSS------DLDANLLKVIAQYAKMLD 143 (386)
T ss_pred CCHHHHHHHHHHhhccCCcEEEEEE---EEC-CCccHHHHHHHH-HCCCEEEECCC------CCCHHHHHHHHHHHHHcC
Confidence 33444544444332 22344322 222 334467787776 78988887531 368889999999999999
Q ss_pred CcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCC
Q 014320 229 ALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQ 308 (427)
Q Consensus 229 ~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~ 308 (427)
+++.+|+|+.+.+.. .+...|....+.+...||..+|..++.+++++++++++++|++|+++.++++.++.+|+.|+
T Consensus 144 ~~V~~HaEd~~~~~~---~~~~~g~~~~~~~~~~rp~~aE~~~v~~~~~la~~~~~~lhi~hvS~~~~~~~i~~ak~~g~ 220 (386)
T PRK08417 144 VPIFCRCEDSSFDDS---GVMNDGELSFELGLPGIPSIAETKEVAKMKELAKFYKNKVLFDTLALPRSLELLDKFKSEGE 220 (386)
T ss_pred CEEEEeCCCHHHhhH---HHHhcChhhHHhCCCCCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCC
Confidence 999999999776543 34556777777888889999999999999999999999999999999999999999999999
Q ss_pred CEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCC
Q 014320 309 RVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPN 388 (427)
Q Consensus 309 ~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~ 388 (427)
+|++|+|||||+|+++++.+ + +..+|++||||++.||++||+++++|.+++|+|||+||+.++|. .+|+.+++
T Consensus 221 ~vt~ev~ph~L~l~~~~~~~--~--~~~~k~~PPlR~~~d~~~L~~~l~~g~Id~i~SDHaP~~~~~K~---~~~~~a~~ 293 (386)
T PRK08417 221 KLLKEVSIHHLILDDSACEN--F--NTAAKLNPPLRSKEDRLALLEALKEGKIDFLTSLHSAKSNSKKD---LAFDEAAF 293 (386)
T ss_pred CEEEEechHHHeeCHHHhcC--c--CcccEECCCCCCHHHHHHHHHHHhcCCceEEEcCCCCCCHHHcc---CCHhHCCC
Confidence 99999999999999887732 2 36889999999999999999999999999999999999988875 37999999
Q ss_pred CCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 389 GVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 389 G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
|++|+|+.+|++|+.+++++.++++++++++|.|||++
T Consensus 294 G~~g~e~~~~~~~~~~v~~~~~~~~~~~~~~t~~pA~~ 331 (386)
T PRK08417 294 GIDSICEYFSLCYTYLVKEGIITWSELSRFTSYNPAQF 331 (386)
T ss_pred CchHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 99999999999998888888999999999999999985
No 13
>PRK06189 allantoinase; Provisional
Probab=100.00 E-value=7.4e-53 Score=419.63 Aligned_cols=363 Identities=26% Similarity=0.356 Sum_probs=306.9
Q ss_pred CCccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHH
Q 014320 51 SSSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSG 130 (427)
Q Consensus 51 ~~~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~ 130 (427)
|+.+++|+|++|+++++...++|+|+||+|++|++... .++.++||++|++|+|||||+|+|+..+ +...++++.++
T Consensus 1 ~~~~~~i~~~~v~~~~~~~~~~v~i~~G~I~~i~~~~~-~~~~~~iD~~g~~vlPG~ID~H~H~~~~--~~~~~~~~~~~ 77 (451)
T PRK06189 1 MMYDLIIRGGKVVTPEGVYRADIGIKNGKIAEIAPEIS-SPAREIIDADGLYVFPGMIDVHVHFNEP--GRTHWEGFATG 77 (451)
T ss_pred CCccEEEECCEEEcCCCcEEEEEEEECCEEEEecCCCC-CCCCeEEECCCCEEecCEEEeeeccCCC--CCCCcccHHHH
Confidence 35678999999999887778999999999999987543 2346799999999999999999999876 55678899999
Q ss_pred HHHHHcCCceEEecCc-CC-CCCcHHHHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecC
Q 014320 131 QAAALAGGTTMHIDFV-IP-INGSLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYK 207 (427)
Q Consensus 131 ~~~~l~~GvTtv~d~~-~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~ 207 (427)
+++++++||||+++|. +. +.....+.++...+.. ..+.+++.++..... +..+++.++. +.|+..+|+|++..
T Consensus 78 ~~aa~~gGvTt~~~~p~~t~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~~~~~l~~l~-~~Gv~~~k~f~~~~ 153 (451)
T PRK06189 78 SAALAAGGCTTYFDMPLNSIPPTVTREALDAKAELARQKSAVDFALWGGLVP---GNLEHLRELA-EAGVIGFKAFMSNS 153 (451)
T ss_pred HHHHHhCCEEEEEECCCCCCCCCCcHHHHHHHHHHhCcCceEeEEEEecccc---cCHHHHHHHH-HcCCcEEEEEcccc
Confidence 9999999999999995 22 1223344454444443 346788887644322 2356677776 78999999998653
Q ss_pred C---CccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCC
Q 014320 208 G---SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNT 284 (427)
Q Consensus 208 ~---~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~ 284 (427)
+ ....++..+.++++.+++.|.++.+|+|+++.+....+.+...|..+.+.|+..+|..+|..++.+.+.++++.|+
T Consensus 154 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~e~~~~~~~~~~~~~~~g~~~~~~~~~~~P~~~E~~~v~~~l~la~~~g~ 233 (451)
T PRK06189 154 GTDEFRSSDDLTLYEGMKEIAALGKILALHAESDALTRHLTTQARQQGKTDVRDYLESRPVVAELEAVQRALLYAQETGC 233 (451)
T ss_pred CCCCcCcCCHHHHHHHHHHHHhcCCeEEEECCChHHHHHHHHHHHhcCCCChhHccccCCHHHHHHHHHHHHHHHHHhCC
Confidence 2 2345778899999999999999999999988766665667778888888899999999999999999999999999
Q ss_pred CEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEE
Q 014320 285 PLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLV 364 (427)
Q Consensus 285 ~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~l 364 (427)
++|++|+++.++++.++++++.|+++++|+||||++++++.+.. + +..++++||+|++.++++||+++++|++++|
T Consensus 234 ~~hi~HiSt~~~~~~i~~~k~~g~~vt~ev~ph~L~l~~~~~~~--~--~~~~~~~Pplr~~~~~~~L~~~l~~G~i~~i 309 (451)
T PRK06189 234 PLHFVHISSGKAVALIAEAKKRGVDVSVETCPHYLLFTEEDFER--I--GAVAKCAPPLRSRSQKEELWRGLLAGEIDMI 309 (451)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCcEEEEeCHHHhhcCHhHhhC--c--CCceEEeCCCCChhhHHHHHHHHhCCCceEE
Confidence 99999999999999999999999999999999999999887742 2 3688999999999999999999999999999
Q ss_pred ecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 365 GTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 365 gSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+|||+|++...|. ..+|+.+++|++|+|+.+|++|+.++.+++++++++++++|.||||+
T Consensus 310 ~sDh~p~~~~~K~--~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~~~~~~t~npA~~ 369 (451)
T PRK06189 310 SSDHSPCPPELKE--GDDFFLVWGGISGGQSTLLVMLTEGYIERGIPLETIARLLATNPAKR 369 (451)
T ss_pred ECCCCCCCHHHcC--cCCcccCCCCceeHHHHHHHHHHHHHhcCCCCHHHHHHHHhhhHHHH
Confidence 9999999988774 24899999999999999999998777888899999999999999985
No 14
>PRK08044 allantoinase; Provisional
Probab=100.00 E-value=8.4e-53 Score=417.57 Aligned_cols=360 Identities=27% Similarity=0.376 Sum_probs=308.1
Q ss_pred CccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHH
Q 014320 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQ 131 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~ 131 (427)
+.+++|+|++|++.+....++|+|+||+|++|++... .+.++||+.|++++|||||+|+|+..+ +....+++.+++
T Consensus 2 ~~~~~i~n~~vi~~~~~~~~~i~I~dg~I~~i~~~~~--~~~~~iD~~G~~v~Pg~iD~h~h~~~~--~~~~~e~~~~~~ 77 (449)
T PRK08044 2 SFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLG--DAKEVMDASGLVVSPGMVDAHTHISEP--GRSHWEGYETGT 77 (449)
T ss_pred CceEEEECcEEEcCCCCEEEEEEEECCEEEEecCCCC--CCCeEEECCCCEEcCCeeccccccCCC--CccccccHHHHH
Confidence 4578999999998766667899999999999986432 356899999999999999999999887 555688899999
Q ss_pred HHHHcCCceEEecCcC-CCC-CcHHHHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecCC
Q 014320 132 AAALAGGTTMHIDFVI-PIN-GSLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKG 208 (427)
Q Consensus 132 ~~~l~~GvTtv~d~~~-~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~ 208 (427)
++++++||||++|+.. ..+ ....+.++...+.. .++.+++.++++.... ...++.++. +.|+.+||+|+.+.+
T Consensus 78 ~aa~~gGvTtv~d~~~~~~p~~~~~~~~~~~~~~~~~~s~vd~~~~~~~~~~---~~~ei~~l~-~~gv~~fk~~~~~~~ 153 (449)
T PRK08044 78 RAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSY---NLDRLHELD-EVGVVGFKCFVATCG 153 (449)
T ss_pred HHHHhCCceEEECCccCCCCCCCcHHHHHHHHHHhccCCeeeEEEEeeeCCC---CHHHHHHHH-HcCceEEEEEecccC
Confidence 9999999999999962 212 24556666555554 3577888776655432 356677776 689999999987532
Q ss_pred C-------ccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHh
Q 014320 209 S-------FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEF 281 (427)
Q Consensus 209 ~-------~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~ 281 (427)
. ...++..+.+.++.+++.|.++.+|+|+.+.+....+.+.+.|...++.|+..+|..+|..++.+.+.++++
T Consensus 154 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~H~E~~~l~~~~~~~~~~~G~~~~~~~~~~~P~~~E~~~v~r~~~lA~~ 233 (449)
T PRK08044 154 DRGIDNDFRDVNDWQFYKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKV 233 (449)
T ss_pred cccccCCccCcCHHHHHHHHHHHHhcCCEEEEecCCHHHHHHHHHHHHhcCCCChhhccccCCHHHHHHHHHHHHHHHHH
Confidence 1 234677888999999999999999999998876555667788988999999999999999999999999999
Q ss_pred cCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCc
Q 014320 282 VNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGIL 361 (427)
Q Consensus 282 ~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~ 361 (427)
.|+++|++|+++..+++.++++++.|.++++++|||||+++++.+.. + +..++++||+|++.++++||+++++|++
T Consensus 234 ~g~~vhi~HiSt~~~~~~i~~ak~~G~~it~e~~~h~L~l~~~~~~~--~--~~~~k~~PPlr~~~d~~aL~~~l~~G~i 309 (449)
T PRK08044 234 AGCRLHVCHISSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEE--I--GTLAKCSPPIRDLENQKGMWEKLFNGEI 309 (449)
T ss_pred hCCCEEEEeCCCHHHHHHHHHHHHCCCCEEEEcChhhhcccHHHhhC--C--CCcEEEcCCCCChHHHHHHHHHHhCCCc
Confidence 99999999999999999999999999999999999999999988743 2 4689999999999999999999999999
Q ss_pred eEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 362 QLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 362 ~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
++|+|||+||+.++|. .+|+.++.|++|+++.+|++++.++++++++++++++++|.||||+
T Consensus 310 d~i~sDH~P~~~~~K~---~~~~~~~~g~~g~e~~l~~~~~~~v~~~~l~~~~~v~~~s~npA~~ 371 (449)
T PRK08044 310 DCLVSDHSPCPPEMKA---GNIMEAWGGIAGLQNCMDVMFDEAVQKRGMSLPMFGKLMATNAADI 371 (449)
T ss_pred eEEEcCCCCCChHHcc---CChhhCCCCceEHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhHHHH
Confidence 9999999999988775 4899999999999999999998888888999999999999999985
No 15
>TIGR03178 allantoinase allantoinase. This enzyme carries out the first step in the degradation of allantoin, a ring-opening hydrolysis. The seed members of this model are all in the vicinity of other genes involved in the processes of xanthine/urate/allantoin catabolism. Although not included in the seed, many eukaryotic homologs of this family are included above the trusted cutoff. Below the noise cutoff are related hydantoinases.
Probab=100.00 E-value=2.1e-52 Score=416.09 Aligned_cols=360 Identities=30% Similarity=0.427 Sum_probs=307.9
Q ss_pred cEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHHHH
Q 014320 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAA 133 (427)
Q Consensus 54 ~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~ 133 (427)
|++|+|++|+++++...++|+|+||||++|++... +.+.++||++|++|+|||||+|+|+..+ +...++++.+++++
T Consensus 1 dl~i~~~~v~~~~~~~~~~v~i~dg~I~~i~~~~~-~~~~~~id~~g~~v~PG~ID~H~H~~~~--~~~~~~~~~~~~~~ 77 (443)
T TIGR03178 1 DLIIRGGRVILPNGEREADVGVKGGKIAAIGPDIL-GPAAKIIDAGGLVVFPGVVDTHVHINEP--GRTEWEGFETGTRA 77 (443)
T ss_pred CEEEECcEEECCCCceEEEEEEECCEEEEeeCCCC-CCCCeEEECCCCEEeccEeccccccCCC--CccccchHHHHHHH
Confidence 47899999999887778999999999999987532 3456899999999999999999999876 55667889999999
Q ss_pred HHcCCceEEecCc-CCCCC-cHHHHHHHHHHHhc-cccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecCCC-
Q 014320 134 ALAGGTTMHIDFV-IPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGS- 209 (427)
Q Consensus 134 ~l~~GvTtv~d~~-~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~- 209 (427)
++++||||++||. ...+. ...+.++...+... ...++++++.+.. .+..+++.++. +.|+.++|+|+++.+.
T Consensus 78 ~~~gGvTtv~dmp~~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~~~i~~~~-~~G~~~ik~~~~~~~~~ 153 (443)
T TIGR03178 78 AAAGGITTYIDMPLNSIPATTTRASLEAKFEAAKGKLAVDVGFWGGLV---PYNLDDLRELD-EAGVVGFKAFLSPSGDD 153 (443)
T ss_pred HHcCCeEEEEECCCCCCCCCCcHHHHHHHHHHhccCCceeEEEEeccC---CCCHHHHHHHH-HCCCcEEEEEecccCCC
Confidence 9999999999996 22222 34445555544443 4577777664433 23355677766 6899999999876433
Q ss_pred --ccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEE
Q 014320 210 --FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (427)
Q Consensus 210 --~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~ 287 (427)
...+++.+.++++.++++|+++++|+|+.+.+....+.+...|..+.+.|...+|..+|..++.+.++++++.++++|
T Consensus 154 ~~~~~~~~~l~~~~~~a~~~g~~v~~H~E~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~ae~~~~~~~~~la~~~g~~vh 233 (443)
T TIGR03178 154 EFPHVDDWQLYKGMRELARLGQLLLVHAENPAITSALGEEAPPQGGVGADAYLASRPVFAEVEAIRRTLALAKVTGCRVH 233 (443)
T ss_pred CcccCCHHHHHHHHHHHHhcCCeEEEeccChHHHHHHHHHHHhcCCCChhHhcCcCCHHHHHHHHHHHHHHHHHhCCCEE
Confidence 356889999999999999999999999998887777778899999999999999999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecC
Q 014320 288 VVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTD 367 (427)
Q Consensus 288 i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD 367 (427)
++|+++.++++.++++++.|+++++++||||++++++.+.. .+..++++||+|++.++++||+++++|.+++|+||
T Consensus 234 i~Hiss~~~~~~i~~~~~~g~~it~e~~ph~l~l~~~~~~~----~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~~i~SD 309 (443)
T TIGR03178 234 VVHLSSAEAVELITEAKQEGLDVTVETCPHYLTLTAEEVPD----GGTLAKCAPPIRDLANQEGLWEALLNGLIDCVVSD 309 (443)
T ss_pred EEeCCCHHHHHHHHHHHHCCCcEEEEECccceEecHHHhhC----cCcceEEcCCCCChHHHHHHHHHHHcCCccEEeCC
Confidence 99999999999999999999999999999999999887743 24688999999999999999999999999999999
Q ss_pred CCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 368 HCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 368 ~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
|+|++...|. ..+|+.+++|++|+|+.+|++++.++.+++++++++++++|.|||++
T Consensus 310 h~p~~~~~K~--~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~~~~~~t~~pA~~ 366 (443)
T TIGR03178 310 HSPCTPDLKR--AGDFFKAWGGIAGLQSTLDVMFDEAVQKRGLPLEDIARLMATNPAKR 366 (443)
T ss_pred CCCCChHHcC--cCChhhCCCCeeEHHHhHHHHHHHHHHhcCCCHHHHHHHHhHHHHHH
Confidence 9999987773 25899999999999999999997777888999999999999999985
No 16
>cd01315 L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology). But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.
Probab=100.00 E-value=2.7e-51 Score=409.72 Aligned_cols=363 Identities=29% Similarity=0.392 Sum_probs=307.8
Q ss_pred cEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHHHH
Q 014320 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAA 133 (427)
Q Consensus 54 ~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~ 133 (427)
|++|+|++|++++...+++|+|+||||++|++....+.+.++||++|++|+|||||+|+|+..+ +...++++.+.+++
T Consensus 1 dl~i~~~~v~~~~~~~~~~v~I~~g~I~~i~~~~~~~~~~~~iDa~G~~v~PG~ID~H~H~~~~--~~~~~e~~~~~s~a 78 (447)
T cd01315 1 DLVIKNGRVVTPDGVREADIAVKGGKIAAIGPDIANTEAEEVIDAGGLVVMPGLIDTHVHINEP--GRTEWEGFETGTKA 78 (447)
T ss_pred CEEEECCEEECCCCceEeEEEEECCEEEEEeCCCCCCCCCeEEECCCCEEeccEeeceeccCCC--CccccccHHHHHHH
Confidence 5799999999987777899999999999999764323467899999999999999999999876 55567888899999
Q ss_pred HHcCCceEEecCcC-C-CCCcHHHHHHHHHHHhc-cccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecCCC-
Q 014320 134 ALAGGTTMHIDFVI-P-INGSLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGS- 209 (427)
Q Consensus 134 ~l~~GvTtv~d~~~-~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~- 209 (427)
++++||||++||.. . +.....+.++...+... ...++++++..... ...++++++. +.|+.++|+|+++++.
T Consensus 79 al~gGvTtv~d~p~~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~~~~ei~~l~-~~G~~giKv~~~~~~~~ 154 (447)
T cd01315 79 AAAGGITTIIDMPLNSIPPTTTVENLEAKLEAAQGKLHVDVGFWGGLVP---GNLDQLRPLD-EAGVVGFKCFLCPSGVD 154 (447)
T ss_pred HHhCCceEEEeCCCCCCCCcCCHHHHHHHHHHhccCceeeEEEEEeecC---CCHHHHHHHH-HcCCcEEEEEecccCCC
Confidence 99999999999962 2 12234555655555543 36777776543322 2355667766 6799999999875432
Q ss_pred --ccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEE
Q 014320 210 --FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (427)
Q Consensus 210 --~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~ 287 (427)
+..+.+.+.++++.++++|+++.+|+|+.+.+..........|..+...+...+|..+|..++.+.++++++.|+++|
T Consensus 155 ~~~~~~~~~l~~~~~~a~~~g~~v~vH~e~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~~~~~~~~la~~~g~~ih 234 (447)
T cd01315 155 EFPAVDDEQLEEAMKELAKTGSVLAVHAENPEITEALQEQAKAKGKRDYRDYLASRPVFTEVEAIQRILLLAKETGCRLH 234 (447)
T ss_pred CcccCCHHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHhHhhcCCCChHHhhccCCHHHHHHHHHHHHHHHHHhCCCEE
Confidence 236889999999999999999999999988777666666777888888888899999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecC
Q 014320 288 VVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTD 367 (427)
Q Consensus 288 i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD 367 (427)
++|+++..+++.++.+++.|.++++++||||+.++++.+.. .+..++++||+|++.++++||+++++|.+++|+||
T Consensus 235 i~h~s~~~~~~~i~~~~~~g~~i~~e~~~h~l~~~~~~~~~----~~~~~~~~Pplr~~~~~~~l~~~l~~g~i~~i~SD 310 (447)
T cd01315 235 IVHLSSAEAVPLIREARAEGVDVTVETCPHYLTFTAEDVPD----GGTEFKCAPPIRDAANQEQLWEALENGDIDMVVSD 310 (447)
T ss_pred EEeCCCHHHHHHHHHHHHCCCceEEEeccccEEEcHHHccC----CCCceEECCCCCChHHHHHHHHHHhCCceeEEeCC
Confidence 99999999999999999999999999999999999888743 24689999999999999999999999999999999
Q ss_pred CCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 368 HCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 368 ~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
|+|++.++|..+..+|+.++.|++|+++.++.+++.++++++++++++++++|.|||++
T Consensus 311 h~p~~~~~k~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~pa~~ 369 (447)
T cd01315 311 HSPCTPELKLLGKGDFFKAWGGISGLQLGLPVMLTEAVNKRGLSLEDIARLMCENPAKL 369 (447)
T ss_pred CCCCCHHHhccCCCChhhCCCCeeEHHHhHHHHHHHHHHcCCCCHHHHHHHHhHHHHHH
Confidence 99999888864456899999999999999999997777788999999999999999985
No 17
>PRK02382 dihydroorotase; Provisional
Probab=100.00 E-value=2.7e-51 Score=407.53 Aligned_cols=352 Identities=26% Similarity=0.406 Sum_probs=290.4
Q ss_pred ccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHHH
Q 014320 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQA 132 (427)
Q Consensus 53 ~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~ 132 (427)
.|++|+|++|++......++|+|+||||++|++....+.+.++||++|++|+|||||+|+|+..+ +....+++.+.++
T Consensus 2 ~dl~i~n~~v~~~~~~~~~~v~I~dg~I~~i~~~~~~~~~~~~id~~g~~v~PG~ID~H~H~~~~--g~~~~e~~~~~~~ 79 (443)
T PRK02382 2 RDALLKDGRVYYNNSLQPRDVRIDGGKITAVGKDLDGSSSEEVIDARGMLLLPGGIDVHVHFREP--GYTHKETWYTGSR 79 (443)
T ss_pred ceEEEECCEEEeCCCceEEEEEEECCEEEEecCCCCCCCCCeEEECCCCEEcCCEeeeeeeccCC--CCCchhhHHHHHH
Confidence 57899999999876667899999999999998654333346899999999999999999999876 6667788899999
Q ss_pred HHHcCCceEEecCcCCCCC-cHHHHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHHHHcCCCeE-EEEEec-CC
Q 014320 133 AALAGGTTMHIDFVIPING-SLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSF-KFFMAY-KG 208 (427)
Q Consensus 133 ~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~i-k~~~~~-~~ 208 (427)
+++.+||||++++....+. ...+.++...+.. .++.+++++++... ...+++.++. ..|+..+ |+|+.+ .+
T Consensus 80 aa~~gGvTtv~~~~~t~p~~~~~~~~~~~~~~a~~~s~v~~~~~~~~~----~~~~~l~~l~-~~gv~~~gkv~~~~~~~ 154 (443)
T PRK02382 80 SAAAGGVTTVVDQPNTDPPTVDGESFDEKAELAARKSIVDFGINGGVT----GNWDPLESLW-ERGVFALGEIFMADSTG 154 (443)
T ss_pred HHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhCcCceEEEEEEeeec----cchhhHHHHH-hcCccceeEEEEEecCC
Confidence 9999999999999754333 4445555554444 34567776654332 1244566666 4588877 888754 23
Q ss_pred CccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEE
Q 014320 209 SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYV 288 (427)
Q Consensus 209 ~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i 288 (427)
....+++.+.++++.+++.|+++.+|+|+.+....... ...|...++.|...+|..+|..++.+.+.++++.|+++|+
T Consensus 155 ~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~--~~~g~~~~~~~~~~~p~~~E~~av~~~~~la~~~g~~~hi 232 (443)
T PRK02382 155 GMGIDEELFEEALAEAARLGVLATVHAEDEDLFDELAK--LLKGDADADAWSAYRPAAAEAAAVERALEVASETGARIHI 232 (443)
T ss_pred CcccCHHHHHHHHHHHHhcCCeEEEecCCHHHHHHhhH--hhcCCCCHhhCCCcCCHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 34567889999999999999999999998866443221 2346677788888899999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCC
Q 014320 289 VHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDH 368 (427)
Q Consensus 289 ~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~ 368 (427)
+|+++..+++.+++++ |++++|||||+++++++.. + +..+|++||+|++.++++||+++++|++++|+|||
T Consensus 233 ~h~ss~~~~~~i~~~~-----vt~ev~ph~L~l~~~~~~~--~--~~~~k~~PPlr~~~d~~aL~~~l~~g~i~~i~sDh 303 (443)
T PRK02382 233 AHISTPEGVDAARREG-----ITCEVTPHHLFLSRRDWER--L--GTFGKMNPPLRSEKRREALWERLNDGTIDVVASDH 303 (443)
T ss_pred EECCCHHHHHHHHHCC-----cEEEEchhhhhcCHHHHhc--c--CceEEEcCCCCChHHHHHHHHHHhCCCCCEEEcCC
Confidence 9999999999988654 8999999999999887732 1 35789999999999999999999999999999999
Q ss_pred CCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 369 CAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 369 ~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+|++.++|.. +|+.+|+|++|+|+.+|+++ .++.+++++++++++++|.|||++
T Consensus 304 ~P~~~~~K~~---~~~~~~~G~~g~e~~~~~~~-~~~~~~~~~l~~~~~~~t~~pA~~ 357 (443)
T PRK02382 304 APHTREEKDA---DIWDAPSGVPGVETMLPLLL-AAVRKNRLPLERVRDVTAANPARI 357 (443)
T ss_pred CCCCHHHhcC---ChhhCCCCcccHHHHHHHHH-HHHHcCCCCHHHHHHHHhHHHHHH
Confidence 9999888853 89999999999999999999 578888999999999999999985
No 18
>PRK09060 dihydroorotase; Validated
Probab=100.00 E-value=1.3e-50 Score=401.79 Aligned_cols=352 Identities=26% Similarity=0.363 Sum_probs=288.0
Q ss_pred CccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHH
Q 014320 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQ 131 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~ 131 (427)
+.+++|+|++|++++....++|+|+||+|++|++... +++.++||++|++|+|||||+|+|+..+ +..+++++.+.+
T Consensus 4 ~~d~~i~~~~v~~~~~~~~~~i~i~~g~I~~i~~~~~-~~~~~~iD~~G~~v~PG~ID~HvH~~~~--~~~~~e~~~t~~ 80 (444)
T PRK09060 4 TFDLILKGGTVVNPDGEGRADIGIRDGRIAAIGDLSG-ASAGEVIDCRGLHVLPGVIDSQVHFREP--GLEHKEDLETGS 80 (444)
T ss_pred cCcEEEECCEEECCCCCeeeEEEEECCEEEEecCCCC-CCCceEEECCCCEEccCEEeccccccCC--CCCccchHHHHH
Confidence 4578999999999877667899999999999986432 2346899999999999999999999876 666789999999
Q ss_pred HHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhc-cccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecC--
Q 014320 132 AAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYK-- 207 (427)
Q Consensus 132 ~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~-- 207 (427)
++++.+||||++|+....+. ...+.+....+... +.+++++++......+. +++.++....|+.++|+|+++.
T Consensus 81 ~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~a~~~~~~d~~~~~~~~~~~~---~~l~el~~~~gv~g~k~fm~~~~~ 157 (444)
T PRK09060 81 RAAVLGGVTAVFEMPNTNPLTTTAEALADKLARARHRMHCDFAFYVGGTRDNA---DELAELERLPGCAGIKVFMGSSTG 157 (444)
T ss_pred HHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhcccceeeEEEEeccCCCCH---HHHHHHHhhcCceEEEEEeccCCC
Confidence 99999999999999754322 45556655555444 36788887765443332 3455544345888999998642
Q ss_pred CCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEE
Q 014320 208 GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (427)
Q Consensus 208 ~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~ 287 (427)
.....++..+.++++. .|.++.+|+|+.+.+... +.+...| .+..|+..+|..+|..++.++++++++.|+++|
T Consensus 158 ~~~~~d~~~l~~~~~~---~~~~v~~H~E~~~l~~~~-~~~~~~g--~~~~~~~~~p~~aE~~av~~~~~la~~~~~~lh 231 (444)
T PRK09060 158 DLLVEDDEGLRRILRN---GRRRAAFHSEDEYRLRER-KGLRVEG--DPSSHPVWRDEEAALLATRRLVRLARETGRRIH 231 (444)
T ss_pred CcccCCHHHHHHHHHh---CCCeEEEECCCHHHHHHH-HHHHhcC--CcccccccCCHHHHHHHHHHHHHHHHHHCCCEE
Confidence 2223356667776544 489999999998776544 4455677 677888899999999999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCccc-ccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEec
Q 014320 288 VVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSW-LWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGT 366 (427)
Q Consensus 288 i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~-~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgS 366 (427)
++|+++.++++.++++++ .+++|+||||++++++. +.. .+..++++||+|++.++++||+++++|++++++|
T Consensus 232 i~h~st~~~v~~i~~~~~---~vt~ev~ph~l~l~~~~~~~~----~~~~~k~~PPlr~~~~~~~l~~al~~G~id~i~s 304 (444)
T PRK09060 232 VLHVSTAEEIDFLADHKD---VATVEVTPHHLTLAAPECYER----LGTLAQMNPPIRDARHRDGLWRGVRQGVVDVLGS 304 (444)
T ss_pred EEeCCCHHHHHHHHHhCC---CeEEEeChHHhccCchhhccc----CCceEEEeCCCCCHHHHHHHHHHHhCCCccEEec
Confidence 999999999999988765 38999999999999876 422 2368999999999999999999999999999999
Q ss_pred CCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 367 DHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 367 D~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
||+||+..+|.. +|+.+++|++|+|+.+|+++. .+.++.++++++++++|.||||+
T Consensus 305 Dh~p~~~~~k~~---~~~~~~~G~~g~e~~~~l~~~-~v~~g~l~~~~~~~~~s~~pa~~ 360 (444)
T PRK09060 305 DHAPHTLEEKAK---PYPASPSGMTGVQTLVPIMLD-HVNAGRLSLERFVDLTSAGPARI 360 (444)
T ss_pred CCCCCCHHHhcC---CcccCCCCcccHHHHHHHHHH-HHHcCCCCHHHHHHHHhHhHHHH
Confidence 999999888753 899999999999999999994 68888899999999999999986
No 19
>PRK07575 dihydroorotase; Provisional
Probab=100.00 E-value=5.2e-50 Score=397.12 Aligned_cols=353 Identities=25% Similarity=0.370 Sum_probs=280.9
Q ss_pred CCccEEEECcEEEcCCC-ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHH
Q 014320 51 SSSKILIKGGTVVNAHH-QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFS 129 (427)
Q Consensus 51 ~~~~~~i~~~~i~~~~~-~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~ 129 (427)
||++++|+|++|+++++ ...++|.|+||||++|++....+.+.++||++|++|+|||||+|+|+..+ +..+++++.+
T Consensus 1 ~~~~~~i~~~~i~~~~~~~~~~~I~I~dg~I~~ig~~~~~~~~~~vid~~g~~v~PG~ID~H~H~~~~--~~~~~e~~~~ 78 (438)
T PRK07575 1 MMMSLLIRNARILLPSGELLLGDVLVEDGKIVAIAPEISATAVDTVIDAEGLTLLPGVIDPQVHFREP--GLEHKEDLFT 78 (438)
T ss_pred CcceEEEECCEEECCCCCEEeeeEEEECCEEEEecCCCCCCCCCeEEECCCCEEcccEEEeeeccCCC--CCcCcchHHH
Confidence 35678999999998765 45689999999999998754322235899999999999999999998876 6678899999
Q ss_pred HHHHHHcCCceEEecCcCCCCC-cHHHHHHHHH-HHhccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecC
Q 014320 130 GQAAALAGGTTMHIDFVIPING-SLTAGFEAYE-KKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYK 207 (427)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~ 207 (427)
++++++++||||++||....+. ...+.+.... .......++++++.+... +.+.++.. ..++.++|.|+...
T Consensus 79 ~~~aa~~gGvTt~~dmp~~~p~~~~~~~~~~~~~~a~~~~~v~~~~~~~~~~---~~l~~l~~---~~~~~g~~~f~~~~ 152 (438)
T PRK07575 79 ASRACAKGGVTSFLEMPNTKPLTTTQAALDDKLARAAEKCVVNYGFFIGATP---DNLPELLT---ANPTCGIKIFMGSS 152 (438)
T ss_pred HHHHHHhCCEEEEEECCCCCCCCCcHHHHHHHHHHhccCcEEEEEEEccccc---cCHHHHHH---hhCCeEEEEEEeeC
Confidence 9999999999999999754322 3444444433 333457888888765432 22333332 23667889887432
Q ss_pred C-CccC-CHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCC
Q 014320 208 G-SFMI-NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTP 285 (427)
Q Consensus 208 ~-~~~~-~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~ 285 (427)
. .... +...+++.+ ++.+.++.+|+|+.+.+.... ....|...+..|...+|+.+|..++.+.++++++.|++
T Consensus 153 ~~~~~~~~~~~~~~~~---~~~~~~v~~h~e~~~l~~~~~--~~~~g~~~~~~~~~~~p~~aE~~av~~~~~la~~~g~~ 227 (438)
T PRK07575 153 HGPLLVDEEAALERIF---AEGTRLIAVHAEDQARIRARR--AEFAGISDPADHSQIQDEEAALLATRLALKLSKKYQRR 227 (438)
T ss_pred CCCcccCcHHHHHHHH---HhCCCEEEEeCcChHHHHhhh--HhhccCcCcccccccCcHHHHHHHHHHHHHHHHHHCCC
Confidence 1 1112 334444433 356999999999987543221 23356667888888999999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEe
Q 014320 286 LYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVG 365 (427)
Q Consensus 286 ~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lg 365 (427)
+|++|+++.++++.+++++ +..+++++|||||+++++++.. + +..+|++||+|+++++++||+++++|++++|+
T Consensus 228 lhi~HiSt~~~v~~i~~~k--~~~vt~ev~phhL~l~~~~~~~--~--~~~~k~~PPLR~~~d~~~L~~~l~~G~id~i~ 301 (438)
T PRK07575 228 LHILHLSTAIEAELLRQDK--PSWVTAEVTPQHLLLNTDAYER--I--GTLAQMNPPLRSPEDNEALWQALRDGVIDFIA 301 (438)
T ss_pred EEEEECCCHHHHHHHHHhc--CCCEEEEEchhhheeCHHHHhC--C--CceEEEeCCCCCHHHHHHHHHHHhCCCCCEEe
Confidence 9999999999999998876 4789999999999999988642 1 36899999999999999999999999999999
Q ss_pred cCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 366 TDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 366 SD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
|||+|++.++|. .+|+.+++|++|+|+.+|++|+. +.++++|++++++++|.||||+
T Consensus 302 sDh~p~~~~~k~---~~~~~~~~G~~g~e~~l~~l~~~-~~~~~lsl~~~~~~~s~npAk~ 358 (438)
T PRK07575 302 TDHAPHTLEEKA---QPYPNSPSGMPGVETSLPLMLTA-AMRGKCTVAQVVRWMSTAVARA 358 (438)
T ss_pred cCCCCCCHHHcc---CCcccCCCCcccHHHHHHHHHHH-HhcCCCCHHHHHHHHhhhHHHH
Confidence 999999988885 38999999999999999999965 5677899999999999999985
No 20
>TIGR00857 pyrC_multi dihydroorotase, multifunctional complex type. All proteins described by this model should represent active and inactive dihydroorotase per se and functionally equivalent domains of multifunctional proteins from higher eukaryotes, but exclude related proteins such as allantoinase.
Probab=100.00 E-value=1.9e-49 Score=390.62 Aligned_cols=341 Identities=26% Similarity=0.366 Sum_probs=282.4
Q ss_pred eeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCC
Q 014320 69 QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIP 148 (427)
Q Consensus 69 ~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~ 148 (427)
..++|+|+||||++|++.. .+.+.++||++|++|+|||||+|+|+..+ +..+.+++.+.++.++.+||||++++...
T Consensus 4 ~~~~v~I~~g~I~~i~~~~-~~~~~~~ida~g~~v~PG~ID~H~H~~~~--~~~~~~~~~~~~~~~~~~GvTtv~~~~~t 80 (411)
T TIGR00857 4 TEVDILVEGGRIKKIGKLR-IPPDAEVIDAKGLLVLPGFIDLHVHLRDP--GEEYKEDIESGSKAAAHGGFTTVADMPNT 80 (411)
T ss_pred EEEEEEEECCEEEEeeccC-CCCCCeEEECCCCEEecCEEEcccCCCCC--CCccHhHHHHHHHHHHhCCeEEEEEecCC
Confidence 4678999999999997522 23345799999999999999999999765 45677889999999999999999998654
Q ss_pred CCC-cHHHHHHHHHHHhc-cccceeceeccccCCC-hhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHH
Q 014320 149 ING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWD-EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCK 225 (427)
Q Consensus 149 ~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~ 225 (427)
.+. ...+.++...+... ...+++.++.+..... .+.++++.++. ..|+.+ ++|..+. .+..++..+.++++.++
T Consensus 81 ~p~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~~~~~l~e~~~l~-~~Gv~g-~~f~~~~-~~~~~~~~l~~~~~~a~ 157 (411)
T TIGR00857 81 KPPIDTPETLEWKLQRLKKVSLVDVHLYGGVTQGNQGKELTEAYELK-EAGAVG-RMFTDDG-SEVQDILSMRRALEYAA 157 (411)
T ss_pred CCCCCcHHHHHHHHHHhccCCcccEEEEEEEecCCccccHHHHHHHH-HCCcEE-EEEEeCC-cccCCHHHHHHHHHHHH
Confidence 322 44556665555543 4678887776665432 22356666666 578877 3333332 23467889999999999
Q ss_pred HcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhh
Q 014320 226 SLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARK 305 (427)
Q Consensus 226 ~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~ 305 (427)
++|+++.+|+|+++.+... ....|..+++.|...||..+|..++.+++.+++..++++|++|+++.++++.++.+|+
T Consensus 158 ~~g~~v~iH~E~~~l~~~~---~~~~g~~~~~~~~~~~p~~aE~~ai~~~~~la~~~~~~~~i~Hvs~~~~l~~i~~a~~ 234 (411)
T TIGR00857 158 IAGVPIALHAEDPDLIYGG---VMHEGPSAAQLGLPARPPEAEEVAVARLLELAKHAGCPVHICHISTKESLELIVKAKS 234 (411)
T ss_pred HcCCEEEEecCCHHHHhhh---hhcCCcccHhhCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHHHHH
Confidence 9999999999998765432 4556777888999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCcc
Q 014320 306 AGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRK 385 (427)
Q Consensus 306 ~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~ 385 (427)
+|++|++|+|||||+++.+.+.+ .+.+++++||+|++.++++||+++++|++++|+|||+||+..+|. .+|+.
T Consensus 235 ~g~~v~~ev~ph~L~~~~~~~~~----~~~~~k~~Pplr~~~~~~~L~~~l~~g~i~~i~sDh~p~~~~~k~---~~~~~ 307 (411)
T TIGR00857 235 QGIKITAEVTPHHLLLSEEDVAR----LDGNGKVNPPLREKEDRLALIEGLKDGIIDIIATDHAPHTLEEKT---KEFAA 307 (411)
T ss_pred cCCcEEEeechhhheecHHHHhC----CCccEEEcCCCCCHHHHHHHHHHHhcCCCcEEEcCCCCCChHHcc---CCHhh
Confidence 99999999999999999887743 237899999999999999999999999999999999999987775 38999
Q ss_pred CCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 386 IPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 386 ~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+++|++|+|+.+|+++ .++.+++++++++++++|.|||++
T Consensus 308 ~~~G~~g~e~~~~~~~-~~~~~~~~~~~~~~~~~t~~pa~~ 347 (411)
T TIGR00857 308 APPGIPGLETALPLLL-QLLVKGLISLKDLIRMLSINPARI 347 (411)
T ss_pred CCCCceeHHHHHHHHH-HHHHhCCCCHHHHHHHHhHHHHHH
Confidence 9999999999999999 456667899999999999999985
No 21
>PRK09357 pyrC dihydroorotase; Validated
Probab=100.00 E-value=3e-49 Score=391.99 Aligned_cols=355 Identities=27% Similarity=0.386 Sum_probs=287.5
Q ss_pred cEEEECcEEEcCCC-ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHHH
Q 014320 54 KILIKGGTVVNAHH-QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQA 132 (427)
Q Consensus 54 ~~~i~~~~i~~~~~-~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~ 132 (427)
+++|+|++|++++. ..+++|.|+||+|++|++... +++.++||++|++|+|||||+|+|+..+ +..+.+++..+++
T Consensus 2 ~~~i~~~~v~~~~~~~~~~~I~I~dg~I~~i~~~~~-~~~~~~iD~~g~~v~PG~ID~H~H~~~~--~~~~~e~~~~~~~ 78 (423)
T PRK09357 2 MILIKNGRVIDPKGLDEVADVLIDDGKIAAIGENIE-AEGAEVIDATGLVVAPGLVDLHVHLREP--GQEDKETIETGSR 78 (423)
T ss_pred cEEEEeEEEECCCCCcceeeEEEECCEEEEeeCCCC-CCCCeEEECCCCEEeCCEEecccccCCC--CccccccHHHHHH
Confidence 37999999998743 567899999999999986422 2356899999999999999999999776 5677899999999
Q ss_pred HHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhc-cccceeceeccccC-CChhhHHHHHHHHHHcCCCeEEEEEecCCC
Q 014320 133 AALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITK-WDEVVSDEMEVMVKEKGINSFKFFMAYKGS 209 (427)
Q Consensus 133 ~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~ 209 (427)
.++++||||++|+....+. ...+.++...+... ....++..++.... ..++.++++.++. ..|+..++ .++.
T Consensus 79 ~a~~~GvTt~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~gv~~~~----~~~~ 153 (423)
T PRK09357 79 AAAAGGFTTVVAMPNTKPVIDTPEVVEYVLDRAKEAGLVDVLPVGAITKGLAGEELTEFGALK-EAGVVAFS----DDGI 153 (423)
T ss_pred HHHhCCCeEEEecCCCCCCCCcHHHHHHHHHHhccCCcccEEEEEEEEeCCCCccHHHHHHHH-hCCcEEEE----CCCc
Confidence 9999999999999754322 44455555555543 34455555433321 1223456666665 45654432 3455
Q ss_pred ccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEE
Q 014320 210 FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV 289 (427)
Q Consensus 210 ~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~ 289 (427)
+..+++.++++++.++++|+++++|+++.+.... .+.+.|....+.+...+|...|..++.+.+.++++.|+++|++
T Consensus 154 ~~~~~~~l~~~~~~a~~~g~~v~iH~ee~~~~~~---~~~~~g~~~~~~~~~~~p~~~E~~~i~~~~~la~~~g~~~hi~ 230 (423)
T PRK09357 154 PVQDARLMRRALEYAKALDLLIAQHCEDPSLTEG---GVMNEGEVSARLGLPGIPAVAEEVMIARDVLLAEATGARVHIC 230 (423)
T ss_pred ccCCHHHHHHHHHHHHhcCCEEEEeCCCHHHhhc---ccccCChhhHHhCCCCCCHHHHHHHHHHHHHHHHHHCCcEEEE
Confidence 6678899999999999999999999987654321 1233444455566678999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCC
Q 014320 290 HVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHC 369 (427)
Q Consensus 290 H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~ 369 (427)
|+++.++++.++.++++|+.|++++||||++++++.+.. + +..++++||+|++.++++||+++++|+++++||||+
T Consensus 231 H~s~~~~~~~i~~a~~~g~~v~~e~~ph~L~~~~~~~~~--~--~~~~k~~Pplr~~~~~~~l~~~l~~G~~~~i~sDh~ 306 (423)
T PRK09357 231 HVSTAGSVELIRWAKALGIKVTAEVTPHHLLLTDEDLLT--Y--DPNYKVNPPLRTEEDREALIEGLKDGTIDAIATDHA 306 (423)
T ss_pred eCCCHHHHHHHHHHHHcCCCEEEEechHHheEcHHHHhC--c--CCceEECCCCCCHHHHHHHHHHHHcCCCeEEecCCC
Confidence 999999999999999999999999999999999987642 1 368899999999999999999999999999999999
Q ss_pred CCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 370 AFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 370 p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
|++..+|.. +|+.+++|++|+|+.++++++.++.++.++++++++++|.|||++
T Consensus 307 p~~~~~k~~---~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~~~~~~t~~~A~~ 360 (423)
T PRK09357 307 PHAREEKEC---EFEAAPFGITGLETALSLLYTTLVKTGLLDLEQLLEKMTINPARI 360 (423)
T ss_pred CCChHHccC---CHhhCCCCceEHHHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHH
Confidence 999887753 799999999999999999997777788999999999999999985
No 22
>PRK01211 dihydroorotase; Provisional
Probab=100.00 E-value=9e-50 Score=388.52 Aligned_cols=322 Identities=19% Similarity=0.278 Sum_probs=256.1
Q ss_pred EEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHHHHHHcCCce
Q 014320 61 TVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTT 140 (427)
Q Consensus 61 ~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvT 140 (427)
+++..+....++|+|+||||++|++.. .+.++||++| +|+|||||+|+|+..+ |..++|++.+++++|+++|||
T Consensus 6 ~~~~~~~~~~~di~I~dGkI~~i~~~~---~~~~~ida~g-~vlPG~ID~HvH~r~p--g~~~ked~~s~s~AAaaGGvT 79 (409)
T PRK01211 6 NFYYKGKFDYLEIEVEDGKIKSIKKDA---GNIGKKELKG-AILPAATDIHVHFRTP--GETEKEDFSTGTLSAIFGGTT 79 (409)
T ss_pred eeEEcCcEEEEEEEEECCEEEEecCCC---CCceEEEecc-EEcCCeEEeeeccCCC--CCcccCcHHHHHHHHHcCCcE
Confidence 445555566789999999999998653 2457899999 9999999999999998 888999999999999999999
Q ss_pred EEecCcCCCCC-cHHHHHHHHHHHhc-cccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHH
Q 014320 141 MHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLI 218 (427)
Q Consensus 141 tv~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~ 218 (427)
|++||.+..+. ...+.++...+... .+.++++++........ + +. ..|+.++|+|+++... ........
T Consensus 80 tv~dmPnt~P~~~~~e~~~~~~~~a~~~s~vd~~~~~~~~~~~~----~---~~-~~g~~~~k~f~~~~~~-~~~~~~~~ 150 (409)
T PRK01211 80 FIMDMPNNNIPIKDYNAFSDKLGRVAPKAYVDFSLYSMETGNNA----L---IL-DERSIGLKVYMGGTTN-TNGTDIEG 150 (409)
T ss_pred EEEECCCCCCCCChHHHHHHHHHHhccCceeeEEEEeccCCchh----h---HH-hccCcEEEEEcCCCcC-CCccccCH
Confidence 99999764332 55666766665553 46889988866532221 1 22 4588899999764211 00001112
Q ss_pred HHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHH
Q 014320 219 EGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAME 298 (427)
Q Consensus 219 ~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~ 298 (427)
..++.+++.|.++.+|+|+.+.+.... ...+ ..+.|...+|..+|..++.+.+.++.+ ++|++|+++.+++
T Consensus 151 ~~l~~~~~~g~~v~~H~E~~~l~~~~~---~~~~--~~~~~~~~rP~~aE~~ai~~~~~la~~---~~hi~HvSt~~~~- 221 (409)
T PRK01211 151 GEIKKINEANIPVFFHAELSECLRKHQ---FESK--NLRDHDLARPIECEIKAVKYVKNLDLK---TKIIAHVSSIDVI- 221 (409)
T ss_pred HHHHHHHccCCEEEEeccChHHhhhhh---hCcc--hHhhCCCCCCHHHHHHHHHHHHHHhCC---CcEEEEecChhhc-
Confidence 244566689999999999987654321 1112 224567789999999999999999976 5999999998875
Q ss_pred HHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhc
Q 014320 299 EIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAF 378 (427)
Q Consensus 299 ~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~ 378 (427)
.+|++|+|||||+|+++.. .+..+|++||||++.|+++||+++++|.+++|+|||+||+.++|
T Consensus 222 ---------~~vt~Ev~phhL~l~~~~~------~~~~~kvnPPLRs~~d~~aL~~~l~dG~ID~i~SDHaP~~~~eK-- 284 (409)
T PRK01211 222 ---------GRFLREVTPHHLLLNDDMP------LGSYGKVNPPLRDRWTQERLLEEYISGRFDILSSDHAPHTEEDK-- 284 (409)
T ss_pred ---------CceEEEecHHHHccccccc------cCCceeEcCCCCCHHHHHHHHHHHhCCCCCEEeCCCCCCChhHh--
Confidence 2799999999999998752 13689999999999999999999999999999999999998776
Q ss_pred CCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 379 GIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 379 ~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
++|+.+++|++|+|+.+|++| .+++++++|++++++++|.||||+
T Consensus 285 --~~~~~a~~G~~gle~~lpl~~-~~v~~~~isl~~~v~~~s~nPAki 329 (409)
T PRK01211 285 --QEFEYAKSGIIGVETRVPLFL-ALVKKKILPLDVLYKTAIERPASL 329 (409)
T ss_pred --CCHhhCCCCCCcHHHHHHHHH-HHHHcCCCCHHHHHHHHHHHHHHH
Confidence 379999999999999999999 578889999999999999999985
No 23
>PRK09236 dihydroorotase; Reviewed
Probab=100.00 E-value=3.3e-48 Score=385.45 Aligned_cols=357 Identities=25% Similarity=0.340 Sum_probs=289.6
Q ss_pred ccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHHH
Q 014320 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQA 132 (427)
Q Consensus 53 ~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~ 132 (427)
.+++|+|++|++++.....+|+|+||+|++|++....+++.++||++|++|+|||||+|+|+..+ +....+++.+.++
T Consensus 2 ~~~~i~~~~v~~~~~~~~~~i~i~~g~I~~i~~~~~~~~~~~~id~~g~~v~PG~ID~HvH~~~~--~~~~~e~~~~~~~ 79 (444)
T PRK09236 2 KRILIKNARIVNEGKIFEGDVLIENGRIAKIASSISAKSADTVIDAAGRYLLPGMIDDQVHFREP--GLTHKGDIASESR 79 (444)
T ss_pred ccEEEECCEEEcCCCceEeEEEEECCEEEEecCCCCCCCCCeEEECCCCEECCCEEEcccccccC--cccccccHHHHHH
Confidence 46899999999976666789999999999998754322456899999999999999999999876 5556678888899
Q ss_pred HHHcCCceEEecCcCCCCC-cHHHHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecC-CC
Q 014320 133 AALAGGTTMHIDFVIPING-SLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYK-GS 209 (427)
Q Consensus 133 ~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~-~~ 209 (427)
+++.+||||++||....+. ...+.+....+.. ....++++++.+... +..+++.++. ..|+.++|+|++.. +.
T Consensus 80 aa~~~GvTtv~d~p~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~~~~e~~~l~-~~g~~g~k~~~~~~~~~ 155 (444)
T PRK09236 80 AAVAGGITSFMEMPNTNPPTTTLEALEAKYQIAAQRSLANYSFYFGATN---DNLDEIKRLD-PKRVCGVKVFMGASTGN 155 (444)
T ss_pred HHHhCCcEEEEeCCCCCCCcCcHHHHHHHHHHhccCeEEEEEEEeccCc---ccHHHHHHHH-HccCcEEEEEeccCCCC
Confidence 9999999999999754322 3345555444443 346778887764332 2356677766 67889999998642 21
Q ss_pred c-cCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHH-cCC-CCcccccccCCHHHHHHHHHHHHHHHHhcCCCE
Q 014320 210 F-MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIE-LGI-TGPEGHALSRPPLLEGEATTRAIRLAEFVNTPL 286 (427)
Q Consensus 210 ~-~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~-~G~-~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~ 286 (427)
. ..+.+.++++++ ..++++.+|+|+.+.+......+.+ .|. ..+..|...||..+|..++.+.++++++.++++
T Consensus 156 ~~~~~~~~~~~~~~---~~~~~v~~H~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~rp~~ae~~av~~~~~la~~~~~~~ 232 (444)
T PRK09236 156 MLVDNPETLERIFR---DAPTLIATHCEDTPTIKANLAKYKEKYGDDIPAEMHPLIRSAEACYKSSSLAVSLAKKHGTRL 232 (444)
T ss_pred cccCcHHHHHHHHH---hcCCEEEEecCCHHHHHHHHHHHHHhcCCCCChhhccccCCHHHHHHHHHHHHHHHHHHCCCE
Confidence 2 234456666654 4589999999998776544444433 364 356678888999999999999999999999999
Q ss_pred EEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEec
Q 014320 287 YVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGT 366 (427)
Q Consensus 287 ~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgS 366 (427)
|++|+++.++++.+++++..|.++++++||||++++++++.. .+..++++||+|.+.++++||+++++|++++|||
T Consensus 233 hi~h~st~~~~~~i~~~~~~g~~vt~e~~~H~l~l~~~~~~~----~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~~igt 308 (444)
T PRK09236 233 HVLHISTAKELSLFENGPLAEKRITAEVCVHHLWFDDSDYAR----LGNLIKCNPAIKTASDREALRQALADDRIDVIAT 308 (444)
T ss_pred EEEeCCCHHHHHHHHHHHHCCCCEEEEEchhhhhcCHHHHhc----cCceEEECCCCCCHHHHHHHHHHHhCCCCcEEEC
Confidence 999999999999999999999999999999999999988743 2468999999999999999999999999999999
Q ss_pred CCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 367 DHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 367 D~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
||+|+..++|. .+|+.+++|++++|+.++++| ..+.++.++++++++++|.|||++
T Consensus 309 Dh~p~~~~~k~---~~~~~~~~G~~~~e~~l~~l~-~~v~~~~~~~~~~~~~~t~~pA~~ 364 (444)
T PRK09236 309 DHAPHTWEEKQ---GPYFQAPSGLPLVQHALPALL-ELVHEGKLSLEKVVEKTSHAPAIL 364 (444)
T ss_pred CCCCCCHHHhc---CCcccCCCCcccHHHHHHHHH-HHHHhcCCCHHHHHHHHHHhHHHh
Confidence 99999887774 389999999999999999999 567788899999999999999985
No 24
>PRK04250 dihydroorotase; Provisional
Probab=100.00 E-value=2.3e-46 Score=365.00 Aligned_cols=318 Identities=23% Similarity=0.296 Sum_probs=249.5
Q ss_pred CcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHHHHHHcCC
Q 014320 59 GGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGG 138 (427)
Q Consensus 59 ~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~G 138 (427)
+++|++.....+++|+|+||||++|++. . .++.++||++|++|+|||||+|+|+..+ +..+++++.+++++++++|
T Consensus 3 ~~~v~~~~~~~~~~i~i~~G~I~~i~~~-~-~~~~~~iD~~g~~v~PG~ID~HvH~~~~--~~~~~e~~~~~~~aa~~gG 78 (398)
T PRK04250 3 EGKFLLKGRIVEGGIGIENGRISKISLR-D-LKGKEVIKVKGGIILPGLIDVHVHLRDF--EESYKETIESGTKAALHGG 78 (398)
T ss_pred eEEEEECCcEEEEEEEEECCEEEEeeCC-C-CCCCeEEECCCCEEccCEEeccccccCC--CCCcHHHHHHHHHHHHhCC
Confidence 5677877766689999999999999741 1 1346899999999999999999999765 5667899999999999999
Q ss_pred ceEEecCcCCCCC-cHHHHHHHHHHHhc-cccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHH
Q 014320 139 TTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDEL 216 (427)
Q Consensus 139 vTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~ 216 (427)
|||++|+.+..+. ...+.++...+... +++++++++. .... ...++.++. . ..+|+|+.+... ....+.
T Consensus 79 vTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~-~~~~---~~~~l~~l~-~---~~~k~f~~~~~~-~~~~~~ 149 (398)
T PRK04250 79 ITLVFDMPNTKPPIMDEKTYEKRMRIAEKKSYADYALNF-LIAG---NCEKAEEIK-A---DFYKIFMGASTG-GIFSEN 149 (398)
T ss_pred eEEEEECCCCCCCCCcHHHHHHHHHHhCcCceeeEEEEE-ecCC---CHHHHHHHH-h---hheEEEEecCCC-chhHHH
Confidence 9999999754332 45566666555554 5788998876 3322 233344443 1 257888754221 112222
Q ss_pred HHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHH
Q 014320 217 LIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDA 296 (427)
Q Consensus 217 l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~ 296 (427)
+... ..+.+..+.+|+|+.+.+. ....+|..+|..++.+++.+++.+++++|++|+++.++
T Consensus 150 ~~~~---~~~~~~~v~~H~E~~~~~~----------------~~~~~p~~aE~~av~r~~~la~~~~~~lhi~HvSt~~~ 210 (398)
T PRK04250 150 FEVD---YACAPGIVSVHAEDPELIR----------------EFPERPPEAEVVAIERALEAGKKLKKPLHICHISTKDG 210 (398)
T ss_pred HHHH---HHhcCCeEEEEecChhhhh----------------cccCCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHH
Confidence 2221 2233567999999976542 12358999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCC-EEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhh
Q 014320 297 MEEIAKARKAGQR-VIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQ 375 (427)
Q Consensus 297 ~~~i~~~~~~G~~-v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~ 375 (427)
++.+++ +|++ |++|+|||||+|+++.+. .+..+|++||||++.|+++||+++. .+++|+|||+||+.++
T Consensus 211 ~~~i~~---~g~~~vt~Ev~ph~L~l~~~~~~-----~~~~~k~~PPLR~~~d~~aL~~~l~--~Id~i~sDHaP~~~~~ 280 (398)
T PRK04250 211 LKLILK---SNLPWVSFEVTPHHLFLTRKDYE-----RNPLLKVYPPLRSEEDRKALWENFS--KIPIIASDHAPHTLED 280 (398)
T ss_pred HHHHHH---cCCCcEEEEeCHHHhccCHHHHC-----CCCceEEcCCCCCHHHHHHHHHhhc--cCCEEEcCCcccCHHH
Confidence 888854 5887 999999999999998762 1378999999999999999999996 4999999999999887
Q ss_pred hhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 376 KAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 376 ~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
|. .+++|++|+|+.+|++|+ ++.+++++++++++++|.|||++
T Consensus 281 k~-------~~~~G~~g~e~~lpl~~~-~v~~~~lsl~~~v~~~t~npAk~ 323 (398)
T PRK04250 281 KE-------AGAAGIPGLETEVPLLLD-AANKGMISLFDIVEKMHDNPARI 323 (398)
T ss_pred hh-------cCCCCcchHHHHHHHHHH-HHHhcCCCHHHHHHHHHHHHHHH
Confidence 73 247999999999999994 78889999999999999999985
No 25
>PRK00369 pyrC dihydroorotase; Provisional
Probab=100.00 E-value=2.8e-45 Score=355.10 Aligned_cols=299 Identities=21% Similarity=0.238 Sum_probs=238.7
Q ss_pred eeeEEEeCCeEEEeeCCCCCCCCceEEeC-CCCEEeccccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCC
Q 014320 70 IADVYVEDGIVVAVQPNINVGDDVKVLDA-TGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIP 148 (427)
Q Consensus 70 ~~~i~i~~g~I~~vg~~~~~~~~~~viD~-~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~ 148 (427)
+..|.|++|+|..|++.. +.+.++||+ +|++|+|||||+|+|+..+ |..++|++.+++++|+++||||++||.+.
T Consensus 13 ~~~~~~~~~~~~~i~~~~--~~~~~~id~~~G~~vlPG~ID~HvH~r~p--g~~~~ed~~sgs~AAa~GGvTtv~~mPnt 88 (392)
T PRK00369 13 KEIKEICINFDRRIKEIK--SRCKPDLDLPQGTLILPGAIDLHVHLRGL--KLSYKEDVASGTSEAAYGGVTLVADMPNT 88 (392)
T ss_pred CceEEEeeeeeeeEeecc--CCCCceeecCCCCEEeCCEEEcccccCCC--CCcccccHHHHHHHHHhCCcEEEEECCCC
Confidence 467889999999998752 346789999 6999999999999999998 88889999999999999999999999764
Q ss_pred CCC-cHHHHHHHHHHHhc-cccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHH
Q 014320 149 ING-SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS 226 (427)
Q Consensus 149 ~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~ 226 (427)
.+. ...+.++...+... .+.++++++...... .+++. ..|+.++|.|.+. ..+.+. ++.+.+
T Consensus 89 ~P~~~~~~~l~~~~~~a~~~~~vd~~~~~~~~~~----~~el~----~~~~~g~k~f~~~----~~~~~~----~~~~~~ 152 (392)
T PRK00369 89 IPPLNTPEAITEKLAELEYYSRVDYFVYSGVTKD----PEKVD----KLPIAGYKIFPED----LEREET----FRVLLK 152 (392)
T ss_pred CCCCChHHHHHHHHHHhCcCCeEEEEEEeeccCC----HHHHH----HhhCceEEEECCC----CchHHH----HHHHHH
Confidence 333 56666766666554 478899888654321 12232 3467789988521 122333 344445
Q ss_pred cCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhc
Q 014320 227 LGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKA 306 (427)
Q Consensus 227 ~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~ 306 (427)
++.++.+|+|+.+.+... +...+|..+|..++.+...+ +++|++|+++.+++ +.+|++
T Consensus 153 ~~~~v~~HaE~~~l~~~~--------------~~~~rp~~aE~~ai~~~~~~-----~~lhi~HvSt~~~v---~~ak~~ 210 (392)
T PRK00369 153 SRKLKILHPEVPLALKSN--------------RKLRRNCWYEIAALYYVKDY-----QNVHITHASNPRTV---RLAKEL 210 (392)
T ss_pred hCCEEEEeCCCHHHhhcc--------------hhcccCHHHHHHHHHHHHHh-----CCEEEEECCCHHHH---HHHHHC
Confidence 568999999997654311 22358888888887776666 89999999998864 566777
Q ss_pred CCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccC
Q 014320 307 GQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKI 386 (427)
Q Consensus 307 G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~ 386 (427)
| |++|+|||||+|+++. +..+|++||||++.|+++||+++++ +++|+|||+||+.++|. .+|+++
T Consensus 211 g--vt~Ev~pHhL~l~~~~--------~~~~k~~PPLR~~~dr~aL~~~l~~--id~i~SDHaP~~~~~K~---~~f~~~ 275 (392)
T PRK00369 211 G--FTVDITPHHLLVNGEK--------DCLTKVNPPIRDINERLWLLQALSE--VDAIASDHAPHSSFEKL---QPYEVC 275 (392)
T ss_pred C--CeEEechhHheeccCC--------CCceEEeCCCCCHHHHHHHHHHHHh--CCEEEeCCCCCCHHHcc---CCHhhC
Confidence 7 7889999999998752 2578999999999999999999998 99999999999988874 389999
Q ss_pred CCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 387 PNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 387 ~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
++|++|+|+.+|++|+ ++.++.++++++++++|.|||++
T Consensus 276 ~~Gi~GlE~~lpll~~-~v~~~~lsl~~~v~~~s~nPA~i 314 (392)
T PRK00369 276 PPGIAALSFTPPFIYT-LVSKGILSIDRAVELISTNPARI 314 (392)
T ss_pred CCCCeeHHHHHHHHHH-HHHcCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999995 77888999999999999999985
No 26
>cd01318 DHOase_IIb Dihydroorotase (DHOase), subgroup IIb; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This group contains the archeal members of the DHOase family.
Probab=100.00 E-value=4.2e-45 Score=352.23 Aligned_cols=300 Identities=29% Similarity=0.410 Sum_probs=249.9
Q ss_pred CCEEeccccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHh-ccccceeceeccc
Q 014320 100 GKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKA-KNSCMDYGFHMAI 177 (427)
Q Consensus 100 g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~ 177 (427)
|++|+||+||+|+|+..+ |..++|++.+++++|+++||||++||.+..+. ...+.++...+.. ..+.+++++++..
T Consensus 1 G~~vlPG~iD~HvH~r~p--g~~~~ed~~s~t~aA~~GGvTtv~~mPnt~P~~~~~~~~~~~~~~a~~~~~vd~~~~~~~ 78 (361)
T cd01318 1 GLLILPGVIDIHVHFREP--GLTYKEDFVSGSRAAAAGGVTTVMDMPNTKPPTTTAEALYEKLRLAAAKSVVDYGLYFGV 78 (361)
T ss_pred CCEEecCeeEeeecCCCC--CCCccCcHHHHHHHHHcCCCEEEEECCCCCCCCCcHHHHHHHHHHhccCceeEEEEEEee
Confidence 789999999999999988 77889999999999999999999999754333 4556666665555 3468899888764
Q ss_pred cCCChhhHHHHHHHHHHcCCCeEEEEEecC-CCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCc
Q 014320 178 TKWDEVVSDEMEVMVKEKGINSFKFFMAYK-GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGP 256 (427)
Q Consensus 178 ~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~-~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~ 256 (427)
... +++.++. ..|+.++|.|+.+. +....+...+.++++.+. .++.+|+|+.+.+........+.+
T Consensus 79 ~~~-----~~l~~~~-~~~~~g~k~f~~~~~~~~~~~~~~l~~~~~~~~---~~v~~H~E~~~l~~~~~~~~~~~~---- 145 (361)
T cd01318 79 TGS-----EDLEELD-KAPPAGYKIFMGDSTGDLLDDEETLERIFAEGS---VLVTFHAEDEDRLRENRKELKGES---- 145 (361)
T ss_pred cCh-----hhHHHHH-HhhCcEEEEEEecCCCCcCCCHHHHHHHHHhcC---CeEEEeCCChHHHHHHHhhhhhcc----
Confidence 332 3455555 56788999998642 122257888888888774 789999999877654433332222
Q ss_pred ccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCce
Q 014320 257 EGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAK 336 (427)
Q Consensus 257 ~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~ 336 (427)
.|...||..+|..++.+.+.+++..++++|++|+++.++++.++.+| .+|++++|||||+++++.+.+ .+.+
T Consensus 146 -~~~~~~P~~aE~~av~r~~~la~~~~~~~hi~Hvs~~~~~~~i~~~k---~~vt~ev~ph~L~l~~~~~~~----~~~~ 217 (361)
T cd01318 146 -AHPRIRDAEAAAVATARALKLARRHGARLHICHVSTPEELKLIKKAK---PGVTVEVTPHHLFLDVEDYDR----LGTL 217 (361)
T ss_pred -CCCCcCCHHHHHHHHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHHhC---CCeEEEeCHHHhhcCHHHHhc----CCCe
Confidence 66778999999999999999999999999999999999999999887 589999999999999887642 2468
Q ss_pred eEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHH
Q 014320 337 YVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYV 416 (427)
Q Consensus 337 ~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v 416 (427)
++++||+|++.++++||+++++|.+++++|||+||+..+|. .+|+.+++|++|+|+.+|+++ .++.++++++++++
T Consensus 218 ~k~~PPlr~~~d~~aL~~~l~~G~id~i~SDh~P~~~~~k~---~~~~~a~~G~~g~e~~l~~~~-~~v~~~~l~l~~a~ 293 (361)
T cd01318 218 GKVNPPLRSREDRKALLQALADGRIDVIASDHAPHTLEEKR---KGYPAAPSGIPGVETALPLML-TLVNKGILSLSRVV 293 (361)
T ss_pred EEEeCCCCCHHHHHHHHHHHhCCCCCEEeeCCCCCCHHHcc---CChhhCCCCCccHHHHHHHHH-HHHHcCCCCHHHHH
Confidence 99999999999999999999999999999999999988875 379999999999999999998 57778889999999
Q ss_pred HHHchhhhcC
Q 014320 417 RLTSTEWGRL 426 (427)
Q Consensus 417 ~~~t~npA~~ 426 (427)
+++|.|||++
T Consensus 294 ~~~t~nPA~~ 303 (361)
T cd01318 294 RLTSHNPARI 303 (361)
T ss_pred HHHhHHHHHH
Confidence 9999999985
No 27
>cd01317 DHOase_IIa Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis. This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth.
Probab=100.00 E-value=1e-44 Score=353.16 Aligned_cols=317 Identities=27% Similarity=0.344 Sum_probs=267.0
Q ss_pred ceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhcc-ccce
Q 014320 93 VKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKN-SCMD 170 (427)
Q Consensus 93 ~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~-~~~~ 170 (427)
.++||++|++|+||+||+|+|+..+ +...++++.+++++++.+||||++||....+. ...+.++..++...+ ..++
T Consensus 2 ~~~iD~~g~~vlPG~iD~HvH~~~~--~~~~~e~~~s~s~aA~~GGvTtii~~p~~~p~~~~~~~~~~~~~~~~~~~~~~ 79 (374)
T cd01317 2 AEVIDAEGKILAPGLVDLHVHLREP--GFEYKETLESGAKAAAAGGFTTVVCMPNTNPVIDNPAVVELLKNRAKDVGIVR 79 (374)
T ss_pred CeEEECCCCEEecCEEeeccccCCC--CccccchHHHHHHHHHhCCCcEEEECCCCCCCCCCHHHHHHHHHHhccCCcee
Confidence 4789999999999999999999887 55678999999999999999999999754333 455666666655543 5666
Q ss_pred eceeccccCCCh-hhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHH
Q 014320 171 YGFHMAITKWDE-VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMI 249 (427)
Q Consensus 171 ~~~~~~~~~~~~-~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~ 249 (427)
+.++++...... +.++++.++. ..|+.++|.+ +....+...+.++++.+++.|.++.+|+|+.+.+.. ...
T Consensus 80 ~~~~~~~~~~~~~~~~~~i~~l~-~~G~~~~k~~----~~~~~~~~~l~~~~~~~~~~g~~v~~H~E~~~~~~~---~~~ 151 (374)
T cd01317 80 VLPIGALTKGLKGEELTEIGELL-EAGAVGFSDD----GKPIQDAELLRRALEYAAMLDLPIIVHPEDPSLAGG---GVM 151 (374)
T ss_pred EEEEEEEeeCCCcccHHHHHHHH-HCCcEEEEcC----CcCCCCHHHHHHHHHHHHhcCCeEEEecCChhhhhc---cCc
Confidence 666655544332 2467788877 6788888843 223468889999999999999999999998876532 233
Q ss_pred HcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCC
Q 014320 250 ELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHS 329 (427)
Q Consensus 250 ~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~ 329 (427)
..|...+..+...+|..+|..++.++++++++.++++|++|+++.++++.++++++.|+.+++++||||++++++.+..
T Consensus 152 ~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~~~~i~i~h~ss~~~l~~i~~~~~~G~~~~~e~~~h~L~ld~~~~~~- 230 (374)
T cd01317 152 NEGKVASRLGLPGIPPEAETIMVARDLELAEATGARVHFQHLSTARSLELIRKAKAKGLPVTAEVTPHHLLLDDEALES- 230 (374)
T ss_pred cCChhhHHhCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHHHCCCCEEEEecHHHHhcCHHHHhc-
Confidence 4555566677788999999999999999999999999999999999999999999999999999999999999988743
Q ss_pred CcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCC
Q 014320 330 DFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQ 409 (427)
Q Consensus 330 ~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~ 409 (427)
.+..++++||+|++.+++.||+++++|++++|||||+|++...|.. +|+.+++|++|+++.++.+++.+++.+.
T Consensus 231 ---~~~~~k~~Pplr~~~~~~~l~~~~~~G~i~~igsDh~p~~~~~k~~---~~~~~~~Gi~g~e~~l~~~~~~~~~~~~ 304 (374)
T cd01317 231 ---YDTNAKVNPPLRSEEDREALIEALKDGTIDAIASDHAPHTDEEKDL---PFAEAPPGIIGLETALPLLWTLLVKGGL 304 (374)
T ss_pred ---cCCceEEcCCCCCHHHHHHHHHHHhcCCceEEEcCCCCCCHHHccC---CHhhCCCcHhHHHHHHHHHHHHHHHcCC
Confidence 2468899999999999999999999999999999999999887753 7999999999999999999988888888
Q ss_pred CCHHHHHHHHchhhhcC
Q 014320 410 ISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 410 l~l~~~v~~~t~npA~~ 426 (427)
++++++++++|.|||++
T Consensus 305 ~~~~~~~~~~t~npA~~ 321 (374)
T cd01317 305 LTLPDLIRALSTNPAKI 321 (374)
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 99999999999999985
No 28
>cd01302 Cyclic_amidohydrolases Cyclic amidohydrolases, including hydantoinase, dihydropyrimidinase, allantoinase, and dihydroorotase, are involved in the metabolism of pyrimidines and purines, sharing the property of hydrolyzing the cyclic amide bond of each substrate to the corresponding N-carbamyl amino acids. Allantoinases catalyze the degradation of purines, while dihydropyrimidinases and hydantoinases, a microbial counterpart of dihydropyrimidinase, are involved in pyrimidine degradation. Dihydroorotase participates in the de novo synthesis of pyrimidines.
Probab=100.00 E-value=1.3e-43 Score=339.78 Aligned_cols=278 Identities=33% Similarity=0.437 Sum_probs=234.0
Q ss_pred CEEeccccccccccccCcCCCC-ChhhHHHHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHh-ccccceeceeccc
Q 014320 101 KFVMPGGIDPHTHLAMEFMGSE-TIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKA-KNSCMDYGFHMAI 177 (427)
Q Consensus 101 ~~v~PG~ID~H~H~~~~~~g~~-~~e~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~ 177 (427)
++|+||+||+|+|+..+ +.. +++++.+++++|+++||||++||.+..+. ...+.++...+.. .++.++++++...
T Consensus 1 ~~vlPG~iD~HvH~r~p--g~~~~~e~~~t~t~aA~~GG~Ttv~~mpn~~p~~~~~~~~~~~~~~a~~~~~~d~~~~~~~ 78 (337)
T cd01302 1 LLVLPGFIDIHVHLRDP--GGTTYKEDFESGSRAAAAGGVTTVIDMPNTGPPPIDLPAIELKIKLAEESSYVDFSFHAGI 78 (337)
T ss_pred CEecCCeeEeeeccCCC--CCCCchhHHHHHHHHHHhCCCcEEEECCCCCCCCCcHHHHHHHHHHhCcCcEeeEEEEEec
Confidence 57999999999999988 655 88999999999999999999999754333 3455555544444 4568899888665
Q ss_pred cCCChhhHHHHHHHHHHcCCCeEEEEEecCCCc--cCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCC
Q 014320 178 TKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSF--MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITG 255 (427)
Q Consensus 178 ~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~--~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~ 255 (427)
... +.++++.++. ..|+.++|+|+.+.... ..+++.+.++++.+++.|+++.+|+|
T Consensus 79 ~~~--~~~~el~~l~-~~Gv~g~K~f~~~~~~~~~~~~~~~l~~~~~~~~~~g~~v~~H~E------------------- 136 (337)
T cd01302 79 GPG--DVTDELKKLF-DAGINSLKVFMNYYFGELFDVDDGTLMRTFLEIASRGGPVMVHAE------------------- 136 (337)
T ss_pred cCc--cCHHHHHHHH-HcCCcEEEEEEeccCCCccccCHHHHHHHHHHHHhcCCeEEEeHH-------------------
Confidence 442 2466777776 68999999998754222 56889999999999999999999988
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCc
Q 014320 256 PEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAA 335 (427)
Q Consensus 256 ~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~ 335 (427)
+.+.++++.|+++|++|+++.++++.++.+|++|++|++|+||||++++++++.. .+.
T Consensus 137 ------------------r~~~la~~~g~~l~i~Hiss~~~le~i~~ak~~g~~vt~ev~ph~L~l~~~~~~~----~~~ 194 (337)
T cd01302 137 ------------------RAAQLAEEAGANVHIAHVSSGEALELIKFAKNKGVKVTCEVCPHHLFLDESMLRL----NGA 194 (337)
T ss_pred ------------------HHHHHHHHhCCcEEEEeCCCHHHHHHHHHHHHCCCcEEEEcChhhheeCHHHhhC----CCc
Confidence 2245667789999999999999999999999999999999999999999887732 236
Q ss_pred eeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHH
Q 014320 336 KYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDY 415 (427)
Q Consensus 336 ~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~ 415 (427)
.++++||+|++.++++||+++++|.+++|+|||+|++...|..+ .+|+.+++|++|+|+.++++++.++ +++++++++
T Consensus 195 ~~k~~Pplr~~~~~~~L~~~l~~G~id~i~sDh~p~~~~~k~~~-~~~~~a~~G~~g~e~~l~~~~~~~~-~~~i~~~~~ 272 (337)
T cd01302 195 WGKVNPPLRSKEDREALWEGVKNGKIDTIASDHAPHSKEEKESG-KDIWKAPPGFPGLETRLPILLTEGV-KRGLSLETL 272 (337)
T ss_pred eEEEeCCCCCHHHHHHHHHHHhCCCCCEEecCCCCCCHHHhccC-CCcccCCCCcccHHHHHHHHHHHHH-hcCCCHHHH
Confidence 89999999999999999999999999999999999998877532 4799999999999999999997665 457999999
Q ss_pred HHHHchhhhcC
Q 014320 416 VRLTSTEWGRL 426 (427)
Q Consensus 416 v~~~t~npA~~ 426 (427)
++++|.|||++
T Consensus 273 ~~~~s~~pA~~ 283 (337)
T cd01302 273 VEILSENPARI 283 (337)
T ss_pred HHHHHHHHHHH
Confidence 99999999985
No 29
>cd01316 CAD_DHOase The eukaryotic CAD protein is a trifunctional enzyme of carbamoylphosphate synthetase-aspartate transcarbamoylase-dihydroorotase, which catalyzes the first three steps of de novo pyrimidine nucleotide biosynthesis. Dihydroorotase (DHOase) catalyzes the third step, the reversible interconversion of carbamoyl aspartate to dihydroorotate.
Probab=100.00 E-value=3.1e-41 Score=321.72 Aligned_cols=273 Identities=24% Similarity=0.309 Sum_probs=215.8
Q ss_pred CEEeccccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhc-cccceeceecccc
Q 014320 101 KFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAIT 178 (427)
Q Consensus 101 ~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 178 (427)
.+|+|||||.|+|+..+ |..++|++.+++++|+++||||++||.+..+. ...+.++...+... .+.++++++.+..
T Consensus 2 ~~vlPG~ID~HvH~r~p--g~~~~ed~~sgs~AAa~GGvTtv~dmPnt~P~~~~~~~~~~~~~~a~~~s~vd~~~~~~~~ 79 (344)
T cd01316 2 TIRLPGLIDVHVHLREP--GATHKEDFASGTKAALAGGFTMVRAMPNTNPSIVDVASLKLVQSLAQAKARCDYAFSIGAT 79 (344)
T ss_pred eEEeCCeEEeeeccCCC--CcCCcChHHHHHHHHHhCCCeEEEECCCCCCCCCCHHHHHHHHHHhccCcEEeEEEEeeec
Confidence 47999999999999998 78889999999999999999999999754332 45566666665554 4789999886664
Q ss_pred CCChhhHHHHHHHHHHcCCCeEEEEEecCCCc-cCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcc
Q 014320 179 KWDEVVSDEMEVMVKEKGINSFKFFMAYKGSF-MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPE 257 (427)
Q Consensus 179 ~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~-~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~ 257 (427)
..+. .++.++. . .+.++|+|+.+.... ..++.........+...+.++.+|+|+.
T Consensus 80 ~~~~---~~~~~l~-~-~~~g~k~f~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~e~~------------------- 135 (344)
T cd01316 80 STNA---ATVGELA-S-EAVGLKFYLNETFSTLILDKITAWASHFNAWPSTKPIVTHAKSQ------------------- 135 (344)
T ss_pred CCCH---HHHHHHH-h-ccCeEEEEECCCCCCCccchHHHHHHHHHhcccCCCeEEehhhH-------------------
Confidence 4333 2344443 2 357889887542111 1222222222333444577778887653
Q ss_pred cccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCcee
Q 014320 258 GHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKY 337 (427)
Q Consensus 258 ~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~ 337 (427)
.+.+++.+++.+|+++|++|+++.++++.++++|+.|++|++++|||||+++++.+.. ..+
T Consensus 136 -------------~~~~~l~la~~~g~~lhi~HiSt~~~~~~i~~ak~~g~~vt~ev~phhL~l~~~~~~~------~~~ 196 (344)
T cd01316 136 -------------TLAAVLLLASLHNRSIHICHVSSKEEINLIRLAKARGLKVTCEVSPHHLFLSQDDLPR------GQY 196 (344)
T ss_pred -------------HHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHHHHHCCCcEEEEechHHeeccHHHhhc------CCc
Confidence 3445778888999999999999999999999999999999999999999999887632 368
Q ss_pred EEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHH
Q 014320 338 VMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVR 417 (427)
Q Consensus 338 ~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~ 417 (427)
+++||||++.||++||+++. .+++|+|||+||+.++|.. .++++|++|+|+.+|++|+ ++.++++++.++++
T Consensus 197 k~~PPLR~~~dr~aL~~~l~--~id~i~SDHaP~~~~~K~~-----~~a~~G~~g~e~~lpl~~~-~v~~~~i~l~~l~~ 268 (344)
T cd01316 197 EVRPFLPTREDQEALWENLD--YIDCFATDHAPHTLAEKTG-----NKPPPGFPGVETSLPLLLT-AVHEGRLTIEDIVD 268 (344)
T ss_pred eeCCCCcCHHHHHHHHHHHh--cCCEEEcCCCCCCHHHhcC-----CCCCCCcccHHHHHHHHHH-HHHcCCCCHHHHHH
Confidence 89999999999999999995 5999999999999887742 2889999999999999995 78888999999999
Q ss_pred HHchhhhcC
Q 014320 418 LTSTEWGRL 426 (427)
Q Consensus 418 ~~t~npA~~ 426 (427)
++|.||||+
T Consensus 269 ~~s~nPAk~ 277 (344)
T cd01316 269 RLHTNPKRI 277 (344)
T ss_pred HHHHhHHHH
Confidence 999999985
No 30
>cd01294 DHOase Dihydroorotase (DHOase) catalyzes the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in the pyrimidine biosynthesis. In contrast to the large polyfunctional CAD proteins of higher organisms, this group of DHOases is monofunctional and mainly dimeric.
Probab=100.00 E-value=3.4e-38 Score=302.75 Aligned_cols=284 Identities=17% Similarity=0.130 Sum_probs=212.7
Q ss_pred EeccccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHH-HHhccc-cceeceeccccC
Q 014320 103 VMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYE-KKAKNS-CMDYGFHMAITK 179 (427)
Q Consensus 103 v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~ 179 (427)
-+||+||+|+|+..+ +++.+++++++++| |+++||....+. ...+.+.... +...+. +.++.+++....
T Consensus 2 ~~Pg~iD~h~h~~~~-------~~~~~~~~aa~~gG-Ttvv~mpnt~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 73 (335)
T cd01294 2 TIPRPDDMHLHLRDG-------AMLKLVLPYTARGF-SRAIVMPNLKPPVTTTADALAYRERILAADPGPNFTPLMTLYL 73 (335)
T ss_pred cCCCcceeEecCCCc-------hHHHHHHHHHHhCC-CEEEECCCCCCCCCCHHHHHHHHHHHHhcCCCCcEEEEEEEec
Confidence 379999999998753 78889999999999 999999754332 2333333333 333333 455554433311
Q ss_pred CChhhHHHHHHHHHHcCCCeEEEEEec----CCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCC
Q 014320 180 WDEVVSDEMEVMVKEKGINSFKFFMAY----KGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITG 255 (427)
Q Consensus 180 ~~~~~~~~~~~l~~~~g~~~ik~~~~~----~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~ 255 (427)
......++++++.+..|+.++|+|+.. .+....+.+.+.++++.+++.|+++.+|+|+.....
T Consensus 74 ~~~~~~~el~~~~~~~G~~g~Klf~~~~~~~~~~~~~d~~~l~~~~e~~~~~g~~V~vHaE~~~l~~------------- 140 (335)
T cd01294 74 TENTTPEELREAKKKGGIRGVKLYPAGATTNSQGGVTDLEKIYPVLEAMQKLGMPLLVHGEVPDFKI------------- 140 (335)
T ss_pred cCCCCHHHHHHHHHhCCceEEEEecCCCccCCCCCcCCHHHHHHHHHHHHHcCCeEEEecCCCcccc-------------
Confidence 122235677777634499999998642 111123568899999999999999999999865311
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHhc-CCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccC
Q 014320 256 PEGHALSRPPLLEGEATTRAIRLAEFV-NTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTA 334 (427)
Q Consensus 256 ~~~~~~~~p~~~e~~a~~~~~~~~~~~-g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~ 334 (427)
.+...+...+.+.+.++++. ++++|++|+++.++++.++++|+ +|++|+|||||+|+++.+.+.. .|
T Consensus 141 -------~~~~~e~~~~~~~~~lA~~~p~~~v~i~Hvst~~~~~~i~~ak~---~vt~Et~ph~L~l~~~~~~~~~--~g 208 (335)
T cd01294 141 -------DVLDREAKFIPVLEPLAQRFPKLKIVLEHITTADAVEYVKSCNE---NVAATITPHHLLLTRDDLLGGG--LN 208 (335)
T ss_pred -------cchhhHHHHHHHHHHHHHHcCCCeEEEecccHHHHHHHHHhCCC---CcEEEEchhHheeeHHHhcCCC--CC
Confidence 01112234456788888874 99999999999999999998876 8999999999999998774211 24
Q ss_pred ceeEEcCCCCCcccHHHHHHHHhcCCce-EEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHH
Q 014320 335 AKYVMSPPIRASGHNKALQAALATGILQ-LVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVT 413 (427)
Q Consensus 335 ~~~~~~pplr~~~~~~~l~~~l~~G~~~-~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~ 413 (427)
.++|++||||++.|+++||+++++|.++ +|+|||+||+.++|.. +++ .+|+.++++.+|+++ ..++ ++++++
T Consensus 209 ~~~k~~PPlR~~~d~~~L~~~l~~G~id~~i~SDHaP~~~~~K~~---~~g--~~Gi~~~~~~l~~~~-~~~~-~~l~l~ 281 (335)
T cd01294 209 PHLYCKPVAKRPEDREALRKAATSGHPKFFLGSDSAPHPKSNKES---SCG--CAGIFSAPIALPYLA-EVFE-EHNALD 281 (335)
T ss_pred CCeEEcCCCCCHHHHHHHHHHHHcCCCCeEEECCCCCCCCccccC---CCC--CccccCHHHHHHHHH-HHHh-ccCCHH
Confidence 7899999999999999999999999999 5999999999888742 333 348888888999998 5555 589999
Q ss_pred HHHHHHchhhhcC
Q 014320 414 DYVRLTSTEWGRL 426 (427)
Q Consensus 414 ~~v~~~t~npA~~ 426 (427)
++++++|.||||+
T Consensus 282 ~~v~~~s~nPA~i 294 (335)
T cd01294 282 KLEAFASDNGPNF 294 (335)
T ss_pred HHHHHHHhHHHHH
Confidence 9999999999996
No 31
>PRK09061 D-glutamate deacylase; Validated
Probab=100.00 E-value=2.2e-37 Score=310.88 Aligned_cols=330 Identities=16% Similarity=0.166 Sum_probs=249.3
Q ss_pred CccEEEECcEEEcCCCc--eeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHH
Q 014320 52 SSKILIKGGTVVNAHHQ--QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFS 129 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~~--~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~ 129 (427)
+.+++|+|++|+++.+. ..++|+|+||+|++|++.. +.+.++||++|++|+|||||+|+|...+ +
T Consensus 18 ~~~~li~~~~vid~~~~~~~~~~v~I~~G~I~~ig~~~--~~~~~viD~~g~~v~PG~ID~H~H~~~~--~--------- 84 (509)
T PRK09061 18 PYDLVIRNGRVVDPETGLDAVRDVGIKGGKIAAVGTAA--IEGDRTIDATGLVVAPGFIDLHAHGQSV--A--------- 84 (509)
T ss_pred cCCEEEECcEEEeCCCCeeccceEEEECCEEEEecCCC--CCCCeEEeCCCCEEecCeEeeeeCCCCC--c---------
Confidence 45689999999997663 3479999999999998753 2356899999999999999999997654 2
Q ss_pred HHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceecccc-------C-------------------C---
Q 014320 130 GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAIT-------K-------------------W--- 180 (427)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-------------------~--- 180 (427)
..+.++.+||||++++.. ......+.++...+. ...++++++.+.. . +
T Consensus 85 ~~~~~~~~GvTtvv~~~~-~~~p~~~~~~~~~~~--~~~vn~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (509)
T PRK09061 85 AYRMQAFDGVTTALELEA-GVLPVARWYAEQAGE--GRPLNYGASVGWTPARIAVLTGPQAEGTIADFGKALGDPRWQER 161 (509)
T ss_pred cchhhccCCceeEEeecc-CCCCHHHHHHHHHhc--CCcceeehhcCcHHHHHHHhCCcccccccccccccccccccccC
Confidence 145678999999999731 111232223222221 2235655433221 1 1
Q ss_pred --ChhhHHHHHHHHH---HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCC
Q 014320 181 --DEVVSDEMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITG 255 (427)
Q Consensus 181 --~~~~~~~~~~l~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~ 255 (427)
+.+.++++.++.+ +.|+.+++.+..+. +..+.+++.++++.|+++|.++.+|+++....
T Consensus 162 ~~t~~el~~m~~ll~~al~~Ga~gis~~~~y~--p~~~~~eL~~l~~~A~~~g~~v~~H~e~~~~~-------------- 225 (509)
T PRK09061 162 AATPAELAEILELLEQGLDEGALGIGIGAGYA--PGTGHKEYLELARLAARAGVPTYTHVRYLSNV-------------- 225 (509)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCEEecCCccC--CCCCHHHHHHHHHHHHHcCCEEEEEecCcccC--------------
Confidence 1344566666664 47999998765543 34589999999999999999999999875421
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCC------HHHHHHHHHHhhcCCCEEEecCccc--------eee
Q 014320 256 PEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS------MDAMEEIAKARKAGQRVIGEPVVSG--------LVL 321 (427)
Q Consensus 256 ~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~------~~~~~~i~~~~~~G~~v~~~~~p~~--------l~~ 321 (427)
....|..++.+.++++++.|++++++|+++ ...++.+++++++|++|++++|||+ +++
T Consensus 226 --------~~~~e~~av~~~i~lA~~~G~rv~IsHlss~g~~~~~~~le~I~~Ar~~Gi~Vt~e~~P~~~~~t~~~~~~l 297 (509)
T PRK09061 226 --------DPRSSVDAYQELIAAAAETGAHMHICHVNSTSLRDIDRCLALVEKAQAQGLDVTTEAYPYGAGSTVVGAAFF 297 (509)
T ss_pred --------CchhHHHHHHHHHHHHHHhCCCEEEEeeccCCcccHHHHHHHHHHHHHcCCcEEEEecCcchhhhhhccccc
Confidence 122356788999999999999999999998 7889999999999999999999999 777
Q ss_pred CcccccCCCcccCceeEE---cCCCCC-------------------------cccHHHHHHHHhcCCceEEecCCCCCCh
Q 014320 322 DDSWLWHSDFVTAAKYVM---SPPIRA-------------------------SGHNKALQAALATGILQLVGTDHCAFNS 373 (427)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~---~pplr~-------------------------~~~~~~l~~~l~~G~~~~lgSD~~p~~~ 373 (427)
+++...+.+.. ....++ +||||+ +.+++.+++.+..+.+ +++|||.|+.+
T Consensus 298 ~~~~~~~~~~~-~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~p~~-~i~sD~~p~~~ 375 (509)
T PRK09061 298 DPGWLERMGLG-YGSLQWVETGERLLTREELAKLRANDPGGLVLIHFLDEDNPRDRALLDRSVLFPGA-AIASDAMPWTW 375 (509)
T ss_pred CHHHHHHhCCC-HHHheehhcccccCCHHHHHHHhccCCCCeEEEEeccCCCCccchhHHHHhCCCCc-eEecCCccccc
Confidence 55443221100 011256 899998 6678999999999988 99999999998
Q ss_pred hhhhcCCCCCccCCCCCchhh------HhHHHHHHHHHhc-CCCCHHHHHHHHchhhhcC
Q 014320 374 TQKAFGIDDFRKIPNGVNGIE------ERMHLVWDTMVES-GQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 374 ~~~~~~~~~~~~~~~G~~~~e------~~l~~~~~~~~~~-~~l~l~~~v~~~t~npA~~ 426 (427)
..|. .+|..++.|+.+.+ ..++.++..++.. +.+|++++++++|.|||++
T Consensus 376 ~~~~---~~~~~~~~~~~~~~~h~r~~~~~~~~l~~~v~~~~~isl~~ai~~~T~~pA~~ 432 (509)
T PRK09061 376 SDGT---VYEGDAWPLPEDAVSHPRSAGTFARFLREYVRERKALSLLEAIRKCTLMPAQI 432 (509)
T ss_pred cccc---cccccccccccCCCCCchhhcchHHHHHHHHhhcccCCHHHHHHHHHHHHHHH
Confidence 8885 48889999998887 8888888767665 4699999999999999984
No 32
>cd01297 D-aminoacylase D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics.
Probab=100.00 E-value=1.5e-34 Score=285.40 Aligned_cols=296 Identities=23% Similarity=0.250 Sum_probs=217.2
Q ss_pred cEEEECcEEEcCCC--ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHH
Q 014320 54 KILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQ 131 (427)
Q Consensus 54 ~~~i~~~~i~~~~~--~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~ 131 (427)
|++|+|++|+++.+ ...++|.|+||||++|++... +.+.++||++|++|+|||||+|+|+..+ ... + ...
T Consensus 1 d~~i~n~~v~~~~~~~~~~~~i~I~~g~I~~i~~~~~-~~~~~~iD~~G~~v~PG~iD~H~H~~~~--~~~--~---~~~ 72 (415)
T cd01297 1 DLVIRNGTVVDGTGAPPFTADVGIRDGRIAAIGPILS-TSAREVIDAAGLVVAPGFIDVHTHYDGQ--VFW--D---PDL 72 (415)
T ss_pred CEEEECCEEECCCCCccccceEEEECCEEEEEecCCC-CCCCeEEECCCCEEccCEeeeeecCCcc--ccc--C---cch
Confidence 47899999999865 457899999999999987543 2346899999999999999999999875 211 1 236
Q ss_pred HHHHcCCceEEecCcCC---CCCcH------H-----------------HHHHHHHHHh-cc-ccceec---eecccc--
Q 014320 132 AAALAGGTTMHIDFVIP---INGSL------T-----------------AGFEAYEKKA-KN-SCMDYG---FHMAIT-- 178 (427)
Q Consensus 132 ~~~l~~GvTtv~d~~~~---~~~~~------~-----------------~~~~~~~~~~-~~-~~~~~~---~~~~~~-- 178 (427)
+.++.+||||++++... ..... . +.++.+.+.. .+ ..+++. +++...
T Consensus 73 ~~a~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~l~~~ 152 (415)
T cd01297 73 RPSSRQGVTTVVLGNCGVSPAPANPDDLARLIMLMEGLVALGEGLPWGWATFAEYLDALEARPPAVNVAALVGHAALRRA 152 (415)
T ss_pred hhHHhCcEEEEEeccccCccCCCChhhhhhhhhhhhcccccccccCCCCCCHHHHHHHHHhcCCCcCeeeccCcHHHHHH
Confidence 77899999999997431 11100 0 3334444444 22 367776 444333
Q ss_pred -------CCChhhHHHHHHHHH---HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHH
Q 014320 179 -------KWDEVVSDEMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRM 248 (427)
Q Consensus 179 -------~~~~~~~~~~~~l~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l 248 (427)
..+++.++++.++++ +.|+.++|.++.+......+++++.++++.++++|.++.+|+++.+.
T Consensus 153 ~~g~~~~~~~~~~~~~~~~l~~~al~~Ga~g~~~~~~y~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~-------- 224 (415)
T cd01297 153 VMGLDAREATEEELAKMRELLREALEAGALGISTGLAYAPRLYAGTAELVALARVAARYGGVYQTHVRYEGD-------- 224 (415)
T ss_pred HhCcCCCCCCHHHHHHHHHHHHHHHHCCCeEEEcccccCCcccCCHHHHHHHHHHHHHcCCEEEEEECcccc--------
Confidence 124455677777753 47999999887654223578999999999999999999999987642
Q ss_pred HHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHH---------HHHHHHHhhcCCCEEEecCccce
Q 014320 249 IELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDA---------MEEIAKARKAGQRVIGEPVVSGL 319 (427)
Q Consensus 249 ~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~---------~~~i~~~~~~G~~v~~~~~p~~l 319 (427)
.|..++.+.+++++..++|++++|+++... ++.+++++++|++|++++|||++
T Consensus 225 ------------------~e~~av~~~~~~a~~~g~r~~i~H~ss~~~~~~~~~~~~l~~i~~a~~~G~~v~~e~~p~~~ 286 (415)
T cd01297 225 ------------------SILEALDELLRLGRETGRPVHISHLKSAGAPNWGKIDRLLALIEAARAEGLQVTADVYPYGA 286 (415)
T ss_pred ------------------cHHHHHHHHHHHHHHhCCCEEEEEEecCCCcccchHHHHHHHHHHHHHhCCcEEEEeCCCCC
Confidence 145788999999999999999999998877 89999999999999999999766
Q ss_pred eeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHH
Q 014320 320 VLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHL 399 (427)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~ 399 (427)
++ ...++++++. .+++++|||+|+. + +.+. ..+ .++.
T Consensus 287 ~~---------------------------~~~~~~l~~~-~~~~i~SDh~~~~---~-----~~~~----~~~---~~~~ 323 (415)
T cd01297 287 GS---------------------------EDDVRRIMAH-PVVMGGSDGGALG---K-----PHPR----SYG---DFTR 323 (415)
T ss_pred Cc---------------------------HHHHHHHHcC-CCceeeeCCCcCC---C-----CCcc----hhC---CHHH
Confidence 43 1123344444 8999999999964 1 1111 111 1666
Q ss_pred HHHHHHhcC-CCCHHHHHHHHchhhhcC
Q 014320 400 VWDTMVESG-QISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 400 ~~~~~~~~~-~l~l~~~v~~~t~npA~~ 426 (427)
++..++..+ .++++++++++|.|||++
T Consensus 324 ~l~~~~~~~~~~~~~~~~~~~t~~pA~~ 351 (415)
T cd01297 324 VLGHYVRERKLLSLEEAVRKMTGLPARV 351 (415)
T ss_pred HHHHHhcccCCCCHHHHHHHHHHHHHHH
Confidence 775555444 599999999999999985
No 33
>TIGR00856 pyrC_dimer dihydroorotase, homodimeric type. This homodimeric form of dihydroorotase is less common in microbial genomes than a related dihydroorotase that appears in a complex with aspartyltranscarbamoylase or as a homologous domain in multifunctional proteins of pyrimidine biosynthesis in higher eukaryotes.
Probab=100.00 E-value=3.7e-34 Score=273.03 Aligned_cols=284 Identities=14% Similarity=0.117 Sum_probs=211.6
Q ss_pred EEeccccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhc-cc--cceeceeccc
Q 014320 102 FVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NS--CMDYGFHMAI 177 (427)
Q Consensus 102 ~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~--~~~~~~~~~~ 177 (427)
+.+|---|+|+|+.+. .+.....-+...|||++++|....+. ...+.++.+.+... .. .+++.+++.+
T Consensus 2 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~vt~vv~mPnt~P~~~~~e~~~~~~~~~~~~s~~~vDf~~~~~v 73 (341)
T TIGR00856 2 LTIRRPDDWHLHLRDG--------AMLKAVLPYTSEIFSRAIVMPNLAPPVTTVEAAVAYRERILDAVPAGHDFTPLMTL 73 (341)
T ss_pred ceecCccceeeeccCc--------hHHHHHHHHHHhhcCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcceEEEEEE
Confidence 4577788999999885 33334445677789999999754433 23455555555443 33 3578777766
Q ss_pred cCCChhhHHHHHHHHHHcCCCeEEEEEecCC----CccCCHHHHHHHHHHHHHcCCcEEEecCChh-hHHHHHHHHHHcC
Q 014320 178 TKWDEVVSDEMEVMVKEKGINSFKFFMAYKG----SFMINDELLIEGFKRCKSLGALAMVHAENGD-AVFEGQKRMIELG 252 (427)
Q Consensus 178 ~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~----~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~-~~~~~~~~l~~~G 252 (427)
....+...++++++.+..|+.++|+|+...+ ....+++.+.++++.+++.|+++.+|+|+.. .+...
T Consensus 74 ~~~~~~~~~Ei~~l~~~~Gv~g~Klf~~~~~~~~~~~v~dd~~l~~~~e~~~e~g~~v~vHaEd~~~~i~~~-------- 145 (341)
T TIGR00856 74 YLTDSLTPEELERAKNEGVVRAVKLYPAGATTNSSHGVTDIDAIMPVLEAMEKIGLPLLLHGEVTHGDIDIF-------- 145 (341)
T ss_pred ECCCCCCHHHHHHHHHcCCeEEEEEccCCcccCCCcCCCCHHHHHHHHHHHHHcCCeEEEeecCCCCCcccc--------
Confidence 4433335677888774449999999975321 1123558999999999999999999998863 11000
Q ss_pred CCCcccccccCCHHHHHHHHHHHH-HHHH-hcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCC
Q 014320 253 ITGPEGHALSRPPLLEGEATTRAI-RLAE-FVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSD 330 (427)
Q Consensus 253 ~~~~~~~~~~~p~~~e~~a~~~~~-~~~~-~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~ 330 (427)
..|..++.+.+ .++. ..+++++++|+++.++++.+++++. .|++|+|||||+++++.+...+
T Consensus 146 -------------~~e~~a~~~~i~~lA~~~~~~~~~i~H~st~~~~~~i~~a~~---~vt~E~~ph~L~l~~~~~~~~~ 209 (341)
T TIGR00856 146 -------------DREARFIESVLEPLRQRFPALKVVLEHITTKDAIDYVEDGNN---RLAATITPQHLMFTRNDLLGGG 209 (341)
T ss_pred -------------cchhhhhHHHHHHHHHHccCCeEEEEecCcHHHHHHHHHcCC---CEEEEEcHHHHhccHHHHhccC
Confidence 01233344333 4444 4589999999999999999988864 3999999999999998874311
Q ss_pred cccCceeEEcCCCCCcccHHHHHHHHhcCCce-EEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCC
Q 014320 331 FVTAAKYVMSPPIRASGHNKALQAALATGILQ-LVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQ 409 (427)
Q Consensus 331 ~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~-~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~ 409 (427)
+ +..++++||||++.|+++||+++++|.++ +|+|||+||+.++|.. +.+++|++|+|+.+|+++. .. ++.
T Consensus 210 ~--~~~~k~~PPlR~~~d~~aL~~~l~~G~id~~i~SDHaP~~~~~K~~-----~~~~~G~~g~e~~l~~~~~-~~-~~~ 280 (341)
T TIGR00856 210 V--NPHLYCLPILKRNIHQQALLELAASGFPKFFLGTDSAPHARHRKES-----SCGCAGCFSAPTALPSYAE-VF-EEM 280 (341)
T ss_pred C--CCceEEeCCCCCHHHHHHHHHHHHcCCCCEEEeCCCCCCChhHcCC-----CCCCCCcccHHHHHHHHHH-HH-hcC
Confidence 2 46899999999999999999999999999 6999999999887742 3589999999999999884 34 447
Q ss_pred CCHHHHHHHHchhhhcC
Q 014320 410 ISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 410 l~l~~~v~~~t~npA~~ 426 (427)
++++++++++|.||||+
T Consensus 281 ~~l~~~v~~~s~nPAk~ 297 (341)
T TIGR00856 281 NALENLEAFCSDNGPQF 297 (341)
T ss_pred CCHHHHHHHHhHhHHHH
Confidence 99999999999999986
No 34
>PLN02599 dihydroorotase
Probab=100.00 E-value=2.1e-33 Score=268.03 Aligned_cols=286 Identities=16% Similarity=0.132 Sum_probs=210.3
Q ss_pred CEEeccccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhc-c--ccceeceecc
Q 014320 101 KFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-N--SCMDYGFHMA 176 (427)
Q Consensus 101 ~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~--~~~~~~~~~~ 176 (427)
.+.+|---|+|+|+.+. .+.....-..++|+|++++|.+..+. ...+.++.+++... . ..+++.+++.
T Consensus 22 ~~~~~~~~d~h~hlr~~--------~~~~~~~~~~~gg~t~~i~MPn~~Ppv~~~~~~~~~~~~~~~~~~~~vdf~~~~~ 93 (364)
T PLN02599 22 ELTITRPDDWHLHLRDG--------AKLAAVVPHSARHFGRAIVMPNLKPPVTTTARALAYRERIMKALPPGSSFEPLMT 93 (364)
T ss_pred eEEecCCcceeeEccCc--------HHHHhhhHHhcCCcCEEEECCCCCCCcCCHHHHHHHHHHHhhhcCCCcceEEEEE
Confidence 36799999999999885 23333455688999999999754333 45566666665553 3 3478887765
Q ss_pred ccCCChhhHHHHHHHHHHcCCC-eEEEEEecCC----CccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHc
Q 014320 177 ITKWDEVVSDEMEVMVKEKGIN-SFKFFMAYKG----SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIEL 251 (427)
Q Consensus 177 ~~~~~~~~~~~~~~l~~~~g~~-~ik~~~~~~~----~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~ 251 (427)
.........++++++. +.|+. ++|+|+...+ ....+.+.+..+++.+++.|+++.+|+|+.+.....
T Consensus 94 l~lt~~~~l~Ei~~~~-~~Gvv~gfKlyp~~~tt~s~~gv~d~~~l~~~le~~~e~G~~L~vH~E~~~~~~~~------- 165 (364)
T PLN02599 94 LYLTDNTTPEEIKAAK-ASGVVFAVKLYPAGATTNSQAGVTDLGKCLPVLEEMAEQGMPLLVHGEVTDPSVDI------- 165 (364)
T ss_pred EecCCCCCHHHHHHHH-HCCCcEEEEECcccCcCCCccccCCHHHHHHHHHHHHhcCCEEEEecCCCcccccc-------
Confidence 5222223467787775 78998 9999975321 112236899999999999999999999985431100
Q ss_pred CCCCcccccccCCHHHHHHHHHHHH--HHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCC
Q 014320 252 GITGPEGHALSRPPLLEGEATTRAI--RLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHS 329 (427)
Q Consensus 252 G~~~~~~~~~~~p~~~e~~a~~~~~--~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~ 329 (427)
...|...+.+.+ .+++..++++|++|+++.++++.++++++ + +|++++|||||+++++++...
T Consensus 166 -------------~~~E~~~i~r~l~~~la~~~g~kI~i~HiSt~~~ve~v~~ak~-~-~vtae~tpHhL~l~~~~~~~~ 230 (364)
T PLN02599 166 -------------FDREKVFIDTILAPLVQKLPQLKIVMEHITTMDAVEFVESCGD-G-NVAATVTPQHLLLNRNALFQG 230 (364)
T ss_pred -------------cccHHHHHHHHHHHHHHhccCCeEEEEecChHHHHHHHHhccC-C-CEEEEecHHHHhcCHHHHhcc
Confidence 001233456677 57778899999999999999999999884 4 899999999999998876422
Q ss_pred CcccCceeEEcCCCCCcccHHHHHHHHhcCCc-eEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcC
Q 014320 330 DFVTAAKYVMSPPIRASGHNKALQAALATGIL-QLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESG 408 (427)
Q Consensus 330 ~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~-~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~ 408 (427)
++ +..++++||+|++.||++||+++.+|.+ ++|||||+||+.+.|.. ....+|+...++.+|+++ ..+.+.
T Consensus 231 ~~--~~~~k~~PPlR~~~dr~aL~~al~~G~i~~~i~SDHaPh~~~~K~~-----~~g~~Gi~~~~~~l~~l~-~~~~~~ 302 (364)
T PLN02599 231 GL--QPHNYCLPVLKREIHREALVKAATSGSKKFFLGTDSAPHPKRAKEA-----SCGCAGIYSAPVALSLYA-KAFEEA 302 (364)
T ss_pred CC--CCCeEEECCCCCHHHHHHHHHHHHcCCCCEEEecCCCCCChHHhcC-----CCCCCCcccHHHHHHHHH-HHHHhc
Confidence 22 2569999999999999999999999996 89999999999877631 111234444444788765 344444
Q ss_pred CCCHHHHHHHHchhhhcC
Q 014320 409 QISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 409 ~l~l~~~v~~~t~npA~~ 426 (427)
+ +++++++++|.||||+
T Consensus 303 g-~l~~l~~~~S~npA~~ 319 (364)
T PLN02599 303 G-ALDKLEAFTSFNGPDF 319 (364)
T ss_pred C-CHHHHHHHHhHHHHHH
Confidence 4 9999999999999986
No 35
>PRK05451 dihydroorotase; Provisional
Probab=100.00 E-value=1.8e-32 Score=262.82 Aligned_cols=281 Identities=17% Similarity=0.158 Sum_probs=199.3
Q ss_pred EEeccccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhc-c--ccceeceeccc
Q 014320 102 FVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-N--SCMDYGFHMAI 177 (427)
Q Consensus 102 ~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~--~~~~~~~~~~~ 177 (427)
+-+|=-||+|+|+.+. ....++.++++ .++|+++||....+. ...+.++....... + ..+++.+++..
T Consensus 5 ~~~~~~~d~h~hl~~~----~~~~~~~~~~~----~~~t~~v~mPnt~P~~~~~~~l~~~~~~a~~~~~~~~d~~~~~~i 76 (345)
T PRK05451 5 LTIRRPDDWHLHLRDG----AMLKAVVPYTA----RQFGRAIVMPNLVPPVTTVAQALAYRERILAALPAGSNFEPLMTL 76 (345)
T ss_pred EEecCcceEEEecCCc----hHHHHHHHHHH----HhcCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCCcEEEEEEE
Confidence 5678899999999863 23335555444 469999998654222 33445544444332 2 23455554444
Q ss_pred cCCChhhHHHHHHHHHHcCC-CeEEEEEecCC----CccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcC
Q 014320 178 TKWDEVVSDEMEVMVKEKGI-NSFKFFMAYKG----SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELG 252 (427)
Q Consensus 178 ~~~~~~~~~~~~~l~~~~g~-~~ik~~~~~~~----~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G 252 (427)
........++++++. +.|+ .++|+|+...+ ....+++.+.++++.++++|+++.+|+|+.+.....
T Consensus 77 ~~~~~~~~~El~~~~-~~Gvv~g~Kl~~~~~~~~~~~~~~dd~~l~~~~e~~~~~g~~V~vHaE~~~~~~~~-------- 147 (345)
T PRK05451 77 YLTDNTDPDELERAK-ASGVVTAAKLYPAGATTNSDAGVTDIEKIYPVLEAMQKLGMPLLVHGEVTDPDIDI-------- 147 (345)
T ss_pred EeCCCCCHHHHHHHH-HCCCEEEEEEecccCccCCccCcCCHHHHHHHHHHHHHcCCEEEEecCCCCccccc--------
Confidence 332223457787776 6795 49999986421 112278899999999999999999999984331000
Q ss_pred CCCcccccccCCHHHHHHHHHHH-HHHHHhc-CCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCC
Q 014320 253 ITGPEGHALSRPPLLEGEATTRA-IRLAEFV-NTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSD 330 (427)
Q Consensus 253 ~~~~~~~~~~~p~~~e~~a~~~~-~~~~~~~-g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~ 330 (427)
...+..++.+. ..++... +++++++|+++.++++.++++ |.+|++|+|||||+++++.+...+
T Consensus 148 ------------~~~e~~~~~~~l~~lA~~~pg~~lhI~Hlst~~~~e~i~~a---~~~it~Et~ph~L~l~~~~~~~~~ 212 (345)
T PRK05451 148 ------------FDREAVFIDRVLEPLRRRFPKLKIVFEHITTKDAVDYVREA---NDNLAATITPHHLLINRNDMLVGG 212 (345)
T ss_pred ------------ccchHHHHHHHHHHHHHhcCCCcEEEEecCcHHHHHHHHhc---CCCEEEEecHHHHhcCHHHHhCCC
Confidence 00123344444 3477666 999999999999998888765 568999999999999988764222
Q ss_pred cccCceeEEcCCCCCcccHHHHHHHHhcCCce-EEecCCCCCChhhhhcCCCCCccCCCCCchhhH---hHHHHHHHHHh
Q 014320 331 FVTAAKYVMSPPIRASGHNKALQAALATGILQ-LVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEE---RMHLVWDTMVE 406 (427)
Q Consensus 331 ~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~-~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~---~l~~~~~~~~~ 406 (427)
.+..++++||||++.|+++||++|++|.++ +|||||+||+.++|. .++|.+|++. .++.++. +..
T Consensus 213 --~~~~~k~~PPLR~~~d~~aLw~~l~~G~Id~~i~SDHaP~~~~~K~--------~~~G~~gi~~~~~g~~~~~~-~~~ 281 (345)
T PRK05451 213 --IRPHLYCLPILKRETHRQALREAATSGNPKFFLGTDSAPHARHAKE--------SACGCAGIFSAPAALELYAE-VFE 281 (345)
T ss_pred --cCCCeEEeCCCCCHHHHHHHHHHHHcCCCCEEEeCCCCCCChHHhC--------CCCCCCchhhHHHHHHHHHH-HHH
Confidence 235799999999999999999999999999 899999999988773 2456666665 5577664 333
Q ss_pred cCCCCHHHHHHHHchhhhcC
Q 014320 407 SGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 407 ~~~l~l~~~v~~~t~npA~~ 426 (427)
++ .+++++++++|.||||+
T Consensus 282 ~~-~~l~~~v~~~s~nPAki 300 (345)
T PRK05451 282 EA-GALDKLEAFASLNGPDF 300 (345)
T ss_pred cC-CCHHHHHHHHhHHHHHH
Confidence 33 49999999999999986
No 36
>PRK15446 phosphonate metabolism protein PhnM; Provisional
Probab=100.00 E-value=2e-31 Score=259.16 Aligned_cols=315 Identities=17% Similarity=0.187 Sum_probs=218.1
Q ss_pred ccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccc-c---CcCCC--CChhh
Q 014320 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLA-M---EFMGS--ETIDD 126 (427)
Q Consensus 53 ~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~-~---~~~g~--~~~e~ 126 (427)
.+++|+|++|++.+...+++|.|+||||++|++... ...++||++|++|||||||+|+|.. . +..+. ...++
T Consensus 2 ~~~~i~~~~v~~~~~~~~~~i~i~~g~I~~i~~~~~--~~~~~iDa~g~~v~PG~ID~H~h~~~~~~~p~~~~~~~~~~~ 79 (383)
T PRK15446 2 MEMILSNARLVLPDEVVDGSLLIEDGRIAAIDPGAS--ALPGAIDAEGDYLLPGLVDLHTDNLEKHLAPRPGVDWPADAA 79 (383)
T ss_pred ccEEEECcEEEcCCCceeeeEEEECCEEEEecCCCC--CCCceEeCCCCEEEeCeEEcccCCcccccCCCCCCccchHHH
Confidence 468999999999776668999999999999998543 2457899999999999999999543 2 32121 22378
Q ss_pred HHHHHHHHHcCCceEEecCcCCC--C--C----cHH-HHHHHHH--HHhccccceeceeccccCCChhhHHHHHHHHHHc
Q 014320 127 FFSGQAAALAGGTTMHIDFVIPI--N--G----SLT-AGFEAYE--KKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEK 195 (427)
Q Consensus 127 ~~~~~~~~l~~GvTtv~d~~~~~--~--~----~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 195 (427)
+.++.++++++||||++|+.... + . ... ...+... ....++.++|++|+....++++.++++.+++ +.
T Consensus 80 ~~~~~~~a~~gG~Tt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vD~~~h~~~~~~~~~~~~~l~~~~-~~ 158 (383)
T PRK15446 80 LAAHDAQLAAAGITTVFDALSVGDEEDGGLRSRDLARKLIDAIEEARARGLLRADHRLHLRCELTNPDALELFEALL-AH 158 (383)
T ss_pred HHHHHHHHHhCCccEeeeeeEeccCCCCCcccHHHHHHHHHHHHHhhhcCchhccceeEEEEEecCcchHHHHHHHh-cC
Confidence 99999999999999999974211 1 1 122 2223333 2335688999999988776777788899888 78
Q ss_pred CCCeEEEEEecC-CCc-cCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHH
Q 014320 196 GINSFKFFMAYK-GSF-MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATT 273 (427)
Q Consensus 196 g~~~ik~~~~~~-~~~-~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~ 273 (427)
|+..+|.|++.. +.. ....+.+.... +++.| .+|+|+.+.+.... . +|...+.+.++
T Consensus 159 g~~~~k~fm~~~p~~~~~~~~~~~~~~~--~~~~g---~~~~e~~~~~~~~~---~-------------~~~~~~~e~i~ 217 (383)
T PRK15446 159 PRVDLVSLMDHTPGQRQFRDLEKYREYY--AGKYG---LSDEEFDAFVEERI---A-------------LSARYAPPNRR 217 (383)
T ss_pred CCcCEEEEeCCCCccccccCHHHHHHHH--HhhcC---CCHHHHHHHHHHHH---H-------------hHhhcCHHHHH
Confidence 999999999875 322 22344444444 44677 67988876654221 1 25555678899
Q ss_pred HHHHHHHhcCCCEEEEcCC-CHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeE-EcC-CCCC--ccc
Q 014320 274 RAIRLAEFVNTPLYVVHVM-SMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYV-MSP-PIRA--SGH 348 (427)
Q Consensus 274 ~~~~~~~~~g~~~~i~H~~-~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~-~~p-plr~--~~~ 348 (427)
++++.+++.|+++ .+|.. .. +.++++++.|+.++- .|. +.+.... -.+.|.... ..| |+|. ...
T Consensus 218 ~~v~~A~~~g~~v-~sH~~~~~---~~i~~a~~~Gv~~~e--~~~----~~e~~~~-~~~~g~~v~~~~p~~~r~~~~~~ 286 (383)
T PRK15446 218 AIAALARARGIPL-ASHDDDTP---EHVAEAHALGVAIAE--FPT----TLEAARA-ARALGMSVLMGAPNVVRGGSHSG 286 (383)
T ss_pred HHHHHHHHCCCce-eecCCCCH---HHHHHHHHcCCceee--CCC----cHHHHHH-HHHCCCEEEeCCcccccCCcccc
Confidence 9999999999987 88873 43 458888889988763 121 1111100 000112222 223 4665 456
Q ss_pred HHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 349 NKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 349 ~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+..+|+++++|+++++||||.|.+. ++.++ ......+++++++++++|.|||++
T Consensus 287 ~~~~~~~~~~Gv~~~lgSD~~p~~~-----------------------~~~~~-~~~~~~gls~~~al~~~T~npA~~ 340 (383)
T PRK15446 287 NVSALDLAAAGLLDILSSDYYPASL-----------------------LDAAF-RLADDGGLDLPQAVALVTANPARA 340 (383)
T ss_pred hHhHHHHHHCCCcEEEEcCCChhhH-----------------------HHHHH-HHHHhcCCCHHHHHHHHhHHHHHH
Confidence 8899999999999999999976431 11222 233456799999999999999985
No 37
>TIGR02318 phosphono_phnM phosphonate metabolism protein PhnM. This family consists of proteins from in the PhnM family. PhnM is a a protein associated with phosphonate utilization in a number of bacterial species. In Pseudomonas stutzeri WM88, a protein that is part of a system for the oxidation of phosphites (another form of reduced phosphorous compound) scores between trusted and noise cutoffs.
Probab=99.97 E-value=2.1e-30 Score=251.22 Aligned_cols=312 Identities=16% Similarity=0.166 Sum_probs=216.0
Q ss_pred EEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEecccccccccccc------CcCCCC--ChhhH
Q 014320 56 LIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAM------EFMGSE--TIDDF 127 (427)
Q Consensus 56 ~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~------~~~g~~--~~e~~ 127 (427)
+|+|++|+++++....+|.|+||||++|++... ...++||++|++|+|||||+|+|... + +.. ..+.+
T Consensus 1 ~i~~~~vv~~~~~~~~~i~i~dg~I~~i~~~~~--~~~~~iD~~G~~v~PGlID~H~h~~e~~~~prp--~~~~~~~~~~ 76 (376)
T TIGR02318 1 VLSNARLVLEDEVVEGSVVIEDGAIADIGEGPV--ALAEAIDGEGDLLLPGLIDLHTDNLERHMSPRP--GVDWPIDAAI 76 (376)
T ss_pred CEeCeEEECCCceEeeeEEEECCEEEEecCCCC--CCCceEeCCCCEEeccEEEcccCccccCcCCCC--CCCcchHHHH
Confidence 489999999887656799999999999987432 23568999999999999999999877 4 331 23788
Q ss_pred HHHHHHHHcCCceEEecCcCCC----CCcHHHHHHHH----HHHhcc--ccceeceeccccCCChhhHHHHHHHHHHcCC
Q 014320 128 FSGQAAALAGGTTMHIDFVIPI----NGSLTAGFEAY----EKKAKN--SCMDYGFHMAITKWDEVVSDEMEVMVKEKGI 197 (427)
Q Consensus 128 ~~~~~~~l~~GvTtv~d~~~~~----~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 197 (427)
.++.++++++||||++|+.... .....+.++.+ .....+ ..+++++|++......+..++++++. ..|+
T Consensus 77 ~~~~~~~aa~GiTT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~h~~~e~~~~~~~~~l~~~~-~~g~ 155 (376)
T TIGR02318 77 VEHDKQLAAAGITTVFDALALGDTESGGRRPDNLRRMIDAISEARDRGLLRADHRLHLRCELPNEEVLPELEELI-DDPR 155 (376)
T ss_pred HHHHHHHhhCCcceEEeeEEecccCCcCccHHHHHHHHHHHHHhhhcCchhhhceeEEEEEecCccHHHHHHHHh-cCCC
Confidence 8999999999999999995221 11223333332 333334 78899999887655666688888887 7899
Q ss_pred CeEEEEEecCCC--ccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHH
Q 014320 198 NSFKFFMAYKGS--FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRA 275 (427)
Q Consensus 198 ~~ik~~~~~~~~--~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~ 275 (427)
.++|.|++..+. +..+.+.+.+.+.. +.| .+|+|..+.+... ..+.+.. ..+.+.++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g---~~~~e~~~~~~~~---~~~~~~~-------------~~e~i~~~ 214 (376)
T TIGR02318 156 VDLISLMDHTPGQRQFRDLEKYREYYRG--KRG---LSDDEFDEIVEER---IARRAEY-------------GLANRSEI 214 (376)
T ss_pred cCEEEEeCCCCCcccccCHHHHHHHHHh--hcC---CCHHHHHHHHHHH---HHHHhhc-------------cHHHHHHH
Confidence 999999987543 24567666666644 566 6798887665422 2222211 14778899
Q ss_pred HHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCce-eEEcC-CCCCccc--HHH
Q 014320 276 IRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAK-YVMSP-PIRASGH--NKA 351 (427)
Q Consensus 276 ~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~-~~~~p-plr~~~~--~~~ 351 (427)
++++++.|+++ .+|.... .+.++++++.|+.+.- .| .+.+.... -.+.|.. .++.| |+|...+ +..
T Consensus 215 v~~A~~~G~~v-~sH~~~~--~e~i~~a~~~Gv~~~E--~~----~t~e~a~~-~~~~G~~v~~~~p~~~r~~~~~~~~~ 284 (376)
T TIGR02318 215 AALARARGIPL-ASHDDDT--PEHVAEAHDLGVTISE--FP----TTLEAAKE-ARSLGMQILMGAPNIVRGGSHSGNLS 284 (376)
T ss_pred HHHHHHCCCeE-EEecCCC--HHHHHHHHHCCCChhc--cC----CCHHHHHH-HHHcCCeEEECCccccccccccchHH
Confidence 99999999987 8887321 2457888888874332 11 11111100 0111233 44445 6777666 789
Q ss_pred HHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 352 LQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 352 l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+|++++.|++++++|||.|.. .++.++.......+++++++++++|.|||++
T Consensus 285 l~~~~~~G~~~~l~SD~~p~~-----------------------~l~~~~~~~~~~~gl~~~~al~~~T~npA~~ 336 (376)
T TIGR02318 285 ARELAHEGLLDVLASDYVPAS-----------------------LLLAAFQLADDVEGIPLPQAVKMVTKNPARA 336 (376)
T ss_pred HHHHHHCCCcEEEEcCCCcHH-----------------------HHHHHHHHHHhhcCCCHHHHHHHHhHHHHHH
Confidence 999999999999999997742 1223332223334699999999999999985
No 38
>PRK15493 5-methylthioadenosine/S-adenosylhomocysteine deaminase; Provisional
Probab=99.97 E-value=5.1e-30 Score=254.30 Aligned_cols=313 Identities=19% Similarity=0.221 Sum_probs=202.8
Q ss_pred cEEEECcEEEcCCC----ceeeeEEEeCCeEEEeeCCCC--CCCCceEEeCCCCEEeccccccccccccCcCC-------
Q 014320 54 KILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNIN--VGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG------- 120 (427)
Q Consensus 54 ~~~i~~~~i~~~~~----~~~~~i~i~~g~I~~vg~~~~--~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g------- 120 (427)
+++|+|++|++.+. .++++|+|+||+|++||+... .+++.++||++|++|||||||+|+|+.+....
T Consensus 2 ~~li~~~~v~t~~~~~~~~~~g~V~i~~g~I~~vg~~~~~~~~~~~~viD~~g~~i~PGlVn~H~H~~~~~~rg~~~~~~ 81 (435)
T PRK15493 2 KTTYVNATIVTMNEQNEVIENGYIIVENDQIIDVNSGEFASDFEVDEVIDMKGKWVLPGLVNTHTHVVMSLLRGIGDDML 81 (435)
T ss_pred eEEEEccEEEEeCCCCcEecCcEEEEECCEEEEEcCccccccCCCCeEEeCCCCEEccceeecccCccchhhhccCCCCC
Confidence 47899999998663 357899999999999998532 22357899999999999999999999764211
Q ss_pred --------------CCChhhHHH----HHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceec-cccCCC
Q 014320 121 --------------SETIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHM-AITKWD 181 (427)
Q Consensus 121 --------------~~~~e~~~~----~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 181 (427)
..+++..+. +...++++||||+.|+............+...+.+.|..+...... ......
T Consensus 82 l~~wl~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~a~~~~GiR~~~~~~~~~~~~~~~~ 161 (435)
T PRK15493 82 LQPWLETRIWPLESQFTPELAVASTELGLLEMVKSGTTSFSDMFNPIGVDQDAIMETVSRSGMRAAVSRTLFSFGTKEDE 161 (435)
T ss_pred HHHHHHhchhhchhcCCHHHHHHHHHHHHHHHHhCCccEEEccccccccCHHHHHHHHHHcCCcEEEeeeecCCCCCccH
Confidence 012233222 3455699999999998643222234455666777777544432221 111112
Q ss_pred hhhHHHHHHHHHH-cC-CCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcCCCCccc
Q 014320 182 EVVSDEMEVMVKE-KG-INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPEG 258 (427)
Q Consensus 182 ~~~~~~~~~l~~~-~g-~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~~ 258 (427)
.+.+++..+++++ .+ ...++..+.+++++.++++.++++++.|+++|+++++|+ |+..++..+.+. .|..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~t~s~e~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~~~---~g~~---- 234 (435)
T PRK15493 162 KKAIEEAEKYVKRYYNESGMLTTMVAPHSPYTCSTELLEECARIAVENQTMVHIHLSETEREVRDIEAQ---YGKR---- 234 (435)
T ss_pred HHHHHHHHHHHHHhcCCCCCeEEEEeCCCCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHH---hCCC----
Confidence 2333444444432 22 356889999999999999999999999999999999997 776555443321 1210
Q ss_pred ccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeE
Q 014320 259 HALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYV 338 (427)
Q Consensus 259 ~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~ 338 (427)
| + +.+......+.++.+.|+...+. +.++.+++.|+.|+. ||...+. .+..
T Consensus 235 -----~-------~-~~l~~~Gll~~~~~~~H~~~l~~-~d~~~la~~g~~v~~--~P~sn~~-----------l~~g-- 285 (435)
T PRK15493 235 -----P-------V-EYAASCGLFKRPTVIAHGVVLND-NERAFLAEHDVRVAH--NPNSNLK-----------LGSG-- 285 (435)
T ss_pred -----H-------H-HHHHHcCCCCCCcEEEEeecCCH-HHHHHHHHcCCeEEE--ChHHHHH-----------HhcC--
Confidence 0 0 11111122345667888877664 567888899988775 7753221 1111
Q ss_pred EcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHh--cCCCCHHHHH
Q 014320 339 MSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVE--SGQISVTDYV 416 (427)
Q Consensus 339 ~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~--~~~l~l~~~v 416 (427)
.+| +.++++.|+.+++|||+.+.+...+.+ .+.+++.++.+.+. ...+++++++
T Consensus 286 -~~p---------~~~~~~~Gv~v~lGtD~~~~~~~~d~~--------------~~~~~a~~~~~~~~~~~~~~~~~~~l 341 (435)
T PRK15493 286 -IAN---------VKAMLEAGIKVGIATDSVASNNNLDMF--------------EEMRIATLLQKGIHQDATALPVETAL 341 (435)
T ss_pred -ccc---------HHHHHHCCCeEEEccCccccCCCcCHH--------------HHHHHHHHHHhhccCCCCcCCHHHHH
Confidence 244 455899999999999975432222211 24556555544322 3479999999
Q ss_pred HHHchhhhcC
Q 014320 417 RLTSTEWGRL 426 (427)
Q Consensus 417 ~~~t~npA~~ 426 (427)
+++|.|||+.
T Consensus 342 ~~aT~~gA~~ 351 (435)
T PRK15493 342 TLATKGAAEV 351 (435)
T ss_pred HHHhHHHHHH
Confidence 9999999974
No 39
>PRK06687 chlorohydrolase; Validated
Probab=99.97 E-value=5.5e-30 Score=253.79 Aligned_cols=312 Identities=18% Similarity=0.201 Sum_probs=199.8
Q ss_pred EEEECcEEEcCCC----ceeeeEEEeCCeEEEeeCCCCC--CCCceEEeCCCCEEeccccccccccccCcCC--------
Q 014320 55 ILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNINV--GDDVKVLDATGKFVMPGGIDPHTHLAMEFMG-------- 120 (427)
Q Consensus 55 ~~i~~~~i~~~~~----~~~~~i~i~~g~I~~vg~~~~~--~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g-------- 120 (427)
++|+|++|++.+. .++++|+|+||+|++||+..+. +...++||++|++|+|||||+|+|+.+....
T Consensus 2 ~~~~n~~vvt~d~~~~~~~~g~VlV~~g~I~aVg~~~~~~~~~~~~viD~~g~~v~PGlIn~H~H~~~~~~rg~~~~~~~ 81 (419)
T PRK06687 2 KVFQHVNIVTCDQDFHVYLDGILAVKDSQIVYVGQDKPAFLEQAEQIIDYQGAWIMPGLVNCHTHSAMTGLRGIRDDSNL 81 (419)
T ss_pred cceEeeEEEEeCCCceEecCcEEEEECCEEEEecCcccccccccCeEEeCCCCEEccceeeeccCCCccccccccCCCCH
Confidence 4799999999775 2568999999999999986432 2346899999999999999999999876321
Q ss_pred -------------CCChhhHHH----HHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccccCCChh
Q 014320 121 -------------SETIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEV 183 (427)
Q Consensus 121 -------------~~~~e~~~~----~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (427)
..+++..+. +...++++||||+.|+...........++..++.+.+..+...+........++
T Consensus 82 ~~wl~~~~~~~~~~~~~~~~~~~~~~a~~e~l~~GvTTv~d~~~~~~~~~~~~~~a~~~~Gir~~~~~~~~~~~~~~~~~ 161 (419)
T PRK06687 82 HEWLNDYIWPAESEFTPDMTTNAVKEALTEMLQSGTTTFNDMYNPNGVDIQQIYQVVKTSKMRCYFSPTLFSSETETTAE 161 (419)
T ss_pred HHHHHhhhccccccCCHHHHHHHHHHHHHHHHhcCcceeehhhccccccHHHHHHHHHHhCCceEeccccccCCcccHHH
Confidence 012233333 234459999999999864322234556677777776654433222211122233
Q ss_pred hHHHHHHHHHH---cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcCCCCcccc
Q 014320 184 VSDEMEVMVKE---KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPEGH 259 (427)
Q Consensus 184 ~~~~~~~l~~~---~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~~~ 259 (427)
.+++..+++++ .+...++++++++.++.++++.++++++.|+++|+++++|+ |+..+.....+. .|..
T Consensus 162 ~~~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~i~~H~~e~~~e~~~~~~~---~g~~----- 233 (419)
T PRK06687 162 TISRTRSIIDEILKYKNPNFKVMVAPHSPYSCSRDLLEASLEMAKELNIPLHVHVAETKEESGIILKR---YGKR----- 233 (419)
T ss_pred HHHHHHHHHHHHhccCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHH---HCcC-----
Confidence 34455555432 23456899999999999999999999999999999999997 665444333221 1210
Q ss_pred cccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEE
Q 014320 260 ALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVM 339 (427)
Q Consensus 260 ~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~ 339 (427)
| + +.++.....+.++.+.|+...+. +.++++++.|+.++. ||..... .+. .
T Consensus 234 ----~-------~-~~l~~~g~l~~~~~~~H~~~~~~-~~~~~la~~g~~v~~--~P~sn~~-----------l~~---g 284 (419)
T PRK06687 234 ----P-------L-AFLEELGYLDHPSVFAHGVELNE-REIERLASSQVAIAH--NPISNLK-----------LAS---G 284 (419)
T ss_pred ----H-------H-HHHHHcCCCCCCeEEEEEecCCH-HHHHHHHHcCCeEEE--CcHHhhh-----------hcc---C
Confidence 0 0 11111122344567888877654 668888999988776 7752211 111 1
Q ss_pred cCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHh--cCCCCHHHHHH
Q 014320 340 SPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVE--SGQISVTDYVR 417 (427)
Q Consensus 340 ~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~--~~~l~l~~~v~ 417 (427)
.+| +.++++.|+.+++|||..+.+...+.+ .+.++...+.+... ...++++++++
T Consensus 285 ~~p---------~~~~~~~Gv~v~lGtD~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~l~ 341 (419)
T PRK06687 285 IAP---------IIQLQKAGVAVGIATDSVASNNNLDMF--------------EEGRTAALLQKMKSGDASQFPIETALK 341 (419)
T ss_pred CCc---------HHHHHHCCCeEEEeCCCCCCCCChhHH--------------HHHHHHHHHhccccCCCccCCHHHHHH
Confidence 244 455899999999999974432222111 12333333322111 12589999999
Q ss_pred HHchhhhcC
Q 014320 418 LTSTEWGRL 426 (427)
Q Consensus 418 ~~t~npA~~ 426 (427)
++|.|||+.
T Consensus 342 ~aT~~gA~~ 350 (419)
T PRK06687 342 VLTIEGAKA 350 (419)
T ss_pred HHhHHHHHH
Confidence 999999984
No 40
>PRK07228 N-ethylammeline chlorohydrolase; Provisional
Probab=99.97 E-value=1.2e-28 Score=246.31 Aligned_cols=311 Identities=21% Similarity=0.267 Sum_probs=195.7
Q ss_pred cEEEECcEEEcCCC---ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcC-CC--------
Q 014320 54 KILIKGGTVVNAHH---QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS-------- 121 (427)
Q Consensus 54 ~~~i~~~~i~~~~~---~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g~-------- 121 (427)
+++|+|++|+++++ .++++|+|+||+|++|++....+...++||++|++|||||||+|+|+.++.. +.
T Consensus 2 ~~~i~~~~vi~~~~~~~~~~g~V~I~dg~I~~vg~~~~~~~~~~vID~~G~~vlPGlId~H~H~~~~~~~g~~~~~~~~~ 81 (445)
T PRK07228 2 TILIKNAGIVTMNAKREIVDGDVLIEDDRIAAVGDRLDLEDYDDHIDATGKVVIPGLIQGHIHLCQTLFRGIADDLELLD 81 (445)
T ss_pred eEEEEccEEEecCCCcEecccEEEEECCEEEEecCCcccCcCCeEEeCCCCEEecCEEecccCCccccceeccCCCCHHH
Confidence 47999999999763 5689999999999999986543335789999999999999999999976521 11
Q ss_pred ------------CChhhHH----HHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceec-------ccc
Q 014320 122 ------------ETIDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHM-------AIT 178 (427)
Q Consensus 122 ------------~~~e~~~----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 178 (427)
.++++.+ .+...++++||||++|+.... .....++...+.+.+......+.. ...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~a~~~~~e~L~~GvTtv~d~~~~~--~~~~~~~a~~~~g~r~~~~~~~~~~~~~~p~~~~ 159 (445)
T PRK07228 82 WLKDRIWPLEAAHDAESMYYSALLGIGELIESGTTTIVDMESVH--HTDSAFEAAGESGIRAVLGKVMMDYGDDVPEGLQ 159 (445)
T ss_pred HHHhhhhhhhhhCCHHHHHHHHHHHHHHHHhcCceEEEcccccc--ChHHHHHHHHHcCCeEEEecceecCCcCCCcccc
Confidence 0112222 223456899999999986432 123455666666655322211110 001
Q ss_pred CCChhhHHHHHHHHHH-cCCC--eEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcCCC
Q 014320 179 KWDEVVSDEMEVMVKE-KGIN--SFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGIT 254 (427)
Q Consensus 179 ~~~~~~~~~~~~l~~~-~g~~--~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~ 254 (427)
...++.+++..++++. .|.. .+...+.++....++++.++++++.|+++|+++++|+ |+...+....+ ..|..
T Consensus 160 ~~~~~~l~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~~~~~---~~g~~ 236 (445)
T PRK07228 160 EDTEASLAESVRLLEKWHGADNGRIRYAFTPRFAVSCTEELLRGVRDLADEYGVRIHTHASENRGEIETVEE---ETGMR 236 (445)
T ss_pred ccHHHHHHHHHHHHHHhcCCCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHH---HhCCC
Confidence 1122334455555533 2432 3444456666677899999999999999999999998 66554433221 12321
Q ss_pred CcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccC
Q 014320 255 GPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTA 334 (427)
Q Consensus 255 ~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~ 334 (427)
.+ +.++.....+.++.++|+...+. +.++++++.|+.++. ||.... ..+
T Consensus 237 ----------------~~-~~l~~~g~~~~~~~l~H~~~~~~-~~~~~~~~~g~~v~~--~P~~~~-----------~~~ 285 (445)
T PRK07228 237 ----------------NI-HYLDEVGLTGEDLILAHCVWLDE-EEREILAETGTHVTH--CPSSNL-----------KLA 285 (445)
T ss_pred ----------------HH-HHHHHCCCCCCCcEEEEEecCCH-HHHHHHHHcCCeEEE--ChHHhh-----------hcc
Confidence 00 11111223356788999986654 557788888987764 775211 000
Q ss_pred ceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHh--cCCCCH
Q 014320 335 AKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVE--SGQISV 412 (427)
Q Consensus 335 ~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~--~~~l~l 412 (427)
. ..+ .++++++.|+++++|||+.+++...+.+ .+.++..++..... ...+++
T Consensus 286 ~---~~~---------p~~~~~~~Gv~v~lGtD~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~s~ 339 (445)
T PRK07228 286 S---GIA---------PVPDLLERGINVALGADGAPCNNTLDPF--------------TEMRQAALIQKVDRLGPTAMPA 339 (445)
T ss_pred c---ccC---------cHHHHHHCCCeEEEcCCCCccCCCccHH--------------HHHHHHHHHhhhccCCCcccCH
Confidence 0 012 3678999999999999987654322211 23344444432211 136999
Q ss_pred HHHHHHHchhhhcC
Q 014320 413 TDYVRLTSTEWGRL 426 (427)
Q Consensus 413 ~~~v~~~t~npA~~ 426 (427)
+++++++|.|||+.
T Consensus 340 ~~al~~~T~~~A~~ 353 (445)
T PRK07228 340 RTVFEMATLGGAKA 353 (445)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999975
No 41
>cd01298 ATZ_TRZ_like TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.
Probab=99.97 E-value=5.6e-29 Score=246.70 Aligned_cols=309 Identities=26% Similarity=0.332 Sum_probs=195.6
Q ss_pred EEEECcEEEcCC---CceeeeEEEeCCeEEEeeCCCCCC--CCceEEeCCCCEEeccccccccccccCcC-C--------
Q 014320 55 ILIKGGTVVNAH---HQQIADVYVEDGIVVAVQPNINVG--DDVKVLDATGKFVMPGGIDPHTHLAMEFM-G-------- 120 (427)
Q Consensus 55 ~~i~~~~i~~~~---~~~~~~i~i~~g~I~~vg~~~~~~--~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g-------- 120 (427)
++|+|++|++++ ...+++|+|+||||++|++..+.+ ++.++||++|++|+|||||+|+|+.++.. +
T Consensus 1 ~~i~~~~v~~~~~~~~~~~~~v~i~~g~I~~ig~~~~~~~~~~~~viD~~g~~i~PGlid~H~Hl~~~~~~~~~~~~~~~ 80 (411)
T cd01298 1 ILIRNGTIVTTDPRRVLEDGDVLVEDGRIVAVGPALPLPAYPADEVIDAKGKVVMPGLVNTHTHLAMTLLRGLADDLPLM 80 (411)
T ss_pred CeEEeeEEEEeCCcceeecceEEEECCEEEEecCccccccCCcCeEEeCCCCEEccCccccccchhhHHhhcccCCCCHH
Confidence 379999999975 256889999999999999865432 45789999999999999999999875311 1
Q ss_pred ------------CCChhhHHHH----HHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceecccc---CCC
Q 014320 121 ------------SETIDDFFSG----QAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAIT---KWD 181 (427)
Q Consensus 121 ------------~~~~e~~~~~----~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 181 (427)
..++++++.. +..++++||||++|+..... ....+...+.+.+..+...+..... ...
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~---~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~ 157 (411)
T cd01298 81 EWLKDLIWPLERLLTEEDVYLGALLALAEMIRSGTTTFADMYFFYP---DAVAEAAEELGIRAVLGRGIMDLGTEDVEET 157 (411)
T ss_pred HHHHhhhhhhhhcCCHHHHHHHHHHHHHHHHhcCccEEECccccch---HHHHHHHHHhCCeEEEEcceecCCCcccccH
Confidence 1223444433 34467899999999864322 2333444444544333322211110 111
Q ss_pred hhhHHHHHHHHHH---cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcCCCCcc
Q 014320 182 EVVSDEMEVMVKE---KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPE 257 (427)
Q Consensus 182 ~~~~~~~~~l~~~---~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~ 257 (427)
.+..+++.+++++ .|.+.+|++++++.+..++++++.++++.|+++|+++++|+ ++....+...+ ..|..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~---~~~~~--- 231 (411)
T cd01298 158 EEALAEAERLIREWHGAADGRIRVALAPHAPYTCSDELLREVAELAREYGVPLHIHLAETEDEVEESLE---KYGKR--- 231 (411)
T ss_pred HHHHHHHHHHHHHhcCCCCCceEEEEeCCCCccCCHHHHHHHHHHHHHcCCcEEEEecCCHHHHHHHHH---HhCCC---
Confidence 2334445554432 24678999998887777899999999999999999999996 66544433221 12211
Q ss_pred cccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCcee
Q 014320 258 GHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKY 337 (427)
Q Consensus 258 ~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~ 337 (427)
.++. +......+.++.+.|+..... +.++++++.|+.+. +||...+. + +.
T Consensus 232 -------------~~~~-~~~~~~~~~~~~i~H~~~l~~-~~~~~l~~~gi~~~--~~p~~~~~----~-------~~-- 281 (411)
T cd01298 232 -------------PVEY-LEELGLLGPDVVLAHCVWLTD-EEIELLAETGTGVA--HNPASNMK----L-------AS-- 281 (411)
T ss_pred -------------HHHH-HHHcCCCCCCeEEEEecCCCH-HHHHHHHHcCCeEE--EChHHhhh----h-------hh--
Confidence 0111 111122356778899887664 67888899886554 58863211 0 01
Q ss_pred EEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhc--CCCCHHHH
Q 014320 338 VMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVES--GQISVTDY 415 (427)
Q Consensus 338 ~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~--~~l~l~~~ 415 (427)
..+| ++++++.|+.+++|||+.++....+. -.+..++.++...... .++++.++
T Consensus 282 -~~~~---------~~~~~~~Gv~~~~GsD~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~a 337 (411)
T cd01298 282 -GIAP---------VPEMLEAGVNVGLGTDGAASNNNLDM--------------FEEMRLAALLQKLAHGDPTALPAEEA 337 (411)
T ss_pred -CCCC---------HHHHHHCCCcEEEeCCCCccCCCcCH--------------HHHHHHHHHHhccccCCCCcCCHHHH
Confidence 1244 56699999999999998543211110 1133444333222211 26999999
Q ss_pred HHHHchhhhcC
Q 014320 416 VRLTSTEWGRL 426 (427)
Q Consensus 416 v~~~t~npA~~ 426 (427)
++++|.|||+.
T Consensus 338 l~~~T~~~A~~ 348 (411)
T cd01298 338 LEMATIGGAKA 348 (411)
T ss_pred HHHHHhhHHHH
Confidence 99999999984
No 42
>PRK08203 hydroxydechloroatrazine ethylaminohydrolase; Reviewed
Probab=99.96 E-value=3e-27 Score=236.38 Aligned_cols=312 Identities=18% Similarity=0.204 Sum_probs=198.3
Q ss_pred EEEECcEEEcCCC----ceeeeEEEeCCeEEEeeCCCCCC-CCceEEeCCCCEEeccccccccccccCcC-CC-------
Q 014320 55 ILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNINVG-DDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS------- 121 (427)
Q Consensus 55 ~~i~~~~i~~~~~----~~~~~i~i~~g~I~~vg~~~~~~-~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g~------- 121 (427)
+++.|+.|+++++ ..+++|+|+||||++|++..+.+ ++.++||++|++|||||||+|+|+.+... +.
T Consensus 4 ~i~~~~~v~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~~~~~~~~~vID~~g~~v~PGlVn~H~H~~~~~~~g~~~~~~~~ 83 (451)
T PRK08203 4 WIKNPLAIVTMDAARREIADGGLVVEGGRIVEVGPGGALPQPADEVFDARGHVVTPGLVNTHHHFYQTLTRALPAAQDAE 83 (451)
T ss_pred EEEeccEEEEeCCCceEeeccEEEEECCEEEEEeCCccCCCCCCeEEeCCCCEEecceEeccccccchhcccccccCCCc
Confidence 4555578998775 35789999999999999875533 35689999999999999999999987522 11
Q ss_pred --------------CChhhHH----HHHHHHHcCCceEEecCcCCCCC----cHHHHHHHHHHHhccccceecee-----
Q 014320 122 --------------ETIDDFF----SGQAAALAGGTTMHIDFVIPING----SLTAGFEAYEKKAKNSCMDYGFH----- 174 (427)
Q Consensus 122 --------------~~~e~~~----~~~~~~l~~GvTtv~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~----- 174 (427)
.++++++ .+...++++||||++|+....+. .....++...+.+.|..+.....
T Consensus 84 ~~~~~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~~~~~~ 163 (451)
T PRK08203 84 LFPWLTTLYPVWARLTPEMVRVATQTALAELLLSGCTTSSDHHYLFPNGLRDALDDQIEAAREIGMRFHATRGSMSLGES 163 (451)
T ss_pred HHHHHHHHhHHHHhCCHHHHHHHHHHHHHHHHhcCcCEEEcceeeccccccchHHHHHHHHHHcCCeEEEecceeecCCc
Confidence 1122222 23345689999999998532111 24556677777776654332211
Q ss_pred -cccc-----CCChhhHHHHHHHHHH-cC---CCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHH
Q 014320 175 -MAIT-----KWDEVVSDEMEVMVKE-KG---INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFE 243 (427)
Q Consensus 175 -~~~~-----~~~~~~~~~~~~l~~~-~g---~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~ 243 (427)
.... ...++.++..++++++ .+ ...+++.+++++++.+++++++++++.|+++|+++++|+ |.......
T Consensus 164 ~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~ 243 (451)
T PRK08203 164 DGGLPPDSVVEDEDAILADSQRLIDRYHDPGPGAMLRIALAPCSPFSVSRELMRESAALARRLGVRLHTHLAETLDEEAF 243 (451)
T ss_pred cCCCCccccccCHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHH
Confidence 0000 1123344555555532 11 256888888888888999999999999999999999996 66555443
Q ss_pred HHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCc
Q 014320 244 GQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDD 323 (427)
Q Consensus 244 ~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~ 323 (427)
+.+ ..|.. .+.. +......+.++.+.|+...+. +.++++++.|+.++. ||.....
T Consensus 244 ~~~---~~g~~----------------~~~~-l~~~g~l~~~~~~~H~~~l~~-~~~~~la~~g~~v~~--~P~~~~~-- 298 (451)
T PRK08203 244 CLE---RFGMR----------------PVDY-LEDLGWLGPDVWLAHCVHLDD-AEIARLARTGTGVAH--CPCSNMR-- 298 (451)
T ss_pred HHH---HhCCC----------------HHHH-HHHcCCCCCCeEEEEEeCCCH-HHHHHHHhcCCeEEE--CcHHhhh--
Confidence 322 12221 0111 111122345677888877664 668888999987765 7742211
Q ss_pred ccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHH
Q 014320 324 SWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDT 403 (427)
Q Consensus 324 ~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~ 403 (427)
.+. ..+| ++++++.|+.+++|||+.+.+...+. -.+++++.++..
T Consensus 299 ---------l~~---~~~~---------~~~~~~~Gv~v~lGtD~~~~~~~~~~--------------~~~~~~~~~~~~ 343 (451)
T PRK08203 299 ---------LAS---GIAP---------VRELRAAGVPVGLGVDGSASNDGSNL--------------IGEARQALLLQR 343 (451)
T ss_pred ---------hcc---CCCC---------HHHHHHCCCeEEEecCCCccCCCcCH--------------HHHHHHHHHHhh
Confidence 000 1234 45689999999999997433211111 124455544432
Q ss_pred HHh-cCCCCHHHHHHHHchhhhcC
Q 014320 404 MVE-SGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 404 ~~~-~~~l~l~~~v~~~t~npA~~ 426 (427)
... ...+++.++++++|.|||+.
T Consensus 344 ~~~~~~~i~~~~~l~~~T~~~A~~ 367 (451)
T PRK08203 344 LRYGPDAMTAREALEWATLGGARV 367 (451)
T ss_pred cccCCCCCCHHHHHHHHHHHHHHH
Confidence 211 24699999999999999984
No 43
>PRK09045 N-ethylammeline chlorohydrolase; Provisional
Probab=99.96 E-value=3.9e-27 Score=234.89 Aligned_cols=310 Identities=20% Similarity=0.195 Sum_probs=196.2
Q ss_pred ccEEEECcEEEcCCC----ceeeeEEEeCCeEEEeeCCCCC---CCCceEEeCCCCEEeccccccccccccCcC-CC---
Q 014320 53 SKILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNINV---GDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS--- 121 (427)
Q Consensus 53 ~~~~i~~~~i~~~~~----~~~~~i~i~~g~I~~vg~~~~~---~~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g~--- 121 (427)
.+++|+|+.|++++. .++++|+|+||||++||+.... .++.++||++|++|||||||+|+|+.++.. |.
T Consensus 7 ~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~Vg~~~~~~~~~~~~~~iD~~g~~v~PG~id~H~Hl~~~~~~g~~~~ 86 (443)
T PRK09045 7 VDLLIEARWIVPVEPAGVVLEDHAVAIRDGRIVAILPRAEARARYAAAETVELPDHVLIPGLINAHTHAAMSLLRGLADD 86 (443)
T ss_pred ccEEEEccEEEEeCCCceEeeccEEEEECCEEEEecCcccccccCCcceEEeCCCCEEecCEeccccChhhHhhhhccCC
Confidence 579999999998663 3578999999999999986432 135689999999999999999999976421 10
Q ss_pred ------------------CChhhHH----HHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceecc---
Q 014320 122 ------------------ETIDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMA--- 176 (427)
Q Consensus 122 ------------------~~~e~~~----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 176 (427)
.+++..+ .+...++++||||+.|+... ....++...+.+.|..+.......
T Consensus 87 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~G~Ttv~d~~~~----~~~~~~~~~~~G~R~~~~~~~~~~~~~ 162 (443)
T PRK09045 87 LPLMTWLQDHIWPAEGAWVSEEFVRDGTLLAIAEMLRGGTTCFNDMYFF----PEAAAEAAHQAGMRAQIGMPVLDFPTA 162 (443)
T ss_pred CCHHHHHHhhhhhhhhccCCHHHHHHHHHHHHHHHHhcCCcEEEecccc----HHHHHHHHHHcCCeEEEecccccCCCc
Confidence 0122222 23445689999999997421 122345555555554333222110
Q ss_pred ccCCChhhHHHHHHHHH-HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcCCC
Q 014320 177 ITKWDEVVSDEMEVMVK-EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGIT 254 (427)
Q Consensus 177 ~~~~~~~~~~~~~~l~~-~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~ 254 (427)
.....++.+++..++.+ +.+.+.+++.+.+++++.++++.++++++.|+++|+++++|+ ++.+++.... +..|..
T Consensus 163 ~~~~~~~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~---~~~g~~ 239 (443)
T PRK09045 163 WASDADEYLAKGLELHDQWRHHPLISTAFAPHAPYTVSDENLERIRTLAEQLDLPIHIHLHETAQEIADSL---KQHGQR 239 (443)
T ss_pred cccCHHHHHHHHHHHHHHhcCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHHcCCCEEEeecCcHHHHHHHH---HHhCCC
Confidence 01112233343333332 346678999999998889999999999999999999999997 5554443332 222321
Q ss_pred CcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccC
Q 014320 255 GPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTA 334 (427)
Q Consensus 255 ~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~ 334 (427)
.++.. ......+.++.+.|+...+. +.++.+++.|+.++. ||..... + +
T Consensus 240 ----------------~~~~l-~~~g~l~~r~~~~H~~~l~~-~~~~~la~~g~~i~~--~P~~~~~----~-------~ 288 (443)
T PRK09045 240 ----------------PLARL-ARLGLLGPRLIAVHMTQLTD-AEIALLAETGCSVVH--CPESNLK----L-------A 288 (443)
T ss_pred ----------------HHHHH-HHcCCCCCCeEEEEecCCCH-HHHHHHHHcCCeEEE--CHHHHhh----h-------c
Confidence 01111 11122345677888887654 567888888977765 7742110 0 0
Q ss_pred ceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHh--cCCCCH
Q 014320 335 AKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVE--SGQISV 412 (427)
Q Consensus 335 ~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~--~~~l~l 412 (427)
. ..+| +.++++.|+.+++|||+.+.....+.+ .+.++..++..... ..++++
T Consensus 289 ~---~~~~---------~~~l~~~Gv~v~lGtD~~~~~~~~~~~--------------~~~~~a~~~~~~~~~~~~~~~~ 342 (443)
T PRK09045 289 S---GFCP---------VAKLLQAGVNVALGTDGAASNNDLDLF--------------GEMRTAALLAKAVAGDATALPA 342 (443)
T ss_pred c---CCCc---------HHHHHHCCCeEEEecCCCCCCCCccHH--------------HHHHHHHHHHhhccCCCCcCCH
Confidence 0 1133 456888999999999985433222211 24444444333221 346999
Q ss_pred HHHHHHHchhhhcC
Q 014320 413 TDYVRLTSTEWGRL 426 (427)
Q Consensus 413 ~~~v~~~t~npA~~ 426 (427)
+++++++|.|||+.
T Consensus 343 ~~al~~~T~~~A~~ 356 (443)
T PRK09045 343 HTALRMATLNGARA 356 (443)
T ss_pred HHHHHHHhHHHHHH
Confidence 99999999999974
No 44
>PRK12394 putative metallo-dependent hydrolase; Provisional
Probab=99.96 E-value=6.4e-27 Score=228.50 Aligned_cols=289 Identities=15% Similarity=0.171 Sum_probs=183.3
Q ss_pred CccEEEECcEEEcCCC--ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHH
Q 014320 52 SSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFS 129 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~--~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~ 129 (427)
+.+++|+|++|+++.. ....+|+|+||||++|++... +.+.++||++|++|+|||||+|+|+... +. +...+
T Consensus 2 ~~~~li~~~~i~~~~~~~~~~~~i~i~~g~I~~i~~~~~-~~~~~viD~~g~~v~PGliD~H~H~~~~--g~---~~~~~ 75 (379)
T PRK12394 2 KNDILITNGHIIDPARNINEINNLRIINDIIVDADKYPV-ASETRIIHADGCIVTPGLIDYHAHVFYD--GT---EGGVR 75 (379)
T ss_pred CccEEEECcEEECCCCCcccccEEEEECCEEEEEcCCCC-CCCCeEEECCCCEEECCEEEeeecCCCC--Cc---ccccC
Confidence 4578999999998653 356789999999999987432 2345899999999999999999998654 32 11222
Q ss_pred HHHHHHcCCceEEecCcCCCCCcHHHHHHH----HHHHhccccceeceeccccC----CCh-h--hHHHHHHHHHH--cC
Q 014320 130 GQAAALAGGTTMHIDFVIPINGSLTAGFEA----YEKKAKNSCMDYGFHMAITK----WDE-V--VSDEMEVMVKE--KG 196 (427)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~----~~~-~--~~~~~~~l~~~--~g 196 (427)
....++++||||++|++...... .+.+.. ..+.+.+..+++++.+.... ... . ..++.++++++ .+
T Consensus 76 ~~~~~l~~G~Ttv~d~g~~~~~~-~~~~~~~~~a~~~~gira~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (379)
T PRK12394 76 PDMYMPPNGVTTVVDAGSAGTAN-FDAFYRTVICASKVRIKAFLTVSPPGQTWSGYQENYDPDNIDENKIHALFRQYRNV 154 (379)
T ss_pred HHHHHHhCCccEEEECCCCCccc-HHHHHHHHhhhhcceeeeEEeeecccccccCcccccChhHCCHHHHHHHHHHCcCc
Confidence 34568999999999987443222 222222 22333455566555432211 011 1 13566666643 35
Q ss_pred CCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChh-hHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHH
Q 014320 197 INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGD-AVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRA 275 (427)
Q Consensus 197 ~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~-~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~ 275 (427)
+.++|+++........+++.+++.++.|+++|+++++|+++.. ..... .+++
T Consensus 155 ~~g~ki~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~e~~~~~~~~------~~~l--------------------- 207 (379)
T PRK12394 155 LQGLKLRVQTEDIAEYGLKPLTETLRIANDLRCPVAVHSTHPVLPMKEL------VSLL--------------------- 207 (379)
T ss_pred EEEEEEEEecccccccchHHHHHHHHHHHHcCCCEEEEeCCCCccHHHH------HHhc---------------------
Confidence 6678877654332356799999999999999999999985432 21110 1111
Q ss_pred HHHHHhcCCCEEEEcC----------CCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCC
Q 014320 276 IRLAEFVNTPLYVVHV----------MSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRA 345 (427)
Q Consensus 276 ~~~~~~~g~~~~i~H~----------~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~ 345 (427)
+....+.|+ ......+.+++++++|+.+.. .++ ++
T Consensus 208 -------~~g~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~-~~g---------------------------~s 252 (379)
T PRK12394 208 -------RRGDIIAHAFHGKGSTILTEEGAVLAEVRQARERGVIFDA-ANG---------------------------RS 252 (379)
T ss_pred -------CCCCEEEecCCCCCCCcCCCCCCChHHHHHHHhCCeEEEe-cCC---------------------------cc
Confidence 111123333 232335677888888863322 111 11
Q ss_pred cccHHHHHHHHhcCC-ceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhh
Q 014320 346 SGHNKALQAALATGI-LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWG 424 (427)
Q Consensus 346 ~~~~~~l~~~l~~G~-~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA 424 (427)
..+.+.+|+++++|. +++||||+.|.+...+. ...++.++.+.. ..+++++++++++|.|||
T Consensus 253 ~~~~~~~~~~l~~G~~~~~lgTD~~~~~~~~~~----------------~~~l~~~~~~~~-~~~~~~~~~~~~at~~~a 315 (379)
T PRK12394 253 HFDMNVARRAIANGFLPDIISSDLSTITKLAWP----------------VYSLPWVLSKYL-ALGMALEDVINACTHTPA 315 (379)
T ss_pred ccchHHHHHHHHCCCCceEEECCCCCCCcccCc----------------cchHHHHHHHHH-HcCCCHHHHHHHHHHHHH
Confidence 224466889999995 89999999887632110 124455665544 456999999999999999
Q ss_pred cC
Q 014320 425 RL 426 (427)
Q Consensus 425 ~~ 426 (427)
++
T Consensus 316 ~~ 317 (379)
T PRK12394 316 VL 317 (379)
T ss_pred HH
Confidence 84
No 45
>PRK06380 metal-dependent hydrolase; Provisional
Probab=99.95 E-value=4e-26 Score=226.25 Aligned_cols=308 Identities=21% Similarity=0.275 Sum_probs=191.7
Q ss_pred cEEEECcEEEcCCC---ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcC-C---------
Q 014320 54 KILIKGGTVVNAHH---QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G--------- 120 (427)
Q Consensus 54 ~~~i~~~~i~~~~~---~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g--------- 120 (427)
+++|+|++|++.+. ..+++|+|+||||++||+... ...++||++|++|+|||||+|+|+.+... +
T Consensus 2 ~~li~~~~v~~~~~~~~~~~~~v~i~~g~I~~ig~~~~--~~~~viD~~g~~v~PG~Vd~H~Hl~~~~~rg~~~~~~l~~ 79 (418)
T PRK06380 2 SILIKNAWIVTQNEKREILQGNVYIEGNKIVYVGDVNE--EADYIIDATGKVVMPGLINTHAHVGMTASKGLFDDVDLEE 79 (418)
T ss_pred eEEEEeeEEEECCCCceeeeeeEEEECCEEEEecCCCC--CCCEEEECCCCEEccCEEeeccCCCccccCCcccCCCHHH
Confidence 37899999998753 357899999999999998543 34689999999999999999999987522 1
Q ss_pred ----------CCChhhHHH----HHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceecc-ccCCChhhH
Q 014320 121 ----------SETIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMA-ITKWDEVVS 185 (427)
Q Consensus 121 ----------~~~~e~~~~----~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 185 (427)
..++++++. +...++++||||+.|+... ....++...+.+.|..+.+..... .........
T Consensus 80 ~~~~~~~~~~~~~~e~~~~~~~~~~~e~l~~G~Tt~~d~~~~----~~~~~~a~~~~G~r~~~~~~~~~~~~~~~~~~~~ 155 (418)
T PRK06380 80 FLMKTFKYDSKRTREGIYNSAKLGMYEMINSGITAFVDLYYS----EDIIAKAAEELGIRAFLSWAVLDEEITTQKGDPL 155 (418)
T ss_pred HHHHHHhhhhcCCHHHHHHHHHHHHHHHHhcCCeEEEccccC----hHHHHHHHHHhCCeEEEecccccCCcccccchHH
Confidence 112333332 3445699999999998532 233455666666665444332211 000111122
Q ss_pred HHHHHHHHH-cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcCCCCcccccccC
Q 014320 186 DEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSR 263 (427)
Q Consensus 186 ~~~~~l~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~~~~~~~ 263 (427)
+...++++. .+...++..+++++...+++++++++++.|+++|+++++|+ |+.+++... ..+.|...
T Consensus 156 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~---~~~~g~~~-------- 224 (418)
T PRK06380 156 NNAENFIREHRNEELVTPSIGVQGIYVANDETYLKAKEIAEKYDTIMHMHLSETRKEVYDH---VKRTGERP-------- 224 (418)
T ss_pred HHHHHHHHHhcCCCCeEEEEECCCCccCCHHHHHHHHHHHHHcCCCEEEEeCCcHHHHHHH---HHHhCCCH--------
Confidence 333333322 22345777778888889999999999999999999999997 554444322 22334210
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCC
Q 014320 264 PPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPI 343 (427)
Q Consensus 264 p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~ppl 343 (427)
++ .+......+.++.+.|+...+. +.++.+++.|+.+.. ||..... .+. ...+|
T Consensus 225 --------ie-~~~~~g~l~~~~~~~H~~~l~~-~d~~~la~~g~~v~~--~P~sn~~-----------l~~--~g~~p- 278 (418)
T PRK06380 225 --------VE-HLEKIGFLNSKLIAAHCVWATY-HEIKLLSKNGVKVSW--NSVSNFK-----------LGT--GGSPP- 278 (418)
T ss_pred --------HH-HHHHCCCCCCCeEEEEeecCCH-HHHHHHHHcCCEEEE--CHHHHHh-----------hcc--CCCCc-
Confidence 11 1111122345677888877653 668888889977765 7753211 000 01244
Q ss_pred CCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHh--cCCCCHHHHHHHHch
Q 014320 344 RASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVE--SGQISVTDYVRLTST 421 (427)
Q Consensus 344 r~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~--~~~l~l~~~v~~~t~ 421 (427)
++++++.|+.+++|||....++..+.+ .+.++..++.+... ...+++.++++++|.
T Consensus 279 --------~~~~~~~Gv~v~lGTD~~~~~~~~d~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~ 336 (418)
T PRK06380 279 --------IPEMLDNGINVTIGTDSNGSNNSLDMF--------------EAMKFSALSVKNERWDASIIKAQEILDFATI 336 (418)
T ss_pred --------HHHHHHCCCeEEEcCCCCcCCCCcCHH--------------HHHHHHHHHhhhccCCCCcCCHHHHHHHHHH
Confidence 456899999999999974322211110 12222222211111 124899999999999
Q ss_pred hhhcC
Q 014320 422 EWGRL 426 (427)
Q Consensus 422 npA~~ 426 (427)
|+||.
T Consensus 337 ~gA~~ 341 (418)
T PRK06380 337 NAAKA 341 (418)
T ss_pred HHHHH
Confidence 99984
No 46
>PRK07203 putative chlorohydrolase/aminohydrolase; Validated
Probab=99.95 E-value=5.1e-26 Score=226.74 Aligned_cols=308 Identities=19% Similarity=0.214 Sum_probs=191.7
Q ss_pred EEEECcEEEcCCC----ceeeeEEEeCCeEEEeeCCCCC---CCCceEEeCCCCEEeccccccccccccCcC-CC-----
Q 014320 55 ILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNINV---GDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS----- 121 (427)
Q Consensus 55 ~~i~~~~i~~~~~----~~~~~i~i~~g~I~~vg~~~~~---~~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g~----- 121 (427)
++|+|++|++.+. ..+++|+|+||+|++||+..+. .++.++||++|++|+|||||+|+|+.+... |.
T Consensus 2 ~li~~~~i~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~~~~~~~~~~~viD~~g~lv~PGfID~H~H~~~~~~rg~~~~~~ 81 (442)
T PRK07203 2 LLIGNGTAITRDPAKPVIEDGAIAIEGNVIVEIGTTDELKAKYPDAEFIDAKGKLIMPGLINSHNHIYSGLARGMMANIP 81 (442)
T ss_pred EEEECCEEEeCCCCCceeeccEEEEECCEEEEEeCchhhccccCCCeEEeCCCCEEecceeeccccchhhhhcccccccC
Confidence 5899999998543 2468999999999999964221 134689999999999999999999875421 10
Q ss_pred -------------------CChhhHHHH----HHHHHcCCceEEecCcCCCCC---cHHHHHHHHHHHhccccceeceec
Q 014320 122 -------------------ETIDDFFSG----QAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKNSCMDYGFHM 175 (427)
Q Consensus 122 -------------------~~~e~~~~~----~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 175 (427)
.++++++.. ...++++||||++|+...... .....++...+.+.|..+.+....
T Consensus 82 ~~~~l~~~l~~~~~~~~~~~t~e~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~~~~~~~~~a~~~~GiR~~~~~~~~d 161 (442)
T PRK07203 82 PPPDFISILKNLWWRLDRALTLEDVYYSALICSLEAIKNGVTTVFDHHASPNYIGGSLFTIADAAKKVGLRAMLCYETSD 161 (442)
T ss_pred CCCCHHHHHHhheehhhhcCCHHHHHHHHHHHHHHHHHcCceEEEccccccccccchHHHHHHHHHHhCCeEEEeccccc
Confidence 122333322 245699999999998532211 223444556666655544332221
Q ss_pred cc-cCCChhhHHHHHHHHHH-cC--CCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHH
Q 014320 176 AI-TKWDEVVSDEMEVMVKE-KG--INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIE 250 (427)
Q Consensus 176 ~~-~~~~~~~~~~~~~l~~~-~g--~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~ 250 (427)
.. .....+.+++..++++. .+ ...+...+++++++.++++.++++.+.|+++|+++++|. |+..+.....+ .
T Consensus 162 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~p~~~~~~s~~~l~~~~~lA~~~g~~i~~H~~E~~~e~~~~~~---~ 238 (442)
T PRK07203 162 RDGEKELQEGVEENIRFIKHIDEAKDDMVEAMFGLHASFTLSDATLEKCREAVKETGRGYHIHVAEGIYDVSDSHK---K 238 (442)
T ss_pred CCcchhHHHHHHHHHHHHHHhcCCCCCceEEEEccCCCcCcCHHHHHHHHHHHHHcCCcEEEEecCChHHHHHHHH---H
Confidence 10 01112233334444332 22 235778889999999999999999999999999999996 77766654432 1
Q ss_pred cCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCC
Q 014320 251 LGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSD 330 (427)
Q Consensus 251 ~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~ 330 (427)
.|.. | + +.++.....+.++.+.|+...+. +.++.+++.|+.|+. ||...+
T Consensus 239 ~g~~---------~-------v-~~l~~~Gll~~~~~~~H~~~~~~-~d~~~la~~g~~v~~--~P~sn~---------- 288 (442)
T PRK07203 239 YGKD---------I-------V-ERLADFGLLGEKTLAAHCIYLSD-EEIDLLKETDTFVVH--NPESNM---------- 288 (442)
T ss_pred cCCC---------H-------H-HHHHhCCCCCCCcEEEEeecCCH-HHHHHHHhcCCeEEE--Cchhhh----------
Confidence 2210 0 0 11111122345667888876654 667888899987776 775221
Q ss_pred cccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHh-cCC
Q 014320 331 FVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVE-SGQ 409 (427)
Q Consensus 331 ~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~-~~~ 409 (427)
..+.. .+| ++++++.|+.+++|||+...+ .+ .+.++..++.+... ...
T Consensus 289 -~l~~g---~~p---------~~~~~~~Gv~v~lGtD~~~~d----~~--------------~~~~~a~~~~~~~~~~~~ 337 (442)
T PRK07203 289 -GNAVG---YNP---------VLEMIKNGILLGLGTDGYTSD----MF--------------ESYKVANFKHKHAGGDPN 337 (442)
T ss_pred -hcccC---CCC---------HHHHHHCCCeEEEcCCCCCcc----HH--------------HHHHHHHHHhccccCCCC
Confidence 11111 244 466999999999999974321 11 13445444432211 123
Q ss_pred CCHHHHHHHHchhhhcC
Q 014320 410 ISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 410 l~l~~~v~~~t~npA~~ 426 (427)
++++++++++|.|||+.
T Consensus 338 ~~~~~~~~~aT~~gA~~ 354 (442)
T PRK07203 338 VGWPESPAMLFENNNKI 354 (442)
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 45789999999999973
No 47
>PRK09228 guanine deaminase; Provisional
Probab=99.95 E-value=4.7e-26 Score=225.72 Aligned_cols=298 Identities=17% Similarity=0.116 Sum_probs=184.6
Q ss_pred eeeeEEEeCCeEEEeeCCCCC----CCCceEEeCCCCEEeccccccccccccCcCCC---------------------CC
Q 014320 69 QIADVYVEDGIVVAVQPNINV----GDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS---------------------ET 123 (427)
Q Consensus 69 ~~~~i~i~~g~I~~vg~~~~~----~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~---------------------~~ 123 (427)
++++|+|+||||++||+..+. +.+.++||++|++|+|||||+|+|+.+..... .+
T Consensus 30 ~~g~I~I~~g~I~~Vg~~~~~~~~~~~~~~viD~~g~lv~PGlVn~H~H~~~~~~~g~~~~~l~~wl~~~~~~~e~~~~~ 109 (433)
T PRK09228 30 EDGLLLVEDGRIVAAGPYAELRAQLPADAEVTDYRGKLILPGFIDTHIHYPQTDMIASYGEQLLDWLNTYTFPEERRFAD 109 (433)
T ss_pred CCeEEEEECCEEEEEcChHHhhhhcCCCCeEEeCCCCEEecceecccccccchhhccCCchHHHHHHHhhhhHHHHHhCC
Confidence 478999999999999986432 22358999999999999999999987652110 01
Q ss_pred hhhHHH----HHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceecc-----ccCCChhhHHHHHHHHHH
Q 014320 124 IDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMA-----ITKWDEVVSDEMEVMVKE 194 (427)
Q Consensus 124 ~e~~~~----~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~ 194 (427)
++..+. +...++++||||+.|+...........++...+.+.|..+.+++... .....++.+++..+++++
T Consensus 110 ~~~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~a~~~~GiR~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 189 (433)
T PRK09228 110 PAYAREVAEFFLDELLRNGTTTALVFGTVHPQSVDALFEAAEARNMRMIAGKVLMDRNAPDGLRDTAESGYDDSKALIER 189 (433)
T ss_pred HHHHHHHHHHHHHHHHhCCceEEEeccccCHHHHHHHHHHHHHcCCeEEeeeeeecCCCCcccccCHHHHHHHHHHHHHH
Confidence 122222 23457999999999975332222344455556666665444333211 011122333344444432
Q ss_pred -cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc-CCcEEEec-CChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHH
Q 014320 195 -KGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (427)
Q Consensus 195 -~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a 271 (427)
.+...+++.+.++..+.++++.++++.+.|+++ |+++++|. |+..+.....+. .|. ++.
T Consensus 190 ~~~~~~~~~~~~p~~~~t~s~~~l~~~~~lA~~~~~~~i~~Hl~E~~~e~~~~~~~---~g~---------~~~------ 251 (433)
T PRK09228 190 WHGKGRLLYAITPRFAPTSTPEQLEAAGALAREHPDVWIQTHLSENLDEIAWVKEL---FPE---------ARD------ 251 (433)
T ss_pred HhCCCCceEEEECCcCCcCCHHHHHHHHHHHHHCCCCceEEeecCChhHHHHHHHH---cCC---------CCC------
Confidence 333467788888888899999999999999998 99999996 777665444321 121 000
Q ss_pred HHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHH
Q 014320 272 TTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKA 351 (427)
Q Consensus 272 ~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~ 351 (427)
..+.++.....+.++.+.|+...+. +.++.+++.|+.+.. ||...+. .+.. .+|
T Consensus 252 ~~~~l~~~G~l~~~~~~~H~~~l~~-~~~~~la~~g~~v~~--~P~sn~~-----------lg~g---~~~--------- 305 (433)
T PRK09228 252 YLDVYERYGLLGPRAVFAHCIHLED-RERRRLAETGAAIAF--CPTSNLF-----------LGSG---LFD--------- 305 (433)
T ss_pred HHHHHHHcCCCCCCeEEEeccCCCH-HHHHHHHHcCCeEEE--CCccHHh-----------hcCC---CcC---------
Confidence 0111111222345788999987764 678888999987765 7753211 0111 234
Q ss_pred HHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 352 LQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 352 l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+.++++.|+.+++|||..+.+ ..+.+ .+.++...+.+. ....++++++++++|.|||++
T Consensus 306 ~~~~~~~Gv~v~lGtD~~~~~-~~d~~--------------~~~~~~~~~~~~-~~~~~~~~~~l~~aT~~~A~~ 364 (433)
T PRK09228 306 LKRADAAGVRVGLGTDVGGGT-SFSML--------------QTMNEAYKVQQL-QGYRLSPFQAFYLATLGGARA 364 (433)
T ss_pred HHHHHHCCCeEEEecCCCCCC-CCCHH--------------HHHHHHHHHhhc-ccCCCCHHHHHHHHhHHHHHH
Confidence 456888999999999974311 11110 122333322221 245689999999999999984
No 48
>TIGR02967 guan_deamin guanine deaminase. This model describes guanine deaminase, which hydrolyzes guanine to xanthine and ammonia. Xanthine can then be converted to urate by xanthine dehydrogenase, and urate subsequently degraded. In some bacteria, the guanine deaminase gene is found near the xdhABC genes for xanthine dehydrogenase. Non-homologous forms of guanine deaminase also exist, as well as distantly related forms outside the scope of this model.
Probab=99.95 E-value=3.1e-26 Score=225.88 Aligned_cols=298 Identities=19% Similarity=0.149 Sum_probs=184.2
Q ss_pred eeeeEEEeCCeEEEeeCCCCC----CCCceEEeCCCCEEeccccccccccccCcC-CC--------------------CC
Q 014320 69 QIADVYVEDGIVVAVQPNINV----GDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS--------------------ET 123 (427)
Q Consensus 69 ~~~~i~i~~g~I~~vg~~~~~----~~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g~--------------------~~ 123 (427)
++++|+|+||||++||+..+. +++.++||++|++|||||||+|+|+.+... +. .+
T Consensus 5 ~~~~V~V~~g~I~~Vg~~~~~~~~~~~~~~viD~~g~~v~PGlId~H~Hl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 84 (401)
T TIGR02967 5 EDGLLVVENGRIVAVGDYAELKETLPAGVEIDDYRGHLIMPGFIDTHIHYPQTEMIASYGEQLLEWLEKYTFPTEARFAD 84 (401)
T ss_pred eceEEEEECCEEEEecCcchhhhccCCCCeEEeCCCCEEecceeecccCchhhhhcccCCchHHHHHhhCcCccccccCC
Confidence 468999999999999986432 235689999999999999999999875311 10 01
Q ss_pred hhhHH----HHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceec---c--ccCCChhhHHHHHHHHHH
Q 014320 124 IDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHM---A--ITKWDEVVSDEMEVMVKE 194 (427)
Q Consensus 124 ~e~~~----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~l~~~ 194 (427)
++..+ .....++++||||++|+...........++...+.+.|..+...... + ......+..++.++++++
T Consensus 85 ~~~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~ 164 (401)
T TIGR02967 85 PDHAEEVAEFFLDELLRNGTTTALVFATVHPESVDALFEAALKRGMRMIAGKVLMDRNAPDYLRDTAESSYDESKALIER 164 (401)
T ss_pred HHHHHHHHHHHHHHHHhCCCcEEEeccccCHHHHHHHHHHHHHCCCeEEEeeeeecCCCCcccccCHHHHHHHHHHHHHH
Confidence 22222 22356799999999998643322233455566666655433222111 0 011112334455555532
Q ss_pred -cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc-CCcEEEec-CChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHH
Q 014320 195 -KGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (427)
Q Consensus 195 -~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a 271 (427)
.+...+++.+.++..+.+++++++++++.|+++ |+++++|+ |+..+.....+. .|. +|..
T Consensus 165 ~~~~g~i~~~~~~~~~~~~s~e~l~~~~~~A~~~~g~~v~~H~~e~~~~~~~~~~~---~~~---------~~~~----- 227 (401)
T TIGR02967 165 WHGKGRLLYAVTPRFAPTSSPEQLAAAGELAKEYPDVYVQTHLSENKDEIAWVKEL---FPE---------AKDY----- 227 (401)
T ss_pred HhCcCCceEEEECCcCCcCcHHHHHHHHHHHHhCCCCeeEEEECCCchHHHHHHHH---cCC---------CCcH-----
Confidence 344468888888888889999999999999999 99999997 676665544321 111 1100
Q ss_pred HHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHH
Q 014320 272 TTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKA 351 (427)
Q Consensus 272 ~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~ 351 (427)
.+.++.....|.++.+.|+...+. +.++.+++.|+.+.. ||...+.. +. ..+|
T Consensus 228 -~~~l~~~g~lg~~~~~~H~~~~~~-~~~~~l~~~g~~v~~--~P~~~~~~-----------~~---g~~~--------- 280 (401)
T TIGR02967 228 -LDVYDHYGLLGRRSVFAHCIHLSD-EECQRLAETGAAIAH--CPTSNLFL-----------GS---GLFN--------- 280 (401)
T ss_pred -HHHHHHCCCCCCCeEEEecccCCH-HHHHHHHHcCCeEEE--ChHHHHHh-----------cc---CCCC---------
Confidence 011111222345777889887664 668889999987765 77532110 01 1234
Q ss_pred HHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 352 LQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 352 l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+.++++.|+.+++|||..... ..+.+ .+.+....+... ....+++.++++++|.|||+.
T Consensus 281 ~~~~~~~Gv~v~lGtD~~~~~-~~~~~--------------~~~~~~~~~~~~-~~~~~~~~~~l~~aT~~~A~~ 339 (401)
T TIGR02967 281 LKKALEHGVRVGLGTDVGGGT-SFSML--------------QTLREAYKVSQL-QGARLSPFEAFYLATLGGARA 339 (401)
T ss_pred HHHHHHCCCeEEEecCCCCCC-CcCHH--------------HHHHHHHHHhhh-cCCCCCHHHHHHHHHHHHHHH
Confidence 455888999999999964321 11110 122222222121 234699999999999999974
No 49
>PRK12393 amidohydrolase; Provisional
Probab=99.95 E-value=5.5e-26 Score=226.92 Aligned_cols=313 Identities=20% Similarity=0.230 Sum_probs=192.0
Q ss_pred ccEEEECcE-EEcCCC----ceee-eEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcC-CC----
Q 014320 53 SKILIKGGT-VVNAHH----QQIA-DVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS---- 121 (427)
Q Consensus 53 ~~~~i~~~~-i~~~~~----~~~~-~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g~---- 121 (427)
.+++|+|++ |++.+. ..++ +|+|+||+|++||+. ...++.++||++|++|+|||||+|+|+.+.+. |.
T Consensus 2 ~~~li~~~~~v~~~~~~~~~~~~~~~v~I~~g~I~~Vg~~-~~~~~~~viD~~g~~v~PG~VnaH~Hl~~~~~rg~~~~~ 80 (457)
T PRK12393 2 PSLLIRNAAAIMTGLPGDAARLGGPDIRIRDGRIAAIGAL-TPLPGERVIDATDCVVYPGWVNTHHHLFQSLLKGVPAGI 80 (457)
T ss_pred CcEEEECCeEEEecCCCccccccCceEEEECCEEEEEecc-CCCCCCeEEeCCCCEEecCEeecccCccccccccccccc
Confidence 468999996 676443 3344 899999999999983 22345789999999999999999999987531 11
Q ss_pred ------------------CChhhHH----HHHHHHHcCCceEEecCcCC---CCC--cHHHHHHHHHHHhccccceecee
Q 014320 122 ------------------ETIDDFF----SGQAAALAGGTTMHIDFVIP---ING--SLTAGFEAYEKKAKNSCMDYGFH 174 (427)
Q Consensus 122 ------------------~~~e~~~----~~~~~~l~~GvTtv~d~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~ 174 (427)
.++++++ .+...++++||||+.|+... ... .....+++..+.+.|..+.++..
T Consensus 81 ~~~~~~wl~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~ 160 (457)
T PRK12393 81 NQSLTAWLAAVPYRFRARFDEDLFRLAARIGLVELLRSGCTTVADHHYLYHPGMPFDTGDILFDEAEALGMRFVLCRGGA 160 (457)
T ss_pred CCchHHHhhhCcchhhhhCCHHHHHHHHHHHHHHHHhCCccEeecchhhcccccccchHHHHHHHHHHcCCeEEEEcccc
Confidence 1222222 23455799999999998421 111 23456667777776654433221
Q ss_pred c-------cc-c----CCChhhHHHHHHHHHH-cCC---CeEEEEEecCCC-ccCCHHHHHHHHHHHHHcCCcEEEec-C
Q 014320 175 M-------AI-T----KWDEVVSDEMEVMVKE-KGI---NSFKFFMAYKGS-FMINDELLIEGFKRCKSLGALAMVHA-E 236 (427)
Q Consensus 175 ~-------~~-~----~~~~~~~~~~~~l~~~-~g~---~~ik~~~~~~~~-~~~~~~~l~~~~~~a~~~g~~v~~H~-e 236 (427)
. .. . ...++.++..+++.+. .+. ..+++.+.++.+ +.++++.++++++.|+++|+++++|+ |
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~g~~~~~H~~e 240 (457)
T PRK12393 161 TQTRGDHPGLPTALRPETLDQMLADVERLVSRYHDASPDSLRRVVVAPTTPTFSLPPELLREVARAARGMGLRLHSHLSE 240 (457)
T ss_pred ccccccCCCCCCcccccCHHHHHHHHHHHHHHhcCCCcCCceEEEEcCCCCCCCcCHHHHHHHHHHHHHcCCeEEEEeCC
Confidence 1 00 0 0112233444444432 111 236667777776 78899999999999999999999997 5
Q ss_pred ChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCc
Q 014320 237 NGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVV 316 (427)
Q Consensus 237 ~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p 316 (427)
..++++...+ ..|. +| +. .+...+..+.++.+.|+...+. +.++++++.|+.++. ||
T Consensus 241 ~~~~~~~~~~---~~g~---------~~-------~~-~l~~~g~l~~~~~~~H~~~l~~-~d~~~la~~g~~v~~--~P 297 (457)
T PRK12393 241 TVDYVDFCRE---KYGM---------TP-------VQ-FVAEHDWLGPDVWFAHLVKLDA-EEIALLAQTGTGIAH--CP 297 (457)
T ss_pred CHHHHHHHHH---HhCC---------CH-------HH-HHHHcCCCCCCeEEEEEecCCH-HHHHHHHHcCCeEEE--Cc
Confidence 5555444322 1221 11 00 1111122345677888877664 678888999987775 77
Q ss_pred cceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHh
Q 014320 317 SGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEER 396 (427)
Q Consensus 317 ~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~ 396 (427)
.... ..|. ..+| ++++++.|+.+++|||+.+.+...+.+ .+..
T Consensus 298 ~sn~-----------~lg~---g~~~---------~~~~~~~Gv~v~lGtD~~~~~~~~d~~--------------~~~~ 340 (457)
T PRK12393 298 QSNG-----------RLGS---GIAP---------ALAMEAAGVPVSLGVDGAASNESADML--------------SEAH 340 (457)
T ss_pred hhhh-----------hhcc---cCCC---------HHHHHHCCCeEEEecCCcccCCCccHH--------------HHHH
Confidence 4211 1111 1244 456999999999999975432211110 1222
Q ss_pred HHHHHHHHH-hcCCCCHHHHHHHHchhhhcC
Q 014320 397 MHLVWDTMV-ESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 397 l~~~~~~~~-~~~~l~l~~~v~~~t~npA~~ 426 (427)
+..+..... ....+++.++++++|.|||++
T Consensus 341 ~a~~~~~~~~~~~~~~~~~~l~~~T~~~A~~ 371 (457)
T PRK12393 341 AAWLLHRAEGGADATTVEDVVHWGTAGGARV 371 (457)
T ss_pred HHHHHhhhcCCCCCCCHHHHHHHHhHHHHHH
Confidence 222221110 113599999999999999974
No 50
>TIGR03314 Se_ssnA putative selenium metabolism protein SsnA. Members of this protein family are found exclusively in genomes that contain putative set of labile selenium-dependent enzyme accessory proteins as well as homologs of a labile selenium-dependent purine hydroxylase. A mutant in this gene in Escherichia coli had improved stationary phase viability. The function is unknown.
Probab=99.95 E-value=7.2e-26 Score=225.05 Aligned_cols=298 Identities=20% Similarity=0.236 Sum_probs=193.7
Q ss_pred EEECcEEEcCCC----ceeeeEEEeCCeEEEeeCCCCC---CCCceEEeCCCCEEeccccccccccccCcC-CC------
Q 014320 56 LIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNINV---GDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS------ 121 (427)
Q Consensus 56 ~i~~~~i~~~~~----~~~~~i~i~~g~I~~vg~~~~~---~~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g~------ 121 (427)
+|+|++|++.+. ..+++|+|+||+|++||+..+. .++.++||++|++|+|||||+|+|+.+... |.
T Consensus 2 li~~~~i~t~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~~~~~~id~~g~~v~PG~vd~H~H~~~~~~rg~~~d~~~ 81 (441)
T TIGR03314 2 LIGNGTAVQLDPTRPIQEGGDIAIDGDVIKAVGPTEELKQKYPEATFIDAKGKLIMPGFINTHNHFYSTFARGMMADIPP 81 (441)
T ss_pred EEECCEEEecCCCCceEeccEEEEECCEEEEEcCchhhcccCCCCeEEeCCCCEEecCeeecccchhhhhhccccccCCC
Confidence 689999997543 3568999999999999975322 134578999999999999999999976421 10
Q ss_pred ------------------CChhhHHHH----HHHHHcCCceEEecCcCCCC---CcHHHHHHHHHHHhccccceeceecc
Q 014320 122 ------------------ETIDDFFSG----QAAALAGGTTMHIDFVIPIN---GSLTAGFEAYEKKAKNSCMDYGFHMA 176 (427)
Q Consensus 122 ------------------~~~e~~~~~----~~~~l~~GvTtv~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (427)
.++++.+.+ ...++++||||++|+..... ......+++..+.+.|..+.+.+...
T Consensus 82 ~~~~~~~l~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~~~~~~~~~a~~~~GiR~~~~~~~~~~ 161 (441)
T TIGR03314 82 PPDFISILKNLWWRLDRALTLEDVYYSGLICSLDAIKSGCTTVIDHHASPNAITGSLSTIRKAADEAGLRTMLCYETSDR 161 (441)
T ss_pred CCCHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHHHcCCeEEEecccccccccchHHHHHHHHHHhCCeEEEeeeeecC
Confidence 122333222 23468999999999853321 12345567777777776665544321
Q ss_pred cc-CCChhhHHHHHHHHH-HcC--CCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHH-----
Q 014320 177 IT-KWDEVVSDEMEVMVK-EKG--INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQK----- 246 (427)
Q Consensus 177 ~~-~~~~~~~~~~~~l~~-~~g--~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~----- 246 (427)
.. ....+.+++..++++ +.+ ...++..+++++++.++++.++++.+.|+++|+++++|+ |+..++..+.+
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~p~~~~t~s~~~l~~~~~lA~~~~~~i~~H~~E~~~e~~~~~~~~g~~ 241 (441)
T TIGR03314 162 DGGKEMQEGVEENIAFIKKSSGKEPYLVEAHIGAHAPFTVSDAGLEMCREAVQATGRGFHIHVAEDIYDVEDSHHKYGKD 241 (441)
T ss_pred CCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHcCCC
Confidence 11 111222333333432 232 235788889999999999999999999999999999996 77766655432
Q ss_pred ---HHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCc
Q 014320 247 ---RMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDD 323 (427)
Q Consensus 247 ---~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~ 323 (427)
++.+.|+ .+.++.+.|+...+. +.++.+++.|+.|+. ||...+
T Consensus 242 ~~~~l~~~G~----------------------------l~~~~~~~H~~~~~~-~d~~~la~~g~~v~~--cP~sn~--- 287 (441)
T TIGR03314 242 IVERLADFGL----------------------------LGSKTLAAHCIYLSD-REIELLNETDTFVVH--NPESNM--- 287 (441)
T ss_pred HHHHHHHCCC----------------------------CCCCeEEEEEecCCH-HHHHHHHHcCCcEEE--CHHHHh---
Confidence 2333333 344666777776654 668888899988876 775221
Q ss_pred ccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHH
Q 014320 324 SWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDT 403 (427)
Q Consensus 324 ~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~ 403 (427)
..+.. .+|+ .++++.|+.++||||+.+.+.- .+.++..++.+
T Consensus 288 --------~l~~G---~~p~---------~~~~~~Gv~v~LGtD~~~~d~~------------------~em~~a~~~~~ 329 (441)
T TIGR03314 288 --------GNAVG---YNPV---------LRMFKNGILLGLGTDGYTSDMF------------------ESLKFANFKHK 329 (441)
T ss_pred --------hhccC---CCCH---------HHHHHCCCEEEEcCCCCCcCHH------------------HHHHHHHHHhc
Confidence 11111 2554 5589999999999997543211 23444444432
Q ss_pred HHh-cCCCCHHHHHHHHchhhhc
Q 014320 404 MVE-SGQISVTDYVRLTSTEWGR 425 (427)
Q Consensus 404 ~~~-~~~l~l~~~v~~~t~npA~ 425 (427)
... .....+.++++++|.|+|+
T Consensus 330 ~~~~~~~~~~~~~~~~aT~~ga~ 352 (441)
T TIGR03314 330 DAGGDLNAAWPESPAMLFENNNE 352 (441)
T ss_pred cccCCCCccHHHHHHHHHHHHHH
Confidence 211 1123467899999999987
No 51
>PRK06038 N-ethylammeline chlorohydrolase; Provisional
Probab=99.95 E-value=1.2e-25 Score=222.98 Aligned_cols=309 Identities=21% Similarity=0.300 Sum_probs=191.1
Q ss_pred ccEEEECcEEEcCCC--ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcC-C---------
Q 014320 53 SKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G--------- 120 (427)
Q Consensus 53 ~~~~i~~~~i~~~~~--~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g--------- 120 (427)
.+++|+|++|++++. ..+++|+|+||+|++|++.... +..++||+.|++|+|||||+|+|+.+... +
T Consensus 2 ~~~~~~~~~i~~~~~~~~~~~~v~v~~g~I~~i~~~~~~-~~~~~id~~g~~v~PG~vd~H~H~~~~~~~g~~~~~~~~~ 80 (430)
T PRK06038 2 ADIIIKNAYVLTMDAGDLKKGSVVIEDGTITEVSESTPG-DADTVIDAKGSVVMPGLVNTHTHAAMTLFRGYADDLPLAE 80 (430)
T ss_pred CCEEEEccEEEECCCCeeeccEEEEECCEEEEecCCCCC-CCCEEEeCCCCEEecCeeecccCcchhhhhhccCCCCHHH
Confidence 357999999997653 4568999999999999986432 34579999999999999999999976421 1
Q ss_pred -----------CCChhhHHH----HHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceec-cccCCChhh
Q 014320 121 -----------SETIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHM-AITKWDEVV 184 (427)
Q Consensus 121 -----------~~~~e~~~~----~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 184 (427)
..++++.+. +...++++||||+.|+... .....++..+.+.+....++... ......++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~~~----~~~~~~a~~~~GiR~~~~~~~~d~~~~~~~~~~ 156 (430)
T PRK06038 81 WLNDHIWPAEAKLTAEDVYAGSLLACLEMIKSGTTSFADMYFY----MDEVAKAVEESGLRAALSYGMIDLGDDEKGEAE 156 (430)
T ss_pred HHHhhhhhchhcCCHHHHHHHHHHHHHHHHhcCceeEEccccC----HHHHHHHHHHhCCeEEEEchhccCCCccchHHH
Confidence 112233222 2445699999999997531 22344555555555433322110 001111223
Q ss_pred HHHHHHHHHH-cC--CCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcCCCCccccc
Q 014320 185 SDEMEVMVKE-KG--INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPEGHA 260 (427)
Q Consensus 185 ~~~~~~l~~~-~g--~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~~~~ 260 (427)
+++..++++. .+ ...++..++++.+..+++++++++++.|+++|+++++|+ ++........+ ..|..
T Consensus 157 l~~~~~~i~~~~~~~~g~v~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~---~~G~~------ 227 (430)
T PRK06038 157 LKEGKRFVKEWHGAADGRIKVMYGPHAPYTCSEEFLSKVKKLANKDGVGIHIHVLETEAELNQMKE---QYGMC------ 227 (430)
T ss_pred HHHHHHHHHHhcCCCCCceEEEEeCCcCccCCHHHHHHHHHHHHHcCCcEEEEcCCCHHHHHHHHH---HhCCC------
Confidence 3444444432 22 235777778888888999999999999999999999998 55443322211 11221
Q ss_pred ccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEc
Q 014320 261 LSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMS 340 (427)
Q Consensus 261 ~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~ 340 (427)
.+ +.++.....+.++.+.|+...+. +.++++++.|+.+++ ||...+.. +. ..
T Consensus 228 ----------~i-~~l~~~g~l~~r~~~~H~~~l~~-~~~~~la~~g~~v~~--~P~~n~~~-----------~~---~~ 279 (430)
T PRK06038 228 ----------SV-NYLDDIGFLGPDVLAAHCVWLSD-GDIEILRERGVNVSH--NPVSNMKL-----------AS---GI 279 (430)
T ss_pred ----------HH-HHHHHcCCCCCCeEEEEEecCCH-HHHHHHHhcCCEEEE--ChHHhhhh-----------cc---CC
Confidence 00 01111222345677888877664 568888999987775 67532210 01 12
Q ss_pred CCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHH--hcCCCCHHHHHHH
Q 014320 341 PPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV--ESGQISVTDYVRL 418 (427)
Q Consensus 341 pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~--~~~~l~l~~~v~~ 418 (427)
+| +.++++.|+.+++|||+.+.....+.+ .+.++..++.... ....+++.+++++
T Consensus 280 ~p---------~~~~~~~Gv~v~lGtD~~~~~~~~d~~--------------~~~~~a~~~~~~~~~~~~~~~~~~al~~ 336 (430)
T PRK06038 280 AP---------VPKLLERGVNVSLGTDGCASNNNLDMF--------------EEMKTAALLHKVNTMDPTALPARQVLEM 336 (430)
T ss_pred CC---------HHHHHHCCCeEEEeCCCCccCCCcCHH--------------HHHHHHHHHhhhccCCCCcCCHHHHHHH
Confidence 44 456999999999999964322211110 1222322222211 1246899999999
Q ss_pred HchhhhcC
Q 014320 419 TSTEWGRL 426 (427)
Q Consensus 419 ~t~npA~~ 426 (427)
+|.|||+.
T Consensus 337 aT~~gA~~ 344 (430)
T PRK06038 337 ATVNGAKA 344 (430)
T ss_pred HhHHHHHH
Confidence 99999974
No 52
>PRK08204 hypothetical protein; Provisional
Probab=99.95 E-value=7.6e-26 Score=226.43 Aligned_cols=304 Identities=20% Similarity=0.253 Sum_probs=187.3
Q ss_pred ccEEEECcEEEcCCC----ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCC--------
Q 014320 53 SKILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG-------- 120 (427)
Q Consensus 53 ~~~~i~~~~i~~~~~----~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g-------- 120 (427)
.+++|+|++|++.++ ..+++|+|+||+|++||+..+.+ +.++||++|++|+|||||+|+|+.+....
T Consensus 2 ~~~li~~~~v~~~~~~~~~~~~~~v~V~~g~I~~Vg~~~~~~-~~~viD~~g~~v~PGlId~H~H~~~~~~~~~~~~~~~ 80 (449)
T PRK08204 2 KRTLIRGGTVLTMDPAIGDLPRGDILIEGDRIAAVAPSIEAP-DAEVVDARGMIVMPGLVDTHRHTWQSVLRGIGADWTL 80 (449)
T ss_pred CcEEEECcEEEecCCCCCccccceEEEECCEEEEecCCCCCC-CCeEEeCCCCEEecCEEeeeeccchhhhccccCCCcH
Confidence 357899999997553 35789999999999999864433 56899999999999999999998643110
Q ss_pred -------------CCChhhHH----HHHHHHHcCCceEEecCcCCCCC--cHHHHHHHHHHHhccccceeceecccc---
Q 014320 121 -------------SETIDDFF----SGQAAALAGGTTMHIDFVIPING--SLTAGFEAYEKKAKNSCMDYGFHMAIT--- 178 (427)
Q Consensus 121 -------------~~~~e~~~----~~~~~~l~~GvTtv~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 178 (427)
..++++.+ .....++++||||++|+...... .....++...+.+.+..+..+......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~L~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~G~r~~~~~~~~~~~~~~~ 160 (449)
T PRK08204 81 QTYFREIHGNLGPMFRPEDVYIANLLGALEALDAGVTTLLDWSHINNSPEHADAAIRGLAEAGIRAVFAHGSPGPSPYWP 160 (449)
T ss_pred HHHHHhhcccccccCCHHHHHHHHHHHHHHHHhcCCeEEeecccccCChhHHHHHHHHHHHcCCeEEEEccccCCCCCCC
Confidence 01122222 23456799999999997643321 334455666666655433222111100
Q ss_pred -CCChhhHHHHHHHHH--HcCCC-eEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhh-HHHHHHHHHHcC
Q 014320 179 -KWDEVVSDEMEVMVK--EKGIN-SFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDA-VFEGQKRMIELG 252 (427)
Q Consensus 179 -~~~~~~~~~~~~l~~--~~g~~-~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~-~~~~~~~l~~~G 252 (427)
....+..++++.+.+ ..+++ .+...+..+++..++++.++++++.|+++|+++++|+ |+... .....+.+.+.|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~l~~~g 240 (449)
T PRK08204 161 FDSVPHPREDIRRVKKRYFSSDDGLLTLGLAIRGPEFSSWEVARADFRLARELGLPISMHQGFGPWGATPRGVEQLHDAG 240 (449)
T ss_pred cchhhhhHHHHHHHHHhhccCCCCceEEEEecCCcccCCHHHHHHHHHHHHHcCCcEEEEEcCCCcccCCCHHHHHHHCC
Confidence 011122333333332 12333 3445556666777889999999999999999999997 44321 111112222222
Q ss_pred CCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcc
Q 014320 253 ITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFV 332 (427)
Q Consensus 253 ~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~ 332 (427)
+ .+.++.++|+...+. +.++++++.|+.++. ||.+... +
T Consensus 241 ~----------------------------~~~~~~i~H~~~~~~-~~~~~la~~g~~v~~--~P~~~~~----~------ 279 (449)
T PRK08204 241 L----------------------------LGPDLNLVHGNDLSD-DELKLLADSGGSFSV--TPEIEMM----M------ 279 (449)
T ss_pred C----------------------------CCCCeEEEecCCCCH-HHHHHHHHcCCCEEE--ChHHHhh----h------
Confidence 2 345677999988765 678899999988876 7753211 0
Q ss_pred cCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHH--------
Q 014320 333 TAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTM-------- 404 (427)
Q Consensus 333 ~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~-------- 404 (427)
|.. .+| +.++++.|+.+++|||+.+.... +. | .+.++.......
T Consensus 280 -g~~---~~~---------~~~~~~~Gv~v~lGtD~~~~~~~-~~-----~---------~~~~~a~~~~~~~~~~~~~~ 331 (449)
T PRK08204 280 -GHG---YPV---------TGRLLAHGVRPSLGVDVVTSTGG-DM-----F---------TQMRFALQAERARDNAVHLR 331 (449)
T ss_pred -cCC---CCc---------HHHHHhcCCceeeccccCCCCCc-CH-----H---------HHHHHHHHHHHhhccccccc
Confidence 011 244 45588999999999997543221 10 0 122222221111
Q ss_pred -----HhcCCCCHHHHHHHHchhhhcC
Q 014320 405 -----VESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 405 -----~~~~~l~l~~~v~~~t~npA~~ 426 (427)
..+..+++.++++++|.|+|+.
T Consensus 332 ~~~~~~~~~~~~~~~al~~~T~~gA~~ 358 (449)
T PRK08204 332 EGGMPPPRLTLTARQVLEWATIEGARA 358 (449)
T ss_pred ccccCCCcCCCCHHHHHHHHhHHHHHH
Confidence 0135699999999999999974
No 53
>cd01303 GDEase Guanine deaminase (GDEase). Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and therefore can play a role in the regulation of cellular GTP and the guanylate nucleotide pool.
Probab=99.95 E-value=1.6e-25 Score=221.96 Aligned_cols=299 Identities=17% Similarity=0.100 Sum_probs=184.4
Q ss_pred eeeeEEEeCCeEEEeeCCCCC----CCCceEEeCCCCEEeccccccccccccCcC-CC---------------------C
Q 014320 69 QIADVYVEDGIVVAVQPNINV----GDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS---------------------E 122 (427)
Q Consensus 69 ~~~~i~i~~g~I~~vg~~~~~----~~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g~---------------------~ 122 (427)
++++|+|+||+|++||+..+. +++.++||++|++|||||||+|+|+.+... |. .
T Consensus 25 ~~g~V~v~~g~I~~vG~~~~~~~~~~~~~~viD~~g~~v~PGlVn~H~Hl~~~~~rg~~~~~~l~~wl~~~~~~~e~~~~ 104 (429)
T cd01303 25 EDGLIVVVDGNIIAAGAAETLKRAAKPGARVIDSPNQFILPGFIDTHIHAPQYANIGSGLGEPLLDWLETYTFPEEAKFA 104 (429)
T ss_pred CCeEEEEECCEEEEeCchhhhhhhcCCCceEEcCCCCEEecceeeeeecccccccccccCCCcHHHHHHhhhhHHHHhcC
Confidence 578999999999999985432 345689999999999999999999976421 11 0
Q ss_pred ChhhH----HHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccc-c----CCChhhHHHHHHHHH
Q 014320 123 TIDDF----FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI-T----KWDEVVSDEMEVMVK 193 (427)
Q Consensus 123 ~~e~~----~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~l~~ 193 (427)
+.+.. ......++++||||++|+...........+++..+.+.|..+.+...... . ....+.+++..++++
T Consensus 105 ~~~~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 184 (429)
T cd01303 105 DPAYAREVYGRFLDELLRNGTTTACYFATIHPESTEALFEEAAKRGQRAIAGKVCMDRNAPEYYRDTAESSYRDTKRLIE 184 (429)
T ss_pred CHHHHHHHHHHHHHHHHhCCceEEEeecccChhHHHHHHHHHHHhCCeEEEeeeeecCCCCcccccCHHHHHHHHHHHHH
Confidence 11111 12234569999999999864322234455666777776655443322110 0 111122333344433
Q ss_pred H-cCC-CeEEEEEecCCCccCCHHHHHHHHHHHHHcC-CcEEEec-CChhhHHHHHHHHHHcCCCCcccccccCCHHHHH
Q 014320 194 E-KGI-NSFKFFMAYKGSFMINDELLIEGFKRCKSLG-ALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEG 269 (427)
Q Consensus 194 ~-~g~-~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g-~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~ 269 (427)
. .+. ..+...+.++..+.++++.++++++.|+++| +++++|+ |+..++..+.+. .|-. .+|
T Consensus 185 ~~~~~~~~v~~~~~p~~~~~~s~e~l~~~~~~A~~~g~~~v~~H~~e~~~e~~~~~~~---~g~~-------~~p----- 249 (429)
T cd01303 185 RWHGKSGRVKPAITPRFAPSCSEELLAALGKLAKEHPDLHIQTHISENLDEIAWVKEL---FPGA-------RDY----- 249 (429)
T ss_pred HHhCcCCceEEEEecCcCCcCCHHHHHHHHHHHHHCCCCeEEEeeCCCHHHHHHHHHH---cCCC-------CCH-----
Confidence 2 222 4577778888888999999999999999999 9999997 666555433321 1100 000
Q ss_pred HHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccH
Q 014320 270 EATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHN 349 (427)
Q Consensus 270 ~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~ 349 (427)
.+.++.....+.++.+.|+...+. +.++++++.|+.|+. ||...+.. +. ..+|
T Consensus 250 ---~~~l~~~G~l~~~~~l~H~~~l~~-~~~~~l~~~g~~v~~--~P~sn~~l-----------~~---g~~~------- 302 (429)
T cd01303 250 ---LDVYDKYGLLTEKTVLAHCVHLSE-EEFNLLKERGASVAH--CPTSNLFL-----------GS---GLFD------- 302 (429)
T ss_pred ---HHHHHHCCCCCCCcEEEeCCCCCH-HHHHHHHHcCCEEEE--Cccchhhh-----------cc---CCCC-------
Confidence 011111122345778999987764 678889999987775 77532110 11 1234
Q ss_pred HHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHH-----hcCCCCHHHHHHHHchhhh
Q 014320 350 KALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV-----ESGQISVTDYVRLTSTEWG 424 (427)
Q Consensus 350 ~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~-----~~~~l~l~~~v~~~t~npA 424 (427)
+.++++.|+.+++|||+.+.+. .+.+ .+.++...+.+.. ....+++.++++++|.|||
T Consensus 303 --~~~~~~~Gv~v~lGtD~~~~~~-~d~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~aT~~gA 365 (429)
T cd01303 303 --VRKLLDAGIKVGLGTDVGGGTS-FSML--------------DTLRQAYKVSRLLGYELGGHAKLSPAEAFYLATLGGA 365 (429)
T ss_pred --HHHHHHCCCeEEEeccCCCCCC-ccHH--------------HHHHHHHHHHHhhccccCCcCCCCHHHHHHHHhhHHH
Confidence 4569999999999999753221 1110 1222222222211 1235899999999999999
Q ss_pred cC
Q 014320 425 RL 426 (427)
Q Consensus 425 ~~ 426 (427)
|.
T Consensus 366 ~~ 367 (429)
T cd01303 366 EA 367 (429)
T ss_pred HH
Confidence 84
No 54
>PRK10657 isoaspartyl dipeptidase; Provisional
Probab=99.95 E-value=3.1e-25 Score=217.94 Aligned_cols=313 Identities=18% Similarity=0.184 Sum_probs=184.4
Q ss_pred cEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCC---CCceEEeCCCCEEeccccccccccccCcCC-CCChhhHHH
Q 014320 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVG---DDVKVLDATGKFVMPGGIDPHTHLAMEFMG-SETIDDFFS 129 (427)
Q Consensus 54 ~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~---~~~~viD~~g~~v~PG~ID~H~H~~~~~~g-~~~~e~~~~ 129 (427)
+++|+|++|++++....++|+|+||+|++|++..+.+ .+.++||++|++|+|||||+|+|+...... .....+...
T Consensus 2 ~~~i~~~~v~~~~~~~~~~i~i~~g~I~~v~~~~~~~~~~~~~~~id~~g~~v~PG~id~H~H~~~~~~~~~~~~~t~~~ 81 (388)
T PRK10657 2 FTLLKNAHVYAPEDLGKKDILIAGGKIIAIADNINIPDIVPDIEVIDASGKILVPGFIDQHVHIIGGGGEGGFSTRTPEV 81 (388)
T ss_pred eEEEEccEEECCCCCcceEEEEECCEEEEecCCccccccCCCCeEEECCCCEEcccceeeeeCcccCCCCcccccCCHHH
Confidence 3789999999987666789999999999998753321 246899999999999999999998742100 011123345
Q ss_pred HHHHHHcCCceEEecCcCCCCC-cH----HHHHHHHHHHhccccceeceec-cccCCChhhHHHHHHHHHHcCCCeE-EE
Q 014320 130 GQAAALAGGTTMHIDFVIPING-SL----TAGFEAYEKKAKNSCMDYGFHM-AITKWDEVVSDEMEVMVKEKGINSF-KF 202 (427)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~g~~~i-k~ 202 (427)
.+++++++||||++|+...... .. .+..+...+.+.+.....+++. ......+...+++ .+. ..+.++ ++
T Consensus 82 ~~~~~~~~GvTTvvd~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~g~g~~ 158 (388)
T PRK10657 82 QLSDLTEAGITTVVGLLGTDGITRSMESLLAKARALEEEGISAYMYTGSYHVPVRTITGSIRKDI-VLI--DKVIGVGEI 158 (388)
T ss_pred HHHHHHhCCceEEECCCCCCCCCCCHHHHHHHHHHHHhhCCEEEEEecCCCCCchhhhcchhhce-ehh--hhhhCccee
Confidence 6788899999999998733221 11 2222222233333321111110 0000011111111 111 111223 55
Q ss_pred EEecCCCccCCHHHHHHHHHHHHHcCC------cEEEec-CChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHH
Q 014320 203 FMAYKGSFMINDELLIEGFKRCKSLGA------LAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRA 275 (427)
Q Consensus 203 ~~~~~~~~~~~~~~l~~~~~~a~~~g~------~v~~H~-e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~ 275 (427)
...++.....+++++.++.+.++..+. ++++|+ +.....+...+++++.|+...
T Consensus 159 ~~~~~~~~~~~~~~l~~~~~~a~~~~~~~g~~~~i~vH~~~~~~~l~~v~~~l~~~Gv~~~------------------- 219 (388)
T PRK10657 159 AISDHRSSQPTVEELARLAAEARVGGLLSGKAGIVHVHMGDGKKGLQPLFELLENTDIPIS------------------- 219 (388)
T ss_pred eeccCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEEEEeCCchHHHHHHHHHHHhcCCCcc-------------------
Confidence 555565566788899888888775544 789996 344444333334445554321
Q ss_pred HHHHHhcCCCEEEEcCCC-HHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCc---ccHHH
Q 014320 276 IRLAEFVNTPLYVVHVMS-MDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRAS---GHNKA 351 (427)
Q Consensus 276 ~~~~~~~g~~~~i~H~~~-~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~---~~~~~ 351 (427)
++...|+.. .+..+...++.++|..+.... +.||++.+ .+.+.
T Consensus 220 ---------~~~~~H~~~~~~~~~~~~~~~~~G~~~~v~~------------------------~~~~~~~~~~~~~~~~ 266 (388)
T PRK10657 220 ---------QFLPTHVNRNEPLFEQALEFAKKGGVIDLTT------------------------SDPDFLGEGEVAPAEA 266 (388)
T ss_pred ---------eeeCcccCCCHHHHHHHHHHHHcCCeEEEec------------------------CCCcccccCccCHHHH
Confidence 234556543 121233444444565443321 12333333 23478
Q ss_pred HHHHHhcCC---ceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 352 LQAALATGI---LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 352 l~~~l~~G~---~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+|+++++|. .+.++||+.+..+.... ++. ..+.|..+.++.+..+. ..+...+++++++++++|.||||+
T Consensus 267 l~~~~~~G~~~d~v~l~tD~~~~~~~~~~--~g~--~~~~g~~~~~~l~~~~~-~~~~~~gis~~~~l~~aT~npA~~ 339 (388)
T PRK10657 267 LKRALEAGVPLSRVTLSSDGNGSLPKFDE--DGN--LVGLGVGSVESLLEEVR-ELVKDEGLPLEDALKPLTSNVARF 339 (388)
T ss_pred HHHHHHcCCChhheEEECCCCCCCceecc--CCC--EeccCcCchhhHHHHHH-HHHHhcCCCHHHHHHHHHHHHHHH
Confidence 999999998 56999998544321110 011 14678888887777766 556567899999999999999985
No 55
>PRK06151 N-ethylammeline chlorohydrolase; Provisional
Probab=99.95 E-value=2e-25 Score=224.71 Aligned_cols=309 Identities=17% Similarity=0.141 Sum_probs=188.3
Q ss_pred cEEEECcEEEcCCC-----ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccC-----c-----
Q 014320 54 KILIKGGTVVNAHH-----QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAME-----F----- 118 (427)
Q Consensus 54 ~~~i~~~~i~~~~~-----~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~-----~----- 118 (427)
.++|+|+.|++.++ .++++|+|+||+|++||+.... .+.++||++|++|||||||+|+|+... .
T Consensus 2 ~~li~~~~v~~~d~~~~~~~~~~~VlVe~g~I~~Vg~~~~~-~~~~viD~~g~~vlPGlVdaH~Hl~~~~~~~~~~~~~~ 80 (488)
T PRK06151 2 RTLIKARWVLGFDDGDHRLLRDGEVVFEGDRILFVGHRFDG-EVDRVIDAGNALVGPGFIDLDALSDLDTTILGLDNGPG 80 (488)
T ss_pred eEEEEccEEEEEcCCCCeEEeCcEEEEECCEEEEecCCCCC-CCCeEEeCCCCEEecCEEeeecccchhhhhcccccchh
Confidence 36899999976442 3578999999999999985432 245799999999999999999997421 0
Q ss_pred --CC--------------CCChhhHH----HHHHHHHcCCceEEecCcCCCC---C----cHHHHHHHHHHHhcccccee
Q 014320 119 --MG--------------SETIDDFF----SGQAAALAGGTTMHIDFVIPIN---G----SLTAGFEAYEKKAKNSCMDY 171 (427)
Q Consensus 119 --~g--------------~~~~e~~~----~~~~~~l~~GvTtv~d~~~~~~---~----~~~~~~~~~~~~~~~~~~~~ 171 (427)
.+ ..++++.+ .+...++++||||++|+..... . ...+.++...+.+.+..+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~t~e~~~~~a~~~~~e~L~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~a~~~~GiR~~~~~ 160 (488)
T PRK06151 81 WAKGRVWSRDYVEAGRREMYTPEELAFQKRYAFAQLLRNGITTAMPIASLFYRQWAETYAEFAAAAEAAGRLGLRVYLGP 160 (488)
T ss_pred HHhcccCchhhhhcchhhcCCHHHHHHHHHHHHHHHHhcCeeEEehhhhhhccccccccchHHHHHHHHHHcCCeEEecc
Confidence 00 12233333 2345679999999998743111 1 13444555566665532221
Q ss_pred ceecc------------cc--CCChhhHHHHHHHHH---HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEe
Q 014320 172 GFHMA------------IT--KWDEVVSDEMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH 234 (427)
Q Consensus 172 ~~~~~------------~~--~~~~~~~~~~~~l~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H 234 (427)
.+... .. ....+.+.+..++++ ..|.+.+|..+.++..+.+++++++++++.|+++|+++++|
T Consensus 161 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~i~~~~~p~~~~~~s~e~l~~~~~~A~~~g~~v~~H 240 (488)
T PRK06151 161 AYRSGGSVLEADGSLEVVFDEARGLAGLEEAIAFIKRVDGAHNGLVRGMLAPDRIETCTVDLLRRTAAAARELGCPVRLH 240 (488)
T ss_pred hhccCccccccCCCCCccccchhHHHHHHHHHHHHHHhhcccCCceEEEEcCCCCCCCCHHHHHHHHHHHHHCCCcEEEE
Confidence 11100 00 001122333444332 24667799988888888899999999999999999999999
Q ss_pred c-CChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHH--------HHHHHHHhh
Q 014320 235 A-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDA--------MEEIAKARK 305 (427)
Q Consensus 235 ~-e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~--------~~~i~~~~~ 305 (427)
+ ++..++....+ ..|.. .+ +.+......+.++.+.|+...+. .+.++++++
T Consensus 241 ~~e~~~~~~~~~~---~~g~~----------------~~-~~~~~~g~l~~r~~l~H~~~l~~~~~~~~~~~~~~~~la~ 300 (488)
T PRK06151 241 CAQGVLEVETVRR---LHGTT----------------PL-EWLADVGLLGPRLLIPHATYISGSPRLNYSGGDDLALLAE 300 (488)
T ss_pred ECCchHHHHHHHH---HcCCC----------------HH-HHHHHcCCCCCCcEEEEEEEcCCccccccCCHHHHHHHHh
Confidence 8 66655433322 12211 00 01111122345667777765442 167888889
Q ss_pred cCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCcc
Q 014320 306 AGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRK 385 (427)
Q Consensus 306 ~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~ 385 (427)
.|+.+++ ||.... ..|. ..+| +.++++.|+.+++|||..|.+.-.
T Consensus 301 ~g~~v~~--~P~~~~-----------~~g~---~~~p---------~~~l~~~Gv~v~lGtD~~~~~~~~---------- 345 (488)
T PRK06151 301 HGVSIVH--CPLVSA-----------RHGS---ALNS---------FDRYREAGINLALGTDTFPPDMVM---------- 345 (488)
T ss_pred cCCEEEE--Cchhhh-----------hhcc---cccc---------HHHHHHCCCcEEEECCCCCccHHH----------
Confidence 9987765 664211 0011 1233 456889999999999974422111
Q ss_pred CCCCCchhhHhHHHHHHHHHh--cCCCCHHHHHHHHchhhhcC
Q 014320 386 IPNGVNGIEERMHLVWDTMVE--SGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 386 ~~~G~~~~e~~l~~~~~~~~~--~~~l~l~~~v~~~t~npA~~ 426 (427)
+......+..... ...+++.++++++|.|||++
T Consensus 346 --------~~~~~~~~~~~~~~~~~~~~~~~al~~aT~~~A~~ 380 (488)
T PRK06151 346 --------NMRVGLILGRVVEGDLDAASAADLFDAATLGGARA 380 (488)
T ss_pred --------HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHH
Confidence 1122222222222 23489999999999999974
No 56
>PRK08393 N-ethylammeline chlorohydrolase; Provisional
Probab=99.94 E-value=5.9e-25 Score=217.84 Aligned_cols=308 Identities=22% Similarity=0.283 Sum_probs=191.7
Q ss_pred cEEEECcEEEcCCC--ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcC-C----------
Q 014320 54 KILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G---------- 120 (427)
Q Consensus 54 ~~~i~~~~i~~~~~--~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g---------- 120 (427)
+++|+|++|++++. ..+++|+|+||+|++|++.... ++.++||+.|++|+|||||+|+|+.+... +
T Consensus 2 ~~~i~~~~i~~~~~~~~~~~~i~i~~g~I~~v~~~~~~-~~~~~id~~~~~v~Pg~vd~H~H~~~~~~rg~~~~~~l~~~ 80 (424)
T PRK08393 2 SILIKNGYVIYGENLKVIRADVLIEGNKIVEVKRNINK-PADTVIDASGSVVSPGFINAHTHSPMVLLRGLADDVPLMEW 80 (424)
T ss_pred eEEEECcEEEeCCCCceecceEEEECCEEEEecCCCCC-CCCeEEeCCCCEEccCeeeeccCcchHhhhhccCCCCHHHH
Confidence 47999999999876 3468899999999999975433 34579999999999999999999876311 0
Q ss_pred ----------CCChhhHHH----HHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceecc-ccCCChhhH
Q 014320 121 ----------SETIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMA-ITKWDEVVS 185 (427)
Q Consensus 121 ----------~~~~e~~~~----~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 185 (427)
..++++++. +...++++||||+.|+.. ...+.++...+.+.+..+.++.... ......+.+
T Consensus 81 l~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~GvTtv~d~~~----~~~~~~~a~~~~G~r~~~~~~~~~~~~~~~~~~~l 156 (424)
T PRK08393 81 LQNYIWPRERKLKRKDIYWGAYLGLLEMIKSGTTTFVDMYF----HMEEVAKATLEVGLRGYLSYGMVDLGDEEKREKEI 156 (424)
T ss_pred HHhhhccccccCCHHHHHHHHHHHHHHHHhcCceEEecccc----CHHHHHHHHHHhCCeEEEeceEecCCCccchHHHH
Confidence 012333332 345568999999999853 2345556666666665544432211 011112223
Q ss_pred HHHHHHHH---HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcCCCCcccccc
Q 014320 186 DEMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPEGHAL 261 (427)
Q Consensus 186 ~~~~~l~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~~~~~ 261 (427)
++..+..+ ..+...+...+.++.++.++++.++++++.|+++|+++++|+ |+..++....+. .|..
T Consensus 157 ~~~~~~~~~~~~~~~~~v~~~~~p~~~~~~s~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~---~g~~------- 226 (424)
T PRK08393 157 KETEKLMEFIEKLNSPRVHFVFGPHAPYTCSLALLKWVREKAREWNKLITIHLSETMDEIKQIREK---YGKS------- 226 (424)
T ss_pred HHHHHHHHHHhcCCCCceEEEEeCCcCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHH---hCcC-------
Confidence 33333332 123334666677888888999999999999999999999997 666655443321 1210
Q ss_pred cCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcC
Q 014320 262 SRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSP 341 (427)
Q Consensus 262 ~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~p 341 (427)
| + +.++.....+.++.+.|+..... +.++++++.|+.+.+ ||..... .+.. .+
T Consensus 227 --~-------~-~~l~~~G~l~~~~~~~H~~~l~~-~~l~~la~~g~~v~~--~P~sn~~-----------lg~g---~~ 279 (424)
T PRK08393 227 --P-------V-VLLDEIGFLNEDVIAAHGVWLSS-RDIRILASAGVTVAH--NPASNMK-----------LGSG---VM 279 (424)
T ss_pred --H-------H-HHHHHcCCCCCCcEEEEeecCCH-HHHHHHHhcCCEEEE--CHHHHHh-----------hccC---CC
Confidence 0 0 11122222345666888876554 678888899987765 7742111 0111 23
Q ss_pred CCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHh--cCCCCHHHHHHHH
Q 014320 342 PIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVE--SGQISVTDYVRLT 419 (427)
Q Consensus 342 plr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~--~~~l~l~~~v~~~ 419 (427)
| +.++++.|+.+++|||..+.+...+.. .+.++..++..... ...+++.++++++
T Consensus 280 ~---------~~~~~~~Gv~v~lGtD~~~~~~~~d~~--------------~~~~~a~~~~~~~~~~~~~~~~~~al~~a 336 (424)
T PRK08393 280 P---------LRKLLNAGVNVALGTDGAASNNNLDML--------------REMKLAALLHKVHNLDPTIADAETVFRMA 336 (424)
T ss_pred C---------HHHHHHCCCcEEEecCCCccCCchhHH--------------HHHHHHHHHHhhccCCCCcCCHHHHHHHH
Confidence 4 455889999999999974322211111 13333333322211 1246889999999
Q ss_pred chhhhcC
Q 014320 420 STEWGRL 426 (427)
Q Consensus 420 t~npA~~ 426 (427)
|.|||+.
T Consensus 337 T~~~A~~ 343 (424)
T PRK08393 337 TQNGAKA 343 (424)
T ss_pred HHHHHHH
Confidence 9999984
No 57
>COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=99.94 E-value=3.7e-26 Score=226.25 Aligned_cols=323 Identities=19% Similarity=0.235 Sum_probs=201.2
Q ss_pred CCccEEEECcEEEcCCC--ceeeeEEEeCCeEEEeeCCCCC----CCCceEEeCCCCEEeccccccccccccCcC-----
Q 014320 51 SSSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINV----GDDVKVLDATGKFVMPGGIDPHTHLAMEFM----- 119 (427)
Q Consensus 51 ~~~~~~i~~~~i~~~~~--~~~~~i~i~~g~I~~vg~~~~~----~~~~~viD~~g~~v~PG~ID~H~H~~~~~~----- 119 (427)
|..+++++||+|++.+. .....|+|+||||++||+..+. .+.+++||++|++|+|||||+|.|+...-.
T Consensus 3 ~~adlil~nG~i~T~~~~~p~aeAvaI~dGrI~avG~~~~~~~~~~~~t~viDL~Gk~v~PGfvDaH~Hl~~~G~~~~~~ 82 (535)
T COG1574 3 MAADLILHNGRIYTMDEARPTAEAVAIKDGRIVAVGSDAELKALAGPATEVIDLKGKFVLPGFVDAHLHLISGGLSLLEL 82 (535)
T ss_pred cccceeEECCEEEeccCCCcceeEEEEcCCEEEEEcChHHHHhhcCCCceEEeCCCCEeccccchhhHHHHHhhhhhhcc
Confidence 36789999999999886 3568999999999999987432 256899999999999999999999755200
Q ss_pred -------------------------------------------------------------------------------C
Q 014320 120 -------------------------------------------------------------------------------G 120 (427)
Q Consensus 120 -------------------------------------------------------------------------------g 120 (427)
|
T Consensus 83 ~~~~~~~~~~~~~~i~~~a~~~~~~~w~~~vG~g~~~~~~~~~~~t~~~lD~~~~~~Pv~l~r~~~H~a~~Ns~aL~~~G 162 (535)
T COG1574 83 NLDGVRSLDDLLAALRRQAARTPPGQWVVVVGWGWDEQFWEERLPTLAELDAAAPDHPVLLIRLDGHVAVANSAALRLAG 162 (535)
T ss_pred cccccCCHHHHHHHHHHHHHhCCCCCceEEEEcChhhhccccCCCcHHHhhccCCCCCEEEEeccChHHHHhHHHHHHcC
Confidence 0
Q ss_pred CC--------------------------------------ChhhHH----H-HHHHHHcCCceEEecCcCCCCCcHHHHH
Q 014320 121 SE--------------------------------------TIDDFF----S-GQAAALAGGTTMHIDFVIPINGSLTAGF 157 (427)
Q Consensus 121 ~~--------------------------------------~~e~~~----~-~~~~~l~~GvTtv~d~~~~~~~~~~~~~ 157 (427)
.. .++... . +.+...+.|||++.|+.. . ......+
T Consensus 163 i~~~t~~p~gg~~~~d~~g~ptG~L~e~a~~~~~~~~~~~~~~~~~~~~~~~a~~~l~s~GiT~v~d~~~-~-~~~~~~~ 240 (535)
T COG1574 163 ITRDTPDPPGGIIGRDADGEPTGLLLENAQALVARLAPPPSPAEELEAAAARAARELNSLGITGVHDMAG-Y-QGYYADY 240 (535)
T ss_pred CCCCCCCCCCCcccccCCCCCCeeehHhhHHHHHHhcCCCCchHHHHHHHHHHHHHHHhcCCeEEEcccc-c-ccchhHH
Confidence 00 000000 0 233557899999999875 2 2233334
Q ss_pred HHHHHHhccccceeceeccccCCChhhHHHHHHHHHH------cCCCeEEEEEec-------------------CCCccC
Q 014320 158 EAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKE------KGINSFKFFMAY-------------------KGSFMI 212 (427)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------~g~~~ik~~~~~-------------------~~~~~~ 212 (427)
+.++.......+.+.+......... .++......+ .....+|+|.+. .|.+.+
T Consensus 241 ~~~r~~~~~~~l~~rv~~~l~~~~~--~~~~~~~~~~~~~~~~~~~g~~K~f~Dgslg~rtA~l~~~y~d~~~~~G~~l~ 318 (535)
T COG1574 241 EAYRALAAGGELPVRVALLLFTEDL--KEERLDLLRQTGAKGLLQGGGVKLFADGSLGERTALLAAPYADGPGPSGELLL 318 (535)
T ss_pred HHHHHHHhcCcceEEEEeeccccch--hhHHHhhcccCCccceeecCceEEEEeCCCCcchhhccCcccCCCCCCCCccc
Confidence 4444443322222222211111111 1111111111 223456777762 145567
Q ss_pred CHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 213 NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 213 ~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
++++|.++++.+.++|+++.+|+.++..++..++.++ +........+.+..+.|++
T Consensus 319 ~~e~l~~~v~~a~~~gl~v~vHAiGD~Av~~~LdafE------------------------~~~~~~~~~~~r~rieH~~ 374 (535)
T COG1574 319 TEEELEELVRAADERGLPVAVHAIGDGAVDAALDAFE------------------------KARKKNGLKGLRHRIEHAE 374 (535)
T ss_pred CHHHHHHHHHHHHHCCCcEEEEEechHHHHHHHHHHH------------------------HHhhhcCCccCCceeeeee
Confidence 8999999999999999999999999988876654333 2222222346788999999
Q ss_pred CHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCC
Q 014320 293 SMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFN 372 (427)
Q Consensus 293 ~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~ 372 (427)
.... ++++++++.| +++.++|++++.....+.+ .++ ..+...++|+++ +++.|+.++.|||. |..
T Consensus 375 ~v~~-~~i~R~~~Lg--v~~svQP~f~~~~~~~~~~-rlG-~~r~~~~~p~~~---------ll~~G~~la~gSD~-Pv~ 439 (535)
T COG1574 375 LVSP-DQIERFAKLG--VIASVQPNFLFSDGEWYVD-RLG-EERASRSYPFRS---------LLKAGVPLAGGSDA-PVE 439 (535)
T ss_pred ecCH-hHHHHHHhcC--ceEeeccccccccchHHHH-hhh-hhhhhccCcHHH---------HHHCCCeEeccCCC-CCC
Confidence 8875 7889998877 5777899888765433321 111 245666777765 99999999999996 553
Q ss_pred hhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 373 STQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 373 ~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+.+. +.. +....++-..--.....+..||++++++++|.|+|..
T Consensus 440 ~~dP------~~~----i~~AVtr~~~~g~~~~~~~~L~~~eAL~~yT~~~A~a 483 (535)
T COG1574 440 PYDP------WLG----IYAAVTRKTPGGRVLGPEERLTREEALRAYTEGGAYA 483 (535)
T ss_pred CCCh------HHH----HHHHHcCCCCCCCCCccccccCHHHHHHHHhhhhHHh
Confidence 3221 111 1111111100000000012699999999999999964
No 58
>PRK14085 imidazolonepropionase; Provisional
Probab=99.94 E-value=1.5e-24 Score=212.21 Aligned_cols=289 Identities=18% Similarity=0.142 Sum_probs=176.4
Q ss_pred cEEEEC-cEEEcCCC---------ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcC-C--
Q 014320 54 KILIKG-GTVVNAHH---------QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G-- 120 (427)
Q Consensus 54 ~~~i~~-~~i~~~~~---------~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g-- 120 (427)
+++|+| +.|++.+. .+++.|+|+||||++|++..+.+.+.++||++|++|||||||+|+|+..... +
T Consensus 2 ~~l~~~~~~i~~~~~~~~~~~~~~~~~~~v~i~~g~I~~Vg~~~~~~~~~~~iD~~g~~v~PGlId~H~Hl~~~~~r~~~ 81 (382)
T PRK14085 2 STLITNIGELVTNDPELGEGPLGVLRDAAVVVEGGRVAWVGPAADAPAADERVDAGGRAVLPGFVDSHSHLVFAGDRSAE 81 (382)
T ss_pred cEEEEcccEEEcCCCcccCCCcccccCcEEEEECCEEEEEcCCccCCCCCeEEeCCCCEEecCeEecCcCccccCChhHH
Confidence 478999 59998652 3568999999999999986544456789999999999999999999965311 0
Q ss_pred -----------------------CCChhhHHH----HHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccce---
Q 014320 121 -----------------------SETIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMD--- 170 (427)
Q Consensus 121 -----------------------~~~~e~~~~----~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~--- 170 (427)
..+.++.+. ..+.++++||||++|+..... ...+.++..+..+ +....
T Consensus 82 ~~~~~~~~~~~~~~i~~~~~~~~~~t~e~~~~~a~~~~~~~l~~G~Ttv~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~ 159 (382)
T PRK14085 82 FAARMAGEPYSAGGIRTTVAATRAASDEELRANVRRLVAEALRQGTTTVETKTGYGL-TVEDEARSARIAA-EFTDEVTF 159 (382)
T ss_pred HHhhhcCCCccCCChHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCceEEEcCCcCCC-CHHHHHHHHHHHH-Hhhhccee
Confidence 012233332 345679999999999753321 2333343333222 11111
Q ss_pred eceec-cc--cCCChhhHHHH----HHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHH
Q 014320 171 YGFHM-AI--TKWDEVVSDEM----EVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFE 243 (427)
Q Consensus 171 ~~~~~-~~--~~~~~~~~~~~----~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~ 243 (427)
.+.+. +. ....++.++.+ ...+ ...++.+|++.+.. ..+.++++++++.|+++|+++.+|+.+.... .
T Consensus 160 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~idi~~~~~---~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~-~ 234 (382)
T PRK14085 160 LGAHVVPPEYAGDADEYVDLVCGPMLDAV-APHARWIDVFCERG---AFDEDQSRRVLTAGRAAGLGLRVHGNQLGPG-P 234 (382)
T ss_pred eccccCCcccCCCHHHHHHHHHHHHHHHH-HHhCCeEEEEecCC---CCCHHHHHHHHHHHHHcCCCeEEEeCcccCC-h
Confidence 11111 10 01111222222 2333 34577788887532 4688999999999999999999998542110 0
Q ss_pred HHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCc
Q 014320 244 GQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDD 323 (427)
Q Consensus 244 ~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~ 323 (427)
..+.+.+. |. ..+.|+...+. +.++++++.|+.++ .||.+.+...
T Consensus 235 ~v~~~~~~-------------------------------g~-~~i~H~~~l~~-~~~~~la~~gv~~~--~~P~~~~~~~ 279 (382)
T PRK14085 235 GVRLAVEL-------------------------------GA-ASVDHCTYLTD-ADVDALAGSGTVAT--LLPGAEFSTR 279 (382)
T ss_pred HHHHHHHc-------------------------------CC-CcHHHhCCCCH-HHHHHHHHcCCEEE--ECcHHHHhcC
Confidence 01112222 22 23667766554 67888888886544 4776322100
Q ss_pred ccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHH
Q 014320 324 SWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDT 403 (427)
Q Consensus 324 ~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~ 403 (427)
.. .+ .++++++.|+.+++|||+.|+.+... .++..+..
T Consensus 280 -----------~~---~~---------~~~~l~~aGv~v~lgsD~~~~~~~~~-------------------~~~~~~~~ 317 (382)
T PRK14085 280 -----------QP---YP---------DARRLLDAGVTVALASDCNPGSSYTS-------------------SMPFCVAL 317 (382)
T ss_pred -----------CC---Cc---------hHHHHHHCCCcEEEEeCCCCCCChHH-------------------HHHHHHHH
Confidence 00 12 36679999999999999855432111 11222212
Q ss_pred HHhcCCCCHHHHHHHHchhhhcC
Q 014320 404 MVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 404 ~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
.+...+++++++++++|.|||+.
T Consensus 318 ~~~~~~l~~~~al~~aT~~~A~~ 340 (382)
T PRK14085 318 AVRQMGMTPAEAVWAATAGGARA 340 (382)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHH
Confidence 33456799999999999999974
No 59
>TIGR01975 isoAsp_dipep isoaspartyl dipeptidase IadA. The L-isoaspartyl derivative of Asp arises non-enzymatically over time as a form of protein damage. In this isomerization, the connectivity of the polypeptide changes to pass through the beta-carboxyl of the side chain. Much but not all of this damage can be repaired by protein-L-isoaspartate (D-aspartate) O-methyltransferase. This model describes the isoaspartyl dipeptidase IadA, apparently one of two such enzymes in E. coli, an enzyme that degrades isoaspartyl dipeptides and may unblock degradation of proteins that cannot be repaired. This model also describes closely related proteins from other species (e.g. Clostridium perfringens, Thermoanaerobacter tengcongensis) that we assume to be equivalent in function. This family shows homology to dihydroorotases.
Probab=99.94 E-value=2.5e-24 Score=208.54 Aligned_cols=312 Identities=17% Similarity=0.144 Sum_probs=189.1
Q ss_pred EEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCC----CCceEEeCCCCEEeccccccccccccCcC-CCCChhhHHH
Q 014320 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVG----DDVKVLDATGKFVMPGGIDPHTHLAMEFM-GSETIDDFFS 129 (427)
Q Consensus 55 ~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~----~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g~~~~e~~~~ 129 (427)
++|+|++|++++.....+|+|+||||++|++..+.+ ....++|++|++|+|||||+|+|+..... +.........
T Consensus 2 ~li~n~~v~~~~~~~~~dvlI~~gkI~~Ig~~~~~~~~~~~~~~i~d~~G~~v~PGlID~HvH~~~gg~~~~~~~~~~e~ 81 (389)
T TIGR01975 2 TLLKGAEVYAPEYIGKKDILIANDKIIAIADEIPSTKDFVPNCVVVGLEGMIAVPGFIDQHVHIIGGGGEGGPTTRTPEL 81 (389)
T ss_pred EEEECcEEEcCCcCcceeEEEECCEEEEEcCCccccccCCCCeEEECCCCCEEccCEeehhhccccccccCCCccCCHHH
Confidence 589999999987666789999999999999875432 22335566999999999999999876310 1110011223
Q ss_pred HHHHHHcCCceEEecCcCCCCC-----cHHHHHHHHHHHhccccceecee-ccccCCChhhHHHHHHHHHHcCCCeEE-E
Q 014320 130 GQAAALAGGTTMHIDFVIPING-----SLTAGFEAYEKKAKNSCMDYGFH-MAITKWDEVVSDEMEVMVKEKGINSFK-F 202 (427)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~g~~~ik-~ 202 (427)
.+..++++||||++|+...... ...+..+.+.+.+.+.++..+.. .+....+.....++.. ...+.++| +
T Consensus 82 ~~~e~l~~GvTTv~d~~g~~~~~~~~~~~~a~~~al~~~Gir~~~~~g~~~~p~~t~t~~~~~d~~~---~d~iiG~~~i 158 (389)
T TIGR01975 82 TLSDITKGGVTTVVGLLGTDGITRHMESLLAKARALEEEGISCYMLTGAYHVPSRTITGSVESDLLL---IDKVIGVGEI 158 (389)
T ss_pred HHHHHHhCCcEEEecCcccCccccChhhHHHHHHHHHHhCCEEEEEcccccCCCcccccchhhheee---ehhhcccceE
Confidence 5778899999999998643221 23345566666665544433322 1111122222222221 23455774 8
Q ss_pred EEecCCCccCCHHHHHHHHHHHHHcC----Cc--EEEecC-ChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHH
Q 014320 203 FMAYKGSFMINDELLIEGFKRCKSLG----AL--AMVHAE-NGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRA 275 (427)
Q Consensus 203 ~~~~~~~~~~~~~~l~~~~~~a~~~g----~~--v~~H~e-~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~ 275 (427)
.++.+.....+.++|.++.+.++..| ++ +++|.- .+..++...+
T Consensus 159 a~sd~r~~~~~~~~l~~~~~~~~~~g~~~~~~g~~~vH~g~~~~~l~~l~~----------------------------- 209 (389)
T TIGR01975 159 AISDHRSAQPTVEHLTNMAAEARVGGLLGGKPGIVNFHVGDSKRALQPIYE----------------------------- 209 (389)
T ss_pred EEccCcCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCchhhHHHHHH-----------------------------
Confidence 88887777789999999999999998 88 999974 4444433333
Q ss_pred HHHHHhcCCCEEEE---cCC-CHHHHHHHHHHhhcCCCEEEecCcc-ceeeCcccccCCCcccCceeEEcCCCCCcccHH
Q 014320 276 IRLAEFVNTPLYVV---HVM-SMDAMEEIAKARKAGQRVIGEPVVS-GLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNK 350 (427)
Q Consensus 276 ~~~~~~~g~~~~i~---H~~-~~~~~~~i~~~~~~G~~v~~~~~p~-~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~ 350 (427)
+.++.+.+.|.- |+. +..-++..-++.++|..+-.. .|- ..++.. ......+
T Consensus 210 --~~~~~di~~~~f~pth~~r~~~l~~~~i~~~~~gg~iDv~-~~~~~~~l~~--------------------~~~~~~~ 266 (389)
T TIGR01975 210 --LVENTDVPITQFLPTHINRNVPLFEAGLEFAKKGGTIDLT-SSIDPQFRKE--------------------GEVAPAE 266 (389)
T ss_pred --HHHhcCCChhheecCccCCCHHHHHHHHHHHHhCCcEEEe-CCCCccchhc--------------------cccChHH
Confidence 333333332222 332 222233333344455444432 221 000000 0011235
Q ss_pred HHHHHHhcCCc---eEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 351 ALQAALATGIL---QLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 351 ~l~~~l~~G~~---~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
.+..++++|+. ++++||+....+..+. +-.....|+.+.+..+..+. .++..++++++++++++|.|||++
T Consensus 267 ~~~~~~~~Gv~~~~i~isSD~~gs~p~~~~----~g~~~~~g~g~~~sl~~~~~-~lv~~g~ls~~eal~~~T~npA~~ 340 (389)
T TIGR01975 267 GIKKALEAGVPLEKVTFSSDGNGSQPFFDE----NGELTGLGVGSFETLFEEVR-EAVKDGDVPLEKALRVITSNVAGV 340 (389)
T ss_pred HHHHHHHcCCCcceEEEEeCCCCCCCcccc----ccccccCCcCcHHHHHHHHH-HHHHhCCCCHHHHHHHHHHHHHHH
Confidence 67889999986 4999997422111110 11223567888776665554 667778899999999999999985
No 60
>cd01293 Bact_CD Bacterial cytosine deaminase and related metal-dependent hydrolases. Cytosine deaminases (CDs) catalyze the deamination of cytosine, producing uracil and ammonia. They play an important role in pyrimidine salvage. CDs are present in prokaryotes and fungi, but not mammalian cells. The bacterial enzymes, but not the fungal enzymes, are related to the adenosine deaminases (ADA). The bacterial enzymes are iron dependent and hexameric.
Probab=99.94 E-value=1.7e-24 Score=213.65 Aligned_cols=267 Identities=19% Similarity=0.179 Sum_probs=156.5
Q ss_pred EECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCC---------------
Q 014320 57 IKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS--------------- 121 (427)
Q Consensus 57 i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~--------------- 121 (427)
|+|++|+++. ..+++|+|+||+|++||+..+.+++.++||++|++|+|||||+|+|+.+.+...
T Consensus 2 ~~~~~~~~~~-~~~~~v~I~~g~I~~Vg~~~~~~~~~~vID~~g~~v~PGlId~H~H~~~~~~~~~~~~~~~~~~~~~~~ 80 (398)
T cd01293 2 LRNARLADGG-TALVDIAIEDGRIAAIGPALAVPPDAEEVDAKGRLVLPAFVDPHIHLDKTFTGGRWPNNSGGTLLEAII 80 (398)
T ss_pred eeeeEEeCCC-ceEEEEEEECCEEEEEecCCCCCCCCceEeCCCCEEccCEeeeeeccCcccccCCCCCCCccccHHHHH
Confidence 7899999974 577899999999999998755455678999999999999999999997642110
Q ss_pred --------CChhhHH----HHHHHHHcCCceEEecCcCCCCC---cHHHH-HHHHHHHhccccceeceeccccCC-Chhh
Q 014320 122 --------ETIDDFF----SGQAAALAGGTTMHIDFVIPING---SLTAG-FEAYEKKAKNSCMDYGFHMAITKW-DEVV 184 (427)
Q Consensus 122 --------~~~e~~~----~~~~~~l~~GvTtv~d~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 184 (427)
.++++++ .....++++||||++++...... ...+. .+...+.+.+.............. .++.
T Consensus 81 ~~~~~~~~~t~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (398)
T cd01293 81 AWEERKLLLTAEDVKERAERALELAIAHGTTAIRTHVDVDPAAGLKALEALLELREEWADLIDLQIVAFPQHGLLSTPGG 160 (398)
T ss_pred HHHHHHhccChHHHHHHHHHHHHHHHHcChhheeeeecccccccchHHHHHHHHHHHhhccceEEEEeccCccccCCCCH
Confidence 1222222 23456799999999886532211 11112 222122211111111000000001 1333
Q ss_pred HHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcCCCCcccccccC
Q 014320 185 SDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSR 263 (427)
Q Consensus 185 ~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~~~~~~~ 263 (427)
.+.+++.. +.|...++. ..+.....+++++++++++.|+++|+++++|+ +......
T Consensus 161 ~~~v~~~~-~~g~~~~~~-~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~--------------------- 217 (398)
T cd01293 161 EELMREAL-KMGADVVGG-IPPAEIDEDGEESLDTLFELAQEHGLDIDLHLDETDDPGS--------------------- 217 (398)
T ss_pred HHHHHHHH-HhCCCEEeC-CCCCcCCccHHHHHHHHHHHHHHhCCCCEEEeCCCCCcch---------------------
Confidence 44455554 455543432 22222345688999999999999999999997 4432211
Q ss_pred CHHHHHHHHHHHHHHHHhcC--CCEEEEcCCCHH------HHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCc
Q 014320 264 PPLLEGEATTRAIRLAEFVN--TPLYVVHVMSMD------AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAA 335 (427)
Q Consensus 264 p~~~e~~a~~~~~~~~~~~g--~~~~i~H~~~~~------~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~ 335 (427)
..+...++.+.+.| .++.+.|+.... ..+.+++++++|+.+++ ||.......... . .
T Consensus 218 ------~~~~~~~~~~~~~g~~~~~~i~H~~~~~~~~~~~~~~~~~~l~~~g~~v~~--~p~s~~~l~~~~-~-~----- 282 (398)
T cd01293 218 ------RTLEELAEEAERRGMQGRVTCSHATALGSLPEAEVSRLADLLAEAGISVVS--LPPINLYLQGRE-D-T----- 282 (398)
T ss_pred ------hHHHHHHHHHHHhCCCCCEEeeecchhhcCCHHHHHHHHHHHHHcCCeEEe--CCCcchhhcccc-c-C-----
Confidence 11112223333333 257788987543 13668999999988776 664322110000 0 0
Q ss_pred eeEEcCCCCCcccHHHHHHHHhcCCceEEecCCC
Q 014320 336 KYVMSPPIRASGHNKALQAALATGILQLVGTDHC 369 (427)
Q Consensus 336 ~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~ 369 (427)
.|. ......+.++++.|+.+++|||+.
T Consensus 283 ----~~~---~~~~~~~~~~~~~Gv~v~lGTD~~ 309 (398)
T cd01293 283 ----TPK---RRGVTPVKELRAAGVNVALGSDNV 309 (398)
T ss_pred ----CCC---CCCCCcHHHHHHCCCeEEECCCCC
Confidence 000 011234677999999999999974
No 61
>cd01308 Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid. Formation of this bond is a spontaneous nonenzymatic reaction in nature and can profoundly effect the function of the protein. Isoaspartyl dipeptidase is an octameric enzyme that contains a binuclear zinc center in the active site of each subunit and shows a strong preference of hydrolyzing Asp-Leu dipeptides.
Probab=99.93 E-value=7.3e-24 Score=208.13 Aligned_cols=310 Identities=18% Similarity=0.160 Sum_probs=176.9
Q ss_pred EEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCC--CCceEEeCCCCEEeccccccccccccCcCC-CCChhhHHHHH
Q 014320 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVG--DDVKVLDATGKFVMPGGIDPHTHLAMEFMG-SETIDDFFSGQ 131 (427)
Q Consensus 55 ~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~--~~~~viD~~g~~v~PG~ID~H~H~~~~~~g-~~~~e~~~~~~ 131 (427)
++|+|++|++++...+++|+|+||+|++|++....+ .+.++||++|++|+|||||+|+|+...... .....+.....
T Consensus 2 ~~i~~~~v~~~~~~~~~~v~i~~g~I~~v~~~~~~~~~~~~~~id~~g~~v~PG~id~H~H~~~~~~~~~~~~~~~~~~~ 81 (387)
T cd01308 2 TLIKNAEVYAPEYLGKKDILIAGGKILAIEDQLNLPGYENVTVVDLHGKILVPGFIDQHVHIIGGGGEGGPSTRTPEVTL 81 (387)
T ss_pred EEEECcEEeCCCCccceEEEEECCEEEEEeCCcccccCCCCeEEECCCCEEccCeeehhhCcccccCCCcccccCHHHHH
Confidence 479999999977667889999999999999865332 356899999999999999999998653100 00112222345
Q ss_pred HHHHcCCceEEecCcCCCCC--c---HHHHHHHHHHHhccccceeceeccccCCChhhH-HHHHHHHHHcCCCeEEEEE-
Q 014320 132 AAALAGGTTMHIDFVIPING--S---LTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVS-DEMEVMVKEKGINSFKFFM- 204 (427)
Q Consensus 132 ~~~l~~GvTtv~d~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~g~~~ik~~~- 204 (427)
..++++|+||++|+....+. . ..+..+...+.+.+.....+++........+.+ .++....+..+ ++...
T Consensus 82 ~~~~~~G~tt~~d~~~~~~~~~~~~~~~~~~~~~~~~Gv~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~g~~~~ 158 (387)
T cd01308 82 SDLTTAGVTTVVGCLGTDGISRSMEDLLAKARALEEEGITCFVYTGSYEVPTRTITGSIRKDLLLIDKVIG---VGEIAI 158 (387)
T ss_pred HHHHhCCceEEecCcCCCCCCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCcCchhhHHHHHHHHHHhcC---cceEEE
Confidence 67899999999998632211 1 122333344444444443332211000011111 11211111112 11111
Q ss_pred ecCCCccCCHHHHHHHHHHHHHcCC------cEEEecC-ChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHH
Q 014320 205 AYKGSFMINDELLIEGFKRCKSLGA------LAMVHAE-NGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIR 277 (427)
Q Consensus 205 ~~~~~~~~~~~~l~~~~~~a~~~g~------~v~~H~e-~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~ 277 (427)
...........++.++.+.++..+. .+++|.. .. .++++.++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vh~~~~~-------------------------------~~~~~i~~ 207 (387)
T cd01308 159 SDHRSSQPTVEELARIAAEARVGGLLGGKAGIVHIHLGDGK-------------------------------RALSPIFE 207 (387)
T ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCch-------------------------------HHHHHHHH
Confidence 2222233456677777777765432 3666653 32 23344445
Q ss_pred HHHhcCCCE-EEEcCCCHHHHH----HHHHHhhcCCCE--EEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHH
Q 014320 278 LAEFVNTPL-YVVHVMSMDAME----EIAKARKAGQRV--IGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNK 350 (427)
Q Consensus 278 ~~~~~g~~~-~i~H~~~~~~~~----~i~~~~~~G~~v--~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~ 350 (427)
+.++.|+++ +++|.......+ .++ ..++|..+ ....+|+++ ..||++ ..+
T Consensus 208 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~~v~i~~~~~~~~~-------------------~~~~~~---~~~ 264 (387)
T cd01308 208 LIEETEIPITQFLPTHINRTAPLFEQGVE-FAKMGGTIDLTSSIDPQFR-------------------KEGEVR---PSE 264 (387)
T ss_pred HHHhcCCCcceeECCcccCCHHHHHHHHH-HHHcCCcEEEECCCCcccc-------------------ccCccC---hHH
Confidence 555556655 666665432223 233 33345433 232333222 124432 357
Q ss_pred HHHHHHhcCCc---eEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 351 ALQAALATGIL---QLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 351 ~l~~~l~~G~~---~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
.+|.+++.|.. ++++|||....+.... .+.+ ...|.++.++.++.+. .+++.++++++++++++|.|||++
T Consensus 265 ~l~~~~~~g~~~d~i~l~TD~~~~~p~~~~--~g~~--~~~g~~~~~~~~~~~~-~~v~~~~i~~~~al~~~T~npA~~ 338 (387)
T cd01308 265 ALKRLLEQGVPLERITFSSDGNGSLPKFDE--NGNL--VGLGVGSVDTLLREVR-EAVKCGDIPLEVALRVITSNVARI 338 (387)
T ss_pred HHHHHHHhCCCCCcEEEEECCCCCcccCcc--CCeE--EecCcCcHHHHHHHHH-HHHHhCCCCHHHHHHHHHHHHHHH
Confidence 78899999863 5999998522111100 0111 2468888888888777 677778899999999999999985
No 62
>PRK08418 chlorohydrolase; Provisional
Probab=99.93 E-value=1.2e-24 Score=213.77 Aligned_cols=311 Identities=13% Similarity=0.043 Sum_probs=187.7
Q ss_pred EEEECcEEEcCCC----ceeeeEEEeCCeEEEeeCCCCC---CCCceEEeCCCCEEeccccccccccccCcC-CCC----
Q 014320 55 ILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNINV---GDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GSE---- 122 (427)
Q Consensus 55 ~~i~~~~i~~~~~----~~~~~i~i~~g~I~~vg~~~~~---~~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g~~---- 122 (427)
.+|+|++|++++. ..+++|+|+ |+|++||+..+. .++.++||++|++|+|||||+|+|+.+... +..
T Consensus 2 ~~i~~~~v~t~~~~~~~~~~~~v~v~-~~I~~ig~~~~~~~~~~~~~vid~~g~~v~PG~Vn~H~H~~~~~~rg~~~~~~ 80 (408)
T PRK08418 2 KIIGASYIFTCDENFEILEDGAVVFD-DKILEIGDYENLKKKYPNAKIQFFKNSVLLPAFINPHTHLEFSANKTTLDYGD 80 (408)
T ss_pred EEEEccEEEecCCCCceeeccEEEEC-CEEEEecCHHHHHhhCCCCcEEecCCcEEccCccccccchhhhhhccccCCCc
Confidence 4789999998762 357899999 999999974321 123468999999999999999999976421 110
Q ss_pred ---------------ChhhHH----HHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccccCCChh
Q 014320 123 ---------------TIDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEV 183 (427)
Q Consensus 123 ---------------~~e~~~----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (427)
+++..+ .+..+++++||||+.|+.... ..+++..+.+.|..+............++
T Consensus 81 ~~~wl~~~~~~~~~l~~~~~~~~~~~~~~E~l~~GtTtv~d~~~~~-----~~~~a~~~~GiR~~~~~~~~~~~~~~~~~ 155 (408)
T PRK08418 81 FIPWLGSVINHREDLLEKCKGALIQQAINEMLKSGVGTIGAISSFG-----IDLEICAKSPLRVVFFNEILGSNASAVDE 155 (408)
T ss_pred hHHHHHHHhhhhhhcCHHHHHHHHHHHHHHHHhcCceEEEEeecch-----hhHHHHHhcCCeEEEEeeeeCCCccchhh
Confidence 111111 233467999999999975321 22455666666654322211111011111
Q ss_pred hHHHHHHHHHH---cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHH-------HHHcC
Q 014320 184 VSDEMEVMVKE---KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKR-------MIELG 252 (427)
Q Consensus 184 ~~~~~~~l~~~---~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~-------l~~~G 252 (427)
..+.+.+.... ...+.++..++++++++++++.++++.+.|+++|+++++|+ |+..+++.+.+. ++..|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~aph~~~t~s~e~l~~~~~~A~~~~~~i~~H~~E~~~E~~~~~~~~G~~~~~~~~~~ 235 (408)
T PRK08418 156 LYQDFLARFEESKKFKSKKFIPAIAIHSPYSVHPILAKKALQLAKKENLLVSTHFLESKAEREWLEESKGWFKKFFEKFL 235 (408)
T ss_pred hHHHHHHHHHhhhcccCCceeEEEeCCCCCCCCHHHHHHHHHHHHHcCCeEEEEecCCHHHHHHHHhccCchhhhhhhhc
Confidence 11111111111 12356888889999999999999999999999999999996 787776555321 22222
Q ss_pred CCCcccccccCCHHHHHHHHHHHHHHHHhc-CCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCc
Q 014320 253 ITGPEGHALSRPPLLEGEATTRAIRLAEFV-NTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDF 331 (427)
Q Consensus 253 ~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~-g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~ 331 (427)
...+ ...+| ++..... +.+..+.|+...+. +.++.+++.|+.|+. ||....
T Consensus 236 ~~~~---~~~~p-----------v~~l~~~g~~~~~~~H~~~~~~-~di~~la~~g~~v~~--cP~sn~----------- 287 (408)
T PRK08418 236 KEPK---PLYTP-----------KEFLELFKGLRTLFTHCVYASE-EELEKIKSKNASITH--CPFSNR----------- 287 (408)
T ss_pred cccc---ccCCH-----------HHHHHHhCCCCeEEEecccCCH-HHHHHHHHcCCcEEE--CHhHHH-----------
Confidence 1000 00011 1111122 35778999987765 678888889987776 775221
Q ss_pred ccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCC
Q 014320 332 VTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQIS 411 (427)
Q Consensus 332 ~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~ 411 (427)
..|.. .+| +.++++.|+.+++|||..+.++..+.+ .+.++..+..+. .....+
T Consensus 288 ~lg~g---~~p---------~~~~~~~Gi~v~lGtD~~~~~~~~~~~--------------~em~~~~~~~~~-~~~~~~ 340 (408)
T PRK08418 288 LLSNK---ALD---------LEKAKKAGINYSIATDGLSSNISLSLL--------------DELRAALLTHAN-MPLLEL 340 (408)
T ss_pred HhcCC---Ccc---------HHHHHhCCCeEEEeCCCCCCCCCcCHH--------------HHHHHHHHHhcc-CCcccc
Confidence 11111 244 456999999999999975443322211 122332221110 011234
Q ss_pred HHHHHHHHchhhhcC
Q 014320 412 VTDYVRLTSTEWGRL 426 (427)
Q Consensus 412 l~~~v~~~t~npA~~ 426 (427)
..++++++|.|+|+.
T Consensus 341 ~~~~l~~aT~~gA~a 355 (408)
T PRK08418 341 AKILLLSATRYGAKA 355 (408)
T ss_pred HHHHHHHHHHHHHHH
Confidence 689999999999974
No 63
>COG0402 SsnA Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only]
Probab=99.93 E-value=5.5e-24 Score=210.59 Aligned_cols=312 Identities=21% Similarity=0.280 Sum_probs=199.7
Q ss_pred cEEEECcEEEcCCC---ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCC----------
Q 014320 54 KILIKGGTVVNAHH---QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG---------- 120 (427)
Q Consensus 54 ~~~i~~~~i~~~~~---~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g---------- 120 (427)
.++|+|..++..+. .+.+++.|+||||+.||+..+.+++.++||++|++|+|||||+|+|+.++...
T Consensus 3 ~~~i~~~~~~~~d~~~~~~~~~~~i~~g~I~~ig~~~~~~~~~~~iD~~~~lv~Pgfvn~H~H~~~t~~~g~~~~~~l~~ 82 (421)
T COG0402 3 MLLIRGDLLLTNDPEGRIEDGDLVIEDGKIVAIGANAEGPPDEEVIDAKGKLVLPGFVNAHTHLDQTLLRGLADDLPLLE 82 (421)
T ss_pred ceeeeCcEEeecCcccceeeeeEEEcCCEEEEeCCcCCCCCCceeecCCCCEeccCccccccchHHHHHhhhhcccchHH
Confidence 36788888887543 25699999999999999876543567899999999999999999998775210
Q ss_pred ------------CCChhhHHH----HHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceec-----cccC
Q 014320 121 ------------SETIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHM-----AITK 179 (427)
Q Consensus 121 ------------~~~~e~~~~----~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 179 (427)
..++++.+. ....++++|||++..+...........++...+.+.+......+.. ....
T Consensus 83 wl~~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~t~~~~~~~~~~~~~~~~~~a~~~~g~r~~~~~~~~~~~~p~~~~~ 162 (421)
T COG0402 83 WLERYVWPREARLLTEEDLYARALLALLEMLRNGTTTARTHVDVVAESADAAFEAALEVGLRAVLGPVLQDVAFPDPGAE 162 (421)
T ss_pred HHHHHHhHHHhhcCCHHHHHHHHHHHHHHHHhcCccccccccchhhhhHHHHHHHHHHhCCeeEeeeccccCCCCccccc
Confidence 113333332 3345799999997665433222345567777777766444333222 1111
Q ss_pred CChhhHHHHHHHHH-HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcCCCCcc
Q 014320 180 WDEVVSDEMEVMVK-EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPE 257 (427)
Q Consensus 180 ~~~~~~~~~~~l~~-~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~ 257 (427)
..+. +++.+++++ +.+...+++...++.+..++++.++.+.+.++++|+++++|+ |+.+++....+ ..|..
T Consensus 163 ~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~v~iH~~E~~~e~~~~~~---~~g~~--- 235 (421)
T COG0402 163 TDEE-LEETEELLREAHGLGRDVVGLAPHFPYTVSPELLESLDELARKYGLPVHIHLAETLDEVERVLE---PYGAR--- 235 (421)
T ss_pred chHH-HHHHHHHHHHHhcCCCeeEEEecCCCCCCCHHHHHHHHHHHhcCCCceEEEecCcHHHHHHHHh---hcCCC---
Confidence 1111 233444443 345557788889999999999999999999999999999996 99888876654 11210
Q ss_pred cccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCcee
Q 014320 258 GHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKY 337 (427)
Q Consensus 258 ~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~ 337 (427)
| .+.+......+.+..+.|+..... +.++.+++.|+.|++ ||.. |...+++
T Consensus 236 ------~--------~~~~~~~g~l~~~~~~~H~~~~~~-~e~~~l~~~g~~v~~--cP~s-----------N~~L~sG- 286 (421)
T COG0402 236 ------P--------VERLDLLGLLGSHTLLAHCVHLSE-EELELLAESGASVVH--CPRS-----------NLKLGSG- 286 (421)
T ss_pred ------H--------HHHHHHcCCCCCCeEEEEeccCCH-HHHHHHhhCCCeEEE--Ccch-----------hccccCC-
Confidence 0 011111222234556777766553 445666688988876 7753 2222233
Q ss_pred EEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHH--HH
Q 014320 338 VMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVT--DY 415 (427)
Q Consensus 338 ~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~--~~ 415 (427)
..| +++++..|+++.+|||...+++..+.+ .+.+...++.+.......+.. ++
T Consensus 287 --~~p---------~~~~~~~gv~v~~gTD~~~~~~~~d~l--------------~~~~~a~~l~~~~~~~~~~~~~~~~ 341 (421)
T COG0402 287 --IAP---------VRRLLERGVNVALGTDGAASNNVLDML--------------REMRTADLLQKLAGGLLAAQLPGEA 341 (421)
T ss_pred --CCC---------HHHHHHcCCCEEEecCCccccChHHHH--------------HHHHHHHHHHHhhcCCCcccchHHH
Confidence 233 456899999999999998877644432 244555555433221111121 38
Q ss_pred HHHHchhhhcC
Q 014320 416 VRLTSTEWGRL 426 (427)
Q Consensus 416 v~~~t~npA~~ 426 (427)
++++|.|+||.
T Consensus 342 l~~aT~~gA~a 352 (421)
T COG0402 342 LDMATLGGAKA 352 (421)
T ss_pred HHHHHhhHHHH
Confidence 99999999984
No 64
>cd01313 Met_dep_hydrolase_E Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.93 E-value=2.9e-24 Score=212.24 Aligned_cols=290 Identities=16% Similarity=0.052 Sum_probs=176.0
Q ss_pred eeeeE-EEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCC-------------------------C
Q 014320 69 QIADV-YVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS-------------------------E 122 (427)
Q Consensus 69 ~~~~i-~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~-------------------------~ 122 (427)
++++| +|+||||++||+... .++||++|++|+|||||+|+|+.+..... .
T Consensus 9 ~~~~i~~v~~g~I~~Vg~~~~----~~~iD~~g~lv~PGfVn~H~Hl~~~~~rg~~~~~~~~~~~l~~w~~~~~~~~~~~ 84 (418)
T cd01313 9 RNVRIEVDADGRIAAVNPDTA----TEAVALLGGALLPGMPNLHSHAFQRAMAGLTEYRGSAADSFWTWRELMYRFAARL 84 (418)
T ss_pred cCeEEEEeCCCeEEEecCCCC----CcccccCCCeeccCccccCccHHHHHhcccccccCCCCCChhhHHHHHHHHHHhC
Confidence 46899 999999999998532 25699999999999999999998752110 1
Q ss_pred ChhhHHH----HHHHHHcCCceEEecCcCCCCC-----------cHHHHHHHHHHHhccccceeceec--c---ccCC--
Q 014320 123 TIDDFFS----GQAAALAGGTTMHIDFVIPING-----------SLTAGFEAYEKKAKNSCMDYGFHM--A---ITKW-- 180 (427)
Q Consensus 123 ~~e~~~~----~~~~~l~~GvTtv~d~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~-- 180 (427)
++++++. +...++++||||+.|+...... .....+++..+.+.|..+...+.. + ....
T Consensus 85 t~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~GiR~~~~~~~~~~~~~~~~~~~~~ 164 (418)
T cd01313 85 TPEQIEAIARQLYIEMLLAGITAVGEFHYVHHDPDGTPYADPAELAQRVIAAASDAGIGITLLPVLYARAGFGGPAPNPG 164 (418)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCEEEEeeeeccCCCCCccCChhhhHHHHHHHHHHhCCeEEeeeeEEeccCCCCCCCchh
Confidence 2223322 2345699999999997521110 123455666666666443322211 0 0000
Q ss_pred -------ChhhHHHHHHHHH-HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHc
Q 014320 181 -------DEVVSDEMEVMVK-EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIEL 251 (427)
Q Consensus 181 -------~~~~~~~~~~l~~-~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~ 251 (427)
.++.++.+.+++. ......+...+.+++...++++.++++++.|++ |+++++|+ |+..++..+.+ ..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~s~e~l~~~~~~a~~-g~~i~~H~~e~~~e~~~~~~---~~ 240 (418)
T cd01313 165 QRRFINGYEDFLGLLEKALRAVKEHAAARIGVAPHSLRAVPAEQLAALAALASE-KAPVHIHLAEQPKEVDDCLA---AH 240 (418)
T ss_pred hhhhcccHHHHHHHHHHHhhhhccCCceEEEEccCCCCCCCHHHHHHHHHHHhc-CCceEEEeCCCHHHHHHHHH---Hc
Confidence 0122223333221 122335677778888888999999999999999 99999997 66544433321 22
Q ss_pred CCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCc
Q 014320 252 GITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDF 331 (427)
Q Consensus 252 G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~ 331 (427)
|.. | ++ .+......+.++.+.|+...+. +.++++++.|+.++. ||...+..
T Consensus 241 g~~---------~-------i~-~l~~~g~l~~~~~~~H~~~l~~-~~~~~la~~g~~v~~--~P~sn~~l--------- 291 (418)
T cd01313 241 GRR---------P-------VE-LLLDHGHLDARWCLVHATHLTD-NETLLLGRSGAVVGL--CPTTEANL--------- 291 (418)
T ss_pred CCC---------H-------HH-HHHHcCCCCCCEEEEeCCCCCH-HHHHHHHHcCCEEEE--CCCchhhc---------
Confidence 221 1 11 1111123456788999987765 668999999987775 77633211
Q ss_pred ccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHh-----
Q 014320 332 VTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVE----- 406 (427)
Q Consensus 332 ~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~----- 406 (427)
+. ..+|+ .++++.|+.+++|||..+..... .+.+......+...
T Consensus 292 --g~---g~~p~---------~~l~~~Gv~v~lGtD~~~~~d~~-----------------~~~~~~~~~~~~~~~~~~~ 340 (418)
T cd01313 292 --GD---GIFPA---------AALLAAGGRIGIGSDSNARIDLL-----------------EELRQLEYSQRLRDRARNV 340 (418)
T ss_pred --cC---CCCCH---------HHHHHCCCcEEEecCCCCCcCHH-----------------HHHHHHHHHHHHHhccccc
Confidence 11 12554 45889999999999953321110 11222222212211
Q ss_pred ---cCCCCHHHHHHHHchhhhcC
Q 014320 407 ---SGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 407 ---~~~l~l~~~v~~~t~npA~~ 426 (427)
...+++.++++++|.|+|+.
T Consensus 341 ~~~~~~~~~~~~l~~~T~~gA~a 363 (418)
T cd01313 341 LATAGGSSARALLDAALAGGAQA 363 (418)
T ss_pred ccccCCCCHHHHHHHHHHHHHHH
Confidence 23799999999999999974
No 65
>COG3964 Predicted amidohydrolase [General function prediction only]
Probab=99.93 E-value=6.7e-24 Score=187.78 Aligned_cols=291 Identities=17% Similarity=0.195 Sum_probs=180.6
Q ss_pred CCccEEEECcEEEcCCC--ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHH
Q 014320 51 SSSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFF 128 (427)
Q Consensus 51 ~~~~~~i~~~~i~~~~~--~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~ 128 (427)
|+.|++++|++++++.. ....+|+|.||||++++ ..+.+.++++||++|++|.||+||.|+|.+.. +.....+-
T Consensus 2 mqfdiLLt~~rlidpa~g~d~~tniai~ngkIaa~~-d~~apa~tq~Ida~Gc~VspG~iDlHvHvy~g--gt~~~v~p- 77 (386)
T COG3964 2 MQFDILLTGGRLIDPARGIDEITNIAIINGKIAAAD-DYPAPAETQIIDADGCIVSPGLIDLHVHVYYG--GTEGGVRP- 77 (386)
T ss_pred CccceeeeCCeecccccccCccceeeeecCeEEecc-CcCCChhheEEccCccEeccCeeeeeeEEecC--CCccCcCH-
Confidence 57899999999998765 34678999999999999 55666778999999999999999999999876 33221111
Q ss_pred HHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHh---ccccceeceeccccC-----CChhhHHHHHHHHHHc--CCC
Q 014320 129 SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKA---KNSCMDYGFHMAITK-----WDEVVSDEMEVMVKEK--GIN 198 (427)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~~--g~~ 198 (427)
...+...||||++|.+..+..+.....+...+.. ...++++++.+-... ...-..+++.+..+++ -+.
T Consensus 78 --d~~ga~~GvTTvVDAGSaGaanf~gF~r~vie~Sr~RI~Aflnvs~~Gl~a~nE~~d~~nid~d~i~aa~reh~d~iv 155 (386)
T COG3964 78 --DMYGAPNGVTTVVDAGSAGAANFDGFYRTVIEASRVRIKAFLNVSPPGLTASNELYDPDNIDEDKIHAAFREHRDVIV 155 (386)
T ss_pred --HHccccCCceEEEecCCcCccchhhHHHHhhcchhheeeeeeeccCcceeeehhhCChhhCCHHHHHHHHHhCcCcEE
Confidence 3457899999999998665443333333333332 124555544322111 0111234555555332 245
Q ss_pred eEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChh-hHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHH
Q 014320 199 SFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGD-AVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIR 277 (427)
Q Consensus 199 ~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~-~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~ 277 (427)
++|+-++.+......-.-+....+.|+..++|+++|..++. ...+..++|.
T Consensus 156 GlKvR~s~~~~g~~GitPl~la~~ia~~~klPlmvHigePp~~~dEvlerL~---------------------------- 207 (386)
T COG3964 156 GLKVRVSTEDIGEYGITPLTLALRIANDLKLPLMVHIGEPPVLMDEVLERLR---------------------------- 207 (386)
T ss_pred EEEEEeeeccccccCCchHHHHHHHHhhcCCceEEecCCCCccHHHHHHhcc----------------------------
Confidence 78887765433333334466777888899999999984443 2233332221
Q ss_pred HHHhcCCCEEEEcCCC----------HHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcc
Q 014320 278 LAEFVNTPLYVVHVMS----------MDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASG 347 (427)
Q Consensus 278 ~~~~~g~~~~i~H~~~----------~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~ 347 (427)
.-+ .+.|+.. ..-...+++++++|+..-....- +. .
T Consensus 208 ---~GD---IitHcfngkpn~~l~~dg~vr~~vrra~erGV~fD~ghG~------------------as----------f 253 (386)
T COG3964 208 ---RGD---IITHCFNGKPNTILTDDGVVRAEVRRARERGVIFDAGHGR------------------AS----------F 253 (386)
T ss_pred ---CCc---eeeeeccCCCCCccccchhHHHHHHHHHhcceEEEccCCc------------------ce----------e
Confidence 111 2555532 22345678888888544321110 11 1
Q ss_pred cHHHHHHHHhcCC-ceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 348 HNKALQAALATGI-LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 348 ~~~~l~~~l~~G~-~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+....+.++..|. +++|+||=..++. +.+-.+.++..++++..- +++++++++.+|.|||..
T Consensus 254 sf~vAr~aia~GllP~~ISSDlh~~~~----------------~n~Pv~dla~~mSKllal-gmpl~~Vi~avT~npA~~ 316 (386)
T COG3964 254 SFNVARRAIANGLLPDIISSDLHTITK----------------LNGPVYDLAWIMSKLLAL-GMPLTDVINAVTHNPAVL 316 (386)
T ss_pred eHHHHHHHHhcCCCcceeeccceeeee----------------cCchHHHHHHHHHHHHHc-CCcHHHHHHHHhcCHHHH
Confidence 2233456777887 5899999433321 122344566666665543 599999999999999974
No 66
>PRK09356 imidazolonepropionase; Validated
Probab=99.92 E-value=1.5e-23 Score=207.18 Aligned_cols=295 Identities=20% Similarity=0.174 Sum_probs=172.9
Q ss_pred CCccEEEECcEEEcCCC--------ceeeeEEEeCCeEEEeeCCCCCC--CCceEEeCCCCEEeccccccccccccCcCC
Q 014320 51 SSSKILIKGGTVVNAHH--------QQIADVYVEDGIVVAVQPNINVG--DDVKVLDATGKFVMPGGIDPHTHLAMEFMG 120 (427)
Q Consensus 51 ~~~~~~i~~~~i~~~~~--------~~~~~i~i~~g~I~~vg~~~~~~--~~~~viD~~g~~v~PG~ID~H~H~~~~~~g 120 (427)
||.+++|+|++|++++. .++++|+|+||||++||+..+.+ .+.++||++|++|||||||+|+|+.++...
T Consensus 1 ~~~~~li~~~~v~~~~~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~~~~~iD~~g~~v~PG~id~H~Hl~~~~~~ 80 (406)
T PRK09356 1 MMADLLWTNAQLATMDGGGMGELGIIEDGAIAIEDGKIVWVGPEADLPAAYAAEVIDAGGKLVTPGLIDCHTHLVFGGNR 80 (406)
T ss_pred CCceEEEECCEEEecCCCCccccccccCcEEEEECCEEEEEeCccccccccCceEEECCCCEEeeceEecCCCcccCCCc
Confidence 46779999999998653 34789999999999999865432 235899999999999999999999764110
Q ss_pred C-------------------------------CChhhHH----HHHHHHHcCCceEEecCcCCCCC--cHHHHHHHHHHH
Q 014320 121 S-------------------------------ETIDDFF----SGQAAALAGGTTMHIDFVIPING--SLTAGFEAYEKK 163 (427)
Q Consensus 121 ~-------------------------------~~~e~~~----~~~~~~l~~GvTtv~d~~~~~~~--~~~~~~~~~~~~ 163 (427)
. .++++++ .....++++||||+.++...... ...+.++..+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~a~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~ 160 (406)
T PRK09356 81 ANEFELRLQGVSYEEIAAQGGGILSTVRATRAASEEELFAQALPRLDALLAEGVTTVEIKSGYGLDLETELKMLRVARRL 160 (406)
T ss_pred HHHHHHHHCCCcHHHHHHhcCChHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCceEEEeeccCCCCHHHHHHHHHHHHHH
Confidence 0 0112221 12345689999999986422211 122334444444
Q ss_pred hccccceec--eec--ccc-C---CChhhHHH----HHHHHHH-cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCc
Q 014320 164 AKNSCMDYG--FHM--AIT-K---WDEVVSDE----MEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGAL 230 (427)
Q Consensus 164 ~~~~~~~~~--~~~--~~~-~---~~~~~~~~----~~~l~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~ 230 (427)
+.+..+.+. +.. ... . ..++.++. +.+.... .++..++.+.. ...++++.++++++.|+++|++
T Consensus 161 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~~~l~~~~~~A~~~g~~ 237 (406)
T PRK09356 161 GEEHPVDVVTTFLGAHAVPPEYKGRPDAYIDLVCEEMLPAVAEEGLADAVDVFCE---TGAFSVEQSERVLEAAKALGLP 237 (406)
T ss_pred hhhCCCceEeeeeecccCCccccCCHHHHHHHHHHHHhHHHHhcCCcceEEEEec---CCCCCHHHHHHHHHHHHHCCCC
Confidence 433211111 100 000 0 01111222 2211112 23556665433 2346899999999999999999
Q ss_pred EEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCE
Q 014320 231 AMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRV 310 (427)
Q Consensus 231 v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v 310 (427)
+++|+........ .+. ....+ ...+.|+...+. +.++++++.|+.+
T Consensus 238 v~~H~~~~~~~~~-~~~-------------------------------~~~~~-~~~~~H~~~~~~-~~~~~la~~g~~~ 283 (406)
T PRK09356 238 VKIHAEQLSNLGG-AEL-------------------------------AAEYG-ALSADHLEYLDE-AGIAAMAEAGTVA 283 (406)
T ss_pred EEEEEecccCCCH-HHH-------------------------------HHHcC-CcEehHhhcCCH-HHHHHHHHhCCEE
Confidence 9999843211100 001 11112 234667766554 5678888888765
Q ss_pred EEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCC-ChhhhhcCCCCCccCCCC
Q 014320 311 IGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF-NSTQKAFGIDDFRKIPNG 389 (427)
Q Consensus 311 ~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~-~~~~~~~~~~~~~~~~~G 389 (427)
+ .||...+... . ...+| +.++++.|+++++|||+.|. ++..
T Consensus 284 ~--~~P~~~~~l~-----------~--~~~~~---------~~~l~~~Gi~v~lgtD~~~~~~~~~-------------- 325 (406)
T PRK09356 284 V--LLPGAFYFLR-----------E--TQYPP---------ARLLRDAGVPVALATDFNPGSSPTE-------------- 325 (406)
T ss_pred E--ECccchhhcC-----------c--ccCch---------HHHHHHCCCeEEEeCCCCCCCChhH--------------
Confidence 5 4775432110 0 01133 45578899999999998552 2110
Q ss_pred CchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 390 VNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 390 ~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
.+...+...+...++++.++++++|.|||+.
T Consensus 326 ------~~~~~~~~~~~~~~l~~~~~l~~~T~~~A~~ 356 (406)
T PRK09356 326 ------SLLLAMNMACTLFRLTPEEALAAVTINAARA 356 (406)
T ss_pred ------HHHHHHHHHhhhcCCCHHHHHHHHHHHHHHH
Confidence 1222221223346799999999999999974
No 67
>cd01312 Met_dep_hydrolase_D Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.92 E-value=5.7e-24 Score=207.05 Aligned_cols=294 Identities=14% Similarity=0.023 Sum_probs=175.6
Q ss_pred CeEEEeeCCCCC---CCCceEEeCCCCEEeccccccccccccCcC-CC-------------------CChhhHH----HH
Q 014320 78 GIVVAVQPNINV---GDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS-------------------ETIDDFF----SG 130 (427)
Q Consensus 78 g~I~~vg~~~~~---~~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g~-------------------~~~e~~~----~~ 130 (427)
|+|++||+..+. .++.+++|+.|++|+|||||+|+|+.+... +. .++++.+ .+
T Consensus 1 ~~I~aVG~~~~~~~~~~~~~v~d~~g~~v~PGlVnaH~H~~~~~~rg~~~~~~~~~wl~~~~~~~~~~~~e~~~~~a~~~ 80 (381)
T cd01312 1 DKILEVGDYEKLEKRYPGAKHEFFPNGVLLPGLINAHTHLEFSANVAQFTYGRFRAWLLSVINSRDELLKQPWEEAIRQG 80 (381)
T ss_pred CeEEEECChHHHHhhcCCCeEEecCCcEEecCccccccccchhccccccCCCchHHHHHHHHHHHHhcChHHHHHHHHHH
Confidence 699999985332 134689999999999999999999976522 11 1122222 23
Q ss_pred HHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccccC-CChhhHHHHHHHHHH--cCCCeEEEEEecC
Q 014320 131 QAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITK-WDEVVSDEMEVMVKE--KGINSFKFFMAYK 207 (427)
Q Consensus 131 ~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~--~g~~~ik~~~~~~ 207 (427)
..+++++||||+.|+... .+.+++..+.+.|..+.+.+...... ..+...+.++...++ ...+.++..++++
T Consensus 81 ~~E~l~~G~Tt~~d~~~~-----~~~~~a~~~~GiR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 155 (381)
T cd01312 81 IRQMLESGTTSIGAISSD-----GSLLPALASSGLRGVFFNEVIGSNPSAIDFKGETFLERFKRSKSFESQLFIPAISPH 155 (381)
T ss_pred HHHHHHhCCeEEEEecCC-----HHHHHHHHHcCCcEEEEEeeECCCCchhhhhHHHHHHHHHHhhccCccceEEEECCC
Confidence 345689999999998632 22566677777776555443321111 111111111222111 1234578888999
Q ss_pred CCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHH-------HHHcCCCCcccccccCCHHHHHHHHHHHHHHH
Q 014320 208 GSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKR-------MIELGITGPEGHALSRPPLLEGEATTRAIRLA 279 (427)
Q Consensus 208 ~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~-------l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~ 279 (427)
.+..++++.++++.+.|+++|+++++|+ |+..+...+.+. ++..+... .......+ + +.++..
T Consensus 156 a~~~~s~e~l~~~~~lA~~~g~~i~~Hl~E~~~e~~~~~~~~g~~~~~~~~~~~~~--~~~~g~~p------v-~~l~~~ 226 (381)
T cd01312 156 APYSVHPELAQDLIDLAKKLNLPLSTHFLESKEEREWLEESKGWFKHFWESFLKLP--KPKKLATA------I-DFLDML 226 (381)
T ss_pred CCcccCHHHHHHHHHHHHHcCCeEEEEecCcHHHHHHHHHhccchhhHhhhhcccc--cccCCCCH------H-HHHHHc
Confidence 9999999999999999999999999996 887776554321 11111000 00000001 1 112222
Q ss_pred HhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcC
Q 014320 280 EFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATG 359 (427)
Q Consensus 280 ~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G 359 (427)
...+.++.+.|+...+. +.++.+++.|+.|+. ||.... ..+.. .+| +.++++.|
T Consensus 227 g~L~~~~~~~H~~~l~~-~~~~~l~~~g~~v~~--~P~sn~-----------~lg~g---~~p---------~~~~~~~G 280 (381)
T cd01312 227 GGLGTRVSFVHCVYANL-EEAEILASRGASIAL--CPRSNR-----------LLNGG---KLD---------VSELKKAG 280 (381)
T ss_pred CCCCCCcEEEECCcCCH-HHHHHHHHcCCeEEE--Ccchhh-----------hhcCC---CcC---------HHHHHHCC
Confidence 33456788999988764 678889999987775 774211 11111 144 45699999
Q ss_pred CceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 360 ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 360 ~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+.+++|||+.+.+...+.+ .+.++...+... ....+++.++++++|.|+|+.
T Consensus 281 v~v~lGtD~~~~~~~~d~~--------------~~~~~~~~~~~~-~~~~~~~~~~l~~aT~~gA~a 332 (381)
T cd01312 281 IPVSLGTDGLSSNISLSLL--------------DELRALLDLHPE-EDLLELASELLLMATLGGARA 332 (381)
T ss_pred CcEEEeCCCCccCCCCCHH--------------HHHHHHHHhccc-ccccCCHHHHHHHHHHHHHHH
Confidence 9999999974432221111 122222211100 111368899999999999974
No 68
>PRK07213 chlorohydrolase; Provisional
Probab=99.92 E-value=3e-23 Score=202.26 Aligned_cols=288 Identities=19% Similarity=0.244 Sum_probs=174.2
Q ss_pred EEEECcEEEcCCC--ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCC------------
Q 014320 55 ILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG------------ 120 (427)
Q Consensus 55 ~~i~~~~i~~~~~--~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g------------ 120 (427)
++|+|++|+++.. ..+++|+|+||+|++|++.. ++.++||++|++| |||||+|+|+.+....
T Consensus 2 ~li~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~---~~~~~id~~g~~v-PGlvd~H~H~~~~~~rg~~~~~~l~~~~ 77 (375)
T PRK07213 2 LVYLNGNFLYGEDFEPKKGNLVIEDGIIKGFTNEV---HEGNVIDAKGLVI-PPLINAHTHIGDSSIKDIGIGKSLDELV 77 (375)
T ss_pred EEEEeeEEEeCCCCceeeeEEEEECCEEEEeccCC---CCCeEEeCCCCEe-cceeeeccccCchhhhcCCCCCCHHHHc
Confidence 5899999999765 46788999999999998752 3458999999999 9999999999874210
Q ss_pred ------------CCChhhHHH----HHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccc-cCCChh
Q 014320 121 ------------SETIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI-TKWDEV 183 (427)
Q Consensus 121 ------------~~~~e~~~~----~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 183 (427)
..++++.+. .+..++++||||+.|+.... ...++...+......+...+.... ....++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~~~~----~~~~~~~~~a~~~~~~r~~~~~~~~~~~~~~ 153 (375)
T PRK07213 78 KPPNGLKHKFLNSCSDKELVEGMKEGLYDMYNNGIKAFCDFREGG----IKGINLLKKASSDLPIKPIILGRPTEADENE 153 (375)
T ss_pred cCCCcchHHHHhcCCHHHHHHHHHHHHHHHHHcCCeEEEEhhhcC----hhHHHHHHHHHHcCCCceEEecCCCcccchh
Confidence 012233322 34556899999999974221 111222222211111111111111 011222
Q ss_pred hHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcCCCCccccccc
Q 014320 184 VSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALS 262 (427)
Q Consensus 184 ~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~~~~~~ 262 (427)
..+.+++..+. ..+ ++.++...+++++++++++.|+++|+++++|+ |...+.....+ ..|..
T Consensus 154 ~~~~~~~~~~~--~~g----~~~~~~~~~s~~~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~~---~~G~~-------- 216 (375)
T PRK07213 154 LKKEIREILKN--SDG----IGLSGANEYSDEELKFICKECKREKKIFSIHAAEHKGSVEYSLE---KYGMT-------- 216 (375)
T ss_pred hHHHHHHHHHh--ccc----ccccccccCCHHHHHHHHHHHHHcCCEEEEeeCCchhHHHHHHH---HcCCC--------
Confidence 33334443321 222 23455567889999999999999999999997 66655433321 22221
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCC-EEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcC
Q 014320 263 RPPLLEGEATTRAIRLAEFVNTP-LYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSP 341 (427)
Q Consensus 263 ~p~~~e~~a~~~~~~~~~~~g~~-~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~p 341 (427)
.+ +.+.+.|+. ..+.|+...+. +.++.++++|+.++. ||...+.. +.. .+
T Consensus 217 --------~v----~~~~~~G~~~~~i~H~~~~~~-~~i~~la~~g~~v~~--~P~sn~~l-----------~~g---~~ 267 (375)
T PRK07213 217 --------EI----ERLINLGFKPDFIVHATHPSN-DDLELLKENNIPVVV--CPRANASF-----------NVG---LP 267 (375)
T ss_pred --------hH----HHHHhcCCCCCEEEECCCCCH-HHHHHHHHcCCcEEE--CCcchhhh-----------ccC---Cc
Confidence 11 222223332 13789887664 668899999988776 76522111 011 24
Q ss_pred CCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHch
Q 014320 342 PIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTST 421 (427)
Q Consensus 342 plr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~ 421 (427)
| +.++++.|+.+++|||+.+++. .+.. .+.++. ....++++.++++++|.
T Consensus 268 ~---------v~~l~~~Gv~v~lGTD~~~~~~-~~~~--------------~e~~~~------~~~~~~~~~~~l~~aT~ 317 (375)
T PRK07213 268 P---------LNEMLEKGILLGIGTDNFMANS-PSIF--------------REMEFI------YKLYHIEPKEILKMATI 317 (375)
T ss_pred c---------HHHHHHCCCEEEEeeCCCCCch-HhHH--------------HHHHHH------HHHhCcCHHHHHHHHHH
Confidence 4 5669999999999999855421 1110 122221 12236999999999999
Q ss_pred hhhcC
Q 014320 422 EWGRL 426 (427)
Q Consensus 422 npA~~ 426 (427)
|+|+.
T Consensus 318 ~gA~~ 322 (375)
T PRK07213 318 NGAKI 322 (375)
T ss_pred HHHHH
Confidence 99984
No 69
>PRK05985 cytosine deaminase; Provisional
Probab=99.92 E-value=4.2e-23 Score=202.79 Aligned_cols=298 Identities=17% Similarity=0.144 Sum_probs=172.8
Q ss_pred ccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCC----------
Q 014320 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSE---------- 122 (427)
Q Consensus 53 ~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~---------- 122 (427)
.+++|+|++|+++. ..+|+|+||+|++|++....+++.++||++|++|+|||||+|+|+.....+..
T Consensus 2 ~~~~i~~~~i~~~~---~~~v~i~~g~i~~i~~~~~~~~~~~~id~~g~~v~Pg~iD~h~h~~~~~~~~~~~~~~~~~~~ 78 (391)
T PRK05985 2 TDLLFRNVRPAGGA---AVDILIRDGRIAAIGPALAAPPGAEVEDGGGALALPGLVDGHIHLDKTFWGDPWYPNEPGPSL 78 (391)
T ss_pred CCEEEECcEECCCC---eeEEEEECCEEEEecCCCCCCCCCcEEECCCCEEecceEeeEEccCccccCCccccCCCCCCH
Confidence 46799999999975 56999999999999986543345679999999999999999999965321110
Q ss_pred -------------ChhhH----HHHHHHHHcCCceEEecCcCCCCC----cHHHHHHHHHHHhccccceeceeccccC-C
Q 014320 123 -------------TIDDF----FSGQAAALAGGTTMHIDFVIPING----SLTAGFEAYEKKAKNSCMDYGFHMAITK-W 180 (427)
Q Consensus 123 -------------~~e~~----~~~~~~~l~~GvTtv~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 180 (427)
+.+++ ....+.++++|+|+++|+....+. .....++..+....+..+.+........ .
T Consensus 79 ~~~i~~~~~~~~~~~~~~~~~a~~~~~~~l~~G~t~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~~~ 158 (391)
T PRK05985 79 RERIANERRRRAASGHPAAERALALARAAAAAGTTAMRSHVDVDPDAGLRHLEAVLAARETLRGLIDIQIVAFPQSGVLS 158 (391)
T ss_pred HHHHHHHHHhhccchhHHHHHHHHHHHHHHhcCcceEEeeEccCCCcccchHHHHHHHHHHhhCcccEEEEeccCccccC
Confidence 00011 123456799999999987643221 2222223222211122222211111001 1
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcCCCCcccc
Q 014320 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPEGH 259 (427)
Q Consensus 181 ~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~~~ 259 (427)
.....+.+++.. +.|++.+ ..+.++....++++.+.++++.|+++|+++++|+ +..+...
T Consensus 159 ~~~~~~ll~~~l-~~g~~~~-gg~~p~~~~~~~~~~l~~~~~~A~~~g~~i~~Hv~e~~d~~~----------------- 219 (391)
T PRK05985 159 RPGTAELLDAAL-RAGADVV-GGLDPAGIDGDPEGQLDIVFGLAERHGVGIDIHLHEPGELGA----------------- 219 (391)
T ss_pred CcCHHHHHHHHH-HcCCCEE-eCCCCCCcCCCHHHHHHHHHHHHHHhCCCcEEeeCCCCCccH-----------------
Confidence 111234455555 5565433 2234455566788999999999999999999996 4332111
Q ss_pred cccCCHHHHHHHHHHHHHHHHhcCC--CEEEEcCCCHH------HHHHHHHHhhcCCCEEEecCccceeeCcccccCCCc
Q 014320 260 ALSRPPLLEGEATTRAIRLAEFVNT--PLYVVHVMSMD------AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDF 331 (427)
Q Consensus 260 ~~~~p~~~e~~a~~~~~~~~~~~g~--~~~i~H~~~~~------~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~ 331 (427)
..+.+.++...+.|. ++.+.|+.... ..+.++++++.|+.|+.+ +.. .
T Consensus 220 ----------~~~~~~~e~~~~~g~~~~~~i~H~~~l~~~~~~~~~~~i~~lae~g~~v~~~--~~~----~-------- 275 (391)
T PRK05985 220 ----------FQLERIAARTRALGMQGRVAVSHAFCLGDLPEREVDRLAERLAEAGVAIMTN--APG----S-------- 275 (391)
T ss_pred ----------HHHHHHHHHHHHhCCCCCEehhhhhhhhcCCHHHHHHHHHHHHHcCCeEEEe--CCC----C--------
Confidence 111222333333343 47888886431 125688889999887653 210 0
Q ss_pred ccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCC--CChhhhhcCCCCCccCCCCCchhh-HhHHHHHHHHHhcC
Q 014320 332 VTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCA--FNSTQKAFGIDDFRKIPNGVNGIE-ERMHLVWDTMVESG 408 (427)
Q Consensus 332 ~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p--~~~~~~~~~~~~~~~~~~G~~~~e-~~l~~~~~~~~~~~ 408 (427)
.. .+| +.++++.|+.+++|||+.. +++.. ....++ .++.... ... ..
T Consensus 276 ---~~---~~~---------~~~l~~~Gv~v~lGtD~~~~~~~p~~-------------~~~~~~~~~~~~~~-~~~-~~ 325 (391)
T PRK05985 276 ---VP---VPP---------VAALRAAGVTVFGGNDGIRDTWWPYG-------------NGDMLERAMLIGYR-SGF-RT 325 (391)
T ss_pred ---CC---CCC---------HHHHHHCCCeEEEecCCCCCCCcCCC-------------CCcHHHHHHHHHHH-Hcc-CC
Confidence 01 133 4569999999999999742 11110 001111 1111111 111 11
Q ss_pred CCCHHHHHHHHchhhhcC
Q 014320 409 QISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 409 ~l~l~~~v~~~t~npA~~ 426 (427)
.-++.++++++|.|||+.
T Consensus 326 ~~~~~~al~~~T~~~A~~ 343 (391)
T PRK05985 326 DDELAAALDCVTHGGARA 343 (391)
T ss_pred hHHHHHHHHHHcchhHHH
Confidence 234679999999999984
No 70
>TIGR01178 ade adenine deaminase. The family described by this model includes an experimentally characterized adenine deaminase of Bacillus subtilis. It also include a member from Methanobacterium thermoautotrophicum, in which adenine deaminase activity has been detected.
Probab=99.92 E-value=5.5e-23 Score=207.18 Aligned_cols=174 Identities=20% Similarity=0.290 Sum_probs=127.7
Q ss_pred cEEEECcEEEcCCC--ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHH
Q 014320 54 KILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQ 131 (427)
Q Consensus 54 ~~~i~~~~i~~~~~--~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~ 131 (427)
|++|+|++|+++.. ...++|+|+||||++|++.. +.++||++|++|+|||||+|+|+..+ +. +++.+ .
T Consensus 1 dlli~n~~ivd~~~~~~~~~dI~I~~g~I~~ig~~~----~~~viDa~G~~v~PG~ID~H~Hi~~~--~~-~~~~~---~ 70 (552)
T TIGR01178 1 DIVIKNAKIIDVYNGEIIPGDIAIANGHIAGVGKYN----GVKVIDALGEYAVPGFIDAHIHIESS--ML-TPSEF---A 70 (552)
T ss_pred CEEEEeeEEEeCCCCcEEeeeEEEECCEEEEecCCC----CCeEEECCCCEEEeCeEecccccCCC--CC-ChhHH---H
Confidence 47899999998554 45679999999999998642 35899999999999999999999876 32 44555 4
Q ss_pred HHHHcCCceEEecCcCCC-CCcHHHHHHHHHHHhccccceeceecccc------CCChh--hHHHHHHHHHHcCCCeEEE
Q 014320 132 AAALAGGTTMHIDFVIPI-NGSLTAGFEAYEKKAKNSCMDYGFHMAIT------KWDEV--VSDEMEVMVKEKGINSFKF 202 (427)
Q Consensus 132 ~~~l~~GvTtv~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~--~~~~~~~l~~~~g~~~ik~ 202 (427)
+.++.+||||++++.... +....+.++.+.+...+.++++.+..+.. ..+.. ..++++++.++.|+.++|.
T Consensus 71 ~~al~~GvTtvv~~P~~~~~v~g~~~~~~~~~~a~~~~~d~~~~~~s~vp~~~~e~~g~~~~~~~i~~~~~~~~V~glke 150 (552)
T TIGR01178 71 KLVLPHGVTTVVSDPHEIANVNGEDGINFMLNNAKKTPLNFYFMLPSCVPALQFETSGAVLTAEDIDELMELDEVLGLAE 150 (552)
T ss_pred HHHHCCCEEEEEcCCCCCCCCCCHHHHHHHHHHhhcCCcEEEEECCCCCCCCcccCCCCccCHHHHHHHHcCCCccEEEE
Confidence 678999999999875432 22456777777776666777764433211 11111 3567888885679999999
Q ss_pred EEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCCh
Q 014320 203 FMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (427)
Q Consensus 203 ~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~ 238 (427)
+|++.+....+++.++.+ +.+++.|+.+.+|++..
T Consensus 151 ~m~~~~v~~~d~~~l~~i-~~a~~~g~~I~gHap~l 185 (552)
T TIGR01178 151 VMDYPGVINADIEMLNKI-NSARKRNKVIDGHCPGL 185 (552)
T ss_pred EecchhhcCCCHHHHHHH-HHHHhCCCEEEecCCCC
Confidence 998865444445555544 78999999999999754
No 71
>PRK13206 ureC urease subunit alpha; Reviewed
Probab=99.92 E-value=3.4e-23 Score=204.38 Aligned_cols=205 Identities=18% Similarity=0.207 Sum_probs=146.4
Q ss_pred CccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCC------------CCCceEEeCCCCEEeccccccccccccCcC
Q 014320 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV------------GDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~------------~~~~~viD~~g~~v~PG~ID~H~H~~~~~~ 119 (427)
..|++|+|++|++..+...++|.|+||||++|++.... ..++++||++|++|+|||||+|+|+..+
T Consensus 70 ~~DlVI~Na~IiD~~gi~~adI~IkDGrIvaIG~~~~p~~~~gv~~~~~ig~~tevIDaeG~iV~PG~ID~HVH~~~P-- 147 (573)
T PRK13206 70 APDTVITGAVILDHWGIVKADVGIRDGRIVAIGKAGNPDIMDGVHPDLVIGPSTEIIAGNGRILTAGAIDCHVHFICP-- 147 (573)
T ss_pred CCCEEEECeEEECCCCeEEEEEEEECCEEEEEeCCCCccccccccccccCCCCCEEEECCCCEEEeCEEeeeeccCCc--
Confidence 46899999999997777778999999999999974211 1346899999999999999999998765
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCC-----CC---cHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPI-----NG---SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM 191 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 191 (427)
+. .++++++||||+++++..+ .. ...-.++.+.+......+++++++... ....+++.++
T Consensus 148 g~---------~~aALagGVTTvi~~G~gP~~~t~~~t~t~g~~~l~~~~~aa~~~pvn~g~~g~g~---~~~~~~L~el 215 (573)
T PRK13206 148 QI---------VDEALAAGITTLIGGGTGPAEGSKATTVTPGAWHLARMLEALDGWPVNVALLGKGN---TVSAEALWEQ 215 (573)
T ss_pred hH---------HHHHHcCCeEEEEcCCCCccccCcccccccchhHHHHHHHHhhcCceeEEEecCcC---cCCHHHHHHH
Confidence 21 3789999999999974221 11 111123344444445778888876432 2224567777
Q ss_pred HHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHH
Q 014320 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (427)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a 271 (427)
. +.|+.+||++.++ ..+++.+.++++.|+++|+++.+|+++..+. |+
T Consensus 216 ~-~aGA~GfKi~~d~----g~t~~~i~~aL~~A~~~gv~V~iHadtlne~----------g~------------------ 262 (573)
T PRK13206 216 L-RGGAGGFKLHEDW----GSTPAAIDACLRVADAAGVQVALHSDTLNEA----------GF------------------ 262 (573)
T ss_pred H-HCCCcEEeecCcc----CCCHHHHHHHHHHHHHhCCEEEEECCCcccc----------ch------------------
Confidence 7 7899999998654 3789999999999999999999999875433 11
Q ss_pred HHHHHHHHHhcCCCEEEEcCCCH---HHHHHHHHHhh
Q 014320 272 TTRAIRLAEFVNTPLYVVHVMSM---DAMEEIAKARK 305 (427)
Q Consensus 272 ~~~~~~~~~~~g~~~~i~H~~~~---~~~~~i~~~~~ 305 (427)
.+. .++...|..+|++|.... ..-++|+.+..
T Consensus 263 -~E~-t~aa~~gr~iH~~H~egaggghapd~~~~~~~ 297 (573)
T PRK13206 263 -VED-TLAAIAGRSIHAYHTEGAGGGHAPDIITVASH 297 (573)
T ss_pred -hhH-HHHHhcCCeEEEEeccCCCcCcccHHHHhcCC
Confidence 111 334457888999999753 22345555443
No 72
>TIGR02022 hutF formiminoglutamate deiminase. In some species, histidine utilization goes via urocanate to glutamate in four step, the last being removal of formamide. This model describes an alternate fourth step, formiminoglutamate hydrolase, which leads to N-formyl-L-glutamate. This product may be acted on by formylglutamate amidohydrolase (TIGR02017) and bypass glutamate as a product during its degradation. Alternatively, removal of formate (by EC 3.5.1.68) would yield glutamate.
Probab=99.91 E-value=4.5e-23 Score=205.73 Aligned_cols=304 Identities=15% Similarity=0.052 Sum_probs=178.2
Q ss_pred EEEECcEEEcCCCceeeeEEEe-CCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcC-C------------
Q 014320 55 ILIKGGTVVNAHHQQIADVYVE-DGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G------------ 120 (427)
Q Consensus 55 ~~i~~~~i~~~~~~~~~~i~i~-~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g------------ 120 (427)
..++|+.+-++ -.++.+|+|+ ||||++||+....++. .+..|++|||||||+|+|+.+.+. |
T Consensus 4 ~~~~~~~~~~~-~~~~~~i~I~~~g~I~~vg~~~~~~~~---~~~~g~lvlPGfVn~H~H~~~~~~rg~~~~~~~~~~~l 79 (455)
T TIGR02022 4 YWAERALLPDG-WAEGVRIAVAADGRILAIETGVPAAPG---AERLSGPLLPGLANLHSHAFQRAMAGLAEVAGSGGDSF 79 (455)
T ss_pred hhHHhccCCCc-cccCceEEEecCCEEEEecCCCCcccc---cccCCCEEccCCcccCcchhhHhhcCCcccccCCCCCH
Confidence 34566666322 2357899999 9999999986432222 234689999999999999976421 1
Q ss_pred ------------CCChhhHHH----HHHHHHcCCceEEecCcCCCC-------C----cHHHHHHHHHHHhccccceece
Q 014320 121 ------------SETIDDFFS----GQAAALAGGTTMHIDFVIPIN-------G----SLTAGFEAYEKKAKNSCMDYGF 173 (427)
Q Consensus 121 ------------~~~~e~~~~----~~~~~l~~GvTtv~d~~~~~~-------~----~~~~~~~~~~~~~~~~~~~~~~ 173 (427)
..++++++. +...++++||||+.|+..... . .....++...+.+.|..+...+
T Consensus 80 ~~w~~~~~~~~~~~t~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~e~G~R~~~~~~~ 159 (455)
T TIGR02022 80 WTWRELMYRFVDRLTPEQLQAIARQLYVEMLEAGFTRVGEFHYLHHAPDGTPYADPAEMAERIAAAAADAGIGLTLLPVF 159 (455)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhCCCEEEeeeeecccCCCccccchhhhHHHHHHHHHHhCCeEEeeeee
Confidence 012233332 334569999999999742111 0 1245566677776664333221
Q ss_pred ec-----cccC---------CChhhHHHHHHHHHH-cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CC
Q 014320 174 HM-----AITK---------WDEVVSDEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-EN 237 (427)
Q Consensus 174 ~~-----~~~~---------~~~~~~~~~~~l~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~ 237 (427)
.. +... ..++..+..+.+.+. .+...+.+.+.+++++.++++.++++.+ ++++|+++++|+ |+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~s~e~l~~~~~-a~~~g~~v~~H~~e~ 238 (455)
T TIGR02022 160 YAHSGFGGAAPNPGQRRFIHDVERFARLVEVLRRELAAQPAAVLGLAPHSLRAVTPEQLAAVLQ-ASDRQAPVHIHVAEQ 238 (455)
T ss_pred eecCCCCCCCCcccchhhccCHHHHHHHHHHHHHHhccCCceEEEEecCCCCcCCHHHHHHHHH-HHhCCCceEEEECCC
Confidence 10 0100 001122222333211 1223466677888888899999999999 889999999997 66
Q ss_pred hhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCcc
Q 014320 238 GDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVS 317 (427)
Q Consensus 238 ~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~ 317 (427)
..++..+.+ ..|.. | + +.+......+.++.+.|+...+. +.++.+++.|+.|+. ||.
T Consensus 239 ~~e~~~~~~---~~G~~---------~-------v-~~l~~~g~l~~~~~~~H~~~l~~-~d~~~la~~g~~v~~--~P~ 295 (455)
T TIGR02022 239 QKEVDDCLA---WSGRR---------P-------V-EWLLDHGPVDARWCLVHATHLTD-EETALLARSGAVAGL--CPT 295 (455)
T ss_pred hHHHHHHHH---HhCCC---------H-------H-HHHHHcCCCCCCEEEEEeecCCH-HHHHHHHHcCCeEEE--Chh
Confidence 655544332 22321 0 0 01111112345677888877654 668888999987776 776
Q ss_pred ceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhH
Q 014320 318 GLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERM 397 (427)
Q Consensus 318 ~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l 397 (427)
.... .|.. .+| ++++++.|+.+++|||..+..... .+.++
T Consensus 296 sn~~-----------lg~g---~~p---------i~~l~~~Gv~v~lGTD~~~~~d~~-----------------~~m~~ 335 (455)
T TIGR02022 296 TEAN-----------LGDG---IFP---------AVDFVAAGGRFGIGSDSHVVIDVA-----------------EELRQ 335 (455)
T ss_pred hhcc-----------ccCC---CCC---------HHHHHHCCCeEEEECCCCCCCCHH-----------------HHHHH
Confidence 3211 1111 245 456999999999999964321111 12233
Q ss_pred HHHHHHHHh---------cCCCCHHHHHHHHchhhhcC
Q 014320 398 HLVWDTMVE---------SGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 398 ~~~~~~~~~---------~~~l~l~~~v~~~t~npA~~ 426 (427)
..++.+... ...++.+++++++|.|+||.
T Consensus 336 a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gAra 373 (455)
T TIGR02022 336 LEYGQRLRDRARNVLAAGPGPSVGRALYDAALLGGAQA 373 (455)
T ss_pred HHHHHHHHhcccccccCCcccchHHHHHHHHHHHHHHH
Confidence 322222111 12567889999999999974
No 73
>PRK07572 cytosine deaminase; Validated
Probab=99.91 E-value=2.3e-22 Score=199.31 Aligned_cols=264 Identities=18% Similarity=0.178 Sum_probs=158.2
Q ss_pred cEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcC-CC-----------
Q 014320 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS----------- 121 (427)
Q Consensus 54 ~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g~----------- 121 (427)
+++|+|++|+++. ...+|+|+||+|++|++..+. ...++||++|++|+|||||+|+|+...+. +.
T Consensus 3 ~~~i~~~~i~~~~--~~~~i~i~~g~I~~v~~~~~~-~~~~~id~~g~~~~PG~id~h~h~~~~~~~~~~~~~~~g~l~e 79 (426)
T PRK07572 3 DLIVRNANLPDGR--TGIDIGIAGGRIAAVEPGLQA-EAAEEIDAAGRLVSPPFVDPHFHMDATLSYGLPRVNASGTLLE 79 (426)
T ss_pred cEEEECeEECCCC--eeEEEEEECCEEEEecCCCCC-CcCceEeCCCCEEcccceehhhCcchhhccCCCCCCCCCCHHH
Confidence 5789999999865 356899999999999975432 34579999999999999999999976421 11
Q ss_pred -----------CChhhHHH----HHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhc--cccceeceec-cc--cCCC
Q 014320 122 -----------ETIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK--NSCMDYGFHM-AI--TKWD 181 (427)
Q Consensus 122 -----------~~~e~~~~----~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~--~~~~ 181 (427)
.++++++. ..+.++++|||+++|+....... ...++...+... ...++..... .. ....
T Consensus 80 ~l~~~~~~~~~~t~edl~~~a~~~~~e~l~~G~Ttvrd~~d~~~~~-~~~~~a~~~~~~~~~~~~~~~~~a~~~~g~~~~ 158 (426)
T PRK07572 80 GIALWGELKPLLTQEALVERALRYCDWAVARGLLAIRSHVDVCDPR-LLAVEALLEVRERVAPYLDLQLVAFPQDGVLRS 158 (426)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCcccEeeccccCCCc-ccHHHHHHHHHHHhhccceEEEEeccChhhccC
Confidence 23344332 34567999999999974321111 122222222211 1222211110 00 0011
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCCCccCC--HHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHH----HHHHcCCC
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMIN--DELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQK----RMIELGIT 254 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~--~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~----~l~~~G~~ 254 (427)
++..+.+++.+ +.|++.+.. .++....++ .+.++.++++|+++|+++++|+ ++...+....+ ++.+.|+
T Consensus 159 ~~~~~~~~~~l-~~g~d~iGg--~p~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~~~~~~~~G~- 234 (426)
T PRK07572 159 PGAVDNLERAL-DMGVDVVGG--IPHFERTMADGAESVRLLCEIAAERGLRVDMHCDESDDPLSRHIETLAAETQRLGL- 234 (426)
T ss_pred ccHHHHHHHHH-HcCCCEEeC--CCCCccccchHHHHHHHHHHHHHHcCCCeEEEECCCCChhHHHHHHHHHHHHHhCC-
Confidence 23445667776 577776632 122222333 4899999999999999999998 66655433221 1222222
Q ss_pred CcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHH------HHHHHHHHhhcCCCEEEecCccceeeCcccccC
Q 014320 255 GPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD------AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWH 328 (427)
Q Consensus 255 ~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~------~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~ 328 (427)
.+ ++.+.|+.... ..+.++.++++|+.|++ ||...+.....
T Consensus 235 ---------------------------~~-~v~~~H~~~l~~~~~~~~~~~~~~la~~g~~vv~--~P~~n~~l~~~--- 281 (426)
T PRK07572 235 ---------------------------QG-RVAGSHLTSMHSMDNYYVSKLIPLMAEAGVNAIA--NPLINITLQGR--- 281 (426)
T ss_pred ---------------------------CC-CEEEEccchhhcCCHHHHHHHHHHHHHcCCeEEE--CchhhhhhcCC---
Confidence 12 57788886432 24678889999988876 66432211000
Q ss_pred CCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCC
Q 014320 329 SDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHC 369 (427)
Q Consensus 329 ~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~ 369 (427)
....|.-+ ....+.++++.|+.+++|||+.
T Consensus 282 --------~~~~~~~~---g~~~v~~l~~~GV~v~lGtD~~ 311 (426)
T PRK07572 282 --------HDTYPKRR---GMTRVPELMAAGINVAFGHDCV 311 (426)
T ss_pred --------CCCCCCCC---CCcCHHHHHHCCCcEEEecCCC
Confidence 00001101 1233678999999999999974
No 74
>PRK13207 ureC urease subunit alpha; Reviewed
Probab=99.91 E-value=3.3e-22 Score=197.95 Aligned_cols=208 Identities=19% Similarity=0.198 Sum_probs=147.4
Q ss_pred CccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCC----------CCCceEEeCCCCEEeccccccccccccCcCCC
Q 014320 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV----------GDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS 121 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~----------~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~ 121 (427)
..|++|+|++|+++.+...++|.|+||||++|++.... ..+.++||++|++|+|||||+|+|+..+ +.
T Consensus 66 ~mDlVI~Na~Vvd~~gi~~adI~I~dGrI~~IG~~~~p~~~~~v~~~~~~~~eVIDa~G~iV~PG~ID~HvH~~~P--~~ 143 (568)
T PRK13207 66 AVDTVITNALILDHWGIVKADIGIKDGRIVAIGKAGNPDIQDGVDIIIGPGTEVIAGEGLIVTAGGIDTHIHFICP--QQ 143 (568)
T ss_pred cCCEEEECeEEECCCCeEEEEEEEECCEEEEEeCCCCccccccccccCCCCCeEEECCCCEEEeCeEECccCCccc--cH
Confidence 46899999999998666789999999999999974211 1356899999999999999999998765 21
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcCCCC----C----cHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHH
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVIPIN----G----SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVK 193 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 193 (427)
.++++++||||+++++..+. . .....++.+.+......++++++... ..+..+++++++
T Consensus 144 ---------~~aALagGVTTVi~mg~gP~~gt~~~t~tpG~~~l~~~l~~a~~~pin~g~~g~g---~~~~~~~L~e~i- 210 (568)
T PRK13207 144 ---------IEEALASGVTTMIGGGTGPATGTNATTCTPGPWHIHRMLQAADAFPMNIGFLGKG---NASLPEALEEQI- 210 (568)
T ss_pred ---------HHHHHcCCCCEEEcCCcCCccCCcccccccchHHHHHHHHHhhcCCceEEEEcCC---CcccHHHHHHHH-
Confidence 47789999999999843221 1 11223444444434456677766422 223466777777
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATT 273 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~ 273 (427)
+.|+.+||++.++. .+++.+.++++.|+++|+++.+|+++..+.... +
T Consensus 211 ~aGA~gfKi~~d~g----~t~~~l~~aL~~A~~~gv~V~iHa~tlne~G~~----------------------------e 258 (568)
T PRK13207 211 EAGAIGLKLHEDWG----ATPAAIDNCLSVADEYDVQVAIHTDTLNESGFV----------------------------E 258 (568)
T ss_pred HcCCCEEeecCCCC----CCHHHHHHHHHHHHHhCCEEEEeCCCcccchHH----------------------------H
Confidence 78999999987653 588999999999999999999999764322111 1
Q ss_pred HHHHHHHhcCCCEEEEcCCC---HHHHHHHHHHhhcCC
Q 014320 274 RAIRLAEFVNTPLYVVHVMS---MDAMEEIAKARKAGQ 308 (427)
Q Consensus 274 ~~~~~~~~~g~~~~i~H~~~---~~~~~~i~~~~~~G~ 308 (427)
. .++...|..+|++|... ...-+.++.+.+.++
T Consensus 259 -~-t~~a~~g~~iH~~H~egaggghapdii~~~~~~~v 294 (568)
T PRK13207 259 -D-TIAAFKGRTIHTFHTEGAGGGHAPDIIKVAGEPNV 294 (568)
T ss_pred -H-HHHhcCCCEEEEEeecCCCcCCchHHHHHhhcCCC
Confidence 1 23334567799999763 122356777776664
No 75
>PRK13308 ureC urease subunit alpha; Reviewed
Probab=99.91 E-value=1.4e-22 Score=199.05 Aligned_cols=169 Identities=18% Similarity=0.176 Sum_probs=128.4
Q ss_pred CccEEEECcEEEcCC-CceeeeEEEeCCeEEEeeCCCCC------------CCCceEEeCCCCEEeccccccccccccCc
Q 014320 52 SSKILIKGGTVVNAH-HQQIADVYVEDGIVVAVQPNINV------------GDDVKVLDATGKFVMPGGIDPHTHLAMEF 118 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~-~~~~~~i~i~~g~I~~vg~~~~~------------~~~~~viD~~g~~v~PG~ID~H~H~~~~~ 118 (427)
..|++|+|++|+++. +...++|.|+||||++|++.... ..++++||++|++|+|||||+|+|+..+
T Consensus 67 ~~DlVItNa~IIDp~~Gi~kaDIgIkDGrIaaIG~~~npd~~~gv~p~~~~g~~teVIDaeG~IVtPG~ID~HVH~~~P- 145 (569)
T PRK13308 67 ALDFVLCNVTVIDPVLGIVKGDIGIRDGRIVGIGKAGNPDIMDGVDPRLVVGPGTDVRPAEGLIATPGAIDVHVHFDSA- 145 (569)
T ss_pred cCCEEEECeEEEcCCCCeEEeEEEEECCEEEEecCCCCccccccccccccCCCCCeEEECCCCEEEeCEEEeeeCCCCc-
Confidence 468999999999864 46678999999999999975311 1356899999999999999999999765
Q ss_pred CCCCChhhHHHHHHHHHcCCceEEecCcCCC----CCcHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHH
Q 014320 119 MGSETIDDFFSGQAAALAGGTTMHIDFVIPI----NGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKE 194 (427)
Q Consensus 119 ~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 194 (427)
+. .++++++||||+++++..+ .......++.+.+......+++++++... ....+++.+++ +
T Consensus 146 -g~---------~~aALagGVTTVi~gg~gPt~p~~t~g~~~i~~~l~aa~~~pvN~g~~gkG~---~s~~aeL~eli-~ 211 (569)
T PRK13308 146 -QL---------VDHALASGITTMLGGGLGPTVGIDSGGPFNTGRMLQAAEAWPVNFGFLGRGN---SSKPAALIEQV-E 211 (569)
T ss_pred -cH---------HHHHHcCCCcEEecCCcCCCCCCCCCCHHHHHHHHHHHhcCCccEEEEcCCc---ccCHHHHHHHH-H
Confidence 21 3789999999999864221 11334455555555555678888775422 12356778777 7
Q ss_pred cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChh
Q 014320 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGD 239 (427)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~ 239 (427)
.|+.+||++.++. .+++.+.++++.|+++|+++.+|++...
T Consensus 212 aGA~GfKi~ed~g----~t~~~i~~aL~~A~~~dv~VaiHadtln 252 (569)
T PRK13308 212 AGACGLKIHEDWG----AMPAAIDTCLEVADEYDFQVQLHTDTLN 252 (569)
T ss_pred CCCCEEeecCCCC----CCHHHHHHHHHHHHhcCCEEEEeCCCcC
Confidence 8999999886652 4789999999999999999999997643
No 76
>PRK09230 cytosine deaminase; Provisional
Probab=99.91 E-value=6.2e-22 Score=195.63 Aligned_cols=311 Identities=18% Similarity=0.183 Sum_probs=175.1
Q ss_pred ccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCC-CCceEEeCCCCEEeccccccccccccCcCCC----------
Q 014320 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVG-DDVKVLDATGKFVMPGGIDPHTHLAMEFMGS---------- 121 (427)
Q Consensus 53 ~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~-~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~---------- 121 (427)
..++|+|++|+++.. ..+|+|+||+|++|++..+.. ++.++||++|++|||||||+|+|+...+...
T Consensus 4 ~~~li~~~~~~~~~~--~~~i~i~~g~I~~i~~~~~~~~~~~~~id~~g~~v~PGlid~H~H~~~~~~~~~~~~~~~~~l 81 (426)
T PRK09230 4 ALMTIKNARLPGKEG--LWQITIEDGKISAIEPQSEASLEAGEVLDAEGGLAIPPFIEPHIHLDTTQTAGEPNWNQSGTL 81 (426)
T ss_pred ceEEEECcEEcCCCe--eEEEEEECCEEEEecCCCCCCCCCCceEeCCCCEeccceeEEEEccccceecCCCccCCCCCH
Confidence 568999999988543 368999999999999864322 3568999999999999999999998752211
Q ss_pred -------------CChhhHH----HHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhc--cccceeceec--c--cc
Q 014320 122 -------------ETIDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK--NSCMDYGFHM--A--IT 178 (427)
Q Consensus 122 -------------~~~e~~~----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~--~~ 178 (427)
.++++++ .....++++|||++.++..+... ....++...+... +...+.++.. . ..
T Consensus 82 ~~~i~~~~~~~~~~t~ed~~~~a~~~~~e~l~~GvTtvr~~~d~~~~-~~~~~~a~~~~~~~~~~~~~~~i~a~~~~~~~ 160 (426)
T PRK09230 82 FEGIERWAERKALLTHEDVKQRAWQTLKWQIANGIQHVRTHVDVSDP-TLTALKAMLEVKEEVAPWVDLQIVAFPQEGIL 160 (426)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCcccEEeccccCCc-chhHHHHHHHHHHHhhCcceEEEEeccCcccc
Confidence 1223332 23455699999999998654222 1122222221111 1122222211 1 01
Q ss_pred CCChhhHHHHHHHHHHcCCCeEEEEEecCCCccC--CHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcCCCC
Q 014320 179 KWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMI--NDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITG 255 (427)
Q Consensus 179 ~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~--~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~~ 255 (427)
. .+...+.+++.. +.+.+.+ ...++..... +++.++.+++.|+++|+++++|+ |.........
T Consensus 161 ~-~~~~~~~l~~a~-~~~~~~v--g~~p~~~~~~~~~~e~l~~~~~~A~~~g~~~~~H~~E~~~~~~~~~---------- 226 (426)
T PRK09230 161 S-YPNGEALLEEAL-RLGADVV--GAIPHFEFTREYGVESLHKAFALAQKYDRLIDVHCDEIDDEQSRFV---------- 226 (426)
T ss_pred C-CccHHHHHHHHH-HcCCCEE--eCCCCccccchhHHHHHHHHHHHHHHhCCCcEEEECCCCCcchHHH----------
Confidence 1 112223334433 3444422 2223333333 57899999999999999999997 5543322111
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHh--cCCCEEEEcCCCHH------HHHHHHHHhhcCCCEEEecCccceeeCccccc
Q 014320 256 PEGHALSRPPLLEGEATTRAIRLAEF--VNTPLYVVHVMSMD------AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLW 327 (427)
Q Consensus 256 ~~~~~~~~p~~~e~~a~~~~~~~~~~--~g~~~~i~H~~~~~------~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~ 327 (427)
...+++... .+.++.+.|+.... .-+.++.+++.|+.|++ ||...+......
T Consensus 227 -----------------~~~~~~~~~~gl~~~v~~~H~~~l~~~~~~~~~~~~~~La~~gv~vv~--cP~sn~~l~~~~- 286 (426)
T PRK09230 227 -----------------ETVAALAHREGMGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVA--NPLVNIHLQGRF- 286 (426)
T ss_pred -----------------HHHHHHHHHhCCCCCEEEEecCchhcCCHHHHHHHHHHHHHcCCeEEE--CcchhhhhcCCC-
Confidence 111222222 24578899988762 34688999999988776 776432111100
Q ss_pred CCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhc
Q 014320 328 HSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVES 407 (427)
Q Consensus 328 ~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~ 407 (427)
.. .|.+. ....+.++++.|+.++||||+. .+. | .+.|...+-..+.... ...+.
T Consensus 287 ----------~~-~p~~~--g~~pi~~l~~aGv~V~lGTD~~-~d~---------~--~~~~~~d~~~~~~~~~-~~~~~ 340 (426)
T PRK09230 287 ----------DT-YPKRR--GITRVKEMLEAGINVCFGHDDV-FDP---------W--YPLGTANMLQVLHMGL-HVCQL 340 (426)
T ss_pred ----------CC-CCCCC--CCcCHHHHHHCCCeEEEecCCC-CCC---------C--cCCCCCCHHHHHHHHH-HHHhh
Confidence 00 11100 1122667999999999999963 211 1 1222222211111111 01111
Q ss_pred CCC-CHHHHHHHHchhhhcC
Q 014320 408 GQI-SVTDYVRLTSTEWGRL 426 (427)
Q Consensus 408 ~~l-~l~~~v~~~t~npA~~ 426 (427)
... ++.++++++|.||||.
T Consensus 341 ~~~~~~~~~l~maT~~gA~a 360 (426)
T PRK09230 341 MGYGQINDGLNLITTHSART 360 (426)
T ss_pred CChhhHHHHHHHHhcchhHH
Confidence 112 3689999999999984
No 77
>PRK09229 N-formimino-L-glutamate deiminase; Validated
Probab=99.91 E-value=5.5e-23 Score=205.55 Aligned_cols=304 Identities=13% Similarity=0.047 Sum_probs=180.6
Q ss_pred cEEEECcEEEcCCCceeeeEEEeC-CeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcC-C-----------
Q 014320 54 KILIKGGTVVNAHHQQIADVYVED-GIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G----------- 120 (427)
Q Consensus 54 ~~~i~~~~i~~~~~~~~~~i~i~~-g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g----------- 120 (427)
.++++++.+.++ ...+++|+|+| |||++||+... ++ .++.+|++|||||||+|+|+.+.+. |
T Consensus 4 ~~~~~~~~~~~~-~~~~~~v~i~~~grI~~vg~~~~-~~---~~~~~g~~vlPGlVn~H~H~~~~~~rg~~~~~~~~~~~ 78 (456)
T PRK09229 4 TLFAERALLPDG-WARNVRLTVDADGRIAAVEPGAA-PA---GAERLAGPVLPGMPNLHSHAFQRAMAGLTEVRGPPQDS 78 (456)
T ss_pred hHHHHHhhCCCc-cccCcEEEEecCCeEEEecCCCC-Cc---cccccCcEEccCcccccccHhhHhhcCcccccCCCCCC
Confidence 345556655333 24678999999 99999998543 22 2456899999999999999875411 1
Q ss_pred -------------CCChhhHH----HHHHHHHcCCceEEecCcCCCCC-----------cHHHHHHHHHHHhccccceec
Q 014320 121 -------------SETIDDFF----SGQAAALAGGTTMHIDFVIPING-----------SLTAGFEAYEKKAKNSCMDYG 172 (427)
Q Consensus 121 -------------~~~~e~~~----~~~~~~l~~GvTtv~d~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 172 (427)
..++++.+ .++..++++||||+.|+...... .....++..++.+.|..+...
T Consensus 79 l~~w~~~~~~~~~~~~~e~~~~~a~~~~~e~L~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~e~GiR~~~~~~ 158 (456)
T PRK09229 79 FWSWRELMYRFALRLTPDQLEAIARQLYVEMLEAGYTSVGEFHYLHHDPDGTPYADPAEMALRIVAAARAAGIGLTLLPV 158 (456)
T ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCCcEEEeeeeeccCCCCCccCChHHHHHHHHHHHHHcCCEEEecee
Confidence 01122222 23345699999999997522110 124456666676666433221
Q ss_pred eec--cc---cC---------CChhhHHHHHHHHHH-cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-C
Q 014320 173 FHM--AI---TK---------WDEVVSDEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-E 236 (427)
Q Consensus 173 ~~~--~~---~~---------~~~~~~~~~~~l~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e 236 (427)
... +. .. ..++..+..+++.+. .+...+.+.+.+++...++++.++++++.| ++|+++++|+ |
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~s~e~l~~~~~~A-~~g~~i~~H~~e 237 (456)
T PRK09229 159 LYAHSGFGGQPPNPGQRRFINDPDGFLRLLEALRRALAALPGARLGLAPHSLRAVTPDQLAAVLALA-APDGPVHIHIAE 237 (456)
T ss_pred eeecCCCCCCCCchhhcccccCHHHHHHHHHHHHHhhcCCCceEEEEeCCCCCCCCHHHHHHHHHHh-cCCCceEEEeCC
Confidence 110 00 00 011122223333321 223457778888888889999999999999 9999999998 6
Q ss_pred ChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCc
Q 014320 237 NGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVV 316 (427)
Q Consensus 237 ~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p 316 (427)
+..++..+.+ ..|.. | ++ .+......+.++.+.|+...+. +.++++++.|+.+++ ||
T Consensus 238 ~~~e~~~~~~---~~g~~---------~-------~~-~l~~~g~l~~~~~l~H~~~l~~-~d~~~la~~g~~v~~--~P 294 (456)
T PRK09229 238 QTKEVDDCLA---WSGAR---------P-------VE-WLLDHAPVDARWCLVHATHLTD-AETARLARSGAVAGL--CP 294 (456)
T ss_pred CHHHHHHHHH---HcCCC---------H-------HH-HHHHcCCCCCCeEEEeeccCCH-HHHHHHHHcCCeEEE--Cc
Confidence 6655544432 22321 1 01 1111223456778899887765 668888999987765 77
Q ss_pred cceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHh
Q 014320 317 SGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEER 396 (427)
Q Consensus 317 ~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~ 396 (427)
.... ..|. ..+| ++++++.|+.+.+|||..+...... +.+
T Consensus 295 ~sn~-----------~lg~---g~~p---------~~~l~~~Gv~v~lGtD~~~~~d~~~-----------------~~~ 334 (456)
T PRK09229 295 TTEA-----------NLGD---GIFP---------AVDYLAAGGRFGIGSDSHVSIDLVE-----------------ELR 334 (456)
T ss_pred hhhh-----------hhcC---CCCC---------HHHHHHCCCeEEEecCCCCCCCHHH-----------------HHH
Confidence 5321 1111 1244 4568999999999999633211111 122
Q ss_pred HHHHHHHHHh---------cCCCCHHHHHHHHchhhhcC
Q 014320 397 MHLVWDTMVE---------SGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 397 l~~~~~~~~~---------~~~l~l~~~v~~~t~npA~~ 426 (427)
+.....+... ...++..++++++|.|+|+.
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~a 373 (456)
T PRK09229 335 LLEYGQRLRDRRRNVLAAAAQPSVGRRLFDAALAGGAQA 373 (456)
T ss_pred HHHHHHHHhhcCCcccccccccchHHHHHHHHHHHHHHH
Confidence 2222211111 13678999999999999974
No 78
>cd01296 Imidazolone-5PH Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate. In bacteria, the enzyme is part of histidine utilization (hut) operon.
Probab=99.90 E-value=2.3e-22 Score=196.58 Aligned_cols=273 Identities=21% Similarity=0.191 Sum_probs=162.3
Q ss_pred EEEeCCeEEEeeCCCCCC----CCceEEeCCCCEEeccccccccccccCcC----------CC-----------------
Q 014320 73 VYVEDGIVVAVQPNINVG----DDVKVLDATGKFVMPGGIDPHTHLAMEFM----------GS----------------- 121 (427)
Q Consensus 73 i~i~~g~I~~vg~~~~~~----~~~~viD~~g~~v~PG~ID~H~H~~~~~~----------g~----------------- 121 (427)
|+|+||||++||+....+ .+.++||++|++|+|||||+|+|+.+... +.
T Consensus 1 i~i~~g~I~~ig~~~~~~~~~~~~~~~iD~~G~~v~Pg~vn~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (371)
T cd01296 1 IAIRDGRIAAVGPAASLPAPGPAAAEEIDAGGRAVTPGLVDCHTHLVFAGDRVDEFAARLAGASYEEILAAGGGILSTVR 80 (371)
T ss_pred CEEECCEEEEEeCchhcccccCCCceEEECCCCEEecceeecCCCCcCCCCcHHHHHHHHCCCCHHHHHHcCCChHHHHH
Confidence 679999999999864432 35689999999999999999999976421 10
Q ss_pred ----CChhhHHH----HHHHHHcCCceEEecCcCCCCC--cHHHHHHHHHHHhccccceec--eec--cccC-C--Chhh
Q 014320 122 ----ETIDDFFS----GQAAALAGGTTMHIDFVIPING--SLTAGFEAYEKKAKNSCMDYG--FHM--AITK-W--DEVV 184 (427)
Q Consensus 122 ----~~~e~~~~----~~~~~l~~GvTtv~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~-~--~~~~ 184 (427)
.++++++. ....++++|||++.+....... ...+.++..++.+.+..+.+. +.. .... . .++.
T Consensus 81 ~~~~~~~~d~~~~a~~~~~~~~~~Gvt~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~~~~~p~~~~~~~~~ 160 (371)
T cd01296 81 ATRAASEDELFASALRRLARMLRHGTTTVEVKSGYGLDLETELKMLRVIRRLKEEGPVDLVSTFLGAHAVPPEYKGREEY 160 (371)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHCCceEEEecccCCCCHHHHHHHHHHHHHHHhhCCCceEeeeeecccCCcccCChHHH
Confidence 12233322 3456799999999984211111 233345555555443222221 110 1110 0 1111
Q ss_pred HHH-HHHHHH----HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccc
Q 014320 185 SDE-MEVMVK----EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (427)
Q Consensus 185 ~~~-~~~l~~----~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~ 259 (427)
.+. ..++.+ ..++..++++... ...+.+.++++++.|+++|+++++|+.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~A~~~g~~v~~H~~e~~~~~----------------- 220 (371)
T cd01296 161 IDLVIEEVLPAVAEENLADFCDVFCEK---GAFSLEQSRRILEAAKEAGLPVKIHADELSNIG----------------- 220 (371)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEeecC---CccCHHHHHHHHHHHHHCCCeEEEEEcCcCCCC-----------------
Confidence 111 122221 2456777775432 235688999999999999999999985432110
Q ss_pred cccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEE
Q 014320 260 ALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVM 339 (427)
Q Consensus 260 ~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~ 339 (427)
.+ +.+...+. ..+.|+...+. +.++++++.|+.+.. ||...+... ..
T Consensus 221 -----------~~----~~~~~~g~-~~i~H~~~~~~-~~i~~la~~g~~v~~--~P~~~~~l~-----------~~--- 267 (371)
T cd01296 221 -----------GA----ELAAELGA-LSADHLEHTSD-EGIAALAEAGTVAVL--LPGTAFSLR-----------ET--- 267 (371)
T ss_pred -----------HH----HHHHHcCC-CeeHHhcCCCH-HHHHHHHHcCCeEEE--ChHHHHHhC-----------CC---
Confidence 00 11112232 33677765543 778889999987765 665332110 11
Q ss_pred cCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHH
Q 014320 340 SPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLT 419 (427)
Q Consensus 340 ~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~ 419 (427)
.+| ++++++.|+++++|||+.|+.... ..++..+...+...+++++++++++
T Consensus 268 ~~~---------~~~l~~~Gv~v~lgsD~~p~~~~~-------------------~~l~~~~~~~~~~~~l~~~~al~~a 319 (371)
T cd01296 268 YPP---------ARKLIDAGVPVALGTDFNPGSSPT-------------------SSMPLVMHLACRLMRMTPEEALTAA 319 (371)
T ss_pred CCC---------HHHHHHCCCcEEEecCCCCCCChH-------------------HHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 344 456899999999999986643211 1122233233445689999999999
Q ss_pred chhhhcC
Q 014320 420 STEWGRL 426 (427)
Q Consensus 420 t~npA~~ 426 (427)
|.|||++
T Consensus 320 T~~~A~~ 326 (371)
T cd01296 320 TINAAAA 326 (371)
T ss_pred HHHHHHH
Confidence 9999984
No 79
>PRK13309 ureC urease subunit alpha; Reviewed
Probab=99.90 E-value=7.9e-22 Score=195.77 Aligned_cols=169 Identities=18% Similarity=0.178 Sum_probs=125.9
Q ss_pred CccEEEECcEEEcCC-CceeeeEEEeCCeEEEeeCCCCC------------CCCceEEeCCCCEEeccccccccccccCc
Q 014320 52 SSKILIKGGTVVNAH-HQQIADVYVEDGIVVAVQPNINV------------GDDVKVLDATGKFVMPGGIDPHTHLAMEF 118 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~-~~~~~~i~i~~g~I~~vg~~~~~------------~~~~~viD~~g~~v~PG~ID~H~H~~~~~ 118 (427)
..|++|+|++|+|+. +...++|.|+||||++||+.... ..++++||++|++|+|||||+|+|+..+
T Consensus 67 ~~DlVI~Ng~ViD~~~gi~kaDI~IkdGrI~aIG~~~~p~~~~~v~~~~~~g~~tevIDa~G~iVtPG~ID~HvH~~~P- 145 (572)
T PRK13309 67 VLDLVITNVTIVDARLGVIKADVGIRDGKIVGIGKSGNPSTMDGVTQGMVVGVSTDAISGEHLILTAAGIDTHIHLISP- 145 (572)
T ss_pred cCCEEEECeEEEcCCCCEEEEEEEEECCEEEEecCCCccccccccccccccCCCceEEECCCCEEEeCEEEeecccCCc-
Confidence 468999999999953 46688999999999999874321 1236899999999999999999998776
Q ss_pred CCCCChhhHHHHHHHHHcCCceEEecCcCCC----C----CcHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHH
Q 014320 119 MGSETIDDFFSGQAAALAGGTTMHIDFVIPI----N----GSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEV 190 (427)
Q Consensus 119 ~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (427)
+. .++++.+||||+++++..+ + ......++.+.+......+++++++.. .. ....++.+
T Consensus 146 -~~---------~~aAl~gGVTTvi~~G~gp~~~~n~~~~t~g~~~i~~~l~~a~~~pvn~g~~gkg--~~-~~~~~l~e 212 (572)
T PRK13309 146 -QQ---------AYHALSNGVTTFFGGGIGPTDGTNGTTVTPGPWNIRQMLRSIEGLPVNVGILGKG--NS-YGRGPLLE 212 (572)
T ss_pred -ch---------HHHHHcCceEEEEecCCCCccCCCCCCCCCCHHHHHHHHHHhccCCcCEEEEcCC--CC-CCHHHHHH
Confidence 21 3579999999999753111 1 123445666655555566788776532 11 22356677
Q ss_pred HHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChh
Q 014320 191 MVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGD 239 (427)
Q Consensus 191 l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~ 239 (427)
++ +.|+.+||++.++. .+++.+.++++.|+++|.++.+|+++-.
T Consensus 213 l~-~aGa~gfk~~~d~g----~t~~~L~~aLe~A~~~gv~VaiH~d~ln 256 (572)
T PRK13309 213 QA-IAGVAGYKVHEDWG----ATAAALRHALRVADEVDIQVAVHTDSLN 256 (572)
T ss_pred HH-hcCcEEEEecCcCC----cCHHHHHHHHHHHHhcCCEEEEeCCccc
Confidence 66 78999999876553 4889999999999999999999987653
No 80
>PRK07583 cytosine deaminase-like protein; Validated
Probab=99.90 E-value=1e-21 Score=195.40 Aligned_cols=308 Identities=19% Similarity=0.171 Sum_probs=176.2
Q ss_pred ccEEEECcEEEcC------------CCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCC
Q 014320 53 SKILIKGGTVVNA------------HHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG 120 (427)
Q Consensus 53 ~~~~i~~~~i~~~------------~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g 120 (427)
..++|+|+++-+. ++....+|.|+||||++|++....+.+.++||++|++|+|||||+|+|+...+..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~dg~i~~i~~~~~~~~~~~~id~~g~~v~Pg~id~H~Hld~~~~~ 90 (438)
T PRK07583 11 GRYWLKNARVPAALLEGGVPPGDTLEGLVLVDIEIADGKIAAILPAGGAPDELPAVDLKGRMVWPCFVDMHTHLDKGHIW 90 (438)
T ss_pred CcEEEeccccccccccCccCCCcCCCCcEEEEEEEECCEEEEEecCCCCCCCCceecCCCCcccCCcccceeccccceec
Confidence 4478888876321 1234679999999999999875433457899999999999999999998664111
Q ss_pred C-----------------------CChhh----HHHHHHHHHcCCceEEecCcCC-CC--CcHHHHHHHHHHHh-ccc--
Q 014320 121 S-----------------------ETIDD----FFSGQAAALAGGTTMHIDFVIP-IN--GSLTAGFEAYEKKA-KNS-- 167 (427)
Q Consensus 121 ~-----------------------~~~e~----~~~~~~~~l~~GvTtv~d~~~~-~~--~~~~~~~~~~~~~~-~~~-- 167 (427)
. .+.++ +..+.+.++..|+|+++..... .. ....+.+....+.. .+.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~a~~~Gtt~vRt~vd~~~~~~~~~~~~i~~~~~~~~~~~~~ 170 (438)
T PRK07583 91 PRSPNPDGTFPGALDAVTADREAHWSAEDLYRRMEFGLRCAYAHGTSAIRTHLDSFAPQAAISWEVFAELREAWAGRIAL 170 (438)
T ss_pred CCCCCCCCCHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhChhhEEeeeccCCCCcccHHHHHHHHHHHhhccCeE
Confidence 0 01233 4456677899999966654321 11 11222232222221 111
Q ss_pred --cceeceeccccCCChhhHHHHHHHHHHc-CCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHH
Q 014320 168 --CMDYGFHMAITKWDEVVSDEMEVMVKEK-GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFE 243 (427)
Q Consensus 168 --~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~ 243 (427)
...+.+++... ++ .+++.+.+... |+.+.+.++.+ -+++.+.++++.|+++|+++.+|+ |+......
T Consensus 171 ~~v~~~p~~~~~~---~~-~~eL~~~v~~~~gv~g~~~~~~~-----~~d~~l~~i~~lA~~~G~~v~vH~~E~~~~~~~ 241 (438)
T PRK07583 171 QAVSLVPLDAYLT---DA-GERLADLVAEAGGLLGGVTYMNP-----DLDAQLDRLFRLARERGLDLDLHVDETGDPASR 241 (438)
T ss_pred EEEEecChhhccC---ch-HHHHHHHHHHcCCEEeCCCCCCC-----CHHHHHHHHHHHHHHhCCCcEEeECCCCCchHH
Confidence 11122222111 11 24555555333 34343332221 256889999999999999999998 65433221
Q ss_pred HHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcC--CCEEEEcCCCHH------HHHHHHHHhhcCCCEEEecC
Q 014320 244 GQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVN--TPLYVVHVMSMD------AMEEIAKARKAGQRVIGEPV 315 (427)
Q Consensus 244 ~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g--~~~~i~H~~~~~------~~~~i~~~~~~G~~v~~~~~ 315 (427)
.. ....+.+.+.| .++.++|+.... ..+.++++++.|+.++. |
T Consensus 242 ~l---------------------------~~~~~~~~~~G~~~~v~i~H~~~l~~~~~~~~~~~i~~la~~gv~vv~--~ 292 (438)
T PRK07583 242 TL---------------------------KAVAEAALRNGFEGKVTCGHCCSLAVQPEEQAQATIALVAEAGIAIVS--L 292 (438)
T ss_pred HH---------------------------HHHHHHHHHhCCCCCEEEEeccchhcCCHHHHHHHHHHHHHcCCeEEE--C
Confidence 11 11122222222 368899987643 13678999999988875 7
Q ss_pred ccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCC-Cchhh
Q 014320 316 VSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNG-VNGIE 394 (427)
Q Consensus 316 p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G-~~~~e 394 (427)
|...+....... ...|+.+. ...+.++++.|+.+++|||+.+- +| . |.| ...++
T Consensus 293 P~~~~~l~~~~~----------~~~p~~~~---~~~v~~l~~aGV~valGtD~~~d----------~~-~-p~g~~~~~~ 347 (438)
T PRK07583 293 PMCNLYLQDRQP----------GRTPRWRG---VTLVHELKAAGIPVAVASDNCRD----------PF-Y-AYGDHDMLE 347 (438)
T ss_pred cchhhhhcCCCc----------CCCCCCCC---cchHHHHHHCCCeEEEEeCCCCC----------CC-C-CCCCcCHHH
Confidence 764332211110 01232322 23466788899999999998531 11 1 222 11222
Q ss_pred HhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 395 ERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 395 ~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
....... . .....++.++++++|.|||++
T Consensus 348 ~~~~a~~--~-~~~~~~~~~al~~~T~~~A~~ 376 (438)
T PRK07583 348 VFREAVR--I-LHLDHPYDDWPAAVTTTPADI 376 (438)
T ss_pred HHHHHHH--H-HhcCCcHHHHHHHHhHHHHHH
Confidence 2222211 1 123578999999999999984
No 81
>PRK09237 dihydroorotase; Provisional
Probab=99.90 E-value=7.8e-22 Score=193.09 Aligned_cols=179 Identities=21% Similarity=0.216 Sum_probs=114.8
Q ss_pred EEEECcEEEcCCC--ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHHH
Q 014320 55 ILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQA 132 (427)
Q Consensus 55 ~~i~~~~i~~~~~--~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~ 132 (427)
++|+|++|+++.. ....+|+|+||||++|++..+.+.+.++||++|++|+|||||+|+|+... +.. .+. +..+
T Consensus 1 ~~i~~~~v~d~~~~~~~~~~v~i~~g~I~~v~~~~~~~~~~~~iD~~g~~v~PG~iD~H~H~~~~--~~~-~~~--~~~~ 75 (380)
T PRK09237 1 LLLRGGRVIDPANGIDGVIDIAIEDGKIAAVAGDIDGSQAKKVIDLSGLYVSPGWIDLHVHVYPG--STP-YGD--EPDE 75 (380)
T ss_pred CEEEeEEEECCCCCcccceEEEEECCEEEEecCCCCCCCCCeEEECCCCEEecCEEEeeecCCCC--CCc-cCC--CHHH
Confidence 3799999998764 35689999999999998764433356899999999999999999999854 211 111 3467
Q ss_pred HHHcCCceEEecCcCCCCCcHHHHHHHHHHH-hc--cccceeceeccccC-C----ChhhHHHHHHHHHH--cCCCeEEE
Q 014320 133 AALAGGTTMHIDFVIPINGSLTAGFEAYEKK-AK--NSCMDYGFHMAITK-W----DEVVSDEMEVMVKE--KGINSFKF 202 (427)
Q Consensus 133 ~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~-~----~~~~~~~~~~l~~~--~g~~~ik~ 202 (427)
.++.+||||++|+............+...+. +. ..++++...+.... . .....++++++..+ .++.++|.
T Consensus 76 ~~~~~G~Ttv~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~glk~ 155 (380)
T PRK09237 76 VGVRSGVTTVVDAGSAGADNFDDFRKLTIEASKTRVLAFLNISRIGLLAQDELADLEDIDADAVAEAVKRNPDFIVGIKA 155 (380)
T ss_pred HHHhCCcCEEEECCCCCCCCHHHHHHHHHhhhCcEEEEEEeeecccccccchhcCHhHCCHHHHHHHHHhCcCcEEEEEE
Confidence 8999999999998754433333333333322 22 23344443332211 1 11234556666642 46889999
Q ss_pred EEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCCh
Q 014320 203 FMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (427)
Q Consensus 203 ~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~ 238 (427)
++.+........+.++.....+++.|+++.+|+++.
T Consensus 156 ~~~~~v~~~~~~~~~~~~~~~a~~~g~~v~~H~~~~ 191 (380)
T PRK09237 156 RMSSSVVGDNGIEPLELAKAIAAEANLPLMVHIGNP 191 (380)
T ss_pred EEecccccccCCchHHHHHHHHHhcCCCEEEEcCCC
Confidence 987642222111334444455668999999998654
No 82
>TIGR01224 hutI imidazolonepropionase. This enzyme catalyzes the third step in histidine degradation.
Probab=99.90 E-value=7.6e-22 Score=193.26 Aligned_cols=276 Identities=16% Similarity=0.136 Sum_probs=156.7
Q ss_pred eeeeEEEeCCeEEEeeCCCCCCC--CceEEeCCCCEEeccccccccccccCcC----------CC---------------
Q 014320 69 QIADVYVEDGIVVAVQPNINVGD--DVKVLDATGKFVMPGGIDPHTHLAMEFM----------GS--------------- 121 (427)
Q Consensus 69 ~~~~i~i~~g~I~~vg~~~~~~~--~~~viD~~g~~v~PG~ID~H~H~~~~~~----------g~--------------- 121 (427)
++++|+|+||+|++||+....+. +.++||++|++|||||||+|+|+..... +.
T Consensus 2 ~~~~v~i~~g~I~~vg~~~~~~~~~~~~~iD~~g~~v~PGlin~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (377)
T TIGR01224 2 EDAVILIHGGKIVWIGQLAALPGEEATEIIDCGGGLVTPGLVDPHTHLVFAGDRVNEFEMKLQGASYLEILAQGGGILST 81 (377)
T ss_pred CceEEEEECCEEEEEechhhCCcccCCeEEeCCCCEEcccEEecccCccccCCcHHHHHHHhCCCCHHHHHHhcCChHHH
Confidence 46899999999999998533222 5689999999999999999999975311 00
Q ss_pred ------CChhhHHH----HHHHHHcCCceEEecCcCCCCC--cHHHHHHHHHHHhccccceecee-c---ccc----CCC
Q 014320 122 ------ETIDDFFS----GQAAALAGGTTMHIDFVIPING--SLTAGFEAYEKKAKNSCMDYGFH-M---AIT----KWD 181 (427)
Q Consensus 122 ------~~~e~~~~----~~~~~l~~GvTtv~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~---~~~----~~~ 181 (427)
.++++++. ....++++|||++.+....... .....++..++...+..+..... . ... ...
T Consensus 82 ~~~~~~~~~ed~~~~a~~~~~e~l~~Gvt~ve~~~~~g~~~~~~~~~~~a~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 161 (377)
T TIGR01224 82 VRATRAASEEELLKLALFRLKSMLRSGTTTAEVKSGYGLDLETELKMLRAAKALHEEQPVDVVTTFLGAHAVPPEFQGRP 161 (377)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHCCceEEEecccCCCCHHHHHHHHHHHHHHHhhCCCceEeeeeecccCCccccCCH
Confidence 11222222 2345699999999432111111 12233344444433321222110 0 001 001
Q ss_pred hhhHHHH-HHHHH---Hc-CCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCc
Q 014320 182 EVVSDEM-EVMVK---EK-GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGP 256 (427)
Q Consensus 182 ~~~~~~~-~~l~~---~~-g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~ 256 (427)
++..+.. +.+++ .. ++..++.+. ++ ...+.+.++++++.|+++|+++++|+........ .+.+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~--~~~~~~~~~~~~~~A~~~g~~v~~H~~e~~~~~~-~~~~~------- 230 (377)
T TIGR01224 162 DDYVDGICEELIPQVAEEGLASFADVFC-EA--GVFSVEQSRRILQAAQEAGLPVKLHAEELSNLGG-AELAA------- 230 (377)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeeEEEe-cC--CCcCHHHHHHHHHHHHHCCCCEEEEecCCCCCCH-HHHHH-------
Confidence 1112111 11221 22 356666543 22 2346789999999999999999999843211100 01111
Q ss_pred ccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCce
Q 014320 257 EGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAK 336 (427)
Q Consensus 257 ~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~ 336 (427)
..| +..+.|+...+. +.++++++.|+.++ .||...+... .
T Consensus 231 ------------------------~~g-~~~~~H~~~~~~-~~l~~la~~g~~~~--~~P~~~~~l~-----------~- 270 (377)
T TIGR01224 231 ------------------------KLG-AVSADHLEHASD-AGIKALAEAGTVAV--LLPGTTFYLR-----------E- 270 (377)
T ss_pred ------------------------HcC-CCccHHHhcCCH-HHHHHHHhcCCEEE--ECchHHHhcC-----------C-
Confidence 112 123556665543 67888889887665 4776432111 0
Q ss_pred eEEcCCCCCcccHHHHHHHHhcCCceEEecCCCC-CChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHH
Q 014320 337 YVMSPPIRASGHNKALQAALATGILQLVGTDHCA-FNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDY 415 (427)
Q Consensus 337 ~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p-~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~ 415 (427)
..+| ++++++.|+.+++|||+.| +++... +...+.......+++++++
T Consensus 271 --~~~p---------~~~l~~~Gv~v~lgTD~~~~~~~~~~--------------------~~~~~~~~~~~~~ls~~ea 319 (377)
T TIGR01224 271 --TYPP---------ARQLIDYGVPVALATDLNPGSSPTLS--------------------MQLIMSLACRLMKMTPEEA 319 (377)
T ss_pred --cCcc---------HHHHHHCCCCEEEECCCCCCCChhHH--------------------HHHHHHHHHHhcCCCHHHH
Confidence 1244 4558889999999999755 332111 1111212233567999999
Q ss_pred HHHHchhhhcC
Q 014320 416 VRLTSTEWGRL 426 (427)
Q Consensus 416 v~~~t~npA~~ 426 (427)
++++|.|||++
T Consensus 320 l~~~T~~~A~~ 330 (377)
T TIGR01224 320 LHAATVNAAYA 330 (377)
T ss_pred HHHHHHHHHHH
Confidence 99999999974
No 83
>PRK13985 ureB urease subunit beta; Provisional
Probab=99.90 E-value=1.1e-21 Score=191.98 Aligned_cols=205 Identities=17% Similarity=0.201 Sum_probs=144.3
Q ss_pred CccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCC------------CCCceEEeCCCCEEeccccccccccccCcC
Q 014320 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV------------GDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~------------~~~~~viD~~g~~v~PG~ID~H~H~~~~~~ 119 (427)
..|++|+|++|++..+...++|.|+||||++|++.... ..+.++||++|++|+|||||+|+|+..+
T Consensus 64 ~~DlVI~Na~IiD~~gi~kaDI~IkdGrIaaIG~~gn~~~~~~v~~~~~ig~~tevIDa~G~iV~PG~ID~HvH~~~P-- 141 (568)
T PRK13985 64 ELDLIITNALIIDYTGIYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTHIHFISP-- 141 (568)
T ss_pred cCCEEEECeEEECCCCcEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEECCCCEEEeCEEEeeCCCCCc--
Confidence 56899999999997666778999999999999975321 1357899999999999999999998765
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCC-----CC---cHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPI-----NG---SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM 191 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 191 (427)
+ . .+.++++||||+++++..+ .. .....++.+.+......+++++++.. .....+++.++
T Consensus 142 ~-----~----~~~AlagGVTTvI~~G~gP~~~T~p~~~tpg~~~i~~ml~~a~~~pvn~gf~gkG---~~~~l~eL~el 209 (568)
T PRK13985 142 Q-----Q----IPTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWMLRAAEEYSMNLGFLGKG---NSSNDASLADQ 209 (568)
T ss_pred c-----H----HHHHhcCceEEEEccCcCCCCCCCCcCCCCcHHHHHHHHHHhhccCccEEEecCC---ccCCHHHHHHH
Confidence 2 1 2458999999999953211 11 12222444445444556778776532 12335677777
Q ss_pred HHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHH
Q 014320 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (427)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a 271 (427)
. +.|+.++|.+.++ ..++..+.++++.|+++|.++.+|+++..+....
T Consensus 210 ~-~aGA~GfK~~ed~----g~t~~~I~~aL~vA~~~dv~V~iHtdtlne~g~~--------------------------- 257 (568)
T PRK13985 210 I-EAGAIGFKIHEDW----GTTPSAINHALDVADKYDVQVAIHTDTLNEAGCV--------------------------- 257 (568)
T ss_pred H-HcCCEEEEECCcc----CCCHHHHHHHHHHHHHcCCEEEEeCCCCCCchhh---------------------------
Confidence 7 7899999976544 3688999999999999999999999765433111
Q ss_pred HHHHHHHHHhcCCCEEEEcCCCH---HHHHHHHHHhh
Q 014320 272 TTRAIRLAEFVNTPLYVVHVMSM---DAMEEIAKARK 305 (427)
Q Consensus 272 ~~~~~~~~~~~g~~~~i~H~~~~---~~~~~i~~~~~ 305 (427)
+ . .++...|..+|++|+... ..-++++.+..
T Consensus 258 -E-~-t~aa~~gr~iH~~H~egaggghapdi~~~~~~ 291 (568)
T PRK13985 258 -E-D-TMAAIAGRTMHTFHTEGAGGGHAPDIIKVAGE 291 (568)
T ss_pred -H-H-HHHHhcCCeEEEEeccCCCccchhhHHHHcCC
Confidence 1 1 333446788999999763 22345554433
No 84
>cd00375 Urease_alpha Urease alpha-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide. Nickel-dependent ureases are found in bacteria, fungi and plants. Their primary role is to allow the use of external and internally generated urea as a nitrogen source. The enzyme consists of 3 subunits, alpha, beta and gamma, which can be fused and present on a single protein chain and which in turn forms multimers, mainly trimers. The large alpha subunit is the catalytic domain containing an active site with a bi-nickel center complexed by a carbamylated lysine. The beta and gamma subunits play a role in subunit association to form the higher order trimers.
Probab=99.90 E-value=9.4e-22 Score=193.25 Aligned_cols=193 Identities=18% Similarity=0.202 Sum_probs=144.0
Q ss_pred CccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCC------------CCCceEEeCCCCEEeccccccccccccCcC
Q 014320 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV------------GDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~------------~~~~~viD~~g~~v~PG~ID~H~H~~~~~~ 119 (427)
..+++|+|++|++..+...++|.|+||||++|++.... ..++++||++|++|+|||||+|+|+..+
T Consensus 64 ~~DlVI~Na~IiD~~gi~~adI~IkdGrIvaIG~agnp~~~~~v~~~~~~g~~teVIDaeG~iV~PG~ID~HvH~~~P-- 141 (567)
T cd00375 64 VLDLVITNALIIDYTGIYKADIGIKDGRIVAIGKAGNPDIMDGVTPNMIVGPSTEVIAGEGKIVTAGGIDTHVHFICP-- 141 (567)
T ss_pred cCCEEEECeEEECCCCcEEEEEEEECCEEEEEecCCCccccccccccccCCCCCeEEECCCCEEeeceEECccCCCCc--
Confidence 46899999999997766789999999999999975321 1346899999999999999999998765
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCC----C---C-cHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPI----N---G-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM 191 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~----~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 191 (427)
+. .++++++||||+++++..+ + . .....++.+.+......+++++++.. ..+.++++.++
T Consensus 142 ~~---------~~aAlagGVTTvI~~G~gP~~gtnatp~t~g~~~l~~ml~aa~~~pin~g~~gkg---~~~~l~eL~e~ 209 (567)
T cd00375 142 QQ---------IEEALASGITTMIGGGTGPAAGTKATTCTPGPWNIKRMLQAADGLPVNIGFLGKG---NGSSPDALAEQ 209 (567)
T ss_pred cH---------HHHHHcCCCcEEEcCCcCcccccCCCCCCCCHHHHHHHHHHhhcCCceEEEEecC---ccccHHHHHHH
Confidence 21 4689999999999973221 1 1 23455666655555667888876532 23445677777
Q ss_pred HHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHH
Q 014320 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (427)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a 271 (427)
+ +.|+.+||++.++. .++..+.++++.|+++|.++.+|+++..+....
T Consensus 210 ~-~aGA~GfK~~eD~g----~t~~~i~~aL~~A~~~dv~VaiHadtlne~g~~--------------------------- 257 (567)
T cd00375 210 I-EAGACGLKLHEDWG----ATPAAIDTCLSVADEYDVQVAIHTDTLNESGFV--------------------------- 257 (567)
T ss_pred H-HcCCEEEEecCCCC----CCHHHHHHHHHHHHhhCCEEEEECCCCCcchHH---------------------------
Confidence 7 78999999886653 589999999999999999999999765432111
Q ss_pred HHHHHHHHHhcCCCEEEEcCCC
Q 014320 272 TTRAIRLAEFVNTPLYVVHVMS 293 (427)
Q Consensus 272 ~~~~~~~~~~~g~~~~i~H~~~ 293 (427)
+. .++...|..+|++|...
T Consensus 258 --E~-t~aa~~gr~iH~~H~eg 276 (567)
T cd00375 258 --ED-TIAAIKGRTIHTYHTEG 276 (567)
T ss_pred --HH-HHHHhcCCeEEEEecCC
Confidence 11 34556788899999976
No 85
>cd01307 Met_dep_hydrolase_B Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.89 E-value=1.3e-21 Score=188.38 Aligned_cols=162 Identities=19% Similarity=0.151 Sum_probs=110.5
Q ss_pred eEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCC
Q 014320 72 DVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING 151 (427)
Q Consensus 72 ~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~ 151 (427)
+|+|+||||++|++....+.+.++||++|++|+|||||+|+|+..+ +..+.+ ...++++.+||||++|+......
T Consensus 1 ~i~i~~g~I~~i~~~~~~~~~~~~id~~g~~v~PG~iD~H~H~~~~--g~~~~~---~~~~~a~~~GvTtvvd~~~~~~~ 75 (338)
T cd01307 1 DVAIENGKIAAVGAALAAPAATQIVDAGGCYVSPGWIDLHVHVYQG--GTRYGD---RPDMIGVKSGVTTVVDAGSAGAD 75 (338)
T ss_pred CEEEECCEEEEccCCCCCCCCCeEEECCCCEEecCeEEeeecCCCC--CcccCC---CHhHHHHcCceeEEEeCCCCCCC
Confidence 5899999999999864433447899999999999999999999887 543333 35788999999999999754443
Q ss_pred cHHHHHHHHHHHh-c--cccceeceeccccC--CC---hhhHHHHHHHHH--HcCCCeEEEEEecCCCccCCHHHHHHHH
Q 014320 152 SLTAGFEAYEKKA-K--NSCMDYGFHMAITK--WD---EVVSDEMEVMVK--EKGINSFKFFMAYKGSFMINDELLIEGF 221 (427)
Q Consensus 152 ~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~--~~---~~~~~~~~~l~~--~~g~~~ik~~~~~~~~~~~~~~~l~~~~ 221 (427)
.....++...+.. . .+++++++++.... .. ....+.+.+..+ ..|+.++|.++..++........++..+
T Consensus 76 ~~~~~~~~~~~~~~~~v~a~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~e~~~gi~gik~~~~~~~~~~~~~~~l~~~~ 155 (338)
T cd01307 76 NIDGFRYTVIERSATRVYAFLNISRVGLVAQDELPDPDNIDEDAVVAAAREYPDVIVGLKARASKSVVGEWGIKPLELAK 155 (338)
T ss_pred CHHHHHHHHHHhhhceEEEEEeeeccccccccccCChhHCCHHHHHHHHHHCcCcEEEEEEEeecccccccCCcHHHHHH
Confidence 3333344443333 2 35666665543321 11 112233443332 3688899999876543333344588999
Q ss_pred HHHHHcCCcEEEecCCh
Q 014320 222 KRCKSLGALAMVHAENG 238 (427)
Q Consensus 222 ~~a~~~g~~v~~H~e~~ 238 (427)
+.+++.|+++.+|+++.
T Consensus 156 ~~a~~~~~pi~vH~~~~ 172 (338)
T cd01307 156 KIAKEADLPLMVHIGSP 172 (338)
T ss_pred HHHHHcCCCEEEEeCCC
Confidence 99999999999998653
No 86
>cd01300 YtcJ_like YtcJ_like metal dependent amidohydrolases. YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.
Probab=99.89 E-value=5.8e-23 Score=207.21 Aligned_cols=247 Identities=14% Similarity=0.085 Sum_probs=135.5
Q ss_pred HHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHH-----HHcCCCeEEEEEe
Q 014320 131 QAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMV-----KEKGINSFKFFMA 205 (427)
Q Consensus 131 ~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~g~~~ik~~~~ 205 (427)
.+.+++.|||++.|+..... ...+.++...+.+. ..+.+..................... ++..+.++|+|++
T Consensus 189 ~~~~~~~GiT~v~d~~~~~~-~~~~~~~~l~~~~~-l~~rv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vKl~~D 266 (479)
T cd01300 189 ARELASLGVTTVHDAGGGAA-DDIEAYRRLAAAGE-LTLRVRVALYVSPLAEDLLEELGARKNGAGDDRLRLGGVKLFAD 266 (479)
T ss_pred HHHHHhCCCcEEEcCCCChh-hHHHHHHHHHHCCC-CeEEEEEEeccccchhhhhhHHhhhccCCCCCcEEEeeEEEEEc
Confidence 45668899999999754221 11344444444332 12222111111111110111111000 0123567888887
Q ss_pred cC-------------------CCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHH
Q 014320 206 YK-------------------GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPL 266 (427)
Q Consensus 206 ~~-------------------~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~ 266 (427)
.. +.+.++++++.++++.|++.|+++++|+.++..+....+.++
T Consensus 267 G~~~~~ta~l~~pY~~~~~~~g~~~~~~e~l~~~~~~a~~~g~~v~~Ha~gd~~i~~~l~~~~----------------- 329 (479)
T cd01300 267 GSLGSRTAALSEPYLDSPGTGGLLLISPEELEELVRAADEAGLQVAIHAIGDRAVDTVLDALE----------------- 329 (479)
T ss_pred CCCCcccccccCCcCCCCCCCCCccCCHHHHHHHHHHHHHCCCCEEEEEecHHHHHHHHHHHH-----------------
Confidence 31 224568999999999999999999999988766654433222
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCc
Q 014320 267 LEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRAS 346 (427)
Q Consensus 267 ~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~ 346 (427)
+........+.+..+.|++..+. +.++++++.|+.+ .+||+++++.........+. ..+.+..+|+
T Consensus 330 -------~~~~~~g~~~~r~~i~H~~~~~~-~~~~~l~~~gv~~--~~~P~~~~~~~~~~~~~~lg-~~~~~~~~p~--- 395 (479)
T cd01300 330 -------AALKDNPRADHRHRIEHAQLVSP-DDIPRFAKLGVIA--SVQPNHLYSDGDAAEDRRLG-EERAKRSYPF--- 395 (479)
T ss_pred -------HHHHhcCCCCCCceeeecccCCH-HHHHHHHHcCCce--EeCcccccCchHHHHHhccc-HHHHhcCchH---
Confidence 11111112356788999988764 7889999999655 46898776544322100000 0123334554
Q ss_pred ccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 347 GHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 347 ~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+.+++.|+.+++|||+.+ .+.. +|.....++.........+ ...+.++|+.++++++|.|||+.
T Consensus 396 ------~~~~~~Gv~v~lGSD~~~-~~~~------p~~~~~~av~~~~~~~~~~---~~~~~~ls~~~al~~~T~~~A~~ 459 (479)
T cd01300 396 ------RSLLDAGVPVALGSDAPV-APPD------PLLGIWAAVTRKTPGGGVL---GNPEERLSLEEALRAYTIGAAYA 459 (479)
T ss_pred ------HHHHHCCCeeeccCCCCC-CCCC------HHHHHHHHheeeCCCCCCC---CCccccCCHHHHHHHHHHHHHHH
Confidence 558999999999999843 2211 1111111111000000000 01245799999999999999974
No 87
>COG1228 HutI Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.89 E-value=1e-22 Score=197.52 Aligned_cols=293 Identities=20% Similarity=0.159 Sum_probs=163.7
Q ss_pred ccEEEECcEEEcC-CCceeeeEEEeCCeEEEeeCC-CCCCCCceEEeCCCCEEeccccccccccccCcCCCC------Ch
Q 014320 53 SKILIKGGTVVNA-HHQQIADVYVEDGIVVAVQPN-INVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSE------TI 124 (427)
Q Consensus 53 ~~~~i~~~~i~~~-~~~~~~~i~i~~g~I~~vg~~-~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~------~~ 124 (427)
..+.+.+++.++. ...+++.|+|+||||++||+. ...+++.++||++|++|+|||||+|+|+...-.+.. ..
T Consensus 10 ~~~~~~~~~~~~~~~~i~~~~v~i~~GkI~~vg~~~~~~~~~~~viD~~G~~V~PGLID~HtHl~~~~~~~~~~~~~~~~ 89 (406)
T COG1228 10 AMLATLAGRGLPGLGIIEDGAVLIEDGKIVAVGPEEIDIPAGAEVIDAKGKTVTPGLIDAHTHLGFGGSRGGEFELREAG 89 (406)
T ss_pred hhheeeccccCCCcceeecceEEEECCEEEEecCcccCCCCCCeEEeCCCCEEccceeeccccccccCCccchhhhcccC
Confidence 3467788888774 335679999999999999987 455667899999999999999999999987411000 00
Q ss_pred hh-----------------------------HHHHHHHHHcCCceEEecCcCCCCC--cHHHHHHHHHHHhccccceece
Q 014320 125 DD-----------------------------FFSGQAAALAGGTTMHIDFVIPING--SLTAGFEAYEKKAKNSCMDYGF 173 (427)
Q Consensus 125 e~-----------------------------~~~~~~~~l~~GvTtv~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 173 (427)
.. .......+++.|+|+.-........ .....++..........+.+..
T Consensus 90 ~~~~~i~~~~~gi~~~~~~~~~a~~~g~~~~~~~~l~~~~~~g~~~~e~~~~~g~~~~~e~~~~~~~~~~~~~~~~~~~~ 169 (406)
T COG1228 90 ASYTEILAAGGGILPLDRGFTTARDGGLKATALPRLKRAGSAGVTTGERKSGYGLDLETEGGHLRAAAGLKESRPVAVGS 169 (406)
T ss_pred ccHHHHHHhcCChhhhHHHHHHHhhcchHHHHHHHHHHHHHcCCcccceeeeecccccccccccchhhhccccccccccC
Confidence 00 0011223456676665543222111 0111111111111101111110
Q ss_pred -----eccc--cCCC-hhhHHHHHHHHHHcCCCeEEEEEe-cCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHH
Q 014320 174 -----HMAI--TKWD-EVVSDEMEVMVKEKGINSFKFFMA-YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEG 244 (427)
Q Consensus 174 -----~~~~--~~~~-~~~~~~~~~l~~~~g~~~ik~~~~-~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~ 244 (427)
+... ...+ +...+.+..+++..--.++.-+.+ ......+++++++++++.|++.|+++.+|++..+.+.
T Consensus 170 t~~~~~~~~~~~~~~r~~~~~g~~~~i~~~a~~~l~~~~d~~~~~~~fs~~e~~~~l~~a~~~g~~v~~HA~~~~g~~-- 247 (406)
T COG1228 170 TPLAAHGVPEERKATREAYVAGARLLIKIVATGGLASFVDAFCEGGQFSPEEIRAVLAAALKAGIPVKAHAHGADGIK-- 247 (406)
T ss_pred ccccccCCcccccchHHHHHHHHHHHHHHHHhccccchhhccccccccCHHHHHHHHHHHHHCCCceEEEecccchHH--
Confidence 1110 0111 112222222121111111211222 2234567999999999999999999999997765332
Q ss_pred HHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhh--cCCCEEEecCccceeeC
Q 014320 245 QKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARK--AGQRVIGEPVVSGLVLD 322 (427)
Q Consensus 245 ~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~--~G~~v~~~~~p~~l~~~ 322 (427)
.+.+.+. ..+.|....+. +.++.+++ .|.++ +...|...+..
T Consensus 248 ---------------------------------~A~~~g~-~s~~H~~~ld~-~~~~~~a~~~~g~~~-~~l~p~~~~~l 291 (406)
T COG1228 248 ---------------------------------LAIRLGA-KSAEHGTLLDH-ETAALLAEKGAGTPV-PVLLPRTKFEL 291 (406)
T ss_pred ---------------------------------HHHHhCc-ceehhhhhcCH-hHHHHHhhccCCCcc-ccccchhhhhh
Confidence 1112222 23677766553 66777888 66542 33333221111
Q ss_pred cccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHH
Q 014320 323 DSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWD 402 (427)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~ 402 (427)
. +.++...+.+++.|+.++++||+.|.+... .+.+.+.
T Consensus 292 ~----------------------e~~~~~~~~l~~~GV~vai~TD~~~~~~~~--------------------~l~~~m~ 329 (406)
T COG1228 292 R----------------------ELDYKPARKLIDAGVKVAIGTDHNPGTSHG--------------------SLALEMA 329 (406)
T ss_pred h----------------------cccchhHHHHHHCCCEEEEEcCCCCCchhh--------------------HHHHHHH
Confidence 1 112233667999999999999997765311 1222232
Q ss_pred HHHhcCCCCHHHHHHHHchhhhcC
Q 014320 403 TMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 403 ~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
.++..+ ||++|+++.+|.|||++
T Consensus 330 l~~~~g-mtp~EaL~a~T~naA~a 352 (406)
T COG1228 330 LAVRLG-MTPEEALKAATINAAKA 352 (406)
T ss_pred HHHHcC-CCHHHHHHHHHHHHHHH
Confidence 345566 99999999999999985
No 88
>PRK10027 cryptic adenine deaminase; Provisional
Probab=99.89 E-value=2.9e-21 Score=194.83 Aligned_cols=178 Identities=17% Similarity=0.160 Sum_probs=130.2
Q ss_pred CccEEEECcEEEcCCC--ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHH
Q 014320 52 SSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFS 129 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~--~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~ 129 (427)
+.+++|+|++|+++.. ...++|+|+||||++|++......+.++||++|++|+|||||+|+|+..+ . .+++++
T Consensus 29 ~~dllI~ng~vv~~~~~~~~~~~V~I~~GrI~~Vg~~~~~~~~~~vIDa~G~~v~PGlIDaHvHiess--~-~~p~~~-- 103 (588)
T PRK10027 29 VADYIIDNVSILDLINGGEISGPIVIKGRYIAGVGAEYADAPALQRIDARGATAVPGFIDAHLHIESS--M-MTPVTF-- 103 (588)
T ss_pred CCCEEEECcEEEeCCCCcEEeeEEEEECCEEEEeCCCCCCCCCCeEEECCCCEEEECeEeccccCCcc--c-CCHhHH--
Confidence 5678999999998643 45678999999999997643222346899999999999999999999886 2 367777
Q ss_pred HHHHHHcCCceEEecCcCCCC-CcHHHHHHHHHHHhccccceeceecc----ccC-CC----hhhHHHHHHHHHHcCCCe
Q 014320 130 GQAAALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAKNSCMDYGFHMA----ITK-WD----EVVSDEMEVMVKEKGINS 199 (427)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~----~~~~~~~~~l~~~~g~~~ 199 (427)
.+.++.+||||++++..... ....+.++...+.+.+..+++++..+ ... .. .-..+++++++++.++.+
T Consensus 104 -a~aal~~G~TtVv~dPhei~nv~g~~gi~~~l~~a~~~p~~~~~~~ps~vpa~~~~Et~Ga~~~~~~~~~~l~~~~v~g 182 (588)
T PRK10027 104 -ETATLPRGLTTVICDPHEIVNVMGEAGFAWFARCAEQARQNQYLQVSSCVPALEGCDVNGASFTLEQMLAWRDHPQVTG 182 (588)
T ss_pred -HHHHHhCceEEEEcCCCCcccCCCHHHHHHHHHHhhhCCCeeEEeecccCcCCcccccCCCcCCHHHHHHHhcCCCcee
Confidence 44689999999998754322 24456666666666555555433221 111 11 123567888886778889
Q ss_pred EEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCCh
Q 014320 200 FKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (427)
Q Consensus 200 ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~ 238 (427)
+..+|++.+....+++.+.++... .++++..|+-.-
T Consensus 183 lgEvMn~~~V~~~d~~~~~ki~~~---~~~~idGH~p~l 218 (588)
T PRK10027 183 LAEMMDYPGVISGQNALLDKLDAF---RHLTLDGHCPGL 218 (588)
T ss_pred EEeccCccccccCCHHHHHHHHHh---CCCceECCCCCC
Confidence 999999998887888888888744 799999997543
No 89
>cd01299 Met_dep_hydrolase_A Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.89 E-value=6.2e-22 Score=191.36 Aligned_cols=264 Identities=19% Similarity=0.114 Sum_probs=156.4
Q ss_pred eEEeCCCCEEeccccccccccccCcCCCCC----hhhH-----HHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHh
Q 014320 94 KVLDATGKFVMPGGIDPHTHLAMEFMGSET----IDDF-----FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKA 164 (427)
Q Consensus 94 ~viD~~g~~v~PG~ID~H~H~~~~~~g~~~----~e~~-----~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~ 164 (427)
++||++|++|||||||+|+|+......... .+.+ ....+.++++||||++|++........+.++.....+
T Consensus 2 ~vID~~g~~v~PGliD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~g~~~~~~~~~~~~~g~~~g 81 (342)
T cd01299 2 QVIDLGGKTLMPGLIDAHTHLGSDPGDLPLDLALPVEYRTIRATRQARAALRAGFTTVRDAGGADYGLLRDAIDAGLIPG 81 (342)
T ss_pred cEEeCCCCEECCCeeeeeeeccccCCCccccccCCHHHHHHHHHHHHHHHHhCCCcEEEeCCCcchHHHHHHHHcCCccC
Confidence 689999999999999999998664111110 1111 2457788999999999987542211122222222222
Q ss_pred cccc------------ceece---------eccccCCChhhHHHHHHHHHHcCCCeEEEEEecCC--------CccCCHH
Q 014320 165 KNSC------------MDYGF---------HMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKG--------SFMINDE 215 (427)
Q Consensus 165 ~~~~------------~~~~~---------~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~--------~~~~~~~ 215 (427)
++.. .++.. +.......++..+.++++. +.|++.+|+|+++.. ...++++
T Consensus 82 Pr~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~G~~~iK~~~~g~~~~~~~~~~~~~~~~e 160 (342)
T cd01299 82 PRVFASGRALSQTGGHGDPRGLSGLFPAGGLAAVVDGVEEVRAAVREQL-RRGADQIKIMATGGVLSPGDPPPDTQFSEE 160 (342)
T ss_pred CceeecchhhcccCCCCccccccccccccCCcceecCHHHHHHHHHHHH-HhCCCEEEEeccCCcCCCCCCCcccCcCHH
Confidence 2210 11100 0111223455667777777 689999999997521 1357899
Q ss_pred HHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHH
Q 014320 216 LLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD 295 (427)
Q Consensus 216 ~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~ 295 (427)
.++++++.|++.|+++.+|+.+...+... . +.|.. .+.|+...+
T Consensus 161 ~l~~~~~~A~~~g~~v~~H~~~~~~i~~~----l-------------------------------~~G~~-~i~H~~~~~ 204 (342)
T cd01299 161 ELRAIVDEAHKAGLYVAAHAYGAEAIRRA----I-------------------------------RAGVD-TIEHGFLID 204 (342)
T ss_pred HHHHHHHHHHHcCCEEEEEeCCHHHHHHH----H-------------------------------HcCCC-EEeecCCCC
Confidence 99999999999999999999775443221 1 12332 488887665
Q ss_pred HHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCC-------CcccHHHHHHHHhcCCceEEecCC
Q 014320 296 AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIR-------ASGHNKALQAALATGILQLVGTDH 368 (427)
Q Consensus 296 ~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr-------~~~~~~~l~~~l~~G~~~~lgSD~ 368 (427)
. +.++++++.|+.+++ ||.............. .++.. .......++++.+.|+.+++|||.
T Consensus 205 ~-~~~~~l~~~g~~~~~--t~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~GTD~ 272 (342)
T cd01299 205 D-ETIELMKEKGIFLVP--TLATYEALAAEGAAPG---------LPADSAEKVALVLEAGRDALRRAHKAGVKIAFGTDA 272 (342)
T ss_pred H-HHHHHHHHCCcEEeC--cHHHHHHHHhhccccC---------CCHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCC
Confidence 4 778899999977664 5543211000000000 01000 011235577889999999999996
Q ss_pred CCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 369 CAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 369 ~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
...... +.. . . .-+..+ .+.++++.++++++|.|||++
T Consensus 273 ~~~~~~--------------~~~-~--~--~e~~~~-~~~~~~~~~al~~~T~~~a~~ 310 (342)
T cd01299 273 GFPVPP--------------HGW-N--A--RELELL-VKAGGTPAEALRAATANAAEL 310 (342)
T ss_pred CCCCCc--------------hhH-H--H--HHHHHH-HHhCCCHHHHHHHHHHHHHHH
Confidence 321100 000 0 0 011112 234689999999999999974
No 90
>COG1001 AdeC Adenine deaminase [Nucleotide transport and metabolism]
Probab=99.88 E-value=6.9e-21 Score=185.14 Aligned_cols=179 Identities=20% Similarity=0.283 Sum_probs=137.0
Q ss_pred CccEEEECcEEEcCCC--ceeeeEEEeCCeEEEe-eCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHH
Q 014320 52 SSKILIKGGTVVNAHH--QQIADVYVEDGIVVAV-QPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFF 128 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~--~~~~~i~i~~g~I~~v-g~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~ 128 (427)
..|++++|+++++.-. +..++|+|.+|||++| ++.. .++.++||+.|++|.|||||.|+|+..+ ..++..|
T Consensus 23 ~adlv~~ng~ivdv~~gei~~~dIaI~~grI~~v~~~~~--~e~~~~iDa~g~yivPGfID~H~HIESS---m~tP~~F- 96 (584)
T COG1001 23 KADLVLKNGRIVDVVTGEIYKGDIAIAGGRIVGVIGEYR--AEATEVIDAAGRYIVPGFIDAHLHIESS---MLTPSEF- 96 (584)
T ss_pred CCCEEEECCEEEEeeeccEEeeeEEEECCEEEEeecCcC--cccceeecCCCCEeccceeecceecccc---ccCHHHH-
Confidence 6789999999999654 5689999999999995 4432 4568999999999999999999999875 5677777
Q ss_pred HHHHHHHcCCceEEe-cCcCCCCCcHHHHHHHHHHHhccccceeceeccccC--------CChhhHHHHHHHHHHcCCCe
Q 014320 129 SGQAAALAGGTTMHI-DFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITK--------WDEVVSDEMEVMVKEKGINS 199 (427)
Q Consensus 129 ~~~~~~l~~GvTtv~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~~g~~~ 199 (427)
+++.+..||||++ |.+...+....+.++.+.+.....++++.+..+... ..+-..+.+++++++..+.+
T Consensus 97 --A~~Vlp~GtTtvV~DPHEIaNV~G~~Gi~~ml~~a~~~pl~~~~~~pScVPat~~Et~Ga~l~a~~i~e~~~~p~Vig 174 (584)
T COG1001 97 --ARAVLPHGTTTVVSDPHEIANVLGEDGIRFMLDEAKETPLKVYVMLPSCVPATPFETSGAELTAEDIKELLEHPEVIG 174 (584)
T ss_pred --HHHhhccCceEEeeCcHHHHhhccHHHHHHHHHHHhhCCeEEEEecccCccCCccccCCceecHHHHHHHhhCCCccc
Confidence 7889999999988 444444445677788888777777777765543211 11123567888887778889
Q ss_pred EEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChh
Q 014320 200 FKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGD 239 (427)
Q Consensus 200 ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~ 239 (427)
+..+|++.+...-++ .+...++.+++.|+++..|+.+-+
T Consensus 175 l~E~Mn~pgVi~~D~-~~l~kl~a~~~~~k~VdGHapgl~ 213 (584)
T COG1001 175 LGEMMNFPGVIEGDP-DMLAKLEAARKAGKPVDGHAPGLS 213 (584)
T ss_pred hhhhcCCchhccCCH-HHHHHHHHHHHcCCeecccCCCCC
Confidence 999999887766454 555666789999999999986544
No 91
>PLN02303 urease
Probab=99.87 E-value=1.1e-20 Score=191.70 Aligned_cols=193 Identities=16% Similarity=0.230 Sum_probs=132.9
Q ss_pred CccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCC--C----------CCceEEeCCCCEEeccccccccccccCcC
Q 014320 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV--G----------DDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~--~----------~~~~viD~~g~~v~PG~ID~H~H~~~~~~ 119 (427)
..|++|+|++|++..+...++|.|+||||++||+.... + +++++||++|++|+|||||+|+|+..+
T Consensus 333 ~~DlVItNa~IID~~Gi~kaDI~IkDGrIvaIGkagnp~i~~gv~~~~~~g~~teVIDAeGlIVtPG~ID~HVHf~~P-- 410 (837)
T PLN02303 333 SLDTVITNAVIIDYTGIYKADIGIKDGLIVGIGKAGNPDVMDGVTSNMIVGVNTEVIAGEGMIVTAGGIDCHVHFICP-- 410 (837)
T ss_pred cCCEEEeCeEEECCCCcEEeEEEEECCEEEEecCCCCcccccccccccccCCCCeEEECCCCEEEeCEEEeecCCCCC--
Confidence 45799999999996667788999999999999974211 1 246899999999999999999999766
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHcCCCe
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINS 199 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 199 (427)
+. ..+.+..+...++.+|+|++-+............++.+.+......+++++++.. .....+++.++. +.|+.+
T Consensus 411 g~-~~eaLasGVTTai~GGtgp~pnT~ptt~t~g~e~I~~~L~aa~~~pvn~Gf~gkG---~~s~l~eL~eli-eaGa~G 485 (837)
T PLN02303 411 QL-ATEAIASGITTLVGGGTGPAHGTCATTCTPAPSHMKLMLQSTDDLPLNFGFTGKG---NTAKPEGLHEII-KAGAMG 485 (837)
T ss_pred cH-HHHHHHHhHHHHHhcCCCCCCcccCcCCCCCHHHHHHHHHhcccCCCcEEEEccC---cccCHHHHHHHH-HcCcEE
Confidence 32 2344444444444444444210000000023556666666666667888876532 223356677776 679999
Q ss_pred EEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhh---HHHHH--------HHHHHcCCCC
Q 014320 200 FKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDA---VFEGQ--------KRMIELGITG 255 (427)
Q Consensus 200 ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~---~~~~~--------~~l~~~G~~~ 255 (427)
||.+.. +..+++.+.++++.|+++|+++++|+|+..+ ++..+ .++++.|+.+
T Consensus 486 fK~h~d----~gvTpelL~raLe~AkelGVpVaIHAEdLnE~G~vE~t~~a~G~RpIh~~h~~Ga~g 548 (837)
T PLN02303 486 LKLHED----WGTTPAAIDNCLDVAEEYDIQVTIHTDTLNESGCVEHSIAAFKGRTIHTYHSEGAGG 548 (837)
T ss_pred EEECCC----CCCCHHHHHHHHHHHHHcCCEEEEecCcccccchHHHHHHHHCCChHHHHHhcCCCC
Confidence 987643 3468999999999999999999999988544 43333 3567777765
No 92
>PRK06846 putative deaminase; Validated
Probab=99.86 E-value=1.6e-19 Score=178.21 Aligned_cols=241 Identities=15% Similarity=0.138 Sum_probs=141.2
Q ss_pred eeeeEEEeCCeEEEeeCCCCC-CCCceEEeCCCCEEeccccccccccccCcCCCCC--------------------h---
Q 014320 69 QIADVYVEDGIVVAVQPNINV-GDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSET--------------------I--- 124 (427)
Q Consensus 69 ~~~~i~i~~g~I~~vg~~~~~-~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~--------------------~--- 124 (427)
...+|.|+||+|++|++.... +.+.++||++|++|+|||||+|+|+.++...... +
T Consensus 30 ~~~~i~i~~g~I~~i~~~~~~~~~~~~~id~~g~~v~Pg~iD~H~H~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~ 109 (410)
T PRK06846 30 ALCTLEIQDGKIVAIRPNKQVPDATLPTYDANGLLMLPAFREMHIHLDKTYYGGPWKACRPAKTIQDRIELEQKELPELL 109 (410)
T ss_pred eeEEEEEECCEEEEeecCCCCCCCCCceEeCCCCEEecCEEeeeecccchhhccchhhcCCcccHHHHHhhhhhhHHHhH
Confidence 467999999999999986322 2346799999999999999999999875211110 0
Q ss_pred hhHH----HHHHHHHcCCceEEecCcCCCCC----cHHHHHHHHHHHhccccceeceec-cccC-CChhhHHHHHHHHHH
Q 014320 125 DDFF----SGQAAALAGGTTMHIDFVIPING----SLTAGFEAYEKKAKNSCMDYGFHM-AITK-WDEVVSDEMEVMVKE 194 (427)
Q Consensus 125 e~~~----~~~~~~l~~GvTtv~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~l~~~ 194 (427)
+... ......+..|+|+++++...... .....++...+.. ..+...... .... ......+.+++.. +
T Consensus 110 ~~~~~~a~~~l~~~~~~Gtt~~r~~v~~~~~~~~~~~~a~~e~l~e~~--~~v~~~~~a~~~~g~~~~~~~~lL~~al-~ 186 (410)
T PRK06846 110 PTTQERAEKLIELLQSKGATHIRSHCNIDPVIGLKNLENLQAALERYK--DGFTYEIVAFPQHGLLRSNSEPLMREAM-K 186 (410)
T ss_pred HHHHHHHHHHHHHHHhCCccEEEEEEeeCcccccchHHHHHHHHHHhh--CcceEEEEeccCcccCCccHHHHHHHHH-H
Confidence 0011 12334567899998887542222 1111122222211 222222110 0000 0122234466666 6
Q ss_pred cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHH
Q 014320 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATT 273 (427)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~ 273 (427)
.|+..++. +.+......+++.++++++.|+++|+++++|. +....... .++
T Consensus 187 ~Ga~~i~g-l~p~~~~~~~~~~l~~~~~lA~~~g~~v~~Hv~e~~~~~~~---------------------------~~~ 238 (410)
T PRK06846 187 MGAHLVGG-VDPASVDGAIEKSLDTMFQIAVDFNKGVDIHLHDTGPLGVA---------------------------TIK 238 (410)
T ss_pred cCCCEEeC-CCCccCCcCHHHHHHHHHHHHHHhCCCcEEEECCCCChhHH---------------------------HHH
Confidence 78876653 23444445678999999999999999999996 43322111 111
Q ss_pred HHHHHHHhcCC--CEEEEcCCCH-----HH-HHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCC
Q 014320 274 RAIRLAEFVNT--PLYVVHVMSM-----DA-MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRA 345 (427)
Q Consensus 274 ~~~~~~~~~g~--~~~i~H~~~~-----~~-~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~ 345 (427)
+.++...+.|. ++.+.|+... +. .+.++.+++.|+.|++. +| . +.. .+|
T Consensus 239 ~~~~~~~~~gl~~~v~~~H~~~l~~~~~~e~~~li~~la~~g~~v~~~-~~---------~-------~~g---~~p--- 295 (410)
T PRK06846 239 YLVETTEEAQWKGKVTISHAFALGDLNEEEVEELAERLAAQGISITST-VP---------I-------GRL---HMP--- 295 (410)
T ss_pred HHHHHHHHhCCCCCEEEEecchhhcCCHHHHHHHHHHHHHcCCeEEEe-CC---------C-------CCC---CCC---
Confidence 22233223322 7889998642 22 23366789999887742 22 0 011 244
Q ss_pred cccHHHHHHHHhcCCceEEecCCC
Q 014320 346 SGHNKALQAALATGILQLVGTDHC 369 (427)
Q Consensus 346 ~~~~~~l~~~l~~G~~~~lgSD~~ 369 (427)
++++++.|+.+++|||+.
T Consensus 296 ------~~~l~~~Gv~v~lGtD~~ 313 (410)
T PRK06846 296 ------IPLLHDKGVKVSLGTDSV 313 (410)
T ss_pred ------HHHHHhCCCeEEEecCCC
Confidence 456888999999999963
No 93
>cd00854 NagA N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.
Probab=99.86 E-value=4.1e-20 Score=179.98 Aligned_cols=173 Identities=20% Similarity=0.271 Sum_probs=118.4
Q ss_pred EEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCc-CCCCChhhHHHHHHHH
Q 014320 56 LIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEF-MGSETIDDFFSGQAAA 134 (427)
Q Consensus 56 ~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~-~g~~~~e~~~~~~~~~ 134 (427)
+|+|++|+++....+.+|.|+||||++|++....+.+.++||++|++|+|||||+|+|..... ....+++++...++.+
T Consensus 2 ~i~~~~v~~~~~~~~~~i~i~~g~I~~i~~~~~~~~~~~vid~~g~~l~PG~iD~H~H~~~g~~~~~~~~e~~~~~~~~~ 81 (374)
T cd00854 2 IIKNARILTPGGLEDGAVLVEDGKIVAIGPEDELEEADEIIDLKGQYLVPGFIDIHIHGGGGADFMDGTAEALKTIAEAL 81 (374)
T ss_pred EEEeEEEeCCCEEcccEEEEECCEEEEecCCCCcccCCcEEECCCCEecccEEEeeecccCCCCCCCCCHHHHHHHHHHH
Confidence 789999999844567899999999999987544333468999999999999999999986531 1123468888889999
Q ss_pred HcCCceEEecCcCCCCC-cHHHHHHHHHHHhcc--ccceeceec--cccC------CCh-----hhHHHHHHHHHHcCCC
Q 014320 135 LAGGTTMHIDFVIPING-SLTAGFEAYEKKAKN--SCMDYGFHM--AITK------WDE-----VVSDEMEVMVKEKGIN 198 (427)
Q Consensus 135 l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~------~~~-----~~~~~~~~l~~~~g~~ 198 (427)
+++|||+++++...... ...+.++.+++.... ....++++. +... .+. ...+++++++ ..+.+
T Consensus 82 ~~~GvTtv~~t~~t~~~~~~~~~l~~~~~~~~~~~g~~~~g~hleGP~~~~~~~g~h~~~~~~~~~~~~~~~~~-~~~~~ 160 (374)
T cd00854 82 AKHGTTSFLPTTVTAPPEEIAKALAAIAEAIAEGQGAEILGIHLEGPFISPEKKGAHPPEYLRAPDPEELKKWL-EAAGG 160 (374)
T ss_pred HccCcceeeccccCCCHHHHHHHHHHHHHHhhcCCCCeeEEEeeecCccCcccCCCCCHHHcCCcCHHHHHHHH-HhcCC
Confidence 99999999998644332 344444554443221 122233322 1110 011 1235667766 45557
Q ss_pred eEEEEEecCCCccCCHHHH--HHHHHHHHHcCCcEE-EecC
Q 014320 199 SFKFFMAYKGSFMINDELL--IEGFKRCKSLGALAM-VHAE 236 (427)
Q Consensus 199 ~ik~~~~~~~~~~~~~~~l--~~~~~~a~~~g~~v~-~H~e 236 (427)
.+|++. +.+|.. .++++.++++|+++. .|..
T Consensus 161 ~ik~~t-------laPE~~~~~~~i~~~~~~gi~v~~GH~~ 194 (374)
T cd00854 161 LIKLVT-------LAPELDGALELIRYLVERGIIVSIGHSD 194 (374)
T ss_pred CEEEEE-------ECCCCCChHHHHHHHHHCCeEEEeeCCc
Confidence 888863 455555 789999999999995 8964
No 94
>TIGR00221 nagA N-acetylglucosamine-6-phosphate deacetylase.
Probab=99.85 E-value=1.6e-19 Score=174.61 Aligned_cols=127 Identities=17% Similarity=0.255 Sum_probs=93.0
Q ss_pred CccEEEECcEEEcCCCc-eeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCc-CCCCChhhHHH
Q 014320 52 SSKILIKGGTVVNAHHQ-QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEF-MGSETIDDFFS 129 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~~-~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~-~g~~~~e~~~~ 129 (427)
..+++|+|++|++++.. .+++|.|+||||++|++..+.+++.++||++|++|+|||||+|+|..... ....+.+++..
T Consensus 2 ~~~~~i~n~~i~~~~~~~~~~~i~V~dGkI~~I~~~~~~~~~~~viD~~G~~i~PGfID~HvHg~~g~~~~~~~~e~~~~ 81 (380)
T TIGR00221 2 AESYLLKDIAIVTGNEVIDNGAVGINDGKISTVSTEAELEPEIKEIDLPGNVLTPGFIDIHIHGCGGVDTNDASFETLEI 81 (380)
T ss_pred CceEEEEeeEEECCCCEEeccEEEEECCEEEEEcccccCCCCCeEEECCCCEEccceeeeeeccccCcCCCCCCHHHHHH
Confidence 34689999999998764 46899999999999987543334558999999999999999999985431 11235688989
Q ss_pred HHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHh--ccccceeceecccc
Q 014320 130 GQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKA--KNSCMDYGFHMAIT 178 (427)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 178 (427)
.++.++++|||+++++..+.+. ...+.++.+.+.. .+....+++|...+
T Consensus 82 ~~~~~~~~GvTt~l~t~~t~~~~~~~~~l~~~~~~~~~~~~a~~lG~HlEGP 133 (380)
T TIGR00221 82 MSERLPKSGCTSFLPTLITQPDENIKQAVKNMREYLAKEKNAQALGLHLEGP 133 (380)
T ss_pred HHHHHHhcCeeEEeeeccCCCHHHHHHHHHHHHHHHhccCCceeeeEeeecC
Confidence 9999999999999998654432 4455555555432 12445667665433
No 95
>TIGR01792 urease_alph urease, alpha subunit. This model describes the urease alpha subunit UreC (designated beta or B chain, UreB in Helicobacter species). Accessory proteins for incorporation of the nickel cofactor are usually found in addition to the urease alpha, beta, and gamma subunits. The trusted cutoff is set above the scores of many reported fragments and of a putative second urease alpha chain in Streptomyces coelicolor.
Probab=99.85 E-value=1.3e-19 Score=179.76 Aligned_cols=170 Identities=18% Similarity=0.194 Sum_probs=123.0
Q ss_pred CccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCC----------CCCceEEeCCCCEEeccccccccccccCcCCC
Q 014320 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV----------GDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS 121 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~----------~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~ 121 (427)
.+|++|+|++|++..+...++|.|+||||++|++.... ..++++||++|++|+|||||+|+|+..+ +
T Consensus 65 ~MDlVIkNg~VID~~gi~kaDI~IkDGrIaaIG~~~~p~~~~~v~~~~~~~tEVIDa~GkIV~PGlIDtHvH~~~P--~- 141 (567)
T TIGR01792 65 VLDLVITNALILDWTGIYKADIGIKNGRIVGIGKAGNPDTMDGVDMIVGASTEAISGEGKIVTAGGIDTHVHYISP--Q- 141 (567)
T ss_pred cCcEEEECeEEECCCCeEEEEEEEECCEEEEEcCCCcccccccccccCCCCCeEEECCCCEEEECeEEeecCCCCc--c-
Confidence 45799999999997666789999999999999975321 1346899999999999999999998654 1
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcCCC-----CC---cHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHH
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVIPI-----NG---SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVK 193 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 193 (427)
..++++.+||||+++.+..+ .. ...-......+......++++++... .....+.+.+++
T Consensus 142 --------~~~aAl~gGVTTmI~~Gtgp~~~t~pTt~t~~~~~~~~~l~aa~~~~in~g~~g~g---~~~~~~~L~e~i- 209 (567)
T TIGR01792 142 --------QVQAALDNGITTLIGGGTGPADGTNATTCTPGPWYLHRMLQAADGLPINFGFTGKG---SGSGPAALIEQI- 209 (567)
T ss_pred --------HHHHHHhCceEEEecCCCccccCCCCcccccchhhHHHHHHHhccCCccEEEEeCC---ccchHHHHHHHH-
Confidence 16788999999999964311 01 11111222223334455666665321 122345566666
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhh
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDA 240 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~ 240 (427)
+.|+.++|.+.. +.++++.+.++++.|+++|+++++|+|+..+
T Consensus 210 ~aGa~gfK~h~~----y~~s~e~L~~al~~A~e~gv~V~iH~ET~~E 252 (567)
T TIGR01792 210 EAGACGLKVHED----WGATPAAIDNALSVADEYDVQVAVHTDTLNE 252 (567)
T ss_pred HcCCcEEEeCCC----CCCCHHHHHHHHHHHHHcCCEEEEeCCCccc
Confidence 578888886543 4589999999999999999999999987766
No 96
>TIGR03583 EF_0837 probable amidohydrolase EF_0837/AHA_3915. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. These proteins resemble aminohydrolases (see pfam01979), including dihydroorotases. The function is unknown.
Probab=99.84 E-value=1e-18 Score=170.20 Aligned_cols=175 Identities=21% Similarity=0.218 Sum_probs=106.7
Q ss_pred cEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCC-CEEeccccccccccccCcCCCCChhhHHHHHH
Q 014320 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATG-KFVMPGGIDPHTHLAMEFMGSETIDDFFSGQA 132 (427)
Q Consensus 54 ~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g-~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~ 132 (427)
+++|+|++|+++. ..+|+|+||||++|++.... ++.++||++| ++|+|||||+|+|+..+ +....++. ..
T Consensus 2 ~~~i~n~~i~~~~---~~~v~i~~g~I~~v~~~~~~-~~~~~iD~~g~~~l~PG~ID~H~H~~~~--~~~~~~~~---~~ 72 (365)
T TIGR03583 2 DLLIKNGRTVNGT---PVDIAIEDGKIAAVGTTITG-SAKQTIDLEGETYVSAGWIDDHTHCFPK--SALYYDEP---DE 72 (365)
T ss_pred cEEEECcEEecCC---eeEEEEECCEEEEecCCCCC-CCCeEEECCCCeEEecCEEEeeeccCCC--cccccCCH---hH
Confidence 5899999999853 45899999999999874332 2458999999 99999999999999754 32333333 24
Q ss_pred HHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccc--cceeceecccc-----CCChhhHHHHHHHHHHc--CCCeEEEE
Q 014320 133 AALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNS--CMDYGFHMAIT-----KWDEVVSDEMEVMVKEK--GINSFKFF 203 (427)
Q Consensus 133 ~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~--g~~~ik~~ 203 (427)
.++.+|||+++++............+..++...+. .+++...+... ...+...++++++.+.. ++.++|.+
T Consensus 73 ~a~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~vv~~~~~ 152 (365)
T TIGR03583 73 IGVKTGVTTVVDAGSTGADDIDDFYRLAQQAKTNVFALLNISRIGLVAQDELADLSNLDASAVKQAVERYPDFIVGLKAR 152 (365)
T ss_pred hhhcCceeEEEeCCCCCCCCHHHHHHHHHhhCCcEEEEeeehhccccChhhhhChHHhHHHHHHHHHHhCcCcEEEEEEe
Confidence 46889999999976433333333333332222121 12222122110 11122344455554322 35677888
Q ss_pred EecCC--CccCCHHHHHHHHHHHHHcCCcEEEecCCh
Q 014320 204 MAYKG--SFMINDELLIEGFKRCKSLGALAMVHAENG 238 (427)
Q Consensus 204 ~~~~~--~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~ 238 (427)
+++.. ....++..+.+.+..+ +.++++.+|+.+.
T Consensus 153 ~t~~~i~E~gl~~~~~~~~l~~~-~~~~pv~vH~~~a 188 (365)
T TIGR03583 153 MSKSVVGDNGIEPLEIAKQIQQE-NLELPLMVHIGSA 188 (365)
T ss_pred ecccccccCCcCHHHHHHHHHHh-cCCCcEEEEeCCC
Confidence 87532 1223455555555544 6899999998654
No 97
>PRK11170 nagA N-acetylglucosamine-6-phosphate deacetylase; Provisional
Probab=99.84 E-value=1.3e-19 Score=175.56 Aligned_cols=123 Identities=18% Similarity=0.217 Sum_probs=88.6
Q ss_pred EEEECcEEEcCCCce-eeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCC-----CCChhhHH
Q 014320 55 ILIKGGTVVNAHHQQ-IADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG-----SETIDDFF 128 (427)
Q Consensus 55 ~~i~~~~i~~~~~~~-~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g-----~~~~e~~~ 128 (427)
++|+|++|++++... +++|+|+||||++|++....+.+.++||++|++|+|||||+|+|......- ..+.+.+.
T Consensus 2 ~~i~n~~i~~~~~~~~~~~v~IedgkI~~I~~~~~~~~~~~~ID~~G~~l~PG~ID~HvHG~~g~~~~~~~~~~~~~~l~ 81 (382)
T PRK11170 2 YALTNGRIYTGHEVLDDHAVVIADGLIEAVCPVAELPPGIEQRDLNGAILSPGFIDLQLNGCGGVQFNDTAEAISVETLE 81 (382)
T ss_pred EEEEeeEEECCCCeEeCCEEEEECCEEEEecCCccCCCCCeEEeCCCCEEccceeeeeecCccCcccccCccCCCHHHHH
Confidence 578999999988644 579999999999998754333345899999999999999999997543110 12567787
Q ss_pred HHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHh-ccccceeceeccc
Q 014320 129 SGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKA-KNSCMDYGFHMAI 177 (427)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~ 177 (427)
...+.++++|||+++++..+.+. ...+.++.+.+.. ......+++|...
T Consensus 82 ~~~~~~~~~GvTt~lpT~it~~~~~~~~~l~~~~~~~~~~~a~~~G~HlEG 132 (382)
T PRK11170 82 IMQKANEKSGCTSFLPTLITSSDELMKQAVRVMREYLAKHPNQALGLHLEG 132 (382)
T ss_pred HHHHHHHhcCEeEEeeeccCCCHHHHHHHHHHHHHHHhcCCCeEEEEEeec
Confidence 87888899999999987654332 3445555555432 2344566766543
No 98
>COG3454 Metal-dependent hydrolase involved in phosphonate metabolism [Inorganic ion transport and metabolism]
Probab=99.83 E-value=3.6e-19 Score=159.68 Aligned_cols=143 Identities=17% Similarity=0.221 Sum_probs=94.9
Q ss_pred EEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEecccccccccccc----CcCCCCC--hhhHHH
Q 014320 56 LIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAM----EFMGSET--IDDFFS 129 (427)
Q Consensus 56 ~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~----~~~g~~~--~e~~~~ 129 (427)
+|.|++|+..+...++.|+|+||+|..|...... ....+|++|.+++|||||.|+---+ |-.|... ...+..
T Consensus 2 ~lsnarivl~D~v~~gsv~i~DG~Ia~i~~g~s~--~~~~~d~eGd~LLPGlIeLHtD~lE~~~~PRPgV~wp~~aAi~a 79 (377)
T COG3454 2 ILSNARIVLEDRVVNGSVLIRDGLIADIDEGISP--LAAGIDGEGDYLLPGLIELHTDNLERFMTPRPGVRWPPIAAILA 79 (377)
T ss_pred ccccceEEeecceeeeeEEEecceEeeeccccCc--ccccccCCCCeecccchhhcchhhhcccCCCCCCCCCchHHHHH
Confidence 6789999999988889999999999999876432 2467899999999999999995322 1112222 223334
Q ss_pred HHHHHHcCCceEEecCcCCCCC--------cHHHHHHHHHHHh--ccccceeceeccccCCChhhHHHHHHHHHHcCCCe
Q 014320 130 GQAAALAGGTTMHIDFVIPING--------SLTAGFEAYEKKA--KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINS 199 (427)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~~~~~--------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 199 (427)
..+..+.+||||+.|....+.. ...+.++...+.. .+...+..+|........+.++.++++....++..
T Consensus 80 hD~~l~~sGITTv~dal~iGd~~~gg~r~~~~~~midaI~~~~~~g~lradHr~HlRcEvs~~~~l~~~e~~~~~p~v~L 159 (377)
T COG3454 80 HDAQLAASGITTVLDALAIGDVRDGGLRLENLRKMIDAIEEAQAAGRLRADHRLHLRCEVSHPATLPLFEDLMDHPRVKL 159 (377)
T ss_pred hhHHHHhcChhhHHhhhhcCcccCCccchHHHHHHHHHHHHHHhccchhhccceeeeeecCChhHHHHHHHHhcCCCeeE
Confidence 4556789999999986432211 3344444444432 23455666776665556677788888773333333
Q ss_pred E
Q 014320 200 F 200 (427)
Q Consensus 200 i 200 (427)
+
T Consensus 160 i 160 (377)
T COG3454 160 I 160 (377)
T ss_pred E
Confidence 3
No 99
>KOG3968 consensus Atrazine chlorohydrolase/guanine deaminase [Nucleotide transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.83 E-value=3.4e-19 Score=165.66 Aligned_cols=299 Identities=18% Similarity=0.141 Sum_probs=170.8
Q ss_pred eeeeEEEeC-CeEEEeeCCCCCC----------CCceEEeCCCCEEeccccccccccccCc-------------------
Q 014320 69 QIADVYVED-GIVVAVQPNINVG----------DDVKVLDATGKFVMPGGIDPHTHLAMEF------------------- 118 (427)
Q Consensus 69 ~~~~i~i~~-g~I~~vg~~~~~~----------~~~~viD~~g~~v~PG~ID~H~H~~~~~------------------- 118 (427)
++..+.|.| |||+.|++....+ +..++++..|+++||||||+|+|....+
T Consensus 26 e~~sl~Vd~~GKi~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~mPGfVdtH~H~a~q~~~s~~g~d~pll~wl~~~~ 105 (439)
T KOG3968|consen 26 EGSSLGVDDTGKIVFIGKAYFDENKLKGEGVEKENTKIKLSSGHFLMPGFVDTHIHPAHQFAMSGAGTDMPLLQWLGKYT 105 (439)
T ss_pred cCcceeecCCccEEEeeccccchhhhcccccccccceeeecCCcEEecceeecccchHhhhhhhccccCcHHHHHhhcce
Confidence 356668887 9999999753221 2457899999999999999999932110
Q ss_pred ---CCCCCh-hh----HHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceece-----eccc--cCCChh
Q 014320 119 ---MGSETI-DD----FFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGF-----HMAI--TKWDEV 183 (427)
Q Consensus 119 ---~g~~~~-e~----~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~ 183 (427)
.+.... |+ +....+.++++||||+..+...........++...+.++|..+.... +... ....++
T Consensus 106 f~le~~~~~~e~~~q~~~~vv~~mL~~GTTt~~~f~~~~~~s~~ll~~~~~~~G~R~~igkv~m~~~~~~~p~~~~~~E~ 185 (439)
T KOG3968|consen 106 FPLEATFTNEEDARQVYQRVVKEMLRAGTTTVEYFSTLHLDSELLLARAAIRAGQRALIGKVCMDCNAHAVPKGVETTEE 185 (439)
T ss_pred eecchhhhhHHHHHHHHHHHHHHHHHcCceehhhhhccCchhHHHHHHHHHHhCCceeeeeehhccCCCCCCccchhHHH
Confidence 011112 22 22345678999999998765332223445556666666664443211 1100 111233
Q ss_pred hHHHHHHHHH---HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHH-cCCCCccc
Q 014320 184 VSDEMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIE-LGITGPEG 258 (427)
Q Consensus 184 ~~~~~~~l~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~-~G~~~~~~ 258 (427)
.++..++++. +.+-......+.+.....|+.+.+....+.|+.++++++.|. |+.++++.+++..-+ .+.
T Consensus 186 si~~t~~~i~~~~~~~~~~~~~~vt~~fa~~c~k~v~~~l~~lak~~~l~~q~hIsen~~EI~~~~~ff~~~~~y----- 260 (439)
T KOG3968|consen 186 SIESTEDLIPKLEKLKREKVNPIVTPRFAASCSKGVFEELSKLAKYHNLHIQIHISENGKEIEAVKNFFPEKLSY----- 260 (439)
T ss_pred HHHHHHHHHHHHHhhccCCCCCcccccccCCCcchhHHHHHHHHHhhhhhhhhhhhhcHHHHHHHHHhhhhcccc-----
Confidence 3333333331 122222222223444566899999999999999999999996 888888877643211 000
Q ss_pred ccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeE
Q 014320 259 HALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYV 338 (427)
Q Consensus 259 ~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~ 338 (427)
.+.+.. ..+....-+-.|.+|++. +.++.++++|-.|.. ||..... .++.
T Consensus 261 ----------~~~yd~-~~lL~~ktvlaH~~hl~d----~ei~~l~k~g~svsh--CP~Sn~~-----------L~sG-- 310 (439)
T KOG3968|consen 261 ----------TDVYDK-GGLLTEKTVLAHLEHLSD----EEIELLAKRGCSVSH--CPTSNSI-----------LGSG-- 310 (439)
T ss_pred ----------hHHHHH-hcccchHhHhhhheecCc----hhHHHHHhcCCceEE--CCcchhh-----------hccC--
Confidence 011111 111111112245666644 446667778888887 6642211 1111
Q ss_pred EcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHH
Q 014320 339 MSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRL 418 (427)
Q Consensus 339 ~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~ 418 (427)
.|| ++++|+.|+++.+|||-++++...... ....+...+.......++++++++.+
T Consensus 311 -~~~---------vr~lL~~~v~VgLGtDv~~~s~l~a~r--------------~A~~~s~hL~~~~~~~~Ls~~e~L~l 366 (439)
T KOG3968|consen 311 -IPR---------VRELLDIGVIVGLGTDVSGCSILNALR--------------QAMPMSMHLACVLDVMKLSMEEALYL 366 (439)
T ss_pred -Ccc---------HHHHHhcCceEeecCCccccccHHHHH--------------HHHHHHHHHHhccCcccCCHHHHHHH
Confidence 244 466999999999999988754332211 01111112211112378999999999
Q ss_pred HchhhhcC
Q 014320 419 TSTEWGRL 426 (427)
Q Consensus 419 ~t~npA~~ 426 (427)
+|.|+|+.
T Consensus 367 ATi~GA~a 374 (439)
T KOG3968|consen 367 ATIGGAKA 374 (439)
T ss_pred Hhccchhh
Confidence 99999973
No 100
>COG1820 NagA N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=99.75 E-value=6.7e-17 Score=151.27 Aligned_cols=108 Identities=25% Similarity=0.361 Sum_probs=81.4
Q ss_pred EEEECcEEEcCCCc-eeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcC--CCCChhhHHHHH
Q 014320 55 ILIKGGTVVNAHHQ-QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM--GSETIDDFFSGQ 131 (427)
Q Consensus 55 ~~i~~~~i~~~~~~-~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~--g~~~~e~~~~~~ 131 (427)
..++|++|+++.+. .++.+.|+||+|.+|.+ .+.+.+.+++|.+|.+|+|||||.|+|...... ...+.+.+...+
T Consensus 2 ~~~~~~~i~t~~~~~~~~~v~i~dg~I~~i~~-~~~p~~~e~id~~G~~l~PGfID~hihG~gG~~~~D~~~~~~l~~i~ 80 (380)
T COG1820 2 YALKNGRIFTGHGVLDGGAVVIEDGKIEAVVP-AELPADAEIIDLKGALLVPGFIDLHIHGGGGADFMDAGSVETLETMA 80 (380)
T ss_pred ceeeccEEEcCcceEECcEEEEcCCEEEEEec-CcCCCcceeecCCCCEecccEEEEeecCcCcccccCccCHHHHHHHH
Confidence 37899999999985 56699999999999998 445677899999999999999999999876521 113456677888
Q ss_pred HHHHcCCceEEecCcCCCCC-cHHHHHHHHHHH
Q 014320 132 AAALAGGTTMHIDFVIPING-SLTAGFEAYEKK 163 (427)
Q Consensus 132 ~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~ 163 (427)
+..++.|||+++....+.+. ...+.++..++.
T Consensus 81 ~~~~~~GtTsfLpT~iT~~~e~i~~al~~~~e~ 113 (380)
T COG1820 81 EAHLRHGTTSFLPTLITASLEKIKAALRAIREA 113 (380)
T ss_pred HHhhhcCeeeeeeecccCCHHHHHHHHHHHHHH
Confidence 88999999999965433222 334444444443
No 101
>cd01295 AdeC Adenine deaminase (AdeC) directly deaminates adenine to form hypoxanthine. This reaction is part of one of the adenine salvage pathways, as well as the degradation pathway. It is important for adenine utilization as a purine, as well as a nitrogen source in bacteria and archea.
Probab=99.75 E-value=2.1e-16 Score=156.40 Aligned_cols=136 Identities=24% Similarity=0.332 Sum_probs=96.6
Q ss_pred eCCCCEEeccccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCC-CCCcHHHHHHHHHHHhccccceeceec
Q 014320 97 DATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIP-INGSLTAGFEAYEKKAKNSCMDYGFHM 175 (427)
Q Consensus 97 D~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (427)
|++|++|+|||||+|+|+..+ + .+++.+ ++.++.+||||++++... .+....+.++.+.+...+..+++.+..
T Consensus 1 Da~G~~v~PG~ID~H~Hi~~~--~-~~~~~~---~~~a~~~GvTtvv~~p~~~~~v~g~~~~~~~~~~a~~~p~~~~~~~ 74 (422)
T cd01295 1 DAEGKYIVPGFIDAHLHIESS--M-LTPSEF---AKAVLPHGTTTVIADPHEIANVAGVDGIEFMLEDAKKTPLDIFWML 74 (422)
T ss_pred CCCCCEEccCEEEccCCcCCC--C-CChHHH---HHHHHCCCcEEEEeCCCCCCcCCCHHHHHHHHHHHhCCCceEEEeC
Confidence 789999999999999999886 3 234443 778999999999987432 223455667766665555565554333
Q ss_pred cc----cCC----ChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChh
Q 014320 176 AI----TKW----DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGD 239 (427)
Q Consensus 176 ~~----~~~----~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~ 239 (427)
+. +.. .....++++++.++.++.+++.++++.+. ..+++.+.+.++.|++.|+++.+|+.+..
T Consensus 75 p~~vp~t~~e~~g~~~~~~~i~~l~~~~~vvglgE~md~~~v-~~~~~~l~~~i~~A~~~g~~v~~Ha~g~~ 145 (422)
T cd01295 75 PSCVPATPFETSGAELTAEDIKELLEHPEVVGLGEVMDFPGV-IEGDDEMLAKIQAAKKAGKPVDGHAPGLS 145 (422)
T ss_pred CCcCCCCCCCCCCCcCCHHHHHHHhcCCCCcEEEEeccCccc-cCCcHHHHHHHHHHHhCCCEEEEeCCCCC
Confidence 22 111 11136777877744689999999887643 34677899999999999999999986543
No 102
>cd01305 archeal_chlorohydrolases Predicted chlorohydrolases. These metallo-dependent hydrolases from archea are part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. They have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. Some members of this subgroup are predicted to be chlorohyrolases.
Probab=99.74 E-value=3.6e-17 Score=151.99 Aligned_cols=234 Identities=18% Similarity=0.225 Sum_probs=131.7
Q ss_pred EEeccccccccccccCcC-C-----------------------CCChhhHHHH----HHHHHcCCceEEecCcCCCCCcH
Q 014320 102 FVMPGGIDPHTHLAMEFM-G-----------------------SETIDDFFSG----QAAALAGGTTMHIDFVIPINGSL 153 (427)
Q Consensus 102 ~v~PG~ID~H~H~~~~~~-g-----------------------~~~~e~~~~~----~~~~l~~GvTtv~d~~~~~~~~~ 153 (427)
+|||||||+|+|+.+... | ..++++++.. ...++++||||+.|+........
T Consensus 1 ~v~PG~vn~H~H~~~~~~rg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~ 80 (263)
T cd01305 1 ILIPALVNAHTHLGDSAIKEVGDGLPLDDLVAPPDGLKHRLLAQADDRELAEAMRKVLRDMRETGIGAFADFREGGVEGI 80 (263)
T ss_pred CccccceeccccHHHHHhhcCCCCCcHHHHhcCcccchHHHHHhCCHHHHHHHHHHHHHHHHhcCCeEEEEccCcchhHH
Confidence 589999999999877521 1 0223333332 34569999999999743211123
Q ss_pred HHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEE
Q 014320 154 TAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMV 233 (427)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~ 233 (427)
....+..++.+.+. ..+.. ... .++. .+++. ...+. ++++++..++ ++++++.|+++|+++++
T Consensus 81 ~a~~~a~~~~g~r~---~~~~~-~~~-~~~~---~~~~~--~~~~~----~~~~~~~~~~---l~~~~~~A~~~g~~v~~ 143 (263)
T cd01305 81 ELLRRALGKLPVPF---EVILG-RPT-EPDD---PEILL--EVADG----LGLSSANDVD---LEDILELLRRRGKLFAI 143 (263)
T ss_pred HHHHHHHHhcCCCc---eEEec-cCC-cchH---HHHHH--hhccc----ccCCCCCccC---HHHHHHHHHHCCCeeEE
Confidence 34444455544442 11111 111 1111 22222 12222 3444444444 99999999999999999
Q ss_pred ec-CChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEE
Q 014320 234 HA-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIG 312 (427)
Q Consensus 234 H~-e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~ 312 (427)
|+ |...+. |. ..++...+ .+... +.|+...+. +.++++++.|+.++.
T Consensus 144 H~~e~~~~~----------g~----------------~~i~~~~~----~~~~~-i~H~~~l~~-~~~~~la~~g~~v~~ 191 (263)
T cd01305 144 HASETRESV----------GM----------------TDIERALD----LEPDL-LVHGTHLTD-EDLELVRENGVPVVL 191 (263)
T ss_pred ecCCCCCCC----------Cc----------------hhHHHHHh----CCCCE-EEEcCCCCH-HHHHHHHHcCCcEEE
Confidence 97 443211 00 01122222 13333 678877664 678999999988876
Q ss_pred ecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCch
Q 014320 313 EPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNG 392 (427)
Q Consensus 313 ~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~ 392 (427)
||...+. .+.. .+| ++++++.|+.+++|||..+++. .+. -
T Consensus 192 --~P~sn~~-----------l~~g---~~p---------~~~l~~~Gv~v~lGtD~~~~~~-~~~--------------~ 231 (263)
T cd01305 192 --CPRSNLY-----------FGVG---IPP---------VAELLKLGIKVLLGTDNVMVNE-PDM--------------W 231 (263)
T ss_pred --ChhhHHH-----------hCCC---CCC---------HHHHHHCCCcEEEECCCCccCC-CCH--------------H
Confidence 6642111 0011 244 4569999999999999754321 111 0
Q ss_pred hhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 393 IEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 393 ~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
.+.++....... ...+++.++++++|.|+||+
T Consensus 232 ~~~~~~~~~~~~--~~~~~~~~~l~~aT~~gA~~ 263 (263)
T cd01305 232 AEMEFLAKYSRL--QGYLSPLEILRMATVNAAEF 263 (263)
T ss_pred HHHHHHHHHhcc--cccCCHHHHHHHHhhccccC
Confidence 123332222111 12579999999999999986
No 103
>cd01304 FMDH_A Formylmethanofuran dehydrogenase (FMDH) subunit A; Methanogenic bacteria and archea derive the energy for autotrophic growth from methanogenesis, the reduction of CO2 with molecular hydrogen as the electron donor. FMDH catalyzes the first step in methanogenesis, the formyl-methanofuran synthesis. In this step, CO2 is bound to methanofuran and subsequently reduced to the formyl state with electrons derived from hydrogen.
Probab=99.72 E-value=2.2e-15 Score=148.32 Aligned_cols=228 Identities=25% Similarity=0.251 Sum_probs=132.9
Q ss_pred EECcEEEcCCC-c--eeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCc---CCCCChhhHHH-
Q 014320 57 IKGGTVVNAHH-Q--QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEF---MGSETIDDFFS- 129 (427)
Q Consensus 57 i~~~~i~~~~~-~--~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~---~g~~~~e~~~~- 129 (427)
|+|++|+++.. . .+.+|+|+||||++|++.. .+.++||++|++|+|||||+|+|+.... .....+|+-+.
T Consensus 1 Ikng~V~d~~~~~~~~~~dI~IedGkIv~Vg~~~---~~~~vID~~G~~VmPGfID~HtH~~gg~~~~~r~~~pe~~~~~ 77 (541)
T cd01304 1 IKNGTVYDPLNGINGEKMDIFIRDGKIVESSSGA---KPAKVIDASGKVVMAGGVDMHSHIAGGKVNVGRILRPEDHRRD 77 (541)
T ss_pred CEEEEEEcCCCcccccccEEEEECCEEEEEccCC---CCCeEEECCCCEEECCeeeeeeCccccccccccccChhhhhcc
Confidence 57899999765 2 5789999999999998743 2358999999999999999999987641 01122222221
Q ss_pred ---------------------HHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccccCC-------C
Q 014320 130 ---------------------GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKW-------D 181 (427)
Q Consensus 130 ---------------------~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 181 (427)
....+++.|.||+++...++.. .+.. -.+...-..++.+...-+... .
T Consensus 78 ~~~~~~~~~~~~g~~~pst~~tgy~ya~mGytt~~e~a~~p~~-a~h~---h~e~~~~p~~d~~~~~~~gnn~~~~~~~~ 153 (541)
T cd01304 78 PVPKGALRRAGVGFSVPSTLATGYRYAEMGYTTAFEAAMPPLN-ARHT---HEEMADTPILDKGAYPLLGNNWFVLEYLR 153 (541)
T ss_pred ccccccccccCCCccCCCchHhhhHHHhcCcceeecccCCccc-chhh---hHHhccCccccccceEEecchHHHHHHHh
Confidence 1134577899999987655432 1111 122222233443322111000 0
Q ss_pred hhhHHHHHHHH----HHcCCCeEEEEEecCC------------------CccCC-HHHHHHHHHHHHHcCCcEEEe--cC
Q 014320 182 EVVSDEMEVMV----KEKGINSFKFFMAYKG------------------SFMIN-DELLIEGFKRCKSLGALAMVH--AE 236 (427)
Q Consensus 182 ~~~~~~~~~l~----~~~g~~~ik~~~~~~~------------------~~~~~-~~~l~~~~~~a~~~g~~v~~H--~e 236 (427)
+...+.+..++ +..+.-++|+. .+.| .+.++ .+.++.+.+..+++|+|..+| |.
T Consensus 154 ~~~~~~~~~~vaw~l~~tk~~giK~v-npgG~~a~~~~~~~~~~d~~~~~~~vtp~~ii~~l~~~~~~lg~ph~iH~h~n 232 (541)
T cd01304 154 DGDMEKLAAYVAWTLKASKGYGIKVV-NPGGTEAWGWGQNVLSLDDPVPYFDITPREILKGLAEANEELGLPHSIHVHCN 232 (541)
T ss_pred cCCHHHHHHHHHHHHHhccceEEEEE-CCCchhhhccCCccccccCCCCCCCCCHHHHHHHHHHHHHhcCCceEEEEccc
Confidence 11122233322 22344567764 2211 13344 456777888888999877666 43
Q ss_pred ChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCC-----CEEEEcCCC-----------HHHHHHH
Q 014320 237 NGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNT-----PLYVVHVMS-----------MDAMEEI 300 (427)
Q Consensus 237 ~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~-----~~~i~H~~~-----------~~~~~~i 300 (427)
+- | .|.- .+...+.+++++.... .+|+.|++. ....+.+
T Consensus 233 nl-------------g----------~pgn--~~~t~~t~~~~~~~~~~~~~~~~h~tH~qfhsyg~~~~~~~~s~a~~i 287 (541)
T cd01304 233 NL-------------G----------VPGN--YETTLETMKAAEGVKPDPRRQVLHLTHVQFHSYGGTSWRDFESGAERI 287 (541)
T ss_pred cC-------------C----------CCCc--HHHHHHHHHHhhcCCCccccceeEeeeeeEEeeccCCcccHhHHHHHH
Confidence 32 1 1111 2333555666655543 489999951 3456778
Q ss_pred HHHhhcCCCEEEecCcc
Q 014320 301 AKARKAGQRVIGEPVVS 317 (427)
Q Consensus 301 ~~~~~~G~~v~~~~~p~ 317 (427)
..+..++-+|++++.+.
T Consensus 288 ~~~~n~~~~it~D~G~v 304 (541)
T cd01304 288 ADYVNANDHVTIDVGQV 304 (541)
T ss_pred HHHHHcCCCEEEEeCce
Confidence 88888888899887665
No 104
>cd01309 Met_dep_hydrolase_C Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=99.72 E-value=8.5e-16 Score=148.87 Aligned_cols=273 Identities=20% Similarity=0.114 Sum_probs=143.6
Q ss_pred CCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCC-------------Chh--------hHHHHHHHHH
Q 014320 77 DGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSE-------------TID--------DFFSGQAAAL 135 (427)
Q Consensus 77 ~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~-------------~~e--------~~~~~~~~~l 135 (427)
||||++|++....+.+.++||++|++|+|||||+|+|++....+.. +++ ........++
T Consensus 1 ~gkI~~i~~~~~~~~~~~vid~~g~~v~Pg~id~h~h~~~~~~~~~~~~~d~~e~~~~~~p~~~~~d~~~~~~~~~~~a~ 80 (359)
T cd01309 1 DGKIVAVGAEITTPADAEVIDAKGKHVTPGLIDAHSHLGLDEEGGVRETSDANEETDPVTPHVRAIDGINPDDEAFKRAR 80 (359)
T ss_pred CCEEEEEcCCCCCCCCCeEEeCCCCEEcCcEEecccccCccccCCCcCcCCccccCCCCCceeEeecccCCCCHhHHHHH
Confidence 7999999987665667899999999999999999999976522110 000 0012356788
Q ss_pred cCCceEEecCcCCCCC-cHHH-HHH----HHHHHhccc--cceecee--ccccC-------CCh-hhHHHHHHHHH---H
Q 014320 136 AGGTTMHIDFVIPING-SLTA-GFE----AYEKKAKNS--CMDYGFH--MAITK-------WDE-VVSDEMEVMVK---E 194 (427)
Q Consensus 136 ~~GvTtv~d~~~~~~~-~~~~-~~~----~~~~~~~~~--~~~~~~~--~~~~~-------~~~-~~~~~~~~l~~---~ 194 (427)
++|||++.-.....+. .... .++ ...+...+. .+.+.+. ..... ... .....+++... +
T Consensus 81 ~~GvT~~~v~p~~~~~~gg~~~~i~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~~~~~~p~trmg~~~~lr~~~~~a~~ 160 (359)
T cd01309 81 AGGVTTVQVLPGSANLIGGQGVVIKTDGGTIEDMFIKAPAGLKMALGENPKRVYGGKGKEPATRMGVAALLRDAFIKAQE 160 (359)
T ss_pred hcCceEEEecCCCCCcccceEEEEECCCCCHHHhcccCCceeEEecCCCCcccccccCCCccchHHHHHHHHHHHHHHHH
Confidence 9999999755322111 0000 000 000111111 1111111 00000 000 01111222110 1
Q ss_pred cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHH
Q 014320 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTR 274 (427)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~ 274 (427)
......+ +..........+..+..++..++.. +++.+|+..... +.+
T Consensus 161 y~~~~~~-~~~~~~~~~~~d~~l~~l~~~~~~~-~~v~vHa~~~~~-------------------------------i~~ 207 (359)
T cd01309 161 YGRKYDL-GKNAKKDPPERDLKLEALLPVLKGE-IPVRIHAHRADD-------------------------------ILT 207 (359)
T ss_pred HHHHhhh-hhhcccCCCCCCccHHHHHHHHcCC-eeEEEEeCCHHH-------------------------------HHH
Confidence 1000000 0000000111233455566555433 899999876543 344
Q ss_pred HHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHH
Q 014320 275 AIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQA 354 (427)
Q Consensus 275 ~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~ 354 (427)
+++++++.+.++.+.|+... .+.++++++.|+.+.. +|.+....... +. ......+.+
T Consensus 208 ~l~~~~e~g~~~~i~H~~~~--~~~~~~la~~gv~v~~--~P~~~~~~~~~----------------~~--~~~~~~~~~ 265 (359)
T cd01309 208 AIRIAKEFGIKITIEHGAEG--YKLADELAKHGIPVIY--GPTLTLPKKVE----------------EV--NDAIDTNAY 265 (359)
T ss_pred HHHHHHHcCCCEEEECchhH--HHHHHHHHHcCCCEEE--CccccccccHH----------------Hh--hcchhhHHH
Confidence 55666667788889999765 4677888889988775 56432211100 00 001123556
Q ss_pred HHhcC-CceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 355 ALATG-ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 355 ~l~~G-~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+++.| +.++++||+ |+..... +.... ......+++.+++++++|.|||++
T Consensus 266 l~~aGGv~valgsD~-~~~~~~~--------------------l~~~~-~~a~~~gl~~~~al~~~T~n~A~~ 316 (359)
T cd01309 266 LLKKGGVAFAISSDH-PVLNIRN--------------------LNLEA-AKAVKYGLSYEEALKAITINPAKI 316 (359)
T ss_pred HHHcCCceEEEECCC-CCccchh--------------------HHHHH-HHHHHcCCCHHHHHHHHHHHHHHH
Confidence 78887 999999998 4321111 11111 111235699999999999999985
No 105
>PF13147 Amidohydro_4: Amidohydrolase; PDB: 3SFW_B 2FTW_A 2PUZ_B 2GOK_B 3HM7_E 3D6N_A 1XRT_A 1XRF_A 1YNY_B 1K1D_F ....
Probab=99.69 E-value=1.3e-15 Score=143.78 Aligned_cols=280 Identities=22% Similarity=0.228 Sum_probs=147.0
Q ss_pred eCCCCEEeccccccccc--cccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceecee
Q 014320 97 DATGKFVMPGGIDPHTH--LAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFH 174 (427)
Q Consensus 97 D~~g~~v~PG~ID~H~H--~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (427)
|++|++|+|||||+|+| ......+....+......+.++.+|+|++++.... ........... .......
T Consensus 1 D~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~G~tt~~~~~~~---~~~~~~~~~~~-----~~~~~~~ 72 (304)
T PF13147_consen 1 DASGKYVLPGLIDLHVHGPLGRSEDGAPWAEQAAAASAAALAGGVTTVVDMPGT---NPEELNRARRR-----GAGYPGS 72 (304)
T ss_dssp E-TTSEEEE-EEEEEEECCSSCETTTEEHSSHHHHHHHHHHHTTEEEEEESSSS---SHHHHHHHHHH-----ESEEEEE
T ss_pred CCCCCEEccceeeeeeCCCcCCCCCCccchhhHHHHHHHHHhCCEeEEecCCCC---CchhhHHHHhh-----ccccccc
Confidence 89999999999999999 33332222333445566788899999999985322 12222222221 1111111
Q ss_pred ccccCCChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcC-CcEEEecCChhhHHHHHHHHHHcCC
Q 014320 175 MAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLG-ALAMVHAENGDAVFEGQKRMIELGI 253 (427)
Q Consensus 175 ~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g-~~v~~H~e~~~~~~~~~~~l~~~G~ 253 (427)
.............++.+.......++...+. ....+.+....+.+.+.+ +.+..|+... ........-.+...
T Consensus 73 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 146 (304)
T PF13147_consen 73 --GAGPRGTTIEELEALVDLIAAEGVGFVAAYN---GIEGPGLQAAIRAAHRAGVIKVVGHSPAD-GIEGAIAEGLDAME 146 (304)
T ss_dssp --CESCCHHHHHHHHHHHHHHHHTEEEEESSST---HHHHHHHHHHHHHHHHHTHEEEEEECHHH-HHHHHHHHHHHTTH
T ss_pred --cccccccchHHHHHHHHHHhhcCcceeeccc---cCCHHHHHHHHHHHHhcCCeeeecccchh-hHHHHHHhcccchh
Confidence 1111222233333333222233444433221 345677888888888999 4444454333 22111111000000
Q ss_pred CCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCccc
Q 014320 254 TGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVT 333 (427)
Q Consensus 254 ~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~ 333 (427)
. ....................+..+++.........+.+...+..++...+.. ........ .
T Consensus 147 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~----~-- 208 (304)
T PF13147_consen 147 H--------ILPHEVAEALHLAEALAQGAGPGLHCHVASDDATAEGVAIAHGFGLPPTPLH----LLARDAAA----A-- 208 (304)
T ss_dssp H--------STHHHHHHHHHHHHHHHHHHTHCEEEEETSSHHHHHHHHHHHHTTHEEEEEE----HHHHHHHH----H--
T ss_pred h--------hhhhhHHHHHHHHHHhhhccccchhhhhhhhhhhhHHHHHHHhhccccchHH----hhHHHHHh----c--
Confidence 0 0111112222222333333455555555555544333555555565544422 11111000 0
Q ss_pred CceeEEcCCCC--CcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCC
Q 014320 334 AAKYVMSPPIR--ASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQIS 411 (427)
Q Consensus 334 ~~~~~~~pplr--~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~ 411 (427)
+..++.+||++ ....+..+++++++|+.++++|||.++... +....+..+. ......+++
T Consensus 209 ~~~~~~~p~~~~~~~~~~~~~~~l~~~Gv~~~l~sD~~~~~~~-----------------~~~~~~~~~~-~~~~~~gl~ 270 (304)
T PF13147_consen 209 GIRFKVLPPLRLDLREDRAALRELLEAGVPVALGSDHAPSSTE-----------------GSGDLLHEAM-RLAVRAGLS 270 (304)
T ss_dssp GGGGEESSCHHHHTHHHHHHHHHHHHTTSSEEEEE-BBTTTTT-----------------CTTTHHHHHH-HHHHHTSST
T ss_pred CceeeeCCCccccchhhhHHHHHHHhCCCeEEEEcCCcccccc-----------------cccccchhhh-hHHhhcCCC
Confidence 24677889988 788899999999999999999999876532 0112333333 233347899
Q ss_pred HHHHHHHHchhhhcC
Q 014320 412 VTDYVRLTSTEWGRL 426 (427)
Q Consensus 412 l~~~v~~~t~npA~~ 426 (427)
++++++++|.|||++
T Consensus 271 ~~~al~~~T~~pA~~ 285 (304)
T PF13147_consen 271 PEEALRAATSNPARI 285 (304)
T ss_dssp HHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999985
No 106
>TIGR03121 one_C_dehyd_A formylmethanofuran dehydrogenase subunit A. Members of this largely archaeal protein family are subunit A of the formylmethanofuran dehydrogenase. Nomenclature in some bacteria may reflect inclusion of the formyltransferase described by TIGR03119 as part of the complex, and therefore call this protein formyltransferase/hydrolase complex Fhc subunit A. Note that this model does not distinguish tungsten (FwdA) from molybdenum-containing (FmdA) forms of this enzyme; a single gene from this family is expressed constitutively in Methanobacterium thermoautotrophicum, which has both tungsten and molybdenum forms and may work interchangeably.
Probab=99.67 E-value=4.4e-14 Score=139.92 Aligned_cols=94 Identities=33% Similarity=0.470 Sum_probs=69.2
Q ss_pred EEEECcEEEcCCC-c--eeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCc--CC-CCChhhHH
Q 014320 55 ILIKGGTVVNAHH-Q--QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEF--MG-SETIDDFF 128 (427)
Q Consensus 55 ~~i~~~~i~~~~~-~--~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~--~g-~~~~e~~~ 128 (427)
++|+|++|+++.. . ..++|+|+||+|++|++..+ .+.++||++|++|+|||||+|+|+..+. .+ ...++++.
T Consensus 2 ~iIkng~I~dp~~~~~~~~~dI~IedGkIveIg~~~~--~~~eVIDa~G~vVmPGfID~HvHg~gG~~~~~R~~~pE~~~ 79 (556)
T TIGR03121 2 ILIKNGTVYDPANGIDGEVMDIFIRDGKIVEPVSGGT--KPAKVIDASGKLVMAGGVDSHTHIAGPKVNVGRLLRPEDHR 79 (556)
T ss_pred EEEEeEEEEcCCCCccccccEEEEECCEEEEecCCCC--CCCeEEECCCCEEEeCEEeeeECCCccccccccccCHHHHh
Confidence 5899999999854 2 35799999999999986433 2357999999999999999999998741 11 12233332
Q ss_pred H----------------------HHHHHHcCCceEEecCcCCCC
Q 014320 129 S----------------------GQAAALAGGTTMHIDFVIPIN 150 (427)
Q Consensus 129 ~----------------------~~~~~l~~GvTtv~d~~~~~~ 150 (427)
. ....+++.|+||++|...++.
T Consensus 80 ~~~~~~~~~~r~Gtt~~lPTt~tt~y~ya~mGyTt~~eaa~~p~ 123 (556)
T TIGR03121 80 RDPEPRTGLTRAGSGFSVPSTYATGYRYARMGYTTVFEAAVPPL 123 (556)
T ss_pred hcchhhhhhcCCCcceEehhHhHHHHHHHhCCccEEecCCCCcc
Confidence 1 224568899999999876543
No 107
>cd01292 metallo-dependent_hydrolases Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The family includes urease alpha, adenosine deaminase, phosphotriesterase dihydroorotases, allantoinases, hydantoinases, AMP-, adenine and cytosine deaminases, imidazolonepropionase, aryldialkylphosphatase, chlorohydrolases, formylmethanofuran dehydrogenases and others.
Probab=99.65 E-value=1.5e-14 Score=134.59 Aligned_cols=247 Identities=21% Similarity=0.212 Sum_probs=138.1
Q ss_pred ccccccccccCcCCC------------CC----hhhHHHHHHHHHcCCceEEecCcCCCCC-----cHHHHHHHHHHH-h
Q 014320 107 GIDPHTHLAMEFMGS------------ET----IDDFFSGQAAALAGGTTMHIDFVIPING-----SLTAGFEAYEKK-A 164 (427)
Q Consensus 107 ~ID~H~H~~~~~~g~------------~~----~e~~~~~~~~~l~~GvTtv~d~~~~~~~-----~~~~~~~~~~~~-~ 164 (427)
|||+|+|+.++.... .+ .+........++++||||++++...... .....++...+. +
T Consensus 1 ~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvttv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (275)
T cd01292 1 FIDTHVHLDGSALRGTRLNLELKEAEELSPEDLYEDTLRALEALLAGGVTTVVDMGSTPPPTTTKAAIEAVAEAARASAG 80 (275)
T ss_pred CcccchhhHHHHHccCCCccccccccccCHHHHHHHHHHHHHHHHhcCceEEEeeEeecCccccchHHHHHHHHHHHhcC
Confidence 799999988752111 11 2234455677899999999998654332 122222333222 1
Q ss_pred ccccceeceeccccCCCh----hhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhh
Q 014320 165 KNSCMDYGFHMAITKWDE----VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDA 240 (427)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~ 240 (427)
.+..+..+.+.......+ ...+.+.+.. ..|+.++++...... ...+.+.++++++.|+++|+++.+|+.+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~gi~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~i~~H~~~~~~ 158 (275)
T cd01292 81 IRVVLGLGIPGVPAAVDEDAEALLLELLRRGL-ELGAVGLKLAGPYTA-TGLSDESLRRVLEEARKLGLPVVIHAGELPD 158 (275)
T ss_pred eeeEEeccCCCCccccchhHHHHHHHHHHHHH-hcCCeeEeeCCCCCC-CCCCcHHHHHHHHHHHHcCCeEEEeeCCccc
Confidence 121111111111000011 1223333322 246778876554332 1247899999999999999999999854321
Q ss_pred HHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCcccee
Q 014320 241 VFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLV 320 (427)
Q Consensus 241 ~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~ 320 (427)
. ...+.+.++.... +.++.+.|+...+. +.++.+++.|+ ..++||.+..
T Consensus 159 ~---------------------------~~~~~~~~~~~~~-~~~~~~~H~~~~~~-~~~~~~~~~g~--~~~~~~~~~~ 207 (275)
T cd01292 159 P---------------------------TRALEDLVALLRL-GGRVVIGHVSHLDP-ELLELLKEAGV--SLEVCPLSNY 207 (275)
T ss_pred C---------------------------ccCHHHHHHHHhc-CCCEEEECCccCCH-HHHHHHHHcCC--eEEECCcccc
Confidence 0 0011222233222 57889999987532 55777777775 4456887554
Q ss_pred eCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHH
Q 014320 321 LDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLV 400 (427)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~ 400 (427)
+.. +.......++++++.|..+++|||+.+...... ++..
T Consensus 208 ~~~--------------------~~~~~~~~~~~~~~~g~~~~lgTD~~~~~~~~~--------------------~~~~ 247 (275)
T cd01292 208 LLG--------------------RDGEGAEALRRLLELGIRVTLGTDGPPHPLGTD--------------------LLAL 247 (275)
T ss_pred ccc--------------------CCcCCcccHHHHHHCCCcEEEecCCCCCCCCCC--------------------HHHH
Confidence 321 001112346778999999999999855421111 1111
Q ss_pred HHHHHh--cCCCCHHHHHHHHchhhhcC
Q 014320 401 WDTMVE--SGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 401 ~~~~~~--~~~l~l~~~v~~~t~npA~~ 426 (427)
+..++. ..++++.++++++|.||||.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~t~n~a~~ 275 (275)
T cd01292 248 LRLLLKVLRLGLSLEEALRLATINPARA 275 (275)
T ss_pred HHHHHHHHhcCCCHHHHHHHHhccccCC
Confidence 111111 22389999999999999984
No 108
>PF13594 Amidohydro_5: Amidohydrolase; PDB: 4F0R_A 4F0S_A 1NFG_C 2FVM_A 2FVK_A 2FTY_D 1YBQ_B 1POJ_B 1ONW_A 2AQO_B ....
Probab=99.61 E-value=1.1e-15 Score=110.56 Aligned_cols=67 Identities=51% Similarity=0.671 Sum_probs=47.7
Q ss_pred EEEeCCeEEEeeCCCCCC-CCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHHHHHHcCCceEE
Q 014320 73 VYVEDGIVVAVQPNINVG-DDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMH 142 (427)
Q Consensus 73 i~i~~g~I~~vg~~~~~~-~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv 142 (427)
|+|+||||++|++....+ ++.++||++|++|+|||||+|+|+..+ .. ...........++++||||+
T Consensus 1 V~I~~g~I~~v~~~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~--~~-~~~~~~~~~~~~l~~GvTTV 68 (68)
T PF13594_consen 1 VLIEDGKIVAVGPDSELPADAAEVIDAKGKYVMPGFIDMHTHLGEP--GW-QSLDPETEAAAALAGGVTTV 68 (68)
T ss_dssp EEEETTEEEEEESSCCTTSTCCEEEEETTCEEEE-EEEEEE-TTTT--CE-GGCTCHHHHHHHHHTTEEEE
T ss_pred CEEECCEEEEeCCCCCCCCCCCEEEECCCCEEeCCeEeeeeccccc--cc-cccchhhHHHHHHCcceeeC
Confidence 789999999997654433 456789999999999999999997643 11 11111334566789999997
No 109
>COG0418 PyrC Dihydroorotase [Nucleotide transport and metabolism]
Probab=99.58 E-value=7e-13 Score=118.50 Aligned_cols=284 Identities=17% Similarity=0.151 Sum_probs=173.7
Q ss_pred EEeccccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhcc-ccc--eeceeccc
Q 014320 102 FVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKN-SCM--DYGFHMAI 177 (427)
Q Consensus 102 ~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~-~~~--~~~~~~~~ 177 (427)
+-+..-.|.|+|+.+. . +.....-..+-++.-.+-|.+-.+. ...+...++++.-.. ..- .+-..+..
T Consensus 5 l~i~rPdDwHlHLRdg--~------mL~~V~p~ts~~f~rAiIMPNL~pPvtt~~~a~aYr~rIl~a~p~~~~F~PLMtl 76 (344)
T COG0418 5 LTIRRPDDWHLHLRDG--A------MLKAVVPYTSRGFGRAIIMPNLVPPVTTVADALAYRERILKAVPAGHRFTPLMTL 76 (344)
T ss_pred eeccCccceeEEecCc--c------HHHHhhhhhhhhcceEEEcCCCCCCcccHHHHHHHHHHHHHhCcCCCCCceeEEE
Confidence 4467788999999875 1 1111112223355556666543332 223333344443321 111 11111111
Q ss_pred cCCChhhHHHHHHHHHHcC-CCeEEEEEec----CCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcC
Q 014320 178 TKWDEVVSDEMEVMVKEKG-INSFKFFMAY----KGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELG 252 (427)
Q Consensus 178 ~~~~~~~~~~~~~l~~~~g-~~~ik~~~~~----~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G 252 (427)
.-.+....+++++.. ..| +.++|.|-.. +.....+-+.+..+++.+++.|+++.+|.|-........+
T Consensus 77 YLtd~~~peel~~a~-~~g~i~a~KlYPaGaTTNS~~GV~~~~~~~pvle~Mq~~gmpLlvHGEvt~~~vDifd------ 149 (344)
T COG0418 77 YLTDSTTPEELEEAK-AKGVIRAVKLYPAGATTNSDSGVTDIEKIYPVLEAMQKIGMPLLVHGEVTDAEVDIFD------ 149 (344)
T ss_pred EecCCCCHHHHHHHH-hcCcEEEEEeccCCccccCcCCcCcHHHHHHHHHHHHHcCCeEEEecccCCccccchh------
Confidence 111222345566655 555 6788988653 1112235678889999999999999999875432211100
Q ss_pred CCCcccccccCCHHHHHHHHHHHHHHHHh--cCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCC
Q 014320 253 ITGPEGHALSRPPLLEGEATTRAIRLAEF--VNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSD 330 (427)
Q Consensus 253 ~~~~~~~~~~~p~~~e~~a~~~~~~~~~~--~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~ 330 (427)
.|..-+...++-.++ -..++.++|+++.++++.++. .+.++.+..+||||+++.++..-.+
T Consensus 150 --------------rE~~Fi~~vl~pl~~~fP~LKIV~EHiTT~dav~~v~~---~~~nlaATIT~hHL~~nrnd~l~Gg 212 (344)
T COG0418 150 --------------REAAFIESVLEPLRQRFPKLKIVLEHITTKDAVEYVKD---ANNNLAATITPHHLLLNRNDMLVGG 212 (344)
T ss_pred --------------hHHHHHHHHHHHHHhhCCcceEEEEEeccHHHHHHHHh---cCcceeeEeehhheeeehhhhhcCC
Confidence 112223333332222 246799999999988766654 4556999999999999988765323
Q ss_pred cccCceeEEcCCCCCcccHHHHHHHHhcCC-ceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCC
Q 014320 331 FVTAAKYVMSPPIRASGHNKALQAALATGI-LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQ 409 (427)
Q Consensus 331 ~~~~~~~~~~pplr~~~~~~~l~~~l~~G~-~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~ 409 (427)
.+ ..+.|.|-++.+.||++|.++.-+|- ...+|||.+||....|.. .+...|+-+.-..++.+- + +-+..
T Consensus 213 i~--Ph~fClPilKr~~hr~AL~~aa~sg~~kfFlGtDSAPH~~~~Ke~-----~cgcAG~fsap~al~~~A-e-vFE~~ 283 (344)
T COG0418 213 IR--PHLFCLPILKRETHREALREAATSGHPKFFLGTDSAPHARSRKES-----ACGCAGIFSAPFALPLYA-E-VFEEE 283 (344)
T ss_pred CC--cceeeeccccchhhHHHHHHHHhcCCCcEEecCCCCCCccccccc-----ccccccccccHhHHHHHH-H-HHHHh
Confidence 22 46779999999999999999888777 499999999999888753 233455555555566543 2 23444
Q ss_pred CCHHHHHHHHchhhhcC
Q 014320 410 ISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 410 l~l~~~v~~~t~npA~~ 426 (427)
=.++.+-..+|.|+.++
T Consensus 284 naL~~LeaF~S~nGp~f 300 (344)
T COG0418 284 NALDNLEAFASDNGPKF 300 (344)
T ss_pred cHHHHHHHHHhhcCcce
Confidence 67777888899998765
No 110
>COG3653 N-acyl-D-aspartate/D-glutamate deacylase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.56 E-value=2.8e-13 Score=126.10 Aligned_cols=85 Identities=27% Similarity=0.394 Sum_probs=67.1
Q ss_pred CccEEEECcEEEcCCC--ceeeeEEEeCCeEEEeeCCCCCC-CCceEEeCCCCEEeccccccccccccCcCCCCChhhHH
Q 014320 52 SSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVG-DDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFF 128 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~--~~~~~i~i~~g~I~~vg~~~~~~-~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~ 128 (427)
.+|++|+++.|+|+.+ ....+|.|+||+|++|+...... ...++||+.|++|.|||||+|+|..... ..++.
T Consensus 5 ~YD~ViR~g~ifDGtGnp~f~tdvgIrDGvIaav~kg~~dg~~~~eevDaagriVaPGFIDvHtHyD~~~--~~d~~--- 79 (579)
T COG3653 5 TYDVVIRDGLIFDGTGNPPFTTDVGIRDGVIAAVAKGALDGTGCPEEVDAAGRIVAPGFIDVHTHYDAEV--LLDPG--- 79 (579)
T ss_pred eeeEEEeeceEEeCCCCCccccccccccceEEEEecccccccCCCeeecccCcEecccEEEeeeccccee--eecCC---
Confidence 5799999999999876 45679999999999999865432 2448999999999999999999976431 11111
Q ss_pred HHHHHHHcCCceEEe
Q 014320 129 SGQAAALAGGTTMHI 143 (427)
Q Consensus 129 ~~~~~~l~~GvTtv~ 143 (427)
.+..+.+|||||+
T Consensus 80 --l~psv~hGVTTVv 92 (579)
T COG3653 80 --LRPSVRHGVTTVV 92 (579)
T ss_pred --ccchhhcCeeEEE
Confidence 4556889999997
No 111
>cd01306 PhnM PhnM is believed to be a subunit of the membrane associated C-P lyase complex. C-P lyase is thought to catalyze the direct cleavage of inactivated C-P bonds to yield inorganic phosphate and the corresponding hydrocarbons. It is responsible for cleavage of alkylphosphonates, which are utilized as sole phosphorus sources by many bacteria.
Probab=99.55 E-value=4e-13 Score=126.76 Aligned_cols=236 Identities=18% Similarity=0.164 Sum_probs=136.9
Q ss_pred eccccccccccccC----cCCCC--ChhhHHHHHHHHHcCCceEEecCcCCC----C--C--cHHHHHHHHHHHh--ccc
Q 014320 104 MPGGIDPHTHLAME----FMGSE--TIDDFFSGQAAALAGGTTMHIDFVIPI----N--G--SLTAGFEAYEKKA--KNS 167 (427)
Q Consensus 104 ~PG~ID~H~H~~~~----~~g~~--~~e~~~~~~~~~l~~GvTtv~d~~~~~----~--~--~~~~~~~~~~~~~--~~~ 167 (427)
+||+||.|+--.+. -.|.. ....+....+..+.+||||+.|.-... . . .....++...... ...
T Consensus 1 lPG~vdlH~D~~E~~~~PRp~v~~~~~~a~~~~d~~~~a~GiTT~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (325)
T cd01306 1 LPGLIDLHTDNLEKHVMPRPGVDWPMDIALAAHDRQLAAAGITTVFDALSFGDEEGGRRRLRNLRKLIDAIRELHARGVL 80 (325)
T ss_pred CCCeEEecCcchhcccCCCCCCCCCHHHHHHHHHHHHHhcCcccceeeeEeccccCCcccHHHHHHHHHHHHHhhhCCcc
Confidence 69999999964332 11211 122334455677999999999853221 1 1 2223333333332 234
Q ss_pred cceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecC-C-----------------------------------Ccc
Q 014320 168 CMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYK-G-----------------------------------SFM 211 (427)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~-~-----------------------------------~~~ 211 (427)
..+..+|........+..+.+.++++...+..+ .+++.. + ...
T Consensus 81 ~~d~~~hlR~E~~~~~~~~~~~~~~~~~~v~lv-s~~dH~pg~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (325)
T cd01306 81 RADHRLHLRCELADPAVLPELESLMADPRVHLV-SLMDHTPGQRQFRDLEKYREYYAKKYGLSDEEVEEAILERKARAAA 159 (325)
T ss_pred hhhcceEEEEeecCccHHHHHHHHhcCCCcCEE-EEeCCCCccccccCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHhhh
Confidence 556666665555556667777777733334433 344410 0 012
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEecCC-hhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEc
Q 014320 212 INDELLIEGFKRCKSLGALAMVHAEN-GDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVH 290 (427)
Q Consensus 212 ~~~~~l~~~~~~a~~~g~~v~~H~e~-~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H 290 (427)
.+.+.++++++.|+++|+++.+|... .+.+ +... +.|+.. +.|
T Consensus 160 ~~~~~~~~iv~~A~~~gl~vasH~d~~~~~v----~~a~-------------------------------~~Gv~~-~E~ 203 (325)
T cd01306 160 YAPANRSELAALARARGIPLASHDDDTPEHV----AEAH-------------------------------ELGVVI-SEF 203 (325)
T ss_pred cCHHHHHHHHHHHHHCCCcEEEecCCChHHH----HHHH-------------------------------HCCCee-ccC
Confidence 34677888888999999999999743 3222 1122 233332 345
Q ss_pred CCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCC
Q 014320 291 VMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCA 370 (427)
Q Consensus 291 ~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p 370 (427)
..+ .+.++.+++.|+.|.+. .|. +.. .++ ...+..++++++.|+.++++||+.|
T Consensus 204 p~t---~e~a~~a~~~G~~vv~g-apn-~lr-----------g~s----------~~g~~~~~~ll~~Gv~~al~SD~~p 257 (325)
T cd01306 204 PTT---LEAAKAARELGLQTLMG-APN-VVR-----------GGS----------HSGNVSARELAAHGLLDILSSDYVP 257 (325)
T ss_pred CCC---HHHHHHHHHCCCEEEec-Ccc-ccc-----------Ccc----------ccccHhHHHHHHCCCeEEEEcCCCc
Confidence 433 35577788889887752 221 100 000 0112347889999999999999976
Q ss_pred CChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 371 FNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
... +...+ .+....+++++++++++|.|||++
T Consensus 258 ~sl-----------------------l~~~~-~la~~~gl~l~eAl~~aT~nPA~~ 289 (325)
T cd01306 258 ASL-----------------------LHAAF-RLADLGGWSLPEAVALVSANPARA 289 (325)
T ss_pred HhH-----------------------HHHHH-HHHHHcCCCHHHHHHHHhHHHHHH
Confidence 421 11223 344456799999999999999985
No 112
>PRK06886 hypothetical protein; Validated
Probab=99.50 E-value=2.7e-12 Score=121.48 Aligned_cols=253 Identities=15% Similarity=0.154 Sum_probs=135.0
Q ss_pred ccccccccccccCcC-----------CC--------------CChhhHH----HHHHHHHcCCceEEecCcCCCCC---c
Q 014320 105 PGGIDPHTHLAMEFM-----------GS--------------ETIDDFF----SGQAAALAGGTTMHIDFVIPING---S 152 (427)
Q Consensus 105 PG~ID~H~H~~~~~~-----------g~--------------~~~e~~~----~~~~~~l~~GvTtv~d~~~~~~~---~ 152 (427)
-||||.|+|+...+. |. .+.++++ ...+.++..|||.++.+....+. .
T Consensus 20 ~gfv~~H~HlDk~~~~~~~~~~~~~~g~l~e~i~~~~~~k~~~t~~dv~~Ra~~~l~~~~~~Gtt~iRtHvdvd~~~~l~ 99 (329)
T PRK06886 20 GGWVNAHAHADRAFTMTPEKIAIYHYANLQQKWDLVDEVKRNSTVEDYYARFSQAIELMISQGVTAFGTFVDIDPICEDR 99 (329)
T ss_pred cCCccccccccccccCCCccccccCCCCHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHcCcccEeeeeccCCCcccc
Confidence 389999999987531 10 0222332 23455789999999876533221 2
Q ss_pred HHHHHHHHHHHh-cccccee-cee-ccccCCChhhHHHHHHHHHHcCCCeEEEEEecCC---CccCCHHHHHHHHHHHHH
Q 014320 153 LTAGFEAYEKKA-KNSCMDY-GFH-MAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKG---SFMINDELLIEGFKRCKS 226 (427)
Q Consensus 153 ~~~~~~~~~~~~-~~~~~~~-~~~-~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~---~~~~~~~~l~~~~~~a~~ 226 (427)
..+.+.+.++.- .+.-+.+ .|. .+.. .....+.+.+.. +. ++.+.-. |+. ....+.+.++.+++.|++
T Consensus 100 ~~~a~~~~r~~~~~~idlq~vafPq~g~~--~~~~~~l~~~al-~~-advvGGi--P~~~~~~~~~~~e~l~~~~~lA~~ 173 (329)
T PRK06886 100 AIIAAHKAREVYKHDIILKFANQTLKGVI--EPTAKKWFDIGS-EM-VDMIGGL--PYRDELDYGRGLEAMDILLDTAKS 173 (329)
T ss_pred HHHHHHHHHHHhcCcceEEEEecChhhcc--CccHHHHHHHHH-Hh-CCEEeCc--cCCcCCCCCCCHHHHHHHHHHHHH
Confidence 333333333322 2222222 111 1111 122223344443 23 4443322 221 123568899999999999
Q ss_pred cCCcEEEec-CChhhHHHHHHH----HHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHH-----
Q 014320 227 LGALAMVHA-ENGDAVFEGQKR----MIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDA----- 296 (427)
Q Consensus 227 ~g~~v~~H~-e~~~~~~~~~~~----l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~----- 296 (427)
+|+++++|+ |..+.....++. ..+.|+ ..++.+.|+.....
T Consensus 174 ~g~~Id~Hlde~~~~~~~~le~l~~~~~~~Gl-----------------------------~grV~~sH~~~L~~~~~~~ 224 (329)
T PRK06886 174 LGKMVHVHVDQFNTPKEKETEQLCDKTIEHGM-----------------------------QGRVVAIHGISIGAHSKEY 224 (329)
T ss_pred cCCCeEEeECCCCchhHHHHHHHHHHHHHcCC-----------------------------CCCEEEEEeccccCcChhh
Confidence 999999997 544332222211 112222 23788999876432
Q ss_pred -HHHHHHHhhcCCCEEEecCccc-eeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCC--CCC
Q 014320 297 -MEEIAKARKAGQRVIGEPVVSG-LVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHC--AFN 372 (427)
Q Consensus 297 -~~~i~~~~~~G~~v~~~~~p~~-l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~--p~~ 372 (427)
.+.++.+++.|+.|++ ||.. ++++..... . ....-.+| +.++++.|+++++|||+. ||.
T Consensus 225 ~~~~i~~La~agi~Vv~--~P~snl~l~~~~~~---~---p~~rGv~p---------v~eL~~aGV~V~lGtDnv~D~~~ 287 (329)
T PRK06886 225 RYRLYQKMREADMMVIA--CPMAWIDSNRKEDL---M---PFHNALTP---------ADEMIPEGITVALGTDNICDYMV 287 (329)
T ss_pred HHHHHHHHHHcCCeEEE--Cchhhhhhcccccc---C---cCCCCCCC---------HHHHHHCCCeEEEecCCCcccCC
Confidence 3468889999998887 6643 222211100 0 00011233 567999999999999975 332
Q ss_pred hhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 373 STQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 373 ~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+ .|...+-..+-++. .. .+..++.++++++|.|+||.
T Consensus 288 p--------------~g~~Dmle~~~l~~-~~--~~~~~~~~~l~maT~~gAra 324 (329)
T PRK06886 288 P--------------LCEGDMWQELSLLA-AG--CRFYDLDEMVNIASINGRKV 324 (329)
T ss_pred C--------------CCCCCHHHHHHHHH-HH--cCCCCHHHHHHHHhhhHHHH
Confidence 2 12211111111111 11 23357999999999999984
No 113
>COG0804 UreC Urea amidohydrolase (urease) alpha subunit [Amino acid transport and metabolism]
Probab=99.49 E-value=9e-13 Score=121.75 Aligned_cols=169 Identities=18% Similarity=0.229 Sum_probs=129.4
Q ss_pred CccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCC----------CCCceEEeCCCCEEeccccccccccccCcCCC
Q 014320 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV----------GDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS 121 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~----------~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~ 121 (427)
-.|++|.|+.|+|..++..++|-|+||||++||..... .+.+++|-+.|+++.-|-||+|+|+-.+
T Consensus 66 ~~D~VITNa~IiD~~Gi~KADiGikdGrI~~IGKaGNPd~~dgV~iiiG~sTe~iagEg~I~TAGGiDtHiHfI~P---- 141 (568)
T COG0804 66 ALDLVITNALIIDYWGIVKADIGIKDGRIAGIGKAGNPDIMDGVTIIIGPSTEIIAGEGKIVTAGGIDTHIHFICP---- 141 (568)
T ss_pred cccEEEeeeEEEeccceEEeecccccceEEEeecCCCCCccCCceEEeccccceecCCceEEeeccccceeEEecH----
Confidence 46899999999999999999999999999999975432 2357889999999999999999998776
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcCCCC-C-------cHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHH
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVIPIN-G-------SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVK 193 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 193 (427)
+ ....++.+||||++--+..+. . ...-.++.+.++....++++++.+--.. .....+.+.+
T Consensus 142 ---q----qi~~Al~sGiTtmiGGGtGpa~Gt~aTT~TpG~w~i~rMl~a~d~~p~N~g~lgKGn~---s~~~~L~Eqi- 210 (568)
T COG0804 142 ---Q----QIEEALASGITTMIGGGTGPADGTNATTCTPGPWHIARMLQAADGLPMNIGFLGKGNA---SNPAPLAEQI- 210 (568)
T ss_pred ---H----HHHHHHhcCcEEEecCccCCCCCcccccccCCHHHHHHHHHhhhcCceeeEEeecCCC---CCchhHHHHH-
Confidence 1 256789999999985321111 0 2233455666666677888888653222 2234466667
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChh
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGD 239 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~ 239 (427)
..|+.++|+.-+|. .++..+..++..|.+++++|.+|..+-.
T Consensus 211 ~aGa~GlKlHEDWG----~TpaaI~~~L~VAD~~DvqVaiHtDTLN 252 (568)
T COG0804 211 EAGAIGLKLHEDWG----ATPAAIDTCLSVADEYDVQVAIHTDTLN 252 (568)
T ss_pred hhccceeEeecccC----CCHHHHHHHHhhhhhhceEEEEeecccc
Confidence 78999999988775 5788999999999999999999975543
No 114
>KOG2902 consensus Dihydroorotase [Nucleotide transport and metabolism]
Probab=99.36 E-value=6.8e-11 Score=102.26 Aligned_cols=242 Identities=16% Similarity=0.111 Sum_probs=151.4
Q ss_pred EEeccccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCC--cHHHHHHHHHHHhccccceeceeccccC
Q 014320 102 FVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING--SLTAGFEAYEKKAKNSCMDYGFHMAITK 179 (427)
Q Consensus 102 ~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (427)
+-+|+.-|+|+|+.+. .... .- .--...+||.-..-|.+-.+. ...+.+. +++...+..-.-.+.+.+.-
T Consensus 5 l~i~~~~DmHvHlR~g--~ml~-aV----vP~~a~ggvs~AyvMPNL~PPiTt~da~i~-YkK~i~kL~skttfLMslYL 76 (344)
T KOG2902|consen 5 LTITQPDDMHVHLRDG--DMLH-AV----VPHSASGGVSRAYVMPNLKPPITTTDAAII-YKKFIMKLPSKTTFLMSLYL 76 (344)
T ss_pred EecCCccceeEEeccC--Ceee-ee----ccccccCceeEEEEcCCCCCCcchHHHHHH-HHHHHHhcCccceeEEEEee
Confidence 3478999999999885 2111 00 112356789988888654333 3333333 33332221111112222222
Q ss_pred CChhhHHHHHHHHHHcCCCeEEEEEecCCC---ccC--CHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCC
Q 014320 180 WDEVVSDEMEVMVKEKGINSFKFFMAYKGS---FMI--NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGIT 254 (427)
Q Consensus 180 ~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~---~~~--~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~ 254 (427)
..+...+.+.+..+..++.++|.|-..... ..+ .-+.+..++++..+.|+++.+|-|-+.....
T Consensus 77 s~~ttPe~I~eAa~~~~irgVK~YPaGaTTNS~~GV~~~f~~fyPvf~aMqe~nm~LnvHGEvpps~D~----------- 145 (344)
T KOG2902|consen 77 SDKTTPEEIREAAESGVIRGVKLYPAGATTNSQDGVTDLFGKFYPVFEAMQEQNMPLNVHGEVPPSIDG----------- 145 (344)
T ss_pred cCCCCHHHHHHHHHhCceeeEEeccCcccccccccccccchhhhHHHHHHHHcCceEEecCCCCCccCC-----------
Confidence 222234456666645567789987653111 111 2356778899999999999999876543311
Q ss_pred CcccccccCCHHHHHHHHHHHHHHHHhc-CCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCccc
Q 014320 255 GPEGHALSRPPLLEGEATTRAIRLAEFV-NTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVT 333 (427)
Q Consensus 255 ~~~~~~~~~p~~~e~~a~~~~~~~~~~~-g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~ 333 (427)
|.. .+|..-+...+++-... ..++.+.|+++.++++.++.++ +..|.+.+++|||+++.+++..
T Consensus 146 ----~Vf----~aE~~Flptll~LhqrfP~LKivlEHcTt~dAv~~ve~a~--~~sVaaTvTahHL~Lt~~dwqg----- 210 (344)
T KOG2902|consen 146 ----HVF----DAEKIFLPTLLQLHQRFPQLKIVLEHCTTMDAVNFVESAK--EGSVAATVTAHHLLLTRNDWQG----- 210 (344)
T ss_pred ----cee----cchhhhHHHHHHHHHhCccceeHHHhcccHHHHHHHHhhc--CCceeeEeehheeEEehhhhcC-----
Confidence 100 01222233334443332 4568899999999988888765 4678888899999999877532
Q ss_pred CceeEEcCCCCCcccHHHHHHHHhcCCc-eEEecCCCCCChhhhh
Q 014320 334 AAKYVMSPPIRASGHNKALQAALATGIL-QLVGTDHCAFNSTQKA 377 (427)
Q Consensus 334 ~~~~~~~pplr~~~~~~~l~~~l~~G~~-~~lgSD~~p~~~~~~~ 377 (427)
.....|.|..+.+.||++|.++.-+|-. ..+|||.+||....|.
T Consensus 211 ~P~nfCkPVaK~e~dr~AlvkAatSg~pkFFfGsDSAPHprs~K~ 255 (344)
T KOG2902|consen 211 QPHNFCKPVAKREIDREALVKAATSGSPKFFFGSDSAPHPRSRKE 255 (344)
T ss_pred CCcccccccccCcccHHHHHHHHhcCCCceeecCCCCCCcccccc
Confidence 1344578889999999999999888875 8899999999988875
No 115
>PF01979 Amidohydro_1: Amidohydrolase family; InterPro: IPR006680 This group of enzymes represents a large metal dependent hydrolase superfamily []. The family includes adenine deaminase (3.5.4.2 from EC) that hydrolyses adenine to form hypoxanthine and ammonia. The adenine deaminase reaction is important for adenine utilization as a purine and also as a nitrogen source []. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases (3.5.1.25 from EC). These enzymes catalyse the reaction: N-acetyl-D-glucosamine 6-phosphate + H2O = D-glucosamine 6-phosphate + acetateThis family includes dihydroorotase and urease which belong to MEROPS peptidase family M38 (beta-aspartyl dipeptidase, clan MJ), where they are classified as non-peptidase homologs. ; GO: 0016787 hydrolase activity; PDB: 1O12_A 2KAU_C 1FWD_C 1A5M_C 1FWC_C 1FWI_C 1EJV_C 1FWH_C 1A5L_C 1KRA_C ....
Probab=99.35 E-value=8.3e-12 Score=120.05 Aligned_cols=135 Identities=22% Similarity=0.258 Sum_probs=74.2
Q ss_pred EEeccccccccccccCcCCCC-------ChhhHHHHHHHHHcCCceEEecCcCCCCCcH---HHHHHHHHHHhcc-----
Q 014320 102 FVMPGGIDPHTHLAMEFMGSE-------TIDDFFSGQAAALAGGTTMHIDFVIPINGSL---TAGFEAYEKKAKN----- 166 (427)
Q Consensus 102 ~v~PG~ID~H~H~~~~~~g~~-------~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~---~~~~~~~~~~~~~----- 166 (427)
+|+|||||+|+|+.++ ... ..+.+....+.++++||||++|+........ ............+
T Consensus 1 ~v~PGlID~H~H~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (333)
T PF01979_consen 1 YVMPGLIDAHVHGGQG--GLRGLLDPEDHYESIRTGAKAALKGGVTTVLDTPHTSPNPDIELRNEIMEGLAAAPKIEPAM 78 (333)
T ss_dssp EEEE-EEEEEEEGGGT--THTTSSSHHHHHHHHHHHHHHHHHTTEEEEEEEEESSHCHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred CEEcChhHHhhCcCCc--CccccCCHHHHHHHHHHHHHHHHhcCeEEEEcCcccCCccccccccccccccccchhhhccc
Confidence 6999999999999987 333 3455667788899999999999853322211 1111111111111
Q ss_pred ccc---eeceeccccCCChhh---------HHHHHHHHHHcCCC-----eEEEEEecCCCccCCHHHHHHHHHHHHH---
Q 014320 167 SCM---DYGFHMAITKWDEVV---------SDEMEVMVKEKGIN-----SFKFFMAYKGSFMINDELLIEGFKRCKS--- 226 (427)
Q Consensus 167 ~~~---~~~~~~~~~~~~~~~---------~~~~~~l~~~~g~~-----~ik~~~~~~~~~~~~~~~l~~~~~~a~~--- 226 (427)
..+ ..+.+........+. ..++.+.....+.. .+...........++.+.++..++.+++
T Consensus 79 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 158 (333)
T PF01979_consen 79 TLLGTGSVGGHGEGPNEPPDKNGPHDEAFEGEDFIKFIEEAGSEIKRIDGVIPAISPHNPYTVSDEELREAVELAKEFLA 158 (333)
T ss_dssp EEEEECECSEEEECHHHHHHHHSEHHHHHHHHHHHHHHHHHTTTCEEEECEEEEEEHHTTTTSCHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccCCchhhhHHHHHHHhhhhhhhhcccccccccccccccccchhhhhhhHHhhhhhHHH
Confidence 011 111111110000000 11222222222211 3444555666778899999999999988
Q ss_pred --c-CCcEEEecCCh
Q 014320 227 --L-GALAMVHAENG 238 (427)
Q Consensus 227 --~-g~~v~~H~e~~ 238 (427)
. ++++++|+.+.
T Consensus 159 ~~~~~~~~~~h~~~~ 173 (333)
T PF01979_consen 159 AEKLGIPVHIHVAEG 173 (333)
T ss_dssp HHHHTHEEEEEESSS
T ss_pred HHhhcccceeeeccC
Confidence 3 99999997443
No 116
>PF07969 Amidohydro_3: Amidohydrolase family; InterPro: IPR013108 Amidohydrolases are a diverse superfamily of enzymes which catalyse the hydrolysis of amide or amine bonds in a large number of different substrates including urea, cytosine, AMP, formylmethanofuran, etc [, ]. Also included in this superfamily are the phopshotriesterase enzymes, which hydrolyse P-O bonds. Members participate in a large number of processes including nucleotide metabolism, detoxification and neuronal development. They use a variety of divalent metal cofactors for catalysis: for example adenosine deaminase binds a single zinc ion, phopsphotriesterase binds two, while urease binds nickel. It has been postulated that since some of these proteins, such as those some of those involved in neuronal devlopment, appear to have lost their metal-binding centres, their function may simply be to bind, but not hydrolyse, their target molecules. This entry represents a subset of amidohydrolase domains that participate in different functions including cytosine degradation, atrazine degradation and other metabolic processes. The structure of the domain from Escherichia coli has been studied, and like other amidohydrolases it forms a classical alpha-beta TIM-barrel fold []. The active site is located in the mouth of the enzyme barrel and contains a bound iron ion that coordinates a hydroxyl nucleophile. Substrate binding involves a significant conformational change that sequesters the reaction complex from solvent.; PDB: 4F0R_A 4F0S_A 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A ....
Probab=99.28 E-value=8.1e-12 Score=123.63 Aligned_cols=234 Identities=16% Similarity=0.105 Sum_probs=120.1
Q ss_pred HHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccc--cceeceec------cccCCChhhHHHHHH---HHHHcCCCeE
Q 014320 132 AAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNS--CMDYGFHM------AITKWDEVVSDEMEV---MVKEKGINSF 200 (427)
Q Consensus 132 ~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~------~~~~~~~~~~~~~~~---l~~~~g~~~i 200 (427)
..+.+.|+||+.|+.. ......+.++.+++..... .+.+..+. ...+........+.+ +.+..|..
T Consensus 137 ~~~~a~GiTt~~d~~~-~~~~~~~~~~~~~~l~~~~~l~~rv~~~~~~~~vk~~~dg~~~~~~a~~~~~~~~~~~g~~-- 213 (404)
T PF07969_consen 137 MAAGAYGITTVLDYGG-GFASDPEDLEALRELAAEGGLPLRVHLYPRIGGVKIFADGSPGGRTALLEEPYYADEPGAP-- 213 (404)
T ss_dssp HHHCHTCEEEETTCEC-CCGEHHHHHHHHHHHHHCTC--SEEEEEEEEEEEEEESSSSTTHHHHHHHHHHHHHHHTSE--
T ss_pred HHhcCCCeEEecCCcc-ccCCCHHHHHHHHHHhhhcCCCeeeeeecccCceeeccccccccchhhhccccccCccccc--
Confidence 4457899999999861 1123445555555554332 22322211 111222212222222 22223321
Q ss_pred EEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHH
Q 014320 201 KFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAE 280 (427)
Q Consensus 201 k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~ 280 (427)
...++....+++.+.++++.|++.|+++.+|+.++..+....+.+++.+
T Consensus 214 ---~~~~g~~~~~~~~l~~~v~~a~~~g~~v~vHa~gd~a~~~~l~a~~~~~---------------------------- 262 (404)
T PF07969_consen 214 ---VHISGLPSFDPEELEELVRAAREAGLQVAVHAIGDRAIDEALDAIEAAR---------------------------- 262 (404)
T ss_dssp ---EEETC--SSSHHHHHHHHHHHHHCT-EEEEEEESHHHHHHHHHHHHHHT----------------------------
T ss_pred ---ccccccccccchhHHHHHHHHHhcCCeeEEEEcCCchHHhHHHHHHhhc----------------------------
Confidence 1334556678888999999999999999999988776655443332221
Q ss_pred hcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCC
Q 014320 281 FVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGI 360 (427)
Q Consensus 281 ~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~ 360 (427)
....+.|+..... +.++++++.|+. +.+.|+++...........++. .+.... ..++.+++.|+
T Consensus 263 ---~~~~i~h~~~~~~-~~~~~~~~l~~~--~~~~p~~~~~~~~~~~~~~~~~-~~~~~~---------~~~~~~~~~Gv 326 (404)
T PF07969_consen 263 ---ARGRIEHAELIDP-DDIERMAELGVT--ASVQPHFLFSWGGEWYEERLGP-ERARRI---------YPIRSLLDAGV 326 (404)
T ss_dssp ---CCHEEEEHCBCCH-HHHHHHHHHTTE--EEECCTHHHHETEETHHHHHHH-HCGGGB---------THHHHHHHCTT
T ss_pred ---ccceeeccccCCH-HHHHHHHHhCCc--cccChhHhhhccchhhhhhhhh-HHHHHH---------hHHHHHHhccC
Confidence 1115788876553 667778887754 4457765543331110000000 011111 34677999999
Q ss_pred ceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHH-H--HHhcCCCCHHHHHHHHchhhhcC
Q 014320 361 LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWD-T--MVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 361 ~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~-~--~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
.+++|||+ |...... +. ++....++...... . ....+.+|++|+++++|.|||+.
T Consensus 327 ~v~~gsD~-p~~~~~P------~~----~~~~~~~~~~~~~~~~~~~~~~~~ls~~eAl~~~T~~~A~~ 384 (404)
T PF07969_consen 327 RVALGSDA-PVSPPNP------FR----GIWAAVTRQMAGERSGPVLGPEQRLSLEEALRAYTSNPARA 384 (404)
T ss_dssp EEEE--TT-TTSSCCH------HH----HHHHHHHHHHCHHTHHHCCGGTGSSHHHHHHHHTTHHHHHH
T ss_pred ceecCcCC-cccccCc------ch----hhhhhhccccccccccccccccccCCHHHHHHHHhHHHHHH
Confidence 99999996 3321111 00 01111111110000 0 00126899999999999999974
No 117
>cd00530 PTE Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon. PTE exists as a homodimer with one active site per monomer. The active site is located next to a binuclear metal center, at the C-terminal end of a TIM alpha- beta barrel motif. The native enzyme contains two zinc ions at the active site however these can be replaced with other metals such as cobalt, cadmium, nickel or manganese and the enzyme remains active.
Probab=99.09 E-value=2.1e-08 Score=94.80 Aligned_cols=263 Identities=15% Similarity=0.082 Sum_probs=135.3
Q ss_pred cccccccccccCcCCC---------C---ChhhHHHHHHHHHcCCceEEecCcCCCC-CcHHHHHHHHHHHhccccceec
Q 014320 106 GGIDPHTHLAMEFMGS---------E---TIDDFFSGQAAALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAKNSCMDYG 172 (427)
Q Consensus 106 G~ID~H~H~~~~~~g~---------~---~~e~~~~~~~~~l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 172 (427)
|++.+|=|+...+.+. . ..+........+.++|||+++|.+.... .......+..++.+.+.+...+
T Consensus 1 g~~~~heh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvttiv~~~~~~~~~~~~~~~~~~~~~g~~v~~~~G 80 (293)
T cd00530 1 GVTLTHEHLIIDSSGFVRDPPEVDDFDLADVEAAKEELKRFRAHGGRTIVDATPPGIGRDVEKLAEVARATGVNIVAATG 80 (293)
T ss_pred CcccccCCeeecChhhccCcccccccchhhHHHHHHHHHHHHHcCCCeEEEcCCcccCcCHHHHHHHHHHhCCcEEEecc
Confidence 6778888876543211 1 1122233456678999999999875321 2333333333333334444455
Q ss_pred eeccccC---CChhhHHHHHH----HHH----HcCC--CeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCCh-
Q 014320 173 FHMAITK---WDEVVSDEMEV----MVK----EKGI--NSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG- 238 (427)
Q Consensus 173 ~~~~~~~---~~~~~~~~~~~----l~~----~~g~--~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~- 238 (427)
++..... ..+...+++.+ .+. ..++ ..++.............+.+++.++.|+++|+||++|+.+.
T Consensus 81 ~hp~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~i~~~~IGEigld~~~~~~q~~~f~~~~~lA~~~~~Pv~iH~~~~~ 160 (293)
T cd00530 81 FYKDAFYPEWVRLRSVEELTDMLIREIEEGIEGTGIKAGIIKEAGGSPAITPLEEKVLRAAARAQKETGVPISTHTQAGL 160 (293)
T ss_pred cCCCccChHHHhhCCHHHHHHHHHHHHHhccccCCcCceEEEEeecCCCCCHHHHHHHHHHHHHHHHHCCeEEEcCCCCc
Confidence 5432210 00111122221 121 1122 23433322222222345578899999999999999998542
Q ss_pred hhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccc
Q 014320 239 DAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSG 318 (427)
Q Consensus 239 ~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~ 318 (427)
.......+.+.+.|+. ..++.+.|+......+.++++.+.|..+..+.....
T Consensus 161 ~~~~~~l~~l~~~g~~----------------------------~~~~vi~H~~~~~~~~~~~~~~~~G~~i~~~~~~~~ 212 (293)
T cd00530 161 TMGLEQLRILEEEGVD----------------------------PSKVVIGHLDRNDDPDYLLKIAALGAYLEFDGIGKD 212 (293)
T ss_pred cccHHHHHHHHHcCCC----------------------------hhheEEeCCCCCCCHHHHHHHHhCCCEEEeCCCCcc
Confidence 2222222233322221 123568899632235778888888866554322110
Q ss_pred eeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCc--eEEecCCCCCChhhhhcCCCCCccCCCCCchhhHh
Q 014320 319 LVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGIL--QLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEER 396 (427)
Q Consensus 319 l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~--~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~ 396 (427)
- ....++. ....+.++++++.|.. +.++||. |+....... .+-.+....
T Consensus 213 ~-----------------~~~~~~~--~~~~~~l~~~~~~~~~d~ill~TD~-p~~~~~~~~---------~~~~~~~~~ 263 (293)
T cd00530 213 K-----------------IFGYPSD--ETRADAVKALIDEGYGDRLLLSHDV-FRKSYLEKR---------YGGHGYDYI 263 (293)
T ss_pred c-----------------ccCCCCH--HHHHHHHHHHHHCCCcCCEEEeCCc-Cchhhhhhc---------cCCCChHHH
Confidence 0 0001111 2234668889999875 5999995 553322110 111122222
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 397 MHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 397 l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+..+. ......+++.+++.++++.||+|+
T Consensus 264 ~~~~~-~~~~~~g~~~e~i~~~~~~N~~~l 292 (293)
T cd00530 264 LTRFI-PRLRERGVTEEQLDTILVENPARF 292 (293)
T ss_pred HHHHH-HHHHHcCCCHHHHHHHHHHCHHHh
Confidence 22222 334567899999999999999986
No 118
>cd01310 TatD_DNAse TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.
Probab=99.05 E-value=1.6e-08 Score=93.27 Aligned_cols=241 Identities=17% Similarity=0.110 Sum_probs=126.6
Q ss_pred ccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceecccc-CCChhhH
Q 014320 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAIT-KWDEVVS 185 (427)
Q Consensus 107 ~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 185 (427)
+||+|+|+... .. ..+.....+.+...||++++.+.... ...+.+....+...+....++++.... ...++..
T Consensus 1 ~~D~H~H~~~~--~~--~~~~~~~l~~~~~~gv~~~v~~~~~~--~~~~~~~~la~~~~~i~~~~G~hP~~~~~~~~~~~ 74 (251)
T cd01310 1 LIDTHCHLDFP--QF--DADRDDVLARAREAGVIKIIVVGTDL--KSSKRALELAKKYDNVYAAVGLHPHDADEHVDEDL 74 (251)
T ss_pred CEEeeeCCCch--hh--ccCHHHHHHHHHHcCCCEEEEeCCCH--HHHHHHHHHHHhCCCeEEEEeeCcchhhcCCHHHH
Confidence 68999998754 11 12223335566788999998775321 111222222222122222334432211 1122345
Q ss_pred HHHHHHHHHcCCCeE-EEEEecCCCcc---CCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccc
Q 014320 186 DEMEVMVKEKGINSF-KFFMAYKGSFM---INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHAL 261 (427)
Q Consensus 186 ~~~~~l~~~~g~~~i-k~~~~~~~~~~---~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~ 261 (427)
+++++.++..++.++ ++.++...... ...+.++.+++.|++.+++|.+|+.... .
T Consensus 75 ~~l~~~~~~~~~~~IGeiGld~~~~~~~~~~q~~~~~~~~~~a~e~~~pv~iH~~~~~--~------------------- 133 (251)
T cd01310 75 DLLELLAANPKVVAIGEIGLDYYRDKSPREVQKEVFRAQLELAKELNLPVVIHSRDAH--E------------------- 133 (251)
T ss_pred HHHHHHhcCCCEEEEEeeecCcCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEeeCch--H-------------------
Confidence 666666533455566 34444322211 3457789999999999999999975321 1
Q ss_pred cCCHHHHHHHHHHHHHHHHhcC-CCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEc
Q 014320 262 SRPPLLEGEATTRAIRLAEFVN-TPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMS 340 (427)
Q Consensus 262 ~~p~~~e~~a~~~~~~~~~~~g-~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~ 340 (427)
..++++++.+ .+..+.|..... .+.++++.+.|+.+.. ++....
T Consensus 134 ------------~~~~l~~~~~~~~~~i~H~~~~~-~~~~~~~~~~g~~~~~--~~~~~~-------------------- 178 (251)
T cd01310 134 ------------DVLEILKEYGPPKRGVFHCFSGS-AEEAKELLDLGFYISI--SGIVTF-------------------- 178 (251)
T ss_pred ------------HHHHHHHhcCCCCCEEEEccCCC-HHHHHHHHHcCCEEEe--eeeecc--------------------
Confidence 1123334443 334456765432 2456666667755543 321100
Q ss_pred CCCCCcccHHHHHHHHhcC--CceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHH
Q 014320 341 PPIRASGHNKALQAALATG--ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRL 418 (427)
Q Consensus 341 pplr~~~~~~~l~~~l~~G--~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~ 418 (427)
+ ....+.+.++.+ ..+.++||+ |+...... ..| .+....++.++..+....+++.+++.++
T Consensus 179 ---~---~~~~~~~~~~~~~~dril~~TD~-p~~~~~~~---------~~~-~~~~~~~~~~~~~la~~~gl~~e~~~~~ 241 (251)
T cd01310 179 ---K---NANELREVVKEIPLERLLLETDS-PYLAPVPF---------RGK-RNEPAYVKHVAEKIAELKGISVEEVAEV 241 (251)
T ss_pred ---C---CCHHHHHHHHhCChHHEEEcccC-CCCCCCCC---------CCC-CCCChhHHHHHHHHHHHHCcCHHHHHHH
Confidence 0 011234444444 367999997 65432211 011 2222334444434444578999999999
Q ss_pred HchhhhcC
Q 014320 419 TSTEWGRL 426 (427)
Q Consensus 419 ~t~npA~~ 426 (427)
++.||+|+
T Consensus 242 ~~~N~~~l 249 (251)
T cd01310 242 TTENAKRL 249 (251)
T ss_pred HHHHHHHH
Confidence 99999986
No 119
>COG1229 FwdA Formylmethanofuran dehydrogenase subunit A [Energy production and conversion]
Probab=99.00 E-value=4.5e-09 Score=97.77 Aligned_cols=64 Identities=41% Similarity=0.661 Sum_probs=52.4
Q ss_pred CccEEEECcEEEcCCC---ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccC
Q 014320 52 SSKILIKGGTVVNAHH---QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAME 117 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~---~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~ 117 (427)
+..++|+|+.|+|+-. -+.-+|.|+||||++-.+-. ....+|||+.|+++|||-+|+|+|+..+
T Consensus 2 ~~e~~IKNg~V~dPlngingE~MDI~vkdGKIVe~sev~--~~~aKVIDA~gklvm~GGvD~HsHvAG~ 68 (575)
T COG1229 2 AMEILIKNGIVYDPLNGINGEKMDICVKDGKIVEESEVS--ESKAKVIDASGKLVMPGGVDSHSHVAGA 68 (575)
T ss_pred CceEEeecCEEecCccCCCCceeeEEeecCeEeeecccc--cccceEEeccCcEEecCccccccccccc
Confidence 4568999999999875 35789999999998753321 1237899999999999999999999874
No 120
>TIGR00010 hydrolase, TatD family. Several genomes have multiple paralogs related to this family. However, a set of 17 proteins can be found, one each from 17 of the first 20 genomes, such that each member forms a bidirectional best hit across genomes with all other members of the set. This core set (and one other near-perfect member), but not the other paralogs, form the seed for this model. Additionally, members of the seed alignment and all trusted hits, but not all paralogs, have a conserved motif DxHxH near the amino end. The member from E. coli was recently shown to have DNase activity.
Probab=98.95 E-value=4.4e-08 Score=90.36 Aligned_cols=241 Identities=17% Similarity=0.151 Sum_probs=120.2
Q ss_pred ccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccccCC-ChhhH
Q 014320 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKW-DEVVS 185 (427)
Q Consensus 107 ~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 185 (427)
|||+|+|+... ... ++.....+.+...|+++++++.... .......+..+ ..++.....+++...... .++..
T Consensus 1 ~iD~H~Hl~~~--~~~--~~~~~~~~~~~~~Gv~~~v~~~~~~-~~~~~~~~~~~-~~~~i~~~~GihP~~~~~~~~~~~ 74 (252)
T TIGR00010 1 LIDAHCHLDFL--DFE--EDVEEVIERAKAAGVTAVVAVGTDL-EDFLRALELAE-KYPNVYAAVGVHPLDVDDDTKEDI 74 (252)
T ss_pred CEEeccCCCCh--hhc--cCHHHHHHHHHHcCCCEEEEecCCH-HHHHHHHHHHH-HCCCEEEEEEeCcchhhcCCHHHH
Confidence 68999998643 111 1233336667788999999764321 11111122122 222333333444211111 13344
Q ss_pred HHHHHHHHHcCCCeEEEE-EecCCCccC---CHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccc
Q 014320 186 DEMEVMVKEKGINSFKFF-MAYKGSFMI---NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHAL 261 (427)
Q Consensus 186 ~~~~~l~~~~g~~~ik~~-~~~~~~~~~---~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~ 261 (427)
+++++.++..++.+++.. +++...... ..+.++..++.|+++|++|.+|+.... ...
T Consensus 75 ~~l~~~l~~~~~~~iGEiGld~~~~~~~~~~q~~~~~~~~~~a~~~~~pv~iH~~~~~--~~~----------------- 135 (252)
T TIGR00010 75 KELERLAAHPKVVAIGETGLDYYKADEYKRRQEEVFRAQLQLAEELNLPVIIHARDAE--EDV----------------- 135 (252)
T ss_pred HHHHHHccCCCEEEEEecccCcCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEecCcc--HHH-----------------
Confidence 566665533445555432 433211111 237888889999999999999985321 011
Q ss_pred cCCHHHHHHHHHHHHHHHHhcC-CCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEc
Q 014320 262 SRPPLLEGEATTRAIRLAEFVN-TPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMS 340 (427)
Q Consensus 262 ~~p~~~e~~a~~~~~~~~~~~g-~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~ 340 (427)
+++.++.+ ....+.|..... .+.++++.+.|+.+.. +.... +
T Consensus 136 --------------~~~l~~~~~~~~~i~H~~~~~-~~~~~~~~~~g~~~~~--~~~~~-~------------------- 178 (252)
T TIGR00010 136 --------------LDILREEKPKVGGVLHCFTGD-AELAKKLLDLGFYISI--SGIVT-F------------------- 178 (252)
T ss_pred --------------HHHHHhcCCCCCEEEEccCCC-HHHHHHHHHCCCeEee--ceeEe-c-------------------
Confidence 11121221 123356765433 3667777777765543 32100 0
Q ss_pred CCCCCcccHHHHHHHHhcC--CceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHH
Q 014320 341 PPIRASGHNKALQAALATG--ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRL 418 (427)
Q Consensus 341 pplr~~~~~~~l~~~l~~G--~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~ 418 (427)
+ +.+.+.+.++.. ..+.++||. |+....+ + .|...-...++..........+++.+++.++
T Consensus 179 ---~---~~~~~~~~i~~~~~dril~~TD~-p~~~~~~------~----~~~~~~p~~i~~~~~~~a~~~g~~~~~~~~~ 241 (252)
T TIGR00010 179 ---K---NAKSLREVVRKIPLERLLVETDS-PYLAPVP------Y----RGKRNEPAFVRYTVEAIAEIKGMDVEELAQI 241 (252)
T ss_pred ---C---CcHHHHHHHHhCCHHHeEecccC-CCCCCCC------C----CCCCCCChhHHHHHHHHHHHhCcCHHHHHHH
Confidence 0 012234445443 478999996 5421110 0 0111111123322222222358999999999
Q ss_pred HchhhhcC
Q 014320 419 TSTEWGRL 426 (427)
Q Consensus 419 ~t~npA~~ 426 (427)
++.||+|+
T Consensus 242 ~~~N~~~~ 249 (252)
T TIGR00010 242 TTKNAKRL 249 (252)
T ss_pred HHHHHHHH
Confidence 99999985
No 121
>PRK10812 putative DNAse; Provisional
Probab=98.83 E-value=3.3e-07 Score=84.69 Aligned_cols=245 Identities=17% Similarity=0.144 Sum_probs=130.8
Q ss_pred ccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccccCCChhhHH
Q 014320 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSD 186 (427)
Q Consensus 107 ~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (427)
+||+|+|+...... ...++.......+...||..++..+.... .....+ .+.+..+..+..+|+|..... .+..++
T Consensus 3 ~iDtH~Hl~~~~~~-~~~~d~~~vl~~a~~~gv~~~~~~~~~~~-~~~~~~-~l~~~~~~v~~~~GiHP~~~~-~~~~~~ 78 (265)
T PRK10812 3 LVDSHCHLDGLDYQ-SLHKDVDDVLAKAAARDVKFCLAVATTLP-GYRHMR-DLVGERDNVVFSCGVHPLNQD-EPYDVE 78 (265)
T ss_pred eEEeccCCCCccch-hhhcCHHHHHHHHHHcCCCEEEEeCCCHH-HHHHHH-HHHhhCCCeEEEEEeCCCCCC-ChhHHH
Confidence 79999999742000 01223334466777889988876432111 111111 122222334445666653322 233456
Q ss_pred HHHHHHHHcCCCeE-EEEEecCCC---ccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCccccccc
Q 014320 187 EMEVMVKEKGINSF-KFFMAYKGS---FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALS 262 (427)
Q Consensus 187 ~~~~l~~~~g~~~i-k~~~~~~~~---~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~ 262 (427)
.+.+++....+..| .+.+++... .....+.+++.++.|+++++|+.+|+.+.. ....+.+.+.+.
T Consensus 79 ~l~~~~~~~~vvaIGEiGLD~~~~~~~~~~Q~~vf~~ql~lA~e~~~Pv~iH~r~a~--~~~l~iL~~~~~--------- 147 (265)
T PRK10812 79 ELRRLAAEEGVVAMGETGLDYYYTPETKVRQQESFRHHIQIGRELNKPVIVHTRDAR--ADTLAILREEKV--------- 147 (265)
T ss_pred HHHHHhcCCCEEEEEeeecCcCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEeeCch--HHHHHHHHhhcC---------
Confidence 66666633345556 455665311 112345788999999999999999974421 122222221111
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCC
Q 014320 263 RPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPP 342 (427)
Q Consensus 263 ~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pp 342 (427)
...+. +.|+.+.+ .+.++.+.+.|..+...... .
T Consensus 148 -------------------~~~~~-v~H~fsG~-~~~a~~~~~~G~~is~~g~~---t---------------------- 181 (265)
T PRK10812 148 -------------------TDCGG-VLHCFTED-RETAGKLLDLGFYISFSGIV---T---------------------- 181 (265)
T ss_pred -------------------CCCCE-EEEeecCC-HHHHHHHHHCCCEEEECeee---e----------------------
Confidence 01122 57886544 57788888888655542111 0
Q ss_pred CCCcccHHHHHHHHhcC--CceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHc
Q 014320 343 IRASGHNKALQAALATG--ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTS 420 (427)
Q Consensus 343 lr~~~~~~~l~~~l~~G--~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t 420 (427)
. ...+.+++.++.+ ..+.+.||. |+...... .|-.+.-..++.......+-.+++.+++.+.++
T Consensus 182 ~---~~~~~~~~~~~~ipldrlLlETD~-P~~~p~~~----------~g~~n~P~~i~~v~~~ia~l~g~~~eei~~~~~ 247 (265)
T PRK10812 182 F---RNAEQLRDAARYVPLDRLLVETDS-PYLAPVPH----------RGKENQPAMVRDVAEYMAVLKGVSVEELAQVTT 247 (265)
T ss_pred c---CccHHHHHHHHhCChhhEEEecCC-CCCCCcCC----------CCCCCCcHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 0 1123456666655 468899995 76432111 121122223444333333446799999999999
Q ss_pred hhhhcC
Q 014320 421 TEWGRL 426 (427)
Q Consensus 421 ~npA~~ 426 (427)
.|+.++
T Consensus 248 ~N~~~l 253 (265)
T PRK10812 248 DNFARL 253 (265)
T ss_pred HHHHHH
Confidence 999874
No 122
>PRK09875 putative hydrolase; Provisional
Probab=98.82 E-value=1.1e-06 Score=81.91 Aligned_cols=258 Identities=15% Similarity=0.111 Sum_probs=135.6
Q ss_pred cccccccccccCcCCCC--------ChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHH-HHhccccceeceecc
Q 014320 106 GGIDPHTHLAMEFMGSE--------TIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYE-KKAKNSCMDYGFHMA 176 (427)
Q Consensus 106 G~ID~H~H~~~~~~g~~--------~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 176 (427)
|+..+|=|+...+.+.. ..+......+...+.|+.|++|+...........+++.. +.+-+....-+++..
T Consensus 7 G~tl~HEHl~~~~~~~~~~~~~~l~~~~~~~~el~~~~~~Gg~tiVd~T~~g~GRd~~~l~~is~~tgv~Iv~~TG~y~~ 86 (292)
T PRK09875 7 GYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQD 86 (292)
T ss_pred CcceecCCeEecChhhcCCcccccccHHHHHHHHHHHHHhCCCeEEecCCCccCcCHHHHHHHHHHhCCcEEEcCcCCCC
Confidence 88889999865422211 122233344556778999999986443332223333332 222222223333321
Q ss_pred c------cCCC-hhhHHHHHHHHHHcCC-------CeE-EEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhH
Q 014320 177 I------TKWD-EVVSDEMEVMVKEKGI-------NSF-KFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAV 241 (427)
Q Consensus 177 ~------~~~~-~~~~~~~~~l~~~~g~-------~~i-k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~ 241 (427)
. .... ++..+.+.+.+ ..|. ..| |+..++........+.+++..+.+++.|.++.+|.......
T Consensus 87 ~~~p~~~~~~~~e~la~~~i~ei-~~Gi~gt~ikaGvIGeiG~~~~~it~~E~kvl~Aaa~a~~~TG~pi~~Ht~~~~~g 165 (292)
T PRK09875 87 AFFPEHVATRSVQELAQEMVDEI-EQGIDGTELKAGIIAEIGSSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTMG 165 (292)
T ss_pred ccCCHHHhcCCHHHHHHHHHHHH-HHhhccCCCcccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHCCcEEEcCCCccch
Confidence 1 0111 11112222222 1222 335 44333321122234567788888899999999996433222
Q ss_pred HHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceee
Q 014320 242 FEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVL 321 (427)
Q Consensus 242 ~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~ 321 (427)
.+.++.+.+.|+. -.++.+.|+......+.++++.+.|+.+-.++.-
T Consensus 166 ~e~l~il~e~Gvd----------------------------~~rvvi~H~d~~~d~~~~~~l~~~G~~l~fD~~g----- 212 (292)
T PRK09875 166 LEQLALLQAHGVD----------------------------LSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIG----- 212 (292)
T ss_pred HHHHHHHHHcCcC----------------------------cceEEEeCCCCCCCHHHHHHHHHcCCEEEeccCC-----
Confidence 2222333333321 1268899997655567788888899766654220
Q ss_pred CcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcC--CceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHH
Q 014320 322 DDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATG--ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHL 399 (427)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G--~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~ 399 (427)
. ..+ .|. ....+.+..+++.| ..+.+++|-..... +.. .|-.|....+..
T Consensus 213 -~-----------~~~---~pd--~~r~~~i~~L~~~Gy~drilLS~D~~~~~~----------~~~-~gg~G~~~i~~~ 264 (292)
T PRK09875 213 -K-----------NSY---YPD--EKRIAMLHALRDRGLLNRVMLSMDITRRSH----------LKA-NGGYGYDYLLTT 264 (292)
T ss_pred -C-----------ccc---CCH--HHHHHHHHHHHhcCCCCeEEEeCCCCCccc----------ccc-cCCCChhHHHHH
Confidence 0 000 121 12245667777887 46888999643221 111 232455555554
Q ss_pred HHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 400 VWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 400 ~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+...+. +.+++-+++=+++..||+|+
T Consensus 265 ~ip~L~-~~Gvse~~I~~m~~~NP~r~ 290 (292)
T PRK09875 265 FIPQLR-QSGFSQADVDVMLRENPSQF 290 (292)
T ss_pred HHHHHH-HcCCCHHHHHHHHHHCHHHH
Confidence 443333 45799999999999999985
No 123
>PF12890 DHOase: Dihydro-orotase-like; InterPro: IPR024403 This entry represents a small family of dihydro-orotase-like proteins from bacteria.
Probab=98.81 E-value=1.1e-08 Score=80.66 Aligned_cols=136 Identities=22% Similarity=0.281 Sum_probs=88.2
Q ss_pred CCEEeccccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccccC
Q 014320 100 GKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITK 179 (427)
Q Consensus 100 g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (427)
|++++|||||.|+|+..+ |...++.... |+..|++..+.+ .++..+
T Consensus 1 ~kli~~g~vd~hVhlrep--g~~~keti~t-----------T~~ampnt~paP------------------a~itv~--- 46 (142)
T PF12890_consen 1 GKLILPGLVDVHVHLREP--GFEAKETIET-----------TWCAMPNTFPAP------------------AGITVE--- 46 (142)
T ss_pred Cceeehhhhhhhhhhhcc--cchhhhhhhc-----------eeeecCccCCCC------------------cceeee---
Confidence 689999999999999998 7666655432 666665443322 001000
Q ss_pred CChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHH----HHHHHcCCCC
Q 014320 180 WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQ----KRMIELGITG 255 (427)
Q Consensus 180 ~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~----~~l~~~G~~~ 255 (427)
..|-..+ .++..+........+.+.++. .+.+..+..|||+++.+.... +.-..+|+
T Consensus 47 --------------~~~~e~~--afsddg~giq~~~lm~eamk~-a~l~~~i~ahceDd~l~~~g~v~~ge~~q~~g~-- 107 (142)
T PF12890_consen 47 --------------DDGEEAF--AFSDDGYGIQIQLLMYEAMKK-AELDQEIVAHCEDDELTNGGVVHDGELPQFLGV-- 107 (142)
T ss_pred --------------ecCcceE--EEecCCceeeeHHHHHHHHHH-HHcccHHHHhhcccccccccccccchhhHHhCC--
Confidence 0111111 223333444567778888888 789999999999886543322 23334442
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCH
Q 014320 256 PEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM 294 (427)
Q Consensus 256 ~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~ 294 (427)
-.+..+|...+.+.+-+++..|+..|+||+++.
T Consensus 108 ------~L~G~cEs~~~~rd~lLak~~g~~yhVchvstk 140 (142)
T PF12890_consen 108 ------YLKGNCESVQCARDVLLAKATGCHYHVCHVSTK 140 (142)
T ss_pred ------cCCCcchHHHHHHHHHhhhccCCcEEEEEEecc
Confidence 123356888999999999999999999999764
No 124
>cd01320 ADA Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively. ADA plays an important role in the purine pathway. Low, as well as high levels of ADA activity have been linked to several diseases.
Probab=98.78 E-value=7.7e-07 Score=85.39 Aligned_cols=138 Identities=14% Similarity=0.135 Sum_probs=81.2
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEc
Q 014320 212 INDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVH 290 (427)
Q Consensus 212 ~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H 290 (427)
.+.+.+..+++.|+++|+++++|+ |+. ......+.++.. |. ..+.|
T Consensus 170 ~~~~~~~~~~~~A~~~g~~v~~H~~E~~-~~~~~~~a~~~~-------------------------------g~-~~i~H 216 (325)
T cd01320 170 FPPEKFVRAFQRAREAGLRLTAHAGEAG-GPESVRDALDLL-------------------------------GA-ERIGH 216 (325)
T ss_pred CCHHHHHHHHHHHHHCCCceEEeCCCCC-CHHHHHHHHHHc-------------------------------CC-cccch
Confidence 478999999999999999999997 442 111111111112 21 13667
Q ss_pred CCCHH-HHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCC
Q 014320 291 VMSMD-AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHC 369 (427)
Q Consensus 291 ~~~~~-~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~ 369 (427)
+.... .-+.++.+++.|+.+.. ||......... .....+| ++++++.|+.+++|||..
T Consensus 217 ~~~l~~~~~~~~~l~~~gi~v~~--~P~sn~~l~~~----------~~~~~~p---------~~~l~~~Gv~v~lgTD~~ 275 (325)
T cd01320 217 GIRAIEDPELVKRLAERNIPLEV--CPTSNVQTGAV----------KSLAEHP---------LRELLDAGVKVTINTDDP 275 (325)
T ss_pred hhccCccHHHHHHHHHcCCeEEE--CCCcccccccc----------CCcccCh---------HHHHHHCCCEEEECCCCC
Confidence 66542 12578889999976665 77532211100 0001244 566999999999999974
Q ss_pred CCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhc
Q 014320 370 AFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGR 425 (427)
Q Consensus 370 p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~ 425 (427)
++.. .. +...+...+...++++.++.+ ++.|+++
T Consensus 276 ~~~~-~~--------------------~~~e~~~~~~~~~l~~~el~~-~~~na~~ 309 (325)
T cd01320 276 TVFG-TY--------------------LTDEYELLAEAFGLTEEELKK-LARNAVE 309 (325)
T ss_pred cccC-CC--------------------HHHHHHHHHHHcCCCHHHHHH-HHHHHHH
Confidence 3221 11 111121233445799999555 7788875
No 125
>TIGR01430 aden_deam adenosine deaminase. This family includes the experimentally verified adenosine deaminases of mammals and E. coli. Other members of this family are predicted also to be adenosine deaminase, an enzyme of nucleotide degradation. This family is distantly related to AMP deaminase.
Probab=98.78 E-value=8.7e-07 Score=84.93 Aligned_cols=139 Identities=12% Similarity=0.104 Sum_probs=83.3
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEE
Q 014320 211 MINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV 289 (427)
Q Consensus 211 ~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~ 289 (427)
..+.+.+..+++.|+++|+++++|+ |... .......+++ .|+. .+.
T Consensus 168 ~~~~~~~~~~~~~A~~~g~~i~~Ha~E~~~-~~~~~~~~~~-------------------------------~g~~-ri~ 214 (324)
T TIGR01430 168 GGPPPDFVRAFAIARELGLHLTVHAGELGG-PESVREALDD-------------------------------LGAT-RIG 214 (324)
T ss_pred CCCHHHHHHHHHHHHHCCCCeEEecCCCCC-hHHHHHHHHH-------------------------------cCch-hcc
Confidence 4568899999999999999999998 5421 1111111111 2222 366
Q ss_pred cCCCHH-HHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCC
Q 014320 290 HVMSMD-AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDH 368 (427)
Q Consensus 290 H~~~~~-~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~ 368 (427)
|..... .-+.++.++++|+.+.+ ||......... .. ...+| +.++++.|+.++||||.
T Consensus 215 Hg~~l~~~~~~i~~l~~~gi~v~~--cP~Sn~~l~~~---------~~-~~~~p---------i~~l~~~Gv~v~igTD~ 273 (324)
T TIGR01430 215 HGVRALEDPELLKRLAQENITLEV--CPTSNVALGVV---------KS-LAEHP---------LRRFLEAGVKVTLNSDD 273 (324)
T ss_pred hhhhhccCHHHHHHHHHcCceEEE--CCccccccccc---------CC-cccCh---------HHHHHHCCCEEEECCCC
Confidence 766541 13678889999976665 77633221100 00 01234 56699999999999997
Q ss_pred CCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhc
Q 014320 369 CAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGR 425 (427)
Q Consensus 369 ~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~ 425 (427)
...... . +.--+...++..++++.+ ++.+|.|+++
T Consensus 274 ~~~~~~-~--------------------l~~e~~~a~~~~~l~~~e-l~~~~~na~~ 308 (324)
T TIGR01430 274 PAYFGS-Y--------------------LTEEYEIAAKHAGLTEEE-LKQLARNALE 308 (324)
T ss_pred CcccCC-C--------------------HHHHHHHHHHHcCCCHHH-HHHHHHHHHH
Confidence 432211 1 111122234456899999 7788999875
No 126
>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair]
Probab=98.60 E-value=5.9e-06 Score=75.27 Aligned_cols=242 Identities=18% Similarity=0.118 Sum_probs=134.0
Q ss_pred cccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceecccc-CCChhh
Q 014320 106 GGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAIT-KWDEVV 184 (427)
Q Consensus 106 G~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 184 (427)
-|||+|+|+... ...++...-...+...||+-+...+.... .....-.+.+..++.+..+|+|.... ...++.
T Consensus 2 ~liDtH~HL~~~----~~~~d~~~vi~~a~~~gv~~~~~~g~~~~--~~~~~~~la~~y~~v~~~~G~HP~~~~~~~~~~ 75 (256)
T COG0084 2 MLIDTHCHLDFE----EFDEDRDEVIARAREAGVKKMVVVGTDLE--DFKRALELAEKYPNVYAAVGVHPLDADEHSEED 75 (256)
T ss_pred ccEEeeeCCCch----hhcCCHHHHHHHHHHcCCcEEEEeecCHH--HHHHHHHHHHhCCCeEEEEeeCCCccccccHHH
Confidence 379999999853 12233333456678889998886543211 11222222233345566667665441 123566
Q ss_pred HHHHHHHHHH-cCCCeEEE-EEecCCCccC----CHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCccc
Q 014320 185 SDEMEVMVKE-KGINSFKF-FMAYKGSFMI----NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEG 258 (427)
Q Consensus 185 ~~~~~~l~~~-~g~~~ik~-~~~~~~~~~~----~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~ 258 (427)
++.+.+++.. ..+..|.. .+++.-.... -.+.+++.++.|+++++|+.+|+-+.. +
T Consensus 76 ~~~l~~~~~~~~~vvaIGEiGLDy~~~~~~~~~~Q~~~F~~ql~lA~~~~lPviIH~R~A~--~---------------- 137 (256)
T COG0084 76 LEELEQLAEHHPKVVAIGEIGLDYYWDKEPDKERQEEVFEAQLELAKELNLPVIIHTRDAH--E---------------- 137 (256)
T ss_pred HHHHHHHHhcCCCeEEEEecccCccccccccHHHHHHHHHHHHHHHHHcCCCEEEEccccH--H----------------
Confidence 7778887742 45555543 3444322211 346788999999999999999985421 1
Q ss_pred ccccCCHHHHHHHHHHHHHHHHhcC-CCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCcee
Q 014320 259 HALSRPPLLEGEATTRAIRLAEFVN-TPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKY 337 (427)
Q Consensus 259 ~~~~~p~~~e~~a~~~~~~~~~~~g-~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~ 337 (427)
..++..++.+ ..--+.|+.+.+ .+..+++-+.|..+....+. .+
T Consensus 138 ---------------d~~~iL~~~~~~~~gi~HcFsGs-~e~a~~~~d~G~yisisG~i---tf---------------- 182 (256)
T COG0084 138 ---------------DTLEILKEEGAPVGGVLHCFSGS-AEEARKLLDLGFYISISGIV---TF---------------- 182 (256)
T ss_pred ---------------HHHHHHHhcCCCCCEEEEccCCC-HHHHHHHHHcCeEEEECcee---ec----------------
Confidence 1122222222 123488987765 58888888888555431111 00
Q ss_pred EEcCCCCCcccHHHHHHHHhc--CCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHH
Q 014320 338 VMSPPIRASGHNKALQAALAT--GILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDY 415 (427)
Q Consensus 338 ~~~pplr~~~~~~~l~~~l~~--G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~ 415 (427)
+. .+.+++.++. =....+=||. |+..... ..|-.+.....+.......+-.+++++++
T Consensus 183 ------k~---a~~~~ev~~~iPldrLL~ETDs-Pyl~P~p----------~rGkrNeP~~v~~v~~~iAelk~~~~eev 242 (256)
T COG0084 183 ------KN---AEKLREVARELPLDRLLLETDA-PYLAPVP----------YRGKRNEPAYVRHVAEKLAELKGISAEEV 242 (256)
T ss_pred ------CC---cHHHHHHHHhCCHhHeEeccCC-CCCCCcC----------CCCCCCCchHHHHHHHHHHHHhCCCHHHH
Confidence 00 0112222221 1236777995 7764321 12222233344444444445568999999
Q ss_pred HHHHchhhhcC
Q 014320 416 VRLTSTEWGRL 426 (427)
Q Consensus 416 v~~~t~npA~~ 426 (427)
.+.+|.|.-++
T Consensus 243 a~~t~~N~~~l 253 (256)
T COG0084 243 AEITTENAKRL 253 (256)
T ss_pred HHHHHHHHHHH
Confidence 99999997654
No 127
>PRK11449 putative deoxyribonuclease YjjV; Provisional
Probab=98.51 E-value=1.6e-05 Score=73.23 Aligned_cols=244 Identities=16% Similarity=0.112 Sum_probs=127.6
Q ss_pred eccccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceecccc-CCCh
Q 014320 104 MPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAIT-KWDE 182 (427)
Q Consensus 104 ~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 182 (427)
.+.+||+|+|+... . ..++.......+...||+.++.++.... .....+ .+.+..+.....+|+|.... ...+
T Consensus 2 ~~~~iD~HcHl~~~--~--~~~~~~~~l~~a~~~gv~~~~~~~~~~~-~~~~~~-~l~~~~~~v~~~~GiHP~~~~~~~~ 75 (258)
T PRK11449 2 ICRFIDTHCHFDFP--P--FSGDEEASLQRAAQAGVGKIIVPATEAE-NFARVL-ALAERYQPLYAALGLHPGMLEKHSD 75 (258)
T ss_pred CceEEEeccCCCCh--h--hccCHHHHHHHHHHCCCCEEEEeeCCHH-HHHHHH-HHHHhCCCEEEEEeeCcCccccCCH
Confidence 35589999998653 1 1122333355667889999886543111 122222 22222233444566665332 2234
Q ss_pred hhHHHHHHHHHHc--CCCeEE-EEEecCCCc---cCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCc
Q 014320 183 VVSDEMEVMVKEK--GINSFK-FFMAYKGSF---MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGP 256 (427)
Q Consensus 183 ~~~~~~~~l~~~~--g~~~ik-~~~~~~~~~---~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~ 256 (427)
+..+.+.+++... .+..|. +.+++.... ....+.+.+.++.|+++++||.+|+.+.. ....+
T Consensus 76 ~~~~~l~~~l~~~~~~~~aIGEiGLD~~~~~~~~~~Q~~vf~~ql~lA~~~~~Pv~iH~r~a~--~~~~~---------- 143 (258)
T PRK11449 76 VSLDQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRRTH--DKLAM---------- 143 (258)
T ss_pred HHHHHHHHHHHhCCCCEEEEEecccCCCCCCCCHHHHHHHHHHHHHHHHHhCCCEEEEecCcc--HHHHH----------
Confidence 4556666655322 233442 334432111 11346788999999999999999985421 11111
Q ss_pred ccccccCCHHHHHHHHHHHHHHHHhcCCC-EEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCc
Q 014320 257 EGHALSRPPLLEGEATTRAIRLAEFVNTP-LYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAA 335 (427)
Q Consensus 257 ~~~~~~~p~~~e~~a~~~~~~~~~~~g~~-~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~ 335 (427)
+.+..+.+ -.+.|..+.. .+..+.+.+.|..+.. .+. +.+
T Consensus 144 ---------------------il~~~~~~~~~i~H~fsG~-~~~a~~~l~~G~~iS~--~g~-it~-------------- 184 (258)
T PRK11449 144 ---------------------HLKRHDLPRTGVVHGFSGS-LQQAERFVQLGYKIGV--GGT-ITY-------------- 184 (258)
T ss_pred ---------------------HHHhcCCCCCeEEEcCCCC-HHHHHHHHHCCCEEEe--Ccc-ccc--------------
Confidence 11122211 1377886655 5778888888854432 110 000
Q ss_pred eeEEcCCCCCcccHHHHHHHHhc--CCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHH
Q 014320 336 KYVMSPPIRASGHNKALQAALAT--GILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVT 413 (427)
Q Consensus 336 ~~~~~pplr~~~~~~~l~~~l~~--G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~ 413 (427)
+ + .+.+++.++. -..+.+.||. |+-+... ..|-.+.-..++..+....+-.+++.+
T Consensus 185 -----~--~----~~~~~~~~~~ipldriL~ETD~-P~l~p~~----------~~~~~n~p~~~~~~~~~ia~l~~~~~~ 242 (258)
T PRK11449 185 -----P--R----ASKTRDVIAKLPLASLLLETDA-PDMPLNG----------FQGQPNRPEQAARVFDVLCELRPEPAD 242 (258)
T ss_pred -----c--C----cHHHHHHHHhCChhhEEEecCC-CCCCCCC----------CCCCCCCChHHHHHHHHHHHHHCcCHH
Confidence 0 0 1123333321 1247899995 7642111 112223334555555444455679999
Q ss_pred HHHHHHchhhhcC
Q 014320 414 DYVRLTSTEWGRL 426 (427)
Q Consensus 414 ~~v~~~t~npA~~ 426 (427)
++.+.++.|..++
T Consensus 243 el~~~~~~N~~~l 255 (258)
T PRK11449 243 EIAEVLLNNTYTL 255 (258)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998764
No 128
>PRK10425 DNase TatD; Provisional
Probab=98.50 E-value=1.3e-05 Score=73.73 Aligned_cols=248 Identities=11% Similarity=0.062 Sum_probs=127.8
Q ss_pred ccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceecccc-CCChhhH
Q 014320 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAIT-KWDEVVS 185 (427)
Q Consensus 107 ~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 185 (427)
|||+|+|+... . . .++...-...+...||..++..+.... ...+ .....+..+.....+|+|.... ...++.+
T Consensus 1 ~iDtH~HL~~~--~-~-~~d~~~vl~~a~~~gv~~~i~~~~~~~-~~~~-~~~l~~~~~~v~~~~GiHP~~~~~~~~~~~ 74 (258)
T PRK10425 1 MFDIGVNLTSS--Q-F-AKDRDDVVARAFAAGVNGMLITGTNLR-ESQQ-AQKLARQYPSCWSTAGVHPHDSSQWQAATE 74 (258)
T ss_pred CEEeeeCcCCh--h-h-hccHHHHHHHHHHCCCCEEEEeCCCHH-HHHH-HHHHHHhCCCEEEEEEeCcCccccCCHHHH
Confidence 68999998643 1 1 133434466677889988876543211 1122 2222222233444566665332 2234455
Q ss_pred HHHHHHHHHcCCCeEE-EEEecCCCc---cCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccc
Q 014320 186 DEMEVMVKEKGINSFK-FFMAYKGSF---MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHAL 261 (427)
Q Consensus 186 ~~~~~l~~~~g~~~ik-~~~~~~~~~---~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~ 261 (427)
+.+.++.+...+..|. +.+++.... ..-.+.+++.++.|+++++|+.+|+-+.. +...+.+.+.
T Consensus 75 ~~l~~~~~~~~~vaIGEiGLDy~~~~~~~~~Q~~vF~~ql~lA~~~~~Pv~iH~r~a~--~~~l~iL~~~---------- 142 (258)
T PRK10425 75 EAIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLAIAAELNMPVFMHCRDAH--ERFMALLEPW---------- 142 (258)
T ss_pred HHHHHhccCCCEEEEeeeeeccccCCCCHHHHHHHHHHHHHHHHHhCCCeEEEEeCch--HHHHHHHHHh----------
Confidence 6666655323333443 445543111 11135688899999999999999975321 1111111110
Q ss_pred cCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcC
Q 014320 262 SRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSP 341 (427)
Q Consensus 262 ~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~p 341 (427)
. ...+-.+.|+.+.. .+.++++.+.|..+...... .+ .
T Consensus 143 -----------------~--~~~~~~i~H~fsG~-~~~~~~~l~~G~~~si~g~i--~~--------------------~ 180 (258)
T PRK10425 143 -----------------L--DKLPGAVLHCFTGT-REEMQACLARGLYIGITGWV--CD--------------------E 180 (258)
T ss_pred -----------------c--cCCCCeEEEecCCC-HHHHHHHHHCCCEEEECcee--ec--------------------c
Confidence 0 01111367987665 47788888888655541111 00 0
Q ss_pred CCCCcccHHHHHHHHhc--CCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHH
Q 014320 342 PIRASGHNKALQAALAT--GILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLT 419 (427)
Q Consensus 342 plr~~~~~~~l~~~l~~--G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~ 419 (427)
.....++++++. =..+.+-||. |+..... +...+.|-.+....++.....+.+-.+++.+++.+.+
T Consensus 181 -----~~~~~~~~~~~~ipldrlLlETDa-P~l~P~~------~~~~~~~~~n~P~~i~~v~~~iA~l~~~~~~~v~~~~ 248 (258)
T PRK10425 181 -----RRGLELRELLPLIPAERLLLETDA-PYLLPRD------LTPKPASRRNEPAFLPHILQRIAHWRGEDAAWLAATT 248 (258)
T ss_pred -----cccHHHHHHHHhCChHHEEEeccC-CCCCCCC------cCCCCCCCCCCcHHHHHHHHHHHHHHCcCHHHHHHHH
Confidence 001123333321 1247788994 7643211 1111123333344555555455556779999999999
Q ss_pred chhhhcC
Q 014320 420 STEWGRL 426 (427)
Q Consensus 420 t~npA~~ 426 (427)
+.|.-++
T Consensus 249 ~~N~~~l 255 (258)
T PRK10425 249 DANARTL 255 (258)
T ss_pred HHHHHHH
Confidence 9997653
No 129
>PF01026 TatD_DNase: TatD related DNase The Pfam entry finds members not in the Prosite definition.; InterPro: IPR001130 This family of proteins are related to a large superfamily of metalloenzymes []. TatD, a member of this family has been shown experimentally to be a DNase enzyme []. Allantoinase 3.5.2.5 from EC, N-isopropylammelide isopropyl amidohydrolase 3.5.1 from EC and the SCN1 protein from fission yeast belong to this family.; GO: 0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters; PDB: 3E2V_B 1XWY_A 3GUW_D 3RCM_A 1ZZM_A 2XIO_A 1J6O_A 2GZX_A 3IPW_A 2Y1H_A ....
Probab=98.49 E-value=4.5e-06 Score=77.08 Aligned_cols=242 Identities=16% Similarity=0.110 Sum_probs=125.2
Q ss_pred cccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhc-cccceeceeccccCC-ChhhH
Q 014320 108 IDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK-NSCMDYGFHMAITKW-DEVVS 185 (427)
Q Consensus 108 ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~ 185 (427)
||+|+|+... . ..++.......+...|++.++...... .............+ .....+|+|...... .++..
T Consensus 1 iD~H~Hl~~~--~--~~~~~~~~~~~~~~~g~~~~i~~~~~~--~~~~~~~~~~~~~~~~v~~~~GiHP~~~~~~~~~~~ 74 (255)
T PF01026_consen 1 IDAHCHLDSP--R--FEEDRPEVLERAREAGVSAIIIVSTDP--EDWERVLELASQYPDRVYPALGIHPWEAHEVNEEDL 74 (255)
T ss_dssp EEEEE-TTSG--G--GTTTHHHHHHHHHHTTEEEEEEEESSH--HHHHHHHHHHHHTTTEEEEEE---GGGGGGHSHHHH
T ss_pred CcCccCCCCh--h--hCcCHHHHHHHHHHcCCCEEEEcCCCH--HHhHHHHHHHhcCCCeEEEEecCCcchhhhhhHHHH
Confidence 7999998763 1 122344446778889999997654322 11122222222222 255566776543322 34455
Q ss_pred HHHHHH--HHHcCCCeE-EEEEecCCCc----cCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCccc
Q 014320 186 DEMEVM--VKEKGINSF-KFFMAYKGSF----MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEG 258 (427)
Q Consensus 186 ~~~~~l--~~~~g~~~i-k~~~~~~~~~----~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~ 258 (427)
+.+.++ .....+.+| .+.+++.... ....+.+++.++.|+++++|+.+|+.+. ...
T Consensus 75 ~~l~~l~~~~~~~~~aIGEiGLD~~~~~~~~~~~Q~~vF~~ql~lA~~~~~pv~iH~r~a--~~~--------------- 137 (255)
T PF01026_consen 75 EELEELINLNRPKVVAIGEIGLDYYWRNEEDKEVQEEVFERQLELAKELNLPVSIHCRKA--HEE--------------- 137 (255)
T ss_dssp HHHHHHHHHTSTTEEEEEEEEEETTTTSSSGHHHHHHHHHHHHHHHHHHTCEEEEEEESH--HHH---------------
T ss_pred HHHHHHHHhccccceeeeeeccCcccccCCcHHHHHHHHHHHHHHHHHhCCcEEEecCCc--HHH---------------
Confidence 667776 323445555 3456652111 1124678899999999999999998652 112
Q ss_pred ccccCCHHHHHHHHHHHHHHHHhcCCC--EEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCce
Q 014320 259 HALSRPPLLEGEATTRAIRLAEFVNTP--LYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAK 336 (427)
Q Consensus 259 ~~~~~p~~~e~~a~~~~~~~~~~~g~~--~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~ 336 (427)
.++..++.+.+ ..+.|..+.. .+.++++.+.|..+....... +
T Consensus 138 ----------------~l~il~~~~~~~~~~i~H~f~g~-~~~~~~~~~~g~~~S~~~~~~--~---------------- 182 (255)
T PF01026_consen 138 ----------------LLEILKEYGPPNLRVIFHCFSGS-PEEAKKFLDLGCYFSFSGAIT--F---------------- 182 (255)
T ss_dssp ----------------HHHHHHHTTGGTSEEEETT--S--HHHHHHHHHTTEEEEEEGGGG--S----------------
T ss_pred ----------------HHHHHHhccccceeEEEecCCCC-HHHHHHHHhcCceEEeccccc--c----------------
Confidence 22333333311 4588986655 466777777775443311110 0
Q ss_pred eEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHH
Q 014320 337 YVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYV 416 (427)
Q Consensus 337 ~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v 416 (427)
.+.+..++.+ +.+ ....+.+-||. |+....+. .|-......++..+..+.+-.+++++++.
T Consensus 183 ------~~~~~~~~~~-~~i-p~drillETD~-P~~~~~~~----------~~~~~~p~~i~~~~~~la~~~~~~~e~~~ 243 (255)
T PF01026_consen 183 ------KNSKKVRELI-KAI-PLDRILLETDA-PYLAPDPY----------RGKPNEPSNIPKVAQALAEIKGISLEELA 243 (255)
T ss_dssp ------TTSHHHHHHH-HHS--GGGEEEE-BT-TSSECTTS----------TTSE--GGGHHHHHHHHHHHHTSTHHHHH
T ss_pred ------cccHHHHHHH-hcC-ChhhEEEcCCC-CcCCcccc----------CCCCCChHHHHHHHHHHHHHcCCCHHHHH
Confidence 0011112222 222 13468899994 66432111 12233333455555455555679999999
Q ss_pred HHHchhhhcC
Q 014320 417 RLTSTEWGRL 426 (427)
Q Consensus 417 ~~~t~npA~~ 426 (427)
+.+..|..|+
T Consensus 244 ~~~~~N~~r~ 253 (255)
T PF01026_consen 244 QIIYENAKRL 253 (255)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 130
>PRK09358 adenosine deaminase; Provisional
Probab=98.47 E-value=2.2e-05 Score=75.80 Aligned_cols=107 Identities=17% Similarity=0.134 Sum_probs=64.8
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEE
Q 014320 211 MINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV 289 (427)
Q Consensus 211 ~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~ 289 (427)
..+.+.+.++++.|+++|+++++|+ |.... ....+.+... |.. .+.
T Consensus 178 ~~~~~~~~~~~~~A~~~g~~~~~H~~E~~~~-~~~~~al~~l-------------------------------g~~-ri~ 224 (340)
T PRK09358 178 GFPPSKFARAFDRARDAGLRLTAHAGEAGGP-ESIWEALDEL-------------------------------GAE-RIG 224 (340)
T ss_pred CCCHHHHHHHHHHHHHCCCCeEEcCCCCCch-hHHHHHHHHc-------------------------------CCc-ccc
Confidence 3578899999999999999999998 43211 1111111111 221 256
Q ss_pred cCCCHH-HHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCC
Q 014320 290 HVMSMD-AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDH 368 (427)
Q Consensus 290 H~~~~~-~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~ 368 (427)
|+.... .-+.++.++++|+.+.+ ||......... ..+ ..+| ++++++.|+.++||||.
T Consensus 225 Hg~~l~~~~~~~~~l~~~gi~v~~--cP~Sn~~l~~~---------~~~-~~~p---------i~~l~~~Gv~v~lgTD~ 283 (340)
T PRK09358 225 HGVRAIEDPALMARLADRRIPLEV--CPTSNVQTGAV---------PSL-AEHP---------LKTLLDAGVRVTINTDD 283 (340)
T ss_pred hhhhhccCHHHHHHHHHcCCeEEE--CCCcccccccc---------CCc-ccCh---------HHHHHHCCCEEEECCCC
Confidence 665542 12568888999976665 77632221100 000 1233 56799999999999997
Q ss_pred CCC
Q 014320 369 CAF 371 (427)
Q Consensus 369 ~p~ 371 (427)
.++
T Consensus 284 ~~~ 286 (340)
T PRK09358 284 PLV 286 (340)
T ss_pred Ccc
Confidence 443
No 131
>PF02126 PTE: Phosphotriesterase family; InterPro: IPR001559 Synonym(s): Paraoxonase, A-esterase, Aryltriphosphatase, Phosphotriesterase, Paraoxon hydrolase Bacteria such as Brevundimonas diminuta (Pseudomonas diminuta) harbour a plasmid that carries the gene for Aryldialkylphosphatase (3.1.8.1 from EC) (PTE) (also known as parathion hydrolase). This enzyme has attracted interest because of its potential use in the detoxification of chemical waste and warfare agents and its ability to degrade agricultural pesticides such as parathion. It acts specifically on synthetic organophosphate triesters and phosphorofluoridates. It does not seem to have a natural occuring substrate and may thus have optimally evolved for utilizing paraoxon. Aryldialkylphosphatase belongs to a family [, ] of enzymes that possess a binuclear zinc metal centre at their active site. The two zinc ions are coordinated by six different residues, six of which being histidines. This family so far includes, in addition to the parathion hydrolase, the following proteins: Escherichia coli protein Php, the substrate of which is not yet known. Mycobacterium tuberculosis phosphotriesterase homology protein Rv0230C. Mammalian phosphotriesterase related protein (PTER) (RPR-1). ; GO: 0008270 zinc ion binding, 0016788 hydrolase activity, acting on ester bonds, 0009056 catabolic process; PDB: 3MSR_A 3OVG_D 3K2G_C 1BF6_B 3OQE_A 3C86_A 3SO7_A 2D2G_A 2R1P_A 2D2H_A ....
Probab=98.42 E-value=4.1e-06 Score=78.71 Aligned_cols=261 Identities=15% Similarity=0.114 Sum_probs=132.1
Q ss_pred cccccccccccCcCCC--------C----ChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHH-HHHhccccceec
Q 014320 106 GGIDPHTHLAMEFMGS--------E----TIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAY-EKKAKNSCMDYG 172 (427)
Q Consensus 106 G~ID~H~H~~~~~~g~--------~----~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 172 (427)
|++.+|=|+...+.+. . ..+......+...+.|+.|++|+...........+++. ++.+.+....-+
T Consensus 7 G~tl~HEHl~~d~~~~~~~~~~~~~~~~~~~~~~~~El~~~k~~Gg~tiVd~T~~g~GRd~~~l~~is~~tGv~II~~TG 86 (308)
T PF02126_consen 7 GFTLMHEHLLIDLSGFYKDPDEALDDRDEDVEAAVAELKEFKAAGGRTIVDATPIGLGRDVEALREISRRTGVNIIASTG 86 (308)
T ss_dssp SSEEEEEESEEETTTHHHHTGGGGCGHHHHHHHHHHHHHHHHHTTEEEEEE--SGGGTB-HHHHHHHHHHHT-EEEEEEE
T ss_pred CCeecccCeeecChhhccCCCcchhhhhhhHHHHHHHHHHHHHcCCCEEEecCCcccCcCHHHHHHHHHHhCCeEEEeCC
Confidence 7888888886542211 1 11222233455677899999998644333222333333 223333333444
Q ss_pred eeccccC------CC-hhhHHHHHHHHHHcCCC-------eEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCCh
Q 014320 173 FHMAITK------WD-EVVSDEMEVMVKEKGIN-------SFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (427)
Q Consensus 173 ~~~~~~~------~~-~~~~~~~~~l~~~~g~~-------~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~ 238 (427)
++..... .+ ++..+.+.+-+ ..|++ .||...+...........++++..++++.|+++++|.+..
T Consensus 87 ~y~~~~~p~~~~~~s~e~la~~~i~Ei-~~GidgT~ikaG~Ik~~~~~~~it~~E~k~lrAaa~A~~~TG~pI~~H~~~g 165 (308)
T PF02126_consen 87 FYKEPFYPEWVREASVEELADLFIREI-EEGIDGTGIKAGIIKEIGSSNPITPLEEKVLRAAARAHKETGAPISTHTGRG 165 (308)
T ss_dssp E-SGGCSCHHHHTSHHHHHHHHHHHHH-HT-STTSSB-ESEEEEEEBTTBCEHHHHHHHHHHHHHHHHHT-EEEEEESTT
T ss_pred CCccccCChhhhcCCHHHHHHHHHHHH-HhcCCCCccchhheeEeeccCCCCHHHHHHHHHHHHHHHHhCCeEEEcCCCC
Confidence 4432111 11 11122222222 34543 5777655422222234567788888888999999998654
Q ss_pred h-hHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCcc
Q 014320 239 D-AVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVS 317 (427)
Q Consensus 239 ~-~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~ 317 (427)
. .-.+..+.+.+.|+. --++.++|+.....++.++.+.+.|+.+-.+..-+
T Consensus 166 ~~~~~e~~~il~e~Gv~----------------------------~~rvvigH~D~~~D~~y~~~la~~G~~l~~D~~g~ 217 (308)
T PF02126_consen 166 TRMGLEQLDILEEEGVD----------------------------PSRVVIGHMDRNPDLDYHRELADRGVYLEFDTIGR 217 (308)
T ss_dssp GTCHHHHHHHHHHTT------------------------------GGGEEETSGGGST-HHHHHHHHHTT-EEEETTTT-
T ss_pred CcCHHHHHHHHHHcCCC----------------------------hhHeEEeCCCCCCCHHHHHHHHhcCCEEEecCCcc
Confidence 3 333444555555542 13688999986666777888888998776655532
Q ss_pred ceeeCcccccCCCcccCceeEEcCCCCCccc---HHHHHHHHhcCC--ceEEecCCCCCChhhhhcCCCCCccCCCCCch
Q 014320 318 GLVLDDSWLWHSDFVTAAKYVMSPPIRASGH---NKALQAALATGI--LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNG 392 (427)
Q Consensus 318 ~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~---~~~l~~~l~~G~--~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~ 392 (427)
.++ ++. .+|.+.-..| .+.+.+++++|- .+.+|.|-.-..... +.|-.|
T Consensus 218 ~~~---------g~~------~~~~~~~~~d~~ri~~l~~L~~~Gy~~qIlLS~D~~~k~~~~-----------~~gg~g 271 (308)
T PF02126_consen 218 EFS---------GKD------KNPRVGYPPDEERIELLKELIEEGYADQILLSHDIGRKSRLY-----------RYGGGG 271 (308)
T ss_dssp B-T---------TTT------TCHSCTTS-HHHHHHHHHHHHHTTTGGGEEE-HHHESEEGSS-----------SCCHHH
T ss_pred ccc---------Ccc------cCccCCCCCHHHHHHHHHHHHHcCCcCcEEEecccccccccc-----------ccCCCC
Confidence 111 000 0111111222 366778888887 588999943211100 111111
Q ss_pred --h----hHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 393 --I----EERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 393 --~----e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
. +..+|.+. +.+++-+++=++...||+|+
T Consensus 272 ~~~~~i~~~fiP~L~-----~~Gv~~~~i~~ilv~NP~r~ 306 (308)
T PF02126_consen 272 YGYIYILTRFIPRLK-----ERGVSEEDIDKILVENPARI 306 (308)
T ss_dssp HTTTHHHHTHHHHHH-----HTTS-HHHHHHHHTHHHHHH
T ss_pred ccHHHHHHHHHHHHH-----HcCCCHHHHHHHHHHCHHHH
Confidence 1 22334332 35799999999999999985
No 132
>KOG3892 consensus N-acetyl-glucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=98.16 E-value=3.7e-06 Score=74.62 Aligned_cols=93 Identities=15% Similarity=0.148 Sum_probs=66.2
Q ss_pred cEEEECcEEEcCCCceeeeEEEeCCeEEEeeCC--CCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhh----H
Q 014320 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPN--INVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDD----F 127 (427)
Q Consensus 54 ~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~--~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~----~ 127 (427)
-+-+.|.+|+-+......+++|+||||..-.+- .+...+...||++|.++.|||||.....+....=..+.++ +
T Consensus 13 llQFtNCrilR~g~l~~edlWVR~GRIldpe~vFFeErt~Ad~riDCgG~IlaPGfIDlQiNGGfGvDFS~dte~~~eGv 92 (407)
T KOG3892|consen 13 LLQFTNCRILRGGKLLREDLWVRGGRILDPEKVFFEERTVADERIDCGGRILAPGFIDLQINGGFGVDFSQDTEDVGEGV 92 (407)
T ss_pred eeeeeeeEEeeCCceeehheeEeCCeecCcccccceeccchhheeccCCeeecCceEEEEecCccccccccchhhhhhhH
Confidence 356889999988888889999999999753321 1212346789999999999999999886654211122233 3
Q ss_pred HHHHHHHHcCCceEEecCc
Q 014320 128 FSGQAAALAGGTTMHIDFV 146 (427)
Q Consensus 128 ~~~~~~~l~~GvTtv~d~~ 146 (427)
..-++..+++|||++....
T Consensus 93 AlVAr~ll~hGvtsf~Pt~ 111 (407)
T KOG3892|consen 93 ALVARQLLSHGVTSFCPTL 111 (407)
T ss_pred HHHHHHHHhcCCCcCCCcc
Confidence 3446778999999998643
No 133
>COG1735 Php Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=97.98 E-value=0.00066 Score=62.09 Aligned_cols=156 Identities=17% Similarity=0.081 Sum_probs=86.8
Q ss_pred HHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhccccceeceecccc------CCC-hhhHHHHHHHHHHcC------
Q 014320 131 QAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAIT------KWD-EVVSDEMEVMVKEKG------ 196 (427)
Q Consensus 131 ~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~l~~~~g------ 196 (427)
.....+.|+-|++|+....-. +.....+-.++.+.+....-+++.... ... ++..+.+.+-+ ++|
T Consensus 54 ~~~~~a~Gg~TIVD~T~~~~GRdv~~m~~vs~atglnIV~~TGfy~~~~~p~~~~~~~i~~~ae~~v~ei-~~Gi~gT~i 132 (316)
T COG1735 54 LKRLMARGGQTIVDATNIGIGRDVLKMRRVAEATGLNIVAATGFYKAAFHPEYFALRPIEELAEFVVKEI-EEGIAGTGI 132 (316)
T ss_pred HHHHHHcCCCeEeeCCccccCcCHHHHHHHHHHhCCcEEEeccccccccchhHHhhCCHHHHHHHHHHHH-HhcccCCcc
Confidence 344577899999998654333 334444444444444333333332111 111 22223333333 344
Q ss_pred -CCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHH
Q 014320 197 -INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRA 275 (427)
Q Consensus 197 -~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~ 275 (427)
+..||...++.+........|+.+.+..++.|.|+++|.+....-.+.++.+.+.|+.-
T Consensus 133 kAGiIk~~~~~~~iTp~Eek~lrAaA~A~~~Tg~Pi~tHt~~gt~g~eq~~il~~egvdl-------------------- 192 (316)
T COG1735 133 KAGIIKEAGGSPAITPLEEKSLRAAARAHKETGAPISTHTPAGTMGLEQLRILAEEGVDL-------------------- 192 (316)
T ss_pred ccceeeeccCcccCCHHHHHHHHHHHHHhhhcCCCeEEeccchhhhHHHHHHHHHcCCCh--------------------
Confidence 33455544433322223446777777778899999999755443333445555555420
Q ss_pred HHHHHhcCCCEEEEcCC-CHHHHHHHHHHhhcCCCEEEecC
Q 014320 276 IRLAEFVNTPLYVVHVM-SMDAMEEIAKARKAGQRVIGEPV 315 (427)
Q Consensus 276 ~~~~~~~g~~~~i~H~~-~~~~~~~i~~~~~~G~~v~~~~~ 315 (427)
.++.++|+. +.+.+.-.+.++.+|+.+..+..
T Consensus 193 --------~~v~igH~d~n~dd~~y~~~l~~~Ga~l~fD~i 225 (316)
T COG1735 193 --------RKVSIGHMDPNTDDVYYQKKLADRGAFLEFDRI 225 (316)
T ss_pred --------hHeeEeccCCCCChHHHHHHHHhcCceEEeccc
Confidence 257899998 67777888889988976655443
No 134
>cd01311 PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM). This reaction is part of the protocatechuate (PCA) 4,5-cleavage pathway. PCA is one of the most important intermediate metabolites in the bacterial pathways for various phenolic compounds, including lignin, which is the most abundant aromatic material in nature.
Probab=97.84 E-value=0.0064 Score=56.37 Aligned_cols=50 Identities=26% Similarity=0.321 Sum_probs=38.3
Q ss_pred HHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 185 SDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 185 ~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
.++++++. ..|+.++|+.....+.. +++.+..+++.+.++|+++.+|+..
T Consensus 83 ~~~l~~~~-~~g~rGvRl~~~~~~~~--~~~~~~~~~~~~~~~gl~v~~~~~~ 132 (263)
T cd01311 83 DAELKEMH-DAGVRGVRFNFLFGGVD--NKDELDEIAKRAAELGWHVQVYFDA 132 (263)
T ss_pred HHHHHHHH-HCCCeEEEEecccCCCC--CHHHHHHHHHHHHHcCCEEEEEeCH
Confidence 35666665 68999999865443332 7788899999999999999999743
No 135
>COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only]
Probab=97.83 E-value=0.00033 Score=60.85 Aligned_cols=168 Identities=17% Similarity=0.117 Sum_probs=85.9
Q ss_pred ccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHH--------HHhccccceeceeccc
Q 014320 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYE--------KKAKNSCMDYGFHMAI 177 (427)
Q Consensus 107 ~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 177 (427)
+||+|+|+..- .-+++...+...+..=+|...|.....+. ...+.++... +.|.+..+.+|.|...
T Consensus 2 ~iD~HiH~d~r-----~~eDlekMa~sGI~~Vit~AhdP~~~~~~~v~~~h~~rl~~~E~~Ra~~~Gl~~~vavGvHPr~ 76 (254)
T COG1099 2 YIDSHIHLDVR-----GFEDLEKMALSGIREVITLAHDPYPMKTAEVYLDHFRRLLGVEPERAEKAGLKLKVAVGVHPRA 76 (254)
T ss_pred ccccccccccc-----cHHHHHHHHHhChhhhhhcccCCCCcccHHHHHHHHHHHHccchhhHHhhCceeeEEeccCCCC
Confidence 69999998653 34454333333333334444454211111 2223333222 1222344455555432
Q ss_pred c-CCChhhHHHHHHHHHHcCCCeEEEEEecCCCccCC---HHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcC
Q 014320 178 T-KWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMIN---DELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELG 252 (427)
Q Consensus 178 ~-~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~---~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G 252 (427)
. ..-++.+.++.++....++..|... |.-..+ .+.+++.++.|+++++|+.+|. ....
T Consensus 77 iP~e~~~~l~~L~~~l~~e~VvAiGEi----GLe~~t~~E~evf~~QL~LA~e~dvPviVHTPr~nK------------- 139 (254)
T COG1099 77 IPPELEEVLEELEELLSNEDVVAIGEI----GLEEATDEEKEVFREQLELARELDVPVIVHTPRRNK------------- 139 (254)
T ss_pred CCchHHHHHHHHHhhcccCCeeEeeec----ccccCCHHHHHHHHHHHHHHHHcCCcEEEeCCCCcc-------------
Confidence 2 2234556666666644455555432 122223 4568899999999999999995 3221
Q ss_pred CCCcccccccCCHHHHHHHHHHHHHHHHhcCC---CEEEEcCCCHHHHHHHHHHhhcCCCEEEecCc
Q 014320 253 ITGPEGHALSRPPLLEGEATTRAIRLAEFVNT---PLYVVHVMSMDAMEEIAKARKAGQRVIGEPVV 316 (427)
Q Consensus 253 ~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~---~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p 316 (427)
..+..+.++.....+. .+.|.|++.. .++..-..+..+...++|
T Consensus 140 ----------------~e~t~~ildi~~~~~l~~~lvvIDH~N~e----tv~~vld~e~~vGlTvqP 186 (254)
T COG1099 140 ----------------KEATSKILDILIESGLKPSLVVIDHVNEE----TVDEVLDEEFYVGLTVQP 186 (254)
T ss_pred ----------------hhHHHHHHHHHHHcCCChhheehhcccHH----HHHHHHhccceEEEEecC
Confidence 1233444444444443 3678898543 344444556655555555
No 136
>cd01321 ADGF Adenosine deaminase-related growth factors (ADGF), a novel family of secreted growth-factors with sequence similarty to adenosine deaminase.
Probab=97.21 E-value=0.054 Score=52.22 Aligned_cols=109 Identities=16% Similarity=0.075 Sum_probs=63.0
Q ss_pred CCHHHHHHHHHHHHHcC--CcEEEec-CChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEE
Q 014320 212 INDELLIEGFKRCKSLG--ALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYV 288 (427)
Q Consensus 212 ~~~~~l~~~~~~a~~~g--~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i 288 (427)
.+...+..+++.|++.| +++.+|+ |....- . .+ ...+.+++.+ |. -.|
T Consensus 176 ~~~~~f~~~f~~ar~~g~~l~~t~HAGE~~~~~-----------~---------~~----~~~v~~al~l----g~-~RI 226 (345)
T cd01321 176 RPLLDFLPQLLWFPKQCAEIPFFFHAGETNGDG-----------T---------ET----DENLVDALLL----NT-KRI 226 (345)
T ss_pred CCHHHHHHHHHHHHHhCCCCceEeecCCCcCCC-----------C---------CC----hhHHHHHHHh----CC-CcC
Confidence 35778889999999999 9999998 543100 0 00 0112222211 11 235
Q ss_pred EcCCCH-HHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecC
Q 014320 289 VHVMSM-DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTD 367 (427)
Q Consensus 289 ~H~~~~-~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD 367 (427)
.|.... +.-++++.++++++.+ ++||........ .+.+ ..-.+..+++.|+.++|+||
T Consensus 227 GHG~~~~~dp~ll~~l~~~~I~l--EvCPtSN~~~~~---------------v~~~----~~HPl~~ll~~Gv~vtinTD 285 (345)
T cd01321 227 GHGFALPKHPLLMDLVKKKNIAI--EVCPISNQVLGL---------------VSDL----RNHPAAALLARGVPVVISSD 285 (345)
T ss_pred ccccccCcCHHHHHHHHHcCCeE--EECcchhhhhcc---------------ccch----hhChHHHHHHCCCeEEEeCC
Confidence 565543 2237788888888655 558864332211 0111 11125679999999999999
Q ss_pred CCC
Q 014320 368 HCA 370 (427)
Q Consensus 368 ~~p 370 (427)
...
T Consensus 286 Dp~ 288 (345)
T cd01321 286 DPG 288 (345)
T ss_pred Ccc
Confidence 743
No 137
>PTZ00124 adenosine deaminase; Provisional
Probab=97.05 E-value=0.025 Score=54.74 Aligned_cols=131 Identities=13% Similarity=0.165 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHcCCcEEEec-CC--hhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcC
Q 014320 215 ELLIEGFKRCKSLGALAMVHA-EN--GDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (427)
Q Consensus 215 ~~l~~~~~~a~~~g~~v~~H~-e~--~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~ 291 (427)
..+..+++.|++.|+++.+|+ |. ....... .+++.. .+. -.|.|.
T Consensus 206 ~~f~~~f~~Ar~~Gl~~t~HaGE~~~~~~~~~v----------------------------~~ai~~---l~~-~RIGHG 253 (362)
T PTZ00124 206 KPFKDIFDYVREAGVNLTVHAGEDVTLPNLNTL----------------------------YSAIQV---LKV-KRIGHG 253 (362)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCCCCcchhH----------------------------HHHHHH---hCC-Cccccc
Confidence 568899999999999999998 53 2111111 111111 121 236666
Q ss_pred CCH-HHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCC
Q 014320 292 MSM-DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCA 370 (427)
Q Consensus 292 ~~~-~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p 370 (427)
... +.-++++.++++++.+. +||......... +.+ ..-.+..+++.|+.++|+||...
T Consensus 254 ~~~~~d~~l~~~l~~~~I~lE--vCPtSN~~~~~v---------------~~~----~~HPi~~l~~~Gv~v~InTDDp~ 312 (362)
T PTZ00124 254 IRVAESQELIDMVKEKDILLE--VCPISNVLLNNA---------------KSM----DTHPIRKLYDAGVKVSVNSDDPG 312 (362)
T ss_pred cccCCCHHHHHHHHHcCCeEE--ECCcchhhhhcC---------------Cch----hhHHHHHHHHCCCcEEEeCCCcc
Confidence 543 12377888999886555 588643322110 101 11236679999999999999743
Q ss_pred CChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHH
Q 014320 371 FNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLT 419 (427)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~ 419 (427)
... +.+.--|....+..+++.+++.+++
T Consensus 313 ~~~---------------------t~l~~Ey~~~~~~~gls~~~l~~l~ 340 (362)
T PTZ00124 313 MFL---------------------TNINDDYEELYTHLNFTLADFMKMN 340 (362)
T ss_pred ccC---------------------CChhHHHHHHHHHcCCCHHHHHHHH
Confidence 321 1121222223345679988888763
No 138
>cd00443 ADA_AMPD Adenosine/AMP deaminase. Adenosine deaminases (ADAs) are present in pro- and eukaryotic organisms and catalyze the zinc dependent irreversible deamination of adenosine nucleosides to inosine nucleosides and ammonia. The eukaryotic AMP deaminase catalyzes a similar reaction leading to the hydrolytic removal of an amino group at the 6 position of the adenine nucleotide ring, a branch point in the adenylate catabolic pathway.
Probab=96.80 E-value=0.085 Score=50.04 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=62.5
Q ss_pred CHHHHHHHHHHHHHcC-CcEEEec-CChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEc
Q 014320 213 NDELLIEGFKRCKSLG-ALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVH 290 (427)
Q Consensus 213 ~~~~l~~~~~~a~~~g-~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H 290 (427)
+...+...++.|++.| +++.+|+ |.... ..+.+++... .-.|.|
T Consensus 151 ~~~~f~~~~~~ar~~g~l~~t~HaGE~~~~-----------------------------~~v~~~~~~~-----~~RIgH 196 (305)
T cd00443 151 PLRDFYSYYEYARRLGLLGLTLHCGETGNR-----------------------------EELLQALLLL-----PDRIGH 196 (305)
T ss_pred CHHHHHHHHHHHHHcCCcceEEeecCCCCh-----------------------------HHHHHHHHhc-----cceeec
Confidence 5778899999999999 9999997 54211 1112222221 234666
Q ss_pred CCCHH-HHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCC
Q 014320 291 VMSMD-AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHC 369 (427)
Q Consensus 291 ~~~~~-~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~ 369 (427)
..... .-++++.++++|+.+.+ ||......... ..+ ...| +.++++.|+.++|+||..
T Consensus 197 g~~~~~~p~~~~~l~~~~i~ie~--CP~SN~~~~~~---------~~~-~~hP---------~~~~~~~G~~v~i~TDd~ 255 (305)
T cd00443 197 GIFLLKHPELIYLVKLRNIPIEV--CPTSNVVLGTV---------QSY-EKHP---------FMRFFKAGLPVSLSTDDP 255 (305)
T ss_pred eEecCCCHHHHHHHHHcCCEEEE--CcchhhhhcCC---------CCh-hhCh---------HHHHHHCCCeEEEeCCCC
Confidence 65431 12668888888876654 87643222110 000 1133 566899999999999974
Q ss_pred C
Q 014320 370 A 370 (427)
Q Consensus 370 p 370 (427)
.
T Consensus 256 ~ 256 (305)
T cd00443 256 G 256 (305)
T ss_pred c
Confidence 3
No 139
>PF00449 Urease_alpha: Urease alpha-subunit, N-terminal domain; InterPro: IPR011612 Urease (urea amidohydrolase, 3.5.1.5 from EC) catalyses the hydrolysis of urea to form ammonia and carbamate. The subunit composition of urease from different sources varies [], but each holoenzyme consists of four structural domains []: three structural domains and a nickel-binding catalytic domain common to amidohydrolases []. Urease is unique among nickel metalloenzymes in that it catalyses a hydrolysis rather than a redox reaction. In Helicobacter pylori, the gamma and beta domains are fused and called the alpha subunit (IPR008223 from INTERPRO). The catalytic subunit (called beta or B) has the same organisation as the Klebsiella alpha subunit. Jack bean (Canavalia ensiformis) urease has a fused gamma-beta-alpha organisation (IPR008221 from INTERPRO). The N-terminal domain is a composite domain and plays a major trimer stabilising role by contacting the catalytic domain of the symmetry related alpha-subunit []. ; GO: 0009039 urease activity, 0016151 nickel ion binding, 0019627 urea metabolic process; PDB: 3LA4_A 2UBP_C 3UBP_C 1UBP_C 1S3T_C 1IE7_C 4UBP_C 1E9Y_B 1E9Z_B 3QGA_O ....
Probab=96.61 E-value=0.0031 Score=48.73 Aligned_cols=37 Identities=19% Similarity=0.305 Sum_probs=31.5
Q ss_pred CccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCC
Q 014320 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNIN 88 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~ 88 (427)
..|++|.|+.|+|..++..++|-|+||||+.||....
T Consensus 65 ~lD~VItNa~IiD~~GI~KADIGIkdG~I~gIGkAGN 101 (121)
T PF00449_consen 65 ALDLVITNALIIDYTGIVKADIGIKDGRIVGIGKAGN 101 (121)
T ss_dssp C-SEEEEEEEEEETTEEEEEEEEEETTEEEEEE-EB-
T ss_pred cccEEEeCcEEEecCCcEEeeEEeeCCEEEEEeccCC
Confidence 4689999999999988999999999999999997543
No 140
>PF04909 Amidohydro_2: Amidohydrolase; InterPro: IPR006992 These proteins are related to the metal-dependent hydrolase superfamily []. The family includes 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase which converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). ACMS can be converted non-enzymatically to quinolate, a potent endogenous excitoxin of neuronal cells which is implicated in the pathogenesis of various neurodegenerative disorders. In the presence of AMCSD, ACMS is converted to AMS, a benign catabolite. 2-amino-3-(3-oxoprop-2-enyl)-but-2-enedioate = 2-aminomuconate semialdehyde + CO2. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2QPX_A 4D8L_A 3K4W_I 3IRS_B 4DZI_B 3S4T_G 2GWG_B 3IJ6_A 2DVX_C 2DVT_C ....
Probab=96.32 E-value=0.089 Score=48.58 Aligned_cols=182 Identities=17% Similarity=0.113 Sum_probs=98.7
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecC-ChhhHHHHHHHHHHcCCCCcccc
Q 014320 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE-NGDAVFEGQKRMIELGITGPEGH 259 (427)
Q Consensus 181 ~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e-~~~~~~~~~~~l~~~G~~~~~~~ 259 (427)
.++..+++++.+...|..++|++....+....++.....+++.|.++|++|.+|+. .......
T Consensus 83 ~~~~~~~l~~~~~~~g~~Gv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~~H~g~~~~~~~~---------------- 146 (273)
T PF04909_consen 83 PEDAVEELERALQELGFRGVKLHPDLGGFDPDDPRLDDPIFEAAEELGLPVLIHTGMTGFPDAP---------------- 146 (273)
T ss_dssp HHHHHHHHHHHHHTTTESEEEEESSETTCCTTSGHCHHHHHHHHHHHT-EEEEEESHTHHHHHH----------------
T ss_pred chhHHHHHHHhccccceeeeEecCCCCccccccHHHHHHHHHHHHhhccceeeeccccchhhhh----------------
Confidence 45667778777767889999987755544444444445999999999999999964 1100000
Q ss_pred cccCCHHHHHHHHHHHHHHHHhc-CCCEEEEcCCCH--HHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCce
Q 014320 260 ALSRPPLLEGEATTRAIRLAEFV-NTPLYVVHVMSM--DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAK 336 (427)
Q Consensus 260 ~~~~p~~~e~~a~~~~~~~~~~~-g~~~~i~H~~~~--~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~ 336 (427)
...........++.+. ++++.+.|+... .-.+.++.+++. -+++++++-.... .
T Consensus 147 -------~~~~~~~~~~~~~~~~P~l~ii~~H~G~~~~~~~~~~~l~~~~-~nvy~d~s~~~~~---------------~ 203 (273)
T PF04909_consen 147 -------SDPADPEELEELLERFPDLRIILAHLGGPFPWWEEALRLLDRF-PNVYVDLSGIPPF---------------W 203 (273)
T ss_dssp -------HHHHHHHHHTTHHHHSTTSEEEESGGGTTHHHHHHHHHHHHHH-TTEEEECHSHHSS---------------E
T ss_pred -------HHHHHHHHHHHHHHHhcCCeEEEecCcccchhHHHHHHHHHhC-Ccccccccccccc---------------c
Confidence 0011222233344444 688999999877 322334444432 3677766531100 0
Q ss_pred eEEcCCCCCcccHHHHHHHHhc-C-CceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHH
Q 014320 337 YVMSPPIRASGHNKALQAALAT-G-ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTD 414 (427)
Q Consensus 337 ~~~~pplr~~~~~~~l~~~l~~-G-~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~ 414 (427)
. ..+ .......++++++. | ..+.+|||+ |+...... .+...-... . ..++.++
T Consensus 204 ~-~~~---~~~~~~~l~~~~~~~g~drilfGSD~-P~~~~~~~---------------~~~~~~~~~--~---~~l~~~~ 258 (273)
T PF04909_consen 204 Y-FWP---PSFDRPFLRRAVDEFGPDRILFGSDY-PHPDGASP---------------YEYIWEAYF--L---DDLSEEE 258 (273)
T ss_dssp E-EET---THHCHHHHHHHHHHHTGGGEEEE--T-TSSTHHHH---------------HHHHHHHHH--H---HHSSHHH
T ss_pred c-cCc---ccccHHHHHHHHHHhCCceEEecCCC-CCCCcccc---------------HHHHHHhhh--c---cCCCHHH
Confidence 0 001 11223445555543 2 368999996 76654321 011111100 1 1189999
Q ss_pred HHHHHchhhhcC
Q 014320 415 YVRLTSTEWGRL 426 (427)
Q Consensus 415 ~v~~~t~npA~~ 426 (427)
.-+++..|++|+
T Consensus 259 ~~~i~~~NA~rl 270 (273)
T PF04909_consen 259 REKILYDNARRL 270 (273)
T ss_dssp HHHHHTHHHHHH
T ss_pred HHHHHhHhHHHH
Confidence 999999999874
No 141
>PF00962 A_deaminase: Adenosine/AMP deaminase immunodeficiency disease (SCID); InterPro: IPR001365 Adenosine deaminase (3.5.4.4 from EC) catalyzes the hydrolytic deamination of adenosine into inosine and AMP deaminase (3.5.4.6 from EC) catalyzes the hydrolytic deamination of AMP into IMP. It has been shown [] that these two enzymes share three regions of sequence similarities; these regions are centred on residues which are proposed to play an important role in the catalytic mechanism of these two enzymes.; GO: 0019239 deaminase activity, 0009168 purine ribonucleoside monophosphate biosynthetic process; PDB: 3LGG_B 3LGD_B 2AMX_B 3EWD_A 2QVN_A 2PGF_A 2PGR_A 3EWC_A 1W1I_G 1O5R_A ....
Probab=95.84 E-value=0.059 Score=51.76 Aligned_cols=131 Identities=18% Similarity=0.157 Sum_probs=66.8
Q ss_pred ChhhHHHHHHHHHHc---CCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcCCCCc
Q 014320 181 DEVVSDEMEVMVKEK---GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGP 256 (427)
Q Consensus 181 ~~~~~~~~~~l~~~~---g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~~~ 256 (427)
.++..+++.++.... ++.++.+.-... ......+..+++.+++.|+++.+|+ |... ...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~vvG~dl~g~E~---~~~~~~~~~~~~~a~~~gl~~t~HaGE~~~-~~~------------- 208 (331)
T PF00962_consen 146 PDEWAEEIVELASKYPDKGVVGFDLAGDED---GGPPLKFAPAFRKAREAGLKLTVHAGETGG-PEH------------- 208 (331)
T ss_dssp THHHHHHHHHHHHHTTTTTEEEEEEESSTT---STTGGGHHHHHHHHHHTT-EEEEEESSSST-HHH-------------
T ss_pred hHHHHHHHHHHHhhcccceEEEEEecCCcc---cCchHHHHHHHhhhcccceeecceecccCC-ccc-------------
Confidence 445555555554332 333443332222 1233448889999999999999998 5432 211
Q ss_pred ccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHH-HHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCc
Q 014320 257 EGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD-AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAA 335 (427)
Q Consensus 257 ~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~-~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~ 335 (427)
+..++.. .+. -.|.|..... .-++++.+++++ |..++||.......... ++.
T Consensus 209 ---------------~~~ai~~---l~~-~RIgHG~~~~~~p~l~~~~~~~~--I~iEvcptSN~~~~~~~---~~~--- 261 (331)
T PF00962_consen 209 ---------------IRDAILL---LGA-DRIGHGVRLIKDPELLELLAERQ--IPIEVCPTSNVQLGAVP---SYE--- 261 (331)
T ss_dssp ---------------HHHHHHT---ST--SEEEE-GGGGGSHHHHHHHHHTT---EEEE-HHHHHHTTSSS---TGG---
T ss_pred ---------------ccchhhh---ccc-eeecchhhhhhhhHHHHHHHHhC--CCeeeCCCcCcccceee---ecc---
Confidence 1111221 222 2477776431 236678888877 45566887543332110 110
Q ss_pred eeEEcCCCCCcccHHHHHHHHhcCCceEEecCC
Q 014320 336 KYVMSPPIRASGHNKALQAALATGILQLVGTDH 368 (427)
Q Consensus 336 ~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~ 368 (427)
..| +++.++.|+.++|+||.
T Consensus 262 ----~hP---------~~~~~~~gv~v~i~TDd 281 (331)
T PF00962_consen 262 ----EHP---------LRKLLDAGVPVSINTDD 281 (331)
T ss_dssp ----G-C---------HHHHHHTT-EEEE--BS
T ss_pred ----hhH---------HHHHHHcCCceeccCCC
Confidence 233 56689999999999996
No 142
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=94.81 E-value=2.4 Score=39.86 Aligned_cols=55 Identities=24% Similarity=0.361 Sum_probs=41.1
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
+...+++++.+.+.|..++|+.-...+. ..++..+..+.+.|.++|+++.+|.-.
T Consensus 112 ~~a~~E~er~v~~~gf~g~~l~p~~~~~-~~~~~~~~pi~~~a~~~gvpv~ihtG~ 166 (293)
T COG2159 112 EAAAEELERRVRELGFVGVKLHPVAQGF-YPDDPRLYPIYEAAEELGVPVVIHTGA 166 (293)
T ss_pred HHHHHHHHHHHHhcCceEEEecccccCC-CCCChHHHHHHHHHHHcCCCEEEEeCC
Confidence 4467788888866788888875433322 235566899999999999999999743
No 143
>COG1816 Add Adenosine deaminase [Nucleotide transport and metabolism]
Probab=94.69 E-value=0.94 Score=43.32 Aligned_cols=108 Identities=14% Similarity=0.106 Sum_probs=64.7
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEc
Q 014320 211 MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVH 290 (427)
Q Consensus 211 ~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H 290 (427)
....+.+..+++.+++.|+.+.+||........+. .++..... -.|.|
T Consensus 181 ~~p~~~f~~~f~~~r~~gl~lt~HaGE~~~~~~i~----------------------------~al~~~~~----~rI~H 228 (345)
T COG1816 181 GYPPELFVSLFKLARDNGLKLTIHAGEAGGPESIR----------------------------DALDLLGA----ERIGH 228 (345)
T ss_pred cCCHHHHHHHHHHHHHcCceEEEeccccCCcHHHH----------------------------HHHHHhch----hhhcc
Confidence 34688999999999999999999984222111111 11111100 02455
Q ss_pred CCCH-HHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCC
Q 014320 291 VMSM-DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHC 369 (427)
Q Consensus 291 ~~~~-~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~ 369 (427)
.-.. +.-++++++.+.++++.+ ||....-. +..+.++. -.+.++++.|+.++|.||..
T Consensus 229 Gi~~~~d~~L~~~l~~~qI~lev--CP~SNi~~---------------~~v~~~~~----hPf~~~~d~Gv~VsLnTDdp 287 (345)
T COG1816 229 GIRAIEDPELLYRLAERQIPLEV--CPLSNIQL---------------GVVPSLAK----HPFKKLFDAGVKVSLNTDDP 287 (345)
T ss_pred ccccccCHHHHHHHHHhCCeeEE--CCcchhhc---------------ccccchhh----CcHHHHHHcCCceEEcCCCh
Confidence 5332 223778888888877765 88633211 01111211 12677999999999999975
Q ss_pred CC
Q 014320 370 AF 371 (427)
Q Consensus 370 p~ 371 (427)
++
T Consensus 288 ~~ 289 (345)
T COG1816 288 LY 289 (345)
T ss_pred hh
Confidence 54
No 144
>COG4464 CapC Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=94.24 E-value=0.72 Score=40.34 Aligned_cols=40 Identities=20% Similarity=0.303 Sum_probs=29.2
Q ss_pred ccccccccccCc-CCCCChhhHHHHHHHHHcCCceEEecCc
Q 014320 107 GIDPHTHLAMEF-MGSETIDDFFSGQAAALAGGTTMHIDFV 146 (427)
Q Consensus 107 ~ID~H~H~~~~~-~g~~~~e~~~~~~~~~l~~GvTtv~d~~ 146 (427)
+||.|+|+-... .|..+.++-...++.|.+.|||+++...
T Consensus 1 MIDIH~HIlp~iDDGp~s~eesl~ml~~A~~qGvt~iVaTs 41 (254)
T COG4464 1 MIDIHSHILPDIDDGPKSLEESLAMLREAVRQGVTKIVATS 41 (254)
T ss_pred CccccccccCCCCCCCCcHHHHHHHHHHHHHcCceEEeecc
Confidence 699999985431 2445556666678889999999999653
No 145
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=93.20 E-value=0.93 Score=43.59 Aligned_cols=113 Identities=17% Similarity=0.170 Sum_probs=70.5
Q ss_pred hhHHHHHHHHHHcCCCeEEEEEe---cC-CCccCCHHHHHHHHHHHHHcCCcEEE------ecCChhhHHHHHHHHHHcC
Q 014320 183 VVSDEMEVMVKEKGINSFKFFMA---YK-GSFMINDELLIEGFKRCKSLGALAMV------HAENGDAVFEGQKRMIELG 252 (427)
Q Consensus 183 ~~~~~~~~l~~~~g~~~ik~~~~---~~-~~~~~~~~~l~~~~~~a~~~g~~v~~------H~e~~~~~~~~~~~l~~~G 252 (427)
..++.++.++ ..|++.+-+... .+ ....++.+++++.++.||++|+.+.+ |....+.+....+.+.+.|
T Consensus 14 g~l~~l~~ai-~~GADaVY~G~~~~~~R~~a~nfs~~~l~e~i~~ah~~gkk~~V~~N~~~~~~~~~~~~~~l~~l~e~G 92 (347)
T COG0826 14 GNLEDLKAAI-AAGADAVYIGEKEFGLRRRALNFSVEDLAEAVELAHSAGKKVYVAVNTLLHNDELETLERYLDRLVELG 92 (347)
T ss_pred CCHHHHHHHH-HcCCCEEEeCCcccccccccccCCHHHHHHHHHHHHHcCCeEEEEeccccccchhhHHHHHHHHHHHcC
Confidence 3456677777 678876643321 11 12357889999999999999986644 4444444566667888888
Q ss_pred CCCcccccccCCHHHHHHHHHHHHHHHHhcC--CCEEEEcCCCHHHHHHHHHHhhcCC
Q 014320 253 ITGPEGHALSRPPLLEGEATTRAIRLAEFVN--TPLYVVHVMSMDAMEEIAKARKAGQ 308 (427)
Q Consensus 253 ~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g--~~~~i~H~~~~~~~~~i~~~~~~G~ 308 (427)
.+..... ---++.++++.+ .++|+++..+....+.++.+++.|.
T Consensus 93 vDaviv~------------Dpg~i~l~~e~~p~l~ih~S~q~~v~N~~~~~f~~~~G~ 138 (347)
T COG0826 93 VDAVIVA------------DPGLIMLARERGPDLPIHVSTQANVTNAETAKFWKELGA 138 (347)
T ss_pred CCEEEEc------------CHHHHHHHHHhCCCCcEEEeeeEecCCHHHHHHHHHcCC
Confidence 7654321 122445566555 7788877766544455555555554
No 146
>COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=92.55 E-value=8.6 Score=35.50 Aligned_cols=22 Identities=14% Similarity=0.120 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHcCCcEEEecC
Q 014320 215 ELLIEGFKRCKSLGALAMVHAE 236 (427)
Q Consensus 215 ~~l~~~~~~a~~~g~~v~~H~e 236 (427)
+.+++.++..+++|+.+..+..
T Consensus 124 ~~~r~~~~rL~~~gl~fdl~~~ 145 (279)
T COG3618 124 PAWRANVERLAKLGLHFDLQVD 145 (279)
T ss_pred HHHHHHHHHHHhcCCeEEEEeC
Confidence 6788888888888888777753
No 147
>cd01308 Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid. Formation of this bond is a spontaneous nonenzymatic reaction in nature and can profoundly effect the function of the protein. Isoaspartyl dipeptidase is an octameric enzyme that contains a binuclear zinc center in the active site of each subunit and shows a strong preference of hydrolyzing Asp-Leu dipeptides.
Probab=92.14 E-value=3 Score=40.91 Aligned_cols=72 Identities=13% Similarity=0.115 Sum_probs=46.0
Q ss_pred CCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCE--EEEcCC-CHHHHHHHHHHh-hcCCCEEEecCccceeeCcc
Q 014320 252 GITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPL--YVVHVM-SMDAMEEIAKAR-KAGQRVIGEPVVSGLVLDDS 324 (427)
Q Consensus 252 G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~--~i~H~~-~~~~~~~i~~~~-~~G~~v~~~~~p~~l~~~~~ 324 (427)
|...+..+..++|...+...+.+.+..+...+++. ...|.. ....++.+..++ +.|++++ ++|++|+.++.+
T Consensus 154 g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vh~~~~~~~~~~i~~~~~~~G~~~~-~~~~~~~~~~~~ 229 (387)
T cd01308 154 GEIAISDHRSSQPTVEELARIAAEARVGGLLGGKAGIVHIHLGDGKRALSPIFELIEETEIPIT-QFLPTHINRTAP 229 (387)
T ss_pred ceEEEcCCCCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCchHHHHHHHHHHHhcCCCcc-eeECCcccCCHH
Confidence 44444455556788877777777777766555553 344444 345667775544 4598888 899998875544
No 148
>TIGR01431 adm_rel adenosine deaminase-related growth factor. Members of this family have been described as secreted proteins with growth factor activity and regions of adenosine deaminase homology in insects, mollusks, and vertebrates.
Probab=91.62 E-value=7 Score=39.47 Aligned_cols=62 Identities=10% Similarity=-0.040 Sum_probs=36.8
Q ss_pred EEEcCCCHH-HHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEe
Q 014320 287 YVVHVMSMD-AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVG 365 (427)
Q Consensus 287 ~i~H~~~~~-~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lg 365 (427)
.|.|..... .-++++.++++++ ..|+||......... ..+ .+-| +..++++|++++|+
T Consensus 351 RIGHG~~l~~~P~l~~~vke~~I--~lEvCP~SN~~l~~v---------~~~-~~HP---------l~~lla~Gvpv~In 409 (479)
T TIGR01431 351 RIGHGFALVKHPLVLQMLKERNI--AVEVNPISNQVLQLV---------ADL-RNHP---------CAYLFADNYPMVIS 409 (479)
T ss_pred cccCcccccCCHHHHHHHHHhCC--eEEECccchhhhccc---------CCc-ccCh---------HHHHHHCCCcEEEe
Confidence 366665431 1267888888875 555688633221110 000 1123 56699999999999
Q ss_pred cCCC
Q 014320 366 TDHC 369 (427)
Q Consensus 366 SD~~ 369 (427)
||..
T Consensus 410 SDDP 413 (479)
T TIGR01431 410 SDDP 413 (479)
T ss_pred CCCc
Confidence 9973
No 149
>COG1831 Predicted metal-dependent hydrolase (urease superfamily) [General function prediction only]
Probab=91.44 E-value=10 Score=34.59 Aligned_cols=66 Identities=17% Similarity=0.183 Sum_probs=43.3
Q ss_pred cHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 348 HNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 348 ~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
.++.+.++++.|....+=||+.- .... ..+.-|. -..|--...+.+++.++.+.+.+..-.||+++
T Consensus 214 sr~~v~~a~~~g~~FmmETDyID--Dp~R-------pgavL~P----ktVPrr~~~i~~~g~~~ee~vy~i~~E~pe~V 279 (285)
T COG1831 214 SRKNVEDAAELGPRFMMETDYID--DPRR-------PGAVLGP----KTVPRRTREILEKGDLTEEDVYRIHVENPERV 279 (285)
T ss_pred cHHHHHHHHhcCCceEeeccccc--Cccc-------CCCcCCc----cchhHHHHHHHHhcCCcHHHHHHHHHhCHHHH
Confidence 45578889999999999999731 1000 0111111 13343233566788899999999999999875
No 150
>KOG1097 consensus Adenine deaminase/adenosine deaminase [Nucleotide transport and metabolism]
Probab=91.15 E-value=7.7 Score=37.61 Aligned_cols=102 Identities=18% Similarity=0.165 Sum_probs=58.0
Q ss_pred CHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcC
Q 014320 213 NDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (427)
Q Consensus 213 ~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~ 291 (427)
+...+..+...+.+.|+.+.+|| |...... -++..+++. + .-.|.|.
T Consensus 225 p~~~f~~vl~~~~~~gi~~t~HaGE~~~~~~----------------------------~v~~~LD~l---~-~~RIGHG 272 (399)
T KOG1097|consen 225 PLSLFLEVLAKAPAKGIHLTFHAGETNGGAS----------------------------VVKNALDLL---G-TERIGHG 272 (399)
T ss_pred ChhhhHHHHHhhhhcCCcEEEEccccCCChH----------------------------HHHHHHHhh---C-CccccCc
Confidence 45567777777777899999998 5431111 112222211 1 1235565
Q ss_pred CCH--HHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCC
Q 014320 292 MSM--DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDH 368 (427)
Q Consensus 292 ~~~--~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~ 368 (427)
... ++ ++++++++.++.+. +||.......... + ..+.| +...+++|++.+|+||-
T Consensus 273 ~~l~~dp-~L~~~~k~~nI~lE--iCP~SN~vl~~v~---d-------~rnhp---------~~~~~~~~vP~vI~sDD 329 (399)
T KOG1097|consen 273 YFLTKDP-ELINLLKSRNIALE--ICPISNQVLGLVS---D-------LRNHP---------VARLLAAGVPVVINSDD 329 (399)
T ss_pred eeccCCH-HHHHHHHhcCceEE--Eccchhhheeccc---c-------ccccH---------HHHHHhCCCCEEEeCCC
Confidence 432 22 67888888775555 5886332221110 0 01333 55688999999999995
No 151
>COG5016 Pyruvate/oxaloacetate carboxyltransferase [Energy production and conversion]
Probab=88.91 E-value=12 Score=36.39 Aligned_cols=127 Identities=15% Similarity=0.101 Sum_probs=68.3
Q ss_pred HHHHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEe
Q 014320 127 FFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMA 205 (427)
Q Consensus 127 ~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~ 205 (427)
+..-...+..+|++.++-+-.-++. ++...+++.++.|........+..+..-..+-..+-.+++. ..|+++|-+= +
T Consensus 100 Ve~Fv~ka~~nGidvfRiFDAlND~RNl~~ai~a~kk~G~h~q~~i~YT~sPvHt~e~yv~~akel~-~~g~DSIciK-D 177 (472)
T COG5016 100 VEKFVEKAAENGIDVFRIFDALNDVRNLKTAIKAAKKHGAHVQGTISYTTSPVHTLEYYVELAKELL-EMGVDSICIK-D 177 (472)
T ss_pred HHHHHHHHHhcCCcEEEechhccchhHHHHHHHHHHhcCceeEEEEEeccCCcccHHHHHHHHHHHH-HcCCCEEEee-c
Confidence 3455778899999999865332222 55566666666554222222222222112233344455555 6888875321 1
Q ss_pred cCCCccCCHHHHHHHHHHHHH-cCCcEEEecCChhhH-HHHHHHHHHcCCCCcc
Q 014320 206 YKGSFMINDELLIEGFKRCKS-LGALAMVHAENGDAV-FEGQKRMIELGITGPE 257 (427)
Q Consensus 206 ~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~e~~~~~-~~~~~~l~~~G~~~~~ 257 (427)
-.| ..++....++++..++ .++++.+|+.....+ ..+.-...+.|.+...
T Consensus 178 maG--lltP~~ayelVk~iK~~~~~pv~lHtH~TsG~a~m~ylkAvEAGvD~iD 229 (472)
T COG5016 178 MAG--LLTPYEAYELVKAIKKELPVPVELHTHATSGMAEMTYLKAVEAGVDGID 229 (472)
T ss_pred ccc--cCChHHHHHHHHHHHHhcCCeeEEecccccchHHHHHHHHHHhCcchhh
Confidence 122 2567777777777755 688988887443332 2222334566665443
No 152
>PRK08392 hypothetical protein; Provisional
Probab=88.52 E-value=17 Score=32.30 Aligned_cols=177 Identities=18% Similarity=0.118 Sum_probs=84.0
Q ss_pred cccccccccCcCCCCChhhHHHHHHHHHcCCceEEe--cCcCCCC-CcHHHHHHHHHHHhccccce--eceeccccCCCh
Q 014320 108 IDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI--DFVIPIN-GSLTAGFEAYEKKAKNSCMD--YGFHMAITKWDE 182 (427)
Q Consensus 108 ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~--d~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 182 (427)
||.|+|...+ .|..+.++ ..+.|.+.|++.+. |+..... .....-++...+...+..+. .|.-.....
T Consensus 1 ~D~H~HT~~s-d~~~~~~e---~v~~A~~~Gl~~i~iTdH~~~~~~~~~~~y~~~i~~l~~~~~i~il~GiE~~~~~--- 73 (215)
T PRK08392 1 MDLHTHTVYS-DGIGSVRD---NIAEAERKGLRLVGISDHIHYFTPSKFNAYINEIRQWGEESEIVVLAGIEANITP--- 73 (215)
T ss_pred CccccCCCCc-CCcCCHHH---HHHHHHHcCCCEEEEccCCCccchhhHHHHHHHHHHHhhccCceEEEeEEeeecC---
Confidence 7999998765 24444444 47788899999775 4421111 12222222232222211122 222221111
Q ss_pred hhHHHHHHHHHHcCCCeEEEEEecCCCccC--CHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCccccc
Q 014320 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMI--NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHA 260 (427)
Q Consensus 183 ~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~--~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~ 260 (427)
...+...++.+ ..+.+- .+.|..... -.+.+..+.+.++.....+..|....-.. .+
T Consensus 74 ~~~~~~~~~~~--~~D~vI--~SvH~~~~~~~~~~Y~~~~~~~~~~~~~dvlgH~d~~~~~---------~~-------- 132 (215)
T PRK08392 74 NGVDITDDFAK--KLDYVI--ASVHEWFGRPEHHEYIELVKLALMDENVDIIGHFGNSFPY---------IG-------- 132 (215)
T ss_pred CcchhHHHHHh--hCCEEE--EEeecCcCCcHHHHHHHHHHHHHhcCCCCEEeCCCccccC---------CC--------
Confidence 11223333332 223221 111111111 12445556666666677888885321000 00
Q ss_pred ccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCcc
Q 014320 261 LSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVS 317 (427)
Q Consensus 261 ~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~ 317 (427)
.+. ...+.+.++.+.+.|..+-+.-.......+.++.+++.|++++...-.|
T Consensus 133 --~~~---~~~~~~i~~~~~~~g~~lEiNt~~~~p~~~~l~~~~~~G~~~~igSDAH 184 (215)
T PRK08392 133 --YPS---EEELKEILDLAEAYGKAFEISSRYRVPDLEFIRECIKRGIKLTFASDAH 184 (215)
T ss_pred --Cch---HHHHHHHHHHHHHhCCEEEEeCCCCCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 111 2445677788888887665552111122467888999998887754444
No 153
>PRK12330 oxaloacetate decarboxylase; Provisional
Probab=88.47 E-value=12 Score=37.94 Aligned_cols=126 Identities=13% Similarity=0.047 Sum_probs=69.4
Q ss_pred HHHHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhccccceeceeccccCCChhhHHH-HHHHHHHcCCCeEEEEE
Q 014320 127 FFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDE-MEVMVKEKGINSFKFFM 204 (427)
Q Consensus 127 ~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~g~~~ik~~~ 204 (427)
+....+.+..+|+..++-+-...+. .....++..++.+......+.+..... .+.+...+ .+++. +.|++.|-+-
T Consensus 99 v~~fv~~a~~~Gidi~RIfd~lndv~nl~~ai~~vk~ag~~~~~~i~yt~sp~-~t~e~~~~~a~~l~-~~Gad~I~Ik- 175 (499)
T PRK12330 99 VDRFVEKSAENGMDVFRVFDALNDPRNLEHAMKAVKKVGKHAQGTICYTVSPI-HTVEGFVEQAKRLL-DMGADSICIK- 175 (499)
T ss_pred HHHHHHHHHHcCCCEEEEEecCChHHHHHHHHHHHHHhCCeEEEEEEEecCCC-CCHHHHHHHHHHHH-HcCCCEEEeC-
Confidence 3445677899999998754322221 344455555555543322333322222 23343334 34444 7898876431
Q ss_pred ecCCCccCCHHHHHHHHHHHHHc---CCcEEEecCChhhHHHH-HHHHHHcCCCCcc
Q 014320 205 AYKGSFMINDELLIEGFKRCKSL---GALAMVHAENGDAVFEG-QKRMIELGITGPE 257 (427)
Q Consensus 205 ~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e~~~~~~~~-~~~l~~~G~~~~~ 257 (427)
+.. ...+++...++++..++. ++++.+|+.+....... .-...+.|..-..
T Consensus 176 Dta--Gll~P~~~~~LV~~Lk~~~~~~ipI~~H~Hnt~GlA~An~laAieAGad~vD 230 (499)
T PRK12330 176 DMA--ALLKPQPAYDIVKGIKEACGEDTRINLHCHSTTGVTLVSLMKAIEAGVDVVD 230 (499)
T ss_pred CCc--cCCCHHHHHHHHHHHHHhCCCCCeEEEEeCCCCCcHHHHHHHHHHcCCCEEE
Confidence 222 235788888888888765 68999998766443222 1234566765443
No 154
>PRK14042 pyruvate carboxylase subunit B; Provisional
Probab=86.86 E-value=17 Score=37.82 Aligned_cols=124 Identities=12% Similarity=0.057 Sum_probs=69.9
Q ss_pred HHHHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEe
Q 014320 127 FFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMA 205 (427)
Q Consensus 127 ~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~ 205 (427)
+....+.+..+|+..++-+-..++. +....++..++.+......+.+.... ..+.+...++.+.+.+.|++.|-+. +
T Consensus 98 v~~~v~~a~~~Gidv~Rifd~lnd~~n~~~~i~~~k~~G~~~~~~i~yt~sp-~~t~e~~~~~ak~l~~~Gad~I~Ik-D 175 (596)
T PRK14042 98 VRAFVKLAVNNGVDVFRVFDALNDARNLKVAIDAIKSHKKHAQGAICYTTSP-VHTLDNFLELGKKLAEMGCDSIAIK-D 175 (596)
T ss_pred HHHHHHHHHHcCCCEEEEcccCcchHHHHHHHHHHHHcCCEEEEEEEecCCC-CCCHHHHHHHHHHHHHcCCCEEEeC-C
Confidence 4445778899999999865432222 45556666666664333333333222 2333444444433337888866431 2
Q ss_pred cCCCccCCHHHHHHHHHHHHH-cCCcEEEecCChhhHHHHH-HHHHHcCCC
Q 014320 206 YKGSFMINDELLIEGFKRCKS-LGALAMVHAENGDAVFEGQ-KRMIELGIT 254 (427)
Q Consensus 206 ~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~e~~~~~~~~~-~~l~~~G~~ 254 (427)
.. ...++....++++..++ .++++++|+.+........ -...+.|..
T Consensus 176 ta--G~l~P~~v~~lv~alk~~~~ipi~~H~Hnt~Gla~an~laAieaGad 224 (596)
T PRK14042 176 MA--GLLTPTVTVELYAGLKQATGLPVHLHSHSTSGLASICHYEAVLAGCN 224 (596)
T ss_pred cc--cCCCHHHHHHHHHHHHhhcCCEEEEEeCCCCCcHHHHHHHHHHhCCC
Confidence 22 23578888888877765 5899999987665433221 233456654
No 155
>PRK10657 isoaspartyl dipeptidase; Provisional
Probab=85.94 E-value=3.3 Score=40.59 Aligned_cols=89 Identities=10% Similarity=0.073 Sum_probs=60.2
Q ss_pred CCcccccccCCHHHHHHHHHHHHHHHHhcCCC--EEEEcCC-CHHHHHHHHHH-hhcCCCEEEecCccceeeCcccccCC
Q 014320 254 TGPEGHALSRPPLLEGEATTRAIRLAEFVNTP--LYVVHVM-SMDAMEEIAKA-RKAGQRVIGEPVVSGLVLDDSWLWHS 329 (427)
Q Consensus 254 ~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~--~~i~H~~-~~~~~~~i~~~-~~~G~~v~~~~~p~~l~~~~~~~~~~ 329 (427)
..+..|...++...+...+.+..+.++..+.+ .++.|++ +...++.++++ ++.|+.+.. +|++|+.++.+.
T Consensus 158 ~~~~~~~~~~~~~~~l~~~~~~a~~~~~~~g~~~~i~vH~~~~~~~l~~v~~~l~~~Gv~~~~-~~~~H~~~~~~~---- 232 (388)
T PRK10657 158 IAISDHRSSQPTVEELARLAAEARVGGLLSGKAGIVHVHMGDGKKGLQPLFELLENTDIPISQ-FLPTHVNRNEPL---- 232 (388)
T ss_pred eeeccCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEEEEeCCchHHHHHHHHHHHhcCCCcce-eeCcccCCCHHH----
Confidence 34455666677777777777777776665543 7899988 46778888544 688988885 899887653321
Q ss_pred CcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEec
Q 014320 330 DFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGT 366 (427)
Q Consensus 330 ~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgS 366 (427)
.+..++.++.|....+..
T Consensus 233 -------------------~~~~~~~~~~G~~~~v~~ 250 (388)
T PRK10657 233 -------------------FEQALEFAKKGGVIDLTT 250 (388)
T ss_pred -------------------HHHHHHHHHcCCeEEEec
Confidence 123566777788766554
No 156
>PRK12581 oxaloacetate decarboxylase; Provisional
Probab=85.80 E-value=24 Score=35.45 Aligned_cols=125 Identities=12% Similarity=0.047 Sum_probs=68.9
Q ss_pred HHHHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhccccceeceeccccCCChhhHHH-HHHHHHHcCCCeEEEEE
Q 014320 127 FFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDE-MEVMVKEKGINSFKFFM 204 (427)
Q Consensus 127 ~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~g~~~ik~~~ 204 (427)
+....+.+..+|+..++-+...... .....++..++.+.......++.... ..+.+...+ .+++. +.|++.|-+.
T Consensus 107 v~~fv~~a~~~Gidi~Rifd~lnd~~n~~~ai~~ak~~G~~~~~~i~yt~sp-~~t~~y~~~~a~~l~-~~Gad~I~Ik- 183 (468)
T PRK12581 107 VDKFISLSAQNGIDVFRIFDALNDPRNIQQALRAVKKTGKEAQLCIAYTTSP-VHTLNYYLSLVKELV-EMGADSICIK- 183 (468)
T ss_pred HHHHHHHHHHCCCCEEEEcccCCCHHHHHHHHHHHHHcCCEEEEEEEEEeCC-cCcHHHHHHHHHHHH-HcCCCEEEEC-
Confidence 3344677899999999865432222 45556666666554332333332221 223333333 34444 7888876431
Q ss_pred ecCCCccCCHHHHHHHHHHHHHc-CCcEEEecCChhhHHHH-HHHHHHcCCCCc
Q 014320 205 AYKGSFMINDELLIEGFKRCKSL-GALAMVHAENGDAVFEG-QKRMIELGITGP 256 (427)
Q Consensus 205 ~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~e~~~~~~~~-~~~l~~~G~~~~ 256 (427)
+.. ...+++...++++..++. ++++.+|+.+....... .-...+.|....
T Consensus 184 Dta--G~l~P~~v~~Lv~alk~~~~~pi~~H~Hnt~GlA~An~laAieAGad~v 235 (468)
T PRK12581 184 DMA--GILTPKAAKELVSGIKAMTNLPLIVHTHATSGISQMTYLAAVEAGADRI 235 (468)
T ss_pred CCC--CCcCHHHHHHHHHHHHhccCCeEEEEeCCCCccHHHHHHHHHHcCCCEE
Confidence 222 235788888888877664 68899998665443222 123446666433
No 157
>PRK01060 endonuclease IV; Provisional
Probab=85.71 E-value=30 Score=32.05 Aligned_cols=113 Identities=17% Similarity=0.161 Sum_probs=67.4
Q ss_pred HHHHHHHHcCCCeEEEEEecCC---CccCCHHHHHHHHHHHHHcCCc---EEEecCChhhHHHHHHHHHHcCCCCccccc
Q 014320 187 EMEVMVKEKGINSFKFFMAYKG---SFMINDELLIEGFKRCKSLGAL---AMVHAENGDAVFEGQKRMIELGITGPEGHA 260 (427)
Q Consensus 187 ~~~~l~~~~g~~~ik~~~~~~~---~~~~~~~~l~~~~~~a~~~g~~---v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~ 260 (427)
+.-+.+++.|.+++.+++.... ....+++.++++.+.++++|+. +.+|+--.-.. ..
T Consensus 16 ~~l~~~~~~G~d~vEl~~~~p~~~~~~~~~~~~~~~lk~~~~~~gl~~~~~~~h~~~~~nl------------~~----- 78 (281)
T PRK01060 16 GAVAEAAEIGANAFMIFTGNPQQWKRKPLEELNIEAFKAACEKYGISPEDILVHAPYLINL------------GN----- 78 (281)
T ss_pred HHHHHHHHcCCCEEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCCCCceEEecceEecC------------CC-----
Confidence 3333344789999999876332 1245788899999999999998 88886321000 00
Q ss_pred ccCCH--HHHHHHHHHHHHHHHhcCCCEEEEcCCCH------H-H----HHHHHHH--hhcCCCEEEecCcc
Q 014320 261 LSRPP--LLEGEATTRAIRLAEFVNTPLYVVHVMSM------D-A----MEEIAKA--RKAGQRVIGEPVVS 317 (427)
Q Consensus 261 ~~~p~--~~e~~a~~~~~~~~~~~g~~~~i~H~~~~------~-~----~~~i~~~--~~~G~~v~~~~~p~ 317 (427)
..|. ....+.+.+.++.+.+.|++..+.|.... + . .+.++.+ ...|+.+..|..|.
T Consensus 79 -~d~~~r~~s~~~~~~~i~~A~~lga~~vv~h~G~~~~~~~~~~~~~~~~e~l~~l~~~~~gv~l~iEn~~~ 149 (281)
T PRK01060 79 -PNKEILEKSRDFLIQEIERCAALGAKLLVFHPGSHLGDIDEEDCLARIAESLNEALDKTQGVTIVLENTAG 149 (281)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCCcCCCCCcHHHHHHHHHHHHHHHHhcCCCCEEEEecCCC
Confidence 0000 01235567788888888888777776421 1 1 1233332 34577788877653
No 158
>smart00518 AP2Ec AP endonuclease family 2. These endonucleases play a role in DNA repair. Cleave phosphodiester bonds at apurinic or apyrimidinic sites
Probab=84.70 E-value=33 Score=31.63 Aligned_cols=112 Identities=19% Similarity=0.144 Sum_probs=66.3
Q ss_pred HHHHHHHHHcCCCeEEEEEecCCCc---cCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCccccccc
Q 014320 186 DEMEVMVKEKGINSFKFFMAYKGSF---MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALS 262 (427)
Q Consensus 186 ~~~~~l~~~~g~~~ik~~~~~~~~~---~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~ 262 (427)
+.+.+.. +.|.+.+.+++...... ..+++.+.++.+.++++|+.+.+|+...... .+ .
T Consensus 14 ~~~~~~~-~~G~~~vel~~~~~~~~~~~~~~~~~~~~l~~~~~~~gl~ls~h~p~~~nl------------~s------~ 74 (273)
T smart00518 14 KAFIEAV-DIGARSFQLFLGNPRSWKGVRLSEETAEKFKEALKENNIDVSVHAPYLINL------------AS------P 74 (273)
T ss_pred HHHHHHH-HcCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHcCCCEEEECCceecC------------CC------C
Confidence 3455555 78888888887654222 3677888888888999999999996211000 00 0
Q ss_pred CCHH--HHHHHHHHHHHHHHhcCCCEEEEcCCC------HHH----HHHHHHHh--hcCCCEEEecCc
Q 014320 263 RPPL--LEGEATTRAIRLAEFVNTPLYVVHVMS------MDA----MEEIAKAR--KAGQRVIGEPVV 316 (427)
Q Consensus 263 ~p~~--~e~~a~~~~~~~~~~~g~~~~i~H~~~------~~~----~~~i~~~~--~~G~~v~~~~~p 316 (427)
.|.. ...+.+.+.++.+...|++..+.|... .+. .+.++++. +.|+.+..|..|
T Consensus 75 d~~~r~~~~~~l~~~i~~A~~lGa~~vv~h~g~~~~~~~e~~~~~~~~~l~~l~~~~~gv~l~lEn~~ 142 (273)
T smart00518 75 DKEKVEKSIERLIDEIKRCEELGIKALVFHPGSYLKQSKEEALNRIIESLNEVIDETKGVVILLETTA 142 (273)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCCCHHHHHHHHHHHHHHHHhccCCcEEEEeccC
Confidence 0111 123456778888888888877777632 111 11222222 357777777665
No 159
>PRK08508 biotin synthase; Provisional
Probab=84.26 E-value=10 Score=35.42 Aligned_cols=126 Identities=16% Similarity=0.016 Sum_probs=63.2
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccc
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHAL 261 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~ 261 (427)
++.++.+++.. ..|+..+-+..+..+......+.+.++++..++.+..+.+|+.......+..+++.+.|+....+...
T Consensus 43 eeI~~~a~~a~-~~g~~~~~lv~sg~~~~~~~~e~~~ei~~~ik~~~p~l~i~~s~G~~~~e~l~~Lk~aGld~~~~~lE 121 (279)
T PRK08508 43 EQIVQEAKMAK-ANGALGFCLVTSGRGLDDKKLEYVAEAAKAVKKEVPGLHLIACNGTASVEQLKELKKAGIFSYNHNLE 121 (279)
T ss_pred HHHHHHHHHHH-HCCCCEEEEEeccCCCCcccHHHHHHHHHHHHhhCCCcEEEecCCCCCHHHHHHHHHcCCCEEccccc
Confidence 33444444433 45666554432222222224456667777777665556666433333445556677777644332211
Q ss_pred c--------CCHHHHHHHHHHHHHHHHhcCCC----EEEEcCCCHH-HHHHHHHHhhcCCC
Q 014320 262 S--------RPPLLEGEATTRAIRLAEFVNTP----LYVVHVMSMD-AMEEIAKARKAGQR 309 (427)
Q Consensus 262 ~--------~p~~~e~~a~~~~~~~~~~~g~~----~~i~H~~~~~-~~~~i~~~~~~G~~ 309 (427)
+ .+. ...+...+.++.+++.|.+ +.+.|..+.+ -++.+..+++.+..
T Consensus 122 t~~~~~~~i~~~-~~~~~~l~~i~~a~~~Gi~v~sg~I~GlGEt~ed~~~~l~~lr~L~~~ 181 (279)
T PRK08508 122 TSKEFFPKICTT-HTWEERFQTCENAKEAGLGLCSGGIFGLGESWEDRISFLKSLASLSPH 181 (279)
T ss_pred chHHHhcCCCCC-CCHHHHHHHHHHHHHcCCeecceeEEecCCCHHHHHHHHHHHHcCCCC
Confidence 1 111 1233444555666666654 3455554433 35667777776654
No 160
>TIGR01496 DHPS dihydropteroate synthase. This model represents dihydropteroate synthase, the enzyme that catalyzes the second to last step in folic acid biosynthesis. The gene is usually designated folP (folic acid biosynthsis) or sul (sulfanilamide resistance). This model represents one branch of the family of pterin-binding enzymes (pfam00809) and of a cluster of dihydropteroate synthase and related enzymes (COG0294). Other members of pfam00809 and COG0294 are represented by TIGR00284.
Probab=82.45 E-value=17 Score=33.41 Aligned_cols=63 Identities=13% Similarity=0.086 Sum_probs=42.4
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEec--CCCccCCH-HH---HHHHHHHHHHc-CCcEEEecCChhhHHHHH
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAY--KGSFMIND-EL---LIEGFKRCKSL-GALAMVHAENGDAVFEGQ 245 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~--~~~~~~~~-~~---l~~~~~~a~~~-g~~v~~H~e~~~~~~~~~ 245 (427)
++..+..+++. +.|++.|++.... .+....++ ++ +..+++.+++. ++++.+|..+.+.++.+.
T Consensus 23 ~~~~~~a~~~~-~~GA~iIDIG~~st~p~~~~i~~~~E~~rl~~~v~~~~~~~~~plsiDT~~~~vi~~al 92 (257)
T TIGR01496 23 DKAVAHAERML-EEGADIIDVGGESTRPGADRVSPEEELNRVVPVIKALRDQPDVPISVDTYRAEVARAAL 92 (257)
T ss_pred HHHHHHHHHHH-HCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEeCCCHHHHHHHH
Confidence 45566667776 7999999985322 12222333 34 77778888876 999999998887665443
No 161
>PRK12331 oxaloacetate decarboxylase; Provisional
Probab=81.75 E-value=33 Score=34.42 Aligned_cols=123 Identities=16% Similarity=0.068 Sum_probs=64.6
Q ss_pred HHHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhccccceeceeccccCCChhhHHH-HHHHHHHcCCCeEEEEEe
Q 014320 128 FSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDE-MEVMVKEKGINSFKFFMA 205 (427)
Q Consensus 128 ~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~g~~~ik~~~~ 205 (427)
....+.++.+|+..++-+...... +....++..++.+......+.+... ...+.+...+ .+++. +.|++.|-+. +
T Consensus 99 ~~~v~~A~~~Gvd~irif~~lnd~~n~~~~v~~ak~~G~~v~~~i~~t~~-p~~~~~~~~~~a~~l~-~~Gad~I~i~-D 175 (448)
T PRK12331 99 ESFVQKSVENGIDIIRIFDALNDVRNLETAVKATKKAGGHAQVAISYTTS-PVHTIDYFVKLAKEMQ-EMGADSICIK-D 175 (448)
T ss_pred HHHHHHHHHCCCCEEEEEEecCcHHHHHHHHHHHHHcCCeEEEEEEeecC-CCCCHHHHHHHHHHHH-HcCCCEEEEc-C
Confidence 334577889999987754322211 3444444444444322222222222 1223333333 44444 7888876432 2
Q ss_pred cCCCccCCHHHHHHHHHHHHH-cCCcEEEecCChhhHHHHH-HHHHHcCCCC
Q 014320 206 YKGSFMINDELLIEGFKRCKS-LGALAMVHAENGDAVFEGQ-KRMIELGITG 255 (427)
Q Consensus 206 ~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~e~~~~~~~~~-~~l~~~G~~~ 255 (427)
.. ...++....++++..++ .++++.+|+.+........ -...+.|...
T Consensus 176 t~--G~l~P~~v~~lv~alk~~~~~pi~~H~Hnt~GlA~AN~laAieaGad~ 225 (448)
T PRK12331 176 MA--GILTPYVAYELVKRIKEAVTVPLEVHTHATSGIAEMTYLKAIEAGADI 225 (448)
T ss_pred CC--CCCCHHHHHHHHHHHHHhcCCeEEEEecCCCCcHHHHHHHHHHcCCCE
Confidence 22 23578888888887765 5789999987665432221 2344666643
No 162
>PRK08609 hypothetical protein; Provisional
Probab=81.42 E-value=67 Score=33.39 Aligned_cols=47 Identities=23% Similarity=0.167 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhcCCCEEEEcCCC--HHHHHHHHHHhhcCCCEEEecCcc
Q 014320 271 ATTRAIRLAEFVNTPLYVVHVMS--MDAMEEIAKARKAGQRVIGEPVVS 317 (427)
Q Consensus 271 a~~~~~~~~~~~g~~~~i~H~~~--~~~~~~i~~~~~~G~~v~~~~~p~ 317 (427)
.+.+.++.+.+.|+.+-+.-.+. ....+.++.+++.|+.++...-.|
T Consensus 480 d~~~i~~~a~~~G~~lEINa~~~r~~~~~~~~~~~~e~Gv~i~igSDAH 528 (570)
T PRK08609 480 NIDQLIELAKETNTALELNANPNRLDLSAEHLKKAQEAGVKLAINTDAH 528 (570)
T ss_pred HHHHHHHHHHHhCCEEEEcCCccccCccHHHHHHHHHcCCEEEEECCCC
Confidence 35666777777887655543221 112467888999998877755544
No 163
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=79.61 E-value=29 Score=32.47 Aligned_cols=111 Identities=13% Similarity=0.011 Sum_probs=62.3
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccccCCHHHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHALSRPPLLE 268 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e 268 (427)
+.|++++-+.........++.++-.++++.+.+. ++++.+|+. +.+...+..+.+++.|....-..+.......+
T Consensus 33 ~~Gv~gi~~~Gs~GE~~~ls~~Er~~~~~~~~~~~~~~~~vi~gv~~~~~~~~i~~a~~a~~~G~d~v~~~pP~~~~~~~ 112 (292)
T PRK03170 33 ANGTDGLVVVGTTGESPTLTHEEHEELIRAVVEAVNGRVPVIAGTGSNSTAEAIELTKFAEKAGADGALVVTPYYNKPTQ 112 (292)
T ss_pred HcCCCEEEECCcCCccccCCHHHHHHHHHHHHHHhCCCCcEEeecCCchHHHHHHHHHHHHHcCCCEEEECCCcCCCCCH
Confidence 6888887654444444567888888877766553 478888863 34444444567778887644332221111112
Q ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCH----HHHHHHHHHh
Q 014320 269 GEATTRAIRLAEFVNTPLYVVHVMSM----DAMEEIAKAR 304 (427)
Q Consensus 269 ~~a~~~~~~~~~~~g~~~~i~H~~~~----~~~~~i~~~~ 304 (427)
...+....+++...+.++.+-|.... -+.+.++++.
T Consensus 113 ~~i~~~~~~ia~~~~~pv~lYn~P~~~g~~l~~~~~~~L~ 152 (292)
T PRK03170 113 EGLYQHFKAIAEATDLPIILYNVPGRTGVDILPETVARLA 152 (292)
T ss_pred HHHHHHHHHHHhcCCCCEEEEECccccCCCCCHHHHHHHH
Confidence 22333333445556778877776431 1245566553
No 164
>PRK09248 putative hydrolase; Validated
Probab=79.09 E-value=50 Score=29.99 Aligned_cols=34 Identities=24% Similarity=0.240 Sum_probs=24.2
Q ss_pred ccccccccccCcCCCCChhhHHHHHHHHHcCCceEEe
Q 014320 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (427)
Q Consensus 107 ~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~ 143 (427)
++|.|+|......+..+.+++ .+.|.+.|.+++.
T Consensus 4 ~~D~H~HT~~s~~~~~~~~e~---v~~A~~~G~~~i~ 37 (246)
T PRK09248 4 PVDTHTHTIASGHAYSTLHEN---AAEAKQKGLKLFA 37 (246)
T ss_pred ceEeCcCCCCCCCCCCCHHHH---HHHHHHCCCCEEE
Confidence 689999987653233344444 7788899999887
No 165
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=79.08 E-value=34 Score=31.81 Aligned_cols=112 Identities=13% Similarity=0.069 Sum_probs=63.9
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccccCCHHHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHALSRPPLLE 268 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e 268 (427)
..|++++-+.-+......++.++-+++++.+.+. .+++.+|+. +..+..+..+++++.|....-..+.......+
T Consensus 29 ~~Gv~gi~~~GstGE~~~ls~~Er~~l~~~~~~~~~~~~~vi~gv~~~~~~~~i~~a~~a~~~Gad~v~v~pP~y~~~~~ 108 (281)
T cd00408 29 EAGVDGLVVLGTTGEAPTLTDEERKEVIEAVVEAVAGRVPVIAGVGANSTREAIELARHAEEAGADGVLVVPPYYNKPSQ 108 (281)
T ss_pred HcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHhCCCCeEEEecCCccHHHHHHHHHHHHHcCCCEEEECCCcCCCCCH
Confidence 6788887655444445667888888887776553 578888863 33344444467778887654433321111122
Q ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCHH----HHHHHHHHhh
Q 014320 269 GEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (427)
Q Consensus 269 ~~a~~~~~~~~~~~g~~~~i~H~~~~~----~~~~i~~~~~ 305 (427)
...+.-...++...+.++.+-|..... +.+.++++.+
T Consensus 109 ~~~~~~~~~ia~~~~~pi~iYn~P~~tg~~l~~~~~~~L~~ 149 (281)
T cd00408 109 EGIVAHFKAVADASDLPVILYNIPGRTGVDLSPETIARLAE 149 (281)
T ss_pred HHHHHHHHHHHhcCCCCEEEEECccccCCCCCHHHHHHHhc
Confidence 233333344444567888777765421 2455666543
No 166
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=78.95 E-value=35 Score=32.37 Aligned_cols=109 Identities=12% Similarity=-0.002 Sum_probs=63.7
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHH---cCCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc--cCCHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~--~~p~~ 266 (427)
..|++++-+.-+....+.++.++-+++++.+.+ .+++|.+|+. +.+...+..+.+++.|....-..+. ..++.
T Consensus 40 ~~Gv~Gi~v~GstGE~~~Lt~eEr~~v~~~~~~~~~grvpvi~Gv~~~~t~~ai~~a~~A~~~Gad~vlv~~P~y~~~~~ 119 (309)
T cd00952 40 AAGVDGILTMGTFGECATLTWEEKQAFVATVVETVAGRVPVFVGATTLNTRDTIARTRALLDLGADGTMLGRPMWLPLDV 119 (309)
T ss_pred HcCCCEEEECcccccchhCCHHHHHHHHHHHHHHhCCCCCEEEEeccCCHHHHHHHHHHHHHhCCCEEEECCCcCCCCCH
Confidence 688988866555455567888888888776654 2478888863 4445555556777888765433222 12322
Q ss_pred HHHHHHHHHHHHHHhc-CCCEEEEcCCCHH----HHHHHHHHh
Q 014320 267 LEGEATTRAIRLAEFV-NTPLYVVHVMSMD----AMEEIAKAR 304 (427)
Q Consensus 267 ~e~~a~~~~~~~~~~~-g~~~~i~H~~~~~----~~~~i~~~~ 304 (427)
.+ -+.-.-.++... +.++.+-|..... ..+.++++.
T Consensus 120 ~~--l~~yf~~va~a~~~lPv~iYn~P~~tg~~l~~~~l~~L~ 160 (309)
T cd00952 120 DT--AVQFYRDVAEAVPEMAIAIYANPEAFKFDFPRAAWAELA 160 (309)
T ss_pred HH--HHHHHHHHHHhCCCCcEEEEcCchhcCCCCCHHHHHHHh
Confidence 22 222233344446 5788888775321 245566554
No 167
>PRK07709 fructose-bisphosphate aldolase; Provisional
Probab=78.81 E-value=57 Score=30.49 Aligned_cols=49 Identities=14% Similarity=0.142 Sum_probs=33.6
Q ss_pred HHHHHHHHHHcCCCeEEEEEec-C----CCccCCHHHHHHHHHHHHHcCCcEEEecC
Q 014320 185 SDEMEVMVKEKGINSFKFFMAY-K----GSFMINDELLIEGFKRCKSLGALAMVHAE 236 (427)
Q Consensus 185 ~~~~~~l~~~~g~~~ik~~~~~-~----~~~~~~~~~l~~~~~~a~~~g~~v~~H~e 236 (427)
.++..+.+++-|++.+-+.++. | +.+.++.+.|+++.+ +.++|+..|-.
T Consensus 158 peeA~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~L~~~~L~~I~~---~~~iPLVLHGg 211 (285)
T PRK07709 158 PAECKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRD---FTGVPLVLHGG 211 (285)
T ss_pred HHHHHHHHHHhCCCEEEEeecccccCcCCCCccCHHHHHHHHH---HHCCCEEEeCC
Confidence 4566777767899988766542 3 335567777777643 45999999953
No 168
>PF03932 CutC: CutC family; InterPro: IPR005627 Copper transport in Escherichia coli is mediated by the products of at least six genes, cutA, cutB, cutC, cutD, cutE, and cutF. A mutation in one or more of these genes results in an increased copper sensitivity. Members of this family are between 200 and 300 amino acids in length and are found in both eukaryotes and bacteria.; GO: 0005507 copper ion binding, 0055070 copper ion homeostasis; PDB: 2BDQ_A 3IWP_I 1X8C_B 1X7I_A 1TWD_B.
Probab=78.70 E-value=46 Score=29.33 Aligned_cols=118 Identities=19% Similarity=0.102 Sum_probs=53.4
Q ss_pred HHHHHHcCCceEEec---CcCCCCCcHHHHHHHHHHHhccccceece--eccccCCChhhHHHH----HHHHHHcCCCeE
Q 014320 130 GQAAALAGGTTMHID---FVIPINGSLTAGFEAYEKKAKNSCMDYGF--HMAITKWDEVVSDEM----EVMVKEKGINSF 200 (427)
Q Consensus 130 ~~~~~l~~GvTtv~d---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~----~~l~~~~g~~~i 200 (427)
.+..+.++|..-+-= +...+.++....++...+. ...++..-+ ..+....+++.++.| +.+. +.|+++|
T Consensus 12 ~a~~A~~~GAdRiELc~~l~~GGlTPS~g~i~~~~~~-~~ipv~vMIRpr~gdF~Ys~~E~~~M~~dI~~~~-~~GadG~ 89 (201)
T PF03932_consen 12 DALAAEAGGADRIELCSNLEVGGLTPSLGLIRQAREA-VDIPVHVMIRPRGGDFVYSDEEIEIMKEDIRMLR-ELGADGF 89 (201)
T ss_dssp HHHHHHHTT-SEEEEEBTGGGT-B---HHHHHHHHHH-TTSEEEEE--SSSS-S---HHHHHHHHHHHHHHH-HTT-SEE
T ss_pred HHHHHHHcCCCEEEECCCccCCCcCcCHHHHHHHHhh-cCCceEEEECCCCCCccCCHHHHHHHHHHHHHHH-HcCCCee
Confidence 356677888877652 2111112344455544442 122222211 111111233333333 3333 6899987
Q ss_pred EEEE-ecCCCccCCHHHHHHHHHHHHHcCCcEEEe-cCCh-hhHHHHHHHHHHcCC
Q 014320 201 KFFM-AYKGSFMINDELLIEGFKRCKSLGALAMVH-AENG-DAVFEGQKRMIELGI 253 (427)
Q Consensus 201 k~~~-~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H-~e~~-~~~~~~~~~l~~~G~ 253 (427)
-+.. +.. ..++.+.++++++.|+ ++++..| +-+. .......+.+.+.|+
T Consensus 90 VfG~L~~d--g~iD~~~~~~Li~~a~--~~~~tFHRAfD~~~d~~~al~~L~~lG~ 141 (201)
T PF03932_consen 90 VFGALTED--GEIDEEALEELIEAAG--GMPVTFHRAFDEVPDPEEALEQLIELGF 141 (201)
T ss_dssp EE--BETT--SSB-HHHHHHHHHHHT--TSEEEE-GGGGGSSTHHHHHHHHHHHT-
T ss_pred EEEeECCC--CCcCHHHHHHHHHhcC--CCeEEEeCcHHHhCCHHHHHHHHHhcCC
Confidence 5533 333 3478999999999986 9999999 4332 223333344444444
No 169
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=78.04 E-value=31 Score=32.11 Aligned_cols=102 Identities=16% Similarity=0.106 Sum_probs=57.8
Q ss_pred HHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc-
Q 014320 188 MEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL- 261 (427)
Q Consensus 188 ~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~- 261 (427)
++.++ +.|++++-+.-+......++.++.+++++.+.+. ++++.+++. +..+..+..+.+++.|..+.-..+.
T Consensus 27 i~~l~-~~Gv~gl~v~GstGE~~~lt~~Er~~l~~~~~~~~~~~~~vi~gv~~~~~~~~~~~a~~a~~~G~d~v~~~~P~ 105 (284)
T cd00950 27 IEFQI-ENGTDGLVVCGTTGESPTLSDEEHEAVIEAVVEAVNGRVPVIAGTGSNNTAEAIELTKRAEKAGADAALVVTPY 105 (284)
T ss_pred HHHHH-HcCCCEEEECCCCcchhhCCHHHHHHHHHHHHHHhCCCCcEEeccCCccHHHHHHHHHHHHHcCCCEEEEcccc
Confidence 33344 6788887554333344567888888888776654 467888863 3444444456677888764432222
Q ss_pred c-CCHHHHHHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 262 S-RPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 262 ~-~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
. .+.. ...+.-..+++...+.++.+-+..
T Consensus 106 ~~~~~~--~~l~~~~~~ia~~~~~pi~lYn~P 135 (284)
T cd00950 106 YNKPSQ--EGLYAHFKAIAEATDLPVILYNVP 135 (284)
T ss_pred cCCCCH--HHHHHHHHHHHhcCCCCEEEEECh
Confidence 1 2222 222233333444467788777764
No 170
>cd01301 rDP_like renal dipeptidase (rDP), best studied in mammals and also called membrane or microsomal dipeptidase, is a membrane-bound glycoprotein hydrolyzing dipeptides and is involved in hydrolytic metabolism of penem and carbapenem beta-lactam antibiotics. Although the biological function of the enzyme is still unknown, it has been suggested to play a role in the renal glutathione metabolism.
Probab=77.90 E-value=64 Score=30.58 Aligned_cols=52 Identities=12% Similarity=0.227 Sum_probs=33.6
Q ss_pred ceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 361 LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 361 ~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
.+.||||..-.. ..+.|+.... .+|.+...+. +.+++-+++-+++-.|+-|+
T Consensus 258 hVgiGsDfdg~~------------~~~~gl~~~~-~~~~l~~~L~-~rG~s~~~i~~i~g~N~lRv 309 (309)
T cd01301 258 HVGLGSDFDGIG------------GTPGGLEDVS-DLPNLTAELL-ERGYSEEEIEKIAGGNFLRV 309 (309)
T ss_pred eEEECcccCCCC------------CCccccCCHH-HHHHHHHHHH-HcCCCHHHHHHHHhhchhcC
Confidence 488888853221 1234454443 6676664444 46799999999999998663
No 171
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=77.72 E-value=63 Score=30.36 Aligned_cols=112 Identities=7% Similarity=-0.091 Sum_probs=60.6
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecCC-hhhHHHHHHHHHHcCCCCcccccccCCHHHHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAEN-GDAVFEGQKRMIELGITGPEGHALSRPPLLEG 269 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e~-~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~ 269 (427)
..|++++-+.-+....+.++.++-+++++.+.+. .+++.+|+.. ..+..+..+++++.|....-..+.......+.
T Consensus 37 ~~Gv~gi~v~GstGE~~~Lt~eEr~~v~~~~~~~~~g~~pvi~gv~~~t~~ai~~a~~a~~~Gadav~~~pP~y~~~s~~ 116 (296)
T TIGR03249 37 GYGLEALFAAGGTGEFFSLTPAEYEQVVEIAVSTAKGKVPVYTGVGGNTSDAIEIARLAEKAGADGYLLLPPYLINGEQE 116 (296)
T ss_pred hcCCCEEEECCCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCccHHHHHHHHHHHHHhCCCEEEECCCCCCCCCHH
Confidence 6899988665444445678888888888876553 4788888642 22222333566777875443222211111122
Q ss_pred HHHHHHHHHHHhcCCCEEEEcCCC-HHHHHHHHHHhh
Q 014320 270 EATTRAIRLAEFVNTPLYVVHVMS-MDAMEEIAKARK 305 (427)
Q Consensus 270 ~a~~~~~~~~~~~g~~~~i~H~~~-~~~~~~i~~~~~ 305 (427)
.-+.-...++...+.++.+-|.+. .-+.+.+.++.+
T Consensus 117 ~i~~~f~~v~~a~~~pvilYn~~g~~l~~~~~~~La~ 153 (296)
T TIGR03249 117 GLYAHVEAVCESTDLGVIVYQRDNAVLNADTLERLAD 153 (296)
T ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHh
Confidence 222333334444567877776432 112455666543
No 172
>PRK14041 oxaloacetate decarboxylase; Provisional
Probab=77.08 E-value=38 Score=34.14 Aligned_cols=127 Identities=14% Similarity=0.038 Sum_probs=64.0
Q ss_pred hhh-HHHHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHcCCCeEE
Q 014320 124 IDD-FFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFK 201 (427)
Q Consensus 124 ~e~-~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik 201 (427)
+++ +....+.++.+|+..++-+....+. .....++..++.+........+... ...+.+...++.+.+.+.|++.|-
T Consensus 93 ~dDvv~~fv~~A~~~Gvd~irif~~lnd~~n~~~~i~~ak~~G~~v~~~i~~t~~-p~~t~e~~~~~a~~l~~~Gad~I~ 171 (467)
T PRK14041 93 ADDVVELFVKKVAEYGLDIIRIFDALNDIRNLEKSIEVAKKHGAHVQGAISYTVS-PVHTLEYYLEFARELVDMGVDSIC 171 (467)
T ss_pred cchhhHHHHHHHHHCCcCEEEEEEeCCHHHHHHHHHHHHHHCCCEEEEEEEeccC-CCCCHHHHHHHHHHHHHcCCCEEE
Confidence 444 3334677889999987744222111 3334444444443221111111111 122333333433333368888764
Q ss_pred EEEecCCCccCCHHHHHHHHHHHHH-cCCcEEEecCChhhHHHHH-HHHHHcCCC
Q 014320 202 FFMAYKGSFMINDELLIEGFKRCKS-LGALAMVHAENGDAVFEGQ-KRMIELGIT 254 (427)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~e~~~~~~~~~-~~l~~~G~~ 254 (427)
+. +.. ...++....++++..++ .++++.+|+.+........ -...+.|..
T Consensus 172 i~-Dt~--G~l~P~~v~~Lv~~lk~~~~vpI~~H~Hnt~GlA~AN~laAieaGad 223 (467)
T PRK14041 172 IK-DMA--GLLTPKRAYELVKALKKKFGVPVEVHSHCTTGLASLAYLAAVEAGAD 223 (467)
T ss_pred EC-Ccc--CCcCHHHHHHHHHHHHHhcCCceEEEecCCCCcHHHHHHHHHHhCCC
Confidence 31 222 23578888888887765 5789999987665432221 233466654
No 173
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=76.38 E-value=70 Score=30.19 Aligned_cols=109 Identities=8% Similarity=-0.020 Sum_probs=61.1
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC-ChhhHHHHHHHHHHcCCCCccccccc--CCHHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE-NGDAVFEGQKRMIELGITGPEGHALS--RPPLL 267 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e-~~~~~~~~~~~l~~~G~~~~~~~~~~--~p~~~ 267 (427)
..|++++-+.-+......++.++-+++++.+.+. .++|.+++. +..+..+..+++++.|....-..+.. .|..
T Consensus 39 ~~Gv~Gi~~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~gv~~~t~~~i~~~~~a~~~Gadav~~~pP~y~~~~~- 117 (303)
T PRK03620 39 PYGAAALFAAGGTGEFFSLTPDEYSQVVRAAVETTAGRVPVIAGAGGGTAQAIEYAQAAERAGADGILLLPPYLTEAPQ- 117 (303)
T ss_pred HcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCCHHHHHHHHHHHHHhCCCEEEECCCCCCCCCH-
Confidence 6788888655444445667888888887766442 478888863 22233333456777787554332222 2322
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCH-HHHHHHHHHh
Q 014320 268 EGEATTRAIRLAEFVNTPLYVVHVMSM-DAMEEIAKAR 304 (427)
Q Consensus 268 e~~a~~~~~~~~~~~g~~~~i~H~~~~-~~~~~i~~~~ 304 (427)
..-+.-...++...+.++.+-+.+.. -+.+.+.++.
T Consensus 118 -~~i~~~f~~va~~~~lpi~lYn~~g~~l~~~~l~~L~ 154 (303)
T PRK03620 118 -EGLAAHVEAVCKSTDLGVIVYNRDNAVLTADTLARLA 154 (303)
T ss_pred -HHHHHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHH
Confidence 22233333445556788877775421 1245565554
No 174
>PRK12738 kbaY tagatose-bisphosphate aldolase; Reviewed
Probab=75.98 E-value=67 Score=30.04 Aligned_cols=49 Identities=18% Similarity=0.208 Sum_probs=32.6
Q ss_pred HHHHHHHHHHcCCCeEEEEEec-CCC----ccCCHHHHHHHHHHHHHcCCcEEEecC
Q 014320 185 SDEMEVMVKEKGINSFKFFMAY-KGS----FMINDELLIEGFKRCKSLGALAMVHAE 236 (427)
Q Consensus 185 ~~~~~~l~~~~g~~~ik~~~~~-~~~----~~~~~~~l~~~~~~a~~~g~~v~~H~e 236 (427)
.++..+++++-|++.+-+.++. ||. +.++-+.++++-+ ..++|+..|-.
T Consensus 157 peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ldfd~l~~I~~---~~~vPLVLHGg 210 (286)
T PRK12738 157 PQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIRE---VVDVPLVLHGA 210 (286)
T ss_pred HHHHHHHHHHhCCCEEEeccCcccCCCCCCCcCCHHHHHHHHH---HhCCCEEEeCC
Confidence 4566777767799988766542 333 4456666666644 45899999953
No 175
>PRK15108 biotin synthase; Provisional
Probab=75.91 E-value=41 Score=32.49 Aligned_cols=121 Identities=12% Similarity=-0.011 Sum_probs=67.1
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCc-----
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGP----- 256 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~----- 256 (427)
++..+..+... ..|+..+-+..++..+...+.+.+.++++.+++.++.+.++.. ....+..++|.+.|+...
T Consensus 79 eEI~~~a~~~~-~~G~~~i~i~~~g~~p~~~~~e~i~~~i~~ik~~~i~v~~s~G--~ls~e~l~~LkeAGld~~n~~le 155 (345)
T PRK15108 79 EQVLESARKAK-AAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLETCMTLG--TLSESQAQRLANAGLDYYNHNLD 155 (345)
T ss_pred HHHHHHHHHHH-HcCCCEEEEEecCCCCCcchHHHHHHHHHHHHhCCCEEEEeCC--cCCHHHHHHHHHcCCCEEeeccc
Confidence 34444444433 5788777443333333344568888999999888887765532 122555678888888722
Q ss_pred ---ccccccCCHHHHHHHHHHHHHHHHhcCCC----EEEEcCCCH-HHHHHHHHHhhc
Q 014320 257 ---EGHALSRPPLLEGEATTRAIRLAEFVNTP----LYVVHVMSM-DAMEEIAKARKA 306 (427)
Q Consensus 257 ---~~~~~~~p~~~e~~a~~~~~~~~~~~g~~----~~i~H~~~~-~~~~~i~~~~~~ 306 (427)
..+..-++.. ..+...+.++.+.+.|.+ ..+.|..+. +-++.+..+++.
T Consensus 156 T~p~~f~~I~~~~-~~~~rl~~i~~a~~~G~~v~sg~i~GlgEt~ed~v~~~~~l~~l 212 (345)
T PRK15108 156 TSPEFYGNIITTR-TYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANL 212 (345)
T ss_pred cChHhcCCCCCCC-CHHHHHHHHHHHHHcCCceeeEEEEeCCCCHHHHHHHHHHHHhc
Confidence 2222222211 234455666666666654 334444443 445666666665
No 176
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=75.90 E-value=49 Score=30.98 Aligned_cols=112 Identities=6% Similarity=-0.046 Sum_probs=60.9
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC-ChhhHHHHHHHHHHcCCCCcccccccCCHHHHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE-NGDAVFEGQKRMIELGITGPEGHALSRPPLLEG 269 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e-~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~ 269 (427)
+.|++++-+.-+......++.++-.++++.+.+. +++|.+|+. +.....+..+++++.|....-..+.......+.
T Consensus 32 ~~Gv~gi~v~GstGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi~gv~~~t~~~i~~a~~a~~~Gad~v~~~pP~y~~~~~~ 111 (289)
T cd00951 32 SYGAAALFAAGGTGEFFSLTPDEYAQVVRAAVEETAGRVPVLAGAGYGTATAIAYAQAAEKAGADGILLLPPYLTEAPQE 111 (289)
T ss_pred HcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCCEEEecCCCHHHHHHHHHHHHHhCCCEEEECCCCCCCCCHH
Confidence 6888888665444445667888888877766553 478888863 333333344667788876543222211111122
Q ss_pred HHHHHHHHHHHhcCCCEEEEcCCC-HHHHHHHHHHhh
Q 014320 270 EATTRAIRLAEFVNTPLYVVHVMS-MDAMEEIAKARK 305 (427)
Q Consensus 270 ~a~~~~~~~~~~~g~~~~i~H~~~-~~~~~~i~~~~~ 305 (427)
.-+.-...++...+.++.+-+.+. .-+.+.+.++.+
T Consensus 112 ~i~~~f~~v~~~~~~pi~lYn~~g~~l~~~~l~~L~~ 148 (289)
T cd00951 112 GLYAHVEAVCKSTDLGVIVYNRANAVLTADSLARLAE 148 (289)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHh
Confidence 222223334445677877776432 112355665544
No 177
>PRK06361 hypothetical protein; Provisional
Probab=75.08 E-value=34 Score=30.27 Aligned_cols=54 Identities=9% Similarity=0.063 Sum_probs=35.3
Q ss_pred HHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 352 LQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 352 l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+..+.+.|+.++++||. |...+- . .+..+. ....+.+++.++++.+.+.||+++
T Consensus 154 l~~a~~~gi~vv~~SDa--H~~~d~-----------------~-~~~~~~-~i~~~~gl~~~~v~~~~~~~~~~~ 207 (212)
T PRK06361 154 ARIAREAGAPLVINTDT--HAPSDL-----------------I-TYEFAR-KVALGAGLTEKELEEALENNPKLL 207 (212)
T ss_pred HHHHHHhCCcEEEECCC--CCHHHH-----------------H-HHHHHH-HHHcCCCCCHHHHHHHHHHhHHHH
Confidence 33444569999999993 332211 0 112222 334678899999999999999874
No 178
>PRK07945 hypothetical protein; Provisional
Probab=75.07 E-value=81 Score=30.30 Aligned_cols=34 Identities=26% Similarity=0.168 Sum_probs=24.3
Q ss_pred cccccccccccCcCCCCChhhHHHHHHHHHcCCceEEe
Q 014320 106 GGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (427)
Q Consensus 106 G~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~ 143 (427)
=.+|.|+|...+ .|..+.++ ..+.|...|.+.+.
T Consensus 96 ~~~D~H~HT~~S-dg~~~~ee---~v~~Ai~~Gl~~i~ 129 (335)
T PRK07945 96 LRGDLHTHSDWS-DGGSPIEE---MARTAAALGHEYCA 129 (335)
T ss_pred HhhhcccccCCC-CCCCCHHH---HHHHHHHCCCCEEE
Confidence 357999998765 24344444 47889999999876
No 179
>PRK15446 phosphonate metabolism protein PhnM; Provisional
Probab=75.06 E-value=12 Score=36.64 Aligned_cols=44 Identities=14% Similarity=0.024 Sum_probs=34.2
Q ss_pred ccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcCCCCcc
Q 014320 210 FMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPE 257 (427)
Q Consensus 210 ~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~ 257 (427)
..++.+.++.+++.|+++|+++.+|+ +..+.+ +++.+.|+...+
T Consensus 209 ~~~~~e~i~~~v~~A~~~g~~v~sH~~~~~~~i----~~a~~~Gv~~~e 253 (383)
T PRK15446 209 ARYAPPNRRAIAALARARGIPLASHDDDTPEHV----AEAHALGVAIAE 253 (383)
T ss_pred hhcCHHHHHHHHHHHHHCCCceeecCCCCHHHH----HHHHHcCCceee
Confidence 34688999999999999999999999 666544 455666776544
No 180
>cd00947 TBP_aldolase_IIB Tagatose-1,6-bisphosphate (TBP) aldolase and related Type B Class II aldolases. TBP aldolase is a tetrameric class II aldolase that catalyzes the reversible condensation of dihydroxyacetone phosphate with glyceraldehyde 3-phsophate to produce tagatose 1,6-bisphosphate. There is an absolute requirement for a divalent metal ion, usually zinc, and in addition the enzymes are activated by monovalent cations such as Na+. The type A and type B Class II FBPA's differ in the presence and absence of distinct indels in the sequence that result in differing loop lengths in the structures.
Probab=74.14 E-value=76 Score=29.55 Aligned_cols=49 Identities=20% Similarity=0.308 Sum_probs=33.1
Q ss_pred HHHHHHHHHHcCCCeEEEEEec-CC-----CccCCHHHHHHHHHHHHHcCCcEEEecC
Q 014320 185 SDEMEVMVKEKGINSFKFFMAY-KG-----SFMINDELLIEGFKRCKSLGALAMVHAE 236 (427)
Q Consensus 185 ~~~~~~l~~~~g~~~ik~~~~~-~~-----~~~~~~~~l~~~~~~a~~~g~~v~~H~e 236 (427)
.++..+++++-|++.+-+.++. || .+.++.+.|+++-+.. ++|+..|--
T Consensus 150 pe~a~~Fv~~TgvD~LAvsiGt~HG~Y~~~~p~L~~~~L~~i~~~~---~vPLVlHGg 204 (276)
T cd00947 150 PEEAEEFVEETGVDALAVAIGTSHGAYKGGEPKLDFDRLKEIAERV---NVPLVLHGG 204 (276)
T ss_pred HHHHHHHHHHHCCCEEEeccCccccccCCCCCccCHHHHHHHHHHh---CCCEEEeCC
Confidence 4566777766789887765542 22 4556777777766554 899999953
No 181
>PLN02417 dihydrodipicolinate synthase
Probab=72.83 E-value=24 Score=32.85 Aligned_cols=43 Identities=7% Similarity=-0.090 Sum_probs=30.4
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE 236 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e 236 (427)
+.|++++-+.-+....+.++.++-+++++.+.+. .+++.+++.
T Consensus 33 ~~Gv~Gi~~~GstGE~~~ls~~Er~~~~~~~~~~~~~~~pvi~gv~ 78 (280)
T PLN02417 33 ENGAEGLIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGKIKVIGNTG 78 (280)
T ss_pred HcCCCEEEECccCcchhhCCHHHHHHHHHHHHHHhCCCCcEEEECC
Confidence 6899988665444445667888888888776553 478888864
No 182
>PRK09195 gatY tagatose-bisphosphate aldolase; Reviewed
Probab=72.76 E-value=83 Score=29.41 Aligned_cols=49 Identities=14% Similarity=0.173 Sum_probs=33.7
Q ss_pred HHHHHHHHHHcCCCeEEEEEec-CC----CccCCHHHHHHHHHHHHHcCCcEEEecC
Q 014320 185 SDEMEVMVKEKGINSFKFFMAY-KG----SFMINDELLIEGFKRCKSLGALAMVHAE 236 (427)
Q Consensus 185 ~~~~~~l~~~~g~~~ik~~~~~-~~----~~~~~~~~l~~~~~~a~~~g~~v~~H~e 236 (427)
.++..+++++.|++.+-+.++. || .+.++.+.|+++-+ ..++|+..|-.
T Consensus 157 peea~~Fv~~TgvD~LAvaiGt~HG~y~~~p~Ld~~~L~~I~~---~~~vPLVLHGg 210 (284)
T PRK09195 157 PAQAREFVEATGIDSLAVAIGTAHGMYKGEPKLDFDRLENIRQ---WVNIPLVLHGA 210 (284)
T ss_pred HHHHHHHHHHHCcCEEeeccCccccccCCCCcCCHHHHHHHHH---HhCCCeEEecC
Confidence 4566777767799987766543 33 35677777777755 34899999953
No 183
>TIGR03551 F420_cofH 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit. This enzyme, together with CofG, complete the biosynthesis of 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, the chromophore of coenzyme F420. The chromophore is also used in cyanobacteria DNA photolyases.
Probab=72.37 E-value=41 Score=32.41 Aligned_cols=124 Identities=15% Similarity=0.093 Sum_probs=68.4
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChh-----------hHHHHHHHHH
Q 014320 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGD-----------AVFEGQKRMI 249 (427)
Q Consensus 181 ~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~-----------~~~~~~~~l~ 249 (427)
.++..+.+++.. ..|+..+.+.. .. .+....+.+.++++..++....+.+|+.+.. ...+..+++.
T Consensus 72 ~eeI~e~~~~~~-~~G~~~i~l~g-G~-~p~~~~~~~~~i~~~Ik~~~~~i~~~~~t~~ei~~~~~~~g~~~~e~l~~Lk 148 (343)
T TIGR03551 72 LEEIAERAAEAW-KAGATEVCIQG-GI-HPDLDGDFYLDILRAVKEEVPGMHIHAFSPMEVYYGARNSGLSVEEALKRLK 148 (343)
T ss_pred HHHHHHHHHHHH-HCCCCEEEEEe-CC-CCCCCHHHHHHHHHHHHHHCCCceEEecCHHHHHHHHHHcCCCHHHHHHHHH
Confidence 344555555555 57887776542 21 2345778888999999888666777764322 2245557788
Q ss_pred HcCCCCcc-----ccc-----ccCCHHHHHHHHHHHHHHHHhcCCC----EEEEcCCCH-HHHHHHHHHhhcC
Q 014320 250 ELGITGPE-----GHA-----LSRPPLLEGEATTRAIRLAEFVNTP----LYVVHVMSM-DAMEEIAKARKAG 307 (427)
Q Consensus 250 ~~G~~~~~-----~~~-----~~~p~~~e~~a~~~~~~~~~~~g~~----~~i~H~~~~-~~~~~i~~~~~~G 307 (427)
+.|+.... ... ...|.....+...+.++.+++.|.+ ..+.|..+. +-++.+..+++.+
T Consensus 149 eAGl~~i~~~~~E~~~~~v~~~i~~~~~~~~~~~~~i~~a~~~Gi~v~s~~i~G~~Et~ed~~~~l~~lr~l~ 221 (343)
T TIGR03551 149 EAGLDSMPGTAAEILDDEVRKVICPDKLSTAEWIEIIKTAHKLGIPTTATIMYGHVETPEHWVDHLLILREIQ 221 (343)
T ss_pred HhCcccccCcchhhcCHHHHHhcCCCCCCHHHHHHHHHHHHHcCCcccceEEEecCCCHHHHHHHHHHHHHhh
Confidence 88986432 111 1122111122335666777777654 445555443 3344555555443
No 184
>TIGR03849 arch_ComA phosphosulfolactate synthase. This model finds the ComA (Coenzyme M biosynthesis A) protein, phosphosulfolactate synthase, in methanogenic archaea. The ComABC pathway is one of at least two pathways to the intermediate sulfopyruvate. Coenzyme M occurs rarely and sporadically outside of the archaea, as for expoxide metabolism in Xanthobacter autotrophicus Py2, but candidate phosphosulfolactate synthases from that and other species occur fall below the cutoff and outside the scope of this model. This model deliberately is narrower in scope than pfam02679.
Probab=72.22 E-value=16 Score=32.96 Aligned_cols=96 Identities=14% Similarity=0.067 Sum_probs=55.4
Q ss_pred cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHH
Q 014320 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTR 274 (427)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~ 274 (427)
.-++.+|+..+. ....+.+.+++.++.|+++|+++..= + ...+.+. . ...+.+
T Consensus 23 ~yID~lKfg~Gt--~~l~~~~~l~eki~la~~~~V~v~~G--G-tl~E~~~----~------------------q~~~~~ 75 (237)
T TIGR03849 23 DYITFVKFGWGT--SALIDRDIVKEKIEMYKDYGIKVYPG--G-TLFEIAH----S------------------KGKFDE 75 (237)
T ss_pred hheeeEEecCce--EeeccHHHHHHHHHHHHHcCCeEeCC--c-cHHHHHH----H------------------hhhHHH
Confidence 446778874332 23346678999999999999887653 1 1111110 0 123445
Q ss_pred HHHHHHhcCCC-EEEEcC----CCHHHHHHHHHHhhcCCCEEEecCcc
Q 014320 275 AIRLAEFVNTP-LYVVHV----MSMDAMEEIAKARKAGQRVIGEPVVS 317 (427)
Q Consensus 275 ~~~~~~~~g~~-~~i~H~----~~~~~~~~i~~~~~~G~~v~~~~~p~ 317 (427)
.++.++..|.. +-++-. +..+-.+.|+.+++.|..|..|+...
T Consensus 76 Yl~~~k~lGf~~IEiS~G~~~i~~~~~~rlI~~~~~~g~~v~~EvG~K 123 (237)
T TIGR03849 76 YLNECDELGFEAVEISDGSMEISLEERCNLIERAKDNGFMVLSEVGKK 123 (237)
T ss_pred HHHHHHHcCCCEEEEcCCccCCCHHHHHHHHHHHHhCCCeEecccccc
Confidence 55566666653 222222 22344577888888888888776653
No 185
>PRK13352 thiamine biosynthesis protein ThiC; Provisional
Probab=72.00 E-value=1e+02 Score=30.20 Aligned_cols=52 Identities=21% Similarity=0.189 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHhcCCCEEEEcCC--------CH--------HHHHHHHHHhhcCCCEEEecCccceeeC
Q 014320 270 EATTRAIRLAEFVNTPLYVVHVM--------SM--------DAMEEIAKARKAGQRVIGEPVVSGLVLD 322 (427)
Q Consensus 270 ~a~~~~~~~~~~~g~~~~i~H~~--------~~--------~~~~~i~~~~~~G~~v~~~~~p~~l~~~ 322 (427)
+...+.+++++++++-+.+.-.- +. .--++.++++++|+.|..|- |-|.-++
T Consensus 206 e~fD~lLeI~~~yDVtlSLGDglRPG~i~Da~D~aQi~El~~lgeL~~RA~e~gVQvMVEG-PGHvPl~ 273 (431)
T PRK13352 206 EHFDYLLEILKEYDVTLSLGDGLRPGCIADATDRAQIQELITLGELVKRAREAGVQVMVEG-PGHVPLD 273 (431)
T ss_pred HHHHHHHHHHHHhCeeeeccCCcCCCccccCCcHHHHHHHHHHHHHHHHHHHcCCeEEEEC-CCCCCHH
Confidence 45567777787777544333221 10 11356777888888888765 6665444
No 186
>PRK12737 gatY tagatose-bisphosphate aldolase; Reviewed
Probab=71.96 E-value=87 Score=29.28 Aligned_cols=49 Identities=20% Similarity=0.253 Sum_probs=33.4
Q ss_pred HHHHHHHHHHcCCCeEEEEEec-CC----CccCCHHHHHHHHHHHHHcCCcEEEecC
Q 014320 185 SDEMEVMVKEKGINSFKFFMAY-KG----SFMINDELLIEGFKRCKSLGALAMVHAE 236 (427)
Q Consensus 185 ~~~~~~l~~~~g~~~ik~~~~~-~~----~~~~~~~~l~~~~~~a~~~g~~v~~H~e 236 (427)
.++..+++++.|++.+-+.++. || .+.++.+.|+++-+ ..++|+..|-.
T Consensus 157 peeA~~Fv~~TgvD~LAvaiGt~HG~y~~~p~Ld~~~L~~I~~---~~~iPLVlHGg 210 (284)
T PRK12737 157 PDAAAEFVERTGIDSLAVAIGTAHGLYKGEPKLDFERLAEIRE---KVSIPLVLHGA 210 (284)
T ss_pred HHHHHHHHHHhCCCEEeeccCccccccCCCCcCCHHHHHHHHH---HhCCCEEEeCC
Confidence 4566777767899988766543 33 34567777777754 34899999953
No 187
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=71.63 E-value=68 Score=29.92 Aligned_cols=110 Identities=15% Similarity=0.086 Sum_probs=62.3
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc--cCCHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~--~~p~~ 266 (427)
+.|++++-+.-+......++.++-+++++.+.+. .+++.+|+. +.++.....+++++.|....-..+. ..|+.
T Consensus 30 ~~Gv~Gi~~~GstGE~~~Ls~~Er~~~~~~~~~~~~~~~~vi~gv~~~s~~~~i~~a~~a~~~Gad~v~v~pP~y~~~~~ 109 (285)
T TIGR00674 30 ENGTDAIVVVGTTGESPTLSHEEHKKVIEFVVDLVNGRVPVIAGTGSNATEEAISLTKFAEDVGADGFLVVTPYYNKPTQ 109 (285)
T ss_pred HcCCCEEEECccCcccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCccHHHHHHHHHHHHHcCCCEEEEcCCcCCCCCH
Confidence 6788887654333444667888888888776553 478888863 3334444446677888765433222 12222
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEcCCCHH----HHHHHHHHhh
Q 014320 267 LEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (427)
Q Consensus 267 ~e~~a~~~~~~~~~~~g~~~~i~H~~~~~----~~~~i~~~~~ 305 (427)
..-+.-...++...+.++.+-+..... +.+.++++.+
T Consensus 110 --~~i~~~~~~i~~~~~~pi~lYn~P~~tg~~l~~~~l~~L~~ 150 (285)
T TIGR00674 110 --EGLYQHFKAIAEEVDLPIILYNVPSRTGVSLYPETVKRLAE 150 (285)
T ss_pred --HHHHHHHHHHHhcCCCCEEEEECcHHhcCCCCHHHHHHHHc
Confidence 222233333444567788777765321 2455665543
No 188
>PTZ00372 endonuclease 4-like protein; Provisional
Probab=71.33 E-value=1.1e+02 Score=30.26 Aligned_cols=79 Identities=18% Similarity=0.189 Sum_probs=52.1
Q ss_pred HHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecCC---CccCCHHHHHHHHHHHHHcCCc
Q 014320 154 TAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKG---SFMINDELLIEGFKRCKSLGAL 230 (427)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~---~~~~~~~~l~~~~~~a~~~g~~ 230 (427)
...+....+......+.+|.|.+.... ....+.+.. ..|+..+.+|..... ....+++...++.+.++++|+.
T Consensus 116 ~~~~~~~~~~~~~~~~~iGaHvSiaGG---~~~a~~~a~-~~g~~afqiF~~npr~w~~~~~~~~~~~~f~~~~~~~gi~ 191 (413)
T PTZ00372 116 DNAFNKIAELAEKSNVYIGAHVSASGG---VDNSPINAY-NIAGQAFALFLKNQRTWNSPPLSDETIDKFKENCKKYNYD 191 (413)
T ss_pred HHHHHHHHHHhhccCceEEEEEecccc---HHHHHHHHH-HcCCCEEEEEcCCCccCCCCCCCHHHHHHHHHHHHHcCCC
Confidence 334444444445566677777665432 223445555 789999999986432 2346788999999999999764
Q ss_pred ---EEEecC
Q 014320 231 ---AMVHAE 236 (427)
Q Consensus 231 ---v~~H~e 236 (427)
+.+|+.
T Consensus 192 ~~~i~~Hap 200 (413)
T PTZ00372 192 PKFILPHGS 200 (413)
T ss_pred cceEEeecC
Confidence 788964
No 189
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=70.39 E-value=27 Score=32.68 Aligned_cols=43 Identities=12% Similarity=0.069 Sum_probs=28.7
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHH---cCCcEEEecC
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAE 236 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~e 236 (427)
..|++++-+.-.......++.++..++++.+.+ .++++.+++.
T Consensus 33 ~~Gv~gl~~~GstGE~~~Lt~~Er~~l~~~~~~~~~~~~~vi~gv~ 78 (289)
T PF00701_consen 33 EAGVDGLVVLGSTGEFYSLTDEERKELLEIVVEAAAGRVPVIAGVG 78 (289)
T ss_dssp HTTSSEEEESSTTTTGGGS-HHHHHHHHHHHHHHHTTSSEEEEEEE
T ss_pred HcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHccCceEEEecCc
Confidence 689988755444344566788888887777655 3578888863
No 190
>PRK08610 fructose-bisphosphate aldolase; Reviewed
Probab=69.87 E-value=97 Score=28.99 Aligned_cols=49 Identities=18% Similarity=0.179 Sum_probs=33.3
Q ss_pred HHHHHHHHHHcCCCeEEEEEec-CC----CccCCHHHHHHHHHHHHHcCCcEEEecC
Q 014320 185 SDEMEVMVKEKGINSFKFFMAY-KG----SFMINDELLIEGFKRCKSLGALAMVHAE 236 (427)
Q Consensus 185 ~~~~~~l~~~~g~~~ik~~~~~-~~----~~~~~~~~l~~~~~~a~~~g~~v~~H~e 236 (427)
.++..+.+++-|++.+-+.++. || .+.++.+.|+++.+ +.++|+..|-.
T Consensus 158 peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~---~~~vPLVLHGg 211 (286)
T PRK08610 158 PKECQELVEKTGIDALAPALGSVHGPYKGEPKLGFKEMEEIGL---STGLPLVLHGG 211 (286)
T ss_pred HHHHHHHHHHHCCCEEEeeccccccccCCCCCCCHHHHHHHHH---HHCCCEEEeCC
Confidence 4566777767899988766542 33 34566777777644 45899999953
No 191
>TIGR01858 tag_bisphos_ald class II aldolase, tagatose bisphosphate family. This model describes tagatose-1,6-bisphosphate aldolases, and perhaps other closely related class II aldolases. This tetrameric, Zn2+-dependent enzyme is related to the class II fructose bisphosphate aldolase; fructose 1,6-bisphosphate and tagatose 1,6 bisphosphate differ only in chirality at C4.
Probab=69.50 E-value=99 Score=28.90 Aligned_cols=50 Identities=16% Similarity=0.252 Sum_probs=34.1
Q ss_pred HHHHHHHHHHcCCCeEEEEEec-CC----CccCCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 185 SDEMEVMVKEKGINSFKFFMAY-KG----SFMINDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 185 ~~~~~~l~~~~g~~~ik~~~~~-~~----~~~~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
.++..+.+++-|++.+-+.++. || .+.++.+.|+++-+ +.++|+..|-.+
T Consensus 155 peea~~Fv~~TgvD~LAvaiGt~HG~yk~~p~Ldf~~L~~I~~---~~~iPLVlHGgS 209 (282)
T TIGR01858 155 PQEAKEFVEATGVDSLAVAIGTAHGLYKKTPKLDFDRLAEIRE---VVDVPLVLHGAS 209 (282)
T ss_pred HHHHHHHHHHHCcCEEecccCccccCcCCCCccCHHHHHHHHH---HhCCCeEEecCC
Confidence 3566777767899988766543 33 34567777777754 458999999533
No 192
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=68.81 E-value=86 Score=29.36 Aligned_cols=110 Identities=15% Similarity=0.077 Sum_probs=60.9
Q ss_pred HcC-CCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc--cCCH
Q 014320 194 EKG-INSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPP 265 (427)
Q Consensus 194 ~~g-~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~--~~p~ 265 (427)
..| ++++-+.-+......++.++-+++++.+.+. .++|.+++. +.+...+..+++++.|..+.-..+. ..|+
T Consensus 32 ~~G~v~gi~~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~gv~~~~t~~~i~la~~a~~~Gad~v~v~~P~y~~~~ 111 (290)
T TIGR00683 32 DKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYYKFS 111 (290)
T ss_pred hCCCcCEEEECCcccccccCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHHhCCCEEEEeCCcCCCCC
Confidence 577 8887554443444567888888877766543 478888863 3344444456677888755433222 1222
Q ss_pred HHHHHHHHHHHHHHHhc-CCCEEEEcCCCHH----HHHHHHHHhh
Q 014320 266 LLEGEATTRAIRLAEFV-NTPLYVVHVMSMD----AMEEIAKARK 305 (427)
Q Consensus 266 ~~e~~a~~~~~~~~~~~-g~~~~i~H~~~~~----~~~~i~~~~~ 305 (427)
.. ..+.-..+++... +.++.+-|.+... +.+.+.++.+
T Consensus 112 ~~--~i~~yf~~v~~~~~~lpv~lYn~P~~tg~~l~~~~i~~L~~ 154 (290)
T TIGR00683 112 FP--EIKHYYDTIIAETGGLNMIVYSIPFLTGVNMGIEQFGELYK 154 (290)
T ss_pred HH--HHHHHHHHHHhhCCCCCEEEEeCccccccCcCHHHHHHHhc
Confidence 22 2222233333444 5788777765321 2355666544
No 193
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=68.49 E-value=1.1e+02 Score=28.84 Aligned_cols=109 Identities=15% Similarity=0.046 Sum_probs=60.8
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHH---cCCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc--cCCHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~--~~p~~ 266 (427)
..|++++-+.-+......++.++-.++++.+.+ ..++|.+|+. +.++..+..+++++.|....-..+. ..|+.
T Consensus 32 ~~Gv~gi~v~GstGE~~~Ls~~Er~~l~~~~~~~~~g~~pvi~gv~~~~t~~ai~~a~~A~~~Gad~v~v~pP~y~~~~~ 111 (294)
T TIGR02313 32 EGGSHAISVGGTSGEPGSLTLEERKQAIENAIDQIAGRIPFAPGTGALNHDETLELTKFAEEAGADAAMVIVPYYNKPNQ 111 (294)
T ss_pred HcCCCEEEECccCcccccCCHHHHHHHHHHHHHHhCCCCcEEEECCcchHHHHHHHHHHHHHcCCCEEEEcCccCCCCCH
Confidence 578887755444444556788877777765543 3478888863 3333444446677888754433222 12332
Q ss_pred HHHHHHHHHHHHHHhc-CCCEEEEcCCCHH----HHHHHHHHh
Q 014320 267 LEGEATTRAIRLAEFV-NTPLYVVHVMSMD----AMEEIAKAR 304 (427)
Q Consensus 267 ~e~~a~~~~~~~~~~~-g~~~~i~H~~~~~----~~~~i~~~~ 304 (427)
. .-+.-...++... +.++.+-+..... +.+.+.++.
T Consensus 112 ~--~l~~~f~~ia~a~~~lpv~iYn~P~~tg~~l~~~~l~~L~ 152 (294)
T TIGR02313 112 E--ALYDHFAEVADAVPDFPIIIYNIPGRAAQEIAPKTMARLR 152 (294)
T ss_pred H--HHHHHHHHHHHhccCCCEEEEeCchhcCcCCCHHHHHHHH
Confidence 2 2233333445556 6888887765321 245666664
No 194
>TIGR01108 oadA oxaloacetate decarboxylase alpha subunit. This model describes the bacterial oxaloacetate decarboxylase alpha subunit and its equivalents in archaea. The oxaloacetate decarboxylase Na+ pump is the paradigm of the family of Na+ transport decarboxylases that present in bacteria and archaea. It a multi subunit enzyme consisting of a peripheral alpha-subunit and integral membrane subunits beta and gamma. The energy released by the decarboxylation reaction of oxaloacetate is coupled to Na+ ion pumping across the membrane.
Probab=67.86 E-value=1.2e+02 Score=31.75 Aligned_cols=179 Identities=15% Similarity=0.052 Sum_probs=0.0
Q ss_pred ChhhHHHHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHcCCCeEE
Q 014320 123 TIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFK 201 (427)
Q Consensus 123 ~~e~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik 201 (427)
..+-.....+.++.+|+..++-+....+. .....++..++.+......+.+........+...+..+++. +.|++.|-
T Consensus 89 pddvv~~~v~~a~~~Gvd~irif~~lnd~~n~~~~i~~ak~~G~~v~~~i~~t~~p~~~~~~~~~~~~~~~-~~Gad~I~ 167 (582)
T TIGR01108 89 ADDVVERFVKKAVENGMDVFRIFDALNDPRNLQAAIQAAKKHGAHAQGTISYTTSPVHTLETYLDLAEELL-EMGVDSIC 167 (582)
T ss_pred chhhHHHHHHHHHHCCCCEEEEEEecCcHHHHHHHHHHHHHcCCEEEEEEEeccCCCCCHHHHHHHHHHHH-HcCCCEEE
Q ss_pred EEEecCCCccCCHHHHHHHHHHHHHc-CCcEEEecCChhhHHHHH-HHHHHcCCCCcccccccCCHHHHHHHHHHHHHHH
Q 014320 202 FFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHAENGDAVFEGQ-KRMIELGITGPEGHALSRPPLLEGEATTRAIRLA 279 (427)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~e~~~~~~~~~-~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~ 279 (427)
+ .......++....++++..++. ++++++|+.++....... -...+.|......-..+.-..+-..+++..+...
T Consensus 168 i---~Dt~G~~~P~~v~~lv~~lk~~~~~pi~~H~Hnt~Gla~An~laAveaGa~~vd~ai~GlG~~tGn~~le~vv~~L 244 (582)
T TIGR01108 168 I---KDMAGILTPKAAYELVSALKKRFGLPVHLHSHATTGMAEMALLKAIEAGADGIDTAISSMSGGTSHPPTETMVAAL 244 (582)
T ss_pred E---CCCCCCcCHHHHHHHHHHHHHhCCCceEEEecCCCCcHHHHHHHHHHhCCCEEEeccccccccccChhHHHHHHHH
Q ss_pred HhcCCCEEEEcCCCHHHHHHHHHHhh
Q 014320 280 EFVNTPLYVVHVMSMDAMEEIAKARK 305 (427)
Q Consensus 280 ~~~g~~~~i~H~~~~~~~~~i~~~~~ 305 (427)
...|....+..-...+..+.++..++
T Consensus 245 ~~~g~~tgid~~~L~~l~~~~~~v~~ 270 (582)
T TIGR01108 245 RGTGYDTGLDIELLLEIAAYFREVRK 270 (582)
T ss_pred HhcCCCcccCHHHHHHHHHHHHHHHH
No 195
>COG2108 Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme [General function prediction only]
Probab=66.74 E-value=1.2e+02 Score=28.87 Aligned_cols=35 Identities=17% Similarity=0.137 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHh-cCCCEEEEcCCCHHHHHHHHHHh
Q 014320 270 EATTRAIRLAEF-VNTPLYVVHVMSMDAMEEIAKAR 304 (427)
Q Consensus 270 ~a~~~~~~~~~~-~g~~~~i~H~~~~~~~~~i~~~~ 304 (427)
++..+.++.+.. .+..+|.|.....++++.=.+++
T Consensus 231 E~~Lk~l~~~~~~~~l~vH~Css~~KDavQ~r~Rl~ 266 (353)
T COG2108 231 EAALKVLKWAEENWDLTVHYCSSKFKDAVQLRNRLK 266 (353)
T ss_pred HHHHHHHHHHhcccCceEEECchhhhHHHHHHHHHH
Confidence 445555555544 46667787777767665544443
No 196
>KOG3020 consensus TatD-related DNase [Replication, recombination and repair]
Probab=66.45 E-value=90 Score=29.28 Aligned_cols=136 Identities=15% Similarity=0.163 Sum_probs=71.4
Q ss_pred eCCCCEEeccccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceecc
Q 014320 97 DATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMA 176 (427)
Q Consensus 97 D~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (427)
|-.....-|.+.|.|.|+.... ..... ..-...+...||.-++.++.... .....++.....-...+-.+|.|.-
T Consensus 8 d~~~~~~~~~~~~~~~~~~~~~--~~~d~--s~v~~~a~~~~v~~~~v~gt~~~-d~~~~~~l~~~y~~~v~~t~G~HP~ 82 (296)
T KOG3020|consen 8 DDGRNFTNPMLEDIYCHIQAHP--SDSDA--SQVLERAVQAGVSKLIVTGTSLK-DSKEALELAEKYPGSVYPTFGVHPH 82 (296)
T ss_pred hhhhhhcchhhchhhhccccCC--CCccc--hHHHHHHHhccceEEEEeCCCcc-hHHHHHHHHhhCCCceeeccCcCCC
Confidence 4444566789999999987652 11111 11245677889999887765221 2333332222221223333443321
Q ss_pred cc-CC-----ChhhHHHHHHHHHH---cCCCeEEEE-EecCCCccCC----HHHHHHHHHHHHHcCCcEEEecCC
Q 014320 177 IT-KW-----DEVVSDEMEVMVKE---KGINSFKFF-MAYKGSFMIN----DELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 177 ~~-~~-----~~~~~~~~~~l~~~---~g~~~ik~~-~~~~~~~~~~----~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
.. .+ .+...+++..+.+. ..+..|..+ +++......+ ...+++-+++|.+..+|+.+|+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~L~~~~~~~~~~k~vAiGEcGLD~~r~~~~~~~~Qk~vFekQl~LA~~~~~Pl~iH~r~ 157 (296)
T KOG3020|consen 83 FSQEFSDQSRKEKFLDTLLSIIENGFLPKVVAIGECGLDYDRLQFSDKEEQKTVFEKQLDLAKRLKLPLFIHCRS 157 (296)
T ss_pred cccchhhccchhhHHHHHHHHHhhcccCCeEEeeccccccchhccCChHHHHHHHHHHHHHHHHccCCeeeechh
Confidence 11 11 12345666666644 122233322 2222221222 346788999999999999999744
No 197
>PRK08444 hypothetical protein; Provisional
Probab=66.13 E-value=1.3e+02 Score=29.10 Aligned_cols=123 Identities=17% Similarity=0.129 Sum_probs=71.7
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhH-----------HHHHHHHHH
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAV-----------FEGQKRMIE 250 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~-----------~~~~~~l~~ 250 (427)
++..+.+++.. ..|+..+-+..+.+ +..+.+.+.++++..++.--.+++|+-+..++ ++...+|.+
T Consensus 83 eeI~~~a~~a~-~~G~~ei~iv~G~~--p~~~~e~y~e~ir~Ik~~~p~i~i~a~s~~Ei~~~a~~~g~~~~e~l~~Lke 159 (353)
T PRK08444 83 EEILEIVKNSV-KRGIKEVHIVSAHN--PNYGYEWYLEIFKKIKEAYPNLHVKAMTAAEVDFLSRKFGKSYEEVLEDMLE 159 (353)
T ss_pred HHHHHHHHHHH-HCCCCEEEEeccCC--CCCCHHHHHHHHHHHHHHCCCceEeeCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 44555555555 68888876654322 33467788888888887533588887544443 444567888
Q ss_pred cCCCCcccc----------cccCCHHHHHHHHHHHHHHHHhcCCC----EEEEcCCCH-HHHHHHHHHhhcC
Q 014320 251 LGITGPEGH----------ALSRPPLLEGEATTRAIRLAEFVNTP----LYVVHVMSM-DAMEEIAKARKAG 307 (427)
Q Consensus 251 ~G~~~~~~~----------~~~~p~~~e~~a~~~~~~~~~~~g~~----~~i~H~~~~-~~~~~i~~~~~~G 307 (427)
.|+....+. ....|.....+...+..+.+.+.|.+ ..+.|..+. +-++.+..+|+.+
T Consensus 160 AGl~~~~g~~aEi~~~~vr~~I~p~k~~~~~~~~i~~~a~~~Gi~~~sg~l~G~gEt~edrv~hl~~Lr~Lq 231 (353)
T PRK08444 160 YGVDSMPGGGAEIFDEEVRKKICKGKVSSERWLEIHKYWHKKGKMSNATMLFGHIENREHRIDHMLRLRDLQ 231 (353)
T ss_pred hCcccCCCCCchhcCHHHHhhhCCCCCCHHHHHHHHHHHHHcCCCccceeEEecCCCHHHHHHHHHHHHHhc
Confidence 998644321 11134333334444555666666644 667787664 3355555555543
No 198
>PF02679 ComA: (2R)-phospho-3-sulfolactate synthase (ComA); InterPro: IPR003830 Methanogenic archaea produce methane via the anaerobic reduction of acetate or single carbon compounds []. Coenzyme M (CoM; 2-mercaptoethanesulphonic acid) serves as the terminal methyl carrier for this process. Previously thought to be unique to methanogenic archaea, CoM has also been found in methylotrophic bacteria. Biosynthesis of CoM begins with the Michael addition of sulphite to phosphoenolpyruvate, forming 2-phospho-3-sulpholactate (PSL). This reaction is catalyzed by members of this family, PSL synthase (ComA) []. Subsequently, PSL is dephosphorylated by phosphosulpholactate phosphatase (ComB) to form 3-sulpholactate [], which is then converted to 3-sulphopyruvate by L-sulpholactate dehydrogenase (ComC; 1.1.1.272 from EC) []. Sulphopyruvate decarboxylase (ComDE; 4.1.1.79 from EC) converts 3-sulphopyruvate to sulphoacetaldehyde []. Reductive thiolation of sulphoacetaldehyde is the final step.; GO: 0019295 coenzyme M biosynthetic process; PDB: 1U83_A 1QWG_A.
Probab=65.42 E-value=99 Score=28.15 Aligned_cols=95 Identities=17% Similarity=0.125 Sum_probs=48.2
Q ss_pred cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHH
Q 014320 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTR 274 (427)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~ 274 (427)
.-++.+|+..+ .....+.+.+++.++.++++|+.+..= ....+ .+... ..+.+
T Consensus 36 ~yID~~K~g~G--t~~l~~~~~l~eki~l~~~~gV~v~~G---Gtl~E----~a~~q------------------~~~~~ 88 (244)
T PF02679_consen 36 DYIDFLKFGWG--TSALYPEEILKEKIDLAHSHGVYVYPG---GTLFE----VAYQQ------------------GKFDE 88 (244)
T ss_dssp GG-SEEEE-TT--GGGGSTCHHHHHHHHHHHCTT-EEEE----HHHHH----HHHHT------------------T-HHH
T ss_pred hhccEEEecCc--eeeecCHHHHHHHHHHHHHcCCeEeCC---cHHHH----HHHhc------------------ChHHH
Confidence 44667776432 233456778888888888888776542 11110 00001 22344
Q ss_pred HHHHHHhcCCC-EEEEcCCC----HHHHHHHHHHhhcCCCEEEecCc
Q 014320 275 AIRLAEFVNTP-LYVVHVMS----MDAMEEIAKARKAGQRVIGEPVV 316 (427)
Q Consensus 275 ~~~~~~~~g~~-~~i~H~~~----~~~~~~i~~~~~~G~~v~~~~~p 316 (427)
.++.++..|.. +-++-.+. .+-.+.|+++++.|..|..|+..
T Consensus 89 yl~~~k~lGf~~IEiSdGti~l~~~~r~~~I~~~~~~Gf~v~~EvG~ 135 (244)
T PF02679_consen 89 YLEECKELGFDAIEISDGTIDLPEEERLRLIRKAKEEGFKVLSEVGK 135 (244)
T ss_dssp HHHHHHHCT-SEEEE--SSS---HHHHHHHHHHHCCTTSEEEEEES-
T ss_pred HHHHHHHcCCCEEEecCCceeCCHHHHHHHHHHHHHCCCEEeecccC
Confidence 45555555543 22333322 23356788888888888877763
No 199
>cd00019 AP2Ec AP endonuclease family 2; These endonucleases play a role in DNA repair. Cleave phosphodiester bonds at apurinic or apyrimidinic sites; the alignment also contains hexulose-6-phosphate isomerases, enzymes that catalyze the epimerization of D-arabino-6-hexulose 3-phosphate to D-fructose 6-phosphate, via cleaving the phosphoesterbond with the sugar.
Probab=65.36 E-value=1.1e+02 Score=28.11 Aligned_cols=43 Identities=21% Similarity=0.138 Sum_probs=25.5
Q ss_pred HHcCCCeEEEEEecCCC---ccCCHHHHHHHHHHHHHc-CCcEEEec
Q 014320 193 KEKGINSFKFFMAYKGS---FMINDELLIEGFKRCKSL-GALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~---~~~~~~~l~~~~~~a~~~-g~~v~~H~ 235 (427)
++.|.+.+.+.+..... ...+++.+.++.+.+.++ ++.+.+|+
T Consensus 20 ~~~G~d~vEl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~ 66 (279)
T cd00019 20 KEIGFDTVAMFLGNPRSWLSRPLKKERAEKFKAIAEEGPSICLSVHA 66 (279)
T ss_pred HHcCCCEEEEEcCCCCccCCCCCCHHHHHHHHHHHHHcCCCcEEEEc
Confidence 36677777665543211 112556777777777777 66777774
No 200
>PRK12999 pyruvate carboxylase; Reviewed
Probab=65.15 E-value=1.1e+02 Score=34.86 Aligned_cols=121 Identities=12% Similarity=0.040 Sum_probs=63.9
Q ss_pred HHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhccccceeceeccccC-----CChhhHHHHHHHHHHcCCCeEEEEE
Q 014320 131 QAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITK-----WDEVVSDEMEVMVKEKGINSFKFFM 204 (427)
Q Consensus 131 ~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~~g~~~ik~~~ 204 (427)
.+.+..+|+..++-+-...+. .....++..++.+....+.+++.+...+ .+.+...++.+.+.+.|++.|.+-
T Consensus 633 i~~a~~~Gid~~rifd~lnd~~~~~~~i~~vk~~g~~~~~~i~ytg~~~d~~~~~~~~~~~~~~a~~l~~~Ga~~i~ik- 711 (1146)
T PRK12999 633 VREAAAAGIDVFRIFDSLNWVENMRVAIDAVRETGKIAEAAICYTGDILDPARAKYDLDYYVDLAKELEKAGAHILAIK- 711 (1146)
T ss_pred HHHHHHcCCCEEEEeccCChHHHHHHHHHHHHHcCCeEEEEEEEEecCCCCCCCCCCHHHHHHHHHHHHHcCCCEEEEC-
Confidence 677889999998855322211 3334444444443322333444321111 233333344333336888866431
Q ss_pred ecCCCccCCHHHHHHHHHHHHH-cCCcEEEecCChhhHHHHH-HHHHHcCCC
Q 014320 205 AYKGSFMINDELLIEGFKRCKS-LGALAMVHAENGDAVFEGQ-KRMIELGIT 254 (427)
Q Consensus 205 ~~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~e~~~~~~~~~-~~l~~~G~~ 254 (427)
+.. ...++....+++...++ .++++++|+.++....... -...+.|..
T Consensus 712 Dt~--G~l~P~~~~~lv~~lk~~~~ipi~~H~Hnt~Gla~an~laA~~aGad 761 (1146)
T PRK12999 712 DMA--GLLKPAAAYELVSALKEEVDLPIHLHTHDTSGNGLATYLAAAEAGVD 761 (1146)
T ss_pred Ccc--CCCCHHHHHHHHHHHHHHcCCeEEEEeCCCCchHHHHHHHHHHhCCC
Confidence 222 23578888888877765 5899999987665432221 233456654
No 201
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=64.96 E-value=1.3e+02 Score=28.45 Aligned_cols=120 Identities=15% Similarity=0.095 Sum_probs=69.8
Q ss_pred hHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEec--CChhhHHHHHHHHHHcCCCCccc
Q 014320 184 VSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHA--ENGDAVFEGQKRMIELGITGPEG 258 (427)
Q Consensus 184 ~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~--e~~~~~~~~~~~l~~~G~~~~~~ 258 (427)
.++++.+..-+.|++++-+.-+....+.++.++-.++++.+.+. .+++.+++ .+.++..+..+++++.|..+.-.
T Consensus 26 a~~~lv~~li~~Gv~gi~~~GttGE~~~Ls~eEr~~v~~~~v~~~~grvpviaG~g~~~t~eai~lak~a~~~Gad~il~ 105 (299)
T COG0329 26 ALRRLVEFLIAAGVDGLVVLGTTGESPTLTLEERKEVLEAVVEAVGGRVPVIAGVGSNSTAEAIELAKHAEKLGADGILV 105 (299)
T ss_pred HHHHHHHHHHHcCCCEEEECCCCccchhcCHHHHHHHHHHHHHHHCCCCcEEEecCCCcHHHHHHHHHHHHhcCCCEEEE
Confidence 33443333326888888665555555678888888888888764 26688886 33344444557788888765543
Q ss_pred ccc--cCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHH----HHHHHHHHhh
Q 014320 259 HAL--SRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (427)
Q Consensus 259 ~~~--~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~----~~~~i~~~~~ 305 (427)
.+. .+|+..+. ......++...+.++.+-...... ..+.+.++.+
T Consensus 106 v~PyY~k~~~~gl--~~hf~~ia~a~~lPvilYN~P~~tg~~l~~e~i~~la~ 156 (299)
T COG0329 106 VPPYYNKPSQEGL--YAHFKAIAEAVDLPVILYNIPSRTGVDLSPETIARLAE 156 (299)
T ss_pred eCCCCcCCChHHH--HHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhc
Confidence 322 34443332 333334444457777777664321 2456666554
No 202
>PRK09282 pyruvate carboxylase subunit B; Validated
Probab=64.76 E-value=1e+02 Score=32.17 Aligned_cols=121 Identities=12% Similarity=0.071 Sum_probs=63.2
Q ss_pred HHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhccccceeceeccccCCChh-hHHHHHHHHHHcCCCeEEEEEec
Q 014320 129 SGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEV-VSDEMEVMVKEKGINSFKFFMAY 206 (427)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~g~~~ik~~~~~ 206 (427)
...+.+..+|+..++-+....+. +....++..++.+......+.+... +..+.+ ..+..+++. +.|++.|-+. +.
T Consensus 100 ~~v~~A~~~Gvd~irif~~lnd~~n~~~~i~~ak~~G~~v~~~i~~t~~-p~~t~~~~~~~a~~l~-~~Gad~I~i~-Dt 176 (592)
T PRK09282 100 KFVEKAAENGIDIFRIFDALNDVRNMEVAIKAAKKAGAHVQGTISYTTS-PVHTIEKYVELAKELE-EMGCDSICIK-DM 176 (592)
T ss_pred HHHHHHHHCCCCEEEEEEecChHHHHHHHHHHHHHcCCEEEEEEEeccC-CCCCHHHHHHHHHHHH-HcCCCEEEEC-Cc
Confidence 44667888999988754322211 3444455444444322222222111 112233 334444554 6888876432 22
Q ss_pred CCCccCCHHHHHHHHHHHHH-cCCcEEEecCChhhHHHH-HHHHHHcCCC
Q 014320 207 KGSFMINDELLIEGFKRCKS-LGALAMVHAENGDAVFEG-QKRMIELGIT 254 (427)
Q Consensus 207 ~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~e~~~~~~~~-~~~l~~~G~~ 254 (427)
.| ...++...++++..++ .++++.+|+.++....-. .-...+.|..
T Consensus 177 ~G--~~~P~~~~~lv~~lk~~~~~pi~~H~Hnt~Gla~An~laAv~aGad 224 (592)
T PRK09282 177 AG--LLTPYAAYELVKALKEEVDLPVQLHSHCTSGLAPMTYLKAVEAGVD 224 (592)
T ss_pred CC--CcCHHHHHHHHHHHHHhCCCeEEEEEcCCCCcHHHHHHHHHHhCCC
Confidence 22 3578888888887765 478899998765433222 1223455654
No 203
>TIGR01235 pyruv_carbox pyruvate carboxylase. This enzyme plays a role in gluconeogensis but not glycolysis.
Probab=64.73 E-value=92 Score=35.35 Aligned_cols=109 Identities=13% Similarity=0.059 Sum_probs=63.0
Q ss_pred HHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhccccceeceecccc-----CCChhhHHHHHHHHHHcCCCeEEE
Q 014320 129 SGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAIT-----KWDEVVSDEMEVMVKEKGINSFKF 202 (427)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~~g~~~ik~ 202 (427)
...+.+.++|+..++-+-.-++. ++...++..++.+......+.+.+... ..+.+...++.+.+.+.|++.|.+
T Consensus 629 ~f~~~~~~~GidifrifD~lN~~~n~~~~~~~~~~~g~~~~~~i~yt~~~~d~~~~~~~l~y~~~~ak~l~~~Gad~I~i 708 (1143)
T TIGR01235 629 YFVKQAAQGGIDIFRVFDSLNWVENMRVGMDAVAEAGKVVEAAICYTGDILDPARPKYDLKYYTNLAVELEKAGAHILGI 708 (1143)
T ss_pred HHHHHHHHcCCCEEEECccCcCHHHHHHHHHHHHHcCCEEEEEEEEeccCCCcCCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 44567789999999865433322 566666777766644333344433221 122333333333333788886633
Q ss_pred EEecCCCccCCHHHHHHHHHHHHH-cCCcEEEecCChhh
Q 014320 203 FMAYKGSFMINDELLIEGFKRCKS-LGALAMVHAENGDA 240 (427)
Q Consensus 203 ~~~~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~e~~~~ 240 (427)
- +.. ...++....++++..++ .++++++|+.+...
T Consensus 709 k-Dt~--Gll~P~~~~~Lv~~lk~~~~~pi~~H~Hdt~G 744 (1143)
T TIGR01235 709 K-DMA--GLLKPAAAKLLIKALREKTDLPIHFHTHDTSG 744 (1143)
T ss_pred C-CCc--CCcCHHHHHHHHHHHHHhcCCeEEEEECCCCC
Confidence 1 222 23577788888777755 48999999876543
No 204
>PRK07998 gatY putative fructose-1,6-bisphosphate aldolase; Reviewed
Probab=64.22 E-value=93 Score=29.09 Aligned_cols=49 Identities=14% Similarity=0.153 Sum_probs=32.6
Q ss_pred HHHHHHHHHHcCCCeEEEEEec-CCC---ccCCHHHHHHHHHHHHHcCCcEEEecC
Q 014320 185 SDEMEVMVKEKGINSFKFFMAY-KGS---FMINDELLIEGFKRCKSLGALAMVHAE 236 (427)
Q Consensus 185 ~~~~~~l~~~~g~~~ik~~~~~-~~~---~~~~~~~l~~~~~~a~~~g~~v~~H~e 236 (427)
.++..+++++-|++.+.+.++. ||. +.++.+.++++.+ ..++|+..|-.
T Consensus 155 pe~a~~Fv~~TgvD~LAvaiGt~HG~Y~~p~l~~~~l~~I~~---~~~vPLVlHGg 207 (283)
T PRK07998 155 PEKVKDFVERTGCDMLAVSIGNVHGLEDIPRIDIPLLKRIAE---VSPVPLVIHGG 207 (283)
T ss_pred HHHHHHHHHHhCcCeeehhccccccCCCCCCcCHHHHHHHHh---hCCCCEEEeCC
Confidence 4556777767899988776642 343 3455666666644 45999999953
No 205
>PRK14040 oxaloacetate decarboxylase; Provisional
Probab=64.17 E-value=1.5e+02 Score=31.05 Aligned_cols=123 Identities=14% Similarity=0.121 Sum_probs=63.6
Q ss_pred HHHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEec
Q 014320 128 FSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAY 206 (427)
Q Consensus 128 ~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~ 206 (427)
....+.+..+|+..++-+-...+. .....++..++.+......+.+.... ..+.+...++.+.+...|++.|-+. +.
T Consensus 100 ~~~v~~a~~~Gid~~rifd~lnd~~~~~~ai~~ak~~G~~~~~~i~yt~~p-~~~~~~~~~~a~~l~~~Gad~i~i~-Dt 177 (593)
T PRK14040 100 ERFVERAVKNGMDVFRVFDAMNDPRNLETALKAVRKVGAHAQGTLSYTTSP-VHTLQTWVDLAKQLEDMGVDSLCIK-DM 177 (593)
T ss_pred HHHHHHHHhcCCCEEEEeeeCCcHHHHHHHHHHHHHcCCeEEEEEEEeeCC-ccCHHHHHHHHHHHHHcCCCEEEEC-CC
Confidence 344677899999988754322211 33344454444443221122222211 1223334444333336788876432 22
Q ss_pred CCCccCCHHHHHHHHHHHHH-cCCcEEEecCChhhHHHHH-HHHHHcCCC
Q 014320 207 KGSFMINDELLIEGFKRCKS-LGALAMVHAENGDAVFEGQ-KRMIELGIT 254 (427)
Q Consensus 207 ~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~e~~~~~~~~~-~~l~~~G~~ 254 (427)
.| ...++...++++..++ .++++.+|+.++....... -...+.|..
T Consensus 178 ~G--~l~P~~~~~lv~~lk~~~~~pi~~H~Hnt~GlA~An~laAieAGa~ 225 (593)
T PRK14040 178 AG--LLKPYAAYELVSRIKKRVDVPLHLHCHATTGLSTATLLKAIEAGID 225 (593)
T ss_pred CC--CcCHHHHHHHHHHHHHhcCCeEEEEECCCCchHHHHHHHHHHcCCC
Confidence 22 3577888888877765 5789999987665432221 223455553
No 206
>cd07937 DRE_TIM_PC_TC_5S Pyruvate carboxylase and Transcarboxylase 5S, carboxyltransferase domain. This family includes the carboxyltransferase domains of pyruvate carboxylase (PC) and the transcarboxylase (TC) 5S subunit. Transcarboxylase 5S is a cobalt-dependent metalloenzyme subunit of the biotin-dependent transcarboxylase multienzyme complex. Transcarboxylase 5S transfers carbon dioxide from the 1.3S biotin to pyruvate in the second of two carboxylation reactions catalyzed by TC. The first reaction involves the transfer of carbon dioxide from methylmalonyl-CoA to the 1.3S biotin, and is catalyzed by the 12S subunit. These two steps allow a carboxylate group to be transferred from oxaloacetate to propionyl-CoA to yield pyruvate and methylmalonyl-CoA. The catalytic domain of transcarboxylase 5S has a canonical TIM-barrel fold with a large C-terminal extension that forms a funnel leading to the active site. Transcarboxylase 5S forms a homodimer and there are six dimers per complex
Probab=63.96 E-value=1.2e+02 Score=28.05 Aligned_cols=107 Identities=13% Similarity=0.039 Sum_probs=55.5
Q ss_pred HHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecCC
Q 014320 130 GQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKG 208 (427)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~ 208 (427)
..+.+...|+..++-+....+. ...+.++..++.+......+..... ...+.+.+.++.+.+.+.|++.|.+. +..
T Consensus 96 di~~~~~~g~~~iri~~~~~~~~~~~~~i~~ak~~G~~v~~~i~~~~~-~~~~~~~~~~~~~~~~~~Ga~~i~l~-DT~- 172 (275)
T cd07937 96 FVEKAAKNGIDIFRIFDALNDVRNLEVAIKAVKKAGKHVEGAICYTGS-PVHTLEYYVKLAKELEDMGADSICIK-DMA- 172 (275)
T ss_pred HHHHHHHcCCCEEEEeecCChHHHHHHHHHHHHHCCCeEEEEEEecCC-CCCCHHHHHHHHHHHHHcCCCEEEEc-CCC-
Confidence 3556778888877643221111 2333344444433221111111111 22344444444444437888876432 222
Q ss_pred CccCCHHHHHHHHHHHHH-cCCcEEEecCChhh
Q 014320 209 SFMINDELLIEGFKRCKS-LGALAMVHAENGDA 240 (427)
Q Consensus 209 ~~~~~~~~l~~~~~~a~~-~g~~v~~H~e~~~~ 240 (427)
...+++.+.++++..++ .++++.+|+.++..
T Consensus 173 -G~~~P~~v~~lv~~l~~~~~~~l~~H~Hnd~G 204 (275)
T cd07937 173 -GLLTPYAAYELVKALKKEVGLPIHLHTHDTSG 204 (275)
T ss_pred -CCCCHHHHHHHHHHHHHhCCCeEEEEecCCCC
Confidence 23578888888888765 47888889876543
No 207
>TIGR00126 deoC deoxyribose-phosphate aldolase. Deoxyribose-phosphate aldolase is involved in the catabolism of nucleotides and deoxyriibonucleotides. The catalytic process is as follows: 2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde. It is found in both gram-postive and gram-negative bacteria.
Probab=63.83 E-value=1.1e+02 Score=27.27 Aligned_cols=109 Identities=16% Similarity=0.095 Sum_probs=60.3
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHH-HhccccceeceeccccCCChhhHHHHHHHHHHcCCC
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEK-KAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGIN 198 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 198 (427)
...+.+++....+.+...|+-+++-.. ......+.... ...+...-++|+.+. ...+....+.++.+ +.|++
T Consensus 13 p~~t~~~i~~lc~~A~~~~~~avcv~p-----~~v~~a~~~l~~~~v~v~tVigFP~G~-~~~~~K~~E~~~Av-~~GAd 85 (211)
T TIGR00126 13 ADTTEEDIITLCAQAKTYKFAAVCVNP-----SYVPLAKELLKGTEVRICTVVGFPLGA-STTDVKLYETKEAI-KYGAD 85 (211)
T ss_pred CCCCHHHHHHHHHHHHhhCCcEEEeCH-----HHHHHHHHHcCCCCCeEEEEeCCCCCC-CcHHHHHHHHHHHH-HcCCC
Confidence 346788888889999999999887421 11222221111 111111113343332 12344566677777 78999
Q ss_pred eEEEEEecCC----CccCCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 199 SFKFFMAYKG----SFMINDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 199 ~ik~~~~~~~----~~~~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
-+.+.+.... ....-.+++.++.+.++ |+++.+=.|.
T Consensus 86 EiDvv~n~g~l~~g~~~~v~~ei~~i~~~~~--g~~lKvIlE~ 126 (211)
T TIGR00126 86 EVDMVINIGALKDGNEEVVYDDIRAVVEACA--GVLLKVIIET 126 (211)
T ss_pred EEEeecchHhhhCCcHHHHHHHHHHHHHHcC--CCeEEEEEec
Confidence 9988876542 22222446666666664 7766663343
No 208
>PRK07328 histidinol-phosphatase; Provisional
Probab=63.78 E-value=1.2e+02 Score=27.90 Aligned_cols=48 Identities=15% Similarity=0.044 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHhcCCCEEEEcCC-------CHHHHHHHHHHhhcCCCEEEecCcc
Q 014320 270 EATTRAIRLAEFVNTPLYVVHVM-------SMDAMEEIAKARKAGQRVIGEPVVS 317 (427)
Q Consensus 270 ~a~~~~~~~~~~~g~~~~i~H~~-------~~~~~~~i~~~~~~G~~v~~~~~p~ 317 (427)
..+.+.++.+.+.|..+-+.-.. .....+.++.+++.|++++...-.|
T Consensus 177 ~~~~~il~~~~~~g~~lEiNt~~~r~~~~~~yp~~~il~~~~~~g~~itigSDAH 231 (269)
T PRK07328 177 ELYEEALDVIAAAGLALEVNTAGLRKPVGEIYPSPALLRACRERGIPVVLGSDAH 231 (269)
T ss_pred HHHHHHHHHHHHcCCEEEEEchhhcCCCCCCCCCHHHHHHHHHcCCCEEEeCCCC
Confidence 45577778888888765554311 1112367889999999887755444
No 209
>COG1387 HIS2 Histidinol phosphatase and related hydrolases of the PHP family [Amino acid transport and metabolism / General function prediction only]
Probab=63.27 E-value=1.2e+02 Score=27.52 Aligned_cols=33 Identities=30% Similarity=0.353 Sum_probs=25.4
Q ss_pred ccccccccccCcCCCCChhhHHHHHHHHHcCCceEEe
Q 014320 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (427)
Q Consensus 107 ~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~ 143 (427)
.+|.|+|...+ .|..+.++. ++.+...|...+.
T Consensus 2 ~~D~H~HT~~s-dg~~~~~e~---~~~A~~~g~~~~~ 34 (237)
T COG1387 2 KIDLHTHTVFS-DGEATPEEM---VEAAIELGLEYIA 34 (237)
T ss_pred CcccccCcccc-cCCCCHHHH---HHHHHHcCCeEEE
Confidence 47999998877 566666655 7788888988876
No 210
>cd00953 KDG_aldolase KDG (2-keto-3-deoxygluconate) aldolases found in archaea. This subfamily of enzymes is adapted for high thermostability and shows specificity for non-phosphorylated substrates. The enzyme catalyses the reversible aldol cleavage of 2-keto-3-dexoygluconate to pyruvate and glyceraldehyde, the third step of a modified non-phosphorylated Entner-Doudoroff pathway of glucose oxidation. KDG aldolase shows no significant sequence similarity to microbial 2-keto-3-deoxyphosphogluconate (KDPG) aldolases, and the enzyme shows no activity with glyceraldehyde 3-phosphate as substrate. The enzyme is a tetramer and a member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=63.14 E-value=1.3e+02 Score=27.97 Aligned_cols=108 Identities=12% Similarity=0.022 Sum_probs=60.7
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecC--ChhhHHHHHHHHHHcCCCCccccccc--C-CHHHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE--NGDAVFEGQKRMIELGITGPEGHALS--R-PPLLE 268 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~~--~-p~~~e 268 (427)
..|++++-+.-+....+.++.++-+++++.+.+..-++.+++. +.++..+..+.+++.|..+.-..+.. . ++.
T Consensus 31 ~~Gv~Gl~~~GstGE~~~Lt~eEr~~l~~~~~~~~~~vi~gvg~~~~~~ai~~a~~a~~~Gad~v~v~~P~y~~~~~~-- 108 (279)
T cd00953 31 SKGIDYVFVAGTTGLGPSLSFQEKLELLKAYSDITDKVIFQVGSLNLEESIELARAAKSFGIYAIASLPPYYFPGIPE-- 108 (279)
T ss_pred HcCCcEEEEcccCCCcccCCHHHHHHHHHHHHHHcCCEEEEeCcCCHHHHHHHHHHHHHcCCCEEEEeCCcCCCCCCH--
Confidence 6888888665554555678888888888877664445777753 34444444566778887644332221 2 222
Q ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCHH----HHHHHHHHhh
Q 014320 269 GEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (427)
Q Consensus 269 ~~a~~~~~~~~~~~g~~~~i~H~~~~~----~~~~i~~~~~ 305 (427)
+++.+-.....+ +.++.+-+..... +.+.+.++.+
T Consensus 109 -~~i~~yf~~v~~-~lpv~iYn~P~~tg~~l~~~~l~~L~~ 147 (279)
T cd00953 109 -EWLIKYFTDISS-PYPTFIYNYPKATGYDINARMAKEIKK 147 (279)
T ss_pred -HHHHHHHHHHHh-cCCEEEEeCccccCCCCCHHHHHHHHh
Confidence 233222222222 6788887764321 2456666654
No 211
>PLN02389 biotin synthase
Probab=62.50 E-value=71 Score=31.30 Aligned_cols=121 Identities=12% Similarity=0.062 Sum_probs=60.8
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCCCcc--CCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccc
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFM--INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~--~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~ 259 (427)
++..+.+++.. ..|+..|-+..++.+... ..-+.+.++++..++.++.+.+. ......+..++|.+.|+....+.
T Consensus 119 EeIl~~a~~~~-~~G~~~~~ivts~rg~~~e~~~~e~i~eiir~ik~~~l~i~~s--~G~l~~E~l~~LkeAGld~~~~~ 195 (379)
T PLN02389 119 DDVLEAAKRAK-EAGSTRFCMGAAWRDTVGRKTNFNQILEYVKEIRGMGMEVCCT--LGMLEKEQAAQLKEAGLTAYNHN 195 (379)
T ss_pred HHHHHHHHHHH-HcCCCEEEEEecccCCCCChhHHHHHHHHHHHHhcCCcEEEEC--CCCCCHHHHHHHHHcCCCEEEee
Confidence 44445555544 567776654433322111 23467777777777766654433 22344455577888888643222
Q ss_pred c--------ccCCHHHHHHHHHHHHHHHHhcCCCE----EEEcCCCH-HHHHHHHHHhhc
Q 014320 260 A--------LSRPPLLEGEATTRAIRLAEFVNTPL----YVVHVMSM-DAMEEIAKARKA 306 (427)
Q Consensus 260 ~--------~~~p~~~e~~a~~~~~~~~~~~g~~~----~i~H~~~~-~~~~~i~~~~~~ 306 (427)
. ..++.. ..+...+.++.+++.|.++ .+.|..+. +-++.+..+++.
T Consensus 196 LeTs~~~y~~i~~~~-s~e~rl~ti~~a~~~Gi~v~sg~IiGlgEt~edrv~~l~~Lr~L 254 (379)
T PLN02389 196 LDTSREYYPNVITTR-SYDDRLETLEAVREAGISVCSGGIIGLGEAEEDRVGLLHTLATL 254 (379)
T ss_pred ecCChHHhCCcCCCC-CHHHHHHHHHHHHHcCCeEeEEEEECCCCCHHHHHHHHHHHHhc
Confidence 1 111111 2344456666677776543 33343333 234455555543
No 212
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=62.02 E-value=1.3e+02 Score=28.11 Aligned_cols=110 Identities=13% Similarity=0.118 Sum_probs=61.1
Q ss_pred H-cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc--cCCH
Q 014320 194 E-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPP 265 (427)
Q Consensus 194 ~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~--~~p~ 265 (427)
. .|++++-+.-.......++.++-.++++.+.+. .+++.+++. +.++..+..+++++.|....-..+. ..|+
T Consensus 35 ~~~Gv~gi~v~GstGE~~~Ls~eEr~~~~~~~~~~~~~~~~viagvg~~~t~~ai~~a~~a~~~Gad~v~v~~P~y~~~~ 114 (293)
T PRK04147 35 EKQGIDGLYVGGSTGEAFLLSTEEKKQVLEIVAEEAKGKVKLIAQVGSVNTAEAQELAKYATELGYDAISAVTPFYYPFS 114 (293)
T ss_pred hcCCCCEEEECCCccccccCCHHHHHHHHHHHHHHhCCCCCEEecCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcCCCCC
Confidence 5 788877554433334567888877777766542 467888863 3444444456777888755433222 1222
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEcCCCHH----HHHHHHHHhh
Q 014320 266 LLEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKARK 305 (427)
Q Consensus 266 ~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~----~~~~i~~~~~ 305 (427)
.. .-+.-..+++...+.++.+-+.+... +.+.++++.+
T Consensus 115 ~~--~l~~~f~~va~a~~lPv~iYn~P~~tg~~l~~~~l~~L~~ 156 (293)
T PRK04147 115 FE--EICDYYREIIDSADNPMIVYNIPALTGVNLSLDQFNELFT 156 (293)
T ss_pred HH--HHHHHHHHHHHhCCCCEEEEeCchhhccCCCHHHHHHHhc
Confidence 22 22333334455567788888765321 2455555543
No 213
>TIGR02318 phosphono_phnM phosphonate metabolism protein PhnM. This family consists of proteins from in the PhnM family. PhnM is a a protein associated with phosphonate utilization in a number of bacterial species. In Pseudomonas stutzeri WM88, a protein that is part of a system for the oxidation of phosphites (another form of reduced phosphorous compound) scores between trusted and noise cutoffs.
Probab=61.25 E-value=31 Score=33.75 Aligned_cols=41 Identities=20% Similarity=0.119 Sum_probs=31.5
Q ss_pred CHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcCCCCcc
Q 014320 213 NDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPE 257 (427)
Q Consensus 213 ~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~ 257 (427)
..+.++++++.|+++|+++..|. ++.+.+ +.+.+.|+...+
T Consensus 207 ~~e~i~~~v~~A~~~G~~v~sH~~~~~e~i----~~a~~~Gv~~~E 248 (376)
T TIGR02318 207 GLANRSEIAALARARGIPLASHDDDTPEHV----AEAHDLGVTISE 248 (376)
T ss_pred cHHHHHHHHHHHHHCCCeEEEecCCCHHHH----HHHHHCCCChhc
Confidence 47899999999999999999998 676655 344566764433
No 214
>TIGR03699 mena_SCO4550 menaquinone biosynthesis protein, SCO4550 family. members of this protein family are involved in menaquinone biosynthesis by an alternate pathway via futalosine.
Probab=60.95 E-value=1.5e+02 Score=28.35 Aligned_cols=124 Identities=18% Similarity=0.183 Sum_probs=69.8
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhH-----------HHHHHHHHH
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAV-----------FEGQKRMIE 250 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~-----------~~~~~~l~~ 250 (427)
++..+.++++. ..|+..+-+. ....+..+.+.+.++++..++.+..+.+|+.+..++ .+..+.+.+
T Consensus 75 eei~~~~~~~~-~~G~~~i~l~--gG~~p~~~~~~~~~li~~Ik~~~~~i~~~~~s~~ei~~~~~~~g~~~~e~l~~Lk~ 151 (340)
T TIGR03699 75 EEILQKIEELV-AYGGTQILLQ--GGVNPDLGLDYYEDLFRAIKARFPHIHIHSFSPVEIVYIAKKEGLSLREVLERLKE 151 (340)
T ss_pred HHHHHHHHHHH-HcCCcEEEEe--cCCCCCCCHHHHHHHHHHHHHHCCCcCCCCCCHHHHHHHhccCCCCHHHHHHHHHH
Confidence 44455555554 5777666442 222344577788888998888776677776544332 445577888
Q ss_pred cCCCCcccc-c-----c----cCCHHHHHHHHHHHHHHHHhcCCC----EEEEcCCCH-HHHHHHHHHhhcCC
Q 014320 251 LGITGPEGH-A-----L----SRPPLLEGEATTRAIRLAEFVNTP----LYVVHVMSM-DAMEEIAKARKAGQ 308 (427)
Q Consensus 251 ~G~~~~~~~-~-----~----~~p~~~e~~a~~~~~~~~~~~g~~----~~i~H~~~~-~~~~~i~~~~~~G~ 308 (427)
.|+....+. . . ..|.........+.++.+++.|.+ ..+.|..+. +-++.+..+++.+.
T Consensus 152 aG~~~~~~~g~E~~~~~~~~~~~~~~~s~~~~l~~i~~a~~~Gi~v~~~~iiGlgEt~ed~~~~l~~l~~l~~ 224 (340)
T TIGR03699 152 AGLDSIPGGGAEILSDRVRKIISPKKISSEEWLEVMETAHKLGLPTTATMMFGHVETLEDRIEHLERIRELQD 224 (340)
T ss_pred cCCCcCCCCcccccCHHHHHhhCCCCCCHHHHHHHHHHHHHcCCCccceeEeeCCCCHHHHHHHHHHHHHhch
Confidence 888543321 0 0 112222233446677777777754 445554443 33555666666553
No 215
>cd00959 DeoC 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family. DERA belongs to the class I aldolases and catalyzes a reversible aldol reaction between acetaldehyde and glyceraldehyde 3-phosphate to generate 2-deoxyribose 5-phosphate. DERA is unique in catalyzing the aldol reaction between two aldehydes, and its broad substrate specificity confers considerable utility as a biocatalyst, offering an environmentally benign alternative to chiral transition metal catalysis of the asymmetric aldol reaction.
Probab=60.87 E-value=1.2e+02 Score=26.70 Aligned_cols=101 Identities=17% Similarity=0.091 Sum_probs=55.8
Q ss_pred CCChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccc----eeceeccccCCChhhHHHHHHHHHHcC
Q 014320 121 SETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCM----DYGFHMAITKWDEVVSDEMEVMVKEKG 196 (427)
Q Consensus 121 ~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~g 196 (427)
..+.+++....+.+...|+..++-.. ..++...+......+ ..+|+.+. ...+....++++.+ +.|
T Consensus 13 ~~t~~~i~~~~~~a~~~~~~av~v~p--------~~v~~~~~~l~~~~~~v~~~~~fp~g~-~~~~~k~~eve~A~-~~G 82 (203)
T cd00959 13 DATEEDIRKLCDEAKEYGFAAVCVNP--------CFVPLAREALKGSGVKVCTVIGFPLGA-TTTEVKVAEAREAI-ADG 82 (203)
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcH--------HHHHHHHHHcCCCCcEEEEEEecCCCC-CcHHHHHHHHHHHH-HcC
Confidence 34677787888888998988887431 112222222111111 12222222 22344566678877 789
Q ss_pred CCeEEEEEecCCC----ccCCHHHHHHHHHHHHHcCCcEEE
Q 014320 197 INSFKFFMAYKGS----FMINDELLIEGFKRCKSLGALAMV 233 (427)
Q Consensus 197 ~~~ik~~~~~~~~----~~~~~~~l~~~~~~a~~~g~~v~~ 233 (427)
++.+.+.+.+... .....+++.++.+.++ |+++.+
T Consensus 83 Adevdvv~~~g~~~~~~~~~~~~ei~~v~~~~~--g~~lkv 121 (203)
T cd00959 83 ADEIDMVINIGALKSGDYEAVYEEIAAVVEACG--GAPLKV 121 (203)
T ss_pred CCEEEEeecHHHHhCCCHHHHHHHHHHHHHhcC--CCeEEE
Confidence 9999888765321 1112345666666665 677655
No 216
>PF01791 DeoC: DeoC/LacD family aldolase; InterPro: IPR002915 This family includes the enzyme deoxyribose-phosphate aldolase, which is involved in nucleotide metabolism. 2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde The family also includes a group of related bacterial proteins of unknown function, see examples Q57843 from SWISSPROT and P76143 from SWISSPROT.; GO: 0016829 lyase activity; PDB: 2A4A_A 1VCV_B 1P1X_A 1KTN_B 1JCL_A 1JCJ_A 1MZH_A 3GKF_D 3GLC_L 3GND_N ....
Probab=59.71 E-value=43 Score=30.25 Aligned_cols=104 Identities=15% Similarity=0.133 Sum_probs=58.7
Q ss_pred hHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccccCCChhh-----HHHHHHHHHHcCCCeE
Q 014320 126 DFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVV-----SDEMEVMVKEKGINSF 200 (427)
Q Consensus 126 ~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~g~~~i 200 (427)
++....+.++..|+.+++-.. .......+.+.....+..+-.++..+. ...+.. ..++++.+ +.|++.+
T Consensus 20 ~~~~~~~~a~~~~~~av~v~p----~~~~~~~~~~~~~~~~~~~vi~fp~g~-~~~~~k~~~~~~~~ve~A~-~~GAd~v 93 (236)
T PF01791_consen 20 DIKKLCREAIEYGFDAVCVTP----GYVKPAAELLAGSGVKVGLVIGFPFGT-STTEPKGYDQIVAEVEEAI-RLGADEV 93 (236)
T ss_dssp HHHHHHHHHHHHTSSEEEEEG----GGHHHHHHHSTTSTSEEEEEESTTTSS-STHHHHTCEEEHHHHHHHH-HTT-SEE
T ss_pred hHHHHHHHHHHhCCCEEEECH----HHHHHHHHHhhccccccceEEEeCCCC-CccccccccchHHHHHHHH-HcCCcee
Confidence 677778888888999887321 111111111111011111112222111 112223 56677777 8999999
Q ss_pred EEEEecC----CCccCCHHHHHHHHHHHHHcCCcEEEec
Q 014320 201 KFFMAYK----GSFMINDELLIEGFKRCKSLGALAMVHA 235 (427)
Q Consensus 201 k~~~~~~----~~~~~~~~~l~~~~~~a~~~g~~v~~H~ 235 (427)
++.+.+. +....-.+++.++.+.|+++++++.+.+
T Consensus 94 d~vi~~~~~~~~~~~~~~~~i~~v~~~~~~~gl~vIlE~ 132 (236)
T PF01791_consen 94 DVVINYGALGSGNEDEVIEEIAAVVEECHKYGLKVILEP 132 (236)
T ss_dssp EEEEEHHHHHTTHHHHHHHHHHHHHHHHHTSEEEEEEEE
T ss_pred eeeccccccccccHHHHHHHHHHHHHHHhcCCcEEEEEE
Confidence 9988762 1111234688899999999999999995
No 217
>PRK11572 copper homeostasis protein CutC; Provisional
Probab=59.38 E-value=1.4e+02 Score=27.22 Aligned_cols=174 Identities=9% Similarity=-0.009 Sum_probs=85.1
Q ss_pred HHHHHcCCceEEec---CcCCCCCcHHHHHHHHHHHhccccce--eceeccccCCChhhHHHHHHHH---HHcCCCeEEE
Q 014320 131 QAAALAGGTTMHID---FVIPINGSLTAGFEAYEKKAKNSCMD--YGFHMAITKWDEVVSDEMEVMV---KEKGINSFKF 202 (427)
Q Consensus 131 ~~~~l~~GvTtv~d---~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~---~~~g~~~ik~ 202 (427)
+..|.++|-.-+-= +...+.++....++...+.. ..++. +....+....+++.++.|.+-+ ++.|+++|-+
T Consensus 14 a~~A~~~GAdRiELc~~L~~GGlTPS~g~i~~~~~~~-~ipv~vMIRPR~gdF~Ys~~E~~~M~~di~~~~~~GadGvV~ 92 (248)
T PRK11572 14 ALTAQQAGADRIELCAAPKEGGLTPSLGVLKSVRERV-TIPVHPIIRPRGGDFCYSDGEFAAMLEDIATVRELGFPGLVT 92 (248)
T ss_pred HHHHHHcCCCEEEEccCcCCCCcCCCHHHHHHHHHhc-CCCeEEEEecCCCCCCCCHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 55677777776541 11111123344454444432 12222 2222221122333343333322 2689998755
Q ss_pred EEecCCCccCCHHHHHHHHHHHHHcCCcEEEe-cCCh-hhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHH
Q 014320 203 FMAYKGSFMINDELLIEGFKRCKSLGALAMVH-AENG-DAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAE 280 (427)
Q Consensus 203 ~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H-~e~~-~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~ 280 (427)
..-. ....++.+.++++++.|+ +++++.| +-+. .......+.+.+.|+...-.+..... . .+.+....++..
T Consensus 93 G~L~-~dg~vD~~~~~~Li~~a~--~~~vTFHRAfD~~~d~~~al~~l~~lG~~rILTSGg~~~-a--~~g~~~L~~lv~ 166 (248)
T PRK11572 93 GVLD-VDGHVDMPRMRKIMAAAG--PLAVTFHRAFDMCANPLNALKQLADLGVARILTSGQQQD-A--EQGLSLIMELIA 166 (248)
T ss_pred eeEC-CCCCcCHHHHHHHHHHhc--CCceEEechhhccCCHHHHHHHHHHcCCCEEECCCCCCC-H--HHHHHHHHHHHH
Confidence 3321 233578999999999984 8899999 5332 33445567788888754433322211 1 233333444444
Q ss_pred hcCCCEEEEcCC--CHHHHHHHHHHhhcCCCEEEecC
Q 014320 281 FVNTPLYVVHVM--SMDAMEEIAKARKAGQRVIGEPV 315 (427)
Q Consensus 281 ~~g~~~~i~H~~--~~~~~~~i~~~~~~G~~v~~~~~ 315 (427)
..+.+. |.-.. +.+.++.+ .+.|+.-++..+
T Consensus 167 ~a~~~~-Im~GgGV~~~Nv~~l---~~tG~~~~H~s~ 199 (248)
T PRK11572 167 ASDGPI-IMAGAGVRLSNLHKF---LDAGVREVHSSA 199 (248)
T ss_pred hcCCCE-EEeCCCCCHHHHHHH---HHcCCCEEeeCC
Confidence 444343 33333 33333333 357766555333
No 218
>PRK05835 fructose-bisphosphate aldolase; Provisional
Probab=58.93 E-value=1.6e+02 Score=27.80 Aligned_cols=48 Identities=21% Similarity=0.178 Sum_probs=32.3
Q ss_pred HHHHHHHHHHcCCCeEEEEEec-CC------CccCCHHHHHHHHHHHHHcCCcEEEec
Q 014320 185 SDEMEVMVKEKGINSFKFFMAY-KG------SFMINDELLIEGFKRCKSLGALAMVHA 235 (427)
Q Consensus 185 ~~~~~~l~~~~g~~~ik~~~~~-~~------~~~~~~~~l~~~~~~a~~~g~~v~~H~ 235 (427)
.++..+.+++-|++.+-+.++. || .+.++.+.|+++.+ ..++|+..|-
T Consensus 157 PeeA~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~L~f~~L~~I~~---~~~iPLVLHG 211 (307)
T PRK05835 157 PKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKR---LTNIPLVLHG 211 (307)
T ss_pred HHHHHHHHHhhCCCEEEEccCccccccCCCCCCccCHHHHHHHHH---HhCCCEEEeC
Confidence 4566777767799987665542 33 34466777777633 4589999995
No 219
>PF01116 F_bP_aldolase: Fructose-bisphosphate aldolase class-II; InterPro: IPR000771 Fructose-bisphosphate aldolase [, ] is a glycolytic enzyme that catalyses the reversible aldol cleavage or condensation of fructose-1,6-bisphosphate into dihydroxyacetone-phosphate and glyceraldehyde 3-phosphate. There are two classes of fructose-bisphosphate aldolases with different catalytic mechanisms. Class-II aldolases [], mainly found in prokaryotes and fungi, are homodimeric enzymes, which require a divalent metal ion, generally zinc, for their activity. This family also includes the Escherichia coli galactitol operon protein, gatY, which catalyses the transformation of tagatose 1,6-bisphosphate into glycerone phosphate and D-glyceraldehyde 3-phosphate; and E. coli N-acetyl galactosamine operon protein, agaY, which catalyses the same reaction. There are two histidine residues in the first half of the sequence of these enzymes that have been shown to be involved in binding a zinc ion [].; GO: 0008270 zinc ion binding, 0016832 aldehyde-lyase activity, 0005975 carbohydrate metabolic process; PDB: 3Q94_A 1RVG_B 1RV8_C 3C4U_A 3C56_B 3C52_A 2FJK_A 3N9R_P 3N9S_A 1GVF_B ....
Probab=58.73 E-value=95 Score=29.09 Aligned_cols=50 Identities=16% Similarity=0.232 Sum_probs=31.9
Q ss_pred HHHHHHHHHHcCCCeEEEEEec-CC------CccCCHHHHHHHHHHHHHcCCcEEEecC
Q 014320 185 SDEMEVMVKEKGINSFKFFMAY-KG------SFMINDELLIEGFKRCKSLGALAMVHAE 236 (427)
Q Consensus 185 ~~~~~~l~~~~g~~~ik~~~~~-~~------~~~~~~~~l~~~~~~a~~~g~~v~~H~e 236 (427)
.++..+++++-|++.+-+.++. || .+.++.+.|+++.+... ++|+..|--
T Consensus 157 P~~a~~Fv~~TgvD~LAvaiGt~HG~y~~~~~p~Ld~~~L~~I~~~~~--~iPLVlHGg 213 (287)
T PF01116_consen 157 PEEAKEFVEETGVDALAVAIGTAHGMYKGGKKPKLDFDRLKEIREAVP--DIPLVLHGG 213 (287)
T ss_dssp HHHHHHHHHHHTTSEEEE-SSSBSSSBSSSSSTC--HHHHHHHHHHHH--TSEEEESSC
T ss_pred HHHHHHHHHHhCCCEEEEecCccccccCCCCCcccCHHHHHHHHHhcC--CCCEEEECC
Confidence 4667777777899998776652 33 34455666666655443 999999953
No 220
>PRK08005 epimerase; Validated
Probab=58.62 E-value=1.3e+02 Score=26.66 Aligned_cols=46 Identities=4% Similarity=-0.021 Sum_probs=28.5
Q ss_pred HHHHHHHHHcCCCeEEE-EEecCCCc--cCCHHHHHHHHHHHHHcCCcEEEec
Q 014320 186 DEMEVMVKEKGINSFKF-FMAYKGSF--MINDELLIEGFKRCKSLGALAMVHA 235 (427)
Q Consensus 186 ~~~~~l~~~~g~~~ik~-~~~~~~~~--~~~~~~l~~~~~~a~~~g~~v~~H~ 235 (427)
++++++. ..|++.+.+ .|+.+..+ ++.++.++.+.+. ..+++.+|.
T Consensus 17 ~el~~l~-~~g~d~lHiDvMDG~FVPN~tfG~~~i~~l~~~---t~~~~DvHL 65 (210)
T PRK08005 17 EALTALH-DAPLGSLHLDIEDTSFINNITFGMKTIQAVAQQ---TRHPLSFHL 65 (210)
T ss_pred HHHHHHH-HCCCCEEEEeccCCCcCCccccCHHHHHHHHhc---CCCCeEEEe
Confidence 4455555 678887765 34444433 3456677666543 478899995
No 221
>PRK15452 putative protease; Provisional
Probab=58.54 E-value=1.7e+02 Score=29.42 Aligned_cols=49 Identities=18% Similarity=0.108 Sum_probs=30.6
Q ss_pred HHHHHHHHHHcCCCeEEEEEecCC----CccCCHHHHHHHHHHHHHcCCcEEEe
Q 014320 185 SDEMEVMVKEKGINSFKFFMAYKG----SFMINDELLIEGFKRCKSLGALAMVH 234 (427)
Q Consensus 185 ~~~~~~l~~~~g~~~ik~~~~~~~----~~~~~~~~l~~~~~~a~~~g~~v~~H 234 (427)
++.++.++ ..|++.+-+.....+ ...++.+.++++++.|+++|+.+.+-
T Consensus 13 ~e~l~aAi-~~GADaVY~G~~~~~~R~~~~~f~~edl~eav~~ah~~g~kvyvt 65 (443)
T PRK15452 13 LKNMRYAF-AYGADAVYAGQPRYSLRVRNNEFNHENLALGINEAHALGKKFYVV 65 (443)
T ss_pred HHHHHHHH-HCCCCEEEECCCccchhhhccCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 34555556 678887644221111 12356688888899999888877665
No 222
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.
Probab=57.38 E-value=1.7e+02 Score=27.36 Aligned_cols=110 Identities=15% Similarity=0.111 Sum_probs=60.5
Q ss_pred Hc-CCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc--cCCH
Q 014320 194 EK-GINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPP 265 (427)
Q Consensus 194 ~~-g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~--~~p~ 265 (427)
.. |++++-+.-.....+.++.++-+++++.+.+. .+++.+++. +.++..+..+++++.|....-..+. ..|+
T Consensus 32 ~~~Gv~gi~~~GstGE~~~Lt~~Er~~~~~~~~~~~~~~~~viagv~~~~~~~ai~~a~~a~~~Gad~v~~~~P~y~~~~ 111 (288)
T cd00954 32 EKQGVDGLYVNGSTGEGFLLSVEERKQIAEIVAEAAKGKVTLIAHVGSLNLKESQELAKHAEELGYDAISAITPFYYKFS 111 (288)
T ss_pred hcCCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCeEEeccCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCCCC
Confidence 56 88887555444444667888887777766542 467888863 3344444446677888654322111 1233
Q ss_pred HHHHHHHHHHHHHHHhc-CCCEEEEcCCCHH----HHHHHHHHhh
Q 014320 266 LLEGEATTRAIRLAEFV-NTPLYVVHVMSMD----AMEEIAKARK 305 (427)
Q Consensus 266 ~~e~~a~~~~~~~~~~~-g~~~~i~H~~~~~----~~~~i~~~~~ 305 (427)
..+. +.-...++... +.++.+-+..... +.+.+.++.+
T Consensus 112 ~~~i--~~~~~~v~~a~~~lpi~iYn~P~~tg~~l~~~~~~~L~~ 154 (288)
T cd00954 112 FEEI--KDYYREIIAAAASLPMIIYHIPALTGVNLTLEQFLELFE 154 (288)
T ss_pred HHHH--HHHHHHHHHhcCCCCEEEEeCccccCCCCCHHHHHHHhc
Confidence 3232 22333344456 6788777765321 2355555543
No 223
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=57.35 E-value=55 Score=25.71 Aligned_cols=48 Identities=15% Similarity=0.081 Sum_probs=27.1
Q ss_pred HHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCCh
Q 014320 188 MEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (427)
Q Consensus 188 ~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~ 238 (427)
+++.++..|...+.+=+.. ...+.+.+....+...+...||.+||-+.
T Consensus 49 ~~~~a~~~Gl~y~~iPv~~---~~~~~~~v~~f~~~l~~~~~Pvl~hC~sG 96 (110)
T PF04273_consen 49 EAAAAEALGLQYVHIPVDG---GAITEEDVEAFADALESLPKPVLAHCRSG 96 (110)
T ss_dssp HHHHHHHCT-EEEE----T---TT--HHHHHHHHHHHHTTTTSEEEE-SCS
T ss_pred HHHHHHHcCCeEEEeecCC---CCCCHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 4444446676655443332 23577888888877777888999999543
No 224
>PRK06256 biotin synthase; Validated
Probab=56.25 E-value=74 Score=30.42 Aligned_cols=40 Identities=10% Similarity=-0.031 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHhcCCC----EEEEcCCC-HHHHHHHHHHhhcCCC
Q 014320 270 EATTRAIRLAEFVNTP----LYVVHVMS-MDAMEEIAKARKAGQR 309 (427)
Q Consensus 270 ~a~~~~~~~~~~~g~~----~~i~H~~~-~~~~~~i~~~~~~G~~ 309 (427)
+...+.++.+++.|.+ +.+.+..+ .+-.+.++.+++.++.
T Consensus 187 ~~~i~~i~~a~~~Gi~v~~~~I~GlgEt~ed~~~~~~~l~~l~~~ 231 (336)
T PRK06256 187 EDRIDTCEMVKAAGIEPCSGGIIGMGESLEDRVEHAFFLKELDAD 231 (336)
T ss_pred HHHHHHHHHHHHcCCeeccCeEEeCCCCHHHHHHHHHHHHhCCCC
Confidence 3444566666666653 22323222 2334556666666654
No 225
>PRK08185 hypothetical protein; Provisional
Probab=54.91 E-value=1.8e+02 Score=27.13 Aligned_cols=103 Identities=15% Similarity=0.084 Sum_probs=57.0
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCccccc
Q 014320 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHA 260 (427)
Q Consensus 181 ~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~ 260 (427)
+-+..+.+-+..++.+...|- .+++........+...-+...|++..+||.+|.......+.+ +...+.|+.+.-.-.
T Consensus 22 n~e~~~avi~AAee~~sPvIl-~~~~~~~~~~~~~~~~~~~~~a~~~~vPV~lHLDHg~~~e~i-~~ai~~Gf~SVM~D~ 99 (283)
T PRK08185 22 DSCFLRAVVEEAEANNAPAII-AIHPNELDFLGDNFFAYVRERAKRSPVPFVIHLDHGATIEDV-MRAIRCGFTSVMIDG 99 (283)
T ss_pred CHHHHHHHHHHHHHhCCCEEE-EeCcchhhhccHHHHHHHHHHHHHCCCCEEEECCCCCCHHHH-HHHHHcCCCEEEEeC
Confidence 444555555555455555442 122221112234445556667888999999998544333333 344567765432222
Q ss_pred ccCCHHHHHHHHHHHHHHHHhcCCC
Q 014320 261 LSRPPLLEGEATTRAIRLAEFVNTP 285 (427)
Q Consensus 261 ~~~p~~~e~~a~~~~~~~~~~~g~~ 285 (427)
...|..-......+..+++...|+.
T Consensus 100 S~l~~eeNi~~t~~vv~~a~~~gv~ 124 (283)
T PRK08185 100 SLLPYEENVALTKEVVELAHKVGVS 124 (283)
T ss_pred CCCCHHHHHHHHHHHHHHHHHcCCe
Confidence 3355555556667777777777764
No 226
>TIGR00167 cbbA ketose-bisphosphate aldolases. fructose-bisphosphate and tagatose-bisphosphate aldolase.
Probab=54.65 E-value=1.9e+02 Score=27.15 Aligned_cols=122 Identities=20% Similarity=0.127 Sum_probs=0.0
Q ss_pred HHHHHHHHcCCceEEe-cCcCCCCCcHHHHHHHHHHHhccccceeceeccccCCChhhH------------HHHHHHHHH
Q 014320 128 FSGQAAALAGGTTMHI-DFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVS------------DEMEVMVKE 194 (427)
Q Consensus 128 ~~~~~~~l~~GvTtv~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~l~~~ 194 (427)
....+.++..|+|+++ |....+.....+.-+...+......+.+-.-.+.....++.. ++.++++++
T Consensus 90 ~e~i~~ai~~GftSVMiDgS~lp~eeNi~~T~~vv~~Ah~~gv~VEaElG~vgg~e~~~~~~~~~~~~T~peea~~Fv~~ 169 (288)
T TIGR00167 90 EEDCAQAVKAGFSSVMIDGSHEPFEENIELTKKVVERAHKMGVSVEAELGTLGGEEDGVSVADESALYTDPEEAKEFVKL 169 (288)
T ss_pred HHHHHHHHHcCCCEEEecCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCccCCcccccccccCCCHHHHHHHHhc
Q ss_pred cCCCeEEEEEe-----cCCCcc-CCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCC
Q 014320 195 KGINSFKFFMA-----YKGSFM-INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGI 253 (427)
Q Consensus 195 ~g~~~ik~~~~-----~~~~~~-~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~ 253 (427)
-|++.+-+.++ |.+.+. ++.+.|+++-+.. ++|+..|-.+.-..++ .+++.+.|+
T Consensus 170 TgvD~LAvaiGt~HG~y~~~p~~Ld~~~L~~I~~~v---~vPLVlHGgSG~~~e~-~~~ai~~Gi 230 (288)
T TIGR00167 170 TGVDSLAAAIGNVHGVYKGEPKGLDFERLEEIQKYV---NLPLVLHGGSGIPDEE-IKKAISLGV 230 (288)
T ss_pred cCCcEEeeccCccccccCCCCCccCHHHHHHHHHHh---CCCEEEeCCCCCCHHH-HHHHHHcCC
No 227
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=54.51 E-value=1.3e+02 Score=26.51 Aligned_cols=98 Identities=12% Similarity=0.046 Sum_probs=58.5
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHcCCCeEE
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFK 201 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik 201 (427)
.+.++....++.++.+|++.+--.... ....+.++..++..++ +.++. + +-.+ .+++++.+ ..|++.+
T Consensus 13 ~~~~~a~~ia~al~~gGi~~iEit~~t--p~a~~~I~~l~~~~~~--~~vGA--G-TVl~---~e~a~~ai-~aGA~Fi- 80 (201)
T PRK06015 13 DDVEHAVPLARALAAGGLPAIEITLRT--PAALDAIRAVAAEVEE--AIVGA--G-TILN---AKQFEDAA-KAGSRFI- 80 (201)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCC--ccHHHHHHHHHHHCCC--CEEee--E-eCcC---HHHHHHHH-HcCCCEE-
Confidence 356666677888999999987643221 2345566665544433 22222 1 1112 33556666 6788765
Q ss_pred EEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhH
Q 014320 202 FFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAV 241 (427)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~ 241 (427)
++| .++ .++++.|+++|+++.-=+-++.++
T Consensus 81 --vSP----~~~----~~vi~~a~~~~i~~iPG~~TptEi 110 (201)
T PRK06015 81 --VSP----GTT----QELLAAANDSDVPLLPGAATPSEV 110 (201)
T ss_pred --ECC----CCC----HHHHHHHHHcCCCEeCCCCCHHHH
Confidence 232 234 466677889999988777777665
No 228
>PF01244 Peptidase_M19: Membrane dipeptidase (Peptidase family M19); InterPro: IPR008257 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of peptidases belong to the MEROPS peptidase family M19 (membrane dipeptidase family, clan MJ). The protein fold of the peptidase domain for members of this family resembles that of Klebsiella urease, the type example for clan MJ. Renal dipeptidase (rDP) (3.4.13.19 from EC), also known as microsomal dipeptidase, is a zinc-dependent metalloenzyme that hydrolyzes a wide range of dipeptides. It is involved in renal metabolism of glutathione and its conjugates. It is a homodimeric disulphide-linked glycoprotein attached to the renal brush border microvilli membrane by a GPI-anchor. A glutamate residue has recently been shown [,] to be important for the catalytic activity of rDP. rDP seems to be evolutionary related to hypothetical proteins in the PQQ biosynthesis operons of Acinetobacter calcoaceticus and Klebsiella pneumoniae.; GO: 0008235 metalloexopeptidase activity, 0008239 dipeptidyl-peptidase activity, 0016805 dipeptidase activity, 0006508 proteolysis; PDB: 3NEH_B 2RAG_D 3LU2_A 3B40_A 3LY0_A 3FDG_B 2I5G_B 3S2J_A 3S2N_A 3S2L_A ....
Probab=54.37 E-value=56 Score=31.18 Aligned_cols=112 Identities=16% Similarity=0.218 Sum_probs=55.7
Q ss_pred CCCEEEEcCCC---------HHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCC-cccHHHH
Q 014320 283 NTPLYVVHVMS---------MDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRA-SGHNKAL 352 (427)
Q Consensus 283 g~~~~i~H~~~---------~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~-~~~~~~l 352 (427)
..|+.++|... .. -++++..+++|--|-...+|.++ .+..- ..+.+.. ..+.+.+
T Consensus 194 ~~PviaSHSn~ral~~h~RNlt-De~iraia~~GGviGi~~~~~fl--~~~~~------------~~~~~~~~~~Hi~y~ 258 (320)
T PF01244_consen 194 KKPVIASHSNARALCPHPRNLT-DEQIRAIAERGGVIGINFYPAFL--GDDWD------------PRASLDDLVDHIDYI 258 (320)
T ss_dssp SSEEEECCEEBTTTS--TTSB--HHHHHHHHHTT-EEEEESSHHHH--STTHS------------SG-BHHHHHHHHHHH
T ss_pred CCCEEEeccChHhhCCCCCCCC-HHHHHHHHHCCcEEEEEcchhhh--ccccc------------ccccHHHHHHHHHHH
Confidence 46777777642 23 37788888888666665565433 21100 0011100 0011222
Q ss_pred HHHHhcCC-ceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhc
Q 014320 353 QAALATGI-LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGR 425 (427)
Q Consensus 353 ~~~l~~G~-~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~ 425 (427)
.+.. |+ .+.||||..... ..+.|+... ..+|.+...+. +.+++-+++-+.+-.|.-|
T Consensus 259 ~~l~--G~dhVgiGsDfdg~~------------~~~~gl~~~-~~~~~l~~~L~-~rG~s~~~i~kI~g~N~lR 316 (320)
T PF01244_consen 259 VDLV--GIDHVGIGSDFDGID------------GPPEGLEDP-SDLPNLTEELL-KRGYSEEDIEKILGGNFLR 316 (320)
T ss_dssp HHHH---GGGEEEE--BTTTS------------SHBBTBSSG-GGHHHHHHHHH-HTTS-HHHHHHHHTHHHHH
T ss_pred HHhc--CCCeEEECcccCCCC------------CCCCccCCH-HHHHHHHHHHH-HCCCCHHHHHHHHhHhHHH
Confidence 2222 43 599999962111 113344443 35676665554 4679999999998888654
No 229
>PRK09856 fructoselysine 3-epimerase; Provisional
Probab=53.88 E-value=1.8e+02 Score=26.66 Aligned_cols=47 Identities=4% Similarity=-0.086 Sum_probs=30.7
Q ss_pred HHHHHHHHcCCCeEEEEEecCC--CccCCHHHHHHHHHHHHHcCCcEEEe
Q 014320 187 EMEVMVKEKGINSFKFFMAYKG--SFMINDELLIEGFKRCKSLGALAMVH 234 (427)
Q Consensus 187 ~~~~l~~~~g~~~ik~~~~~~~--~~~~~~~~l~~~~~~a~~~g~~v~~H 234 (427)
.++.+. +.|.+++.++..... .+..+...++++.+.++++|+.+..+
T Consensus 18 ~l~~~~-~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~~~~~gl~v~s~ 66 (275)
T PRK09856 18 AFRDAS-ELGYDGIEIWGGRPHAFAPDLKAGGIKQIKALAQTYQMPIIGY 66 (275)
T ss_pred HHHHHH-HcCCCEEEEccCCccccccccCchHHHHHHHHHHHcCCeEEEe
Confidence 344433 788888887643211 12244567888888889999988765
No 230
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=53.64 E-value=1.7e+02 Score=26.22 Aligned_cols=49 Identities=18% Similarity=0.081 Sum_probs=29.4
Q ss_pred HHHHHHHHHcCCCeEEE-EEecCCCccC--CHHHHHHHHHHHHHcCCcEEEec--CCh
Q 014320 186 DEMEVMVKEKGINSFKF-FMAYKGSFMI--NDELLIEGFKRCKSLGALAMVHA--ENG 238 (427)
Q Consensus 186 ~~~~~l~~~~g~~~ik~-~~~~~~~~~~--~~~~l~~~~~~a~~~g~~v~~H~--e~~ 238 (427)
++++++. +.|++.+.+ .|+.+..+.. .++.+.++.+ ...+++.+|. +++
T Consensus 20 ~el~~~~-~agad~iH~DVMDghFVPNiTfGp~~v~~l~~---~t~~p~DvHLMV~~p 73 (220)
T COG0036 20 EELKALE-AAGADLIHIDVMDGHFVPNITFGPPVVKALRK---ITDLPLDVHLMVENP 73 (220)
T ss_pred HHHHHHH-HcCCCEEEEeccCCCcCCCcccCHHHHHHHhh---cCCCceEEEEecCCH
Confidence 3455554 688988865 3555555443 4555555443 3468999994 554
No 231
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=53.40 E-value=1.8e+02 Score=26.61 Aligned_cols=64 Identities=13% Similarity=-0.006 Sum_probs=36.6
Q ss_pred ChhhHHHHHHHHHHcCCCeE-EEEEecC----CCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHH
Q 014320 181 DEVVSDEMEVMVKEKGINSF-KFFMAYK----GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEG 244 (427)
Q Consensus 181 ~~~~~~~~~~l~~~~g~~~i-k~~~~~~----~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~ 244 (427)
.++...++.+..++.|+..+ |-...++ .......+-++.+.+.+++.|+++..-+.+...++..
T Consensus 27 s~e~~~~~a~~~~~~g~~~~r~g~~kpRts~~sf~G~G~~gl~~L~~~~~~~Gl~~~Tev~d~~~v~~~ 95 (250)
T PRK13397 27 SYDHIRLAASSAKKLGYNYFRGGAYKPRTSAASFQGLGLQGIRYLHEVCQEFGLLSVSEIMSERQLEEA 95 (250)
T ss_pred CHHHHHHHHHHHHHcCCCEEEecccCCCCCCcccCCCCHHHHHHHHHHHHHcCCCEEEeeCCHHHHHHH
Confidence 44444444444545666533 2222222 1222456778888888888888888776666555444
No 232
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=52.62 E-value=1.9e+02 Score=26.73 Aligned_cols=110 Identities=11% Similarity=-0.082 Sum_probs=57.6
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHhccccceeceeccccC-CChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAKNSCMDYGFHMAITK-WDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ 192 (427)
+..+.+.+....+..+..|+..+.-.+..+.. +.. +.++...+... ..+. +..+... ..++.++..+...
T Consensus 16 g~iD~~~~~~~i~~l~~~Gv~gl~v~GstGE~~~lt~~Er~~l~~~~~~~~~-~~~~--vi~gv~~~~~~~~~~~a~~a~ 92 (284)
T cd00950 16 GSVDFDALERLIEFQIENGTDGLVVCGTTGESPTLSDEEHEAVIEAVVEAVN-GRVP--VIAGTGSNNTAEAIELTKRAE 92 (284)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECCCCcchhhCCHHHHHHHHHHHHHHhC-CCCc--EEeccCCccHHHHHHHHHHHH
Confidence 45667777777888899999998866543322 222 22232222221 1111 1122222 2334444444443
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHH-HHHHHHHcCCcEEEec
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+.. +.....+++.+.+ .-+.++..++++.++.
T Consensus 93 -~~G~d~v~~~~--P~~~~~~~~~l~~~~~~ia~~~~~pi~lYn 133 (284)
T cd00950 93 -KAGADAALVVT--PYYNKPSQEGLYAHFKAIAEATDLPVILYN 133 (284)
T ss_pred -HcCCCEEEEcc--cccCCCCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 78988775532 2222335555555 4444565789999883
No 233
>PRK12857 fructose-1,6-bisphosphate aldolase; Reviewed
Probab=52.49 E-value=2e+02 Score=26.88 Aligned_cols=49 Identities=14% Similarity=0.246 Sum_probs=33.4
Q ss_pred HHHHHHHHHHcCCCeEEEEEec-C----CCccCCHHHHHHHHHHHHHcCCcEEEecC
Q 014320 185 SDEMEVMVKEKGINSFKFFMAY-K----GSFMINDELLIEGFKRCKSLGALAMVHAE 236 (427)
Q Consensus 185 ~~~~~~l~~~~g~~~ik~~~~~-~----~~~~~~~~~l~~~~~~a~~~g~~v~~H~e 236 (427)
.++..+.+++-|++.+-+.++. | +.+.++.+.|+++-+. .++|+..|-.
T Consensus 157 pe~a~~Fv~~TgvD~LAvaiGt~HG~y~~~p~Ld~~~L~~i~~~---~~vPLVlHGg 210 (284)
T PRK12857 157 PEEARRFVEETGVDALAIAIGTAHGPYKGEPKLDFDRLAKIKEL---VNIPIVLHGS 210 (284)
T ss_pred HHHHHHHHHHHCCCEEeeccCccccccCCCCcCCHHHHHHHHHH---hCCCEEEeCC
Confidence 4566677766799887665542 3 3455777888777553 4899999953
No 234
>PF02811 PHP: PHP domain; InterPro: IPR004013 The PHP (Polymerase and Histidinol Phosphatase) domain is a putative phosphoesterase domain. This family is often associated with an N-terminal region IPR003141 from INTERPRO.; GO: 0003824 catalytic activity; PDB: 2WJE_A 3QY8_A 2WJD_A 2WJF_A 1PB0_B 1M68_A 1M65_A 3E38_B 2W9M_A 3E0F_A ....
Probab=51.65 E-value=13 Score=31.29 Aligned_cols=33 Identities=21% Similarity=0.341 Sum_probs=22.9
Q ss_pred cccccccccC-cCCCCChhhHHHHHHHHHcCCceEEe
Q 014320 108 IDPHTHLAME-FMGSETIDDFFSGQAAALAGGTTMHI 143 (427)
Q Consensus 108 ID~H~H~~~~-~~g~~~~e~~~~~~~~~l~~GvTtv~ 143 (427)
||.|+|...+ ..|..+.+++ .+.|.+.|++++.
T Consensus 1 iDlH~HT~~s~~dg~~~~~e~---v~~A~~~Gl~~i~ 34 (175)
T PF02811_consen 1 IDLHVHTKYSILDGKDSPEEY---VEQAKEKGLDAIA 34 (175)
T ss_dssp EEEEB--TTTSSTSSSSHHHH---HHHHHHTTESEEE
T ss_pred CCccccccCcchhhcCCHHHH---HHHHHHcCCCEEE
Confidence 7999998766 3455566665 6788889999876
No 235
>COG0320 LipA Lipoate synthase [Coenzyme metabolism]
Probab=51.61 E-value=75 Score=29.36 Aligned_cols=76 Identities=13% Similarity=0.147 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEE--EEecCC-----CccCCHHHHHHHHHHHH
Q 014320 153 LTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKF--FMAYKG-----SFMINDELLIEGFKRCK 225 (427)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~--~~~~~~-----~~~~~~~~l~~~~~~a~ 225 (427)
....++..++..+..+..-++..+.....+|..+.|+++. ..|++.+.+ |+-|+. .-.++++++...-+.|.
T Consensus 199 SL~~L~~~k~~~P~i~TKSgiMlGLGEt~~Ev~e~m~DLr-~~gvdilTiGQYlqPS~~HlpV~ryv~PeeF~~~~~~a~ 277 (306)
T COG0320 199 SLSLLERAKELGPDIPTKSGLMVGLGETDEEVIEVMDDLR-SAGVDILTIGQYLQPSRKHLPVQRYVTPEEFDELEEVAE 277 (306)
T ss_pred HHHHHHHHHHhCCCcccccceeeecCCcHHHHHHHHHHHH-HcCCCEEEeccccCCccccCCceeccCHHHHHHHHHHHH
Confidence 4455666666665555566666677677788888888887 788886544 444321 12458899999988888
Q ss_pred HcCC
Q 014320 226 SLGA 229 (427)
Q Consensus 226 ~~g~ 229 (427)
+.|.
T Consensus 278 ~~GF 281 (306)
T COG0320 278 EMGF 281 (306)
T ss_pred Hccc
Confidence 8886
No 236
>TIGR00587 nfo apurinic endonuclease (APN1). All proteins in this family for which functions are known are 5' AP endonculeases that are used in base excision repair and the repair of abasic sites in DNA.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=51.24 E-value=2e+02 Score=26.52 Aligned_cols=83 Identities=19% Similarity=0.178 Sum_probs=51.2
Q ss_pred HHHHHHHHHcCCCeEEEEEecCCC---ccCCHHHHHHHHHHHHHcCCc---EEEecCCh-------hhHHHHHHHHHHcC
Q 014320 186 DEMEVMVKEKGINSFKFFMAYKGS---FMINDELLIEGFKRCKSLGAL---AMVHAENG-------DAVFEGQKRMIELG 252 (427)
Q Consensus 186 ~~~~~l~~~~g~~~ik~~~~~~~~---~~~~~~~l~~~~~~a~~~g~~---v~~H~e~~-------~~~~~~~~~l~~~G 252 (427)
+.++++. +.|.+.+.+|...+.. ...+++...++.+...++++. +.+|+.-. +.++.
T Consensus 15 ~a~~~~~-~~G~~~~qif~~~P~~w~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Hapy~iNlas~~~~~r~--------- 84 (274)
T TIGR00587 15 AAYNRAA-EIGATAFMFFLKSPRWWRRPMLEEEVIDWFKAALETNKNLSQIVLVHAPYLINLASPDEEKEE--------- 84 (274)
T ss_pred HHHHHHH-HhCCCEEEEEecCccccCCCCCCHHHHHHHHHHHHHcCCCCcceeccCCeeeecCCCCHHHHH---------
Confidence 4455555 7899999999875432 224566777777777788775 78885321 11110
Q ss_pred CCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 253 ITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 253 ~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
...+.+.+.++.+...|++..+.|..
T Consensus 85 --------------~sv~~~~~~i~~A~~lga~~vv~H~G 110 (274)
T TIGR00587 85 --------------KSLDVLDEELKRCELLGIMLYNFHPG 110 (274)
T ss_pred --------------HHHHHHHHHHHHHHHcCCCEEEECCC
Confidence 11345566677777777776666664
No 237
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=50.80 E-value=2.1e+02 Score=26.48 Aligned_cols=110 Identities=7% Similarity=-0.074 Sum_probs=58.0
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHhccccceeceeccccC-CChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAKNSCMDYGFHMAITK-WDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ 192 (427)
+..+.+.+....+..+..|+..+.-.+..+.. +.. +.++...+... ..+.+. .+... ...+..+..+..
T Consensus 13 g~iD~~~~~~~i~~l~~~Gv~gi~~~GstGE~~~ls~~Er~~l~~~~~~~~~-~~~~vi--~gv~~~~~~~~i~~a~~a- 88 (281)
T cd00408 13 GEVDLDALRRLVEFLIEAGVDGLVVLGTTGEAPTLTDEERKEVIEAVVEAVA-GRVPVI--AGVGANSTREAIELARHA- 88 (281)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHhC-CCCeEE--EecCCccHHHHHHHHHHH-
Confidence 45667778777888899999998866544322 222 22233333221 112221 12222 223334433333
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHH-HHHHHHHcCCcEEEec
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~a~~~g~~v~~H~ 235 (427)
++.|++.+-+.. +.....+++.+.+ ..+.+...++++.++.
T Consensus 89 ~~~Gad~v~v~p--P~y~~~~~~~~~~~~~~ia~~~~~pi~iYn 130 (281)
T cd00408 89 EEAGADGVLVVP--PYYNKPSQEGIVAHFKAVADASDLPVILYN 130 (281)
T ss_pred HHcCCCEEEECC--CcCCCCCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 378999875532 2222245555554 4555566789998883
No 238
>PRK02227 hypothetical protein; Provisional
Probab=50.35 E-value=2e+02 Score=26.12 Aligned_cols=94 Identities=16% Similarity=0.048 Sum_probs=47.2
Q ss_pred HHHHHcCCceEEecCcCCCCC----cHHHHHHHHHHHhc-cccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEe
Q 014320 131 QAAALAGGTTMHIDFVIPING----SLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMA 205 (427)
Q Consensus 131 ~~~~l~~GvTtv~d~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~ 205 (427)
++.++++|. -++|.-+|... .....+++...... +.++.-.+ +..+.............. ..|++.+|+.+.
T Consensus 13 A~~Al~~Ga-DiIDvK~P~~GaLGA~~p~vir~Iv~~~~~~~pvSAti-GD~p~~p~~~~~aa~~~a-~~GvDyVKvGl~ 89 (238)
T PRK02227 13 ALEALAGGA-DIIDVKNPKEGSLGANFPWVIREIVAAVPGRKPVSATI-GDVPYKPGTISLAALGAA-ATGADYVKVGLY 89 (238)
T ss_pred HHHHHhcCC-CEEEccCCCCCCCCCCCHHHHHHHHHHhCCCCCceeec-cCCCCCchHHHHHHHHHH-hhCCCEEEEcCC
Confidence 667888887 67788766544 33444554444332 22222111 112222333444455555 689999999764
Q ss_pred cCCCccCCHHHHHHHHHHHHHc
Q 014320 206 YKGSFMINDELLIEGFKRCKSL 227 (427)
Q Consensus 206 ~~~~~~~~~~~l~~~~~~a~~~ 227 (427)
......-..+.+..+++..+.+
T Consensus 90 ~~~~~~~~~~~~~~v~~a~~~~ 111 (238)
T PRK02227 90 GGKTAEEAVEVMKAVVRAVKDL 111 (238)
T ss_pred CCCcHHHHHHHHHHHHHhhhhc
Confidence 3221111234455555444443
No 239
>PRK07535 methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase; Validated
Probab=50.08 E-value=2e+02 Score=26.45 Aligned_cols=113 Identities=17% Similarity=0.098 Sum_probs=56.8
Q ss_pred HHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHH-cCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccC
Q 014320 185 SDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS-LGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSR 263 (427)
Q Consensus 185 ~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~ 263 (427)
.+...++. +.|++.+.+..... ..-..+.+..+++..++ .++++.+=..+.+..+.+.+.+. |..-... .
T Consensus 28 ~~~A~~~~-~~GAdiIDVg~~~~--~~eE~~r~~~~v~~l~~~~~~plsIDT~~~~v~eaaL~~~~--G~~iINs----I 98 (261)
T PRK07535 28 QKLALKQA-EAGADYLDVNAGTA--VEEEPETMEWLVETVQEVVDVPLCIDSPNPAAIEAGLKVAK--GPPLINS----V 98 (261)
T ss_pred HHHHHHHH-HCCCCEEEECCCCC--chhHHHHHHHHHHHHHHhCCCCEEEeCCCHHHHHHHHHhCC--CCCEEEe----C
Confidence 34445555 67777776654321 11123446666666654 37777777766666555443322 3210000 0
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCEEEEcCCC------H-----HHHHHHHHHhhcCC
Q 014320 264 PPLLEGEATTRAIRLAEFVNTPLYVVHVMS------M-----DAMEEIAKARKAGQ 308 (427)
Q Consensus 264 p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~------~-----~~~~~i~~~~~~G~ 308 (427)
.. +.....+.+.+++++|+++.+.|... . .-.+.+..+.+.|+
T Consensus 99 s~--~~~~~~~~~~l~~~~g~~vv~m~~~~~g~P~t~~~~~~~l~~~v~~a~~~GI 152 (261)
T PRK07535 99 SA--EGEKLEVVLPLVKKYNAPVVALTMDDTGIPKDAEDRLAVAKELVEKADEYGI 152 (261)
T ss_pred CC--CCccCHHHHHHHHHhCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 00 00112344566777888887777631 1 11234555677786
No 240
>TIGR01182 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) is an enzyme of the Entner-Doudoroff pathway. This aldolase has another function, 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) shown experimentally in Escherichia coli and Pseudomonas putida
Probab=49.93 E-value=1.8e+02 Score=25.76 Aligned_cols=98 Identities=12% Similarity=0.135 Sum_probs=59.1
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHcCCCeEE
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFK 201 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik 201 (427)
.+.++.....+++..+|++.+.-.... ....+.++..++..++ +.++. +. -.+ .++.++.. ..|++.+
T Consensus 17 ~~~e~a~~~~~al~~~Gi~~iEit~~t--~~a~~~i~~l~~~~~~--~~vGA--GT-Vl~---~~~a~~a~-~aGA~Fi- 84 (204)
T TIGR01182 17 DDVDDALPLAKALIEGGLRVLEVTLRT--PVALDAIRLLRKEVPD--ALIGA--GT-VLN---PEQLRQAV-DAGAQFI- 84 (204)
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCC--ccHHHHHHHHHHHCCC--CEEEE--Ee-CCC---HHHHHHHH-HcCCCEE-
Confidence 356667777888999999987633222 2345566666654432 22222 11 112 34566666 6888766
Q ss_pred EEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhH
Q 014320 202 FFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAV 241 (427)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~ 241 (427)
++|. ++ .++++.|+++|+++.-=+-++.++
T Consensus 85 --vsP~----~~----~~v~~~~~~~~i~~iPG~~TptEi 114 (204)
T TIGR01182 85 --VSPG----LT----PELAKHAQDHGIPIIPGVATPSEI 114 (204)
T ss_pred --ECCC----CC----HHHHHHHHHcCCcEECCCCCHHHH
Confidence 3332 34 367778889999888777776655
No 241
>TIGR00284 dihydropteroate synthase-related protein. This protein has been found so far only in the Archaea, and in particular in those archaea that lack a bacterial-type dihydropteroate synthase. The central region of this protein shows considerable homology to the amino-terminal half of dihydropteroate synthases, while the carboxyl-terminal region shows homology to the small, uncharacterized protein slr0651 of Synechocystis PCC6803.
Probab=49.81 E-value=3e+02 Score=28.10 Aligned_cols=117 Identities=14% Similarity=0.133 Sum_probs=72.5
Q ss_pred hhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc-CCcEEEecCChhhHHHHHHHHHHcCCCCcccccc
Q 014320 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHAENGDAVFEGQKRMIELGITGPEGHAL 261 (427)
Q Consensus 183 ~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~ 261 (427)
+..+...++. +.|++.|-+.+... ....+.+..+++..++. +.++++=..+.+.++.+. +.|..-...
T Consensus 166 ~i~~~A~~~~-~~GADIIDIG~~st---~p~~~~v~~~V~~l~~~~~~pISIDT~~~~v~eaAL----~aGAdiINs--- 234 (499)
T TIGR00284 166 GIEGLAARME-RDGADMVALGTGSF---DDDPDVVKEKVKTALDALDSPVIADTPTLDELYEAL----KAGASGVIM--- 234 (499)
T ss_pred HHHHHHHHHH-HCCCCEEEECCCcC---CCcHHHHHHHHHHHHhhCCCcEEEeCCCHHHHHHHH----HcCCCEEEE---
Confidence 3445555555 78999987765432 12455688888888876 899999887777665443 334321111
Q ss_pred cCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCC----HHHHHHHHHHhhcCC-CEEEecC
Q 014320 262 SRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS----MDAMEEIAKARKAGQ-RVIGEPV 315 (427)
Q Consensus 262 ~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~----~~~~~~i~~~~~~G~-~v~~~~~ 315 (427)
... ....+.+.++...|+++.+.|... ..-.+.++.+++.|+ ++..++.
T Consensus 235 -Vs~----~~~d~~~~l~a~~g~~vVlm~~~~~~~~~~l~~~ie~a~~~Gi~~IIlDPg 288 (499)
T TIGR00284 235 -PDV----ENAVELASEKKLPEDAFVVVPGNQPTNYEELAKAVKKLRTSGYSKVAADPS 288 (499)
T ss_pred -CCc----cchhHHHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHHHCCCCcEEEeCC
Confidence 100 112345566777889988989653 222356777888998 6666554
No 242
>PRK09195 gatY tagatose-bisphosphate aldolase; Reviewed
Probab=49.59 E-value=2.3e+02 Score=26.57 Aligned_cols=103 Identities=7% Similarity=-0.060 Sum_probs=59.1
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHH-HHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccc
Q 014320 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (427)
Q Consensus 181 ~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~ 259 (427)
+-+..+.+-+..++.+...|-- +.+........+.+.. +...|++...||.+|.......+. +.+..+.|+.+.=.-
T Consensus 27 n~e~~~avi~AAee~~sPvIiq-~~~~~~~~~g~~~~~~~~~~~A~~~~VPV~lHLDHg~~~e~-i~~Ai~~GftSVM~D 104 (284)
T PRK09195 27 NLETMQVVVETAAELHSPVIIA-GTPGTFSYAGTEYLLAIVSAAAKQYHHPLALHLDHHEKFDD-IAQKVRSGVRSVMID 104 (284)
T ss_pred CHHHHHHHHHHHHHhCCCEEEE-cChhHHhhCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHH-HHHHHHcCCCEEEeC
Confidence 3444555555554455544321 2221112234444444 555778899999999854444433 355567788654322
Q ss_pred cccCCHHHHHHHHHHHHHHHHhcCCC
Q 014320 260 ALSRPPLLEGEATTRAIRLAEFVNTP 285 (427)
Q Consensus 260 ~~~~p~~~e~~a~~~~~~~~~~~g~~ 285 (427)
.-..|-.-.....++..+++...|+.
T Consensus 105 gS~l~~eeNi~~T~~vv~~Ah~~gv~ 130 (284)
T PRK09195 105 GSHLPFAQNISLVKEVVDFCHRFDVS 130 (284)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCE
Confidence 33466666677778889999888754
No 243
>COG1060 ThiH Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes [Coenzyme metabolism / General function prediction only]
Probab=49.43 E-value=2.6e+02 Score=27.28 Aligned_cols=116 Identities=15% Similarity=0.096 Sum_probs=67.9
Q ss_pred CCChhhHHHHHHHHHcCCceEEecCcCCCCC----cHHHHHHHHHHHhccccceeceecc-------ccC-CChhhHHHH
Q 014320 121 SETIDDFFSGQAAALAGGTTMHIDFVIPING----SLTAGFEAYEKKAKNSCMDYGFHMA-------ITK-WDEVVSDEM 188 (427)
Q Consensus 121 ~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~~~ 188 (427)
.++++++....+.+...|+|.++=.++..+. ...+.++..++..+ ++..+.- ... ......+.+
T Consensus 89 ~Ls~eeI~~~~~~~~~~G~~Evli~gG~~p~~~~~y~~~~~~~ik~~~p----~~~i~a~s~~ei~~~~~~~~~s~~E~l 164 (370)
T COG1060 89 TLSPEEILEEVREAVKRGITEVLIVGGEHPELSLEYYEELFRTIKEEFP----DLHIHALSAGEILFLAREGGLSYEEVL 164 (370)
T ss_pred ccCHHHHHHHHHHHHHcCCeEEEEecCcCCCcchHHHHHHHHHHHHhCc----chhhcccCHHHhHHHHhccCCCHHHHH
Confidence 3578888888889999999999855443333 22334444443222 2111110 000 011112235
Q ss_pred HHHHHHcCCCeEEEEEe---------cCCCccCCHHHHHHHHHHHHHcCCcE-----EEecCChhhH
Q 014320 189 EVMVKEKGINSFKFFMA---------YKGSFMINDELLIEGFKRCKSLGALA-----MVHAENGDAV 241 (427)
Q Consensus 189 ~~l~~~~g~~~ik~~~~---------~~~~~~~~~~~l~~~~~~a~~~g~~v-----~~H~e~~~~~ 241 (427)
+++. +.|.+.+-.+.+ .+.++..+.+...++.+.|++.|++. ..|.|+.+..
T Consensus 165 ~~Lk-~aGldsmpg~~aeil~e~vr~~~~p~K~~~~~wle~~~~Ah~lGI~~tatml~Gh~E~~ed~ 230 (370)
T COG1060 165 KRLK-EAGLDSMPGGGAEILSEEVRKIHCPPKKSPEEWLEIHERAHRLGIPTTATMLLGHVETREDR 230 (370)
T ss_pred HHHH-HcCCCcCcCcceeechHHHHHhhCCCCCCHHHHHHHHHHHHHcCCCccceeEEEecCCHHHH
Confidence 5555 677766533322 13466788999999999999999754 5688886544
No 244
>PF01261 AP_endonuc_2: Xylose isomerase-like TIM barrel; InterPro: IPR012307 This TIM alpha/beta barrel structure is found in xylose isomerase (P19148 from SWISSPROT) and in endonuclease IV (P12638 from SWISSPROT, 3.1.21.2 from EC). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae []. ; PDB: 3KWS_B 3DX5_A 3CQH_B 3CQI_A 3CQK_A 3CQJ_B 2G0W_B 1DXI_A 2ZDS_D 3TVA_B ....
Probab=49.24 E-value=38 Score=29.39 Aligned_cols=112 Identities=19% Similarity=0.068 Sum_probs=63.7
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEe-cC-ChhhHHHHHHHHHHcCCCCcccccccCC-HHHHHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH-AE-NGDAVFEGQKRMIELGITGPEGHALSRP-PLLEGE 270 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H-~e-~~~~~~~~~~~l~~~G~~~~~~~~~~~p-~~~e~~ 270 (427)
+.|.+.+.+............+.+.++.+.++++|+.+..+ .. ..... ........+ ......
T Consensus 6 ~~G~~~vE~~~~~~~~~~~~~~~~~~~~~~~~~~gl~i~~~~~~~~~~~~--------------~~~~~~~~~~r~~~~~ 71 (213)
T PF01261_consen 6 EAGFDGVELRFDDGQPWDEKDDEAEELRRLLEDYGLKIASLHPPTNFWSP--------------DEENGSANDEREEALE 71 (213)
T ss_dssp HTTHSEEEEEHHHHSHHTHHHHHHHHHHHHHHHTTCEEEEEEEEESSSCT--------------GTTSTTSSSHHHHHHH
T ss_pred HcCCCEEEEecCCCcccccchHHHHHHHHHHHHcCCeEEEEecccccccc--------------cccccCcchhhHHHHH
Confidence 67888887766543111111457888999999999986554 21 11000 000000000 111245
Q ss_pred HHHHHHHHHHhcCCCEEEEcCC---C-----H--------HH-HHHHHHHhhcCCCEEEecCccce
Q 014320 271 ATTRAIRLAEFVNTPLYVVHVM---S-----M--------DA-MEEIAKARKAGQRVIGEPVVSGL 319 (427)
Q Consensus 271 a~~~~~~~~~~~g~~~~i~H~~---~-----~--------~~-~~~i~~~~~~G~~v~~~~~p~~l 319 (427)
.+.+.+++++..|++....|.. . . +. -++.+.+++.|+.+..++.+...
T Consensus 72 ~~~~~i~~a~~lg~~~i~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~ 137 (213)
T PF01261_consen 72 YLKKAIDLAKRLGAKYIVVHSGRYPSGPEDDTEENWERLAENLRELAEIAEEYGVRIALENHPGPF 137 (213)
T ss_dssp HHHHHHHHHHHHTBSEEEEECTTESSSTTSSHHHHHHHHHHHHHHHHHHHHHHTSEEEEE-SSSSS
T ss_pred HHHHHHHHHHHhCCCceeecCcccccccCCCHHHHHHHHHHHHHHHHhhhhhhcceEEEecccCcc
Confidence 6678888999999998888865 1 0 11 12344556779989888887543
No 245
>PRK07084 fructose-bisphosphate aldolase; Provisional
Probab=49.02 E-value=1.9e+02 Score=27.62 Aligned_cols=105 Identities=19% Similarity=0.095 Sum_probs=0.0
Q ss_pred HHHHHHHHcCCceEEe-cCcCCCCCcHHHHHHHHHHHhccccceeceeccccCCChhh----------HHHHHHHHHHcC
Q 014320 128 FSGQAAALAGGTTMHI-DFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVV----------SDEMEVMVKEKG 196 (427)
Q Consensus 128 ~~~~~~~l~~GvTtv~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~l~~~~g 196 (427)
....+.++..|+|+++ |....+.....+.-++..+......+.+-.-.+.....++. .++..+++++-|
T Consensus 98 ~e~i~~ai~~GftSVMiD~S~lp~eeNI~~T~evv~~Ah~~GvsVEaElG~igg~ed~~~~~~~~~T~peeA~~Fv~~Tg 177 (321)
T PRK07084 98 FELCKDCIDSGFSSVMIDGSHLPYEENVALTKKVVEYAHQFDVTVEGELGVLAGVEDEVSAEHHTYTQPEEVEDFVKKTG 177 (321)
T ss_pred HHHHHHHHHcCCCEEEeeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEEeeecCccCCccCcccccCCHHHHHHHHHHhC
Q ss_pred CCeEEEEEe-----cCC-----CccCCHHHHHHHHHHHHHcCCcEEEe
Q 014320 197 INSFKFFMA-----YKG-----SFMINDELLIEGFKRCKSLGALAMVH 234 (427)
Q Consensus 197 ~~~ik~~~~-----~~~-----~~~~~~~~l~~~~~~a~~~g~~v~~H 234 (427)
++.+-+.++ |.+ .+.++.+.|+++-+... ++|+..|
T Consensus 178 vD~LAvaiGt~HG~Y~~~~~~~~p~Ld~d~L~~I~~~~~--~vPLVLH 223 (321)
T PRK07084 178 VDSLAISIGTSHGAYKFKPGQCPPPLRFDILEEIEKRIP--GFPIVLH 223 (321)
T ss_pred CCEEeeccccccccccCCCCCCCCccCHHHHHHHHHhcC--CCCEEEe
No 246
>PF01261 AP_endonuc_2: Xylose isomerase-like TIM barrel; InterPro: IPR012307 This TIM alpha/beta barrel structure is found in xylose isomerase (P19148 from SWISSPROT) and in endonuclease IV (P12638 from SWISSPROT, 3.1.21.2 from EC). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae []. ; PDB: 3KWS_B 3DX5_A 3CQH_B 3CQI_A 3CQK_A 3CQJ_B 2G0W_B 1DXI_A 2ZDS_D 3TVA_B ....
Probab=48.20 E-value=1.8e+02 Score=24.98 Aligned_cols=90 Identities=19% Similarity=0.176 Sum_probs=51.5
Q ss_pred hHHHHHHHHHHcCCCeEEEEEecCCCc------cCC------HHHHHHHHHHHHHcCCcE-EEecC---C--hhhHHHHH
Q 014320 184 VSDEMEVMVKEKGINSFKFFMAYKGSF------MIN------DELLIEGFKRCKSLGALA-MVHAE---N--GDAVFEGQ 245 (427)
Q Consensus 184 ~~~~~~~l~~~~g~~~ik~~~~~~~~~------~~~------~~~l~~~~~~a~~~g~~v-~~H~e---~--~~~~~~~~ 245 (427)
..++++++.++.|+....+........ ... .+.+++.++.|++.|... .+|.- . ........
T Consensus 28 ~~~~~~~~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~a~~lg~~~i~~~~g~~~~~~~~~~~~~~ 107 (213)
T PF01261_consen 28 EAEELRRLLEDYGLKIASLHPPTNFWSPDEENGSANDEREEALEYLKKAIDLAKRLGAKYIVVHSGRYPSGPEDDTEENW 107 (213)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEESSSCTGTTSTTSSSHHHHHHHHHHHHHHHHHHHTBSEEEEECTTESSSTTSSHHHHH
T ss_pred HHHHHHHHHHHcCCeEEEEecccccccccccccCcchhhHHHHHHHHHHHHHHHHhCCCceeecCcccccccCCCHHHHH
Confidence 456677777677776433322221111 112 678899999999999765 44533 1 11111111
Q ss_pred HHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCC
Q 014320 246 KRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS 293 (427)
Q Consensus 246 ~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~ 293 (427)
+.+ .+.+.+..+.+++.|+.+.+.....
T Consensus 108 ~~~--------------------~~~l~~l~~~a~~~gv~i~lE~~~~ 135 (213)
T PF01261_consen 108 ERL--------------------AENLRELAEIAEEYGVRIALENHPG 135 (213)
T ss_dssp HHH--------------------HHHHHHHHHHHHHHTSEEEEE-SSS
T ss_pred HHH--------------------HHHHHHHHhhhhhhcceEEEecccC
Confidence 111 3556777888888898887776643
No 247
>PRK12737 gatY tagatose-bisphosphate aldolase; Reviewed
Probab=48.08 E-value=2.4e+02 Score=26.41 Aligned_cols=130 Identities=5% Similarity=-0.050 Sum_probs=73.0
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHH-HHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccc
Q 014320 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (427)
Q Consensus 181 ~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~ 259 (427)
+.+..+.+-+..++.+...|- .+.+........+.+.. +...|++...||.+|.......+. +.+..+.|+.+.=.-
T Consensus 27 n~e~~~avi~AAee~~sPvIi-q~~~~~~~~~g~~~~~~~~~~~a~~~~VPValHLDH~~~~e~-i~~ai~~GftSVMiD 104 (284)
T PRK12737 27 NLETLQVVVETAAELRSPVIL-AGTPGTFSYAGTDYIVAIAEVAARKYNIPLALHLDHHEDLDD-IKKKVRAGIRSVMID 104 (284)
T ss_pred CHHHHHHHHHHHHHhCCCEEE-EcCccHHhhCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHH-HHHHHHcCCCeEEec
Confidence 344555555555455554432 12222112234455555 556778889999999854433332 345567787654322
Q ss_pred cccCCHHHHHHHHHHHHHHHHhcCCCE--EEEcCC--------------CHHHHHHHHHHhhcCCCEEE
Q 014320 260 ALSRPPLLEGEATTRAIRLAEFVNTPL--YVVHVM--------------SMDAMEEIAKARKAGQRVIG 312 (427)
Q Consensus 260 ~~~~p~~~e~~a~~~~~~~~~~~g~~~--~i~H~~--------------~~~~~~~i~~~~~~G~~v~~ 312 (427)
.-..|-.-.....++..+++...|+.+ -+.|+. ..++.+..++.++.|+...+
T Consensus 105 gS~lp~eeNi~~T~~vv~~Ah~~gvsVEaElG~igg~e~~~~~~~~~~~~T~peeA~~Fv~~TgvD~LA 173 (284)
T PRK12737 105 GSHLSFEENIAIVKEVVEFCHRYDASVEAELGRLGGQEDDLVVDEKDAMYTNPDAAAEFVERTGIDSLA 173 (284)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCccCCcccccccccCCCHHHHHHHHHHhCCCEEe
Confidence 334666666777788999998887653 233332 11223455666677887544
No 248
>TIGR01429 AMP_deaminase AMP deaminase. This model describes AMP deaminase, a large, well-conserved eukaryotic protein involved in energy metabolism. Most members of the family have an additional, poorly alignable region of 150 amino acids or more N-terminal to the region included in the model.
Probab=47.79 E-value=2.4e+02 Score=29.58 Aligned_cols=17 Identities=29% Similarity=0.345 Sum_probs=15.5
Q ss_pred HHHHHhcCCceEEecCC
Q 014320 352 LQAALATGILQLVGTDH 368 (427)
Q Consensus 352 l~~~l~~G~~~~lgSD~ 368 (427)
+.++++.|+.++|+||.
T Consensus 506 ~~~~~~~Gl~VSLsTDD 522 (611)
T TIGR01429 506 LPEYLHKGLNVSLSTDD 522 (611)
T ss_pred HHHHHHCCCeEEEcCCC
Confidence 67799999999999996
No 249
>PF01081 Aldolase: KDPG and KHG aldolase; InterPro: IPR000887 4-Hydroxy-2-oxoglutarate aldolase (4.1.3.16 from EC) (KHG-aldolase) catalyzes the interconversion of 4-hydroxy-2-oxoglutarate into pyruvate and glyoxylate. Phospho-2-dehydro-3-deoxygluconate aldolase (4.1.2.14 from EC) (KDPG-aldolase) catalyzes the interconversion of 6-phospho-2-dehydro-3-deoxy-D-gluconate into pyruvate and glyceraldehyde 3-phosphate. These two enzymes are structurally and functionally related []. They are both homotrimeric proteins of approximately 220 amino-acid residues. They are class I aldolases whose catalytic mechanism involves the formation of a Schiff-base intermediate between the substrate and the epsilon-amino group of a lysine residue. In both enzymes, an arginine is required for catalytic activity.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VCR_A 1FQ0_A 1EUN_A 1EUA_B 1FWR_A 2C0A_B 1WBH_A 1WAU_A 2YW3_B 2YW4_A ....
Probab=47.45 E-value=2e+02 Score=25.28 Aligned_cols=99 Identities=12% Similarity=0.116 Sum_probs=56.9
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHcCCCeEE
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFK 201 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik 201 (427)
.+.++.....++.+.+|+..+--.... ....+.++..++..++..+..+ . -.+ .++.++.. +.|+..+
T Consensus 17 ~~~~~a~~~~~al~~gGi~~iEiT~~t--~~a~~~I~~l~~~~p~~~vGAG----T-V~~---~e~a~~a~-~aGA~Fi- 84 (196)
T PF01081_consen 17 DDPEDAVPIAEALIEGGIRAIEITLRT--PNALEAIEALRKEFPDLLVGAG----T-VLT---AEQAEAAI-AAGAQFI- 84 (196)
T ss_dssp SSGGGHHHHHHHHHHTT--EEEEETTS--TTHHHHHHHHHHHHTTSEEEEE----S---S---HHHHHHHH-HHT-SEE-
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCC--ccHHHHHHHHHHHCCCCeeEEE----e-ccC---HHHHHHHH-HcCCCEE-
Confidence 356677777888999999987643222 2455666666655444322221 1 112 33456666 6788765
Q ss_pred EEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHH
Q 014320 202 FFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVF 242 (427)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~ 242 (427)
++|. ++ .++++.|+++++++.-=+-++.++.
T Consensus 85 --vSP~----~~----~~v~~~~~~~~i~~iPG~~TptEi~ 115 (196)
T PF01081_consen 85 --VSPG----FD----PEVIEYAREYGIPYIPGVMTPTEIM 115 (196)
T ss_dssp --EESS----------HHHHHHHHHHTSEEEEEESSHHHHH
T ss_pred --ECCC----CC----HHHHHHHHHcCCcccCCcCCHHHHH
Confidence 2332 34 4667788899999888888877663
No 250
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=46.70 E-value=2.6e+02 Score=26.37 Aligned_cols=109 Identities=11% Similarity=-0.095 Sum_probs=59.0
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHHH---HHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 192 (427)
|..+.+.+....+..+..||..+.-.+..+.. +..+ .++...+.. .+..+-.+. + ....+.++..+...
T Consensus 23 g~iD~~~l~~li~~l~~~Gv~Gi~~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~gv--~--~~t~~~i~~~~~a~ 98 (303)
T PRK03620 23 GSFDEAAYREHLEWLAPYGAAALFAAGGTGEFFSLTPDEYSQVVRAAVETTAGRVPVIAGA--G--GGTAQAIEYAQAAE 98 (303)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEEec--C--CCHHHHHHHHHHHH
Confidence 45667777777888899999999866543322 2222 223222222 222222222 2 23344555445444
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHHH-HHHHHHcCCcEEEec
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIEG-FKRCKSLGALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~-~~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+. .|. ....+++.+..- .+.+...++++.+..
T Consensus 99 -~~Gadav~~~-pP~-y~~~~~~~i~~~f~~va~~~~lpi~lYn 139 (303)
T PRK03620 99 -RAGADGILLL-PPY-LTEAPQEGLAAHVEAVCKSTDLGVIVYN 139 (303)
T ss_pred -HhCCCEEEEC-CCC-CCCCCHHHHHHHHHHHHHhCCCCEEEEc
Confidence 7899987442 222 223456655554 444566789988864
No 251
>PRK00912 ribonuclease P protein component 3; Provisional
Probab=45.73 E-value=36 Score=30.75 Aligned_cols=53 Identities=9% Similarity=0.053 Sum_probs=34.5
Q ss_pred HHHHHhcCCceEEecC-CCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 352 LQAALATGILQLVGTD-HCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 352 l~~~l~~G~~~~lgSD-~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
++..-+.|++++++|| |.|... . +.+... .+.+..+++.+++++..+.+|.++
T Consensus 160 ~~~~~~~g~piiisSdAh~~~~l--~---------------~~~~~~-----~l~~~~Gl~~~~~~~~~~~~~~~i 213 (237)
T PRK00912 160 LALARKYDFPLVLTSGAMSCYDL--R---------------SPREMI-----ALAELFGMEEDEALKALSYYPESI 213 (237)
T ss_pred HHHHHhcCCCEEEeCCCCccccc--C---------------CHHHHH-----HHHHHcCCCHHHHHHHHHHhHHHH
Confidence 3444456999999999 444321 1 111111 234467899999999999998765
No 252
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=45.49 E-value=2.6e+02 Score=26.16 Aligned_cols=109 Identities=12% Similarity=-0.060 Sum_probs=58.1
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 192 (427)
|..+.+.+....+..+..||..+.-.+..+.. +.. +.++...+.. .+..+-.+. + ...++.++..+...
T Consensus 21 g~iD~~~l~~li~~l~~~Gv~gi~v~GstGE~~~Lt~eEr~~v~~~~~~~~~g~~pvi~gv--~--~~t~~ai~~a~~a~ 96 (296)
T TIGR03249 21 GSFDEAAYRENIEWLLGYGLEALFAAGGTGEFFSLTPAEYEQVVEIAVSTAKGKVPVYTGV--G--GNTSDAIEIARLAE 96 (296)
T ss_pred CCcCHHHHHHHHHHHHhcCCCEEEECCCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEEec--C--ccHHHHHHHHHHHH
Confidence 45677778777888899999999866543322 222 2223222222 222222222 2 22445555444443
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHH-HHHHHHHcCCcEEEec
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+. .|. ....+++.+.+ ..+.+...++++.+..
T Consensus 97 -~~Gadav~~~-pP~-y~~~s~~~i~~~f~~v~~a~~~pvilYn 137 (296)
T TIGR03249 97 -KAGADGYLLL-PPY-LINGEQEGLYAHVEAVCESTDLGVIVYQ 137 (296)
T ss_pred -HhCCCEEEEC-CCC-CCCCCHHHHHHHHHHHHhccCCCEEEEe
Confidence 7899987442 222 22245565554 4444555678887763
No 253
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=44.95 E-value=71 Score=26.03 Aligned_cols=48 Identities=21% Similarity=0.212 Sum_probs=32.9
Q ss_pred HHHHHHHcCCCeEEEEEec------------CCCccCCHHHHHHHHHHHHHcCCcEEEec
Q 014320 188 MEVMVKEKGINSFKFFMAY------------KGSFMINDELLIEGFKRCKSLGALAMVHA 235 (427)
Q Consensus 188 ~~~l~~~~g~~~ik~~~~~------------~~~~~~~~~~l~~~~~~a~~~g~~v~~H~ 235 (427)
+.+.++..+++++-++... .-.+.+..+.|.+++++|++.|+.+.+..
T Consensus 5 ~~~~lk~~~v~si~i~a~~h~g~ayYPt~~~~~hp~L~~Dllge~v~a~h~~Girv~ay~ 64 (132)
T PF14871_consen 5 FVDTLKEAHVNSITIFAKCHGGYAYYPTKVGPRHPGLKRDLLGEQVEACHERGIRVPAYF 64 (132)
T ss_pred HHHHHHHhCCCEEEEEcccccEEEEccCCCCcCCCCCCcCHHHHHHHHHHHCCCEEEEEE
Confidence 3444446677776665431 11234567899999999999999998874
No 254
>PRK12738 kbaY tagatose-bisphosphate aldolase; Reviewed
Probab=44.84 E-value=2.7e+02 Score=26.10 Aligned_cols=130 Identities=8% Similarity=-0.021 Sum_probs=71.7
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHH-HHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccc
Q 014320 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (427)
Q Consensus 181 ~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~ 259 (427)
+.+..+.+-+..++.+...|-- +++........+.+.. +...|++.++||.+|.......+.+ .+..+.|+.+.=.-
T Consensus 27 n~e~~~avi~AAee~~sPvIlq-~s~~~~~~~~~~~~~~~~~~~a~~~~VPValHLDHg~~~e~i-~~ai~~GFtSVM~D 104 (286)
T PRK12738 27 NAETIQAILEVCSEMRSPVILA-GTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHESLDDI-RRKVHAGVRSAMID 104 (286)
T ss_pred CHHHHHHHHHHHHHHCCCEEEE-cCcchhhhCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHH-HHHHHcCCCeEeec
Confidence 4455555555554555554421 2221111234444443 4556788899999998555444433 34557788654322
Q ss_pred cccCCHHHHHHHHHHHHHHHHhcCCCE--EEEcCCC--------------HHHHHHHHHHhhcCCCEEE
Q 014320 260 ALSRPPLLEGEATTRAIRLAEFVNTPL--YVVHVMS--------------MDAMEEIAKARKAGQRVIG 312 (427)
Q Consensus 260 ~~~~p~~~e~~a~~~~~~~~~~~g~~~--~i~H~~~--------------~~~~~~i~~~~~~G~~v~~ 312 (427)
.-..|-.-.....++..+++...|+.+ -+.|+.. .++.+..++.++.|+...+
T Consensus 105 gS~lp~eeNi~~T~evv~~Ah~~gv~VEaElG~igg~ed~~~~~~~~~~~T~peea~~Fv~~TgvD~LA 173 (286)
T PRK12738 105 GSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTGVDSLA 173 (286)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEeeCCccCCcccccchhcCCCHHHHHHHHHHhCCCEEE
Confidence 334666666777788888888877642 2333311 1233445556677887544
No 255
>PF00834 Ribul_P_3_epim: Ribulose-phosphate 3 epimerase family; InterPro: IPR000056 Ribulose-phosphate 3-epimerase (5.1.3.1 from EC) (also known as pentose-5-phosphate 3-epimerase or PPE) is the enzyme that converts D-ribulose 5-phosphate into D-xylulose 5-phosphate in Calvin's reductive pentose phosphate cycle. In Ralstonia eutropha (Alcaligenes eutrophus) two copies of the gene coding for PPE are known [], one is chromosomally encoded P40117 from SWISSPROT, the other one is on a plasmid Q04539 from SWISSPROT. PPE has been found in a wide range of bacteria, archaebacteria, fungi and plants. All the proteins have from 209 to 241 amino acid residues. The enzyme has a TIM barrel structure.; GO: 0004750 ribulose-phosphate 3-epimerase activity, 0005975 carbohydrate metabolic process; PDB: 3CTL_A 3CT7_D 3CU2_A 1RPX_A 3OVR_A 3OVP_A 3OVQ_B 3QC3_B 3INP_A 1TQJ_D ....
Probab=44.81 E-value=2.2e+02 Score=25.07 Aligned_cols=96 Identities=16% Similarity=0.081 Sum_probs=53.4
Q ss_pred HHHHHHHHHHcCCCeEEE-EEecCCCc--cCCHHHHHHHHHHHHHcCCcEEEec--CChhhHHHHHHHHHHcCCCCcccc
Q 014320 185 SDEMEVMVKEKGINSFKF-FMAYKGSF--MINDELLIEGFKRCKSLGALAMVHA--ENGDAVFEGQKRMIELGITGPEGH 259 (427)
Q Consensus 185 ~~~~~~l~~~~g~~~ik~-~~~~~~~~--~~~~~~l~~~~~~a~~~g~~v~~H~--e~~~~~~~~~~~l~~~G~~~~~~~ 259 (427)
.++++++. +.|++.+.+ .|+.+..+ .+.++.++++.+. ..+++.+|. +++... .+.+.
T Consensus 15 ~~~i~~l~-~~g~d~lHiDiMDg~fvpn~~~g~~~i~~i~~~---~~~~~DvHLMv~~P~~~---i~~~~---------- 77 (201)
T PF00834_consen 15 EEEIKRLE-EAGADWLHIDIMDGHFVPNLTFGPDIIKAIRKI---TDLPLDVHLMVENPERY---IEEFA---------- 77 (201)
T ss_dssp HHHHHHHH-HTT-SEEEEEEEBSSSSSSB-B-HHHHHHHHTT---SSSEEEEEEESSSGGGH---HHHHH----------
T ss_pred HHHHHHHH-HcCCCEEEEeecccccCCcccCCHHHHHHHhhc---CCCcEEEEeeeccHHHH---HHHHH----------
Confidence 34555554 788998775 45655443 3457677666443 678999995 444321 12222
Q ss_pred cccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCC-HHHHHHHHHHhhcCCCEEEecCccc
Q 014320 260 ALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS-MDAMEEIAKARKAGQRVIGEPVVSG 318 (427)
Q Consensus 260 ~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~-~~~~~~i~~~~~~G~~v~~~~~p~~ 318 (427)
+.|+.....|... ....+.++..|+.|+.+.....|..
T Consensus 78 ---------------------~~g~~~i~~H~E~~~~~~~~i~~ik~~g~k~GialnP~T 116 (201)
T PF00834_consen 78 ---------------------EAGADYITFHAEATEDPKETIKYIKEAGIKAGIALNPET 116 (201)
T ss_dssp ---------------------HHT-SEEEEEGGGTTTHHHHHHHHHHTTSEEEEEE-TTS
T ss_pred ---------------------hcCCCEEEEcccchhCHHHHHHHHHHhCCCEEEEEECCC
Confidence 2344444555532 2335678888888887766666653
No 256
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=44.24 E-value=2.8e+02 Score=26.18 Aligned_cols=109 Identities=6% Similarity=-0.009 Sum_probs=57.3
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHhccccceeceeccccC-CChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAKNSCMDYGFHMAITK-WDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ 192 (427)
|..+.+.+.......+..||..+.-.+..+.. +.. +.++...+... ..+.+ ..+... ..++.++..+...
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~Gi~v~GstGE~~~Lt~eEr~~v~~~~~~~~~-grvpv--i~Gv~~~~t~~ai~~a~~A~ 100 (309)
T cd00952 24 DTVDLDETARLVERLIAAGVDGILTMGTFGECATLTWEEKQAFVATVVETVA-GRVPV--FVGATTLNTRDTIARTRALL 100 (309)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECcccccchhCCHHHHHHHHHHHHHHhC-CCCCE--EEEeccCCHHHHHHHHHHHH
Confidence 45667777777888899999999876544332 222 22222222221 11211 122222 2344444444443
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHHHHH-HHHHc-CCcEEEe
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIEGFK-RCKSL-GALAMVH 234 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~a~~~-g~~v~~H 234 (427)
+.|++.+-+..-+ ....+++.+.+-++ .++.. ++|+.+.
T Consensus 101 -~~Gad~vlv~~P~--y~~~~~~~l~~yf~~va~a~~~lPv~iY 141 (309)
T cd00952 101 -DLGADGTMLGRPM--WLPLDVDTAVQFYRDVAEAVPEMAIAIY 141 (309)
T ss_pred -HhCCCEEEECCCc--CCCCCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 7899987554321 22235565555444 45556 5898886
No 257
>PRK08091 ribulose-phosphate 3-epimerase; Validated
Probab=43.61 E-value=2.5e+02 Score=25.34 Aligned_cols=45 Identities=11% Similarity=0.072 Sum_probs=27.9
Q ss_pred HHHHHHHHHHcCCCeEEE-EEecCCCc--cCCHHHHHHHHHHHHHcCCcEEEec
Q 014320 185 SDEMEVMVKEKGINSFKF-FMAYKGSF--MINDELLIEGFKRCKSLGALAMVHA 235 (427)
Q Consensus 185 ~~~~~~l~~~~g~~~ik~-~~~~~~~~--~~~~~~l~~~~~~a~~~g~~v~~H~ 235 (427)
.++++++. ..|++.+.+ .|+.+..+ .+.++.++.+. .++++.+|.
T Consensus 28 ~~el~~l~-~~g~d~lHiDVMDG~FVPNitfGp~~i~~i~-----~~~~~DvHL 75 (228)
T PRK08091 28 NETLTTLS-ENQLRLLHFDIADGQFSPFFTVGAIAIKQFP-----THCFKDVHL 75 (228)
T ss_pred HHHHHHHH-HCCCCEEEEeccCCCcCCccccCHHHHHHhC-----CCCCEEEEe
Confidence 34556555 678888765 34444444 34566666663 278999995
No 258
>PRK07998 gatY putative fructose-1,6-bisphosphate aldolase; Reviewed
Probab=43.30 E-value=2.8e+02 Score=25.91 Aligned_cols=130 Identities=11% Similarity=0.126 Sum_probs=72.5
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHH-HHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccc
Q 014320 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLI-EGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (427)
Q Consensus 181 ~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~-~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~ 259 (427)
+-+..+.+-+..++.+...|-- ..+........+.+. -+...|++.++||.+|.......+.+ .+..+.|+.+.=.-
T Consensus 27 n~e~~~avi~AAe~~~sPvIl~-~~~~~~~~~g~~~~~~~~~~~A~~~~vPV~lHLDH~~~~e~i-~~Ai~~GftSVM~D 104 (283)
T PRK07998 27 NLETTISILNAIERSGLPNFIQ-IAPTNAQLSGYDYIYEIVKRHADKMDVPVSLHLDHGKTFEDV-KQAVRAGFTSVMID 104 (283)
T ss_pred CHHHHHHHHHHHHHhCCCEEEE-CcHhHHhhCCHHHHHHHHHHHHHHCCCCEEEECcCCCCHHHH-HHHHHcCCCEEEEe
Confidence 3344444555444445443321 122111223444454 45567788999999998544444333 34457787654322
Q ss_pred cccCCHHHHHHHHHHHHHHHHhcCCCE--EEEcCCC------------HHHHHHHHHHhhcCCCEEE
Q 014320 260 ALSRPPLLEGEATTRAIRLAEFVNTPL--YVVHVMS------------MDAMEEIAKARKAGQRVIG 312 (427)
Q Consensus 260 ~~~~p~~~e~~a~~~~~~~~~~~g~~~--~i~H~~~------------~~~~~~i~~~~~~G~~v~~ 312 (427)
.-..|-.-.....++..+++...|+.+ -+.|+.. .++.+..++.++.|+...+
T Consensus 105 gS~l~~eeNi~~T~~vve~Ah~~gv~VEaElG~vgg~ed~~~~~~~~~T~pe~a~~Fv~~TgvD~LA 171 (283)
T PRK07998 105 GAALPFEENIAFTKEAVDFAKSYGVPVEAELGAILGKEDDHVSEADCKTEPEKVKDFVERTGCDMLA 171 (283)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeccCCCccccccccccccCCHHHHHHHHHHhCcCeee
Confidence 234566666777888999999998765 4455521 1223445566677877554
No 259
>PRK06801 hypothetical protein; Provisional
Probab=43.24 E-value=2.8e+02 Score=25.93 Aligned_cols=104 Identities=12% Similarity=-0.001 Sum_probs=58.1
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHH-HHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccc
Q 014320 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLI-EGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (427)
Q Consensus 181 ~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~-~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~ 259 (427)
+-+....+-+..++.+...|-- +........+.+.+. -+...|++...||.+|.......+. +++..+.|+.+.-.-
T Consensus 27 n~e~~~avi~AAe~~~~PvIl~-~~~~~~~~~~~~~~~~~~~~~a~~~~vpV~lHlDH~~~~e~-i~~Ai~~GftSVm~D 104 (286)
T PRK06801 27 DSHFLRALFAAAKQERSPFIIN-IAEVHFKYISLESLVEAVKFEAARHDIPVVLNLDHGLHFEA-VVRALRLGFSSVMFD 104 (286)
T ss_pred CHHHHHHHHHHHHHHCCCEEEE-eCcchhhcCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHH-HHHHHHhCCcEEEEc
Confidence 4445555555554555554422 222212223544444 4556677889999999855444433 345566787655433
Q ss_pred cccCCHHHHHHHHHHHHHHHHhcCCCE
Q 014320 260 ALSRPPLLEGEATTRAIRLAEFVNTPL 286 (427)
Q Consensus 260 ~~~~p~~~e~~a~~~~~~~~~~~g~~~ 286 (427)
....|..-......+..++++..|+.+
T Consensus 105 ~S~l~~eeNi~~t~~v~~~a~~~gv~V 131 (286)
T PRK06801 105 GSTLEYEENVRQTREVVKMCHAVGVSV 131 (286)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCeE
Confidence 334555545566677777787777654
No 260
>PRK13209 L-xylulose 5-phosphate 3-epimerase; Reviewed
Probab=43.14 E-value=2.7e+02 Score=25.61 Aligned_cols=45 Identities=9% Similarity=-0.003 Sum_probs=30.5
Q ss_pred HHHHHHcCCCeEEEEEecCC----CccCCHHHHHHHHHHHHHcCCcEEE
Q 014320 189 EVMVKEKGINSFKFFMAYKG----SFMINDELLIEGFKRCKSLGALAMV 233 (427)
Q Consensus 189 ~~l~~~~g~~~ik~~~~~~~----~~~~~~~~l~~~~~~a~~~g~~v~~ 233 (427)
-+.+++.|.+++.+...... ....+++.+.++.+.++++|+.+..
T Consensus 27 ~~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gl~i~~ 75 (283)
T PRK13209 27 LAIAKTAGFDFVEMSVDESDERLARLDWSREQRLALVNALVETGFRVNS 75 (283)
T ss_pred HHHHHHcCCCeEEEecCccccchhccCCCHHHHHHHHHHHHHcCCceeE
Confidence 33333789998887653211 1234678888999999999998753
No 261
>TIGR00190 thiC thiamine biosynthesis protein ThiC. The thiC ortholog is designated thiA in Bacillus subtilis.
Probab=42.82 E-value=3.4e+02 Score=26.70 Aligned_cols=20 Identities=15% Similarity=0.140 Sum_probs=16.1
Q ss_pred HHHHHHHcCCceEEecCcCC
Q 014320 129 SGQAAALAGGTTMHIDFVIP 148 (427)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~~~ 148 (427)
.-.+.+++.|.-|++|....
T Consensus 81 ~K~~~A~~~GADtiMDLStG 100 (423)
T TIGR00190 81 EKALIAIKYGADTVMDLSTG 100 (423)
T ss_pred HHHHHHHHcCCCeEeeccCC
Confidence 44778899999999998643
No 262
>COG2876 AroA 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
Probab=42.68 E-value=2.8e+02 Score=25.63 Aligned_cols=70 Identities=14% Similarity=-0.028 Sum_probs=45.6
Q ss_pred ccCCChhhHHHHHHHHHHcCCCeE-----EEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHH
Q 014320 177 ITKWDEVVSDEMEVMVKEKGINSF-----KFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQK 246 (427)
Q Consensus 177 ~~~~~~~~~~~~~~l~~~~g~~~i-----k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~ 246 (427)
..-.+++......+.+++.|++.+ |.-.++........+-+..+.+.++++|+++.+-.-+.+.++...+
T Consensus 53 CsvEs~E~i~~~A~~vk~~Ga~~lRGgafKPRTSPYsFQGlge~gL~~l~~a~~~~Gl~vvtEvm~~~~~e~~~~ 127 (286)
T COG2876 53 CSVESEEQVRETAESVKAAGAKALRGGAFKPRTSPYSFQGLGEEGLKLLKRAADETGLPVVTEVMDVRDVEAAAE 127 (286)
T ss_pred cccCCHHHHHHHHHHHHHcchhhccCCcCCCCCCcccccccCHHHHHHHHHHHHHcCCeeEEEecCHHHHHHHHh
Confidence 333455666666666667776543 3333333344567788888888899999999998877766655543
No 263
>TIGR02109 PQQ_syn_pqqE coenzyme PQQ biosynthesis protein E. This model describes coenzyme PQQ biosynthesis protein E, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ). PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=42.67 E-value=3.2e+02 Score=26.30 Aligned_cols=40 Identities=25% Similarity=0.226 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHhcCCCEEEEcC---CCHH-HHHHHHHHhhcCCC
Q 014320 270 EATTRAIRLAEFVNTPLYVVHV---MSMD-AMEEIAKARKAGQR 309 (427)
Q Consensus 270 ~a~~~~~~~~~~~g~~~~i~H~---~~~~-~~~~i~~~~~~G~~ 309 (427)
+.+.+.+...++.|.++.+.-+ .+.+ -.+.++.+++.|+.
T Consensus 132 ~~v~~~i~~l~~~g~~v~v~~vv~~~N~~~l~~~~~~~~~lg~~ 175 (358)
T TIGR02109 132 EQKLAMARAVKAAGLPLTLNFVIHRHNIDQIPEIIELAIELGAD 175 (358)
T ss_pred HHHHHHHHHHHhCCCceEEEEEeccCCHHHHHHHHHHHHHcCCC
Confidence 3445566666777776544322 2232 23556777788876
No 264
>TIGR01858 tag_bisphos_ald class II aldolase, tagatose bisphosphate family. This model describes tagatose-1,6-bisphosphate aldolases, and perhaps other closely related class II aldolases. This tetrameric, Zn2+-dependent enzyme is related to the class II fructose bisphosphate aldolase; fructose 1,6-bisphosphate and tagatose 1,6 bisphosphate differ only in chirality at C4.
Probab=42.35 E-value=2.9e+02 Score=25.80 Aligned_cols=130 Identities=6% Similarity=-0.007 Sum_probs=70.6
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHH-HHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccc
Q 014320 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (427)
Q Consensus 181 ~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~ 259 (427)
+.+..+.+-+..++.+...|- .+.+........+.+.. +...|++...||.+|.......+. +.+..+.|+.+.=.-
T Consensus 25 n~e~~~avi~AAee~~sPvIl-q~s~~~~~~~~~~~~~~~~~~~a~~~~VPValHLDHg~~~e~-i~~ai~~GFtSVM~D 102 (282)
T TIGR01858 25 NLETIQAVVETAAEMRSPVIL-AGTPGTFKHAGTEYIVALCSAASTTYNMPLALHLDHHESLDD-IRQKVHAGVRSAMID 102 (282)
T ss_pred CHHHHHHHHHHHHHhCCCEEE-EeCccHHhhCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHH-HHHHHHcCCCEEeec
Confidence 344455555555455554432 22222112234444444 445677889999999854433332 355567787654322
Q ss_pred cccCCHHHHHHHHHHHHHHHHhcCCCE--EEEcCCC--------------HHHHHHHHHHhhcCCCEEE
Q 014320 260 ALSRPPLLEGEATTRAIRLAEFVNTPL--YVVHVMS--------------MDAMEEIAKARKAGQRVIG 312 (427)
Q Consensus 260 ~~~~p~~~e~~a~~~~~~~~~~~g~~~--~i~H~~~--------------~~~~~~i~~~~~~G~~v~~ 312 (427)
.-..|-.-.....++..+++...|+.+ -+.|+.. .++.+..++.++.|+...+
T Consensus 103 gS~lp~eeNi~~T~~vv~~Ah~~gv~VEaElG~vgg~e~~~~~~~~~~~~T~peea~~Fv~~TgvD~LA 171 (282)
T TIGR01858 103 GSHFPFAQNVKLVKEVVDFCHRQDCSVEAELGRLGGVEDDLSVDEEDALYTDPQEAKEFVEATGVDSLA 171 (282)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEecCCccCCCccccchhccCCHHHHHHHHHHHCcCEEe
Confidence 334566666777788888888887642 2333311 1223445556677877544
No 265
>PRK08883 ribulose-phosphate 3-epimerase; Provisional
Probab=42.14 E-value=2.5e+02 Score=25.05 Aligned_cols=47 Identities=15% Similarity=0.130 Sum_probs=27.8
Q ss_pred HHHHHHHHHcCCCeEEE-EEecCCCc--cCCHHHHHHHHHHHHHcCCcEEEec
Q 014320 186 DEMEVMVKEKGINSFKF-FMAYKGSF--MINDELLIEGFKRCKSLGALAMVHA 235 (427)
Q Consensus 186 ~~~~~l~~~~g~~~ik~-~~~~~~~~--~~~~~~l~~~~~~a~~~g~~v~~H~ 235 (427)
++++++. +.|++.+.+ .|+.+..+ .+.++.++.+.+. ..++++.+|.
T Consensus 16 ~~i~~l~-~~g~~~lH~DvmDG~Fvpn~tfg~~~i~~i~~~--~~~~~~dvHL 65 (220)
T PRK08883 16 EDVEKVL-AAGADVVHFDVMDNHYVPNLTFGAPICKALRDY--GITAPIDVHL 65 (220)
T ss_pred HHHHHHH-HcCCCEEEEecccCcccCccccCHHHHHHHHHh--CCCCCEEEEe
Confidence 4455554 678887765 34544443 3456666665432 0378999995
No 266
>PRK04208 rbcL ribulose bisophosphate carboxylase; Reviewed
Probab=41.69 E-value=3.2e+02 Score=27.59 Aligned_cols=110 Identities=15% Similarity=0.015 Sum_probs=60.1
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcCCCCC---cHHHHHHHHHHH----hccccceeceeccccCC-ChhhHHHHHHHHH
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKK----AKNSCMDYGFHMAITKW-DEVVSDEMEVMVK 193 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~ 193 (427)
++++.+...+...+.+|+=-+-|-....+. ...+.+....+. ..+.--...+...++.. .++..+..+...
T Consensus 173 Lsp~~~a~~~y~~~~GGvD~IKDDE~l~~q~f~p~~~Rv~~~~~a~~~a~~eTG~~k~y~~NiT~~~~~em~~ra~~~~- 251 (468)
T PRK04208 173 LSAKNYGRVVYEALRGGLDFTKDDENLNSQPFNRWRDRFLFVMEAIDKAEAETGERKGHYLNVTAPTMEEMYKRAEFAK- 251 (468)
T ss_pred CCHHHHHHHHHHHHhcCCceeeCCCCCCCCCCccHHHHHHHHHHHHHHHHHhhCCcceEEEecCCCCHHHHHHHHHHHH-
Confidence 467778788888999999888876433222 333333332222 21111111111222333 344445455554
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
+.|...+-+-.. ......++.+.+.++..+++++.|...
T Consensus 252 e~G~~~~mv~~~-----~~G~~~l~~l~~~~~~~~l~IhaHrA~ 290 (468)
T PRK04208 252 ELGSPIVMIDVV-----TAGWTALQSLREWCRDNGLALHAHRAM 290 (468)
T ss_pred HhCCCEEEEecc-----ccccHHHHHHHHhhhcCCcEEEecCCc
Confidence 677766543221 223445778887777889999999543
No 267
>PF03102 NeuB: NeuB family; InterPro: IPR013132 NeuB is the prokaryotic N-acetylneuraminic acid synthase (Neu5Ac). It catalyses the direct formation of Neu5Ac (the most common sialic acid) by condensation of phosphoenolpyruvate (PEP) and N-acetylmannosamine (ManNAc). This reaction has only been observed in prokaryotes; eukaryotes synthesise the 9-phosphate form, Neu5Ac-9-P, and utilise ManNAc-6-P instead of ManNAc. Such eukaryotic enzymes are not present in this family []. This family also contains SpsE spore coat polysaccharide biosynthesis proteins.; GO: 0016051 carbohydrate biosynthetic process; PDB: 3G8R_B 1XUU_A 1XUZ_A 3CM4_A 2ZDR_A 1VLI_A 2WQP_A.
Probab=41.66 E-value=1e+02 Score=28.01 Aligned_cols=70 Identities=19% Similarity=0.143 Sum_probs=38.9
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcC
Q 014320 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (427)
Q Consensus 212 ~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~ 291 (427)
++.+.+.++.+.|++.|+.+..-+-+.+.++.. ++.|+.-..-... . ..-...++.....|.|+.++=.
T Consensus 53 l~~e~~~~L~~~~~~~gi~f~stpfd~~s~d~l----~~~~~~~~KIaS~---d----l~n~~lL~~~A~tgkPvIlSTG 121 (241)
T PF03102_consen 53 LSEEQHKELFEYCKELGIDFFSTPFDEESVDFL----EELGVPAYKIASG---D----LTNLPLLEYIAKTGKPVILSTG 121 (241)
T ss_dssp S-HHHHHHHHHHHHHTT-EEEEEE-SHHHHHHH----HHHT-SEEEE-GG---G----TT-HHHHHHHHTT-S-EEEE-T
T ss_pred CCHHHHHHHHHHHHHcCCEEEECCCCHHHHHHH----HHcCCCEEEeccc---c----ccCHHHHHHHHHhCCcEEEECC
Confidence 688999999999999999999988887766443 4444422211100 0 0012345566678888766655
Q ss_pred C
Q 014320 292 M 292 (427)
Q Consensus 292 ~ 292 (427)
-
T Consensus 122 ~ 122 (241)
T PF03102_consen 122 M 122 (241)
T ss_dssp T
T ss_pred C
Confidence 3
No 268
>PRK07114 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=41.58 E-value=1.9e+02 Score=25.92 Aligned_cols=100 Identities=15% Similarity=0.055 Sum_probs=55.5
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHh-cc-ccceeceeccccCCChhhHHHHHHHHHHcCCCe
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKA-KN-SCMDYGFHMAITKWDEVVSDEMEVMVKEKGINS 199 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 199 (427)
.+.++....+++.+.+|++.+--....+ ...+.++.+.+.. .+ ..+.++. + +-.+ .++.++.+ ..|+..
T Consensus 24 ~~~~~a~~~~~al~~gGi~~iEiT~~tp--~a~~~i~~l~~~~~~~~p~~~vGa--G-TVl~---~e~a~~a~-~aGA~F 94 (222)
T PRK07114 24 ADVEVAKKVIKACYDGGARVFEFTNRGD--FAHEVFAELVKYAAKELPGMILGV--G-SIVD---AATAALYI-QLGANF 94 (222)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCCC--cHHHHHHHHHHHHHhhCCCeEEee--E-eCcC---HHHHHHHH-HcCCCE
Confidence 3556666677888999999876433222 3444555443221 11 1122222 1 1112 23455555 678765
Q ss_pred EEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhH
Q 014320 200 FKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAV 241 (427)
Q Consensus 200 ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~ 241 (427)
+ ++| .++ .++++.++++|+++.-=+-++.++
T Consensus 95 i---VsP----~~~----~~v~~~~~~~~i~~iPG~~TpsEi 125 (222)
T PRK07114 95 I---VTP----LFN----PDIAKVCNRRKVPYSPGCGSLSEI 125 (222)
T ss_pred E---ECC----CCC----HHHHHHHHHcCCCEeCCCCCHHHH
Confidence 5 232 234 466677888999887777777665
No 269
>COG0191 Fba Fructose/tagatose bisphosphate aldolase [Carbohydrate transport and metabolism]
Probab=41.53 E-value=3e+02 Score=25.71 Aligned_cols=104 Identities=11% Similarity=0.028 Sum_probs=50.3
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEEecCCCccCC-HHHH-HHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCccc
Q 014320 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMIN-DELL-IEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEG 258 (427)
Q Consensus 181 ~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~-~~~l-~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~ 258 (427)
+-+.++.+-+..++.+...|-- .+..+.-..+ .+.+ .-+...++++++||.+|.......+.+ ....+.|+.+.=.
T Consensus 27 nlE~~~AileaA~e~~sPvIiq-~S~g~~~y~gg~~~~~~~v~~~a~~~~vPV~lHlDHg~~~~~~-~~ai~~GFsSvMi 104 (286)
T COG0191 27 NLETLQAILEAAEEEKSPVIIQ-FSEGAAKYAGGADSLAHMVKALAEKYGVPVALHLDHGASFEDC-KQAIRAGFSSVMI 104 (286)
T ss_pred CHHHHHHHHHHHHHhCCCEEEE-ecccHHHHhchHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHH-HHHHhcCCceEEe
Confidence 3455555555554555554422 2222222233 3344 445667788999999998554433333 3334555543211
Q ss_pred ccccCCHHHHHHHHHHHHHHHHhcCCCE
Q 014320 259 HALSRPPLLEGEATTRAIRLAEFVNTPL 286 (427)
Q Consensus 259 ~~~~~p~~~e~~a~~~~~~~~~~~g~~~ 286 (427)
-....|-.-...-.++.++.+...|+.+
T Consensus 105 DgS~~~~eENi~~tkevv~~ah~~gvsV 132 (286)
T COG0191 105 DGSHLPFEENIAITKEVVEFAHAYGVSV 132 (286)
T ss_pred cCCcCCHHHHHHHHHHHHHHHHHcCCcE
Confidence 1112333333344455555555555443
No 270
>TIGR03326 rubisco_III ribulose bisphosphate carboxylase, type III. Members of this protein family are the archaeal, single chain, type III form of ribulose bisphosphate carboxylase, or RuBisCO. Members act is a three-step pathway for conversion of the sugar moiety of AMP to two molecules of 3-phosphoglycerate. Many of these species use ADP-dependent sugar kinases, which form AMP, for glycolysis.
Probab=41.28 E-value=3.4e+02 Score=26.91 Aligned_cols=110 Identities=12% Similarity=-0.007 Sum_probs=59.0
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcCCCCC---cHHHHHHHHHHHh----ccccceeceeccccCCChhhHHHHHHHHHH
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKA----KNSCMDYGFHMAITKWDEVVSDEMEVMVKE 194 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 194 (427)
++++.+...+.....+|+=-+-|-....+. ...+.+....+.. .+.--...+...++...++..+..+... +
T Consensus 157 lsp~~~a~~~~~~~~GGvD~IKDDE~l~~q~~~p~~eRv~~~~~a~~~a~~eTG~~~~ya~NiT~~~~em~~ra~~~~-~ 235 (412)
T TIGR03326 157 LSTEEHAKVAYELWSGGVDLLKDDENLTSQPFNRFEERVEKLYKVRDKVEAETGERKEYLANITAPVREMERRAELVA-D 235 (412)
T ss_pred CChHHHHHHHHHHHhcCCceeecCCCCCCCCCccHHHHHHHHHHHHHHHHHHhCCcceEEEEecCCHHHHHHHHHHHH-H
Confidence 467777777888999999888876433222 3333333332221 1111111111122233344444444444 6
Q ss_pred cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
.|...+-+-.. ......++.+.+.+...+++++.|...
T Consensus 236 ~G~~~~mv~~~-----~~G~~~l~~l~~~~~~~~l~ih~Hra~ 273 (412)
T TIGR03326 236 LGGQYVMVDVV-----VCGWSALQYIRELTEDLGLAIHAHRAM 273 (412)
T ss_pred hCCCeEEEEee-----ccchHHHHHHHHhhccCCeEEEEcCCc
Confidence 77776544322 234456777777777789999999543
No 271
>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional
Probab=41.15 E-value=3.5e+02 Score=26.31 Aligned_cols=42 Identities=21% Similarity=0.195 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHhcCCCEEEEcC---CCHHH-HHHHHHHhhcCCCEE
Q 014320 270 EATTRAIRLAEFVNTPLYVVHV---MSMDA-MEEIAKARKAGQRVI 311 (427)
Q Consensus 270 ~a~~~~~~~~~~~g~~~~i~H~---~~~~~-~~~i~~~~~~G~~v~ 311 (427)
+.+.+.++..++.|.++.+.-+ .+.+. .+.++.+++.|+...
T Consensus 141 ~~~~~~i~~l~~~g~~v~i~~vv~~~N~~~i~~~~~~~~~lgv~~i 186 (378)
T PRK05301 141 AKKLAVARLVKAHGYPLTLNAVIHRHNIDQIPRIIELAVELGADRL 186 (378)
T ss_pred HHHHHHHHHHHHCCCceEEEEEeecCCHHHHHHHHHHHHHcCCCEE
Confidence 3445566777777776554332 23332 355677778888643
No 272
>TIGR00542 hxl6Piso_put hexulose-6-phosphate isomerase, putative. This family is conserved at better than 40 % identity among the four known examples from three species: Escherichia coli (SgbU and SgaU), Haemophilus influenzae, and Mycoplasma pneumoniae. The rarity of the family, high level of conservation, and proposed catabolic role suggests lateral transfer may be a part of the evolutionary history of this protein.
Probab=40.69 E-value=2.9e+02 Score=25.35 Aligned_cols=46 Identities=11% Similarity=0.001 Sum_probs=31.3
Q ss_pred HHHHHHHHcCCCeEEEEEecCC----CccCCHHHHHHHHHHHHHcCCcEE
Q 014320 187 EMEVMVKEKGINSFKFFMAYKG----SFMINDELLIEGFKRCKSLGALAM 232 (427)
Q Consensus 187 ~~~~l~~~~g~~~ik~~~~~~~----~~~~~~~~l~~~~~~a~~~g~~v~ 232 (427)
+.-+++++.|.+++.+.+.... ....+++.+.++.+..+++|+.+.
T Consensus 20 e~l~~~~~~G~~~VEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 69 (279)
T TIGR00542 20 ERLQLAKTCGFDFVEMSVDETDDRLSRLDWSREQRLALVNAIIETGVRIP 69 (279)
T ss_pred HHHHHHHHcCCCEEEEecCCccchhhccCCCHHHHHHHHHHHHHcCCCce
Confidence 3334444789998888665421 123467788888888899998875
No 273
>cd01319 AMPD AMP deaminase (AMPD) catalyzes the hydrolytic deamination of adensosine monophosphate (AMP) at position 6 of the adenine nucleotide ring. AMPD is a diverse and highly regulated eukaryotic key enzyme of the adenylate catabolic pathway.
Probab=40.40 E-value=2e+02 Score=29.36 Aligned_cols=18 Identities=17% Similarity=0.194 Sum_probs=15.7
Q ss_pred HHHHHhcCCceEEecCCC
Q 014320 352 LQAALATGILQLVGTDHC 369 (427)
Q Consensus 352 l~~~l~~G~~~~lgSD~~ 369 (427)
+...++.|+.++|+||..
T Consensus 394 ~~~~l~~Gl~VsInTDDP 411 (496)
T cd01319 394 FPEFFKRGLNVSLSTDDP 411 (496)
T ss_pred HHHHHHCCCeEEEeCCCc
Confidence 667999999999999963
No 274
>COG0800 Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism]
Probab=40.40 E-value=2.2e+02 Score=25.23 Aligned_cols=97 Identities=12% Similarity=0.125 Sum_probs=57.7
Q ss_pred ChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEE
Q 014320 123 TIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKF 202 (427)
Q Consensus 123 ~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~ 202 (427)
+.|.....+++.+.+|++++--....+ .-.+.++...+..++..+..+ +-.+ .++++++. ..|++.+
T Consensus 23 ~~e~a~~~a~Ali~gGi~~IEITl~sp--~a~e~I~~l~~~~p~~lIGAG-----TVL~---~~q~~~a~-~aGa~fi-- 89 (211)
T COG0800 23 DVEEALPLAKALIEGGIPAIEITLRTP--AALEAIRALAKEFPEALIGAG-----TVLN---PEQARQAI-AAGAQFI-- 89 (211)
T ss_pred CHHHHHHHHHHHHHcCCCeEEEecCCC--CHHHHHHHHHHhCcccEEccc-----cccC---HHHHHHHH-HcCCCEE--
Confidence 455555667888999999987433221 345566666555443322221 1122 23566666 6787765
Q ss_pred EEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhH
Q 014320 203 FMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAV 241 (427)
Q Consensus 203 ~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~ 241 (427)
++| .+++ ++++.|.++|+++.-=+.+..++
T Consensus 90 -VsP----~~~~----ev~~~a~~~~ip~~PG~~TptEi 119 (211)
T COG0800 90 -VSP----GLNP----EVAKAANRYGIPYIPGVATPTEI 119 (211)
T ss_pred -ECC----CCCH----HHHHHHHhCCCcccCCCCCHHHH
Confidence 222 2444 56677888999987777777655
No 275
>PF05853 DUF849: Prokaryotic protein of unknown function (DUF849); InterPro: IPR008567 This family consists of several hypothetical prokaryotic proteins with no known function.; PDB: 3C6C_A 2Y7G_B 2Y7F_B 2Y7D_D 2Y7E_B 3LOT_A 3FA5_B 3NO5_C 3E02_A 3E49_B ....
Probab=40.25 E-value=3.1e+02 Score=25.45 Aligned_cols=184 Identities=13% Similarity=0.025 Sum_probs=94.7
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcC-CCCC-------cHHHHHHHHHHHhccccceeceeccccCCC-hhhHHHHHHHH
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVI-PING-------SLTAGFEAYEKKAKNSCMDYGFHMAITKWD-EVVSDEMEVMV 192 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~ 192 (427)
.+++.+...+.++.+.|-+.++-+.. .... ...+.++..++..+...+....... ...+ ++..+.+..+
T Consensus 23 ~tpeEia~~A~~c~~AGAa~vH~H~R~~~~G~~s~d~~~~~e~~~~IR~~~pd~iv~~Ttg~~-~~~~~~~R~~~v~~~- 100 (272)
T PF05853_consen 23 ITPEEIAADAVACYEAGAAIVHIHARDDEDGRPSLDPELYAEVVEAIRAACPDLIVQPTTGGG-GGPDPEERLAHVEAW- 100 (272)
T ss_dssp -SHHHHHHHHHHHHHHTESEEEE-EE-TTTS-EE--HHHHHHHHHHHHHHSTTSEEEEESSTT-TTSGHHHHCTHHHHH-
T ss_pred CCHHHHHHHHHHHHHcCCcEEEeecCCCCCCCcCCCHHHHHHHHHHHHHHCCCeEEEeCCCCC-CCCCHHHHHHHHHhc-
Confidence 46788888888999999998875433 2222 2334444454443333333221111 1111 1112222221
Q ss_pred HHcCCCeEEEEEe------cCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccc---cC
Q 014320 193 KEKGINSFKFFMA------YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHAL---SR 263 (427)
Q Consensus 193 ~~~g~~~ik~~~~------~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~---~~ 263 (427)
..+...+-+. ....+..+.+.++++++.++++|+....=+-+...+... .++.+.|++....+.. ..
T Consensus 101 ---~pd~asl~~gs~n~~~~~~~~~n~~~~~~~~~~~~~e~Gi~pe~ev~d~~~l~~~-~~l~~~G~l~~p~~~~~vlG~ 176 (272)
T PF05853_consen 101 ---KPDMASLNPGSMNFGTRDRVYINTPADARELARRMRERGIKPEIEVFDPGHLRNA-RRLIEKGLLPGPLLVNFVLGV 176 (272)
T ss_dssp -----SEEEEE-S-EEESGGCSEE---HHHHHHHHHHHHHTT-EEEEEESSHHHHHHH-HHHHHTTSS-SSEEEEEEES-
T ss_pred ---CCCeEEecccccccccCCceecCCHHHHHHHHHHHHHcCCeEEEEEEcHHHHHHH-HHHHHCCCCCCCeEEEEcccC
Confidence 2232222111 122334578899999999999999999888887777655 4567779985543322 11
Q ss_pred CH--HHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEe
Q 014320 264 PP--LLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGE 313 (427)
Q Consensus 264 p~--~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~ 313 (427)
+. ......+...+..... +..+.++... ...+..+..+...|..|-+.
T Consensus 177 ~~g~~~~~~~l~~~l~~l~~-~~~w~v~~~g-~~~~~~~~~Ai~~GghvRVG 226 (272)
T PF05853_consen 177 PGGMPATPENLLAMLDMLPE-GAPWSVCGIG-RNQWPLLAAAIAMGGHVRVG 226 (272)
T ss_dssp TTS--S-HHHHHHHHHHHHH-TEEEEEEE-G-GGHHHHHHHHHHTT-EEEES
T ss_pred CCCCCCCHHHHHHHHHhcCC-CCcEEEEccc-hhhHHHHHHHHHcCCceEEe
Confidence 11 1122334444444444 6666555553 44567788888888877653
No 276
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=40.24 E-value=3.1e+02 Score=25.47 Aligned_cols=110 Identities=11% Similarity=-0.038 Sum_probs=57.5
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHhccccceeceeccccC-CChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAKNSCMDYGFHMAITK-WDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ 192 (427)
|..+.+.+.......+..||..+.-.+..+.. +.. +.++...+... ..+.+- .+... ..++.++..+...
T Consensus 14 g~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~Ls~~Er~~~~~~~~~~~~-~~~~vi--~gv~~~s~~~~i~~a~~a~ 90 (285)
T TIGR00674 14 GSVDFAALEKLIDFQIENGTDAIVVVGTTGESPTLSHEEHKKVIEFVVDLVN-GRVPVI--AGTGSNATEEAISLTKFAE 90 (285)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHHHHhC-CCCeEE--EeCCCccHHHHHHHHHHHH
Confidence 45566777777778889999998865543322 222 22232222221 112221 12222 2334444444443
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHH-HHHHHHHcCCcEEEec
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+..-+ ....+++.+.+ ..+.++..++++.+..
T Consensus 91 -~~Gad~v~v~pP~--y~~~~~~~i~~~~~~i~~~~~~pi~lYn 131 (285)
T TIGR00674 91 -DVGADGFLVVTPY--YNKPTQEGLYQHFKAIAEEVDLPIILYN 131 (285)
T ss_pred -HcCCCEEEEcCCc--CCCCCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 7899987554322 22335555544 4445666789998873
No 277
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=40.22 E-value=1.5e+02 Score=28.32 Aligned_cols=86 Identities=14% Similarity=0.161 Sum_probs=50.9
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcC
Q 014320 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (427)
Q Consensus 212 ~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~ 291 (427)
++.+.++.+.+.+++.|+.+..-+-+.+.++ .+++.|+.-..-.. ... .-...++.....|.|+.+.-.
T Consensus 73 l~~e~~~~L~~~~~~~Gi~~~stpfd~~svd----~l~~~~v~~~KIaS---~~~----~n~pLL~~~A~~gkPvilStG 141 (329)
T TIGR03569 73 LSEEDHRELKEYCESKGIEFLSTPFDLESAD----FLEDLGVPRFKIPS---GEI----TNAPLLKKIARFGKPVILSTG 141 (329)
T ss_pred CCHHHHHHHHHHHHHhCCcEEEEeCCHHHHH----HHHhcCCCEEEECc---ccc----cCHHHHHHHHhcCCcEEEECC
Confidence 5789999999999999999999988877664 34455543222100 000 002344555667888766554
Q ss_pred CC-HHH-HHHHHHHhhcCC
Q 014320 292 MS-MDA-MEEIAKARKAGQ 308 (427)
Q Consensus 292 ~~-~~~-~~~i~~~~~~G~ 308 (427)
.. .+. ...++.+++.|.
T Consensus 142 matl~Ei~~Av~~i~~~G~ 160 (329)
T TIGR03569 142 MATLEEIEAAVGVLRDAGT 160 (329)
T ss_pred CCCHHHHHHHHHHHHHcCC
Confidence 32 222 223444556664
No 278
>PRK14042 pyruvate carboxylase subunit B; Provisional
Probab=39.99 E-value=4.6e+02 Score=27.46 Aligned_cols=180 Identities=16% Similarity=0.070 Sum_probs=101.7
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcCC--------CCCcHHHHHHHHHHHhccccceece----eccccCCChhhHHHHH
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVIP--------INGSLTAGFEAYEKKAKNSCMDYGF----HMAITKWDEVVSDEME 189 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 189 (427)
...+++...+...-+.|+.++--.++. ...+-++.++..++..++..+..-+ ..+.....++..+...
T Consensus 23 ~~t~d~~~ia~~~d~~g~~siE~~gGatfd~~~rfl~edpwerl~~~r~~~pnt~lqmL~Rg~N~vGy~~~~d~vv~~~v 102 (596)
T PRK14042 23 MRTEDMLPICNKMDDVGFWAMEVWGGATFDACLRFLKEDPWSRLRQLRQALPNTQLSMLLRGQNLLGYRNYADDVVRAFV 102 (596)
T ss_pred CCHHHHHHHHHHHHhcCCCEEEeeCCcccceeecccCCCHHHHHHHHHHhCCCCceEEEeccccccccccCChHHHHHHH
Confidence 344555555566666777776543221 1125577777777777665444333 1233344556666555
Q ss_pred HHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEe-------cCChhhHHHHHHHHHHcCCCCcc---cc
Q 014320 190 VMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH-------AENGDAVFEGQKRMIELGITGPE---GH 259 (427)
Q Consensus 190 ~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H-------~e~~~~~~~~~~~l~~~G~~~~~---~~ 259 (427)
+...++|++.+.+|-.. .+-+.++..++.+++.|+.+..- ..+.+......+.+.+.|..... .-
T Consensus 103 ~~a~~~Gidv~Rifd~l-----nd~~n~~~~i~~~k~~G~~~~~~i~yt~sp~~t~e~~~~~ak~l~~~Gad~I~IkDta 177 (596)
T PRK14042 103 KLAVNNGVDVFRVFDAL-----NDARNLKVAIDAIKSHKKHAQGAICYTTSPVHTLDNFLELGKKLAEMGCDSIAIKDMA 177 (596)
T ss_pred HHHHHcCCCEEEEcccC-----cchHHHHHHHHHHHHcCCEEEEEEEecCCCCCCHHHHHHHHHHHHHcCCCEEEeCCcc
Confidence 54447999999887532 36778889999999999765443 23445555555667777764321 11
Q ss_pred cccCCHHHHHHHHHHHHHHH-HhcCCCEE-EEcCCCHHHHHHHHHHhhcCCCEE
Q 014320 260 ALSRPPLLEGEATTRAIRLA-EFVNTPLY-VVHVMSMDAMEEIAKARKAGQRVI 311 (427)
Q Consensus 260 ~~~~p~~~e~~a~~~~~~~~-~~~g~~~~-i~H~~~~~~~~~i~~~~~~G~~v~ 311 (427)
....|.. +.+.+... +..+.+++ .+|.+..-++...-.+.+.|+.+.
T Consensus 178 G~l~P~~-----v~~lv~alk~~~~ipi~~H~Hnt~Gla~an~laAieaGad~i 226 (596)
T PRK14042 178 GLLTPTV-----TVELYAGLKQATGLPVHLHSHSTSGLASICHYEAVLAGCNHI 226 (596)
T ss_pred cCCCHHH-----HHHHHHHHHhhcCCEEEEEeCCCCCcHHHHHHHHHHhCCCEE
Confidence 1223322 22222222 22345532 456666555555666678898764
No 279
>PRK09875 putative hydrolase; Provisional
Probab=39.97 E-value=1.3e+02 Score=28.35 Aligned_cols=44 Identities=18% Similarity=0.160 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEcCCCH-HHHHHHHHHhhcCCC
Q 014320 265 PLLEGEATTRAIRLAEFVNTPLYVVHVMSM-DAMEEIAKARKAGQR 309 (427)
Q Consensus 265 ~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~-~~~~~i~~~~~~G~~ 309 (427)
...|...++.+...+.++|+++ +.|.+.. ...+.++.+++.|++
T Consensus 134 t~~E~kvl~Aaa~a~~~TG~pi-~~Ht~~~~~g~e~l~il~e~Gvd 178 (292)
T PRK09875 134 TPLEEKVFIAAALAHNQTGRPI-STHTSFSTMGLEQLALLQAHGVD 178 (292)
T ss_pred CHHHHHHHHHHHHHHHHHCCcE-EEcCCCccchHHHHHHHHHcCcC
Confidence 4445566667777788899987 6676553 567889999999984
No 280
>TIGR01949 AroFGH_arch predicted phospho-2-dehydro-3-deoxyheptonate aldolase. Together these two genes appear to perform the synthesis of 3-dehydroquinate. It is presumed that the substrates and the chemical transformations involved are identical, but this has not yet been proven experimentally.
Probab=39.84 E-value=1.8e+02 Score=26.62 Aligned_cols=108 Identities=9% Similarity=-0.012 Sum_probs=56.3
Q ss_pred ChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhcccccee--ceeccccCCChhhHHHHHHHHHHcCCCeE
Q 014320 123 TIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDY--GFHMAITKWDEVVSDEMEVMVKEKGINSF 200 (427)
Q Consensus 123 ~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~g~~~i 200 (427)
..+++....+.++.+|+.+++-... ................+.+ ++..+...........+++.+ +.|++.+
T Consensus 34 ~~~~~~~~~~~a~~~~~~~v~~~p~-----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~al-~~Ga~~v 107 (258)
T TIGR01949 34 GLVDIRKTVNEVAEGGADAVLLHKG-----IVRRGHRGYGKDVGLIIHLSASTSLSPDPNDKRIVTTVEDAI-RMGADAV 107 (258)
T ss_pred CcCCHHHHHHHHHhcCCCEEEeCcc-----hhhhcccccCCCCcEEEEEcCCCCCCCCCCcceeeeeHHHHH-HCCCCEE
Confidence 3456666688899999999874321 1111111111111111112 111111111112335577777 7899988
Q ss_pred EEEEecCCCc-cCCHHHHHHHHHHHHHcCCcEEEecC
Q 014320 201 KFFMAYKGSF-MINDELLIEGFKRCKSLGALAMVHAE 236 (427)
Q Consensus 201 k~~~~~~~~~-~~~~~~l~~~~~~a~~~g~~v~~H~e 236 (427)
.+........ .--.+++.++.+.++++|+++.+..+
T Consensus 108 ~~~~~~g~~~~~~~~~~~~~i~~~~~~~g~~liv~~~ 144 (258)
T TIGR01949 108 SIHVNVGSDTEWEQIRDLGMIAEICDDWGVPLLAMMY 144 (258)
T ss_pred EEEEecCCchHHHHHHHHHHHHHHHHHcCCCEEEEEe
Confidence 7766432110 01124567788888999999988543
No 281
>PRK09234 fbiC FO synthase; Reviewed
Probab=39.25 E-value=5.6e+02 Score=28.20 Aligned_cols=124 Identities=15% Similarity=-0.019 Sum_probs=72.4
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhH-----------HHHHHHHHH
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAV-----------FEGQKRMIE 250 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~-----------~~~~~~l~~ 250 (427)
++..+..++.. ..|+..+.+.. .. .+..+.+.+.++++..++..-.+++|+.++.++ .+..+++.+
T Consensus 560 eeI~~~a~ea~-~~G~tev~i~g-G~-~p~~~~~~y~~lir~IK~~~p~i~i~afsp~Ei~~~a~~~Gl~~~e~l~~Lke 636 (843)
T PRK09234 560 DEVADRAWEAW-VAGATEVCMQG-GI-HPELPGTGYADLVRAVKARVPSMHVHAFSPMEIVNGAARLGLSIREWLTALRE 636 (843)
T ss_pred HHHHHHHHHHH-HCCCCEEEEec-CC-CCCcCHHHHHHHHHHHHHhCCCeeEEecChHHHHHHHHHcCCCHHHHHHHHHH
Confidence 34445555555 67888776652 22 234677888889998888776789997655333 445567888
Q ss_pred cCCCCccc-ccc---------cCCHHHHHHHHHHHHHHHHhcCCC----EEEEcCCCHH-HHHHHHHHhhcCC
Q 014320 251 LGITGPEG-HAL---------SRPPLLEGEATTRAIRLAEFVNTP----LYVVHVMSMD-AMEEIAKARKAGQ 308 (427)
Q Consensus 251 ~G~~~~~~-~~~---------~~p~~~e~~a~~~~~~~~~~~g~~----~~i~H~~~~~-~~~~i~~~~~~G~ 308 (427)
.|+....+ ... ..|.......-.+.++.+++.|.+ ..+.|..+.+ -++.+..+|+.+.
T Consensus 637 AGLds~pgt~aeil~d~vr~~i~p~k~~~~~wle~i~~Ah~lGi~~~stmm~G~~Et~edrv~hl~~LreLq~ 709 (843)
T PRK09234 637 AGLDTIPGTAAEILDDEVRWVLTKGKLPTAEWIEVVTTAHEVGLRSSSTMMYGHVDTPRHWVAHLRVLRDIQD 709 (843)
T ss_pred hCcCccCCCchhhCCHHHHhhcCCCCCCHHHHHHHHHHHHHcCCCcccceEEcCCCCHHHHHHHHHHHHhcCc
Confidence 89865432 111 112121122234566667777654 5677776643 3455666666543
No 282
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=38.90 E-value=3.3e+02 Score=25.40 Aligned_cols=109 Identities=13% Similarity=-0.063 Sum_probs=58.5
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 192 (427)
+..+.+.+....+..+..||..+.-.+..+.. +.. +.++...+.. .+.++-.+. + ....+.++..+...
T Consensus 16 g~iD~~~l~~l~~~l~~~Gv~gi~v~GstGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi~gv--~--~~t~~~i~~a~~a~ 91 (289)
T cd00951 16 GSFDEDAYRAHVEWLLSYGAAALFAAGGTGEFFSLTPDEYAQVVRAAVEETAGRVPVLAGA--G--YGTATAIAYAQAAE 91 (289)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCCEEEec--C--CCHHHHHHHHHHHH
Confidence 45567777777888899999999866544322 222 2233333322 222222221 2 23344444444443
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHHHH-HHHHHcCCcEEEec
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+.. | .....+++.+.+-+ +.+...++++.+..
T Consensus 92 -~~Gad~v~~~p-P-~y~~~~~~~i~~~f~~v~~~~~~pi~lYn 132 (289)
T cd00951 92 -KAGADGILLLP-P-YLTEAPQEGLYAHVEAVCKSTDLGVIVYN 132 (289)
T ss_pred -HhCCCEEEECC-C-CCCCCCHHHHHHHHHHHHhcCCCCEEEEe
Confidence 78999875432 2 12234666555544 45556789988874
No 283
>cd00945 Aldolase_Class_I Class I aldolases. The class I aldolases use an active-site lysine which stablilzes a reaction intermediates via Schiff base formation, and have TIM beta/alpha barrel fold. The members of this family include 2-keto-3-deoxy-6-phosphogluconate (KDPG) and 2-keto-4-hydroxyglutarate (KHG) aldolases, transaldolase, dihydrodipicolinate synthase sub-family, Type I 3-dehydroquinate dehydratase, DeoC and DhnA proteins, and metal-independent fructose-1,6-bisphosphate aldolase. Although structurally similar, the class II aldolases use a different mechanism and are believed to have an independent evolutionary origin.
Probab=38.87 E-value=2.5e+02 Score=23.93 Aligned_cols=105 Identities=13% Similarity=-0.016 Sum_probs=53.9
Q ss_pred ChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhc--cccceeceeccc-cCCChhhHHHHHHHHHHcCCCe
Q 014320 123 TIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK--NSCMDYGFHMAI-TKWDEVVSDEMEVMVKEKGINS 199 (427)
Q Consensus 123 ~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~g~~~ 199 (427)
+.+.+....+.++..|+..+.-.+ +.++...+... +..+-.+..... ....++..+..++.. +.|++.
T Consensus 11 d~~~~~~~~~~~~~~gv~gi~~~g--------~~i~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~a~~a~-~~Gad~ 81 (201)
T cd00945 11 TLEDIAKLCDEAIEYGFAAVCVNP--------GYVRLAADALAGSDVPVIVVVGFPTGLTTTEVKVAEVEEAI-DLGADE 81 (201)
T ss_pred CHHHHHHHHHHHHHhCCcEEEECH--------HHHHHHHHHhCCCCCeEEEEecCCCCCCcHHHHHHHHHHHH-HcCCCE
Confidence 456677778888999998876432 34444443322 222222211110 011345556566665 789998
Q ss_pred EEEEEecCCCccCCHHHHHHHHHHHHH---cCCcEEEecC
Q 014320 200 FKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAE 236 (427)
Q Consensus 200 ik~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~e 236 (427)
+.+...+...+..+++.+.+.++...+ .++++.+...
T Consensus 82 i~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~pv~iy~~ 121 (201)
T cd00945 82 IDVVINIGSLKEGDWEEVLEEIAAVVEAADGGLPLKVILE 121 (201)
T ss_pred EEEeccHHHHhCCCHHHHHHHHHHHHHHhcCCceEEEEEE
Confidence 877543221111124444444333333 4899888753
No 284
>cd08205 RuBisCO_IV_RLP Ribulose bisphosphate carboxylase like proteins, Rubisco-Form IV. Ribulose bisphosphate carboxylase (Rubisco) plays an important role in the Calvin reductive pentose phosphate pathway. It catalyzes the primary CO2 fixation step. Rubisco is activated by carbamylation of an active site lysine, stabilized by a divalent cation, which then catalyzes the proton abstraction from the substrate ribulose 1,5 bisphosphate (RuBP) and leads to the formation of two molecules of 3-phosphoglycerate. Members of the Rubisco family can be divided into 4 subgroups, Form I-IV, which differ in their taxonomic distribution and subunit composition. Form I-III have Rubisco activity, while Form IV, also called Rubisco-like proteins (RLP), are missing critical active site residues and therefore do not catalyze CO2 fixation. They are believed to utilize a related enzymatic mechanism, but have divergent functions, like for example 2,3-diketo-5-methylthiopentyl-1-phosphate enolase or 5-methyl
Probab=37.92 E-value=2.8e+02 Score=27.00 Aligned_cols=107 Identities=12% Similarity=0.027 Sum_probs=53.0
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcCCCCC---cHHHHHHHHHHHhcccc----ceeceeccccCCChhhHHHHHHHHHH
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKNSC----MDYGFHMAITKWDEVVSDEMEVMVKE 194 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~ 194 (427)
.+++.+.......+.+|+-.+.|.....+. ...+.++...+...+.. -...+....+...++..+..+... +
T Consensus 143 ld~~~la~~~~~l~~gGvD~Ikdde~~ge~~~~~~eER~~~v~~av~~a~~~TG~~~~y~~nit~~~~e~i~~a~~a~-~ 221 (367)
T cd08205 143 LSPEELAELAYELALGGIDLIKDDELLADQPYAPFEERVRACMEAVRRANEETGRKTLYAPNITGDPDELRRRADRAV-E 221 (367)
T ss_pred CCHHHHHHHHHHHHhcCCCeeeccccccCcccCCHHHHHHHHHHHHHHHHHhhCCcceEEEEcCCCHHHHHHHHHHHH-H
Confidence 467777777888899999999887644332 33333333222221100 000111122222344444444443 6
Q ss_pred cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
.|++.+-+..-+. ....++.+.+ +.+++++.|...
T Consensus 222 ~Gad~vmv~~~~~-----g~~~~~~l~~---~~~lpi~~H~a~ 256 (367)
T cd08205 222 AGANALLINPNLV-----GLDALRALAE---DPDLPIMAHPAF 256 (367)
T ss_pred cCCCEEEEecccc-----cccHHHHHHh---cCCCeEEEccCc
Confidence 8888764432211 1112333322 338999999654
No 285
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=37.70 E-value=3.4e+02 Score=25.20 Aligned_cols=109 Identities=11% Similarity=-0.082 Sum_probs=58.0
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHHH---HHHHHHHHh-ccccceeceeccccC-CChhhHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKA-KNSCMDYGFHMAITK-WDEVVSDEMEVM 191 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~l 191 (427)
+..+.+.+....+..+..|+..+.-.+..+.. +..+ .++...+.. .+..+-. +... ..++.++..+..
T Consensus 17 g~id~~~~~~~i~~l~~~Gv~gl~~~GstGE~~~Lt~~Er~~l~~~~~~~~~~~~~vi~----gv~~~st~~~i~~a~~a 92 (289)
T PF00701_consen 17 GSIDEDALKRLIDFLIEAGVDGLVVLGSTGEFYSLTDEERKELLEIVVEAAAGRVPVIA----GVGANSTEEAIELARHA 92 (289)
T ss_dssp SSB-HHHHHHHHHHHHHTTSSEEEESSTTTTGGGS-HHHHHHHHHHHHHHHTTSSEEEE----EEESSSHHHHHHHHHHH
T ss_pred cCcCHHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHccCceEEEe----cCcchhHHHHHHHHHHH
Confidence 44566777777888899999999876544332 2222 222222222 1222222 2222 234445544544
Q ss_pred HHHcCCCeEEEEEecCCCccCCHHHHH-HHHHHHHHcCCcEEEec
Q 014320 192 VKEKGINSFKFFMAYKGSFMINDELLI-EGFKRCKSLGALAMVHA 235 (427)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~-~~~~~a~~~g~~v~~H~ 235 (427)
. +.|++.+-+.. |. ....+++.+. ..-+.+...++++.++.
T Consensus 93 ~-~~Gad~v~v~~-P~-~~~~s~~~l~~y~~~ia~~~~~pi~iYn 134 (289)
T PF00701_consen 93 Q-DAGADAVLVIP-PY-YFKPSQEELIDYFRAIADATDLPIIIYN 134 (289)
T ss_dssp H-HTT-SEEEEEE-ST-SSSCCHHHHHHHHHHHHHHSSSEEEEEE
T ss_pred h-hcCceEEEEec-cc-cccchhhHHHHHHHHHHhhcCCCEEEEE
Confidence 4 78999876543 22 2234555544 45556667789999884
No 286
>TIGR03700 mena_SCO4494 putative menaquinone biosynthesis protein, SCO4494 family. Members of this protein family appear to be involved in menaquinone biosynthesis by an alternate pathway via futalosine, based on close phylogenetic correlation with known markers of the futalosine pathway, gene clustering in many organisms, and paralogy with the SCO4550 protein.
Probab=37.11 E-value=3.9e+02 Score=25.75 Aligned_cols=124 Identities=13% Similarity=0.071 Sum_probs=66.8
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhh-----------HHHHHHHHHH
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDA-----------VFEGQKRMIE 250 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~-----------~~~~~~~l~~ 250 (427)
++..+.+++.. ..|+..+-+. +.. .+....+.+.++++..++..-.+++|+-...+ .++..+++.+
T Consensus 82 eeI~~~a~~~~-~~G~~~v~l~-~G~-~p~~~~~~~~e~i~~Ik~~~p~i~i~~~~~~ei~~~~~~~g~~~~e~l~~Lke 158 (351)
T TIGR03700 82 EEIVARVKEAY-APGATEVHIV-GGL-HPNLPFEWYLDMIRTLKEAYPDLHVKAFTAVEIHHFSKISGLPTEEVLDELKE 158 (351)
T ss_pred HHHHHHHHHHH-HCCCcEEEEe-cCC-CCCCCHHHHHHHHHHHHHHCCCceEEeCCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 44445555444 5777766554 222 22356678889999888875457777644332 2344567888
Q ss_pred cCCCCccc-----c-----cccCCHHHHHHHHHHHHHHHHhcCCC----EEEEcCCCH-HHHHHHHHHhhcCC
Q 014320 251 LGITGPEG-----H-----ALSRPPLLEGEATTRAIRLAEFVNTP----LYVVHVMSM-DAMEEIAKARKAGQ 308 (427)
Q Consensus 251 ~G~~~~~~-----~-----~~~~p~~~e~~a~~~~~~~~~~~g~~----~~i~H~~~~-~~~~~i~~~~~~G~ 308 (427)
.|+....+ + ....|.....+...+.++.+++.|.+ +.+.|..+. +.++.+..+++.+.
T Consensus 159 AGld~~~~~g~E~~~~~v~~~i~~~~~~~~~~l~~i~~a~~~Gi~~~sg~i~GlgEt~edrv~~l~~Lr~l~~ 231 (351)
T TIGR03700 159 AGLDSMPGGGAEIFAEEVRQQICPEKISAERWLEIHRTAHELGLKTNATMLYGHIETPAHRVDHMLRLRELQD 231 (351)
T ss_pred cCCCcCCCCcccccCHHHHhhcCCCCCCHHHHHHHHHHHHHcCCCcceEEEeeCCCCHHHHHHHHHHHHHhhH
Confidence 88854331 1 11223221123334556666666654 445565443 34555666665544
No 287
>COG0502 BioB Biotin synthase and related enzymes [Coenzyme metabolism]
Probab=36.93 E-value=2.7e+02 Score=26.69 Aligned_cols=64 Identities=19% Similarity=0.159 Sum_probs=37.4
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHH-HcCCcEEEecCChhhHHHHHHHHHHcCCCCccccc
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCK-SLGALAMVHAENGDAVFEGQKRMIELGITGPEGHA 260 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~-~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~ 260 (427)
+.|+..+-+..++.+ ..-..+.+.++++..+ +.|+.+.+-.- ....+..+.+.+.|+..-.+.+
T Consensus 98 ~~Ga~r~c~~aagr~-~~~~~~~i~~~v~~Vk~~~~le~c~slG--~l~~eq~~~L~~aGvd~ynhNL 162 (335)
T COG0502 98 AAGATRFCMGAAGRG-PGRDMEEVVEAIKAVKEELGLEVCASLG--MLTEEQAEKLADAGVDRYNHNL 162 (335)
T ss_pred HcCCceEEEEEeccC-CCccHHHHHHHHHHHHHhcCcHHhhccC--CCCHHHHHHHHHcChhheeccc
Confidence 677776666666665 3345666777777666 67766655442 1222333567777776544433
No 288
>KOG4127 consensus Renal dipeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=36.84 E-value=4e+02 Score=25.81 Aligned_cols=38 Identities=11% Similarity=0.108 Sum_probs=24.9
Q ss_pred CCCEEEEcCCCHH--------HHHHHHHHhhcCCCEEEecCcccee
Q 014320 283 NTPLYVVHVMSMD--------AMEEIAKARKAGQRVIGEPVVSGLV 320 (427)
Q Consensus 283 g~~~~i~H~~~~~--------~~~~i~~~~~~G~~v~~~~~p~~l~ 320 (427)
.+|+.++|-+... +-+.++..++.|--|.+...+.++.
T Consensus 266 ~APVIFSHSsA~~vcns~rNVPDdVL~llk~NgGvVMVnfy~~~is 311 (419)
T KOG4127|consen 266 RAPVIFSHSSAYSVCNSSRNVPDDVLQLLKENGGVVMVNFYPGFIS 311 (419)
T ss_pred cCceEeecccHHHHhcCccCCcHHHHHHHhhcCCEEEEEeeccccc
Confidence 4688899975311 1366788888887676666665443
No 289
>COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog [Amino acid transport and metabolism]
Probab=36.71 E-value=3.8e+02 Score=25.48 Aligned_cols=29 Identities=10% Similarity=0.295 Sum_probs=20.2
Q ss_pred hHHHHHHHHHhcCCCCHHHHHHHHchhhhc
Q 014320 396 RMHLVWDTMVESGQISVTDYVRLTSTEWGR 425 (427)
Q Consensus 396 ~l~~~~~~~~~~~~l~l~~~v~~~t~npA~ 425 (427)
.+|.+...+. +.+.+-+++-+.+..|--|
T Consensus 277 ~l~~l~~~L~-~~G~~e~~i~~i~~~N~lR 305 (313)
T COG2355 277 KLPNLTAALI-ERGYSEEEIEKIAGENWLR 305 (313)
T ss_pred HHHHHHHHHH-HcCCCHHHHHHHHHHhHHH
Confidence 5566654444 4459999999988888654
No 290
>COG1820 NagA N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]
Probab=36.42 E-value=3.3e+02 Score=26.59 Aligned_cols=52 Identities=15% Similarity=0.110 Sum_probs=27.9
Q ss_pred hhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc----C-CcEEEecCChh
Q 014320 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL----G-ALAMVHAENGD 239 (427)
Q Consensus 183 ~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~----g-~~v~~H~e~~~ 239 (427)
+.++.+.+...+.|..++-.- ..+.+.|.+.+.++..+++ + ..+-+|.|++-
T Consensus 74 ~~l~~i~~~~~~~GtTsfLpT-----~iT~~~e~i~~al~~~~e~~~~~ga~ilGiHLEGP~ 130 (380)
T COG1820 74 ETLETMAEAHLRHGTTSFLPT-----LITASLEKIKAALRAIREAIAKGGAQILGIHLEGPF 130 (380)
T ss_pred HHHHHHHHHhhhcCeeeeeee-----cccCCHHHHHHHHHHHHHHHhccCCceEEEEeecCc
Confidence 445566655546676554211 1234566666555544432 2 34678888873
No 291
>cd07944 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase-like, N-terminal catalytic TIM barrel domain. This family of bacterial enzymes is sequence-similar to 4-hydroxy-2-oxovalerate aldolase (HOA) but its exact function is unknown. This family includes the Bacteroides vulgatus Bvu_2661 protein and belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues t
Probab=35.98 E-value=3.5e+02 Score=24.90 Aligned_cols=103 Identities=14% Similarity=-0.021 Sum_probs=53.4
Q ss_pred HHHHHcCCceEEecCcCCCCC--cHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecCC
Q 014320 131 QAAALAGGTTMHIDFVIPING--SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKG 208 (427)
Q Consensus 131 ~~~~l~~GvTtv~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~ 208 (427)
...+...|+..++-... ... ...+.++..++.+. .+.+...... ..+.+.+.++.+.+.+.|++.+.+. +..|
T Consensus 88 l~~a~~~gv~~iri~~~-~~~~~~~~~~i~~ak~~G~--~v~~~~~~a~-~~~~~~~~~~~~~~~~~g~~~i~l~-DT~G 162 (266)
T cd07944 88 LEPASGSVVDMIRVAFH-KHEFDEALPLIKAIKEKGY--EVFFNLMAIS-GYSDEELLELLELVNEIKPDVFYIV-DSFG 162 (266)
T ss_pred HHHHhcCCcCEEEEecc-cccHHHHHHHHHHHHHCCC--eEEEEEEeec-CCCHHHHHHHHHHHHhCCCCEEEEe-cCCC
Confidence 45567788877653321 111 22233333333332 2222222111 2334444444433336788876432 2222
Q ss_pred CccCCHHHHHHHHHHHHHc-C--CcEEEecCChhh
Q 014320 209 SFMINDELLIEGFKRCKSL-G--ALAMVHAENGDA 240 (427)
Q Consensus 209 ~~~~~~~~l~~~~~~a~~~-g--~~v~~H~e~~~~ 240 (427)
..+++.+.++++..++. + +++.+|+.++..
T Consensus 163 --~~~P~~v~~lv~~l~~~~~~~~~i~~H~Hn~~G 195 (266)
T cd07944 163 --SMYPEDIKRIISLLRSNLDKDIKLGFHAHNNLQ 195 (266)
T ss_pred --CCCHHHHHHHHHHHHHhcCCCceEEEEeCCCcc
Confidence 46788898888887653 4 889999877643
No 292
>PRK08745 ribulose-phosphate 3-epimerase; Provisional
Probab=35.84 E-value=3.3e+02 Score=24.46 Aligned_cols=47 Identities=19% Similarity=0.128 Sum_probs=27.1
Q ss_pred HHHHHHHHHcCCCeEEE-EEecCCCcc--CCHHHHHHHHHHHHHcCCcEEEec
Q 014320 186 DEMEVMVKEKGINSFKF-FMAYKGSFM--INDELLIEGFKRCKSLGALAMVHA 235 (427)
Q Consensus 186 ~~~~~l~~~~g~~~ik~-~~~~~~~~~--~~~~~l~~~~~~a~~~g~~v~~H~ 235 (427)
++++++. +.|++.+.+ .|+.+..+. +.++.++.+.+.. .++++.+|.
T Consensus 20 ~~i~~l~-~~g~d~lHiDimDG~FVPN~tfg~~~i~~lr~~~--~~~~~dvHL 69 (223)
T PRK08745 20 EEVDNVL-KAGADWVHFDVMDNHYVPNLTIGPMVCQALRKHG--ITAPIDVHL 69 (223)
T ss_pred HHHHHHH-HcCCCEEEEecccCccCCCcccCHHHHHHHHhhC--CCCCEEEEe
Confidence 4455554 678888765 345444433 4565555544310 378899995
No 293
>PRK12858 tagatose 1,6-diphosphate aldolase; Reviewed
Probab=35.28 E-value=4.2e+02 Score=25.55 Aligned_cols=46 Identities=11% Similarity=0.191 Sum_probs=33.1
Q ss_pred HHHHHHHcCCCeEEEEEecCCCcc-----CCHHHHHHHHHHHHHcCCcEEEe
Q 014320 188 MEVMVKEKGINSFKFFMAYKGSFM-----INDELLIEGFKRCKSLGALAMVH 234 (427)
Q Consensus 188 ~~~l~~~~g~~~ik~~~~~~~~~~-----~~~~~l~~~~~~a~~~g~~v~~H 234 (427)
++++. +.|++.+|+.+-++.... ...+.+.++.+.|+++|+|+.+.
T Consensus 112 ve~a~-~~GAdAVk~lv~~~~d~~~~~~~~~~~~l~rv~~ec~~~giPlllE 162 (340)
T PRK12858 112 VRRIK-EAGADAVKLLLYYRPDEDDAINDRKHAFVERVGAECRANDIPFFLE 162 (340)
T ss_pred HHHHH-HcCCCEEEEEEEeCCCcchHHHHHHHHHHHHHHHHHHHcCCceEEE
Confidence 45555 789999998776552211 12345788999999999999885
No 294
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=35.10 E-value=3.8e+02 Score=24.96 Aligned_cols=109 Identities=8% Similarity=-0.100 Sum_probs=56.9
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHhccccceeceeccccC-CChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAKNSCMDYGFHMAITK-WDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ 192 (427)
+..+.+.+....+..+..||..+.-.+..+.. +.. +.++...+... ..+.+ ..+... ..++.++..+...
T Consensus 17 g~iD~~~l~~~i~~l~~~Gv~gi~~~Gs~GE~~~ls~~Er~~~~~~~~~~~~-~~~~v--i~gv~~~~~~~~i~~a~~a~ 93 (292)
T PRK03170 17 GSVDFAALRKLVDYLIANGTDGLVVVGTTGESPTLTHEEHEELIRAVVEAVN-GRVPV--IAGTGSNSTAEAIELTKFAE 93 (292)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECCcCCccccCCHHHHHHHHHHHHHHhC-CCCcE--EeecCCchHHHHHHHHHHHH
Confidence 44566777777888899999998855433222 222 22333333221 11111 112221 2344444444443
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHH-HHHHHHHcCCcEEEe
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVH 234 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~a~~~g~~v~~H 234 (427)
+.|++.+-+.. +.....+++.+.+ .-+.+...++++.+.
T Consensus 94 -~~G~d~v~~~p--P~~~~~~~~~i~~~~~~ia~~~~~pv~lY 133 (292)
T PRK03170 94 -KAGADGALVVT--PYYNKPTQEGLYQHFKAIAEATDLPIILY 133 (292)
T ss_pred -HcCCCEEEECC--CcCCCCCHHHHHHHHHHHHhcCCCCEEEE
Confidence 78998875532 2122335555554 444566678998887
No 295
>PLN03055 AMP deaminase; Provisional
Probab=34.82 E-value=1.3e+02 Score=31.41 Aligned_cols=59 Identities=14% Similarity=0.002 Sum_probs=35.1
Q ss_pred EEcCCCH-HHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEec
Q 014320 288 VVHVMSM-DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGT 366 (427)
Q Consensus 288 i~H~~~~-~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgS 366 (427)
|.|.... +.-.+....+..++.+.+ ||...... + ..+ ..-.+..+++.|+.++|+|
T Consensus 442 IgHGi~l~~dP~L~yl~~~~qI~Lev--CPlSN~~l---~--------~~y----------~~HP~~~~~~~Gl~VSInT 498 (602)
T PLN03055 442 IAHGNNLRKSPGLQYLYYLAQIGLAM--SPLSNNSL---F--------LDY----------HRNPFPMFFARGLNVSLST 498 (602)
T ss_pred ecCccccCCCHHHHHHHHHcCCeEEE--ccCcchhh---c--------cch----------hhChHHHHHHCCCEEEEcC
Confidence 6666543 223556667777776665 77532210 0 011 1123677999999999999
Q ss_pred CCC
Q 014320 367 DHC 369 (427)
Q Consensus 367 D~~ 369 (427)
|..
T Consensus 499 DDP 501 (602)
T PLN03055 499 DDP 501 (602)
T ss_pred CCc
Confidence 963
No 296
>TIGR00423 radical SAM domain protein, CofH subfamily. This protein family includes the CofH protein of coenzyme F(420) biosynthesis from Methanocaldococcus jannaschii, but appears to hit genomes more broadly than just the subset that make coenzyme F(420), so that narrower group is being built as a separate family.
Probab=34.66 E-value=4e+02 Score=25.10 Aligned_cols=123 Identities=21% Similarity=0.181 Sum_probs=67.2
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhh-----------HHHHHHHHHH
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDA-----------VFEGQKRMIE 250 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~-----------~~~~~~~l~~ 250 (427)
++..+.+++.. ..|+..+.+..+ ..+..+.+.+.++++..++....+.+|+-...+ ..+..+++.+
T Consensus 39 eeI~~~~~~~~-~~G~~~i~l~gg--~~~~~~~~~~~~i~~~Ik~~~~~i~~~~~s~~e~~~~~~~~g~~~~e~l~~Lke 115 (309)
T TIGR00423 39 EEILEKVKEAV-AKGATEVCIQGG--LNPQLDIEYYEELFRAIKQEFPDVHIHAFSPMEVYFLAKNEGLSIEEVLKRLKK 115 (309)
T ss_pred HHHHHHHHHHH-HCCCCEEEEecC--CCCCCCHHHHHHHHHHHHHHCCCceEEecCHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 44555555544 567776655422 123456777888888888877667777544322 2455677888
Q ss_pred cCCCCcccc-c---------ccCCHHHHHHHHHHHHHHHHhcCCC----EEEEcCCCH-HHHHHHHHHhhcC
Q 014320 251 LGITGPEGH-A---------LSRPPLLEGEATTRAIRLAEFVNTP----LYVVHVMSM-DAMEEIAKARKAG 307 (427)
Q Consensus 251 ~G~~~~~~~-~---------~~~p~~~e~~a~~~~~~~~~~~g~~----~~i~H~~~~-~~~~~i~~~~~~G 307 (427)
.|+...... . ...|.....+...+.++.+++.|.+ ..+.|..+. +-++.+..+++.+
T Consensus 116 AGl~~i~~~g~E~l~~~~~~~i~~~~~t~~~~l~~i~~a~~~Gi~~~s~~iiG~~Et~ed~~~~l~~lr~l~ 187 (309)
T TIGR00423 116 AGLDSMPGTGAEILDDSVRRKICPNKLSSDEWLEVIKTAHRLGIPTTATMMFGHVENPEHRVEHLLRIRKIQ 187 (309)
T ss_pred cCCCcCCCCcchhcCHHHHHhhCCCCCCHHHHHHHHHHHHHcCCCceeeEEecCCCCHHHHHHHHHHHHhhc
Confidence 887544211 0 1113222223345677777777765 334444332 3345556666544
No 297
>TIGR01859 fruc_bis_ald_ fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist. This model represents of one of several subtypes of the class II fructose-1,6-bisphosphate aldolase, an enzyme of glycolysis. The subtypes are split into several models to allow separation of a family of tagatose bisphosphate aldolases. This form is found in Gram-positive bacteria, a variety of Gram-negative, and in amitochondriate protists. The class II enzymes share homology with tagatose bisphosphate aldolase but not with class I aldolase.
Probab=34.63 E-value=3.9e+02 Score=24.96 Aligned_cols=104 Identities=19% Similarity=0.064 Sum_probs=0.0
Q ss_pred HHHHHHHHcCCceEEe-cCcCCCCCcHHHHHHHHHHHhccccceeceeccccCCChh----------hHHHHHHHHHHcC
Q 014320 128 FSGQAAALAGGTTMHI-DFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEV----------VSDEMEVMVKEKG 196 (427)
Q Consensus 128 ~~~~~~~l~~GvTtv~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~~g 196 (427)
....+.++..|+|++. |....+.....+..+...+......+.+..-.+.....++ ..++..+..++.|
T Consensus 87 ~e~i~~ai~~Gf~sVmid~s~l~~~eni~~t~~v~~~a~~~gv~Ve~ElG~~gg~ed~~~g~~~~~t~~eea~~f~~~tg 166 (282)
T TIGR01859 87 YESCIKAIKAGFSSVMIDGSHLPFEENLALTKKVVEIAHAKGVSVEAELGTLGGIEDGVDEKEAELADPDEAEQFVKETG 166 (282)
T ss_pred HHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHHHHHcCCEEEEeeCCCcCccccccccccccCCHHHHHHHHHHHC
Q ss_pred CCeEEE-----EEecCCCccCCHHHHHHHHHHHHHcCCcEEEe
Q 014320 197 INSFKF-----FMAYKGSFMINDELLIEGFKRCKSLGALAMVH 234 (427)
Q Consensus 197 ~~~ik~-----~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H 234 (427)
++.+-+ +..+.+.+..+.+.|+++.+.. ++|+..|
T Consensus 167 vD~Lavs~Gt~hg~~~~~~~l~~e~L~~i~~~~---~iPlv~h 206 (282)
T TIGR01859 167 VDYLAAAIGTSHGKYKGEPGLDFERLKEIKELT---NIPLVLH 206 (282)
T ss_pred cCEEeeccCccccccCCCCccCHHHHHHHHHHh---CCCEEEE
No 298
>cd08213 RuBisCO_large_III Ribulose bisphosphate carboxylase large chain, Form III. Ribulose bisphosphate carboxylase (Rubisco) plays an important role in the Calvin reductive pentose phosphate pathway. It catalyzes the primary CO2 fixation step. Rubisco is activated by carbamylation of an active site lysine, stabilized by a divalent cation, which then catalyzes the proton abstraction from the substrate ribulose 1,5 bisphosphate (RuBP) and leads to the formation of two molecules of 3-phosphoglycerate. Members of the Rubisco family can be divided into 4 subgroups, Form I-IV , which differ in their taxonomic distribution and subunit composition. Form III is only found in archaea and forms large subunit oligomers (dimers or decamers) that do not include small subunits.
Probab=34.56 E-value=3.7e+02 Score=26.67 Aligned_cols=110 Identities=12% Similarity=-0.007 Sum_probs=58.4
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcCCCCC---cHHHHHHHHHHH----hccccceeceeccccCCChhhHHHHHHHHHH
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKK----AKNSCMDYGFHMAITKWDEVVSDEMEVMVKE 194 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 194 (427)
.+++.+...+.....+|+=-+-|-....+. ...+.++...+. ..+.--...+...++...++..+..+... +
T Consensus 144 lsp~~~a~~~y~~~~GGvD~iKDDE~l~~q~~~p~~~Rv~~~~~a~~~a~~eTG~~~~y~~NiT~~~~em~~ra~~a~-e 222 (412)
T cd08213 144 LSPEEHAEVAYEALVGGVDLVKDDENLTSQPFNRFEERAKESLKARDKAEAETGERKAYLANITAPVREMERRAELVA-D 222 (412)
T ss_pred CCHHHHHHHHHHHHhcCCcccccCccCCCCCCCCHHHHHHHHHHHHHHHHHhhCCcceEEEEecCCHHHHHHHHHHHH-H
Confidence 467777777888999998888775432222 333333333322 21111111111222333344444444444 6
Q ss_pred cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
.|...+-+-. ....-..++.+.+.+++.+++++.|...
T Consensus 223 ~G~~~~mv~~-----~~~G~~~l~~l~~~~~~~~l~ihaHra~ 260 (412)
T cd08213 223 LGGKYVMIDV-----VVAGWSALQYLRDLAEDYGLAIHAHRAM 260 (412)
T ss_pred hCCCeEEeec-----cccChHHHHHHHHhccccCeEEEECCCc
Confidence 7776543321 1233455777777777789999999543
No 299
>CHL00040 rbcL ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
Probab=34.46 E-value=4.1e+02 Score=26.91 Aligned_cols=110 Identities=13% Similarity=-0.009 Sum_probs=58.9
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcCCCCC---cHHHHHHHHHHHh----ccccceeceecccc-CCChhhHHHHHHHHH
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKA----KNSCMDYGFHMAIT-KWDEVVSDEMEVMVK 193 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~ 193 (427)
++++.+...+.....+|+=-+-|-....+. ...+.++...+.. .+.--...+...++ ...++..+..+...
T Consensus 180 Lsp~~~A~~~y~~~~GGvD~IKDDE~l~dq~~~p~~eRv~~~~~a~~~a~~eTG~~~~y~~NiTa~~~~em~~ra~~a~- 258 (475)
T CHL00040 180 LSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGTCEEMYKRAVFAR- 258 (475)
T ss_pred CCHHHHHHHHHHHHcCCCcccccCccCCCCCCCCHHHHHHHHHHHHHHHHHhhCCcceeeeccCCCCHHHHHHHHHHHH-
Confidence 467777777888899998888875433222 3333333333222 11110111112233 23344444444444
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
+.|...+-+-.. ......++.+.+.+++.+++++.|...
T Consensus 259 e~G~~~~mv~~~-----~~G~~al~~l~~~~~~~~l~IhaHrA~ 297 (475)
T CHL00040 259 ELGVPIVMHDYL-----TGGFTANTSLAHYCRDNGLLLHIHRAM 297 (475)
T ss_pred HcCCceEEEecc-----ccccchHHHHHHHhhhcCceEEecccc
Confidence 677766533221 123345778887777889999999543
No 300
>PRK13210 putative L-xylulose 5-phosphate 3-epimerase; Reviewed
Probab=34.31 E-value=3.7e+02 Score=24.61 Aligned_cols=46 Identities=17% Similarity=0.078 Sum_probs=30.5
Q ss_pred HHHHHHHHcCCCeEEEEEecC----CCccCCHHHHHHHHHHHHHcCCcEE
Q 014320 187 EMEVMVKEKGINSFKFFMAYK----GSFMINDELLIEGFKRCKSLGALAM 232 (427)
Q Consensus 187 ~~~~l~~~~g~~~ik~~~~~~----~~~~~~~~~l~~~~~~a~~~g~~v~ 232 (427)
+.-+.+.+.|.+.+.+..... ....++.+.+.++.+.++++|+.+.
T Consensus 20 e~~~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gl~i~ 69 (284)
T PRK13210 20 ERLVFAKELGFDFVEMSVDESDERLARLDWSKEERLSLVKAIYETGVRIP 69 (284)
T ss_pred HHHHHHHHcCCCeEEEecCCcccccccccCCHHHHHHHHHHHHHcCCCce
Confidence 333333478988888765321 1123467788889999999998875
No 301
>PRK14057 epimerase; Provisional
Probab=34.18 E-value=3.7e+02 Score=24.66 Aligned_cols=61 Identities=7% Similarity=-0.048 Sum_probs=35.0
Q ss_pred HHHHHHHHHHcCCCeEEE-EEecCCCc--cCCHHHHHHHHHHHHHcCCcEEEec--CChhhHHHHHHHHHHcCCC
Q 014320 185 SDEMEVMVKEKGINSFKF-FMAYKGSF--MINDELLIEGFKRCKSLGALAMVHA--ENGDAVFEGQKRMIELGIT 254 (427)
Q Consensus 185 ~~~~~~l~~~~g~~~ik~-~~~~~~~~--~~~~~~l~~~~~~a~~~g~~v~~H~--e~~~~~~~~~~~l~~~G~~ 254 (427)
.++++++. +.|++.+.+ .|+.+..+ .+.++.++.+. + .+++.+|. ++++. .++.+.+.|..
T Consensus 35 ~~el~~l~-~~g~d~lHiDVMDG~FVPNitfGp~~i~~i~----~-~~p~DvHLMV~~P~~---~i~~~~~aGad 100 (254)
T PRK14057 35 HRYLQQLE-ALNQPLLHLDLMDGQFCPQFTVGPWAVGQLP----Q-TFIKDVHLMVADQWT---AAQACVKAGAH 100 (254)
T ss_pred HHHHHHHH-HCCCCEEEEeccCCccCCccccCHHHHHHhc----c-CCCeeEEeeeCCHHH---HHHHHHHhCCC
Confidence 34555554 678888765 34544444 45677777772 2 68899995 44432 23444444443
No 302
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=33.77 E-value=3.9e+02 Score=24.72 Aligned_cols=160 Identities=15% Similarity=0.055 Sum_probs=0.0
Q ss_pred hHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEe
Q 014320 126 DFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMA 205 (427)
Q Consensus 126 ~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~ 205 (427)
..+.+...|+++|+|.- ...+.++..++.....++-+..+........ .+..-+..++.|++++-+
T Consensus 63 ~Iq~A~~rAL~~g~t~~---------~~lel~~~~r~~~~~~Pivlm~Y~Npi~~~G--ie~F~~~~~~~GvdGliv--- 128 (265)
T COG0159 63 TIQAAHLRALAAGVTLE---------DTLELVEEIRAKGVKVPIVLMTYYNPIFNYG--IEKFLRRAKEAGVDGLLV--- 128 (265)
T ss_pred HHHHHHHHHHHCCCCHH---------HHHHHHHHHHhcCCCCCEEEEEeccHHHHhh--HHHHHHHHHHcCCCEEEe---
Q ss_pred cCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHH------
Q 014320 206 YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLA------ 279 (427)
Q Consensus 206 ~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~------ 279 (427)
+-+..|+-..+.+.++++|+....= .++.+..+-+++..+.+
T Consensus 129 ----pDLP~ee~~~~~~~~~~~gi~~I~l----------------------------vaPtt~~~rl~~i~~~a~GFiY~ 176 (265)
T COG0159 129 ----PDLPPEESDELLKAAEKHGIDPIFL----------------------------VAPTTPDERLKKIAEAASGFIYY 176 (265)
T ss_pred ----CCCChHHHHHHHHHHHHcCCcEEEE----------------------------eCCCCCHHHHHHHHHhCCCcEEE
Q ss_pred ----HhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHH
Q 014320 280 ----EFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAA 355 (427)
Q Consensus 280 ----~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~ 355 (427)
.-+|.+...... ..+-++.++..- ++++..... ++++++.+.+++.
T Consensus 177 vs~~GvTG~~~~~~~~-~~~~v~~vr~~~--~~Pv~vGFG---------------------------Is~~e~~~~v~~~ 226 (265)
T COG0159 177 VSRMGVTGARNPVSAD-VKELVKRVRKYT--DVPVLVGFG---------------------------ISSPEQAAQVAEA 226 (265)
T ss_pred EecccccCCCcccchh-HHHHHHHHHHhc--CCCeEEecC---------------------------cCCHHHHHHHHHh
Q ss_pred HhcCCce
Q 014320 356 LATGILQ 362 (427)
Q Consensus 356 l~~G~~~ 362 (427)
.+|+++
T Consensus 227 -ADGVIV 232 (265)
T COG0159 227 -ADGVIV 232 (265)
T ss_pred -CCeEEE
No 303
>PRK07360 FO synthase subunit 2; Reviewed
Probab=33.59 E-value=4.6e+02 Score=25.52 Aligned_cols=123 Identities=15% Similarity=0.106 Sum_probs=68.4
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCCCccCC-HHHHHHHHHHHHHcCCcEEEecCChhh-----------HHHHHHHHH
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMIN-DELLIEGFKRCKSLGALAMVHAENGDA-----------VFEGQKRMI 249 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~-~~~l~~~~~~a~~~g~~v~~H~e~~~~-----------~~~~~~~l~ 249 (427)
++..+.+++.. ..|+..+.+. +.. .+... .+.+.++++..++.--.+++|+-+..+ .++..++|.
T Consensus 94 eeI~~~a~~a~-~~G~~~i~l~-~G~-~p~~~~~e~~~~~i~~ik~~~~~i~i~a~s~~ei~~~~~~~G~~~~e~l~~Lk 170 (371)
T PRK07360 94 AEILEKAAEAV-KRGATEVCIQ-GGL-HPAADSLEFYLEILEAIKEEFPDIHLHAFSPMEVYFAAREDGLSYEEVLKALK 170 (371)
T ss_pred HHHHHHHHHHH-hCCCCEEEEc-cCC-CCCCCcHHHHHHHHHHHHHhCCCcceeeCCHHHHHHHHhhcCCCHHHHHHHHH
Confidence 34444455544 6788877665 322 23333 677888888888743357777643322 244557788
Q ss_pred HcCCCCccc-cc---------ccCCHHHHHHHHHHHHHHHHhcCCC----EEEEcCCCH-HHHHHHHHHhhcC
Q 014320 250 ELGITGPEG-HA---------LSRPPLLEGEATTRAIRLAEFVNTP----LYVVHVMSM-DAMEEIAKARKAG 307 (427)
Q Consensus 250 ~~G~~~~~~-~~---------~~~p~~~e~~a~~~~~~~~~~~g~~----~~i~H~~~~-~~~~~i~~~~~~G 307 (427)
+.|+..... .. ...|.........+.++.+++.|.+ ..+.|..+. +-++.+..+++.+
T Consensus 171 eAGld~~~~t~~e~l~~~vr~~i~p~~~s~~~~l~~i~~a~~~Gl~~~sg~i~G~gEt~edrv~~l~~lr~l~ 243 (371)
T PRK07360 171 DAGLDSMPGTAAEILVDEVRRIICPEKIKTAEWIEIVKTAHKLGLPTTSTMMYGHVETPEHRIDHLLILREIQ 243 (371)
T ss_pred HcCCCcCCCcchhhccHHHHHhhCCCCCCHHHHHHHHHHHHHcCCCceeeEEeeCCCCHHHHHHHHHHHHHhc
Confidence 899865531 11 0134322223335667777777654 455666554 3455566666544
No 304
>PRK08185 hypothetical protein; Provisional
Probab=33.22 E-value=2.6e+02 Score=26.17 Aligned_cols=24 Identities=13% Similarity=0.108 Sum_probs=21.6
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEec
Q 014320 212 INDELLIEGFKRCKSLGALAMVHA 235 (427)
Q Consensus 212 ~~~~~l~~~~~~a~~~g~~v~~H~ 235 (427)
.+.+.++.+++.|++.+.|+.+-.
T Consensus 21 ~n~e~~~avi~AAee~~sPvIl~~ 44 (283)
T PRK08185 21 ADSCFLRAVVEEAEANNAPAIIAI 44 (283)
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEe
Confidence 588999999999999999998864
No 305
>PF04476 DUF556: Protein of unknown function (DUF556); InterPro: IPR007565 The proteins in this entry are functionally uncharacterised.
Probab=33.18 E-value=3.7e+02 Score=24.31 Aligned_cols=94 Identities=16% Similarity=0.061 Sum_probs=45.8
Q ss_pred HHHHHcCCceEEecCcCCCCC----cHHHHHHHHHHHhccccceeceecc-ccCCChhhHHHHHHHHHHcCCCeEEEEEe
Q 014320 131 QAAALAGGTTMHIDFVIPING----SLTAGFEAYEKKAKNSCMDYGFHMA-ITKWDEVVSDEMEVMVKEKGINSFKFFMA 205 (427)
Q Consensus 131 ~~~~l~~GvTtv~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~g~~~ik~~~~ 205 (427)
+..++.+| .-++|.-.|... .....++...+.... ...+....+ ....+........... ..|++.+|+.+.
T Consensus 13 A~~a~~~g-aDiID~K~P~~GaLGA~~~~vi~~i~~~~~~-~~pvSAtiGDlp~~p~~~~~aa~~~a-~~GvdyvKvGl~ 89 (235)
T PF04476_consen 13 AEEALAGG-ADIIDLKNPAEGALGALFPWVIREIVAAVPG-RKPVSATIGDLPMKPGTASLAALGAA-ATGVDYVKVGLF 89 (235)
T ss_pred HHHHHhCC-CCEEEccCCCCCCCCCCCHHHHHHHHHHcCC-CCceEEEecCCCCCchHHHHHHHHHH-hcCCCEEEEecC
Confidence 56678888 557787666543 234444544444321 112222211 1212222222233333 579999999775
Q ss_pred cCCCccCCHHHHHHHHHHHHHc
Q 014320 206 YKGSFMINDELLIEGFKRCKSL 227 (427)
Q Consensus 206 ~~~~~~~~~~~l~~~~~~a~~~ 227 (427)
.........+.++.+.+..++.
T Consensus 90 g~~~~~~a~e~l~~v~~av~~~ 111 (235)
T PF04476_consen 90 GCKDYDEAIEALEAVVRAVKDF 111 (235)
T ss_pred CCCCHHHHHHHHHHHHHHHhhh
Confidence 4333222345556665555544
No 306
>cd08210 RLP_RrRLP Ribulose bisphosphate carboxylase like proteins (RLPs) similar to R.rubrum RLP. RLP from Rhodospirillum rubrum plays a role in an uncharacterized sulfur salvage pathway and has been shown to catalyze a novel isomerization reaction that converts 5-methylthio-d-ribulose 1-phosphate to a 3:1 mixture of 1-methylthioxylulose 5-phosphate and 1-methylthioribulose 5-phosphate.
Probab=33.13 E-value=4.4e+02 Score=25.65 Aligned_cols=105 Identities=10% Similarity=0.009 Sum_probs=53.5
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcCCCCC---cHHHHHHHHHHHhcccc----ceeceeccccCCChhhHHHHHHHHHH
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKNSC----MDYGFHMAITKWDEVVSDEMEVMVKE 194 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~ 194 (427)
.+++.+.......+.+|+-.+-|-....+. ...+.++...+...+.. -...+....+...++..+..+... +
T Consensus 138 L~~~~~a~~~~~~~~gGvD~IKdDe~l~~~~~~p~~eRv~~v~~av~~a~~eTG~~~~y~~Nita~~~em~~ra~~a~-~ 216 (364)
T cd08210 138 LSAAELAELAYAFALGGIDIIKDDHGLADQPFAPFEERVKACQEAVAEANAETGGRTLYAPNVTGPPTQLLERARFAK-E 216 (364)
T ss_pred CCHHHHHHHHHHHHhcCCCeeecCccccCccCCCHHHHHHHHHHHHHHHHhhcCCcceEEEecCCCHHHHHHHHHHHH-H
Confidence 467778777888899999999876543322 33444333333221111 111111222222334444444444 6
Q ss_pred cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcC-CcEEEec
Q 014320 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLG-ALAMVHA 235 (427)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g-~~v~~H~ 235 (427)
.|++.+-+..- ...-..++.+ +++.+ ++++.|.
T Consensus 217 ~Ga~~vMv~~~-----~~G~~~~~~l---~~~~~~l~i~aHr 250 (364)
T cd08210 217 AGAGGVLIAPG-----LTGLDTFREL---AEDFDFLPILAHP 250 (364)
T ss_pred cCCCEEEeecc-----cchHHHHHHH---HhcCCCcEEEEcc
Confidence 88876644321 1122234444 44567 8889994
No 307
>PRK08195 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase,; Validated
Probab=32.97 E-value=4.5e+02 Score=25.24 Aligned_cols=103 Identities=9% Similarity=-0.030 Sum_probs=54.6
Q ss_pred HHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecCCC
Q 014320 131 QAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGS 209 (427)
Q Consensus 131 ~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~ 209 (427)
.+.+...|+..++-....... ...+.++..++.+... .+.+... ...+.+.+.++.+.+...|++.|-+ .+..|
T Consensus 94 l~~a~~~gvd~iri~~~~~e~~~~~~~i~~ak~~G~~v--~~~l~~a-~~~~~e~l~~~a~~~~~~Ga~~i~i-~DT~G- 168 (337)
T PRK08195 94 LKMAYDAGVRVVRVATHCTEADVSEQHIGLARELGMDT--VGFLMMS-HMAPPEKLAEQAKLMESYGAQCVYV-VDSAG- 168 (337)
T ss_pred HHHHHHcCCCEEEEEEecchHHHHHHHHHHHHHCCCeE--EEEEEec-cCCCHHHHHHHHHHHHhCCCCEEEe-CCCCC-
Confidence 566788899987743211111 2333444444443221 1111111 2233444444444443678887633 22222
Q ss_pred ccCCHHHHHHHHHHHHHc---CCcEEEecCChh
Q 014320 210 FMINDELLIEGFKRCKSL---GALAMVHAENGD 239 (427)
Q Consensus 210 ~~~~~~~l~~~~~~a~~~---g~~v~~H~e~~~ 239 (427)
...++.+.++++..++. ++++.+|+.++-
T Consensus 169 -~~~P~~v~~~v~~l~~~l~~~i~ig~H~Hnnl 200 (337)
T PRK08195 169 -ALLPEDVRDRVRALRAALKPDTQVGFHGHNNL 200 (337)
T ss_pred -CCCHHHHHHHHHHHHHhcCCCCeEEEEeCCCc
Confidence 35788888888888764 688989986654
No 308
>PRK05692 hydroxymethylglutaryl-CoA lyase; Provisional
Probab=32.10 E-value=4.3e+02 Score=24.71 Aligned_cols=55 Identities=4% Similarity=-0.185 Sum_probs=32.8
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc-C-CcEEEecCChh
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-G-ALAMVHAENGD 239 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~-g-~~v~~H~e~~~ 239 (427)
.+.+.++.+.+.+.|++.|.+. +.. ...++..+.++++..++. + +++.+|+.++.
T Consensus 154 ~~~~~~~~~~~~~~G~d~i~l~-DT~--G~~~P~~v~~lv~~l~~~~~~~~i~~H~Hn~~ 210 (287)
T PRK05692 154 PEAVADVAERLFALGCYEISLG-DTI--GVGTPGQVRAVLEAVLAEFPAERLAGHFHDTY 210 (287)
T ss_pred HHHHHHHHHHHHHcCCcEEEec-ccc--CccCHHHHHHHHHHHHHhCCCCeEEEEecCCC
Confidence 3334343333336888876432 222 234778888888777653 4 78888987764
No 309
>PRK05927 hypothetical protein; Provisional
Probab=32.06 E-value=4.8e+02 Score=25.24 Aligned_cols=121 Identities=13% Similarity=0.083 Sum_probs=64.2
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHH-----------HHHHHHHH
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVF-----------EGQKRMIE 250 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~-----------~~~~~l~~ 250 (427)
++..+.+++.. ..|+..+-+ .+... +..+.+.+.++++..++.--.+++|+-+..++. +..++|.+
T Consensus 79 eei~~~a~~~~-~~G~~~i~i-~gG~~-p~~~~e~~~~~i~~ik~~~p~l~~~~~s~~ei~~~~~~~G~~~~e~l~~Lk~ 155 (350)
T PRK05927 79 DEFRSLMQRYV-SAGVKTVLL-QGGVH-PQLGIDYLEELVRITVKEFPSLHPHFFSAVEIAHAAQVSGISTEQALERLWD 155 (350)
T ss_pred HHHHHHHHHHH-HCCCCEEEE-eCCCC-CCCCHHHHHHHHHHHHHHCCCCcccCCCHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 44455555554 578877654 33332 446788888998888864224777776655543 33356888
Q ss_pred cCCCCccc-c---------cccCCHHHHHHHHHHHHHHHHhcCC----CEEEEcCCCHH-HHHHHHHHhh
Q 014320 251 LGITGPEG-H---------ALSRPPLLEGEATTRAIRLAEFVNT----PLYVVHVMSMD-AMEEIAKARK 305 (427)
Q Consensus 251 ~G~~~~~~-~---------~~~~p~~~e~~a~~~~~~~~~~~g~----~~~i~H~~~~~-~~~~i~~~~~ 305 (427)
.|+....+ . -...|.....+.=.+.++.+++.|. -..+.|..+.+ -++.+..+|+
T Consensus 156 aGl~~l~g~~~Et~~~~~~~~~~p~k~~~~~rl~~i~~A~~lGi~~~sg~l~G~gEt~e~ri~~l~~Lr~ 225 (350)
T PRK05927 156 AGQRTIPGGGAEILSERVRKIISPKKMGPDGWIQFHKLAHRLGFRSTATMMFGHVESPEDILLHLQTLRD 225 (350)
T ss_pred cCcccCCCCCchhCCHHHhhccCCCCCCHHHHHHHHHHHHHcCCCcCceeEEeeCCCHHHHHHHHHHHHH
Confidence 88842221 0 0112222111222344555555554 46677776643 2344444443
No 310
>TIGR02631 xylA_Arthro xylose isomerase, Arthrobacter type. This model describes a D-xylose isomerase that is also active as a D-glucose isomerase. It is tetrameric and dependent on a divalent cation Mg2+, Co2+ or Mn2+ as characterized in Arthrobacter. Members of this family differ substantially from the D-xylose isomerases of family TIGR02630.
Probab=31.98 E-value=5e+02 Score=25.45 Aligned_cols=98 Identities=15% Similarity=0.050 Sum_probs=48.4
Q ss_pred hhHHHHHHHHHHcCCCeEEEEEecCCCccCC----HHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCccc
Q 014320 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMIN----DELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEG 258 (427)
Q Consensus 183 ~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~----~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~ 258 (427)
+..+.++++. +.|.++|.+.-...-+...+ ...++++.+..+++|+.+....-+.-.- ..+...++.++
T Consensus 33 ~~~e~i~~la-~~GfdgVE~~~~dl~P~~~~~~e~~~~~~~lk~~L~~~GL~v~~v~~nl~~~----~~~~~g~las~-- 105 (382)
T TIGR02631 33 DPVEAVHKLA-ELGAYGVTFHDDDLIPFGAPPQERDQIVRRFKKALDETGLKVPMVTTNLFSH----PVFKDGGFTSN-- 105 (382)
T ss_pred CHHHHHHHHH-HhCCCEEEecccccCCCCCChhHHHHHHHHHHHHHHHhCCeEEEeeccccCC----ccccCCCCCCC--
Confidence 3345556665 78888886542110111122 2235677778888999877654221000 00000011110
Q ss_pred ccccCCH--HHHHHHHHHHHHHHHhcCCCEEEEcC
Q 014320 259 HALSRPP--LLEGEATTRAIRLAEFVNTPLYVVHV 291 (427)
Q Consensus 259 ~~~~~p~--~~e~~a~~~~~~~~~~~g~~~~i~H~ 291 (427)
-+. .......++.++++.+.|++....|.
T Consensus 106 ----d~~vR~~ai~~~kraId~A~eLGa~~v~v~~ 136 (382)
T TIGR02631 106 ----DRSVRRYALRKVLRNMDLGAELGAETYVVWG 136 (382)
T ss_pred ----CHHHHHHHHHHHHHHHHHHHHhCCCEEEEcc
Confidence 111 12234457778888888887555554
No 311
>COG2108 Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme [General function prediction only]
Probab=31.96 E-value=3.2e+02 Score=26.04 Aligned_cols=71 Identities=21% Similarity=0.161 Sum_probs=46.8
Q ss_pred HHHHHHHHHHH-HcCCcEEEecCC--hhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCE
Q 014320 215 ELLIEGFKRCK-SLGALAMVHAEN--GDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPL 286 (427)
Q Consensus 215 ~~l~~~~~~a~-~~g~~v~~H~e~--~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~ 286 (427)
+.....++..+ +.|-.+|+|.-+ ....++..+.|.+.|++..+.|+. +|..-..+-..+.+..+++.|..+
T Consensus 94 eR~~~~ir~LK~efG~~fHiHLYT~g~~~~~e~l~~L~eAGLDEIRfHp~-~~~~~~~e~~i~~l~~A~~~g~dv 167 (353)
T COG2108 94 ERTVEYIRLLKDEFGEDFHIHLYTTGILATEEALKALAEAGLDEIRFHPP-RPGSKSSEKYIENLKIAKKYGMDV 167 (353)
T ss_pred HHHHHHHHHHHHhhccceeEEEeeccccCCHHHHHHHHhCCCCeEEecCC-CccccccHHHHHHHHHHHHhCccc
Confidence 33344444443 468889999743 445566778899999999999986 555544455556666666666543
No 312
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=31.82 E-value=2.2e+02 Score=26.48 Aligned_cols=111 Identities=11% Similarity=-0.028 Sum_probs=55.8
Q ss_pred ChhhHHHHHHHHHcCCceEEe-cCcCCC--------------CCcHHHHHHHHHHHhccccceeceec--cccCCChhhH
Q 014320 123 TIDDFFSGQAAALAGGTTMHI-DFVIPI--------------NGSLTAGFEAYEKKAKNSCMDYGFHM--AITKWDEVVS 185 (427)
Q Consensus 123 ~~e~~~~~~~~~l~~GvTtv~-d~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 185 (427)
+-+....-...|.+.|+-.++ |.+... ...+.+.++..++.+-...+=..... ........ +
T Consensus 30 ~t~~~k~yIDfAa~~G~eYvlvD~GW~~~~~~~~~d~~~~~~~~dl~elv~Ya~~KgVgi~lw~~~~~~~~~~~~~~~-~ 108 (273)
T PF10566_consen 30 TTETQKRYIDFAAEMGIEYVLVDAGWYGWEKDDDFDFTKPIPDFDLPELVDYAKEKGVGIWLWYHSETGGNVANLEKQ-L 108 (273)
T ss_dssp SHHHHHHHHHHHHHTT-SEEEEBTTCCGS--TTT--TT-B-TT--HHHHHHHHHHTT-EEEEEEECCHTTBHHHHHCC-H
T ss_pred CHHHHHHHHHHHHHcCCCEEEeccccccccccccccccccCCccCHHHHHHHHHHcCCCEEEEEeCCcchhhHhHHHH-H
Confidence 445555556678888988765 554421 11455555555554422111111100 00001111 2
Q ss_pred HHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec
Q 014320 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA 235 (427)
Q Consensus 186 ~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~ 235 (427)
++.-...++.|+.+||+-.-.+ ..+..-..++++++.|.++.+.|..|-
T Consensus 109 ~~~f~~~~~~Gv~GvKidF~~~-d~Q~~v~~y~~i~~~AA~~~LmvnfHg 157 (273)
T PF10566_consen 109 DEAFKLYAKWGVKGVKIDFMDR-DDQEMVNWYEDILEDAAEYKLMVNFHG 157 (273)
T ss_dssp HHHHHHHHHCTEEEEEEE--SS-TSHHHHHHHHHHHHHHHHTT-EEEETT
T ss_pred HHHHHHHHHcCCCEEeeCcCCC-CCHHHHHHHHHHHHHHHHcCcEEEecC
Confidence 3333334479999999833222 111123567789999999999999993
No 313
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.
Probab=31.73 E-value=4.3e+02 Score=24.58 Aligned_cols=109 Identities=10% Similarity=-0.067 Sum_probs=57.1
Q ss_pred CCCChhhHHHHHHHHHcC-CceEEecCcCCCCC---cHHH---HHHHHHHHhccccceeceeccccC-CChhhHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAG-GTTMHIDFVIPING---SLTA---GFEAYEKKAKNSCMDYGFHMAITK-WDEVVSDEMEVM 191 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~-GvTtv~d~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l 191 (427)
|..+.+.+....+..+.. |+..+.-.+..+.. +..+ .++...+... ..+.+ ..+... ..++..+..+..
T Consensus 16 g~iD~~~~~~~i~~l~~~~Gv~gi~~~GstGE~~~Lt~~Er~~~~~~~~~~~~-~~~~v--iagv~~~~~~~ai~~a~~a 92 (288)
T cd00954 16 GEINEDVLRAIVDYLIEKQGVDGLYVNGSTGEGFLLSVEERKQIAEIVAEAAK-GKVTL--IAHVGSLNLKESQELAKHA 92 (288)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhC-CCCeE--EeccCCCCHHHHHHHHHHH
Confidence 456677777778888899 99998876544322 2222 2222222211 11111 112222 233444434443
Q ss_pred HHHcCCCeEEEEEecCCCccCCHHHHHH-HHHHHHHc-CCcEEEe
Q 014320 192 VKEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSL-GALAMVH 234 (427)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~a~~~-g~~v~~H 234 (427)
++.|++.+-+.. |. ....+++.+.+ ..+.++.. ++++.+.
T Consensus 93 -~~~Gad~v~~~~-P~-y~~~~~~~i~~~~~~v~~a~~~lpi~iY 134 (288)
T cd00954 93 -EELGYDAISAIT-PF-YYKFSFEEIKDYYREIIAAAASLPMIIY 134 (288)
T ss_pred -HHcCCCEEEEeC-CC-CCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 378998875432 22 22245555555 44455667 8898886
No 314
>PLN02858 fructose-bisphosphate aldolase
Probab=31.61 E-value=5.6e+02 Score=30.03 Aligned_cols=51 Identities=22% Similarity=0.324 Sum_probs=36.1
Q ss_pred HHHHHHHHHHcCCCeEEEEEec-CCC-----ccCCHHHHHHHHHHHHHcCCcEEEec
Q 014320 185 SDEMEVMVKEKGINSFKFFMAY-KGS-----FMINDELLIEGFKRCKSLGALAMVHA 235 (427)
Q Consensus 185 ~~~~~~l~~~~g~~~ik~~~~~-~~~-----~~~~~~~l~~~~~~a~~~g~~v~~H~ 235 (427)
.++..+++++-|++.+-+.++. ||. +.++.+.|+++-+...+.++|+..|-
T Consensus 1252 p~~a~~Fv~~TgvD~LAvaiGt~HG~Y~~~~p~l~~~~l~~i~~~~~~~~vpLVlHG 1308 (1378)
T PLN02858 1252 VDQAKEFIDETGIDALAVCIGNVHGKYPASGPNLRLDLLKELRALSSKKGVLLVLHG 1308 (1378)
T ss_pred HHHHHHHHHhcCCcEEeeecccccccCCCCCCccCHHHHHHHHHHhcCCCCcEEEeC
Confidence 3566777766789888766542 332 45677788888777666689999995
No 315
>COG1456 CdhE CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein) [Energy production and conversion]
Probab=31.61 E-value=4.4e+02 Score=25.47 Aligned_cols=89 Identities=13% Similarity=0.134 Sum_probs=51.1
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcC
Q 014320 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (427)
Q Consensus 212 ~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~ 291 (427)
-+++.+.++++.+.+.++++..-.-+++-+...++.+.+ ..|-.+.++ .+-..+.++++-+.++++.+...
T Consensus 143 gdpekfa~ave~v~~~~~pv~l~s~dpevmkaaLev~~d---qkPllYaAt------e~n~~e~~klav~y~vplvl~a~ 213 (467)
T COG1456 143 GDPEKFAEAVEKVAEAGLPVILCSFDPEVMKAALEVVKD---QKPLLYAAT------EDNWKEFAKLAVEYKVPLVLSAF 213 (467)
T ss_pred CCHHHHHHHHHHHHhcCCcEEEEeCCHHHHHHHHHHhhc---cCceeeecc------cccHHHHHHHHhhcCCcEEEecc
Confidence 367788888888888888877776776665554443322 112222211 23345566777778888755543
Q ss_pred CCHHHHH-HHHHHhhcCCC
Q 014320 292 MSMDAME-EIAKARKAGQR 309 (427)
Q Consensus 292 ~~~~~~~-~i~~~~~~G~~ 309 (427)
...+.+. +...+++.|+.
T Consensus 214 ~dl~~lk~la~~~~~~Gi~ 232 (467)
T COG1456 214 NDLDDLKNLAVTYAQAGIK 232 (467)
T ss_pred CCHHHHHHHHHHHHHcCCc
Confidence 4444333 33445667764
No 316
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=31.38 E-value=4.4e+02 Score=24.60 Aligned_cols=110 Identities=8% Similarity=-0.109 Sum_probs=56.1
Q ss_pred CCCChhhHHHHHHHHHcCC-ceEEecCcCCCCC---cHHH---HHHHHHHHhccccceeceeccccCCChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGG-TTMHIDFVIPING---SLTA---GFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~G-vTtv~d~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 192 (427)
+..+.+.+....+..+..| +..+.-.+..+.. +..+ .++...+... ..+.+-...+. ...++.++..+..
T Consensus 16 g~iD~~~~~~~i~~~i~~G~v~gi~~~GstGE~~~Lt~eEr~~~~~~~~~~~~-~~~pvi~gv~~-~~t~~~i~la~~a- 92 (290)
T TIGR00683 16 GTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAK-DQIALIAQVGS-VNLKEAVELGKYA- 92 (290)
T ss_pred CCcCHHHHHHHHHHHHhCCCcCEEEECCcccccccCCHHHHHHHHHHHHHHhC-CCCcEEEecCC-CCHHHHHHHHHHH-
Confidence 4456677777777888899 9998876544332 2222 2222222221 11222111111 1233444444443
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHHHHHH-HHHc-CCcEEEe
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKR-CKSL-GALAMVH 234 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~-a~~~-g~~v~~H 234 (427)
++.|++.+-+.. |. ....+++.+..-++. +... ++++.+-
T Consensus 93 ~~~Gad~v~v~~-P~-y~~~~~~~i~~yf~~v~~~~~~lpv~lY 134 (290)
T TIGR00683 93 TELGYDCLSAVT-PF-YYKFSFPEIKHYYDTIIAETGGLNMIVY 134 (290)
T ss_pred HHhCCCEEEEeC-Cc-CCCCCHHHHHHHHHHHHhhCCCCCEEEE
Confidence 378999876633 22 223456665554444 4555 6888765
No 317
>PTZ00310 AMP deaminase; Provisional
Probab=31.21 E-value=1.5e+02 Score=34.16 Aligned_cols=18 Identities=17% Similarity=0.056 Sum_probs=15.9
Q ss_pred HHHHHhcCCceEEecCCC
Q 014320 352 LQAALATGILQLVGTDHC 369 (427)
Q Consensus 352 l~~~l~~G~~~~lgSD~~ 369 (427)
+.++++.|+.++|.||..
T Consensus 548 i~~fl~~GL~VSLNTDDP 565 (1453)
T PTZ00310 548 LPKFLHRCLRVSISTSDP 565 (1453)
T ss_pred HHHHHHCCCEEEECCCCc
Confidence 677999999999999964
No 318
>cd07938 DRE_TIM_HMGL 3-hydroxy-3-methylglutaryl-CoA lyase, catalytic TIM barrel domain. 3-hydroxy-3-methylglutaryl-CoA lyase (HMGL) catalyzes the cleavage of HMG-CoA to acetyl-CoA and acetoacetate, one of the terminal steps in ketone body generation and leucine degradation, and is a key enzyme in the pathway that supplies metabolic fuel to extrahepatic tissues. Mutations in HMGL cause a human autosomal recessive disorder called primary metabolic aciduria that affects ketogenesis and leucine catabolism and can be fatal due to an inability to tolerate hypoglycemia. HMGL has a TIM barrel domain with a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. The cleavage of HMG-CoA requires the presence of a divalent cation like Mg2+ or Mn2+, and the reaction is thought to involve general acid/base catalysis. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropy
Probab=31.17 E-value=4.3e+02 Score=24.46 Aligned_cols=54 Identities=6% Similarity=-0.067 Sum_probs=33.5
Q ss_pred hhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc--CCcEEEecCChh
Q 014320 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL--GALAMVHAENGD 239 (427)
Q Consensus 183 ~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~--g~~v~~H~e~~~ 239 (427)
+.+.++.+.+.+.|++.|.+. +.. ...++..+.++++..++. ++++.+|+.++.
T Consensus 149 ~~~~~~~~~~~~~Ga~~i~l~-DT~--G~~~P~~v~~lv~~l~~~~~~~~i~~H~Hnd~ 204 (274)
T cd07938 149 ERVAEVAERLLDLGCDEISLG-DTI--GVATPAQVRRLLEAVLERFPDEKLALHFHDTR 204 (274)
T ss_pred HHHHHHHHHHHHcCCCEEEEC-CCC--CccCHHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 333343333336788876442 222 235788888888877664 488999987764
No 319
>PRK09234 fbiC FO synthase; Reviewed
Probab=30.88 E-value=4.2e+02 Score=29.16 Aligned_cols=128 Identities=10% Similarity=0.038 Sum_probs=67.0
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcCCCCC----cHHHHHHHHHHHhccccceeceecc--c----cCCChhhHHHHHHH
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING----SLTAGFEAYEKKAKNSCMDYGFHMA--I----TKWDEVVSDEMEVM 191 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~l 191 (427)
.+.+.+...++.+...|+|.++-.++..+. ...+.++..++..+. +.+..+.+ + ....-...+.+.++
T Consensus 557 Ls~eeI~~~a~ea~~~G~tev~i~gG~~p~~~~~~y~~lir~IK~~~p~--i~i~afsp~Ei~~~a~~~Gl~~~e~l~~L 634 (843)
T PRK09234 557 LSLDEVADRAWEAWVAGATEVCMQGGIHPELPGTGYADLVRAVKARVPS--MHVHAFSPMEIVNGAARLGLSIREWLTAL 634 (843)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCCCCcCHHHHHHHHHHHHHhCCC--eeEEecChHHHHHHHHHcCCCHHHHHHHH
Confidence 356677777888899999999865433222 223344444443322 22111100 0 00000112334444
Q ss_pred HHHcCCCeEEE----EEec-----CCCccCCHHHHHHHHHHHHHcCCcE-----EEecCChhhHHHHHHHHHHcC
Q 014320 192 VKEKGINSFKF----FMAY-----KGSFMINDELLIEGFKRCKSLGALA-----MVHAENGDAVFEGQKRMIELG 252 (427)
Q Consensus 192 ~~~~g~~~ik~----~~~~-----~~~~~~~~~~l~~~~~~a~~~g~~v-----~~H~e~~~~~~~~~~~l~~~G 252 (427)
. +.|.+.+-. +++. -.+..++.+...++++.|++.|+++ ..|.|+.+....-...+.++.
T Consensus 635 k-eAGLds~pgt~aeil~d~vr~~i~p~k~~~~~wle~i~~Ah~lGi~~~stmm~G~~Et~edrv~hl~~LreLq 708 (843)
T PRK09234 635 R-EAGLDTIPGTAAEILDDEVRWVLTKGKLPTAEWIEVVTTAHEVGLRSSSTMMYGHVDTPRHWVAHLRVLRDIQ 708 (843)
T ss_pred H-HhCcCccCCCchhhCCHHHHhhcCCCCCCHHHHHHHHHHHHHcCCCcccceEEcCCCCHHHHHHHHHHHHhcC
Confidence 4 667765521 1111 0112446677789999999999865 457777766555555555554
No 320
>PF07287 DUF1446: Protein of unknown function (DUF1446); InterPro: IPR010839 This family consists of several bacterial and plant proteins of around 400 residues in length. The function of this family is unknown.
Probab=30.50 E-value=5.2e+02 Score=25.17 Aligned_cols=66 Identities=15% Similarity=0.103 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCH
Q 014320 215 ELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM 294 (427)
Q Consensus 215 ~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~ 294 (427)
+.|+.++..+++.|+++.+-+-.... ........+++++.|.++.+..+...
T Consensus 58 ~~L~~~L~~~~~~gIkvI~NaGg~np----------------------------~~~a~~v~eia~e~Gl~lkvA~V~gD 109 (362)
T PF07287_consen 58 RDLRPLLPAAAEKGIKVITNAGGLNP----------------------------AGCADIVREIARELGLSLKVAVVYGD 109 (362)
T ss_pred HHHHHHHHHHHhCCCCEEEeCCCCCH----------------------------HHHHHHHHHHHHhcCCCeeEEEEECc
Confidence 47888888999999998877532211 11334445666666666666666554
Q ss_pred HHHHHHHHHhhcCC
Q 014320 295 DAMEEIAKARKAGQ 308 (427)
Q Consensus 295 ~~~~~i~~~~~~G~ 308 (427)
+..+.+++..+.|.
T Consensus 110 d~~~~v~~~~~~g~ 123 (362)
T PF07287_consen 110 DLKDEVKELLAEGE 123 (362)
T ss_pred cchHhHHHHHhCCC
Confidence 44566666665664
No 321
>PRK08444 hypothetical protein; Provisional
Probab=30.40 E-value=5.1e+02 Score=25.07 Aligned_cols=127 Identities=15% Similarity=0.122 Sum_probs=65.3
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcCCCCC----cHHHHHHHHHHHhccccceeceeccc-----c-CCChhhHHHHHHH
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING----SLTAGFEAYEKKAKNSCMDYGFHMAI-----T-KWDEVVSDEMEVM 191 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~l 191 (427)
.+.|.+...++.+...|+|.+.=.++..+. ...+.++..++..+. +.+...... . ...-...+.+.++
T Consensus 80 ls~eeI~~~a~~a~~~G~~ei~iv~G~~p~~~~e~y~e~ir~Ik~~~p~--i~i~a~s~~Ei~~~a~~~g~~~~e~l~~L 157 (353)
T PRK08444 80 MSHEEILEIVKNSVKRGIKEVHIVSAHNPNYGYEWYLEIFKKIKEAYPN--LHVKAMTAAEVDFLSRKFGKSYEEVLEDM 157 (353)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeccCCCCCCHHHHHHHHHHHHHHCCC--ceEeeCCHHHHHHHHHHcCCCHHHHHHHH
Confidence 467788888888899999998855432222 223444444432221 222210000 0 0000112334444
Q ss_pred HHHcCCCeEEE----EEec-----CCCccCCHHHHHHHHHHHHHcCCcE-----EEecCChhhHHHHHHHHHHc
Q 014320 192 VKEKGINSFKF----FMAY-----KGSFMINDELLIEGFKRCKSLGALA-----MVHAENGDAVFEGQKRMIEL 251 (427)
Q Consensus 192 ~~~~g~~~ik~----~~~~-----~~~~~~~~~~l~~~~~~a~~~g~~v-----~~H~e~~~~~~~~~~~l~~~ 251 (427)
. +.|.+.+-- ++++ -.+...+.+.+..+.+.|++.|+++ ..|.|+.+...+-...+.++
T Consensus 158 k-eAGl~~~~g~~aEi~~~~vr~~I~p~k~~~~~~~~i~~~a~~~Gi~~~sg~l~G~gEt~edrv~hl~~Lr~L 230 (353)
T PRK08444 158 L-EYGVDSMPGGGAEIFDEEVRKKICKGKVSSERWLEIHKYWHKKGKMSNATMLFGHIENREHRIDHMLRLRDL 230 (353)
T ss_pred H-HhCcccCCCCCchhcCHHHHhhhCCCCCCHHHHHHHHHHHHHcCCCccceeEEecCCCHHHHHHHHHHHHHh
Confidence 4 567654311 0000 0122356788999999999999865 56777776554444344433
No 322
>PRK07807 inosine 5-monophosphate dehydrogenase; Validated
Probab=30.25 E-value=4.6e+02 Score=26.62 Aligned_cols=98 Identities=14% Similarity=0.072 Sum_probs=54.4
Q ss_pred HHHHHHHHcCCceEEe-cCcCCCCCcHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEec
Q 014320 128 FSGQAAALAGGTTMHI-DFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAY 206 (427)
Q Consensus 128 ~~~~~~~l~~GvTtv~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~ 206 (427)
.......+..|+..+. |..........+.++..++..+... +..+.. ...+..+.+. +.|++.+|+.+++
T Consensus 229 ~~~a~~Lv~aGvd~i~~D~a~~~~~~~~~~i~~ik~~~p~~~----v~agnv----~t~~~a~~l~-~aGad~v~vgig~ 299 (479)
T PRK07807 229 AAKARALLEAGVDVLVVDTAHGHQEKMLEALRAVRALDPGVP----IVAGNV----VTAEGTRDLV-EAGADIVKVGVGP 299 (479)
T ss_pred HHHHHHHHHhCCCEEEEeccCCccHHHHHHHHHHHHHCCCCe----EEeecc----CCHHHHHHHH-HcCCCEEEECccC
Confidence 3445667788998875 6543322245566666665433221 111111 1234566666 7899999988776
Q ss_pred CCC---------ccCCHHHHHHHHHHHHHcCCcEEEe
Q 014320 207 KGS---------FMINDELLIEGFKRCKSLGALAMVH 234 (427)
Q Consensus 207 ~~~---------~~~~~~~l~~~~~~a~~~g~~v~~H 234 (427)
... ....-..+.++.+.|+++++++..-
T Consensus 300 gsictt~~~~~~~~p~~~av~~~~~~~~~~~~~via~ 336 (479)
T PRK07807 300 GAMCTTRMMTGVGRPQFSAVLECAAAARELGAHVWAD 336 (479)
T ss_pred CcccccccccCCchhHHHHHHHHHHHHHhcCCcEEec
Confidence 211 1112345556666666888876653
No 323
>PLN02417 dihydrodipicolinate synthase
Probab=30.18 E-value=4.5e+02 Score=24.36 Aligned_cols=108 Identities=12% Similarity=-0.015 Sum_probs=56.5
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHHHHH---HHHHHHhccccceeceeccccC-CChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGF---EAYEKKAKNSCMDYGFHMAITK-WDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ 192 (427)
|..+.+.+....+..+..|+..+.-.+..+.. +..+.. +...+... ..+.+ ..+... ...+.++..+...
T Consensus 17 g~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~ls~~Er~~~~~~~~~~~~-~~~pv--i~gv~~~~t~~~i~~a~~a~ 93 (280)
T PLN02417 17 GRFDLEAYDSLVNMQIENGAEGLIVGGTTGEGQLMSWDEHIMLIGHTVNCFG-GKIKV--IGNTGSNSTREAIHATEQGF 93 (280)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccCcchhhCCHHHHHHHHHHHHHHhC-CCCcE--EEECCCccHHHHHHHHHHHH
Confidence 45567777777888899999999866544322 222222 22222211 11111 112222 2334444444443
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEe
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH 234 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H 234 (427)
+.|++.+-+.. +.....+++.+.+-++...+.. |+.+.
T Consensus 94 -~~Gadav~~~~--P~y~~~~~~~i~~~f~~va~~~-pi~lY 131 (280)
T PLN02417 94 -AVGMHAALHIN--PYYGKTSQEGLIKHFETVLDMG-PTIIY 131 (280)
T ss_pred -HcCCCEEEEcC--CccCCCCHHHHHHHHHHHHhhC-CEEEE
Confidence 78998775532 2223346777776666555556 88766
No 324
>COG2200 Rtn c-di-GMP phosphodiesterase class I (EAL domain) [Signal transduction mechanisms]
Probab=30.14 E-value=2.2e+02 Score=26.06 Aligned_cols=50 Identities=20% Similarity=0.267 Sum_probs=39.5
Q ss_pred CHHHHHHHHHHHHHcCCcEEEe-cCChhhHHHHHHHHHHcCCCCcccccccCCHH
Q 014320 213 NDELLIEGFKRCKSLGALAMVH-AENGDAVFEGQKRMIELGITGPEGHALSRPPL 266 (427)
Q Consensus 213 ~~~~l~~~~~~a~~~g~~v~~H-~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~ 266 (427)
+...++.+++.|++.|+.+.+- +|+.+.. +.+.+.|+.-..++...+|-.
T Consensus 191 ~~~iv~~iv~la~~l~~~vvaEGVEt~~ql----~~L~~~G~~~~QGylf~~P~~ 241 (256)
T COG2200 191 DQAIVRAIVALAHKLGLTVVAEGVETEEQL----DLLRELGCDYLQGYLFSRPLP 241 (256)
T ss_pred hHHHHHHHHHHHHHCCCEEEEeecCCHHHH----HHHHHcCCCeEeeccccCCCC
Confidence 4467899999999999999887 5776554 567888998888887777643
No 325
>PRK06806 fructose-bisphosphate aldolase; Provisional
Probab=29.11 E-value=4.8e+02 Score=24.34 Aligned_cols=110 Identities=15% Similarity=-0.025 Sum_probs=61.4
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHH-HHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccc
Q 014320 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLI-EGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (427)
Q Consensus 181 ~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~-~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~ 259 (427)
+-+..+.+-+..++.+...|- .+.+........+.+. -+...|++...||.+|.......+ ..+...+.|+.....=
T Consensus 27 n~e~~~avi~aAe~~~~Pvii-~~~~~~~~~~~~~~~~~~~~~~a~~~~vpv~lHlDH~~~~e-~i~~Al~~G~tsVm~d 104 (281)
T PRK06806 27 NMEMVMGAIKAAEELNSPIIL-QIAEVRLNHSPLHLIGPLMVAAAKQAKVPVAVHFDHGMTFE-KIKEALEIGFTSVMFD 104 (281)
T ss_pred CHHHHHHHHHHHHHhCCCEEE-EcCcchhccCChHHHHHHHHHHHHHCCCCEEEECCCCCCHH-HHHHHHHcCCCEEEEc
Confidence 444555555555455544432 1122111123344444 455677888999999985443333 3345567787655433
Q ss_pred cccCCHHHHHHHHHHHHHHHHhcCCCE--EEEcCC
Q 014320 260 ALSRPPLLEGEATTRAIRLAEFVNTPL--YVVHVM 292 (427)
Q Consensus 260 ~~~~p~~~e~~a~~~~~~~~~~~g~~~--~i~H~~ 292 (427)
....|..-......+..+++...|+++ .+.|+.
T Consensus 105 ~s~~~~~eni~~t~~v~~~a~~~gv~veaE~ghlG 139 (281)
T PRK06806 105 GSHLPLEENIQKTKEIVELAKQYGATVEAEIGRVG 139 (281)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeEC
Confidence 344555555666677888888888653 345664
No 326
>PRK11858 aksA trans-homoaconitate synthase; Reviewed
Probab=28.88 E-value=5.2e+02 Score=25.24 Aligned_cols=58 Identities=19% Similarity=0.182 Sum_probs=36.1
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHH-cCCcEEEecCChhhH
Q 014320 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS-LGALAMVHAENGDAV 241 (427)
Q Consensus 181 ~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~e~~~~~ 241 (427)
+.+.+.++.+.+.+.|++.|.+. +..| ..+++.+.++++..++ .++++.+|+.++...
T Consensus 143 ~~~~l~~~~~~~~~~Ga~~I~l~-DT~G--~~~P~~v~~lv~~l~~~~~~~l~~H~Hnd~Gl 201 (378)
T PRK11858 143 DLDFLIEFAKAAEEAGADRVRFC-DTVG--ILDPFTMYELVKELVEAVDIPIEVHCHNDFGM 201 (378)
T ss_pred CHHHHHHHHHHHHhCCCCEEEEe-ccCC--CCCHHHHHHHHHHHHHhcCCeEEEEecCCcCH
Confidence 33444444444446788876443 2222 3578888888877654 488899998776443
No 327
>COG5016 Pyruvate/oxaloacetate carboxyltransferase [Energy production and conversion]
Probab=28.87 E-value=5.8e+02 Score=25.24 Aligned_cols=178 Identities=20% Similarity=0.148 Sum_probs=93.1
Q ss_pred hhHHHHHHHHHcCCceEEecCcCCC--------CCcHHHHHHHHHHHhcccccee---ce-eccccCCChhhHHHHHHHH
Q 014320 125 DDFFSGQAAALAGGTTMHIDFVIPI--------NGSLTAGFEAYEKKAKNSCMDY---GF-HMAITKWDEVVSDEMEVMV 192 (427)
Q Consensus 125 e~~~~~~~~~l~~GvTtv~d~~~~~--------~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~l~ 192 (427)
+++.-.+..+=+.|++++--.++.. +.+-++.++.+++.-++..+.. |. ..+.....++..+...+..
T Consensus 28 ~DmlPi~e~lD~~G~~slE~WGGATFDaciRfLnEDPWeRLr~lk~~~~nT~LQMLlRGQNlvGYrhyaDDvVe~Fv~ka 107 (472)
T COG5016 28 EDMLPIAEALDKVGYWSLEVWGGATFDACIRFLNEDPWERLRELKKAVPNTKLQMLLRGQNLVGYRHYADDVVEKFVEKA 107 (472)
T ss_pred HhhHHHHHHHHhcCeeEEEecCCccHHHHHHHhcCCHHHHHHHHHHhCCCcHHHHHHccCccccccCCchHHHHHHHHHH
Confidence 3444445555678988876543211 1134556666666554432221 11 1122233455565555444
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEe-cCC------hhhHHHHHHHHHHcCCCCcc--c-cccc
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH-AEN------GDAVFEGQKRMIELGITGPE--G-HALS 262 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H-~e~------~~~~~~~~~~l~~~G~~~~~--~-~~~~ 262 (427)
-++|.+.|.+|=+- .+...++..++.++++|.-++.- +-+ -+......+.+.+.|+.+.. . -...
T Consensus 108 ~~nGidvfRiFDAl-----ND~RNl~~ai~a~kk~G~h~q~~i~YT~sPvHt~e~yv~~akel~~~g~DSIciKDmaGll 182 (472)
T COG5016 108 AENGIDVFRIFDAL-----NDVRNLKTAIKAAKKHGAHVQGTISYTTSPVHTLEYYVELAKELLEMGVDSICIKDMAGLL 182 (472)
T ss_pred HhcCCcEEEechhc-----cchhHHHHHHHHHHhcCceeEEEEEeccCCcccHHHHHHHHHHHHHcCCCEEEeecccccC
Confidence 47999999887432 36788999999999999844433 122 12223333567777775432 1 1112
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCCEE-EEcCCCHHHHHHHHHHhhcCCCEE
Q 014320 263 RPPLLEGEATTRAIRLAEFVNTPLY-VVHVMSMDAMEEIAKARKAGQRVI 311 (427)
Q Consensus 263 ~p~~~e~~a~~~~~~~~~~~g~~~~-i~H~~~~~~~~~i~~~~~~G~~v~ 311 (427)
-|. .+.+-.-.+-+..+.+++ .+|.++.-+....-.+.++|+...
T Consensus 183 tP~----~ayelVk~iK~~~~~pv~lHtH~TsG~a~m~ylkAvEAGvD~i 228 (472)
T COG5016 183 TPY----EAYELVKAIKKELPVPVELHTHATSGMAEMTYLKAVEAGVDGI 228 (472)
T ss_pred ChH----HHHHHHHHHHHhcCCeeEEecccccchHHHHHHHHHHhCcchh
Confidence 222 222222233344566543 467766544333444567787654
No 328
>COG0269 SgbH 3-hexulose-6-phosphate synthase and related proteins [Carbohydrate transport and metabolism]
Probab=28.85 E-value=4.2e+02 Score=23.62 Aligned_cols=52 Identities=19% Similarity=0.135 Sum_probs=36.4
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHc
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIEL 251 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~ 251 (427)
..|++.+.+... .+.+++..+++.|+++|+.+.+-..+........+.+++.
T Consensus 78 ~aGAd~~tV~g~------A~~~TI~~~i~~A~~~~~~v~iDl~~~~~~~~~~~~l~~~ 129 (217)
T COG0269 78 EAGADWVTVLGA------ADDATIKKAIKVAKEYGKEVQIDLIGVWDPEQRAKWLKEL 129 (217)
T ss_pred HcCCCEEEEEec------CCHHHHHHHHHHHHHcCCeEEEEeecCCCHHHHHHHHHHh
Confidence 789988766432 4789999999999999999998865544333333333333
No 329
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=28.81 E-value=5e+02 Score=24.43 Aligned_cols=110 Identities=10% Similarity=0.016 Sum_probs=59.3
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 192 (427)
|..+.+.+....+..+..||-.+.-.+..+.. +.. +.++...+.. .+.++-.+. + ...+++..+ +.+..
T Consensus 20 g~vD~~a~~~lv~~li~~Gv~gi~~~GttGE~~~Ls~eEr~~v~~~~v~~~~grvpviaG~--g-~~~t~eai~-lak~a 95 (299)
T COG0329 20 GSVDEEALRRLVEFLIAAGVDGLVVLGTTGESPTLTLEERKEVLEAVVEAVGGRVPVIAGV--G-SNSTAEAIE-LAKHA 95 (299)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECCCCccchhcCHHHHHHHHHHHHHHHCCCCcEEEec--C-CCcHHHHHH-HHHHH
Confidence 45677778777888899999988877654433 222 2233333332 222222211 1 122333333 34444
Q ss_pred HHcCCCeEEEEEecCCCccCC-HHHHHHHHHHHHHcCCcEEEec
Q 014320 193 KEKGINSFKFFMAYKGSFMIN-DELLIEGFKRCKSLGALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~-~~~l~~~~~~a~~~g~~v~~H~ 235 (427)
++.|++++-+..-+ ....+ ++.+......+...++|+.+-.
T Consensus 96 ~~~Gad~il~v~Py--Y~k~~~~gl~~hf~~ia~a~~lPvilYN 137 (299)
T COG0329 96 EKLGADGILVVPPY--YNKPSQEGLYAHFKAIAEAVDLPVILYN 137 (299)
T ss_pred HhcCCCEEEEeCCC--CcCCChHHHHHHHHHHHHhcCCCEEEEe
Confidence 47899988554322 12233 4455556666677788887763
No 330
>COG0413 PanB Ketopantoate hydroxymethyltransferase [Coenzyme metabolism]
Probab=28.76 E-value=2.3e+02 Score=25.97 Aligned_cols=53 Identities=25% Similarity=0.245 Sum_probs=37.6
Q ss_pred CChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhH
Q 014320 180 WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAV 241 (427)
Q Consensus 180 ~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~ 241 (427)
..++.++...++++..|++.+|+= .-+++.+.++...+.|+||..|. -.++.+
T Consensus 91 s~~~a~~nA~r~~ke~gA~aVKlE---------GG~~~~~~i~~L~~~gIPV~gHiGLtPQ~v 144 (268)
T COG0413 91 SPEQALKNAARLMKEAGADAVKLE---------GGEEMAETIKRLTERGIPVMGHIGLTPQSV 144 (268)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEc---------CCHHHHHHHHHHHHcCCceEEEecCChhhh
Confidence 345566667777756899999872 12566777777788899999997 455443
No 331
>TIGR03586 PseI pseudaminic acid synthase.
Probab=28.61 E-value=3.1e+02 Score=26.27 Aligned_cols=93 Identities=18% Similarity=0.168 Sum_probs=52.5
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcC
Q 014320 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (427)
Q Consensus 212 ~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~ 291 (427)
++.+.++++.+.+++.|+.+..-+-+.+.++ .+.+.|+.-..-.. ... .-...++.....|.++.+.-.
T Consensus 74 l~~e~~~~L~~~~~~~Gi~~~stpfd~~svd----~l~~~~v~~~KI~S---~~~----~n~~LL~~va~~gkPvilstG 142 (327)
T TIGR03586 74 TPWEWHKELFERAKELGLTIFSSPFDETAVD----FLESLDVPAYKIAS---FEI----TDLPLIRYVAKTGKPIIMSTG 142 (327)
T ss_pred CCHHHHHHHHHHHHHhCCcEEEccCCHHHHH----HHHHcCCCEEEECC---ccc----cCHHHHHHHHhcCCcEEEECC
Confidence 5778889999999999999999887776663 44455543221100 000 002244555567888766655
Q ss_pred CC-HHH-HHHHHHHhhcCC-CEEEecC
Q 014320 292 MS-MDA-MEEIAKARKAGQ-RVIGEPV 315 (427)
Q Consensus 292 ~~-~~~-~~~i~~~~~~G~-~v~~~~~ 315 (427)
-. .+. ...++.+++.|. +++...|
T Consensus 143 ~~t~~Ei~~Av~~i~~~g~~~i~LlhC 169 (327)
T TIGR03586 143 IATLEEIQEAVEACREAGCKDLVLLKC 169 (327)
T ss_pred CCCHHHHHHHHHHHHHCCCCcEEEEec
Confidence 32 222 223344455665 3544334
No 332
>cd08148 RuBisCO_large Ribulose bisphosphate carboxylase large chain. Ribulose bisphosphate carboxylase (Rubisco) plays an important role in the Calvin reductive pentose phosphate pathway. It catalyzes the primary CO2 fixation step. Rubisco is activated by carbamylation of an active site lysine, stabilized by a divalent cation, which then catalyzes the proton abstraction from the substrate ribulose 1,5 bisphosphate (RuBP) and leads to the formation of two molecules of 3-phosphoglycerate. Members of the Rubisco family can be divided into 4 subgroups, Form I-IV, which differ in their taxonomic distribution and subunit composition. Form I-III have Rubisco activity, while Form IV, also called Rubisco-like proteins (RLP), are missing critical active site residues and therefore do not catalyze CO2 fixation. They are believed to utilize a related enzymatic mechanism, but have divergent functions.
Probab=28.49 E-value=5.6e+02 Score=25.01 Aligned_cols=109 Identities=13% Similarity=0.003 Sum_probs=55.7
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcCCCCC---cHHHHHHHHH----HHhccccceeceeccccCCChhhHHHHHHHHHH
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYE----KKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKE 194 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 194 (427)
.+++.+...+.....+|+=-+-|-....+. ...+.+.... +...+.--...+....+...++..+..+... +
T Consensus 140 lsp~~~a~~~y~~~~GG~D~IKDDE~l~~q~~~p~~eRv~~~~~a~~~a~~eTG~~~~y~~NiT~~~~em~~ra~~~~-~ 218 (366)
T cd08148 140 LNPKYTAEAAYAAALGGLDLIKDDETLTDQPFCPLRDRITEVAAALDRVQEETGEKKLYAVNVTAGTFEIIERAERAL-E 218 (366)
T ss_pred CCHHHHHHHHHHHHhCCCCccccccccCCCCCCcHHHHHHHHHHHHHHHHHhhCCcceEEEEccCCHHHHHHHHHHHH-H
Confidence 467777777888899998888775432222 3333333322 2221111111111222333344455555554 6
Q ss_pred cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
.|...+-+-.. ......++.+.+..+ .+++++.|...
T Consensus 219 ~G~~~~mv~~~-----~~G~~~l~~l~~~~~-~~l~IhaHrA~ 255 (366)
T cd08148 219 LGANMLMVDVL-----TAGFSALQALAEDFE-IDLPIHVHRAM 255 (366)
T ss_pred hCCCEEEEecc-----ccchHHHHHHHHhCc-CCcEEEecccc
Confidence 77765543221 223344666655543 69999999543
No 333
>PTZ00170 D-ribulose-5-phosphate 3-epimerase; Provisional
Probab=28.48 E-value=4.3e+02 Score=23.64 Aligned_cols=47 Identities=13% Similarity=0.022 Sum_probs=22.3
Q ss_pred HHHHHHHHHcCCCeEEE-EEecCCCcc--CCHHHHHHHHHHHHHcCCcEEEec
Q 014320 186 DEMEVMVKEKGINSFKF-FMAYKGSFM--INDELLIEGFKRCKSLGALAMVHA 235 (427)
Q Consensus 186 ~~~~~l~~~~g~~~ik~-~~~~~~~~~--~~~~~l~~~~~~a~~~g~~v~~H~ 235 (427)
++++++. ..|++.+.+ .|+.+..+. ...+.++++.+.. .++++.+|.
T Consensus 23 ~~~~~l~-~~~~~~~H~DimDg~fvpn~~~G~~~v~~lr~~~--~~~~lDvHL 72 (228)
T PTZ00170 23 DEAQDVL-SGGADWLHVDVMDGHFVPNLSFGPPVVKSLRKHL--PNTFLDCHL 72 (228)
T ss_pred HHHHHHH-HcCCCEEEEecccCccCCCcCcCHHHHHHHHhcC--CCCCEEEEE
Confidence 3444444 567776654 233333332 3444444443221 146677774
No 334
>cd08212 RuBisCO_large_I Ribulose bisphosphate carboxylase large chain, Form I. Ribulose bisphosphate carboxylase (Rubisco) plays an important role in the Calvin reductive pentose phosphate pathway. It catalyzes the primary CO2 fixation step. Rubisco is activated by carbamylation of an active site lysine, stabilized by a divalent cation, which then catalyzes the proton abstraction from the substrate ribulose 1,5 bisphosphate (RuBP) and leads to the formation of two molecules of 3-phosphoglycerate. Members of the Rubisco family can be divided into 4 subgroups, Form I-IV , which differ in their taxonomic distribution and subunit composition. Form I is the most abundant class, present in plants, algae, and bacteria, and forms large complexes composed of 8 large and 8 small subunits.
Probab=28.33 E-value=6.1e+02 Score=25.54 Aligned_cols=109 Identities=15% Similarity=0.048 Sum_probs=57.4
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcCCCCC---cHHHHHHHHHHH----hccccceeceecccc-CCChhhHHHHHHHHH
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKK----AKNSCMDYGFHMAIT-KWDEVVSDEMEVMVK 193 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~ 193 (427)
.+++.+...+.....+|+=-+-|-....+. ...+.+....+. ..+.--...+...++ ...++..+..+...
T Consensus 158 lsp~~~A~~~~~~~~GGvD~IKDDE~l~~~~~~p~~~Rv~~~~~a~~~a~~eTG~~~~y~~NiTa~~~~em~~ra~~a~- 236 (450)
T cd08212 158 LSAKNYGRVVYECLRGGLDFTKDDENINSQPFMRWRDRFLFVAEAVNKAQAETGEVKGHYLNVTAGTMEEMYKRAEFAK- 236 (450)
T ss_pred CCHHHHHHHHHHHHccCCcccccCccCCCCCCCCHHHHHHHHHHHHHHHHHhhCCcceeeccccCCCHHHHHHHHHHHH-
Confidence 356777777888899998888775432222 333333333222 211111111112223 22344444444444
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
+.|...+-+-+- . .-..++.+.+.+++.+++++.|...
T Consensus 237 ~~G~~~~mv~~~-----~-G~~~l~~l~~~a~~~~l~IhaHrA~ 274 (450)
T cd08212 237 ELGSPIIMHDLL-----T-GFTAIQSLAKWCRDNGMLLHLHRAG 274 (450)
T ss_pred HhCCCeEeeecc-----c-ccchHHHHHHHhhhcCceEEecccc
Confidence 567765433211 1 3344778888787889999999543
No 335
>PRK06552 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=28.25 E-value=4.3e+02 Score=23.49 Aligned_cols=100 Identities=12% Similarity=0.037 Sum_probs=57.8
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhcc-ccceeceeccccCCChhhHHHHHHHHHHcCCCeE
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKN-SCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSF 200 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~i 200 (427)
.+.++.....++...+|++.+--.... ....+.++..++.... ..+.++. +. -.+ .+++++.. +.|+..+
T Consensus 22 ~~~~~a~~~~~al~~~Gi~~iEit~~~--~~a~~~i~~l~~~~~~~p~~~vGa--GT-V~~---~~~~~~a~-~aGA~Fi 92 (213)
T PRK06552 22 ESKEEALKISLAVIKGGIKAIEVTYTN--PFASEVIKELVELYKDDPEVLIGA--GT-VLD---AVTARLAI-LAGAQFI 92 (213)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEECCC--ccHHHHHHHHHHHcCCCCCeEEee--ee-CCC---HHHHHHHH-HcCCCEE
Confidence 356666677888899999998643322 2345566666554321 1122322 11 112 33556666 6788765
Q ss_pred EEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhH
Q 014320 201 KFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAV 241 (427)
Q Consensus 201 k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~ 241 (427)
++| .++ .++++.+++.|+++.-=+.+..++
T Consensus 93 ---vsP----~~~----~~v~~~~~~~~i~~iPG~~T~~E~ 122 (213)
T PRK06552 93 ---VSP----SFN----RETAKICNLYQIPYLPGCMTVTEI 122 (213)
T ss_pred ---ECC----CCC----HHHHHHHHHcCCCEECCcCCHHHH
Confidence 222 234 456667888999987777776655
No 336
>PRK12857 fructose-1,6-bisphosphate aldolase; Reviewed
Probab=27.98 E-value=5.1e+02 Score=24.25 Aligned_cols=103 Identities=10% Similarity=0.013 Sum_probs=57.8
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHH-HHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccc
Q 014320 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (427)
Q Consensus 181 ~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~ 259 (427)
+.+....+-+..++.+...|- .+.+........+.+.. +...|++...||.+|.......+.+ .+..+.|+.+.=.-
T Consensus 27 n~e~~~avi~AAee~~sPvIl-q~~~~~~~~~g~~~~~~~~~~~A~~~~VPValHLDH~~~~e~i-~~ai~~GftSVM~D 104 (284)
T PRK12857 27 NMEIVQAIVAAAEAEKSPVII-QASQGAIKYAGIEYISAMVRTAAEKASVPVALHLDHGTDFEQV-MKCIRNGFTSVMID 104 (284)
T ss_pred CHHHHHHHHHHHHHhCCCEEE-EechhHhhhCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHH-HHHHHcCCCeEEEe
Confidence 334445555555444544432 12222111234455544 5567788899999998544433333 34556787554222
Q ss_pred cccCCHHHHHHHHHHHHHHHHhcCCC
Q 014320 260 ALSRPPLLEGEATTRAIRLAEFVNTP 285 (427)
Q Consensus 260 ~~~~p~~~e~~a~~~~~~~~~~~g~~ 285 (427)
.-..|-.-.....++..+.+...|+.
T Consensus 105 gS~lp~eeNi~~T~~vv~~Ah~~gvs 130 (284)
T PRK12857 105 GSKLPLEENIALTKKVVEIAHAVGVS 130 (284)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCE
Confidence 23456666677778888888887764
No 337
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=27.81 E-value=2.1e+02 Score=27.99 Aligned_cols=79 Identities=18% Similarity=0.203 Sum_probs=49.8
Q ss_pred HHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCH
Q 014320 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPP 265 (427)
Q Consensus 186 ~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~ 265 (427)
+.+.+.++..|....-+-..+. ..++++.+.+.++.-.+......+|+|+...+ +
T Consensus 93 ~R~~~ia~~~g~~v~~~~~~wg--~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGv------------l----------- 147 (383)
T COG0075 93 ERFAEIAERYGAEVVVLEVEWG--EAVDPEEVEEALDKDPDIKAVAVVHNETSTGV------------L----------- 147 (383)
T ss_pred HHHHHHHHHhCCceEEEeCCCC--CCCCHHHHHHHHhcCCCccEEEEEeccCcccc------------c-----------
Confidence 3456666567776554433332 34689999999886556677889999987543 1
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEcCCC
Q 014320 266 LLEGEATTRAIRLAEFVNTPLYVVHVMS 293 (427)
Q Consensus 266 ~~e~~a~~~~~~~~~~~g~~~~i~H~~~ 293 (427)
..+++...+++++|..+.+.-+++
T Consensus 148 ----npl~~I~~~~k~~g~l~iVDaVsS 171 (383)
T COG0075 148 ----NPLKEIAKAAKEHGALLIVDAVSS 171 (383)
T ss_pred ----CcHHHHHHHHHHcCCEEEEEeccc
Confidence 233445566666777665555554
No 338
>TIGR03217 4OH_2_O_val_ald 4-hydroxy-2-oxovalerate aldolase. Members of this protein family are 4-hydroxy-2-oxovalerate aldolase, also called 4-hydroxy-2-ketovalerate aldolase and 2-oxo-4-hydroxypentanoate aldolase. This enzyme, part of the pathway for the meta-cleavage of catechol, produces pyruvate and acetaldehyde. Acetaldehyde is then converted by acetaldehyde dehydrogenase (acylating) (DmpF; EC 1.2.1.10) to acetyl-CoA. The two enzymes are tightly associated.
Probab=27.62 E-value=5.5e+02 Score=24.59 Aligned_cols=103 Identities=10% Similarity=-0.021 Sum_probs=54.1
Q ss_pred HHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecCCC
Q 014320 131 QAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGS 209 (427)
Q Consensus 131 ~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~ 209 (427)
.+.+...|+..++-....... ...+.++..++.+.. +...+... ...+++.+.++.+.+...|++.|-+ .+..|
T Consensus 93 l~~a~~~gvd~iri~~~~~e~d~~~~~i~~ak~~G~~--v~~~l~~s-~~~~~e~l~~~a~~~~~~Ga~~i~i-~DT~G- 167 (333)
T TIGR03217 93 LKAAYDAGARTVRVATHCTEADVSEQHIGMARELGMD--TVGFLMMS-HMTPPEKLAEQAKLMESYGADCVYI-VDSAG- 167 (333)
T ss_pred HHHHHHCCCCEEEEEeccchHHHHHHHHHHHHHcCCe--EEEEEEcc-cCCCHHHHHHHHHHHHhcCCCEEEE-ccCCC-
Confidence 566788899887733211111 233334444443322 11111111 1223444444444444688887633 23222
Q ss_pred ccCCHHHHHHHHHHHHHc-C--CcEEEecCChh
Q 014320 210 FMINDELLIEGFKRCKSL-G--ALAMVHAENGD 239 (427)
Q Consensus 210 ~~~~~~~l~~~~~~a~~~-g--~~v~~H~e~~~ 239 (427)
...++.+.+++...++. + +++.+|+.++.
T Consensus 168 -~~~P~~v~~~v~~l~~~l~~~i~ig~H~Hnnl 199 (333)
T TIGR03217 168 -AMLPDDVRDRVRALKAVLKPETQVGFHAHHNL 199 (333)
T ss_pred -CCCHHHHHHHHHHHHHhCCCCceEEEEeCCCC
Confidence 35788888888887653 4 78888986654
No 339
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=27.52 E-value=2.1e+02 Score=27.90 Aligned_cols=48 Identities=13% Similarity=0.043 Sum_probs=32.5
Q ss_pred HHHHHHHHHHcCCCeEEEEEecCCCc--cCCHHHHHHHHHHHHHcCCcEEE
Q 014320 185 SDEMEVMVKEKGINSFKFFMAYKGSF--MINDELLIEGFKRCKSLGALAMV 233 (427)
Q Consensus 185 ~~~~~~l~~~~g~~~ik~~~~~~~~~--~~~~~~l~~~~~~a~~~g~~v~~ 233 (427)
.+.+++.. ..+...+-+...||.+. .++.++|+++.+.|+++|+.|..
T Consensus 147 ~~~LE~~~-~~~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VIS 196 (388)
T COG1168 147 FDALEKAF-VDERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVIS 196 (388)
T ss_pred HHHHHHHH-hcCCccEEEEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEe
Confidence 45556555 33333333445666543 46899999999999999998864
No 340
>COG0191 Fba Fructose/tagatose bisphosphate aldolase [Carbohydrate transport and metabolism]
Probab=27.51 E-value=5.2e+02 Score=24.20 Aligned_cols=49 Identities=16% Similarity=0.197 Sum_probs=31.2
Q ss_pred HHHHHHHHHcCCCeEEEEEec-CC-----CccCCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 186 DEMEVMVKEKGINSFKFFMAY-KG-----SFMINDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 186 ~~~~~l~~~~g~~~ik~~~~~-~~-----~~~~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
++..+.++.-|++.+-+.++. || .+..+.+.|+++-+.. ++|+..|-.+
T Consensus 159 ~ea~~fv~~tgiD~LA~aiGn~HG~Yk~~~p~L~~~~L~~i~~~~---~~PlVlHGgS 213 (286)
T COG0191 159 EEALEFVERTGIDALAAAIGNVHGVYKPGNPKLDFDRLKEIQEAV---SLPLVLHGGS 213 (286)
T ss_pred HHHHHHHhccCcceeeeeccccccCCCCCCCCCCHHHHHHHHHHh---CCCEEEeCCC
Confidence 445555645678877665542 33 4446777777776654 4999999543
No 341
>smart00481 POLIIIAc DNA polymerase alpha chain like domain. DNA polymerase alpha chain like domain, incl. family of hypothetical proteins
Probab=27.49 E-value=80 Score=21.81 Aligned_cols=32 Identities=19% Similarity=0.182 Sum_probs=20.9
Q ss_pred ccccccccCc-CCCCChhhHHHHHHHHHcCCceEEe
Q 014320 109 DPHTHLAMEF-MGSETIDDFFSGQAAALAGGTTMHI 143 (427)
Q Consensus 109 D~H~H~~~~~-~g~~~~e~~~~~~~~~l~~GvTtv~ 143 (427)
|.|+|...+. .+...++++ .+.+.+.|...+.
T Consensus 1 dlH~Ht~~S~~~~~~~~~~~---~~~a~~~g~~~v~ 33 (67)
T smart00481 1 DLHVHSDYSLLDGALSPEEL---VKRAKELGLKAIA 33 (67)
T ss_pred CCccccCCccccccCCHHHH---HHHHHHcCCCEEE
Confidence 6788876553 344555555 6677778887765
No 342
>PLN02768 AMP deaminase
Probab=27.07 E-value=1.8e+02 Score=31.41 Aligned_cols=19 Identities=16% Similarity=0.163 Sum_probs=16.4
Q ss_pred HHHHHHhcCCceEEecCCC
Q 014320 351 ALQAALATGILQLVGTDHC 369 (427)
Q Consensus 351 ~l~~~l~~G~~~~lgSD~~ 369 (427)
.+.++++.|+.++|+||..
T Consensus 716 Pf~~f~~~GL~VSLNTDDP 734 (835)
T PLN02768 716 PFPMFFLRGLNVSLSTDDP 734 (835)
T ss_pred hHHHHHHCCCEEEEcCCCc
Confidence 3677999999999999963
No 343
>PRK14040 oxaloacetate decarboxylase; Provisional
Probab=27.02 E-value=7.5e+02 Score=25.94 Aligned_cols=180 Identities=16% Similarity=0.139 Sum_probs=97.4
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcC--------CCCCcHHHHHHHHHHHhccccceecee----ccccCCChhhHHHHH
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVI--------PINGSLTAGFEAYEKKAKNSCMDYGFH----MAITKWDEVVSDEME 189 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 189 (427)
...++....+...-+.|+.++--.++ .....-++.++..++..++..+..-.. .+.....++..+...
T Consensus 24 ~~~~d~l~ia~~ld~~G~~siE~~GGatf~~~~~~~~e~p~e~lr~l~~~~~~~~lqml~Rg~n~vg~~~ypddvv~~~v 103 (593)
T PRK14040 24 LRLDDMLPIAAKLDKVGYWSLESWGGATFDACIRFLGEDPWERLRELKKAMPNTPQQMLLRGQNLLGYRHYADDVVERFV 103 (593)
T ss_pred cCHHHHHHHHHHHHHcCCCEEEecCCcchhhhccccCCCHHHHHHHHHHhCCCCeEEEEecCcceeccccCcHHHHHHHH
Confidence 44555555566667779988754321 111245677777777666544322111 112222344444444
Q ss_pred HHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEE---EecC----ChhhHHHHHHHHHHcCCCCcc---cc
Q 014320 190 VMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAM---VHAE----NGDAVFEGQKRMIELGITGPE---GH 259 (427)
Q Consensus 190 ~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~---~H~e----~~~~~~~~~~~l~~~G~~~~~---~~ 259 (427)
+...+.|++.+.+|... .+.+.+...++.|++.|+.+. .+.. +.+......+.+.+.|..... ..
T Consensus 104 ~~a~~~Gid~~rifd~l-----nd~~~~~~ai~~ak~~G~~~~~~i~yt~~p~~~~~~~~~~a~~l~~~Gad~i~i~Dt~ 178 (593)
T PRK14040 104 ERAVKNGMDVFRVFDAM-----NDPRNLETALKAVRKVGAHAQGTLSYTTSPVHTLQTWVDLAKQLEDMGVDSLCIKDMA 178 (593)
T ss_pred HHHHhcCCCEEEEeeeC-----CcHHHHHHHHHHHHHcCCeEEEEEEEeeCCccCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 44337899999988532 245788999999999998642 2211 223444445567777764321 11
Q ss_pred cccCCHHHHHHHHHHHHHHH-HhcCCCE-EEEcCCCHHHHHHHHHHhhcCCCEE
Q 014320 260 ALSRPPLLEGEATTRAIRLA-EFVNTPL-YVVHVMSMDAMEEIAKARKAGQRVI 311 (427)
Q Consensus 260 ~~~~p~~~e~~a~~~~~~~~-~~~g~~~-~i~H~~~~~~~~~i~~~~~~G~~v~ 311 (427)
....|.. +.+.+... ...+.++ ..+|.+..-++.-.-.+.+.|+...
T Consensus 179 G~l~P~~-----~~~lv~~lk~~~~~pi~~H~Hnt~GlA~An~laAieAGa~~v 227 (593)
T PRK14040 179 GLLKPYA-----AYELVSRIKKRVDVPLHLHCHATTGLSTATLLKAIEAGIDGV 227 (593)
T ss_pred CCcCHHH-----HHHHHHHHHHhcCCeEEEEECCCCchHHHHHHHHHHcCCCEE
Confidence 2223332 22222222 2234443 2456666666666666778898754
No 344
>cd00953 KDG_aldolase KDG (2-keto-3-deoxygluconate) aldolases found in archaea. This subfamily of enzymes is adapted for high thermostability and shows specificity for non-phosphorylated substrates. The enzyme catalyses the reversible aldol cleavage of 2-keto-3-dexoygluconate to pyruvate and glyceraldehyde, the third step of a modified non-phosphorylated Entner-Doudoroff pathway of glucose oxidation. KDG aldolase shows no significant sequence similarity to microbial 2-keto-3-deoxyphosphogluconate (KDPG) aldolases, and the enzyme shows no activity with glyceraldehyde 3-phosphate as substrate. The enzyme is a tetramer and a member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=27.00 E-value=5.1e+02 Score=23.97 Aligned_cols=106 Identities=15% Similarity=0.032 Sum_probs=57.9
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHhccccceeceeccccC-CChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAKNSCMDYGFHMAITK-WDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ 192 (427)
|..+.+.+....+..+..||..+.-.+..+.. +.. +.++...+...+ + ..+... ...+.++..+..
T Consensus 15 g~iD~~~~~~li~~l~~~Gv~Gl~~~GstGE~~~Lt~eEr~~l~~~~~~~~~~--v----i~gvg~~~~~~ai~~a~~a- 87 (279)
T cd00953 15 NKIDKEKFKKHCENLISKGIDYVFVAGTTGLGPSLSFQEKLELLKAYSDITDK--V----IFQVGSLNLEESIELARAA- 87 (279)
T ss_pred CCcCHHHHHHHHHHHHHcCCcEEEEcccCCCcccCCHHHHHHHHHHHHHHcCC--E----EEEeCcCCHHHHHHHHHHH-
Confidence 45667777777888899999999876654332 222 223333332221 1 112212 233444434443
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEe
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH 234 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H 234 (427)
++.|++.+-+.. |.-....+++.+.+-++...+ ++++.+.
T Consensus 88 ~~~Gad~v~v~~-P~y~~~~~~~~i~~yf~~v~~-~lpv~iY 127 (279)
T cd00953 88 KSFGIYAIASLP-PYYFPGIPEEWLIKYFTDISS-PYPTFIY 127 (279)
T ss_pred HHcCCCEEEEeC-CcCCCCCCHHHHHHHHHHHHh-cCCEEEE
Confidence 378999875433 211111356777666655555 8999887
No 345
>COG0134 TrpC Indole-3-glycerol phosphate synthase [Amino acid transport and metabolism]
Probab=26.94 E-value=2.4e+02 Score=25.84 Aligned_cols=46 Identities=24% Similarity=0.368 Sum_probs=34.4
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEG 244 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~ 244 (427)
..|++.+-+.+. .++++++.++++.|+++|+-+.+-+.+.++.+..
T Consensus 127 ~~GADavLLI~~-----~L~~~~l~el~~~A~~LGm~~LVEVh~~eEl~rA 172 (254)
T COG0134 127 AAGADAVLLIVA-----ALDDEQLEELVDRAHELGMEVLVEVHNEEELERA 172 (254)
T ss_pred HcCcccHHHHHH-----hcCHHHHHHHHHHHHHcCCeeEEEECCHHHHHHH
Confidence 578776533322 3689999999999999999888877777666444
No 346
>cd00947 TBP_aldolase_IIB Tagatose-1,6-bisphosphate (TBP) aldolase and related Type B Class II aldolases. TBP aldolase is a tetrameric class II aldolase that catalyzes the reversible condensation of dihydroxyacetone phosphate with glyceraldehyde 3-phsophate to produce tagatose 1,6-bisphosphate. There is an absolute requirement for a divalent metal ion, usually zinc, and in addition the enzymes are activated by monovalent cations such as Na+. The type A and type B Class II FBPA's differ in the presence and absence of distinct indels in the sequence that result in differing loop lengths in the structures.
Probab=26.68 E-value=5.3e+02 Score=24.02 Aligned_cols=102 Identities=14% Similarity=0.018 Sum_probs=56.4
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHH-HHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCccccc
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEG-FKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHA 260 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~-~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~ 260 (427)
-+..+.+-+..++.+...|-- +.+........+.+... ...|++...||.+|.......+.+ .+..+.|+.+.=.-.
T Consensus 23 ~e~~~avi~AAe~~~sPvIi~-~~~~~~~~~~~~~~~~~~~~~a~~~~VPV~lHLDH~~~~~~i-~~ai~~GftSVMiD~ 100 (276)
T cd00947 23 LETLKAILEAAEETRSPVILQ-ISEGAIKYAGLELLVAMVKAAAERASVPVALHLDHGSSFELI-KRAIRAGFSSVMIDG 100 (276)
T ss_pred HHHHHHHHHHHHHhCCCEEEE-cCcchhhhCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHH-HHHHHhCCCEEEeCC
Confidence 344445555444445444321 12211122344545544 456777899999997544333333 344567875543223
Q ss_pred ccCCHHHHHHHHHHHHHHHHhcCCC
Q 014320 261 LSRPPLLEGEATTRAIRLAEFVNTP 285 (427)
Q Consensus 261 ~~~p~~~e~~a~~~~~~~~~~~g~~ 285 (427)
-..|-.-......+..++++..|+.
T Consensus 101 S~l~~eeNi~~t~~vv~~ah~~gv~ 125 (276)
T cd00947 101 SHLPFEENVAKTKEVVELAHAYGVS 125 (276)
T ss_pred CCCCHHHHHHHHHHHHHHHHHcCCe
Confidence 3456666667778888888888765
No 347
>PF01964 ThiC: ThiC family; InterPro: IPR002817 ThiC is found within the thiamin biosynthesis operon. ThiC is involved in thiamin biosynthesis []. The precise catalytic function of ThiC is still not known. ThiC participates in the formation of 4-Amino-5-hydroxymethyl-2-methylpyrimidine from AIR, an intermediate in the de novo pyrimidine biosynthesis.; GO: 0009228 thiamine biosynthetic process; PDB: 3EPO_A 3EPN_B 3EPM_B.
Probab=26.65 E-value=3.9e+02 Score=26.29 Aligned_cols=53 Identities=23% Similarity=0.174 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHhcCCCEEEEcCCC--------H--------HHHHHHHHHhhcCCCEEEecCccceeeC
Q 014320 269 GEATTRAIRLAEFVNTPLYVVHVMS--------M--------DAMEEIAKARKAGQRVIGEPVVSGLVLD 322 (427)
Q Consensus 269 ~~a~~~~~~~~~~~g~~~~i~H~~~--------~--------~~~~~i~~~~~~G~~v~~~~~p~~l~~~ 322 (427)
+....+.+++++++++-+.+.-.-- . .--++.++++++|+.|..|- |-|.-++
T Consensus 201 y~~fD~lLeI~k~yDVtLSLGDglRPG~i~Da~D~aQi~EL~~lgeL~~rA~e~gVQvMVEG-PGHVPl~ 269 (420)
T PF01964_consen 201 YEHFDRLLEIAKEYDVTLSLGDGLRPGCIADATDRAQIQELIILGELVKRAREAGVQVMVEG-PGHVPLN 269 (420)
T ss_dssp HHTHHHHHHHHTTTT-EEEE--TT--SSGGGTT-HHHHHHHHHHHHHHHHHHHTT--EEEEE--SB--GG
T ss_pred HHhHHHHHHHHHHhCeeEecccccCCCCcCCCCcHHHHHHHHHHHHHHHHHHHCCCeEEeeC-CCCCCHH
Confidence 3456778888888887555444311 0 11366788899999988865 6666554
No 348
>cd08206 RuBisCO_large_I_II_III Ribulose bisphosphate carboxylase large chain, Form I,II,III. Ribulose bisphosphate carboxylase (Rubisco) plays an important role in the Calvin reductive pentose phosphate pathway. It catalyzes the primary CO2 fixation step. Rubisco is activated by carbamylation of an active site lysine, stabilized by a divalent cation, which then catalyzes the proton abstraction from the substrate ribulose 1,5 bisphosphate (RuBP) and leads to the formation of two molecules of 3-phosphoglycerate. Members of the Rubisco family can be divided into 4 subgroups, Form I-IV, which differ in their taxonomic distribution and subunit composition. Form I-III have Rubisco activity, while Form IV, also called Rubico-like proteins (RLP), are missing critical active site residues.
Probab=26.61 E-value=6.5e+02 Score=25.04 Aligned_cols=110 Identities=14% Similarity=0.019 Sum_probs=58.1
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcCCCCC---cHHHHHHHHHHH----hccccceeceeccccCC-ChhhHHHHHHHHH
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKK----AKNSCMDYGFHMAITKW-DEVVSDEMEVMVK 193 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~ 193 (427)
++++.+...+.....+|+=-+-|-....+. ...+.+....+. ..+.--...+....+.. .++..+..+...
T Consensus 145 lsp~~~a~~~y~~~~GGiD~IKDDE~l~~q~~~p~~eRv~~~~~a~~~a~~eTG~~~~y~~NiT~~~~~em~~ra~~~~- 223 (414)
T cd08206 145 LSPKEYARVVYEALRGGLDFVKDDENQNSQPFMRFEDRILFVAEAMDKAEAETGEAKGHYLNITADTPEEMIKRAEFAK- 223 (414)
T ss_pred CCHHHHHHHHHHHHhcCCcccccCccCCCCCCCcHHHHHHHHHHHHHHHHHhhCCcceEEeccCCCcHHHHHHHHHHHH-
Confidence 467778778888999998888775432222 333333333222 21111111111222322 334444444444
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
+.|...+-+-. .......++.+.+.+.+.+++++.|...
T Consensus 224 ~~G~~~~mv~~-----~~~G~~~l~~l~~~~~~~~l~ih~HrA~ 262 (414)
T cd08206 224 ELGSVIVMVDG-----VTAGWTAIQSARRWCPDNGLALHAHRAG 262 (414)
T ss_pred HhCCcEEEEee-----ecccHHHHHHHHHhccccCeEEEEcccc
Confidence 67776553322 1234455777777666789999999543
No 349
>KOG2550 consensus IMP dehydrogenase/GMP reductase [Nucleotide transport and metabolism]
Probab=26.59 E-value=6.4e+02 Score=24.99 Aligned_cols=202 Identities=11% Similarity=0.011 Sum_probs=0.0
Q ss_pred EeCCCCEEeccccccccccccC---------------cCCCCChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHH
Q 014320 96 LDATGKFVMPGGIDPHTHLAME---------------FMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAY 160 (427)
Q Consensus 96 iD~~g~~v~PG~ID~H~H~~~~---------------~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~ 160 (427)
.+.++-+++|||||.-++--.- .....+..+..-+...++.+|++.++ ++..+......++..
T Consensus 30 LtynDfliLPg~idF~s~eVsL~t~ltr~itl~tPlvsSpMDTVtes~MAiaMAl~ggIg~IH--hNctpe~QA~~v~~v 107 (503)
T KOG2550|consen 30 LTYNDFLILPGFIDFASDEVSLQTKLTRNITLNTPLVSSPMDTVTESEMAIAMALLGGIGFIH--HNCTPEDQADMVRRV 107 (503)
T ss_pred ccccceeecccccccccccceeehhhhhcccccCceeccCCcccchhHHHHHHHhcCCceeee--cCCCHHHHHHHHHHH
Q ss_pred HHHhccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEE----------------------------------Eec
Q 014320 161 EKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFF----------------------------------MAY 206 (427)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~----------------------------------~~~ 206 (427)
+........+... ..++...-++.+....+|..++.+- -..
T Consensus 108 K~~~~g~~~~p~v-----~sp~~tvg~v~~~k~~~gF~g~pvTe~g~~~~KLvG~vtsrdi~f~~~~~~~~~~vmt~~~~ 182 (503)
T KOG2550|consen 108 KNYENGFINNPIV-----ISPTTTVGEVKEAKEKHGFSGIPVTEDGKRGSKLVGIITSRDIQFLEDNSLLVSDVMTKNPV 182 (503)
T ss_pred HHhhcccccCCcc-----cCCcccchhhhhhcccccccccccccCCcccceeEEEEehhhhhhhhcccchhhhhcccccc
Q ss_pred CCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCC----CCcccccccCCHHHHHHHHHHHHHHHHhc
Q 014320 207 KGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGI----TGPEGHALSRPPLLEGEATTRAIRLAEFV 282 (427)
Q Consensus 207 ~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~----~~~~~~~~~~p~~~e~~a~~~~~~~~~~~ 282 (427)
.++...+.++..++++..++-.+++.--..+--.+...-+.....+. .+....+.+......-+.-+..+++..+.
T Consensus 183 ~~~~gi~l~~~neiL~~~kkGkl~iv~~~gelva~~~rtDl~k~~~yPlask~~~kqll~gAaiGTre~dK~rl~ll~~a 262 (503)
T KOG2550|consen 183 TGAQGITLKEANEILKKIKKGKLPVVDDKGELVAMLSRTDLMKNRDYPLASKDSTKQLLCGAAIGTRDDDKERLDLLVQA 262 (503)
T ss_pred cccccccHHHHHHHHHhhhcCCcceeccCCceeeeeehhhhhhhcCCCccccCcccceeeeeccccccchhHHHHHhhhc
Q ss_pred CCCEEEEcCCCHHHHHHHHHHh
Q 014320 283 NTPLYVVHVMSMDAMEEIAKAR 304 (427)
Q Consensus 283 g~~~~i~H~~~~~~~~~i~~~~ 304 (427)
|+.+.+...+...+.-.++..|
T Consensus 263 GvdvviLDSSqGnS~~qiemik 284 (503)
T KOG2550|consen 263 GVDVVILDSSQGNSIYQLEMIK 284 (503)
T ss_pred CCcEEEEecCCCcchhHHHHHH
No 350
>PRK05588 histidinol-phosphatase; Provisional
Probab=26.52 E-value=62 Score=29.59 Aligned_cols=34 Identities=18% Similarity=0.177 Sum_probs=23.2
Q ss_pred ccccccccccCcCCCCChhhHHHHHHHHHcCCceEEe
Q 014320 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (427)
Q Consensus 107 ~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~ 143 (427)
++|.|+|......+..+.++ ..+.|.+.|++.++
T Consensus 1 ~~D~H~HT~~s~~~~~~~ee---~v~~A~~~Gl~~~~ 34 (255)
T PRK05588 1 MFDTHIHTEFSTDSKMKIEE---AIKKAKENNLGIII 34 (255)
T ss_pred CeeecccCCCCCCcccCHHH---HHHHHHHcCCCEEE
Confidence 47999998764333344444 47888999998653
No 351
>cd00740 MeTr MeTr subgroup of pterin binding enzymes. This family includes cobalamin-dependent methyltransferases such as methyltetrahydrofolate, corrinoid iron-sulfur protein methyltransferase (MeTr) and methionine synthase (MetH). Cobalamin-dependent methyltransferases catalyze the transfer of a methyl group via a methyl- cob(III)amide intermediate. These include MeTr, a functional heterodimer, and the folate binding domain of MetH.
Probab=26.52 E-value=3.9e+02 Score=24.45 Aligned_cols=101 Identities=16% Similarity=0.069 Sum_probs=57.5
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc-CCcEEEecCChhhHHHHHHHHHHcCCCCccccc
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHAENGDAVFEGQKRMIELGITGPEGHA 260 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~ 260 (427)
+...+...+++ +.|++.+.+...+. ..-..+++.+++...++. +.++.+=..+.+.++.+.+.+. |..-.....
T Consensus 26 d~~~~~A~~~~-~~GAdiIDIG~~~~--~~~~~ee~~r~v~~i~~~~~~piSIDT~~~~v~e~aL~~~~--G~~iINsIs 100 (252)
T cd00740 26 DEALDVARQQV-EGGAQILDLNVDYG--GLDGVSAMKWLLNLLATEPTVPLMLDSTNWEVIEAGLKCCQ--GKCVVNSIN 100 (252)
T ss_pred HHHHHHHHHHH-HCCCCEEEECCCCC--CCCHHHHHHHHHHHHHHhcCCcEEeeCCcHHHHHHHHhhCC--CCcEEEeCC
Confidence 34455566666 68998887765432 122356777776666654 8888887777666655544321 321111100
Q ss_pred ccCCHHHHHHHHHHHHHHHHhcCCCEEEEcC
Q 014320 261 LSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (427)
Q Consensus 261 ~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~ 291 (427)
.... .+...+.+.+++++++++.+.|.
T Consensus 101 ~~~~----~e~~~~~~~~~~~~~~~vV~m~~ 127 (252)
T cd00740 101 LEDG----EERFLKVARLAKEHGAAVVVLAF 127 (252)
T ss_pred CCCC----ccccHHHHHHHHHhCCCEEEecc
Confidence 0000 01234455667788999999997
No 352
>PF01116 F_bP_aldolase: Fructose-bisphosphate aldolase class-II; InterPro: IPR000771 Fructose-bisphosphate aldolase [, ] is a glycolytic enzyme that catalyses the reversible aldol cleavage or condensation of fructose-1,6-bisphosphate into dihydroxyacetone-phosphate and glyceraldehyde 3-phosphate. There are two classes of fructose-bisphosphate aldolases with different catalytic mechanisms. Class-II aldolases [], mainly found in prokaryotes and fungi, are homodimeric enzymes, which require a divalent metal ion, generally zinc, for their activity. This family also includes the Escherichia coli galactitol operon protein, gatY, which catalyses the transformation of tagatose 1,6-bisphosphate into glycerone phosphate and D-glyceraldehyde 3-phosphate; and E. coli N-acetyl galactosamine operon protein, agaY, which catalyses the same reaction. There are two histidine residues in the first half of the sequence of these enzymes that have been shown to be involved in binding a zinc ion [].; GO: 0008270 zinc ion binding, 0016832 aldehyde-lyase activity, 0005975 carbohydrate metabolic process; PDB: 3Q94_A 1RVG_B 1RV8_C 3C4U_A 3C56_B 3C52_A 2FJK_A 3N9R_P 3N9S_A 1GVF_B ....
Probab=25.71 E-value=1.8e+02 Score=27.28 Aligned_cols=19 Identities=26% Similarity=0.099 Sum_probs=11.2
Q ss_pred HHHHHHHhhcCCCEEEecC
Q 014320 297 MEEIAKARKAGQRVIGEPV 315 (427)
Q Consensus 297 ~~~i~~~~~~G~~v~~~~~ 315 (427)
.+.++.++..|+.|-+|.-
T Consensus 117 ~~vv~~ah~~gv~VEaElG 135 (287)
T PF01116_consen 117 REVVEYAHAYGVSVEAELG 135 (287)
T ss_dssp HHHHHHHHHTT-EEEEEES
T ss_pred HHHHHhhhhhCCEEEEEee
Confidence 3456667788866665544
No 353
>cd08209 RLP_DK-MTP-1-P-enolase 2,3-diketo-5-methylthiopentyl-1-phosphate enolase. Ribulose bisphosphate carboxylase like proteins (RLPs) similar to B. subtilis YkrW protein, have been identified as 2,3-diketo-5-methylthiopentyl-1-phosphate enolases. They catalyze the tautomerization of 2,3-diketo-5-methylthiopentane 1-phosphate (DK-MTP 1-P). This is an important step in the methionine salvage pathway in which 5-methylthio-D-ribose (MTR) derived from 5'-methylthioadenosine is converted to methionine.
Probab=25.13 E-value=5.9e+02 Score=25.09 Aligned_cols=109 Identities=14% Similarity=0.098 Sum_probs=55.4
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcCCCCC---cHHHHHHHHHHH----hccccceeceeccccCCChhhHHHHHHHHHH
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKK----AKNSCMDYGFHMAITKWDEVVSDEMEVMVKE 194 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 194 (427)
++++.+...+.....+|+=-+-|-..-.+. ...+.++...+. ..+.--...+...++...++..+..+... +
T Consensus 137 lsp~~~a~~~y~~~~GGvD~IKDDE~l~~q~~~p~~eRv~a~~~a~~~a~~eTG~~~~ya~NiT~~~~em~~ra~~~~-~ 215 (391)
T cd08209 137 LDLDDLAEQLREQALGGVDLIKDDEILFDNPLAPALERIRACRPVLQEVYEQTGRRTLYAVNLTGPVFTLKEKARRLV-E 215 (391)
T ss_pred CCHHHHHHHHHHHHhCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhCCcceEEEEcCCCHHHHHHHHHHHH-H
Confidence 467777777888899998888775432222 333333333222 21110011111122333344444445444 6
Q ss_pred cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
.|...+-+-.. ...-..++.+.+. .+.+++++.|...
T Consensus 216 ~G~~~~mv~~~-----~~G~~~l~~l~~~-~~~~lpIhaHra~ 252 (391)
T cd08209 216 AGANALLFNVF-----AYGLDVLEALASD-PEINVPIFAHPAF 252 (391)
T ss_pred hCCCEEEEecc-----ccchHHHHHHHhc-CcCCcEEEecCCc
Confidence 78776533221 2233445555543 3568899999543
No 354
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=25.06 E-value=5.7e+02 Score=23.88 Aligned_cols=110 Identities=10% Similarity=0.011 Sum_probs=57.4
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHHHH---HHHHHHHhccccceeceeccccCCChhhHHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAG---FEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVK 193 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 193 (427)
|..+.+.+....+..+..||..+.-.+..+.. +..+. ++...+... ..+.+-...+. ...++.++..+...
T Consensus 16 g~iD~~~l~~lv~~~~~~Gv~gi~v~GstGE~~~Ls~~Er~~l~~~~~~~~~-g~~pvi~gv~~-~~t~~ai~~a~~A~- 92 (294)
T TIGR02313 16 GDIDEEALRELIEFQIEGGSHAISVGGTSGEPGSLTLEERKQAIENAIDQIA-GRIPFAPGTGA-LNHDETLELTKFAE- 92 (294)
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHHHHhC-CCCcEEEECCc-chHHHHHHHHHHHH-
Confidence 45667777777788899999998866544332 22222 222222211 22222111111 22334444444443
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHH-HHHHHHHc-CCcEEEe
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSL-GALAMVH 234 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~a~~~-g~~v~~H 234 (427)
+.|++.+-+..-+ ....+++.+.+ ..+.++.. ++++.+.
T Consensus 93 ~~Gad~v~v~pP~--y~~~~~~~l~~~f~~ia~a~~~lpv~iY 133 (294)
T TIGR02313 93 EAGADAAMVIVPY--YNKPNQEALYDHFAEVADAVPDFPIIIY 133 (294)
T ss_pred HcCCCEEEEcCcc--CCCCCHHHHHHHHHHHHHhccCCCEEEE
Confidence 7899887543321 22235555554 44456666 7998887
No 355
>PRK15447 putative protease; Provisional
Probab=25.03 E-value=5.8e+02 Score=23.97 Aligned_cols=50 Identities=6% Similarity=-0.054 Sum_probs=28.2
Q ss_pred HHHHHHHHHHcCCCeEEEEEecCC-CccCCHHHHHHHHHHHHHcCCcEEEe
Q 014320 185 SDEMEVMVKEKGINSFKFFMAYKG-SFMINDELLIEGFKRCKSLGALAMVH 234 (427)
Q Consensus 185 ~~~~~~l~~~~g~~~ik~~~~~~~-~~~~~~~~l~~~~~~a~~~g~~v~~H 234 (427)
.+.+-..+...|++.|-+.....+ -..++.+++.++++.++++|+.+.+-
T Consensus 17 ~~~~~~~~~~~gaDaVY~g~~~~~~R~~f~~~~l~e~v~~~~~~gkkvyva 67 (301)
T PRK15447 17 VRDFYQRAADSPVDIVYLGETVCSKRRELKVGDWLELAERLAAAGKEVVLS 67 (301)
T ss_pred HHHHHHHHHcCCCCEEEECCccCCCccCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 344444443557776643221100 01357788888888888888777654
No 356
>PRK13663 hypothetical protein; Provisional
Probab=24.82 E-value=2.9e+02 Score=27.34 Aligned_cols=86 Identities=19% Similarity=0.123 Sum_probs=50.9
Q ss_pred cCCcEEEecCChhhHHHHHH-HHHHcCCCCcccccc------cCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHH
Q 014320 227 LGALAMVHAENGDAVFEGQK-RMIELGITGPEGHAL------SRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEE 299 (427)
Q Consensus 227 ~g~~v~~H~e~~~~~~~~~~-~l~~~G~~~~~~~~~------~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~ 299 (427)
.|++-.+|...++.++-.+. ...-+|-.+|+.|.. +........+-...-++....||.+|..++-+...
T Consensus 392 A~I~~~i~Lisp~~iepIq~LKt~~Lgs~nprLh~dEvLIALSisA~tn~~A~~Al~qL~~L~Gc~aH~t~il~~~D--- 468 (493)
T PRK13663 392 AGIDDEIHLISPEIIEPIQNLKTNHLGSRNPRLHTDEVLIALSISAATNPTAQRAMEQLGNLKGCEAHSTVILSDVD--- 468 (493)
T ss_pred cCCCccccccCHHHhhhHHHHhHHHhCCCCCCCCHHHHHHHHHHHhcCCHHHHHHHHhhhhccCCceeEeecCChhh---
Confidence 37777888877776655543 234567777777642 11111111121222233445689998888877654
Q ss_pred HHHHhhcCCCEEEecC
Q 014320 300 IAKARKAGQRVIGEPV 315 (427)
Q Consensus 300 i~~~~~~G~~v~~~~~ 315 (427)
...+|+.|+++++++.
T Consensus 469 e~~frkLGi~vT~eP~ 484 (493)
T PRK13663 469 ENVFRKLGINVTSDPK 484 (493)
T ss_pred HHHHHHcCCceecCcc
Confidence 3556778999998654
No 357
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=24.52 E-value=5.8e+02 Score=23.76 Aligned_cols=110 Identities=10% Similarity=-0.032 Sum_probs=58.0
Q ss_pred CCCChhhHHHHHHHHHc-CCceEEecCcCCCCC---cHHH---HHHHHHHHhccccceeceeccccC-CChhhHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALA-GGTTMHIDFVIPING---SLTA---GFEAYEKKAKNSCMDYGFHMAITK-WDEVVSDEMEVM 191 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~-~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l 191 (427)
+..+.+.+....+..+. .|+..+.-.+..+.. +..+ .++...+... ..+.+ ..+... ..++.++..+..
T Consensus 19 g~iD~~~~~~li~~l~~~~Gv~gi~v~GstGE~~~Ls~eEr~~~~~~~~~~~~-~~~~v--iagvg~~~t~~ai~~a~~a 95 (293)
T PRK04147 19 GQIDEQGLRRLVRFNIEKQGIDGLYVGGSTGEAFLLSTEEKKQVLEIVAEEAK-GKVKL--IAQVGSVNTAEAQELAKYA 95 (293)
T ss_pred CCcCHHHHHHHHHHHHhcCCCCEEEECCCccccccCCHHHHHHHHHHHHHHhC-CCCCE--EecCCCCCHHHHHHHHHHH
Confidence 45667777777888898 999999866543322 2222 2222222221 11111 112211 233444444444
Q ss_pred HHHcCCCeEEEEEecCCCccCCHHHHHH-HHHHHHHcCCcEEEec
Q 014320 192 VKEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHA 235 (427)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~a~~~g~~v~~H~ 235 (427)
. +.|++.+-+..-+ ....+++.+.+ ..+.+...++|+.+.-
T Consensus 96 ~-~~Gad~v~v~~P~--y~~~~~~~l~~~f~~va~a~~lPv~iYn 137 (293)
T PRK04147 96 T-ELGYDAISAVTPF--YYPFSFEEICDYYREIIDSADNPMIVYN 137 (293)
T ss_pred H-HcCCCEEEEeCCc--CCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 3 7899988654322 22234555444 4455666789998873
No 358
>PRK00912 ribonuclease P protein component 3; Provisional
Probab=24.28 E-value=70 Score=28.89 Aligned_cols=32 Identities=19% Similarity=0.047 Sum_probs=22.3
Q ss_pred ccccccccccCcCCCCChhhHHHHHHHHHcCCceEEe
Q 014320 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (427)
Q Consensus 107 ~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~ 143 (427)
|+|.|+|.... +..+ +....+.|.+.|...+.
T Consensus 3 ~~DlHvHt~~d--~~~~---~~e~i~~A~~~Gl~~i~ 34 (237)
T PRK00912 3 FYDLNVHAVPD--GYDT---VLRLISEASHLGYSGIA 34 (237)
T ss_pred ceEeccCCCCC--Ccch---HHHHHHHHHHCCCCEEE
Confidence 78999998422 3333 44447888889998776
No 359
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=24.23 E-value=5.7e+02 Score=23.60 Aligned_cols=32 Identities=13% Similarity=-0.112 Sum_probs=19.5
Q ss_pred CHHHHHHHHHHHHHcCCcEEEecCChhhHHHH
Q 014320 213 NDELLIEGFKRCKSLGALAMVHAENGDAVFEG 244 (427)
Q Consensus 213 ~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~ 244 (427)
..+.++.+.+.+++.|+++..-+.+...+...
T Consensus 76 g~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l 107 (266)
T PRK13398 76 GEEGLKILKEVGDKYNLPVVTEVMDTRDVEEV 107 (266)
T ss_pred HHHHHHHHHHHHHHcCCCEEEeeCChhhHHHH
Confidence 35666667777777777776665554444333
No 360
>PRK13404 dihydropyrimidinase; Provisional
Probab=24.03 E-value=7.6e+02 Score=24.95 Aligned_cols=40 Identities=15% Similarity=0.153 Sum_probs=29.1
Q ss_pred CHHHHHHHHHHHHHcCCcE-EEecCChhhHHHHHHHHHHcCC
Q 014320 213 NDELLIEGFKRCKSLGALA-MVHAENGDAVFEGQKRMIELGI 253 (427)
Q Consensus 213 ~~~~l~~~~~~a~~~g~~v-~~H~e~~~~~~~~~~~l~~~G~ 253 (427)
....+.+.++.|++.|.++ .+|+...+.++.. ..+.+.|+
T Consensus 219 E~~~v~~~~~la~~~g~~~hi~Hvs~~~~~~~i-~~~k~~g~ 259 (477)
T PRK13404 219 EREATHRAIALAELVDVPILIVHVSGREAAEQI-RRARGRGL 259 (477)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHH-HHHHHCCC
Confidence 4456788999999999999 6688877766444 44555664
No 361
>PTZ00310 AMP deaminase; Provisional
Probab=23.87 E-value=1.9e+02 Score=33.40 Aligned_cols=18 Identities=17% Similarity=0.189 Sum_probs=15.8
Q ss_pred HHHHHhcCCceEEecCCC
Q 014320 352 LQAALATGILQLVGTDHC 369 (427)
Q Consensus 352 l~~~l~~G~~~~lgSD~~ 369 (427)
+.++++.|+.++|+||..
T Consensus 1177 ~~~f~~~Gl~VSLnTDDP 1194 (1453)
T PTZ00310 1177 FPVFFHRGLNVSLSTDDP 1194 (1453)
T ss_pred HHHHHHCCCEEEECCCCc
Confidence 567999999999999974
No 362
>PF00016 RuBisCO_large: Ribulose bisphosphate carboxylase large chain, catalytic domain; InterPro: IPR000685 Ribulose bisphosphate carboxylase (RuBisCO) [, ] catalyses the initial step in Calvin's reductive pentose phosphate cycle in plants as well as purple and green bacteria. It consists of a large catalytic unit and a small subunit of undetermined function. In plants, the large subunit is coded by the chloroplastic genome while the small subunit is encoded in the nuclear genome. Molecular activation of RuBisCO by CO2 involves the formation of a carbamate with the epsilon-amino group of a conserved lysine residue. This carbamate is stabilised by a magnesium ion. One of the ligands of the magnesium ion is an aspartic acid residue close to the active site lysine [].; GO: 0000287 magnesium ion binding, 0016984 ribulose-bisphosphate carboxylase activity, 0015977 carbon fixation, 0009536 plastid; PDB: 3AXM_A 1WDD_A 3AXK_A 1SVD_A 1RXO_B 1UPP_C 1UPM_R 1RCO_L 8RUC_G 1RCX_B ....
Probab=23.67 E-value=6.4e+02 Score=23.94 Aligned_cols=111 Identities=13% Similarity=0.025 Sum_probs=59.8
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcCCCCC---cHHHHHHHHHHHh----ccccceeceeccccCCC-hhhHHHHHHHHH
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKA----KNSCMDYGFHMAITKWD-EVVSDEMEVMVK 193 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~ 193 (427)
++++.+...+.....+|+--+-|-..-.+. ...+.++...++. .+.--...+....+..+ ++..+..+...
T Consensus 27 lsp~~~a~~~y~~a~GG~D~IKDDE~l~~q~f~p~~eRv~~~~~a~~~a~~eTG~~~ly~~NiT~~~~~em~~ra~~a~- 105 (309)
T PF00016_consen 27 LSPEELAELAYEFALGGVDFIKDDENLANQPFCPFEERVPACMEAVDRAEEETGEKKLYAANITADTPDEMIERAEYAK- 105 (309)
T ss_dssp S-HHHHHHHHHHHHHTTSSEEEE-TT-SSBTTBEHHHHHHHHHHHHHHHHHHHSS--EEEEEE-SSSHHHHHHHHHHHH-
T ss_pred ecccchhhHHHhhhhcccceecccccccCcccccHhHhHHhhhhhhhccccccceecceecccccccHHHHHHhhhhhh-
Confidence 567788788888899999999876432221 3444333333222 11110111111222222 34444444444
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCCh
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~ 238 (427)
+.|+..+-+-. ....-..++.+.+.++..+++++.|....
T Consensus 106 ~~G~~~vmv~~-----~~~G~~~~~~l~~~~~~~~~~ih~H~A~~ 145 (309)
T PF00016_consen 106 EAGANAVMVNV-----LTAGFSALQSLAEDARDNGLPIHAHRAGH 145 (309)
T ss_dssp HHTGSEEEEEH-----HHHCHHHHHHHHHHHHHHTSEEEEETTTH
T ss_pred hhccchhhccc-----ccccccccchhhhhhcccceeeeeccccc
Confidence 67887664321 12345677888888888889999996543
No 363
>TIGR03234 OH-pyruv-isom hydroxypyruvate isomerase. This enzyme interconverts tartronate semi-aldehyde (TSA, aka 2-hydroxy 3-oxopropionate) and hydroxypyruvate. The E. coli enzyme has been characterized and found to be specific for TSA, contain no cofactors, and have a rather high Km for hydroxypyruvate of 12.5 mM. The gene is ofter found in association with glyoxalate carboligase (which produces TSA), but has been shown to have no effect on growth on glyoxalate when knocked out. This is consistent with the fact that the gene for tartronate semialdehyde reductase (glxR) is also associated and may have primary responsibility for the catabolism of TSA.
Probab=23.60 E-value=5.4e+02 Score=23.09 Aligned_cols=20 Identities=15% Similarity=0.100 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHhcCCCEEEE
Q 014320 270 EATTRAIRLAEFVNTPLYVV 289 (427)
Q Consensus 270 ~a~~~~~~~~~~~g~~~~i~ 289 (427)
+.+.+..+.+++.|+.+.+.
T Consensus 123 ~~l~~l~~~A~~~gi~l~lE 142 (254)
T TIGR03234 123 ENLRYAADALDRIGLTLLIE 142 (254)
T ss_pred HHHHHHHHHHHhcCCEEEEE
Confidence 45566667777788877776
No 364
>PRK08508 biotin synthase; Provisional
Probab=23.59 E-value=5.9e+02 Score=23.55 Aligned_cols=125 Identities=12% Similarity=0.046 Sum_probs=64.1
Q ss_pred CChhhHHHHHHHHHcCCceEEec--CcCCCCC-c---HHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHc
Q 014320 122 ETIDDFFSGQAAALAGGTTMHID--FVIPING-S---LTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEK 195 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d--~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 195 (427)
.++|.+...++.+...|++.+.- .+...+. . ..+.++..++..+. +. .+......+. +.++++. +.
T Consensus 40 ~s~eeI~~~a~~a~~~g~~~~~lv~sg~~~~~~~~e~~~ei~~~ik~~~p~--l~--i~~s~G~~~~---e~l~~Lk-~a 111 (279)
T PRK08508 40 KDIEQIVQEAKMAKANGALGFCLVTSGRGLDDKKLEYVAEAAKAVKKEVPG--LH--LIACNGTASV---EQLKELK-KA 111 (279)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEeccCCCCcccHHHHHHHHHHHHhhCCC--cE--EEecCCCCCH---HHHHHHH-Hc
Confidence 46788877778877889988752 2211111 1 22333333332211 11 1111111222 3455554 67
Q ss_pred CCCeEEEEEecC------CCccCCHHHHHHHHHHHHHcCCcEEEe-----cCChhhHHHHHHHHHHcCCC
Q 014320 196 GINSFKFFMAYK------GSFMINDELLIEGFKRCKSLGALAMVH-----AENGDAVFEGQKRMIELGIT 254 (427)
Q Consensus 196 g~~~ik~~~~~~------~~~~~~~~~l~~~~~~a~~~g~~v~~H-----~e~~~~~~~~~~~l~~~G~~ 254 (427)
|++.+..-+... -....+.+...+.++.|++.|+.+..+ -|+.+...+....+.+.+..
T Consensus 112 Gld~~~~~lEt~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~sg~I~GlGEt~ed~~~~l~~lr~L~~~ 181 (279)
T PRK08508 112 GIFSYNHNLETSKEFFPKICTTHTWEERFQTCENAKEAGLGLCSGGIFGLGESWEDRISFLKSLASLSPH 181 (279)
T ss_pred CCCEEcccccchHHHhcCCCCCCCHHHHHHHHHHHHHcCCeecceeEEecCCCHHHHHHHHHHHHcCCCC
Confidence 777665433221 011234566667788899999877554 35555555555556665543
No 365
>PRK00979 tetrahydromethanopterin S-methyltransferase subunit H; Provisional
Probab=23.59 E-value=4.7e+02 Score=24.75 Aligned_cols=64 Identities=13% Similarity=0.142 Sum_probs=39.2
Q ss_pred HHHHHHHHHcCCCe-EEEEEecCCCccCCHHHHHHHHHHHHH-cCCcEEEecCChhhHHHHHHHHHHcCCCCc
Q 014320 186 DEMEVMVKEKGINS-FKFFMAYKGSFMINDELLIEGFKRCKS-LGALAMVHAENGDAVFEGQKRMIELGITGP 256 (427)
Q Consensus 186 ~~~~~l~~~~g~~~-ik~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~ 256 (427)
+...++.+..|... +.++. -+.+.+.+.++...+ .++|+.+-..+.+..+...+++.+.|+.+.
T Consensus 59 ~~~~elsd~tg~p~~~~v~~-------~~~eam~k~I~~v~~~~d~Pl~IDSt~p~a~eaaLk~~~e~G~~gR 124 (308)
T PRK00979 59 NRQEELSDKTGNPALLDVVG-------ESPEAMEKYIDFVSEITDLPFLIDSTSPEARIAAAKYATELGLADR 124 (308)
T ss_pred HHHHHHHHHhCCCeEEEEec-------ChHHHHHHHHHHHHhcCCCCEEEeCCCHHHHHHHHHHhhhcCCCCc
Confidence 33444444456553 33332 356777777776655 568888887777777777666666665543
No 366
>PRK06886 hypothetical protein; Validated
Probab=23.29 E-value=6.4e+02 Score=24.13 Aligned_cols=104 Identities=11% Similarity=-0.018 Sum_probs=54.3
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCC---cEEEecCChhhHHHHHHHHHHcCCCCccc
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGA---LAMVHAENGDAVFEGQKRMIELGITGPEG 258 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~---~v~~H~e~~~~~~~~~~~l~~~G~~~~~~ 258 (427)
++.++.+.++.++.|. .+.+.++....+ ....+..+.+...+.|+ .+..|+-.-...
T Consensus 161 ~e~l~~~~~lA~~~g~-~Id~Hlde~~~~--~~~~le~l~~~~~~~Gl~grV~~sH~~~L~~~----------------- 220 (329)
T PRK06886 161 LEAMDILLDTAKSLGK-MVHVHVDQFNTP--KEKETEQLCDKTIEHGMQGRVVAIHGISIGAH----------------- 220 (329)
T ss_pred HHHHHHHHHHHHHcCC-CeEEeECCCCch--hHHHHHHHHHHHHHcCCCCCEEEEEeccccCc-----------------
Confidence 4556667777755654 344444433211 12345555555555554 556786332111
Q ss_pred ccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCC------------HHHHHHHHHHhhcCCCEEEec
Q 014320 259 HALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS------------MDAMEEIAKARKAGQRVIGEP 314 (427)
Q Consensus 259 ~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~------------~~~~~~i~~~~~~G~~v~~~~ 314 (427)
+.....+.+++.++.|+.+..+..++ ..++..++++++.|++|...+
T Consensus 221 ---------~~~~~~~~i~~La~agi~Vv~~P~snl~l~~~~~~~p~~rGv~pv~eL~~aGV~V~lGt 279 (329)
T PRK06886 221 ---------SKEYRYRLYQKMREADMMVIACPMAWIDSNRKEDLMPFHNALTPADEMIPEGITVALGT 279 (329)
T ss_pred ---------ChhhHHHHHHHHHHcCCeEEECchhhhhhccccccCcCCCCCCCHHHHHHCCCeEEEec
Confidence 01223445556666666544433321 234567889999999988644
No 367
>PLN02858 fructose-bisphosphate aldolase
Probab=23.03 E-value=9.8e+02 Score=28.13 Aligned_cols=71 Identities=15% Similarity=-0.002 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCC
Q 014320 214 DELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTP 285 (427)
Q Consensus 214 ~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~ 285 (427)
.+...-+...|++..+||.+|.......+.+ .+..+.|+.+.=.-.-..|-+-.....++..+++...|+.
T Consensus 1155 ~~~~~~~~~~a~~~~vpV~lHLDHg~~~~~i-~~ai~~Gf~SVM~DgS~l~~eeNi~~t~~vv~~Ah~~gv~ 1225 (1378)
T PLN02858 1155 IPLVSCCIAAAEQASVPITVHFDHGTSKHEL-LEALELGFDSVMVDGSHLSFTENISYTKSISSLAHSKGLM 1225 (1378)
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCHHHH-HHHHHhCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCE
Confidence 3334445556667777777776433333222 3334456543311122344444455556666666666543
No 368
>COG1809 (2R)-phospho-3-sulfolactate synthase (PSL synthase, CoM biosynthesis) [Coenzyme transport and metabolism]
Probab=22.40 E-value=5.7e+02 Score=22.96 Aligned_cols=15 Identities=13% Similarity=0.326 Sum_probs=10.6
Q ss_pred CCCCHHHHHHHHchh
Q 014320 408 GQISVTDYVRLTSTE 422 (427)
Q Consensus 408 ~~l~l~~~v~~~t~n 422 (427)
..++.+|++.+-|..
T Consensus 231 anip~~eii~LEtLR 245 (258)
T COG1809 231 ANIPFEEIIALETLR 245 (258)
T ss_pred cCCCHHHHHHHHHHH
Confidence 457888888777653
No 369
>TIGR03581 EF_0839 conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.
Probab=22.33 E-value=5.7e+02 Score=22.89 Aligned_cols=40 Identities=30% Similarity=0.312 Sum_probs=29.9
Q ss_pred HHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcE
Q 014320 189 EVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALA 231 (427)
Q Consensus 189 ~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v 231 (427)
..+++..|..++|.|--. | .-..++++.+.+.|.++|+.+
T Consensus 141 iaml~dmG~~SiKffPM~-G--l~~leE~~avA~aca~~g~~l 180 (236)
T TIGR03581 141 IAMLKDMGGSSVKFFPMG-G--LKHLEEYAAVAKACAKHGFYL 180 (236)
T ss_pred HHHHHHcCCCeeeEeecC-C--cccHHHHHHHHHHHHHcCCcc
Confidence 344447899999987421 1 236899999999999999873
No 370
>PRK12581 oxaloacetate decarboxylase; Provisional
Probab=22.23 E-value=8.3e+02 Score=24.75 Aligned_cols=180 Identities=16% Similarity=0.148 Sum_probs=99.0
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcCC--------CCCcHHHHHHHHHHHhccccceeceec----cccCCChhhHHHHH
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVIP--------INGSLTAGFEAYEKKAKNSCMDYGFHM----AITKWDEVVSDEME 189 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 189 (427)
...+++...+...-+.|+-++--.++. ...+-++.++..++..++..+..-..+ +....+++..+...
T Consensus 32 ~~t~d~l~ia~~ld~~G~~siE~wGGAtfd~~~rfl~edpwerlr~~r~~~~nt~lqmLlRG~n~vgy~~ypddvv~~fv 111 (468)
T PRK12581 32 LSIEDMLPVLTILDKIGYYSLECWGGATFDACIRFLNEDPWERLRTLKKGLPNTRLQMLLRGQNLLGYRHYADDIVDKFI 111 (468)
T ss_pred CCHHHHHHHHHHHHhcCCCEEEecCCcchhhhhcccCCCHHHHHHHHHHhCCCCceeeeeccccccCccCCcchHHHHHH
Confidence 345556555666666688877543221 112456677777776665444322221 22233455555555
Q ss_pred HHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEE---ecCCh----hhHHHHHHHHHHcCCCCcc---cc
Q 014320 190 VMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMV---HAENG----DAVFEGQKRMIELGITGPE---GH 259 (427)
Q Consensus 190 ~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~---H~e~~----~~~~~~~~~l~~~G~~~~~---~~ 259 (427)
+...++|++.+.+|-. ..+.+.++..++.+++.|..+.. +..++ +......+.+.+.|..... ..
T Consensus 112 ~~a~~~Gidi~Rifd~-----lnd~~n~~~ai~~ak~~G~~~~~~i~yt~sp~~t~~y~~~~a~~l~~~Gad~I~IkDta 186 (468)
T PRK12581 112 SLSAQNGIDVFRIFDA-----LNDPRNIQQALRAVKKTGKEAQLCIAYTTSPVHTLNYYLSLVKELVEMGADSICIKDMA 186 (468)
T ss_pred HHHHHCCCCEEEEccc-----CCCHHHHHHHHHHHHHcCCEEEEEEEEEeCCcCcHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 5544799999888753 23778899999999999986532 32222 2234444567777764321 11
Q ss_pred cccCCHHHHHHHHHHHHHHHHh-cCCCE-EEEcCCCHHHHHHHHHHhhcCCCEE
Q 014320 260 ALSRPPLLEGEATTRAIRLAEF-VNTPL-YVVHVMSMDAMEEIAKARKAGQRVI 311 (427)
Q Consensus 260 ~~~~p~~~e~~a~~~~~~~~~~-~g~~~-~i~H~~~~~~~~~i~~~~~~G~~v~ 311 (427)
....|.. +.+.+...++ .+.++ ..+|.+..-++.-.-.+-+.|+...
T Consensus 187 G~l~P~~-----v~~Lv~alk~~~~~pi~~H~Hnt~GlA~An~laAieAGad~v 235 (468)
T PRK12581 187 GILTPKA-----AKELVSGIKAMTNLPLIVHTHATSGISQMTYLAAVEAGADRI 235 (468)
T ss_pred CCcCHHH-----HHHHHHHHHhccCCeEEEEeCCCCccHHHHHHHHHHcCCCEE
Confidence 1223322 2223332222 34443 3466666666666666778898754
No 371
>cd03174 DRE_TIM_metallolyase DRE-TIM metallolyase superfamily. The DRE-TIM metallolyase superfamily includes 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. In addition, the catalytic site includes three invariant residues - an aspartate (D), an arginine (R), and a glutamate (E) - which is the basis for the domain name "DRE-TIM".
Probab=22.21 E-value=5.8e+02 Score=22.97 Aligned_cols=175 Identities=18% Similarity=0.094 Sum_probs=88.1
Q ss_pred ChhhHHHHHHHHHcCCceEEecCcCCCC------CcHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHcC
Q 014320 123 TIDDFFSGQAAALAGGTTMHIDFVIPIN------GSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKG 196 (427)
Q Consensus 123 ~~e~~~~~~~~~l~~GvTtv~d~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 196 (427)
+.+....-.....+.||..+--.+.... ....+.++...+...+ ..+.... . + ..+.++.+. +.|
T Consensus 17 s~e~~~~i~~~L~~~GV~~IEvg~~~~~~~~p~~~~~~~~i~~l~~~~~~--~~~~~l~---~-~--~~~~i~~a~-~~g 87 (265)
T cd03174 17 STEDKLEIAEALDEAGVDSIEVGSGASPKAVPQMEDDWEVLRAIRKLVPN--VKLQALV---R-N--REKGIERAL-EAG 87 (265)
T ss_pred CHHHHHHHHHHHHHcCCCEEEeccCcCccccccCCCHHHHHHHHHhccCC--cEEEEEc---c-C--chhhHHHHH-hCC
Confidence 4555555566777889887653222121 2344455555444321 1221111 1 1 133455555 678
Q ss_pred CCeEEEEEecCC---------CccCCHHHHHHHHHHHHHcCCcEEEecC-------ChhhHHHHHHHHHHcCCCCccc--
Q 014320 197 INSFKFFMAYKG---------SFMINDELLIEGFKRCKSLGALAMVHAE-------NGDAVFEGQKRMIELGITGPEG-- 258 (427)
Q Consensus 197 ~~~ik~~~~~~~---------~~~~~~~~l~~~~~~a~~~g~~v~~H~e-------~~~~~~~~~~~l~~~G~~~~~~-- 258 (427)
++.+.++..... ...-..+.+.+.++.+++.|+.+.+..+ +.+.+....+.+.+.|......
T Consensus 88 ~~~i~i~~~~s~~~~~~~~~~~~~~~~~~~~~~i~~a~~~G~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~i~l~D 167 (265)
T cd03174 88 VDEVRIFDSASETHSRKNLNKSREEDLENAEEAIEAAKEAGLEVEGSLEDAFGCKTDPEYVLEVAKALEEAGADEISLKD 167 (265)
T ss_pred cCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEeecCCCCCHHHHHHHHHHHHHcCCCEEEech
Confidence 888888775431 0001346677888899999998877752 3334555556677777543221
Q ss_pred -ccccCCHHHHHHHHHHHHHHHHh-cC-CCE-EEEcCCCHHHHHHHHHHhhcCCCEE
Q 014320 259 -HALSRPPLLEGEATTRAIRLAEF-VN-TPL-YVVHVMSMDAMEEIAKARKAGQRVI 311 (427)
Q Consensus 259 -~~~~~p~~~e~~a~~~~~~~~~~-~g-~~~-~i~H~~~~~~~~~i~~~~~~G~~v~ 311 (427)
.....| ..+.+.+...++ .+ .++ ..+|-...-++.-.-.+-+.|+..+
T Consensus 168 t~G~~~P-----~~v~~li~~l~~~~~~~~~~~H~Hn~~gla~an~laA~~aG~~~i 219 (265)
T cd03174 168 TVGLATP-----EEVAELVKALREALPDVPLGLHTHNTLGLAVANSLAALEAGADRV 219 (265)
T ss_pred hcCCcCH-----HHHHHHHHHHHHhCCCCeEEEEeCCCCChHHHHHHHHHHcCCCEE
Confidence 111222 223333333322 22 332 2344444444455555566787544
No 372
>PRK09248 putative hydrolase; Validated
Probab=22.20 E-value=5.8e+02 Score=22.94 Aligned_cols=19 Identities=16% Similarity=0.282 Sum_probs=15.4
Q ss_pred HHHHHHHHhcCCceEEecC
Q 014320 349 NKALQAALATGILQLVGTD 367 (427)
Q Consensus 349 ~~~l~~~l~~G~~~~lgSD 367 (427)
++.++.+.+.|...++|||
T Consensus 175 ~~~~~~~~~~g~~~~~gSD 193 (246)
T PRK09248 175 RAIAALCKKAGVWVALGSD 193 (246)
T ss_pred HHHHHHHHHcCCeEEEeCC
Confidence 4456667788999999999
No 373
>PF07071 DUF1341: Protein of unknown function (DUF1341); InterPro: IPR010763 Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.; PDB: 3NZR_D 3LM7_A 3M0Z_B 3M6Y_A 3N73_A 3MUX_A.
Probab=22.16 E-value=3.8e+02 Score=23.66 Aligned_cols=41 Identities=29% Similarity=0.244 Sum_probs=26.9
Q ss_pred HHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcE
Q 014320 188 MEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALA 231 (427)
Q Consensus 188 ~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v 231 (427)
...+++..|..++|.|--.. .-..++++.+.+.|.++|+.+
T Consensus 140 Aiaml~dmG~~SiKffPm~G---l~~leE~~avAkA~a~~g~~l 180 (218)
T PF07071_consen 140 AIAMLKDMGGSSIKFFPMGG---LKHLEELKAVAKACARNGFTL 180 (218)
T ss_dssp HHHHHHHTT--EEEE---TT---TTTHHHHHHHHHHHHHCT-EE
T ss_pred HHHHHHHcCCCeeeEeecCC---cccHHHHHHHHHHHHHcCcee
Confidence 33444478999999874221 246899999999999999987
No 374
>TIGR01856 hisJ_fam histidinol phosphate phosphatase HisJ family. This model represents the histidinol phosphate phosphatase HisJ of Bacillus subtilis, and related proteins from a number of species within a larger family of phosphatases in the PHP hydrolase family. HisJ catalyzes the penultimate step of histidine biosynthesis but shows no homology to the functionally equivalent sequence in E. coli, a domain of the bifunctional HisB protein. Note, however, that many species have two members and that Clostridium perfringens, predicted not to make histidine, has five members of this family; this family is designated subfamily rather than equivalog to indicate that members may not all act as HisJ.
Probab=21.99 E-value=98 Score=28.26 Aligned_cols=33 Identities=21% Similarity=0.214 Sum_probs=22.7
Q ss_pred cccccccccCcCCCCChhhHHHHHHHHHcCCceEEe
Q 014320 108 IDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (427)
Q Consensus 108 ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~ 143 (427)
+|.|+|......+..+.+ .-.++|.+.|.+.+.
T Consensus 1 ~D~H~Ht~~s~d~~~~~e---e~v~~A~~~Gl~~i~ 33 (253)
T TIGR01856 1 RDGHSHSPFCAHGTDTLE---EVVQEAIQLGFEEIC 33 (253)
T ss_pred CCcccCcCCCCCCCCCHH---HHHHHHHHcCCCEEE
Confidence 589999865423333444 447888999999876
No 375
>PRK00311 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed
Probab=21.98 E-value=4.7e+02 Score=24.19 Aligned_cols=49 Identities=24% Similarity=0.249 Sum_probs=34.4
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChh
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGD 239 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~ 239 (427)
++..+...+++++.|+..+|+ . +.+++.+.++.+.+.|++|..|. -+++
T Consensus 93 ~~av~~a~r~~~~aGa~aVki--E-------dg~~~~~~I~al~~agIpV~gHiGL~pq 142 (264)
T PRK00311 93 EQALRNAGRLMKEAGAHAVKL--E-------GGEEVAETIKRLVERGIPVMGHLGLTPQ 142 (264)
T ss_pred HHHHHHHHHHHHHhCCeEEEE--c-------CcHHHHHHHHHHHHCCCCEeeeecccce
Confidence 344566677775689999986 2 22456677777888999999996 4443
No 376
>TIGR01303 IMP_DH_rel_1 IMP dehydrogenase family protein. This model represents a family of proteins, often annotated as a putative IMP dehydrogenase, related to IMP dehydrogenase and GMP reductase and restricted to the high GC Gram-positive bacteria. All species in which a member is found so far (Corynebacterium glutamicum, Mycobacterium tuberculosis, Streptomyces coelicolor, etc.) also have IMP dehydrogenase as described by TIGRFAMs entry TIGR01302.
Probab=21.76 E-value=8.5e+02 Score=24.71 Aligned_cols=98 Identities=13% Similarity=0.045 Sum_probs=53.9
Q ss_pred HHHHHHHHcCCceEEe-cCcCCCCCcHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEec
Q 014320 128 FSGQAAALAGGTTMHI-DFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAY 206 (427)
Q Consensus 128 ~~~~~~~l~~GvTtv~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~ 206 (427)
.......+..|+..+. |.....+....+.++..++..+...+-. +. -...+...++. ..|++.+|+.+.+
T Consensus 227 ~~ra~~Lv~aGVd~i~~D~a~g~~~~~~~~i~~i~~~~~~~~vi~----g~----~~t~~~~~~l~-~~G~d~i~vg~g~ 297 (475)
T TIGR01303 227 GGKAKALLDAGVDVLVIDTAHGHQVKMISAIKAVRALDLGVPIVA----GN----VVSAEGVRDLL-EAGANIIKVGVGP 297 (475)
T ss_pred HHHHHHHHHhCCCEEEEeCCCCCcHHHHHHHHHHHHHCCCCeEEE----ec----cCCHHHHHHHH-HhCCCEEEECCcC
Confidence 3445667888998876 6544322245556666665433222211 11 11234566666 7899999976654
Q ss_pred CCC---------ccCCHHHHHHHHHHHHHcCCcEEEe
Q 014320 207 KGS---------FMINDELLIEGFKRCKSLGALAMVH 234 (427)
Q Consensus 207 ~~~---------~~~~~~~l~~~~~~a~~~g~~v~~H 234 (427)
... ......-+.++.+.++++++++..-
T Consensus 298 Gs~~ttr~~~~~g~~~~~a~~~~~~~~~~~~~~viad 334 (475)
T TIGR01303 298 GAMCTTRMMTGVGRPQFSAVLECAAEARKLGGHVWAD 334 (475)
T ss_pred CccccCccccCCCCchHHHHHHHHHHHHHcCCcEEEe
Confidence 211 1112344556666677777776554
No 377
>COG1679 Predicted aconitase [General function prediction only]
Probab=21.65 E-value=6.2e+02 Score=24.70 Aligned_cols=106 Identities=23% Similarity=0.218 Sum_probs=58.4
Q ss_pred ccCCHHHHHHHHHHHHHcCCcEEEecCC--hhh-------------H--HHHHHHHHH--cCCCCcccccccCCHHHHHH
Q 014320 210 FMINDELLIEGFKRCKSLGALAMVHAEN--GDA-------------V--FEGQKRMIE--LGITGPEGHALSRPPLLEGE 270 (427)
Q Consensus 210 ~~~~~~~l~~~~~~a~~~g~~v~~H~e~--~~~-------------~--~~~~~~l~~--~G~~~~~~~~~~~p~~~e~~ 270 (427)
...+.+.++.+-......|.....|+++ ++. + .+..+..++ .+...+.....++|..+ ..
T Consensus 225 ~~p~~d~lKalgAA~atsgavam~HvegvTPE~~~~~~~d~~e~i~i~~~d~~da~~~l~~~~~epdli~iGcPHaS-~~ 303 (403)
T COG1679 225 LFPSEDELKALGAAMATSGAVAMYHVEGVTPEARALAFGDKAEKIEIEREDIDDAWERLNTADGEPDLIALGCPHAS-LE 303 (403)
T ss_pred CCCCHHHHHHHHHHHhhcCceeEEEecCCCcccccccccccCceeeeeHHHHHHHHHHhhcCCCCCCEEEeCCCCCC-HH
Confidence 3458899999999888999999999754 222 0 011111222 33334455555555532 23
Q ss_pred HHHHHHHHHHhc----CCCEEEEcCCC--HHHHH--HHHHHhhcCCCEEEecCc
Q 014320 271 ATTRAIRLAEFV----NTPLYVVHVMS--MDAME--EIAKARKAGQRVIGEPVV 316 (427)
Q Consensus 271 a~~~~~~~~~~~----g~~~~i~H~~~--~~~~~--~i~~~~~~G~~v~~~~~p 316 (427)
.+.+.+++.+.. ++++.++--.. ..... .++.+++.|+.+..++|.
T Consensus 304 E~~~la~~l~~r~~~~~~~~~V~~sr~v~~~a~~~G~~~~le~~g~~vv~DtC~ 357 (403)
T COG1679 304 ELRRLAELLKGRKRPAGVPLYVTTSRAVYAQARKEGYLAKLEELGVKVVSDTCM 357 (403)
T ss_pred HHHHHHHHHhccCCCCCCCEEEEcCHHHHHHHhhhhhHHHHHHcCCEEecCcee
Confidence 344445544443 34444433211 11112 266677889999988885
No 378
>KOG3462 consensus Predicted membrane protein [Function unknown]
Probab=21.38 E-value=82 Score=23.64 Aligned_cols=22 Identities=27% Similarity=0.123 Sum_probs=14.2
Q ss_pred ChhhhhHHHHHHHHHHHHHHHH
Q 014320 1 MIHSMASAFTHQLTSVALLLLL 22 (427)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~ 22 (427)
||-||+++|.+..+..-+.+.+
T Consensus 41 mIfsmcGlM~r~KwCsWlAl~c 62 (105)
T KOG3462|consen 41 MIFSMCGLMFRLKWCSWLALYC 62 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 6789999998765543333333
No 379
>PRK09722 allulose-6-phosphate 3-epimerase; Provisional
Probab=21.26 E-value=6.1e+02 Score=22.84 Aligned_cols=45 Identities=13% Similarity=0.055 Sum_probs=26.0
Q ss_pred HHHHHHHHHcCCCeEEE-EEecCCCc--cCCHHHHHHHHHHHHHcCCcEEEec
Q 014320 186 DEMEVMVKEKGINSFKF-FMAYKGSF--MINDELLIEGFKRCKSLGALAMVHA 235 (427)
Q Consensus 186 ~~~~~l~~~~g~~~ik~-~~~~~~~~--~~~~~~l~~~~~~a~~~g~~v~~H~ 235 (427)
++++++. . |++.+.+ .|+.+..+ ++.++.++.+.+. .++++.+|.
T Consensus 19 ~el~~l~-~-g~d~lH~DiMDG~FVPN~tfg~~~i~~ir~~---t~~~~DvHL 66 (229)
T PRK09722 19 EQIEFLN-S-KADYFHIDIMDGHFVPNLTLSPFFVSQVKKL---ASKPLDVHL 66 (229)
T ss_pred HHHHHHH-h-CCCEEEEecccCccCCCcccCHHHHHHHHhc---CCCCeEEEE
Confidence 4455543 4 7777654 34444433 3456666655432 478899995
No 380
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A ....
Probab=20.94 E-value=2.3e+02 Score=27.15 Aligned_cols=49 Identities=20% Similarity=0.243 Sum_probs=30.4
Q ss_pred HHHHHHHHcCCCe--EEEEEecCCCccCCHHHHHHHHHHHHHcCCcE--EEec
Q 014320 187 EMEVMVKEKGINS--FKFFMAYKGSFMINDELLIEGFKRCKSLGALA--MVHA 235 (427)
Q Consensus 187 ~~~~l~~~~g~~~--ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v--~~H~ 235 (427)
++.++++.+|+.. ++++.+|.....++.+...++.+.|++.|+.+ ..|-
T Consensus 28 d~~~ilk~~G~N~vRlRvwv~P~~~g~~~~~~~~~~akrak~~Gm~vlldfHY 80 (332)
T PF07745_consen 28 DLFQILKDHGVNAVRLRVWVNPYDGGYNDLEDVIALAKRAKAAGMKVLLDFHY 80 (332)
T ss_dssp -HHHHHHHTT--EEEEEE-SS-TTTTTTSHHHHHHHHHHHHHTT-EEEEEE-S
T ss_pred CHHHHHHhcCCCeEEEEeccCCcccccCCHHHHHHHHHHHHHCCCeEEEeecc
Confidence 4555555788874 56666665534578889999999999999866 4564
No 381
>PRK07226 fructose-bisphosphate aldolase; Provisional
Probab=20.86 E-value=6.6e+02 Score=23.05 Aligned_cols=107 Identities=13% Similarity=0.076 Sum_probs=56.3
Q ss_pred ChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceec--eeccccCCChhhHHHHHHHHHHcCCCeE
Q 014320 123 TIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYG--FHMAITKWDEVVSDEMEVMVKEKGINSF 200 (427)
Q Consensus 123 ~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~g~~~i 200 (427)
..+++....+.++..|+.+++-.. . ................+.+. ..............++++.+ +.|++.+
T Consensus 37 ~~~d~~~~~~~a~~~~~~av~v~~----~-~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~ve~A~-~~Gad~v 110 (267)
T PRK07226 37 GLVDIRDTVNKVAEGGADAVLMHK----G-LARHGHRGYGRDVGLIVHLSASTSLSPDPNDKVLVGTVEEAI-KLGADAV 110 (267)
T ss_pred CcCCHHHHHHHHHhcCCCEEEeCH----h-HHhhhccccCCCCcEEEEEcCCCCCCCCCCcceeeecHHHHH-HcCCCEE
Confidence 345666668889999998887431 1 11111100011111111111 10100011133345567777 7899988
Q ss_pred EEEEecCCCc-cCCHHHHHHHHHHHHHcCCcEEEec
Q 014320 201 KFFMAYKGSF-MINDELLIEGFKRCKSLGALAMVHA 235 (427)
Q Consensus 201 k~~~~~~~~~-~~~~~~l~~~~~~a~~~g~~v~~H~ 235 (427)
++.+...... ..-.+++.++.+.++++|+++.++.
T Consensus 111 ~~~~~~g~~~~~~~~~~~~~v~~~~~~~g~pl~vi~ 146 (267)
T PRK07226 111 SVHVNVGSETEAEMLEDLGEVAEECEEWGMPLLAMM 146 (267)
T ss_pred EEEEecCChhHHHHHHHHHHHHHHHHHcCCcEEEEE
Confidence 8766543211 1124567788889999999998874
No 382
>TIGR01235 pyruv_carbox pyruvate carboxylase. This enzyme plays a role in gluconeogensis but not glycolysis.
Probab=20.73 E-value=1.3e+03 Score=26.49 Aligned_cols=150 Identities=17% Similarity=0.118 Sum_probs=84.3
Q ss_pred cHHHHHHHHHHHhccccceecee----ccccCCChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc
Q 014320 152 SLTAGFEAYEKKAKNSCMDYGFH----MAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL 227 (427)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~ 227 (427)
+-++.++.+++..++..+..-.. .+....+++..+...+...++|++.|.+|=.. .+-+.++..++.+++.
T Consensus 590 dPwerl~~~r~~~pn~~~qml~Rg~n~vgy~~ypd~vv~~f~~~~~~~GidifrifD~l-----N~~~n~~~~~~~~~~~ 664 (1143)
T TIGR01235 590 DPWERLEDLRKGVPNILFQMLLRGANGVGYTNYPDNVVKYFVKQAAQGGIDIFRVFDSL-----NWVENMRVGMDAVAEA 664 (1143)
T ss_pred CHHHHHHHHHHhCCCCceeeeeccccccCccCCCHHHHHHHHHHHHHcCCCEEEECccC-----cCHHHHHHHHHHHHHc
Confidence 44666777777666543332211 23344566677766665558999999887432 3678899999999999
Q ss_pred CCcEEEe-cCC------------hhhHHHHHHHHHHcCCCCcc---cccccCCHHHHHHHHHHHHHHH-HhcCCCEE-EE
Q 014320 228 GALAMVH-AEN------------GDAVFEGQKRMIELGITGPE---GHALSRPPLLEGEATTRAIRLA-EFVNTPLY-VV 289 (427)
Q Consensus 228 g~~v~~H-~e~------------~~~~~~~~~~l~~~G~~~~~---~~~~~~p~~~e~~a~~~~~~~~-~~~g~~~~-i~ 289 (427)
|..+..- |.+ .+......+.+.+.|..... .-....|.. +.+.+... ...+.+++ .+
T Consensus 665 g~~~~~~i~yt~~~~d~~~~~~~l~y~~~~ak~l~~~Gad~I~ikDt~Gll~P~~-----~~~Lv~~lk~~~~~pi~~H~ 739 (1143)
T TIGR01235 665 GKVVEAAICYTGDILDPARPKYDLKYYTNLAVELEKAGAHILGIKDMAGLLKPAA-----AKLLIKALREKTDLPIHFHT 739 (1143)
T ss_pred CCEEEEEEEEeccCCCcCCCCCCHHHHHHHHHHHHHcCCCEEEECCCcCCcCHHH-----HHHHHHHHHHhcCCeEEEEE
Confidence 9866433 211 22233344566777763221 111223332 22222222 22355543 35
Q ss_pred cCCCHHHHHHHHHHhhcCCCEE
Q 014320 290 HVMSMDAMEEIAKARKAGQRVI 311 (427)
Q Consensus 290 H~~~~~~~~~i~~~~~~G~~v~ 311 (427)
|-+...++...-.+.+.|+.++
T Consensus 740 Hdt~Gla~an~laA~eaGad~v 761 (1143)
T TIGR01235 740 HDTSGIAVASMLAAVEAGVDVV 761 (1143)
T ss_pred CCCCCcHHHHHHHHHHhCCCEE
Confidence 6666666666666778898865
No 383
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=20.64 E-value=6.7e+02 Score=23.06 Aligned_cols=32 Identities=13% Similarity=-0.030 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHcCCcEEEecCChhhHHHHH
Q 014320 214 DELLIEGFKRCKSLGALAMVHAENGDAVFEGQ 245 (427)
Q Consensus 214 ~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~ 245 (427)
++-|+-+.+..+++|+++.+...+...++...
T Consensus 59 eeGL~iL~~vk~~~glpvvTeV~~~~~~~~va 90 (258)
T TIGR01362 59 EEGLKILQKVKEEFGVPILTDVHESSQCEPVA 90 (258)
T ss_pred HHHHHHHHHHHHHhCCceEEEeCCHHHHHHHH
Confidence 45677777777778888888776665554443
No 384
>PRK08445 hypothetical protein; Provisional
Probab=20.39 E-value=7.8e+02 Score=23.72 Aligned_cols=122 Identities=14% Similarity=0.118 Sum_probs=69.9
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhh-----------HHHHHHHHHH
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDA-----------VFEGQKRMIE 250 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~-----------~~~~~~~l~~ 250 (427)
++..+.+++.. ..|+..+ ++.....+..+.+.+.++++..++..-.+.+|+-...+ .++..++|.+
T Consensus 76 eeI~~~~~~a~-~~g~~~i--~~~gg~~~~~~~e~~~~l~~~Ik~~~p~i~~~a~s~~ei~~~a~~~~~~~~e~L~~Lke 152 (348)
T PRK08445 76 EEIDKKIEELL-AIGGTQI--LFQGGVHPKLKIEWYENLVSHIAQKYPTITIHGFSAVEIDYIAKISKISIKEVLERLQA 152 (348)
T ss_pred HHHHHHHHHHH-HcCCCEE--EEecCCCCCCCHHHHHHHHHHHHHHCCCcEEEEccHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 44445555554 5677654 44433455678889999999998877668888644331 2455577889
Q ss_pred cCCCCccc-ccc---------cCCHHHHHHHHHHHHHHHHhcCCC----EEEEcCCC-HHHHHHHHHHhhc
Q 014320 251 LGITGPEG-HAL---------SRPPLLEGEATTRAIRLAEFVNTP----LYVVHVMS-MDAMEEIAKARKA 306 (427)
Q Consensus 251 ~G~~~~~~-~~~---------~~p~~~e~~a~~~~~~~~~~~g~~----~~i~H~~~-~~~~~~i~~~~~~ 306 (427)
.|+....+ -.. ..|.........+.++.+++.|.+ ..+.|..+ .+-++.+..+++.
T Consensus 153 AGl~~~~g~glE~~~d~v~~~~~pk~~t~~~~i~~i~~a~~~Gi~~~sg~i~G~~Et~edr~~~l~~lreL 223 (348)
T PRK08445 153 KGLSSIPGAGAEILSDRVRDIIAPKKLDSDRWLEVHRQAHLIGMKSTATMMFGTVENDEEIIEHWERIRDL 223 (348)
T ss_pred cCCCCCCCCceeeCCHHHHHhhCCCCCCHHHHHHHHHHHHHcCCeeeeEEEecCCCCHHHHHHHHHHHHHH
Confidence 99864321 111 112222222335677777777754 44556655 3344555555543
No 385
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=20.24 E-value=2.6e+02 Score=27.17 Aligned_cols=52 Identities=12% Similarity=0.227 Sum_probs=37.5
Q ss_pred hHHHHHHHHHHcCCCeEEEE---Ee--cCCCccCCHHHHHHHHHHHHHcCCcEEEec
Q 014320 184 VSDEMEVMVKEKGINSFKFF---MA--YKGSFMINDELLIEGFKRCKSLGALAMVHA 235 (427)
Q Consensus 184 ~~~~~~~l~~~~g~~~ik~~---~~--~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~ 235 (427)
.++.+++++++.|++.+-.. ++ .-+...+|-+.++++.+.|+++++++..-+
T Consensus 170 D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da 226 (471)
T COG3033 170 DLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDA 226 (471)
T ss_pred CHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeeh
Confidence 36778888877776643322 21 234455789999999999999999998874
No 386
>COG1038 PycA Pyruvate carboxylase [Energy production and conversion]
Probab=20.16 E-value=1.2e+03 Score=25.67 Aligned_cols=150 Identities=19% Similarity=0.208 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhcc----ccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCC
Q 014320 154 TAGFEAYEKKAKN----SCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGA 229 (427)
Q Consensus 154 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~ 229 (427)
++.++.+++..++ ..+.-.-..+....++...++..+...+.|++.|.+|=+.. .-+.|+-.++..++.|.
T Consensus 597 WeRL~~lRk~~PNvlfQMLLRgaN~VgY~nyPDnVi~~Fvkqaa~~GIDvFRiFDsLN-----wv~~M~vaidAV~e~gk 671 (1149)
T COG1038 597 WERLERLRKAVPNVLFQMLLRGANGVGYKNYPDNVIREFVKQAAKSGIDVFRIFDSLN-----WVEQMRVAIDAVREAGK 671 (1149)
T ss_pred HHHHHHHHHhCCchHHHHHhccccccCcCCCchHHHHHHHHHHHhcCccEEEeehhhc-----chhhhhhHHHHHHhcCC
Q ss_pred cEEEe-cCChhhHHHHH------------HHHHHcCC--CCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEE-EcCCC
Q 014320 230 LAMVH-AENGDAVFEGQ------------KRMIELGI--TGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYV-VHVMS 293 (427)
Q Consensus 230 ~v~~H-~e~~~~~~~~~------------~~l~~~G~--~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i-~H~~~ 293 (427)
.+-.- |.+.+...-.. +.+++.|. ++...-.-..-+. .+..-.-++-...+.++|+ .|=++
T Consensus 672 v~EatiCYTGDildp~r~kY~L~YY~~lA~el~~~GaHIlaIKDMAGLLKP~---AA~~Li~aLr~~~dlPIHlHTHDTs 748 (1149)
T COG1038 672 VAEATICYTGDILDPGRKKYTLDYYVKLAKELEKAGAHILAIKDMAGLLKPA---AAYRLISALRETVDLPIHLHTHDTS 748 (1149)
T ss_pred eEEEEEEeccccCCCCcccccHHHHHHHHHHHHhcCCcEEEehhhhhccCHH---HHHHHHHHHHHhcCCceEEeccCCC
Q ss_pred HHHHHHHHHHhhcCCCEE
Q 014320 294 MDAMEEIAKARKAGQRVI 311 (427)
Q Consensus 294 ~~~~~~i~~~~~~G~~v~ 311 (427)
..++.....+.++|+.++
T Consensus 749 G~~~at~~aA~~AGvDiv 766 (1149)
T COG1038 749 GNGVATYLAAVEAGVDIV 766 (1149)
T ss_pred ccHHHHHHHHHHcCCchh
No 387
>PF11068 YlqD: YlqD protein; InterPro: IPR021297 This bacterial family of proteins has no known function. ; PDB: 4DCI_C.
Probab=20.11 E-value=90 Score=25.41 Aligned_cols=14 Identities=29% Similarity=0.565 Sum_probs=12.9
Q ss_pred eeeEEEeCCeEEEe
Q 014320 70 IADVYVEDGIVVAV 83 (427)
Q Consensus 70 ~~~i~i~~g~I~~v 83 (427)
+..|+|+||+|.+|
T Consensus 117 ~~EIvvkDG~V~eI 130 (131)
T PF11068_consen 117 GVEIVVKDGKVIEI 130 (131)
T ss_dssp TEEEEEETTEEEEE
T ss_pred CcEEEEECCEEEEe
Confidence 68999999999987
No 388
>PF10509 GalKase_gal_bdg: Galactokinase galactose-binding signature; InterPro: IPR019539 This entry represents a highly conserved galactokinase signature sequence which appears to be present in all galactokinases, irrespective of how many other ATP binding sites, etc that they carry []. The function of this domain appears to be to bind galactose [], and it is normally located at the N terminus of these enzymes []. It is associated with IPR013750 from INTERPRO and IPR006204 from INTERPRO. While all enzymes in this entry posses galactokinase activity, some are annotated as N-acetylgalactosamine kinases as they also posses this enzyme activity.; PDB: 1PIE_A 1WUU_A 1S4E_D 2A2C_A 2A2D_A 2AJ4_A 2DEJ_A 2CZ9_A 2DEI_A 3V5R_A ....
Probab=20.03 E-value=48 Score=22.06 Aligned_cols=34 Identities=35% Similarity=0.462 Sum_probs=23.9
Q ss_pred EEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccc
Q 014320 73 VYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLA 115 (427)
Q Consensus 73 i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~ 115 (427)
++..=|||.=+|+. +|..|..|+|.-||..+.+.
T Consensus 15 ~~~APGRvnliGeH---------tDy~gG~Vl~~Ai~~~~~~a 48 (52)
T PF10509_consen 15 VASAPGRVNLIGEH---------TDYNGGFVLPAAIDLRTYVA 48 (52)
T ss_dssp EEEEEEEEEEE-TT----------GGGT-EEEEEEEEEEEEEE
T ss_pred EEECCceEEecCcc---------cccCCCeEEEEEeeccEEEE
Confidence 45555888777763 58999999999999887653
Done!