Query 014320
Match_columns 427
No_of_seqs 351 out of 2919
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 09:26:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014320.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014320hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dc8_A Dihydropyrimidinase; TI 100.0 5.1E-58 1.7E-62 460.8 34.0 370 54-426 2-372 (490)
2 3sfw_A Dihydropyrimidinase; hy 100.0 3.7E-54 1.3E-58 431.4 36.6 371 54-426 2-375 (461)
3 3e74_A Allantoinase; (beta/alp 100.0 4.6E-52 1.6E-56 416.5 32.5 362 50-426 20-391 (473)
4 2fty_A Dihydropyrimidinase; al 100.0 2.2E-51 7.6E-56 418.7 34.8 372 53-426 3-430 (559)
5 2ftw_A Dihydropyrimidine amido 100.0 9E-50 3.1E-54 405.1 34.3 375 52-426 7-384 (521)
6 3hm7_A Allantoinase; metallo-d 100.0 5.5E-50 1.9E-54 400.0 31.6 362 52-426 5-374 (448)
7 2vr2_A Dihydropyrimidinase; hy 100.0 4.4E-49 1.5E-53 401.7 34.1 375 52-426 26-407 (541)
8 1gkp_A Hydantoinase; hydrolase 100.0 1.3E-48 4.4E-53 391.1 34.5 370 55-426 2-373 (458)
9 3gri_A Dihydroorotase, dhoase; 100.0 1.1E-49 3.6E-54 394.9 26.0 355 55-426 2-359 (424)
10 2vm8_A Dihydropyrimidinase-rel 100.0 1E-46 3.5E-51 381.6 33.4 375 52-426 25-402 (501)
11 3mpg_A Dihydroorotase, dhoase; 100.0 6.5E-48 2.2E-52 382.8 23.4 355 54-426 2-360 (428)
12 1nfg_A D-hydantoinase; TIM bar 100.0 5.6E-45 1.9E-49 364.7 33.6 368 54-426 2-372 (457)
13 1gkr_A Hydantoinase, non-ATP d 100.0 4.7E-45 1.6E-49 365.2 31.6 363 53-426 2-371 (458)
14 2z00_A Dihydroorotase; zinc bi 100.0 7E-42 2.4E-46 339.0 28.6 351 55-426 2-362 (426)
15 2gwn_A Dihydroorotase; zinc-bi 100.0 1.2E-41 4E-46 340.0 26.0 355 53-426 4-371 (452)
16 3pnu_A Dihydroorotase; TIM bar 100.0 2.9E-42 9.8E-47 330.0 19.3 279 99-426 22-313 (359)
17 1xrt_A Dihydroorotase, dhoase; 100.0 4.6E-41 1.6E-45 337.1 27.9 354 52-426 46-404 (467)
18 2z26_A Dihydroorotase, dhoase; 100.0 3.2E-39 1.1E-43 310.5 18.4 287 99-426 4-302 (347)
19 3gip_A N-acyl-D-glutamate deac 100.0 3.8E-34 1.3E-38 287.5 26.7 324 51-426 5-411 (480)
20 4f0r_A 5-methylthioadenosine/S 100.0 7.7E-30 2.6E-34 254.1 24.4 313 50-426 3-354 (447)
21 1rk6_A D-aminoacylase; TIM bar 100.0 6.2E-30 2.1E-34 258.2 23.3 323 53-426 21-425 (496)
22 3lnp_A Amidohydrolase family p 100.0 5.6E-29 1.9E-33 249.4 30.0 312 51-426 21-381 (468)
23 3h4u_A Amidohydrolase; signatu 100.0 7.5E-29 2.6E-33 249.2 29.6 315 52-426 28-393 (479)
24 4dyk_A Amidohydrolase; adenosi 100.0 2.7E-29 9.4E-34 250.4 24.2 313 50-426 5-356 (451)
25 2paj_A Putative cytosine/guani 100.0 1E-28 3.4E-33 249.1 25.6 314 52-426 9-397 (492)
26 3gnh_A L-lysine, L-arginine ca 100.0 1.9E-29 6.6E-34 247.7 19.2 300 54-426 3-355 (403)
27 4dzh_A Amidohydrolase; adenosi 100.0 6E-29 2.1E-33 249.4 23.0 311 52-426 13-363 (472)
28 3ls9_A Triazine hydrolase; atr 100.0 3.4E-28 1.2E-32 242.7 27.5 311 55-426 2-374 (456)
29 2i9u_A Cytosine/guanine deamin 100.0 2.8E-28 9.7E-33 242.3 25.2 316 52-426 8-370 (439)
30 2r8c_A Putative amidohydrolase 100.0 4.1E-29 1.4E-33 247.3 18.1 307 52-426 3-362 (426)
31 3feq_A Putative amidohydrolase 100.0 2.1E-29 7.1E-34 249.0 15.7 303 52-426 3-359 (423)
32 1e9y_B Urease subunit beta; hy 100.0 9.6E-29 3.3E-33 251.0 20.7 311 52-426 65-416 (569)
33 2ood_A BLR3880 protein; PSI-II 100.0 3E-28 1E-32 244.5 21.3 323 53-426 3-388 (475)
34 3be7_A Zn-dependent arginine c 100.0 1.7E-27 5.7E-32 234.4 24.0 303 50-426 3-354 (408)
35 1ra0_A Cytosine deaminase; alp 100.0 2.3E-28 7.8E-33 242.3 14.1 315 52-426 7-364 (430)
36 2p9b_A Possible prolidase; pro 100.0 1.6E-27 5.5E-32 238.2 19.3 311 52-426 12-385 (458)
37 2imr_A Hypothetical protein DR 100.0 1.2E-27 4.1E-32 236.5 17.5 316 52-426 36-394 (420)
38 2qt3_A N-isopropylammelide iso 100.0 2.6E-26 8.9E-31 225.4 26.3 298 52-426 4-350 (403)
39 4aql_A Guanine deaminase; hydr 99.9 2.9E-26 1E-30 229.8 25.7 316 52-426 30-401 (476)
40 1p1m_A Hypothetical protein TM 99.9 4E-27 1.4E-31 231.6 19.1 290 55-426 1-324 (406)
41 2qs8_A XAA-Pro dipeptidase; am 99.9 4.1E-26 1.4E-30 225.3 23.7 301 52-426 6-365 (418)
42 2ics_A Adenine deaminase; TIM 99.9 9E-28 3.1E-32 233.8 11.5 298 52-426 4-314 (379)
43 2vun_A Enamidase; nicotinate d 99.9 9.8E-26 3.4E-30 220.1 23.8 291 53-426 2-317 (386)
44 2ogj_A Dihydroorotase; TIM bar 99.9 8.8E-27 3E-31 230.0 16.1 293 49-426 11-332 (417)
45 3v7p_A Amidohydrolase family p 99.9 3.5E-26 1.2E-30 226.2 17.1 309 55-426 2-350 (427)
46 1onw_A Isoaspartyl dipeptidase 99.9 1.3E-25 4.3E-30 219.7 19.8 306 53-426 8-339 (390)
47 2q09_A Imidazolonepropionase; 99.9 6.5E-25 2.2E-29 216.5 22.3 294 53-426 5-357 (416)
48 2puz_A Imidazolonepropionase; 99.9 5.5E-24 1.9E-28 210.0 25.3 294 52-426 14-369 (419)
49 2vhl_A N-acetylglucosamine-6-p 99.9 2.8E-26 9.7E-31 224.8 8.6 183 52-241 2-210 (396)
50 4f0l_A Amidohydrolase; ssgcid, 99.9 1.3E-24 4.3E-29 217.2 20.1 305 52-426 11-379 (458)
51 2bb0_A Imidazolonepropionase; 99.9 8.7E-24 3E-28 208.7 24.7 292 53-426 5-364 (421)
52 3nqb_A Adenine deaminase 2; PS 99.9 7.7E-24 2.6E-28 217.0 22.9 284 52-426 34-333 (608)
53 3mdu_A N-formimino-L-glutamate 99.9 3.8E-24 1.3E-28 213.3 19.7 299 57-426 4-371 (453)
54 4gy7_A Urease; JACK bean, hydr 99.9 1.3E-26 4.4E-31 243.0 1.5 171 52-241 336-526 (840)
55 3icj_A Uncharacterized metal-d 99.9 3.4E-25 1.2E-29 223.6 11.4 302 54-426 37-477 (534)
56 4ac7_C Urease subunit alpha; h 99.9 4.9E-24 1.7E-28 213.5 18.6 169 52-239 66-254 (570)
57 4ubp_C Protein (urease (chain 99.9 4.9E-24 1.7E-28 213.5 17.7 169 52-239 66-254 (570)
58 3hpa_A Amidohydrolase; signatu 99.9 4.2E-22 1.4E-26 198.9 28.4 315 52-426 28-393 (479)
59 4ep8_C Urease subunit alpha; a 99.9 3.7E-26 1.3E-30 234.0 -7.6 332 52-426 64-413 (566)
60 3ooq_A Amidohydrolase; structu 99.9 1E-22 3.5E-27 199.5 16.6 294 52-426 4-343 (396)
61 1yrr_A N-acetylglucosamine-6-p 99.9 2.7E-21 9.2E-26 188.4 16.4 187 55-255 2-213 (382)
62 3iv8_A N-acetylglucosamine-6-p 99.8 1.7E-19 5.7E-24 173.5 19.7 109 55-163 5-117 (381)
63 3mtw_A L-arginine carboxypepti 99.8 3.7E-18 1.3E-22 164.2 16.8 184 55-241 4-233 (403)
64 1o12_A N-acetylglucosamine-6-p 99.8 8.3E-19 2.8E-23 170.3 10.7 69 69-148 28-96 (376)
65 3mkv_A Putative amidohydrolase 99.7 9.7E-17 3.3E-21 155.0 19.6 66 52-117 3-71 (426)
66 3ggm_A Uncharacterized protein 99.6 2.1E-15 7.3E-20 112.2 8.5 66 52-117 3-73 (81)
67 1bf6_A Phosphotriesterase homo 99.4 2.1E-12 7.1E-17 120.5 16.8 255 106-426 6-289 (291)
68 2vc7_A Aryldialkylphosphatase; 99.2 3.3E-10 1.1E-14 106.8 14.7 263 106-426 17-312 (314)
69 2ob3_A Parathion hydrolase; me 99.1 1.8E-09 6.2E-14 102.3 17.9 270 106-426 16-323 (330)
70 1zzm_A Putative deoxyribonucle 99.0 1.8E-08 6E-13 92.1 17.8 240 107-426 5-255 (259)
71 3rcm_A TATD family hydrolase; 98.8 9.2E-08 3.1E-12 88.3 16.0 245 107-426 3-261 (287)
72 3k2g_A Resiniferatoxin-binding 98.8 5.2E-07 1.8E-11 86.1 19.7 244 128-426 89-351 (364)
73 2y1h_A Putative deoxyribonucle 98.8 1.3E-06 4.6E-11 80.1 21.7 237 106-426 5-262 (272)
74 3pnz_A Phosphotriesterase fami 98.8 1.1E-07 3.7E-12 89.5 14.4 261 106-426 17-325 (330)
75 1xwy_A DNAse TATD, deoxyribonu 98.7 9.6E-07 3.3E-11 80.7 18.3 245 107-426 5-259 (264)
76 3rhg_A Putative phophotriester 98.7 1.2E-06 4E-11 83.7 18.6 241 129-426 79-341 (365)
77 3gtx_A Organophosphorus hydrol 98.6 7.1E-07 2.4E-11 84.4 15.6 267 106-426 32-337 (339)
78 3ovg_A Amidohydrolase; structu 98.6 7.8E-07 2.7E-11 84.6 15.6 261 106-426 21-327 (363)
79 3tn4_A Phosphotriesterase; lac 98.6 1.8E-06 6.3E-11 81.9 17.7 171 199-426 177-357 (360)
80 3gg7_A Uncharacterized metallo 98.5 1.1E-06 3.7E-11 79.4 12.8 230 107-426 3-241 (254)
81 1yix_A Deoxyribonuclease YCFH; 98.5 5.2E-06 1.8E-10 75.7 17.6 123 107-236 3-132 (265)
82 4i6k_A Amidohydrolase family p 98.4 4.5E-06 1.5E-10 77.5 15.8 247 103-426 23-288 (294)
83 2gzx_A Putative TATD related D 98.4 9.9E-06 3.4E-10 73.8 16.3 125 107-237 2-131 (265)
84 3ipw_A Hydrolase TATD family p 98.4 1.1E-05 3.8E-10 75.3 16.4 256 106-426 27-319 (325)
85 3cjp_A Predicted amidohydrolas 98.3 2.6E-05 9E-10 71.3 16.5 159 182-426 101-261 (272)
86 1j6o_A TATD-related deoxyribon 98.3 5.3E-06 1.8E-10 75.9 11.4 238 106-426 12-262 (268)
87 2ffi_A 2-pyrone-4,6-dicarboxyl 98.3 8.9E-06 3E-10 75.1 12.9 125 106-237 13-146 (288)
88 3rys_A Adenosine deaminase 1; 98.3 3.5E-05 1.2E-09 72.7 17.0 152 195-425 163-316 (343)
89 2xio_A Putative deoxyribonucle 98.1 2.6E-05 8.9E-10 72.6 13.1 126 106-236 2-148 (301)
90 3pao_A Adenosine deaminase; st 98.1 1.6E-05 5.4E-10 74.6 11.5 152 195-425 160-313 (326)
91 2pgf_A Adenosine deaminase; me 98.0 5.6E-06 1.9E-10 79.4 6.8 139 214-425 214-354 (371)
92 4d9a_A 2-pyrone-4,6-dicarbaxyl 97.8 0.00044 1.5E-08 64.2 15.7 96 185-315 109-213 (303)
93 3iar_A Adenosine deaminase; pu 97.7 0.00045 1.5E-08 65.6 13.8 100 215-368 192-293 (367)
94 4do7_A Amidohydrolase 2; enzym 97.7 0.00016 5.3E-09 67.4 9.4 53 184-237 90-144 (303)
95 3guw_A Uncharacterized protein 97.5 0.0018 6.1E-08 58.6 13.9 164 107-316 2-182 (261)
96 2dvt_A Thermophilic reversible 97.1 0.00053 1.8E-08 64.2 6.3 55 183-237 108-167 (327)
97 3irs_A Uncharacterized protein 96.9 0.015 5.2E-07 53.4 13.7 55 182-237 105-160 (291)
98 2f6k_A Metal-dependent hydrola 96.9 0.0025 8.5E-08 59.0 8.2 55 182-237 103-157 (307)
99 4gxw_A Adenosine deaminase; am 96.5 0.012 4.1E-07 56.1 10.0 121 195-368 180-302 (380)
100 3e2v_A 3'-5'-exonuclease; stru 95.9 0.074 2.5E-06 50.7 12.0 130 105-236 12-204 (401)
101 2wm1_A 2-amino-3-carboxymucona 94.7 0.11 3.8E-06 48.5 9.2 55 182-237 123-177 (336)
102 2hbv_A 2-amino-3-carboxymucona 94.6 0.24 8.1E-06 46.2 11.2 54 182-237 127-180 (334)
103 2wje_A CPS4B, tyrosine-protein 94.5 0.32 1.1E-05 43.2 11.3 39 105-143 3-42 (247)
104 3lgd_A Adenosine deaminase CEC 94.2 0.075 2.6E-06 52.4 6.8 106 213-368 307-416 (508)
105 3qy7_A Tyrosine-protein phosph 93.2 0.6 2.1E-05 41.8 10.5 38 107-144 1-39 (262)
106 2a3l_A AMP deaminase, AMPD; at 93.2 0.031 1.1E-06 57.1 2.1 94 288-425 541-637 (701)
107 3ij6_A Uncharacterized metal-d 92.3 0.14 4.8E-06 47.4 5.1 55 182-237 110-164 (312)
108 3nur_A Amidohydrolase; TIM bar 90.7 0.79 2.7E-05 43.1 8.6 56 182-238 141-196 (357)
109 3lmz_A Putative sugar isomeras 85.6 4.7 0.00016 35.5 9.9 42 192-234 39-80 (257)
110 3aam_A Endonuclease IV, endoiv 85.5 18 0.00062 31.7 14.7 44 192-235 23-70 (270)
111 3p6l_A Sugar phosphate isomera 85.0 4.5 0.00015 35.7 9.5 41 194-234 33-82 (262)
112 2yxo_A Histidinol phosphatase; 84.5 20 0.0007 31.4 15.6 34 107-143 1-34 (267)
113 2gwg_A 4-oxalomesaconate hydra 83.4 3.1 0.00011 38.7 8.0 56 182-237 122-181 (350)
114 1aj0_A DHPS, dihydropteroate s 80.2 25 0.00086 31.5 12.4 119 182-314 38-186 (282)
115 1itu_A Renal dipeptidase; glyc 79.8 5.7 0.0002 37.3 8.2 112 282-426 211-333 (369)
116 1eye_A DHPS 1, dihydropteroate 79.1 27 0.00091 31.3 12.1 119 182-314 29-178 (280)
117 2q02_A Putative cytoplasmic pr 76.4 25 0.00086 30.7 11.4 18 215-232 85-102 (272)
118 1tx2_A DHPS, dihydropteroate s 75.9 45 0.0016 30.1 13.3 120 183-314 64-205 (297)
119 2nx9_A Oxaloacetate decarboxyl 74.8 30 0.001 33.5 11.9 107 129-240 104-213 (464)
120 2wqp_A Polysialic acid capsule 73.4 41 0.0014 31.1 12.0 33 212-244 88-120 (349)
121 3tva_A Xylose isomerase domain 73.1 49 0.0017 29.2 13.0 39 194-234 32-70 (290)
122 1qwg_A PSL synthase;, (2R)-pho 72.7 7.2 0.00025 34.2 6.3 37 195-233 37-73 (251)
123 3m5v_A DHDPS, dihydrodipicolin 72.0 28 0.00097 31.5 10.6 97 194-292 39-143 (301)
124 3fkr_A L-2-keto-3-deoxyarabona 71.4 14 0.00047 33.8 8.3 43 194-236 40-85 (309)
125 3ly0_A Dipeptidase AC. metallo 71.2 18 0.00063 33.7 9.1 114 282-425 225-349 (364)
126 3b40_A PVDM, probable dipeptid 71.0 17 0.00057 34.7 9.0 52 359-425 350-402 (417)
127 2i5g_A Amidohydrolase; NYSGXRC 70.7 21 0.00072 32.8 9.4 38 387-426 281-318 (325)
128 3b4u_A Dihydrodipicolinate syn 69.8 19 0.00064 32.6 8.8 43 194-236 35-80 (294)
129 3id7_A Dipeptidase; streptomyc 69.0 12 0.0004 35.5 7.4 53 359-425 311-364 (400)
130 3q94_A Fructose-bisphosphate a 68.9 46 0.0016 29.9 11.0 50 185-237 161-215 (288)
131 3a5f_A Dihydrodipicolinate syn 68.6 16 0.00056 32.9 8.1 44 194-237 33-79 (291)
132 3flu_A DHDPS, dihydrodipicolin 68.1 52 0.0018 29.6 11.4 97 194-292 39-142 (297)
133 4inf_A Metal-dependent hydrola 67.7 4.6 0.00016 38.1 4.4 55 183-238 160-214 (373)
134 3l21_A DHDPS, dihydrodipicolin 67.6 37 0.0013 30.8 10.3 97 194-292 47-150 (304)
135 1q7z_A 5-methyltetrahydrofolat 67.1 64 0.0022 32.1 12.7 122 183-315 341-475 (566)
136 2ojp_A DHDPS, dihydrodipicolin 66.3 16 0.00056 32.9 7.6 44 194-237 33-79 (292)
137 3s5o_A 4-hydroxy-2-oxoglutarat 65.3 21 0.00071 32.5 8.2 43 194-236 46-91 (307)
138 3daq_A DHDPS, dihydrodipicolin 65.3 47 0.0016 29.8 10.5 97 194-292 34-137 (292)
139 3dx5_A Uncharacterized protein 65.1 38 0.0013 29.8 9.9 52 183-235 48-105 (286)
140 3tak_A DHDPS, dihydrodipicolin 64.4 60 0.0021 29.0 11.1 97 194-292 33-136 (291)
141 3qze_A DHDPS, dihydrodipicolin 63.9 56 0.0019 29.7 10.8 97 194-292 55-158 (314)
142 1gvf_A Tagatose-bisphosphate a 63.7 63 0.0022 28.9 10.8 49 185-236 157-210 (286)
143 4dpp_A DHDPS 2, dihydrodipicol 63.5 24 0.00083 32.8 8.3 43 194-236 91-136 (360)
144 3na8_A Putative dihydrodipicol 62.7 49 0.0017 30.1 10.2 108 194-303 56-174 (315)
145 3si9_A DHDPS, dihydrodipicolin 62.5 51 0.0017 30.0 10.3 97 194-292 54-157 (315)
146 1twd_A Copper homeostasis prot 61.9 83 0.0028 27.6 12.4 118 131-253 14-142 (256)
147 1xky_A Dihydrodipicolinate syn 61.7 69 0.0024 28.9 11.0 97 194-292 44-147 (301)
148 3cpr_A Dihydrodipicolinate syn 61.7 87 0.003 28.2 11.6 97 194-292 48-151 (304)
149 2ehh_A DHDPS, dihydrodipicolin 61.6 66 0.0023 28.8 10.8 97 194-292 32-135 (294)
150 1rqb_A Transcarboxylase 5S sub 61.6 78 0.0027 31.2 11.9 108 128-240 120-232 (539)
151 2yxg_A DHDPS, dihydrodipicolin 61.3 71 0.0024 28.6 10.9 97 194-292 32-135 (289)
152 2ftp_A Hydroxymethylglutaryl-C 61.1 40 0.0014 30.5 9.2 54 183-239 159-214 (302)
153 2zds_A Putative DNA-binding pr 61.0 88 0.003 28.1 11.9 47 186-232 18-68 (340)
154 1f6y_A 5-methyltetrahydrofolat 60.9 83 0.0028 27.7 11.0 122 183-315 26-162 (262)
155 2hmc_A AGR_L_411P, dihydrodipi 60.4 64 0.0022 29.8 10.6 97 194-292 58-160 (344)
156 2r8w_A AGR_C_1641P; APC7498, d 59.9 69 0.0023 29.4 10.7 97 194-292 66-169 (332)
157 3qy7_A Tyrosine-protein phosph 59.7 15 0.0005 32.7 5.9 76 272-370 118-198 (262)
158 3d0c_A Dihydrodipicolinate syn 59.7 20 0.00069 32.7 7.0 44 194-237 44-90 (314)
159 1vli_A Spore coat polysacchari 59.6 50 0.0017 31.0 9.6 32 212-243 98-129 (385)
160 1n7k_A Deoxyribose-phosphate a 59.1 49 0.0017 28.7 8.9 111 120-237 31-142 (234)
161 1qtw_A Endonuclease IV; DNA re 58.7 92 0.0031 27.1 12.5 46 190-235 19-70 (285)
162 2wkj_A N-acetylneuraminate lya 58.3 81 0.0028 28.4 10.8 97 194-292 43-147 (303)
163 2yci_X 5-methyltetrahydrofolat 58.2 1E+02 0.0034 27.3 11.7 123 182-315 34-171 (271)
164 1f6k_A N-acetylneuraminate lya 58.1 77 0.0026 28.4 10.6 106 184-292 25-139 (293)
165 4dzi_A Putative TIM-barrel met 57.9 8.5 0.00029 36.9 4.3 56 182-238 175-234 (423)
166 1w3i_A EDA, 2-keto-3-deoxy glu 57.7 37 0.0013 30.5 8.4 43 194-236 31-73 (293)
167 2vc6_A MOSA, dihydrodipicolina 57.6 55 0.0019 29.4 9.5 97 194-292 32-135 (292)
168 1o5k_A DHDPS, dihydrodipicolin 57.3 70 0.0024 28.9 10.2 97 194-292 44-147 (306)
169 2v9d_A YAGE; dihydrodipicolini 56.9 77 0.0026 29.2 10.5 97 194-292 63-166 (343)
170 3rhg_A Putative phophotriester 56.0 97 0.0033 28.8 11.1 46 263-309 172-221 (365)
171 2rfg_A Dihydrodipicolinate syn 55.7 74 0.0025 28.6 10.0 97 194-292 32-135 (297)
172 3neh_A Renal dipeptidase famil 54.7 84 0.0029 28.6 10.2 51 361-426 257-307 (318)
173 3dz1_A Dihydrodipicolinate syn 54.7 1.1E+02 0.0037 27.7 11.0 109 194-304 40-159 (313)
174 3h5d_A DHDPS, dihydrodipicolin 54.5 90 0.0031 28.2 10.4 102 188-292 34-143 (311)
175 2pcq_A Putative dihydrodipicol 54.3 16 0.00054 32.8 5.2 41 194-236 30-70 (283)
176 3kws_A Putative sugar isomeras 53.5 1.1E+02 0.0038 26.7 11.0 43 187-235 42-85 (287)
177 2bdq_A Copper homeostasis prot 53.4 66 0.0023 27.6 8.6 57 194-253 87-147 (224)
178 2r91_A 2-keto-3-deoxy-(6-phosp 53.1 1.2E+02 0.0042 26.9 11.3 97 194-292 30-131 (286)
179 3e96_A Dihydrodipicolinate syn 52.6 48 0.0016 30.2 8.3 96 194-291 44-145 (316)
180 3aal_A Probable endonuclease 4 52.0 94 0.0032 27.6 10.2 47 188-235 24-74 (303)
181 3eb2_A Putative dihydrodipicol 51.9 43 0.0015 30.2 7.8 97 194-292 36-139 (300)
182 3qfe_A Putative dihydrodipicol 51.8 1.4E+02 0.0047 27.1 12.7 110 194-305 43-166 (318)
183 2x7v_A Probable endonuclease 4 49.9 1.3E+02 0.0043 26.2 10.7 47 188-235 18-70 (287)
184 2nuw_A 2-keto-3-deoxygluconate 49.1 1.3E+02 0.0046 26.7 10.6 97 194-292 31-132 (288)
185 1rvg_A Fructose-1,6-bisphospha 47.7 1.1E+02 0.0039 27.5 9.7 50 185-237 155-211 (305)
186 3qc0_A Sugar isomerase; TIM ba 47.6 64 0.0022 28.0 8.2 21 215-235 83-104 (275)
187 3mcm_A 2-amino-4-hydroxy-6-hyd 47.5 1.9E+02 0.0067 27.5 11.8 124 181-315 211-368 (442)
188 2isw_A Putative fructose-1,6-b 47.5 84 0.0029 28.6 8.8 101 131-237 91-213 (323)
189 1m65_A Hypothetical protein YC 46.9 11 0.00039 32.6 3.0 34 107-143 3-36 (245)
190 3n9r_A Fructose-bisphosphate a 46.2 1E+02 0.0035 27.8 9.2 50 185-237 157-213 (307)
191 2cw6_A Hydroxymethylglutaryl-C 45.9 93 0.0032 27.9 9.1 56 181-239 154-211 (298)
192 3obe_A Sugar phosphate isomera 45.7 1.6E+02 0.0056 26.1 12.4 113 187-317 40-173 (305)
193 3l21_A DHDPS, dihydrodipicolin 45.3 1.7E+02 0.0058 26.2 11.5 110 120-235 31-148 (304)
194 1i60_A IOLI protein; beta barr 44.8 57 0.0019 28.3 7.4 88 184-292 47-145 (278)
195 2h9a_B CO dehydrogenase/acetyl 44.0 1.8E+02 0.0063 26.2 13.6 125 184-315 76-209 (310)
196 3oa3_A Aldolase; structural ge 43.0 86 0.0029 28.1 8.0 101 120-226 69-173 (288)
197 3cqj_A L-ribulose-5-phosphate 42.2 1.7E+02 0.006 25.5 15.8 47 187-233 34-84 (295)
198 3vni_A Xylose isomerase domain 42.1 1.7E+02 0.0059 25.4 14.0 22 270-291 132-153 (294)
199 3flu_A DHDPS, dihydrodipicolin 41.9 1.9E+02 0.0065 25.8 12.6 110 120-235 23-140 (297)
200 2hk0_A D-psicose 3-epimerase; 41.9 1.8E+02 0.0063 25.6 13.5 46 187-235 41-86 (309)
201 3e96_A Dihydrodipicolinate syn 41.6 1.9E+02 0.0064 26.1 10.4 109 120-235 28-144 (316)
202 3tak_A DHDPS, dihydrodipicolin 41.1 1.9E+02 0.0066 25.6 11.8 110 120-235 17-134 (291)
203 3rcm_A TATD family hydrolase; 40.6 72 0.0025 28.5 7.4 42 264-307 108-149 (287)
204 3si9_A DHDPS, dihydrodipicolin 40.5 2.1E+02 0.0071 25.8 12.5 110 120-235 38-155 (315)
205 3g8r_A Probable spore coat pol 40.5 96 0.0033 28.6 8.2 33 212-244 75-107 (350)
206 3p6l_A Sugar phosphate isomera 40.4 1.7E+02 0.006 24.9 10.2 44 185-236 93-136 (262)
207 1ub3_A Aldolase protein; schif 40.3 41 0.0014 28.9 5.4 106 120-233 14-125 (220)
208 2yxg_A DHDPS, dihydrodipicolin 39.5 2E+02 0.0069 25.5 11.6 111 120-235 16-133 (289)
209 3kws_A Putative sugar isomeras 39.4 1.9E+02 0.0065 25.1 10.7 21 215-235 104-125 (287)
210 3qze_A DHDPS, dihydrodipicolin 38.9 2.2E+02 0.0075 25.7 11.5 110 120-235 39-156 (314)
211 3na8_A Putative dihydrodipicol 38.9 2.2E+02 0.0075 25.7 11.4 110 120-235 40-157 (315)
212 2rfg_A Dihydrodipicolinate syn 38.9 2.1E+02 0.0072 25.5 10.6 110 120-235 16-133 (297)
213 2v9d_A YAGE; dihydrodipicolini 38.8 2.3E+02 0.0079 25.9 11.7 110 120-235 47-164 (343)
214 2vc6_A MOSA, dihydrodipicolina 38.7 2.1E+02 0.0072 25.4 11.3 110 120-235 16-133 (292)
215 2ki0_A DS119; beta-alpha-beta, 38.7 24 0.00084 19.5 2.3 20 213-232 13-32 (36)
216 1nvm_A HOA, 4-hydroxy-2-oxoval 38.3 2.2E+02 0.0075 26.0 10.5 104 131-240 99-206 (345)
217 3fkr_A L-2-keto-3-deoxyarabona 38.1 2.2E+02 0.0076 25.5 10.7 112 120-235 24-144 (309)
218 3qfe_A Putative dihydrodipicol 37.6 2.3E+02 0.0079 25.6 10.4 110 120-235 27-146 (318)
219 2ojp_A DHDPS, dihydrodipicolin 37.5 2.1E+02 0.0072 25.4 10.0 110 120-235 17-134 (292)
220 2yb1_A Amidohydrolase; HET: AM 37.4 23 0.00078 31.9 3.5 33 107-143 3-35 (292)
221 3m5v_A DHDPS, dihydrodipicolin 37.2 2.3E+02 0.0077 25.3 12.0 112 120-235 23-141 (301)
222 1r30_A Biotin synthase; SAM ra 37.1 1.2E+02 0.0042 27.9 8.7 120 184-307 104-236 (369)
223 1xla_A D-xylose isomerase; iso 36.8 2.6E+02 0.0089 25.9 11.7 113 188-316 39-183 (394)
224 1yx1_A Hypothetical protein PA 36.8 2E+02 0.0069 24.6 10.5 21 215-235 84-105 (264)
225 2wkj_A N-acetylneuraminate lya 36.8 2.3E+02 0.0079 25.3 12.1 110 120-235 27-145 (303)
226 3eb2_A Putative dihydrodipicol 36.7 2.3E+02 0.0079 25.3 10.9 110 120-235 20-137 (300)
227 1o5k_A DHDPS, dihydrodipicolin 36.5 2.4E+02 0.008 25.3 10.7 110 120-235 28-145 (306)
228 2ehh_A DHDPS, dihydrodipicolin 36.2 2.3E+02 0.0079 25.1 12.0 111 120-235 16-133 (294)
229 1xky_A Dihydrodipicolinate syn 36.2 2.4E+02 0.008 25.2 12.3 110 120-235 28-145 (301)
230 3cny_A Inositol catabolism pro 36.1 2.2E+02 0.0074 24.8 10.4 22 270-291 141-162 (301)
231 2r8w_A AGR_C_1641P; APC7498, d 36.0 2.5E+02 0.0086 25.5 11.1 110 120-235 50-167 (332)
232 3n9r_A Fructose-bisphosphate a 35.9 1.8E+02 0.0061 26.3 9.0 105 181-287 26-132 (307)
233 2d73_A Alpha-glucosidase SUSB; 35.6 88 0.003 32.0 7.6 111 123-234 369-507 (738)
234 3cpr_A Dihydrodipicolinate syn 35.2 2.5E+02 0.0084 25.1 12.8 110 120-235 32-149 (304)
235 3bg3_A Pyruvate carboxylase, m 34.7 2.1E+02 0.0072 29.3 10.4 111 128-241 200-318 (718)
236 1f6k_A N-acetylneuraminate lya 34.7 2.4E+02 0.0083 25.0 11.7 111 120-235 19-137 (293)
237 3a5f_A Dihydrodipicolinate syn 34.3 2.2E+02 0.0074 25.3 9.5 108 122-235 19-134 (291)
238 4e38_A Keto-hydroxyglutarate-a 33.6 2E+02 0.0069 24.7 8.7 97 123-241 44-140 (232)
239 1ydo_A HMG-COA lyase; TIM-barr 33.1 1.6E+02 0.0055 26.5 8.5 56 182-240 156-213 (307)
240 1rvg_A Fructose-1,6-bisphospha 31.8 2E+02 0.0068 25.9 8.6 103 181-285 26-128 (305)
241 1v77_A PH1877P, hypothetical p 31.7 42 0.0014 28.5 4.1 51 355-426 156-206 (212)
242 3b4u_A Dihydrodipicolinate syn 31.6 2.8E+02 0.0094 24.6 12.5 110 120-235 19-140 (294)
243 3pm6_A Putative fructose-bisph 31.4 1.6E+02 0.0055 26.5 7.9 72 215-286 69-147 (306)
244 2l82_A Designed protein OR32; 31.1 1.6E+02 0.0055 21.8 9.5 15 298-312 94-108 (162)
245 3ngj_A Deoxyribose-phosphate a 31.0 1.4E+02 0.0049 25.8 7.3 111 120-238 38-152 (239)
246 3ipw_A Hydrolase TATD family p 30.7 1.8E+02 0.0062 26.4 8.4 94 212-307 74-190 (325)
247 3k2g_A Resiniferatoxin-binding 30.2 3.3E+02 0.011 25.1 12.8 45 264-309 184-230 (364)
248 4i6k_A Amidohydrolase family p 30.1 1.7E+02 0.0059 25.7 8.2 65 246-312 112-178 (294)
249 2y5s_A DHPS, dihydropteroate s 30.1 3E+02 0.01 24.6 12.3 120 182-314 46-194 (294)
250 3dz1_A Dihydrodipicolinate syn 30.0 3E+02 0.01 24.6 11.5 108 120-235 24-141 (313)
251 3iwp_A Copper homeostasis prot 29.9 3E+02 0.01 24.5 10.7 119 131-254 52-181 (287)
252 3lab_A Putative KDPG (2-keto-3 29.5 1.7E+02 0.0057 25.0 7.3 98 122-241 22-125 (217)
253 3s5o_A 4-hydroxy-2-oxoglutarat 29.4 3.1E+02 0.011 24.5 12.4 113 120-235 30-149 (307)
254 3b3d_A YTBE protein, putative 29.4 3.1E+02 0.011 24.5 12.4 110 124-234 64-177 (314)
255 3d0c_A Dihydrodipicolinate syn 29.3 3.1E+02 0.011 24.6 11.2 110 120-235 28-144 (314)
256 2anu_A Hypothetical protein TM 29.0 31 0.001 30.2 2.8 33 107-143 21-53 (255)
257 3qxb_A Putative xylose isomera 28.7 3E+02 0.01 24.2 14.3 47 188-234 40-89 (316)
258 3q94_A Fructose-bisphosphate a 28.4 3.2E+02 0.011 24.3 9.8 130 181-312 30-177 (288)
259 3elf_A Fructose-bisphosphate a 27.8 3.6E+02 0.012 24.8 9.8 53 185-237 184-255 (349)
260 3daq_A DHDPS, dihydrodipicolin 27.7 3.2E+02 0.011 24.2 11.7 107 123-235 21-135 (292)
261 1nvm_A HOA, 4-hydroxy-2-oxoval 27.7 3.5E+02 0.012 24.6 10.0 115 186-311 97-223 (345)
262 3o0f_A Putative metal-dependen 27.5 97 0.0033 27.9 5.9 33 107-143 14-46 (301)
263 3kdn_A Rubisco, ribulose bisph 27.4 3.9E+02 0.013 25.5 10.2 111 122-238 168-285 (444)
264 2inf_A URO-D, UPD, uroporphyri 26.9 2.2E+02 0.0074 26.1 8.4 48 188-238 199-254 (359)
265 2hnh_A DNA polymerase III alph 26.9 96 0.0033 32.8 6.5 56 104-164 3-61 (910)
266 2qul_A D-tagatose 3-epimerase; 26.7 3.1E+02 0.01 23.6 13.3 47 187-235 21-67 (290)
267 3nvt_A 3-deoxy-D-arabino-heptu 26.7 3.9E+02 0.013 24.9 10.6 118 183-312 156-282 (385)
268 2isw_A Putative fructose-1,6-b 26.5 3.4E+02 0.012 24.6 9.2 104 181-286 27-132 (323)
269 1gvf_A Tagatose-bisphosphate a 26.4 2.8E+02 0.0096 24.7 8.6 104 181-286 27-131 (286)
270 1ydn_A Hydroxymethylglutaryl-C 26.0 3.4E+02 0.012 23.9 12.3 81 227-311 71-172 (295)
271 1k77_A EC1530, hypothetical pr 25.8 3E+02 0.01 23.2 10.1 22 270-291 124-145 (260)
272 2r91_A 2-keto-3-deoxy-(6-phosp 25.3 3.5E+02 0.012 23.8 10.5 107 120-235 14-129 (286)
273 3hbl_A Pyruvate carboxylase; T 25.2 6.6E+02 0.023 27.3 12.8 124 128-254 630-762 (1150)
274 3fok_A Uncharacterized protein 24.5 1.1E+02 0.0036 27.7 5.4 47 187-234 133-182 (307)
275 4a29_A Engineered retro-aldol 24.4 2E+02 0.0067 25.3 6.9 50 188-243 119-168 (258)
276 3lmz_A Putative sugar isomeras 24.4 3.2E+02 0.011 23.1 11.2 103 127-237 32-135 (257)
277 1ydn_A Hydroxymethylglutaryl-C 24.1 3.7E+02 0.013 23.7 11.9 56 181-239 153-210 (295)
278 3h5d_A DHDPS, dihydrodipicolin 24.1 3.9E+02 0.013 23.9 12.1 110 120-235 23-141 (311)
279 2d69_A Ribulose bisphosphate c 24.0 4.7E+02 0.016 24.8 10.3 111 122-238 165-282 (430)
280 3q58_A N-acetylmannosamine-6-p 23.8 3.4E+02 0.012 23.1 11.7 107 123-241 34-142 (229)
281 1u83_A Phosphosulfolactate syn 23.6 1.2E+02 0.0042 26.8 5.5 35 195-233 64-98 (276)
282 3l23_A Sugar phosphate isomera 23.6 3.8E+02 0.013 23.5 11.9 117 187-316 33-168 (303)
283 2g0w_A LMO2234 protein; putati 23.5 2.6E+02 0.009 24.4 8.2 18 215-232 105-122 (296)
284 3k13_A 5-methyltetrahydrofolat 23.0 4.1E+02 0.014 23.8 9.2 101 182-291 37-141 (300)
285 3ngf_A AP endonuclease, family 23.0 3.5E+02 0.012 23.0 10.1 21 215-235 93-114 (269)
286 3igs_A N-acetylmannosamine-6-p 22.9 3.5E+02 0.012 23.0 11.9 112 124-253 35-150 (232)
287 3erp_A Putative oxidoreductase 22.5 4.4E+02 0.015 23.9 17.7 112 123-234 62-187 (353)
288 2ztj_A Homocitrate synthase; ( 22.5 4.4E+02 0.015 24.4 9.7 71 182-256 144-218 (382)
289 2nuw_A 2-keto-3-deoxygluconate 22.5 4E+02 0.014 23.5 11.4 110 120-235 15-130 (288)
290 2zvr_A Uncharacterized protein 22.5 2.7E+02 0.0092 24.2 8.0 45 186-235 44-89 (290)
291 2nx9_A Oxaloacetate decarboxyl 21.2 5.5E+02 0.019 24.6 17.0 176 125-311 30-230 (464)
292 4do7_A Amidohydrolase 2; enzym 21.2 4.1E+02 0.014 23.3 9.0 18 409-426 268-285 (303)
293 1zzm_A Putative deoxyribonucle 21.0 3.8E+02 0.013 22.7 8.7 39 268-308 112-150 (259)
294 3tr9_A Dihydropteroate synthas 20.7 4.7E+02 0.016 23.6 11.8 120 182-314 49-200 (314)
295 3u0h_A Xylose isomerase domain 20.4 2.5E+02 0.0085 24.1 7.3 15 217-231 86-100 (281)
296 3vnd_A TSA, tryptophan synthas 20.4 4.3E+02 0.015 23.1 13.5 22 184-206 34-55 (267)
297 3a24_A Alpha-galactosidase; gl 20.3 4.4E+02 0.015 26.4 9.5 111 123-239 307-430 (641)
298 4gie_A Prostaglandin F synthas 20.0 4.5E+02 0.015 23.1 11.1 107 124-234 37-146 (290)
No 1
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}
Probab=100.00 E-value=5.1e-58 Score=460.85 Aligned_cols=370 Identities=50% Similarity=0.857 Sum_probs=331.1
Q ss_pred cEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHHHH
Q 014320 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAA 133 (427)
Q Consensus 54 ~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~ 133 (427)
+++|+|++|+++++..+++|+|+||||++|++..+ +.++||++|++|+|||||+|+|+.++..+..+++++..++++
T Consensus 2 ~~~i~~~~v~~~~~~~~~~v~I~~G~I~~i~~~~~---~~~viD~~g~~v~PG~ID~H~H~~~~~~~~~~~e~~~~~~~a 78 (490)
T 3dc8_A 2 STVIKGGTIVTADLTYKADVKVEGGRIVEIGPNLS---GAETLDATGCYVMPGGIDPHTHLEMPFMGTYSSDDFESGTRA 78 (490)
T ss_dssp CEEEESCEEECSSCEEECEEEEETTEEEEEESSCC---CSEEEECTTCEEEECEEEEEECTTCEETTEECSCCHHHHHHH
T ss_pred cEEEEccEEECCCCceeeeEEEECCEEEEeccCCC---CCeEEECCCCEEecCEEeeccccCCCCCCCCCHHHHHHHHHH
Confidence 57999999999888778999999999999998643 568999999999999999999998874333688999999999
Q ss_pred HHcCCceEEecCcCCCCC-cHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecCCCccC
Q 014320 134 ALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMI 212 (427)
Q Consensus 134 ~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~ 212 (427)
++++||||++|+....+. ...+.++.+.+.+.+..+++.++.......++.++++.++.++.|+.++|+|+++.+.+.+
T Consensus 79 a~~~GvTtv~~~~~~~p~~~~~~~~~~~~~~a~~~~~d~~~~~~~~~~~~~~l~el~~l~~~~G~~~~k~~~~~~~~~~~ 158 (490)
T 3dc8_A 79 ALAGGTTMVVDFALPSPGQSLLEALTMWDNKSTRANCDYSFHMAITWWGEQVFNEMETIVKDKGINTFKHFMAYKGALMV 158 (490)
T ss_dssp HHHTTEEEEEEEECCC-CCCHHHHHHHHHHHTTTCSSEEEEEEECCSCSHHHHHHHHHHHHHSCCCEEEEESCSTTTTBC
T ss_pred HHHcCEEeecccCCCCCCcCHHHHHHHHHHHhhcccceeeeEEEEecCcHHHHHHHHHHHHhCCCCEEEEEecCCCCccC
Confidence 999999999998754433 5677777777776677888888877766666667888888756899999999999888888
Q ss_pred CHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 213 NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 213 ~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
++++++++++.++++|+++++|+|+.+.+....+.+...|..+++.|+..+|..+|..++.+.+.+++..++++|++|++
T Consensus 159 ~~~~l~~~~~~a~~~g~~v~~HaE~~~~i~~~~~~~~~~g~~~~~~~~~~rP~~~E~~av~r~i~la~~~g~~lhi~HvS 238 (490)
T 3dc8_A 159 DDDEMFSSFQRCAALGALPLVHAENGDVVAQLQAKLLAEGNSGPEAHAYSRPAEVEGEAANRAIMIADMAGCPVYIVHTS 238 (490)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSHHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEESSCC
T ss_pred CHHHHHHHHHHHHhcCCEEEEecCChHHHHHHHHHHHhcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCC
Confidence 99999999999999999999999999888777778888999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCC
Q 014320 293 SMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFN 372 (427)
Q Consensus 293 ~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~ 372 (427)
+.++++.++.+|++|++|++++||||++++++.+...+|..+..++++||+|++.++++||+++++|.+++++|||+|++
T Consensus 239 t~~~~~li~~ak~~G~~Vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~~Pplr~~~d~~aL~~~l~~G~id~i~sDh~p~~ 318 (490)
T 3dc8_A 239 CEQAHEAIRRARAKGMRVFGEPLIQHLTLDETEYFDKDWDHAARRVMSPPFRNKLHQDSLWAGLASGSLQVVATDHCAFT 318 (490)
T ss_dssp SHHHHHHHHHHHHTTCCEEECCBHHHHHCCGGGGGCSCHHHHHHTCCSSCCCCGGGHHHHHHHHHHTSSCCCBCCBCCCC
T ss_pred CHHHHHHHHHHHHCCCeEEEEEchHHheeCHHHhcCcCcccCCceEECCCCCChHHHHHHHHHHhcCCceEEECCCCCCC
Confidence 99999999999999999999999999999999886543332468899999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 373 STQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 373 ~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
...|..+.++|+.+++|++|+|+++|++|+.++..+++|++++++++|.|||++
T Consensus 319 ~~~K~~g~~~f~~~~~G~~gle~~l~~~~~~~v~~~~l~~~~~~~~~t~~~A~~ 372 (490)
T 3dc8_A 319 TEQKRFGVGDFTRIPNGTGGLEDRMPMLWTYGVATGRITMNEFVAVTSTNIAKI 372 (490)
T ss_dssp HHHHGGGTTCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHH
T ss_pred HHHhhccCCChhhCCCChHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 998877677999999999999999999998778899999999999999999985
No 2
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=100.00 E-value=3.7e-54 Score=431.36 Aligned_cols=371 Identities=46% Similarity=0.711 Sum_probs=324.5
Q ss_pred cEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHHHH
Q 014320 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAA 133 (427)
Q Consensus 54 ~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~ 133 (427)
+++|+|++|++++...+++|+|+||||++|++... +.+.++||++|++|+|||||+|+|+..++.+..+++++..+++.
T Consensus 2 ~~~i~n~~v~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~~~~~e~~~~~~~~ 80 (461)
T 3sfw_A 2 KKWIRNGTVVTASDTYQADVLIDGEKVVAIGSDLQ-ATDAEVIDATGYYLLPGGIDPHTHLDMPFGGTVTSDNFFTGTKA 80 (461)
T ss_dssp EEEEESCEEECSSCEEECEEEEETTEEEEEESCCC-CSSCEEEECTTCEEEECEEEEEECTTCEETTEECSCCHHHHHHH
T ss_pred cEEEECeEEECCCCcEEEEEEEECCEEEEEeCCCC-CCCCeEEECCCCEEEeeeEEeEeccCcCCCCcccHhHHHHHHHH
Confidence 47999999999887778999999999999998653 34678999999999999999999998765456678889999999
Q ss_pred HHcCCceEEecCcCCCCC-cHHHHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecCCCcc
Q 014320 134 ALAGGTTMHIDFVIPING-SLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFM 211 (427)
Q Consensus 134 ~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~ 211 (427)
++++||||++|+....+. ...+.++.+.... .+..++++++.......++.+++++++.++.|+.++|+++++.+.+.
T Consensus 81 ~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~~~ik~~~~~~~~~~ 160 (461)
T 3sfw_A 81 AAFGGTTSIVDFCLTSKGESLHSAIATWHEKARGKAVIDYGFHLMVSDANDHVLEELESVVNNEGITSLKVFMAYKNVLM 160 (461)
T ss_dssp HHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECSCCCHHHHHHHHHHHHTSCCCEEEEESSSTTTTB
T ss_pred HHhCCEEEEEccCCCCCcchHHHHHHHHHHHhhcCcEEEEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEEEEecCCCcc
Confidence 999999999998654333 5666666665554 35777887776666566777888999883389999999999877778
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcC
Q 014320 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (427)
Q Consensus 212 ~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~ 291 (427)
+++++++++++.|+++|+++.+|+++...+....+.+...|...+..|...+|..+|..++.+.+.+++..++++|++|+
T Consensus 161 ~~~~~l~~~~~~a~~~g~~v~~Hae~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~e~~av~~~~~la~~~g~~~hi~H~ 240 (461)
T 3sfw_A 161 ADDETLFKTLIRAKELGALVQVHAENGDVLDYLTKQALAEGNTDPIYHAYTRPPEAEGEATGRAIALTALADAQLYVVHV 240 (461)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHTTCEEEECSC
T ss_pred cCHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHhcCCCChhHhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEec
Confidence 89999999999999999999999999988888777888899999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCC
Q 014320 292 MSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF 371 (427)
Q Consensus 292 ~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~ 371 (427)
++.++++.++.+|++|++|++++||||++++++.+...++. +..++++||+|++.++++||+++++|++++++|||+|+
T Consensus 241 s~~~~l~~i~~ak~~G~~vt~e~~ph~l~l~~~~~~~~~~~-~~~~~~~Pplr~~~~~~aL~~~l~~G~~~~i~sD~~p~ 319 (461)
T 3sfw_A 241 SCADAVRRIAEAREKGWNVYGETCPQYLVLDITALEKPDFE-GAKYVWSPPLREKWNQDVLWSALKNGILQTVGSDHCPF 319 (461)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEECHHHHHCCGGGGGCTTTG-GGGGCCSSCCCCTHHHHHHHHHHHTTSSCEECCCBCCC
T ss_pred CcHHHHHHHHHHHhcCCcEEEeeccceEEEcHHHhcCcccc-CCcEEEcCCCCChHHHHHHHHHHhcCCceEEECCCCCC
Confidence 99999999999999999999999999999999987543222 36889999999999999999999999999999999999
Q ss_pred Ch-hhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 372 NS-TQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 372 ~~-~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+. ..|..+.++|+.+++|++|++++++.+++.++..++++++++++++|.|||++
T Consensus 320 ~~~~~k~~~~~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~ 375 (461)
T 3sfw_A 320 NFSGQKELGRRDFTKIPNGGPIIEDRMTILFSEGVRKGKISLNQFVDITSTKVAKL 375 (461)
T ss_dssp CTTTTGGGGTTCGGGSCCCBCCTTTHHHHHHHHTTTTTSSCHHHHHHHHTHHHHHH
T ss_pred CchhhhhcccCCHhhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHH
Confidence 84 44434456899999999999999999998788888999999999999999974
No 3
>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli}
Probab=100.00 E-value=4.6e-52 Score=416.50 Aligned_cols=362 Identities=27% Similarity=0.359 Sum_probs=300.9
Q ss_pred CCCccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHH
Q 014320 50 QSSSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFS 129 (427)
Q Consensus 50 ~~~~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~ 129 (427)
.|+.+++|+|++|++++...+++|+|+||||++|++.... ..++||++|++|+|||||+|+|+..+ +...++++.+
T Consensus 20 ~m~~~~~i~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~--~~~~id~~g~~v~PG~iD~H~H~~~~--g~~~~~~~~~ 95 (473)
T 3e74_A 20 HMSFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGD--AKEVMDASGLVVSPGMVDAHTHISEP--GRSHWEGYET 95 (473)
T ss_dssp --CEEEEEESCEEECSSCEEECEEEEETTEEEEEESCCCC--EEEEEECTTCEEEECEEEEEECC-----------CHHH
T ss_pred cCcCCEEEEeeEEECCCCceeeeEEEECCEEEEEcCCCCC--CCcEEECCCCEEecCEEEEecccCCC--CCCcHHHHHH
Confidence 3467899999999999887789999999999999986442 26899999999999999999999887 7778889999
Q ss_pred HHHHHHcCCceEEecCc-CCCCC-cHHHHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEec
Q 014320 130 GQAAALAGGTTMHIDFV-IPING-SLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAY 206 (427)
Q Consensus 130 ~~~~~l~~GvTtv~d~~-~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~ 206 (427)
.++.++++||||++|+. ...+. ...+.++...+.. ....+++.++...... .++++.++. ..|+.++|+|+++
T Consensus 96 ~~~~~~~~G~Tt~~~~~~~t~p~~~~~~~~~~~~~~a~~~~~~d~~~~~~~~~~---~~~~l~~l~-~~G~~~~K~~~~~ 171 (473)
T 3e74_A 96 GTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSY---NIDRLHELD-EVGVVGFKCFVAT 171 (473)
T ss_dssp HHHHHHHTTEEEEEECCSSSSSCSCSHHHHHHHHHHHTTTCSSEEEECEECCTT---CTTTHHHHH-HHTCSCEEEEC--
T ss_pred HHHHHHhCCEEEEEcCcccCCCCcccHHHHHHHHHHhccCCeEEEEEEeecccc---hHHHHHHHH-HcCCCEEEEeccc
Confidence 99999999999999997 44332 3445555544443 3467787776654432 245567776 6799999999874
Q ss_pred -------CCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHH
Q 014320 207 -------KGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLA 279 (427)
Q Consensus 207 -------~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~ 279 (427)
++.+.++++.++++++.++++|+++.+|+++...+..........|...++.|...+|..+|..++.+.+.++
T Consensus 172 ~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~l~la 251 (473)
T 3e74_A 172 CGDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLA 251 (473)
T ss_dssp ----------CCCCHHHHHHHHHHHHHHTCCEEEECSCHHHHHHHHHHHHHHTCCSHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred cCCcccccccCCCCHHHHHHHHHHHHhcCCeEEEEecCHHHHHHHhhHHHhcCCcChhhcccCCCHHHHHHHHHHHHHHH
Confidence 2445678999999999999999999999998876665556677789999999999999999999999999999
Q ss_pred HhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcC
Q 014320 280 EFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATG 359 (427)
Q Consensus 280 ~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G 359 (427)
++.++++|++|+++.++++.++++|++|++|++++||||++++++.+.. .+..++++||+|++.++++||+++++|
T Consensus 252 ~~~g~~lhi~Hvst~~~l~li~~ak~~G~~vt~e~~ph~l~l~~~~~~~----~~~~~~~~Pplr~~~~~~~L~~~l~~G 327 (473)
T 3e74_A 252 KVAGCRLHVCHVSSPEGVEEVTRARQEGQDITCESCPHYFVLDTDQFEE----IGTLAKCSPPIRDLENQKGMWEKLFNG 327 (473)
T ss_dssp HHHTCCEEECSCCSHHHHHHHHHHHHTTCCEEEEECTHHHHCCHHHHHH----HCGGGCCSSCCCCHHHHHHHHHHHHTT
T ss_pred HHhCCcEEEEeCCCHHHHHHHHHHHHcCCCeEEEEchHhhhcCHHHHhC----CCCcEEEeCCCCCHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999887743 136788999999999999999999999
Q ss_pred CceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 360 ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 360 ~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
++++|+|||+|++...|. .+|+.++.|++|++++++++++.++.+++++++++++++|.|||++
T Consensus 328 ~~~~i~tDh~p~~~~~k~---~~f~~~~~G~~g~e~~l~~~~~~~~~~~~~~~~~~~~~~t~~~a~~ 391 (473)
T 3e74_A 328 EIDCLVSDHSPCPPEMKA---GNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADI 391 (473)
T ss_dssp CCCEECCCBCCCCTTTTC---SCTTTSCCCBCCGGGHHHHHHHHHTTTTCCCHHHHHHHHTHHHHHH
T ss_pred CCcEEEeCCCCCCHHHcc---cChhhcCCCcccHHhHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHH
Confidence 999999999999998884 4899999999999999999997788889999999999999999985
No 4
>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A*
Probab=100.00 E-value=2.2e-51 Score=418.72 Aligned_cols=372 Identities=32% Similarity=0.524 Sum_probs=305.6
Q ss_pred ccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcC-CCCChhhHHHHH
Q 014320 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GSETIDDFFSGQ 131 (427)
Q Consensus 53 ~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g~~~~e~~~~~~ 131 (427)
++++|+|++|++++...+++|+|+||||++|++....+.+.++||++|++|+|||||+|+|+.++.. +..++++++.++
T Consensus 3 m~~li~n~~vv~~~~~~~~~v~I~~g~I~~Ig~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~e~~~~~~ 82 (559)
T 2fty_A 3 YDLIIKNGIICTASDIYAAEIAVNNGKVQLIAASIDPSLGSEVIDAEGAFITPGGIDAHVHVDEPLKLLGDVVDTMEHAT 82 (559)
T ss_dssp EEEEEESCEEECSSCEEECEEEEETTEEEEEESCCCGGGEEEEEECTTCEEEECEEECCBCCCCTTCTTSCCSCCHHHHH
T ss_pred ceEEEECcEEEcCCCceeeeEEEECCEEEEecCCCCCCCCCeEEeCCCCEEEcCEEeeccCcCccccccCCCHHHHHHHH
Confidence 4689999999998877789999999999999975432234579999999999999999999987631 233678888889
Q ss_pred HHHHcCCceEEecCcCCC---CC-c-HHHHHH-HHHHHhc-cccceeceeccccCC---Chh---hH-HHHHHHHHHcCC
Q 014320 132 AAALAGGTTMHIDFVIPI---NG-S-LTAGFE-AYEKKAK-NSCMDYGFHMAITKW---DEV---VS-DEMEVMVKEKGI 197 (427)
Q Consensus 132 ~~~l~~GvTtv~d~~~~~---~~-~-~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~---~~~---~~-~~~~~l~~~~g~ 197 (427)
+.++++||||++|+.... .. . ..+.+. ...+... +..++++++...... .++ .+ +++++++++.|+
T Consensus 83 ~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~g~~l~~~~~~l~~~~G~ 162 (559)
T 2fty_A 83 RSAVAGGTTTVVAFSTQDVSKKGPSALAESVKLDVDEYSEQTLYCDYGLHLILFQIEKPSVEARELLDVQLQAAYNDYGV 162 (559)
T ss_dssp HHHHHTTEEEEEEEEECCTTCCSTTHHHHHHHHHHHHHTTSCCSSEEEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHhCcEEEEEECcCcccCCcchHHHHHHHHHHHHHHHhhcceeEEEeeeeeccCcCCCchhhhhHHHHHHHHHHHCCC
Confidence 999999999999987543 22 2 334330 0022233 356677665443333 233 55 677777755699
Q ss_pred CeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHH
Q 014320 198 NSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIR 277 (427)
Q Consensus 198 ~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~ 277 (427)
..+|+++++++ ..+++++++++++.|+++|+++++|+++...+....+.+.+.|...++.|...+|...|..++.+.+.
T Consensus 163 ~~iki~~~~~~-~~~s~e~l~~~~~~A~~~g~~v~~H~e~~~~i~~~~~~~~~~G~~~~~~~~~~~p~~~E~~av~~~i~ 241 (559)
T 2fty_A 163 SSVKMFMTYPG-LQISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQGLTDAYYHGVSRPSIVEGEATNRAIT 241 (559)
T ss_dssp CEEEEESSSTT-TBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSTTHHHHTSCHHHHHHHHHHHHH
T ss_pred CEEEEEecCCC-CcCCHHHHHHHHHHHHhCCCEEEEECCChHHHHHHHHHHHhcCCCChhhcccCCCHHHHHHHHHHHHH
Confidence 99999998876 67899999999999999999999999988877776667788999999999999999999999999999
Q ss_pred HHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCccccc-------------------------C--CC
Q 014320 278 LAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLW-------------------------H--SD 330 (427)
Q Consensus 278 ~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~-------------------------~--~~ 330 (427)
+++..++++|++|+++.++++.++++++.|++|++++||+|++++++.+. . ++
T Consensus 242 la~~~g~~vhi~H~s~~~~~~~i~~ak~~G~~Vt~e~~p~~l~l~~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~ 321 (559)
T 2fty_A 242 LATTMDTPILFVHVSSPQAAEVIKQAQTKGLKVYAETCPQYALLSDAITRCHHHGEVESYGVGIDLSSISESPFTNPDDR 321 (559)
T ss_dssp HHHHTTCCEEECSCCCHHHHHHHHHHHHTTCCEEEEECHHHHHCCGGGGSCC--------CCSCCGGGCSSSTTTCTTCT
T ss_pred HHHHhCCCEEEEcCCCHHHHHHHHHHHHcCCceEEeecCcccccCHHHhhccccccccccccccCccccccccccccCcc
Confidence 99999999999999999889999999999999999999999999876651 0 11
Q ss_pred cccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhh-------------hcCCCCCccCCCCCchhhHhH
Q 014320 331 FVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQK-------------AFGIDDFRKIPNGVNGIEERM 397 (427)
Q Consensus 331 ~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~-------------~~~~~~~~~~~~G~~~~e~~l 397 (427)
+ .+..++++||+|++.++++||+++++|++++|||||+|++...| ..+.++|+.++.|++|+|+++
T Consensus 322 ~-~~~~~~~~PplR~~~~~~~l~~~l~~G~~~~igTD~~p~~~~~k~~~~~k~~~~~~~~~~~~~f~~~~~G~~g~e~~l 400 (559)
T 2fty_A 322 F-IGSKYICSPPIRPEGTQKSIWKGMNNGTFTIVGSDHCSYNYYEKTSTASKHRAFDPENNKNGEFRYIPNGLPGVCTRM 400 (559)
T ss_dssp T-GGGGGCCSSCCCCTTSHHHHHHHHHTTSCSEECCCBCCCBSSCCSSTTBGGGGEEGGGTEESCGGGSCCCBCCTTTHH
T ss_pred c-cccCcEECCCCCCHHHHHHHHHHHhcCceEEEEeCCCCCChhhccccccccccccccccccCCHhhCCCCCccHHHHH
Confidence 1 23677899999999999999999999999999999999987643 111248999999999999999
Q ss_pred HHHHHHHHhcCCC-CHHHHHHHHchhhhcC
Q 014320 398 HLVWDTMVESGQI-SVTDYVRLTSTEWGRL 426 (427)
Q Consensus 398 ~~~~~~~~~~~~l-~l~~~v~~~t~npA~~ 426 (427)
+++|..++..+.| +++++++++|.|||++
T Consensus 401 ~~ll~~~v~~~~l~~~~~~~~~~t~~~A~~ 430 (559)
T 2fty_A 401 PLLYDYGYLRGNLTSMMKLVEIQCTNPAKV 430 (559)
T ss_dssp HHHHHHTTTTTSSSCHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHhHHHHHH
Confidence 9999777888889 9999999999999985
No 5
>2ftw_A Dihydropyrimidine amidohydrolase; (beta-alpha)8-barrel, beta-sandwich; HET: KCX; 2.05A {Dictyostelium discoideum} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=9e-50 Score=405.14 Aligned_cols=375 Identities=54% Similarity=0.889 Sum_probs=316.7
Q ss_pred CccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHH
Q 014320 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQ 131 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~ 131 (427)
+.+++|+|++|++++...+++|+|+||||++|++....+.+.++||++|++|+|||||+|+|+..+..+..++++++.++
T Consensus 7 ~~~~lI~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~vIDa~G~~v~PGlID~H~H~~~~~~~~~~~e~~~~~~ 86 (521)
T 2ftw_A 7 TGTILIKNGTVVNDDRYFKSDVLVENGIIKEISKNIEPKEGIKVVDATDKLLLPGGIDTHTHFQLPFMGTVSVDDFDIGT 86 (521)
T ss_dssp CCCEEEESCEEECSSCEEECEEEEETTEEEEEESCCCCCSSCCEEECTTCEEEECEEEEEECTTCEETTEECSSCHHHHH
T ss_pred cCCEEEECcEEECCCCceeeeEEEECCEEEEecCCCCCCCCCeEEECCCCEEecCEEeeecccCcCCCCccCHHHHHHHH
Confidence 45789999999998777789999999999999986443345689999999999999999999987644445678888889
Q ss_pred HHHHcCCceEEecCcCCCC-CcHHHHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecCCC
Q 014320 132 AAALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGS 209 (427)
Q Consensus 132 ~~~l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~ 209 (427)
+.++++||||++|+..+.. ....+.++...... ....++++++.....+.++..+++.++.++.|+..+|+++++++.
T Consensus 87 ~~a~~~G~Ttv~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~g~h~~~~~~~~~~~~~l~~l~~~~G~~~~k~~~~~~~~ 166 (521)
T 2ftw_A 87 QAAVAGGTTFIIDFVIPTRGQSLLEAYDQWKKWADEKVNCDYSLHVAITWWSEQVSREMEILVKERGVNSFKCFMAYKNS 166 (521)
T ss_dssp HHHHHTTEEEEEEEECCCTTCCHHHHHHHHHHHHHTTCSSEEEEEEECCSCCHHHHHHHHHHHHHSCCCEEEEESSCTTT
T ss_pred HHHHhCCcceecCcCCCCCCcCHHHHHHHHHHHhhcCceeeEeeEEeecCCChhHHHHHHHHHHhCCCCEEEEEeccCCC
Confidence 9999999999999764332 24556666555443 235566777665555555666778887756799999999988777
Q ss_pred ccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEE
Q 014320 210 FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV 289 (427)
Q Consensus 210 ~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~ 289 (427)
..+++++++++++.|+++|+++++|+++...+....+.+.+.|++++.+|...+|...+..++.+.+.++...++++|++
T Consensus 167 ~~~~~e~l~~~~~~A~~~g~~v~vH~e~~~~~~~~~~~l~~~G~~~~~~h~~~~~~~~e~~a~~~~~~la~~~~~p~hi~ 246 (521)
T 2ftw_A 167 FMVTDQEMYHIFKRCKELGAIAQVHAENGDMVFEGQKKMLEMGITGPEGHELSRPEALEAEATNRAIVIADSVCTPVYIV 246 (521)
T ss_dssp TBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHHSCTHHHHHHHHHHHHHHHHHTCCEEEC
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHHcCCCChhhccccCcHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 78899999999999999999999999987766677788999999999999888999999989999999999999999999
Q ss_pred cCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCC-cccHHHHHHHHhcCCceEEecCC
Q 014320 290 HVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRA-SGHNKALQAALATGILQLVGTDH 368 (427)
Q Consensus 290 H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~-~~~~~~l~~~l~~G~~~~lgSD~ 368 (427)
|+++...++.++++++.|+.+++++||+++.++...+...+|..+..++++||+|+ +.++++||+++.+|.++++||||
T Consensus 247 h~ss~~~~~~i~~~r~~G~~v~~e~~~~~L~~d~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~g~~~~~gsD~ 326 (521)
T 2ftw_A 247 HVQSIGAADVICKHRKEGVRVYGEPIAAGLGVDGSHMWNHDWRHAAAFVMGPPIRPDPRTKGVLMDYLARGDLDCVGTDN 326 (521)
T ss_dssp SCCCHHHHHHHHHHHHTTCCEEECCBHHHHHCCGGGGGCSSHHHHHTTCCSSCCCCCTTHHHHHHHHHHHTSSCCCBCCB
T ss_pred ecCcHHHHHHHHHHHHcCCeEEEEEcchhhccCHHHhcCCCcccCcceEEcCCCCCChhhHHHHHHHhcCCCEEEEEeCC
Confidence 99998888999999999999999999999999887664433322345678999998 78899999999999999999999
Q ss_pred CCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 369 CAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 369 ~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+|++...|....++|..++.|++|++++++.+|..+++.++++++++++++|.|||++
T Consensus 327 ~~~~~~~k~~~~~~~~~~p~G~~G~e~~l~~~~~~~v~~~~l~~~~~~~~~t~~~A~~ 384 (521)
T 2ftw_A 327 CTFCADQKAMGKDDFTKIPNGVNGVEDRMSIVWENGVNTGKLTWCQFVRATSSERARI 384 (521)
T ss_dssp CCCCHHHHGGGTTCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHH
T ss_pred CCCCHHHhhcccCChhhCCCCCccHHHHHHHHHHHHHhcCCCCHHHHHHHhChhHHHH
Confidence 9999877765556899999999999999999998788888999999999999999984
No 6
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=100.00 E-value=5.5e-50 Score=399.98 Aligned_cols=362 Identities=26% Similarity=0.353 Sum_probs=308.1
Q ss_pred CccEEEECcEEEcCCCceeeeEEEeCCeEEEeeC--CCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHH
Q 014320 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQP--NINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFS 129 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~--~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~ 129 (427)
+++++|+|++|+++++..+++|+|+||||++|++ ..+ +.+.++||++|++|+|||||+|+|+..+ +..+.+++..
T Consensus 5 ~~~~~i~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~~-~~~~~~id~~g~~v~PG~ID~H~H~~~~--~~~~~~~~~~ 81 (448)
T 3hm7_A 5 RFDLIIRSSTVVTETTTYRADVAIRNGIVSAITEPGSIS-SDDGPAIDGTGLHLFPGMVDVHVHFNEP--GRTEWEGFAS 81 (448)
T ss_dssp CCSEEEEEEEEECSSCEEEEEEEEETTEEEEEESTTCSC-TTSSCEEECTTCEEEECEEEEEECCCTT--TSGGGCCSHH
T ss_pred cccEEEEeeEEECCCCceEeEEEEECCEEEEeeCccCCC-CCCCeEEECCCCEEecCEEEeeeccCCC--CCCcHhHHHH
Confidence 4679999999999887778999999999999998 433 3457899999999999999999999877 5556677888
Q ss_pred HHHHHHcCCceEEecCc-CCCCC-cHHHHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEec
Q 014320 130 GQAAALAGGTTMHIDFV-IPING-SLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAY 206 (427)
Q Consensus 130 ~~~~~l~~GvTtv~d~~-~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~ 206 (427)
..+.++++|||+++++. ...+. ...+.++...+.. ....+++.++.+..... .+++.++. +.|+.++|+++++
T Consensus 82 ~~~~~~~~Gvtt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~l~-~~g~~~~~~~l~~ 157 (448)
T 3hm7_A 82 GSKSLAAGGVTTYFDMPLNSNPPTITREELDKKRQLANEKSLVDYRFWGGLVPGN---IDHLQDLH-DGGVIGFKAFMSE 157 (448)
T ss_dssp HHHHHHTTTEEEEEECSSSSSSCSCSHHHHHHHHTHHHHHCSSEEEEEEECCTTC---GGGHHHHH-HTTCSEEEEESSS
T ss_pred HHHHHHhCCEEEEEeCCCCCCCCCChHHHHHHHHHHhccCCeeEEEEEEEecccC---HHHHHHHH-HcCCCEEEEeecc
Confidence 88999999999999986 43322 3344444444333 23566776665544322 45567776 5899999999987
Q ss_pred CCC---ccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcC
Q 014320 207 KGS---FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVN 283 (427)
Q Consensus 207 ~~~---~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g 283 (427)
... ...+++.++++++.|+++|+++.+|+++...+....+.+...|......|+.++|..+|..++.+.+.++++.+
T Consensus 158 ~~~~~~~~~~~~~l~~~l~~a~~~g~~v~vH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~~~la~~~g 237 (448)
T 3hm7_A 158 CGTDDFQFSHDETLLKGMKKIAALGSILAVHAESNEMVNALTTIAIEEQRLTVKDYSEARPIVSELEAVERILRFAQLTC 237 (448)
T ss_dssp CSSSSSCCCCHHHHHHHHHHHHHHTCCEEEECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCccCcCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCcChhhccccCCHHHHHHHHHHHHHHHHHhC
Confidence 543 44589999999999999999999999998877776777888999999999999999999999999999999999
Q ss_pred CCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceE
Q 014320 284 TPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQL 363 (427)
Q Consensus 284 ~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~ 363 (427)
++++++|+++.+.++.+++++++|++|++++||||++++++.+.. .+..++++||+|.+.+++.||+++++|++++
T Consensus 238 ~~~~i~H~s~~~~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~----~~~~~~~~Pplr~~~~~~~l~~~l~~g~~~~ 313 (448)
T 3hm7_A 238 CPIHICHVSSRKVLKRIKQAKGEGVNVSVETCPHYLLFSLDEFAE----IGYLAKCAPPLRERQEVEDLWDGLMAGEIDL 313 (448)
T ss_dssp CCEEECCCCCHHHHHHHHHHHHTTCCEEEEECHHHHHCCHHHHHH----HCSTTCCSSCCCCHHHHHHHHHHHHHTCCCE
T ss_pred CCEEEEeCCCHHHHHHHHHHHhcCCCEEEEechHHHccCHHHhcC----CCCeEEEcCCCCCHHHHHHHHHHHhcCCccE
Confidence 999999999999999999999999999999999999999887642 1367889999999999999999999999999
Q ss_pred EecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 364 VGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 364 lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
++|||+|++...|.. .+|+.++.|++|++++++.+++.++..++++++++++++|.|||++
T Consensus 314 i~tD~~p~~~~~k~~--~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~~~~~~t~~~A~~ 374 (448)
T 3hm7_A 314 ISSDHSPSLPQMKTG--KTIFEVWGGIAGCQNTLAVMLTEGYHKRKMPLTQIVQLLSTEPAKR 374 (448)
T ss_dssp ECCCBCCCCGGGGCC--SSTTTSCCCBCCTTTHHHHHHHHTTTTTCCCHHHHHHHHTHHHHHH
T ss_pred EEeCCCCCCHHHccc--CCHhhCCCCCccHHHHHHHHHHHHHhcCCcCHHHHHHHHhHHHHHH
Confidence 999999999888854 2699999999999999999997778788999999999999999974
No 7
>2vr2_A Dihydropyrimidinase; hydantoinase, metal-binding, disease mutation, dihydropyrimi amidohydrolase, nucleotide metabolism, DPYS, dhpase, hydrolase; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.4e-49 Score=401.72 Aligned_cols=375 Identities=51% Similarity=0.871 Sum_probs=312.9
Q ss_pred CccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCc----eEEeCCCCEEeccccccccccccCcCCCCChhhH
Q 014320 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDV----KVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDF 127 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~----~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~ 127 (427)
+.+++|+|++|++++...+++|+|+||||++||+....+.+. ++||++|++|+|||||+|+|+..+..+..+++++
T Consensus 26 ~~~~lI~ng~Vv~~~~~~~~dV~I~dGrI~~Ig~~~~~~~~~~~~~~vIDa~G~~V~PG~ID~H~Hl~~~~~~~~~~e~~ 105 (541)
T 2vr2_A 26 PSRLLIRGGRVVNDDFSEVADVLVEDGVVRALGHDLLPPGGAPAGLRVLDAAGKLVLPGGIDTHTHMQFPFMGSRSIDDF 105 (541)
T ss_dssp -CEEEEESCEEECSSCEEECEEEEETTEEEEEEC-----------CEEEECTTSEEEECEEEEEECTTCBCSSSBCSCCT
T ss_pred cCCEEEECcEEEcCCCceEeeEEEECCEEEEeccCCCCCcccccCceEEECCCCEEccCEEEecccCCCCCCCCcCHHHH
Confidence 367999999999987767799999999999999864322222 7999999999999999999998875444567788
Q ss_pred HHHHHHHHcCCceEEecCcCCCC-CcHHHHHHHHHHHhc-cccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEe
Q 014320 128 FSGQAAALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMA 205 (427)
Q Consensus 128 ~~~~~~~l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~ 205 (427)
+.+++.++++||||++|+..+.. ....+.++....... ...++++++.....+.++..+++++++++.|+..+|++++
T Consensus 106 ~~~~~~al~~GvTtv~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~g~h~~~~~~~~~~~~el~~l~~~~G~~~~k~~~~ 185 (541)
T 2vr2_A 106 HQGTKAALSGGTTMIIDFAIPQKGGSLIEAFETWRSWADPKVCCDYSLHVAVTWWSDQVKEEMKILVQDKGVNSFKMFMA 185 (541)
T ss_dssp THHHHHHHTTTEEEEEEEECCCTTCCHHHHHHHHHHHHTTTCSSEEEEEEEECSCSHHHHHHHHHHHHTSCCCEEEEESS
T ss_pred HHHHHHHHhCCeeeeccccCCCCCCCHHHHHHHHHHHhccCceEEEeeeecccCCCHHHHHHHHHHHHhCCCCEEEEEec
Confidence 88899999999999999864432 245566666555442 3556677665555555666777888775579999999999
Q ss_pred cCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCC
Q 014320 206 YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTP 285 (427)
Q Consensus 206 ~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~ 285 (427)
+++.+.+++++++++++.|+++|+++++|+|+...+....+.+.+.|++++++|...+|...+..++.+++.++...+++
T Consensus 186 ~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~h~~~~~~~~e~~a~~~~~~la~~~~~p 265 (541)
T 2vr2_A 186 YKDLYMVTDLELYEAFSRCKEIGAIAQVHAENGDLIAEGAKKMLALGITGPEGHELCRPEAVEAEATLRAITIASAVNCP 265 (541)
T ss_dssp STTTTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHHTCC
T ss_pred cCCccCCCHHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHHcCCCChhhccccchhHHHHHHHHHHHHHHHHhCCC
Confidence 88888889999999999999999999999998877667778899999999999988899999999999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCC-cccHHHHHHHHhcCCceEE
Q 014320 286 LYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRA-SGHNKALQAALATGILQLV 364 (427)
Q Consensus 286 ~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~-~~~~~~l~~~l~~G~~~~l 364 (427)
+++.|+++...++.++.+++.|+.|+++++|+++.++...+....|..+..++++||+|+ +.+++.||+++.+|+++++
T Consensus 266 ~~~~h~ss~~~~~~i~~ar~~G~~v~~e~~~~~L~~d~~~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~g~~~~~ 345 (541)
T 2vr2_A 266 LYIVHVMSKSAAKVIADARRDGKVVYGEPIAASLGTDGTHYWNKEWHHAAHHVMGPPLRPDPSTPDFLMNLLANDDLTTT 345 (541)
T ss_dssp EEEEEECCHHHHHHHHHHHHTTCCEEEEEBHHHHHCCSGGGGCSSHHHHHTTCCSSCCCSCTTHHHHHHHHHHTTSSCCC
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCeEEEEeehhhhcCCHHHhcCccccccCceEECCCCCCCcchHHHHHHHHhcCCeEEE
Confidence 999999998888999999999999999999999988877654333333345678999998 6789999999999999999
Q ss_pred ecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 365 GTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 365 gSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
||||.|++...|....++|..++.|++|++++++.+|..+++.++++++++++++|.||||+
T Consensus 346 gtD~~~~~~~~k~~~~~~~~~~p~G~~G~e~~l~~~~~~~v~~~~l~~~~~~~~~T~~pA~~ 407 (541)
T 2vr2_A 346 GTDNCTFNTCQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMDENRFVAVTSTNAAKI 407 (541)
T ss_dssp BCCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHH
T ss_pred EeCCCCCChHHhcccCCChhhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHH
Confidence 99999999888876667899999999999999999998788888899999999999999985
No 8
>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A*
Probab=100.00 E-value=1.3e-48 Score=391.11 Aligned_cols=370 Identities=36% Similarity=0.622 Sum_probs=308.8
Q ss_pred EEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHHHHH
Q 014320 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAA 134 (427)
Q Consensus 55 ~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~~ 134 (427)
++|+|++|++++...+++|+|+||||++|++....+.+.++||++|++|+|||||+|+|+.+++.+..++++++.+++.+
T Consensus 2 ~li~n~~vv~~~~~~~~~v~I~~g~I~~ig~~~~~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~ 81 (458)
T 1gkp_A 2 LLIKNGEIITADSRYKADIYAEGETITRIGQNLEAPPGTEVIDATGKYVFPGFIDPHVHIYLPFMATFAKDTHETGSKAA 81 (458)
T ss_dssp EEEESCEEEETTEEEECEEEESSSBCCEEESCCCCCTTCEEEECTTSEEEECEEEEEECSSCEETTEECSCCHHHHHHHH
T ss_pred EEEEeeEEECCCCceEeeEEEECCEEEEecCCCCCCCCCeEEECCCCEEecCEEecccCCCcCCCCCcCHhHHHHHHHHH
Confidence 68999999998766788999999999999986433345689999999999999999999987643444677888888899
Q ss_pred HcCCceEEecCcCCCC-CcHHHHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecCCCccC
Q 014320 135 LAGGTTMHIDFVIPIN-GSLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMI 212 (427)
Q Consensus 135 l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~ 212 (427)
+++||||++|+....+ ....+.++...+.. .+..++++++.......++.+++++++. +.|+..+|+++++++...+
T Consensus 82 ~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~ 160 (458)
T 1gkp_A 82 LMGGTTTYIEMCCPSRNDDALEGYQLWKSKAEGNSYCDYTFHMAVSKFDEKTEGQLREIV-ADGISSFKIFLSYKNFFGV 160 (458)
T ss_dssp HHTTEEEEEEEECCCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECCCCCTTHHHHHHHHH-HTTCCEEEEEECSTTTTBC
T ss_pred HhCCccEEEeCCCCCCCCCHHHHHHHHHHHhccCceeeEEEEEeecCCchhhHHHHHHHH-HhCCCEEEEEeccCCCcCC
Confidence 9999999999864322 24556666555443 3456677666544444555677888887 6799999999998877788
Q ss_pred CHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 213 NDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 213 ~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
++++++++++.|+++++++++|+|+...+....+.+.+.|...+.+|...+|...+..++.+.+.+++..+.+++++|++
T Consensus 161 ~~~~l~~~~~~a~~~~~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~H~~ 240 (458)
T 1gkp_A 161 DDGEMYQTLRLAKELGVIVTAHCENAELVGRLQQKLLSEGKTGPEWHEPSRPEAVEAEGTARFATFLETTGATGYVVHLS 240 (458)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHTTCCSGGGTTTTSCHHHHHHHHHHHHHHHHHHTCEEEECSCC
T ss_pred CHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHhcCCCChhhccCcCCHHHHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 99999999999999999999999988887777777888999999999989999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCC
Q 014320 293 SMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFN 372 (427)
Q Consensus 293 ~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~ 372 (427)
+.+.++.++.+++.|+.|++++||+|++++.+.+...+| .+..++++||+|.+.+++++|+++++|+++++||||.|++
T Consensus 241 ~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~-~g~~~~~~~p~r~~~~~~~l~~~~~~G~~~~~gtD~~~~~ 319 (458)
T 1gkp_A 241 CKPALDAAMAAKARGVPIYIESVIPHFLLDKTYAERGGV-EAMKYIMSPPLRDKRNQKVLWDALAQGFIDTVGTDHCPFD 319 (458)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEEEHHHHHCCGGGGGSCHH-HHHTTCCSSCCCCTHHHHHHHHHHHTTSSCEEECCBCCCC
T ss_pred CHHHHHHHHHHHHcCCeEEEEecccceeeCHHHhccccc-CCcceEEeCCCCCHHHHHHHHHHHhcCCeeEEECCCCCCC
Confidence 988889999999999999999999999988765532111 1234567899999999999999999999999999999998
Q ss_pred hhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 373 STQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 373 ~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
...|..+.++|+..+.|++|++++++.++..+++.+.+|++++++++|.||||+
T Consensus 320 ~~~k~~~~~~~~~~~~g~~g~~~~l~~~~~~~~~~~~ls~~~al~~~T~~pA~~ 373 (458)
T 1gkp_A 320 TEQKLLGKEAFTAIPNGIPAIEDRVNLLYTYGVSRGRLDIHRFVDAASTKAAKL 373 (458)
T ss_dssp HHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTTSSSCCHHHHHHHHTHHHHHH
T ss_pred HHHhhcccCChhhCCCCcccHHHHHHHHHHHHHHcCCCCHHHHHHHHhhCHHHH
Confidence 876654446889999999999999999987777777799999999999999984
No 9
>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.1e-49 Score=394.88 Aligned_cols=355 Identities=25% Similarity=0.353 Sum_probs=287.0
Q ss_pred EEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHHHHH
Q 014320 55 ILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAA 134 (427)
Q Consensus 55 ~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~~ 134 (427)
++|+|++|++.....+++|+|+||||++|++..+.+.+.++||++|++|+|||||+|+|+..+ +..+.+++...++.+
T Consensus 2 ~~i~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~~~~~~~id~~g~~v~PG~iD~H~H~~~~--g~~~~~~~~~~~~~~ 79 (424)
T 3gri_A 2 KLIKNGKVLQNGELQQADILIDGKVIKQIAPAIEPSNGVDIIDAKGHFVSPGFVDVHVHLREP--GGEYKETIETGTKAA 79 (424)
T ss_dssp EEEESCEEEETTEEEECEEEEETTEEEEEESCCCCCSSCEEEECTTCEEEECEEEEEECCCTT--TCTTTCCHHHHHHHH
T ss_pred EEEEeeEEEcCCCceeeeEEEECCEEEEecCCCCCCCCCeEEECCCCEEEeCeEEeeecCCCC--CCCCHHHHHHHHHHH
Confidence 689999999944456899999999999999875544567899999999999999999999877 777888899999999
Q ss_pred HcCCceEEecCcCCCCC-cHHHHHHHHHHHhcc-ccceeceeccccC-CChhhHHHHHHHHHHcCCCeEEEEEecCCCcc
Q 014320 135 LAGGTTMHIDFVIPING-SLTAGFEAYEKKAKN-SCMDYGFHMAITK-WDEVVSDEMEVMVKEKGINSFKFFMAYKGSFM 211 (427)
Q Consensus 135 l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~ 211 (427)
+++|||+++++....+. ...+.++...+.... ...++..++.... ...+.+.++.++. +.|+..+ .+++.+.
T Consensus 80 ~~~G~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~-~~G~~~~----~~~~~~~ 154 (424)
T 3gri_A 80 ARGGFTTVCPMPNTRPVPDSVEHFEALQKLIDDNAQVRVLPYASITTRQLGKELVDFPALV-KEGAFAF----TDDGVGV 154 (424)
T ss_dssp HHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEECCCEESBGGGCSSSBCCHHHHH-TTTCCCE----EECSSCC
T ss_pred HhCCEEEEeECcCCCCCCChHHHHHHHHHHhccCCCceEEEEEEEecCCCcchHHHHHHHH-hcCcEEE----ecCCcCc
Confidence 99999999998754332 334444444443322 3344444433221 1222344566666 5676665 3456677
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcC
Q 014320 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (427)
Q Consensus 212 ~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~ 291 (427)
.+++.++++++.|+++|+++++|+++...+... ....|....+.+...+|...|..++.+.+.+++..|++++++|+
T Consensus 155 ~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~---~~~~g~~~~~~~~~~~p~~~E~~~v~r~~~la~~~g~~~~i~H~ 231 (424)
T 3gri_A 155 QTASMMYEGMIEAAKVNKAIVAHCEDNSLIYGG---AMHEGKRSKELGIPGIPNICESVQIARDVLLAEAAGCHYHVCHV 231 (424)
T ss_dssp CSHHHHHHHHHHHHHHTCCEEECCCCGGGCTTC---CEESSHHHHHHTCCEECTHHHHHHHHHHHHHHHHHTCCEEECSC
T ss_pred CCHHHHHHHHHHHHhcCCEEEEeCCCHHHHhhh---hhhcCccchhhCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeC
Confidence 899999999999999999999999987643210 00011112234555699999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCC
Q 014320 292 MSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF 371 (427)
Q Consensus 292 ~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~ 371 (427)
++.+.++.++++|+.|++|++++||||++++++.+.. .+..++++||+|++.++++||+++++|++++++|||+|+
T Consensus 232 s~~~~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~----~~~~~~~~Pplr~~~~~~~L~~~l~~G~i~~igtDhap~ 307 (424)
T 3gri_A 232 STKESVRVIRDAKRAGIHVTAEVTPHHLLLTEDDIPG----NNAIYKMNPPLRSTEDREALLEGLLDGTIDCIATDHAPH 307 (424)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEECHHHHHCCGGGCCS----SCGGGCCSSCCCCHHHHHHHHHHHHTTSSCEECCCBCCC
T ss_pred CCHHHHHHHHHHHHcCCCEEEEecHHHHhcCHHHHhC----cCceEEEeCCCCCHHHHHHHHHHHhcCCceEEEcCCCCC
Confidence 9999999999999999999999999999999888753 236888999999999999999999999999999999999
Q ss_pred ChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 372 NSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 372 ~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+...|. .+|+.++.|++|+++++|.+++.++.+++++++++++++|.|||++
T Consensus 308 ~~~~k~---~~~~~~~~G~~g~e~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~ 359 (424)
T 3gri_A 308 ARDEKA---QPMEKAPFGIVGSETAFPLLYTHFVKNGDWTLQQLVDYLTIKPCET 359 (424)
T ss_dssp CHHHHT---SCTTTSCCCCCCTTTHHHHHHHHHTTTSSCCHHHHHHHHTHHHHHH
T ss_pred CHHHcc---CCHhHCCCCCccccccHHHHHHHHHHcCCCCHHHHHHHHhHHHHHH
Confidence 998885 4899999999999999999998888889999999999999999985
No 10
>2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A
Probab=100.00 E-value=1e-46 Score=381.62 Aligned_cols=375 Identities=45% Similarity=0.779 Sum_probs=306.9
Q ss_pred CccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHH
Q 014320 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQ 131 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~ 131 (427)
+.+++|+|++|++++...+++|+|+||||++||+..+.+.+.++||++|++|+|||||+|+|+..+..+..++++++..+
T Consensus 25 ~~~~li~n~~v~~~~~~~~~~V~I~~grI~~Ig~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~e~~~~~~ 104 (501)
T 2vm8_A 25 SDRLLIKGGKIVNDDQSFYADIYMEDGLIKQIGENLIVPGGVKTIEAHSRMVIPGGIDVHTRFQMPDQGMTSADDFFQGT 104 (501)
T ss_dssp CCCEEEEEEEEECSSCEEEEEEEEETTEEEEEESSCCCCSSSCEEECTTCEEEECEEEEEECTTCEETTEECSSCHHHHH
T ss_pred cCCEEEEeeEEECCCCceEeeEEEECCEEEEeccCCCCCCCCeEEECCCCEEeeCEEEeeecccccccCCCcHHHHHHHH
Confidence 35789999999998776679999999999999986443345689999999999999999999987643334577888889
Q ss_pred HHHHcCCceEEecCcCCCC-CcHHHHHHHHHHHhcc-ccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecCCC
Q 014320 132 AAALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAKN-SCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGS 209 (427)
Q Consensus 132 ~~~l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~ 209 (427)
+.++++||||++|+..+.+ ....+.++...+.+.+ ...+++++........+..++++++.++.|+..+|+++.+...
T Consensus 105 ~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~l~~~~G~~~i~~~~~~~~~ 184 (501)
T 2vm8_A 105 KAALAGGTTMIIDHVVPEPGTSLLAAFDQWREWADSKSCCDYSLHVDISEWHKGIQEEMEALVKDHGVNSFLVYMAFKDR 184 (501)
T ss_dssp HHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHHHHCSSEEEEEEECCSCSHHHHHHHHHHHHHSCCCEEEEESSSTTT
T ss_pred HHHHhCCcEEEEeCCCCCCCCChHHHHHHHHHHHhcCCeeEEEEEEEecCCCcccHHHHHHHHHhCCceEEEEeeccCCC
Confidence 9999999999999864432 2445556655554433 4556666544333344456677777755799999999887665
Q ss_pred ccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEE
Q 014320 210 FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV 289 (427)
Q Consensus 210 ~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~ 289 (427)
...+.++++++++.|+++|+++.+|+++...+....+.+.+.|+....+|...+|...+..++.+.+.++...++++|++
T Consensus 185 ~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~g~~~hi~ 264 (501)
T 2vm8_A 185 FQLTDCQIYEVLSVIRDIGAIAQVHAENGDIIAEEQQRILDLGITGPEGHVLSRPEEVEAEAVNRAITIANQTNCPLYIT 264 (501)
T ss_dssp TBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHTTTCCSTHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCCHHHHHHHHHHHHHhCCEEEEEccChHHHHHHHHHHHhcCCCChhhccccCCHHHHHHHHHHHHHHHHHhCCcEEEE
Confidence 67899999999999999999999999987766667777889999988899889999999899999999999999999999
Q ss_pred cCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCc-ccHHHHHHHHhcCCceEEecCC
Q 014320 290 HVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRAS-GHNKALQAALATGILQLVGTDH 368 (427)
Q Consensus 290 H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~-~~~~~l~~~l~~G~~~~lgSD~ 368 (427)
|++....++.++.+++.|+.++++++|++++++...+....+..+..++++||+|.. .+++.+|+++++|+++++||||
T Consensus 265 h~~~~~~~~~i~~~~~~G~~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~pp~r~~~~~~~~l~~~l~~G~~~~~gtD~ 344 (501)
T 2vm8_A 265 KVMSKSSAEVIAQARKKGTVVYGEPITASLGTDGSHYWSKNWAKAAAFVTSPPLSPDPTTPDFLNSLLSCGDLQVTGSAH 344 (501)
T ss_dssp EECCHHHHHHHHHHHHTTCCEEEEEBHHHHHCCGGGGGCSSHHHHHHTCCSSCCCSCTTHHHHHHHHHHHTSSCCCBCCB
T ss_pred eCCcHHHHHHHHHHHhCCCcEEEEEChhHhhcChhhhcccccccCceEEECCCCCCCcchHHHHHHHHhcCceEEEEecC
Confidence 999998889999999999999999999999988766532222112346678999986 5789999999999999999999
Q ss_pred CCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 369 CAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 369 ~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
.|++...+..+.++|...+.|++|.+++++.++..++..++++++++++++|.|||++
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~G~~g~e~~l~~~~~~~~~~~~l~~~~~l~~~T~~~A~~ 402 (501)
T 2vm8_A 345 CTFNTAQKAVGKDNFTLIPEGTNGTEERMSVIWDKAVVTGKMDENQFVAVTSTNAAKV 402 (501)
T ss_dssp CCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHTTTTSSCHHHHHHHHTHHHHHH
T ss_pred CCCChhhhhcccCChhhCCCCCccHHHHHHHHHHHHHHcCCCCHHHHHHHHhHhHHHH
Confidence 9998877765556788889999999999999886666677899999999999999984
No 11
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=100.00 E-value=6.5e-48 Score=382.77 Aligned_cols=355 Identities=25% Similarity=0.366 Sum_probs=283.2
Q ss_pred cEEEECcEEEcCCC-ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHHH
Q 014320 54 KILIKGGTVVNAHH-QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQA 132 (427)
Q Consensus 54 ~~~i~~~~i~~~~~-~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~ 132 (427)
+++|+|++|++..+ ..+++|+|+||||++|++..+ +++.++||++|++|+|||||+|+|+..+ +..+.+++...++
T Consensus 2 ~~~i~~~~v~~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~~id~~g~~v~PG~iD~H~H~~~~--~~~~~~~~~~~~~ 78 (428)
T 3mpg_A 2 NYLFKNGRYMNEEGKIVATDLLVQDGKIAKVAENIT-ADNAEVIDVNGKLIAPGLVDVHVHLREP--GGEHKETIETGTL 78 (428)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEEESSBEEECCSSCC-CTTSEEEECTTCEEEECEEEEEECCCTT--TCTTTCCHHHHHH
T ss_pred cEEEEeeEEEeCCCCeeeeeEEEECCEEEEecCCCC-CCCCeEEECCCCEEeeCEEEEeeccCCC--CCCchhHHHHHHH
Confidence 57999999997544 568899999999999998654 3467899999999999999999999877 6677888989999
Q ss_pred HHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhc-cccceeceeccccC-CChhhHHHHHHHHHHcCCCeEEEEEecCCC
Q 014320 133 AALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFHMAITK-WDEVVSDEMEVMVKEKGINSFKFFMAYKGS 209 (427)
Q Consensus 133 ~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~ 209 (427)
.++++|||+++++....+. ...+.++...+... ....++..++.... ...+.+.++.++. ..|+..+ .+++.
T Consensus 79 ~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~-~~G~~~~----~~~~~ 153 (428)
T 3mpg_A 79 AAAKGGFTTICAMPNTRPVPDCREHMEDLQNRIKEKAHVNVLPYGAITVRQAGSEMTDFETLK-ELGAFAF----TDDGV 153 (428)
T ss_dssp HHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEECEESBGGGCSSSBCCHHHHH-HTTCCCE----ECTTS
T ss_pred HHHhCCeEEEEeCCCCCCCCCcHHHHHHHHHHhcccCCcEEEEEeeEecCCCcchHHHHHHHH-HhCCEEE----ECCCc
Confidence 9999999999998654332 33344444333332 23334433322221 1122334466666 5677665 45566
Q ss_pred ccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEE
Q 014320 210 FMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV 289 (427)
Q Consensus 210 ~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~ 289 (427)
+..+++.++++++.|+++|+++.+|+++...+... ....|....+.+...+|...|..++.+.+.+++..+++++++
T Consensus 154 ~~~~~~~l~~~~~~a~~~g~~v~vH~~~~~~~~~~---~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~g~~~~i~ 230 (428)
T 3mpg_A 154 GVQDASMMLAAMKRAAKLNMAVVAHCEENTLINKG---CVHEGKFSEKHGLNGIPSVCESVHIARDILLAEAADCHYHVC 230 (428)
T ss_dssp CCCCHHHHHHHHHHHHHTTCCEEECCCCGGGCTTC---SEETTHHHHHTTCCEECTHHHHHHHHHHHHHHHHHTCCEEEC
T ss_pred CCCCHHHHHHHHHHHHhcCCeEEEECCChhHhhhH---HhhcCccchhhCcCCCCHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 67899999999999999999999999886543210 001111122344566999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCC
Q 014320 290 HVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHC 369 (427)
Q Consensus 290 H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~ 369 (427)
|+++.++++.+++++++|+++++++||||++++++.+.. .+..++++||+|.+.++++||+++++|.+++++|||+
T Consensus 231 H~s~~~~~~~i~~a~~~G~~v~~e~~p~~l~l~~~~~~~----~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~~i~tDh~ 306 (428)
T 3mpg_A 231 HVSTKGSVRVIRDAKRAGIKVTAEVTPHHLVLCEDDIPS----ADPNFKMNPPLRGKEDHEALIEGLLDGTIDMIATDHA 306 (428)
T ss_dssp SCCCHHHHHHHHHHHHTTCCEEECBCHHHHHCCGGGCCS----SCGGGCCSSCCCCHHHHHHHHHHHHHTSSCCBCCCBC
T ss_pred eCCCHHHHHHHHHHHhcCCCEEEEEchHHhEECHHHHhC----CCCeEEEeCCCCCHHHHHHHHHHHhCCCCcEEEcCCC
Confidence 999999999999999999999999999999999888752 2368899999999999999999999999999999999
Q ss_pred CCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 370 AFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 370 p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
|++...|.. +|+.++.|++|+++++|.++..++..++++++++++++|.|||++
T Consensus 307 p~~~~~k~~---~~~~~p~g~~g~e~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~ 360 (428)
T 3mpg_A 307 PHTAEEKAQ---GIERAPFGITGFETAFPLLYTNLVKKGIITLEQLIQFLTEKPADT 360 (428)
T ss_dssp CCCTTGGGS---CTTTSCSCCCCTTTHHHHHHHHTTTTTSSCHHHHHHTTTHHHHHH
T ss_pred CCCHHHccc---CHhhCCCCceehhhHHHHHHHHHHHcCCCCHHHHHHHHhHHHHHH
Confidence 999888854 799999999999999999998778888999999999999999984
No 12
>1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=5.6e-45 Score=364.67 Aligned_cols=368 Identities=39% Similarity=0.654 Sum_probs=299.3
Q ss_pred cEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHHHH
Q 014320 54 KILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAA 133 (427)
Q Consensus 54 ~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~ 133 (427)
+++|+|++|++++...+++|+|+||||++|++..+ ++.++||++|++|+|||||+|+|+.+......++++++..++.
T Consensus 2 ~~li~n~~v~~~~~~~~~~v~I~~g~I~~ig~~~~--~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~e~~~~~~~~ 79 (457)
T 1nfg_A 2 DIIIKNGTIVTADGISRADLGIKDGKITQIGGALG--PAERTIDAAGRYVFPGGIDVHTHVETVSFNTQSADTFATATVA 79 (457)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEETTEEEEESSCCC--CCSEEEECTTCEEEECEEEEEECCSCEETTEECSCCHHHHHHH
T ss_pred cEEEEeeEEEeCCCceeeeEEEECCEEEEecCCCC--CCCeEEeCCCCEEccceEeeccccccCcCCCCChhhHHHHHHH
Confidence 57999999999877678899999999999987532 3468999999999999999999997432111256788888899
Q ss_pred HHcCCceEEecCcCCCC-CcHHHHHHHHHHHhc-cccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecCCCcc
Q 014320 134 ALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFM 211 (427)
Q Consensus 134 ~l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~ 211 (427)
++++||||++|+....+ ....+.++...+... +..++++++......+.+..++++++. +.|+..+|+++++.....
T Consensus 80 ~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~G~~~~k~~~~~~~~~~ 158 (457)
T 1nfg_A 80 AACGGTTTIVDFCQQDRGHSLAEAVAKWDGMAGGKSAIDYGYHIIVLDPTDSVIEELEVLP-DLGITSFKVFMAYRGMNM 158 (457)
T ss_dssp HHHTTEEEEEEEEECCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECSSCCHHHHHHTTTGG-GGTCCEEEEESSSTTTTB
T ss_pred HHhCCcEEEEeCCCCCCCCChHHHHHHHHHHhcccCccCEEEEEeecCCchhHHHHHHHHH-HcCCCEEEEeeccCCCCC
Confidence 99999999999864322 245666666555543 355667776655444554455566655 689999999988654345
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcC
Q 014320 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (427)
Q Consensus 212 ~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~ 291 (427)
.+.+++.++++.+++.++++.+|+++...+....+.+.+.|......|...+|...+.+.+.+.++++++.|++++++|+
T Consensus 159 ~~~~~~~~~~~~a~~~~~~v~~H~e~~~~~~~~~~~~~~~g~~~~~~h~~~~~~~~~~~~~~~~~~~a~~~g~~~~~~H~ 238 (457)
T 1nfg_A 159 IDDVTLLKTLDKAVKTGSLVMVHAENGDAADYLRDKFVAEGKTAPIYHALSRPPRVEAEATARALALAEIVNAPIYIVHV 238 (457)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEECCC
T ss_pred CCHHHHHHHHHHHHhcCCEEEEeCCCHHHHHHHHHHHHhcCCcchhhccccCCHHHHHHHHHHHHHHHHHHCCCEEEEeC
Confidence 67889999999999999999999999887777777778889877777888899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCC
Q 014320 292 MSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF 371 (427)
Q Consensus 292 ~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~ 371 (427)
++...++.++.+++.|++++++++||+++++++.+....+ .+..++++||+|...++..+|+++++|+++++||||.|+
T Consensus 239 ~~~~~~~~~~~~~~~G~~v~~~~~~h~~~~~~~~~~~~~~-~~~~~~~~p~~r~~~~~~~~~~~~~~G~~~~~gtD~~~~ 317 (457)
T 1nfg_A 239 TCEESLEEVMRAKSRGVRALAETCTHYLYLTKEDLERPDF-EGAKYVFTPPARAKKDHDVLWNALRNGVFETVSSDHCSW 317 (457)
T ss_dssp CSHHHHHHHHHHHHHTCCEEECEEGGGGTCCGGGGGCTTT-GGGGGCCSSCCCCHHHHHHHHHHHHTTCCSCEECCBCCC
T ss_pred CcHHHHHHHHHHHHcCCeEEEEEchHHhEeCHHHhccccc-cCceeEEcCCCCCHHHHHHHHHHHhCCCeEEEecCCCCC
Confidence 9888788999988999999999999999998877643221 235677899999988999999999999999999999998
Q ss_pred Chh-hhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 372 NST-QKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 372 ~~~-~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+.. .|..+.++|+.++.|++|.+++++.++ .++..+++|++++++++|.||||+
T Consensus 318 ~~~~~k~~~~~~~~~~~~g~~g~e~~~~~~~-~~~~~~~l~~~~~l~~~T~~~A~~ 372 (457)
T 1nfg_A 318 LFKGHKDRGRNDFRAIPNGAPGVEERLMMVY-QGVNEGRISLTQFVELVATRPAKV 372 (457)
T ss_dssp CTTTTTTTTTTCGGGSCCCBCCTTTHHHHHH-HHHHTTSSCHHHHHHHHTHHHHHH
T ss_pred ChHHhhhcccCCHhHCCCCcccHHHHHHHHH-HHHHcCCCCHHHHHHHHhhhHHHH
Confidence 765 443333588999999999999999888 677777899999999999999984
No 13
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6
Probab=100.00 E-value=4.7e-45 Score=365.22 Aligned_cols=363 Identities=26% Similarity=0.326 Sum_probs=293.7
Q ss_pred ccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCC-CCChhhHHHHH
Q 014320 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG-SETIDDFFSGQ 131 (427)
Q Consensus 53 ~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g-~~~~e~~~~~~ 131 (427)
.+++|+|++|++++...+++|+|+||||++|++....+.+.++||++|++|+|||||+|+|+..+ + ..+++++...+
T Consensus 2 ~~~li~~~~v~~~~~~~~~~v~I~~g~I~~ig~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~--~~~~~~~~~~~~~ 79 (458)
T 1gkr_A 2 FDVIVKNCRLVSSDGITEADILVKDGKVAAISADTSDVEASRTIDAGGKFVMPGVVDEHVHIIDM--DLKNRYGRFELDS 79 (458)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEETTEEEEEESCCTTCCEEEEEECTTCEEEECEEEEEEECCCG--GGTTTSCCHHHHH
T ss_pred ceEEEECcEEECCCCceeeeEEEECCEEEEecCCCCCCCCCeEEeCCCCEEecCEEEeeecccCC--CCCCchhHHHHHH
Confidence 46899999999987667889999999999999764323346799999999999999999999875 3 34567777888
Q ss_pred HHHHcCCceEEecCc-CCCC-CcHHHHHHHHHHHhc-cccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecCC
Q 014320 132 AAALAGGTTMHIDFV-IPIN-GSLTAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKG 208 (427)
Q Consensus 132 ~~~l~~GvTtv~d~~-~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~ 208 (427)
+.++++||||++|+. ...+ ....+.++...+... .. ++++++.+... +..++++++. +.|+..+|++++++.
T Consensus 80 ~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~-~~g~~~i~~~~~~~~ 154 (458)
T 1gkr_A 80 ESAAVGGITTIIEMPITFPPTTTLDAFLEKKKQAGQRLK-VDFALYGGGVP---GNLPEIRKMH-DAGAVGFKSMMAASV 154 (458)
T ss_dssp HHHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCS-SEEEEEEECCT---TCHHHHHHHH-HTTCCEEEEESSCSB
T ss_pred HHHHcCCEEEEEeCCCCCCCCCCcHHHHHHHHHHhhhCc-eeEEEEeccCC---CCHHHHHHHH-HcCCcEEEEeecccC
Confidence 899999999999986 3322 233444544433332 23 55555443221 2355677777 579999999988763
Q ss_pred ---CccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCC
Q 014320 209 ---SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTP 285 (427)
Q Consensus 209 ---~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~ 285 (427)
.+..+.+.++++++.|+++|+++++|+++...+....+.+.+.|...+..|...+|...+..++.+.+.++.+.+++
T Consensus 155 ~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~G~~~~~~h~~~~~~~~~~~~~~~~~~la~~~g~~ 234 (458)
T 1gkr_A 155 PGMFDAVSDGELFEIFQEIAACGSVIVVHAENETIIQALQKQIKAAGGKDMAAYEASQPVFQENEAIQRALLLQKEAGCR 234 (458)
T ss_dssp TTTBCBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHHHCCE
T ss_pred CCCcccCCHHHHHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHhhcCccchhhccccCCHHHHHHHHHHHHHHHHHhCCC
Confidence 35679999999999999999999999998777766666777889877777887889888899999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEe
Q 014320 286 LYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVG 365 (427)
Q Consensus 286 ~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lg 365 (427)
+|++|+++...++.++.+++.|+++++++||++++++++.+.. .+..++++||+|...+++.+|+++++|+++++|
T Consensus 235 ~h~~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~----~~~~~~~~pp~r~~~~~~~l~~~~~~G~~~~lg 310 (458)
T 1gkr_A 235 LIVLHVSNPDGVELIHQAQSEGQDVHCESGPQYLNITTDDAER----IGPYMKVAPPVRSAEMNIRLWEQLENGLIDTLG 310 (458)
T ss_dssp EEECCCCSHHHHHHHHHHHHTTCCEEEEECHHHHSCCGGGHHH----HGGGGCCSSCCCCHHHHHHHHHHHHHTCCCEEC
T ss_pred EEEEeCCCHHHHHHHHHHHHCCCcEEEEEchHHheeCHHHhhc----cCceEEEcCCCCCHHHHHHHHHHHhCCCceEEE
Confidence 9999999877788898888899999999999999888766531 124667899999999999999999999999999
Q ss_pred cCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 366 TDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 366 SD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
|||.|++...|..+..+++..+.|++|.+++++.++..+++.+++|++++++++|.|||++
T Consensus 311 tD~~~~~~~~k~~g~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~l~~~~al~~~T~~~A~~ 371 (458)
T 1gkr_A 311 SDHGGHPVEDKEPGWKDVWKAGNGALGLETSLPMMLTNGVNKGRLSLERLVEVMCEKPAKL 371 (458)
T ss_dssp CCEECCCGGGTGGGGTCGGGSCCCBCCTTTHHHHHHHHTGGGTSSCHHHHHHHHTHHHHHH
T ss_pred eCCCCCChHHhccccCCHhHCCCCcccHHHHHHHHHHHHHHhCCCCHHHHHHHHhhhHHHH
Confidence 9999998776643334888899999999999999886677777899999999999999974
No 14
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=100.00 E-value=7e-42 Score=339.02 Aligned_cols=351 Identities=25% Similarity=0.347 Sum_probs=264.7
Q ss_pred EEEECcEEEcCCC-ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHHHH
Q 014320 55 ILIKGGTVVNAHH-QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAA 133 (427)
Q Consensus 55 ~~i~~~~i~~~~~-~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~ 133 (427)
++|+|++|+++.+ ..+++|+|+||||++|++. ++.++||++|++|+|||||+|+|+..+ +..+.+++...++.
T Consensus 2 ~~i~~~~v~~~~~~~~~~~v~i~~g~I~~i~~~----~~~~~id~~g~~v~PG~iD~H~H~~~~--~~~~~~~~~~~~~~ 75 (426)
T 2z00_A 2 ILIRNVRLVDARGERGPADVLIGEGRILSLEGG----EAKQVVDGTGCFLAPGFLDLHAHLREP--GEEVKEDLFSGLLA 75 (426)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEETTEEEESBCC----CCSEEEECTTCEEEECEEEEEECCCTT--TCTTTCCHHHHHHH
T ss_pred EEEEeeEEECCCCceecceEEEECCEEEEEecC----CCceEEeCCCCEEecCEEEeccccCCC--CCCchHHHHHHHHH
Confidence 6899999999775 4678999999999999874 245799999999999999999999876 54456778888899
Q ss_pred HHcCCceEEecCcCCCCC-cHHHHHHHHHHHhcc-ccceeceecccc-CCChhhHHHHHHHHHHcCCCeEEEEEecCCCc
Q 014320 134 ALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKN-SCMDYGFHMAIT-KWDEVVSDEMEVMVKEKGINSFKFFMAYKGSF 210 (427)
Q Consensus 134 ~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~ 210 (427)
++++||||++|+...... ...+.++...+.... ..+++...+... ...++.+++++++. +.|+..++ .++.+
T Consensus 76 ~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~g~~~i~----~~~~~ 150 (426)
T 2z00_A 76 AVRGGYTDLVSMPNTKPPVDTPEAVRALKEKAKALGLARLHPAAALTEKQEGKTLTPAGLLR-EAGAVLLT----DDGRT 150 (426)
T ss_dssp HHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHTSSEECCEECSBGGGCSSSBCCHHHHH-HHTCCEEE----CTTSC
T ss_pred HHhCCccEEEecCCCCCCcChHHHHHHHHHHhcccCcccEEEEEEeecCCChhhHHHHHHHH-HcCCEEEE----CCCcC
Confidence 999999999998643221 222333333333222 113332222111 11112234556666 45776664 34456
Q ss_pred cCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHh------cCC
Q 014320 211 MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEF------VNT 284 (427)
Q Consensus 211 ~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~------~g~ 284 (427)
..+++.++++++.|+++|+++.+|+++........ .+.|......+...+|...|..++.+.+++++. .+.
T Consensus 151 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~---~~~g~~~~~~g~~~~~~~~e~~~~~~~~~~a~~~~~~~~~g~ 227 (426)
T 2z00_A 151 NEDAGVLAAGLLMAAPLGLPVAVHAEDAGLRRNGV---MNDGPLADLLGLPGNPPEAEAARIARDLEVLRYALRRSPATP 227 (426)
T ss_dssp CCCHHHHHHHHHHHGGGTCCEEECCCCHHHHTTCS---EECSHHHHHHTCCEECHHHHHHHHHHHHHHHHHHHHHCSSCC
T ss_pred CCCHHHHHHHHHHHHhhCCEEEEeCCCHHHHhhhh---hccCccchhcccccCChHHHHHHHHHHHHHHhhccccccCCC
Confidence 67999999999999999999999998765432100 000100111223347888888888888888888 899
Q ss_pred CEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEE
Q 014320 285 PLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLV 364 (427)
Q Consensus 285 ~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~l 364 (427)
+++++|+++.+.++.++++++.|+.|++++||++++++.+.+.. .+..++++||+|++.+++.||+++++|+++++
T Consensus 228 ~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~----~~~~~~~~~plr~~~~~~~l~~~l~~G~~~~l 303 (426)
T 2z00_A 228 RLHVQHLSTKRGLELVREAKRAGLPVTAEATPHHLTLTEEALRT----FDPLFKVAPPLRGEEDREALLEGLLDGTLDAI 303 (426)
T ss_dssp CEEETTCCCHHHHHHHHHHHHTTCCEEEEECHHHHHCCGGGGGG----CCGGGCCSSCCCCHHHHHHHHHHHHHTSSCEE
T ss_pred cEEEEeCCCHHHHHHHHHHHHcCCCEEEEEchHHhEeCHhHhhc----cCceEEEeCCCCCHHHHHHHHHHHhCCCcEEE
Confidence 99999999988889999999999999999999999888765531 13466789999999999999999999999999
Q ss_pred ecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 365 GTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 365 gSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
||||+|++...|. ++|+.++.|+++.+++++.++..++..+++|++++++++|.|||++
T Consensus 304 gsD~~p~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ls~~~~l~~~T~n~A~~ 362 (426)
T 2z00_A 304 ATDHAPHTLAEKE---KDLLRAPFGIPSLEVAFPLLYTELHLKRGFPLQRLVELFTDGPRRV 362 (426)
T ss_dssp CCCBCCCCTTGGG---SCTTTSCCCBCCTTTHHHHHHHHTHHHHCCCHHHHHHHHTHHHHHH
T ss_pred ecCCCCCCHHHcc---CChhhCCCCcccHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhHHHH
Confidence 9999999877664 4889999999999999999886667777899999999999999974
No 15
>2gwn_A Dihydroorotase; zinc-binding prote structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; HET: KCX GOL; 1.85A {Porphyromonas gingivalis}
Probab=100.00 E-value=1.2e-41 Score=339.98 Aligned_cols=355 Identities=19% Similarity=0.271 Sum_probs=275.5
Q ss_pred ccEEEECcEEEcCCCceeeeEEEeCCeEEEeeC-CCCC---CCCceEEeCCCCEEeccccccccccccCcCCCCChhhHH
Q 014320 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQP-NINV---GDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFF 128 (427)
Q Consensus 53 ~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~-~~~~---~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~ 128 (427)
++++|+|++|++++...+++|+|+||||++|++ .... +.+.++||++|++|+|||||+|+|+..+ +..++++++
T Consensus 4 m~~li~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~--~~~~~e~~~ 81 (452)
T 2gwn_A 4 MKILLRNALITNEGKTFPGSVMIDGAFISRIIEGELPADDNLSADEVIECSGLRLFPGCIDDQVHFREP--GLTHKATIA 81 (452)
T ss_dssp SEEEEEEEEEEETTEEEEEEEEEETTEEEEEEESCCCTTCCTTCSEEEECTTCEEEECEEEEEECCCTT--TCTTTCCHH
T ss_pred ccEEEECeEEECCCceeeeeEEEECCEEEEEecCCCccccCCCCCeEEeCCCCEEecCEEeeccccCCC--CCCcHHHHH
Confidence 468999999999876678899999999999987 4332 2346899999999999999999999876 556778888
Q ss_pred HHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEec
Q 014320 129 SGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAY 206 (427)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~ 206 (427)
..++.++++||||++|+....+. ...+.++...+.. .+..++++++....... .+++.++. ..|..++|.++++
T Consensus 82 ~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~-~~g~~g~k~~~~~ 157 (452)
T 2gwn_A 82 SESRAAVAGGVTSFMDMPNTNPPTTMWERLLEKRQIGADTAWANYGFFFGGTNDN---IDEIKRVD-KHLVPGLKLFLGS 157 (452)
T ss_dssp HHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEECEECCSSC---HHHHHTCC-TTSCSCEEEESSS
T ss_pred HHHHHHHhCCeEEEEcCCCCCCCCChHHHHHHHHHHhhccCcccEEEEEeecCCC---HHHHHHHH-HcCCCEEEEEecc
Confidence 88999999999999998754322 3344444443333 33667777665544332 33455444 4578899999875
Q ss_pred CC--CccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHH-HHcCC-CCcccccccCCHHHHHHHHHHHHHHHHhc
Q 014320 207 KG--SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRM-IELGI-TGPEGHALSRPPLLEGEATTRAIRLAEFV 282 (427)
Q Consensus 207 ~~--~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l-~~~G~-~~~~~~~~~~p~~~e~~a~~~~~~~~~~~ 282 (427)
.. .+..+.+.+++.++. .+.++.+|+++...+......+ ...|. ..+..|...+|..++.+.+.+.++++++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~---~~~~~~~h~~~~~~~~~~~~~~~~~~G~~~~~~~h~~~~~~~~~~~~l~~~~~la~~~ 234 (452)
T 2gwn_A 158 STGNMLVDNKETLEKIFGE---CDLLIATHCEKEEIIRANKEHYKAKYGNDLDIHFHPLIRSEEACYRSSAEAVELAERM 234 (452)
T ss_dssp CCGGGBCCCHHHHHHHHHH---CCSCEEEECCCHHHHHHHHHHHHHHHCSCCCGGGHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHH---cCCEEEEcCCCHHHHHhHHhhhhhhcCcccchhhccccCChHHHHHHHHHHHHHHHHh
Confidence 32 122356777766554 4888999999876665544443 45564 56777878899999999999999999999
Q ss_pred CCCEEEEcCCCHHHHHHHHH---HhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcC
Q 014320 283 NTPLYVVHVMSMDAMEEIAK---ARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATG 359 (427)
Q Consensus 283 g~~~~i~H~~~~~~~~~i~~---~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G 359 (427)
|++++++|+++.+.++.+++ +++. +|+++++||+++++++++.. .+..++++||+|...++..+|+++++|
T Consensus 235 g~~v~i~H~~~~~~~~~~~~~~a~~~~--~v~~~~~~h~~~l~~~~~~~----~g~~~~~~P~lr~~~~~~~l~~~l~~G 308 (452)
T 2gwn_A 235 NARLHILHLSTEKELSLFRNDIPTAQK--RITSEVCVHHLWFSDTDYGR----LGNRIKWNPAIKKESDREALRAAVRNG 308 (452)
T ss_dssp TCCEEECCCCCTGGGGGSCCSSCGGGC--SEEEEEEHHHHHCCGGGHHH----HGGGGCCSSCCCCHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCHHHHHHHHHhhcccCC--CeEEEEchHHhhcCHHHHhc----cCceEEECCCCCCHHHHHHHHHHHHCC
Confidence 99999999997666666655 2433 68999999999999877632 235777899999998999999999999
Q ss_pred CceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 360 ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 360 ~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+++++||||.|++...|. .+|+.+++|+++++++++.++. .+..++++++++++++|.|||++
T Consensus 309 v~~~lgTD~~~~~~~~k~---~~~~~~~~g~~~~e~~~~~~~~-~~~~~~ls~~~~l~~~T~~~A~~ 371 (452)
T 2gwn_A 309 RIDIIATDHAPHLLREKE---GSCLQAASGGPLVQHSLLALLE-LCNQGIFSIEEIVSKTAHIPATL 371 (452)
T ss_dssp SSCEEECCBCCCCHHHHC---SCTTTSCCCCCCTTTHHHHHHH-HHHTTSSCHHHHHHHHTHHHHHH
T ss_pred CceEEEeCCCCCChHHhc---CChhhCCCCCccHHHHHHHHHH-HHHcCCCCHHHHHHHHhHhHHHH
Confidence 999999999999877663 3899999999999999998885 56677899999999999999984
No 16
>3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp}
Probab=100.00 E-value=2.9e-42 Score=330.01 Aligned_cols=279 Identities=14% Similarity=0.130 Sum_probs=218.6
Q ss_pred CCCEEeccccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhc-ccc-ceeceec
Q 014320 99 TGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSC-MDYGFHM 175 (427)
Q Consensus 99 ~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~~-~~~~~~~ 175 (427)
.|++|+||+||+|+|+.+ |. ..+...+++++|+|+++||.+..+. ...+.++.+++... ... +++.+++
T Consensus 22 ~~~~vlPG~ID~HvHlre---G~-----~~~e~~aA~aGG~Ttvi~mPnt~P~~~~~~~~~~~~~~a~~~~~~vd~~~~~ 93 (359)
T 3pnu_A 22 SNAMKLKNPLDMHLHLRD---NQ-----MLELIAPLSARDFCAAVIMPNLIPPLCNLEDLKAYKMRILKACKDENFTPLM 93 (359)
T ss_dssp SCCEEEESCEEEEECCCS---HH-----HHHHHHHHHHTTCSEEEECCCCSSCCCSHHHHHHHHHHHHHHHTTSCCEEEE
T ss_pred CCcEEccCcEEccccCCC---CC-----cchhHHHHHhCCCcEEEECCCCCCCCCcHHHHHHHHHHHhccCCCceEEEee
Confidence 579999999999999976 22 2334558899999999999865443 55666666665543 355 7888877
Q ss_pred c--ccCCChhhHHHHHHHHHHcCCCeEEEEEecC------CCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHH
Q 014320 176 A--ITKWDEVVSDEMEVMVKEKGINSFKFFMAYK------GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKR 247 (427)
Q Consensus 176 ~--~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~------~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~ 247 (427)
. .+.. ..+++.++. .. +.++|+|+.+. +....+.+.++++++.+++.|+++.+|+|+.+.+.
T Consensus 94 ~l~lt~~---~~~el~~l~-~~-v~~~Kl~~aga~~~s~~~~~~~~~~~l~~~l~~~~~~g~~v~vHaEd~~~i~----- 163 (359)
T 3pnu_A 94 TLFFKNY---DEKFLYSAK-DE-IFGIKLYPAGITTNSNGGVSSFDIEYLKPTLEAMSDLNIPLLVHGETNDFVM----- 163 (359)
T ss_dssp EEECSCC---CHHHHHHHT-TT-CSEEEECBTTSSSSCTTSBCCCCHHHHHHHHHHHHHTTCCEEECCCCSSCGG-----
T ss_pred eeEecCC---CHHHHHHHH-Hh-hhehhheeCCCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEecCCchHhH-----
Confidence 6 5532 245666665 45 77999998641 22234889999999999999999999999876431
Q ss_pred HHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhc-CCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccc
Q 014320 248 MIELGITGPEGHALSRPPLLEGEATTRAIRLAEFV-NTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWL 326 (427)
Q Consensus 248 l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~-g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~ 326 (427)
..|..++.+++.++++. |+|+|++|+++.++++.|+++ ++|++|+|||||+++++++
T Consensus 164 ------------------~~E~~ai~r~~~la~~~~g~~lhi~HvSt~~~v~~I~~A----~~VtaEv~phhL~lt~~~~ 221 (359)
T 3pnu_A 164 ------------------DRESNFAKIYEKLAKHFPRLKIVMEHITTKTLCELLKDY----ENLYATITLHHLIITLDDV 221 (359)
T ss_dssp ------------------GTTGGGHHHHHHHHHHCTTSCEEECSCCSHHHHHHHHHC----TTEEEEECSGGGTCCHHHH
T ss_pred ------------------HHHHHHHHHHHHHHHHcCCCcEEEEecCcHHHHHHHHhc----CCceEEEechhhEEcHHHh
Confidence 12456778888898864 999999999999999999887 7899999999999999887
Q ss_pred cCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCce-EEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHH
Q 014320 327 WHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQ-LVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV 405 (427)
Q Consensus 327 ~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~-~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~ 405 (427)
...++ +..++++||||++.||++||+++++|.++ +|+|||+||+.++|.. + ..++|+.++++.||++++ .+
T Consensus 222 ~~~~~--~~~~k~~PPLR~~~dr~aL~~al~dG~id~~iaTDHaPh~~~eK~~---~--~g~~Gi~~~~~~L~l~~~-~~ 293 (359)
T 3pnu_A 222 IGGKM--NPHLFCKPIAKRYEDKEALCELAFSGYEKVMFGSDSAPHPKDTKEC---C--GCAAGVFSAPVILPVLAE-LF 293 (359)
T ss_dssp HTSSC--CGGGCCSSCCCCHHHHHHHHHHHHTTCTTEEECCCBCCCBC-----------CCCSCBCCGGGHHHHHHH-HH
T ss_pred cCcCC--CCceEEcCCCCCHHHHHHHHHHHhcCCCCEEEecCCCCCCHHHhCC---C--CCCCChhhHHHHHHHHHH-HH
Confidence 53222 36899999999999999999999999999 7999999999988842 3 357899999999999985 55
Q ss_pred hcCCCCHHHHHHHHchhhhcC
Q 014320 406 ESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 406 ~~~~l~l~~~v~~~t~npA~~ 426 (427)
. ++++++++++++|.||||+
T Consensus 294 ~-~~~~l~~lv~~~s~nPAki 313 (359)
T 3pnu_A 294 K-QNSSEENLQKFLSDNTCKI 313 (359)
T ss_dssp H-HHSCHHHHHHHHTHHHHHH
T ss_pred h-hcCCHHHHHHHHHHhHHHH
Confidence 3 4579999999999999986
No 17
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A*
Probab=100.00 E-value=4.6e-41 Score=337.14 Aligned_cols=354 Identities=22% Similarity=0.276 Sum_probs=234.0
Q ss_pred CccEEEECcEEEcCCC--ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHH
Q 014320 52 SSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFS 129 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~--~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~ 129 (427)
|++++|+|++|++++. ..+++|+|+||||++|++... +.+.++||++|++|+|||||+|+|+..+ +..+.+++..
T Consensus 46 mm~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~~iD~~g~~v~PGlID~H~H~~~~--~~~~~~~~~~ 122 (467)
T 1xrt_A 46 MLKLIVKNGYVIDPSQNLEGEFDILVENGKIKKIDKNIL-VPEAEIIDAKGLIVCPGFIDIHVHLRDP--GQTYKEDIES 122 (467)
T ss_dssp CCEEEEESCEEEEGGGTEEEECEEEEETTEEEEEESSCC-CSSEEEEECTTSEEEECEEEEEECCCTT--TCTTTCCHHH
T ss_pred eeeEEEEeeEEECCCCCceecceEEEECCEEEEecCCCC-CCCCcEEeCCCCEEccCEEEEeecccCC--CCCchhhHHH
Confidence 3478999999998764 467899999999999997543 2346899999999999999999999875 4455677888
Q ss_pred HHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhcc-ccceeceeccccC-CChhhHHHHHHHHHHcCCCeEEEEEec
Q 014320 130 GQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKN-SCMDYGFHMAITK-WDEVVSDEMEVMVKEKGINSFKFFMAY 206 (427)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~g~~~ik~~~~~ 206 (427)
.++.++++||||++|+...... ...+.++...+.... ..+++...+.... ...+.+++++++. ..|+..+ ..
T Consensus 123 ~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~l~-~~g~~~i----~~ 197 (467)
T 1xrt_A 123 GSRCAVAGGFTTIVCMPNTNPPIDNTTVVNYILQKSKSVGLCRVLPTGTITKGRKGKEIADFYSLK-EAGCVAF----TD 197 (467)
T ss_dssp HHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEECBCSBGGGCSSSBCCHHHHH-HHTCCCB----CC
T ss_pred HHHHHHhCCeEEEEecCCCCCCCChHHHHHHHHHHhcccCcceEEEEeeecCCCCcccHHHHHHHH-HcCCEEE----Ec
Confidence 8899999999999998753221 223333333333222 2233322221111 1112233455555 3566554 23
Q ss_pred CCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCE
Q 014320 207 KGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPL 286 (427)
Q Consensus 207 ~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~ 286 (427)
++....+.+.++++++.|+++|+++.+|+++...+.... +.|....+.+...++...|..++.+.+.++...+.++
T Consensus 198 ~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~~~~~l----~~g~~~~~~g~~~~~~~~e~~~~~~~~~~~~~~g~~~ 273 (467)
T 1xrt_A 198 DGSPVMDSSVMRKALELASQLGVPIMDHCEDDKLAYGVI----NEGEVSALLGLSSRAPEAEEIQIARDGILAQRTGGHV 273 (467)
T ss_dssp TTSCCCCHHHHHHHHHHHHHHTCEEEECCCGGGGTC------------------------CHHHHHHHHHHHHHHHCCEE
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCEEEEECCCHHHHHHHH----hcCccchhcccccCChHHHHHHHHHHHHHHHHhCCCE
Confidence 445567899999999999999999999997655432111 1222222222334555667777778888888899999
Q ss_pred EEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEec
Q 014320 287 YVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGT 366 (427)
Q Consensus 287 ~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgS 366 (427)
|++|++..+.++.++++++.|+.+++++||++++++.+.+.. .+...++.||+|.+.++..+|+++++|+++++||
T Consensus 274 hi~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~----~~~~~~~~pplr~~~~~~~l~~~l~~Gv~~~lgT 349 (467)
T 1xrt_A 274 HIQHVSTKLSLEIIEFFKEKGVKITCEVNPNHLLFTEREVLN----SGANARVNPPLRKKEDRLALIEGVKRGIIDCFAT 349 (467)
T ss_dssp EESCCCSHHHHHHHHHHHHTTCCEEEEECGGGGC--------------------------CCHHHHHHHHHHTCSCEECC
T ss_pred EEEeCCCHHHHHHHHHHHhcCCcEEEeccHHHHhcCHhHhhc----cCceEEEcCCCCCHHHHHHHHHHHhCCceEEEee
Confidence 999999988889999999999999999999999887665421 1246678899999999999999999999999999
Q ss_pred CCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 367 DHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 367 D~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
||.|++...|. .|+..+.|++|.+++++.++. ++..+.++++++++++|.|||++
T Consensus 350 D~~~~~~~~~~----~~~~~~~g~~g~e~~l~~~l~-~~~~g~ls~~~al~~aT~n~A~~ 404 (467)
T 1xrt_A 350 DHAPHQTFEKE----LVEFAMPGIIGLQTALPSALE-LYRKGIISLKKLIEMFTINPARI 404 (467)
T ss_dssp CBCCCCC---------------CCCCGGGHHHHHHH-HHHTTSSCHHHHHHHHTHHHHHH
T ss_pred CCCCCChhHhc----ccccCCCCCccHHHHHHHHHH-HHHcCCCCHHHHHHHhccCHHHH
Confidence 99998876542 377789999999999998886 66666799999999999999984
No 18
>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A*
Probab=100.00 E-value=3.2e-39 Score=310.52 Aligned_cols=287 Identities=14% Similarity=0.125 Sum_probs=217.8
Q ss_pred CCCEEeccccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhc-cccceecee--
Q 014320 99 TGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAK-NSCMDYGFH-- 174 (427)
Q Consensus 99 ~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~-- 174 (427)
.+++|+||+||+|+|+.+. . ...+.++++++||||++||.+..+. ...+.++.+.+... ...+++.++
T Consensus 4 ~~~~v~PG~ID~HvH~~~g---~-----~~~e~~aa~~gGvTtvv~mpnt~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (347)
T 2z26_A 4 SQVLKIRRPDDWHLHLRDG---D-----MLKTVVPYTSEIYGRAIVMPNLAPPVTTVEAAVAYRQRILDAVPAGHDFTPL 75 (347)
T ss_dssp CCEEEEECCCEEEECCCSH---H-----HHHHHHHHHHTTCSEEEECCCCSSCCCSHHHHHHHHHHHHHTSCTTCCCEEE
T ss_pred CCeEECCCcceeeecCCCC---C-----chhhHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHhcccCCcccEEEE
Confidence 4579999999999999762 1 1234588999999999999754333 34455555544433 334333332
Q ss_pred ccccCCChhhHHHHHHHHHHcCC-CeEEEEEecC----CCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHH
Q 014320 175 MAITKWDEVVSDEMEVMVKEKGI-NSFKFFMAYK----GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMI 249 (427)
Q Consensus 175 ~~~~~~~~~~~~~~~~l~~~~g~-~~ik~~~~~~----~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~ 249 (427)
+......+...+++.++. +.|+ .++|+|+.+. +....+.+.++++++.+++.|+++.+|+|+....
T Consensus 76 ~~~~~~~~~~~~ei~~l~-~~G~~~g~K~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~vH~ed~~~~-------- 146 (347)
T 2z26_A 76 MTCYLTDSLDPNELERGF-NEGVFTAAKLYPANATANSSHGVTSVDAIMPVLERMEKIGMPLLVHGEVTHAD-------- 146 (347)
T ss_dssp EEEECCTTCCHHHHHHHH-HTTSEEEEEECCCCTTCCTTTCCSCGGGGHHHHHHHHHHTCCEEECCCCCCTT--------
T ss_pred EEEEeCCCCCHHHHHHHH-HCCCeEEEEEeecCCcCCCCCccCCHHHHHHHHHHHHHhCCEEEEEecCCccc--------
Confidence 332112222366788777 6897 7999999864 2334578899999999999999999999976411
Q ss_pred HcCCCCcccccccCCHHHHHHHHHHHH--HHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCccccc
Q 014320 250 ELGITGPEGHALSRPPLLEGEATTRAI--RLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLW 327 (427)
Q Consensus 250 ~~G~~~~~~~~~~~p~~~e~~a~~~~~--~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~ 327 (427)
. .+...|..++.+.+ .+++..++++|++|+++.++++.+++++ .+|++++||||++++++++.
T Consensus 147 ----~--------~~~~~E~~~~~~~i~~~la~~~~~~~hi~Hvst~~~~~~i~~ak---~~Vt~e~~ph~L~l~~~~~~ 211 (347)
T 2z26_A 147 ----I--------DIFDREARFIESVMEPLRQRLTALKVVFEHITTKDAADYVRDGN---ERLAATITPQHLMFNRNHML 211 (347)
T ss_dssp ----S--------CGGGHHHHHHHHTHHHHHHHSTTCCEEECSCCSHHHHHHHHTSC---TTEEEEECHHHHHCCHHHHH
T ss_pred ----c--------CHHHHHHHHHHHHHHHHHHhhcCCcEEEEECCcHHHHHHHHHhC---CCceEeecchHheecHHHhc
Confidence 0 11223566677777 5788899999999999999988888775 58999999999999988774
Q ss_pred CCCcccCceeEEcCCCCCcccHHHHHHHHhcCCce-EEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHh
Q 014320 328 HSDFVTAAKYVMSPPIRASGHNKALQAALATGILQ-LVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVE 406 (427)
Q Consensus 328 ~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~-~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~ 406 (427)
..+ .+..++++||||++.|+++||+++.+|.++ +|+|||+||..++|.. ++. .+|+.|+++.+|++++ .+
T Consensus 212 ~~~--~~~~~k~~PPLR~~~d~~aL~~~l~~G~id~~i~SDhaP~~~~~K~~---~~g--~~Gi~~~e~~l~l~~~-~~- 282 (347)
T 2z26_A 212 VGG--VRPHLYCLPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKES---SCG--CAGCFNAPTALGSYAT-VF- 282 (347)
T ss_dssp TTS--BCGGGCCSSCCCCHHHHHHHHHHHHTTCTTEEECCCBCCCCHHHHSS---SSB--CCCCCCTTTHHHHHHH-HH-
T ss_pred CcC--CCccEEEeCCCCCHHHHHHHHHHHhcCCCCeEEecCCCCCCHHHhcC---CCC--CCCcCcHHHHHHHHHH-Hh-
Confidence 222 246899999999999999999999999999 8999999999887742 332 5889999999999985 44
Q ss_pred cCCCCHHHHHHHHchhhhcC
Q 014320 407 SGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 407 ~~~l~l~~~v~~~t~npA~~ 426 (427)
+++++++++++++|.||||+
T Consensus 283 ~~~~sl~~~v~~~s~nPAki 302 (347)
T 2z26_A 283 EEMNALQHFEAFCSVNGPQF 302 (347)
T ss_dssp HHTTCGGGHHHHHHTHHHHH
T ss_pred hcCCCHHHHHHHHhHhHHHH
Confidence 46799999999999999985
No 19
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=100.00 E-value=3.8e-34 Score=287.48 Aligned_cols=324 Identities=18% Similarity=0.128 Sum_probs=236.2
Q ss_pred CCccEEEECcEEEcCCC--ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHH
Q 014320 51 SSSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFF 128 (427)
Q Consensus 51 ~~~~~~i~~~~i~~~~~--~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~ 128 (427)
|+.+++|+|++|+++++ ...++|+|+||||++|++... +.+.++||++|++|+|||||+|+|+...... .+
T Consensus 5 ~~~~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~~id~~g~~v~PG~iD~H~H~~~~~~~--~~---- 77 (480)
T 3gip_A 5 EKLDFKITGGWIIDGTGAPRRRADLGVRDGRIAAIGELGA-HPARHAWDASGKIVAPGFIDVHGHDDLMFVE--KP---- 77 (480)
T ss_dssp CCEEEEEESSEECCSSSCCCEECEEEEETTEEEEEECCTT-SCEEEEEECTTSEEEECEEESSCCCTTHHHH--ST----
T ss_pred ccCCEEEECcEEECCCCCeeeeeEEEEECCEEEEecCCCC-CCCCeEEECCCCEEccCEEeccccccccccC--Ch----
Confidence 46789999999999876 468999999999999998643 3457899999999999999999998654111 11
Q ss_pred HHHHHHHcCCceEEecC---------cCCCCC-cH---------HHHHHHHHHHh--ccccceeceecccc---------
Q 014320 129 SGQAAALAGGTTMHIDF---------VIPING-SL---------TAGFEAYEKKA--KNSCMDYGFHMAIT--------- 178 (427)
Q Consensus 129 ~~~~~~l~~GvTtv~d~---------~~~~~~-~~---------~~~~~~~~~~~--~~~~~~~~~~~~~~--------- 178 (427)
+...++.+||||+++. ...... .. ++.+..+.+.. ....++++++.+..
T Consensus 78 -~~~~~~~~G~Tt~~~g~cG~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~r~~~~g~ 156 (480)
T 3gip_A 78 -DLRWKTSQGITTVVVGNCGVSAAPAPLPGNTAAALALLGETPLFADVPAYFAALDAQRPMINVAALVGHANLRLAAMRD 156 (480)
T ss_dssp -TCHHHHTTTEEEEEECCTTCCSCSCCCTTCCCGGGGGTCSSCCCSSHHHHHHHHHHSCCSSEEEEEEEHHHHHHHHCSS
T ss_pred -hHHHHhcCCeeEEEecCCCcCCCCCCcccchhhhhhhhccCccccCHHHHHHHHHhCCCCceEEEccccHHHHHHhcCC
Confidence 1235699999999983 111100 00 11233333332 23566776654321
Q ss_pred ---CCChhhHHHHHHHHH---HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcC
Q 014320 179 ---KWDEVVSDEMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELG 252 (427)
Q Consensus 179 ---~~~~~~~~~~~~l~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G 252 (427)
..+.+.++++.++++ ..|+.+++.++.+......+.+++.++++.++++|.++.+|+++....
T Consensus 157 ~~~~~~~~~l~~m~~l~~~~~~~Ga~g~~~~~~y~p~~~~~~~el~~~~~~a~~~g~~v~~H~~~~~~~----------- 225 (480)
T 3gip_A 157 PQAAPTAAEQQAMQDMLQAALEAGAVGFSTGLAYQPGAVAQAAELEGLARVAAERRRLHTSHIRNEADG----------- 225 (480)
T ss_dssp TTSCCCHHHHHHHHHHHHHHHHHTCCEEEEETTSTTGGGCCHHHHHHHHHHHHHTTCEEEEECSCSSTT-----------
T ss_pred cCCCCCHHHHHHHHHHHHHHHHCCCcEEeecCccCCcccCCHHHHHHHHHHHHHcCCEEEEEecCcccc-----------
Confidence 124455667776664 579999999987765555688999999999999999999999765321
Q ss_pred CCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCC---------CHHHHHHHHHHhhcCCCEEEecCccceeeCc
Q 014320 253 ITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM---------SMDAMEEIAKARKAGQRVIGEPVVSGLVLDD 323 (427)
Q Consensus 253 ~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~---------~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~ 323 (427)
+..++.+.+.++++.|++++++|++ +.+.++.++.++++|++|++++|||++.++.
T Consensus 226 ---------------~~~a~~e~i~la~~~g~~v~i~H~s~~~~~~~~~~~~~l~~i~~a~~~G~~Vt~e~~p~~~~~t~ 290 (480)
T 3gip_A 226 ---------------VEAAVEEVLAIGRGTGCATVVSHHKCMMPQNWGRSRATLANIDRAREQGVEVALDIYPYPGSSTI 290 (480)
T ss_dssp ---------------HHHHHHHHHHHHHHHCCEEEETTCCCCSGGGTTTHHHHHHHHHHHHHTTCCEEEEECSCSCEEEE
T ss_pred ---------------HHHHHHHHHHHHHHhCCCEEEEEEeccCccchhhHHHHHHHHHHHHHcCCceEEEeeccccCcch
Confidence 2467788889999999999999998 4788999999999999999999999999887
Q ss_pred ccccCCCcccCceeEEc-------CCCCC-----------cccHHHHHHHHhc-----------------CCceEEecCC
Q 014320 324 SWLWHSDFVTAAKYVMS-------PPIRA-----------SGHNKALQAALAT-----------------GILQLVGTDH 368 (427)
Q Consensus 324 ~~~~~~~~~~~~~~~~~-------pplr~-----------~~~~~~l~~~l~~-----------------G~~~~lgSD~ 368 (427)
..+.+.+ .+.+++ ||++. ..+.+++++++.. +...++|||+
T Consensus 291 ~~l~~~~----~~~~~~~~~~~~~p~~~g~~~~~ia~~~~~~~~~a~~~~l~~g~i~~~~~~~~~~~~~~~~~~~~gsD~ 366 (480)
T 3gip_A 291 LIPERAE----TIDDIRITWSTPHPECSGEYLADIAARWGCDKTTAARRLAPAGAIYFAMDEDEVKRIFQHPCCMVGSDG 366 (480)
T ss_dssp CCGGGTT----TSSCCEEEEESSCGGGTTCBHHHHHHHHTSCHHHHHHHHCSEEEEECCCCHHHHHHHHHSTTEEECCCC
T ss_pred hhhcCHH----HHHHHhhccccCCCccCCCcHHHHHHHcCCCHHHHHHHhccCCeEEEeCCHHHHHHHHcCCCeEEecCC
Confidence 6654322 355556 88854 4456667655543 4456677776
Q ss_pred CCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHh-cCCCCHHHHHHHHchhhhcC
Q 014320 369 CAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVE-SGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 369 ~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~-~~~l~l~~~v~~~t~npA~~ 426 (427)
.++. ....+..+..++.++..++. ++.+|++++++++|.|||++
T Consensus 367 ~~~~--------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~t~~~a~~ 411 (480)
T 3gip_A 367 LPND--------------ARPHPRLWGSFTRVLGRYVREARLMTLEQAVARMTALPARV 411 (480)
T ss_dssp CTTC--------------SSCCTHHHHHHHHHHHCCCCCTCSSCHHHHHHHHTHHHHHH
T ss_pred cccC--------------CCCChhhhhhHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHH
Confidence 6543 12456677888888866665 47799999999999999974
No 20
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=99.97 E-value=7.7e-30 Score=254.15 Aligned_cols=313 Identities=17% Similarity=0.203 Sum_probs=204.5
Q ss_pred CCCccEEEECcEEEcCCC----ceeeeEEEeCCeEEEeeCCCCC--CCCceEEeCCCCEEeccccccccccccCcC-CC-
Q 014320 50 QSSSKILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNINV--GDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS- 121 (427)
Q Consensus 50 ~~~~~~~i~~~~i~~~~~----~~~~~i~i~~g~I~~vg~~~~~--~~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g~- 121 (427)
.|+.+++|+|++|+++++ ..+++|+|+||||++||+..+. .++.++||++|++|+|||||+|+|+.+... |.
T Consensus 3 ~~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~~~~viD~~g~~v~PGlID~H~Hl~~~~~~g~~ 82 (447)
T 4f0r_A 3 QSRYEKIISARWIITVETDGEVLENHAIAIRDGKIAAIIPAADAAGLEADERLELPDHVLMPGLINLHGHSAMSLLRGLA 82 (447)
T ss_dssp --CEEEEEEEEEEECCSSTTCEEEEEEEEEETTEEEEEEEHHHHTTSCEEEEEEEEEEEEEECEEEEEECGGGGGGTTSS
T ss_pred CCcccEEEECCEEEeeCCCCcEeeceEEEEECCEEEEEecccccccCCCCeEEeCCCcEEeeCccchhhChhhHhhccCC
Confidence 356789999999998653 4689999999999999985432 245789999999999999999999965421 11
Q ss_pred --------------------CChhhHHH----HHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccc
Q 014320 122 --------------------ETIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI 177 (427)
Q Consensus 122 --------------------~~~e~~~~----~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (427)
.++++++. ....++++||||+.|+.. ......+...+.+.+..+........
T Consensus 83 ~~~~~~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~----~~~~~~~~~~~~g~r~~~~~~~~~~~ 158 (447)
T 4f0r_A 83 DDKALMDWLTNYIWPTEGKHVHDDFVFDGSLLAMGEMIRGGTTTINDMYF----YNAAVARAGLASGMRTFVGCSILEFP 158 (447)
T ss_dssp CSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECBS----CHHHHHHHHHHHTCEEEEEEEECSSC
T ss_pred CCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEccc----CHHHHHHHHHHcCCeEEEEchhcCCC
Confidence 23343433 344578899999999843 23344555566665544444332111
Q ss_pred ---cCCChhhHHHHHHHHHH-cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcC
Q 014320 178 ---TKWDEVVSDEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELG 252 (427)
Q Consensus 178 ---~~~~~~~~~~~~~l~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G 252 (427)
....++.++.+.++.+. .+...+++.+.+++.+.++++.++++++.|+++|+++++|+ ++.+.+....+ ..|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~~~~~~~~~~~~---~~g 235 (447)
T 4f0r_A 159 TNYASNADDYIAKGMAERSQFLGEDLLTFTLAPHAPYTVSDDTFRKVVTLAEQEDMLIHCHIHETADEVNNSVK---EHG 235 (447)
T ss_dssp CSSCSSHHHHHHHHHHHHHTTTTCTTEEEEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHH---HHS
T ss_pred cccccCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCCCCHHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHH---HcC
Confidence 11223455556665532 36678899888888888999999999999999999999998 55455543322 222
Q ss_pred CCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcc
Q 014320 253 ITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFV 332 (427)
Q Consensus 253 ~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~ 332 (427)
.. .+ +.+......+.+..+.|+..... +.++++++.|+.+.. ||...+...
T Consensus 236 ~~----------------~i-~~~~~~g~~~~~~~~~H~~~~~~-~~~~~~~~~g~~~~~--~p~~~~~~~--------- 286 (447)
T 4f0r_A 236 QR----------------PL-ARLQRLGLLSPRLVAAHMVHLND-AEVELAARHGLSTAH--NPASNMKLA--------- 286 (447)
T ss_dssp SC----------------HH-HHHHHHTCCSTTEEEEECCSCCH-HHHHHHHHHTCEEEE--CHHHHHHTT---------
T ss_pred CC----------------HH-HHHHHcCCCCCCcEEEeccCCCH-HHHHHHHHcCCEEEE--CchhhhhcC---------
Confidence 21 00 11111222345678889887654 668888888876664 765322111
Q ss_pred cCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHH--hcCCC
Q 014320 333 TAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV--ESGQI 410 (427)
Q Consensus 333 ~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~--~~~~l 410 (427)
.. .+| ++++++.|+.+++|||+.+.+...+ ...+.++..++.... ...++
T Consensus 287 --~~---~~~---------~~~~~~~Gv~v~lgTD~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~l 338 (447)
T 4f0r_A 287 --SG---ISP---------VSKLMDAGVAVGIGTDGAASNNKLD--------------MLAETRLAALLAKVGTLDPTSV 338 (447)
T ss_dssp --CC---CCC---------HHHHHHTTCEEEECCCCGGGTCCCC--------------HHHHHHHHHHHHHHHHTCTTSS
T ss_pred --CC---CCc---------HHHHHHCCCcEEEeCCCCcCCCCCC--------------HHHHHHHHHHHhhhhccCCCCC
Confidence 01 133 5678999999999999865422111 112334444343332 24689
Q ss_pred CHHHHHHHHchhhhcC
Q 014320 411 SVTDYVRLTSTEWGRL 426 (427)
Q Consensus 411 ~l~~~v~~~t~npA~~ 426 (427)
|++++++++|.|||++
T Consensus 339 ~~~~al~~~T~n~A~~ 354 (447)
T 4f0r_A 339 PAAAAIRMATLNGARA 354 (447)
T ss_dssp CHHHHHHHHTHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999999974
No 21
>1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A
Probab=99.97 E-value=6.2e-30 Score=258.15 Aligned_cols=323 Identities=15% Similarity=0.150 Sum_probs=214.5
Q ss_pred ccEEEECcEEEcCCC--ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHH
Q 014320 53 SKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSG 130 (427)
Q Consensus 53 ~~~~i~~~~i~~~~~--~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~ 130 (427)
++++|+|++|+++.. ..+++|+|+||||++|++... +.+.++||++|++|+|||||+|+|+..+.. .. ..
T Consensus 21 ~~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~~iD~~g~~v~PG~iD~H~H~~~~~~--~~-----~~ 92 (496)
T 1rk6_A 21 FDYILSGGTVIDGTNAPGRLADVGVRGDRIAAVGDLSA-SSARRRIDVAGKVVSPGFIDSHTHDDNYLL--KH-----RD 92 (496)
T ss_dssp BSEEEESSEECCSSSCCCEECEEEEETTEEEEEECCTT-SCBSCEEECTTCEEEECEEESSCCCTTHHH--HC-----TT
T ss_pred ccEEEECCEEEeCCCCceeccEEEEECCEEEEecCCCC-CCCCeEEeCCCCEEecCEeeeeecCCcccc--cc-----HH
Confidence 468999999999865 467899999999999997542 234679999999999999999999876511 00 12
Q ss_pred HHHHHcCCceEEecCcC-----CCC-------------------CcHHHHHHHHHHHhccccceeceeccc---------
Q 014320 131 QAAALAGGTTMHIDFVI-----PIN-------------------GSLTAGFEAYEKKAKNSCMDYGFHMAI--------- 177 (427)
Q Consensus 131 ~~~~l~~GvTtv~d~~~-----~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 177 (427)
.+.++++||||++++.. +.. ......++..+. ....+++.+..+.
T Consensus 93 ~~~~~~~G~Tt~~~~~~g~~~~p~~~~~l~~~i~~~~~~~~~~~~~~~~~~e~~~~--~~~~~~~~~~~g~~~~~~~~~~ 170 (496)
T 1rk6_A 93 MTPKISQGVTTVVTGNCGISLAPLAHANPPAPLDLLDEGGSFRFARFSDYLEALRA--APPAVNAACMVGHSTLRAAVMP 170 (496)
T ss_dssp CHHHHTTTEEEEEESCTTCCSCSEECSSCCTTGGGGCSSSCCEESSHHHHHHHHHH--SCCSSEEEEEEEHHHHHHHHCS
T ss_pred HHHHHcCCeEEEEeCCCCCCCCCCChHHHHHhhcccCcccccCccCHHHHHHHHhc--cCCccceEEecccccceeeecc
Confidence 56789999999998742 100 011111222211 1223333322110
Q ss_pred ---cCCChhhHHHHHHHHH---HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHc
Q 014320 178 ---TKWDEVVSDEMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIEL 251 (427)
Q Consensus 178 ---~~~~~~~~~~~~~l~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~ 251 (427)
.....+.+++++++++ +.|+..++....+......+.+++.++++.++++|.++.+|+++....
T Consensus 171 ~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~el~~~~~~a~~~g~~v~~H~~~~~~~---------- 240 (496)
T 1rk6_A 171 DLRREATADEIQAMQALADDALASGAIGISTGAFYPPAAHASTEEIIEVCRPLITHGGVYATHMRDEGEH---------- 240 (496)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHHHHTCCEEEEETTSGGGTTCCHHHHHHHHTHHHHHTCEEEEECSCSSTT----------
T ss_pred ccccCCCHHHHHHHHHHHHHHHHcCCcEEeeccccCCCCCCCHHHHHHHHHHHHHcCCEEEEEeCCCccc----------
Confidence 0012233445555442 468888776543322234578889999999999999999999754211
Q ss_pred CCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcC---------CCHHHHHHHHHHhhcCCCEEEecCccceeeC
Q 014320 252 GITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV---------MSMDAMEEIAKARKAGQRVIGEPVVSGLVLD 322 (427)
Q Consensus 252 G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~---------~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~ 322 (427)
+..++.+.++++++.|++++++|+ ...+.++.++.+++.| .++++++|+++.++
T Consensus 241 ----------------~~~~l~~~~~~a~~~g~~v~i~H~~~~~~~~~g~~~~~~~~l~~a~~~g-~v~~~~~~~~~~~~ 303 (496)
T 1rk6_A 241 ----------------IVQALEETFRIGRELDVPVVISHHKVMGKLNFGRSKETLALIEAAMASQ-DVSLDAYPYVAGST 303 (496)
T ss_dssp ----------------HHHHHHHHHHHHHHHTSCEEECSCCCCSGGGTTTHHHHHHHHHHHHHHS-CEEEEECSCSCEEE
T ss_pred ----------------HHHHHHHHHHHHHHcCCeEEEEEEeccCCcchhhHHHHHHHHHHHHHcC-CeEEEEeccCCCCC
Confidence 235567777888889999999999 3445578888888899 99999999877655
Q ss_pred cccccCCCcccCceeEEcCC---C-----------CCcccHHHHHHHHhcCC-----------------ceEEecCCCCC
Q 014320 323 DSWLWHSDFVTAAKYVMSPP---I-----------RASGHNKALQAALATGI-----------------LQLVGTDHCAF 371 (427)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~pp---l-----------r~~~~~~~l~~~l~~G~-----------------~~~lgSD~~p~ 371 (427)
...+....-..+..+.++|+ + ++..+++++|+++++|+ .+++|||+.|+
T Consensus 304 ~~~~~~l~~~~~~~v~~~p~~~~l~~~~l~~~~~~~g~~~~~~l~~~l~~G~i~~~~~~~~v~~~~~~~~~~iGTD~~~~ 383 (496)
T 1rk6_A 304 MLKQDRVLLAGRTLITWCKPYPELSGRDLEEIAAERGKSKYDVVPELQPAGAIYFMMDEPDVQRILAFGPTMIGSDGLPH 383 (496)
T ss_dssp ECCCCTTTTSSCEEEEEESSCGGGTTCBHHHHHHHTTSCHHHHHHHHCSEEEEECCCCHHHHHHHHHSTTEEECCCCCTT
T ss_pred cccHHHhcCccceEEeccCCCcccccCcHHHHHHHcCCCHHHHHHHHHhcCceeecCCHHHHHHHHcCCCEEEecCCCCC
Confidence 43332110000123334343 2 56667899999999999 47999999876
Q ss_pred ChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHh-cCCCCHHHHHHHHchhhhcC
Q 014320 372 NSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVE-SGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 372 ~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~-~~~l~l~~~v~~~t~npA~~ 426 (427)
+. + .....+..++.++..++. .+.++++++++++|.||||+
T Consensus 384 ~~--~------------~~~~~~~~~~~~l~~~v~~~~~l~~~~~l~~~T~~~A~~ 425 (496)
T 1rk6_A 384 DE--R------------PHPRLWGTFPRVLGHYSRDLGLFPLETAVWKMTGLTAAK 425 (496)
T ss_dssp CS--S------------CCTHHHHHHHHHHCCCCCCTCSSCHHHHHHTTTHHHHHH
T ss_pred CC--C------------CCchhhccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHH
Confidence 41 1 022344466766644443 46699999999999999974
No 22
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=99.97 E-value=5.6e-29 Score=249.39 Aligned_cols=312 Identities=17% Similarity=0.153 Sum_probs=202.8
Q ss_pred CCccEEEECcEEEcCCC----------ceeeeEEEeCCeEEEeeCCCC-CCCCceEEeCCCCEEeccccccccccccCcC
Q 014320 51 SSSKILIKGGTVVNAHH----------QQIADVYVEDGIVVAVQPNIN-VGDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (427)
Q Consensus 51 ~~~~~~i~~~~i~~~~~----------~~~~~i~i~~g~I~~vg~~~~-~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~ 119 (427)
++++++|+|++|+++++ .++++|+|+||||++||+... .+++.++||++|++|+|||||+|+|+.+...
T Consensus 21 ~~~~~li~~~~v~~~~~~~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~ 100 (468)
T 3lnp_A 21 AHADLRINSHWIIPIENTTDHNLVSNILIDHCLLIKDGIILAIEPQSSCQIPATETLDLGQQVLMPGWVNAHGHAAMSLF 100 (468)
T ss_dssp CCEEEEEEEEEECCSSCC-----CCSCEEEEEEEEETTEEEEEEETTTCCCCEEEEEECCSEEEEECEEECSCCGGGGGG
T ss_pred ccccEEEECCEEEeecCCcccccCccEecceEEEEECCEEEEEeCCccccCCCCeEEeCCCcEEEeCeechhhChhhhhh
Confidence 35789999999998653 348899999999999998654 2346789999999999999999999965421
Q ss_pred -C---------------------CCChhhHHH----HHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceece
Q 014320 120 -G---------------------SETIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGF 173 (427)
Q Consensus 120 -g---------------------~~~~e~~~~----~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (427)
| ..++++++. ....++++||||+.|+... .....+...+.+.+..+....
T Consensus 101 ~g~~~~~~l~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~~~~~~g~r~~~~~~~ 176 (468)
T 3lnp_A 101 RGLADDLPLMTWLQEHVWPAEAQHVDEHFVKQGTELAIAEMIQSGTTTFADMYFY----PQQSGEAALAAGIRAVCFAPV 176 (468)
T ss_dssp TTSSCSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECCSC----HHHHHHHHHHHTCEEEEEEEE
T ss_pred ccCcCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcccC----HHHHHHHHHHcCCeEEEeccc
Confidence 1 123333332 3455799999999997432 234455556666555444433
Q ss_pred eccc---cCCChhhHHHHHHHHHH-cCCC-----eEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHH
Q 014320 174 HMAI---TKWDEVVSDEMEVMVKE-KGIN-----SFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFE 243 (427)
Q Consensus 174 ~~~~---~~~~~~~~~~~~~l~~~-~g~~-----~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~ 243 (427)
.... ....++.++...++.+. .+.. .+++.+.+++.+.++++.++++++.|+++|+++++|+ ++...+..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~ 256 (468)
T 3lnp_A 177 LDFPTNYAQNADEYIRKAIECNDRFNNHPMNEQGLVQIGFGPHAPYTVSDEPLKEITMLSDQLDMPVQIHLHETDFEVSE 256 (468)
T ss_dssp CSSCCSSCSSHHHHHHHHHHHHHHHHSCGGGTTCCEEEEEEECCTTTSCHHHHHHHHHHHHHHTCCEEEEESCSHHHHHH
T ss_pred cCCCcccccCHHHHHHHHHHHHHHhhcCCcccCceEEEEEEcCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHH
Confidence 2111 11223444555555432 3443 7888888888889999999999999999999999998 55455543
Q ss_pred HHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCc
Q 014320 244 GQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDD 323 (427)
Q Consensus 244 ~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~ 323 (427)
..+ ..|.. .+ +.+......+.+..+.|+..... +.++.+++.|+.+.. ||...+...
T Consensus 257 ~~~---~~g~~----------------~i-~~~~~~g~l~~~~~~~H~~~~~~-~~~~~l~~~g~~v~~--~p~s~~~~~ 313 (468)
T 3lnp_A 257 SLE---TFNKR----------------PT-QRLADIGFLNERVSCVHMTQVDD-GDIKILQKTGASIIH--CPESNLKLA 313 (468)
T ss_dssp HHH---HHSSC----------------HH-HHHHHTTCCSTTEEEEECCSCCH-HHHHHHHHHCCEEEE--CHHHHHHTT
T ss_pred HHH---HhCCC----------------HH-HHHHHcCCCCCCeEEEeccCCCH-HHHHHHHhcCCEEEE--ChhhhhhcC
Confidence 332 22211 00 01111122345678889877654 668888888876664 775322111
Q ss_pred ccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHH
Q 014320 324 SWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDT 403 (427)
Q Consensus 324 ~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~ 403 (427)
. ..+| ++++++.|+.+++|||+.+.+...+. -.+.++...+.+
T Consensus 314 -----------~---~~~~---------~~~~~~~Gv~v~lgtD~~~~~~~~~~--------------~~~~~~~~~~~~ 356 (468)
T 3lnp_A 314 -----------S---GFCP---------IAKLSAANIPLAIGTDGAASNNDLDM--------------FSETKTAALLAK 356 (468)
T ss_dssp -----------C---CCCC---------HHHHHHTTCCEEECCCCTTSSCCCCH--------------HHHHHHHHHHHH
T ss_pred -----------C---CCCC---------HHHHHHCCCeEEEECCCCcCCCCCCH--------------HHHHHHHHHHhh
Confidence 0 1133 56688999999999998654322111 123344443333
Q ss_pred HH--hcCCCCHHHHHHHHchhhhcC
Q 014320 404 MV--ESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 404 ~~--~~~~l~l~~~v~~~t~npA~~ 426 (427)
.. ...+++++++++++|.|||++
T Consensus 357 ~~~~~~~~l~~~~al~~~T~~~A~~ 381 (468)
T 3lnp_A 357 GVSQDASAIPAIEALTMATLGGARA 381 (468)
T ss_dssp HHHTCTTSSCHHHHHHHHTHHHHHH
T ss_pred hccCCCCcCCHHHHHHHHHHHHHHH
Confidence 22 256799999999999999974
No 23
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=99.97 E-value=7.5e-29 Score=249.19 Aligned_cols=315 Identities=17% Similarity=0.246 Sum_probs=200.8
Q ss_pred CccEEEECcEEE-cCC--C--ceeeeEEEeCCeEEEeeCCCCCC-CCceEEeCCCCEEeccccccccccccCcCCC----
Q 014320 52 SSKILIKGGTVV-NAH--H--QQIADVYVEDGIVVAVQPNINVG-DDVKVLDATGKFVMPGGIDPHTHLAMEFMGS---- 121 (427)
Q Consensus 52 ~~~~~i~~~~i~-~~~--~--~~~~~i~i~~g~I~~vg~~~~~~-~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~---- 121 (427)
|.+++|+|++++ +++ . ..+++|+|+||||++||+..+.+ ++.++||++|++|+|||||+|+|+.+.....
T Consensus 28 m~~~li~n~~vv~t~d~~~~~~~~~~V~I~~g~I~~Vg~~~~~~~~~~~viD~~g~~v~PGlID~H~Hl~~~~~rg~~~~ 107 (479)
T 3h4u_A 28 PKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAELPETADEVLDLRGHLVIPGLVNTHHHMYQSLTRAVPAA 107 (479)
T ss_dssp -CEEEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEEEGGGSCSCCSEEEECTTEEEEECEEECCCCGGGGGSCSCTTT
T ss_pred hhhheeECCeEEEeeCCCCceecccEEEEECCEEEEEeCCcccCCCCCeEEeCCCCEEecceeecccccchhhhcccccc
Confidence 578999999966 333 2 46899999999999999865443 4678999999999999999999998753211
Q ss_pred ------------------CChhhHHH----HHHHHHcCCceEEecCcCCCCC--cHHHHHHHHHHHhccccceeceecc-
Q 014320 122 ------------------ETIDDFFS----GQAAALAGGTTMHIDFVIPING--SLTAGFEAYEKKAKNSCMDYGFHMA- 176 (427)
Q Consensus 122 ------------------~~~e~~~~----~~~~~l~~GvTtv~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~- 176 (427)
.++++++. ....++++||||+.|+...... .....++...+.+.+..+..+....
T Consensus 108 ~~~~l~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~ 187 (479)
T 3h4u_A 108 QNAELFGWLTNLYKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNGSRLDDSIGAAQRIGMRFHASRGAMSVG 187 (479)
T ss_dssp TTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEECCBCCCCTTCCHHHHHHHHHHHTCEEEEEEEECC--
T ss_pred CCCCHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHhCCeEEEEECccccCCcchHHHHHHHHHHcCCEEEEEeeecccc
Confidence 23344433 3456789999999998533222 3555667777777664433322110
Q ss_pred ----------ccCCChhhHHHHHHHHHH-cC---CCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhH
Q 014320 177 ----------ITKWDEVVSDEMEVMVKE-KG---INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAV 241 (427)
Q Consensus 177 ----------~~~~~~~~~~~~~~l~~~-~g---~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~ 241 (427)
.....++.+++..++++. .+ ...+++.+.++..+.++++.++++++.|+++|+++++|+ ++..++
T Consensus 188 ~~~g~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~~ 267 (479)
T 3h4u_A 188 QRDGGLPPDSVVEREPDILRDTQRLIETYHDEGRYAMLRVVVAPCSPFSVSRDLMRDAAVLAREYGVSLHTHLAENVNDI 267 (479)
T ss_dssp --------------CHHHHHHHHHHHHHHCCCSTTCSEEEEEEESCTTSSCHHHHHHHHHHHHHHTCEEEEEESCSHHHH
T ss_pred cccccCCcccccccHHHHHHHHHHHHHHhhccCCCCceEEEEecCCCCCCCHHHHHHHHHHHHhcCCCEEEEeCCCHHHH
Confidence 011223455566666542 22 346788888888888999999999999999999999997 655444
Q ss_pred HHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceee
Q 014320 242 FEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVL 321 (427)
Q Consensus 242 ~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~ 321 (427)
....+. .|.. . .+.+......+.+..+.|+...+. +.++.+++.|+.+.. ||...+.
T Consensus 268 ~~~~~~---~g~~----------------~-~~~~~~~g~~~~~~~i~H~~~~~~-~~~~~l~~~g~~v~~--~p~s~~~ 324 (479)
T 3h4u_A 268 AYSREK---FGMT----------------P-AEYAEDLGWVGHDVWHAHCVQLDD-AGIGLFARTGTGVAH--CPCSNMR 324 (479)
T ss_dssp HC----------C----------------H-HHHHHHTTCCSTTEEEEECTTCCH-HHHHHHHHHTCEEEE--CHHHHHH
T ss_pred HHHHHH---cCCC----------------H-HHHHHHcCCCCCCeEEEEecCCCH-HHHHHHHHcCCeEEE--ChhHhhh
Confidence 333211 1110 0 011111222345678899887654 678888888876664 7754322
Q ss_pred CcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHH
Q 014320 322 DDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVW 401 (427)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~ 401 (427)
.. .. .+| ++++++.|+.+++|||+.+++...+. -.+.+....+
T Consensus 325 l~-----------~~---~~~---------~~~~~~~Gv~v~lgtD~~~~~~~~~~--------------~~~~~~~~~~ 367 (479)
T 3h4u_A 325 LA-----------SG---IAP---------VKKMRLAGVPVGLGVDGSASNDGAQM--------------VAEVRQALLL 367 (479)
T ss_dssp TT-----------CC---CCC---------HHHHHHTTCCEEECCCCTTSSCCCCH--------------HHHHHHHHHH
T ss_pred cC-----------CC---CCC---------HHHHHHCCCeEEEeCCCCccCCCcCH--------------HHHHHHHHHH
Confidence 11 11 233 56688999999999998654322211 1233333333
Q ss_pred HHHH-hcCCCCHHHHHHHHchhhhcC
Q 014320 402 DTMV-ESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 402 ~~~~-~~~~l~l~~~v~~~t~npA~~ 426 (427)
.... ....++++++++++|.|||++
T Consensus 368 ~~~~~~~~~l~~~~al~~~T~~~A~~ 393 (479)
T 3h4u_A 368 QRVGFGPDAMTAREALEIATLGGAKV 393 (479)
T ss_dssp HHHHHCTTSCCHHHHHHHTTHHHHHH
T ss_pred hcccCCCCCCCHHHHHHHHHHHHHHH
Confidence 2221 234599999999999999974
No 24
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=99.97 E-value=2.7e-29 Score=250.43 Aligned_cols=313 Identities=16% Similarity=0.163 Sum_probs=204.0
Q ss_pred CCCccEEEECcEEEcCCC----ceeeeEEEeCCeEEEeeCCCC--CCCCceEEeCCCCEEeccccccccccccCcCC---
Q 014320 50 QSSSKILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNIN--VGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG--- 120 (427)
Q Consensus 50 ~~~~~~~i~~~~i~~~~~----~~~~~i~i~~g~I~~vg~~~~--~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g--- 120 (427)
.++.+++|+|++|+++++ ..+++|+|+||||++||+..+ .+++.++||++|++|+|||||+|+|+.+....
T Consensus 5 ~~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~ig~~~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~g~~ 84 (451)
T 4dyk_A 5 RNPFDLLLLPTWIVPVEPAGVVLRDHALGIRDGQIALVAPREQAMRHGATEIRELPGMLLAPGLVNAHGHSAMSLFRGLA 84 (451)
T ss_dssp -CCEEEEEEEEEECCSSSTTCCEESEEEEEETTEEEEEEEHHHHTTTCEEEEEEEEEEEEEECEEECCCCGGGGGGTTSS
T ss_pred cchhcEEEECCEEEeeCCCCcEEeccEEEEECCEEEEEeCccccccCCCCeEEeCCCCEEeecccchhhChhhHHhccCC
Confidence 346789999999999653 367999999999999997542 23457899999999999999999999654221
Q ss_pred -------------------CCChhhHHHHH----HHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccc
Q 014320 121 -------------------SETIDDFFSGQ----AAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI 177 (427)
Q Consensus 121 -------------------~~~~e~~~~~~----~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (427)
..++++++..+ ..++++|||++.|+... .....+...+.+.+..+........
T Consensus 85 ~~~~l~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~----~~~~~~a~~~~g~r~~~~~~~~~~~ 160 (451)
T 4dyk_A 85 DDLPLMTWLQDHIWPAEGQWVSEDFIRDGTELAIAEQVKGGITCFSDMYFY----PQAICGVVHDSGVRAQVAIPVLDFP 160 (451)
T ss_dssp CSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEEECSC----HHHHHHHHHHHTCEEEEEEEECSSC
T ss_pred CCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcccC----HHHHHHHHHHcCCeEEEEchhhCCC
Confidence 12344444433 44579999999998422 2344555566665554443332111
Q ss_pred ---cCCChhhHHHHHHHHHH-cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcC
Q 014320 178 ---TKWDEVVSDEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELG 252 (427)
Q Consensus 178 ---~~~~~~~~~~~~~l~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G 252 (427)
....++.+++..++.+. .+...+++.+.++..+.++++.++++++.|+++|+++++|+ ++.+.+....+. .|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~---~g 237 (451)
T 4dyk_A 161 IPGARDSAEAIRQGMALFDDLKHHPRIRIAFGPHAPYTVSDDKLEQILVLTEELDASIQMHVHETAFEVEQAMER---NG 237 (451)
T ss_dssp BTTBSSHHHHHHHHHHHHHHTTTCSSEEEEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHH---HS
T ss_pred CccccCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCccCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHH---hC
Confidence 11223445555555543 46677888889998889999999999999999999999997 555555443321 22
Q ss_pred CCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcc
Q 014320 253 ITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFV 332 (427)
Q Consensus 253 ~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~ 332 (427)
.. .+ +.+......+.+..+.|+..... +.++.+++.|+.+.+ ||...+...
T Consensus 238 ~~----------------~i-~~~~~~g~~~~~~~~~H~~~~~~-~~~~~l~~~g~~v~~--~p~s~~~~~--------- 288 (451)
T 4dyk_A 238 ER----------------PL-ARLHRLGLLGPRFQAVHMTQVDN-DDLAMLVETNSSVIH--CPESNLKLA--------- 288 (451)
T ss_dssp SC----------------HH-HHHHHTTCCSTTEEEEECCCCCH-HHHHHHHHHTCEEEE--CHHHHHHTT---------
T ss_pred CC----------------HH-HHHHHCCCCCCCeEEEECCCCCH-HHHHHHHHcCCEEEE--Chhhhhhcc---------
Confidence 10 00 01111122345678889887654 668888888876665 775322111
Q ss_pred cCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHH--hcCCC
Q 014320 333 TAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV--ESGQI 410 (427)
Q Consensus 333 ~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~--~~~~l 410 (427)
. ..+| ++++++.|+.+++|||+.+.+...+. -.+.++..++.+.. ...++
T Consensus 289 --~---~~~~---------~~~~~~~Gv~v~lgtD~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~ 340 (451)
T 4dyk_A 289 --S---GFCP---------VEKLWQAGVNVAIGTDGAASNNDLDL--------------LGETRTAALLAKAVYGQATAL 340 (451)
T ss_dssp --C---CCCC---------HHHHHHHTCCEEECCCCGGGSSCCCH--------------HHHHHHHHHHHHHHHTCTTSS
T ss_pred --C---Cccc---------HHHHHhCCCeEEEECCCCccCCCCCH--------------HHHHHHHHHHhhhhcCCCCCC
Confidence 0 1233 56688899999999998654221111 12334444332222 24679
Q ss_pred CHHHHHHHHchhhhcC
Q 014320 411 SVTDYVRLTSTEWGRL 426 (427)
Q Consensus 411 ~l~~~v~~~t~npA~~ 426 (427)
+++++++++|.|||++
T Consensus 341 ~~~~al~~~T~~~A~~ 356 (451)
T 4dyk_A 341 DAHRALRMATLNGARA 356 (451)
T ss_dssp CHHHHHHHHTHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999999974
No 25
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9
Probab=99.97 E-value=1e-28 Score=249.10 Aligned_cols=314 Identities=16% Similarity=0.158 Sum_probs=184.0
Q ss_pred CccEEEECcE-EEcCC--------CceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcC-CC
Q 014320 52 SSKILIKGGT-VVNAH--------HQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS 121 (427)
Q Consensus 52 ~~~~~i~~~~-i~~~~--------~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g~ 121 (427)
+++++|+|++ |++++ ...+++|+|+||||++||+..+ +++.++||++|++|+|||||+|+|+..+.. +.
T Consensus 9 ~~~~li~n~~~i~~~~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~-~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~g~ 87 (492)
T 2paj_A 9 QPSTLIRNAAAIMTGGRGTADDPSRVPGPDIRIVGDTIDAIGALAP-RPGETIVDATDCVIYPAWVNTHHHLFQSLLKGE 87 (492)
T ss_dssp -CEEEEECBSEEBCCCCSSSSSCSBCCCCCEEEETTEEEEESSCCC-CTTCEEEECBTCEEEECEECCCCCGGGGGCCSC
T ss_pred CCCeEEECCEEEEecCCccccccceecccEEEEECCEEEEEcCCCC-CCCCeEEECCCcEEeeCccccccChhhHhhcCc
Confidence 3578999999 99976 2357899999999999998643 345689999999999999999999876521 10
Q ss_pred ----------------------CChhhHHHHHHH----HHcCCceEEecCcCCCCC-----cHHHHHHHHHHHhccccce
Q 014320 122 ----------------------ETIDDFFSGQAA----ALAGGTTMHIDFVIPING-----SLTAGFEAYEKKAKNSCMD 170 (427)
Q Consensus 122 ----------------------~~~e~~~~~~~~----~l~~GvTtv~d~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 170 (427)
.++++++..++. ++++||||++|+....+. ......+...+.+.+....
T Consensus 88 ~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~ 167 (492)
T 2paj_A 88 PAGLDATLTPWLAATPYRFRALFDERRFRLAARIGLIELARSGCATVADHNYVYYPGMPFDSSAILFEEAEKLGLRFVLL 167 (492)
T ss_dssp C-----------------CGGGCCHHHHHHHHHHHHHHHHTTTEEEEEECCCCCCTTCSSCHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCCHHHHHHhcccchhhcCCHHHHHHHHHHHHHHHHhcCcEEEEechhhcccccccchHHHHHHHHHHcCCEEEEE
Confidence 234666655555 899999999998632211 1222333333333332221
Q ss_pred ecee-------cccc-----CCChhhHHHHHHHHHHc-CC---CeEEEEEecCCC-ccCCHHHHHHHHHHHHHcCCcEEE
Q 014320 171 YGFH-------MAIT-----KWDEVVSDEMEVMVKEK-GI---NSFKFFMAYKGS-FMINDELLIEGFKRCKSLGALAMV 233 (427)
Q Consensus 171 ~~~~-------~~~~-----~~~~~~~~~~~~l~~~~-g~---~~ik~~~~~~~~-~~~~~~~l~~~~~~a~~~g~~v~~ 233 (427)
.+.. +... ...++.+++++++.+.. +. ..+++++++++. +.++++.++++++.|++.|+++++
T Consensus 168 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~ 247 (492)
T 2paj_A 168 RGGATQTRQLEADLPTALRPETLDAYVADIERLAARYHDASPRAMRRVVMAPTTVLYSISPREMRETAAVARRLGLRMHS 247 (492)
T ss_dssp ECCCSCCCSCSTTSCGGGCCCCHHHHHHHHHHHHHHTCCCSTTCSEEEEECCTTTTTSSCHHHHHHHHHHHHHTTCEEEE
T ss_pred chhhcccccccccCCccccccCHHHHHHHHHHHHHHhccCCCCCceEEEEecccCCCCCCHHHHHHHHHHHHHcCCcEEE
Confidence 1111 0000 01123455566666432 21 347888888777 788999999999999999999999
Q ss_pred ecCC-hhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEE
Q 014320 234 HAEN-GDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIG 312 (427)
Q Consensus 234 H~e~-~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~ 312 (427)
|+.+ ..+++...+ ..|.. .+... ......+.+..+.|+..... +.++++++.|+.+
T Consensus 248 H~~~~~~~~~~~~~---~~g~~----------------~~~~~-~~~g~~~~~~~i~H~~~~~~-~~i~~l~~~gv~v-- 304 (492)
T 2paj_A 248 HLSETVGYQDSAYS---MYGKS----------------PVAFC-GEHDWLGSDVWYAHLVKVDA-DEIALLAQTGTGV-- 304 (492)
T ss_dssp ECC----------------CCC----------------HHHHH-HHTTCCSTTEEEESCCSCCH-HHHHHHHHHTCEE--
T ss_pred EeCCChHHHHHHHH---HcCCC----------------HHHHH-HHCCCCCCCcEEEEEecCCH-HHHHHHHHcCCEE--
Confidence 9865 333433221 11210 00000 11111233566788876543 5578888888654
Q ss_pred ecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCch
Q 014320 313 EPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNG 392 (427)
Q Consensus 313 ~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~ 392 (427)
.+||...+. .+ ...||+|. +++.|+++++|||+.+++...+ ++.
T Consensus 305 ~~~p~~~~~-----------l~---~~~~p~~~---------~~~~Gv~v~lgTD~~~~~~~~~------~~~------- 348 (492)
T 2paj_A 305 AHCPQSNGR-----------LG---SGICPVRE---------MADAGVPVSIGVDGAASNEAAD------MIS------- 348 (492)
T ss_dssp EECHHHHHC-----------C--------CCTT---------HHHHTCCEEECCCHHHHCSCCS------HHH-------
T ss_pred EECchhhcc-----------cC---CCCCCHHH---------HHHCCCcEEEeCCCCCCCCCCC------HHH-------
Confidence 457742210 01 12478877 8888999999999855321111 111
Q ss_pred hhHhHHHHHHHH----------------HhcCCCCHHHHHHHHchhhhcC
Q 014320 393 IEERMHLVWDTM----------------VESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 393 ~e~~l~~~~~~~----------------~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+.+....+... +..+++|++++++++|.|||++
T Consensus 349 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~aT~~~A~~ 397 (492)
T 2paj_A 349 -EVHMTWLAQRARLGMLAQPAYRGGSFEGGAGAASIAEVIHWGTAGGARV 397 (492)
T ss_dssp -HHHHHHHHHHHTC-------------------CCHHHHHHHHTHHHHHH
T ss_pred -HHHHHHHHhhhhcccccccccccccccCCcCcCCHHHHHHHHHHHHHHH
Confidence 11111111111 1235699999999999999974
No 26
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=99.96 E-value=1.9e-29 Score=247.68 Aligned_cols=300 Identities=14% Similarity=0.074 Sum_probs=191.0
Q ss_pred cEEEECcEEEcCCC---ceeeeEEEeCCeEEEeeCCC-CCCCCceEEeCCCCEEeccccccccccccCcCCC------CC
Q 014320 54 KILIKGGTVVNAHH---QQIADVYVEDGIVVAVQPNI-NVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS------ET 123 (427)
Q Consensus 54 ~~~i~~~~i~~~~~---~~~~~i~i~~g~I~~vg~~~-~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~------~~ 123 (427)
+++|+|++|+++++ ..+++|+|+||||++|++.. ..+++.++||++|++|+|||||+|+|+....... .+
T Consensus 3 ~~~i~~~~i~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~ 82 (403)
T 3gnh_A 3 IKAVSAARLLDVASGKYVDNPLVIVTDGRITSIGKKGDAVPAGATAVDLPGVTLLPGLIDMHVHLDSLAEVGGYNSLEYS 82 (403)
T ss_dssp EEEEEEEEEEETTTTEEEESEEEEEETTEEEEEEETTSCCCTTCEEEEEEEEEEEECEEEEEECTTCCTTCCSGGGGGSC
T ss_pred cEEEEccEEEECCCCcccCCCEEEEECCEEEEEeCCCCCCCCCCeEEECCCCEEcCCeEeeeEccccCcccchhhhhcCC
Confidence 58999999999875 26789999999999999865 3355779999999999999999999998652111 11
Q ss_pred hhhH----HHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhc----cccceec------eec--------------
Q 014320 124 IDDF----FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK----NSCMDYG------FHM-------------- 175 (427)
Q Consensus 124 ~e~~----~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~----~~~~~~~------~~~-------------- 175 (427)
++.. ...++.++++||||++|++... .....++...+.+. +...... .+.
T Consensus 83 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~--~~~~~~~~~~~~g~~~gpr~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 160 (403)
T 3gnh_A 83 DRFWSVVQTANAKKTLEAGFTTVRNVGAAD--YDDVGLREAIDAGYVPGPRIVTAAISFGATGGHCDSTFFPPSMDQKNP 160 (403)
T ss_dssp HHHHHHHHHHHHHHHHHTTEEEEEECCCST--THHHHHHHHHHTTSSCCCEEEECCSCEESTTSTTSCCSSCGGGCCCCT
T ss_pred HHHHHHHHHHHHHHHHhCCeeEEEeCCCCc--cccHHHHHHHHCCCCCCCeEEecCcccccCCCCcccccCchhhcccCC
Confidence 2221 1234678999999999986532 12233333333332 2111110 010
Q ss_pred cccCCChhhHHHHHHHHHHcCCCeEEEEEe--------cCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHH
Q 014320 176 AITKWDEVVSDEMEVMVKEKGINSFKFFMA--------YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKR 247 (427)
Q Consensus 176 ~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~--------~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~ 247 (427)
......++..+.++++. +.|++.+|++.+ +.+.+.+++++++++++.|+++|+++++|+.+...+...
T Consensus 161 ~~~~~~~~~~~~~~~~~-~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~i~~~--- 236 (403)
T 3gnh_A 161 FNSDSPDEARKAVRTLK-KYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAHAHGASGIREA--- 236 (403)
T ss_dssp TCCCSHHHHHHHHHHHH-HTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHH---
T ss_pred cccCCHHHHHHHHHHHH-HcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---
Confidence 01122345566667766 689999999985 345667899999999999999999999999776544221
Q ss_pred HHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCccccc
Q 014320 248 MIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLW 327 (427)
Q Consensus 248 l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~ 327 (427)
. +.|.. .+.|+...+. +.++++++.|+.+.+ +|....+......
T Consensus 237 -~-------------------------------~~g~~-~i~H~~~~~~-~~~~~~~~~g~~~~~--~~~~~~~~~~~~~ 280 (403)
T 3gnh_A 237 -V-------------------------------RAGVD-TIEHASLVDD-EGIKLAVQKGAYFSM--DIYNTDYTQAEGK 280 (403)
T ss_dssp -H-------------------------------HTTCS-EEEECTTCCH-HHHHHHHHHTCEEEC--CCSTHHHHHHHHH
T ss_pred -H-------------------------------HhCCC-EEecCCcCCH-HHHHHHHHCCCEEEe--eechhhhhhhhcc
Confidence 1 12333 4888876554 778888999976664 4432111100000
Q ss_pred CCCcccCceeEEcCCCC-------CcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHH
Q 014320 328 HSDFVTAAKYVMSPPIR-------ASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLV 400 (427)
Q Consensus 328 ~~~~~~~~~~~~~pplr-------~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~ 400 (427)
..+ .|+-. .......++.+++.|+.+++|||+. ..+. +....+..
T Consensus 281 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~v~~gTD~~-~~~~--------------~~~~~e~~---- 332 (403)
T 3gnh_A 281 KNG---------VLEDNLRKDRDIGELQRENFRKALKAGVKMVYGTDAG-IYPH--------------GDNAKQFA---- 332 (403)
T ss_dssp HHT---------CCHHHHHHHHHHHHHHHHHHHHHHHHTCEEECCCCBT-TBCT--------------TCGGGHHH----
T ss_pred ccC---------CCHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEecCCC-CCCC--------------CchHHHHH----
Confidence 000 01100 0012245778889999999999973 2211 11111211
Q ss_pred HHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 401 WDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 401 ~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
...+.++|+.++++++|.|||++
T Consensus 333 ---~~~~~gl~~~~al~~aT~~~A~~ 355 (403)
T 3gnh_A 333 ---VMVRYGATPLQAIQSATLTAAEA 355 (403)
T ss_dssp ---HHHHTTCCHHHHHHHTTHHHHHH
T ss_pred ---HHHHcCCCHHHHHHHHHHHHHHH
Confidence 11235799999999999999974
No 27
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=99.96 E-value=6e-29 Score=249.43 Aligned_cols=311 Identities=19% Similarity=0.198 Sum_probs=203.8
Q ss_pred CccEEEECcEEEcCCC----ceeeeEEEeCCeEEEeeCCCCCC---CCceEEeCCCCEEeccccccccccccCcC-C---
Q 014320 52 SSKILIKGGTVVNAHH----QQIADVYVEDGIVVAVQPNINVG---DDVKVLDATGKFVMPGGIDPHTHLAMEFM-G--- 120 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~----~~~~~i~i~~g~I~~vg~~~~~~---~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g--- 120 (427)
+.+++|+|++|+++++ .++++|+|+||||++||+..+.+ ++.++||++|++|+|||||+|+|+.++.. +
T Consensus 13 ~~d~li~~~~v~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~~~viD~~g~~v~PGlID~H~Hl~~~~~~g~~~ 92 (472)
T 4dzh_A 13 PCDLLIEAGYVVPIEPHAVVLEDHAVAVSNGVIVAVLPTADARVRFAPARTVSRPDAALMPGLVNAHTHNPMTLLRGVAD 92 (472)
T ss_dssp EEEEEEEEEEECCSSSTTCCEEEEEEEEETTEEEEEEEHHHHHHHEEEEEEEEEEEEEEEECEEEEEECGGGGGGTTSSC
T ss_pred cCcEEEECCEEEecCCCCcEecceEEEEECCEEEEEeCchhhhhcCCCCeEEeCCCcEEEECccccccChhhHHhccccC
Confidence 4678999999998653 46899999999999999754322 35689999999999999999999977421 1
Q ss_pred ------------------CCChhhHHH----HHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccc-
Q 014320 121 ------------------SETIDDFFS----GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI- 177 (427)
Q Consensus 121 ------------------~~~~e~~~~----~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 177 (427)
..++++++. +...++++||||+.|++. .....++...+.+.+..+.+......
T Consensus 93 ~~~l~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~----~~~~~~~a~~~~g~r~~~~~~~~~~~~ 168 (472)
T 4dzh_A 93 DLPLMVWLQQHIWPVEAAVIGPEFVADGTTLAIAEMLRGGTTCVNENYF----FADVQAAVYKQHGFRALVGAVIIDFPT 168 (472)
T ss_dssp SCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEEECS----CHHHHHHHHHHTTCEEEEEEEECSSCC
T ss_pred CCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEccc----CHHHHHHHHHHhCCeEEEEecccCCCc
Confidence 122333333 234479999999999862 23344555566665544444332211
Q ss_pred --cCCChhhHHHHHHHHHH-cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcCC
Q 014320 178 --TKWDEVVSDEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGI 253 (427)
Q Consensus 178 --~~~~~~~~~~~~~l~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~ 253 (427)
....++.++++.++.+. .+...+++.++++..+.++++.++++++.|+++|+++++|+ ++..++....+. .|.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~e~~~~~~~~~~~---~g~ 245 (472)
T 4dzh_A 169 AWASSDDEYFARAGELHDQWRDDPLISTAFAPHAPYTVNDANFERVRMLADQLDMPVHLHTHETAQEVADSVAQ---YGQ 245 (472)
T ss_dssp SSCSSHHHHHHHHHHHHHHHTTCSSEEEEEEECCTTTSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHH---HSS
T ss_pred ccccCHHHHHHHHHHHHHHhCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH---hCC
Confidence 11224455555555542 35667888889988888999999999999999999999997 665555443322 221
Q ss_pred CCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCccc
Q 014320 254 TGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVT 333 (427)
Q Consensus 254 ~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~ 333 (427)
. .+ +.+......+.+..+.|+..... +.++.+++.|+.+.+ ||...+...
T Consensus 246 ~----------------~i-~~~~~~g~~~~~~~~~H~~~l~~-~~i~~l~~~g~~v~~--~p~s~~~~~---------- 295 (472)
T 4dzh_A 246 R----------------PL-ARLDRLGLVNDRLIAVHMTQLTE-AEIHLCAERGVSVVH--CPESNLKLA---------- 295 (472)
T ss_dssp C----------------HH-HHHHHHTCCSTTEEEEECCSCCH-HHHHHHHHHTCEEEE--CHHHHHHTT----------
T ss_pred C----------------HH-HHHHHcCCCCCCeEEEeccCCCH-HHHHHHHHcCCEEEE--ChHHHHhcC----------
Confidence 0 01 11112223345778899887664 668888888977665 775332111
Q ss_pred CceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHH--hcCCCC
Q 014320 334 AAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV--ESGQIS 411 (427)
Q Consensus 334 ~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~--~~~~l~ 411 (427)
.. .+| ++++++.|+.+++|||+.+.+...+. -.+.++...+.... ...+++
T Consensus 296 -~~---~~~---------~~~~~~~Gv~v~lgtD~~~~~~~~~~--------------~~~~~~a~~~~~~~~~~~~~l~ 348 (472)
T 4dzh_A 296 -SG---FCP---------ACALQRASVNLAIGTDGCASNNDLDM--------------FSENRTAAILAKAVANDATALD 348 (472)
T ss_dssp -CC---CCC---------HHHHHHTTCEEEECCCCTTSSCCCCH--------------HHHHHHHHHHHHHHHTCTTSSC
T ss_pred -CC---Ccc---------HHHHHHCCCCEEEECCCCcCCCCCCH--------------HHHHHHHHHHhhhhcCCCCcCC
Confidence 11 133 56688999999999998643222111 12334433332222 235799
Q ss_pred HHHHHHHHchhhhcC
Q 014320 412 VTDYVRLTSTEWGRL 426 (427)
Q Consensus 412 l~~~v~~~t~npA~~ 426 (427)
++++++++|.|||+.
T Consensus 349 ~~~al~~~T~~~A~~ 363 (472)
T 4dzh_A 349 AATTLRAATLGGARA 363 (472)
T ss_dssp HHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999974
No 28
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*
Probab=99.96 E-value=3.4e-28 Score=242.75 Aligned_cols=311 Identities=18% Similarity=0.161 Sum_probs=196.9
Q ss_pred EEEECc-EEEcCCC----ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCC---------
Q 014320 55 ILIKGG-TVVNAHH----QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG--------- 120 (427)
Q Consensus 55 ~~i~~~-~i~~~~~----~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g--------- 120 (427)
++|+|+ .|++.++ ..+++|+|+||||++||+..+.+++.++||++|++|+|||||+|+|+.++...
T Consensus 2 ~li~n~~~v~t~d~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~g~~~~~~~~ 81 (456)
T 3ls9_A 2 ILIRGLTRVITFDDQERELEDADILIDGPKIVAVGKDLSDRSVSRTIDGRGMIALPGLINSHQHLYEGAMRAIPQLERVT 81 (456)
T ss_dssp EEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEESSCCCTTCSEEEECTTEEEEECEEEEEECGGGGGGBTCGGGSSCC
T ss_pred EEEEcCcEEEEcCCCCceeccceEEEECCEEEEeCCCCCCCCCCeEEeCCCCEEecCeeecccccchhhhcccccCCCCC
Confidence 689999 6777664 36899999999999999875544567899999999999999999999754221
Q ss_pred -------------------CCChhhHHH----HHHHHHcCCceEEecCcCCCCC-----cHHHHHHHHHHHhccccceec
Q 014320 121 -------------------SETIDDFFS----GQAAALAGGTTMHIDFVIPING-----SLTAGFEAYEKKAKNSCMDYG 172 (427)
Q Consensus 121 -------------------~~~~e~~~~----~~~~~l~~GvTtv~d~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 172 (427)
..++++++. ....++++||||+.|+...... .....++...+.+.+..+..+
T Consensus 82 l~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~a~~~~g~r~~~~~~ 161 (456)
T 3ls9_A 82 MASWLEGVLTRSAGWWRDGKFGPDVIREVARAVLLESLLGGITTVADQHLFFPGATADSYIDATIEAATDLGIRFHAARS 161 (456)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHTTEEEEEEEECCCCSSSCCTHHHHHHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHhccccccccccccCCHHHHHHHHHHHHHHHHhCCeeEEEeccccccCcccchhHHHHHHHHHHcCCEEEEEcc
Confidence 122233322 3345799999999998432211 233445666666655443332
Q ss_pred eecc-----------ccCCChhhHHHHHHHHHH-cC---CCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-C
Q 014320 173 FHMA-----------ITKWDEVVSDEMEVMVKE-KG---INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-E 236 (427)
Q Consensus 173 ~~~~-----------~~~~~~~~~~~~~~l~~~-~g---~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e 236 (427)
.... .....++.+++..++++. .+ ...+++.+.+++.+.++++.++++++.|+++|+++++|+ +
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e 241 (456)
T 3ls9_A 162 SMTLGKSEGGFCDDLFVEPVDRVVQHCLGLIDQYHEPEPFGMVRIALGPCGVPYDKPELFEAFAQMAADYDVRLHTHFYE 241 (456)
T ss_dssp CCCCCGGGTCSSCGGGCCCHHHHHHHHHHHHHHHCCCSTTCSEEEEECCCCTTTSCHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred ccccccccccCCccccccCHHHHHHHHHHHHHHhhCcCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 2110 001123445555665543 33 456788888888889999999999999999999999998 4
Q ss_pred ChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCc
Q 014320 237 NGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVV 316 (427)
Q Consensus 237 ~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p 316 (427)
+... ....+. .|.. . .+.+......+.+..+.|+..... +.++.+++.|+.+.. ||
T Consensus 242 ~~~~-~~~~~~---~~~~----------------~-~~~~~~~g~~~~~~~i~H~~~~~~-~~~~~l~~~g~~~~~--~p 297 (456)
T 3ls9_A 242 PLDA-GMSDHL---YGMT----------------P-WRFLEKHGWASDRVWLAHAVVPPR-EEIPEFADAGVAIAH--LI 297 (456)
T ss_dssp TTHH-HHHHHH---HSSC----------------H-HHHHHHTTCSSTTEEEEECCSCCG-GGHHHHHHHTCEEEE--CH
T ss_pred CchH-HHHHHH---hCCC----------------H-HHHHHHcCCCCCCcEEEeccCCCH-HHHHHHHHcCCEEEE--Ch
Confidence 4433 333221 1210 0 011111222345677888876654 567888888876664 77
Q ss_pred cceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHh
Q 014320 317 SGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEER 396 (427)
Q Consensus 317 ~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~ 396 (427)
.+..... .. .+| ++++++.|+++++|||+.+.+...+. -.+.+
T Consensus 298 ~s~~~l~-----------~~---~~~---------~~~~~~~Gv~v~lgtD~~~~~~~~~~--------------~~~~~ 340 (456)
T 3ls9_A 298 APDLRMG-----------WG---LAP---------IREYLDAGITVGFGTTGSASNDGGNL--------------LGDLR 340 (456)
T ss_dssp HHHHHTT-----------CC---CCC---------HHHHHHTTCEEEECCCCTTSSCCCCH--------------HHHHH
T ss_pred hHHhhcC-----------CC---cch---------HHHHHHCCCcEEEECCCCccCCCCCH--------------HHHHH
Confidence 5432211 11 233 46688999999999998654322111 11333
Q ss_pred HHHHHHHHHhcC----CCCHHHHHHHHchhhhcC
Q 014320 397 MHLVWDTMVESG----QISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 397 l~~~~~~~~~~~----~l~l~~~v~~~t~npA~~ 426 (427)
+...+....... +++++++++++|.|||++
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~al~~~T~~~A~~ 374 (456)
T 3ls9_A 341 LAALAHRPADPNEPEKWLSARELLRMATRGSAEC 374 (456)
T ss_dssp HHHHHTGGGSTTCGGGSCCHHHHHHHTTHHHHHH
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHHH
Confidence 333221111111 799999999999999974
No 29
>2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9
Probab=99.96 E-value=2.8e-28 Score=242.27 Aligned_cols=316 Identities=16% Similarity=0.083 Sum_probs=193.1
Q ss_pred CccEEEECcEEEcCCC-----ceeeeEEEeCCeEEEeeCCCCCC-CCceEEeCCCCEEeccccccccccccCcC-CC---
Q 014320 52 SSKILIKGGTVVNAHH-----QQIADVYVEDGIVVAVQPNINVG-DDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS--- 121 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~-----~~~~~i~i~~g~I~~vg~~~~~~-~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g~--- 121 (427)
|.+++|+|++|++++. ..+++|+|+||||++||+....+ ++.++||++|++|+|||||+|+|+.++.. |.
T Consensus 8 m~~~li~~~~v~~~~~~~~~~~~~~~v~I~~g~I~~ig~~~~~~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~g~~~~ 87 (439)
T 2i9u_A 8 INLKIFKGNLIFTKTSDKFTIMKDSYIVVIDGKIASVSSNLPDKYKGNPIIDFRNNIIIPGMNDLHAHASQYKNLGIGMD 87 (439)
T ss_dssp -CEEEEEEEEEEEEETTEEEEEEEEEEEEETTEEEEEESSCCGGGTTSCEEEEEEEEEEECEEEEEEEGGGGGGTTCCCS
T ss_pred cccEEEEeeEEEecCCccceEEeccEEEEECCEEEEecccccccCCCceEEcCCCeEEEecceecccccchHhhhCCcCC
Confidence 5678999999999762 35789999999999999643221 34579999999999999999999986421 10
Q ss_pred -C-----------------ChhhHHHH----HHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceec---c
Q 014320 122 -E-----------------TIDDFFSG----QAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHM---A 176 (427)
Q Consensus 122 -~-----------------~~e~~~~~----~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 176 (427)
. ++++++.. .+.++++||||++|+...........++...+.+.+..+...... +
T Consensus 88 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~~p 167 (439)
T 2i9u_A 88 KELLPWLNNYTFPEEAKFLNVDYAKKTYGRLIKDLIKNGTTRVALFATLHKDSTIELFNMLIKSGIGAYVGKVNMDYNCP 167 (439)
T ss_dssp SCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSCHHHHHHHHHHHHHHTCEEEEECEECCSSCC
T ss_pred CCHHHHHHhcccchhhccCCHHHHHHHHHHHHHHHHhcCceEEEEccccccchHHHHHHHHHHcCCEEEEEeeeccccCC
Confidence 0 12233322 357899999999997532111233445555555544322211111 1
Q ss_pred --ccCCChhhHHHHHHHHHH--cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecC-ChhhHHHHHHHHHHc
Q 014320 177 --ITKWDEVVSDEMEVMVKE--KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE-NGDAVFEGQKRMIEL 251 (427)
Q Consensus 177 --~~~~~~~~~~~~~~l~~~--~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e-~~~~~~~~~~~l~~~ 251 (427)
.....++..++..++++. .+...++++++++....++++.++++++.|+++|+++++|+. +..++....+ ..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~---~~ 244 (439)
T 2i9u_A 168 DYLTENYITSLNDTEEIILKYKDKSNIVKPIITPRFVPSCSNELMDGLGKLSYKYRLPVQSHLSENLDEIAVVKS---LH 244 (439)
T ss_dssp TTSCCCHHHHHHHHHHHHHHHTTTCSSEEECBEECCGGGCCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHH---HC
T ss_pred cccchhHHHHHHHHHHHHHHHhCCCCceEEEEecCCcCcCCHHHHHHHHHHHHhcCCcEEEeecCChHHHHHHHH---Hh
Confidence 001111234445555532 244567887777766678999999999999999999999984 4444433322 11
Q ss_pred CCCCcccccccCCHHHHHHHHHHHHHHHHhcC-CCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCC
Q 014320 252 GITGPEGHALSRPPLLEGEATTRAIRLAEFVN-TPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSD 330 (427)
Q Consensus 252 G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g-~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~ 330 (427)
|. +|... . .+......+ .+..+.|+..... +.++.+++.|+.+ .+||++.+..
T Consensus 245 ~~---------~~~~~-----~-~~~~~g~~~~~~~~i~H~~~~~~-~~~~~l~~~g~~~--~~~p~~~~~l-------- 298 (439)
T 2i9u_A 245 KK---------SNFYG-----E-VYDKFGLFGNTPTLMAHCIHSSK-EEINLIKRNNVTI--VHCPTSNFNL-------- 298 (439)
T ss_dssp TT---------CSSHH-----H-HHHHTTCSSSSCEEEEECCSCCH-HHHHHHHHTTCEE--EECHHHHHHT--------
T ss_pred CC---------CCCHH-----H-HHHHcCCCCCCCeEEEEEecCCH-HHHHHHHHcCCEE--EECccchhhc--------
Confidence 21 11111 1 111112223 4566888776543 5677788888654 4588643210
Q ss_pred cccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHH-----
Q 014320 331 FVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV----- 405 (427)
Q Consensus 331 ~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~----- 405 (427)
+. ..|| +++++++|+++++|||+.+.. ..+ ++ .+.++...+.+..
T Consensus 299 ---~~---~~~~---------~~~~~~~Gv~~~lgtD~~~~~-~~~------~~--------~~~~~~~~~~~~~~~~~~ 348 (439)
T 2i9u_A 299 ---GS---GMMP---------VRKYLNLGINVVLGSDISAGH-TCS------LF--------KVIAYAIQNSKIKWQESG 348 (439)
T ss_dssp ---TC---CCCC---------HHHHHHTTCEEEECCCBTTBC-CSC------HH--------HHHHHHHHHHHHHHHHTT
T ss_pred ---cc---ccCC---------HHHHHHCCCcEEEecCCCCCC-CcC------HH--------HHHHHHHHHhcccccccc
Confidence 01 1344 456889999999999996522 111 11 1334444333322
Q ss_pred -hcCCCCHHHHHHHHchhhhcC
Q 014320 406 -ESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 406 -~~~~l~l~~~v~~~t~npA~~ 426 (427)
...++|++++++++|.|||++
T Consensus 349 ~~~~~ls~~~al~~~T~~~A~~ 370 (439)
T 2i9u_A 349 KKDMFLSTSEAFYMATKKGGSF 370 (439)
T ss_dssp SCSCCCCHHHHHHHHTHHHHTT
T ss_pred CCCCCCCHHHHHHHHHHHHHHH
Confidence 246899999999999999985
No 30
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=99.96 E-value=4.1e-29 Score=247.34 Aligned_cols=307 Identities=15% Similarity=0.147 Sum_probs=192.0
Q ss_pred CccEEEECcEEEcCCC---ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCC-----CCC
Q 014320 52 SSKILIKGGTVVNAHH---QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG-----SET 123 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~---~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g-----~~~ 123 (427)
|.+++|+|++|+++.+ .++++|+|+||||++|++....+++.++||++|++|+|||||+|+|+...... ..+
T Consensus 3 m~~~~i~n~~i~~~~~~~~~~~~~i~i~~g~I~~i~~~~~~~~~~~~iD~~g~~v~PGliD~H~H~~~~~~~~~~~~~~~ 82 (426)
T 2r8c_A 3 LTTFLFRNGALLDPDHPDLLQGFEILIEDGFIREVSDKPIKSSNAHVIDVKGKTIMPGLIDLHVHVVAIEFNLPRVATLP 82 (426)
T ss_dssp -CEEEEEEEEECCTTSSSCEEEEEEEEESSBEEEEESSCCCCSSCEEEECTTCEEEECEEEEEECTTCCSSCHHHHHHSC
T ss_pred cccEEEEeeEEEeCCCCcccCCceEEEECCEEEEEcCCCCCCCCCeEEECCCCEEcCCeEeeeeccccccCCchhhccCC
Confidence 4578999999999864 35789999999999999864445678999999999999999999999876211 011
Q ss_pred hhhHH----HHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceece--------------------------
Q 014320 124 IDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGF-------------------------- 173 (427)
Q Consensus 124 ~e~~~----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------- 173 (427)
.+... ...+.++++||||++|++.... ...+.++.....+++.......
T Consensus 83 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~-~l~~~i~~~~~~gpri~~~g~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 161 (426)
T 2r8c_A 83 NVLVTLRAVPIMRAMLRRGFTTVRDAGGAGY-PFKQAVESGLVEGPRLFVSGRALSQTGGHADPRARSDYMPPDSPCGCC 161 (426)
T ss_dssp HHHHHHHHHHHHHHHHHTTEEEEEECSSCCH-HHHHHHHTTSSCCCEEEECCSEEECTTSTTCCCCCSSBCCCSCSSSSB
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeCCCchH-HHHHHHHcCCCCCCeEEecCCcccCCCCCccccccccccccccccccc
Confidence 22221 2345679999999999864321 2222222211112221110000
Q ss_pred -----eccccCCChhhHHHHHHHHHHcCCCeEEEEEe--------cCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhh
Q 014320 174 -----HMAITKWDEVVSDEMEVMVKEKGINSFKFFMA--------YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDA 240 (427)
Q Consensus 174 -----~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~--------~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~ 240 (427)
+.......++..+.++++. +.|++.+|++.+ +++.+.+++++++++++.|+++|+++++|+.+.+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~v~~~~-~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~ 240 (426)
T 2r8c_A 162 VRVGALGRVADGVDEVRRAVREEL-QMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGRGTYVLAHAYTPAA 240 (426)
T ss_dssp CCTTCCEEECCSHHHHHHHHHHHH-HHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHTTCCEEEEECSHHH
T ss_pred ccccccccccCCHHHHHHHHHHHH-HcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHcCCEEEEEeCChHH
Confidence 0011122344556667666 689999999986 33455789999999999999999999999986654
Q ss_pred HHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCcccee
Q 014320 241 VFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLV 320 (427)
Q Consensus 241 ~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~ 320 (427)
+... + +.|.. .+.|+...+. +.++++++.|+.+++...+...+
T Consensus 241 i~~a-------------------------------l----~~G~~-~i~H~~~~~~-~~~~~~~~~gv~~~pt~~~~~~~ 283 (426)
T 2r8c_A 241 IARA-------------------------------V----RCGVR-TIEHGNLIDD-ETARLVAEHGAYVVPTLVTYDAL 283 (426)
T ss_dssp HHHH-------------------------------H----HTTCS-EEEECTTCCH-HHHHHHHHTTCEEECCTHHHHHH
T ss_pred HHHH-------------------------------H----HcCCC-EEecCCcCCH-HHHHHHHHcCCeEeechHHHHHH
Confidence 4221 1 12333 4888877654 77888999998776543333222
Q ss_pred eCcccccCCCcccCceeEEcCCCCC--cccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHH
Q 014320 321 LDDSWLWHSDFVTAAKYVMSPPIRA--SGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMH 398 (427)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~pplr~--~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~ 398 (427)
+...... .+. .. .+..++. ......++++++.|+.+++|||+.+... .. ...+
T Consensus 284 ~~~~~~~--~~~--p~--~~~~~~~~~~~~~~~~~~~~~~Gv~v~lgTD~~~~~~-~~--------------~~~e---- 338 (426)
T 2r8c_A 284 ASEGEKY--GLP--PE--SIAKIADVHGAGLHSIEIMKRAGVKMGFGTDLLGEAQ-RL--------------QSDE---- 338 (426)
T ss_dssp HHHTTTT--TCC--HH--HHTTSTTTGGGHHHHHHHHHHTTCEECCCCCCCGGGG-GG--------------TTHH----
T ss_pred hhhcccc--CCC--HH--HHHHHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCC-cc--------------hHHH----
Confidence 1111000 000 00 0001111 1235668889999999999999742211 10 0011
Q ss_pred HHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 399 LVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 399 ~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+ ....+. +|+.++++++|.|||++
T Consensus 339 --~-~~~~~~-l~~~eal~~aT~~~A~~ 362 (426)
T 2r8c_A 339 --F-RILAEV-LSPAEVIASATIVSAEV 362 (426)
T ss_dssp --H-HHHTTT-SCHHHHHHHTTHHHHHH
T ss_pred --H-HHHHhc-CCHHHHHHHHHHHHHHH
Confidence 1 112333 99999999999999974
No 31
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=99.96 E-value=2.1e-29 Score=249.04 Aligned_cols=303 Identities=17% Similarity=0.123 Sum_probs=189.0
Q ss_pred CccEEEECcEEEcCCC---ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCC-----CCC
Q 014320 52 SSKILIKGGTVVNAHH---QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG-----SET 123 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~---~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g-----~~~ 123 (427)
|.+++|+|++|+++++ ..+++|+|+||||++|++....+.+.++||++|++|+|||||+|+|+...... ..+
T Consensus 3 ~~~~~i~n~~v~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~ 82 (423)
T 3feq_A 3 LTITVLQGGNVLDLERGVLLEHHHVVIDGERIVEVTDRPVDLPNAQAIDVRGKTVMPGFIDCHVHVLASNANLGVNATQP 82 (423)
T ss_dssp -CEEEEEEEEEEETTTTEEEEEEEEEEETTEEEEEECSCCCCSSCEEEECTTCEEEECEEEEEECTTCCSSCHHHHHHSC
T ss_pred ceEEEEEccEEEeCCCCcccCCceEEEECCEEEEecCCCCCCCCCeEEeCCCCEECCCeeeeEeeecccCCChhhhhcCC
Confidence 5678999999999875 34789999999999999865555678999999999999999999999876210 011
Q ss_pred hhhH----HHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceece--------------------------
Q 014320 124 IDDF----FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGF-------------------------- 173 (427)
Q Consensus 124 ~e~~----~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------- 173 (427)
.+.. ....+.++++||||++|++.... ...+.++.....+++.......
T Consensus 83 ~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~-~l~~~~~~~~~~g~r~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 161 (423)
T 3feq_A 83 NILAAIRSLPILDAMLSRGFTSVRDAGGADW-SLMQAVETGLVSGPRIFPSGKALSQTGGHGDFRPRGDLLEPCSCCFRT 161 (423)
T ss_dssp HHHHHHTHHHHHHHHHHTTEEEEEECSSCCH-HHHHHHHTTSSCSCEEECCCSEEECTTSTTCCCCC---CCCCCSSCCT
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeCCCchH-HHHHHHHcCCCCCCeEEecCcccccCCCCccccccccccccccccccc
Confidence 1111 13345679999999999864321 2222222211112221111000
Q ss_pred --eccccCCChhhHHHHHHHHHHcCCCeEEEEEe--------cCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHH
Q 014320 174 --HMAITKWDEVVSDEMEVMVKEKGINSFKFFMA--------YKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFE 243 (427)
Q Consensus 174 --~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~--------~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~ 243 (427)
+.......++..+.++++. +.|++.+|++.+ +++...+++++++++++.|+++|+++++|+.+...+..
T Consensus 162 ~~~~~~~~~~~~~~~~v~~~~-~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~i~~ 240 (423)
T 3feq_A 162 GAIARVVDGVEGVRLAVREEI-QKGATQIKIMASGGVASPTDPIANTQYSEDEIRAIVDEAEAANTYVMAHAYTGRAIAR 240 (423)
T ss_dssp TCSEEECCSHHHHHHHHHHHH-HTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCCEEEEEEEHHHHHH
T ss_pred cccceecCCHHHHHHHHHHHH-HcCCCEEEEeccCCcCCCCCCcccccCCHHHHHHHHHHHHHCCCeEEEEeCChHHHHH
Confidence 0011122244455666666 689999999986 34556789999999999999999999999976544322
Q ss_pred HHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCc
Q 014320 244 GQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDD 323 (427)
Q Consensus 244 ~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~ 323 (427)
. ++ .|.. .+.|+...+. +.++++++.|+.+++...+...++..
T Consensus 241 ~-------------------------------l~----~g~~-~i~H~~~~~~-~~~~~l~~~gv~~~pt~~~~~~~~~~ 283 (423)
T 3feq_A 241 A-------------------------------VR----CGVR-TIEHGNLVDE-AAAKLMHEHGAFVVPTLVTYDALAKH 283 (423)
T ss_dssp H-------------------------------HH----HTCC-EEEEEEECCH-HHHHHHHHHTCEEECCTHHHHHHHHH
T ss_pred H-------------------------------HH----cCCC-EEeccCcCCH-HHHHHHHHCCCccccchHHHHHHHhc
Confidence 2 11 2332 4677665443 66788888898775533232221111
Q ss_pred ccccCCCcccCceeEEcCCCCCc------ccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhH
Q 014320 324 SWLWHSDFVTAAKYVMSPPIRAS------GHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERM 397 (427)
Q Consensus 324 ~~~~~~~~~~~~~~~~~pplr~~------~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l 397 (427)
.. .....|..+.+ .....++.+++.|+.+++|||+.+. .... ...+..
T Consensus 284 ~~----------~~~~~p~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~gTD~~~~-~~~~--------------~~~e~~- 337 (423)
T 3feq_A 284 GA----------EFGMPPESVAKVASVQQKGRESLEIYANAGVKMGFGSDLLGE-MHAF--------------QSGEFR- 337 (423)
T ss_dssp TG----------GGTCCTTTSSTHHHHHHHHHHHHHHHHHHTCCBCCCCCCCGG-GGGG--------------TTHHHH-
T ss_pred cc----------ccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC-CCcc--------------hHHHHH-
Confidence 10 00011211111 1345578889999999999997421 1100 001211
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 398 HLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 398 ~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
...+. +|+.++++++|.|||++
T Consensus 338 ------~~~~~-ls~~eal~~aT~~~A~~ 359 (423)
T 3feq_A 338 ------IRAEV-LGNLEALRSATTVAAEI 359 (423)
T ss_dssp ------HHHTT-SCHHHHHHTTTHHHHHH
T ss_pred ------HHHhh-CCHHHHHHHHHHHHHHH
Confidence 12334 99999999999999974
No 32
>1e9y_B Urease subunit beta; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.92.1.1 c.1.9.2 PDB: 1e9z_B* 3qga_C* 3qgk_C*
Probab=99.96 E-value=9.6e-29 Score=250.96 Aligned_cols=311 Identities=15% Similarity=0.147 Sum_probs=198.4
Q ss_pred CccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCC------------CCCceEEeCCCCEEeccccccccccccCcC
Q 014320 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV------------GDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~------------~~~~~viD~~g~~v~PG~ID~H~H~~~~~~ 119 (427)
..+++|+|++|+++.+..+++|+|+||||++||+.... .++.++||++|++|+|||||+|+|+..+
T Consensus 65 ~~dllI~n~~Vid~~gi~~~dI~I~dGrI~~IG~~~~~~~~~~~~~~~~~~~~~evIDa~G~iV~PGlID~HvHl~~p-- 142 (569)
T 1e9y_B 65 ELDLIITNALIVDYTGIYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTHIHFISP-- 142 (569)
T ss_dssp CCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTSSSCCGGGBCCTTCEEEECTTCEEEECEEEEEEETTCT--
T ss_pred cCCEEEEeeEEECCCCcEeeeEEEECCEEEEeecCCCccccccccccccCCCCCeEEECCCCEEecCEEEEeecCCCc--
Confidence 45799999999997666678999999999999975321 2356899999999999999999998765
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCC------C--cHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPIN------G--SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM 191 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 191 (427)
+ ..++++++||||++|++..+. . .....++...+......+++++.+... ....++++++
T Consensus 143 ~---------~~~~al~~GvTTv~d~g~~p~~~t~~~~~~~g~~~l~~~~~a~~~~~~~~~~~g~g~---~~~~~~l~e~ 210 (569)
T 1e9y_B 143 Q---------QIPTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWMLRAAEEYSMNLGFLAKGN---ASNDASLADQ 210 (569)
T ss_dssp T---------HHHHHHHTTEEEEEEECCSSCHHHHHCCCCCHHHHHHHHHHHHTTSSSEEEEEEECC---CSCHHHHHHH
T ss_pred H---------HHHHHHhCCeeEEEcCCcCCCCCCcCcccCCcHHHHHHHHHHhcccCceEEEECCCC---cCCHHHHHHH
Confidence 2 157899999999999853211 0 123445555555555556665543211 1234567777
Q ss_pred HHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHH
Q 014320 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (427)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a 271 (427)
+ +.|+.++|++..+ ..+++.++++++.|+++|+++++|+++..+. |.
T Consensus 211 ~-~~Ga~gik~~~~~----~~t~e~l~~~l~~A~~~g~~V~iHa~~~~e~----------g~------------------ 257 (569)
T 1e9y_B 211 I-EAGAIGFKIHEDW----GTTPSAINHALDVADKYDVQVAIHTDTLNEA----------GC------------------ 257 (569)
T ss_dssp H-HTTCSEEEECGGG----CCCHHHHHHHHHHHHHTTCEEEECCCTTCSS----------CC------------------
T ss_pred H-HcCCCEEEecCCC----CCCHHHHHHHHHHHHHhCCEEEEEcCCcccc----------hH------------------
Confidence 7 6888899887643 3689999999999999999999999753211 00
Q ss_pred HHHHHHHHHhcCCCEEEEcCCCHHH---HHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccC-ceeEEcCCC----
Q 014320 272 TTRAIRLAEFVNTPLYVVHVMSMDA---MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTA-AKYVMSPPI---- 343 (427)
Q Consensus 272 ~~~~~~~~~~~g~~~~i~H~~~~~~---~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~-~~~~~~ppl---- 343 (427)
+.+. ++...|.++|++|++.... .+.++.+++.|+ .+..+++++.++.+...+ .++.- ......+++
T Consensus 258 ~~~~--la~~~g~~~hi~H~~~~~~~~~~d~I~~~~~~gv--~~~~~~ptl~~t~~~~~~-~~d~~~v~h~l~~~~~ed~ 332 (569)
T 1e9y_B 258 VEDT--MAAIAGRTMHTFHTEGAGGGHAPDIIKVAGEHNI--LPASTNPTIPFTVNTEAE-HMDMLMVCHHKDKSIKEDV 332 (569)
T ss_dssp HHHH--HHHHTTCCEEETTTTSTTSCSTTTGGGGGGSTTE--EEEECGGGCSCBTTHHHH-HHHHHHHTTTCCSSCHHHH
T ss_pred HHHH--HHHHcCCCEEEEEcccCcccccHHHHHHHHHcCC--eeEeeCCccccccchhhh-hhchhhhhhhcCcccHHHH
Confidence 0111 1234678999999987642 478888888885 333344444333221100 00000 000112222
Q ss_pred -----CCcccHHHHHHHHh-cCCceEEecCCCCCChhh-hhcCCCCCcc------CCCCCchhhHhHHHHHHHHHhcCCC
Q 014320 344 -----RASGHNKALQAALA-TGILQLVGTDHCAFNSTQ-KAFGIDDFRK------IPNGVNGIEERMHLVWDTMVESGQI 410 (427)
Q Consensus 344 -----r~~~~~~~l~~~l~-~G~~~~lgSD~~p~~~~~-~~~~~~~~~~------~~~G~~~~e~~l~~~~~~~~~~~~l 410 (427)
|.+.++.++|+.+. .|+++++||||.|++... ... +.|. ...|..+.+ ...+.++
T Consensus 333 ~~~~~rlr~~~~a~~~~L~d~Gv~v~iGSD~~~~~~~g~~~~---~~~~~~~~~~~~~G~l~~~---------~~~~~~l 400 (569)
T 1e9y_B 333 QFADSRIRPQTIAAEDTLHDMGAFSITSSDSQAMGRVGEVIT---RTWQTADKNKKEFGRLKEE---------KGDNDNF 400 (569)
T ss_dssp HHHHHHCCHHHHHHHHHHHHTTSCCEECCCTTSSCCTTSHHH---HHHHHHHHHHHHHCSCSSC---------CSSSCHH
T ss_pred HHhhcchhhhHHHHHHHHHhCCCEEEEeCCCCccCccccccc---chhhHHHHhHhhccCcchh---------hccccCC
Confidence 12245778888887 699999999998865310 000 0000 000000000 0124568
Q ss_pred CHHHHHHHHchhhhcC
Q 014320 411 SVTDYVRLTSTEWGRL 426 (427)
Q Consensus 411 ~l~~~v~~~t~npA~~ 426 (427)
++.++++++|.|||++
T Consensus 401 s~~~al~~~T~npA~~ 416 (569)
T 1e9y_B 401 RIKRYLSKYTINPAIA 416 (569)
T ss_dssp HHHHHHGGGTHHHHHH
T ss_pred CHHHHHHHHhHHHHHH
Confidence 9999999999999974
No 33
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=99.96 E-value=3e-28 Score=244.47 Aligned_cols=323 Identities=15% Similarity=0.073 Sum_probs=193.3
Q ss_pred ccEEEECcEEEcCCC---------------ceeeeEEEeCCeEEEeeCCCCCC---CCceEEeCCCCEEecccccccccc
Q 014320 53 SKILIKGGTVVNAHH---------------QQIADVYVEDGIVVAVQPNINVG---DDVKVLDATGKFVMPGGIDPHTHL 114 (427)
Q Consensus 53 ~~~~i~~~~i~~~~~---------------~~~~~i~i~~g~I~~vg~~~~~~---~~~~viD~~g~~v~PG~ID~H~H~ 114 (427)
..++|.+++|+++.+ ..+++|+|+||||++||+..+.+ ++.++||++|++|+|||||+|+|+
T Consensus 3 ~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~V~I~~G~I~~Vg~~~~~~~~~~~~~viD~~G~~v~PG~ID~H~Hl 82 (475)
T 2ood_A 3 LTTVGIRGTFFDFVDDPWKHIGNEQAAARFHQDGLMVVTDGVIKAFGPYEKIAAAHPGVEITHIKDRIIVPGFIDGHIHL 82 (475)
T ss_dssp CCEEEEEEEEEEESSCGGGSTTCGGGGEEEEEEEEEEEESSBEEEEEEHHHHHHHSTTCEEEEEEEEEEEECEEEEEEEG
T ss_pred ccceEEEEEEEecCCccccccccCCCcceEEECCEEEEECCEEEEEeChhhhccccCCCeEEeCCCcEEecceecCcccH
Confidence 446788999998644 25789999999999999753211 346899999999999999999998
Q ss_pred ccCcC----CCC-----------------ChhhH----HHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccc
Q 014320 115 AMEFM----GSE-----------------TIDDF----FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCM 169 (427)
Q Consensus 115 ~~~~~----g~~-----------------~~e~~----~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (427)
.+... +.. +++++ ....+.++++||||++|+...........++..++.+.+..+
T Consensus 83 ~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~g~r~~~ 162 (475)
T 2ood_A 83 PQTRVLGAYGEQLLPWLQKSIYPEEIKYKDRNYAREGVKRFLDALLAAGTTTCQAFTSSSPVATEELFEEASRRNMRVIA 162 (475)
T ss_dssp GGTTCTTCCSCCHHHHHHHHTHHHHGGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred HhHhhcCCCCCCHHHHHHHhccchhhccCCHHHHHHHHHHHHHHHHhcCceEEEEecccCchhHHHHHHHHHHcCCeEEE
Confidence 65421 110 23333 334677899999999997532111122333444444444321
Q ss_pred eeceec---c--ccCCChhhHHHHHHHHHH-cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc-CCcEEEecC-ChhhH
Q 014320 170 DYGFHM---A--ITKWDEVVSDEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHAE-NGDAV 241 (427)
Q Consensus 170 ~~~~~~---~--~~~~~~~~~~~~~~l~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~e-~~~~~ 241 (427)
...... + .....++.++++.++.+. .+...+++++++++.+.++++.++++++.|+++ |+++++|+. +..++
T Consensus 163 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~g~~v~~H~~e~~~~~ 242 (475)
T 2ood_A 163 GLTGIDRNAPAEFIDTPENFYRDSKRLIAQYHDKGRNLYAITPRFAFGASPELLKACQRLKHEHPDCWVNTHISENPAEC 242 (475)
T ss_dssp CCEECCSSSCTTTCCCHHHHHHHHHHHHHHHTTBTTEEEEEEECBGGGCCHHHHHHHHHHHHHCTTSEEEEECSCCHHHH
T ss_pred EeeecccCCCcccccCHHHHHHHHHHHHHHhccCCceEEEEeccccCcCCHHHHHHHHHHHHhCCCCcEEEeeCCChHHH
Confidence 111111 0 011122344555555542 345568888888888889999999999999999 999999984 55444
Q ss_pred HHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceee
Q 014320 242 FEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVL 321 (427)
Q Consensus 242 ~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~ 321 (427)
....+ ..|.. +. ....++.....+.+..+.|+..... +.++++++.|+.+. .||++...
T Consensus 243 ~~~~~---~~g~~--------~~-------~~~~~~~~g~~~~~~~i~H~~~~~~-~~i~~~~~~g~~~~--~~P~~~~~ 301 (475)
T 2ood_A 243 SGVLV---EHPDC--------QD-------YLGVYEKFDLVGPKFSGGHGVYLSN-NEFRRMSKKGAAVV--FCPCSNLF 301 (475)
T ss_dssp HHHHH---HCTTC--------SS-------HHHHHHTTTCCSTTEEEECCTTCCH-HHHHHHHHHTCEEE--ECHHHHHH
T ss_pred HHHHH---HcCCC--------cc-------HHHHHHHcCCCCCCcEEEEeecCCH-HHHHHHHHcCCEEE--EChhhhhh
Confidence 43322 11210 00 0011111122456777889877654 66888888886544 58864321
Q ss_pred CcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCc--eEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHH
Q 014320 322 DDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGIL--QLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHL 399 (427)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~--~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~ 399 (427)
+ +. ..+| ++++++.|++ +++||||.++....- +.....++ ..+..++.
T Consensus 302 ----l-------~~---~~~~---------~~~~~~~Gv~~~~~lgTD~~~~~~~~~------~~~~~~~~-~~~~~~~~ 351 (475)
T 2ood_A 302 ----L-------GS---GLFR---------LGRATDPEHRVKMSFGTDVGGGNRFSM------ISVLDDAY-KVGMCNNT 351 (475)
T ss_dssp ----T-------TC---CCCC---------HHHHTCTTSCCEEEECCCBTTBSCCCH------HHHHHHHH-HHHHHHHH
T ss_pred ----c-------cc---CcCC---------HHHHHhCCCCCcEEEEccCCCCCCcCH------HHHHHHHH-HHhcccch
Confidence 1 01 1344 4679999999 999999976332110 00000000 00100111
Q ss_pred HHH----------HHHhcCCCCHHHHHHHHchhhhcC
Q 014320 400 VWD----------TMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 400 ~~~----------~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
++. ....+.+++++++++++|.|||++
T Consensus 352 ~~~~~~~p~~~~~~~~~~~~ls~~~al~~~T~~~A~~ 388 (475)
T 2ood_A 352 LLDGSIDPSRKDLAEAERNKLSPYRGFWSVTLGGAEG 388 (475)
T ss_dssp HSSSSSCGGGCCHHHHHHTCCCHHHHHHHTTHHHHHH
T ss_pred hccCCcccccccccccccCCCCHHHHHHHHHHHHHHH
Confidence 110 001126899999999999999974
No 34
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=99.96 E-value=1.7e-27 Score=234.35 Aligned_cols=303 Identities=17% Similarity=0.130 Sum_probs=184.6
Q ss_pred CCCccEEEECcEEEcCCC--ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCC------
Q 014320 50 QSSSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS------ 121 (427)
Q Consensus 50 ~~~~~~~i~~~~i~~~~~--~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~------ 121 (427)
.|+.+++|+|++|+++++ ...++|+|+||||++|++. .+.+.++||++|++|+|||||+|+|+. .....
T Consensus 3 ~~~~~~~i~n~~v~~~~~~~~~~~~v~I~~g~I~~ig~~--~~~~~~viD~~g~~v~PGlID~H~H~~-~~~~~~~~~~~ 79 (408)
T 3be7_A 3 LTSEDFLIKSKGYLDIQTGEIIKADLLIRNGKIAEIGKI--NTKDATVISIPDLILIPGLMDSHVHIV-GNDSKGEESIA 79 (408)
T ss_dssp --CCCEEEEEEEEECTTTCCEECCEEEEETTEEEEEECC--CCSSSEEEEEEEEEEEECEEEEEECCS-SCCCCSGGGTT
T ss_pred cccceEEEEeeEEEeCCCCceeeeEEEEECCEEEEEeCC--CCCCCeEEECCCCEECcCceeeeEccc-CCCCcchhhhc
Confidence 345689999999999775 3348999999999999986 234568999999999999999999997 31100
Q ss_pred CChhhHH----HHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhc----ccc-----c-eeceeccccCC-------
Q 014320 122 ETIDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK----NSC-----M-DYGFHMAITKW------- 180 (427)
Q Consensus 122 ~~~e~~~----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~----~~~-----~-~~~~~~~~~~~------- 180 (427)
.+++... ..++.++++||||++|+..... ....++...+.+. +.. + ..+.+......
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~--~~~~~~~~~~~~~~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~ 157 (408)
T 3be7_A 80 DSSHMGTVWGVVNAEKTLMAGFTTVRNVGAANY--ADVSVRDAIERGVINGPTMLVSGPALGITGGHCDHNLLPPEFNYS 157 (408)
T ss_dssp CCTHHHHHHHHHHHHHHHTTTEEEEEECCCSTT--HHHHHHHHHHTTSSCCCEEEECCSCBBCTTSTTSCCCSCTTTCCC
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCEEEeCCCccc--cCHHHHHHHHCCCCCCCEEEEccceeeccCCCCcccccccccccc
Confidence 1222221 2467789999999999864321 2223444333332 110 0 01111100000
Q ss_pred ---ChhhHHHHHHHHH---HcCCCeEEEEEecC--------CCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHH
Q 014320 181 ---DEVVSDEMEVMVK---EKGINSFKFFMAYK--------GSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQK 246 (427)
Q Consensus 181 ---~~~~~~~~~~l~~---~~g~~~ik~~~~~~--------~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~ 246 (427)
.....++++++++ ..|.+.+|++.+.. +.+.+++++++++++.|+++|+++.+|+.+...+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~i~~~-- 235 (408)
T 3be7_A 158 SEGVVDSPWEARKMVRKNRKYGADLIKFCATGGVMSRNTDVNAKQFTLEEMKAIVDEAHNHGMKVAAHAHGLIGIKAA-- 235 (408)
T ss_dssp CTTBCCSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHH--
T ss_pred CCcccCCHHHHHHHHHHHHhcCCCEEEEEecCCcCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH--
Confidence 0112233333321 46888999986431 2456789999999999999999999999775443211
Q ss_pred HHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccc
Q 014320 247 RMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWL 326 (427)
Q Consensus 247 ~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~ 326 (427)
+ +.|+. .+.|+..... +.++++++.|+.++++..+.. .+
T Consensus 236 -----------------------------~----~~g~~-~i~H~~~~~~-~~i~~~~~~g~~v~~~~~~~~------~~ 274 (408)
T 3be7_A 236 -----------------------------I----KAGVD-SVEHASFIDD-ETIDMAIKNNTVLSMDIFVSD------YI 274 (408)
T ss_dssp -----------------------------H----HHTCS-EEEECTTCCH-HHHHHHHHTTCEEECCCSTHH------HH
T ss_pred -----------------------------H----HcCCC-EEEECCCCCH-HHHHHHHHCCCEEeeeecHHH------Hh
Confidence 1 12333 4888877653 778889999976643221110 00
Q ss_pred cCCCcccCceeEEcCCCCCc------ccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHH
Q 014320 327 WHSDFVTAAKYVMSPPIRAS------GHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLV 400 (427)
Q Consensus 327 ~~~~~~~~~~~~~~pplr~~------~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~ 400 (427)
.... ....+.|+++.+ .++..+++++++|+.+++|||+.+ .+ .|....+..+
T Consensus 275 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~gTD~~~-~p--------------~~~~~~~~~~--- 332 (408)
T 3be7_A 275 LGEG----AKAGIREESLNKERLVGKKQRENFMNAHRRGAIITFGTDAGI-FD--------------HGDNAKQFAY--- 332 (408)
T ss_dssp HTTT----TTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTCCEECCCCBTT-BC--------------TTCGGGHHHH---
T ss_pred hhhc----cccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC-CC--------------CchHHHHHHH---
Confidence 0000 000112222211 124678899999999999999843 11 1222223221
Q ss_pred HHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 401 WDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 401 ~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+++. ++|++++++++|.|||++
T Consensus 333 ---~~~~-gls~~~al~~~T~n~A~~ 354 (408)
T 3be7_A 333 ---MVEW-GMTPLEAIQASTIKTATL 354 (408)
T ss_dssp ---HHHT-TCCHHHHHHTTTHHHHHH
T ss_pred ---HHHc-CCCHHHHHHHHHHHHHHH
Confidence 2333 799999999999999974
No 35
>1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A
Probab=99.95 E-value=2.3e-28 Score=242.33 Aligned_cols=315 Identities=16% Similarity=0.095 Sum_probs=184.7
Q ss_pred CccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCC-CCceEEeCCCCEEeccccccccccccCcC-CC--------
Q 014320 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVG-DDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS-------- 121 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~-~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g~-------- 121 (427)
+.+++|+|++|++++ ..++|+|+||||++||+..+.+ ++.++||++|++|+|||||+|+|+..... +.
T Consensus 7 ~~~~li~n~~v~~~~--~~~~v~I~~g~I~~vg~~~~~~~~~~~viD~~G~~v~PGlID~H~Hl~~~~~~~~~~~~~~~~ 84 (430)
T 1ra0_A 7 NALQTIINARLPGEE--GLWQIHLQDGKISAIDAQSGVMPITENSLDAEQGLVIPPFVEPHIHLDTTQTAGQPNWNQSGT 84 (430)
T ss_dssp -CCCEEEEEBCTTCC--SEEEEEEETTEEEEEEEESSCCCCCTTEEECTTCEEESCEEEEEECTTTTTCTTSSSCCSSCC
T ss_pred CCcEEEEeeEecCCC--ceeEEEEECCEEEEeecCCCCCCCCcceEccCCCEecccccccccchhhhhhcCCCcCCCCCC
Confidence 457899999999976 6789999999999999765432 45689999999999999999999976421 10
Q ss_pred --------------CChhhHHHHH----HHHHcCCceEEecCcCCCCCcHHHHHHHHHHHh--ccccceeceec-cc--c
Q 014320 122 --------------ETIDDFFSGQ----AAALAGGTTMHIDFVIPINGSLTAGFEAYEKKA--KNSCMDYGFHM-AI--T 178 (427)
Q Consensus 122 --------------~~~e~~~~~~----~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~--~ 178 (427)
.++++++..+ +.++++||||++|+....... ...++...+.. .+..+++.+.. .. .
T Consensus 85 ~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (430)
T 1ra0_A 85 LFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDAT-LTALKAMLEVKQEVAPWIDLQIVAFPQEGI 163 (430)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTEEEEEEEEECCSTT-CHHHHHHHHHHHHHTTTCEEEEEEECTTCS
T ss_pred HHHHHHHhHHhhhhcCHHHHHHHHHHHHHHHHhcCccEEeeccccCChH-HHHHHHHHHHHHhhhhhEEEEEEecCCccc
Confidence 1335554443 445799999999986431111 11222222211 13334433221 10 0
Q ss_pred CCChhhHHHHHHHHHHcCCCeEEEEEecCCCcc--CCHHHHHHHHHHHHHcCCcEEEecC-ChhhHHHHHHHHHHcCCCC
Q 014320 179 KWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFM--INDELLIEGFKRCKSLGALAMVHAE-NGDAVFEGQKRMIELGITG 255 (427)
Q Consensus 179 ~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~--~~~~~l~~~~~~a~~~g~~v~~H~e-~~~~~~~~~~~l~~~G~~~ 255 (427)
...++..+.++++. +.|...+.. . ++.++. ++++.++++++.|+++|+++++|+. .........+
T Consensus 164 ~~~~~~~~~~~~~~-~~g~~~~~~-~-~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~--------- 231 (430)
T 1ra0_A 164 LSYPNGEALLEEAL-RLGADVVGA-I-PHFEFTREYGVESLHKTFALAQKYDRLIDVHCDEIDDEQSRFVE--------- 231 (430)
T ss_dssp SSSTTHHHHHHHHH-HTTCSEECC-C-GGGSSSHHHHHHHHHHHHHHHHHHTCEEEEEECCSSCTTCCHHH---------
T ss_pred ccCchHHHHHHHHH-HhCCCeEee-e-ecccccccccHHHHHHHHHHHHHcCCCEEEEECCCCchhHHHHH---------
Confidence 01223344466665 455544422 1 333333 6889999999999999999999984 4433211111
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHH------HHHHHHhhcCCCEEEecCccce-eeCcccccC
Q 014320 256 PEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAM------EEIAKARKAGQRVIGEPVVSGL-VLDDSWLWH 328 (427)
Q Consensus 256 ~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~------~~i~~~~~~G~~v~~~~~p~~l-~~~~~~~~~ 328 (427)
.+.+.+..... +.+.++.|+...... +.++++++.|+.+. +||+.. .+... .
T Consensus 232 ---------------~~~~~~~~~g~-~~~~~i~H~~~~~~~~~~~~~~~i~~~~~~gv~v~--~~p~~~~~~~~~-~-- 290 (430)
T 1ra0_A 232 ---------------TVAALAHHEGM-GARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFV--ANPLVNIHLQGR-F-- 290 (430)
T ss_dssp ---------------HHHHHHHHHTC-GGGEEEEECGGGGGSCHHHHHHHHHHHHHHTCEEE--ECHHHHHHHTTT-T--
T ss_pred ---------------HHHHHHHHhCC-CCCEEEEeccccccCChHhHHHHHHHHHHcCCEEE--ECchhhhhhccc-c--
Confidence 01111111111 456888898765432 47888999997655 577532 22110 0
Q ss_pred CCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcC
Q 014320 329 SDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESG 408 (427)
Q Consensus 329 ~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~ 408 (427)
...|+.+.... ++++++.|+++++||||.+...... ...-.-.+..++..+... ..
T Consensus 291 ---------~~~p~~~~~~~---~~~~~~~Gv~~~lgTD~~~~~~~~~----------~~~~~~~~~~~~~~~~~~--~~ 346 (430)
T 1ra0_A 291 ---------DTYPKRRGITR---VKEMLESGINVCFGHDGVFDPWYPL----------GTANMLQVLHMGLHVCQL--MG 346 (430)
T ss_dssp ---------CCSSCCCCCCC---HHHHHHTTCCEEECCBCSSBTTBSC----------CCCCHHHHHHHHHHHTTC--CS
T ss_pred ---------CCCCCcCCCCC---HHHHHHCCCEEEEeCCCCcccCCCC----------CCCCHHHHHHHHHHHHcc--CC
Confidence 01355544332 6778899999999999963111000 000011233333332111 12
Q ss_pred CCCHHHHHHHHchhhhcC
Q 014320 409 QISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 409 ~l~l~~~v~~~t~npA~~ 426 (427)
+++++++++++|.|||++
T Consensus 347 ~~~~~~al~~~T~~~A~~ 364 (430)
T 1ra0_A 347 YGQINDGLNLITHHSART 364 (430)
T ss_dssp HHHHHGGGGGGTHHHHHH
T ss_pred cccHHHHHHHHHHHHHHH
Confidence 369999999999999974
No 36
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17
Probab=99.95 E-value=1.6e-27 Score=238.16 Aligned_cols=311 Identities=17% Similarity=0.136 Sum_probs=186.4
Q ss_pred CccEEEECcEEEcCCC---ceeeeEEE-eCCeEEEeeC--CCCCCCCceEEeCCCCEEeccccccccccccCcCCCC---
Q 014320 52 SSKILIKGGTVVNAHH---QQIADVYV-EDGIVVAVQP--NINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSE--- 122 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~---~~~~~i~i-~~g~I~~vg~--~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~--- 122 (427)
..+++|+|++|++++. ..+++|+| +||||++||+ ....+.+.++||++|++|+|||||+|+|+..+.....
T Consensus 12 ~~~~li~n~~i~~~~~~~~~~~~~v~I~~~g~I~~Vg~~~~~~~~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~~~~~~ 91 (458)
T 2p9b_A 12 EPFALAHATIVTGDKAGTILRNMTIVVGADGRIEQVAPSIETSIPAEYHYLDGTGKIVMPGLINAHTHLFSQGKPLNPKL 91 (458)
T ss_dssp CCEEEEEEEEECCCTTCCEEEEEEEEECTTSBEEEEEEGGGCCCCTTCEEEECTTCEEEECEEEEEECSCC---------
T ss_pred CCcEEEEeeEEEeCCCCccccCcEEEEecCCEEEEEeccccCCCCCCCeEEECCCCEEccceeeeeeccccccccccccc
Confidence 3568999999999764 24689999 9999999997 4333345689999999999999999999987621100
Q ss_pred ------------Ch---------hhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceec-------ee
Q 014320 123 ------------TI---------DDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYG-------FH 174 (427)
Q Consensus 123 ------------~~---------e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 174 (427)
.. ..+...++.++++||||++|+..... ....++...+.+......+. ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~--~~~~~~~~~~~g~~~g~r~~~~g~~~~~~ 169 (458)
T 2p9b_A 92 ATPKGQRMVATFAHSPLGKPYMAATVKHNATTLLESGVTTIRTLGDVGY--EVVTLRDQIDAGQILGPRILASGPLMAIP 169 (458)
T ss_dssp --------------------CHHHHHHHHHHHHHHTTEEEEEESCCSSS--HHHHHHHHHHTTSSCCCEEECCCSCEECC
T ss_pred cchhhhhhhhhhhhhcccccHHHHHHHHHHHHHHHcCCcEEEeCCCCcc--ccHHHHHHHHcCCCCCCeEEecccccccC
Confidence 01 12344678889999999999854321 22334433333321001110 00
Q ss_pred cccc--------CCChhhHHHHHHHHHHcCCCeEEEEEec-----C-----CCccCCHHHHHHHHHHHHHcCCcEEEecC
Q 014320 175 MAIT--------KWDEVVSDEMEVMVKEKGINSFKFFMAY-----K-----GSFMINDELLIEGFKRCKSLGALAMVHAE 236 (427)
Q Consensus 175 ~~~~--------~~~~~~~~~~~~l~~~~g~~~ik~~~~~-----~-----~~~~~~~~~l~~~~~~a~~~g~~v~~H~e 236 (427)
+... ...++..+.++++. +.|.+.+|++.+. . +.+.++++.++++++.|+++|+++++|++
T Consensus 170 g~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~ik~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~ 248 (458)
T 2p9b_A 170 EGHGAPLIALTSGTPEEARTAVAQNL-KAGVNAIKIAATGGVTDAQEIGEAGSPQMSVEQMRAICDEAHQYGVIVGAHAQ 248 (458)
T ss_dssp CSSCCCCEECCSCCHHHHHHHHHHHH-HTTCSCEEEECSCCTTSCCCC------CCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCCccccCccCCCHHHHHHHHHHHH-HcCCCEEEEEecCCcCCCCccCCCCCCcCCHHHHHHHHHHHHHCCCeEEEEeC
Confidence 1000 11122233344444 5788899998752 1 23467899999999999999999999998
Q ss_pred ChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHh------hcCCCE
Q 014320 237 NGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKAR------KAGQRV 310 (427)
Q Consensus 237 ~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~------~~G~~v 310 (427)
+...+... + ..|.. .+.|+..... +.+++++ +.|+.+
T Consensus 249 ~~~~i~~~-------------------------------~----~~G~~-~i~H~~~~~~-~~~~~~~~~~~~~~~g~~v 291 (458)
T 2p9b_A 249 SPEGVRRS-------------------------------L----LAGVD-TIEHGSVLDD-ELIGMFRHNPNALRGYSAL 291 (458)
T ss_dssp SHHHHHHH-------------------------------H----HHTCS-EEEECCCCCH-HHHHHHHCCTTSTTSCCEE
T ss_pred CHHHHHHH-------------------------------H----HcCCC-EEEECCCCCH-HHHHHHhcccccccCCeEE
Confidence 76443221 1 12332 4778766543 5678888 889765
Q ss_pred EEecCccc--eeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCC
Q 014320 311 IGEPVVSG--LVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPN 388 (427)
Q Consensus 311 ~~~~~p~~--l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~ 388 (427)
.+...|.. +++..... ++. ......+|.+...+...+++++++|+++++|||+.+ .. .+.
T Consensus 292 ~p~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~gtD~~~-~~------------~~~ 353 (458)
T 2p9b_A 292 IPTLSAGLPLTLLGQDVT---GIT--DIQLENSKNVVGGMVSGARQAHEAGLMIGVGTDTGM-TF------------VPQ 353 (458)
T ss_dssp ECCHHHHHHHHHSCHHHH---CCC--HHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCCCTTS-TT------------SCT
T ss_pred EeecchhhHHHhhhcccc---cCC--HHHHHHHHHHHHHHHHHHHHHHHCCCeEEEecCCCC-CC------------Ccc
Confidence 43322211 11111000 000 000011233334456788999999999999999732 11 122
Q ss_pred CCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 389 GVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 389 G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
|....+.+ .+++..++|++++++++|.|||++
T Consensus 354 ~~~~~e~~------~~~~~~~ls~~~al~~~T~~~A~~ 385 (458)
T 2p9b_A 354 YATWRELE------LLVAYAGFSPAEALHAATAVNASI 385 (458)
T ss_dssp TCHHHHHH------HHHHHHCCCHHHHHHHHTHHHHHH
T ss_pred ccHHHHHH------HHHHhcCCCHHHHHHHHHHHHHHH
Confidence 22222322 233334799999999999999984
No 37
>2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16
Probab=99.95 E-value=1.2e-27 Score=236.45 Aligned_cols=316 Identities=16% Similarity=0.096 Sum_probs=180.9
Q ss_pred CccEEEECcEEEcCCC--ceeeeEEEeCCeEEEeeCCCCC---CCCceEEeCCCCEEeccccccccccccCcC-C-----
Q 014320 52 SSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINV---GDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G----- 120 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~--~~~~~i~i~~g~I~~vg~~~~~---~~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g----- 120 (427)
|.+++|+|++|++++. ..+++|+|+||||++||+..+. .++.++||++ ++|+|||||+|+|+..+.. +
T Consensus 36 ~~~~li~n~~v~~~~~~~~~~~~V~I~~g~I~~vg~~~~~~~~~~~~~viD~~-~~v~PGlID~H~H~~~~~~~g~~~~~ 114 (420)
T 2imr_A 36 HTPRLLTCDVLYTGMGGAQSPGGVVVVGETVAAAGHPDELRRQYPHAAEERAG-AVIAPPPVNAHTHLDMSAYEFQALPY 114 (420)
T ss_dssp CCEEEEEESEEECC---EESSEEEEEETTEEEEEECHHHHHHHCTTCEEEECC-SEESSCCCEEEEESSCCHHHHHHCHH
T ss_pred cccEEEECCEEEeCCCCeeeccEEEEECCEEEEecCcccccccCCCCeeecCC-eEECCCCEecCcCcchhhhhhccCCH
Confidence 4678999999999874 3578999999999999975321 1346899999 9999999999999876310 0
Q ss_pred --C-----------CChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHH-HHHHhccccceeceeccccCCChhhHH
Q 014320 121 --S-----------ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEA-YEKKAKNSCMDYGFHMAITKWDEVVSD 186 (427)
Q Consensus 121 --~-----------~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (427)
. .++.......+.++++||||++|+... .+.++. ..+.+.+..+.+.+.........+..+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~-----~~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~ 189 (420)
T 2imr_A 115 FQWIPEVVIRGRHLRGVAAAQAGADTLTRLGAGGVGDIVWA-----PEVMDALLAREDLSGTLYFEVLNPFPDKADEVFA 189 (420)
T ss_dssp HHTSHHHHHHHTTCCHHHHHHHHHHHHHHTTCCCEEEEECS-----HHHHHHHHTCTTCCEEEEEEECBCCGGGHHHHHH
T ss_pred HHHHHHhhhhhhhccCHHHHHHHHHHHHhcCcEEEEEccCC-----HHHHHHHHHhcCcEEEEEeeecCCCchhhHHHHH
Confidence 0 001222445677899999999998632 223332 222222322222221100000111223
Q ss_pred HHHHHHHH---cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcCCC--------
Q 014320 187 EMEVMVKE---KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGIT-------- 254 (427)
Q Consensus 187 ~~~~l~~~---~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~-------- 254 (427)
+..++++. .+...+|+++++++.+.++++.++++++.|+++|+++++|+ ++.+.+....+ ..|..
T Consensus 190 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~~~~~---~~g~~~~~~~~~~ 266 (420)
T 2imr_A 190 AARTHLERWRRLERPGLRLGLSPHTPFTVSHRLMRLLSDYAAGEGLPLQIHVAEHPTELEMFRT---GGGPLWDNRMPAL 266 (420)
T ss_dssp HHHHHHHHHHTTCBTTEEEEEEECCSSSBCHHHHHHHHHHHHHHTCCBEEEESCSHHHHHHHHH---SCSTTGGGSCGGG
T ss_pred HHHHHHHHHhcccCCceEEEecCCcCCCcCHHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHHHH---hhccccccccccc
Confidence 33333322 23456788888887778899999999999999999999998 55544543322 11211
Q ss_pred Cccccc-----ccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCC
Q 014320 255 GPEGHA-----LSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHS 329 (427)
Q Consensus 255 ~~~~~~-----~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~ 329 (427)
.+.++. ...+.. ..+... ......+.+..+.|+..... +.++.+++.|+.+ ++||++.....
T Consensus 267 ~~~~~~~~~~~~~~~~~---~~~~~~-~~~g~l~~~~~i~H~~~l~~-~~i~~l~~~g~~~--~~~p~~~~~~~------ 333 (420)
T 2imr_A 267 YPHTLAEVIGREPGPDL---TPVRYL-DELGVLAARPTLVHMVNVTP-DDIARVARAGCAV--VTCPRSNHHLE------ 333 (420)
T ss_dssp SCSSHHHHHTSCCCTTC---CHHHHH-HHHTCGGGCCEEEECCSCCH-HHHHHHHHHTCCE--EECHHHHHHTT------
T ss_pred hhhhhhhhccccccCCC---CHHHHH-HHcCCCCCCeEEEecCcCCH-HHHHHHHHcCCeE--EECHHHHHHhc------
Confidence 000000 000000 001111 11111122334556544332 4566677778654 45886432110
Q ss_pred CcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHh-cC
Q 014320 330 DFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVE-SG 408 (427)
Q Consensus 330 ~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~-~~ 408 (427)
. ..||+ ++++++|+++++||||.++....+. + .+ +.. .++ ..
T Consensus 334 -----~---~~~~l---------~~~~~~Gv~~~lgtD~~~~~~~~~~------~--------~~--~~~----~~~~~~ 376 (420)
T 2imr_A 334 -----C---GTFDW---------PAFAAAGVEVALGTDSVASGETLNV------R--------EE--VTF----ARQLYP 376 (420)
T ss_dssp -----C---CCCCH---------HHHHHTTCCEEECCCCHHHHSCSCT------H--------HH--HHH----HHHHCT
T ss_pred -----c---CCCCH---------HHHHHCCCeEEEECCCCccCCCCCH------H--------HH--HHH----HHhcCC
Confidence 1 13554 4689999999999998543111110 0 11 111 122 35
Q ss_pred CCCHHHHHHHHchhhhcC
Q 014320 409 QISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 409 ~l~l~~~v~~~t~npA~~ 426 (427)
+++++++++++|.||||+
T Consensus 377 ~ls~~~al~~aT~n~A~~ 394 (420)
T 2imr_A 377 GLDPRVLVRAAVKGGQRV 394 (420)
T ss_dssp TSCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHH
Confidence 799999999999999984
No 38
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}
Probab=99.95 E-value=2.6e-26 Score=225.41 Aligned_cols=298 Identities=15% Similarity=0.109 Sum_probs=180.0
Q ss_pred CccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcC----------CC
Q 014320 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM----------GS 121 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~----------g~ 121 (427)
+.+++|+|++|+++... ++|+|+||||++||+..+. ++.++||++|++|+|||||+|+|+.++.. +.
T Consensus 4 ~~~~li~n~~v~~~~~~--~~v~I~~g~I~~vg~~~~~-~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~g~ 80 (403)
T 2qt3_A 4 DFDLIIRNAYLSEKDSV--YDIGIVGDRIIKIEAKIEG-TVKDEIDAKGNLVSPGFVDAHTHMDKSFTSTGERLPKFWSR 80 (403)
T ss_dssp CEEEEEEEEEETTTTEE--EEEEEETTEEEEEESSCCS-CEEEEEECTTCBEEECEEEEEECGGGTTTTCSSSSCTTCSS
T ss_pred ccceEEEeeEecCCCee--EEEEEECCEEEEeecCCCC-CccceEcCCCCEecccceeeeeccchhhcccccccccccCC
Confidence 46789999999987643 8999999999999986543 24579999999999999999999987531 21
Q ss_pred C-----------------ChhhHHH----HHHHHHcCCceEEecCcCCCCC---cHHHH-HHHHHHHhccccceeceec-
Q 014320 122 E-----------------TIDDFFS----GQAAALAGGTTMHIDFVIPING---SLTAG-FEAYEKKAKNSCMDYGFHM- 175 (427)
Q Consensus 122 ~-----------------~~e~~~~----~~~~~l~~GvTtv~d~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~- 175 (427)
. ++++++. ..+.++++||||+.++...... ...+. .+...+. +..+......
T Consensus 81 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 158 (403)
T 2qt3_A 81 PYTRDAAIEDGLKYYKNATHEEIKRHVIEHAHMQVLHGTLYTRTHVDVDSVAKTKAVEAVLEAKEEL--KDLIDIQVVAF 158 (403)
T ss_dssp CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTTEEEEEEEEECSTTTTTHHHHHHHHHHHHH--TTTCEEEEEEE
T ss_pred CcccCcCHHHHHHHhhhcCHHHHHHHHHHHHHHHHHcCCcEEEEEEcccCccccchHHHHHHHHHHh--hcceeEEEEEc
Confidence 0 2223332 3566789999999765432211 11122 2222222 1222221110
Q ss_pred --cccCCChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecC-ChhhHHHHHHHHHHcC
Q 014320 176 --AITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE-NGDAVFEGQKRMIELG 252 (427)
Q Consensus 176 --~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e-~~~~~~~~~~~l~~~G 252 (427)
......++..+.++++. +.|...++. ++++.....+++.++++++.|+++|+++++|+. ......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~-~~g~~~~~~-~~p~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~---------- 226 (403)
T 2qt3_A 159 AQSGFFVDLESESLIRKSL-DMGCDLVGG-VDPATRENNVEGSLDLCFKLAKEYDVDIDYHIHDIGTVGV---------- 226 (403)
T ss_dssp CTTCTTTSTTHHHHHHHHH-HTTCSEEEC-BCTTTTTSCHHHHHHHHHHHHHHTTCEEEEEECCCHHHHH----------
T ss_pred CCcccccCcchHHHHHHHH-hcCCCeEEE-ecCCCCCCChHHHHHHHHHHHHHcCCCeEEEeCCcccchh----------
Confidence 00011223344455555 566665543 345545556679999999999999999999984 432221
Q ss_pred CCCcccccccCCHHHHHHHHHHHHHHHHhcC--CCEEEEcCCCHHH------HHHHHHHhhcCCCEEEecCccceeeCcc
Q 014320 253 ITGPEGHALSRPPLLEGEATTRAIRLAEFVN--TPLYVVHVMSMDA------MEEIAKARKAGQRVIGEPVVSGLVLDDS 324 (427)
Q Consensus 253 ~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g--~~~~i~H~~~~~~------~~~i~~~~~~G~~v~~~~~p~~l~~~~~ 324 (427)
.+++..++.+.+.| .++.+.|+...+. .+.++++++.|+.+.+ ||..
T Consensus 227 -----------------~~~~~~~~~~~~~g~~~~~~i~H~~~~~~~~~~~~~~~~~~l~~~g~~v~~--~p~~------ 281 (403)
T 2qt3_A 227 -----------------YSINRLAQKTIENGYKGRVTTSHAWCFADAPSEWLDEAIPLYKDSGMKFVT--CFSS------ 281 (403)
T ss_dssp -----------------HHHHHHHHHHHHTTCTTSEEEEECTHHHHSCHHHHHHHHHHHHHHTCEEEE--ETTT------
T ss_pred -----------------HHHHHHHHHHHHcCCCCCeEEEehhhhccCChhhHHHHHHHHHHcCCEEEE--CCCC------
Confidence 11222233333444 3788999976553 2678888889987766 5520
Q ss_pred cccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchh--hHhHHHHHH
Q 014320 325 WLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGI--EERMHLVWD 402 (427)
Q Consensus 325 ~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~--e~~l~~~~~ 402 (427)
. .. .+| ++++++.|+.+++|||+.... + .+.|.... +..+.....
T Consensus 282 ---~------~~---~~~---------~~~~~~~Gv~v~lgtD~~~~~----------~--~~~g~~~~~~~~~~~~~~~ 328 (403)
T 2qt3_A 282 ---T------PP---TMP---------VIKLLEAGINLGCASDNIRDF----------W--VPFGNGDMVQGALIETQRL 328 (403)
T ss_dssp ---C------CT---TCC---------HHHHHHTTCEEEEECCSCSSS----------S--CSCCCCCHHHHHHHHHHHT
T ss_pred ---C------CC---CCC---------HHHHHHcCCcEEEeCCCCCCC----------C--CCCCCCCHHHHHHHHHHHh
Confidence 0 00 122 567889999999999984211 0 01222111 112221110
Q ss_pred HHHhcCCCCHHHHHHHHchhhhcC
Q 014320 403 TMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 403 ~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
. ....++++++++++|.|||++
T Consensus 329 -~-~~~~~~~~~al~~~T~~~A~~ 350 (403)
T 2qt3_A 329 -E-LKTNRDLGLIWKMITSEGARV 350 (403)
T ss_dssp -T-CCSHHHHHHHHHHTTHHHHHH
T ss_pred -C-cCCccCHHHHHHHHHHHHHHh
Confidence 0 012378999999999999974
No 39
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A
Probab=99.95 E-value=2.9e-26 Score=229.83 Aligned_cols=316 Identities=17% Similarity=0.106 Sum_probs=197.7
Q ss_pred CccEEEECcEEEcCCC-----ceeeeEEEeC-CeEEEeeCCCCC--------CCCceEEeC-CCCEEecccccccccccc
Q 014320 52 SSKILIKGGTVVNAHH-----QQIADVYVED-GIVVAVQPNINV--------GDDVKVLDA-TGKFVMPGGIDPHTHLAM 116 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~-----~~~~~i~i~~-g~I~~vg~~~~~--------~~~~~viD~-~g~~v~PG~ID~H~H~~~ 116 (427)
+.+++|+|..|.+... .++++|+|+| |||++||+..+. .++.++||+ +|++|+|||||+|+|+.+
T Consensus 30 ~~~~~~~g~~i~~~~~~~~~~~~~~~v~I~~~g~I~~vg~~~~~~~~~~~~~~~~~~viD~~~g~~v~PG~ID~H~H~~~ 109 (476)
T 4aql_A 30 PLAHIFRGTFVHSTWTCPMEVLRDHLLGVSDSGKIVFLEEASQQEKLAKEWCFKPCEIRELSHHEFFMPGLVDTHIHASQ 109 (476)
T ss_dssp -CCEEEEEEEEECCSSCSCEEEEEEEEEECTTSBEEEEEEGGGHHHHHHHTTCCGGGCEECCTTCEEEECEEEEEEEGGG
T ss_pred CccEEEEccEEecCCCCceeEecCcEEEEecCCeEEEecCcchhhhhhhhccCCCceEEEcCCCCEEeCCeeccccchHH
Confidence 4568999999987542 3689999998 999999986321 134689995 589999999999999866
Q ss_pred CcC-CCC--------------------Chhh----HHH-HHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccce
Q 014320 117 EFM-GSE--------------------TIDD----FFS-GQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMD 170 (427)
Q Consensus 117 ~~~-g~~--------------------~~e~----~~~-~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (427)
... |.. ..++ .+. ....++++||||+.++...........++...+.+.+..+.
T Consensus 110 ~~~rg~~~d~~l~~wL~~~~~p~e~~~~~~~~~~~~~~~~~~e~l~~G~Tt~~~~~~~~~~~~~~~~~a~~~~G~r~~~~ 189 (476)
T 4aql_A 110 YSFAGSSIDLPLLEWLTKYTFPAEHRFQNIDFAEEVYTRVVRRTLKNGTTTACYFATIHTDSSLLLADITDKFGQRAFVG 189 (476)
T ss_dssp GGGTTSCCCSCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHhcCCCHHHHHHHhhhhHHHhcCCHHHHHHHHHHHHHHHHHCCeeEEEEecccCchHHHHHHHHHHHhCCEEEEe
Confidence 421 110 1111 112 23568999999999875332222334566667777664443
Q ss_pred eceecc------ccCCChhhHHHHHHHHHH---cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhh
Q 014320 171 YGFHMA------ITKWDEVVSDEMEVMVKE---KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDA 240 (427)
Q Consensus 171 ~~~~~~------~~~~~~~~~~~~~~l~~~---~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~ 240 (427)
...... .....++.+++.++++++ .+...++..++++..+.++++.++++++.|+++|+++++|+ |+..+
T Consensus 190 ~~~~d~~~~~p~~~~~~~~~l~~~~~~i~~~~~~~~~~v~~~l~p~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~e 269 (476)
T 4aql_A 190 KVCMDLNDTFPEYKETTEESIKETERFVSEMLQKNYSRVKPIVTPRFSLSCSETLMGELGNIAKTRDLHIQSHISENRDE 269 (476)
T ss_dssp CEECSCCSSCTTSCCCHHHHHHHHHHHHHHHHHHTCSSEEECBEECCTTTSCHHHHHHHHHHHHHTTCCEEEEESCSHHH
T ss_pred eccccCCCCCcccccCHHHHHHHHHHHHHHHhcCCCCceEEEEeCCcCCcCCHHHHHHHHHHHHHcCCceEEEecCCHHH
Confidence 322111 111123445555555432 23557888889999999999999999999999999999996 66666
Q ss_pred HHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCcccee
Q 014320 241 VFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLV 320 (427)
Q Consensus 241 ~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~ 320 (427)
+..+.+. .|... + ..+.++.....+.+..+.|+..... +.++.+++.|+.+.. ||....
T Consensus 270 ~~~~~~~---~~~~~-------~--------~~~~~~~~g~l~~~~~~~H~~~l~~-~~~~~l~~~g~~v~~--~P~sn~ 328 (476)
T 4aql_A 270 VEAVKNL---YPSYK-------N--------YTSVYDKNNLLTNKTVMAHGCYLSA-EELNVFHERGASIAH--CPNSNL 328 (476)
T ss_dssp HHHHHHH---CTTSS-------S--------HHHHHHTTTCCSTTEEEEECTTCCH-HHHHHHHHHTCEEEE--CHHHHH
T ss_pred HHHHHHH---hCCCC-------C--------HHHHHHHcCCCCCCEEEEeCCCCCH-HHHHHHHHcCCEEEE--Cchhhh
Confidence 6544321 11100 0 0011111122345678889877654 567888888877665 775322
Q ss_pred eCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHH
Q 014320 321 LDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLV 400 (427)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~ 400 (427)
... .. .+| ++++++.|+.+++|||+.+... .+.. .+.+....
T Consensus 329 ~l~-----------~g---~~p---------~~~~~~~Gv~v~lGtD~~~~~~-~~~~--------------~~~~~a~~ 370 (476)
T 4aql_A 329 SLS-----------SG---FLN---------VLEVLKHEVKIGLGTDVAGGYS-YSML--------------DAIRRAVM 370 (476)
T ss_dssp HTT-----------CC---CCC---------HHHHHHTTCEEEECCCTTTSSC-CCHH--------------HHHHHHHH
T ss_pred hhC-----------cc---hHH---------HHHHHHCCCcEEEeCCCCCCCC-CCHH--------------HHHHHHHH
Confidence 111 11 233 4568899999999999754321 1110 12333333
Q ss_pred HHHHH-----hcCCCCHHHHHHHHchhhhcC
Q 014320 401 WDTMV-----ESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 401 ~~~~~-----~~~~l~l~~~v~~~t~npA~~ 426 (427)
+.+.. ...+++++++++++|.|||+.
T Consensus 371 ~~~~~~~~~~~~~~l~~~~al~~aT~~~A~~ 401 (476)
T 4aql_A 371 VSNILLINKVNEKSLTLKEVFRLATLGGSQA 401 (476)
T ss_dssp HHHHHHHTTSSSSCCCHHHHHHHHTHHHHHH
T ss_pred HHhhhhcccCCCCcCCHHHHHHHHHHHHHHH
Confidence 32222 236899999999999999974
No 40
>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A
Probab=99.95 E-value=4e-27 Score=231.57 Aligned_cols=290 Identities=18% Similarity=0.203 Sum_probs=174.9
Q ss_pred EEEECcEEEcCCC--ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcC-C-----------
Q 014320 55 ILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G----------- 120 (427)
Q Consensus 55 ~~i~~~~i~~~~~--~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g----------- 120 (427)
++|+|++|++++. ..+++|+|+||||++||+.. ++.+ ||++|++|+|||||+|+|+..... +
T Consensus 1 ~li~n~~v~~~~~~~~~~~~v~I~~g~I~~vg~~~---~~~~-iD~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~ 76 (406)
T 1p1m_A 1 MIIGNCLILKDFSSEPFWGAVEIENGTIKRVLQGE---VKVD-LDLSGKLVMPALFNTHTHAPMTLLRGVAEDLSFEEWL 76 (406)
T ss_dssp CEEEEEEECCSTTSCCEEEEEEEETTEEEEEEESS---CCCS-EECTTEEEEECEEEEEECGGGGGGTTSSCSCCHHHHH
T ss_pred CEEEccEEEecCccccccceEEEECCEEEEeeCCC---Ccce-ecCCCcEEeecccchhhccchhhhccccCCCCHHHHH
Confidence 3799999998764 56789999999999999753 2356 999999999999999999976421 1
Q ss_pred ---------CCChhhHHHHH----HHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccccCCChhhHHH
Q 014320 121 ---------SETIDDFFSGQ----AAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDE 187 (427)
Q Consensus 121 ---------~~~~e~~~~~~----~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (427)
..++++++..+ +.++++||||++|+.. .....++..++.+.+..+..++. .......+.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~----~~~~~~~~~~~~g~r~~~~~~~~-~~~~~~~~~~~~ 151 (406)
T 1p1m_A 77 FSKVLPIEDRLTEKMAYYGTILAQMEMARHGIAGFVDMYF----HEEWIAKAVRDFGMRALLTRGLV-DSNGDDGGRLEE 151 (406)
T ss_dssp HTTHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEEEEES----SHHHHHHHHHHHCCEEEEEEEEC-CBTTBCTTHHHH
T ss_pred HhhhccchhcCCHHHHHHHHHHHHHHHHhcCcEEEEechh----CHHHHHHHHHHcCCEEEEEcccc-cCCCCHHHHHHH
Confidence 02345554433 4568999999999753 13334444444444432222111 111112333444
Q ss_pred HHHHHHH-cCC-CeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcCCCCcccccccCC
Q 014320 188 MEVMVKE-KGI-NSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRP 264 (427)
Q Consensus 188 ~~~l~~~-~g~-~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~~~~~~~p 264 (427)
..++++. .+. ..+|+.+.++.++.++++.++++++.|+++|+++++|+ ++.+.+....+.+ ..|
T Consensus 152 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~-~~g------------ 218 (406)
T 1p1m_A 152 NLKLYNEWNGFEGRIFVGFGPHSPYLCSEEYLKRVFDTAKSLNAPVTIHLYETSKEEYDLEDIL-NIG------------ 218 (406)
T ss_dssp HHHHHHHHTTGGGTEEEEEEECCTTTSCHHHHHHHHHHHHHTTCCEEEEESCSTTCCCCTHHHH-TTT------------
T ss_pred HHHHHHHhhCCCCcEEEEEecCccCcCCHHHHHHHHHHHHHCCCcEEEEcCCCchHHHHHHHhh-hCC------------
Confidence 4444432 222 45787777877777899999999999999999999998 4543332111100 000
Q ss_pred HHHHHHHHHHHHHHHHhcCCC-EEEEcCC---CHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEc
Q 014320 265 PLLEGEATTRAIRLAEFVNTP-LYVVHVM---SMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMS 340 (427)
Q Consensus 265 ~~~e~~a~~~~~~~~~~~g~~-~~i~H~~---~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~ 340 (427)
.++.|.. ..+.|+. .... +.++.+ ...||...+ . ..
T Consensus 219 --------------~~~~g~~~~~~~H~~~~~~~~~-~~~~~~--------~~~~p~~~~-----------~------~~ 258 (406)
T 1p1m_A 219 --------------LKEVKTIAAHCVHLPERYFGVL-KDIPFF--------VSHNPASNL-----------K------LG 258 (406)
T ss_dssp --------------TTTSCEEEEECTTCCGGGTTTT-TTSSEE--------EEECHHHHH-----------H------TT
T ss_pred --------------HhHcCcceeEeeeccCcccCCH-HHHHHH--------HHhCcHHHh-----------h------cC
Confidence 0001110 2344443 2221 111111 123432110 0 00
Q ss_pred CCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHc
Q 014320 341 PPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTS 420 (427)
Q Consensus 341 pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t 420 (427)
+ ....+++++++|+++++||||.+++...+. -.+.+++.++..++..+++|++++++++|
T Consensus 259 ~------~~~~~~~~~~~Gv~~~lgtD~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~ls~~~al~~~T 318 (406)
T 1p1m_A 259 N------GIAPVQRMIEHGMKVTLGTDGAASNNSLNL--------------FFEMRLASLLQKAQNPRNLDVNTCLKMVT 318 (406)
T ss_dssp C------CCCCHHHHHHTTCEEEECCCCTTTTSCCCH--------------HHHHHHHHHHHHTTCTTSSCHHHHHHHHT
T ss_pred C------CcCcHHHHHhCCCeEEEECCCCcCCCCCCH--------------HHHHHHHHHHhcccCCCCCCHHHHHHHHH
Confidence 1 112378899999999999999776432221 12556666665444356899999999999
Q ss_pred hhhhcC
Q 014320 421 TEWGRL 426 (427)
Q Consensus 421 ~npA~~ 426 (427)
.|||++
T Consensus 319 ~~~A~~ 324 (406)
T 1p1m_A 319 YDGAQA 324 (406)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999984
No 41
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=99.95 E-value=4.1e-26 Score=225.26 Aligned_cols=301 Identities=16% Similarity=0.147 Sum_probs=184.6
Q ss_pred CccEEEECcEEEcCCC--c-eeeeEEEeCCeEEEeeCCCCCCCCc--eEEeCCCCEEeccccccccccccCcCCC-----
Q 014320 52 SSKILIKGGTVVNAHH--Q-QIADVYVEDGIVVAVQPNINVGDDV--KVLDATGKFVMPGGIDPHTHLAMEFMGS----- 121 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~--~-~~~~i~i~~g~I~~vg~~~~~~~~~--~viD~~g~~v~PG~ID~H~H~~~~~~g~----- 121 (427)
.++++|+|++|++++. . .+++|+|+||||++|++.. .+++. ++||++|++|+|||||+|+|+.......
T Consensus 6 ~~~~li~n~~v~~~~~~~~~~~~~v~I~~g~I~~vg~~~-~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~ 84 (418)
T 2qs8_A 6 DSKTLIHAGKLIDGKSDQVQSRISIVIDGNIISDIKKGF-ISSNDFEDYIDLRDHTVLPGLMDMHVHFGQEYQSKAQAPI 84 (418)
T ss_dssp -CCEEEEEEEECCSSCSSCEEEEEEEEETTEEEEEEESC-CCCTTSSEEEEEEEEEEEECEEEEEECTTCCCCCTTTSCS
T ss_pred CccEEEEeeEEEeCCCCccccCcEEEEECCEEEEEeCCC-CCCCCcceEEECCCCEECCCeeeeeeccccCCCCCchhhh
Confidence 3568999999999876 2 5689999999999999754 23456 8999999999999999999998752110
Q ss_pred -CChhhHH----HHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhc----ccccee------ceecc----------
Q 014320 122 -ETIDDFF----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK----NSCMDY------GFHMA---------- 176 (427)
Q Consensus 122 -~~~e~~~----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~----~~~~~~------~~~~~---------- 176 (427)
.+++... ..++.++++||||++|+.... .....++...+.+. +..... +.+..
T Consensus 85 ~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~--~~~~~~~~~~~~g~~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~ 162 (418)
T 2qs8_A 85 KVEREMQAILATQHAYVTFKSGFTTVRQVGDSG--LVAISLRDAINSGKLAGPRIFAAGKTIATTGGHADPTNGKAVDDY 162 (418)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTEEEEEECCCSS--SHHHHHHHHHHTTSSCCCEEEECCSCBEETTCTTCTTTTCCGGGC
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCCEEEeCCCCc--cccHHHHHHHHCCCCCCCeEEecCccccccCCCcccccccccccc
Confidence 2333322 256778999999999985322 12223444444332 111100 00100
Q ss_pred --------ccCCChhhHHHHHHHHHHcCCCeEEEEEecC--------CCccCCHHHHHHHHHHHHHcCCcEEEecCChhh
Q 014320 177 --------ITKWDEVVSDEMEVMVKEKGINSFKFFMAYK--------GSFMINDELLIEGFKRCKSLGALAMVHAENGDA 240 (427)
Q Consensus 177 --------~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~--------~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~ 240 (427)
.....++..+.+++.. ..|.+.+|++.+.. +.+.+++++++++++.|+++|+++.+|+++...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~ 241 (418)
T 2qs8_A 163 DYPVPEQGVVNGPYEVYAAVRQRY-KDGADGIKITVTGGVLSVAKSGQNPQFTQEEVDAVVSAAKDYGMWVAVHAHGAEG 241 (418)
T ss_dssp CCCCGGGTEECSHHHHHHHHHHHH-HHTCSEEEEECBCCSSSSSSCSSCBCSCHHHHHHHHHHHHHTTCEEEEEECSHHH
T ss_pred ccccccccccCCHHHHHHHHHHHH-HcCCCEEEEEecCCCCCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEECCHHH
Confidence 0000112222233333 46888999997531 335679999999999999999999999987654
Q ss_pred HHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCcccee
Q 014320 241 VFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLV 320 (427)
Q Consensus 241 ~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~ 320 (427)
+... ++ .|.. .+.|+..... +.++++++.|+.+ ||.+..
T Consensus 242 i~~~-------------------------------~~----~g~~-~i~H~~~~~~-~~i~~l~~~gv~v----~p~~~~ 280 (418)
T 2qs8_A 242 MKRA-------------------------------IK----AGVD-SIEHGTFMDL-EAMDLMIENGTYY----VPTISA 280 (418)
T ss_dssp HHHH-------------------------------HH----HTCS-EEEECTTCCH-HHHHHHHHHTCEE----ECCHHH
T ss_pred HHHH-------------------------------HH----cCCC-EEEECCCCCH-HHHHHHHHCCCEE----eeeech
Confidence 4221 11 2332 4788776543 6678888888643 454322
Q ss_pred eCcccccCCCcccCceeEEcCCCCC-c-------ccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCch
Q 014320 321 LDDSWLWHSDFVTAAKYVMSPPIRA-S-------GHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNG 392 (427)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~pplr~-~-------~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~ 392 (427)
++. +.. + ......||.+. + .....++++++.|+.+++|||+ |..+.. ++ .
T Consensus 281 ~~~--~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~v~~gTD~-~~~~~~------~~--------~ 338 (418)
T 2qs8_A 281 GEF--VAE-K----SKIDNFFPEIVRPKAASVGPQISDTFRKAYEKGVKIAFGTDA-GVQKHG------TN--------W 338 (418)
T ss_dssp HHH--HHH-H----TTSTTSSCTTTHHHHHHHHHHHHHHHHHHHHHTCCBCCCCCB-TTBCTT------CT--------T
T ss_pred HHH--hhh-h----ccccCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeCCC-CcCCcc------hH--------H
Confidence 110 000 0 00011244432 1 1235688999999999999997 432110 11 1
Q ss_pred hhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 393 IEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 393 ~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
.+.+ .+++ .++|++++++++|.|||++
T Consensus 339 ~e~~------~~~~-~gls~~eal~~~T~n~A~~ 365 (418)
T 2qs8_A 339 KEFV------YMVE-NGMPAMKAIQSATMETAKL 365 (418)
T ss_dssp HHHH------HHHH-TTCCHHHHHHHTTHHHHHH
T ss_pred HHHH------HHHH-cCCCHHHHHHHHHHHHHHH
Confidence 1211 1223 3799999999999999974
No 42
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14
Probab=99.95 E-value=9e-28 Score=233.82 Aligned_cols=298 Identities=14% Similarity=0.053 Sum_probs=181.9
Q ss_pred CccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCC-CEEeccccccccccccCcCCCCChhhHHHH
Q 014320 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATG-KFVMPGGIDPHTHLAMEFMGSETIDDFFSG 130 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g-~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~ 130 (427)
+++++|+|++|+++. +++|+|+||||++|++... +++.++||++| ++|+|||||+|+|+..+ +...++ ..
T Consensus 4 ~~~~~i~~~~v~~~~---~~~v~i~~g~I~~ig~~~~-~~~~~~iD~~g~~~v~PG~ID~H~H~~~~--~~~~~~---~~ 74 (379)
T 2ics_A 4 DYDLLIKNGQTVNGM---PVEIAIKEKKIAAVAATIS-GSAKETIHLEPGTYVSAGWIDDHVHCFEK--MALYYD---YP 74 (379)
T ss_dssp CEEEEEEEEECTTSC---EEEEEEETTEEEEEESCCC-CCEEEEEECCTTCEEEECEEEEEECCCTT--SSSSCC---CH
T ss_pred cccEEEECCEEEcCC---cceEEEECCEEEEecCCCC-CCCCcEEeCCCCEEEccCEEEeccccCcc--CccccC---ch
Confidence 357899999999864 7899999999999997542 23457999999 99999999999999875 322222 23
Q ss_pred HHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhc--cccceeceeccccC--C---ChhhHHHHHHHHHH--cCCCeEE
Q 014320 131 QAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK--NSCMDYGFHMAITK--W---DEVVSDEMEVMVKE--KGINSFK 201 (427)
Q Consensus 131 ~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~---~~~~~~~~~~l~~~--~g~~~ik 201 (427)
.+.++++||||++|++...........+..++... +..+++...+.... . .+...++++++++. .++.++|
T Consensus 75 ~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 154 (379)
T 2ics_A 75 DEIGVKKGVTTVIDAGTTGAENIHEFYDLAQQAKTNVFGLVNISKWGIVAQDELADLSKVQASLVKKAIQELPDFVVGIK 154 (379)
T ss_dssp HHHTGGGTEEEEEEESSSCTTTHHHHHHHHHTSSSEEEEEEESSTTTTSSSCTTSSGGGCCHHHHHHHHHHCTTTEEEEE
T ss_pred hhhHhhCceeEEEcCCCCCccCHHHHHHHHHhhcccEEEEccccccCCCCHHHHHHHHHHHHHHHHHHHHhhhCcceEEE
Confidence 56789999999999764322233233332222221 12222211111111 1 11224566666643 3677888
Q ss_pred EEEecCCCccCCHHHHHHHHHHHHH-cCCcEEEecCC-hhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHH
Q 014320 202 FFMAYKGSFMINDELLIEGFKRCKS-LGALAMVHAEN-GDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLA 279 (427)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~e~-~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~ 279 (427)
++++++....++.+.++++++.|++ +|+++.+|+.+ .....+..+.+ +.| ....|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~v~~H~~~~~~~~~~~~~~~-~~g--~~~~H~~------------------ 213 (379)
T 2ics_A 155 ARMSRTVIGDNGITPLELAKQIQQENQEIPLMVHIGSAPPHLDEILALM-EKG--DVLTHCF------------------ 213 (379)
T ss_dssp EEESHHHHTTCTTHHHHHHHHHHHTTTTCCEEEEECSSSSCHHHHHHHC-CTT--CEEESTT------------------
T ss_pred EeccccccccchHHHHHHHHHHHHHhcCCeEEEeCCCCcchHHHHHHHh-hcC--Ceeeecc------------------
Confidence 8886543334678899999999999 99999999854 32222222211 112 1111110
Q ss_pred HhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcC
Q 014320 280 EFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATG 359 (427)
Q Consensus 280 ~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G 359 (427)
.+.+.++.|.+.....+.++++++.|+ +++++|.+.. .+.+.++++++.|
T Consensus 214 --~~~~~~~~~~s~~~~~~~~~~~~~~g~--~~~~~p~~~~--------------------------~~~~~~~~~~~~G 263 (379)
T 2ics_A 214 --NGKENGILDQATDKIKDFAWQAYNKGV--VFDIGHGTDS--------------------------FNFHVAETALREG 263 (379)
T ss_dssp --CCSTTSSEETTTTEECHHHHHHHHTTC--EEECCCTTTS--------------------------CCHHHHHHHHHTT
T ss_pred --CCCccchhhccCHHHHHHHHHHHHcCC--EEEecCCCCC--------------------------cCHHHHHHHHHcC
Confidence 111223444433322366777778885 4445664211 0235588899999
Q ss_pred -CceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 360 -ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 360 -~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
.+++++||+.+. .+.. .+ +..++..+..+++ .++|++++++++|.||||+
T Consensus 264 ~~~~~l~TD~~~~---~~~~-------~~------~~~~~~~l~~~~~-~~ls~~~~~~~~T~n~A~~ 314 (379)
T 2ics_A 264 MKAASISTDIYIR---NREN-------GP------VYDLATTMEKLRV-VGYDWPEIIEKVTKAPAEN 314 (379)
T ss_dssp CCCSBCCCCBCHH---HHHS-------SS------CCCHHHHHHHHHH-HTCCHHHHHHTTTHHHHHH
T ss_pred CCcceEeccCccc---CCCC-------Cc------HhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHH
Confidence 999999998422 1110 01 1244444444433 4699999999999999985
No 43
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=99.94 E-value=9.8e-26 Score=220.06 Aligned_cols=291 Identities=17% Similarity=0.126 Sum_probs=179.6
Q ss_pred ccEEEECcEE-EcCCC----ceeeeEEEeCCeEEEeeCCCCC-CCC-ceEEeCCCCEEeccccccccccccCcCCCCChh
Q 014320 53 SKILIKGGTV-VNAHH----QQIADVYVEDGIVVAVQPNINV-GDD-VKVLDATGKFVMPGGIDPHTHLAMEFMGSETID 125 (427)
Q Consensus 53 ~~~~i~~~~i-~~~~~----~~~~~i~i~~g~I~~vg~~~~~-~~~-~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e 125 (427)
.+++|+|++| ++++. ..+++|+|+||||++|++.... +++ .++||++|++|+|||||+|+|+..+ +.....
T Consensus 2 ~~~li~n~~v~~~~~~~~~~~~~~~v~I~~g~I~~Ig~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~--~~~~~~ 79 (386)
T 2vun_A 2 SKTIIKNIGKIVSGDIKSPVLQADTIVVEDGLIAAIGGEELMKDAGDATIIDAAGSTVTPGLLDTHVHVSGG--DYAPRQ 79 (386)
T ss_dssp CEEEEESCSEEECSCTTSCEECCSEEEEETTEEEEEESGGGGTTCTTCEEEECTTCEEEECEEEEEECCCST--TEEGGG
T ss_pred ccEEEeccEEEEcCCCCccccccceEEEECCEEEEecCccccCCCCCceEEcCCCCEEccceeeccccccCC--CcChhH
Confidence 4689999999 98764 3568999999999999973221 234 5899999999999999999999753 211000
Q ss_pred hHHHHHHHHHcCCceEEecCcCC---CCCcHHHHHH---HHHH---Hhccccceeceecc---ccCCChhhHHHHHHHHH
Q 014320 126 DFFSGQAAALAGGTTMHIDFVIP---INGSLTAGFE---AYEK---KAKNSCMDYGFHMA---ITKWDEVVSDEMEVMVK 193 (427)
Q Consensus 126 ~~~~~~~~~l~~GvTtv~d~~~~---~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~ 193 (427)
.....++.++++||||++|+... ......+.++ .... .+.+. ....+..+ ..... ..++++++.
T Consensus 80 ~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~--~~~~~~~~~- 155 (386)
T 2vun_A 80 KTMDFISSALHGGVTTMISAGSPHFPGRPKDAAGTKALAITLSKSYYNARP-AGVKVHGGAVILEKGL--TEEDFIEMK- 155 (386)
T ss_dssp TEESHHHHHHTTTEEEEEECCCTTSTTCCCSHHHHHHHHHHHHHHHHHCCG-GGCEEECCEECCCTTC--CHHHHHHHH-
T ss_pred HHHHHHHHHHhCCceEEEeccccccCCChhhHHHHHHHHHHhhcccccccc-cceeeccCcccccCCc--CHHHHHHHH-
Confidence 11125788999999999997621 1111111222 1111 11110 00111111 11111 135677776
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATT 273 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~ 273 (427)
+.|...+|++... ..++++.++++++.|+++|+++++|+++..... .+. +.+
T Consensus 156 ~~g~~~ik~~~~~---~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~--------~~~----------------~~i- 207 (386)
T 2vun_A 156 KEGVWIVGEVGLG---TIKNPEDAAPMVEWAHKHGFKVQMHTGGTSIPG--------SST----------------VTA- 207 (386)
T ss_dssp HTTCCEEEEETSS---SCCSHHHHHHHHHHHHHTTCEEEEECSCCSCST--------TCS----------------CCH-
T ss_pred HhCCCeEEEeecC---CCCCHHHHHHHHHHHHHCCCeEEEecCCccccc--------cCH----------------HHH-
Confidence 6788899987532 236899999999999999999999995321100 000 001
Q ss_pred HHHHHHHhcCCCEEEEcCCC----HHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccH
Q 014320 274 RAIRLAEFVNTPLYVVHVMS----MDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHN 349 (427)
Q Consensus 274 ~~~~~~~~~g~~~~i~H~~~----~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~ 349 (427)
..+.+.|.+ .+.|+.. .. .+.++.+++.|+.+.. +++ + +. ...+.
T Consensus 208 ---~~~~~~G~~-~i~H~~~~~~~~~-~~~~~~~~~~g~~vl~--~~~----~------------------g~--~~~~~ 256 (386)
T 2vun_A 208 ---DDVIKTKPD-VVSHINGGPTAIS-VQEVDRIMDETDFAME--IVQ----C------------------GN--PKIAD 256 (386)
T ss_dssp ---HHHHHHCCS-EEETTTCSSSCCC-HHHHHHHHHHCCCEEE--EES----S------------------SC--HHHHH
T ss_pred ---HHHHHcCCC-EEEEccCCCCCCC-HHHHHHHHHcCCeEEE--ecc----C------------------Cc--ccccH
Confidence 111234555 4899876 33 3678888888987611 111 0 00 12345
Q ss_pred HHHHHHHhcCC--ceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 350 KALQAALATGI--LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 350 ~~l~~~l~~G~--~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
..++++++.|+ .++++||+ |+.. ...+.|....+.+ .+ .+.+++++++++++|.||||+
T Consensus 257 ~~~~~~~~~g~~d~v~lgTD~-p~~~----------~~~~~g~~~~~~~------~~-~~~~ls~~~~~~~~T~n~A~~ 317 (386)
T 2vun_A 257 YVARRAAEKGQLGRVIFGNDA-PSGT----------GLIPLGILRNMCQ------IA-SMSDIDPEVAVCMATGNSTAV 317 (386)
T ss_dssp HHHHHHHHHTCGGGEEEECCB-SBTT----------BBCTTHHHHHHHH------HH-HHSCCCHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHcCCCceeEEecCC-CCCC----------CCCcchhHHHHHH------HH-hhcCCCHHHHHHHHhHHHHHH
Confidence 67899999999 88999998 4211 1112333333322 12 236799999999999999984
No 44
>2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens}
Probab=99.94 E-value=8.8e-27 Score=229.98 Aligned_cols=293 Identities=18% Similarity=0.145 Sum_probs=175.5
Q ss_pred CCCCccEEEECcEEEcCCC---ceeeeEEEe-CCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCCh
Q 014320 49 IQSSSKILIKGGTVVNAHH---QQIADVYVE-DGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETI 124 (427)
Q Consensus 49 ~~~~~~~~i~~~~i~~~~~---~~~~~i~i~-~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~ 124 (427)
..|+.+++|+|++|++++. ..+++|+|+ ||||++|++..+.+.+.++||++|++|+|||||+|+|+..+ +....
T Consensus 11 ~~~~~~~li~n~~vv~~~~~~~~~~~~v~I~~~g~I~~Ig~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~--~~~~~ 88 (417)
T 2ogj_A 11 TPLQAPILLTNVKPVGFGKGASQSSTDILIGGDGKIAAVGSALQAPADTQRIDAKGAFISPGWVDLHVHIWHG--GTDIS 88 (417)
T ss_dssp ---CCCEEEEEEEECSSCTTCCCSCEEEEECTTSBEEEEETTCCCSSCEEECCC--CEEEECEEEEEECCCBT--TBSSC
T ss_pred ccCCCcEEEECCEEEcCCCCccCccceEEEecCCEEEEeccCCCCCCCCeEEECCCCEEccCeeecccccccc--ccccC
Confidence 3445689999999999765 367899999 99999999754333346899999999999999999999876 22221
Q ss_pred hhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhc---cccceeceecccc-----CCC---hhhHHHHHHHHH
Q 014320 125 DDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK---NSCMDYGFHMAIT-----KWD---EVVSDEMEVMVK 193 (427)
Q Consensus 125 e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-----~~~---~~~~~~~~~l~~ 193 (427)
+. ..+.++++||||++|++...........+...+... +..+++...+... ... ....++++++.+
T Consensus 89 ~~---~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~G~~~~~~~~e~~~~~~~~~~~~~~~~~ 165 (417)
T 2ogj_A 89 IR---PSECGAERGVTTLVDAGSAGEANFHGFREYIIEPSRERIKAFLNLGSIGLVACNRVPELRDIKDIDLDRILECYA 165 (417)
T ss_dssp CC---GGGTSGGGTEEEEEEESSCCSTTHHHHHHHTTTTCSSEEEEEEESSTTTTTTTTTSCSCSSGGGCCHHHHHHHHH
T ss_pred CC---HHHHHHhCCcCeEEeCCcCCCcCHHHHHHHHhhccccCeEEEeccccCcCCCCCCcccccchhhcCHHHHHHHHH
Confidence 11 134579999999999864333222221121111111 1222221111100 000 112345566553
Q ss_pred H--cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChh-hHHHHHHHHHHcCCCCcccccccCCHHHHHH
Q 014320 194 E--KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGD-AVFEGQKRMIELGITGPEGHALSRPPLLEGE 270 (427)
Q Consensus 194 ~--~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~-~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~ 270 (427)
. .++..+|+++++.....++.+.++++++.|++.|+++++|+++.. ........+
T Consensus 166 ~~~~~~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~l---------------------- 223 (417)
T 2ogj_A 166 ENSEHIVGLKVRASHVITGSWGVTPVKLGKKIAKILKVPMMVHVGEPPALYDEVLEIL---------------------- 223 (417)
T ss_dssp TCTTTEEEEEEEESHHHHTTCTTHHHHHHHHHHHHHTCCEEEEECSSSSCHHHHHHHC----------------------
T ss_pred hCCCceEEEEEEecCCccccccHHHHHHHHHHHHHcCCcEEEEcCCCcccHHHHHHHh----------------------
Confidence 2 234578888875433446788899999999999999999996432 122111110
Q ss_pred HHHHHHHHHHhcCCCEEEEcCCC----------HHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEc
Q 014320 271 ATTRAIRLAEFVNTPLYVVHVMS----------MDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMS 340 (427)
Q Consensus 271 a~~~~~~~~~~~g~~~~i~H~~~----------~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~ 340 (427)
+....+.|+.. ....+.++++++.|+.+ +.+|...
T Consensus 224 ------------~~g~~~~H~~~~~~~~~~~~~~~~~~~i~~~~~~g~~v--~~~~~~~--------------------- 268 (417)
T 2ogj_A 224 ------------GPGDVVTHCFNGKSGSSIMEDEDLFNLAERCAGEGIRL--DIGHGGA--------------------- 268 (417)
T ss_dssp ------------CTTCEEETTTCCCTTTCTTSCHHHHHHHHHC--CCCEE--ECCBCSS---------------------
T ss_pred ------------cCCCEEEeccCCCccchhccCHHHHHHHHHHHhcCcEE--EecCCCc---------------------
Confidence 01133555432 33446777777888544 3444210
Q ss_pred CCCCCcccHHHHHHHHhcC-CceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHH
Q 014320 341 PPIRASGHNKALQAALATG-ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLT 419 (427)
Q Consensus 341 pplr~~~~~~~l~~~l~~G-~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~ 419 (427)
......++++++.| ++++++|||. ++. .. | -...++.++...++ .+++++++++++
T Consensus 269 -----~~~~~~~~~~~~~G~~~~~lgtD~~-~~~-~~------------g---~~~~l~~~~~~~~~-~~l~~~~al~~~ 325 (417)
T 2ogj_A 269 -----SFSFKVAEAAIARGLLPFSISTDLH-GHS-MN------------F---PVWDLATTMSKLLS-VDMPFENVVEAV 325 (417)
T ss_dssp -----SCCHHHHHHHHHTTCCCSBCCBCBS-TTT-TT------------T---TCCCHHHHHHHHHH-TTCCHHHHHHTT
T ss_pred -----cccchHHHHHHHcCCCceEEEcCCC-CCc-cC------------C---ChhHHHHHHHHHHH-cCCCHHHHHHHH
Confidence 01245688999999 9999999986 431 00 1 01245555544444 569999999999
Q ss_pred chhhhcC
Q 014320 420 STEWGRL 426 (427)
Q Consensus 420 t~npA~~ 426 (427)
|.||||+
T Consensus 326 T~n~A~~ 332 (417)
T 2ogj_A 326 TRNPASV 332 (417)
T ss_dssp THHHHHH
T ss_pred HHHHHHH
Confidence 9999984
No 45
>3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP}
Probab=99.94 E-value=3.5e-26 Score=226.22 Aligned_cols=309 Identities=16% Similarity=0.064 Sum_probs=190.0
Q ss_pred EEEECcEEEcCCC-ceeeeEEEeCCeEEEeeCCCCCC---CCceEEeCCCCEEeccccccccccccCcCCC----C----
Q 014320 55 ILIKGGTVVNAHH-QQIADVYVEDGIVVAVQPNINVG---DDVKVLDATGKFVMPGGIDPHTHLAMEFMGS----E---- 122 (427)
Q Consensus 55 ~~i~~~~i~~~~~-~~~~~i~i~~g~I~~vg~~~~~~---~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~----~---- 122 (427)
++|+|++|++++. .++++|+| ||||++||+..+.+ ++.++||++|++|+|||||+|+|+.++.... .
T Consensus 2 ~~i~~~~v~~~~~~~~~~~v~i-~g~I~~Vg~~~~~~~~~~~~~vid~~g~~v~PGlId~H~H~~~~~~rg~~~~~~l~~ 80 (427)
T 3v7p_A 2 RIIKPFAILTPQTIIQDKAVAF-DKKIEAIDTVENLIKKYPNAAVEHDENSLLLPGFANPHLHLEFSANKATLQYGDFIP 80 (427)
T ss_dssp EEEEEEEEECSSSEEESCEEEE-SSBEEEEECHHHHHHHCTTSEEEEEEEEEEEECEEEEEECGGGTTCSSCSCCSSHHH
T ss_pred EEEECCEEEcCCCEEeCcEEEE-CCEEEEecChhhhccccCCceEEeCCCCEEecCEeecccCcchhhcccccccCCHHH
Confidence 5899999999877 45789999 99999999854322 3568999999999999999999998653211 0
Q ss_pred ------------ChhhH----HHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccccCCChhhHH
Q 014320 123 ------------TIDDF----FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSD 186 (427)
Q Consensus 123 ------------~~e~~----~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (427)
++++. ..+...++++||||+.|+..... .++...+.+.+..+............++..+
T Consensus 81 wl~~~~~~~~~~~~~~~~~~~~~~~~e~l~~GvTtv~d~~~~~~-----~~~a~~~~Gir~~~~~~~~~~~~~~~~~~~~ 155 (427)
T 3v7p_A 81 WLYSVIRHREDLLPLCDGACLEQTLSSIIQTGTTAIGAISSYGE-----DLQACIDSALKVVYFNEVIGSNAATADVMYA 155 (427)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHTTEEEEEEEESSST-----THHHHHHBSSEEEEEEEECBCCGGGHHHHHH
T ss_pred HHHHHHHhHHhcCHHHHHHHHHHHHHHHHHhCCEEEEEecCcHH-----HHHHHHhcCCeEEEeccccCCChhhhhHHHH
Confidence 01111 22334579999999999864422 1345555555543332221111111112222
Q ss_pred HHHHHHH---HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHH-------HHHHcCCCC
Q 014320 187 EMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQK-------RMIELGITG 255 (427)
Q Consensus 187 ~~~~l~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~-------~l~~~G~~~ 255 (427)
+..+..+ ..+...++..+++++++.++++.++.+++.|+++|+++++|+ |+..++..+.+ .+.+.|...
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~E~~~e~~~~~~~~g~~~~~~~~~~~~~ 235 (427)
T 3v7p_A 156 SFLERFHQSKKHENERFKAAVAIHSPYSVHYILAKRALDIAKKYGSLVSVHFMESRAEREWLDKGSGEFAKFFKEFLNQT 235 (427)
T ss_dssp HHHHHHHHHHTTCBTTEEEEEEECCTTTBCHHHHHHHHHHHHHHTCCEEEEESCSHHHHHHHHHSCSHHHHHHHHHTCCC
T ss_pred HHHHHHHHhhhccCCceEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHhcCcchhhhhhhccCC
Confidence 2222221 122456788888999999999999999999999999999996 77766654432 122333210
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHh-cCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccC
Q 014320 256 PEGHALSRPPLLEGEATTRAIRLAEF-VNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTA 334 (427)
Q Consensus 256 ~~~~~~~~p~~~e~~a~~~~~~~~~~-~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~ 334 (427)
+|.. ...+.... .+.++.+.|+...+. +.++.+++.|+.+. .||.......
T Consensus 236 -------~~~~-------~~~~~l~~~~~~~~~~~H~~~~~~-~~~~~l~~~g~~~~--~~p~s~~~~~----------- 287 (427)
T 3v7p_A 236 -------RPVN-------DTKSFLELFKELHTLFVHMVWANE-EEIQTIASYNAHII--HCPISNRLLG----------- 287 (427)
T ss_dssp -------SCSS-------CHHHHHHTTTTSEEEEEECTTCCH-HHHHHHHHSEEEEE--ECHHHHHHTT-----------
T ss_pred -------Cccc-------CHHHHHhhhcCCCEEEEECCCCCH-HHHHHHHHcCCEEE--ECHHHHHHhc-----------
Confidence 1111 01111112 466788999987664 66788888885554 5876432111
Q ss_pred ceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHH
Q 014320 335 AKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTD 414 (427)
Q Consensus 335 ~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~ 414 (427)
. ..+|++. + .|+.+++|||+.+.+...+.. .+.+....+.. .....+++++
T Consensus 288 ~---~~~~~~~---------~--~Gv~v~lgtD~~~~~~~~~~~--------------~~~~~a~~~~~-~~~~~~~~~~ 338 (427)
T 3v7p_A 288 N---GVLDLEK---------I--KSIPYAIATDGLSSNYSLNMY--------------EELKAALFVHP-NKEATTFAKE 338 (427)
T ss_dssp C---CCCCTTT---------T--TTSCEEECCCCTTSCSCCCHH--------------HHHHHHHHHST-TSCHHHHHHH
T ss_pred C---CCCCHHH---------H--CCCeEEEeCCCCCCCCCCCHH--------------HHHHHHHHhcc-CCCcccCHHH
Confidence 1 1366665 3 899999999974433221110 13333333211 1112366799
Q ss_pred HHHHHchhhhcC
Q 014320 415 YVRLTSTEWGRL 426 (427)
Q Consensus 415 ~v~~~t~npA~~ 426 (427)
+++++|.|||++
T Consensus 339 ~~~~~t~~~a~~ 350 (427)
T 3v7p_A 339 LIIRATKAGYDA 350 (427)
T ss_dssp HHHHHTHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999974
No 46
>1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A*
Probab=99.94 E-value=1.3e-25 Score=219.68 Aligned_cols=306 Identities=20% Similarity=0.220 Sum_probs=177.6
Q ss_pred ccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCC--CCCceEEeCCCCEEeccccccccccccCcCCCC-C--hhhH
Q 014320 53 SKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV--GDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSE-T--IDDF 127 (427)
Q Consensus 53 ~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~--~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~-~--~e~~ 127 (427)
..++|+|++|++++....++|+|+||||++||+.... +++.++||++|++|+|||||+|+|+... +.. . ..+.
T Consensus 8 ~~~~i~n~~v~~~~~~~~~~v~i~~g~I~~ig~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~--~~~~~~~~~~~ 85 (390)
T 1onw_A 8 GFTLLQGAHLYAPEDRGICDVLVANGKIIAVASNIPSDIVPNCTVVDLSGQILCPGFIDQHVHLIGG--GGEAGPTTRTP 85 (390)
T ss_dssp CCEEEESCEEESSSEEEECEEEEETTEEEEEETTCCTTSSSSCEEEECTTCEEEECEEEEEECTTCC--BCTTSGGGBCC
T ss_pred ceEEEECcEEECCCCCccceEEEECCEEEEEecCcccCCCCCCeEEeCCCCEECcCeeEeeECcccc--CccccccccCH
Confidence 4689999999998766678999999999999975432 2346899999999999999999998643 111 0 0111
Q ss_pred HHHHHHHHcCCceEEecCcCCCCC--cH---HHHHHHHHHHhccccceeceec-cccCCChhhHHHHHHHHHHcCCCeEE
Q 014320 128 FSGQAAALAGGTTMHIDFVIPING--SL---TAGFEAYEKKAKNSCMDYGFHM-AITKWDEVVSDEMEVMVKEKGINSFK 201 (427)
Q Consensus 128 ~~~~~~~l~~GvTtv~d~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~g~~~ik 201 (427)
....+.++++||||++|+...... .. ....+...+.+.+.....+.+. ............+. +. ....+++
T Consensus 86 ~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~-~~--~~~~g~~ 162 (390)
T 1onw_A 86 EVALSRLTEAGVTSVVGLLGTDSISRHPESLLAKTRALNEEGISAWMLTGAYHVPSRTITGSVEKDVA-II--DRVIGVK 162 (390)
T ss_dssp CCCHHHHHHTTEEEEEECCCSCCSSCCHHHHHHHHHHHHHHTSEEEEEEECSCSSCCCSSSCHHHHHH-HC--TTEEEEE
T ss_pred HHHHHHHHHCCeeEEecCCCcccccCcHHHHHHHHHHHHhcCCceEEeccccCCCchhhhhhhcchhh-hH--HHhhcce
Confidence 123577899999999998644221 11 2223333333322211111110 00011111111111 11 1122347
Q ss_pred EEEecCCCccCCHHHHHHHHHHHHHcCC------cEEEec-CChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHH
Q 014320 202 FFMAYKGSFMINDELLIEGFKRCKSLGA------LAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTR 274 (427)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~a~~~g~------~v~~H~-e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~ 274 (427)
+.+.++..+..+.++++++++.+++.+. .+++|. ++...++...+
T Consensus 163 ~~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~g~~~~h~~~~~~~~~~~~~---------------------------- 214 (390)
T 1onw_A 163 CAISDHRSAAPDVYHLANMAAESRVGGLLGGKPGVTVFHMGDSKKALQPIYD---------------------------- 214 (390)
T ss_dssp EEESSTTSCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEEECSCTTTTHHHHH----------------------------
T ss_pred eeecCCCCCCCCHHHHHHHHHHHhhhhhhhccCceEEEEeCCCHHHHHHHHH----------------------------
Confidence 7777766667889999999888876543 367886 44443332221
Q ss_pred HHHHHHhcCCCE---EEEcCCCHHHH--HHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccH
Q 014320 275 AIRLAEFVNTPL---YVVHVMSMDAM--EEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHN 349 (427)
Q Consensus 275 ~~~~~~~~g~~~---~i~H~~~~~~~--~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~ 349 (427)
+.+..+.++ ...|+.....+ +.++.+++.|. +.. .++ .+|+ ..++
T Consensus 215 ---~~~~g~~~v~~l~~~h~~~~~~~~~~~~~~~~~~~~-~~~-~~~----------------------~~~~---~~~~ 264 (390)
T 1onw_A 215 ---LLENCDVPISKLLPTHVNRNVPLFEQALEFARKGGT-IDI-TSS----------------------IDEP---VAPA 264 (390)
T ss_dssp ---HHHTCCCCGGGEEEECGGGSHHHHHHHHHHHHTTCC-EEE-ETT----------------------CCSS---SCHH
T ss_pred ---HHhccCCceEEeeccccccCHHHHHHHHHHHhcCCc-ccc-ccc----------------------cCCC---CcCH
Confidence 112222222 22455332221 44555555442 111 121 1244 2467
Q ss_pred HHHHHHHhcCC-c--eEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 350 KALQAALATGI-L--QLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 350 ~~l~~~l~~G~-~--~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+.+|++++.|+ + ++++|||.|..+.... +....+.|+++.++.++.++ .+++..+++++++++++|.||||+
T Consensus 265 ~~l~~~~~~g~~~d~i~l~TD~~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~t~npA~~ 339 (390)
T 1onw_A 265 EGIARAVQAGIPLARVTLSSDGNGSQPFFDD----EGNLTHIGVAGFETLLETVQ-VLVKDYDFSISDALRPLTSSVAGF 339 (390)
T ss_dssp HHHHHHHHTTCCGGGEEEECCBTCC-----------------CCCCSHHHHHHHH-HHHHHHCCCHHHHHGGGTHHHHHH
T ss_pred HHHHHHHHcCCCccceEEEccCCCCCcccCC----ccccccccCCCHHHHHHHHH-HHHHHcCCCHHHHHHHHhHHHHHH
Confidence 88999999998 4 5999999765331110 11124568888888888876 566667899999999999999985
No 47
>2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A*
Probab=99.93 E-value=6.5e-25 Score=216.51 Aligned_cols=294 Identities=15% Similarity=0.082 Sum_probs=174.0
Q ss_pred ccEEEECcEEEcCCC-------ceeeeEEEeCCeEEEeeCCCCCCC--CceEEeCCCCEEeccccccccccccCcCC---
Q 014320 53 SKILIKGGTVVNAHH-------QQIADVYVEDGIVVAVQPNINVGD--DVKVLDATGKFVMPGGIDPHTHLAMEFMG--- 120 (427)
Q Consensus 53 ~~~~i~~~~i~~~~~-------~~~~~i~i~~g~I~~vg~~~~~~~--~~~viD~~g~~v~PG~ID~H~H~~~~~~g--- 120 (427)
++++|+|++|++++. ..+++|+|+||||++||+..+.+. +.++||++|++|+|||||+|+|+......
T Consensus 5 ~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~~~~ 84 (416)
T 2q09_A 5 CERVWLNVTPATLRSDLADYGLLEPHALGVHEGRIHALVPMQDLKGPYPAHWQDMKGKLVTPGLIDCHTHLIFAGSRAEE 84 (416)
T ss_dssp CSEEEEEEEEBCCCTTSSTTCBCSSEEEEEETTEEEEEEEGGGCC--CCTTSEECTTCEEEECEEEEEECCCCCSCCHHH
T ss_pred ccEEEEcCeEeccCcccccccccccceEEEECCEEEEEcChhhccccCCCeEEeCCCCEECCcccccccCcchhhhhHHH
Confidence 468999999998664 247899999999999998644333 45799999999999999999998764110
Q ss_pred ----------------------------CCChhhHHHH----HHHHHcCCceEEecCcCCCCC--cHHHHHHHHHHHhcc
Q 014320 121 ----------------------------SETIDDFFSG----QAAALAGGTTMHIDFVIPING--SLTAGFEAYEKKAKN 166 (427)
Q Consensus 121 ----------------------------~~~~e~~~~~----~~~~l~~GvTtv~d~~~~~~~--~~~~~~~~~~~~~~~ 166 (427)
..+++++... .+.++++||||+.|+...... .....++.+.+...+
T Consensus 85 ~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (416)
T 2q09_A 85 FELRQKGVPYAEIARKGGGIISTVRATRAASEDQLFELALPRVKSLIREGVTTVEIKSGYGLTLEDELKMLRVARRLGEA 164 (416)
T ss_dssp HHHHHTTCCHHHHHHTTCTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHTEEEEEEECCSCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCHHHhhhcCCcEeehhhhccCCCHHHHHHHHHHHHHHHHHcCCcEEEeccCcccChHhHHHHHHHHHHHHhh
Confidence 0123333332 366799999999996432211 122334444443322
Q ss_pred ccceec--eec--ccc-C---CChhhHHHHH-HHHH---HcC-CCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEE
Q 014320 167 SCMDYG--FHM--AIT-K---WDEVVSDEME-VMVK---EKG-INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMV 233 (427)
Q Consensus 167 ~~~~~~--~~~--~~~-~---~~~~~~~~~~-~l~~---~~g-~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~ 233 (427)
..+.+. +.+ ... . ..++.++... ++.+ ..+ ++.++.+. +...++++.++++++.|++.|+++++
T Consensus 165 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~g~~v~~ 241 (416)
T 2q09_A 165 LPIRVKTTLLAAHAVPPEYRDDPDSWVETICQEIIPAAAEAGLADAVDVFC---EHIGFSLAQTEQVYLAADQYGLAVKG 241 (416)
T ss_dssp SSSEEEEEEEEETSCCGGGTTCHHHHHHHHHHTHHHHHHHTTCCSEEEEBB---STTSBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCceEEEeeeccccCCccccCCHHHHHHHHHhhhhHHHHhccccccccccc---CCCcCCHHHHHHHHHHHHHCCCcEEE
Confidence 111111 110 000 0 0112222211 1111 233 44555432 23456899999999999999999999
Q ss_pred ecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEe
Q 014320 234 HAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGE 313 (427)
Q Consensus 234 H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~ 313 (427)
|+....... .+ +.+.+.|. ..+.|+..... +.++++++.|+.++
T Consensus 242 H~~~~~~~~----------------------------~~----~~~~~~g~-~~~~H~~~~~~-~~~~~~~~~g~~~~-- 285 (416)
T 2q09_A 242 HMDQLSNLG----------------------------GS----TLAANFGA-LSVDHLEYLDP-EGIQALAHRGVVAT-- 285 (416)
T ss_dssp EESSSCCCS----------------------------HH----HHHHHTTC-SEEEECTTCCH-HHHHHHHHHTCEEE--
T ss_pred EECCCCchH----------------------------HH----HHHHHcCC-CEEeecccCCH-HHHHHHHHcCCeEE--
Confidence 985432110 00 11112333 23677765543 66788888886554
Q ss_pred cCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchh
Q 014320 314 PVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGI 393 (427)
Q Consensus 314 ~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~ 393 (427)
.||.+.+.... ...+| ++++++.|+++++|||+.|+.... ..
T Consensus 286 ~~p~~~~~~~~-------------~~~~~---------~~~~~~~Gv~~~~gtD~~~~~~~~---------------~~- 327 (416)
T 2q09_A 286 LLPTAFYFLKE-------------TKLPP---------VVALRKAGVPMAVSSDINPGTAPI---------------VS- 327 (416)
T ss_dssp ECHHHHHHTTC-------------CCCCC---------HHHHHHTTCCEEECCCCBTTTBCC---------------CC-
T ss_pred EcCccHHhhcc-------------ccccC---------HHHHHHCCCeEEEecCCCCccCCC---------------CC-
Confidence 57765432100 01234 466899999999999986532100 00
Q ss_pred hHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 394 EERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 394 e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
.+..+. ..+...++|++++++++|.|||++
T Consensus 328 --~~~~~~-~~~~~~~l~~~~al~~~T~~~A~~ 357 (416)
T 2q09_A 328 --LRMAMN-MACTLFGLTPVEAMAGVTRHAARA 357 (416)
T ss_dssp --HHHHHH-HHHHHHCCCHHHHHHHTTHHHHHH
T ss_pred --HHHHHH-HHHHHcCCCHHHHHHHHHHHHHHH
Confidence 111111 233445799999999999999974
No 48
>2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A
Probab=99.93 E-value=5.5e-24 Score=209.98 Aligned_cols=294 Identities=16% Similarity=0.130 Sum_probs=170.8
Q ss_pred CccEEEECcEEEcCCC-------ceeeeEEEeCCeEEEeeCCCCCCC----CceEEeCCCCEEeccccccccccccCcC-
Q 014320 52 SSKILIKGGTVVNAHH-------QQIADVYVEDGIVVAVQPNINVGD----DVKVLDATGKFVMPGGIDPHTHLAMEFM- 119 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~-------~~~~~i~i~~g~I~~vg~~~~~~~----~~~viD~~g~~v~PG~ID~H~H~~~~~~- 119 (427)
+.+++|+|+++++++. ..+++|+|+||||++||+..+.+. +.++||++|++|+|||||+|+|+.....
T Consensus 14 ~~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~ 93 (419)
T 2puz_A 14 NATALWRNAQLATLNPAMDGIGAVENAVIAVRNGRIAFAGPESDLPDDLSTADETTDCGGRWITPALIDCHTHLVFGGNR 93 (419)
T ss_dssp -CEEEEEEEEEECCCTTSSTTCEEEEEEEEEETTEEEEEEETTSCCGGGSCCSEEEECTTCEEEECEEECCCCCCCSSCC
T ss_pred CCcEEEECCeEeccCcccccCCcccceEEEEECCEEEEEcChhhhhhhccCCCeEEeCCCCEeCcCceecccCccchhhh
Confidence 4679999999998654 257899999999999998654332 2589999999999999999999865310
Q ss_pred ---------CC---------------------CChhhHHH----HHHHHHcCCceEEecCcCCCCC--cHHHHHHHHHHH
Q 014320 120 ---------GS---------------------ETIDDFFS----GQAAALAGGTTMHIDFVIPING--SLTAGFEAYEKK 163 (427)
Q Consensus 120 ---------g~---------------------~~~e~~~~----~~~~~l~~GvTtv~d~~~~~~~--~~~~~~~~~~~~ 163 (427)
+. .+++.+.. ..+.+++.|||++.|+...... .....++.+++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~ 173 (419)
T 2puz_A 94 AMEFEMRLNGATYEEIAKAGGGIVSSVRDTRALSDEVLVAQALPRLDTLLSEGVSTIEIKSGYGLDIETELKMLRVARRL 173 (419)
T ss_dssp HHHHHHHHTTCCHHHHHHTTCSHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTEEEEEEECCSCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHhcCCCeecchhhhccCCHHHHHHHHHHHHHHHHhcCCeEEEeCCCCCCCchhHHHHHHHHHHH
Confidence 00 12222222 2366789999999985322211 122344444444
Q ss_pred hccccceec--e---eccccCC---ChhhHHH-----HHHHHHHc-CCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCC
Q 014320 164 AKNSCMDYG--F---HMAITKW---DEVVSDE-----MEVMVKEK-GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGA 229 (427)
Q Consensus 164 ~~~~~~~~~--~---~~~~~~~---~~~~~~~-----~~~l~~~~-g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~ 229 (427)
.....+.+. + +...... .++..+. +..+. .. ....++.+.. ...++.+.++++++.|+++|+
T Consensus 174 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~g~ 249 (419)
T 2puz_A 174 ETLRPVRIVTSYLAAHATPADYKGRNADYITDVVLPGLEKAH-AEGLADAVDGFCE---GIAFSVKEIDRVFAAAQQRGL 249 (419)
T ss_dssp TTTSSCEEEEEECCTTCCCGGGTTCHHHHHHHTHHHHHHHHH-HTTCCSEECCEES---TTSBCHHHHHHHHHHHHHTTC
T ss_pred hhhcCceEEEEecccccCchhhcccHHHHHHHHHhhhhhhhh-hcccccccccccC---CCCcCHHHHHHHHHHHHHCCC
Confidence 332222111 1 1100000 1111221 11111 22 2344443322 234688999999999999999
Q ss_pred cEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCC
Q 014320 230 LAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQR 309 (427)
Q Consensus 230 ~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~ 309 (427)
++++|+....... .+ +.+.+.+. ..+.|+...+. +.++++++.|+.
T Consensus 250 ~v~~H~~~~~~~~----------------------------~~----~~~~~~g~-~~~~H~~~~~~-~~~~~~~~~g~~ 295 (419)
T 2puz_A 250 PVKLHAEQLSNLG----------------------------GA----ELAASYNA-LSADHLEYLDE-TGAKALAKAGTV 295 (419)
T ss_dssp CBEEEESSSSCCS----------------------------HH----HHHHHTTC-SEEEECTTCCH-HHHHHHHHHTCE
T ss_pred cEEEEecccccCC----------------------------HH----HHHHhcCC-ceehHhccCCH-HHHHHHHHcCCc
Confidence 9999974321100 00 11112333 34778877654 667888888875
Q ss_pred EEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCC
Q 014320 310 VIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNG 389 (427)
Q Consensus 310 v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G 389 (427)
+. .||.+.+.. .. . ..+| ++.+++.|+++++|||+.|.....
T Consensus 296 ~~--~~p~~~~~l----~~------~---~~~~---------~~~~~~~Gv~~~lgsD~~~~~~~~-------------- 337 (419)
T 2puz_A 296 AV--LLPGAFYAL----RE------K---QLPP---------VQALRDAGAEIALATDCNPGTSPL-------------- 337 (419)
T ss_dssp EE--ECHHHHHHH----TC------C---CCCC---------HHHHHHHTCCEEECCCCCSSSCCB--------------
T ss_pred EE--ECCchhhhh----cc------c---cccc---------HHHHHHCCCeEEEECCCCCCCCcc--------------
Confidence 54 466432210 00 0 1233 455788899999999986542100
Q ss_pred CchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 390 VNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 390 ~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
. .+...+...+...++|++++++++|.|||+.
T Consensus 338 -~----~l~~~~~~~~~~~~ls~~~al~~~T~~~A~~ 369 (419)
T 2puz_A 338 -T----SLLLTMNMGATLFRMTVEECLTATTRNAAKA 369 (419)
T ss_dssp -C----CHHHHHHHHHHHHCCCHHHHHHHTTHHHHHH
T ss_pred -c----cHHHHHHHhccccCCCHHHHHHHHHHHHHHH
Confidence 0 1111111223345799999999999999974
No 49
>2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis}
Probab=99.93 E-value=2.8e-26 Score=224.79 Aligned_cols=183 Identities=15% Similarity=0.160 Sum_probs=116.8
Q ss_pred CccEEEECcEEEcCCCc-eeeeEEEeCCeEEEeeCCCCCCCCceEEeCC-CCEEeccccccccccccCc-CCCCChhhHH
Q 014320 52 SSKILIKGGTVVNAHHQ-QIADVYVEDGIVVAVQPNINVGDDVKVLDAT-GKFVMPGGIDPHTHLAMEF-MGSETIDDFF 128 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~~-~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~-g~~v~PG~ID~H~H~~~~~-~g~~~~e~~~ 128 (427)
..+++|+|++|++++.. .+++|+|+||||++|++..+..++.++||++ |++|+|||||+|+|+.++. .+..++++++
T Consensus 2 ~~~~li~~~~v~~~~~~~~~~~v~I~~g~I~~ig~~~~~~~~~~viD~~~g~~v~PGlID~H~H~~~~~~~~~~~~e~~~ 81 (396)
T 2vhl_A 2 AESLLIKDIAIVTENEVIKNGYVGINDGKISTVSTERPKEPYSKEIQAPADSVLLPGMIDIHIHGGYGADTMDASFSTLD 81 (396)
T ss_dssp -CCEEEEEEEEECSSCEEEEEEEEEETTEEEEEESSCCSSCCSEEEECCTTCEEEECEEEEEECEETTEEGGGCSHHHHH
T ss_pred CccEEEEeeEEEcCCccccCceEEEECCEEEEEECCCCCCCCCceEcCCCCCEEcCCEEEEeecCCcCccccCCCHHHHH
Confidence 45789999999998763 5789999999999999321111345899999 9999999999999997641 1234678888
Q ss_pred HHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhcc------ccceeceec--ccc-------C----CChhhHHHH
Q 014320 129 SGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKN------SCMDYGFHM--AIT-------K----WDEVVSDEM 188 (427)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~------~~~~~~~~~--~~~-------~----~~~~~~~~~ 188 (427)
..+++++++||||++|+....+. .....++...+...+ ....++++. +.. . ......+.+
T Consensus 82 ~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 161 (396)
T 2vhl_A 82 IMSSRLPEEGTTSFLATTITQEHGNISQALVNAREWKAAEESSLLGAELLGIHLEGPFVSPKRAGAQPKEWIRPSDVELF 161 (396)
T ss_dssp HHHHHGGGGTEEEEEEECCSCCHHHHHHHHHHHHHHHHHCSGGGSSSEEEEEEEECSSSCGGGCTTSCGGGCCCCCHHHH
T ss_pred HHHHHHHcCCeeEEEecccCCCHHHHHHHHHHHHHHHhcccccccccceEEEeeecCccCccccCCCCHHHccCCCHHHH
Confidence 88999999999999998643222 122234444443321 111222221 110 0 001124456
Q ss_pred HHHHHHcCCCeEEEE-EecCCCccCCHHHHHHHHHHHHHcCCcEEE-ecC-ChhhH
Q 014320 189 EVMVKEKGINSFKFF-MAYKGSFMINDELLIEGFKRCKSLGALAMV-HAE-NGDAV 241 (427)
Q Consensus 189 ~~l~~~~g~~~ik~~-~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~-H~e-~~~~~ 241 (427)
+++. +.+.+.+|++ +.+... .+.++++.|+++|+++++ |+. +...+
T Consensus 162 ~~~~-~~~~~~ik~~~~~p~~~------~~~~~~~~a~~~g~~v~~gH~~~~~~~~ 210 (396)
T 2vhl_A 162 KKWQ-QEAGGLIKIVTLAPEED------QHFELIRHLKDESIIASMGHTDADSALL 210 (396)
T ss_dssp HHHH-HHTTTCEEEEEECGGGS------GGGHHHHHHHHTTCEEEECSBCCCHHHH
T ss_pred HHHH-HhcCCcceEEEECCCCC------CHHHHHHHHHHCCCEEeecccCCCHHHH
Confidence 6665 4566677754 333221 123677889999999998 974 55433
No 50
>4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus}
Probab=99.92 E-value=1.3e-24 Score=217.18 Aligned_cols=305 Identities=14% Similarity=-0.000 Sum_probs=184.7
Q ss_pred CccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcC-CC---------
Q 014320 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS--------- 121 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g~--------- 121 (427)
|.+++++|+.+.+ ...++++|+|+||||++||+..+ .++||++|++|+|||||+|+|+.++.. |.
T Consensus 11 m~~l~~~~~~~~~-~~~~~~~v~I~~g~I~~Ig~~~~----~~~iD~~g~~v~PGlID~H~H~~~~~~rg~~~~~~~~~~ 85 (458)
T 4f0l_A 11 QHFIHARQALLPD-GWAENVRIGIAGGVICSIETGVL----AGPDDERQSVVVAGMANLHSHAFQYGMAGLAERRGPSAD 85 (458)
T ss_dssp CEEEEEEEEEETT-EEEEEEEEEEETTEEEEEECSCC----CCTTCEEEEEEEECEEEEEECGGGGGGTTSSCBCCSCSS
T ss_pred hhHhhhcceeccC-ccccCceEEEECCEEEEEeCCCc----cccccCCCCEEccCceecccchhhhhhcccccccccCCC
Confidence 4567777776632 22568999999999999998643 346899999999999999999964421 10
Q ss_pred ---------------CChhhHHHH----HHHHHcCCceEEecCcCCCC-------Cc----HHHHHHHHHHHhcccccee
Q 014320 122 ---------------ETIDDFFSG----QAAALAGGTTMHIDFVIPIN-------GS----LTAGFEAYEKKAKNSCMDY 171 (427)
Q Consensus 122 ---------------~~~e~~~~~----~~~~l~~GvTtv~d~~~~~~-------~~----~~~~~~~~~~~~~~~~~~~ 171 (427)
.++++++.. ...++++||||+.|+..... .. ....++...+.+.+..+..
T Consensus 86 ~~~~w~~~~~~~~~~~~~e~~~~~~~~~~~e~l~~GvTtv~d~~~~~~~~~g~~~~~~~~~~~~~~~a~~~~g~r~~~~~ 165 (458)
T 4f0l_A 86 SFWSWREIMYKFALTMTPEQAEAVALRLYVDMLEAGFTRVGEFHYLHHDCDGTPYANLSEMADRIAAAATTAGMGLTLLP 165 (458)
T ss_dssp TTHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTTEEEEEEEECCCSCTTSCCCSSTTHHHHHHHHHHHHHTCEEEEEE
T ss_pred cHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHhcCCcEEEeeeeeccccccccccchhhhHHHHHHHHHHcCCeEEEec
Confidence 123344333 33468899999999632110 01 2344555566665543322
Q ss_pred ceec-----cc---------cCCChhhHHHHHHHHHH-cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-
Q 014320 172 GFHM-----AI---------TKWDEVVSDEMEVMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA- 235 (427)
Q Consensus 172 ~~~~-----~~---------~~~~~~~~~~~~~l~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~- 235 (427)
.+.. .. ....++..+.++++.+. .+...+++.+.+++.+.++++.++.+++.|+ |+++++|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~--g~~v~~H~~ 243 (458)
T 4f0l_A 166 VFYAHSGFGGAAANEGQRRFINDPERFARLIEGCRKTLEGFEGAVLGVAPHSLRAVTPDELDSVTQLLP--DAPVHIHVA 243 (458)
T ss_dssp EECCEEETTTEECCGGGTTTCCCHHHHHHHHHHHHHHHTTCTTCEECBEECBTTTSCHHHHHHHTTSST--TSCEEEEES
T ss_pred chhccccccccCCchhhhhhhcCHHHHHHHHHHHHHHhccCCceEEEEecCCcCcCCHHHHHHHHHHhc--CCCEEEEeC
Confidence 1110 00 01112233333433321 2334566667788888899999999999998 99999996
Q ss_pred CChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecC
Q 014320 236 ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPV 315 (427)
Q Consensus 236 e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~ 315 (427)
|+..++..+.+.+ |.. .+. .+......+.+..+.|+...+. +.++.+++.|+.+.. |
T Consensus 244 e~~~~~~~~~~~~---g~~----------------~~~-~l~~~g~l~~~~~~~H~~~~~~-~~~~~l~~~g~~~~~--~ 300 (458)
T 4f0l_A 244 EQVKEVEDCIAWS---GKR----------------PVE-WLLDHQDVTARWCLIHATHMSD-EETKHMAKAGAIAGL--C 300 (458)
T ss_dssp CSHHHHHHHHHHH---SSC----------------HHH-HHHHHSCCCTTEEEEECCSCCH-HHHHHHHHHTCEEEE--C
T ss_pred CCHHHHHHHHHHh---CCC----------------HHH-HHHHcCCCCCCeEEEEeccCCH-HHHHHHHHcCCeEEE--C
Confidence 6777665554322 210 011 1111222456778889876654 567788888876665 7
Q ss_pred ccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhH
Q 014320 316 VSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEE 395 (427)
Q Consensus 316 p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~ 395 (427)
|...... +.. .+| ++++++.|+.+++|||..+.... -.+.
T Consensus 301 p~s~~~l-----------~~~---~~~---------~~~~~~~Gv~v~lgtD~~~~~~~-----------------~~~~ 340 (458)
T 4f0l_A 301 PVTEANL-----------GDG---TFN---------ATEFAAAGGKFGIGSDSNVLIGI-----------------GDEL 340 (458)
T ss_dssp HHHHHHT-----------TCC---CCC---------HHHHHHTTCEEEECCBTTSSCCH-----------------HHHH
T ss_pred ccccccc-----------cCC---Ccc---------HHHHHHCCCeEEEECCCCCCCCH-----------------HHHH
Confidence 7532111 111 133 56688999999999994221110 1133
Q ss_pred hHHHHHHHHHh--------cCCCCHHHHHHHHchhhhcC
Q 014320 396 RMHLVWDTMVE--------SGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 396 ~l~~~~~~~~~--------~~~l~l~~~v~~~t~npA~~ 426 (427)
+....+..... ...++++++++++|.|||+.
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~~A~~ 379 (458)
T 4f0l_A 341 RQLEYSQRLYHRARNVLAANEGSTGRALFDGAVLGGNIA 379 (458)
T ss_dssp HHHHHHHHHHHTCSSCSCSTTSBHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhccCccccCCcccCCHHHHHHHHHHHHHHH
Confidence 44443333322 13599999999999999974
No 51
>2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A
Probab=99.92 E-value=8.7e-24 Score=208.71 Aligned_cols=292 Identities=16% Similarity=0.159 Sum_probs=170.4
Q ss_pred ccEEEEC-cEEEcCCC--------------ceeeeEEEeCCeEEEeeCCC-C--CCCCceEEeCCCCEEecccccccccc
Q 014320 53 SKILIKG-GTVVNAHH--------------QQIADVYVEDGIVVAVQPNI-N--VGDDVKVLDATGKFVMPGGIDPHTHL 114 (427)
Q Consensus 53 ~~~~i~~-~~i~~~~~--------------~~~~~i~i~~g~I~~vg~~~-~--~~~~~~viD~~g~~v~PG~ID~H~H~ 114 (427)
.+++|+| ++|++++. ..+++|+|+||||++||+.. . .+ ..++||++|++|+|||||+|+|+
T Consensus 5 ~d~li~n~g~I~t~~~~~~~~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~-~~~viD~~G~~v~PGfID~H~H~ 83 (421)
T 2bb0_A 5 IDTILINIGQLLTMESSGPRAGKSMQDLHVIEDAVVGIHEQKIVFAGQKGAEAGYE-ADEIIDCSGRLVTPGLVDPHTHL 83 (421)
T ss_dssp EEEEEEEEEEECCCCCSSCCCGGGGTCCCCEEEEEEEEETTEEEEEEETTTTTTCE-EEEEEECTTCEEEECEEECCBCC
T ss_pred ccEEEECCcEEEecCCCccccccccccccccccceEEEECCEEEEEecccccccCC-CCeEEeCCCCEeccCeeccCcCc
Confidence 4789999 99998653 24789999999999999754 2 22 35799999999999999999998
Q ss_pred ccCcC----------C---------------------CCChhhHHHH----HHHHHcCCceEEecCcCCCCC--cHHHHH
Q 014320 115 AMEFM----------G---------------------SETIDDFFSG----QAAALAGGTTMHIDFVIPING--SLTAGF 157 (427)
Q Consensus 115 ~~~~~----------g---------------------~~~~e~~~~~----~~~~l~~GvTtv~d~~~~~~~--~~~~~~ 157 (427)
..... + ..+++.+... .+.+++.||||+.|+...... .....+
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~gggi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~ 163 (421)
T 2bb0_A 84 VFGGSREKEMNLKLQGISYLDILAQGGGILSTVKDTRAASEEELLQKAHFHLQRMLSYGTTTAEVKSGYGLEKETELKQL 163 (421)
T ss_dssp CCCSCCGGGHHHHHTTCCHHHHHHTTCTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTEEEEEEECCSCCSHHHHHHHH
T ss_pred cccccchHHHHHHHhCCCHHHHhhcCCCcccchhhhhcCCHHHHHHHHHHHHHHHHhcCceEEEeccccCcCccchHHHH
Confidence 65410 0 0122222222 366789999999985322211 112334
Q ss_pred HHHHHHhccccceec--e---eccccCC---ChhhHHHHHHHHH---Hc-CCCeEEEEEecCCCccCCHHHHHHHHHHHH
Q 014320 158 EAYEKKAKNSCMDYG--F---HMAITKW---DEVVSDEMEVMVK---EK-GINSFKFFMAYKGSFMINDELLIEGFKRCK 225 (427)
Q Consensus 158 ~~~~~~~~~~~~~~~--~---~~~~~~~---~~~~~~~~~~l~~---~~-g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~ 225 (427)
+.+++......+.+. + +...... .++..+.+.++.+ .. ....++.+. +...++.++++++++.|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~e~l~~~~~~a~ 240 (421)
T 2bb0_A 164 RVAKKLHESQPVDLVSTFMGAHAIPPEYQNDPDDFLDQMLSLLPEIKEQELASFADIFT---ETGVFTVSQSRRYLQKAA 240 (421)
T ss_dssp HHHHHHHHHSSSEEEEEEEEESSCCGGGTTCHHHHHHHHHTTHHHHHHTTCCSEEEEBB---CTTSBCHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCceEEEEeeccccCChhhcccHHHHHHHHHHhhHHhhccCccccccccC---CcCCCCHHHHHHHHHHHH
Confidence 444443322111111 1 1100000 1112222211111 12 244454432 223468999999999999
Q ss_pred HcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhh
Q 014320 226 SLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARK 305 (427)
Q Consensus 226 ~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~ 305 (427)
++|+++++|+....... .+ +.+...+. ..+.|+...+. +.++++++
T Consensus 241 ~~g~~v~~H~~~~~~~~----------------------------~~----~~~~~~g~-~~~~H~~~~~~-~~i~~~~~ 286 (421)
T 2bb0_A 241 EAGFGLKIHADEIDPLG----------------------------GA----ELAGKLKA-VSADHLVGTSD-EGIKKLAE 286 (421)
T ss_dssp HTTCEEEEEECSSSCCS----------------------------HH----HHHHHTTC-SEEEECTTCCH-HHHHHHHH
T ss_pred HCCCCEEEEeccccccC----------------------------HH----HHHHHcCC-cEEhhhhcCCH-HHHHHHHH
Confidence 99999999974321100 00 11112332 34778876654 67888888
Q ss_pred cCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCC-ChhhhhcCCCCCc
Q 014320 306 AGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF-NSTQKAFGIDDFR 384 (427)
Q Consensus 306 ~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~-~~~~~~~~~~~~~ 384 (427)
.|+.++ .||.+.+... +.. .+| ++.+++.|+.+++|||+.|. ++..
T Consensus 287 ~g~~~~--~~p~~~~~l~----------~~~---~~~---------~~~~~~~Gv~v~lgtD~~~~~~~~~--------- 333 (421)
T 2bb0_A 287 AGTIAV--LLPGTTFYLG----------KST---YAR---------ARAMIDEGVCVSLATDFNPGSSPTE--------- 333 (421)
T ss_dssp HTCEEE--ECHHHHHHTT----------CCC---CCC---------HHHHHHTTCCEEECCCBBTTTBCCC---------
T ss_pred cCCeEE--ECCchhhhhc----------ccc---cch---------HHHHHHCCCeEEEeCCCCCCCCccc---------
Confidence 887554 4775432110 001 123 56689999999999997552 1110
Q ss_pred cCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 385 KIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 385 ~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
.+...+...+...++|++++++++|.|||+.
T Consensus 334 -----------~~~~~~~~~~~~~~ls~~eal~~~T~~~A~~ 364 (421)
T 2bb0_A 334 -----------NIQLIMSIAALHLKMTAEEIWHAVTVNAAYA 364 (421)
T ss_dssp -----------CHHHHHHHHHHHSCCCHHHHHHHTTHHHHHH
T ss_pred -----------CHHHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence 1111111233456899999999999999974
No 52
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=99.92 E-value=7.7e-24 Score=216.99 Aligned_cols=284 Identities=18% Similarity=0.129 Sum_probs=180.8
Q ss_pred CccEEEECcEEEcCCC--ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHH
Q 014320 52 SSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFS 129 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~--~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~ 129 (427)
+.+++|+|++|+++.. ...++|+|+||||++|++.....++.++||++|++|+|||||+|+|+..+ ..+++.+
T Consensus 34 ~~dlli~n~~ivd~~~~~~~~~dI~I~~G~I~~Vg~~~~~~~~~~vID~~G~~v~PG~ID~H~Hl~~~---~~~~~~~-- 108 (608)
T 3nqb_A 34 RFDVLITGGTLVDVVTGELRPADIGIVGALIASVHEPASRRDAAQVIDAGGAYVSPGLIDTHMHIESS---MITPAAY-- 108 (608)
T ss_dssp CEEEEEESCEEECTTTCCEEECEEEEETTEEEEEECTTSCCCEEEEEECTTSEEEECEEEEEECGGGG---TSCHHHH--
T ss_pred CCCEEEECeEEEECCCCeEEeeEEEEECCEEEEecCCCCCCCCCeEEeCCCCEEecCeEecccCcccc---cCCHHHH--
Confidence 5789999999999764 56789999999999999865334567899999999999999999999765 2344444
Q ss_pred HHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhccccceeceec-ccc--------CCChhhHHHHHHHHHHcCCCe
Q 014320 130 GQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHM-AIT--------KWDEVVSDEMEVMVKEKGINS 199 (427)
Q Consensus 130 ~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~~~~~~~~l~~~~g~~~ 199 (427)
.+.++.+||||++++...... ...+.++...+.+.+...++.+.. +.. .......++++++.++.++.+
T Consensus 109 -~~~al~~GvTtvv~~p~~~~~v~g~~~~~~~l~~a~~~~~~v~~~~p~~~P~~~~~~~~g~~~~~~el~~l~~~~~v~g 187 (608)
T 3nqb_A 109 -AAAVVARGVTTIVWDPHEFGNVHGVDGVRWAAKAIENLPLRAILLAPSCVPSAPGLERGGADFDAAILADLLSWPEIGG 187 (608)
T ss_dssp -HHHHHTTTEEEEEECCHHHHHHHTHHHHHHHHHHHTTCSSEEEEEECCCSSSSTTSCCCSCCCCHHHHHHHHTSTTEEE
T ss_pred -HHHHHhCCeEEEEcCCccccccCCHHHHHHHHHHhhhcCcEEEEeccccCCCCCccccCcccCCHHHHHHHHhccCcce
Confidence 678999999999976422111 123445555555544444433222 110 011123566777774567888
Q ss_pred EEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHH
Q 014320 200 FKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLA 279 (427)
Q Consensus 200 ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~ 279 (427)
++.++++.+. ..+++.+.+.++.|++.|+++.+|+.+.... . +...
T Consensus 188 lgE~~~~~~v-~~~d~~l~~~l~~A~~~g~pV~~Ha~~~~~~--~-------------------------------L~~~ 233 (608)
T 3nqb_A 188 IAEIMNMRGV-IERDPRMSGIVQAGLAAEKLVCGHARGLKNA--D-------------------------------LNAF 233 (608)
T ss_dssp EEEECCHHHH-HTTCHHHHHHHHHHHHHTCEEEECCTTCCHH--H-------------------------------HHHH
T ss_pred eeEeeccCCc-CCCcHHHHHHHHHHHHcCCEEEEcCCCCCHH--H-------------------------------HHHH
Confidence 8888865432 2456788999999999999999998653221 0 1111
Q ss_pred HhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHh--
Q 014320 280 EFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALA-- 357 (427)
Q Consensus 280 ~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~-- 357 (427)
...|.. .+|.+.... +.++.+ +.|..+... .. . ..+.+.+.+.++
T Consensus 234 ~~aGv~--~~H~~~~~e-ea~e~l-~~G~~i~i~-gs-------------~---------------~~~~~~l~~~i~~~ 280 (608)
T 3nqb_A 234 MAAGVS--SDHELVSGE-DLMAKL-RAGLTIELR-GS-------------H---------------DHLLPEFVAALNTL 280 (608)
T ss_dssp HHTTCC--EECCCCSHH-HHHHHH-HTTCEEEEE-SS-------------S---------------GGGHHHHHHHHHHH
T ss_pred HHcCCC--eeeccCCHH-HHHHHH-HCCCEEEEe-cc-------------c---------------cccHHHHHHHHHhH
Confidence 223444 378766542 444544 467665532 10 0 011233444444
Q ss_pred --cCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 358 --TGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 358 --~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
.|+.++++||+.+...... +..++..+...++. +++++++++++|.|||++
T Consensus 281 ~~~g~~v~lgTD~~~p~~~~~-----------------~g~l~~~v~~~~~~-Gls~~eal~~aT~n~A~~ 333 (608)
T 3nqb_A 281 GHLPQTVTLCTDDVFPDDLLQ-----------------GGGLDDVVRRLVRY-GLKPEWALRAATLNAAQR 333 (608)
T ss_dssp TSCCTTEEEECBSCCHHHHHH-----------------TCSHHHHHHHHHHT-TCCHHHHHHHHTHHHHHH
T ss_pred hhcCceEEEecCCCCCcchhh-----------------hcchHHHHHHHHHc-CCCHHHHHHHHHHHHHHH
Confidence 7999999999642111110 01234444334443 799999999999999974
No 53
>3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A*
Probab=99.92 E-value=3.8e-24 Score=213.34 Aligned_cols=299 Identities=14% Similarity=0.049 Sum_probs=183.1
Q ss_pred EECcEEEcCCC-ceeeeEEE-eCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCC--------------
Q 014320 57 IKGGTVVNAHH-QQIADVYV-EDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMG-------------- 120 (427)
Q Consensus 57 i~~~~i~~~~~-~~~~~i~i-~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g-------------- 120 (427)
+..++++.+++ .++++|+| +||||++||+..+. .+++|++| +|+|||||+|+|+.+....
T Consensus 4 ~~~~~~~~~~~~~~~~~v~i~~~g~I~~ig~~~~~---~~~~d~~g-~v~PGfId~H~H~~~~~~rg~~~~~~~~~~~l~ 79 (453)
T 3mdu_A 4 IFAERALLPEGWARNVRFEISADGVLAEIRPDANA---DGAERLGG-AVLPGMPNLHSHAFQRAMAGLAEVAGNPNDSFW 79 (453)
T ss_dssp EEEEEEEETTEEEEEEEEEECTTSBEEEEESSCCC---TTSEECSS-CEEECEEEEEECGGGGGGTTTTCCCSSTTCCHH
T ss_pred cchhheecCCceecCeEEEEecCCEEEEecCCCCc---ccccccCC-cccccceecccchHHHhhccccccccCCCCcHH
Confidence 44566676666 57899999 89999999986542 24579999 9999999999998654211
Q ss_pred -----------CCChhhHHHHH----HHHHcCCceEEecCcCCCC-------C----cHHHHHHHHHHHhccccceecee
Q 014320 121 -----------SETIDDFFSGQ----AAALAGGTTMHIDFVIPIN-------G----SLTAGFEAYEKKAKNSCMDYGFH 174 (427)
Q Consensus 121 -----------~~~~e~~~~~~----~~~l~~GvTtv~d~~~~~~-------~----~~~~~~~~~~~~~~~~~~~~~~~ 174 (427)
..++++++..+ ..++++||||+.|+..... . .....++..++.+.+..+...+.
T Consensus 80 ~wl~~~~~~~~~~~~e~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~g~~~~~~~~~~~~~~~a~~~~Gir~~~~~~~~ 159 (453)
T 3mdu_A 80 TWRELMYRMVARLSPEQIEVIACQLYIEMLKAGYTAVAEFHYVHHDLDGRSYADPAELSLRISRAASAAGIGLTLLPVLY 159 (453)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTEEEEEEEECCCSCTTSCCCSSTTHHHHHHHHHHHHHTCEEEEEECBC
T ss_pred HHHHHHhhhhhhCCHHHHHHHHHHHHHHHHHcCCcEEEEeeEeccccccccccchhhHHHHHHHHHHHhCCeEEEecchh
Confidence 12444554433 3478999999999642110 0 12345566666666543321111
Q ss_pred c--cc------------cCCChhhHHHHHHHHH---HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-C
Q 014320 175 M--AI------------TKWDEVVSDEMEVMVK---EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-E 236 (427)
Q Consensus 175 ~--~~------------~~~~~~~~~~~~~l~~---~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e 236 (427)
. +. ....++..+.++++.+ ..+. ++.+++++.+.+++++++++++.|+ .|+++++|+ |
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~e~l~~~~~~A~-~g~~v~~H~~e 235 (453)
T 3mdu_A 160 SHAGFGGQPASEGQRRFINGSEAYLELLQRLRAPLEAAGH---SLGLCFHSLRAVTPQQIATVLAAGH-DDLPVHIHIAE 235 (453)
T ss_dssp CBSSTTTCBCCGGGGGGCCCHHHHHHHHHHHHHHHHHHTC---EECEEEEETTTSCHHHHHHHHTSSC-TTSCEEEEESC
T ss_pred ccccccCCCCchhhhhccCCHHHHHHHHHHHHHHhhcCCC---eEEEecCCCCcCCHHHHHHHHHHHh-cCCCEEEEeCC
Confidence 0 00 0111223333333332 1232 5556777788899999999999999 999999995 7
Q ss_pred ChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCc
Q 014320 237 NGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVV 316 (427)
Q Consensus 237 ~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p 316 (427)
+..++..+.+. .|.. .+.. +......+.+..+.|+...+. +.++++++.|+.+.. ||
T Consensus 236 ~~~e~~~~~~~---~g~~----------------~v~~-l~~~g~~~~~~~~~H~~~~~~-~~i~~la~~g~~v~~--~P 292 (453)
T 3mdu_A 236 QQKEVDDCQAW---SGRR----------------PLQW-LYENVAVDQRWCLVHATHADP-AEVAAMARSGAVAGL--CL 292 (453)
T ss_dssp SHHHHHHHHHH---HSSC----------------HHHH-HHHHSCCCTTEEEEECCSCCH-HHHHHHHHHTCEEEE--CH
T ss_pred CHHHHHHHHHH---hCCC----------------HHHH-HHHcCCCCCCeEEEEcCCCCH-HHHHHHHHcCCEEEE--Cc
Confidence 87776655432 2210 1111 122223456788999887654 668888888876664 77
Q ss_pred cceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHh
Q 014320 317 SGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEER 396 (427)
Q Consensus 317 ~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~ 396 (427)
...... +.. .+| ++++++.|+.+++|||..+..... .+.+
T Consensus 293 ~sn~~l-----------g~g---~~p---------~~~~~~~Gv~v~lgtD~~~~~~~~-----------------~~~~ 332 (453)
T 3mdu_A 293 STEANL-----------GDG---IFP---------ATDFLAQGGRLGIGSDSHVSLSVV-----------------EELR 332 (453)
T ss_dssp HHHHHT-----------TCC---CCC---------HHHHHHTTCEEEECCBTCSCCCHH-----------------HHHH
T ss_pred hhHhhc-----------CCC---CCC---------HHHHHHCCCEEEEECCCCCCCCHH-----------------HHHH
Confidence 532211 111 234 456889999999999953211111 1223
Q ss_pred HHHHHHHHHh---------cCCCCHHHHHHHHchhhhcC
Q 014320 397 MHLVWDTMVE---------SGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 397 l~~~~~~~~~---------~~~l~l~~~v~~~t~npA~~ 426 (427)
......+... ..+++++++++++|.|||++
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~ 371 (453)
T 3mdu_A 333 WLEYGQRLRDRKRNRLYRDDQPMIGRTLYDAALAGGAQA 371 (453)
T ss_dssp HHHHHHHHHHTCSCCSCBTTBCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhccCCccccCcccCCCHHHHHHHHHHHHHHH
Confidence 3332222211 12799999999999999974
No 54
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=99.92 E-value=1.3e-26 Score=243.01 Aligned_cols=171 Identities=15% Similarity=0.211 Sum_probs=125.3
Q ss_pred CccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCC------------CCCCCceEEeCCCCEEeccccccccccccCcC
Q 014320 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNI------------NVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~------------~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~ 119 (427)
..|++|+|++|+|+.++..++|.|+||||++||+.. ..+++++|||++|++|+|||||+|+|+.++
T Consensus 336 ~~DLVItNA~IVD~tGi~kADI~IkDGRIaAIGkagnpD~~dgV~pdl~ig~gtEVIDA~GkiVtPGfID~HvHl~~P-- 413 (840)
T 4gy7_A 336 SLDTVITNAVIIDYTGIIKADIGIKDGLIASIGKAGNPDIMNGVFSNMIIGANTEVIAGEGLIVTAGAIDCHVHYICP-- 413 (840)
T ss_dssp SCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTCSSCCTTSBCCTTCEEEECTTCEEEECEEEEEEECCCT--
T ss_pred cCCEEEeCeEEECCCCeEEeeEEEECCEEEEEeccCCcccccccccccccCCCCEEEECCCCEEccCeeeeccCCCCC--
Confidence 468999999999998888999999999999999632 234578999999999999999999998765
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCC--------CcHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPIN--------GSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM 191 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 191 (427)
+ ....++.+||||+++.+.... ..................+++++........ .+.+.++
T Consensus 414 ~---------~~~eALasGVTTvv~gGtgp~~~~~~~~~~~~~~~~~~~l~a~~~~~vn~g~~~~~~~~~---~~~L~el 481 (840)
T 4gy7_A 414 Q---------LVYEAISSGITTLVGGGTGPAAGTRATTCTPSPTQMRLMLQSTDDLPLNFGFTGKGSSSK---PDELHEI 481 (840)
T ss_dssp H---------HHHHHHHHTEEEEEEECSSSCHHHHHSSCCCSHHHHHHHHHHTTTSSSEEEEEEECCCSS---SHHHHHH
T ss_pred C---------chHHHHHhhHHHHHhCCCceecCcccccccchHHHHHHHHhhhhcceeEEEEeCCCCccc---HHHHHHh
Confidence 1 134568899999997643211 0122233333344444556666554333222 2345666
Q ss_pred HHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhH
Q 014320 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAV 241 (427)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~ 241 (427)
. ..|+.++|.+..+. .+++.+.++++.++++|.++.+|+++....
T Consensus 482 ~-~aGa~g~K~~~~~~----~t~~~i~~aL~~A~e~g~~V~ih~e~~~~~ 526 (840)
T 4gy7_A 482 I-KAGAMGLKLHEDWG----STPAAIDNCLTIAEHHDIQINIHTDTLNEA 526 (840)
T ss_dssp H-HHTCSEEEEETTTC----CCHHHHHHHHHHHHHHTCEEEEECCTTCSS
T ss_pred h-hceeeEEEeccccC----CCHHHHHHHHHHHHHhCCEEEEeccCcchh
Confidence 5 68999999887543 578999999999999999999998765443
No 55
>3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X*
Probab=99.92 E-value=3.4e-25 Score=223.62 Aligned_cols=302 Identities=16% Similarity=0.163 Sum_probs=184.4
Q ss_pred cEEEECcEEEcCCCc--eeeeEEEeCCeEEEeeCCCCC-----CCCceEEeCCCCEEeccccccccccccC--------c
Q 014320 54 KILIKGGTVVNAHHQ--QIADVYVEDGIVVAVQPNINV-----GDDVKVLDATGKFVMPGGIDPHTHLAME--------F 118 (427)
Q Consensus 54 ~~~i~~~~i~~~~~~--~~~~i~i~~g~I~~vg~~~~~-----~~~~~viD~~g~~v~PG~ID~H~H~~~~--------~ 118 (427)
+++|+|++|++++.. ...+|+|+||||++||+..+. .++.++||++|++|+|||||+|+|+..+ +
T Consensus 37 ~~li~ng~I~t~~~~~~~~~~v~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~G~~v~PGfiD~H~H~~~~g~~~~~~dl 116 (534)
T 3icj_A 37 MKALINGTIYTSFSPVKKVSGLVISNERVLYAGDSSTALRIAELAGGEIIDLKGKFVMPAFFDSHLHLDELGMSLEMVDL 116 (534)
T ss_dssp EEEEESSEEEEEETTEEEESEEEEETTEEEEEECHHHHHHHHHHHTCEEEECTTCEEEECEEEEEECHHHHHHHHHSEEC
T ss_pred CEEEECCEEECCCCCCceeeEEEEECCEEEEEcChHHHHhhccCCCCEEEECCCCEEecCEeehhhhhhhhhhhcCccCC
Confidence 479999999997764 468999999999999986432 2457899999999999999999996542 0
Q ss_pred C------------------------------------------------------------------CC-----------
Q 014320 119 M------------------------------------------------------------------GS----------- 121 (427)
Q Consensus 119 ~------------------------------------------------------------------g~----------- 121 (427)
. |.
T Consensus 117 ~~~~s~~e~~~~l~~~~~~wi~g~G~~~~~~~~~pt~~~LD~~~~Pv~l~~~~~H~~~~Ns~AL~~~gi~~t~~p~G~tG 196 (534)
T 3icj_A 117 RGVKSMEELVERVKKGRGRIIFGFGWDQDELGRWPTREDLDVIDRPVFLYRRCFHVAVMNSKMIDLLNLKPSKDFDESTG 196 (534)
T ss_dssp TTCCSHHHHHHHHHTCCSSSEEEEEECHHHHSSCCCHHHHTTSSSCEEEEETTSSEEEECHHHHHHHCCCCCTTEETTTT
T ss_pred CCCCCHHHHHHHHHHHHhhCEEEcccCHHHhcCCCCHHHHhhCCCeEEEEecCCcHhHHhHHHHHHcCCCCCCCCCCCCc
Confidence 0 00
Q ss_pred -----------------C-ChhhH----HHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccccC
Q 014320 122 -----------------E-TIDDF----FSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITK 179 (427)
Q Consensus 122 -----------------~-~~e~~----~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (427)
. +.+.. ..+.+.+++.|||++.|+... ....+.++...+.+ +..+.+......
T Consensus 197 ~l~e~A~~~v~~~~p~~~l~~~~~~~~l~~a~~~~~~~GiTsv~d~~~~--~~~~~~~~~l~~~g-~l~~rv~~~~~~-- 271 (534)
T 3icj_A 197 IVRERALEESRKIINEKILTVKDYKHYIESAQEHLLSLGVHSVGFMSVG--EKALKALFELEREG-RLKMNVFAYLSP-- 271 (534)
T ss_dssp EEEHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTTEEEEEEEEEC--HHHHHHHHHHHHTT-CCCSEEEEEECG--
T ss_pred eeeHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhCCCEEEEeCCCC--HHHHHHHHHHHhCC-CCcEEEEEecCH--
Confidence 0 11111 223455688999999998532 12233333333332 233333222111
Q ss_pred CChhhHHHHHHHHH------HcCCCeEEEEEec-------------------CCCccCCHHHHHHHHHHHHHcCCcEEEe
Q 014320 180 WDEVVSDEMEVMVK------EKGINSFKFFMAY-------------------KGSFMINDELLIEGFKRCKSLGALAMVH 234 (427)
Q Consensus 180 ~~~~~~~~~~~l~~------~~g~~~ik~~~~~-------------------~~~~~~~~~~l~~~~~~a~~~g~~v~~H 234 (427)
+..+++.+... +..+.++|+|.+. .+.+.+++++++++++.|+++|+++++|
T Consensus 272 ---~~~~~~~~~~~~~~~~~~~~~~gvK~~~DG~~~~~tA~l~~pY~d~~~~~g~~~~~~e~l~~~v~~A~~~G~~v~~H 348 (534)
T 3icj_A 272 ---ELLDKLEELNLGKFEGRRLRIWGVKLFVDGSLGARTALLSEPYTDNPTTSGELVMNKDEIVEVIERAKPLGLDVAVH 348 (534)
T ss_dssp ---GGHHHHHHHTCCSEECSSEEEEEEEEESCCCTTTTCSCCSSCBTTBTTCCCCCSSCHHHHHHHHHHHTTTTCEEEEE
T ss_pred ---HHHHHHHHhccccCCCCcEEEEeEEEEEeCCCCccchhhcCCccCCCCCCCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 22333333210 0124568888762 2334578999999999999999999999
Q ss_pred cCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEec
Q 014320 235 AENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEP 314 (427)
Q Consensus 235 ~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~ 314 (427)
+.++..++..++.++ +.+.|..+.|+...+. +.++++++.|+.+. +
T Consensus 349 a~gd~ai~~~l~a~~-------------------------------~~~~r~~ieH~~~~~~-e~i~~la~~gv~~~--~ 394 (534)
T 3icj_A 349 AIGDKAVDVALDAFE-------------------------------EAEFSGRIEHASLVRD-DQLERIKELKVRIS--A 394 (534)
T ss_dssp ECSHHHHHHHHHHHH-------------------------------HHTCCCEEEECCBCCH-HHHHHHHHHTCEEE--E
T ss_pred EcChHHHHHHHHHHH-------------------------------hccCCCEEEECCCCCH-HHHHHHHHcCCeEE--E
Confidence 988766654432222 1125678999987764 77889999997655 4
Q ss_pred CccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhh
Q 014320 315 VVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIE 394 (427)
Q Consensus 315 ~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e 394 (427)
||.+...+. .+. ..++. .+....+| ++++++. +.+++|||. |..+... +. .
T Consensus 395 ~P~~~~~~~-~~~-~~lg~-~r~~~~~p---------~~~l~~~-v~valGSD~-p~~~~~p------~~---------~ 445 (534)
T 3icj_A 395 QPHFIVSDW-WIV-NRVGE-ERAKWAYR---------LKTLSSI-TKLGFSTDS-PIEPADP------WV---------S 445 (534)
T ss_dssp CTTHHHHCT-THH-HHHHH-HHGGGBTC---------HHHHHHH-SCEEECCTT-TTSCCCH------HH---------H
T ss_pred ccccccchh-HHH-HhhCH-HHHhccHH---------HHHHHHh-CCEEeecCC-CCCCCCH------HH---------H
Confidence 787654322 110 00000 01112234 4558888 999999997 4432111 00 0
Q ss_pred HhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 395 ERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 395 ~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
.........+....++|++++++++|.|+|+.
T Consensus 446 ~~~av~r~~~~~~~~ls~~eaL~~~T~~~A~~ 477 (534)
T 3icj_A 446 IDAAVNRYVVDPGERVSREEALHLYTHGSAQV 477 (534)
T ss_dssp HHHHHHCCSSCGGGCCCHHHHHHHTTHHHHHH
T ss_pred HHHHHhccccCcccCCCHHHHHHHHHHHHHHH
Confidence 00000000011246799999999999999974
No 56
>4ac7_C Urease subunit alpha; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 4ubp_C* 1ie7_C*
Probab=99.91 E-value=4.9e-24 Score=213.50 Aligned_cols=169 Identities=18% Similarity=0.214 Sum_probs=132.2
Q ss_pred CccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCC------------CCCceEEeCCCCEEeccccccccccccCcC
Q 014320 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV------------GDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~------------~~~~~viD~~g~~v~PG~ID~H~H~~~~~~ 119 (427)
..|++|+|++|+++.+...++|+|+||||++|++.... .++.++||++|++|+|||||+|+|+..+
T Consensus 66 ~~dllI~n~~vvd~~g~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v~PG~ID~HvH~~~P-- 143 (570)
T 4ac7_C 66 VLDLLLTNALILDYTGIYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVHFINP-- 143 (570)
T ss_dssp BCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTCSSCCTTCBCCTTCEEEECTTCEEEECEEEEEEECCCT--
T ss_pred CCCEEEECeEEECCCCcEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEEeeCEEecccccCCc--
Confidence 56899999999998777789999999999999985321 2457899999999999999999999776
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcC-------CCCC-cHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVI-------PING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM 191 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 191 (427)
+. .++++++||||+++.+. ..+. .....++.+.+......+++++++.... ..++++.++
T Consensus 144 g~---------~~aAl~gGvTTvv~gg~~p~~~~n~~p~~~~~~~l~~~l~aa~~~~v~~~~~g~~~~---~~l~el~el 211 (570)
T 4ac7_C 144 DQ---------VDVALANGITTLFGGGTGPAEGSKATTVTPGPWNIEKMLKSTEGLPINVGILGKGHG---SSIAPIMEQ 211 (570)
T ss_dssp TH---------HHHHHHTTEEEEEEECSSSCHHHHHSSCCCHHHHHHHHHHHHTTCSSEEEEEEECCC---SSHHHHHHH
T ss_pred ch---------HHHHHhcCCeEEEecCcCcccccCCcCcCCcHHHHHHHHHHhhhCCeeEEEEeccCC---cCHHHHHHH
Confidence 31 36789999999996321 1111 2344566666666667888888764332 236677887
Q ss_pred HHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChh
Q 014320 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGD 239 (427)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~ 239 (427)
. +.|+.++|.+.++. .+++.++++++.|+++|+++.+|+++..
T Consensus 212 ~-~aGa~gfK~~~~~~----~~~~~L~~aL~~A~~~g~~V~iHae~l~ 254 (570)
T 4ac7_C 212 I-DAGAAGLKIHEDWG----ATPASIDRSLTVADEADVQVAIHSDTLN 254 (570)
T ss_dssp H-HHTCCEEEEEGGGC----CCHHHHHHHHHHHHHHTCEEEEECCTTC
T ss_pred H-HcCCCeEeeccCCC----CCHHHHHHHHHHHHHcCCEEEEEcCCcc
Confidence 7 78999999997653 5899999999999999999999998653
No 57
>4ubp_C Protein (urease (chain C)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.92.1.1 c.1.9.2 PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 1ie7_C*
Probab=99.91 E-value=4.9e-24 Score=213.50 Aligned_cols=169 Identities=18% Similarity=0.214 Sum_probs=132.2
Q ss_pred CccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCCCC------------CCCceEEeCCCCEEeccccccccccccCcC
Q 014320 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNINV------------GDDVKVLDATGKFVMPGGIDPHTHLAMEFM 119 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~~~------------~~~~~viD~~g~~v~PG~ID~H~H~~~~~~ 119 (427)
..|++|+|++|+++.+...++|+|+||||++|++.... .++.++||++|++|+|||||+|+|+..+
T Consensus 66 ~~dllI~n~~vvd~~g~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v~PG~ID~HvH~~~P-- 143 (570)
T 4ubp_C 66 VLDLLLTNALILDYTGIYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVHFINP-- 143 (570)
T ss_dssp BCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTCTTCCTTCBCCTTCEEEECTTCEEEECEEEEEEECCCT--
T ss_pred CCCEEEECeEEECCCCcEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEEeeCEEEcccCCCCc--
Confidence 56899999999998777789999999999999985321 2457899999999999999999999776
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcC-------CCCC-cHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVI-------PING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVM 191 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 191 (427)
+. .++++++||||+++.+. ..+. .....++.+.+......+++++++.... ..++++.++
T Consensus 144 g~---------~~aAl~gGvTTvv~gg~~p~~~~n~~p~~~~~~~l~~~l~aa~~~~v~~~~~g~~~~---~~l~el~el 211 (570)
T 4ubp_C 144 DQ---------VDVALANGITTLFGGGTGPAEGSKATTVTPGPWNIEKMLKSTEGLPINVGILGKGHG---SSIAPIMEQ 211 (570)
T ss_dssp TH---------HHHHHHTTEEEEEEECCSSCHHHHHSSCCCHHHHHHHHHHHHTTCSSEEEEEEECCC---SSHHHHHHH
T ss_pred ch---------HHHHHhcCCeEEEecCccccccCCCcCCCCcHHHHHHHHHHhhhCCeeEEEEeccCC---cCHHHHHHH
Confidence 31 36789999999996321 1111 2344566666666667888888764332 236677887
Q ss_pred HHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChh
Q 014320 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGD 239 (427)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~ 239 (427)
. +.|+.++|.+.++. .+++.++++++.|+++|+++.+|+++..
T Consensus 212 ~-~aGa~gfK~~~~~~----~~~~~L~~aL~~A~~~g~~V~iHae~l~ 254 (570)
T 4ubp_C 212 I-DAGAAGLKIHEDWG----ATPASIDRSLTVADEADVQVAIHSDTLN 254 (570)
T ss_dssp H-HHTCCEEEEEGGGC----CCHHHHHHHHHHHHHHTCEEEEECCTTC
T ss_pred H-HcCCCeEeeccCCC----CCHHHHHHHHHHHHHcCCEEEEEcCCcc
Confidence 7 78999999997653 5899999999999999999999998653
No 58
>3hpa_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified}
Probab=99.91 E-value=4.2e-22 Score=198.90 Aligned_cols=315 Identities=17% Similarity=0.252 Sum_probs=179.7
Q ss_pred CccEEEECcEEE-cCCC----ceeeeEEEeCCeEEEeeCCCCCC-CCceEEeCCCCEEeccccccccccccCcC-CC---
Q 014320 52 SSKILIKGGTVV-NAHH----QQIADVYVEDGIVVAVQPNINVG-DDVKVLDATGKFVMPGGIDPHTHLAMEFM-GS--- 121 (427)
Q Consensus 52 ~~~~~i~~~~i~-~~~~----~~~~~i~i~~g~I~~vg~~~~~~-~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g~--- 121 (427)
+.+++|+|++|+ +.++ +++++|+|+||||++||+..+.+ .+.++||++|++|+|||||+|+|+.++.. +.
T Consensus 28 p~~llI~na~vi~T~D~~~~vi~~gdV~I~dgrI~aVG~~~~~~~~~~~vIDa~G~~v~PG~ID~H~H~~~~~~~g~~~~ 107 (479)
T 3hpa_A 28 PKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAELPETADEVLDLRGHLVIPGLVNTHHHMYQSLTRAVPAA 107 (479)
T ss_dssp -CEEEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEEEGGGSCSCCSEEEECTTEEEEECEEECCCCGGGGGSCSCTTT
T ss_pred CCCEEEECCEEEEeeCCCCCEEcCcEEEEECCEEEEEeCCccCCCCCCeEEECCCCEEeeCceeHhhCcchhcccccccC
Confidence 568999999976 4432 46899999999999999876544 45689999999999999999999865421 00
Q ss_pred ------------------CChhhH----HHHHHHHHcCCceEEecCcCCCCC--cHHHHHHHHHHHhccccceeceec--
Q 014320 122 ------------------ETIDDF----FSGQAAALAGGTTMHIDFVIPING--SLTAGFEAYEKKAKNSCMDYGFHM-- 175 (427)
Q Consensus 122 ------------------~~~e~~----~~~~~~~l~~GvTtv~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-- 175 (427)
...+.. ......++..|+|++.++...... ......+.....+.+.........
T Consensus 108 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 187 (479)
T 3hpa_A 108 QNAELFGWLTNLYKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNGSRLDDSIGAAQRIGMRFHASRGAMSVG 187 (479)
T ss_dssp TTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEECCBCCCCTTCCHHHHHHHHHHHTCEEEEEEEECC--
T ss_pred CCcchHHHHhhhhhhhhhcCHHHHHHHHHHHHHHHHHhCCceecceeeeccchhhHHHHHHHHHHhcchhhhhhheeecc
Confidence 111111 123455689999999987543322 344444555554433222111100
Q ss_pred ----c-----ccCCChhhHHHHHHHHHH---cC-CCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhH
Q 014320 176 ----A-----ITKWDEVVSDEMEVMVKE---KG-INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAV 241 (427)
Q Consensus 176 ----~-----~~~~~~~~~~~~~~l~~~---~g-~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~ 241 (427)
. .........+...++... .+ .........++.....+.+.+.++...|++.|..+++|. +...++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~h~~~~~~~~ 267 (479)
T 3hpa_A 188 QRDGGLPPDSVVEREPDILRDTQRLIETYHDEGRYAMLRVVVAPCSPFSVSRDLMRDAAVLAREYGVSLHTHLAENVNDI 267 (479)
T ss_dssp --------------CHHHHHHHHHHHHHHCCCSTTCSEEEEEEESCTTTSCHHHHHHHHHHHHHHTCEEEEEESCSHHHH
T ss_pred ccccCCCchhhhhhhhhHHHHHHHHHHHhhhhcccccceeEecccccccCCHHHHHHHHHHHHhcCCeEEeecccchHHH
Confidence 0 001111222223333221 12 123445556666777899999999999999999999996 444333
Q ss_pred HHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceee
Q 014320 242 FEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVL 321 (427)
Q Consensus 242 ~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~ 321 (427)
.... ...|.. .+ .........+.+..+.|+..... ..++..++.+..+. .+|.....
T Consensus 268 ~~~~---~~~g~~----------------~~-~~~~~~~~~~~~~~~~h~~~~~~-~~~~~~~~~~~~~~--~~p~~~~~ 324 (479)
T 3hpa_A 268 AYSR---EKFGMT----------------PA-EYAEDLGWVGHDVWHAHCVQLDD-AGIGLFARTGTGVA--HCPCSNMR 324 (479)
T ss_dssp HC----------C----------------HH-HHHHHTTCCSTTEEEEECTTCCH-HHHHHHHHHTCEEE--ECHHHHHH
T ss_pred HHHH---HHcCCc----------------hH-HHHhhhccccccceeeeeEecch-hHHHHHHhcCCcee--eccccccc
Confidence 2111 111110 00 01111122345677888766443 33445555554444 35542221
Q ss_pred CcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHH
Q 014320 322 DDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVW 401 (427)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~ 401 (427)
... . .+| ....+..|+.+.+|||..+.+... ....+.+...++
T Consensus 325 ~~~-----------~---~~~---------~~~~~~~~~~v~~gtD~~~~~~~~--------------~~~~~~~~~~~~ 367 (479)
T 3hpa_A 325 LAS-----------G---IAP---------VKKMRLAGVPVGLGVDGSASNDGA--------------QMVAEVRQALLL 367 (479)
T ss_dssp TTC-----------C---CCC---------HHHHHHHTCCEEECCCCTTSSCCC--------------CHHHHHHHHHHH
T ss_pred ccc-----------C---ccc---------hhHHHhcCCcEEeeccccccCCCc--------------cHHHHHHHHHHH
Confidence 111 0 122 344677899999999976543211 122333333332
Q ss_pred H-HHHhcCCCCHHHHHHHHchhhhcC
Q 014320 402 D-TMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 402 ~-~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
. .....+++|++++++++|.|||++
T Consensus 368 ~~~~~~~~~ls~~eal~~~T~~~A~~ 393 (479)
T 3hpa_A 368 QRVGFGPDAMTAREALEIATLGGAKV 393 (479)
T ss_dssp HHHHHCTTSCCHHHHHHHTTHHHHHH
T ss_pred HhhhccccCCCHHHHHHHHHHHHHHH
Confidence 1 233456899999999999999984
No 59
>4ep8_C Urease subunit alpha; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1ef2_A* 4epb_C* 4epd_C* 4epe_C* 1ejx_C* 1ejw_C* 1fwj_C* 1kra_C 2kau_C* 1a5k_C 1ejv_C* 1ejt_C* 1eju_C* 1ejs_C* 1a5m_C 1a5n_C 1ejr_C* 1a5l_C 1a5o_C 1fwa_C* ...
Probab=99.89 E-value=3.7e-26 Score=234.03 Aligned_cols=332 Identities=13% Similarity=0.079 Sum_probs=181.9
Q ss_pred CccEEEECcEEEcCCCceeeeEEEeCCeEEEeeCCC----------CCCCCceEEeCCCCEEeccccccccccccCcCCC
Q 014320 52 SSKILIKGGTVVNAHHQQIADVYVEDGIVVAVQPNI----------NVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS 121 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~~~~~~i~i~~g~I~~vg~~~----------~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~ 121 (427)
..|++|+|++|+|+.++.+++|+|+||||++||+.. ..++++++||++|++|+|||||+|+|+.++ +.
T Consensus 64 ~~DlvI~Na~Ivd~~Gi~kaDIlIkDGrIaaIG~ag~pd~~d~vdl~~~~g~eVIDA~GkiV~PG~ID~HvH~~~~--~~ 141 (566)
T 4ep8_C 64 CVDLVLTNALIVDHWGIVKADIGVKDGRIFAIGKAGNPDIQPNVTIPIGAATEVIAAEGKIVTAGGIDTHIHWICP--QQ 141 (566)
T ss_dssp SCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECEECTTTCSSCCEECCTTCEEEECTTCEEEECEEEEEEECSCT--TH
T ss_pred CCCEEEECcEEECCCCeEEeEEEEECCEEEEeecCCCcccccccccccCCCCEEEECCCCEEEcCEEEecccccCC--Cc
Confidence 579999999999998888999999999999999732 234578999999999999999999999876 21
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcC-------C-CCCcHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHH
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVI-------P-INGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVK 193 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 193 (427)
. ..+...+.++...... . ....................++++++........ .....+.
T Consensus 142 ~---------~~a~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~---~~~~~~~- 208 (566)
T 4ep8_C 142 A---------EEALVSGVTTMVGGGTGPAAGTHATTCTPGPWYISRMLQAADSLPVNIGLLGKGNVSQP---DALREQV- 208 (566)
T ss_dssp H---------HHHHHHTEEEEEEECSSSSHHHHHCCCCCHHHHHHHHHHHHTTSSSEEEEEEECCCSCH---HHHHHHH-
T ss_pred c---------chhhhhhHHHHhhCceEEEEecCCCCCchHHHHHHHHHHhccccceeeeeecccccccc---hhhHHHh-
Confidence 1 1112223333322110 1 1113344444555555567777777655443332 2333333
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATT 273 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~ 273 (427)
..++..++.+..+. .....+......+...+....+|.+.........+.....+-.....+....+...+...+.
T Consensus 209 ~a~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (566)
T 4ep8_C 209 AAGVIGLKIHEDWG----ATPAAIDCALTVADEMDIQVALHSDTLNESGFVEDTLAAIGGRTIHTFHTEGAGGGHAPDII 284 (566)
T ss_dssp HHTCSEEEEEGGGC----CCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHHHHTTCCEEETTTTSTTSSSTTTGG
T ss_pred hhcccccccccccc----ccchhhhhHhHHHHHhcchhhhhhhhHHHHHHHHhhHhhccCccccccccccchhHHHHHHH
Confidence 56777888776543 45667777888888899999999865544332222222222222222222222221112222
Q ss_pred HHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHH
Q 014320 274 RAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQ 353 (427)
Q Consensus 274 ~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~ 353 (427)
+....+.....+.+..|.......+..... ..++||+.++..... ...+..++ .......+
T Consensus 285 ~~~~~a~~~~~~~~~~~~~~~~~~~e~~~~---------~~~~h~l~~~~~~~~-------~~~~~~~~---~~~~~~~~ 345 (566)
T 4ep8_C 285 TACAHPNILPSSTNPTLPYTLNTIDEHLDM---------LMVCHHLDPDIAEDV-------AFAESRIR---RETIAAED 345 (566)
T ss_dssp GGGGCTTEEEEECSTTSSCBTTHHHHHHHH---------HHHHHTCCTTCHHHH-------HHHHHHCC---HHHHHHHH
T ss_pred HHHHHHhhcCCceeehhHHHHHHhhcccce---------EEEeecccCChhhHH-------hhccCCCc---ccchHHHH
Confidence 222211111111222222222221111111 124566655433221 01111111 22334455
Q ss_pred HHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 354 AALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 354 ~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
..+..|.++.+++||.++....+.. ..+..+.......+..++...+..++++++++++++|.||||+
T Consensus 346 ~l~~~G~~~~i~sD~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~gls~~eal~~aTiNPAra 413 (566)
T 4ep8_C 346 VLHDLGAFSLTSSDSQAMGRVGEVI-----LRTWQVAHRMKVQRGALAEETGDNDNFRVKRYIAKYTINPALT 413 (566)
T ss_dssp HHHHHTSSCEECCCTTSSSCTTCHH-----HHHHHHHHHHHHHHCSCTTCCSSSCHHHHHHHHGGGTHHHHHH
T ss_pred HHHhCCCcceEeecccccccccccc-----cccCCCCchHHHHHHHHHHhhhhcCCCCHHHHHHHHHHHHHHH
Confidence 6677899999999999987654421 1111111112222222221223456799999999999999985
No 60
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}
Probab=99.89 E-value=1e-22 Score=199.51 Aligned_cols=294 Identities=21% Similarity=0.146 Sum_probs=167.5
Q ss_pred CccEEEECcEEEcCCC-ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCC---------
Q 014320 52 SSKILIKGGTVVNAHH-QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGS--------- 121 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~-~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~--------- 121 (427)
+.+++|+|++|+++++ ...++|+|+||||++|++..+ +++.++||++|++|+|||||+|+|+.....+.
T Consensus 4 ~~~~~i~~~~i~~~~~~~~~~~v~i~~g~I~~i~~~~~-~~~~~~id~~g~~~~Pg~~d~h~h~~~~~~~~~~~~~~~~~ 82 (396)
T 3ooq_A 4 SVKILFKNATVFPITSRPFKGDVLVSNGKVEKVGENIE-DPDAEIVDLTGKFLFPGFVDAHSHIGLFEEGVGYYYSDGNE 82 (396)
T ss_dssp --CEEEEEEEECCSSSCCEEEEEEEETTEEEEEESCCC-CTTSEEEECTTCEEEECEEEEEECTTTSCTTSCGGGCCSCC
T ss_pred cceEEEECcEEEeCCCCeEEeEEEEECCEEEEecCCCC-CCCCeEEECCCCEEecCEEecccccCccccCcccccccccc
Confidence 3568999999999875 334899999999999998765 56789999999999999999999998642211
Q ss_pred --------CChhhHH----HHHHHHHcCCceEEecCcCCCCCc---------HHHHHHHHHHHhccccce--eceec---
Q 014320 122 --------ETIDDFF----SGQAAALAGGTTMHIDFVIPINGS---------LTAGFEAYEKKAKNSCMD--YGFHM--- 175 (427)
Q Consensus 122 --------~~~e~~~----~~~~~~l~~GvTtv~d~~~~~~~~---------~~~~~~~~~~~~~~~~~~--~~~~~--- 175 (427)
...++.+ .....++++|||++.++....+.. .....+..... ....+. ++.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~gs~~~i~G~~~~~~~~~~~~~~~~~~-~~~~i~~~~g~~~~~~ 161 (396)
T 3ooq_A 83 ATDPVTPHVKALDGFNPQDPAIERALAGGVTSVMIVPGSANPVGGQGSVIKFRSIIVEECIVK-DPAGLKMAFGENPKRV 161 (396)
T ss_dssp TTCSBCTTCBGGGGCCTTCHHHHHHHTTTEEEEEECCCSSSSEEEEEEEEESCCSSHHHHEEE-EEEEEEEECSHHHHHH
T ss_pred ccCccCccccHhhhcCcCcHHHHHHHhCCeEEEeccCCCCCcccCeeEEEeccCCCHHHceec-CCcEEEEEcCCCCccc
Confidence 1111111 356788999999999985332110 00000100000 001111 11000
Q ss_pred --cc---cCCChhhHHHHHHHHH---Hc--CCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHH
Q 014320 176 --AI---TKWDEVVSDEMEVMVK---EK--GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQ 245 (427)
Q Consensus 176 --~~---~~~~~~~~~~~~~l~~---~~--g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~ 245 (427)
.. ........+.+++... +. +.... ....+.. ...+...+.+..+.+.++++.+|+...+.+
T Consensus 162 ~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~g~~-~~~~~~~e~l~~~~~~~~~v~iHa~~~~~i---- 233 (396)
T 3ooq_A 162 YGERKQTPSTRMGTAGVIRDYFTKVKNYMKKKELA---QKEGKEF-TETDLKMEVGEMVLRKKIPARMHAHRADDI---- 233 (396)
T ss_dssp HHHTTCSCSSHHHHHHHHHHHHHHHHHHHHHHHHH---HHTTCCC-CCCCHHHHHHHHHHTTSSCEEEEECSHHHH----
T ss_pred ccccCCCCccHHHHHHHHHHHHHHHHHHHHhhhhh---hhccCCC-CCcChhHHHHHHHHcCCCcEEEEECchhHH----
Confidence 00 0000011122222221 00 00000 0000111 111223334444457899999999765433
Q ss_pred HHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCccc
Q 014320 246 KRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSW 325 (427)
Q Consensus 246 ~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~ 325 (427)
.+.++.+++.|.++.+.|+..... .++++++.|+.+.. ||.+.+.....
T Consensus 234 ---------------------------~~~~~~~~~~g~~~~i~H~~~~~~--~~~~l~~~gv~v~~--~P~~~~~~~~~ 282 (396)
T 3ooq_A 234 ---------------------------LTAIRIAEEFGFNLVIEHGTEAYK--ISKVLAEKKIPVVV--GPLLTFRTKLE 282 (396)
T ss_dssp ---------------------------HHHHHHHHHHTCCEEEEECTTGGG--GHHHHHHHTCCEEE--CCCSSCCCSGG
T ss_pred ---------------------------HHHHHHHHHcCCCEEEecCchHHH--HHHHHHHCCCCEEE--Ccccccccchh
Confidence 234455556678889999987653 47888899988875 66543221111
Q ss_pred ccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHH
Q 014320 326 LWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMV 405 (427)
Q Consensus 326 ~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~ 405 (427)
.. ......+..+++.|+.++++||+ |..+.. .+...+ ...
T Consensus 283 ~~------------------~~~~~~~~~l~~~Gv~v~lgtD~-~~~~~~--------------------~l~~~~-~~~ 322 (396)
T 3ooq_A 283 LK------------------DLTMETIAKLLKDGVLIALMCDH-PVIPLE--------------------FATVQA-ATA 322 (396)
T ss_dssp GT------------------TCCTTHHHHHHHTTCCEEECCTT-TTSCGG--------------------GHHHHH-HHG
T ss_pred HH------------------hhhhHHHHHHHHCCCEEEEEcCC-CccCcc--------------------HHHHHH-HHH
Confidence 10 00112467788999999999997 433211 111222 223
Q ss_pred hcCCCCHHHHHHHHchhhhcC
Q 014320 406 ESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 406 ~~~~l~l~~~v~~~t~npA~~ 426 (427)
.+.+++++++++++|.|||++
T Consensus 323 ~~~gl~~~~al~~~T~n~A~~ 343 (396)
T 3ooq_A 323 MRYGAKEEDLLKILTVNPAKI 343 (396)
T ss_dssp GGGTCCHHHHHHTTTHHHHHH
T ss_pred HHcCCCHHHHHHHHHHHHHHH
Confidence 456799999999999999974
No 61
>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A*
Probab=99.86 E-value=2.7e-21 Score=188.40 Aligned_cols=187 Identities=14% Similarity=0.167 Sum_probs=118.6
Q ss_pred EEEECcEEEcCCC-ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcC-C----CCChhhHH
Q 014320 55 ILIKGGTVVNAHH-QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFM-G----SETIDDFF 128 (427)
Q Consensus 55 ~~i~~~~i~~~~~-~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~-g----~~~~e~~~ 128 (427)
++|+|++|++++. ..+++|+|+||||++|++..+.+.+.++||++|++|+|||||+|+|+..... . ..+++.++
T Consensus 2 ~li~~~~v~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~g~~~~~~~~~~~~~~~~ 81 (382)
T 1yrr_A 2 YALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEIEQRSLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVETLE 81 (382)
T ss_dssp EEEESSEEECSSCEESSEEEEEETTEEEEEEEGGGSCTTCCEEECTTCEEEECEEEEEESEETTEESSSSTTTSSHHHHH
T ss_pred EEEEeeEEEcCCceeeCCEEEEECCEEEEEecCCCCCccceeecCCCCEEccCEEEEeecccCCcCccccccCCCHHHHH
Confidence 5899999999876 3578999999999999976443445689999999999999999999754210 1 12566777
Q ss_pred HHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHH----hccccceeceeccc--cC-----CC----hhhHHHHHHHH
Q 014320 129 SGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKK----AKNSCMDYGFHMAI--TK-----WD----EVVSDEMEVMV 192 (427)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~--~~-----~~----~~~~~~~~~l~ 192 (427)
..++.++++||||++|+....+. ...+.+...++. +.+ .+.+...++. .. .. ....+.++ +.
T Consensus 82 ~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~g~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~-~~ 159 (382)
T 1yrr_A 82 IMQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQ-ALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVD-FL 159 (382)
T ss_dssp HHHHHHHHTTEEEEEEEEECCCHHHHHHHHHHHHHHHHHCTTS-BCCEEEECSSCCCSCC-CCCSCSCCHHHHHHHH-HH
T ss_pred HHHHHHHhCCeEEEEeecCCCCHHHHHHHHHHHHHHhhccCCc-eeEEEEeCCcCCccccCCCCHHHccCCCHHHHH-HH
Confidence 77889999999999997543221 122223333322 222 1111111111 00 00 11123344 55
Q ss_pred HHcCCCeEEEEE-ecCCCccCCHHHHHHHHHHHHHcCCcEEE-ecC-ChhhHHHHHHHHHHcCCCC
Q 014320 193 KEKGINSFKFFM-AYKGSFMINDELLIEGFKRCKSLGALAMV-HAE-NGDAVFEGQKRMIELGITG 255 (427)
Q Consensus 193 ~~~g~~~ik~~~-~~~~~~~~~~~~l~~~~~~a~~~g~~v~~-H~e-~~~~~~~~~~~l~~~G~~~ 255 (427)
..+.+.+|.+. .+ .+.+.++++.|+++|+++++ |+. +.+++... .+.|...
T Consensus 160 -~~~~~~ik~~~~~~-------~~~~~~~~~~a~~~g~~v~~gH~~~~~~~~~~~----~~~G~~~ 213 (382)
T 1yrr_A 160 -CENADVITKVTLAP-------EMVPAEVISKLANAGIVVSAGHSNATLKEAKAG----FRAGITF 213 (382)
T ss_dssp -HHTTTTEEEEEECG-------GGSCHHHHHHHHHTTCEEEECSCCCCHHHHHHH----HHHTCCE
T ss_pred -HhcCCCEEEEEECC-------CCChHHHHHHHHHCCCEEEEECCCCCHHHHHHH----HHcCCCe
Confidence 46778888753 21 14455789999999999998 985 66555433 3356543
No 62
>3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A*
Probab=99.83 E-value=1.7e-19 Score=173.47 Aligned_cols=109 Identities=17% Similarity=0.191 Sum_probs=84.8
Q ss_pred EEEECcEEEcCCCc-eeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccC--cCCCCChhhHHHHH
Q 014320 55 ILIKGGTVVNAHHQ-QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAME--FMGSETIDDFFSGQ 131 (427)
Q Consensus 55 ~~i~~~~i~~~~~~-~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~--~~g~~~~e~~~~~~ 131 (427)
++|+|++|++++.. .+++|+|+||||++|++..+.+.+.++||++|++|+|||||+|+|.... +....+++++.+.+
T Consensus 5 ~~i~n~~i~~~~~~~~~~~i~I~dG~I~~i~~~~~~~~~~~viD~~G~~v~PGfID~HvHg~~G~~~~d~~~~e~l~~~~ 84 (381)
T 3iv8_A 5 YALTNCKIYTGNDVLVKHAVIINGDKIEAVCPIESLPSEMNVVDLNGANLSPGFIDLQLNGCGGVMFNDEITAETIDTMH 84 (381)
T ss_dssp EEEEEEEEECSSCEESSEEEEEETTEEEEEEEGGGSCTTCEEEEEEEEEEEECEEEEEECEETTEETTTSCSHHHHHHHH
T ss_pred EEEEccEEEcCCCeEeccEEEEECCEEEEEeCCCCCCCCCeEEECCCCEEccCeEeeeecccCCCCCCCCCCHHHHHHHH
Confidence 68999999998874 4679999999999999865545567899999999999999999997543 11224678899999
Q ss_pred HHHHcCCceEEecCcCCCCC-cHHHHHHHHHHH
Q 014320 132 AAALAGGTTMHIDFVIPING-SLTAGFEAYEKK 163 (427)
Q Consensus 132 ~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~ 163 (427)
+.++++|||+++++..+.+. ...+.++.+++.
T Consensus 85 ~a~~~~GvTt~l~t~~T~~~e~l~~al~~~~~~ 117 (381)
T 3iv8_A 85 KANLKSGCTSFLPTLITSSDENMRQAIAAAREY 117 (381)
T ss_dssp HHHHHTTEEEEEEEEESCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCccccccccCCCCHHHHHHHHHHHHHH
Confidence 99999999999987654333 344555544443
No 63
>3mtw_A L-arginine carboxypeptidase CC2672; hydrolase; HET: KCX M3R; 1.70A {Caulobacter vibrioides}
Probab=99.78 E-value=3.7e-18 Score=164.17 Aligned_cols=184 Identities=15% Similarity=0.140 Sum_probs=108.8
Q ss_pred EEEECcEEEcCCC---ceeeeEEEeCCeEEEeeCCCC-CCCCceEEeCCCCEEeccccccccccccCcCCCC-----Chh
Q 014320 55 ILIKGGTVVNAHH---QQIADVYVEDGIVVAVQPNIN-VGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSE-----TID 125 (427)
Q Consensus 55 ~~i~~~~i~~~~~---~~~~~i~i~~g~I~~vg~~~~-~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~-----~~e 125 (427)
++|+|++|+|+.+ .++++|+|+||||++||+..+ .+++.++||++|++|+|||||+|+|+........ ..+
T Consensus 4 ~aI~narviD~~~g~~i~~~~V~I~dG~I~~Ig~~~~~~~~~~~vID~~G~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~ 83 (403)
T 3mtw_A 4 KAVSAARLLDVASGKYVDNPLVIVTDGRITSIGKKGDAVPAGATAVDLPGVTLLPGLIDMHVHLDSLAEVGGYNSLEYSD 83 (403)
T ss_dssp EEEEEEEEEETTTTEEEESEEEEEETTEEEEEEETTCCCCTTCEEEEEEEEEEEECEEEEEECTTCCTTCCGGGGGGSCH
T ss_pred EEEEceEEEECCCCcEecCcEEEEECCEEEEEeCCCCCCCCCCEEEECCCCEEEeChheeeeCCccccccCccccccccH
Confidence 6899999999764 467999999999999998754 3467899999999999999999999876521110 011
Q ss_pred hHH-----HHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhcccccee-------ceecc---------c-------
Q 014320 126 DFF-----SGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDY-------GFHMA---------I------- 177 (427)
Q Consensus 126 ~~~-----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~---------~------- 177 (427)
.+. ......+..|+|+..+...... ................... ..... .
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (403)
T 3mtw_A 84 RFWSVVQTANAKKTLEAGFTTVRNVGAADY--DDVGLREAIDAGYVPGPRIVTAAISFGATGGHCDSTFFPPSMDQKNPF 161 (403)
T ss_dssp HHHHHHHHHHHHHHHHTTEEEEEECCCSTT--HHHHHHHHHHTTSSCCCEEEECCSCEESTTSTTSCCSSCGGGCCCCTT
T ss_pred HHHhhhhhhhhhhccccccceeeccccccc--cchhhhhhhhcccccccccccccccccccccccccccccccccccccc
Confidence 111 1223457889999988754322 1111111111111100000 00000 0
Q ss_pred cCC-ChhhHHHHHHHHHHcCCCeEEEEEec--------CCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhH
Q 014320 178 TKW-DEVVSDEMEVMVKEKGINSFKFFMAY--------KGSFMINDELLIEGFKRCKSLGALAMVHAENGDAV 241 (427)
Q Consensus 178 ~~~-~~~~~~~~~~l~~~~g~~~ik~~~~~--------~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~ 241 (427)
... ..+......... ..+....+..... ........+++.++++.+++.+.++.+|.......
T Consensus 162 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 233 (403)
T 3mtw_A 162 NSDSPDEARKAVRTLK-KYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAHAHGASGI 233 (403)
T ss_dssp CCCSHHHHHHHHHHHH-HTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEEECSHHHH
T ss_pred ccchhHHHhhhhHhhh-hhcchhhhhhhccccccccccccccccCHHHHHHHHHHHHHcCCeEEEEeccchhH
Confidence 000 011122222222 4555555444321 22334578899999999999999999998766544
No 64
>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10
Probab=99.77 E-value=8.3e-19 Score=170.28 Aligned_cols=69 Identities=25% Similarity=0.325 Sum_probs=56.4
Q ss_pred eeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCC
Q 014320 69 QIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIP 148 (427)
Q Consensus 69 ~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~ 148 (427)
.+++|+|+||||++|++ . + || +|++|+|||||+|+|+.++.. ... .++...+++++++||||++|+...
T Consensus 28 ~~~~V~I~~g~I~~vg~-----~--~-iD-~g~~v~PGlID~H~H~~~~~~-~~~-~~l~~~~~~~l~~GvTtv~d~~~~ 96 (376)
T 1o12_A 28 FTGDVEIEEGKIVKVEK-----R--E-CI-PRGVLMPGFVDPHIHGVVGAD-TMN-CDFSEMEEFLYSQGVTTFLATTVS 96 (376)
T ss_dssp EEEEEEEETTEEEEEEE-----C--C-SC-CSSEEEECEEEEEECEETTEE-TTT-TCHHHHHHHHHTTTEEEEEEECCS
T ss_pred cCceEEEECCEEEEeCC-----C--c-cC-CCCEEccCeEEEeecCCCCCC-CCh-hhHHHHHHHHHhCCcEEEEeccCC
Confidence 68899999999999986 1 4 99 999999999999999976521 111 136677889999999999998643
No 65
>3mkv_A Putative amidohydrolase; sargasso SEA, structural genomics, protein structure initiat NEW YORK structural genomix research consortium, nysgxrc; HET: KCX; 2.40A {Undefined}
Probab=99.74 E-value=9.7e-17 Score=154.98 Aligned_cols=66 Identities=29% Similarity=0.514 Sum_probs=58.7
Q ss_pred CccEEEECcEEEcCCC---ceeeeEEEeCCeEEEeeCCCCCCCCceEEeCCCCEEeccccccccccccC
Q 014320 52 SSKILIKGGTVVNAHH---QQIADVYVEDGIVVAVQPNINVGDDVKVLDATGKFVMPGGIDPHTHLAME 117 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~---~~~~~i~i~~g~I~~vg~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~~ 117 (427)
|.+++|+|++|+|++. .++++|+|+||||++||+....+++.++||++|++|+|||||+|+|+...
T Consensus 3 M~~lli~ng~i~d~~~~~~~~~~dV~I~~G~I~~Ig~~~~~~~~~~vID~~G~~v~PGfID~H~H~~~~ 71 (426)
T 3mkv_A 3 LTTFLFRNGALLDPDHPDLLQGFEILIEDGFIREVSDKPIKSSNAHVIDVKGKTIMPGLIDLHVHVVAI 71 (426)
T ss_dssp CCEEEEEEEEECCTTSSSCEEEEEEEEETTEEEEEESSCCCCSSCEEEECTTCEEEECEEEEEECTTCC
T ss_pred cCcEEEECeEEEeCCCCcEecCcEEEEECCEEEEecCCCCCCCCCEEEECCCCEEEeChhhhhhCcccc
Confidence 5789999999999875 35789999999999999876666778999999999999999999998765
No 66
>3ggm_A Uncharacterized protein BT9727_2919; bacillus cereus group., structural genomics, PSI-2, protein structure initiative; 2.00A {Bacillus thuringiensis serovarkonkukian}
Probab=99.60 E-value=2.1e-15 Score=112.24 Aligned_cols=66 Identities=20% Similarity=0.387 Sum_probs=56.6
Q ss_pred CccEEEECcEEEcCCC--ceeeeEEEeCCeEEEeeCCCCC---CCCceEEeCCCCEEeccccccccccccC
Q 014320 52 SSKILIKGGTVVNAHH--QQIADVYVEDGIVVAVQPNINV---GDDVKVLDATGKFVMPGGIDPHTHLAME 117 (427)
Q Consensus 52 ~~~~~i~~~~i~~~~~--~~~~~i~i~~g~I~~vg~~~~~---~~~~~viD~~g~~v~PG~ID~H~H~~~~ 117 (427)
+.+++|+|++|++++. ...++|+|+||||++|++.... .++.++||++|++|+|||||+|+|+.++
T Consensus 3 ~~~~li~n~~i~~~~~~~~~~~~i~I~~g~I~~ig~~~~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~p 73 (81)
T 3ggm_A 3 VPDMILYNGKITTLDPSQPEVSAIAITDGLITAVGGDELLNSATEKTKKIDLKRKRAIPGLNDSHIHVIRG 73 (81)
T ss_dssp CCSEEEESSEEECSCTTCSEESEEEEETTEEEEEESGGGGGGCCTTCEEEECTTCEEEECCCCTTEEEECC
T ss_pred cCCEEEECCEEEeCCCCCccccEEEEECCEEEEEeCchHhcccCCCCEEEECCCCEEeeCeEeeeeCCCCc
Confidence 4678999999999765 3578999999999999986432 2456899999999999999999999988
No 67
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=99.45 E-value=2.1e-12 Score=120.50 Aligned_cols=255 Identities=14% Similarity=0.089 Sum_probs=136.4
Q ss_pred cccccccccccCcC--------CCCChhhHHHHHHHHHcCCceEEecCcCCCC-CcHHHHHHHHHHHhccccceece---
Q 014320 106 GGIDPHTHLAMEFM--------GSETIDDFFSGQAAALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAKNSCMDYGF--- 173 (427)
Q Consensus 106 G~ID~H~H~~~~~~--------g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--- 173 (427)
|+||+|+|+..... .....+......+.+.+.|||+++++..... .......+..++.+.+.+...++
T Consensus 6 G~iD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~~~~ 85 (291)
T 1bf6_A 6 GYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQD 85 (291)
T ss_dssp SEEEEEECSSEECHHHHTCGGGEECCHHHHHHHHHHHHHTTEEEEEECCCGGGTCCHHHHHHHHHHHCCEEEEEECCCCG
T ss_pred ceeeeccCeecCCcccccCCCcccCCHHHHHHHHHHHHHcCCCEEEecCCCcCCCCHHHHHHHHHhcCCeEEEeeccccC
Confidence 99999999974310 0112233444566778999999998864311 12332222222222222222233
Q ss_pred --eccc-cCCChhhH-HHHHHHHHHcCC-------CeEE-EEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhH
Q 014320 174 --HMAI-TKWDEVVS-DEMEVMVKEKGI-------NSFK-FFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAV 241 (427)
Q Consensus 174 --~~~~-~~~~~~~~-~~~~~l~~~~g~-------~~ik-~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~ 241 (427)
+... .....+.+ +.+.+.+ ..|+ ..++ +.+++........+.+++.++.|+++|++|.+|+++....
T Consensus 86 ~~hP~~~~~~~~~~l~~~~~~~l-~~gi~~~~~~~~~iGe~gld~~~~~~~~~~~~~~~~~~a~~~~~pv~iH~~~~~~~ 164 (291)
T 1bf6_A 86 AFFPEHVATRSVQELAQEMVDEI-EQGIDGTELKAGIIAEIGTSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTMG 164 (291)
T ss_dssp GGCCTHHHHSCHHHHHHHHHHHH-HTCSTTSSCCEEEEEEEECBTTBCCHHHHHHHHHHHHHHHHHCCCEEEECGGGCSH
T ss_pred ccCcHhhhcCCHHHHHHHHHHHH-HhccCCcCcceeeEEEEecCCCCCCHHHHHHHHHHHHHHHHHCCeEEEeCCCCCCh
Confidence 1100 01112222 2333333 2332 1332 2233221111123568889999999999999998642111
Q ss_pred HHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcC---CCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccc
Q 014320 242 FEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVN---TPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSG 318 (427)
Q Consensus 242 ~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g---~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~ 318 (427)
. +.+++.++.+ .++.+.|+......+.++++.+.|..+..+.+..
T Consensus 165 ~-------------------------------~~~~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~G~~i~~~~~~~- 212 (291)
T 1bf6_A 165 L-------------------------------EQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGK- 212 (291)
T ss_dssp H-------------------------------HHHHHHHHTTCCGGGEEECCCCSSCCHHHHHHHHHTTCEEEECCTTC-
T ss_pred H-------------------------------HHHHHHHHcCCCchhEEEECCCCCCCHHHHHHHHHCCCEEEEccCcc-
Confidence 1 1123333333 3678999954333577788888898777643310
Q ss_pred eeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcC--CceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHh
Q 014320 319 LVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATG--ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEER 396 (427)
Q Consensus 319 l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G--~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~ 396 (427)
. . .+| ...+.+.++++++.| ..+.++||. |+.... ....| .+....
T Consensus 213 -------~---------~---~~~--~~~~~~~~~~~~~~~~~dril~~TD~-p~~~~~---------~~~~~-~~~~~~ 260 (291)
T 1bf6_A 213 -------N---------S---YYP--DEKRIAMLHALRDRGLLNRVMLSMDI-TRRSHL---------KANGG-YGYDYL 260 (291)
T ss_dssp -------T---------T---TSC--HHHHHHHHHHHHHTTCGGGEEECCCC-CSGGGS---------GGGTS-CCTTHH
T ss_pred -------c---------C---CCC--HHHHHHHHHHHHHhCCCCeEEEcCCC-CCCccc---------hhcCC-CCHHHH
Confidence 0 0 022 123456788999988 456899996 552111 11123 333433
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 397 MHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 397 l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
++..+..+ ...+++.+++.++++.||+|+
T Consensus 261 ~~~~~~~l-~~~g~~~~~~~~~~~~N~~rl 289 (291)
T 1bf6_A 261 LTTFIPQL-RQSGFSQADVDVMLRENPSQF 289 (291)
T ss_dssp HHTHHHHH-HHTTCCHHHHHHHHTHHHHHH
T ss_pred HHHHHHHH-HHcCCCHHHHHHHHHHhHHHH
Confidence 44444333 345699999999999999985
No 68
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=99.17 E-value=3.3e-10 Score=106.76 Aligned_cols=263 Identities=13% Similarity=0.058 Sum_probs=131.3
Q ss_pred cccccccccccCcCCC--CC-h-----hhHH---HHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhccccceece
Q 014320 106 GGIDPHTHLAMEFMGS--ET-I-----DDFF---SGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGF 173 (427)
Q Consensus 106 G~ID~H~H~~~~~~g~--~~-~-----e~~~---~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 173 (427)
||||+|+|+....... .+ . ++.. .....+.+.|||++++....... ......+..++.+.+.+...++
T Consensus 17 G~iD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~ 96 (314)
T 2vc7_A 17 GFTLIHEHLRVFSEAVRQQWPHLYNEDEEFRNAVNEVKRAMQFGVKTIVDPTVMGLGRDIRFMEKVVKATGINLVAGTGI 96 (314)
T ss_dssp CSEESSCBSCBCCHHHHHHCGGGCCHHHHHHHHHHHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEECEEB
T ss_pred CCcccccccccCcchhcccCcchhhhcccHHHHHHHHHHHHHcCCCEEEecCCCCCCcCHHHHHHHHHHcCCeEEEEeec
Confidence 9999999997631010 00 1 1221 12356778999999988643222 3333333333332233334455
Q ss_pred ecccc--CC-ChhhHHHHHHHHH---HcCCC-------eEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecC-C-h
Q 014320 174 HMAIT--KW-DEVVSDEMEVMVK---EKGIN-------SFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE-N-G 238 (427)
Q Consensus 174 ~~~~~--~~-~~~~~~~~~~l~~---~~g~~-------~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e-~-~ 238 (427)
+.... .. .+...+++.+++. ..|+. .+++.+++........+.+++.++.|+++|++|.+|+. . .
T Consensus 97 hp~~~~~~~~~~~~~~~l~~~~~~~~~~gige~G~~~g~i~~~ld~~~~~~~q~~~~~~~~~lA~~~~~pv~iH~~~~~~ 176 (314)
T 2vc7_A 97 YIYIDLPFYFLNRSIDEIADLFIHDIKEGIQGTLNKAGFVKIAADEPGITKDVEKVIRAAAIANKETKVPIITHSNAHNN 176 (314)
T ss_dssp CCSSCCCGGGTTCCHHHHHHHHHHHHHTCSSSSSCCCCSEEEECCTTCSCHHHHHHHHHHHHHHHHHCCCEEEECCTTTT
T ss_pred CCCCCCchhhhccCHHHHHHHHHHHHHhhcccCCCCCCeEEEeecCCCCCHHHHHHHHHHHHHHHHHCCEEEEeCCCccc
Confidence 43211 11 1122444544432 12322 24555565432222235678899999999999999985 2 2
Q ss_pred hhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccc
Q 014320 239 DAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSG 318 (427)
Q Consensus 239 ~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~ 318 (427)
.. .+..+.+.+.|+. ..++.+.|+......+.++++.+.|..+..+.+..
T Consensus 177 ~~-~~~~~~l~~~~~~----------------------------~~~~~i~H~~~~~~~~~~~~~~~~G~~i~~~~~~~- 226 (314)
T 2vc7_A 177 TG-LEQQRILTEEGVD----------------------------PGKILIGHLGDTDNIDYIKKIADKGSFIGLDRYGL- 226 (314)
T ss_dssp HH-HHHHHHHHHTTCC----------------------------GGGEEETTGGGCCCHHHHHHHHHTTCEEEECCTTC-
T ss_pred Ch-HHHHHHHHHcCCC----------------------------cccEEEECCCCCCCHHHHHHHHHcCCEEEEeCCCc-
Confidence 21 1222222222211 12566889854222466778888887666532110
Q ss_pred eeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhc--CCceEEecCCCCCCh--hhhhcCCCCCccCCCCCc--h
Q 014320 319 LVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALAT--GILQLVGTDHCAFNS--TQKAFGIDDFRKIPNGVN--G 392 (427)
Q Consensus 319 l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~--G~~~~lgSD~~p~~~--~~~~~~~~~~~~~~~G~~--~ 392 (427)
. . .+ +.....+.+.+.+.. +..+.++||. |+.+ ... +++.. +.|-+ +
T Consensus 227 ~----------------~---~~--~~~~~~~~i~~~~~~g~~drilleTD~-~~~~~~~~~----~p~~~-~~g~~~~~ 279 (314)
T 2vc7_A 227 D----------------L---FL--PVDKRNETTLRLIKDGYSDKIMISHDY-CCTIDWGTA----KPEYK-PKLAPRWS 279 (314)
T ss_dssp T----------------T---TS--CHHHHHHHHHHHHHTTCTTTEEECCCC-BSSBCCGGG----CTTSH-HHHCTTCS
T ss_pred c----------------c---CC--CHHHHHHHHHHHHHcCCCCeEEEcCCc-ccccccccc----chhhh-hcCCCCcC
Confidence 0 0 00 001223456667775 4556999996 4321 000 01100 01111 2
Q ss_pred hhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 393 IEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 393 ~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
....++.....+ ...+++.+++.++++.||+|+
T Consensus 280 ~~~~~~~~~~~l-~~~g~~~e~~~~~~~~N~~rl 312 (314)
T 2vc7_A 280 ITLIFEDTIPFL-KRNGVNEEVIATIFKENPKKF 312 (314)
T ss_dssp TTHHHHTHHHHH-HHTTCCHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHH-HHcCCCHHHHHHHHHHCHHHH
Confidence 222233333222 345799999999999999985
No 69
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=99.13 E-value=1.8e-09 Score=102.30 Aligned_cols=270 Identities=13% Similarity=0.033 Sum_probs=133.5
Q ss_pred cccccccccccCcCCC--CC-h-----hhHHH----HHHHHHcCCceEEecCcCCCC-CcHHHHHHHHHHHhccccceec
Q 014320 106 GGIDPHTHLAMEFMGS--ET-I-----DDFFS----GQAAALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAKNSCMDYG 172 (427)
Q Consensus 106 G~ID~H~H~~~~~~g~--~~-~-----e~~~~----~~~~~l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 172 (427)
||||+|+|+....... .. . ++... ....+.+.|||++++.+.... .......+..++.+.+.+...+
T Consensus 16 GliD~H~HL~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~aGV~~iv~~~~~~~~~~~~~~~~la~~~~~~i~~~~G 95 (330)
T 2ob3_A 16 GFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADVHIVAATG 95 (330)
T ss_dssp CSEEEEECSEECCTTHHHHCGGGGSCHHHHHHHHHHHHHHHHHTTCCEEEECCCGGGTCCHHHHHHHHHHHTCEEECEEE
T ss_pred CCceeeeCeecCCchhccCCCchhhhccCHHHHHHHHHHHHHHcCCCEEEeCCCCCcCCCHHHHHHHHHHhCCcEEEEec
Confidence 9999999997631110 00 1 22222 256678899999999864211 2233333322222223444556
Q ss_pred eec--cc-c-CCChhhH-HHHHHHHHH----c--CCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecC--Chh
Q 014320 173 FHM--AI-T-KWDEVVS-DEMEVMVKE----K--GINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE--NGD 239 (427)
Q Consensus 173 ~~~--~~-~-~~~~~~~-~~~~~l~~~----~--g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e--~~~ 239 (427)
+|. +. . ....+.+ +.+.+.+.. . .+..+++.++ ........+.+++.++.|++.|+||.+|+. +.+
T Consensus 96 ~hp~~p~~~~~~~~~~l~~~l~~~~~~gi~~~~~k~~aiEiGld-~~~~~~q~~~f~~q~~lA~~~glPv~iH~~~~~r~ 174 (330)
T 2ob3_A 96 LWFDPPLSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIKVATT-GKATPFQELVLKAAARASLATGVPVTTHTAASQRD 174 (330)
T ss_dssp CCSCCCHHHHTCCHHHHHHHHHHHHHTCSTTSCCCCSEEEEECS-SSCCHHHHHHHHHHHHHHHHHCCCEEEECCGGGTH
T ss_pred CCcCCCchhccCCHHHHHHHHHHHHHhhccccccceeEEEEeCC-CCCCHHHHHHHHHHHHHHHHhCCeEEEECCCCCCC
Confidence 652 11 1 1112222 223333211 1 3455677666 211111223488889999999999999985 232
Q ss_pred hHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCC---CEEEEcCC-CHHHHHHHHHHhhcCCCEEEecC
Q 014320 240 AVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNT---PLYVVHVM-SMDAMEEIAKARKAGQRVIGEPV 315 (427)
Q Consensus 240 ~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~---~~~i~H~~-~~~~~~~i~~~~~~G~~v~~~~~ 315 (427)
.. +.. ++.++.+. ++.+.|+. +.+ .+..+++.+.|..+.....
T Consensus 175 a~-e~l-------------------------------~iL~~~g~~~~~~~i~H~f~~~~-~e~a~~~~~~G~~i~~~~~ 221 (330)
T 2ob3_A 175 GE-QQA-------------------------------AIFESEGLSPSRVCIGHSDDTDD-LSYLTALAARGYLIGLDHI 221 (330)
T ss_dssp HH-HHH-------------------------------HHHHHTTCCGGGEEECSGGGCCC-HHHHHHHHHTTCEEEECCT
T ss_pred HH-HHH-------------------------------HHHHHcCcCcccEEEeCCCCCCC-HHHHHHHHhCCCEEEeCCC
Confidence 22 222 22233332 44688986 443 4778888889977665421
Q ss_pred ccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcC--CceEEecCCCCC-Chh-----hhhcCCCCCccCC
Q 014320 316 VSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATG--ILQLVGTDHCAF-NST-----QKAFGIDDFRKIP 387 (427)
Q Consensus 316 p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G--~~~~lgSD~~p~-~~~-----~~~~~~~~~~~~~ 387 (427)
. ...+..... .+... .. ..++ .....+.+.++++.| ..+.++||. |+ ... .+..+ .+.|
T Consensus 222 G-~~tf~~~~~-~~~~~--~~--~~~~--~~~~~~~l~~~~~~~p~drilleTD~-p~~l~~~~~~~g~~~~----~n~p 288 (330)
T 2ob3_A 222 P-YSAIGLEDN-ASASA--LL--GIRS--WQTRALLIKALIDQGYMKQILVSNDW-TFGFSSYVTNIMDVMD----RVNP 288 (330)
T ss_dssp T-CCCTTCTTC-HHHHH--HH--CSSC--HHHHHHHHHHHHHTTCGGGEEECCCC-CSEECSSSTTHHHHHH----HHCT
T ss_pred c-ccccccccc-ccccc--cc--cCCC--HHHHHHHHHHHHHhCCCCeEEEeCCC-CCCcccccccCCCccc----ccCC
Confidence 1 111100000 00000 00 0011 012235688899998 667999995 54 110 00000 0001
Q ss_pred CCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 388 NGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 388 ~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
. +....+......+.+ .+++++++.+++|.||+|+
T Consensus 289 n---~~~~~~~~~ia~l~~-~G~~~eev~~~~t~N~~rl 323 (330)
T 2ob3_A 289 D---GMAFIPLRVIPFLRE-KGVPQETLAGITVTNPARF 323 (330)
T ss_dssp T---GGGHHHHTHHHHHHH-TTCCHHHHHHHHTHHHHHH
T ss_pred C---CcchHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHH
Confidence 0 111112222222333 5799999999999999985
No 70
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=99.00 E-value=1.8e-08 Score=92.10 Aligned_cols=240 Identities=16% Similarity=0.088 Sum_probs=126.2
Q ss_pred ccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceecccc-CCChhhH
Q 014320 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAIT-KWDEVVS 185 (427)
Q Consensus 107 ~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 185 (427)
+||+|+|+..... ..+.......+.+.||+++++.+... ....... ...+..+.....++++.... ...++.+
T Consensus 5 ~iD~H~Hl~~~~~----~~~~~~~l~~~~~~Gv~~~v~~~~~~-~~~~~~~-~l~~~~~~~~~~~G~hP~~~~~~~~~~~ 78 (259)
T 1zzm_A 5 FIDTHCHFDFPPF----SGDEEASLQRAAQAGVGKIIVPATEA-ENFARVL-ALAENYQPLYAALGLHPGMLEKHSDVSL 78 (259)
T ss_dssp EEESCBCTTSTTT----TTCHHHHHHHHHHTTEEEEEEECCSG-GGHHHHH-HHHHHCTTEEEEECCCGGGGGGCCHHHH
T ss_pred EEEeeecCCchhh----ccCHHHHHHHHHHcCCCEEEEecCCH-HHHHHHH-HHHHhCCCeEEEEEecccccccCCHHHH
Confidence 8999999976411 12233335667889999998764321 1222222 22222233223344443221 2234456
Q ss_pred HHHHHHHHH--cCCCeE-EEEEecCCCc---cCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccc
Q 014320 186 DEMEVMVKE--KGINSF-KFFMAYKGSF---MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (427)
Q Consensus 186 ~~~~~l~~~--~g~~~i-k~~~~~~~~~---~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~ 259 (427)
+++++++.. .++.++ .+.++++... ....+.++..++.|+++|+||.+|+.+.. ...
T Consensus 79 ~~l~~~~~~~~~~~~~iGEiGld~~~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~~~a~--~~~--------------- 141 (259)
T 1zzm_A 79 EQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRRTH--DKL--------------- 141 (259)
T ss_dssp HHHHHHHHHCCSSEEEEEEEEEECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEEESCH--HHH---------------
T ss_pred HHHHHHHhcCCCCEEEEEEeccCCCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEecccH--HHH---------------
Confidence 777777644 344444 3344543211 12245788999999999999999984321 111
Q ss_pred cccCCHHHHHHHHHHHHHHHHhcC--CCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCcee
Q 014320 260 ALSRPPLLEGEATTRAIRLAEFVN--TPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKY 337 (427)
Q Consensus 260 ~~~~p~~~e~~a~~~~~~~~~~~g--~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~ 337 (427)
+++.++.+ .+. +.|+.+.. .+.++++.+.|+.+.. .+... +
T Consensus 142 ----------------~~il~~~~~~~~~-i~H~~~g~-~~~~~~~~~~g~~i~~--~g~~~-~---------------- 184 (259)
T 1zzm_A 142 ----------------AMHLKRHDLPRTG-VVHGFSGS-LQQAERFVQLGYKIGV--GGTIT-Y---------------- 184 (259)
T ss_dssp ----------------HHHHHHHCCTTCE-EETTCCSC-HHHHHHHHHTTCEEEE--CGGGG-C----------------
T ss_pred ----------------HHHHHhcCCCCCE-EEEcCCCC-HHHHHHHHHCCCEEEE--Cceee-c----------------
Confidence 12222222 234 45986543 3556666677755443 22100 0
Q ss_pred EEcCCCCCcccHHHHHHHHhcC--CceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHH
Q 014320 338 VMSPPIRASGHNKALQAALATG--ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDY 415 (427)
Q Consensus 338 ~~~pplr~~~~~~~l~~~l~~G--~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~ 415 (427)
+ +.. .++++++.. ..+.++||. |+..... ..|-.+....++..+..+.+..+++.+++
T Consensus 185 ---~--~~~----~~~~~~~~~~~dril~eTD~-P~~~p~~----------~~g~~~~p~~l~~~~~~la~~~g~~~e~~ 244 (259)
T 1zzm_A 185 ---P--RAS----KTRDVIAKLPLASLLLETDA-PDMPLNG----------FQGQPNRPEQAARVFAVLCELRREPADEI 244 (259)
T ss_dssp ---T--TTC----SHHHHHHHSCGGGEEECCCB-TSSCCTT----------CTTSCCCGGGHHHHHHHHHHHCSSCHHHH
T ss_pred ---c--ccH----HHHHHHHhCCHHHEEEecCC-CCccCCC----------CCCCCCcHHHHHHHHHHHHHHHCcCHHHH
Confidence 0 000 133344332 467999996 6542211 01211112234444434444567999999
Q ss_pred HHHHchhhhcC
Q 014320 416 VRLTSTEWGRL 426 (427)
Q Consensus 416 v~~~t~npA~~ 426 (427)
.+.++.|++|+
T Consensus 245 ~~~~~~Na~rl 255 (259)
T 1zzm_A 245 AQALLNNTYTL 255 (259)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999985
No 71
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=98.83 E-value=9.2e-08 Score=88.31 Aligned_cols=245 Identities=13% Similarity=0.083 Sum_probs=134.0
Q ss_pred ccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhcc----ccceeceecccc-CCC
Q 014320 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKN----SCMDYGFHMAIT-KWD 181 (427)
Q Consensus 107 ~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~ 181 (427)
|||+|+|+....+ .++.......+...||..++..+... ......++ +.+..+. .+..+|+|.... ...
T Consensus 3 ~iD~H~HL~~~~~----~~d~~~vl~~a~~~gV~~~v~~g~~~-~~~~~~~~-la~~~~~~~~~v~~~~GiHP~~~~~~~ 76 (287)
T 3rcm_A 3 LIDIGVNLTNSSF----HDQQAAIVERALEAGVTQMLLTGTSL-AVSEQALE-LCQQLDASGAHLFATAGVHPHDAKAWD 76 (287)
T ss_dssp EEEEEECTTCGGG----TTCHHHHHHHHHHTTEEEEEECCCSH-HHHHHHHH-HHHHHCTTSSSEEEEECCCGGGGGGCC
T ss_pred eEEEeecCCchhc----ccCHHHHHHHHHHcCCeEEEEecCCH-HHHHHHHH-HHHhCCCCCceEEEEEEECcCccccCC
Confidence 8999999976411 22344446778889999988653211 11222222 2222222 344556554322 223
Q ss_pred hhhHHHHHHHHHHcCCCeEE-EEEecCCCc---cCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcc
Q 014320 182 EVVSDEMEVMVKEKGINSFK-FFMAYKGSF---MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPE 257 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik-~~~~~~~~~---~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~ 257 (427)
++.++.++++++...+..|. +.+++.... ....+.+++.++.|+++++||.+|+.+. ....
T Consensus 77 ~~~~~~l~~l~~~~~vvaIGEiGLD~~~~~~~~~~Q~~~F~~ql~lA~e~~lPv~iH~r~a--~~~~------------- 141 (287)
T 3rcm_A 77 TDSERQLRLLLSEPRVRAVGECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLHERDA--SERL------------- 141 (287)
T ss_dssp TTHHHHHHHHHTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESC--HHHH-------------
T ss_pred HHHHHHHHHHhcCCCeEEEEEeeeCCCcccCcHHHHHHHHHHHHHHHHHhCCCEEEEcCCc--HHHH-------------
Confidence 45677788777444455665 345654211 1135678899999999999999998532 1111
Q ss_pred cccccCCHHHHHHHHHHHHHHHHhcC---CCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccC
Q 014320 258 GHALSRPPLLEGEATTRAIRLAEFVN---TPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTA 334 (427)
Q Consensus 258 ~~~~~~p~~~e~~a~~~~~~~~~~~g---~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~ 334 (427)
+++.++.+ .+. +.|+.+.. .+.++++.+.|..+.. ... +.+
T Consensus 142 ------------------l~il~~~~~~~~~~-V~H~fsG~-~e~a~~~l~~G~yis~--~g~-i~~------------- 185 (287)
T 3rcm_A 142 ------------------LAILKDYRDHLTGA-VVHCFTGE-REALFAYLDLDLHIGI--TGW-ICD------------- 185 (287)
T ss_dssp ------------------HHHHHTTGGGCSCE-EECSCCCC-HHHHHHHHHTTCEEEE--CGG-GGC-------------
T ss_pred ------------------HHHHHHcCCCCCeE-EEEeCCCC-HHHHHHHHHCCcEEEE--Cch-hcc-------------
Confidence 12222221 233 56885543 4667777777865553 211 100
Q ss_pred ceeEEcCCCCCcccHHHHHHHHhcC--CceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCH
Q 014320 335 AKYVMSPPIRASGHNKALQAALATG--ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISV 412 (427)
Q Consensus 335 ~~~~~~pplr~~~~~~~l~~~l~~G--~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l 412 (427)
.-|. +.+++.++.- ..+.+.||. |+.... ++...+.|-.+-...++..+..+.+..+++.
T Consensus 186 -------~k~~----~~l~~~v~~ip~drlLlETD~-P~l~p~------~~~~~~rg~~n~P~~l~~v~~~lA~~~g~s~ 247 (287)
T 3rcm_A 186 -------ERRG----THLHPLVGNIPEGRLMLESDA-PYLLPR------SLRPKPKSGRNEPAFLPEVLREVALHRGESA 247 (287)
T ss_dssp -------TTTC----GGGHHHHTTSCTTSEEECCCT-TSCCCT------TCSSCCTTCCCCGGGHHHHHHHHHHHHTSCH
T ss_pred -------ccCH----HHHHHHHHhcCCccEEEeccC-CccCcc------ccccccCCCcCCHHHHHHHHHHHHHHhCcCH
Confidence 0001 1133444432 468999995 664321 1101113443444456665544444567999
Q ss_pred HHHHHHHchhhhcC
Q 014320 413 TDYVRLTSTEWGRL 426 (427)
Q Consensus 413 ~~~v~~~t~npA~~ 426 (427)
+++.+.++.|+.|+
T Consensus 248 eev~~~~~~N~~rl 261 (287)
T 3rcm_A 248 EHTAAHTTATARDF 261 (287)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999875
No 72
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=98.77 E-value=5.2e-07 Score=86.09 Aligned_cols=244 Identities=13% Similarity=0.048 Sum_probs=123.2
Q ss_pred HHHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhccccceeceecccc--C-CChhhHHHHHHHHHH---cC----
Q 014320 128 FSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAIT--K-WDEVVSDEMEVMVKE---KG---- 196 (427)
Q Consensus 128 ~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~l~~~---~g---- 196 (427)
....+.+.+.||+++++....... ......+..++.+.+.+...|++.... . ..+...+++.++... .|
T Consensus 89 ~~~l~~~~~aGv~tiV~~t~~g~gr~~~~l~~la~~~gv~i~~~tG~y~~~~~P~~~~~~~~~~L~~~~~~ei~~Gi~~~ 168 (364)
T 3k2g_A 89 IAEVKQFAAVGGRSIVDPTCRGIGRDPVKLRRISAETGVQVVMGAGYYLASSMPETAARLSADDIADEIVAEALEGTDGT 168 (364)
T ss_dssp HHHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEECCSBCCGGGCCGGGGTCCHHHHHHHHHHHHHTCBTTB
T ss_pred HHHHHHHHhcCCCeEEEeCCCcccCCHHHHHHHHHHhCCcEEEEeCccCCCCCchhhccCCHHHHHHHHHHHHHhccccC
Confidence 344566788999999998633222 333333323333224444455552111 1 011123444433211 22
Q ss_pred ---CCeE-EEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCCh-hhHHHHHHHHHHcCCCCcccccccCCHHHHHHH
Q 014320 197 ---INSF-KFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG-DAVFEGQKRMIELGITGPEGHALSRPPLLEGEA 271 (427)
Q Consensus 197 ---~~~i-k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~-~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a 271 (427)
+..| ++.+++ .......+.+++.++.|++.|+||.+|+.+. +...+..+.+.+.|..
T Consensus 169 ~vkag~IGEiGld~-~~t~~q~~~f~aq~~~A~~~glPV~iH~~gr~~a~~e~l~iL~e~g~~----------------- 230 (364)
T 3k2g_A 169 DARIGLIGEIGVSS-DFTAEEEKSLRGAARAQVRTGLPLMVHLPGWFRLAHRVLDLVEEEGAD----------------- 230 (364)
T ss_dssp SCCCSSEEEEECCT-TCCHHHHHHHHHHHHHHHHHCCCEEEECCTTSCCHHHHHHHHHHTTCC-----------------
T ss_pred CcceeEEEEEEcCC-CCCHHHHHHHHHHHHHHHHHCCeEEEecCCCCccHHHHHHHHHHcCCC-----------------
Confidence 2235 344554 1111224568888999999999999998422 2222222222222211
Q ss_pred HHHHHHHHHhcCCCEEEEcCCC-HHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHH
Q 014320 272 TTRAIRLAEFVNTPLYVVHVMS-MDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNK 350 (427)
Q Consensus 272 ~~~~~~~~~~~g~~~~i~H~~~-~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~ 350 (427)
..++.+.|+.. ....+..+++.+.|..+..+..-...++-.. .. ..|. .....+
T Consensus 231 -----------~~~vvi~H~~~s~~~~e~a~~~l~~G~~I~f~g~gt~~~f~~~-----------~~-~~~~--d~~ra~ 285 (364)
T 3k2g_A 231 -----------LRHTVLCHMNPSHMDPVYQATLAQRGAFLEFDMIGMDFFYADQ-----------GV-QCPS--DDEVAR 285 (364)
T ss_dssp -----------GGGEEECCCGGGTTCHHHHHHHHHHTCEEEECCTTCCCEETTT-----------TE-ECCC--HHHHHH
T ss_pred -----------CCceEEECCCCCCCCHHHHHHHHhCCcEEEecCCccccccccc-----------cc-cccc--HHHHHH
Confidence 02366789973 3246778888888976655322110001000 00 0010 011346
Q ss_pred HHHHHHhcCC--ceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 351 ALQAALATGI--LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 351 ~l~~~l~~G~--~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
.+.++++.|- .+.++||. |.....+.. .| .+....+.... ..+...+++.+++.+++|.||+|+
T Consensus 286 ~l~~lv~~gp~drilleTD~-p~~~~~~~~---------gg-~~~~~l~~~~~-~~l~~~Gis~eei~~~~~~Np~rl 351 (364)
T 3k2g_A 286 AILGLADHGYLDRILLSHDV-FVKMMLTRY---------GG-NGYAFVTKHFL-PRLRRHGLDDAALETLMVTNPRRV 351 (364)
T ss_dssp HHHHHHHTTCGGGEEECCCC-CSGGGSGGG---------TS-CTTSHHHHHHH-HHHHHTTCCHHHHHHHHTHHHHHH
T ss_pred HHHHHHHhCCcccEEEeCCC-CCCCCCCCC---------CC-CCcchHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHH
Confidence 6888888884 68999995 543222111 12 22222222222 122346799999999999999985
No 73
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=98.76 E-value=1.3e-06 Score=80.11 Aligned_cols=237 Identities=15% Similarity=0.077 Sum_probs=124.2
Q ss_pred cccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhc-cccceeceeccc-cC----
Q 014320 106 GGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK-NSCMDYGFHMAI-TK---- 179 (427)
Q Consensus 106 G~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~---- 179 (427)
++||+|+|+..... ..+.......+...||+++++.+... .......+ ..+..+ +....++++... ..
T Consensus 5 ~~iD~H~Hl~~~~~----~~~~~~~l~~~~~~Gv~~~v~~~~~~-~~~~~~~~-l~~~~~~~i~~~~GihP~~~~~~~~~ 78 (272)
T 2y1h_A 5 GLVDCHCHLSAPDF----DRDLDDVLEKAKKANVVALVAVAEHS-GEFEKIMQ-LSERYNGFVLPCLGVHPVQGLPPEDQ 78 (272)
T ss_dssp CEEEEEECTTSGGG----TTTHHHHHHHHHHTTEEEEEECCSSG-GGHHHHHH-HHHHTTTTEEEEECCCSBC-------
T ss_pred cEEEEeeCCCchhh----hcCHHHHHHHHHHCCCCEEEEeCCCH-HHHHHHHH-HHHHCCCCEEEEEEECCCcccccccc
Confidence 59999999976411 12333335667889999999875321 12222222 222222 233344554322 11
Q ss_pred --CChhhHHHHHHHHHH--cCCCeEEE-EEecCCCc-------cCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHH
Q 014320 180 --WDEVVSDEMEVMVKE--KGINSFKF-FMAYKGSF-------MINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKR 247 (427)
Q Consensus 180 --~~~~~~~~~~~l~~~--~g~~~ik~-~~~~~~~~-------~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~ 247 (427)
...+.++++.+++.. ..+..++. .++++... ....+.++..++.|+++|+||.+|+.+.. ...
T Consensus 79 ~~~~~~~~~~l~~~~~~~~~~~~~iGE~Gld~~~~~~~~~~~~~~q~~~f~~~~~la~~~~lPv~iH~~~a~--~~~--- 153 (272)
T 2y1h_A 79 RSVTLKDLDVALPIIENYKDRLLAIGEVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAG--RPT--- 153 (272)
T ss_dssp CBCCHHHHHHHHHHHHHHGGGCSEEEEEECCCCTTTCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEECTTCH--HHH---
T ss_pred ccCCHHHHHHHHHHHHhCCCCEEEEEeccCCCccccCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCcH--HHH---
Confidence 123445666666632 34556643 34431111 11245788999999999999999985421 111
Q ss_pred HHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcC-CCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccc
Q 014320 248 MIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVN-TPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWL 326 (427)
Q Consensus 248 l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g-~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~ 326 (427)
+++.++.+ .++.+ |+.... .+.++++.+.|+.+.. .+...
T Consensus 154 ----------------------------~~il~~~~~~~~v~-H~~~g~-~~~~~~~~~~g~~i~~--~g~~~------- 194 (272)
T 2y1h_A 154 ----------------------------INLLQEQGAEKVLL-HAFDGR-PSVAMEGVRAGYFFSI--PPSII------- 194 (272)
T ss_dssp ----------------------------HHHHHHTTCCSEEE-ETCCSC-HHHHHHHHHTTCEEEE--CGGGG-------
T ss_pred ----------------------------HHHHHhCCCCCEEE-EccCCC-HHHHHHHHHCCCEEEE--CCccc-------
Confidence 12222332 35545 885543 3666777777754443 32100
Q ss_pred cCCCcccCceeEEcCCCCCcccHHHHHHHHhcC--CceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHH
Q 014320 327 WHSDFVTAAKYVMSPPIRASGHNKALQAALATG--ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTM 404 (427)
Q Consensus 327 ~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G--~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~ 404 (427)
... .+++.++.. ..+.++||. |+....+ |-.+....++..+..+
T Consensus 195 -----------------~~~----~~~~~~~~~~~drll~eTD~-P~~~p~~------------g~~~~p~~l~~~~~~l 240 (272)
T 2y1h_A 195 -----------------RSG----QKQKLVKQLPLTSICLETDS-PALGPEK------------QVRNEPWNISISAEYI 240 (272)
T ss_dssp -----------------TCH----HHHHHHHHSCGGGEEECCCT-TSSCSST------------TSCCCGGGHHHHHHHH
T ss_pred -----------------CcH----HHHHHHHhCCHHHEEEecCC-CCCCCCC------------CCcCcHHHHHHHHHHH
Confidence 011 244444432 356999996 6432111 1111111233333223
Q ss_pred HhcCCCCHHHHHHHHchhhhcC
Q 014320 405 VESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 405 ~~~~~l~l~~~v~~~t~npA~~ 426 (427)
.+..+++.+++.+.++.||+|+
T Consensus 241 a~~~g~~~e~~~~~~~~N~~~l 262 (272)
T 2y1h_A 241 AQVKGISVEEVIEVTTQNALKL 262 (272)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHH
T ss_pred HHHHCcCHHHHHHHHHHHHHHH
Confidence 2334799999999999999975
No 74
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=98.76 E-value=1.1e-07 Score=89.49 Aligned_cols=261 Identities=15% Similarity=0.106 Sum_probs=133.4
Q ss_pred cccccccccccCcC----------CCCChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHH-HHHhccccceecee
Q 014320 106 GGIDPHTHLAMEFM----------GSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAY-EKKAKNSCMDYGFH 174 (427)
Q Consensus 106 G~ID~H~H~~~~~~----------g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 174 (427)
|++.+|=|+..... ...+.+......+...+.|++|++|+...........+++. ++.+.+....-+++
T Consensus 17 G~t~~HEHl~~~~~~~~~~~~~~~~l~~~~~~~~el~~~~~~G~~tiVd~t~~~~gR~~~~l~~is~~tgv~iv~~TG~y 96 (330)
T 3pnz_A 17 GFTYSHEHIVCVPAYWQERDADDLLLDDKEKSQLDVQDFADLGGKTIVDATAVDYGRRVLDVAQISKETGIQIVGTAGFN 96 (330)
T ss_dssp CSEEEEECCSBCCHHHHTTTCGGGCBCCHHHHHHHHHHHHHTTCCEEEECCCGGGCBCHHHHHHHHHHHCCEEEEEEECC
T ss_pred CCceeccCceecChhhhhcCCCcccccCHHHHHHHHHHHHHhCCCEEEECCCCccccCHHHHHHHHHHhCCEEEEeCCCC
Confidence 77888888754210 01122333445666778999999998644333222233333 33333333333443
Q ss_pred cccc--------------------CC----C-hhhHHHHHHHHHHcCC-----C--eEEEEEecCCCccCCHHHHHHHHH
Q 014320 175 MAIT--------------------KW----D-EVVSDEMEVMVKEKGI-----N--SFKFFMAYKGSFMINDELLIEGFK 222 (427)
Q Consensus 175 ~~~~--------------------~~----~-~~~~~~~~~l~~~~g~-----~--~ik~~~~~~~~~~~~~~~l~~~~~ 222 (427)
.... .+ . ++..+.+.+-+ ..|+ . .+++.++++.......+.+++.++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~ei-~~Gi~~t~vkaGvIEiGld~~~~~~~q~~~f~aq~~ 175 (330)
T 3pnz_A 97 KSFLWDGKIKPELKPIIGDFETYYEWIENTTTDKLTEFVVNEV-ENGLEGTPYKAGQVKFGTGYNMITPLEEKTIRAVAR 175 (330)
T ss_dssp CGGGGGSBCCGGGHHHHCSCSBHHHHHHTSCHHHHHHHHHHHH-HTCSTTSSCCEEEEEEECBTTBCCHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccCchhhccCCHHHHHHHHHHHH-HhhCCCcCcCcCeEEEEcCCCCCCHHHHHHHHHHHH
Confidence 2110 00 1 11112222222 2333 2 267777765332233567889999
Q ss_pred HHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCC-CHHHHHHHH
Q 014320 223 RCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM-SMDAMEEIA 301 (427)
Q Consensus 223 ~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~-~~~~~~~i~ 301 (427)
.|++.|+||.+|+.......+..+.+++.|.. ..++.+.|+. +. +.+..+
T Consensus 176 ~A~~~glPViiH~r~g~~a~~~l~iL~e~~~~----------------------------~~~vvi~H~~~s~-~~e~a~ 226 (330)
T 3pnz_A 176 AHHETKAPIHSHTEAGTMALEQIEILKQENIP----------------------------LEYLSIGHMDRNL-DPYYHK 226 (330)
T ss_dssp HHHHHCCCEEEECGGGCCHHHHHHHHHHTTCC----------------------------GGGEEETTGGGSC-CHHHHH
T ss_pred HHHHHCCeEEEeCCCCcChHHHHHHHHHcCCC----------------------------CCeEEEecCCCCC-CHHHHH
Confidence 99999999999985321111112222222211 1246678985 43 356777
Q ss_pred HHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCC--ceEEecCCCCCChhhhhcC
Q 014320 302 KARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGI--LQLVGTDHCAFNSTQKAFG 379 (427)
Q Consensus 302 ~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~--~~~lgSD~~p~~~~~~~~~ 379 (427)
++.+.|..+..+.... ++ .+| .....+.+.+.++.|. .+.++||. |.....+-.+
T Consensus 227 ~~l~~G~~i~~~g~~t-------------------~~-~~~--~~~~~~~l~~lv~~g~~drilleTD~-p~~~~~~~~G 283 (330)
T 3pnz_A 227 QVAKTGAFMSFDGIAK-------------------IK-YAP--ESARIAAILYLVSEGFEDQILVSGDT-ARKTYYKHYG 283 (330)
T ss_dssp HHHTTTCEEEECCTTC-------------------TT-TCC--HHHHHHHHHHHHHTTCGGGEEECCCC-CSGGGSHHHH
T ss_pred HHHHcCcEEEEccCcc-------------------cC-CCC--hHHHHHHHHHHHHcCCCCeEEEeCCC-CCCCCCCccC
Confidence 7778886655422110 00 001 0112345777887774 68999995 5422211110
Q ss_pred CCCCccCCCCCchh-hHhHHHHHHHHHhcCCCCHHH-HHHHHchhhhcC
Q 014320 380 IDDFRKIPNGVNGI-EERMHLVWDTMVESGQISVTD-YVRLTSTEWGRL 426 (427)
Q Consensus 380 ~~~~~~~~~G~~~~-e~~l~~~~~~~~~~~~l~l~~-~v~~~t~npA~~ 426 (427)
..+|..-+ ....|.+. ..++..+++.++ +.++++.||+|+
T Consensus 284 ------~~~~~~~~~~~~~~~l~-~~a~~~Gis~ee~i~~~t~~Np~rl 325 (330)
T 3pnz_A 284 ------HGPGLEYIAKKWVPRFI-DEANEKGFDGEKLVKKFFVDNPARC 325 (330)
T ss_dssp ------CCSTTTHHHHTHHHHHH-HHHHHTTSCHHHHHHHHHTHHHHHH
T ss_pred ------CCCCcchHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHhHHHH
Confidence 01233222 12223221 113457899998 999999999985
No 75
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=98.69 E-value=9.6e-07 Score=80.67 Aligned_cols=245 Identities=12% Similarity=0.076 Sum_probs=123.0
Q ss_pred ccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceecccc-CCChhhH
Q 014320 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAIT-KWDEVVS 185 (427)
Q Consensus 107 ~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 185 (427)
+||+|+|+..... ..+.......+...||+++++..... ......++ ..+..+.....++++.... ...++.+
T Consensus 5 ~iD~H~Hl~~~~~----~~~~~~~l~~~~~~Gv~~~v~~~~~~-~~~~~~~~-l~~~~~~i~~~~G~hP~~~~~~~~~~~ 78 (264)
T 1xwy_A 5 MFDIGVNLTSSQF----AKDRDDVVACAFDAGVNGLLITGTNL-RESQQAQK-LARQYSSCWSTAGVHPHDSSQWQAATE 78 (264)
T ss_dssp CEEEEECTTSGGG----TTTHHHHHHHHHHTTCCEEEECCCSH-HHHHHHHH-HHHHSTTEEEEECCCGGGGGGCCHHHH
T ss_pred EEEEeeCCCChhh----ccCHHHHHHHHHHCCCCEEEEeCCCH-HHHHHHHH-HHHhCCCEEEEEEECCcccccCCHHHH
Confidence 8999999976411 12233335667889999988764311 11111111 1111122222333332211 2223456
Q ss_pred HHHHHHHHHcCCCeEEE-EEecCCCcc---CCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccc
Q 014320 186 DEMEVMVKEKGINSFKF-FMAYKGSFM---INDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHAL 261 (427)
Q Consensus 186 ~~~~~l~~~~g~~~ik~-~~~~~~~~~---~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~ 261 (427)
++++++++..++.+++. .+++..... ...+.++..++.|+++|+||.+|+.+. ....
T Consensus 79 ~~l~~~~~~~~~~~iGE~Gld~~~~~~~~~~q~~~f~~~l~~a~~~~lpv~iH~~~a--~~~~----------------- 139 (264)
T 1xwy_A 79 EAIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFMHCRDA--HERF----------------- 139 (264)
T ss_dssp HHHHHHHTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESC--HHHH-----------------
T ss_pred HHHHHHhcCCCeEEEEEeccCCCCCCCcHHHHHHHHHHHHHHHHHhCCcEEEEcCCc--hHHH-----------------
Confidence 67777663334445543 345432111 112458899999999999999998432 1111
Q ss_pred cCCHHHHHHHHHHHHHHHHhc---CCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeE
Q 014320 262 SRPPLLEGEATTRAIRLAEFV---NTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYV 338 (427)
Q Consensus 262 ~~p~~~e~~a~~~~~~~~~~~---g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~ 338 (427)
+++.++. ..++ +.|+.+.. .+.++.+.+.|+.+.. +.. +. .
T Consensus 140 --------------~~il~~~~~~~~~~-v~H~~~g~-~~~~~~~~~~g~yi~~--~g~-~~---------~-------- 183 (264)
T 1xwy_A 140 --------------MTLLEPWLDKLPGA-VLHCFTGT-REEMQACVAHGIYIGI--TGW-VC---------D-------- 183 (264)
T ss_dssp --------------HHHHGGGGGGSSCE-EECSCCCC-HHHHHHHHHTTCEEEE--CGG-GG---------C--------
T ss_pred --------------HHHHHhcCCCCCcE-EEEccCCC-HHHHHHHHHCCeEEEE--Ccc-cc---------C--------
Confidence 1222222 2455 44975433 3556666666754433 311 00 0
Q ss_pred EcCCCCCcccHHHHHHHHhcC--CceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHH
Q 014320 339 MSPPIRASGHNKALQAALATG--ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYV 416 (427)
Q Consensus 339 ~~pplr~~~~~~~l~~~l~~G--~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v 416 (427)
.+ ..+.+++.++.. ..+.++||. |+....+.. + ...|-.+....++.....+.+..+++.+++.
T Consensus 184 ----~~---~~~~l~~~~~~~~~drll~eTD~-P~~~~~~~~---~---~~~g~~n~p~~~~~~~~~~a~~~g~~~e~~~ 249 (264)
T 1xwy_A 184 ----ER---RGLELRELLPLIPAEKLLIETDA-PYLLPRDLT---P---KPSSRRNEPAHLPHILQRIAHWRGEDAAWLA 249 (264)
T ss_dssp ----TT---TSHHHHHHGGGSCGGGEEECCCT-TSCCCTTCT---T---CCCSSCCCGGGHHHHHHHHHHHHTCCHHHHH
T ss_pred ----Cc---CcHHHHHHHHhCCHHHEEEecCC-CCcCccccc---c---ccCCCCCchHHHHHHHHHHHHHHCcCHHHHH
Confidence 00 012355566543 368999996 653211000 0 0012111112333333233233479999999
Q ss_pred HHHchhhhcC
Q 014320 417 RLTSTEWGRL 426 (427)
Q Consensus 417 ~~~t~npA~~ 426 (427)
++++.|++|+
T Consensus 250 ~~~~~Na~rl 259 (264)
T 1xwy_A 250 ATTDANVKTL 259 (264)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999875
No 76
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=98.67 E-value=1.2e-06 Score=83.67 Aligned_cols=241 Identities=13% Similarity=-0.007 Sum_probs=122.7
Q ss_pred HHHHHHHcCCceEEecCc-CCCC-CcHHHHHHHHHHHhccccceeceeccc--cCCChhhHHHHHHHHH---HcCC----
Q 014320 129 SGQAAALAGGTTMHIDFV-IPIN-GSLTAGFEAYEKKAKNSCMDYGFHMAI--TKWDEVVSDEMEVMVK---EKGI---- 197 (427)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~---~~g~---- 197 (427)
...+.+.+.|||++++.. .... .......+..++.+...+...|++... +.+.....+++.++.. ..|+
T Consensus 79 ~el~~~~~aGv~tiV~~~g~~g~~r~~~~l~~la~~~gi~i~~~tG~y~~~~~P~~~~~~~~~L~~~~~~ei~~gi~~t~ 158 (365)
T 3rhg_A 79 FELNNFKELGGKTIVDATGSSSIGRDIRKLKQVAELTGINVVASSGLYIEKFEGKRLADDIDAMAKMIDDELNIGIDGTD 158 (365)
T ss_dssp HHHHHHHHTTEEEEEECCCSGGGTCCHHHHHHHHHHHCCEEECEECCCCHHHHGGGGGSCHHHHHHHHHHHHHTCSTTSS
T ss_pred HHHHHHHhcCCCeEEEcCCCCCCCCCHHHHHHHHHHHCCcEEEEeCccCCCCCchhhcCCHHHHHHHHHHHHHhccccCC
Confidence 445667889999999986 2211 233333333333332445555555111 1111002234433221 1232
Q ss_pred ---CeE-EEEEecCCCccCCHHHHHHHHHHHHHc-CCcEEEec-CChhhHHHHHHHHHHc-CCCCcccccccCCHHHHHH
Q 014320 198 ---NSF-KFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHA-ENGDAVFEGQKRMIEL-GITGPEGHALSRPPLLEGE 270 (427)
Q Consensus 198 ---~~i-k~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~-e~~~~~~~~~~~l~~~-G~~~~~~~~~~~p~~~e~~ 270 (427)
..| ++.+++. ......+.+++.++.|++. |+||.+|. .+.+...+.++.+.+. |..
T Consensus 159 vkag~IGEiGld~~-~t~~q~~~f~aq~~~A~~~~glPV~iH~~r~~~a~~e~l~iL~e~~~~~---------------- 221 (365)
T 3rhg_A 159 IRAGMIGEIGVSPF-FTDGEKNSLRAAALAQNNNPYASMNIHMPGWQRRGDEVLDILLTEMGCD---------------- 221 (365)
T ss_dssp CCCCEEEEEECCTT-CCHHHHHHHHHHHHHHTTCTTCEEEEECCTTSCCHHHHHHHHTTTTCCC----------------
T ss_pred ceeEEEEEEEcCCC-CCHHHHHHHHHHHHHHHHhcCCcEEEECCCCCcCHHHHHHHHHhccCCC----------------
Confidence 235 3444431 1111235678889999999 99999997 4322222222222222 211
Q ss_pred HHHHHHHHHHhcCCCEEEEcCC-CHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCc-cc
Q 014320 271 ATTRAIRLAEFVNTPLYVVHVM-SMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRAS-GH 348 (427)
Q Consensus 271 a~~~~~~~~~~~g~~~~i~H~~-~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~-~~ 348 (427)
..++.+.|+. +....+..+++.+.|..+..+..-.... +.. ... ..+. ..
T Consensus 222 ------------~~~vvi~H~~rs~~~~e~a~~~l~~G~~I~~~g~g~~~t-----f~~------~~~-----~~~d~~~ 273 (365)
T 3rhg_A 222 ------------PAKISLAHSDPSGKDIDYQCKMLDRGVWLEFDMIGLDIS-----FPK------EGA-----APSVMDT 273 (365)
T ss_dssp ------------GGGEEESCCGGGTTCHHHHHHHHHTTCEEEECCTTCCCB-----CSS------SCB-----CCCHHHH
T ss_pred ------------CCceEEecCCCCCCCHHHHHHHHhCCCEEEecCCCcccc-----ccc------ccc-----ccchHHH
Confidence 0136678997 3244677888888897665532200000 000 000 0111 12
Q ss_pred HHHHHHHHhcCC--ceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 349 NKALQAALATGI--LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 349 ~~~l~~~l~~G~--~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
.+.+.++++.|. .+.++||. |.....+..+ | .+....+..+. ..++..+++.+++.+++|.||+|+
T Consensus 274 a~~l~~li~~g~~drilleTD~-p~l~~~~~~G---------~-~~~~~l~~~~~-~~~~~~Gis~e~i~~~~~~Np~rl 341 (365)
T 3rhg_A 274 VEAVATLIERGYGNQIVLSHDV-FLKQMWAKNG---------G-NGWGFVPNVFL-SLLAQRGIDKTIIDKLCIDNPANL 341 (365)
T ss_dssp HHHHHHHHHTTCGGGEEECCCC-CSGGGSGGGT---------S-CTTTHHHHTHH-HHHHHTTCCHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHhCCCCcEEEeCCC-CCCCCCCcCC---------C-CCchhHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHH
Confidence 356888888885 58899995 5533222111 1 22222222222 233456899999999999999985
No 77
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=98.62 E-value=7.1e-07 Score=84.35 Aligned_cols=267 Identities=13% Similarity=0.059 Sum_probs=134.8
Q ss_pred cccccccccccCcCCC--------CCh-hhH---HHHHHHHHcCCceEEecCcCCCC-CcHHHHHHHHHHHhccccceec
Q 014320 106 GGIDPHTHLAMEFMGS--------ETI-DDF---FSGQAAALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAKNSCMDYG 172 (427)
Q Consensus 106 G~ID~H~H~~~~~~g~--------~~~-e~~---~~~~~~~l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 172 (427)
|++.+|=|+...+.+. ... +++ ......+.+.||+++++...... .+.....+..++.+...+...|
T Consensus 32 G~t~~HEHl~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~a~~aGv~tiV~~~~~~~~r~~~~l~~la~~~g~~i~~~tG 111 (339)
T 3gtx_A 32 GATLPHEHVIFGYPGYAGDVTLGPFDHAAALASCTETARALLARGIQTVVDATPNGCGRNPAFLREVSEATGLQILCATG 111 (339)
T ss_dssp CEEEEEEEEEECCTTGGGGTTTSCCCHHHHHHHHHHHHHHHHHTTEEEEEECCCTTTTCCHHHHHHHHHHHCCEEECEEC
T ss_pred CCeeeccCeeccCcccccCCCccccchHHHHHHHHHHHHHHHHhCCCeEEecCCCccCcCHHHHHHHHHHcCCcEEEEcC
Confidence 7888888875432111 011 222 23445678899999999763211 2333333333333334455555
Q ss_pred eeccc------cCCC---hhhHHHHHHHHHH---cC-------CCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEE
Q 014320 173 FHMAI------TKWD---EVVSDEMEVMVKE---KG-------INSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMV 233 (427)
Q Consensus 173 ~~~~~------~~~~---~~~~~~~~~l~~~---~g-------~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~ 233 (427)
++... ..+. ....+++.++... .| +..+++.++++.......+.+++.++.|++.|+||.+
T Consensus 112 ~hp~~~~~~~~~~~~~~~~~~~~~L~~~~~~e~~~gIg~tg~k~g~IEigld~~~~~~~q~~~f~aq~~lA~~~glPVii 191 (339)
T 3gtx_A 112 FYYEGGGATTYFKFRASLGDAESEIYEMMRTEVTEGIAGTGIRAGVIKLASSRDAITPYEQLFFRAAARVQRETGVPIIT 191 (339)
T ss_dssp CCCTTTSSCHHHHHHHHHSCHHHHHHHHHHHHHHTCSTTSSCCCSEEEEECCSSCCCHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred CCccCccCCcCCcccccccCCHHHHHHHHHHHHHhcccccCcccceEEEEcCCCCCCHHHHHHHHHHHHHHHHHCCeEEE
Confidence 55411 0100 1123445443321 12 2455888887632222345688889999999999999
Q ss_pred ecCC-hhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCC-CHHHHHHHHHHhhcCCCEE
Q 014320 234 HAEN-GDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM-SMDAMEEIAKARKAGQRVI 311 (427)
Q Consensus 234 H~e~-~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~-~~~~~~~i~~~~~~G~~v~ 311 (427)
|+.. .+.. +..+.+++.|.. ..++.+.|+. +.+ .+..+++.+.|..+.
T Consensus 192 H~~~gr~a~-~~~~iL~~~~~~----------------------------~~~~vi~H~~~~~~-~e~a~~~l~~G~~i~ 241 (339)
T 3gtx_A 192 HTQEGQQGP-QQAELLTSLGAD----------------------------PARIMIGHMDGNTD-PAYHRETLRHGVSIA 241 (339)
T ss_dssp ECSTTCCHH-HHHHHHHHTTCC----------------------------GGGEEECCGGGCCC-HHHHHHHHTTTCEEE
T ss_pred eCCCCcCHH-HHHHHHHHcCCC----------------------------cccEEEEccCCCCC-HHHHHHHHHcCcEEE
Confidence 9843 2221 122222222211 1235678996 333 577778878887665
Q ss_pred EecCccceeeCcccccCCCcccCceeEEcCCCCCc-ccHHHHHHHHhcCC--ceEEecCCCCCChh-hhhcCCCCCcc-C
Q 014320 312 GEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRAS-GHNKALQAALATGI--LQLVGTDHCAFNST-QKAFGIDDFRK-I 386 (427)
Q Consensus 312 ~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~-~~~~~l~~~l~~G~--~~~lgSD~~p~~~~-~~~~~~~~~~~-~ 386 (427)
.+..-. . .+ ...... ...+.+.++++.|. .+.++||. |+.+. .... .+... .
T Consensus 242 ~~g~~t-----~------------~~---~~~p~~~~~~~~l~~li~~~~~drilleTD~-p~~~~~~P~~--~p~~~~~ 298 (339)
T 3gtx_A 242 FDRIGL-----Q------------GM---VGTPTDAERLSVLTTLLGEGYADRLLLSHDS-IWHWLGRPPA--IPEAALP 298 (339)
T ss_dssp ECCTTC-----C------------SS---TTCCCHHHHHHHHHHHHHTTCGGGEEECCCC-EEEESSSCCC--CCGGGHH
T ss_pred EccCcc-----c------------cc---cCCCchHHHHHHHHHHHHhcCCCeEEEecCC-CccccCCccc--ccccccc
Confidence 422200 0 00 000011 23356788888776 58899995 54210 0000 00000 0
Q ss_pred CCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 387 PNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 387 ~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
..|..+.. .++..+...++..+++.+++.++++.||+|+
T Consensus 299 ~~g~n~p~-~l~~~~~~~~~~~Gis~e~i~~~~~~Np~rl 337 (339)
T 3gtx_A 299 AVKDWHPL-HISDDILPDLRRRGITEEQVGQMTVGNPARL 337 (339)
T ss_dssp HHHTCSTT-HHHHTHHHHHHHTTCCHHHHHHHHTHHHHHH
T ss_pred cCCCCCch-hHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 00111111 2222222344457899999999999999985
No 78
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=98.61 E-value=7.8e-07 Score=84.60 Aligned_cols=261 Identities=16% Similarity=0.124 Sum_probs=133.7
Q ss_pred cccccccccccCcC---------CCCChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHH----hccccceec
Q 014320 106 GGIDPHTHLAMEFM---------GSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKK----AKNSCMDYG 172 (427)
Q Consensus 106 G~ID~H~H~~~~~~---------g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 172 (427)
|++.+|=|+...+. ...+.+......+...+.|++|++|............+.+..+. +.+..+.-+
T Consensus 21 G~tl~HEHl~~~~~~~~~~~~~~~l~d~~~~~~el~~~~~~G~~tiVd~t~~~~GRd~~~l~~is~~t~~~Gv~Iv~~TG 100 (363)
T 3ovg_A 21 GITDCHDHFIKNGGPEVEEHIDFLMLNVDASIKEFKEFIDRGGSTIVTMDPPNVGRDVLKTLEIANAVKNLGGNVIMSTG 100 (363)
T ss_dssp CEEEEEECSCBCSSHHHHHCGGGCBCCHHHHHHHHHHHHHTTEEEEEECCCTTTTCCHHHHHHHHHHHGGGTCEEEEEEE
T ss_pred CCceeccceeccCChhhccCCcccccCHHHHHHHHHHHHHhCCCeEEEeCCCccCCCHHHHHHHHHhcccCCcEEEEeCC
Confidence 78888888755321 01123334444556678999999998644333222333333333 333333344
Q ss_pred eecccc-----CC----C-hhhHHHHHHHHHHcC-----------------CCeEEEEEecCCCccCCHHHHHHHHHHHH
Q 014320 173 FHMAIT-----KW----D-EVVSDEMEVMVKEKG-----------------INSFKFFMAYKGSFMINDELLIEGFKRCK 225 (427)
Q Consensus 173 ~~~~~~-----~~----~-~~~~~~~~~l~~~~g-----------------~~~ik~~~~~~~~~~~~~~~l~~~~~~a~ 225 (427)
++.... .+ + ++..+.+.+-+ ..| +..+|+.+++........+.+++.++.|+
T Consensus 101 ~y~~~~~~~~~~~~~~~~~e~l~~~~~~ei-~~Gi~~~~~~gp~~~~t~ikaG~ikig~s~~~~t~~Q~~~f~aq~~~A~ 179 (363)
T 3ovg_A 101 FHKAKFYDKYSSWLAVVPTEEIVKMCVAEI-EEGMDEYNYNGPVVKRSKAKAGIIKAGTGYGAIDRLELKALEVAARTSI 179 (363)
T ss_dssp CCCGGGSCTTTSHHHHSCHHHHHHHHHHHH-HTCCBTTTTSSSCCCBCSCCCCEEEEEEEETBEEHHHHHHHHHHHHHHH
T ss_pred CCcCcccccCcHhhhcCCHHHHHHHHHHHH-HhcccccccccccccCCCccCCEEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 432211 11 1 12222222222 233 23578877765333334567889999999
Q ss_pred HcCCcEEEecCC-hhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHh
Q 014320 226 SLGALAMVHAEN-GDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKAR 304 (427)
Q Consensus 226 ~~g~~v~~H~e~-~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~ 304 (427)
+.|+||.+|+.. .+.. +.++.+++.|.. ..++.++|+.....++..+++.
T Consensus 180 e~glPViiH~r~gr~a~-d~l~iL~e~g~~----------------------------~~~vvi~H~~~~~~~~~a~~~l 230 (363)
T 3ovg_A 180 LTGCPILVHTQLGTMAL-EVAKHLIGFGAN----------------------------PDKIQISHLNKNPDKYYYEKVI 230 (363)
T ss_dssp HHCCCEEEEEETTCSHH-HHHHHHHHHTCC----------------------------GGGEEEECGGGSCCHHHHHHHH
T ss_pred HhCCEEEEeCCCCCCHH-HHHHHHHhcCCC----------------------------CCcEEEEcCCCCCCHHHHHHHH
Confidence 999999999843 2222 222222222211 1246788987422234455555
Q ss_pred -hcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCC--ceEEecCCCCCChhhhhcCCC
Q 014320 305 -KAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGI--LQLVGTDHCAFNSTQKAFGID 381 (427)
Q Consensus 305 -~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~--~~~lgSD~~p~~~~~~~~~~~ 381 (427)
+.|..+..+..... .+ +| .....+.+.++++.|. .+.++||. |+.......
T Consensus 231 ~~~G~yI~f~g~~~~-----------------~~---~~--~~~ra~~l~~lv~~~p~drILleTDa-p~~~~l~~~--- 284 (363)
T 3ovg_A 231 KETGVTLCFDGPDRV-----------------KY---YP--DSLLAENIKYLVDKGLQKHITLSLDA-GRILYQRNY--- 284 (363)
T ss_dssp HHHCCEEEECCTTCT-----------------TT---CC--HHHHHHHHHHHHHTTCGGGEEECCCC-CSGGGSHHH---
T ss_pred HHCCcEEEECCeecc-----------------cc---CC--hhHHHHHHHHHHHhcCCCeEEEeCCC-CCCcCCCCC---
Confidence 67866554321100 00 01 0112356788888775 58999995 543211100
Q ss_pred CCccCCCCC--chhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 382 DFRKIPNGV--NGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 382 ~~~~~~~G~--~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
.. ..|. .+.. .++..+....+..+++.+++.++++.||+|+
T Consensus 285 --G~-~~g~~~n~p~-~l~~~~~~~a~~rGis~eei~~it~~Np~rl 327 (363)
T 3ovg_A 285 --GL-TKGKQTFGLA-YLFDRFLPLLKQVGVSKEAIFDILVNNPKRV 327 (363)
T ss_dssp --HH-HTTEECCCTH-HHHHTHHHHHHHHTCCHHHHHHHHTHHHHHH
T ss_pred --Cc-cCCCCCCCcc-HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 00 0000 0111 1222222334456799999999999999985
No 79
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=98.60 E-value=1.8e-06 Score=81.89 Aligned_cols=171 Identities=14% Similarity=0.100 Sum_probs=92.2
Q ss_pred eEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHH
Q 014320 199 SFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRL 278 (427)
Q Consensus 199 ~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~ 278 (427)
.||...+...........+++.++++++.|+||.+|........+.++.+.+.|..
T Consensus 177 ~I~~~~~~~~~t~~E~k~frA~a~aa~etG~Pv~iHt~~~~~~~e~l~iL~eeG~~------------------------ 232 (360)
T 3tn4_A 177 VIKLASSKGRITEYEKMFFRAAARAQKETGAVIITHTQEGTMGPEQAAYLLEHGAD------------------------ 232 (360)
T ss_dssp EEEEECBTTBCCHHHHHHHHHHHHHHHHHCCEEEEECSTTCCHHHHHHHHHHTTCC------------------------
T ss_pred EEEEEccCCCCCHHHHHHHHHHHHHHHHhCCcEEEEcCcccCCHHHHHHHHHcCCC------------------------
Confidence 46665444322222345689999999999999999985432222223334444431
Q ss_pred HHhcCCCEEEEcC-CCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHh
Q 014320 279 AEFVNTPLYVVHV-MSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALA 357 (427)
Q Consensus 279 ~~~~g~~~~i~H~-~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~ 357 (427)
.-++.+.|+ .+.+ .+..+++.+.|..+..+..- .. .+...|+ .....+.+.++++
T Consensus 233 ----~~~vvi~H~~~~~d-~~~~~~~l~~G~yl~fD~iG---------~~--------~~~~~p~--d~~r~~~l~~lv~ 288 (360)
T 3tn4_A 233 ----PKKIVIGHMCDNTD-PDYHRKTLAYGVYIAFDRFG---------IQ--------GMVGAPT--DEERVRTLLALLR 288 (360)
T ss_dssp ----GGGEEECCGGGCCC-HHHHHHHHTTTCEEEECCTT---------CC--------CSTTCCC--HHHHHHHHHHHHH
T ss_pred ----CCceEEEcCCCCCC-HHHHHHHHHcCCEEEEcccc---------cc--------cccCCCC--hHHHHHHHHHHHH
Confidence 125678895 3433 46677888888766543221 00 0000111 1122356778888
Q ss_pred cCC--ceEEecCCC------CCChhhhhcCCCCCccCCCCCchh-hHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 358 TGI--LQLVGTDHC------AFNSTQKAFGIDDFRKIPNGVNGI-EERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 358 ~G~--~~~lgSD~~------p~~~~~~~~~~~~~~~~~~G~~~~-e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
.|- .+.|++|-. |+.......+. ...+|..-+ ...+|.+ ++.++|.+++-++++.||+|+
T Consensus 289 ~g~~drILLstDa~~~~~~~py~~p~p~r~~----~~~~~y~~i~~~~ip~L-----~~~Gvs~e~I~~i~~~NP~rl 357 (360)
T 3tn4_A 289 DGYEKQIMLSHDTVNVWLGRPFTLPEPFAEM----MKNWHVEHLFVNIIPAL-----KNEGIRDEVLEQMFIGNPAAL 357 (360)
T ss_dssp TTCGGGEEECCCCEEEESSSCCCCCHHHHHH----TTTCSTTHHHHTHHHHH-----HHTTCCHHHHHHHHTHHHHHH
T ss_pred hcCcceEEEecCCCcccccCCCCCccccccc----CCCCCchhHHHHHHHHH-----HHcCCCHHHHHHHHHHhHHHH
Confidence 875 589999941 33211110000 001122111 1122322 235799999999999999985
No 80
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=98.51 E-value=1.1e-06 Score=79.43 Aligned_cols=230 Identities=16% Similarity=0.123 Sum_probs=124.2
Q ss_pred ccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccccCCChhhHH
Q 014320 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSD 186 (427)
Q Consensus 107 ~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (427)
+||+|+|+... . +.......+...||..+.- + .........+ .+.+..+..+..+|+|........+.++
T Consensus 3 liDtH~HL~~~----~---d~~~vl~~a~~~gV~~i~v-~-~~~~~~~~~~-~la~~~~~v~~~~GiHP~~~~~~~~~l~ 72 (254)
T 3gg7_A 3 LIDFHVHLDLY----P---DPVAVARACEERQLTVLSV-T-TTPAAWRGTL-ALAAGRPHVWTALGFHPEVVSERAADLP 72 (254)
T ss_dssp CEEEEECGGGS----S---SHHHHHHHHHHTTCEEEEC-C-SSGGGHHHHH-GGGTTCTTEEECBCCCGGGTTTTGGGTH
T ss_pred eEEEeeCCCCC----C---CHHHHHHHHHHCCCcEEEe-c-CCHHHHHHHH-HHHHhCCCeEEEEeeCcccccccHHHHH
Confidence 89999999753 1 3333356677889987662 2 1111222222 1111112334445555433222234456
Q ss_pred HHHHHHHHcCCCeEE-EEEecCCCc----cCCHHHHHHHHHHHHHcCCcEE-EecCChhhHHHHHHHHHHcCCCCccccc
Q 014320 187 EMEVMVKEKGINSFK-FFMAYKGSF----MINDELLIEGFKRCKSLGALAM-VHAENGDAVFEGQKRMIELGITGPEGHA 260 (427)
Q Consensus 187 ~~~~l~~~~g~~~ik-~~~~~~~~~----~~~~~~l~~~~~~a~~~g~~v~-~H~e~~~~~~~~~~~l~~~G~~~~~~~~ 260 (427)
.+.+++ . .+..|. +.+++.... ....+.+++.++.|+++++||. +|+.+.. ...
T Consensus 73 ~l~~~~-~-~~vaIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~lPviSiH~r~a~--~~~---------------- 132 (254)
T 3gg7_A 73 WFDRYL-P-ETRFVGEVGLDGSPSLRGTWTQQFAVFQHILRRCEDHGGRILSIHSRRAE--SEV---------------- 132 (254)
T ss_dssp HHHHHG-G-GCSEEEEEECCCCGGGGGGHHHHHHHHHHHHHHHHHTTCEEEEEECTTCH--HHH----------------
T ss_pred HHHHHh-h-hccEEEEEecCCCcccCCCHHHHHHHHHHHHHHHHHcCCCEEEEEcCCcH--HHH----------------
Confidence 666665 2 344553 444543211 1234568899999999999998 9985421 111
Q ss_pred ccCCHHHHHHHHHHHHHHHHhcCCC-EEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEE
Q 014320 261 LSRPPLLEGEATTRAIRLAEFVNTP-LYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVM 339 (427)
Q Consensus 261 ~~~p~~~e~~a~~~~~~~~~~~g~~-~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~ 339 (427)
+++.++.+.+ ..+.|+.+.. .+.++++.+.|..+.. .+. +
T Consensus 133 ---------------~~il~~~~~~~~~v~H~fsG~-~e~a~~~l~~G~yis~--~g~-~-------------------- 173 (254)
T 3gg7_A 133 ---------------LNCLEANPRSGTPILHWYSGS-VTELRRAISLGCWFSV--GPT-M-------------------- 173 (254)
T ss_dssp ---------------HHHHHHCGGGEEEEEETCCSC-HHHHHHHHHTTCEEEE--CHH-H--------------------
T ss_pred ---------------HHHHHHcCCCCcEEEEeCCCC-HHHHHHHHcCCcEEEE--Ccc-c--------------------
Confidence 1222222111 2266886654 4667777777865543 210 0
Q ss_pred cCCCCCcccHHHHHHHHhcC--CceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHH
Q 014320 340 SPPIRASGHNKALQAALATG--ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVR 417 (427)
Q Consensus 340 ~pplr~~~~~~~l~~~l~~G--~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~ 417 (427)
.+. +.+++.++.- ..+.+.||. |+.+.. |-.+....++..+..+.+-.+++.+++.+
T Consensus 174 ---~~~----~~~~~~v~~ip~drlLlETD~-P~~~~r-------------g~~n~P~~v~~v~~~iA~~~g~~~ee~~~ 232 (254)
T 3gg7_A 174 ---VRT----QKGAALIRSMPRDRVLTETDG-PFLELD-------------GQAALPWDVKSVVEGLSKIWQIPASEVER 232 (254)
T ss_dssp ---HTS----HHHHHHHHHSCGGGEEECCCT-TTSEET-------------TEECCGGGHHHHHHHHHHHHTSCHHHHHH
T ss_pred ---Cch----HHHHHHHHHcCCCeEEEeCCC-CccccC-------------CCCCCHHHHHHHHHHHHHHhCcCHHHHHH
Confidence 011 1234444432 358999995 765321 22222334555554444556799999999
Q ss_pred HHchhhhcC
Q 014320 418 LTSTEWGRL 426 (427)
Q Consensus 418 ~~t~npA~~ 426 (427)
.++.|+.++
T Consensus 233 ~~~~N~~~l 241 (254)
T 3gg7_A 233 IVKENVSRL 241 (254)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999764
No 81
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=98.51 E-value=5.2e-06 Score=75.70 Aligned_cols=123 Identities=16% Similarity=0.155 Sum_probs=62.6
Q ss_pred ccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccc---cceeceeccccCCChh
Q 014320 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNS---CMDYGFHMAITKWDEV 183 (427)
Q Consensus 107 ~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 183 (427)
+||+|+|+....... ...+.....+.+...||+.++..... ....+...+...+. ...++++..... ...
T Consensus 3 ~iD~H~Hl~~~~~~~-~~~~~~~~l~~~~~~Gv~~~v~~~~~-----~~~~~~~~~~~~~~p~~~~~~g~hP~~~~-~~~ 75 (265)
T 1yix_A 3 LVDSHCHLDGLDYES-LHKDVDDVLAKAAARDVKFCLAVATT-----LPSYLHMRDLVGERDNVVFSCGVHPLNQN-DPY 75 (265)
T ss_dssp EEEEEECGGGSCTTT-TCSSHHHHHHHHHHTTEEEEEECCSS-----HHHHHHHHHHHCSCTTEEEEECCCTTCCS-SCC
T ss_pred EEEEeeCCCchhhcc-cccCHHHHHHHHHHCCCCEEEEeCCC-----HHHHHHHHHHHHHCCCeEEEEEeCCCccc-ccc
Confidence 799999997652110 01223333566778999998865321 12222222332221 111222211111 001
Q ss_pred hHHHHHHHHHHcCCCeEEE-EEecCC---CccCCHHHHHHHHHHHHHcCCcEEEecC
Q 014320 184 VSDEMEVMVKEKGINSFKF-FMAYKG---SFMINDELLIEGFKRCKSLGALAMVHAE 236 (427)
Q Consensus 184 ~~~~~~~l~~~~g~~~ik~-~~~~~~---~~~~~~~~l~~~~~~a~~~g~~v~~H~e 236 (427)
..++++++++...+..++. .+++.. ......+.++..++.|+++|++|.+|+.
T Consensus 76 ~~~~l~~~~~~~~~~~iGe~Gl~~~~~~~~~~~q~~~~~~~~~~a~~~~~pv~iH~~ 132 (265)
T 1yix_A 76 DVEDLRRLAAEEGVVALGETGLDYYYTPETKVRQQESFIHHIQIGRELNKPVIVHTR 132 (265)
T ss_dssp CHHHHHHHHTSTTEEEEEEEEEECTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred hHHHHHHHhccCCeEEEEccccCCCcCCCChHHHHHHHHHHHHHHHHhCCCEEEEec
Confidence 2566777663222223322 233321 1122356788999999999999999974
No 82
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=98.45 E-value=4.5e-06 Score=77.53 Aligned_cols=247 Identities=10% Similarity=-0.037 Sum_probs=125.0
Q ss_pred EeccccccccccccCcCC------CCC--hhhHHHHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhccccceece
Q 014320 103 VMPGGIDPHTHLAMEFMG------SET--IDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGF 173 (427)
Q Consensus 103 v~PG~ID~H~H~~~~~~g------~~~--~e~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 173 (427)
+=|++||+|+|+...... ... ..+...-...+-..||..++-....... .....++..++ .+.....+.
T Consensus 23 ~p~~~iDtH~Hl~~~~~p~~~~~~~~p~~~~~~e~~l~~~~~~GV~~~V~v~~~~~~~~n~~~~~~~~~-~p~r~~g~~- 100 (294)
T 4i6k_A 23 MKMNCIDTHAHVFSTQDHSIETARYAPDYEATVQSFISHLDEHNFTHGVLVQPSFLGTNNQAMLNAIQQ-YPDRLKGIA- 100 (294)
T ss_dssp --CCSEEEEECCBCTTSCCCTTCSCCCCSCBCHHHHHHHHHHTTCCEEEEECCGGGTTCCHHHHHHHHH-STTTEEEEE-
T ss_pred CCCCceEeeeEeecCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCeEEEecCcccccchHHHHHHHHH-CCCeEEEEE-
Confidence 445789999999864211 000 1233333556677899887754221111 11112222222 121111111
Q ss_pred eccccCCChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCC
Q 014320 174 HMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGI 253 (427)
Q Consensus 174 ~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~ 253 (427)
++.. +...++++++. +.|+.++++.....+.....++.++..++.++++|+++.+|+....
T Consensus 101 --~v~P--~~~~~eL~~l~-~~gv~Gi~l~~~~~~~~~~~~~~~~~~~~~a~~~glpv~iH~~~~~-------------- 161 (294)
T 4i6k_A 101 --VVQH--TTTFNELVNLK-AQGIVGVRLNLFGLNLPALNTPDWQKFLRNVESLNWQVELHAPPKY-------------- 161 (294)
T ss_dssp --CCCT--TCCHHHHHHHH-TTTEEEEEEECTTSCCCCSSSHHHHHHHHHHHHTTCEEEEECCHHH--------------
T ss_pred --EeCC--cccHHHHHHHH-HCCCcEEEeccCCCCCCCcccHHHHHHHHHHHHcCCEEEEeeCcch--------------
Confidence 1111 11235566665 5688888865432222234668999999999999999999985421
Q ss_pred CCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCH--------HHHHHHHHHhhcCCCEEEecCccceeeCccc
Q 014320 254 TGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM--------DAMEEIAKARKAGQRVIGEPVVSGLVLDDSW 325 (427)
Q Consensus 254 ~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~--------~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~ 325 (427)
+....+++++..+++.+.|+... ...+.+..+.+. -++++.++-.+.+.. .
T Consensus 162 ------------------l~~~~~~l~~~p~~~Vi~H~g~p~~~~g~~~~~~~~~~~l~~~-~nv~~k~Sg~~~~~~-~- 220 (294)
T 4i6k_A 162 ------------------LVQLLPQLNEYSFDVVIDHFGRVDPVKGIEDPDYQKFLSLLNV-KQHWIKVSGFYRLGA-T- 220 (294)
T ss_dssp ------------------HHHHHHHHTTSSSCEEESGGGCCCTTTCTTCHHHHHHHHHCCT-TTEEEECCCGGGSSS-T-
T ss_pred ------------------HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhC-CCEEEEecccccccc-c-
Confidence 11223444455577888898652 123333333322 246665542111000 0
Q ss_pred ccCCCcccCceeEEcCCCCCcccHHHHHHHHhc-C-CceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHH
Q 014320 326 LWHSDFVTAAKYVMSPPIRASGHNKALQAALAT-G-ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDT 403 (427)
Q Consensus 326 ~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~-G-~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~ 403 (427)
..|. ..+...+.+.++. | ..+.+|||+ |+.... +.+... ..+ .
T Consensus 221 --------------~~~~--~~~~~~l~~~~~~~g~dRll~gSD~-P~~~~~-------------~~~~y~----~~~-~ 265 (294)
T 4i6k_A 221 --------------PSNI--NIAQQAYNIFKEKGFLHKLIWGSDW-PHTQHE-------------SLITYE----DAI-K 265 (294)
T ss_dssp --------------THHH--HHHHHHHHHHHHHTCGGGEECCCCB-TCTTCT-------------TTCCHH----HHH-H
T ss_pred --------------CCCc--hhhHHHHHHHHHHhCcccEEEeCCC-CCCCCc-------------CCCCHH----HHH-H
Confidence 0000 1123445555542 2 368999996 775421 111111 112 1
Q ss_pred HHhcCCCCHHHHHHHHchhhhcC
Q 014320 404 MVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 404 ~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
.+.+-.++.++.-++...|++|+
T Consensus 266 ~l~~~~~~~~~~~~i~~~NA~rl 288 (294)
T 4i6k_A 266 AFKQIVFDKHEQCLILNQNPTEL 288 (294)
T ss_dssp HHHHHCCCHHHHHHHHTHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHCHHHH
Confidence 12222489999999999999875
No 83
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=98.39 E-value=9.9e-06 Score=73.79 Aligned_cols=125 Identities=16% Similarity=0.092 Sum_probs=63.6
Q ss_pred ccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccc-cCCChhhH
Q 014320 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAI-TKWDEVVS 185 (427)
Q Consensus 107 ~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 185 (427)
+||+|+|+..... ..+.......+...||+.++...... ...+.+....+..+.....++++... ....++..
T Consensus 2 ~iD~H~Hl~~~~~----~~~~~~~l~~~~~~Gv~~~v~~~~~~--~~~~~~~~~~~~~p~~~~~~g~~P~~~~~~~~~~~ 75 (265)
T 2gzx_A 2 LIDTHVHLNDEQY----DDDLSEVITRAREAGVDRMFVVGFNK--STIERAMKLIDEYDFLYGIIGWHPVDAIDFTEEHL 75 (265)
T ss_dssp CEEEEECTTSGGG----TTTHHHHHHHHHHTTCCEEEEEECSH--HHHHHHHHHHHHCTTEEEEECCCGGGGGGCCHHHH
T ss_pred eEEEeeCCCCccc----ccCHHHHHHHHHHcCCCEEEEeCCCH--HHHHHHHHHHHhCCCEEEEEEeccCccccCCHHHH
Confidence 7999999876511 11233335567778999887654221 11111222222222211112222111 11122345
Q ss_pred HHHHHHHHHcCCCeEEEE-EecCC---CccCCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 186 DEMEVMVKEKGINSFKFF-MAYKG---SFMINDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 186 ~~~~~l~~~~g~~~ik~~-~~~~~---~~~~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
++++++++..++.+++.. +++.. ......+.++..++.|.++|+++.+|+..
T Consensus 76 ~~l~~~~~~~~~~~iGe~Gl~~~~~~~~~~~~~~~~~~~~~~a~~~~~pv~iH~~~ 131 (265)
T 2gzx_A 76 EWIESLAQHPKVIGIGEMGLDYHWDKSPADVQKEVFRKQIALAKRLKLPIIIHNRE 131 (265)
T ss_dssp HHHHHHTTSTTEEEEEEEEEECSCCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEES
T ss_pred HHHHHHhcCCCEEEEEeccCCCCCCCCCHHHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 666666532233344322 22221 11234567899999999999999999743
No 84
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=98.38 E-value=1.1e-05 Score=75.35 Aligned_cols=256 Identities=13% Similarity=0.012 Sum_probs=135.6
Q ss_pred cccccccccccCcC-CC-----CChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhc-----cccceecee
Q 014320 106 GGIDPHTHLAMEFM-GS-----ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAK-----NSCMDYGFH 174 (427)
Q Consensus 106 G~ID~H~H~~~~~~-g~-----~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 174 (427)
-|||+|+|+..+.+ |. ...++.......+...||..++..+... ......++..+ .-+ +.+..+|+|
T Consensus 27 ~~iDtH~HL~~~~f~g~y~gk~~h~~d~~~vl~rA~~aGV~~ii~~g~~~-~~~~~~~~La~-~~~~~~~~~v~~~~GiH 104 (325)
T 3ipw_A 27 QFIDIGANLTDDNYFGNYHGKHYHEEDIDVVLQRAERNGLSHIIITSGCL-NDFKKAIEIIN-KYQNLTNIKLVTTIGVH 104 (325)
T ss_dssp CEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECCCSH-HHHHHHHHHHH-HHGGGCSSEEEEEECCC
T ss_pred CeEEEEECCCchHhccccccccccccCHHHHHHHHHHcCCcEEEEccCCH-HHHHHHHHHHH-HCCCcccceEEEEEEEC
Confidence 59999999987632 00 0123444456778889999998754321 12222222222 223 344455665
Q ss_pred ccccC-CChh-hHHHHHHHHHHc--CCCeEE-EEEecCCCccC----CHHHHHHHHHHHHH-cCCcEEEecCChhhHHHH
Q 014320 175 MAITK-WDEV-VSDEMEVMVKEK--GINSFK-FFMAYKGSFMI----NDELLIEGFKRCKS-LGALAMVHAENGDAVFEG 244 (427)
Q Consensus 175 ~~~~~-~~~~-~~~~~~~l~~~~--g~~~ik-~~~~~~~~~~~----~~~~l~~~~~~a~~-~g~~v~~H~e~~~~~~~~ 244 (427)
..... ..++ .++++++++... .+..|. +.+++...... ..+.+++.++.|++ +++||.+|+.+. ....
T Consensus 105 P~~~~~~~~~~~l~~L~~l~~~~~~~vvAIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~~lPviiH~r~A--~~d~ 182 (325)
T 3ipw_A 105 PTRTNELKQEGYLDELLLLCEKNIDKVVAIGEIGLDYERLQFSDKETQLSGYRTLSILHQKYPYLPFFFHCRKS--WSDL 182 (325)
T ss_dssp GGGGGGGGSTTHHHHHHHHHHHTGGGEEEEEEEEEETTCCSSSCHHHHHHHHHHTHHHHHHCTTCCEEEEEESC--HHHH
T ss_pred cchhhcCCchHHHHHHHHHHhcCCCCEEEEEeeecCCCcCCCCCHHHHHHHHHHHHHHHHHhhCCeEEEEeCch--HHHH
Confidence 43222 2222 567788877432 445553 44565321111 24578889999999 999999998432 1112
Q ss_pred HHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcc
Q 014320 245 QKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDS 324 (427)
Q Consensus 245 ~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~ 324 (427)
.+.+.+.+. ...+. +.|+.+.. .+.++++.+.|..+....+ .
T Consensus 183 l~iL~~~~~----------------------------~~~~g-ViH~FsGs-~e~a~~~l~lG~yis~~G~---~----- 224 (325)
T 3ipw_A 183 CQLNKELGY----------------------------NGCKG-VVHCFDGT-EEEMNQILNEGWDIGVTGN---S----- 224 (325)
T ss_dssp HHHHHHTTC----------------------------TTSCE-EECSCCCC-HHHHHHHHHTTCEEEECSG---G-----
T ss_pred HHHHHhcCC----------------------------CCCcE-EEEECCCC-HHHHHHHHhcCcEEeeCcc---c-----
Confidence 222222111 01223 66987655 4777888888865554221 0
Q ss_pred cccCCCcccCceeEEcCCCCCcccHHHHHHHHhc--CCceEEecCCCCCChhhhh-----cCCCCCcc---------CCC
Q 014320 325 WLWHSDFVTAAKYVMSPPIRASGHNKALQAALAT--GILQLVGTDHCAFNSTQKA-----FGIDDFRK---------IPN 388 (427)
Q Consensus 325 ~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~--G~~~~lgSD~~p~~~~~~~-----~~~~~~~~---------~~~ 388 (427)
++.. +.+ +.++. -..+.+-||. |+...... .-..++.. ...
T Consensus 225 ------------------~k~~---~~~-~~v~~iPldrlLlETDa-P~l~~~~~~~~~~~~~~p~p~r~~~k~~~~~~~ 281 (325)
T 3ipw_A 225 ------------------LQSI---ELL-NVMKQIPIERLHIETDC-PYCGIKKTSAGFKYLKEKDFGVKVEKYQRNKYV 281 (325)
T ss_dssp ------------------GSSH---HHH-HHHTTSCGGGEEECCCT-TSCCCCTTSGGGGGCSSCCCCBCGGGCCTTSCB
T ss_pred ------------------cCcH---HHH-HHHHhCCcccEEEeCCC-ccccccccccchhcccccCcccccccccccccc
Confidence 1111 112 33332 2357899994 66421000 00001100 001
Q ss_pred CCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 389 GVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 389 G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
|-.+-...++..+..+.+-.+++++++.+.++.|.-++
T Consensus 282 g~rNeP~~v~~v~~~iA~l~g~~~eeva~~t~~Na~~l 319 (325)
T 3ipw_A 282 QRRNEPSNIIDIAIIMSSIKHISLFEFVNKVYSNSMNM 319 (325)
T ss_dssp TTCCCGGGHHHHHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred CCcCcHHHHHHHHHHHHHhhCcCHHHHHHHHHHHHHHH
Confidence 33444556666665555656799999999999998663
No 85
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=98.28 E-value=2.6e-05 Score=71.32 Aligned_cols=159 Identities=14% Similarity=0.063 Sum_probs=90.3
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc-CCcEEEecCChhhHHHHHHHHHHcCCCCccccc
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHAENGDAVFEGQKRMIELGITGPEGHA 260 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~ 260 (427)
++..++++++++..|+.+++.+.-.. . ..+.+..+++.|.++ |++|.+|+......
T Consensus 101 ~~~~~el~~~~~~~g~~gi~~~g~~~---~-~~~~~~~~~~~a~~~~~lpv~iH~~~~~~~------------------- 157 (272)
T 3cjp_A 101 NDTNSYIEENIVNNKLVGIGELTPAS---G-QIKSLKPIFKYSMDSGSLPIWIHAFNPLVL------------------- 157 (272)
T ss_dssp HHHHHHHHHHTTTTTCSEEEEECCCT---T-CGGGGHHHHHHHHHTTCCCEEECCSTTCCH-------------------
T ss_pred HHHHHHHHHHHHhcCceEEEecCCCC---C-ccHHHHHHHHHHHhccCCcEEEeCCCCCcc-------------------
Confidence 34566677765456888988653221 2 567899999999999 99999998642110
Q ss_pred ccCCHHHHHHHHHHHHHHHHhc-CCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEE
Q 014320 261 LSRPPLLEGEATTRAIRLAEFV-NTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVM 339 (427)
Q Consensus 261 ~~~p~~~e~~a~~~~~~~~~~~-g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~ 339 (427)
.+.....++.++. +.++.++|.......+.++.+++. -+++.+++...
T Consensus 158 ---------~~~~~~~~~l~~~p~l~iv~~H~G~~~~~~~~~~~~~~-~~~y~~~s~~~--------------------- 206 (272)
T 3cjp_A 158 ---------QDIKEIAELCKAFPKVPVILGHMGGSNWMTAVELAKEI-QNLYLDTSAYF--------------------- 206 (272)
T ss_dssp ---------HHHHHHHHHHHHSTTSCEEEGGGGGGGHHHHHHHHHHC-TTEEEECTTCS---------------------
T ss_pred ---------ccHHHHHHHHHHCCCceEEEECCCCccHHHHHHHHHhC-CCEEEEecccc---------------------
Confidence 1112222333333 356778887654322344444432 23554443210
Q ss_pred cCCCCCcccHHHHHHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHH
Q 014320 340 SPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLT 419 (427)
Q Consensus 340 ~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~ 419 (427)
. ....+.+.+.+ +..+.+|||+ |+..... .. ..+...+++.++.-+++
T Consensus 207 ----~-~~~~~~~~~~~--~dril~gSD~-P~~~~~~-------------------~~-----~~~~~~~l~~~~~~~i~ 254 (272)
T 3cjp_A 207 ----S-TFVLKIVINEL--PLKCIFGTDM-PFGDLQL-------------------SI-----EAIKKMSNDSYVANAVL 254 (272)
T ss_dssp ----C-HHHHHHHHHHS--TTTEECCCCT-TSSCHHH-------------------HH-----HHHHHHCSSHHHHHHHH
T ss_pred ----c-HHHHHHHHHhC--CCeEEEeCCC-CCCChHH-------------------HH-----HHHHhcCCCHHHHHHHH
Confidence 0 01112233333 4789999996 7642111 01 11122469999999999
Q ss_pred chhhhcC
Q 014320 420 STEWGRL 426 (427)
Q Consensus 420 t~npA~~ 426 (427)
..|++|+
T Consensus 255 ~~Na~rl 261 (272)
T 3cjp_A 255 GDNISRL 261 (272)
T ss_dssp THHHHHH
T ss_pred HHHHHHH
Confidence 9999874
No 86
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=98.26 E-value=5.3e-06 Score=75.93 Aligned_cols=238 Identities=15% Similarity=0.116 Sum_probs=119.5
Q ss_pred cccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhcc---ccceeceeccc-cCCC
Q 014320 106 GGIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKN---SCMDYGFHMAI-TKWD 181 (427)
Q Consensus 106 G~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~ 181 (427)
-++|.|+|+....+ ..+.......+-+.||+.++..... ....+...+...+ ....++++... ....
T Consensus 12 ~~~~~~~hl~~~~~----~~~~~~~l~~~~~~GV~~~v~~~~~-----~~~~~~~~~l~~~~p~i~~~~G~hP~~~~~~~ 82 (268)
T 1j6o_A 12 HMVDTHAHLHFHQF----DDDRNAVISSFEENNIEFVVNVGVN-----LEDSKKSLDLSKTSDRIFCSVGVHPHDAKEVP 82 (268)
T ss_dssp CEEEEEECTTSGGG----TTTHHHHHHTTTTTTEEEEEEECSS-----HHHHHHHHHHHTTCTTEEEEECCCGGGGGGCC
T ss_pred cccccccCCCChhh----ccCHHHHHHHHHHcCCCEEEEeCCC-----HHHHHHHHHHHHHCCCEEEEEeeccccccccC
Confidence 36899999976521 1233333556778999988875421 1122222222222 12222333211 1112
Q ss_pred hhhHHHHHHHHHHcCCCeEEE-EEecCC---CccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcc
Q 014320 182 EVVSDEMEVMVKEKGINSFKF-FMAYKG---SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPE 257 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~-~~~~~~---~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~ 257 (427)
++.+++++++++...+..++. .+++.. ......+.++..++.|.++|++|.+|+.+. ....
T Consensus 83 ~~~~~~l~~~~~~~~~~~iGe~Gld~~~~~~~~~~q~~~f~~~~~~a~~~~lPv~iH~~~~--~~~~------------- 147 (268)
T 1j6o_A 83 EDFIEHLEKFAKDEKVVAIGETGLDFFRNISPAEVQKRVFVEQIELAGKLNLPLVVHIRDA--YSEA------------- 147 (268)
T ss_dssp TTHHHHHHHHTTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESC--HHHH-------------
T ss_pred HHHHHHHHHHhccCCEEEEEccccCCcccCCChHHHHHHHHHHHHHHHHhCCCEEEEeCch--HHHH-------------
Confidence 344666666653222333332 234321 112345678999999999999999997432 1111
Q ss_pred cccccCCHHHHHHHHHHHHHHHHhc---CCCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccC
Q 014320 258 GHALSRPPLLEGEATTRAIRLAEFV---NTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTA 334 (427)
Q Consensus 258 ~~~~~~p~~~e~~a~~~~~~~~~~~---g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~ 334 (427)
+++.++. ..++.+ |+.... .+.++.+.+.| ++.+++....
T Consensus 148 ------------------~~il~~~p~~~~~~I~-H~~~g~-~~~~~~~~~~g--~y~~~sg~~~--------------- 190 (268)
T 1j6o_A 148 ------------------YEILRTESLPEKRGVI-HAFSSD-YEWAKKFIDLG--FLLGIGGPVT--------------- 190 (268)
T ss_dssp ------------------HHHHHHSCCCSSCEEE-TTCCSC-HHHHHHHHHHT--EEEEECGGGG---------------
T ss_pred ------------------HHHHHhcCCCCCCEEE-EcCCCC-HHHHHHHHHCC--CeEEeccccc---------------
Confidence 1222222 245655 975533 34555555555 4443332100
Q ss_pred ceeEEcCCCCCcccHHHHHHHHhc-C-CceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCH
Q 014320 335 AKYVMSPPIRASGHNKALQAALAT-G-ILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISV 412 (427)
Q Consensus 335 ~~~~~~pplr~~~~~~~l~~~l~~-G-~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l 412 (427)
.+. .+.+.++++. + ..+.++||. |+...... .|-.+....++.....+.+..+++.
T Consensus 191 --------~~~---~~~l~~~i~~~~~driL~eTD~-P~~~~~~~----------~g~~n~p~~~~~~~~~la~~~~~~~ 248 (268)
T 1j6o_A 191 --------YPK---NEALREVVKRVGLEYIVLETDC-PFLPPQPF----------RGKRNEPKYLKYVVETISQVLGVPE 248 (268)
T ss_dssp --------CTT---CHHHHHHHHHHCGGGEEECCCB-TSCCCGGG----------TTSCCCGGGHHHHHHHHHHHHTSCH
T ss_pred --------ccc---hHHHHHHHHhCChhhEEEecCC-CCCCCccc----------CCCCCchHHHHHHHHHHHHHhCcCH
Confidence 000 0223444433 2 478999996 66432211 1111111233333323323247999
Q ss_pred HHHHHHHchhhhcC
Q 014320 413 TDYVRLTSTEWGRL 426 (427)
Q Consensus 413 ~~~v~~~t~npA~~ 426 (427)
+++.+.++.|++|+
T Consensus 249 e~~~~i~~~Na~rl 262 (268)
T 1j6o_A 249 AKVDEATTENARRI 262 (268)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999874
No 87
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=98.26 E-value=8.9e-06 Score=75.15 Aligned_cols=125 Identities=10% Similarity=0.038 Sum_probs=68.7
Q ss_pred cccccccccccCcC----C--C--CChhhHHHHHHHHHcCCceEEecCcCC-CCCcHHHHHHHHHHHhccccceeceecc
Q 014320 106 GGIDPHTHLAMEFM----G--S--ETIDDFFSGQAAALAGGTTMHIDFVIP-INGSLTAGFEAYEKKAKNSCMDYGFHMA 176 (427)
Q Consensus 106 G~ID~H~H~~~~~~----g--~--~~~e~~~~~~~~~l~~GvTtv~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (427)
++||+|+|+..+.. + . ....+...-.+.+-..||+..+-.... ........++..++ .+.....+ .+
T Consensus 13 ~iID~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~~~~~~~~~~n~~~~~~~~~-~p~r~~~~---~~ 88 (288)
T 2ffi_A 13 TAIDSHAHVFSRGLNLASQRRYAPNYDAPLGDYLGQLRAHGFSHGVLVQPSFLGTDNRYLLSALQT-VPGQLRGV---VM 88 (288)
T ss_dssp CCEEBCCCCBCHHHHHHTTCCSSCCSCBCHHHHHHHHHHTSCCEECCBCCGGGTTCCHHHHHHHHH-STTTBCCB---BC
T ss_pred CceeecccccCCCCCCCCcccCCCCCCCCHHHHHHHHHHhCCCeEEEECCccccccHHHHHHHHHH-CCCCEEEE---EE
Confidence 79999999875410 0 0 001122222455667899977644311 01111222222222 22111111 11
Q ss_pred ccCCChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 177 ITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 177 ~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
+.. ....++++++. ..|+.++++...+.+....+++.+..+++.|.++|++|.+|+..
T Consensus 89 v~p--~~~~~el~~~~-~~g~~Gi~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~~ 146 (288)
T 2ffi_A 89 LER--DVEQATLAEMA-RLGVRGVRLNLMGQDMPDLTGAQWRPLLERIGEQGWHVELHRQV 146 (288)
T ss_dssp CCS--SCCHHHHHHHH-TTTCCEEECCCSSSCCCCTTSTTTHHHHHHHHHHTCEEEECSCT
T ss_pred eCC--CCCHHHHHHHH-HCCCeEEEEecccCCCCCcccHHHHHHHHHHHHCCCeEEEeech
Confidence 111 11135677776 57899998776554323456678999999999999999999854
No 88
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=98.26 E-value=3.5e-05 Score=72.73 Aligned_cols=152 Identities=16% Similarity=0.069 Sum_probs=88.5
Q ss_pred cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHH
Q 014320 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATT 273 (427)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~ 273 (427)
.++.++.+.-+. ...+.+.+.++++.|++.|+++++|+ |... .. .+.
T Consensus 163 ~~vvG~dL~g~E---~~~~~~~~~~~~~~A~~~gl~~~~HagE~~~-~~----------------------------~i~ 210 (343)
T 3rys_A 163 APIAGIGLDSAE---VGNPPSKFERLYQRAAEAGLRRIAHAGEEGP-AS----------------------------YIT 210 (343)
T ss_dssp CCCCEEEEESCC---TTCCGGGGHHHHHHHHHTTCEEEEEESSSSC-HH----------------------------HHH
T ss_pred CCEEEEecCCcc---cCCCHHHHHHHHHHHHHCCCeEEEeeCCCCC-HH----------------------------HHH
Confidence 456666665432 23466789999999999999999998 4431 11 111
Q ss_pred HHHHHHHhcCCCEEEEcCCCHHH-HHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHH
Q 014320 274 RAIRLAEFVNTPLYVVHVMSMDA-MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKAL 352 (427)
Q Consensus 274 ~~~~~~~~~g~~~~i~H~~~~~~-~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l 352 (427)
.++. ..+.. .|.|...... -++++.++++|+.+.+ ||......... + .+ ...| +
T Consensus 211 ~al~---~lg~~-rIgHgv~l~~d~~l~~~l~~~~i~le~--cP~SN~~l~~~---~------~~-~~hP---------i 265 (343)
T 3rys_A 211 EALD---VLHVE-RIDHGIRCMEDTDVVQRLVAEQVPLTV--CPLSNVRLRAV---D------KL-ADHP---------L 265 (343)
T ss_dssp HHHH---TSCCS-EEEECGGGGGCHHHHHHHHHHTCCEEE--CHHHHHHTTSS---S------CG-GGCS---------H
T ss_pred HHHh---cCCcc-eeeeeeeecCChHHHHHHHhcCCCeeE--chhHHHHhCCC---C------Cc-ccch---------H
Confidence 1121 12332 4788866431 3678889999987775 77643222110 0 00 0133 5
Q ss_pred HHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhc
Q 014320 353 QAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGR 425 (427)
Q Consensus 353 ~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~ 425 (427)
.++++.|++++|+||...+... .+. -|+.+. ...-+++.+++ +.++.|+.+
T Consensus 266 ~~ll~~Gv~V~l~TDdp~~~~~-~l~--------------~E~~~a------~~~~~l~~~~l-~~l~~nsi~ 316 (343)
T 3rys_A 266 PEMLAIGLNVCVNSDDPAYFGG-YVD--------------DNFEQL------VKVLEFSVPEQ-ATLAANSIR 316 (343)
T ss_dssp HHHHHTTCCEEECCBSTTTTTC-CHH--------------HHHHHH------HHHHCCCHHHH-HHHHHHHHH
T ss_pred HHHHHCCCeEEEeCCCccccCC-CHH--------------HHHHHH------HHHcCCCHHHH-HHHHHHHHH
Confidence 6699999999999996433221 110 122222 22236999995 555677754
No 89
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=98.13 E-value=2.6e-05 Score=72.60 Aligned_cols=126 Identities=10% Similarity=0.021 Sum_probs=67.1
Q ss_pred cccccccccccCcCCC------CChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhcc---ccceeceecc
Q 014320 106 GGIDPHTHLAMEFMGS------ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKN---SCMDYGFHMA 176 (427)
Q Consensus 106 G~ID~H~H~~~~~~g~------~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 176 (427)
.+||+|+|+....... ....+.......+.+.||+.++..+.. .+..+...+...+ ....+++|..
T Consensus 2 ~~iD~H~Hl~~~~~~~~~~~~~~h~~d~~~vl~~~~~~GV~~~v~~~~~-----~~~~~~~~~la~~~~~v~~~~GiHP~ 76 (301)
T 2xio_A 2 KFIDIGINLTDPMFRGIYRGVQKHQDDLQDVIGRAVEIGVKKFMITGGN-----LQDSKDALHLAQTNGMFFSTVGCHPT 76 (301)
T ss_dssp CEEEEEECTTCGGGGTEETTEECSCCCHHHHHHHHHHHTEEEEEECCCS-----HHHHHHHHHHHTTCTTEEEEECCCGG
T ss_pred eEEEEcCCCCChHhcccccccccCccCHHHHHHHHHHCCCCEEEEeCCC-----HHHHHHHHHHHHHCCCEEEEEEECcC
Confidence 5899999997652210 000233344566778899999876421 1222232333322 2223333322
Q ss_pred ccC-C----ChhhHHHHHHHHHHc--CCCeEE-EEEecCCCc----cCCHHHHHHHHHHHHHcCCcEEEecC
Q 014320 177 ITK-W----DEVVSDEMEVMVKEK--GINSFK-FFMAYKGSF----MINDELLIEGFKRCKSLGALAMVHAE 236 (427)
Q Consensus 177 ~~~-~----~~~~~~~~~~l~~~~--g~~~ik-~~~~~~~~~----~~~~~~l~~~~~~a~~~g~~v~~H~e 236 (427)
... . .++.++++++++... .+..|+ +.+++.... ....+.++..++.|+++|+||.+|+.
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~aIGEiGLd~~~~~~~~~~~Q~~~f~~ql~lA~~~~lPv~iH~r 148 (301)
T 2xio_A 77 RCGEFEKNNPDLYLKELLNLAENNKGKVVAIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHCR 148 (301)
T ss_dssp GTHHHHHHCHHHHHHHHHHHHHTCTTTEEEEEEEEEETTCTTTSCHHHHHHHHHHTHHHHHHHCCCEEEEEE
T ss_pred hhhhCcccccHHHHHHHHHHHhcCCCCeEEEEEeeCCCCcCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEec
Confidence 110 0 013356666666322 344554 345543211 11235788999999999999999984
No 90
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=98.12 E-value=1.6e-05 Score=74.60 Aligned_cols=152 Identities=13% Similarity=0.023 Sum_probs=87.5
Q ss_pred cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHH
Q 014320 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATT 273 (427)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~ 273 (427)
.++.++.+.-+. ...+.+.++++++.|++.|+++++|+ |... ... +.
T Consensus 160 ~~vvG~dL~g~E---~~~~~~~~~~~~~~A~~~gl~~~~HagE~~~-~~~----------------------------i~ 207 (326)
T 3pao_A 160 DAFIAVGLDSSE---VGHPPSKFQRVFDRARSEGFLTVAHAGEEGP-PEY----------------------------IW 207 (326)
T ss_dssp GGCSEEEEESCC---TTCCGGGGHHHHHHHHHTTCEECEEESSSSC-HHH----------------------------HH
T ss_pred ccceeeCCCCCC---CCCCHHHHHHHHHHHHHcCCceeeecCCCCC-HHH----------------------------HH
Confidence 356677665432 23456789999999999999999998 4431 111 11
Q ss_pred HHHHHHHhcCCCEEEEcCCCHH-HHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHH
Q 014320 274 RAIRLAEFVNTPLYVVHVMSMD-AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKAL 352 (427)
Q Consensus 274 ~~~~~~~~~g~~~~i~H~~~~~-~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l 352 (427)
.+++ ..+.. .+.|..... .-++++.++++|+.+.+ ||......... +++ ...| +
T Consensus 208 ~al~---~lg~~-rigHgv~l~~d~~l~~~l~~~~i~le~--cP~SN~~l~~~---~~~-------~~hP---------i 262 (326)
T 3pao_A 208 EALD---LLKVE-RIDHGVRAFEDERLMRRLIDEQIPLTV--CPLSNTKLCVF---DDM-------SQHT---------I 262 (326)
T ss_dssp HHHH---TTCCS-SEEECGGGGGCHHHHHHHHHHTCCEEE--CHHHHHHTTSS---SSG-------GGCC---------H
T ss_pred HHHh---cCCCc-eeeeeeeecccHHHHHHHHHcCCeEEE--CchhHHHhCCC---CCc-------ccCh---------H
Confidence 1111 12222 267776543 12678889999988775 77643222110 000 0234 5
Q ss_pred HHHHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhc
Q 014320 353 QAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGR 425 (427)
Q Consensus 353 ~~~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~ 425 (427)
.++++.|++++|+||...+... .+ .-|+.+ ....-+++.+++ +.++.|+++
T Consensus 263 ~~ll~~Gv~V~l~TDdp~~~~~-~l--------------~~e~~~------a~~~~~l~~~~l-~~l~~nsi~ 313 (326)
T 3pao_A 263 LDMLERGVKVTVNSDDPAYFGG-YV--------------TENFHA------LQQSLGMTEEQA-RRLAQNSLD 313 (326)
T ss_dssp HHHHHHTCCEEECCBSHHHHTC-CH--------------HHHHHH------HHHHHCCCHHHH-HHHHHHHHH
T ss_pred HHHHHCCCeEEEeCCCcccCCC-CH--------------HHHHHH------HHHHcCCCHHHH-HHHHHHHHH
Confidence 6688999999999996322111 11 012222 222337999995 666788765
No 91
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=98.04 E-value=5.6e-06 Score=79.39 Aligned_cols=139 Identities=14% Similarity=0.054 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 214 DELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 214 ~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
++.++.+++.|+++|+++++|+ |... | .| . ..+..++. ..|.. .+.|+.
T Consensus 214 ~~~~~~~~~~A~~~gl~~~~HagE~~~------------~----------~~-~---~~i~~al~---~lg~~-ri~Hgv 263 (371)
T 2pgf_A 214 LKEYKEIFDYVRESGVPLSVHAGEDVT------------L----------PN-L---NTLYSAIQ---VLKVE-RIGHGI 263 (371)
T ss_dssp GGGGHHHHHHHHHTTCCBEEEESCCTT------------S----------SS-S---HHHHHHHH---TSCCS-EEEECG
T ss_pred HHHHHHHHHHHHHcCCcEEEeeCCCCC------------C----------Cc-h---HHHHHHHh---ccCCC-EEecch
Confidence 6789999999999999999998 5420 0 00 0 01111111 22444 588887
Q ss_pred CHHH-HHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCCCCC
Q 014320 293 SMDA-MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF 371 (427)
Q Consensus 293 ~~~~-~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~~p~ 371 (427)
.... -++++.++++|+.+.+ ||......... ..+ ..+| +.++++.|+.++||||....
T Consensus 264 ~l~~~~~l~~~l~~~~i~v~~--cP~SN~~l~~~---------~~~-~~~p---------i~~ll~~Gv~V~lgTD~~~~ 322 (371)
T 2pgf_A 264 RVAESQELIDMVKEKNILLEV--CPISNVLLKNA---------KSM-DTHP---------IRQLYDAGVKVSVNSDDPGM 322 (371)
T ss_dssp GGGGCHHHHHHHHHTTCEEEE--CHHHHHHTTSS---------SCG-GGCT---------HHHHHHTTCEEEECCBCHHH
T ss_pred hccccHHHHHHHHHcCCeEEE--CcchhHHhCCC---------Ccc-ccCh---------HHHHHHCCCeEEEeCCCCcc
Confidence 6432 2458889999987765 87643221110 000 1134 56699999999999996321
Q ss_pred ChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhc
Q 014320 372 NSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGR 425 (427)
Q Consensus 372 ~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~ 425 (427)
..... .-|+.+.. ...+++.+++ +.+|.|+++
T Consensus 323 -~~~~l--------------~~e~~~a~------~~~~l~~~~l-~~lt~ns~~ 354 (371)
T 2pgf_A 323 -FLTNI--------------NDDYEELY------THLNFTLEDF-MKMNEWALE 354 (371)
T ss_dssp -HTCCH--------------HHHHHHHH------HHHCCCHHHH-HHHHHHHHH
T ss_pred -cCCCH--------------HHHHHHHH------HHhCCCHHHH-HHHHHHHHH
Confidence 11111 01222222 2237999996 778899876
No 92
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=97.84 E-value=0.00044 Score=64.22 Aligned_cols=96 Identities=11% Similarity=0.081 Sum_probs=63.4
Q ss_pred HHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccccccCC
Q 014320 185 SDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALSRP 264 (427)
Q Consensus 185 ~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~~p 264 (427)
.++++++. ..|+.++++..........+++.+..+++.+.+ |+++.+|+.... +
T Consensus 109 ~~eL~~l~-~~G~rGvR~~~~~~~~~~~~~~~~~~~~~~l~~-gl~v~l~~~~~~-l----------------------- 162 (303)
T 4d9a_A 109 EAELAALH-EGGMRGIRFNFLKRLVDDAPKDKFLEVAGRLPA-GWHVVIYFEADI-L----------------------- 162 (303)
T ss_dssp HHHHHHHH-HTTEEEEEEECCTTTCSCCCHHHHHHHHTSCCT-TCEEEEECCGGG-H-----------------------
T ss_pred HHHHHHHH-HCCCCEEEeecccCCccccCHHHHHHHHHHHhc-CCEEEEeccccc-H-----------------------
Confidence 35667765 569999998765432245788999999999999 999999975432 1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEcCCCH--------HHH-HHHHHHhhcCCCEEEecC
Q 014320 265 PLLEGEATTRAIRLAEFVNTPLYVVHVMSM--------DAM-EEIAKARKAGQRVIGEPV 315 (427)
Q Consensus 265 ~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~--------~~~-~~i~~~~~~G~~v~~~~~ 315 (427)
....+++++.++++.+.|+... ... +.++.+++.+ +|++.++
T Consensus 163 --------~~l~~~~~~~~~~iVidH~G~p~~~~g~~~~~~~~~~~l~~~~~-NV~vKlS 213 (303)
T 4d9a_A 163 --------EELRPFMDAIPVPIVIDHMGRPDVRQGPDGADMKAFRRLLDSRE-DIWFKAT 213 (303)
T ss_dssp --------HHHHHHHHHCSSCEEEGGGGCCCGGGCTTSHHHHHHHHHHHHCT-TEEEECC
T ss_pred --------HHHHHHHHHCCCcEEEeCCCCCCcccCCCCHHHHHHHHHHhhCC-CEEEEee
Confidence 1223445555889999998741 122 3344444433 6887666
No 93
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=97.72 E-value=0.00045 Score=65.65 Aligned_cols=100 Identities=16% Similarity=0.092 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCC
Q 014320 215 ELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS 293 (427)
Q Consensus 215 ~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~ 293 (427)
+.+..+++.|++.|+++++|+ |.... .. +..++. ..+.. .|.|...
T Consensus 192 ~~f~~~f~~A~~~gl~~~~HagE~~~~-~~----------------------------i~~al~---~lg~~-RIgHgv~ 238 (367)
T 3iar_A 192 PGHVQAYQEAVKSGIHRTVHAGEVGSA-EV----------------------------VKEAVD---ILKTE-RLGHGYH 238 (367)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESSSSCH-HH----------------------------HHHHHH---TSCCS-EEEECGG
T ss_pred HHHHHHHHHHHHcCCeeEEecCCcCCh-HH----------------------------HHHHHH---ccCCc-eeeeeee
Confidence 688999999999999999998 44321 11 111111 22333 4788865
Q ss_pred HH-HHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCC
Q 014320 294 MD-AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDH 368 (427)
Q Consensus 294 ~~-~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~ 368 (427)
.. .-++++.++++|+.+.+ ||.........- .+ ... .+.++++.|+.++|+||.
T Consensus 239 l~~d~~l~~~l~~~~i~le~--cP~SN~~l~~~~---------~~-~~h---------Pi~~ll~~Gv~v~l~TDd 293 (367)
T 3iar_A 239 TLEDQALYNRLRQENMHFEI--CPWSSYLTGAWK---------PD-TEH---------AVIRLKNDQANYSLNTDD 293 (367)
T ss_dssp GGGCHHHHHHHHHTTCEEEE--CHHHHHHTSSSC---------TT-SCC---------HHHHHHHTTCCEEECCBS
T ss_pred ecCCHHHHHHHHhCCcEEEE--CHHHHHHhCCCC---------Cc-ccC---------hHHHHHHCCCEEEECCCC
Confidence 42 12678889999976665 886432221100 00 012 367789999999999995
No 94
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=97.65 E-value=0.00016 Score=67.35 Aligned_cols=53 Identities=8% Similarity=0.119 Sum_probs=36.3
Q ss_pred hHHHHHHHHHHcCCCeEEEEEecCCCc--cCCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 184 VSDEMEVMVKEKGINSFKFFMAYKGSF--MINDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 184 ~~~~~~~l~~~~g~~~ik~~~~~~~~~--~~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
..++++++. ..|+.+|+....+...+ ...++.+...++.++++|+++.+|...
T Consensus 90 ~~~~L~~l~-~~gv~Gir~~~~~~~~~~~~~~~~~~~~~~~~~~~~glpv~ih~~~ 144 (303)
T 4do7_A 90 LAERVAEWR-GTKLRGFRHQLQDEADVRAFVDDADFARGVAWLQANDYVYDVLVFE 144 (303)
T ss_dssp HHHHHTTCC-SSCEEEEECCGGGSSCHHHHHHCHHHHHHHHHHHHTTCEEEECCCG
T ss_pred HHHHHHHHh-hcCceEEEecCcCCCCccccccCHHHHHHHHHHHHCCCeEEEecCH
Confidence 455666655 56777777653322111 244567889999999999999999754
No 95
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=97.50 E-value=0.0018 Score=58.60 Aligned_cols=164 Identities=13% Similarity=0.061 Sum_probs=86.2
Q ss_pred ccccccccccCcCCCCChhhHHHHHHHHHcCCceEEecCcCCCCC--cH---HHHHHHHHH----Hh----ccccceece
Q 014320 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHIDFVIPING--SL---TAGFEAYEK----KA----KNSCMDYGF 173 (427)
Q Consensus 107 ~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~--~~---~~~~~~~~~----~~----~~~~~~~~~ 173 (427)
+||+|+|+... . .+ ....+...||+.++..+..... .. .+.++...+ .. .+.+..+|+
T Consensus 2 ~iDtH~Hld~~--~---~~----~l~~a~~~GV~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~~~v~~~~Gi 72 (261)
T 3guw_A 2 YFDSHLHSEGL--G---FS----ELVKLKENGIKEVCSLAFFPVKPKYPQTMIDVFRKLTEFEPLRCEAAGVKMHPAVGI 72 (261)
T ss_dssp CCBCCCCGGGC--C---HH----HHHHHHTTSCCEECCBCCCSSCCSSHHHHHHHHHHHHHTHHHHHHTTTCEECCBCCC
T ss_pred eEEeccCCCCC--C---hH----HHHHHHHCCCcEEEEeccCccccchhhhHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
Confidence 79999999764 1 12 2456788999999865432211 11 122222221 11 123344555
Q ss_pred eccccCCChhhHHHHHHHHHHcCCCeEE-EEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcC
Q 014320 174 HMAITKWDEVVSDEMEVMVKEKGINSFK-FFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELG 252 (427)
Q Consensus 174 ~~~~~~~~~~~~~~~~~l~~~~g~~~ik-~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G 252 (427)
|..... + ..++..+.++...+..|. +.+++. .....+.+++.++.|+++++||.+|+.....
T Consensus 73 HP~~~~--~-~~~~~~~~l~~~~vvaIGEiGLD~~--~~~Q~~~f~~ql~lA~e~~lPv~iH~r~~~~------------ 135 (261)
T 3guw_A 73 HPRCIP--P-DYEFVLGYLEEGEWVAFGEIGLELV--TDEEIEVLKSQLELAKRMDVPCIIHTPRGNK------------ 135 (261)
T ss_dssp CGGGCC--T-TTHHHHHHHTTSCCSCEEEEECSSC--CHHHHHHHHHHHHHHHHHTCCEEEECCSSST------------
T ss_pred Cccccc--c-cHHHHHHHhCcCCeEEEEEecCCCC--hHHHHHHHHHHHHHHHHhCCeEEEEcCCCcc------------
Confidence 543221 1 112222333235566664 445543 1122456889999999999999999864310
Q ss_pred CCCcccccccCCHHHHHHHHHHHHHHHHhcC---CCEEEEcCCCHHHHHHHHHHhhcCCCEEEecCc
Q 014320 253 ITGPEGHALSRPPLLEGEATTRAIRLAEFVN---TPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVV 316 (427)
Q Consensus 253 ~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g---~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p 316 (427)
.++..+.+++.++.+ .+..+.|++ .+.++++.+.|..+...+.|
T Consensus 136 ----------------~~a~~~~~~il~~~~~~~~~~vi~H~~----~~~a~~~l~~G~yis~~~~p 182 (261)
T 3guw_A 136 ----------------LKATRKTLEILESLDFPADLAVIDHVN----FETLDMVLETEYWIGLTVQP 182 (261)
T ss_dssp ----------------THHHHHHHHHHHHTTCCTTSEEEESCC----TTTHHHHHTSSSEEEEECC-
T ss_pred ----------------cchHHHHHHHHHHcCCCCCCEEEEeCC----HHHHHHHHhCCEEEEecCCC
Confidence 011222333344433 235577983 34566677788777665444
No 96
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=97.14 E-value=0.00053 Score=64.22 Aligned_cols=55 Identities=11% Similarity=0.070 Sum_probs=42.7
Q ss_pred hhHHHHHHHHHHcCCCeEEEEEecCC-----CccCCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 183 VVSDEMEVMVKEKGINSFKFFMAYKG-----SFMINDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 183 ~~~~~~~~l~~~~g~~~ik~~~~~~~-----~~~~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
+..++++++++..|+.++++...+.. ....+++.+..+++.|.++|++|.+|+.+
T Consensus 108 ~~~~el~~~~~~~g~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~~ 167 (327)
T 2dvt_A 108 AATEELQRCVNDLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKLDVPFYLHPRN 167 (327)
T ss_dssp HHHHHHHHHHHTTCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHHTCCEEEECCC
T ss_pred HHHHHHHHHHhcCCceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHcCCeEEECCCC
Confidence 46778888875569999987766531 23456788999999999999999999753
No 97
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=96.89 E-value=0.015 Score=53.39 Aligned_cols=55 Identities=13% Similarity=0.201 Sum_probs=42.2
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCC-CccCCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKG-SFMINDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~-~~~~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
++..+++++ +...|+.++++...+.+ ....+++.+..+++.|.++|++|.+|+..
T Consensus 105 ~~a~~eL~~-~~~~g~~Gi~~~~~~~~~~~~~~d~~~~~~~~~a~e~glpv~iH~~~ 160 (291)
T 3irs_A 105 KEAMAQMQE-ILDLGIRIVNLEPGVWATPMHVDDRRLYPLYAFCEDNGIPVIMMTGG 160 (291)
T ss_dssp HHHHHHHHH-HHHTTCCCEEECGGGSSSCCCTTCGGGHHHHHHHHHTTCCEEEECSS
T ss_pred HHHHHHHHH-HHhCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHcCCeEEEeCCC
Confidence 456777888 55789999998754421 23356788999999999999999999854
No 98
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=96.87 E-value=0.0025 Score=58.99 Aligned_cols=55 Identities=9% Similarity=0.168 Sum_probs=43.0
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
++..++++++++..|+.++++...+.+ ...+++.+..+++.|.++|++|.+|+..
T Consensus 103 ~~~~~el~~~~~~~g~~gi~~~~~~~~-~~~~~~~~~~~~~~a~~~~lpv~iH~~~ 157 (307)
T 2f6k_A 103 LDAVKTVQQALDQDGALGVTVPTNSRG-LYFGSPVLERVYQELDARQAIVALHPNE 157 (307)
T ss_dssp HHHHHHHHHHHHTSCCSEEEEESEETT-EETTCGGGHHHHHHHHTTTCEEEEECCC
T ss_pred HHHHHHHHHHHhccCCcEEEEeccCCC-CCCCcHhHHHHHHHHHHcCCeEEECCCC
Confidence 456778888775579999988776543 2345678999999999999999999854
No 99
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=96.49 E-value=0.012 Score=56.13 Aligned_cols=121 Identities=16% Similarity=0.122 Sum_probs=67.5
Q ss_pred cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec-CChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHH
Q 014320 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATT 273 (427)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~ 273 (427)
.++.+|.+..+.. ...++.+..+++.|++.|+++.+|+ |.....+ .+.
T Consensus 180 ~~VvG~dL~g~E~---~~p~~~f~~~f~~ar~~Gl~~t~HAGE~~~p~~----------------------------~i~ 228 (380)
T 4gxw_A 180 DEVAGIGIDYREN---DRPPELFWKAYRDARAAGFRTTAHAGEFGMPWR----------------------------NVE 228 (380)
T ss_dssp TTBCEEEEESCCT---TCCGGGGHHHHHHHHHTTCEEEEEESCTTCCHH----------------------------HHH
T ss_pred CCEEEEeecCCCC---CCCHHHHHHHHHHHHHcCCCeeeeccccCCchH----------------------------HHH
Confidence 3455665543322 2345678899999999999999998 5321111 111
Q ss_pred HHHHHHHhcCCCEEEEcCCCH-HHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHH
Q 014320 274 RAIRLAEFVNTPLYVVHVMSM-DAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKAL 352 (427)
Q Consensus 274 ~~~~~~~~~g~~~~i~H~~~~-~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l 352 (427)
.++. ..|+ -.|.|.... +.-++++.++++|+.+. +||........... ....-.-|+
T Consensus 229 ~al~---~lga-~RIgHG~~~~~d~~L~~~l~~~~I~lE--vCP~SN~~l~~v~~-------~~~~~~HP~--------- 286 (380)
T 4gxw_A 229 TAVD---LLHV-DRVDHGYTIVDNPELCARYAERGIVFT--VVPTNSYYLRTLPP-------DQWAERHPM--------- 286 (380)
T ss_dssp HHHH---TSCC-SEEEECGGGGGCHHHHHHHHHHTCEEE--ECTTCHHHHHHSCT-------TTHHHHCGG---------
T ss_pred HHHH---HcCC-cccccceeeccChHHHHHHHHhCceeE--ECCcchhhhccccc-------ccccccChH---------
Confidence 2221 1222 246676442 22367888888887665 58853321111000 000001244
Q ss_pred HHHHhcCCceEEecCC
Q 014320 353 QAALATGILQLVGTDH 368 (427)
Q Consensus 353 ~~~l~~G~~~~lgSD~ 368 (427)
..+++.|+.++|+||.
T Consensus 287 ~~l~~~Gv~vtinTDD 302 (380)
T 4gxw_A 287 RKMPGLGLKIHPNTDD 302 (380)
T ss_dssp GGTGGGTCEEEECCBS
T ss_pred HHHHHCCCeEEECCCC
Confidence 4488999999999995
No 100
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=95.90 E-value=0.074 Score=50.74 Aligned_cols=130 Identities=12% Similarity=0.037 Sum_probs=71.3
Q ss_pred ccccccccccccCcCC------CCChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhcc-----ccceece
Q 014320 105 PGGIDPHTHLAMEFMG------SETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKN-----SCMDYGF 173 (427)
Q Consensus 105 PG~ID~H~H~~~~~~g------~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 173 (427)
+-|||+|+|+..+.+. ....+++..-...|...||+.++..+.... .....++..++ -+. .+..+|+
T Consensus 12 ~~~iDih~nL~d~~f~g~y~~~~~h~~D~~~vl~rA~~~GV~~ii~~g~~l~-~s~~~~~La~~-~~~~~~~~l~~tvGv 89 (401)
T 3e2v_A 12 LKYYDIGLNLTDPMFHGIYNGKQYHPADYVKLLERAAQRHVKNALVTGSSIA-ESQSAIELVSS-VKDLSPLKLYHTIGV 89 (401)
T ss_dssp CCEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECCCSHH-HHHHHHHHHHH-HTTTCSSEEEEEECC
T ss_pred CCeEEEEeCcCcHHHhhhccccccCccCHHHHHHHHHHCCCCEEEEecCCHH-HHHHHHHHHHH-CCCccccceEEEEEE
Confidence 4699999999876321 112345555577788899999986542211 22222222222 122 2445566
Q ss_pred ecccc-CCCh------------------------------------hhHHHHHHHHHH------cCCCeEE-EEEecCCC
Q 014320 174 HMAIT-KWDE------------------------------------VVSDEMEVMVKE------KGINSFK-FFMAYKGS 209 (427)
Q Consensus 174 ~~~~~-~~~~------------------------------------~~~~~~~~l~~~------~g~~~ik-~~~~~~~~ 209 (427)
|.... ...+ +.++++.+++.. ..+..|. +.+++...
T Consensus 90 HP~~~~e~~~~~~~~~~~~~~~~p~~d~~~~~~l~~~~~~~~~~~~~~l~~L~~l~~~~~~~~~~~vvAIGEiGLDy~~~ 169 (401)
T 3e2v_A 90 HPCCVNEFADASQGDKASASIDNPSMDEAYNESLYAKVISNPSFAQGKLKELYDLMNQQAKPHDTSFRSIGEIGLDYDRF 169 (401)
T ss_dssp CGGGGGGGC------------------CHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHCSTTCSEEEEEEEEEETTCT
T ss_pred CcChhhhcccccccccccccccccccccccccccccccccccccchHHHHHHHHHHHhhhhccCCcEEEEEEEeCCCCcC
Confidence 54221 1111 125556665532 2234444 45666321
Q ss_pred ccC----CHHHHHHHHHHHHHc----CCcEEEecC
Q 014320 210 FMI----NDELLIEGFKRCKSL----GALAMVHAE 236 (427)
Q Consensus 210 ~~~----~~~~l~~~~~~a~~~----g~~v~~H~e 236 (427)
... -.+.+++.++.|+++ ++||.+|+-
T Consensus 170 ~~~~~e~Q~~~F~~QL~LA~e~~~~~~lPv~IH~R 204 (401)
T 3e2v_A 170 HYSSKEMQKVFFEEQLKISCLNDKLSSYPLFLHMR 204 (401)
T ss_dssp TTSCHHHHHHHHHHHHHHTTSSHHHHTSCEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHhhhccCCCeEEEEec
Confidence 111 235678889999999 999999984
No 101
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=94.73 E-value=0.11 Score=48.45 Aligned_cols=55 Identities=24% Similarity=0.278 Sum_probs=43.0
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
++..++++++++..|+.++++...+.+ ...+++.+..+++.+.++|++|.+|+..
T Consensus 123 ~~a~~el~~~~~~~g~~Gv~l~~~~~~-~~l~d~~~~~~~~~~~e~~lpv~iH~~~ 177 (336)
T 2wm1_A 123 ELAVKEMERCVKELGFPGVQIGTHVNE-WDLNAQELFPVYAAAERLKCSLFVHPWD 177 (336)
T ss_dssp HHHHHHHHHHHHTSCCSEEEEESEETT-EETTCGGGHHHHHHHHHHTCEEEEECCS
T ss_pred HHHHHHHHHHHHccCCeEEEECCcCCC-CCCCCccHHHHHHHHHHcCCEEEECCCC
Confidence 356778888875579999987655443 3456778999999999999999999853
No 102
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=94.64 E-value=0.24 Score=46.18 Aligned_cols=54 Identities=15% Similarity=0.134 Sum_probs=43.2
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
+...++++++. ..|+.++++.....+ ...+++.+..+++.+.++|++|.+|+..
T Consensus 127 ~~a~~el~~~~-~~g~~Gv~l~~~~~~-~~l~d~~~~p~~~~~~e~~lpv~iH~~~ 180 (334)
T 2hbv_A 127 DLACKEASRAV-AAGHLGIQIGNHLGD-KDLDDATLEAFLTHCANEDIPILVHPWD 180 (334)
T ss_dssp HHHHHHHHHHH-HHTCCCEEEESCBTT-BCTTSHHHHHHHHHHHHTTCCEEEECCS
T ss_pred HHHHHHHHHHH-HcCCeEEEECCCCCC-CCCCcHHHHHHHHHHHHCCCEEEECCCC
Confidence 35677888888 789999987665443 3457789999999999999999999854
No 103
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=94.51 E-value=0.32 Score=43.18 Aligned_cols=39 Identities=21% Similarity=0.300 Sum_probs=29.2
Q ss_pred ccccccccccccCc-CCCCChhhHHHHHHHHHcCCceEEe
Q 014320 105 PGGIDPHTHLAMEF-MGSETIDDFFSGQAAALAGGTTMHI 143 (427)
Q Consensus 105 PG~ID~H~H~~~~~-~g~~~~e~~~~~~~~~l~~GvTtv~ 143 (427)
.|++|.|+|..... .|..+.++.....+.|...|++.+.
T Consensus 3 ~~m~D~H~Ht~~~~ddg~~~~e~~~e~i~~A~~~Gi~~i~ 42 (247)
T 2wje_A 3 MGMIDIHSHIVFDVDDGPKSREESKALLAESYRQGVRTIV 42 (247)
T ss_dssp -CEEECCBCCSTTSSSSCSSHHHHHHHHHHHHHTTEEEEE
T ss_pred CCCEEEecccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
Confidence 46899999984331 3556667666678999999999887
No 104
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A*
Probab=94.22 E-value=0.075 Score=52.42 Aligned_cols=106 Identities=16% Similarity=0.072 Sum_probs=62.5
Q ss_pred CHHHHHHHHHH--HHHcCCcEEEec-CChhhHHHHHHHHHHcCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEE
Q 014320 213 NDELLIEGFKR--CKSLGALAMVHA-ENGDAVFEGQKRMIELGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV 289 (427)
Q Consensus 213 ~~~~l~~~~~~--a~~~g~~v~~H~-e~~~~~~~~~~~l~~~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~ 289 (427)
+.+.+..+++. |++.|+++.+|+ |.... |. .++ ..+..++. .|.. .|.
T Consensus 307 p~~~f~~~f~~~~A~~~gl~~t~HAGE~~~~-----------g~---------~~~----~~i~~Al~----Lga~-RIg 357 (508)
T 3lgd_A 307 SLHDYKEALMIPAKDGVKLPYFFHAGETDWQ-----------GT---------SID----RNILDALM----LNTT-RIG 357 (508)
T ss_dssp CTGGGHHHHTHHHHTTCCCCBCCEECCSSCC-----------SS---------TTT----THHHHHHH----TTCS-SEE
T ss_pred CHHHHHHHHHHHHHHHcCCceeeecccccCC-----------CC---------CcH----HHHHHHHh----cCCc-eee
Confidence 45567778877 888999999998 54210 00 000 11222221 2322 378
Q ss_pred cCCCHH-HHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEecCC
Q 014320 290 HVMSMD-AMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDH 368 (427)
Q Consensus 290 H~~~~~-~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgSD~ 368 (427)
|..... .-++++.++++|+.+.+ ||......... ++ + ...| +.++++.|++++|+||.
T Consensus 358 HGv~l~~dp~l~~~l~~~~I~lev--CP~SN~~l~~v---~~------~-~~hP---------~~~ll~~Gv~V~l~TDd 416 (508)
T 3lgd_A 358 HGFALSKHPAVRTYSWKKDIPIEV--CPISNQVLKLV---SD------L-RNHP---------VATLMATGHPMVISSDD 416 (508)
T ss_dssp ECTTGGGCHHHHHHHHHTTCCEEE--CHHHHHHTTSC---SS------G-GGCT---------HHHHHHTTCCEEECCBS
T ss_pred eeEecCccHHHHHHHHhcCCeEEE--CcchHHHhCCC---CC------c-ccCh---------HHHHHHCCCcEEEcCCC
Confidence 887653 13678889999987775 77643322110 00 0 1133 56688999999999996
No 105
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=93.22 E-value=0.6 Score=41.84 Aligned_cols=38 Identities=26% Similarity=0.187 Sum_probs=27.9
Q ss_pred ccccccccccC-cCCCCChhhHHHHHHHHHcCCceEEec
Q 014320 107 GIDPHTHLAME-FMGSETIDDFFSGQAAALAGGTTMHID 144 (427)
Q Consensus 107 ~ID~H~H~~~~-~~g~~~~e~~~~~~~~~l~~GvTtv~d 144 (427)
+||.|+|.... -.|..+.++.....+.+.+.|++.+.-
T Consensus 1 m~D~H~H~~~~~ddG~~~~~~sl~~~~~a~~~G~~~i~~ 39 (262)
T 3qy7_A 1 MIDIHCHILPAMDDGAGDSADSIEMARAAVRQGIRTIIA 39 (262)
T ss_dssp CEESSBCCSTTSSSSCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred CEEEeecCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
Confidence 68999998642 125556666555688899999999973
No 106
>2a3l_A AMP deaminase, AMPD; atampd, AT2G38280, adenosine 5'-monophosphate deaminase, COF 5'-phosphate, structural genomics; HET: CF5; 3.34A {Arabidopsis thaliana} SCOP: c.1.9.1
Probab=93.20 E-value=0.031 Score=57.15 Aligned_cols=94 Identities=11% Similarity=-0.069 Sum_probs=54.4
Q ss_pred EEcCCCHHH-HHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcccHHHHHHHHhcCCceEEec
Q 014320 288 VVHVMSMDA-MEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGT 366 (427)
Q Consensus 288 i~H~~~~~~-~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~G~~~~lgS 366 (427)
|.|+..... -.+++.+++.|+.|.+ ||....... ..+ ...| +.++++.|+.++|+|
T Consensus 541 IgHGv~l~edp~Li~lla~~~I~vev--CP~SN~kl~-----------~~~-~~HP---------i~~ll~~Gv~VsLgT 597 (701)
T 2a3l_A 541 IAHGINLRKSPVLQYLYYLAQIGLAM--SPLSNNSLF-----------LDY-HRNP---------FPVFFLRGLNVSLST 597 (701)
T ss_dssp CSCCGGGGGCHHHHHHHHHHTCCEEE--CHHHHTTTT-----------CCS-TTCS---------HHHHHHTTCCEEECC
T ss_pred EEEEeecccCHHHHHHHHHcCCcEEE--Cccchhhhc-----------cCc-hHhH---------HHHHHHCCCcEEEeC
Confidence 566654322 2457888889988776 775332111 111 0123 566899999999999
Q ss_pred CCCCCChhh--hhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhc
Q 014320 367 DHCAFNSTQ--KAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGR 425 (427)
Q Consensus 367 D~~p~~~~~--~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~ 425 (427)
|........ .+. -|+.+... ..+++..++.++ |.|+++
T Consensus 598 Ddp~~~~~t~~dL~--------------~Ey~~aa~------~~~ls~~dl~~l-a~Ns~~ 637 (701)
T 2a3l_A 598 DDPLQIHLTKEPLV--------------EEYSIAAS------VWKLSACDLCEI-ARNSVY 637 (701)
T ss_dssp BCHHHHCCSSSHHH--------------HHHHHHHH------HHTCCHHHHHHH-HHHHHH
T ss_pred CCccccCCCCcCHH--------------HHHHHHHH------HcCCCHHHHHHH-HHHHHH
Confidence 974332211 111 13333322 236999997777 788876
No 107
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=92.30 E-value=0.14 Score=47.35 Aligned_cols=55 Identities=13% Similarity=0.125 Sum_probs=42.9
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
+...++++++++..|..++++.....+ ...+++.+..+.+.+.++|++|.+|+..
T Consensus 110 ~~a~~el~r~~~~~G~~Gv~l~~~~~~-~~l~d~~~~p~~~~~~e~g~pv~iH~g~ 164 (312)
T 3ij6_A 110 ESACKVISSIKDDENLVGAQIFTRHLG-KSIADKEFRPVLAQAAKLHVPLWMHPVF 164 (312)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEESEETT-EETTSTTTHHHHHHHHHTTCCEEEECCC
T ss_pred HHHHHHHHHHHHhCCCceEeccCCCCC-CCCCCccHHHHHHHHHHcCCeEEEcCCC
Confidence 446778888875578889988755443 4457778999999999999999999743
No 108
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=90.70 E-value=0.79 Score=43.12 Aligned_cols=56 Identities=14% Similarity=0.160 Sum_probs=43.7
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCCh
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~ 238 (427)
+...+++++.++..|+.++++...+.+ ...+++.+..+.+.+.++|++|.+|+...
T Consensus 141 ~~a~~El~r~~~~~G~~Gv~l~~~~~~-~~~~d~~~~p~~~~~~e~g~pV~iH~g~~ 196 (357)
T 3nur_A 141 EAAAREFERCINDLGFKGALIMGRAQD-GFLDQDKYDIIFKTAENLDVPIYLHPAPV 196 (357)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEESCBTT-BCTTSGGGHHHHHHHHHHTCCEEEECCCC
T ss_pred HHHHHHHHHHHhhcCceEEEeCCCCCC-CCCCCccHHHHHHHHHhcCCeEEEecCCC
Confidence 456788888775689999998754332 34577889999999999999999998543
No 109
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=85.59 E-value=4.7 Score=35.45 Aligned_cols=42 Identities=10% Similarity=0.002 Sum_probs=25.6
Q ss_pred HHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEe
Q 014320 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH 234 (427)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H 234 (427)
+++.|.+++.++... -....+++.++++.+.++++|+.+..+
T Consensus 39 ~~~~G~~~vEl~~~~-~~~~~~~~~~~~~~~~l~~~gl~i~~~ 80 (257)
T 3lmz_A 39 LERLDIHYLCIKDFH-LPLNSTDEQIRAFHDKCAAHKVTGYAV 80 (257)
T ss_dssp HHHTTCCEEEECTTT-SCTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHhCCCEEEEeccc-CCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 336777777665431 122346667777777777777776555
No 110
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=85.54 E-value=18 Score=31.72 Aligned_cols=44 Identities=16% Similarity=0.184 Sum_probs=30.0
Q ss_pred HHHcCCCeEEEEEecC---CCccCCHHHHHHHHHHHHHcCC-cEEEec
Q 014320 192 VKEKGINSFKFFMAYK---GSFMINDELLIEGFKRCKSLGA-LAMVHA 235 (427)
Q Consensus 192 ~~~~g~~~ik~~~~~~---~~~~~~~~~l~~~~~~a~~~g~-~v~~H~ 235 (427)
+.+.|.+.+.++.... .....+++.+.++.+.++++|+ .+.+|.
T Consensus 23 ~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~h~ 70 (270)
T 3aam_A 23 ATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREASGGLPAVIHA 70 (270)
T ss_dssp HHHHTCSCEEEESSCTTCCSCCCCCHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred HHHcCCCEEEEeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCceEEEec
Confidence 3367888887755321 1123457788888888888888 888885
No 111
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=84.96 E-value=4.5 Score=35.67 Aligned_cols=41 Identities=17% Similarity=0.164 Sum_probs=25.6
Q ss_pred HcCCCeEEEEEecC------C---CccCCHHHHHHHHHHHHHcCCcEEEe
Q 014320 194 EKGINSFKFFMAYK------G---SFMINDELLIEGFKRCKSLGALAMVH 234 (427)
Q Consensus 194 ~~g~~~ik~~~~~~------~---~~~~~~~~l~~~~~~a~~~g~~v~~H 234 (427)
+.|.+.+.++.... + ....+++.+.++.+.++++|+.+..|
T Consensus 33 ~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~ 82 (262)
T 3p6l_A 33 ELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGT 82 (262)
T ss_dssp HTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEE
Confidence 67777776654210 0 22345667777777777788777666
No 112
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=84.50 E-value=20 Score=31.39 Aligned_cols=34 Identities=18% Similarity=0.163 Sum_probs=25.0
Q ss_pred ccccccccccCcCCCCChhhHHHHHHHHHcCCceEEe
Q 014320 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (427)
Q Consensus 107 ~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~ 143 (427)
++|.|+|...+..|..+.+++ .+.|.+.|++.+.
T Consensus 1 ~~DlH~Ht~~S~DG~~~~ee~---v~~A~~~Gl~~ia 34 (267)
T 2yxo_A 1 MVDSHVHTPLCGHAEGHPEAY---LEEARAKGLKGVV 34 (267)
T ss_dssp CEEEEECCGGGSSCCSCHHHH---HHHHHHTTCSEEE
T ss_pred CCccCcCcCCCCCCCCCHHHH---HHHHHHcCCCEEE
Confidence 589999986553455566654 7788899998775
No 113
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=83.38 E-value=3.1 Score=38.69 Aligned_cols=56 Identities=23% Similarity=0.278 Sum_probs=43.6
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCC----CccCCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKG----SFMINDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~----~~~~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
++..++++++++..|+.++++..++.+ ....+++.+..+++.|.++|++|.+|+..
T Consensus 122 ~~a~~eL~r~~~~~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e~~lpv~iH~~~ 181 (350)
T 2gwg_A 122 KTCIPELEKCVKEYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVELEIPAMIHVST 181 (350)
T ss_dssp GGGHHHHHHHHHTSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHHHTCCEEECCCC
T ss_pred HHHHHHHHHHHhccCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHHcCCeEEECCCC
Confidence 566788888886679999987655332 12357788999999999999999999854
No 114
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=80.22 E-value=25 Score=31.52 Aligned_cols=119 Identities=17% Similarity=0.204 Sum_probs=69.9
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecC--CCccC-CHHHHHHHHHHHHH----cCCcEEEecCChhhHHHHHHHHHHcCCC
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYK--GSFMI-NDELLIEGFKRCKS----LGALAMVHAENGDAVFEGQKRMIELGIT 254 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~--~~~~~-~~~~l~~~~~~a~~----~g~~v~~H~e~~~~~~~~~~~l~~~G~~ 254 (427)
+..++..++++ +.|++.|.+..... +...+ ..++++++....+. .+++++++....+.++.++ +.|..
T Consensus 38 ~~a~~~a~~~v-~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~piSIDT~~~~va~aAl----~aGa~ 112 (282)
T 1aj0_A 38 IDAVKHANLMI-NAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKPEVIRESA----KVGAH 112 (282)
T ss_dssp HHHHHHHHHHH-HHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHH----HTTCC
T ss_pred HHHHHHHHHHH-HCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCeEEEeCCCHHHHHHHH----HcCCC
Confidence 34555566666 78999999876432 21222 35666555444433 3999999998887665443 33543
Q ss_pred Cccccc-ccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCC---C----------------HHHHHHHHHHhhcCCC---EE
Q 014320 255 GPEGHA-LSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM---S----------------MDAMEEIAKARKAGQR---VI 311 (427)
Q Consensus 255 ~~~~~~-~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~---~----------------~~~~~~i~~~~~~G~~---v~ 311 (427)
-..... ... .+.+.+++++++++.+.|.. . ..-.+.++.+.+.|++ +.
T Consensus 113 iINdvsg~~d---------~~~~~~~a~~~~~vVlmh~~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~~~Gi~~~~Ii 183 (282)
T 1aj0_A 113 IINDIRSLSE---------PGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLL 183 (282)
T ss_dssp EEEETTTTCS---------TTHHHHHHHHTCCEEEECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred EEEECCCCCC---------HHHHHHHHHhCCeEEEEccCCCCccccccCccchHHHHHHHHHHHHHHHHHHcCCChhhEE
Confidence 222111 112 23456677889999999973 0 1123456677788975 66
Q ss_pred Eec
Q 014320 312 GEP 314 (427)
Q Consensus 312 ~~~ 314 (427)
.++
T Consensus 184 lDP 186 (282)
T 1aj0_A 184 LDP 186 (282)
T ss_dssp EEC
T ss_pred EeC
Confidence 543
No 115
>1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A*
Probab=79.78 E-value=5.7 Score=37.29 Aligned_cols=112 Identities=9% Similarity=0.160 Sum_probs=60.7
Q ss_pred cCCCEEEEcCCC---------HHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCC-cccHHH
Q 014320 282 VNTPLYVVHVMS---------MDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRA-SGHNKA 351 (427)
Q Consensus 282 ~g~~~~i~H~~~---------~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~-~~~~~~ 351 (427)
...|+.++|... .. -+.++.+++.|--|-...+|.++--.. .+.+.. ..+.+.
T Consensus 211 s~~PviaSHSn~ral~~h~RNl~-De~l~~la~~GGvigv~~~~~fl~~~~----------------~~t~~~~~~hi~h 273 (369)
T 1itu_A 211 SRAPVIFSHSSAYSVCASRRNVP-DDVLRLVKQTDSLVMVNFYNNYISCTN----------------KANLSQVADHLDH 273 (369)
T ss_dssp CSSCCEESSCCBTTTSCCTTSBC-HHHHHHHHHHTCEEEECCCHHHHTSSS----------------CCBHHHHHHHHHH
T ss_pred cCCCEEEeCCChhhcCCCCCCCC-HHHHHHHHHcCCeEEEEechhhcCCCC----------------CCCHHHHHHHHHH
Confidence 345777888753 12 367888888886566655554431100 000000 001122
Q ss_pred HHHHHhcCC-ceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 352 LQAALATGI-LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 352 l~~~l~~G~-~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+.+. -|+ .+.||||.... ...|.|+.... .+|.+...+.+ .++|-+++-+++..|.-|+
T Consensus 274 i~~~--~G~dhVgiGsDfdG~------------~~~p~gl~d~~-~~p~l~~~L~~-~G~se~~i~ki~g~N~lRv 333 (369)
T 1itu_A 274 IKEV--AGARAVGFGGDFDGV------------PRVPEGLEDVS-KYPDLIAELLR-RNWTEAEVKGALADNLLRV 333 (369)
T ss_dssp HHHH--HCGGGEEECCCTTSC------------SCCCBTCSSTT-CHHHHHHHHHH-TTCCHHHHHHHHTHHHHHH
T ss_pred HHHh--hCCCeEEECCCCCCC------------CCCCCCCCCHH-HHHHHHHHHHH-cCCCHHHHHHHHhHhHHHH
Confidence 2222 254 48999996321 11233444333 55666645544 5699999999999998663
No 116
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=79.14 E-value=27 Score=31.32 Aligned_cols=119 Identities=15% Similarity=0.104 Sum_probs=67.2
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecC--C-CccCCHHHHHHHHHHHHHc---CCcEEEecCChhhHHHHHHHHHHcCCCC
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYK--G-SFMINDELLIEGFKRCKSL---GALAMVHAENGDAVFEGQKRMIELGITG 255 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~--~-~~~~~~~~l~~~~~~a~~~---g~~v~~H~e~~~~~~~~~~~l~~~G~~~ 255 (427)
+..++..++++ +.|++.|.+..... + .+...++++++++...+.. ++++++.....+.++.++ +.|..-
T Consensus 29 ~~a~~~a~~~v-~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~~~piSIDT~~~~va~aAl----~aGa~i 103 (280)
T 1eye_A 29 DDAVKHGLAMA-AAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGITVSIDTMRADVARAAL----QNGAQM 103 (280)
T ss_dssp HHHHHHHHHHH-HTTCSEEEEECC--------------HHHHHHHHHHHHHTTCCEEEECSCHHHHHHHH----HTTCCE
T ss_pred HHHHHHHHHHH-HCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEeCCCHHHHHHHH----HcCCCE
Confidence 44566667777 79999998876332 1 1223456676665555443 999999988887665443 345422
Q ss_pred ccccc--ccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCC-------------------H-HHHHHHHHHhhcCCC---E
Q 014320 256 PEGHA--LSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS-------------------M-DAMEEIAKARKAGQR---V 310 (427)
Q Consensus 256 ~~~~~--~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~-------------------~-~~~~~i~~~~~~G~~---v 310 (427)
..... ...| +.+.+++++++++.+.|... . .-.+.++.+.+.|++ +
T Consensus 104 INdvsg~~~d~---------~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~~v~~~l~~~i~~a~~~Gi~~~~I 174 (280)
T 1eye_A 104 VNDVSGGRADP---------AMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVAAGVDPARL 174 (280)
T ss_dssp EEETTTTSSCT---------THHHHHHHHTCCEEEECCCCSCTTCTTSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGE
T ss_pred EEECCCCCCCH---------HHHHHHHHhCCeEEEEcCCCCCcchhhcCcchhHHHHHHHHHHHHHHHHHHHcCCChhhE
Confidence 21111 1122 34566778899999999720 1 112456677888975 5
Q ss_pred EEec
Q 014320 311 IGEP 314 (427)
Q Consensus 311 ~~~~ 314 (427)
..++
T Consensus 175 ilDP 178 (280)
T 1eye_A 175 VLDP 178 (280)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 5544
No 117
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=76.41 E-value=25 Score=30.69 Aligned_cols=18 Identities=17% Similarity=0.196 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHcCCcEE
Q 014320 215 ELLIEGFKRCKSLGALAM 232 (427)
Q Consensus 215 ~~l~~~~~~a~~~g~~v~ 232 (427)
+.+++.++.|++.|.+..
T Consensus 85 ~~~~~~i~~a~~lG~~~v 102 (272)
T 2q02_A 85 KKTEGLLRDAQGVGARAL 102 (272)
T ss_dssp HHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHhCCCEE
Confidence 345666666666666543
No 118
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=75.88 E-value=45 Score=30.07 Aligned_cols=120 Identities=14% Similarity=0.161 Sum_probs=70.2
Q ss_pred hhHHHHHHHHHHcCCCeEEEEEec--CCCccC-CHHHHHHHH---HHHHH-cCCcEEEecCChhhHHHHHHHHHHcCCCC
Q 014320 183 VVSDEMEVMVKEKGINSFKFFMAY--KGSFMI-NDELLIEGF---KRCKS-LGALAMVHAENGDAVFEGQKRMIELGITG 255 (427)
Q Consensus 183 ~~~~~~~~l~~~~g~~~ik~~~~~--~~~~~~-~~~~l~~~~---~~a~~-~g~~v~~H~e~~~~~~~~~~~l~~~G~~~ 255 (427)
...+..++++ +.|++.|.+.... .+.... .+|++++++ +..++ .++++.+...+.+.++.+.+ .|..-
T Consensus 64 ~a~~~a~~~v-~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~vpiSIDT~~~~V~~aAl~----aGa~i 138 (297)
T 1tx2_A 64 AAVRHAKEMR-DEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKLPISIDTYKAEVAKQAIE----AGAHI 138 (297)
T ss_dssp HHHHHHHHHH-HTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCSCEEEECSCHHHHHHHHH----HTCCE
T ss_pred HHHHHHHHHH-HcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCceEEEeCCCHHHHHHHHH----cCCCE
Confidence 3445556666 7899999887643 222223 366776665 55554 49999999888776655543 35432
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCC------------HHHHHHHHHHhhcCCC---EEEec
Q 014320 256 PEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS------------MDAMEEIAKARKAGQR---VIGEP 314 (427)
Q Consensus 256 ~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~------------~~~~~~i~~~~~~G~~---v~~~~ 314 (427)
........ ...+.+.+++++++++.+.|... ..-.+.++.+.+.|++ +..++
T Consensus 139 INdvsg~~-------~d~~m~~~aa~~g~~vVlmh~~G~p~y~d~v~ev~~~l~~~i~~a~~~GI~~~~IilDP 205 (297)
T 1tx2_A 139 INDIWGAK-------AEPKIAEVAAHYDVPIILMHNRDNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDP 205 (297)
T ss_dssp EEETTTTS-------SCTHHHHHHHHHTCCEEEECCCSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred EEECCCCC-------CCHHHHHHHHHhCCcEEEEeCCCCCCcchHHHHHHHHHHHHHHHHHHcCCChhcEEEeC
Confidence 21111100 01234566778899999999631 1123456777888975 66554
No 119
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=74.83 E-value=30 Score=33.51 Aligned_cols=107 Identities=12% Similarity=0.096 Sum_probs=60.2
Q ss_pred HHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhccccceeceeccccCCChhhH-HHHHHHHHHcCCCeEEEEEec
Q 014320 129 SGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVS-DEMEVMVKEKGINSFKFFMAY 206 (427)
Q Consensus 129 ~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~g~~~ik~~~~~ 206 (427)
...+.++.+|+..++-+...... .....++..++.+......+.+..+.. .+.+.. +.++++. +.|++.|.+. +.
T Consensus 104 ~~v~~a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~-~~~e~~~~~a~~l~-~~Gad~I~l~-DT 180 (464)
T 2nx9_A 104 TFVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSPV-HNLQTWVDVAQQLA-ELGVDSIALK-DM 180 (464)
T ss_dssp HHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCCTT-CCHHHHHHHHHHHH-HTTCSEEEEE-ET
T ss_pred HHHHHHHhCCcCEEEEEEecCHHHHHHHHHHHHHHCCCEEEEEEEeeeCCC-CCHHHHHHHHHHHH-HCCCCEEEEc-CC
Confidence 34567888999887754322222 344555555555543333332222222 233333 3344444 7899876543 22
Q ss_pred CCCccCCHHHHHHHHHHHHH-cCCcEEEecCChhh
Q 014320 207 KGSFMINDELLIEGFKRCKS-LGALAMVHAENGDA 240 (427)
Q Consensus 207 ~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~e~~~~ 240 (427)
.| ...+..+.++++..++ .++++.+|+.++..
T Consensus 181 ~G--~~~P~~v~~lv~~l~~~~~~~i~~H~Hnd~G 213 (464)
T 2nx9_A 181 AG--ILTPYAAEELVSTLKKQVDVELHLHCHSTAG 213 (464)
T ss_dssp TS--CCCHHHHHHHHHHHHHHCCSCEEEEECCTTS
T ss_pred CC--CcCHHHHHHHHHHHHHhcCCeEEEEECCCCC
Confidence 22 2568888888777654 58899999876653
No 120
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=73.39 E-value=41 Score=31.14 Aligned_cols=33 Identities=18% Similarity=0.072 Sum_probs=28.5
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEecCChhhHHHH
Q 014320 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEG 244 (427)
Q Consensus 212 ~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~ 244 (427)
++.+.++.+.+.+++.|+++..-+-+.+.++..
T Consensus 88 l~~e~~~~L~~~~~~~Gi~~~st~~d~~svd~l 120 (349)
T 2wqp_A 88 LNEEDEIKLKEYVESKGMIFISTLFSRAAALRL 120 (349)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCeEEEeeCCHHHHHHH
Confidence 578999999999999999999998888777443
No 121
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=73.07 E-value=49 Score=29.16 Aligned_cols=39 Identities=10% Similarity=0.071 Sum_probs=31.3
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEe
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH 234 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H 234 (427)
+.|.+.+.++.... ...+++.+.++.+.++++|+.+..+
T Consensus 32 ~~G~~~vEl~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~ 70 (290)
T 3tva_A 32 DLKVPTVQVHAPHP--HTRTREHAQAFRAKCDAAGIQVTVI 70 (290)
T ss_dssp HTTCSEEEEECCCG--GGCSHHHHHHHHHHHHHTTCEEEEE
T ss_pred HcCCCEEEecCCCC--CcCCHHHHHHHHHHHHHcCCEEEEE
Confidence 78999998876322 2357888999999999999999887
No 122
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=72.66 E-value=7.2 Score=34.21 Aligned_cols=37 Identities=22% Similarity=0.184 Sum_probs=24.1
Q ss_pred cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEE
Q 014320 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMV 233 (427)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~ 233 (427)
.-++.+|+.. ......+.+.+++.++.++++|+.+..
T Consensus 37 ~yID~lKfg~--Gt~~l~~~~~l~eki~l~~~~gV~v~~ 73 (251)
T 1qwg_A 37 DYIDFVKFGW--GTSAVIDRDVVKEKINYYKDWGIKVYP 73 (251)
T ss_dssp GGCSEEEECT--TGGGGSCHHHHHHHHHHHHTTTCEEEE
T ss_pred hhcceEEecC--ceeeecCHHHHHHHHHHHHHcCCeEEC
Confidence 4466777632 223345677788888888888877655
No 123
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=71.95 E-value=28 Score=31.47 Aligned_cols=97 Identities=16% Similarity=0.062 Sum_probs=59.6
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc----CCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc--cCCH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL----GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPP 265 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~----g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~--~~p~ 265 (427)
+.|++++-+.-+....+.++.++-+++++.+.+. .++|.+++. +..+..+..+++++.|....-..+. ..|+
T Consensus 39 ~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s 118 (301)
T 3m5v_A 39 ENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAPYYNKPT 118 (301)
T ss_dssp HTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCC
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCC
Confidence 6899888554443444677888888888777654 589999963 3444444456778888754432221 2444
Q ss_pred HHHHHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 266 LLEGEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 266 ~~e~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
..+. +.-...++...+.++.+-+..
T Consensus 119 ~~~l--~~~f~~va~a~~lPiilYn~P 143 (301)
T 3m5v_A 119 QQGL--YEHYKAIAQSVDIPVLLYNVP 143 (301)
T ss_dssp HHHH--HHHHHHHHHHCSSCEEEEECH
T ss_pred HHHH--HHHHHHHHHhCCCCEEEEeCc
Confidence 4332 333344555568888888864
No 124
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=71.43 E-value=14 Score=33.78 Aligned_cols=43 Identities=12% Similarity=0.136 Sum_probs=31.6
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE 236 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e 236 (427)
+.|++++-+.-+....+.++.++-+++++.+.+. .++|.+++.
T Consensus 40 ~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg 85 (309)
T 3fkr_A 40 DAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTS 85 (309)
T ss_dssp HTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC
T ss_pred HcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecC
Confidence 6899988665444455678888888888877653 578999964
No 125
>3ly0_A Dipeptidase AC. metallo peptidase. merops family M19; structural genomics, nysgrc, target 9523C, phosphinate inhibitor, PSI-2; HET: LY0; 1.40A {Rhodobacter sphaeroides} PDB: 3fdg_A
Probab=71.18 E-value=18 Score=33.69 Aligned_cols=114 Identities=18% Similarity=0.139 Sum_probs=62.0
Q ss_pred cCCCEEEEcCCC---------HHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCC-cccHHH
Q 014320 282 VNTPLYVVHVMS---------MDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRA-SGHNKA 351 (427)
Q Consensus 282 ~g~~~~i~H~~~---------~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~-~~~~~~ 351 (427)
...|+.++|.+. .. -++++.++++|--|-...+|.++- .+.... ..+.+.. ..+.+.
T Consensus 225 s~~PviaSHSnaral~~h~RNl~-De~l~ala~~GGvigv~f~~~fl~--~~~~~~----------~~~tl~~~~~Hi~h 291 (364)
T 3ly0_A 225 SDAPLVATHSNAHAVTPSTRNLT-DRQLAMIRESRGMVGLNFATSFLR--EDGRRS----------AEMGWEPVLRHLDH 291 (364)
T ss_dssp CSSCCEETTCCBTTTSCCTTSBC-HHHHHHHHHTTCEEEECCCHHHHS--TTCCCC----------SCCCSHHHHHHHHH
T ss_pred cCCCeEEeCCchhhcCCCCCCCC-HHHHHHHHHcCcEEEEeccHhhhc--CCCCCC----------CCCCHHHHHHHHHH
Confidence 446777888653 22 377888888886666655665442 110000 0011111 001222
Q ss_pred HHHHHhcCC-ceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhc
Q 014320 352 LQAALATGI-LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGR 425 (427)
Q Consensus 352 l~~~l~~G~-~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~ 425 (427)
+.+.. |+ .+.||||..... .|.|+.... .+|.+...+.+ .++|-+++-+++-.|.-|
T Consensus 292 i~~l~--G~dhVgiGsDfdG~~-------------~p~gl~d~s-~~p~L~~~L~~-rG~se~~i~ki~g~N~lR 349 (364)
T 3ly0_A 292 LIDRL--GEDHVGMGSDFDGAT-------------IPQGIADVT-GLPALQAAMRA-HGYDEPLMRKLCHENWYG 349 (364)
T ss_dssp HHHHH--CTTSEEECCCBTTSC-------------CCTTTCSGG-GHHHHHHHHHH-HTCCHHHHHHHHTHHHHH
T ss_pred HHHhc--CCCeEEECCCCCCCC-------------CCCCCCCHH-HHHHHHHHHHH-CCCCHHHHHHHHhHhHHH
Confidence 33322 54 599999963211 233444333 45666655544 469999999999988755
No 126
>3b40_A PVDM, probable dipeptidase; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=70.99 E-value=17 Score=34.72 Aligned_cols=52 Identities=17% Similarity=0.156 Sum_probs=32.9
Q ss_pred CC-ceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhc
Q 014320 359 GI-LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGR 425 (427)
Q Consensus 359 G~-~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~ 425 (427)
|+ .+.||||..... .+.|+.... .+|.+...+.+ .++|-+++-+++..|.-|
T Consensus 350 G~dhVGiGsDfDG~~-------------~~~gl~dvs-~~p~l~~~L~~-rG~se~di~ki~ggN~lR 402 (417)
T 3b40_A 350 GIDHVGISSDFNDGG-------------GVDGWKDVS-EIRNVTAELIT-RGYSDADIAKLWGGNFLR 402 (417)
T ss_dssp CGGGEEEECCBTTTC-------------CBBTBCSGG-GHHHHHHHHHH-HTCCHHHHHHHTTHHHHH
T ss_pred CCCeEEEcCCCCCCC-------------CCCCCCCHH-HHHHHHHHHHh-cCCCHHHHHHHHHHHHHH
Confidence 43 589999963211 012443333 55666655554 469999999999988765
No 127
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=70.72 E-value=21 Score=32.78 Aligned_cols=38 Identities=13% Similarity=0.328 Sum_probs=26.6
Q ss_pred CCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 387 PNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 387 ~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
+.|+.... .+|.+...+. +.++|-+++-+++..|..|+
T Consensus 281 ~~gl~~~~-~~~~l~~~L~-~~G~se~~i~ki~g~N~lRv 318 (325)
T 2i5g_A 281 PLGIRTVG-EFPNLTETLL-KRGMPERVVRKVMGENWVRV 318 (325)
T ss_dssp CBTCSSGG-GTHHHHHHHH-HTTCCHHHHHHHHTHHHHHH
T ss_pred cccCCCHH-HHHHHHHHHH-HcCCCHHHHHHHHHHHHHHH
Confidence 44555554 5566664554 45699999999999998764
No 128
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=69.83 E-value=19 Score=32.57 Aligned_cols=43 Identities=7% Similarity=-0.017 Sum_probs=31.1
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE 236 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e 236 (427)
+.|++++-+.-+....+.++.++-+++++.+.+. .++|.+++.
T Consensus 35 ~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg 80 (294)
T 3b4u_A 35 SNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVL 80 (294)
T ss_dssp HTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC
Confidence 6899988654444445678999988888887764 367888863
No 129
>3id7_A Dipeptidase; streptomyces coelicolor A3(2), hydrolase; 1.30A {Streptomyces coelicolor} PDB: 3isi_X* 3itc_A* 3k5x_A* 3s2j_A* 3s2l_A* 3s2m_A* 3s2n_A*
Probab=69.01 E-value=12 Score=35.55 Aligned_cols=53 Identities=19% Similarity=0.220 Sum_probs=33.6
Q ss_pred CC-ceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhc
Q 014320 359 GI-LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGR 425 (427)
Q Consensus 359 G~-~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~ 425 (427)
|+ .+.||||.... ...|.|+.... .+|.+...+.+ .++|-+++-+++..|.-|
T Consensus 311 G~dhVgiGsDfDG~------------~~~P~gl~dvs-~~p~L~~~L~~-rG~se~di~ki~g~N~lR 364 (400)
T 3id7_A 311 GVDHLGIGGDYDGT------------PFTPDGLGDVS-GYPNLIAELLD-RGWSQSDLAKLTWKNAVR 364 (400)
T ss_dssp CGGGEEECCCBTTC------------SCCCBTCSSTT-CHHHHHHHHHH-TTCCHHHHHHHHTHHHHH
T ss_pred CCceEEECCCCCCC------------CCCCCCCCCHH-HHHHHHHHHhh-cCCCHHHHHHHHHHhHHH
Confidence 54 58999996432 11233443332 45666555544 469999999999988755
No 130
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=68.92 E-value=46 Score=29.86 Aligned_cols=50 Identities=18% Similarity=0.227 Sum_probs=35.1
Q ss_pred HHHHHHHHHHcCCCeEEEEEe-----cCCCccCCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 185 SDEMEVMVKEKGINSFKFFMA-----YKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 185 ~~~~~~l~~~~g~~~ik~~~~-----~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
.++..+.+++-|++.+-+.++ |.+.+.++.+.|+++-+.. ++|+..|-.+
T Consensus 161 Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v---~vpLVlHGgS 215 (288)
T 3q94_A 161 PAECKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFT---GVPLVLHGGT 215 (288)
T ss_dssp HHHHHHHHHHHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHH---CSCEEECCCT
T ss_pred HHHHHHHHHHHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhc---CCCEEEeCCC
Confidence 456677776789998876554 2334567888888876654 7999999533
No 131
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=68.60 E-value=16 Score=32.90 Aligned_cols=44 Identities=5% Similarity=-0.081 Sum_probs=30.7
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecCC
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAEN 237 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e~ 237 (427)
+.|++++-+.-+....+.++.++-+++++.+.+. .++|.+++..
T Consensus 33 ~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~ 79 (291)
T 3a5f_A 33 KSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGS 79 (291)
T ss_dssp HTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCc
Confidence 6899987654444445678888888887776552 4788888743
No 132
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=68.05 E-value=52 Score=29.61 Aligned_cols=97 Identities=11% Similarity=0.005 Sum_probs=59.9
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc--cCCHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~--~~p~~ 266 (427)
+.|++++-+.-+....+.++.++-+++++.+.+. .++|.+|+. +..+..+..+++++.|....-..+. ..|+.
T Consensus 39 ~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~ 118 (297)
T 3flu_A 39 ENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQ 118 (297)
T ss_dssp HTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCH
T ss_pred HcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCH
Confidence 6899988655444445677888888888777553 478999963 3444444456778888754432221 24444
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 267 LEGEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 267 ~e~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
.+. +.-...++...+.++.+-|..
T Consensus 119 ~~l--~~~f~~va~a~~lPiilYn~P 142 (297)
T 3flu_A 119 EGI--YQHFKTIAEATSIPMIIYNVP 142 (297)
T ss_dssp HHH--HHHHHHHHHHCCSCEEEEECH
T ss_pred HHH--HHHHHHHHHhCCCCEEEEECC
Confidence 332 333344555568888888864
No 133
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=67.65 E-value=4.6 Score=38.06 Aligned_cols=55 Identities=13% Similarity=0.203 Sum_probs=42.5
Q ss_pred hhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCCh
Q 014320 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (427)
Q Consensus 183 ~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~ 238 (427)
...+++++.++..|+.++++.....+ ...+++.+..+.+.+.++|++|.+|....
T Consensus 160 ~a~~EL~r~~~~~G~~Gv~l~~~~~g-~~l~d~~~~pi~~~~~e~g~pV~iH~g~~ 214 (373)
T 4inf_A 160 WSAREIHRGARELGFKGIQINSHTQG-RYLDEEFFDPIFRALVEVDQPLYIHPATS 214 (373)
T ss_dssp HHHHHHHHHHHTSCCCCEEECSCBTT-BCTTSGGGHHHHHHHHHHTCCEEECCCCC
T ss_pred HHHHHHHHHHhhcCceEEEECCCCCC-CCCCCcchHHHHHHHHHcCCeEEECCCCC
Confidence 45678888884459999997654433 34577889999999999999999998543
No 134
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=67.57 E-value=37 Score=30.77 Aligned_cols=97 Identities=15% Similarity=0.100 Sum_probs=59.2
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc--cCCHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~--~~p~~ 266 (427)
+.|++++-+.-+....+.++.++-+++++.+.+. .++|.+++. +..+..+..+++++.|....-..+. ..|+.
T Consensus 47 ~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~ 126 (304)
T 3l21_A 47 DQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPYYSKPPQ 126 (304)
T ss_dssp HTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCH
T ss_pred HcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCH
Confidence 6899988554444445677888888888877653 578999963 3344444456777888754432211 23433
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 267 LEGEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 267 ~e~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
.+ -+.-..+++...+.++.+-|..
T Consensus 127 ~~--l~~~f~~va~a~~lPiilYn~P 150 (304)
T 3l21_A 127 RG--LQAHFTAVADATELPMLLYDIP 150 (304)
T ss_dssp HH--HHHHHHHHHTSCSSCEEEEECH
T ss_pred HH--HHHHHHHHHHhcCCCEEEEeCc
Confidence 22 2333344555568888888764
No 135
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=67.14 E-value=64 Score=32.09 Aligned_cols=122 Identities=15% Similarity=0.053 Sum_probs=76.3
Q ss_pred hhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc-CCcEEEecCChhhHHHHHHHHHHcCCCCcccccc
Q 014320 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHAENGDAVFEGQKRMIELGITGPEGHAL 261 (427)
Q Consensus 183 ~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~ 261 (427)
..++..++++ +.|++.|.+.. .......++++++++...++. ++++++=..+.+.++...+.+. |..-....
T Consensus 341 ~a~~~A~~~v-~~GAdiIDIgp--g~~~v~~~ee~~rvv~~i~~~~~vpisIDT~~~~v~eaal~~~~--G~~iINdi-- 413 (566)
T 1q7z_A 341 IVIKEAKTQV-EKGAEVLDVNF--GIESQIDVRYVEKIVQTLPYVSNVPLSLDIQNVDLTERALRAYP--GRSLFNSA-- 413 (566)
T ss_dssp HHHHHHHHHH-HTTCSEEEEEC--SSGGGSCHHHHHHHHHHHHHHTCSCEEEECCCHHHHHHHHHHCS--SCCEEEEE--
T ss_pred HHHHHHHHHH-HCCCCEEEECC--CCCCCCHHHHHHHHHHHHHhhCCceEEEeCCCHHHHHHHHHhcC--CCCEEEEC--
Confidence 3444455566 79999998863 223345688899888877654 8999998877776665554331 43211110
Q ss_pred cCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCC----------HHHHHHHHHHhhcCCC--EEEecC
Q 014320 262 SRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS----------MDAMEEIAKARKAGQR--VIGEPV 315 (427)
Q Consensus 262 ~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~----------~~~~~~i~~~~~~G~~--v~~~~~ 315 (427)
+. +.+...+.+.+++++|+++.+.|... ..-.+.++.+.+.|++ +..++.
T Consensus 414 s~----~~~~~~~~~~~~~~~g~~vV~m~~~~~~p~t~~~~~~~l~~~~~~a~~~Gi~~~IilDPg 475 (566)
T 1q7z_A 414 KV----DEEELEMKINLLKKYGGTLIVLLMGKDVPKSFEERKEYFEKALKILERHDFSDRVIFDPG 475 (566)
T ss_dssp ES----CHHHHHHHHHHHHHHCCEEEEESCSSSCCCSHHHHHHHHHHHHHHHHHTTCGGGEEEECC
T ss_pred Cc----chhhHHHHHHHHHHhCCeEEEEeCCCCCcCCHHHHHHHHHHHHHHHHHCCCCCcEEEeCC
Confidence 00 11333566778889999999999763 1123456677888984 665544
No 136
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=66.34 E-value=16 Score=32.91 Aligned_cols=44 Identities=9% Similarity=-0.024 Sum_probs=30.6
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecCC
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAEN 237 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e~ 237 (427)
+.|++++-+.-+....+.++.++-+++++.+.+. .++|.+++..
T Consensus 33 ~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~ 79 (292)
T 2ojp_A 33 ASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGA 79 (292)
T ss_dssp HHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC
T ss_pred HcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC
Confidence 6799987654444445678888888887776553 4788888743
No 137
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=65.34 E-value=21 Score=32.50 Aligned_cols=43 Identities=9% Similarity=0.017 Sum_probs=31.7
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE 236 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e 236 (427)
+.|++++-+.-+....+.++.++-+++++.+.+. .++|.+++.
T Consensus 46 ~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg 91 (307)
T 3s5o_A 46 TFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSG 91 (307)
T ss_dssp TSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECC
T ss_pred HcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecC
Confidence 5788888655444445678999988888888764 578888863
No 138
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=65.28 E-value=47 Score=29.79 Aligned_cols=97 Identities=10% Similarity=-0.010 Sum_probs=58.8
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc--cCCHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~--~~p~~ 266 (427)
+.|++++-+.-+....+.++.++-+++++.+.+. .++|.+++. +..+..+..+++++.|....-..+. ..|+.
T Consensus 34 ~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~ 113 (292)
T 3daq_A 34 ENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNKTNQ 113 (292)
T ss_dssp HTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCH
T ss_pred HcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCCCCCCCH
Confidence 6899988655444445677888888877776553 578999963 3444444456777888754432221 23444
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 267 LEGEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 267 ~e~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
.+.. .-...++...+.++.+-|..
T Consensus 114 ~~l~--~~f~~ia~a~~lPiilYn~P 137 (292)
T 3daq_A 114 RGLV--KHFEAIADAVKLPVVLYNVP 137 (292)
T ss_dssp HHHH--HHHHHHHHHHCSCEEEEECH
T ss_pred HHHH--HHHHHHHHhCCCCEEEEecc
Confidence 3333 23333444558888888864
No 139
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=65.06 E-value=38 Score=29.79 Aligned_cols=52 Identities=10% Similarity=-0.064 Sum_probs=26.8
Q ss_pred hhHHHHHHHHHHcCCCeEEEEEecCCCcc-C----CHHHHHHHHHHHHHcCCcEE-Eec
Q 014320 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFM-I----NDELLIEGFKRCKSLGALAM-VHA 235 (427)
Q Consensus 183 ~~~~~~~~l~~~~g~~~ik~~~~~~~~~~-~----~~~~l~~~~~~a~~~g~~v~-~H~ 235 (427)
...+++++++++.|.....+. .+...+. - ..+.+++.++.|++.|.+.. +|+
T Consensus 48 ~~~~~~~~~l~~~gl~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~ 105 (286)
T 3dx5_A 48 ETTERELNCLKDKTLEITMIS-DYLDISLSADFEKTIEKCEQLAILANWFKTNKIRTFA 105 (286)
T ss_dssp HHHHHHHHHTGGGTCCEEEEE-CCCCCSTTSCHHHHHHHHHHHHHHHHHHTCCEEEECS
T ss_pred HHHHHHHHHHHHcCCeEEEEe-cCCCCCCchhHHHHHHHHHHHHHHHHHhCCCEEEEcC
Confidence 445556666555666543321 1111010 0 12466777888888887655 565
No 140
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=64.43 E-value=60 Score=29.05 Aligned_cols=97 Identities=18% Similarity=0.080 Sum_probs=59.0
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc--cCCHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~--~~p~~ 266 (427)
+.|++++-+.-+....+.++.++-+++++.+.+. .++|.+++. +..+..+..+++++.|....-..+. ..|+.
T Consensus 33 ~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~ 112 (291)
T 3tak_A 33 EQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPYYNKPTQ 112 (291)
T ss_dssp HHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCH
T ss_pred HCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCH
Confidence 6899988554443444667888888888777553 478999963 3444444456777888754432211 24444
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 267 LEGEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 267 ~e~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
.+. +.-...++...+.++.+-|..
T Consensus 113 ~~l--~~~f~~ia~a~~lPiilYn~P 136 (291)
T 3tak_A 113 EGL--YQHYKAIAEAVELPLILYNVP 136 (291)
T ss_dssp HHH--HHHHHHHHHHCCSCEEEEECH
T ss_pred HHH--HHHHHHHHHhcCCCEEEEecc
Confidence 332 333334455568888888864
No 141
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=63.89 E-value=56 Score=29.70 Aligned_cols=97 Identities=13% Similarity=0.020 Sum_probs=58.6
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc--cCCHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~--~~p~~ 266 (427)
+.|++++-+.-+....+.++.++-+++++.+.+. .++|.+++. +..+..+..+++++.|....-..+. ..|+.
T Consensus 55 ~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~s~ 134 (314)
T 3qze_A 55 QEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNKPTQ 134 (314)
T ss_dssp HHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCH
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCH
Confidence 6799888554444445677888888877766543 478888863 3444444456777888754432211 24444
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 267 LEGEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 267 ~e~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
.+. +.-...++...+.++.+-+..
T Consensus 135 ~~l--~~~f~~va~a~~lPiilYn~P 158 (314)
T 3qze_A 135 EGM--YQHFRHIAEAVAIPQILYNVP 158 (314)
T ss_dssp HHH--HHHHHHHHHHSCSCEEEEECH
T ss_pred HHH--HHHHHHHHHhcCCCEEEEeCc
Confidence 332 333334455568898888864
No 142
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=63.68 E-value=63 Score=28.95 Aligned_cols=49 Identities=16% Similarity=0.173 Sum_probs=34.6
Q ss_pred HHHHHHHHHHcCCCeEEEEEec-C----CCccCCHHHHHHHHHHHHHcCCcEEEecC
Q 014320 185 SDEMEVMVKEKGINSFKFFMAY-K----GSFMINDELLIEGFKRCKSLGALAMVHAE 236 (427)
Q Consensus 185 ~~~~~~l~~~~g~~~ik~~~~~-~----~~~~~~~~~l~~~~~~a~~~g~~v~~H~e 236 (427)
.++..+.+++-|++.+-+.++. | +.+.++.+.|+++-+. .++|+..|-.
T Consensus 157 Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~---~~vpLVlHGg 210 (286)
T 1gvf_A 157 PQEAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREV---VDVPLVLHGA 210 (286)
T ss_dssp HHHHHHHHHHHCCSEEEECSSCCSSCCSSCCCCCHHHHHHHHHH---CCSCEEECCC
T ss_pred HHHHHHHHHHHCCCEEEeecCccccCcCCCCccCHHHHHHHHHh---cCCCEEEECC
Confidence 4566777767899987665542 3 3456788888877654 5899999953
No 143
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=63.54 E-value=24 Score=32.84 Aligned_cols=43 Identities=5% Similarity=-0.108 Sum_probs=30.1
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE 236 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e 236 (427)
+.|++++-+.-+....+.++.++-+++++.+.+. .++|.+++.
T Consensus 91 ~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg 136 (360)
T 4dpp_A 91 QNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTG 136 (360)
T ss_dssp HTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC
T ss_pred HcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecC
Confidence 6899988664444445677888888877766543 478888864
No 144
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=62.73 E-value=49 Score=30.12 Aligned_cols=108 Identities=10% Similarity=0.025 Sum_probs=63.4
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc--cCCHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~--~~p~~ 266 (427)
+.|++++-+.-+....+.++.++-+++++.+.+. .++|.+++. +..+..+..+++++.|....-..+. ..|+.
T Consensus 56 ~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~ 135 (315)
T 3na8_A 56 DGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPISYWKLNE 135 (315)
T ss_dssp HTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCCCH
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCH
Confidence 6889887554444445677888888887777553 478888863 3344444456777888754432221 23443
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEcCCCHH----HHHHHHHH
Q 014320 267 LEGEATTRAIRLAEFVNTPLYVVHVMSMD----AMEEIAKA 303 (427)
Q Consensus 267 ~e~~a~~~~~~~~~~~g~~~~i~H~~~~~----~~~~i~~~ 303 (427)
.+. +.-...++...+.++.+-+..... +.+.+.++
T Consensus 136 ~~l--~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 174 (315)
T 3na8_A 136 AEV--FQHYRAVGEAIGVPVMLYNNPGTSGIDMSVELILRI 174 (315)
T ss_dssp HHH--HHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred HHH--HHHHHHHHHhCCCcEEEEeCcchhCcCCCHHHHHHH
Confidence 332 333334455568898888864321 13555555
No 145
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=62.47 E-value=51 Score=29.98 Aligned_cols=97 Identities=15% Similarity=0.082 Sum_probs=58.6
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc--cCCHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~--~~p~~ 266 (427)
+.|++++-+.-+....+.++.++-+++++.+.+. .++|.+++. +..+..+..+++++.|..+.-..+. ..|+.
T Consensus 54 ~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~ 133 (315)
T 3si9_A 54 TQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQ 133 (315)
T ss_dssp HTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCH
T ss_pred HcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCH
Confidence 6888888554443445667888888887776553 578888863 3444444456777888754432211 24444
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 267 LEGEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 267 ~e~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
.+. +.-...++...+.++.+-+..
T Consensus 134 ~~l--~~~f~~va~a~~lPiilYn~P 157 (315)
T 3si9_A 134 RGL--YTHFSSIAKAISIPIIIYNIP 157 (315)
T ss_dssp HHH--HHHHHHHHHHCSSCEEEEECH
T ss_pred HHH--HHHHHHHHHcCCCCEEEEeCc
Confidence 333 333334455568888888864
No 146
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=61.88 E-value=83 Score=27.60 Aligned_cols=118 Identities=8% Similarity=-0.101 Sum_probs=59.8
Q ss_pred HHHHHcCCceEEecC---cCCCCCcHHHHHHHHHHHhccccceec--eeccccCCChhhHHHH----HHHHHHcCCCeEE
Q 014320 131 QAAALAGGTTMHIDF---VIPINGSLTAGFEAYEKKAKNSCMDYG--FHMAITKWDEVVSDEM----EVMVKEKGINSFK 201 (427)
Q Consensus 131 ~~~~l~~GvTtv~d~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~----~~l~~~~g~~~ik 201 (427)
+..|.++|-.-+-=. ...+.++....++..++.. ..++..- ..++....+++.++.| +.+. +.|++++-
T Consensus 14 a~~A~~~GAdRIELc~~L~~GGlTPS~g~i~~~~~~~-~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~-~~GadGvV 91 (256)
T 1twd_A 14 ALTAQQNGADRVELCAAPKEGGLTPSLGVLKSVRQRV-TIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVR-ELGFPGLV 91 (256)
T ss_dssp HHHHHHTTCSEEEECBCGGGTCBCCCHHHHHHHHHHC-CSCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHH-HTTCSEEE
T ss_pred HHHHHHcCCCEEEEcCCcccCCCCCCHHHHHHHHHHc-CCceEEEECCCCCCCcCCHHHHHHHHHHHHHHH-HcCCCEEE
Confidence 566777887766421 1111122344444443332 2222221 1122112233333333 3333 78999885
Q ss_pred EEEecCCCccCCHHHHHHHHHHHHHcCCcEEEe-cCCh-hhHHHHHHHHHHcCC
Q 014320 202 FFMAYKGSFMINDELLIEGFKRCKSLGALAMVH-AENG-DAVFEGQKRMIELGI 253 (427)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H-~e~~-~~~~~~~~~l~~~G~ 253 (427)
+..- .....++.+.++++++.|+ +++++.| +-+. ......++.+.++|+
T Consensus 92 ~G~L-t~dg~iD~~~~~~Li~~a~--~~~vTFHRAfD~~~d~~~ale~L~~lG~ 142 (256)
T 1twd_A 92 TGVL-DVDGNVDMPRMEKIMAAAG--PLAVTFHRAFDMCANPLYTLNNLAELGI 142 (256)
T ss_dssp ECCB-CTTSSBCHHHHHHHHHHHT--TSEEEECGGGGGCSCHHHHHHHHHHHTC
T ss_pred EeeE-CCCCCcCHHHHHHHHHHhC--CCcEEEECchhccCCHHHHHHHHHHcCC
Confidence 5322 2223578999999998875 8899999 4332 222333445555554
No 147
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=61.72 E-value=69 Score=28.85 Aligned_cols=97 Identities=15% Similarity=0.111 Sum_probs=57.4
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc--cCCHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~--~~p~~ 266 (427)
+.|++++-+.-+....+.++.++-+++++.+.+. .++|.+++. +..+..+..+++++.|....-..+. ..|+.
T Consensus 44 ~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~ 123 (301)
T 1xky_A 44 DNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPYYNKPSQ 123 (301)
T ss_dssp HTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCH
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCH
Confidence 6788887554443445567888888877776543 478888863 3344444446677788754322111 24444
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 267 LEGEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 267 ~e~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
.+.. .-...++...+.++.+-+..
T Consensus 124 ~~l~--~~f~~va~a~~lPiilYn~P 147 (301)
T 1xky_A 124 EGMY--QHFKAIAESTPLPVMLYNVP 147 (301)
T ss_dssp HHHH--HHHHHHHHTCSSCEEEEECH
T ss_pred HHHH--HHHHHHHHhcCCCEEEEeCc
Confidence 3322 23334455567888887764
No 148
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=61.68 E-value=87 Score=28.23 Aligned_cols=97 Identities=15% Similarity=0.071 Sum_probs=58.2
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc--cCCHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~--~~p~~ 266 (427)
+.|++++-+.-+....+.++.++-+++++.+.+. .++|.+++. +..+..+..+++++.|....-..+. ..|+.
T Consensus 48 ~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~ 127 (304)
T 3cpr_A 48 DKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTPYYSKPSQ 127 (304)
T ss_dssp HTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCH
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCH
Confidence 6799887654444445667888888877776652 478888863 3344444456677888764322211 23443
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 267 LEGEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 267 ~e~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
.+.. .-...++...+.++.+-+..
T Consensus 128 ~~l~--~~f~~ia~a~~lPiilYn~P 151 (304)
T 3cpr_A 128 EGLL--AHFGAIAAATEVPICLYDIP 151 (304)
T ss_dssp HHHH--HHHHHHHHHCCSCEEEEECH
T ss_pred HHHH--HHHHHHHHhcCCCEEEEeCc
Confidence 3332 23334455668888888864
No 149
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=61.61 E-value=66 Score=28.84 Aligned_cols=97 Identities=10% Similarity=0.018 Sum_probs=58.0
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc--cCCHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~--~~p~~ 266 (427)
+.|++++-+.-+....+.++.++-+++++.+.+. .++|.+++. +..+..+..+++++.|....-..+. ..|+.
T Consensus 32 ~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~ 111 (294)
T 2ehh_A 32 DNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVPYYNKPTQ 111 (294)
T ss_dssp TTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCH
T ss_pred HCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCH
Confidence 6788887554444445568888888877776652 478888863 3344444446677888764422211 24444
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 267 LEGEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 267 ~e~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
.+.. .-...++...+.++.+-+..
T Consensus 112 ~~l~--~~f~~va~a~~lPiilYn~P 135 (294)
T 2ehh_A 112 RGLY--EHFKTVAQEVDIPIIIYNIP 135 (294)
T ss_dssp HHHH--HHHHHHHHHCCSCEEEEECH
T ss_pred HHHH--HHHHHHHHhcCCCEEEEeCC
Confidence 3333 23334455668888887764
No 150
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=61.59 E-value=78 Score=31.21 Aligned_cols=108 Identities=9% Similarity=0.044 Sum_probs=58.6
Q ss_pred HHHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhccccceeceeccccCCChhhHHH-HHHHHHHcCCCeEEEEEe
Q 014320 128 FSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDE-MEVMVKEKGINSFKFFMA 205 (427)
Q Consensus 128 ~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~g~~~ik~~~~ 205 (427)
....+.++.+|+..++-+...... .....++..++.+......+....+. ..+.+...+ .+++. +.|++.|.+. +
T Consensus 120 ~~~ve~a~~aGvd~vrIf~s~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~-~~~~e~~~~~a~~l~-~~Gad~I~L~-D 196 (539)
T 1rqb_A 120 DRFVDKSAENGMDVFRVFDAMNDPRNMAHAMAAVKKAGKHAQGTICYTISP-VHTVEGYVKLAGQLL-DMGADSIALK-D 196 (539)
T ss_dssp HHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCST-TCCHHHHHHHHHHHH-HTTCSEEEEE-E
T ss_pred HHHHHHHHhCCCCEEEEEEehhHHHHHHHHHHHHHHCCCeEEEEEEeeeCC-CCCHHHHHHHHHHHH-HcCCCEEEeC-C
Confidence 344667788999887754332222 34445555555543322122222221 223333333 44444 7898876543 2
Q ss_pred cCCCccCCHHHHHHHHHHHHH-c--CCcEEEecCChhh
Q 014320 206 YKGSFMINDELLIEGFKRCKS-L--GALAMVHAENGDA 240 (427)
Q Consensus 206 ~~~~~~~~~~~l~~~~~~a~~-~--g~~v~~H~e~~~~ 240 (427)
..| ...+..+.++++..++ . ++++.+|+.++..
T Consensus 197 T~G--~~~P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~G 232 (539)
T 1rqb_A 197 MAA--LLKPQPAYDIIKAIKDTYGQKTQINLHCHSTTG 232 (539)
T ss_dssp TTC--CCCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTS
T ss_pred CCC--CcCHHHHHHHHHHHHHhcCCCceEEEEeCCCCC
Confidence 222 3568888888777654 4 6889999866543
No 151
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=61.34 E-value=71 Score=28.55 Aligned_cols=97 Identities=13% Similarity=0.085 Sum_probs=58.4
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc--cCCHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~--~~p~~ 266 (427)
+.|++++-+.-+....+.++.++-+++++.+.+. .++|.+++. +..+..+..+++++.|....-..+. ..|+.
T Consensus 32 ~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~ 111 (289)
T 2yxg_A 32 ENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYYNKPTQ 111 (289)
T ss_dssp HTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCH
T ss_pred HCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCH
Confidence 6899988654444445668888888887776542 478888863 3344444446677888764422211 24544
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 267 LEGEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 267 ~e~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
.+... -...++...+.++.+-+..
T Consensus 112 ~~l~~--~f~~ia~a~~lPiilYn~P 135 (289)
T 2yxg_A 112 EGLRK--HFGKVAESINLPIVLYNVP 135 (289)
T ss_dssp HHHHH--HHHHHHHHCSSCEEEEECH
T ss_pred HHHHH--HHHHHHHhcCCCEEEEeCc
Confidence 33332 3334455667888887764
No 152
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=61.06 E-value=40 Score=30.47 Aligned_cols=54 Identities=7% Similarity=-0.149 Sum_probs=35.7
Q ss_pred hhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc--CCcEEEecCChh
Q 014320 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL--GALAMVHAENGD 239 (427)
Q Consensus 183 ~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~--g~~v~~H~e~~~ 239 (427)
+...++.+.+.+.|++.+.+. +..|. .++....++++..++. ++++.+|+.++.
T Consensus 159 ~~~~~~~~~~~~~G~d~i~l~-DT~G~--~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~ 214 (302)
T 2ftp_A 159 RQVAWVARELQQMGCYEVSLG-DTIGV--GTAGATRRLIEAVASEVPRERLAGHFHDTY 214 (302)
T ss_dssp HHHHHHHHHHHHTTCSEEEEE-ESSSC--CCHHHHHHHHHHHTTTSCGGGEEEEEBCTT
T ss_pred HHHHHHHHHHHHcCCCEEEEe-CCCCC--cCHHHHHHHHHHHHHhCCCCeEEEEeCCCc
Confidence 334444333337899988665 55554 5788888888877653 578999986654
No 153
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=61.00 E-value=88 Score=28.13 Aligned_cols=47 Identities=6% Similarity=0.031 Sum_probs=29.2
Q ss_pred HHHHHHHHHcCCCeEEEEEecCCCcc----CCHHHHHHHHHHHHHcCCcEE
Q 014320 186 DEMEVMVKEKGINSFKFFMAYKGSFM----INDELLIEGFKRCKSLGALAM 232 (427)
Q Consensus 186 ~~~~~l~~~~g~~~ik~~~~~~~~~~----~~~~~l~~~~~~a~~~g~~v~ 232 (427)
.+..+.+++.|.+++.+...+..... .+++.+.++.+.++++|+.+.
T Consensus 18 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 68 (340)
T 2zds_A 18 EEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCW 68 (340)
T ss_dssp HHHHHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeEE
Confidence 33333334789999988753211110 134567888888999999885
No 154
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=60.85 E-value=83 Score=27.72 Aligned_cols=122 Identities=15% Similarity=0.045 Sum_probs=67.4
Q ss_pred hhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc-CCcEEEecCChhhHHHHHHHHHHcCCCCcccccc
Q 014320 183 VVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHAENGDAVFEGQKRMIELGITGPEGHAL 261 (427)
Q Consensus 183 ~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~ 261 (427)
...+..++++ +.|++.|.+..+. .....++++++++...++. ++++.+=..+.+..+.+.+.+. |..-...
T Consensus 26 ~a~~~a~~~v-~~GAdiIDIg~g~--~~v~~~ee~~rvv~~i~~~~~~pisIDT~~~~v~~aAl~a~~--Ga~iINd--- 97 (262)
T 1f6y_A 26 PVQEWARRQE-EGGARALDLNVGP--AVQDKVSAMEWLVEVTQEVSNLTLCLDSTNIKAIEAGLKKCK--NRAMINS--- 97 (262)
T ss_dssp HHHHHHHHHH-HHTCSEEEEBCC------CHHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHCS--SCEEEEE---
T ss_pred HHHHHHHHHH-HCCCcEEEECCCC--CCCChHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHhhCC--CCCEEEE---
Confidence 3444555555 6788877765421 1223466788877777665 7788887666665554443321 3211110
Q ss_pred cCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCC------H-----HHHHHHHHHhhcCCC---EEEecC
Q 014320 262 SRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS------M-----DAMEEIAKARKAGQR---VIGEPV 315 (427)
Q Consensus 262 ~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~------~-----~~~~~i~~~~~~G~~---v~~~~~ 315 (427)
.... .+...+.+.+++++++++.+.|... . .-.+.++.+.+.|++ +..++.
T Consensus 98 -vs~~--~d~~~~~~~~~a~~~~~vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~~~Gi~~~~IilDPg 162 (262)
T 1f6y_A 98 -TNAE--REKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMELVAAADEFGLPMEDLYIDPL 162 (262)
T ss_dssp -ECSC--HHHHHHHHHHHHHTTCEEEEESCCSSCSCSSHHHHHHHHHHHHHHHHHHTCCGGGEEEECC
T ss_pred -CCCC--cccHHHHHHHHHHhCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEeCC
Confidence 0000 1334456777888999999999721 1 113456667778873 555443
No 155
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=60.45 E-value=64 Score=29.78 Aligned_cols=97 Identities=14% Similarity=0.158 Sum_probs=58.3
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc--cC-CHHHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SR-PPLLE 268 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~--~~-p~~~e 268 (427)
+.|++++-+.-+....+.++.++-+++++.+....++|.+++. +..+..+..+++++.|....-..+. .. |+..+
T Consensus 58 ~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~~s~~~ 137 (344)
T 2hmc_A 58 ADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRVLSRGSVIAA 137 (344)
T ss_dssp HTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCSSSTTCHHH
T ss_pred HcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCccCCCCCHHH
Confidence 6889887654444445678898888888875455689999973 3334444446677788764432221 23 33332
Q ss_pred HHHHHHHHHHHH-hcCCCEEEEcCC
Q 014320 269 GEATTRAIRLAE-FVNTPLYVVHVM 292 (427)
Q Consensus 269 ~~a~~~~~~~~~-~~g~~~~i~H~~ 292 (427)
.. .-...++. ..+.++.+-+..
T Consensus 138 l~--~~f~~IA~aa~~lPiilYn~P 160 (344)
T 2hmc_A 138 QK--AHFKAILSAAPEIPAVIYNSP 160 (344)
T ss_dssp HH--HHHHHHHHHSTTSCEEEEEBG
T ss_pred HH--HHHHHHHhhCCCCcEEEEecC
Confidence 22 22333444 567888887765
No 156
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=59.89 E-value=69 Score=29.37 Aligned_cols=97 Identities=10% Similarity=-0.011 Sum_probs=58.5
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc--cCCHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~--~~p~~ 266 (427)
..|++++-+.-+....+.++.++-+++++.+.+. .++|.+++. +..+..+..+++++.|..+.-..+. ..|+.
T Consensus 66 ~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~ 145 (332)
T 2r8w_A 66 AAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPVSYTPLTQ 145 (332)
T ss_dssp HHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCSSCCCH
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCH
Confidence 6799988654444445678888888887776653 478888863 3344444456677888764322211 24444
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 267 LEGEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 267 ~e~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
.+... -...++...+.++.+-+..
T Consensus 146 ~~l~~--~f~~VA~a~~lPiilYn~P 169 (332)
T 2r8w_A 146 EEAYH--HFAAVAGATALPLAIYNNP 169 (332)
T ss_dssp HHHHH--HHHHHHHHCSSCEEEECCH
T ss_pred HHHHH--HHHHHHHhcCCCEEEEeCc
Confidence 33332 2334455668888888764
No 157
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=59.74 E-value=15 Score=32.68 Aligned_cols=76 Identities=9% Similarity=0.056 Sum_probs=43.0
Q ss_pred HHHHHHHHHhcCCCEEEEcCCC----HHHHHHHHHHhhcCCCEEEecCccceeeCcccccCCCcccCceeEEcCCCCCcc
Q 014320 272 TTRAIRLAEFVNTPLYVVHVMS----MDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASG 347 (427)
Q Consensus 272 ~~~~~~~~~~~g~~~~i~H~~~----~~~~~~i~~~~~~G~~v~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~pplr~~~ 347 (427)
+.+.+..+...|.-..+.|..- ....+.++.+++.|+.+ ++.-..+. + .....
T Consensus 118 ~~~~l~~i~~~g~v~ILAHPeRy~~~~~~~~~l~~l~~~G~~i--EiN~~s~~--------------------g-~~g~~ 174 (262)
T 3qy7_A 118 AEQLFYDLQLKGYIPVIAHPERNREIRENPSLLYHLVEKGAAS--QITSGSLA--------------------G-IFGKQ 174 (262)
T ss_dssp HHHHHHHHHHTTCEEEEECGGGCHHHHHCTHHHHHHHHTTCEE--EEEHHHHH--------------------T-TTCHH
T ss_pred HHHHHHHHHHCCCcEEEECCCccccccccHHHHHHHHHCCCEE--EEECCccC--------------------c-ccchH
Confidence 3444455555565566888742 12235678888888533 33321110 0 00122
Q ss_pred cHHHHHHHHhcCCceEEecC-CCC
Q 014320 348 HNKALQAALATGILQLVGTD-HCA 370 (427)
Q Consensus 348 ~~~~l~~~l~~G~~~~lgSD-~~p 370 (427)
.++..+.+++.|..+++||| |.|
T Consensus 175 ~~~~~~~~~~~gl~~~igSDaH~~ 198 (262)
T 3qy7_A 175 LKAFSLRLVEANLIHFVASDAHNV 198 (262)
T ss_dssp HHHHHHHHHHTTCCCEEECCBCSS
T ss_pred HHHHHHHHHhCCCeEEEEccCCCC
Confidence 34556678889999999999 444
No 158
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=59.69 E-value=20 Score=32.69 Aligned_cols=44 Identities=14% Similarity=-0.004 Sum_probs=29.5
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecCC
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAEN 237 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e~ 237 (427)
+.|++++-+.-+....+.++.++-+++++.+.+. .++|.+++..
T Consensus 44 ~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~ 90 (314)
T 3d0c_A 44 QNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGY 90 (314)
T ss_dssp HTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS
T ss_pred HcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCc
Confidence 6788887443333334567888888877776542 5788888754
No 159
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=59.56 E-value=50 Score=31.00 Aligned_cols=32 Identities=6% Similarity=0.122 Sum_probs=27.3
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEecCChhhHHH
Q 014320 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFE 243 (427)
Q Consensus 212 ~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~ 243 (427)
++.+.++.+.+.+++.|+++..-+-+.+.++.
T Consensus 98 l~~e~~~~L~~~~~~~Gi~~~stpfD~~svd~ 129 (385)
T 1vli_A 98 MPAEWILPLLDYCREKQVIFLSTVCDEGSADL 129 (385)
T ss_dssp SCGGGHHHHHHHHHHTTCEEECBCCSHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEccCCHHHHHH
Confidence 57788999999999999999998888777643
No 160
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=59.12 E-value=49 Score=28.70 Aligned_cols=111 Identities=19% Similarity=0.061 Sum_probs=63.9
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHH-hccccceeceeccccCCChhhHHHHHHHHHHcCCC
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKK-AKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGIN 198 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 198 (427)
...+.+++......+..+|+-+++-.. ......+.+... ..+...-.+|+.+. ...+....+.++.+ +.|++
T Consensus 31 p~~t~~~i~~l~~~a~~~~~~aVcv~p-----~~v~a~~~l~~~~~v~v~tvigFP~G~-~~~~~k~~e~~~Av-~~GAd 103 (234)
T 1n7k_A 31 PRATEEDVRNLVREASDYGFRCAVLTP-----VYTVKISGLAEKLGVKLCSVIGFPLGQ-APLEVKLVEAQTVL-EAGAT 103 (234)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEECH-----HHHHHHHHHHHHHTCCEEEEESTTTCC-SCHHHHHHHHHHHH-HHTCC
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEch-----HHheeehHhCCCCCceEEEEeCCCCCC-CcHHHHHHHHHHHH-HcCCC
Confidence 345788888889999999999998431 112222222222 11111111222221 12233456677777 78999
Q ss_pred eEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 199 SFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 199 ~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
.+.+.+........-.+++.++.+.++++|+++-+=.|.
T Consensus 104 EID~vinig~~~~~v~~ei~~v~~a~~~~g~~lKvIlEt 142 (234)
T 1n7k_A 104 ELDVVPHLSLGPEAVYREVSGIVKLAKSYGAVVKVILEA 142 (234)
T ss_dssp EEEECCCGGGCHHHHHHHHHHHHHHHHHTTCEEEEECCG
T ss_pred EEEEeccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEec
Confidence 998877654322222456777888888888887555554
No 161
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=58.70 E-value=92 Score=27.10 Aligned_cols=46 Identities=13% Similarity=0.177 Sum_probs=31.9
Q ss_pred HHHHHcCCCeEEEEEecCC---CccCCHHHHHHHHHHHHHcCCc---EEEec
Q 014320 190 VMVKEKGINSFKFFMAYKG---SFMINDELLIEGFKRCKSLGAL---AMVHA 235 (427)
Q Consensus 190 ~l~~~~g~~~ik~~~~~~~---~~~~~~~~l~~~~~~a~~~g~~---v~~H~ 235 (427)
+.+.+.|.+.+.++..... ....+++.+.++.+.++++|+. +.+|.
T Consensus 19 ~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~ 70 (285)
T 1qtw_A 19 IRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHD 70 (285)
T ss_dssp HHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTTCCGGGBCCBC
T ss_pred HHHHHcCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCCceeEEecC
Confidence 3333789999987532211 1235678889999999999998 77885
No 162
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=58.33 E-value=81 Score=28.42 Aligned_cols=97 Identities=8% Similarity=-0.006 Sum_probs=56.6
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc--cCCHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~--~~p~~ 266 (427)
+.|++++-+.-+....+.++.++-+++++.+.+. .++|.+++. +..+..+..+++++.|....-..+. ..|+.
T Consensus 43 ~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~ 122 (303)
T 2wkj_A 43 QQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPFSF 122 (303)
T ss_dssp HTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCH
T ss_pred HcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCCCCCCCH
Confidence 6889887654444445567888888877776552 578888963 3334444446677778754322211 23444
Q ss_pred HHHHHHHHHHHHHHhcC-CCEEEEcCC
Q 014320 267 LEGEATTRAIRLAEFVN-TPLYVVHVM 292 (427)
Q Consensus 267 ~e~~a~~~~~~~~~~~g-~~~~i~H~~ 292 (427)
.+..... ..++...+ .++.+-+..
T Consensus 123 ~~l~~~f--~~va~a~~~lPiilYn~P 147 (303)
T 2wkj_A 123 EEHCDHY--RAIIDSADGLPMVVYNIP 147 (303)
T ss_dssp HHHHHHH--HHHHHHHTTCCEEEEECH
T ss_pred HHHHHHH--HHHHHhCCCCCEEEEeCc
Confidence 3333222 23344556 788887753
No 163
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=58.17 E-value=1e+02 Score=27.35 Aligned_cols=123 Identities=15% Similarity=0.041 Sum_probs=69.2
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc-CCcEEEecCChhhHHHHHHHHHHcCCCCccccc
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-GALAMVHAENGDAVFEGQKRMIELGITGPEGHA 260 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~ 260 (427)
+...+..+++. +.|++.+.+..... ..-..+.+..+++..++. ++++.+=..+.+.++.+.+.+. |..-....
T Consensus 34 ~~a~~~a~~~v-~~GAdiIDIg~~s~--~~eE~~rv~~vi~~l~~~~~~pisIDT~~~~v~~aal~a~~--Ga~iINdv- 107 (271)
T 2yci_X 34 RPIQEWARRQA-EKGAHYLDVNTGPT--ADDPVRVMEWLVKTIQEVVDLPCCLDSTNPDAIEAGLKVHR--GHAMINST- 107 (271)
T ss_dssp HHHHHHHHHHH-HTTCSEEEEECCSC--SSCHHHHHHHHHHHHHHHCCCCEEEECSCHHHHHHHHHHCC--SCCEEEEE-
T ss_pred HHHHHHHHHHH-HCCCCEEEEcCCcC--chhHHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHhCC--CCCEEEEC-
Confidence 34455556666 68888887765431 111345566666666554 8888887776666655443321 32111100
Q ss_pred ccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCC------CH-----HHHHHHHHHhhcCCC---EEEecC
Q 014320 261 LSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM------SM-----DAMEEIAKARKAGQR---VIGEPV 315 (427)
Q Consensus 261 ~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~------~~-----~~~~~i~~~~~~G~~---v~~~~~ 315 (427)
... .+...+.+.+++++|+++.+.|.. +. .-.+.++.+.+.|++ +..++.
T Consensus 108 ---s~~--~d~~~~~~~~~a~~~~~vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~~~Gi~~~~IilDPg 171 (271)
T 2yci_X 108 ---SAD--QWKMDIFFPMAKKYEAAIIGLTMNEKGVPKDANDRSQLAMELVANADAHGIPMTELYIDPL 171 (271)
T ss_dssp ---CSC--HHHHHHHHHHHHHHTCEEEEESCBTTBCCCSHHHHHHHHHHHHHHHHHTTCCGGGEEEECC
T ss_pred ---CCC--ccccHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEecC
Confidence 001 122355677778889999999972 11 123456667788875 555444
No 164
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=58.07 E-value=77 Score=28.37 Aligned_cols=106 Identities=13% Similarity=0.016 Sum_probs=60.9
Q ss_pred hHHHHH-HHHHH-cCCCeEEEEEecCCCccCCHHHHHHHHHHHHH---cCCcEEEecC--ChhhHHHHHHHHHHcCCCCc
Q 014320 184 VSDEME-VMVKE-KGINSFKFFMAYKGSFMINDELLIEGFKRCKS---LGALAMVHAE--NGDAVFEGQKRMIELGITGP 256 (427)
Q Consensus 184 ~~~~~~-~l~~~-~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~---~g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~ 256 (427)
.++.+. .++ + .|++++-+.-+....+.++.++-+++++.+.+ ..++|.+++. +..+..+..+++++.|....
T Consensus 25 ~l~~lv~~li-~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadav 103 (293)
T 1f6k_A 25 GLRQIIRHNI-DKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCL 103 (293)
T ss_dssp HHHHHHHHHH-HTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHH-hhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEE
Confidence 343333 344 6 79998765444444567888888887777654 2578888863 33444444466777887644
Q ss_pred ccccc--cCCHHHHHHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 257 EGHAL--SRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 257 ~~~~~--~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
-..+. ..|+..+... -...++...+.++.+-+..
T Consensus 104 lv~~P~y~~~~~~~l~~--~f~~va~a~~lPiilYn~P 139 (293)
T 1f6k_A 104 SAVTPFYYKFSFPEIKH--YYDTIIAETGSNMIVYSIP 139 (293)
T ss_dssp EEECCCSSCCCHHHHHH--HHHHHHHHHCCCEEEEECH
T ss_pred EECCCCCCCCCHHHHHH--HHHHHHHhCCCCEEEEECc
Confidence 22211 2344433322 2333445567788887753
No 165
>4dzi_A Putative TIM-barrel metal-dependent hydrolase; amidohydrolase, bimetal binding site, enzyme FUNC initiative, EFI; HET: SO4; 1.60A {Mycobacterium avium subsp}
Probab=57.94 E-value=8.5 Score=36.93 Aligned_cols=56 Identities=13% Similarity=0.083 Sum_probs=43.2
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEec----CCCccCCHHHHHHHHHHHHHcCCcEEEecCCh
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAY----KGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~----~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~ 238 (427)
+...++++++. +.|+.++++...+ .+....+++.+..+.+.+.++|++|.+|+.+.
T Consensus 175 ~~a~~EL~r~~-~~G~~Gv~l~p~~~~~~~g~~~l~d~~~~pl~~~~~elg~pV~iH~g~~ 234 (423)
T 4dzi_A 175 TRAVEEVDFVL-ARGAKLVLVRPAPVPGLVKPRSLGDRSHDPVWARLAEAGVPVGFHLSDS 234 (423)
T ss_dssp HHHHHHHHHHH-HTTCSCEECCSSCBCCSSSCBCTTCGGGHHHHHHHHHHTCCEEEECCCC
T ss_pred HHHHHHHHHHH-HcCCeEEEEecCCCCCCCCCCCCCCccHHHHHHHHHhcCCeEEEeCCCC
Confidence 45678888888 5899999875322 23345677889999999999999999998543
No 166
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=57.69 E-value=37 Score=30.53 Aligned_cols=43 Identities=14% Similarity=0.074 Sum_probs=30.1
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecC
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE 236 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e 236 (427)
+.|++++-+.-+....+.++.++-.++++.+.+.-..|.+++.
T Consensus 31 ~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~gviaGvg 73 (293)
T 1w3i_A 31 RKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNKIIFQVG 73 (293)
T ss_dssp HTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSCEEEECC
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCCEEEecC
Confidence 6899987654444445678999999999988765222777763
No 167
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=57.65 E-value=55 Score=29.36 Aligned_cols=97 Identities=9% Similarity=-0.046 Sum_probs=57.0
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc--cCCHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~--~~p~~ 266 (427)
+.|++++-+.-+....+.++.++-+++++.+.+. .++|.+++. +..+..+..+++++.|....-..+. ..|+.
T Consensus 32 ~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~ 111 (292)
T 2vc6_A 32 EEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYYNKPTQ 111 (292)
T ss_dssp HTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCH
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCH
Confidence 6788887544333344567888888877777653 578888863 3334444446677788764422211 23444
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 267 LEGEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 267 ~e~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
.+.. .-...++...+.++.+-+..
T Consensus 112 ~~l~--~~f~~ia~a~~lPiilYn~P 135 (292)
T 2vc6_A 112 EGIY--QHFKAIDAASTIPIIVYNIP 135 (292)
T ss_dssp HHHH--HHHHHHHHHCSSCEEEEECH
T ss_pred HHHH--HHHHHHHHhCCCCEEEEeCc
Confidence 3332 22334455668888887753
No 168
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=57.30 E-value=70 Score=28.88 Aligned_cols=97 Identities=16% Similarity=0.110 Sum_probs=56.4
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc--cCCHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~--~~p~~ 266 (427)
..|++++-+.-+....+.++.++-+++++.+.+. .++|.+++. +..+..+..+++++.|....-..+. ..|+.
T Consensus 44 ~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~s~ 123 (306)
T 1o5k_A 44 ENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQ 123 (306)
T ss_dssp HTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCH
T ss_pred HcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCH
Confidence 6788887654444445567888887777776543 478888863 3334444446677777754322111 24444
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 267 LEGEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 267 ~e~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
.+.. .-...++...+.++.+-+..
T Consensus 124 ~~l~--~~f~~va~a~~lPiilYn~P 147 (306)
T 1o5k_A 124 EGLY--QHYKYISERTDLGIVVYNVP 147 (306)
T ss_dssp HHHH--HHHHHHHTTCSSCEEEEECH
T ss_pred HHHH--HHHHHHHHhCCCCEEEEeCc
Confidence 3322 22334455567888887754
No 169
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=56.88 E-value=77 Score=29.19 Aligned_cols=97 Identities=10% Similarity=-0.004 Sum_probs=56.8
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc--cCCHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~--~~p~~ 266 (427)
+.|++++-+.-+....+.++.++-.++++.+.+. .++|.+++. +..+..+..+++++.|....-..+. ..|+.
T Consensus 63 ~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~ 142 (343)
T 2v9d_A 63 KAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYYWKVSE 142 (343)
T ss_dssp HTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECCSSSCCCH
T ss_pred HcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCH
Confidence 6788887554443444667888887777776543 578888863 3334444446677778754422211 23443
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 267 LEGEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 267 ~e~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
.+.. .-...++...+.++.+-+..
T Consensus 143 ~~l~--~~f~~VA~a~~lPiilYn~P 166 (343)
T 2v9d_A 143 ANLI--RYFEQVADSVTLPVMLYNFP 166 (343)
T ss_dssp HHHH--HHHHHHHHTCSSCEEEEECH
T ss_pred HHHH--HHHHHHHHhcCCCEEEEeCc
Confidence 3332 22334455567888887764
No 170
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=56.00 E-value=97 Score=28.78 Aligned_cols=46 Identities=11% Similarity=-0.120 Sum_probs=33.4
Q ss_pred CCHHHHHHHHHHHHHHHHhc-CCCEEEEcC-CC-HHHHHHHHHHhhc-CCC
Q 014320 263 RPPLLEGEATTRAIRLAEFV-NTPLYVVHV-MS-MDAMEEIAKARKA-GQR 309 (427)
Q Consensus 263 ~p~~~e~~a~~~~~~~~~~~-g~~~~i~H~-~~-~~~~~~i~~~~~~-G~~ 309 (427)
.+...+.......+++++++ |.++ +.|+ .. ....+.++.+++. |++
T Consensus 172 ~~t~~q~~~f~aq~~~A~~~~glPV-~iH~~r~~~a~~e~l~iL~e~~~~~ 221 (365)
T 3rhg_A 172 FFTDGEKNSLRAAALAQNNNPYASM-NIHMPGWQRRGDEVLDILLTEMGCD 221 (365)
T ss_dssp TCCHHHHHHHHHHHHHHTTCTTCEE-EEECCTTSCCHHHHHHHHTTTTCCC
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCcE-EEECCCCCcCHHHHHHHHHhccCCC
Confidence 35566778888999999999 9985 7786 31 2235778888877 754
No 171
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=55.72 E-value=74 Score=28.60 Aligned_cols=97 Identities=11% Similarity=0.000 Sum_probs=57.7
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc--cCCHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~--~~p~~ 266 (427)
+.|++++-+.-+....+.++.++-+++++.+.+. .++|.+++. +..+..+..+++++.|....-..+. ..|+.
T Consensus 32 ~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~ 111 (297)
T 2rfg_A 32 KHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAGYYNRPSQ 111 (297)
T ss_dssp HTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTTCCCH
T ss_pred HcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCH
Confidence 6899887554443445668888888887776552 478888863 3344444446677788754322211 23444
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 267 LEGEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 267 ~e~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
.+.. .-...++...+.++.+-+..
T Consensus 112 ~~l~--~~f~~va~a~~lPiilYn~P 135 (297)
T 2rfg_A 112 EGLY--QHFKMVHDAIDIPIIVYNIP 135 (297)
T ss_dssp HHHH--HHHHHHHHHCSSCEEEEECH
T ss_pred HHHH--HHHHHHHHhcCCCEEEEeCc
Confidence 3333 23334455668888888764
No 172
>3neh_A Renal dipeptidase family protein; structural genomics, nysgrc, dipeptide L-Leu-D-Ala, PSI-2, P structure initiative; HET: L3A; 1.64A {Listeria monocytogenes} PDB: 3lu2_A
Probab=54.70 E-value=84 Score=28.59 Aligned_cols=51 Identities=10% Similarity=0.127 Sum_probs=33.5
Q ss_pred ceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 361 LQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 361 ~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
.+.||||.... ...|.|+.... .+|.+...+.+ ++|-+++-+++-.|-=|+
T Consensus 257 hVgiGsDfDG~------------~~~p~gl~d~s-~~p~L~~~L~~--g~se~~i~ki~g~N~lRv 307 (318)
T 3neh_A 257 NIGFGSDFDGI------------PDHVKGLEHVG-KYQSFLETLEK--HYTKEEIEGFASRNFLNH 307 (318)
T ss_dssp GEEECCCBTSC------------SSCBBTBSSGG-GHHHHHHHHTT--TSCHHHHHHHHTHHHHHT
T ss_pred eEEECCCCCCC------------CCCCCCCCCHH-HHHHHHHHHHh--cCCHHHHHHHHhHhHHHH
Confidence 48999996321 12234554443 56777655544 699999999998886543
No 173
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=54.66 E-value=1.1e+02 Score=27.72 Aligned_cols=109 Identities=12% Similarity=-0.052 Sum_probs=63.2
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc--CCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc-cCCHHHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL--GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL-SRPPLLE 268 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~--g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~-~~p~~~e 268 (427)
+.|++++-+.-+....+.++.++-+++++.+.+. .++|.+++. +..+..+..+++++.|....-..+. ..|+..+
T Consensus 40 ~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~~~~s~~~ 119 (313)
T 3dz1_A 40 EVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPPPSLRTDEQ 119 (313)
T ss_dssp HTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTCCSHHH
T ss_pred HCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHH
Confidence 6899988554444445677888888888777654 588998863 3344444456777888754322111 2344333
Q ss_pred HHHHHHHHHHHHhcC--CCEEEEcCCCHH----HHHHHHHHh
Q 014320 269 GEATTRAIRLAEFVN--TPLYVVHVMSMD----AMEEIAKAR 304 (427)
Q Consensus 269 ~~a~~~~~~~~~~~g--~~~~i~H~~~~~----~~~~i~~~~ 304 (427)
. +.-...++...+ .++.+-+..... +.+.+.++.
T Consensus 120 l--~~~f~~va~a~~~~lPiilYn~P~~tg~~l~~~~~~~La 159 (313)
T 3dz1_A 120 I--TTYFRQATEAIGDDVPWVLQDYPLTLSVVMTPKVIRQIV 159 (313)
T ss_dssp H--HHHHHHHHHHHCTTSCEEEEECHHHHCCCCCHHHHHHHH
T ss_pred H--HHHHHHHHHhCCCCCcEEEEeCccccCcCCCHHHHHHHH
Confidence 2 233334445556 888888764221 135566554
No 174
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=54.48 E-value=90 Score=28.24 Aligned_cols=102 Identities=11% Similarity=0.089 Sum_probs=59.6
Q ss_pred HHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC--ChhhHHHHHHHHHHcCC-CCcccccc
Q 014320 188 MEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGI-TGPEGHAL 261 (427)
Q Consensus 188 ~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e--~~~~~~~~~~~l~~~G~-~~~~~~~~ 261 (427)
++.++ +.|++++-+.-+....+.++.++-+++++.+.+. .++|.+++. +..+..+..+++++.|. ...-..+.
T Consensus 34 v~~li-~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~P 112 (311)
T 3h5d_A 34 IEHLL-AHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIVP 112 (311)
T ss_dssp HHHHH-HTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEECC
T ss_pred HHHHH-HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcCC
Confidence 33444 6889888655444445678888888888877664 478888863 33444444466777764 33221111
Q ss_pred --cCCHHHHHHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 262 --SRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 262 --~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
..|+..+. +.-...++...+.++.+-|..
T Consensus 113 ~y~~~s~~~l--~~~f~~va~a~~lPiilYn~P 143 (311)
T 3h5d_A 113 YYNKPSQEGM--YQHFKAIADASDLPIIIYNIP 143 (311)
T ss_dssp CSSCCCHHHH--HHHHHHHHHSCSSCEEEEECH
T ss_pred CCCCCCHHHH--HHHHHHHHHhCCCCEEEEecc
Confidence 23443322 333334455568888888764
No 175
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=54.33 E-value=16 Score=32.83 Aligned_cols=41 Identities=7% Similarity=0.087 Sum_probs=30.6
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecC
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE 236 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e 236 (427)
+. ++++-+.-+....+.++.++-+++++.+.+ .++|.+++.
T Consensus 30 ~~-v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~-rvpviaGvg 70 (283)
T 2pcq_A 30 PL-VDGLLVYGSNGEGVHLTPEERARGLRALRP-RKPFLVGLM 70 (283)
T ss_dssp GG-SSCCEETCTTTTGGGSCHHHHHHHHHTCCC-SSCCEEEEC
T ss_pred hh-CCEEEECCcCcCchhcCHHHHHHHHHHHHh-CCcEEEeCC
Confidence 45 777654433344567899999999999888 889999864
No 176
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=53.46 E-value=1.1e+02 Score=26.67 Aligned_cols=43 Identities=12% Similarity=-0.095 Sum_probs=27.0
Q ss_pred HHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEE-Eec
Q 014320 187 EMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAM-VHA 235 (427)
Q Consensus 187 ~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~-~H~ 235 (427)
+..+.+++.|.+++.++... ..+.+.++.+.++++|+.+. +|.
T Consensus 42 ~~l~~~~~~G~~~vEl~~~~------~~~~~~~~~~~l~~~gl~v~~~~~ 85 (287)
T 3kws_A 42 EKLDFMEKLGVVGFEPGGGG------LAGRVNEIKQALNGRNIKVSAICA 85 (287)
T ss_dssp HHHHHHHHTTCCEEECBSTT------CGGGHHHHHHHHTTSSCEECEEEC
T ss_pred HHHHHHHHcCCCEEEecCCc------hHHHHHHHHHHHHHcCCeEEEEec
Confidence 33333337888888765431 13456777777888898885 454
No 177
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=53.42 E-value=66 Score=27.61 Aligned_cols=57 Identities=14% Similarity=0.160 Sum_probs=36.3
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEe-cCCh---hhHHHHHHHHHHcCC
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH-AENG---DAVFEGQKRMIELGI 253 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H-~e~~---~~~~~~~~~l~~~G~ 253 (427)
+.|++++-+..- .....++.+.++++++.|+ +++++.| +-+. .......+.+.++|+
T Consensus 87 ~~GadGvV~G~L-t~dg~iD~~~~~~Li~~a~--~~~vTFHRAFD~~~~~d~~~ale~L~~lGv 147 (224)
T 2bdq_A 87 ELESDALVLGIL-TSNNHIDTEAIEQLLPATQ--GLPLVFHMAFDVIPKSDQKKSIDQLVALGF 147 (224)
T ss_dssp HTTCSEEEECCB-CTTSSBCHHHHHHHHHHHT--TCCEEECGGGGGSCTTTHHHHHHHHHHTTC
T ss_pred HcCCCEEEEeeE-CCCCCcCHHHHHHHHHHhC--CCeEEEECchhccCCcCHHHHHHHHHHcCC
Confidence 789998755322 2233578999999998875 8999999 5432 222333444555554
No 178
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=53.12 E-value=1.2e+02 Score=26.87 Aligned_cols=97 Identities=12% Similarity=-0.003 Sum_probs=56.8
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc--cC-CHHHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SR-PPLLE 268 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~--~~-p~~~e 268 (427)
+.|++++-+.-+....+.++.++-+++++.+.+.-..|.+++. +..+..+..+++++.|....-..+. .. |+..+
T Consensus 30 ~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~gvi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~ 109 (286)
T 2r91_A 30 SKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARRVIVQVASLNADEAIALAKYAESRGAEAVASLPPYYFPRLSERQ 109 (286)
T ss_dssp HTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSSEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCSSTTCCHHH
T ss_pred HCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCEEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHH
Confidence 6899887554443445678999888888887764222777763 3344444456677788754322211 23 44433
Q ss_pred HHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 269 GEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 269 ~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
.. .-...++...+.++.+-+..
T Consensus 110 l~--~~f~~va~a~~lPiilYn~P 131 (286)
T 2r91_A 110 IA--KYFRDLCSAVSIPVFLYNYP 131 (286)
T ss_dssp HH--HHHHHHHHHCSSCEEEEECH
T ss_pred HH--HHHHHHHHhcCCCEEEEeCh
Confidence 32 22333455567888887764
No 179
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=52.64 E-value=48 Score=30.16 Aligned_cols=96 Identities=14% Similarity=0.007 Sum_probs=52.8
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC-ChhhHHHHHHHHHHcCCCCcccccc--cCCHHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE-NGDAVFEGQKRMIELGITGPEGHAL--SRPPLL 267 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e-~~~~~~~~~~~l~~~G~~~~~~~~~--~~p~~~ 267 (427)
+.|++++-+.-+....+.++.++-+++++.+.+. .++|.+++. +..+..+..+++++.|....-..+. ..|+..
T Consensus 44 ~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~ 123 (316)
T 3e96_A 44 DNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAAGADAVMIHMPIHPYVTAG 123 (316)
T ss_dssp TTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHHTCSEEEECCCCCSCCCHH
T ss_pred HcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHH
Confidence 5788877443333344667888888777776553 478888863 2233333335667777654322111 233333
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEcC
Q 014320 268 EGEATTRAIRLAEFVNTPLYVVHV 291 (427)
Q Consensus 268 e~~a~~~~~~~~~~~g~~~~i~H~ 291 (427)
+. +.-...++...+.++.+-+.
T Consensus 124 ~l--~~~f~~va~a~~lPiilYn~ 145 (316)
T 3e96_A 124 GV--YAYFRDIIEALDFPSLVYFK 145 (316)
T ss_dssp HH--HHHHHHHHHHHTSCEEEEEC
T ss_pred HH--HHHHHHHHHhCCCCEEEEeC
Confidence 32 23333344445788877763
No 180
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=51.98 E-value=94 Score=27.56 Aligned_cols=47 Identities=21% Similarity=0.251 Sum_probs=31.8
Q ss_pred HHHHHHHcCCCeEEEEEecCCC---ccCCHHHHHHHHHHHHHcCC-cEEEec
Q 014320 188 MEVMVKEKGINSFKFFMAYKGS---FMINDELLIEGFKRCKSLGA-LAMVHA 235 (427)
Q Consensus 188 ~~~l~~~~g~~~ik~~~~~~~~---~~~~~~~l~~~~~~a~~~g~-~v~~H~ 235 (427)
++.+ .+.|.+.+.++...... ...+++.+.++.+.++++|+ .+.+|+
T Consensus 24 l~~~-~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~h~ 74 (303)
T 3aal_A 24 SEEA-ASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIEEIVVHA 74 (303)
T ss_dssp HHHH-HHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHH-HHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCCceEEEec
Confidence 4444 37899999886543211 12345677788888889999 789996
No 181
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=51.93 E-value=43 Score=30.20 Aligned_cols=97 Identities=8% Similarity=-0.047 Sum_probs=57.2
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEec--CChhhHHHHHHHHHHcCCCCcccccc--cCCHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHA--ENGDAVFEGQKRMIELGITGPEGHAL--SRPPL 266 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~--e~~~~~~~~~~~l~~~G~~~~~~~~~--~~p~~ 266 (427)
+.|++++-+.-+....+.++.++-+++++.+.+. .++|.+++ .+..+..+..+++++.|....-..+. ..|+.
T Consensus 36 ~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~ 115 (300)
T 3eb2_A 36 QAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILEAYFPLKD 115 (300)
T ss_dssp HTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEECCSSCCCH
T ss_pred HcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCH
Confidence 6788877443333334567888888777776553 46788885 34444445556777888754432221 23444
Q ss_pred HHHHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 267 LEGEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 267 ~e~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
.+. +.-...++...+.++.+-+..
T Consensus 116 ~~l--~~~f~~va~a~~lPiilYn~P 139 (300)
T 3eb2_A 116 AQI--ESYFRAIADAVEIPVVIYTNP 139 (300)
T ss_dssp HHH--HHHHHHHHHHCSSCEEEEECT
T ss_pred HHH--HHHHHHHHHHCCCCEEEEECc
Confidence 332 233344555567888888875
No 182
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=51.82 E-value=1.4e+02 Score=27.07 Aligned_cols=110 Identities=8% Similarity=0.004 Sum_probs=64.6
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc-c--CC-
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL-S--RP- 264 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~-~--~p- 264 (427)
+.|++++-+.-+....+.++.++-.++++.+.+. .++|.+++. +..+..+..+++++.|....-..+. . .|
T Consensus 43 ~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~kp~ 122 (318)
T 3qfe_A 43 RSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPAYFGKAT 122 (318)
T ss_dssp TTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCC---CC
T ss_pred HcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCC
Confidence 6789988665444445678888888888877653 578999963 3444444456777888754432222 1 22
Q ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEcCCCHH-----HHHHHHHHhh
Q 014320 265 PLLEGEATTRAIRLAEFVNTPLYVVHVMSMD-----AMEEIAKARK 305 (427)
Q Consensus 265 ~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~-----~~~~i~~~~~ 305 (427)
+..+ -+.-...++...+.++.+-+..... +.+.+.++.+
T Consensus 123 ~~~~--l~~~f~~ia~a~~lPiilYn~P~~t~g~~l~~~~~~~La~ 166 (318)
T 3qfe_A 123 TPPV--IKSFFDDVSCQSPLPVVIYNFPGVCNGIDLDSDMITTIAR 166 (318)
T ss_dssp CHHH--HHHHHHHHHHHCSSCEEEEECCC----CCCCHHHHHHHHH
T ss_pred CHHH--HHHHHHHHHhhCCCCEEEEeCCcccCCCCCCHHHHHHHHh
Confidence 2222 2233334455568888888876432 1355666554
No 183
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=49.93 E-value=1.3e+02 Score=26.22 Aligned_cols=47 Identities=26% Similarity=0.214 Sum_probs=33.3
Q ss_pred HHHHHHHcCCCeEEEEEecCC---CccCCHHHHHHHHHHHHHcCCc---EEEec
Q 014320 188 MEVMVKEKGINSFKFFMAYKG---SFMINDELLIEGFKRCKSLGAL---AMVHA 235 (427)
Q Consensus 188 ~~~l~~~~g~~~ik~~~~~~~---~~~~~~~~l~~~~~~a~~~g~~---v~~H~ 235 (427)
++.+. +.|.+.+.++..... ....+++.+.++.+.++++|+. +.+|.
T Consensus 18 l~~~~-~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~h~ 70 (287)
T 2x7v_A 18 PQDTV-NIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGIDWENAFCHS 70 (287)
T ss_dssp HHHHH-HTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHTCCGGGEEEEC
T ss_pred HHHHH-HcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHcCCCcceeEEec
Confidence 34443 789999988643211 1234678889999999999998 78895
No 184
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=49.10 E-value=1.3e+02 Score=26.69 Aligned_cols=97 Identities=16% Similarity=0.073 Sum_probs=56.4
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecC--ChhhHHHHHHHHHHcCCCCcccccc--cC-CHHHH
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE--NGDAVFEGQKRMIELGITGPEGHAL--SR-PPLLE 268 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e--~~~~~~~~~~~l~~~G~~~~~~~~~--~~-p~~~e 268 (427)
+.|++++-+.-+....+.++.++-.++++.+.+.-..|.+++. +..+..+..+++++.|....-..+. .. |+..+
T Consensus 31 ~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~gViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~ 110 (288)
T 2nuw_A 31 EKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHKLIFQVGSLNLNDVMELVKFSNEMDILGVSSHSPYYFPRLPEKF 110 (288)
T ss_dssp HTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSCEEEECCCSCHHHHHHHHHHHHTSCCSEEEECCCCSSCSCCHHH
T ss_pred HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCeEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHHH
Confidence 6889887554444445678999999999888764222777763 3334444446667777754322111 23 44433
Q ss_pred HHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 269 GEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 269 ~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
... -...++...+.++.+-+..
T Consensus 111 l~~--~f~~va~a~~lPiilYn~P 132 (288)
T 2nuw_A 111 LAK--YYEEIARISSHSLYIYNYP 132 (288)
T ss_dssp HHH--HHHHHHHHCCSCEEEEECH
T ss_pred HHH--HHHHHHHhcCCCEEEEECc
Confidence 322 2333455567888777754
No 185
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=47.74 E-value=1.1e+02 Score=27.52 Aligned_cols=50 Identities=14% Similarity=0.239 Sum_probs=34.3
Q ss_pred HHHHHHHHHHcCCCeEEEEEec-C------CCccCCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 185 SDEMEVMVKEKGINSFKFFMAY-K------GSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 185 ~~~~~~l~~~~g~~~ik~~~~~-~------~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
.++..+.+++-|++.+-+.++. | +.+.++.+.|+++-+ +.++|+..|-.+
T Consensus 155 Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~---~~~vpLVlHGgS 211 (305)
T 1rvg_A 155 PEEARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIAR---LVPAPLVLHGAS 211 (305)
T ss_dssp HHHHHHHHHHHCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHH---HCCSCEEECSCC
T ss_pred HHHHHHHHHHHCCCEEEEecCccccccCCCCCCccCHHHHHHHHH---hcCCCEEEeCCC
Confidence 4566777767899988765542 2 345567777777765 457999999644
No 186
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=47.56 E-value=64 Score=27.96 Aligned_cols=21 Identities=19% Similarity=0.142 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHcCCcE-EEec
Q 014320 215 ELLIEGFKRCKSLGALA-MVHA 235 (427)
Q Consensus 215 ~~l~~~~~~a~~~g~~v-~~H~ 235 (427)
+.+++.++.|++.|.+. .+|.
T Consensus 83 ~~~~~~i~~a~~lG~~~v~~~~ 104 (275)
T 3qc0_A 83 DDNRRAVDEAAELGADCLVLVA 104 (275)
T ss_dssp HHHHHHHHHHHHTTCSCEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEEee
Confidence 46677778888887653 4554
No 187
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=47.53 E-value=1.9e+02 Score=27.54 Aligned_cols=124 Identities=10% Similarity=0.051 Sum_probs=72.0
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEEecC--CCccCC-HHHHHHH---HHHHHH------cCCcEEEecCChhhHHHHHHHH
Q 014320 181 DEVVSDEMEVMVKEKGINSFKFFMAYK--GSFMIN-DELLIEG---FKRCKS------LGALAMVHAENGDAVFEGQKRM 248 (427)
Q Consensus 181 ~~~~~~~~~~l~~~~g~~~ik~~~~~~--~~~~~~-~~~l~~~---~~~a~~------~g~~v~~H~e~~~~~~~~~~~l 248 (427)
.+..++..++++ +.|++.|.+..... |...++ +|+++++ ++..++ .++++++=....+.++.+++.+
T Consensus 211 ~~~al~~A~~mv-~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~vpISIDT~~~~VaeaAL~~~ 289 (442)
T 3mcm_A 211 DNQRKLNLDELI-QSGAEIIDIGAESTKPDAKPISIEEEFNKLNEFLEYFKSQLANLIYKPLVSIDTRKLEVMQKILAKH 289 (442)
T ss_dssp CCHHHHHHHHHH-HHTCSEEEEECCCCCC----CCHHHHHHHHHHHHHHHHHHTTTCSSCCEEEEECCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeCCCHHHHHHHHhhC
Confidence 345667777777 79999988765322 222334 4566664 555554 3889999887777766655433
Q ss_pred HHcCC-CCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCH------------------HHHHHHHHHhhcCC-
Q 014320 249 IELGI-TGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM------------------DAMEEIAKARKAGQ- 308 (427)
Q Consensus 249 ~~~G~-~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~------------------~~~~~i~~~~~~G~- 308 (427)
.-..+ .+.-.- ....+.+.+++++++++.+.|.... .-.+.++.+++.|+
T Consensus 290 aGa~i~INDVsg----------~~d~~m~~v~a~~g~~vVlMh~~G~P~tmq~~~y~dvv~ev~~~l~~~i~~a~~aGI~ 359 (442)
T 3mcm_A 290 HDIIWMINDVEC----------NNIEQKAQLIAKYNKKYVIIHNLGITDRNQYLDKENAIDNVCDYIEQKKQILLKHGIA 359 (442)
T ss_dssp GGGCCEEEECCC----------TTHHHHHHHHHHHTCEEEEECC----------------CTHHHHHHHHHHHHHHHTCC
T ss_pred CCCCEEEEcCCC----------CCChHHHHHHHHhCCeEEEECCCCCCccccccCcccHHHHHHHHHHHHHHHHHHcCCC
Confidence 32333 211110 0123566777888999999997421 01245677788898
Q ss_pred --CEEEecC
Q 014320 309 --RVIGEPV 315 (427)
Q Consensus 309 --~v~~~~~ 315 (427)
++..++.
T Consensus 360 ~~~IilDPG 368 (442)
T 3mcm_A 360 QQNIYFDIG 368 (442)
T ss_dssp GGGEEEECC
T ss_pred HHHEEEeCC
Confidence 3666543
No 188
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=47.47 E-value=84 Score=28.65 Aligned_cols=101 Identities=10% Similarity=0.092 Sum_probs=51.5
Q ss_pred HHHHHcCCceEEe-cCcCCCCCcHHHHHHHHHHHhc---cccce----eceeccccCC--Ch---hhHHHHHHHHHHcCC
Q 014320 131 QAAALAGGTTMHI-DFVIPINGSLTAGFEAYEKKAK---NSCMD----YGFHMAITKW--DE---VVSDEMEVMVKEKGI 197 (427)
Q Consensus 131 ~~~~l~~GvTtv~-d~~~~~~~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~--~~---~~~~~~~~l~~~~g~ 197 (427)
...++..|+|+++ |.. .. +..+.++..++.-. ...+. ++..++..+. .+ ...++..+.+++-|+
T Consensus 91 i~~ai~~GFtSVMiDgS-~~--p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~v~~~~~yTdPeea~~Fv~~Tgv 167 (323)
T 2isw_A 91 VKMAIDLGFSSVMIDAS-HH--PFDENVRITKEVVAYAHARSVSVEAELGTLGGIEEDVQNTVQLTEPQDAKKFVELTGV 167 (323)
T ss_dssp HHHHHHTTCSEEEECCT-TS--CHHHHHHHHHHHHHHHHTTTCEEEEEESCC----------CCCCCHHHHHHHHHHHCC
T ss_pred HHHHHHcCCCeEEecCC-CC--CHHHHHHHHHHHHHHHHHcCCeEEEEeCCccCCccCcccccccCCHHHHHHHHHHHCC
Confidence 6778999999997 432 11 33444443333221 11111 1221111100 00 124566777767899
Q ss_pred CeEEEEEec-CCC------cc--CCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 198 NSFKFFMAY-KGS------FM--INDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 198 ~~ik~~~~~-~~~------~~--~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
+.+-+.++. ||. +. ++.+.|+++-+ +.++|+..|-.+
T Consensus 168 D~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~---~~~vpLVlHGgS 213 (323)
T 2isw_A 168 DALAVAIGTSHGAYKFKSESDIRLAIDRVKTISD---LTGIPLVMHGSS 213 (323)
T ss_dssp SEEEECSSCCSSSBCCCC----CCCCHHHHHHHH---HHCSCEEECSCC
T ss_pred CEEEEecCccccccCCCCCcccccCHHHHHHHHH---HhCCCeEEECCC
Confidence 988765542 343 33 55566666644 348999999533
No 189
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=46.87 E-value=11 Score=32.62 Aligned_cols=34 Identities=24% Similarity=0.313 Sum_probs=23.8
Q ss_pred ccccccccccCcCCCCChhhHHHHHHHHHcCCceEEe
Q 014320 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (427)
Q Consensus 107 ~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~ 143 (427)
++|.|+|...+..+..+++.+ .+.|.+.|++.+.
T Consensus 3 ~~DlH~Ht~~Sd~g~~~~~e~---v~~A~~~Gl~~ia 36 (245)
T 1m65_A 3 PVDLHMHTVASTHAYSTLSDY---IAQAKQKGIKLFA 36 (245)
T ss_dssp CEECCBCCTTSTTCCCCHHHH---HHHHHHHTCCEEE
T ss_pred ceEeCcCCCCCCCCCCcHHHH---HHHHHHCCCCEEE
Confidence 689999987653334455544 6777888998765
No 190
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=46.23 E-value=1e+02 Score=27.85 Aligned_cols=50 Identities=20% Similarity=0.177 Sum_probs=34.0
Q ss_pred HHHHHHHHHHcCCCeEEEEEec-CC------CccCCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 185 SDEMEVMVKEKGINSFKFFMAY-KG------SFMINDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 185 ~~~~~~l~~~~g~~~ik~~~~~-~~------~~~~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
.++..+.+++-|++.+-+.++. || .+.++.+.|+++- +.-++|+..|-.+
T Consensus 157 Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~---~~~~~PLVlHGgS 213 (307)
T 3n9r_A 157 PKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVK---RLTNIPLVLHGAS 213 (307)
T ss_dssp HHHHHHHHHHHCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHH---HHHCSCEEESSCC
T ss_pred HHHHHHHHHHHCCCEEEEecCCcccccCCCCCCccCHHHHHHHH---hcCCCCeEEeCCC
Confidence 4566677767899988765542 33 3567888888882 2347999999543
No 191
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=45.92 E-value=93 Score=27.88 Aligned_cols=56 Identities=11% Similarity=0.004 Sum_probs=36.1
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc--CCcEEEecCChh
Q 014320 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL--GALAMVHAENGD 239 (427)
Q Consensus 181 ~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~--g~~v~~H~e~~~ 239 (427)
+.+.+.++.+.+.+.|++.+.+. +..| ..+++.+.++++..++. ++++.+|+.++.
T Consensus 154 ~~~~~~~~~~~~~~~Ga~~i~l~-DT~G--~~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~ 211 (298)
T 2cw6_A 154 SPAKVAEVTKKFYSMGCYEISLG-DTIG--VGTPGIMKDMLSAVMQEVPLAALAVHCHDTY 211 (298)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEE-ETTS--CCCHHHHHHHHHHHHHHSCGGGEEEEEBCTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEec-CCCC--CcCHHHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 33444444444447899887664 3333 35788888888877654 478888887654
No 192
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=45.73 E-value=1.6e+02 Score=26.11 Aligned_cols=113 Identities=12% Similarity=-0.080 Sum_probs=61.1
Q ss_pred HHHHHHHHcCCCeEEEEEec--CC-CccCCH-----HHHHHHHHHHHHcCCcE-EEecCChhhHHHHHHHHHHcCCCCcc
Q 014320 187 EMEVMVKEKGINSFKFFMAY--KG-SFMIND-----ELLIEGFKRCKSLGALA-MVHAENGDAVFEGQKRMIELGITGPE 257 (427)
Q Consensus 187 ~~~~l~~~~g~~~ik~~~~~--~~-~~~~~~-----~~l~~~~~~a~~~g~~v-~~H~e~~~~~~~~~~~l~~~G~~~~~ 257 (427)
+.-+.+++.|.+.+.++... .+ .....+ +...++.+..+++|+.+ .+|....-. -..+
T Consensus 40 ~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~~~~~~~~~~------------~~~~- 106 (305)
T 3obe_A 40 NGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDAGLRISSSHLTPSLR------------EYTK- 106 (305)
T ss_dssp HHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHTTCEEEEEBCCCSCC------------CCCG-
T ss_pred HHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHCCCeEEEeecccccc------------ccch-
Confidence 33333337899999887531 11 011222 25666777778889886 467532100 0000
Q ss_pred cccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCC----HHH-------H-HHHHHHhhcCCCEEEecCcc
Q 014320 258 GHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS----MDA-------M-EEIAKARKAGQRVIGEPVVS 317 (427)
Q Consensus 258 ~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~----~~~-------~-~~i~~~~~~G~~v~~~~~p~ 317 (427)
.......+.+++.++.+...|++..+++... .+. + +..+.+++.|+.+..+..+.
T Consensus 107 -----~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~ 173 (305)
T 3obe_A 107 -----ENMPKFDEFWKKATDIHAELGVSCMVQPSLPRIENEDDAKVVSEIFNRAGEITKKAGILWGYHNHSN 173 (305)
T ss_dssp -----GGHHHHHHHHHHHHHHHHHHTCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCEEEEECCSG
T ss_pred -----hhHHHHHHHHHHHHHHHHHcCCCEEEeCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCEEEEecCcc
Confidence 0001123567788889999999877766421 111 1 22344567899888877653
No 193
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=45.35 E-value=1.7e+02 Score=26.24 Aligned_cols=110 Identities=9% Similarity=-0.080 Sum_probs=60.4
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 192 (427)
+..+.+.+....+..+..||..+.-.+..+.. +.. +.++...+.. .+..+-.+. + .....+.++..+...
T Consensus 31 g~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv--g-~~~t~~ai~la~~a~ 107 (304)
T 3l21_A 31 GSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGA--G-TYDTAHSIRLAKACA 107 (304)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC--C-CSCHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeC--C-CCCHHHHHHHHHHHH
Confidence 44567777777888899999999877654432 222 2333333322 222222221 1 122344444444444
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHHHH-HHHHHcCCcEEEec
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+..-+ ....+++.+.+-+ +.|...++|+.+..
T Consensus 108 -~~Gadavlv~~P~--y~~~s~~~l~~~f~~va~a~~lPiilYn 148 (304)
T 3l21_A 108 -AEGAHGLLVVTPY--YSKPPQRGLQAHFTAVADATELPMLLYD 148 (304)
T ss_dssp -HHTCSEEEEECCC--SSCCCHHHHHHHHHHHHTSCSSCEEEEE
T ss_pred -HcCCCEEEECCCC--CCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 6899987554322 2234666665544 45566799999873
No 194
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=44.76 E-value=57 Score=28.32 Aligned_cols=88 Identities=14% Similarity=0.024 Sum_probs=43.9
Q ss_pred hHHHHHHHHHHcCCCeEEEEEecCCCccCC-------HHHHHHHHHHHHHcCCcEE-EecCChh---hHHHHHHHHHHcC
Q 014320 184 VSDEMEVMVKEKGINSFKFFMAYKGSFMIN-------DELLIEGFKRCKSLGALAM-VHAENGD---AVFEGQKRMIELG 252 (427)
Q Consensus 184 ~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~-------~~~l~~~~~~a~~~g~~v~-~H~e~~~---~~~~~~~~l~~~G 252 (427)
..+++++++++.|.....+.... .....+ .+.+++.++.|++.|.+.. +|..... ......+.
T Consensus 47 ~~~~~~~~l~~~gl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~----- 120 (278)
T 1i60_A 47 SLDDLAEYFQTHHIKPLALNALV-FFNNRDEKGHNEIITEFKGMMETCKTLGVKYVVAVPLVTEQKIVKEEIKKS----- 120 (278)
T ss_dssp CHHHHHHHHHTSSCEEEEEEEEE-CCSSCCHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCBCSSCCCHHHHHHH-----
T ss_pred CHHHHHHHHHHcCCCeeeecccc-ccccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHH-----
Confidence 45566766656666533222211 011012 3467778888888887643 4542110 00111111
Q ss_pred CCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCC
Q 014320 253 ITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM 292 (427)
Q Consensus 253 ~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~ 292 (427)
-.+.+.+..+.+++.|+++.+....
T Consensus 121 ---------------~~~~l~~l~~~a~~~gv~l~lEn~~ 145 (278)
T 1i60_A 121 ---------------SVDVLTELSDIAEPYGVKIALEFVG 145 (278)
T ss_dssp ---------------HHHHHHHHHHHHGGGTCEEEEECCC
T ss_pred ---------------HHHHHHHHHHHHHhcCCEEEEEecC
Confidence 1344556666777778877776553
No 195
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=44.04 E-value=1.8e+02 Score=26.23 Aligned_cols=125 Identities=10% Similarity=-0.042 Sum_probs=72.1
Q ss_pred hHHHHHHHHHHcCCCeEEEEEec--CCCccCCHHHHHHHHHHHHH-cCCcEEE-ecCChhhHHHHHHHHHHcCCCC-ccc
Q 014320 184 VSDEMEVMVKEKGINSFKFFMAY--KGSFMINDELLIEGFKRCKS-LGALAMV-HAENGDAVFEGQKRMIELGITG-PEG 258 (427)
Q Consensus 184 ~~~~~~~l~~~~g~~~ik~~~~~--~~~~~~~~~~l~~~~~~a~~-~g~~v~~-H~e~~~~~~~~~~~l~~~G~~~-~~~ 258 (427)
..+..++++ +.|++.|-+.... .+....+.++..++++..++ .++++.+ =..+.+.-....+...+.|... +-.
T Consensus 76 ~~~~A~~~v-~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~~vplsI~DT~~~~~~~~V~eaal~aga~~k~iI 154 (310)
T 2h9a_B 76 PVAWAKKCV-EYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAIDVPLMIIGCGVEEKDAEIFPVIGEALSGRNCLL 154 (310)
T ss_dssp HHHHHHHHH-HTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHHHHHHTTTSCCEE
T ss_pred HHHHHHHHH-HcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhCCceEEEECCCCCCCCHHHHHHHHHhCCCCCCEE
Confidence 344455566 7899988887643 22234566666666666654 4999999 6644444334444444444321 000
Q ss_pred ccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCH-HHHHHHHHHhhcCC---CEEEecC
Q 014320 259 HALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM-DAMEEIAKARKAGQ---RVIGEPV 315 (427)
Q Consensus 259 ~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~-~~~~~i~~~~~~G~---~v~~~~~ 315 (427)
+..+- ....+.+.++.++|+++.+.|.... ...+.++.+.+.|+ ++..++.
T Consensus 155 Ndvs~------~~~~~~~~~aa~~g~~vv~m~~~dv~~l~~~~~~a~~~Gi~~e~IilDPg 209 (310)
T 2h9a_B 155 SSATK------DNYKPIVATCMVHGHSVVASAPLDINLSKQLNIMIMEMNLAPNRIIMDPL 209 (310)
T ss_dssp EEECT------TTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHHTTTCCGGGEEEECC
T ss_pred EECCC------CccHHHHHHHHHhCCCEEEEChhHHHHHHHHHHHHHHCCCChhhEEEeCC
Confidence 00010 0134566778889999999997433 23355677788887 3555443
No 196
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=42.98 E-value=86 Score=28.07 Aligned_cols=101 Identities=13% Similarity=-0.040 Sum_probs=52.3
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHcCCCe
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINS 199 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 199 (427)
...+.+++......+..+|+-+++-.. .......+.+.....+...-.+|+.+.. ..+....+.++.+ +.|++-
T Consensus 69 p~~T~~dI~~lc~eA~~~g~aaVCV~P----~~V~~a~~~L~~s~V~V~tVigFP~G~~-~~~~Kv~Ea~~Ai-~~GAdE 142 (288)
T 3oa3_A 69 LSATGSQIDVLCAEAKEYGFATVCVRP----DYVSRAVQYLQGTQVGVTCVIGFHEGTY-STDQKVSEAKRAM-QNGASE 142 (288)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEECG----GGHHHHHHHTTTSSCEEEEEESTTTSCS-CHHHHHHHHHHHH-HTTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEECH----HHHHHHHHHcCCCCCeEEEEeCCCCCCC-cHHHHHHHHHHHH-HcCCCE
Confidence 346788888888999999999998431 1122221222111111111122222211 2233456677777 789999
Q ss_pred EEEEEecCCCccCC----HHHHHHHHHHHHH
Q 014320 200 FKFFMAYKGSFMIN----DELLIEGFKRCKS 226 (427)
Q Consensus 200 ik~~~~~~~~~~~~----~~~l~~~~~~a~~ 226 (427)
|.+.++......-+ .+++.++.+.+++
T Consensus 143 IDmVINig~lk~g~~~~v~~eI~~V~~a~~~ 173 (288)
T 3oa3_A 143 LDMVMNYPWLSEKRYTDVFQDIRAVRLAAKD 173 (288)
T ss_dssp EEEECCHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred EEEEeehhhhcCCcHHHHHHHHHHHHHHhcC
Confidence 98877643111112 3455555555544
No 197
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=42.25 E-value=1.7e+02 Score=25.49 Aligned_cols=47 Identities=11% Similarity=0.008 Sum_probs=31.8
Q ss_pred HHHHHHHHcCCCeEEEEEecCC----CccCCHHHHHHHHHHHHHcCCcEEE
Q 014320 187 EMEVMVKEKGINSFKFFMAYKG----SFMINDELLIEGFKRCKSLGALAMV 233 (427)
Q Consensus 187 ~~~~l~~~~g~~~ik~~~~~~~----~~~~~~~~l~~~~~~a~~~g~~v~~ 233 (427)
+..+.+++.|.+.+.+...... ....+++.+.++.+.++++|+.+..
T Consensus 34 ~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 84 (295)
T 3cqj_A 34 ERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPS 84 (295)
T ss_dssp HHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEEE
T ss_pred HHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEEE
Confidence 3333334789999988654211 1234678888999999999998863
No 198
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=42.09 E-value=1.7e+02 Score=25.42 Aligned_cols=22 Identities=14% Similarity=0.203 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHhcCCCEEEEcC
Q 014320 270 EATTRAIRLAEFVNTPLYVVHV 291 (427)
Q Consensus 270 ~a~~~~~~~~~~~g~~~~i~H~ 291 (427)
+.+.+..+.+++.|+++.+...
T Consensus 132 ~~l~~l~~~a~~~Gv~l~lEn~ 153 (294)
T 3vni_A 132 ESVREVAKVAEACGVDFCLEVL 153 (294)
T ss_dssp HHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHcCCEEEEEec
Confidence 4455666777778888777755
No 199
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=41.92 E-value=1.9e+02 Score=25.80 Aligned_cols=110 Identities=13% Similarity=-0.007 Sum_probs=61.0
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 192 (427)
+..+.+.+....+..+..|+..+.-.+..+.. +.. +.++...+.. .+..+-.+. + .....+.++..+...
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv--g-~~~t~~ai~la~~a~ 99 (297)
T 3flu_A 23 GSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGT--G-ANNTVEAIALSQAAE 99 (297)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC--C-CSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeC--C-CcCHHHHHHHHHHHH
Confidence 45667777777788899999999876654432 222 2333333332 222222211 1 122344444444444
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHHH-HHHHHHcCCcEEEec
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIEG-FKRCKSLGALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~-~~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+..-+ ....+++.+.+- -+.|...++|+.+..
T Consensus 100 -~~Gadavlv~~P~--y~~~~~~~l~~~f~~va~a~~lPiilYn 140 (297)
T 3flu_A 100 -KAGADYTLSVVPY--YNKPSQEGIYQHFKTIAEATSIPMIIYN 140 (297)
T ss_dssp -HTTCSEEEEECCC--SSCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred -HcCCCEEEECCCC--CCCCCHHHHHHHHHHHHHhCCCCEEEEE
Confidence 7899987554322 223466655554 455666799999873
No 200
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=41.86 E-value=1.8e+02 Score=25.62 Aligned_cols=46 Identities=15% Similarity=0.046 Sum_probs=32.3
Q ss_pred HHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec
Q 014320 187 EMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA 235 (427)
Q Consensus 187 ~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~ 235 (427)
+++.+. +.|.+++.+..... ....++.+.++.+.++++|+.+..|.
T Consensus 41 ~l~~~~-~~G~~~vEl~~~~~--~~~~~~~~~~l~~~l~~~gl~i~~~~ 86 (309)
T 2hk0_A 41 YIEKVA-KLGFDIIEVAAHHI--NEYSDAELATIRKSAKDNGIILTAGI 86 (309)
T ss_dssp HHHHHH-HTTCSEEEEEHHHH--TTSCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHH-HhCCCEEEeccCCc--cccchhhHHHHHHHHHHcCCeEEEec
Confidence 344444 78999998875421 11234778888888999999999985
No 201
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=41.55 E-value=1.9e+02 Score=26.13 Aligned_cols=109 Identities=9% Similarity=-0.033 Sum_probs=61.2
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 192 (427)
+..+.+.+....+..+..||..+.-.+.++.. +.. +.++...+.. .+..+-.+. + ....+.++..+...
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGv--g--~~t~~ai~la~~A~ 103 (316)
T 3e96_A 28 GSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGI--G--YATSTAIELGNAAK 103 (316)
T ss_dssp CCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE--C--SSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEe--C--cCHHHHHHHHHHHH
Confidence 45667777777888899999999876644332 222 2333333332 233322222 2 23444555444444
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHHH-HHHHHHcCCcEEEec
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIEG-FKRCKSLGALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~-~~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+.. |. ....+++.+.+- -+.|...++|+.+..
T Consensus 104 -~~Gadavlv~~-P~-y~~~s~~~l~~~f~~va~a~~lPiilYn 144 (316)
T 3e96_A 104 -AAGADAVMIHM-PI-HPYVTAGGVYAYFRDIIEALDFPSLVYF 144 (316)
T ss_dssp -HHTCSEEEECC-CC-CSCCCHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred -hcCCCEEEEcC-CC-CCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 68999875532 21 223466665554 445566789998874
No 202
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=41.10 E-value=1.9e+02 Score=25.64 Aligned_cols=110 Identities=10% Similarity=-0.013 Sum_probs=60.3
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 192 (427)
+..+.+.+....+..+..|+..+.-.+..+.. +.. +.++...+.. .+..+-.+. + .....+.++..+...
T Consensus 17 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv--g-~~~t~~ai~la~~a~ 93 (291)
T 3tak_A 17 GGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGT--G-ANSTREAIELTKAAK 93 (291)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC--C-CSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeC--C-CCCHHHHHHHHHHHH
Confidence 45567777777788899999999876654432 222 2333333332 222222211 1 122344444444444
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHH-HHHHHHHcCCcEEEec
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+..-+ ....+++.+.+ .-+.|...++|+.+..
T Consensus 94 -~~Gadavlv~~P~--y~~~~~~~l~~~f~~ia~a~~lPiilYn 134 (291)
T 3tak_A 94 -DLGADAALLVTPY--YNKPTQEGLYQHYKAIAEAVELPLILYN 134 (291)
T ss_dssp -HHTCSEEEEECCC--SSCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred -hcCCCEEEEcCCC--CCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 7899987554322 22346665554 4455666799999883
No 203
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=40.58 E-value=72 Score=28.49 Aligned_cols=42 Identities=19% Similarity=0.251 Sum_probs=27.9
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcC
Q 014320 264 PPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAG 307 (427)
Q Consensus 264 p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G 307 (427)
+.........+.++++.+.+.++ +.|+..... +.++.+++.+
T Consensus 108 ~~~~Q~~~F~~ql~lA~e~~lPv-~iH~r~a~~-~~l~il~~~~ 149 (287)
T 3rcm_A 108 PRPLQEKALEAQLTLAAQLRLPV-FLHERDASE-RLLAILKDYR 149 (287)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCE-EEEEESCHH-HHHHHHHTTG
T ss_pred cHHHHHHHHHHHHHHHHHhCCCE-EEEcCCcHH-HHHHHHHHcC
Confidence 44445667788999999999887 677655432 4555555543
No 204
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=40.52 E-value=2.1e+02 Score=25.85 Aligned_cols=110 Identities=10% Similarity=-0.024 Sum_probs=60.6
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 192 (427)
+..+.+.+....+..+..||..+.-.+.++.. +.. +.++...+.. .+..+-.+. + .....+.++..+...
T Consensus 38 g~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv--g-~~st~~ai~la~~A~ 114 (315)
T 3si9_A 38 GAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGA--G-SNSTSEAVELAKHAE 114 (315)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC--C-CSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeC--C-CCCHHHHHHHHHHHH
Confidence 44566777777788899999999877654432 222 2333333332 222222221 1 122344444444444
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHH-HHHHHHHcCCcEEEec
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+..-+ ....+++.+.+ ..+.|...++|+.+..
T Consensus 115 -~~Gadavlv~~P~--y~~~~~~~l~~~f~~va~a~~lPiilYn 155 (315)
T 3si9_A 115 -KAGADAVLVVTPY--YNRPNQRGLYTHFSSIAKAISIPIIIYN 155 (315)
T ss_dssp -HTTCSEEEEECCC--SSCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred -hcCCCEEEECCCC--CCCCCHHHHHHHHHHHHHcCCCCEEEEe
Confidence 7899987554322 22346665555 4455666799999884
No 205
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=40.51 E-value=96 Score=28.64 Aligned_cols=33 Identities=15% Similarity=0.033 Sum_probs=27.0
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEecCChhhHHHH
Q 014320 212 INDELLIEGFKRCKSLGALAMVHAENGDAVFEG 244 (427)
Q Consensus 212 ~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~ 244 (427)
++.+.++.+.+.+++.|+++..-+-+.+.++..
T Consensus 75 l~~e~~~~L~~~~~~~Gi~~~st~fD~~svd~l 107 (350)
T 3g8r_A 75 LQPEQMQKLVAEMKANGFKAICTPFDEESVDLI 107 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEeccCCHHHHHHH
Confidence 678889999999999999999888887766433
No 206
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=40.41 E-value=1.7e+02 Score=24.94 Aligned_cols=44 Identities=14% Similarity=-0.115 Sum_probs=24.8
Q ss_pred HHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecC
Q 014320 185 SDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE 236 (427)
Q Consensus 185 ~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e 236 (427)
++..-++....|+..+.+.. ..+.++++.+.|+++|+.+.+|..
T Consensus 93 ~~~~i~~A~~lGa~~v~~~~--------~~~~~~~l~~~a~~~gv~l~~En~ 136 (262)
T 3p6l_A 93 WEKMFKFAKAMDLEFITCEP--------ALSDWDLVEKLSKQYNIKISVHNH 136 (262)
T ss_dssp HHHHHHHHHHTTCSEEEECC--------CGGGHHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHHHcCCCEEEecC--------CHHHHHHHHHHHHHhCCEEEEEeC
Confidence 33333333356666655421 134566777777777777777753
No 207
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=40.26 E-value=41 Score=28.86 Aligned_cols=106 Identities=10% Similarity=0.017 Sum_probs=56.0
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccce--eceeccccCCChhhHHHHHHHHHHcCC
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMD--YGFHMAITKWDEVVSDEMEVMVKEKGI 197 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~g~ 197 (427)
...+.+++......+..+|+-+++-.. .......+.+. +....+. .+|+.+. ...+....+.++.+ +.|+
T Consensus 14 p~~t~~~i~~l~~~a~~~~~~aVcv~p----~~v~~~~~~l~--~~~v~v~~vigFP~G~-~~~~~k~~e~~~Ai-~~GA 85 (220)
T 1ub3_A 14 PTATLEEVAKAAEEALEYGFYGLCIPP----SYVAWVRARYP--HAPFRLVTVVGFPLGY-QEKEVKALEAALAC-ARGA 85 (220)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEECCG----GGHHHHHHHCT--TCSSEEEEEESTTTCC-SCHHHHHHHHHHHH-HTTC
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEECH----HHHHHHHHHhC--CCCceEEEEecCCCCC-CchHHHHHHHHHHH-HcCC
Confidence 345788888888999999999998321 11221112111 1111111 1222211 12233456677777 7999
Q ss_pred CeEEEEEecCC----CccCCHHHHHHHHHHHHHcCCcEEE
Q 014320 198 NSFKFFMAYKG----SFMINDELLIEGFKRCKSLGALAMV 233 (427)
Q Consensus 198 ~~ik~~~~~~~----~~~~~~~~l~~~~~~a~~~g~~v~~ 233 (427)
+.+.+.+.... ....-.+++.++.+.+++..+++.+
T Consensus 86 devd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIl 125 (220)
T 1ub3_A 86 DEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVIL 125 (220)
T ss_dssp SEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEEC
T ss_pred CEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEE
Confidence 99988776431 1111234566666666554444433
No 208
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=39.54 E-value=2e+02 Score=25.46 Aligned_cols=111 Identities=11% Similarity=0.003 Sum_probs=59.8
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVK 193 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 193 (427)
+..+.+.+....+..+..|+..+.-.+.++.. +.. +.++...+... ..+.+-...+ ...+.+.++..+...
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaGvg-~~~t~~ai~la~~a~- 92 (289)
T 2yxg_A 16 KEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVN-GRVQVIAGAG-SNCTEEAIELSVFAE- 92 (289)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEECC-CSSHHHHHHHHHHHH-
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEeCC-CCCHHHHHHHHHHHH-
Confidence 34566777777788899999998876654332 222 22333333222 1222211111 112344444444443
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHH-HHHHHcCCcEEEec
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHA 235 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+..-+ ....+++.+.+-+ +.|+..++|+.+..
T Consensus 93 ~~Gadavlv~~P~--y~~~s~~~l~~~f~~ia~a~~lPiilYn 133 (289)
T 2yxg_A 93 DVGADAVLSITPY--YNKPTQEGLRKHFGKVAESINLPIVLYN 133 (289)
T ss_dssp HHTCSEEEEECCC--SSCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred hcCCCEEEECCCC--CCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 6899987554321 2234666665544 45667799998873
No 209
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=39.36 E-value=1.9e+02 Score=25.10 Aligned_cols=21 Identities=14% Similarity=0.243 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHcCCc-EEEec
Q 014320 215 ELLIEGFKRCKSLGAL-AMVHA 235 (427)
Q Consensus 215 ~~l~~~~~~a~~~g~~-v~~H~ 235 (427)
+.+++.++.|++.|.+ +.+|.
T Consensus 104 ~~~~~~i~~a~~lGa~~v~~~~ 125 (287)
T 3kws_A 104 DTMKEIIAAAGELGSTGVIIVP 125 (287)
T ss_dssp HHHHHHHHHHHHTTCSEEEECS
T ss_pred HHHHHHHHHHHHcCCCEEEEec
Confidence 5677888999999986 45664
No 210
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=38.94 E-value=2.2e+02 Score=25.66 Aligned_cols=110 Identities=9% Similarity=-0.017 Sum_probs=60.2
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 192 (427)
+..+.+.+....+..+..||..+.-.+..+.. +.. +.++...+.. .+..+-.+. + .....+.++..+...
T Consensus 39 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv--g-~~st~eai~la~~A~ 115 (314)
T 3qze_A 39 GRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGT--G-ANSTREAVALTEAAK 115 (314)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC--C-CSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC--C-CcCHHHHHHHHHHHH
Confidence 44566777777777889999998876644332 222 2333333332 222222211 1 122344454444444
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHH-HHHHHHHcCCcEEEec
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+..-+ ....+++.+.+ ..+.|...++|+.+..
T Consensus 116 -~~Gadavlv~~P~--y~~~s~~~l~~~f~~va~a~~lPiilYn 156 (314)
T 3qze_A 116 -SGGADACLLVTPY--YNKPTQEGMYQHFRHIAEAVAIPQILYN 156 (314)
T ss_dssp -HTTCSEEEEECCC--SSCCCHHHHHHHHHHHHHHSCSCEEEEE
T ss_pred -HcCCCEEEEcCCC--CCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 7899987654322 22346665555 4455666799999873
No 211
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=38.93 E-value=2.2e+02 Score=25.67 Aligned_cols=110 Identities=9% Similarity=0.009 Sum_probs=60.3
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 192 (427)
+..+.+.+....+..+..|+..+.-.+.++.. +.. +.++...+.. .+..+-.+. + .....+.++..+...
T Consensus 40 g~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGv--g-~~~t~~ai~la~~A~ 116 (315)
T 3na8_A 40 GGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSV--S-DLTTAKTVRRAQFAE 116 (315)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC--C-CSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec--C-CCCHHHHHHHHHHHH
Confidence 44566777777788899999999876644332 222 2333333332 222222221 1 122344444444444
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHH-HHHHHHHcCCcEEEec
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+..-+ ....+++.+.+ ..+.|+..++|+.+..
T Consensus 117 -~~Gadavlv~~P~--y~~~s~~~l~~~f~~va~a~~lPiilYn 157 (315)
T 3na8_A 117 -SLGAEAVMVLPIS--YWKLNEAEVFQHYRAVGEAIGVPVMLYN 157 (315)
T ss_dssp -HTTCSEEEECCCC--SSCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred -hcCCCEEEECCCC--CCCCCHHHHHHHHHHHHHhCCCcEEEEe
Confidence 7899987553221 22346665555 4455666799999874
No 212
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=38.91 E-value=2.1e+02 Score=25.49 Aligned_cols=110 Identities=8% Similarity=-0.075 Sum_probs=59.4
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 192 (427)
+..+.+.+....+..+..|+..+.-.+.++.. +.. +.++...+.. .+..+-.+. + ...+.+.++..+...
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv--g-~~~t~~ai~la~~A~ 92 (297)
T 2rfg_A 16 GQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGA--G-SNNPVEAVRYAQHAQ 92 (297)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC--C-CSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcc--C-CCCHHHHHHHHHHHH
Confidence 34556667777777899999999876544332 222 2333333332 222222221 1 112344444444443
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHHHH-HHHHHcCCcEEEec
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+.. +.....+++.+.+-+ +.|...++|+.+..
T Consensus 93 -~~Gadavlv~~--P~y~~~s~~~l~~~f~~va~a~~lPiilYn 133 (297)
T 2rfg_A 93 -QAGADAVLCVA--GYYNRPSQEGLYQHFKMVHDAIDIPIIVYN 133 (297)
T ss_dssp -HHTCSEEEECC--CTTTCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred -hcCCCEEEEcC--CCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 68999875532 212234666665544 45667799998873
No 213
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=38.79 E-value=2.3e+02 Score=25.90 Aligned_cols=110 Identities=10% Similarity=-0.036 Sum_probs=60.2
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHhc-cccceeceeccccCCChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~ 192 (427)
+..+.+.+....+..+..||..+.-.+..+.. +.. +.++...+... +..+-.+. + ...+.+.++..+...
T Consensus 47 g~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv--g-~~st~eai~la~~A~ 123 (343)
T 2v9d_A 47 GQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGT--G-GTNARETIELSQHAQ 123 (343)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC--C-SSCHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec--C-CCCHHHHHHHHHHHH
Confidence 45667777777788899999998876544332 222 23333333322 22222211 1 122344444444443
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHHHH-HHHHHcCCcEEEec
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+..-+ ....+++.+.+-+ +.|...++|+.+..
T Consensus 124 -~~Gadavlv~~P~--Y~~~s~~~l~~~f~~VA~a~~lPiilYn 164 (343)
T 2v9d_A 124 -QAGADGIVVINPY--YWKVSEANLIRYFEQVADSVTLPVMLYN 164 (343)
T ss_dssp -HHTCSEEEEECCS--SSCCCHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred -hcCCCEEEECCCC--CCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 7899987554322 2234666666544 45666789998873
No 214
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=38.72 E-value=2.1e+02 Score=25.40 Aligned_cols=110 Identities=9% Similarity=-0.121 Sum_probs=59.4
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 192 (427)
+..+.+.+....+..+..|+..+.-.+.++.. +.. +.++...+.. .+..+-.+. + ...+.+.++..+...
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv--g-~~~t~~ai~la~~A~ 92 (292)
T 2vc6_A 16 DRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGA--G-SNSTAEAIAFVRHAQ 92 (292)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEEC--C-CSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec--C-CccHHHHHHHHHHHH
Confidence 34566677777778899999999876544332 222 2333333332 222222221 1 112344444444443
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHHHH-HHHHHcCCcEEEec
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+.. | .....+++.+.+-+ +.|+..++|+.+..
T Consensus 93 -~~Gadavlv~~-P-~y~~~s~~~l~~~f~~ia~a~~lPiilYn 133 (292)
T 2vc6_A 93 -NAGADGVLIVS-P-YYNKPTQEGIYQHFKAIDAASTIPIIVYN 133 (292)
T ss_dssp -HTTCSEEEEEC-C-CSSCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred -HcCCCEEEEcC-C-CCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 78999875533 2 12234666665544 45667799999873
No 215
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=38.68 E-value=24 Score=19.48 Aligned_cols=20 Identities=15% Similarity=-0.046 Sum_probs=17.6
Q ss_pred CHHHHHHHHHHHHHcCCcEE
Q 014320 213 NDELLIEGFKRCKSLGALAM 232 (427)
Q Consensus 213 ~~~~l~~~~~~a~~~g~~v~ 232 (427)
++++++.+.++|++.++.+.
T Consensus 13 tpeelkklkeeakkanirvt 32 (36)
T 2ki0_A 13 TPEELKKLKEEAKKANIRVT 32 (36)
T ss_dssp CHHHHHHHHHHHHHHCCCCC
T ss_pred CHHHHHHHHHHHHhccEEEE
Confidence 78999999999999988764
No 216
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=38.33 E-value=2.2e+02 Score=25.99 Aligned_cols=104 Identities=10% Similarity=0.005 Sum_probs=55.8
Q ss_pred HHHHHcCCceEEecCcCCCC-CcHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEecCCC
Q 014320 131 QAAALAGGTTMHIDFVIPIN-GSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMAYKGS 209 (427)
Q Consensus 131 ~~~~l~~GvTtv~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~~~~~ 209 (427)
.+.+...|+..++-...... ....+.++..++.+... .+.+... ...+.+.+.++.+.+...|+..+.+. +..|.
T Consensus 99 i~~a~~aGvd~v~I~~~~s~~~~~~~~i~~ak~~G~~v--~~~~~~a-~~~~~e~~~~ia~~~~~~Ga~~i~l~-DT~G~ 174 (345)
T 1nvm_A 99 LKNAYQAGARVVRVATHCTEADVSKQHIEYARNLGMDT--VGFLMMS-HMIPAEKLAEQGKLMESYGATCIYMA-DSGGA 174 (345)
T ss_dssp HHHHHHHTCCEEEEEEETTCGGGGHHHHHHHHHHTCEE--EEEEEST-TSSCHHHHHHHHHHHHHHTCSEEEEE-CTTCC
T ss_pred HHHHHhCCcCEEEEEEeccHHHHHHHHHHHHHHCCCEE--EEEEEeC-CCCCHHHHHHHHHHHHHCCCCEEEEC-CCcCc
Confidence 45566668877664321111 13444555555544321 1111111 22344445555554446788876542 22222
Q ss_pred ccCCHHHHHHHHHHHHHc---CCcEEEecCChhh
Q 014320 210 FMINDELLIEGFKRCKSL---GALAMVHAENGDA 240 (427)
Q Consensus 210 ~~~~~~~l~~~~~~a~~~---g~~v~~H~e~~~~ 240 (427)
.+++.+.++++..++. ++++.+|+.++..
T Consensus 175 --~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G 206 (345)
T 1nvm_A 175 --MSMNDIRDRMRAFKAVLKPETQVGMHAHHNLS 206 (345)
T ss_dssp --CCHHHHHHHHHHHHHHSCTTSEEEEECBCTTS
T ss_pred --cCHHHHHHHHHHHHHhcCCCceEEEEECCCcc
Confidence 4688888888877654 6899999977653
No 217
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=38.12 E-value=2.2e+02 Score=25.52 Aligned_cols=112 Identities=9% Similarity=-0.003 Sum_probs=61.0
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 192 (427)
|..+.+.+....+..+..||..++-.+.++.. +.. +.++...+.. .+..+-.+. + .....+.++..+...
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv--g-~~~t~~ai~la~~A~ 100 (309)
T 3fkr_A 24 GDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTT--S-HYSTQVCAARSLRAQ 100 (309)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC--C-CSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEec--C-CchHHHHHHHHHHHH
Confidence 45667777777888899999998876654432 222 2333333332 222222221 1 122344444444443
Q ss_pred HHcCCCeEEEEEecCCC-ccCCHHHHHHH-HHHHHHcCCcEEEec
Q 014320 193 KEKGINSFKFFMAYKGS-FMINDELLIEG-FKRCKSLGALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~-~~~~~~~l~~~-~~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+..-+... ...+++.+.+- .+.|+..++|+.+..
T Consensus 101 -~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn 144 (309)
T 3fkr_A 101 -QLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQD 144 (309)
T ss_dssp -HTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred -HcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 7899987553211110 23466666554 455666799998873
No 218
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=37.64 E-value=2.3e+02 Score=25.56 Aligned_cols=110 Identities=8% Similarity=-0.094 Sum_probs=59.0
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 192 (427)
+..+.+.+....+..+..||..+.-.+.++.. +.. +.++...+.. .+..+-.+. + .....+.++..+...
T Consensus 27 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv--g-~~~t~~ai~la~~a~ 103 (318)
T 3qfe_A 27 DTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGV--G-AHSTRQVLEHINDAS 103 (318)
T ss_dssp TEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEEC--C-CSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC--C-CCCHHHHHHHHHHHH
Confidence 34566777777788899999998876654332 222 2333333332 222222221 1 122344444444444
Q ss_pred HHcCCCeEEEEEecCCCcc--CCHHHHHH-HHHHHHHcCCcEEEec
Q 014320 193 KEKGINSFKFFMAYKGSFM--INDELLIE-GFKRCKSLGALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~--~~~~~l~~-~~~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+.. |. .+. .+++.+.+ ..+.|...++|+.+..
T Consensus 104 -~~Gadavlv~~-P~-y~~kp~~~~~l~~~f~~ia~a~~lPiilYn 146 (318)
T 3qfe_A 104 -VAGANYVLVLP-PA-YFGKATTPPVIKSFFDDVSCQSPLPVVIYN 146 (318)
T ss_dssp -HHTCSEEEECC-CC-C---CCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred -HcCCCEEEEeC-Cc-ccCCCCCHHHHHHHHHHHHhhCCCCEEEEe
Confidence 68999875532 21 111 35655544 4456667799998873
No 219
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=37.47 E-value=2.1e+02 Score=25.41 Aligned_cols=110 Identities=10% Similarity=-0.077 Sum_probs=58.8
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHhc-cccceeceeccccCCChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~ 192 (427)
+..+.+.+....+..+..|+..+.-.+.++.. +.. +.++...+... +..+-.+. + .....+.++..+...
T Consensus 17 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv--g-~~~t~~ai~la~~a~ 93 (292)
T 2ojp_A 17 GNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGT--G-ANATAEAISLTQRFN 93 (292)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC--C-CSSHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEec--C-CccHHHHHHHHHHHH
Confidence 45567777777778889999998876644332 222 23333333322 22222211 1 112233343333333
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHHHH-HHHHHcCCcEEEec
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+.. | .....+++.+.+-+ +.|+..++|+.+..
T Consensus 94 -~~Gadavlv~~-P-~y~~~s~~~l~~~f~~ia~a~~lPiilYn 134 (292)
T 2ojp_A 94 -DSGIVGCLTVT-P-YYNRPSQEGLYQHFKAIAEHTDLPQILYN 134 (292)
T ss_dssp -TSSCSEEEEEC-C-CSSCCCHHHHHHHHHHHHTTCSSCEEEEC
T ss_pred -hcCCCEEEECC-C-CCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 67898875542 2 22234666666555 45666789999874
No 220
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=37.40 E-value=23 Score=31.86 Aligned_cols=33 Identities=24% Similarity=0.196 Sum_probs=25.7
Q ss_pred ccccccccccCcCCCCChhhHHHHHHHHHcCCceEEe
Q 014320 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (427)
Q Consensus 107 ~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~ 143 (427)
++|.|+|...+ .|..+++++ .+.|.+.|++.+.
T Consensus 3 ~~DLH~Ht~~S-Dg~~~~~el---v~~A~~~Gl~~ia 35 (292)
T 2yb1_A 3 NIDLHFHSRTS-DGALTPTEV---IDRAAARAPALLA 35 (292)
T ss_dssp CEECCBCCTTT-TCSSCHHHH---HHHHHTTCCSEEE
T ss_pred ccccccCCCcc-CCCCCHHHH---HHHHHHCCCCEEE
Confidence 78999998766 466666665 7788899998776
No 221
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=37.23 E-value=2.3e+02 Score=25.33 Aligned_cols=112 Identities=9% Similarity=-0.013 Sum_probs=60.8
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVK 193 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 193 (427)
+..+.+.+....+..+..||..+.-.+.++.. +.. +.++...+......+.+-...+ .....+.++..+...
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg-~~~t~~ai~la~~a~- 100 (301)
T 3m5v_A 23 GKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAG-SNATHEAVGLAKFAK- 100 (301)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECC-CSSHHHHHHHHHHHH-
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCC-CCCHHHHHHHHHHHH-
Confidence 34566777777788899999999877654432 222 2333333332210222222111 122344444444444
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHH-HHHHHHHcCCcEEEec
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHA 235 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+..-+ ....+++.+.+ ..+.|...++|+.+..
T Consensus 101 ~~Gadavlv~~P~--y~~~s~~~l~~~f~~va~a~~lPiilYn 141 (301)
T 3m5v_A 101 EHGADGILSVAPY--YNKPTQQGLYEHYKAIAQSVDIPVLLYN 141 (301)
T ss_dssp HTTCSEEEEECCC--SSCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred HcCCCEEEEcCCC--CCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 7899988654322 22346665555 4455667799999873
No 222
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=37.06 E-value=1.2e+02 Score=27.89 Aligned_cols=120 Identities=11% Similarity=-0.002 Sum_probs=59.1
Q ss_pred hHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCccccccc-
Q 014320 184 VSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHALS- 262 (427)
Q Consensus 184 ~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~~~- 262 (427)
..+.++++. ..|+..|.+..+...+...+.+.+.++++.+++.|+.+.+... ....+..+.+.+.|+........+
T Consensus 104 i~~~~~~~~-~~g~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~~g~~i~~t~G--~l~~e~l~~L~~aGvd~v~i~les~ 180 (369)
T 1r30_A 104 VLESARKAK-AAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEACMTLG--TLSESQAQRLANAGLDYYNHNLDTS 180 (369)
T ss_dssp HHHHHHHHH-HTTCSEEEEEECCSSCCTTTHHHHHHHHHHHHHTTSEEEEECS--SCCHHHHHHHHHHCCCEEECCCBSC
T ss_pred HHHHHHHHH-HcCCcEEEEEeCCCCCCcCCHHHHHHHHHHHHHcCCeEEEecC--CCCHHHHHHHHHCCCCEEeecCcCC
Confidence 334344443 4677665433322113335678888888888888877665432 122344466677776432211111
Q ss_pred -------CCHHHHHHHHHHHHHHHHhcCCC----EEEEcCCCH-HHHHHHHHHhhcC
Q 014320 263 -------RPPLLEGEATTRAIRLAEFVNTP----LYVVHVMSM-DAMEEIAKARKAG 307 (427)
Q Consensus 263 -------~p~~~e~~a~~~~~~~~~~~g~~----~~i~H~~~~-~~~~~i~~~~~~G 307 (427)
++. ...+.+.+.++.+.+.|.+ +.+.+..+. +-.+.++.+++.+
T Consensus 181 ~e~~~~i~~~-~~~~~~l~~i~~a~~~Gi~v~~~~I~Gl~et~ed~~~~l~~l~~l~ 236 (369)
T 1r30_A 181 PEFYGNIITT-RTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLP 236 (369)
T ss_dssp HHHHHHHCCS-SCHHHHHHHHHHHHHHHCEEECCEEECSSCCHHHHHHHHHHHHSSS
T ss_pred HHHHHHhCCC-CCHHHHHHHHHHHHHcCCeeeeeeEeeCCCCHHHHHHHHHHHHhhc
Confidence 110 0123444555555555543 333333333 3345566666655
No 223
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=36.80 E-value=2.6e+02 Score=25.90 Aligned_cols=113 Identities=14% Similarity=0.091 Sum_probs=63.4
Q ss_pred HHHHHHHcCCCeEEEEEecCCCccCC----HHHHHHHHHHHHHcCCcEEEecC-C--hhhHHHHHHHHHHcCCCCccccc
Q 014320 188 MEVMVKEKGINSFKFFMAYKGSFMIN----DELLIEGFKRCKSLGALAMVHAE-N--GDAVFEGQKRMIELGITGPEGHA 260 (427)
Q Consensus 188 ~~~l~~~~g~~~ik~~~~~~~~~~~~----~~~l~~~~~~a~~~g~~v~~H~e-~--~~~~~~~~~~l~~~G~~~~~~~~ 260 (427)
++.+. +.|.+.+.++.....+...+ .+.+.++.+.++++|+.+..|.. . .... ..| ..
T Consensus 39 l~~aa-~~G~d~VEl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GL~i~~~~~~~f~~p~~--------~~g------~l 103 (394)
T 1xla_A 39 VHKLA-ELGAYGITFHDNDLIPFDATEAEREKILGDFNQALKDTGLKVPMVTTNLFSHPVF--------KDG------GF 103 (394)
T ss_dssp HHHHH-HHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHCCBCCEEECCCSSSGGG--------TTC------ST
T ss_pred HHHHH-HcCCCEEEecCCccCcccCCchhhHHHHHHHHHHHHHcCCeEEEEecCccCCccc--------cCC------cc
Confidence 44443 78999998765321111112 45778888889999998876632 1 0000 000 00
Q ss_pred ccCCH----HHHHHHHHHHHHHHHhcCCCEEEEcCCC----------H-H-------HH-HHHHHHhhcC--CCEEEecC
Q 014320 261 LSRPP----LLEGEATTRAIRLAEFVNTPLYVVHVMS----------M-D-------AM-EEIAKARKAG--QRVIGEPV 315 (427)
Q Consensus 261 ~~~p~----~~e~~a~~~~~~~~~~~g~~~~i~H~~~----------~-~-------~~-~~i~~~~~~G--~~v~~~~~ 315 (427)
..|. ....+.+.+.++++...|++..+.|... . + .+ ++.+.+++.| +.+..|..
T Consensus 104 -~~~d~~~r~~~i~~~~~~i~~A~~LGa~~vvv~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~A~~~G~~v~l~lE~~ 182 (394)
T 1xla_A 104 -TSNDRSIRRFALAKVLHNIDLAAEMGAETFVMWGGREGSEYDGSKDLAAALDRMREGVDTAAGYIKDKGYNLRIALEPK 182 (394)
T ss_dssp -TCSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECCTTCEESSGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEECCC
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCccccccccCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 0111 1123567788899999999877776431 1 1 11 1233345678 88888887
Q ss_pred c
Q 014320 316 V 316 (427)
Q Consensus 316 p 316 (427)
|
T Consensus 183 ~ 183 (394)
T 1xla_A 183 P 183 (394)
T ss_dssp S
T ss_pred C
Confidence 6
No 224
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=36.78 E-value=2e+02 Score=24.62 Aligned_cols=21 Identities=24% Similarity=0.207 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHcCCcEE-Eec
Q 014320 215 ELLIEGFKRCKSLGALAM-VHA 235 (427)
Q Consensus 215 ~~l~~~~~~a~~~g~~v~-~H~ 235 (427)
+.+++.++.|++.|.+.. +|.
T Consensus 84 ~~~~~~i~~A~~lGa~~v~~~~ 105 (264)
T 1yx1_A 84 PELEPTLRRAEACGAGWLKVSL 105 (264)
T ss_dssp TTHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEec
Confidence 556777777777776543 453
No 225
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=36.76 E-value=2.3e+02 Score=25.31 Aligned_cols=110 Identities=9% Similarity=-0.067 Sum_probs=59.1
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHhccccceeceeccccC-CChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAKNSCMDYGFHMAITK-WDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ 192 (427)
+..+.+.+....+..+..|+..+.-.+..+.. +.. +.++...+... ..+.+-. +... ...+.++..+...
T Consensus 27 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~-grvpVia--Gvg~~~t~~ai~la~~A~ 103 (303)
T 2wkj_A 27 QALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAK-GKIKLIA--HVGCVSTAESQQLAASAK 103 (303)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEE--ECCCSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhC-CCCcEEE--ecCCCCHHHHHHHHHHHH
Confidence 34566667777777899999999876654332 222 23333333321 1222211 2212 2344444444443
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHHHH-HHHHHcC-CcEEEec
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLG-ALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~a~~~g-~~v~~H~ 235 (427)
+.|++.+-+..-+ ....+++.+.+-+ +.|...+ +|+.+..
T Consensus 104 -~~Gadavlv~~P~--y~~~s~~~l~~~f~~va~a~~~lPiilYn 145 (303)
T 2wkj_A 104 -RYGFDAVSAVTPF--YYPFSFEEHCDHYRAIIDSADGLPMVVYN 145 (303)
T ss_dssp -HHTCSEEEEECCC--SSCCCHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred -hCCCCEEEecCCC--CCCCCHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 6899987554322 2234666666544 4455667 9998874
No 226
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=36.74 E-value=2.3e+02 Score=25.28 Aligned_cols=110 Identities=11% Similarity=0.004 Sum_probs=61.3
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 192 (427)
+..+.+.+....+..+..||..+.-.+.++.. +.. +.++...+.. .+..+-.+. + .....+.++..+...
T Consensus 20 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv--g-~~~t~~ai~la~~a~ 96 (300)
T 3eb2_A 20 GRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGV--A-STSVADAVAQAKLYE 96 (300)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEE--E-ESSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeC--C-CCCHHHHHHHHHHHH
Confidence 44567777777788899999998876544332 222 2333333332 232322221 1 122344455444444
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHHHH-HHHHHcCCcEEEec
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+..-+ ....+++.+.+-+ +.|...++|+.+..
T Consensus 97 -~~Gadavlv~~P~--y~~~~~~~l~~~f~~va~a~~lPiilYn 137 (300)
T 3eb2_A 97 -KLGADGILAILEA--YFPLKDAQIESYFRAIADAVEIPVVIYT 137 (300)
T ss_dssp -HHTCSEEEEEECC--SSCCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred -HcCCCEEEEcCCC--CCCCCHHHHHHHHHHHHHHCCCCEEEEE
Confidence 7899988654322 2224666665544 45667799998874
No 227
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=36.47 E-value=2.4e+02 Score=25.31 Aligned_cols=110 Identities=11% Similarity=-0.052 Sum_probs=59.3
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 192 (427)
+..+.+.+....+..+..|+..+.-.+.++.. +.. +.++...+.. .+..+-.+. + .....+.++..+...
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGv--g-~~st~~ai~la~~A~ 104 (306)
T 1o5k_A 28 GELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGA--G-TNSTEKTLKLVKQAE 104 (306)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC--C-CSCHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcC--C-CccHHHHHHHHHHHH
Confidence 34556667677777899999998876544332 222 2333333332 222222211 1 112344444444443
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHHHH-HHHHHcCCcEEEec
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+..- .....+++.+.+-+ +.|...++|+.+..
T Consensus 105 -~~Gadavlv~~P--~y~~~s~~~l~~~f~~va~a~~lPiilYn 145 (306)
T 1o5k_A 105 -KLGANGVLVVTP--YYNKPTQEGLYQHYKYISERTDLGIVVYN 145 (306)
T ss_dssp -HHTCSEEEEECC--CSSCCCHHHHHHHHHHHHTTCSSCEEEEE
T ss_pred -hcCCCEEEECCC--CCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 689998755432 22234666666554 45666789998874
No 228
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=36.19 E-value=2.3e+02 Score=25.15 Aligned_cols=111 Identities=11% Similarity=-0.006 Sum_probs=60.0
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVK 193 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 193 (427)
+..+.+.+....+..+..|+..+.-.+.++.. +.. +.++...+... ..+.+-...+ .....+.++..+...
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg-~~~t~~ai~la~~A~- 92 (294)
T 2ehh_A 16 GEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAA-GRIKVIAGTG-GNATHEAVHLTAHAK- 92 (294)
T ss_dssp TEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEECC-CSCHHHHHHHHHHHH-
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecC-CCCHHHHHHHHHHHH-
Confidence 34566677777788899999999876654332 222 23333333322 1222211111 112344444444443
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHH-HHHHHcCCcEEEec
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHA 235 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+..-+ ....+++.+.+-+ +.|...++|+.+..
T Consensus 93 ~~Gadavlv~~P~--y~~~s~~~l~~~f~~va~a~~lPiilYn 133 (294)
T 2ehh_A 93 EVGADGALVVVPY--YNKPTQRGLYEHFKTVAQEVDIPIIIYN 133 (294)
T ss_dssp HTTCSEEEEECCC--SSCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred hcCCCEEEECCCC--CCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 7899987554321 2234666665544 45667799998873
No 229
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=36.19 E-value=2.4e+02 Score=25.23 Aligned_cols=110 Identities=14% Similarity=0.028 Sum_probs=59.9
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 192 (427)
+..+.+.+....+..+..|+..+.-.+.++.. +.. +.++...+.. .+..+-.+. + ...+.+.++..+...
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGv--g-~~~t~~ai~la~~A~ 104 (301)
T 1xky_A 28 GNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGT--G-SNNTHASIDLTKKAT 104 (301)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC--C-CSCHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCC--C-CCCHHHHHHHHHHHH
Confidence 44566777777778899999999876654332 222 2333333332 222222221 1 112344444444443
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHHHH-HHHHHcCCcEEEec
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+..-+ ....+++.+.+-+ +.|...++|+.+..
T Consensus 105 -~~Gadavlv~~P~--y~~~s~~~l~~~f~~va~a~~lPiilYn 145 (301)
T 1xky_A 105 -EVGVDAVMLVAPY--YNKPSQEGMYQHFKAIAESTPLPVMLYN 145 (301)
T ss_dssp -HTTCSEEEEECCC--SSCCCHHHHHHHHHHHHHTCSSCEEEEE
T ss_pred -hcCCCEEEEcCCC--CCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 7899987554322 2234666666544 45666789998873
No 230
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=36.11 E-value=2.2e+02 Score=24.80 Aligned_cols=22 Identities=9% Similarity=-0.073 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHhcCCCEEEEcC
Q 014320 270 EATTRAIRLAEFVNTPLYVVHV 291 (427)
Q Consensus 270 ~a~~~~~~~~~~~g~~~~i~H~ 291 (427)
+.+.+..+.+++.|+++.+...
T Consensus 141 ~~l~~l~~~a~~~gv~l~lE~~ 162 (301)
T 3cny_A 141 KGLNHYGEIAAKYGLKVAYHHH 162 (301)
T ss_dssp HHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHcCCEEEEecC
Confidence 4455666677777877766654
No 231
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=36.03 E-value=2.5e+02 Score=25.50 Aligned_cols=110 Identities=10% Similarity=-0.059 Sum_probs=60.2
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cH---HHHHHHHHHHhc-cccceeceeccccCCChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~ 192 (427)
+..+.+.+....+..+..||..+.-.+..+.. +. .+.++...+... +..+-.+. + .....+.++..+...
T Consensus 50 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv--g-~~st~eai~la~~A~ 126 (332)
T 2r8w_A 50 GRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGI--G-ALRTDEAVALAKDAE 126 (332)
T ss_dssp CCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE--C-CSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEec--C-CCCHHHHHHHHHHHH
Confidence 45667777777778889999998876654332 22 223333333322 22222221 1 112344444444443
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHHHH-HHHHHcCCcEEEec
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+.. +.....+++.+.+-+ +.|...++|+.+..
T Consensus 127 -~~Gadavlv~~--P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn 167 (332)
T 2r8w_A 127 -AAGADALLLAP--VSYTPLTQEEAYHHFAAVAGATALPLAIYN 167 (332)
T ss_dssp -HHTCSEEEECC--CCSSCCCHHHHHHHHHHHHHHCSSCEEEEC
T ss_pred -hcCCCEEEECC--CCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 68999875432 222234666665544 45677799999874
No 232
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=35.90 E-value=1.8e+02 Score=26.25 Aligned_cols=105 Identities=10% Similarity=0.017 Sum_probs=59.1
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHH--cCCcEEEecCChhhHHHHHHHHHHcCCCCccc
Q 014320 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS--LGALAMVHAENGDAVFEGQKRMIELGITGPEG 258 (427)
Q Consensus 181 ~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~--~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~ 258 (427)
+-+..+.+-+..++.+...|-- +++........+.+..+++.+.+ .++||.+|.......+. +.+..+.|+.+.=.
T Consensus 26 n~e~~~avi~AAee~~sPvIlq-~s~g~~~y~g~~~~~~~v~~aa~~~~~VPValHLDHg~~~e~-~~~ai~~GFtSVMi 103 (307)
T 3n9r_A 26 NFEMLNAIFEAGNEENSPLFIQ-ASEGAIKYMGIDMAVGMVKIMCERYPHIPVALHLDHGTTFES-CEKAVKAGFTSVMI 103 (307)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEE-EEHHHHHHHCHHHHHHHHHHHHHHSTTSCEEEEEEEECSHHH-HHHHHHHTCSEEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEE-cChhhhhhCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCHHH-HHHHHHhCCCcEEE
Confidence 3455555555554555554421 12211112355677777776655 68999999643322322 24455678754422
Q ss_pred ccccCCHHHHHHHHHHHHHHHHhcCCCEE
Q 014320 259 HALSRPPLLEGEATTRAIRLAEFVNTPLY 287 (427)
Q Consensus 259 ~~~~~p~~~e~~a~~~~~~~~~~~g~~~~ 287 (427)
-.-..|-.-.....++..+++...|+.+-
T Consensus 104 DgS~~p~eeNi~~Tk~vv~~ah~~gvsVE 132 (307)
T 3n9r_A 104 DASHHAFEENLELTSKVVKMAHNAGVSVE 132 (307)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred ECCCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 22235666566777888899988876544
No 233
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=35.63 E-value=88 Score=32.03 Aligned_cols=111 Identities=13% Similarity=0.030 Sum_probs=59.2
Q ss_pred ChhhHHHHHHHHHcCCceEEe----cCcCCC----------------CC-cHHHHHHHHHHHhccccceeceeccccCCC
Q 014320 123 TIDDFFSGQAAALAGGTTMHI----DFVIPI----------------NG-SLTAGFEAYEKKAKNSCMDYGFHMAITKWD 181 (427)
Q Consensus 123 ~~e~~~~~~~~~l~~GvTtv~----d~~~~~----------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (427)
+-+....-...|.+.|+-.++ |.+... +. .+.+.++..++.+-+..+-+...+.... -
T Consensus 369 nte~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sKGV~iilw~~t~~~~~n-~ 447 (738)
T 2d73_A 369 NTANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARKGIKMMMHHETSASVRN-Y 447 (738)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHTTCEEEEEEECTTBHHH-H
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhCCCEEEEEEcCCCchhh-H
Confidence 344444446678889998877 433210 00 2555555555543222221111110000 1
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEe----cCCCc---cCCHHHHHHHHHHHHHcCCcEEEe
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMA----YKGSF---MINDELLIEGFKRCKSLGALAMVH 234 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~----~~~~~---~~~~~~l~~~~~~a~~~g~~v~~H 234 (427)
++.+++.-++.++.|+.+||+-.- +++.. +..-.....+++.|.++++.|..|
T Consensus 448 e~~~d~~f~~~~~~Gv~GVKvdF~g~~~~r~~~h~~Q~~v~~Y~~i~~~AA~~~LmVnfH 507 (738)
T 2d73_A 448 ERHMDKAYQFMADNGYNSVKSGYVGNIIPRGEHHYGQWMNNHYLYAVKKAADYKIMVNAH 507 (738)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCSSCBSTTCCTTSHHHHHHHHHHHHHHHHTTCEEEET
T ss_pred HHHHHHHHHHHHHcCCCEEEeCccccCcCCcccccchHHHHHHHHHHHHHHHcCcEEEcc
Confidence 233443334444799999998432 22211 112345678999999999999999
No 234
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=35.16 E-value=2.5e+02 Score=25.15 Aligned_cols=110 Identities=10% Similarity=-0.018 Sum_probs=60.6
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHhccccceeceeccccC-CChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAKNSCMDYGFHMAITK-WDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ 192 (427)
+..+.+.+....+..+..|+..+.-.+..+.. +.. +.++...+... ..+.+-. +... ...+.++..+...
T Consensus 32 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpvia--Gvg~~st~~ai~la~~A~ 108 (304)
T 3cpr_A 32 GDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVG-DRAKLIA--GVGTNNTRTSVELAEAAA 108 (304)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHT-TTSEEEE--ECCCSCHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEe--cCCCCCHHHHHHHHHHHH
Confidence 45667777777888899999999876654332 222 23333333321 1222211 2222 2344444444443
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHHHH-HHHHHcCCcEEEec
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+..-+ ....+++.+.+-+ +.|...++|+.+..
T Consensus 109 -~~Gadavlv~~P~--y~~~~~~~l~~~f~~ia~a~~lPiilYn 149 (304)
T 3cpr_A 109 -SAGADGLLVVTPY--YSKPSQEGLLAHFGAIAAATEVPICLYD 149 (304)
T ss_dssp -HTTCSEEEEECCC--SSCCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred -hcCCCEEEECCCC--CCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 7899987554322 2234666655544 55677799998863
No 235
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=34.75 E-value=2.1e+02 Score=29.29 Aligned_cols=111 Identities=10% Similarity=-0.006 Sum_probs=56.0
Q ss_pred HHHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhccccceeceec--cc-c--CCChhhHHHHHHHHHHcCCCeEE
Q 014320 128 FSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHM--AI-T--KWDEVVSDEMEVMVKEKGINSFK 201 (427)
Q Consensus 128 ~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~-~--~~~~~~~~~~~~l~~~~g~~~ik 201 (427)
....+.++.+|+..++-+....+. .....++..++.+........... .. . ..+.+...++.+.+.+.|++.|.
T Consensus 200 ~~~i~~a~~~Gvd~irIf~s~n~l~~l~~~i~~ak~~G~~v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l~~~Ga~~I~ 279 (718)
T 3bg3_A 200 FKFCEVAKENGMDVFRVFDSLNYLPNMLLGMEAAGSAGGVVEAAISYTGDVADPSRTKYSLQYYMGLAEELVRAGTHILC 279 (718)
T ss_dssp HHHHHHHHHHTCCEEEEECSSCCHHHHHHHHHHHHTTTSEEEEEEECCSCTTCTTCCTTCHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHhcCcCEEEEEecHHHHHHHHHHHHHHHHcCCeEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 344567777898887644322111 223333333333322111111110 01 1 11334444444333378998765
Q ss_pred EEEecCCCccCCHHHHHHHHHHHHH-c-CCcEEEecCChhhH
Q 014320 202 FFMAYKGSFMINDELLIEGFKRCKS-L-GALAMVHAENGDAV 241 (427)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~a~~-~-g~~v~~H~e~~~~~ 241 (427)
+. +.. ....+..+.++++..++ . ++++.+|+.++...
T Consensus 280 l~-DT~--G~~~P~~v~~lV~~lk~~~p~~~I~~H~Hnd~Gl 318 (718)
T 3bg3_A 280 IK-DMA--GLLKPTACTMLVSSLRDRFPDLPLHIHTHDTSGA 318 (718)
T ss_dssp EE-CTT--SCCCHHHHHHHHHHHHHHSTTCCEEEECCCTTSC
T ss_pred Ec-CcC--CCcCHHHHHHHHHHHHHhCCCCeEEEEECCCccH
Confidence 42 222 23578888888877755 4 78999999776543
No 236
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=34.71 E-value=2.4e+02 Score=24.97 Aligned_cols=111 Identities=8% Similarity=-0.060 Sum_probs=59.8
Q ss_pred CCCChhhHHHHHHHHHc-CCceEEecCcCCCCC---cHH---HHHHHHHHHhccccceeceeccccCCChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALA-GGTTMHIDFVIPING---SLT---AGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~-~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 192 (427)
+..+.+.+....+..+. .|+..+.-.+.++.. +.. +.++...+... ..+.+-...+ .....+.++..+...
T Consensus 19 g~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg-~~~t~~ai~la~~a~ 96 (293)
T 1f6k_A 19 GTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAK-DQIALIAQVG-SVNLKEAVELGKYAT 96 (293)
T ss_dssp SCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEECC-CSCHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEecC-CCCHHHHHHHHHHHH
Confidence 45667777777788899 999998876544332 222 22333333222 1222211111 112344444444443
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHHHH-HHHHHcCCcEEEec
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+..-+ ....+++.+.+-+ +.|+..++|+.+..
T Consensus 97 -~~Gadavlv~~P~--y~~~~~~~l~~~f~~va~a~~lPiilYn 137 (293)
T 1f6k_A 97 -ELGYDCLSAVTPF--YYKFSFPEIKHYYDTIIAETGSNMIVYS 137 (293)
T ss_dssp -HHTCSEEEEECCC--SSCCCHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred -hcCCCEEEECCCC--CCCCCHHHHHHHHHHHHHhCCCCEEEEE
Confidence 6899987554322 2234666655544 45666789998874
No 237
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=34.28 E-value=2.2e+02 Score=25.29 Aligned_cols=108 Identities=9% Similarity=0.003 Sum_probs=58.9
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcCCCCC---cH---HHHHHHHHHHhc-cccceeceeccccCCChhhHHHHHHHHHH
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SL---TAGFEAYEKKAK-NSCMDYGFHMAITKWDEVVSDEMEVMVKE 194 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 194 (427)
.+.+.+....+..+..|+..+.-.+.++.. +. .+.++...+... +..+-.+. + .....+.++..+... +
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gv--g-~~~t~~ai~la~~a~-~ 94 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGT--G-SNNTAASIAMSKWAE-S 94 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC--C-CSSHHHHHHHHHHHH-H
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC--C-cccHHHHHHHHHHHH-h
Confidence 566777777788899999998876544332 22 223333333322 22222211 1 112344444444443 7
Q ss_pred cCCCeEEEEEecCCCccCCHHHHHHHHH-HHHHcCCcEEEec
Q 014320 195 KGINSFKFFMAYKGSFMINDELLIEGFK-RCKSLGALAMVHA 235 (427)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~-~a~~~g~~v~~H~ 235 (427)
.|++.+-+..-+ ....+++.+.+-++ .|...++|+.+..
T Consensus 95 ~Gadavlv~~P~--y~~~s~~~l~~~f~~ia~a~~lPiilYn 134 (291)
T 3a5f_A 95 IGVDGLLVITPY--YNKTTQKGLVKHFKAVSDAVSTPIIIYN 134 (291)
T ss_dssp TTCSEEEEECCC--SSCCCHHHHHHHC-CTGGGCCSCEEEEE
T ss_pred cCCCEEEEcCCC--CCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 899987554322 22346776665544 4666789998874
No 238
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=33.62 E-value=2e+02 Score=24.70 Aligned_cols=97 Identities=11% Similarity=0.121 Sum_probs=54.6
Q ss_pred ChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEE
Q 014320 123 TIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKF 202 (427)
Q Consensus 123 ~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~ 202 (427)
++++....+++++.+|++.+.-.... ....+.++..++.-+...+..+ .. .+ .++++..+ ..|++.+-
T Consensus 44 ~~~~a~~~a~al~~gGi~~iEvt~~t--~~a~e~I~~l~~~~~~~~iGaG---TV--lt---~~~a~~Ai-~AGA~fIv- 111 (232)
T 4e38_A 44 NAEDIIPLGKVLAENGLPAAEITFRS--DAAVEAIRLLRQAQPEMLIGAG---TI--LN---GEQALAAK-EAGATFVV- 111 (232)
T ss_dssp SGGGHHHHHHHHHHTTCCEEEEETTS--TTHHHHHHHHHHHCTTCEEEEE---CC--CS---HHHHHHHH-HHTCSEEE-
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCC--CCHHHHHHHHHHhCCCCEEeEC---Cc--CC---HHHHHHHH-HcCCCEEE-
Confidence 45666666788899999987632211 1345566655554333222211 11 12 34566666 68888762
Q ss_pred EEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhH
Q 014320 203 FMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAV 241 (427)
Q Consensus 203 ~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~ 241 (427)
. +..++ ++++.++++|+++..=+.+..++
T Consensus 112 --s----P~~~~----~vi~~~~~~gi~~ipGv~TptEi 140 (232)
T 4e38_A 112 --S----PGFNP----NTVRACQEIGIDIVPGVNNPSTV 140 (232)
T ss_dssp --C----SSCCH----HHHHHHHHHTCEEECEECSHHHH
T ss_pred --e----CCCCH----HHHHHHHHcCCCEEcCCCCHHHH
Confidence 2 22444 44556777898886666666554
No 239
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=33.05 E-value=1.6e+02 Score=26.47 Aligned_cols=56 Identities=11% Similarity=-0.000 Sum_probs=36.4
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc--CCcEEEecCChhh
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL--GALAMVHAENGDA 240 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~--g~~v~~H~e~~~~ 240 (427)
.+...++.+.+.+.|++.|.+. +..| ..+++.+.++++..++. ++++.+|+.++..
T Consensus 156 ~~~~~~~~~~~~~~Ga~~i~l~-DT~G--~~~P~~v~~lv~~l~~~~~~~~l~~H~Hnd~G 213 (307)
T 1ydo_A 156 IEQVIRLSEALFEFGISELSLG-DTIG--AANPAQVETVLEALLARFPANQIALHFHDTRG 213 (307)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEE-CSSC--CCCHHHHHHHHHHHHTTSCGGGEEEECBGGGS
T ss_pred HHHHHHHHHHHHhcCCCEEEEc-CCCC--CcCHHHHHHHHHHHHHhCCCCeEEEEECCCCc
Confidence 3444444443337899877553 3333 35788888888887664 5789999977653
No 240
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=31.77 E-value=2e+02 Score=25.94 Aligned_cols=103 Identities=13% Similarity=0.017 Sum_probs=56.3
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCccccc
Q 014320 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGHA 260 (427)
Q Consensus 181 ~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~ 260 (427)
+-+..+.+-+..++.+...|-- +++........+.+..+++.+.+.++||.+|.......+.+ .+..+.|+.+.=.-.
T Consensus 26 n~e~~~Ail~AAee~~sPvIlq-~s~g~~~y~g~~~~~~~v~~~a~~~VPValHlDHg~~~e~~-~~ai~~GFtSVMiDg 103 (305)
T 1rvg_A 26 NMEFLQAVLEAAEEQRSPVILA-LSEGAMKYGGRALTLMAVELAKEARVPVAVHLDHGSSYESV-LRALRAGFTSVMIDK 103 (305)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEE-EEHHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEEECSHHHH-HHHHHTTCSEEEECC
T ss_pred CHHHHHHHHHHHHHhCCCEEEE-CChhHHhhCCHHHHHHHHHHHHhCCCcEEEECCCCCCHHHH-HHHHHcCCCeeeeCC
Confidence 3455555555554555554421 12211111234556666666555999999997433333322 344577775442222
Q ss_pred ccCCHHHHHHHHHHHHHHHHhcCCC
Q 014320 261 LSRPPLLEGEATTRAIRLAEFVNTP 285 (427)
Q Consensus 261 ~~~p~~~e~~a~~~~~~~~~~~g~~ 285 (427)
-..|-.-.....++..+.+...|+.
T Consensus 104 S~~p~eENi~~Tk~vv~~ah~~gvs 128 (305)
T 1rvg_A 104 SHEDFETNVRETRRVVEAAHAVGVT 128 (305)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHTTCE
T ss_pred CCCCHHHHHHHHHHHHHHHHHcCCE
Confidence 2356555566777888888877754
No 241
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=31.66 E-value=42 Score=28.48 Aligned_cols=51 Identities=4% Similarity=-0.113 Sum_probs=31.9
Q ss_pred HHhcCCceEEecCCCCCChhhhhcCCCCCccCCCCCchhhHhHHHHHHHHHhcCCCCHHHHHHHHchhhhcC
Q 014320 355 ALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 355 ~l~~G~~~~lgSD~~p~~~~~~~~~~~~~~~~~~G~~~~e~~l~~~~~~~~~~~~l~l~~~v~~~t~npA~~ 426 (427)
.-+.|+.++++||. |.+.+ +.+.+... .+...-+++.+++.+..|.||.++
T Consensus 156 ~k~~g~~ivisSDA--h~~~~--------------v~~~~~~~-----~l~~~~G~~~e~~~~~l~~~~~~i 206 (212)
T 1v77_A 156 VEKYKVRRFLTSSA--QEKWD--------------VRYPRDLI-----SLGVVIGMEIPQAKASISMYPEII 206 (212)
T ss_dssp HHHHTCCEEEECCC--SSGGG--------------CCCHHHHH-----HHHHHTTCCHHHHHHTTTHHHHHH
T ss_pred HHhcCCCEEEeCCC--CChhh--------------cCCHHHHH-----HHHHHcCCCHHHHHHHHHHHHHHH
Confidence 33569999999992 32211 11111111 233445799999999999998653
No 242
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=31.59 E-value=2.8e+02 Score=24.64 Aligned_cols=110 Identities=14% Similarity=0.112 Sum_probs=59.6
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHHH---HHHHHHHHhccccceeceeccccC-CChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKAKNSCMDYGFHMAITK-WDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ 192 (427)
+..+.+.+....+..+..|+..+.-.+..+.. +..+ .++...+... ..+.+ ..+... ...+.++..+...
T Consensus 19 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pv--iaGvg~~~t~~ai~la~~A~ 95 (294)
T 3b4u_A 19 GTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGI-APSRI--VTGVLVDSIEDAADQSAEAL 95 (294)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTC-CGGGE--EEEECCSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcE--EEeCCCccHHHHHHHHHHHH
Confidence 45567777777788899999999876654432 2222 2232222221 11221 112222 2344444444443
Q ss_pred HHcCCCeEEEEEecCCCcc-CCHHHHHHHH-HHHHHc---CCcEEEec
Q 014320 193 KEKGINSFKFFMAYKGSFM-INDELLIEGF-KRCKSL---GALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~-~~~~~l~~~~-~~a~~~---g~~v~~H~ 235 (427)
+.|++.+-+.. +.... .+++.+.+-+ +.|... ++|+.+..
T Consensus 96 -~~Gadavlv~~--P~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn 140 (294)
T 3b4u_A 96 -NAGARNILLAP--PSYFKNVSDDGLFAWFSAVFSKIGKDARDILVYN 140 (294)
T ss_dssp -HTTCSEEEECC--CCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEE
T ss_pred -hcCCCEEEEcC--CcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEE
Confidence 78999875532 22223 4666666554 446666 89998873
No 243
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=31.38 E-value=1.6e+02 Score=26.54 Aligned_cols=72 Identities=8% Similarity=0.015 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHcCCcEEEecC---ChhhHHHHHHH-HHHc---CCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCE
Q 014320 215 ELLIEGFKRCKSLGALAMVHAE---NGDAVFEGQKR-MIEL---GITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPL 286 (427)
Q Consensus 215 ~~l~~~~~~a~~~g~~v~~H~e---~~~~~~~~~~~-l~~~---G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~ 286 (427)
..+..+...|++.++||.+|.. +.+.+..+++. ..+. |+.+.=.-.-..|-.-.....++..+.+...|+.+
T Consensus 69 ~~~~~~~~~A~~~~VPVaLHlDHg~~~e~i~~ai~~~~~~~~~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsV 147 (306)
T 3pm6_A 69 LLVRTAASACRAASVPITLHLDHAQDPEIIKRAADLSRSETHEPGFDSIMVDMSHFSKEENLRLTRELVAYCNARGIAT 147 (306)
T ss_dssp HHHHHHHHHHHHCSSCEEEEEEEECCHHHHHHHHHTC------CCCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEE
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCCCHHHHHHHHHhhhhccCCCCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeE
Confidence 4456667788889999999863 33333333221 1111 44322111223455545566667777776666543
No 244
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=31.06 E-value=1.6e+02 Score=21.76 Aligned_cols=15 Identities=27% Similarity=0.364 Sum_probs=11.6
Q ss_pred HHHHHHhhcCCCEEE
Q 014320 298 EEIAKARKAGQRVIG 312 (427)
Q Consensus 298 ~~i~~~~~~G~~v~~ 312 (427)
+.|..++++|+.|.+
T Consensus 94 dfieeakergvevfv 108 (162)
T 2l82_A 94 DFIEEAKERGVEVFV 108 (162)
T ss_dssp HHHHHHHHTTCEEEE
T ss_pred HHHHHHHhcCcEEEE
Confidence 457788899988765
No 245
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=31.03 E-value=1.4e+02 Score=25.80 Aligned_cols=111 Identities=16% Similarity=0.050 Sum_probs=57.7
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHcCCCe
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINS 199 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 199 (427)
...+.+++......+..+|+-+++-.. .......+.+...+.+...-.+|+.+.. ..+....+.++.+ +.|++-
T Consensus 38 p~~t~~~i~~lc~eA~~~~~~aVcV~p----~~v~~a~~~L~~s~v~v~tVigFP~G~~-~~~~Kv~Ea~~Ai-~~GAdE 111 (239)
T 3ngj_A 38 ADATEEQIRKLCSEAAEYKFASVCVNP----TWVPLCAELLKGTGVKVCTVIGFPLGAT-PSEVKAYETKVAV-EQGAEE 111 (239)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEECG----GGHHHHHHHHTTSSCEEEEEESTTTCCS-CHHHHHHHHHHHH-HTTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEECH----HHHHHHHHHhCCCCCeEEEEeccCCCCC-chHHHHHHHHHHH-HcCCCE
Confidence 346788888888999999999998432 1122222222111111111122322211 2233456677777 689999
Q ss_pred EEEEEecC----CCccCCHHHHHHHHHHHHHcCCcEEEecCCh
Q 014320 200 FKFFMAYK----GSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (427)
Q Consensus 200 ik~~~~~~----~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~ 238 (427)
+.+.+... +....-.+++.++.+.++ +.++-+=.|..
T Consensus 112 IDmViNig~lk~g~~~~v~~eI~~v~~a~~--~~~lKVIlEt~ 152 (239)
T 3ngj_A 112 VDMVINIGMVKAKKYDDVEKDVKAVVDASG--KALTKVIIECC 152 (239)
T ss_dssp EEEECCHHHHHTTCHHHHHHHHHHHHHHHT--TSEEEEECCGG
T ss_pred EEEEeehHHhccccHHHHHHHHHHHHHHhc--CCceEEEEecC
Confidence 98887653 111112345666666664 33444433443
No 246
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=30.71 E-value=1.8e+02 Score=26.41 Aligned_cols=94 Identities=10% Similarity=-0.077 Sum_probs=51.9
Q ss_pred CCHHHHHHHHHHHHHcC------C--cEEEecCChh------hHHHHHHHHHH-------cCCCCccccc-ccCCHHHHH
Q 014320 212 INDELLIEGFKRCKSLG------A--LAMVHAENGD------AVFEGQKRMIE-------LGITGPEGHA-LSRPPLLEG 269 (427)
Q Consensus 212 ~~~~~l~~~~~~a~~~g------~--~v~~H~e~~~------~~~~~~~~l~~-------~G~~~~~~~~-~~~p~~~e~ 269 (427)
.+.+..+++++.++++. + -+-+|+.... ......+.+.+ .|-.|...+. ...+.....
T Consensus 74 ~~~~~~~~~~~La~~~~~~~~~~v~~~~GiHP~~~~~~~~~~~l~~L~~l~~~~~~~vvAIGEiGLD~~~~~~~~~~~Q~ 153 (325)
T 3ipw_A 74 GCLNDFKKAIEIINKYQNLTNIKLVTTIGVHPTRTNELKQEGYLDELLLLCEKNIDKVVAIGEIGLDYERLQFSDKETQL 153 (325)
T ss_dssp CSHHHHHHHHHHHHHHGGGCSSEEEEEECCCGGGGGGGGSTTHHHHHHHHHHHTGGGEEEEEEEEEETTCCSSSCHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCcccceEEEEEEECcchhhcCCchHHHHHHHHHHhcCCCCEEEEEeeecCCCcCCCCCHHHHH
Confidence 57788888888888775 2 2344653211 12222222222 1222222222 223444556
Q ss_pred HHHHHHHHHHHh-cCCCEEEEcCCCHHHHHHHHHHhhcC
Q 014320 270 EATTRAIRLAEF-VNTPLYVVHVMSMDAMEEIAKARKAG 307 (427)
Q Consensus 270 ~a~~~~~~~~~~-~g~~~~i~H~~~~~~~~~i~~~~~~G 307 (427)
....+.++++.+ .+.++ +.|+..+.. +.++.+++.+
T Consensus 154 ~~F~~ql~lA~e~~~lPv-iiH~r~A~~-d~l~iL~~~~ 190 (325)
T 3ipw_A 154 SGYRTLSILHQKYPYLPF-FFHCRKSWS-DLCQLNKELG 190 (325)
T ss_dssp HHHHHTHHHHHHCTTCCE-EEEEESCHH-HHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhCCeE-EEEeCchHH-HHHHHHHhcC
Confidence 777889999999 99987 677765442 5555565544
No 247
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=30.19 E-value=3.3e+02 Score=25.08 Aligned_cols=45 Identities=20% Similarity=0.110 Sum_probs=32.1
Q ss_pred CHHHHHHHHHHHHHHHHhcCCCEEEEcCC-C-HHHHHHHHHHhhcCCC
Q 014320 264 PPLLEGEATTRAIRLAEFVNTPLYVVHVM-S-MDAMEEIAKARKAGQR 309 (427)
Q Consensus 264 p~~~e~~a~~~~~~~~~~~g~~~~i~H~~-~-~~~~~~i~~~~~~G~~ 309 (427)
+...+.......++++++.|+++ +.|+. . ....+.++.+++.|++
T Consensus 184 ~t~~q~~~f~aq~~~A~~~glPV-~iH~~gr~~a~~e~l~iL~e~g~~ 230 (364)
T 3k2g_A 184 FTAEEEKSLRGAARAQVRTGLPL-MVHLPGWFRLAHRVLDLVEEEGAD 230 (364)
T ss_dssp CCHHHHHHHHHHHHHHHHHCCCE-EEECCTTSCCHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHHHHHCCeE-EEecCCCCccHHHHHHHHHHcCCC
Confidence 44566778888999999999996 77862 1 2235677777777754
No 248
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=30.14 E-value=1.7e+02 Score=25.74 Aligned_cols=65 Identities=15% Similarity=0.143 Sum_probs=37.1
Q ss_pred HHHHHcCCCCcccccccC--CHHHHHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCCCEEE
Q 014320 246 KRMIELGITGPEGHALSR--PPLLEGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQRVIG 312 (427)
Q Consensus 246 ~~l~~~G~~~~~~~~~~~--p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~ 312 (427)
+++.+.|+.+.+.+.... +.. ......+.++.+.+.|.++ +.|+....-.+..+.+++.+++++.
T Consensus 112 ~~l~~~gv~Gi~l~~~~~~~~~~-~~~~~~~~~~~a~~~glpv-~iH~~~~~l~~~~~~l~~~p~~~Vi 178 (294)
T 4i6k_A 112 VNLKAQGIVGVRLNLFGLNLPAL-NTPDWQKFLRNVESLNWQV-ELHAPPKYLVQLLPQLNEYSFDVVI 178 (294)
T ss_dssp HHHHTTTEEEEEEECTTSCCCCS-SSHHHHHHHHHHHHTTCEE-EEECCHHHHHHHHHHHTTSSSCEEE
T ss_pred HHHHHCCCcEEEeccCCCCCCCc-ccHHHHHHHHHHHHcCCEE-EEeeCcchHHHHHHHHHHCCCCEEE
Confidence 445555666655433211 122 2356678888899999876 6787654423445556665554443
No 249
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=30.07 E-value=3e+02 Score=24.58 Aligned_cols=120 Identities=15% Similarity=0.082 Sum_probs=68.0
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecC--CCccCC-HHHHHHHHHHHHH---cCCcEEEecCChhhHHHHHHHHHHcCCCC
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYK--GSFMIN-DELLIEGFKRCKS---LGALAMVHAENGDAVFEGQKRMIELGITG 255 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~--~~~~~~-~~~l~~~~~~a~~---~g~~v~~H~e~~~~~~~~~~~l~~~G~~~ 255 (427)
+..++..++++ +.|++.|.+..... +...++ ++++++++...+. .++++.+=....+.++.+++ .|..-
T Consensus 46 ~~a~~~a~~~v-~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~~vpiSIDT~~~~Va~aAl~----aGa~i 120 (294)
T 2y5s_A 46 DDALRRAERMI-AEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNVPLSIDTYKPAVMRAALA----AGADL 120 (294)
T ss_dssp THHHHHHHHHH-HTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGGCSCEEEECCCHHHHHHHHH----HTCSE
T ss_pred HHHHHHHHHHH-HCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHH----cCCCE
Confidence 44556666676 78999888766432 222233 5566655444433 38888888777766654433 34421
Q ss_pred cccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCC----C------------H----HHHHHHHHHhhcCCC---EEE
Q 014320 256 PEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVM----S------------M----DAMEEIAKARKAGQR---VIG 312 (427)
Q Consensus 256 ~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~----~------------~----~~~~~i~~~~~~G~~---v~~ 312 (427)
....... . ..+.+.+++++++++.+.|.. + . .-.+.++.+.+.|++ +..
T Consensus 121 INdVsg~-------~-d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~~~Iil 192 (294)
T 2y5s_A 121 INDIWGF-------R-QPGAIDAVRDGNSGLCAMHMLGEPQTMQVGEPDYGDVVTDVRDFLAARAQALRDAGVAAERICV 192 (294)
T ss_dssp EEETTTT-------C-STTHHHHHSSSSCEEEEECCCEETTTTEECCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred EEECCCC-------C-chHHHHHHHHhCCCEEEECCCCCCccccccCCccccHHHHHHHHHHHHHHHHHHcCCChhhEEE
Confidence 1111000 0 123456778899999999963 0 1 112456667788975 665
Q ss_pred ec
Q 014320 313 EP 314 (427)
Q Consensus 313 ~~ 314 (427)
++
T Consensus 193 DP 194 (294)
T 2y5s_A 193 DP 194 (294)
T ss_dssp EC
T ss_pred eC
Confidence 53
No 250
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=29.99 E-value=3e+02 Score=24.64 Aligned_cols=108 Identities=12% Similarity=0.031 Sum_probs=60.0
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHhccccceeceecccc-CCChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAKNSCMDYGFHMAIT-KWDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~ 192 (427)
+..+.+.+....+..+..||..+.-.+.++.. +.. +.++...+...+ +.+ ..+.. ....+.++..+...
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~gr--vpV--iaGvg~~~t~~ai~la~~A~ 99 (313)
T 3dz1_A 24 GKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKS--MQV--IVGVSAPGFAAMRRLARLSM 99 (313)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTT--SEE--EEECCCSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCC--CcE--EEecCCCCHHHHHHHHHHHH
Confidence 44567777777888899999999876644332 222 233333333212 222 11222 22344444444444
Q ss_pred HHcCCCeEEEEEecCCCccCCHHHHHHHH-HHHHHcC--CcEEEec
Q 014320 193 KEKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLG--ALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~a~~~g--~~v~~H~ 235 (427)
+.|++.+-+ +.|. +..+++.+.+-+ +.|...+ +|+.+..
T Consensus 100 -~~Gadavlv-~~P~--~~~s~~~l~~~f~~va~a~~~~lPiilYn 141 (313)
T 3dz1_A 100 -DAGAAGVMI-APPP--SLRTDEQITTYFRQATEAIGDDVPWVLQD 141 (313)
T ss_dssp -HHTCSEEEE-CCCT--TCCSHHHHHHHHHHHHHHHCTTSCEEEEE
T ss_pred -HcCCCEEEE-CCCC--CCCCHHHHHHHHHHHHHhCCCCCcEEEEe
Confidence 789998855 3333 234666665544 4556667 9998873
No 251
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=29.92 E-value=3e+02 Score=24.51 Aligned_cols=119 Identities=13% Similarity=0.043 Sum_probs=61.2
Q ss_pred HHHHHcCCceEEe--cC-cCCCCCcHHHHHHHHHHHhcccccee--ceeccccCCChhhHHHHHHHH---HHcCCCeEEE
Q 014320 131 QAAALAGGTTMHI--DF-VIPINGSLTAGFEAYEKKAKNSCMDY--GFHMAITKWDEVVSDEMEVMV---KEKGINSFKF 202 (427)
Q Consensus 131 ~~~~l~~GvTtv~--d~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~---~~~g~~~ik~ 202 (427)
+..+.++|..-+. +- ...+.+.....++..++.. ...+.. ....+....+++.++.|.+.+ ++.|+++|-+
T Consensus 52 a~~A~~gGAdRIELc~~l~~GGlTPS~g~i~~a~~~~-~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~~GAdGvVf 130 (287)
T 3iwp_A 52 AVNAERGGADRIELCSGLSEGGTTPSMGVLQVVKQSV-QIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKLYGADGLVF 130 (287)
T ss_dssp HHHHHHHTCSEEEECBCGGGTCBCCCHHHHHHHHTTC-CSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHhCCCEEEECCCCCCCCCCCCHHHHHHHHHhc-CCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 5677888888765 21 1112223344555444322 111211 111111122333344333322 2689998865
Q ss_pred EE-ecCCCccCCHHHHHHHHHHHHHcCCcEEEe-cCCh-hhHHHHHHHHHHcCCC
Q 014320 203 FM-AYKGSFMINDELLIEGFKRCKSLGALAMVH-AENG-DAVFEGQKRMIELGIT 254 (427)
Q Consensus 203 ~~-~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H-~e~~-~~~~~~~~~l~~~G~~ 254 (427)
.. ++ ....+.+.++++++.++ ++.++.| +-+. ......++.+.++|+.
T Consensus 131 G~L~~--dg~iD~~~~~~Li~~a~--~l~vTFHRAFD~~~d~~~Ale~Li~lGvd 181 (287)
T 3iwp_A 131 GALTE--DGHIDKELCMSLMAICR--PLPVTFHRAFDMVHDPMAALETLLTLGFE 181 (287)
T ss_dssp CCBCT--TSCBCHHHHHHHHHHHT--TSCEEECGGGGGCSCHHHHHHHHHHHTCS
T ss_pred eeeCC--CCCcCHHHHHHHHHHcC--CCcEEEECchhccCCHHHHHHHHHHcCCC
Confidence 42 22 23478899999999875 5899999 4332 1233445666666664
No 252
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=29.47 E-value=1.7e+02 Score=24.96 Aligned_cols=98 Identities=14% Similarity=0.170 Sum_probs=58.4
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHcCCCeEE
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFK 201 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik 201 (427)
.+.+.....+++++.+|+..+.-.... ....+.++..++.-+...+..+ +-.+ .+++++.+ ..|++.+
T Consensus 22 ~~~~~a~~~a~al~~gGi~~iEvt~~t--~~a~~~I~~l~~~~p~~~IGAG-----TVlt---~~~a~~ai-~AGA~fi- 89 (217)
T 3lab_A 22 DDLVHAIPMAKALVAGGVHLLEVTLRT--EAGLAAISAIKKAVPEAIVGAG-----TVCT---ADDFQKAI-DAGAQFI- 89 (217)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEETTS--TTHHHHHHHHHHHCTTSEEEEE-----CCCS---HHHHHHHH-HHTCSEE-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCC--ccHHHHHHHHHHHCCCCeEeec-----cccC---HHHHHHHH-HcCCCEE-
Confidence 456667777889999999987643222 2455666666655433222221 1112 34566666 7888876
Q ss_pred EEEecCCCccCCHHHHHHHHHHHHHcCC------cEEEecCChhhH
Q 014320 202 FFMAYKGSFMINDELLIEGFKRCKSLGA------LAMVHAENGDAV 241 (427)
Q Consensus 202 ~~~~~~~~~~~~~~~l~~~~~~a~~~g~------~v~~H~e~~~~~ 241 (427)
++| .+++ ++++.++++|+ ++.-=+.+.+++
T Consensus 90 --vsP----~~~~----evi~~~~~~~v~~~~~~~~~PG~~TptE~ 125 (217)
T 3lab_A 90 --VSP----GLTP----ELIEKAKQVKLDGQWQGVFLPGVATASEV 125 (217)
T ss_dssp --EES----SCCH----HHHHHHHHHHHHCSCCCEEEEEECSHHHH
T ss_pred --EeC----CCcH----HHHHHHHHcCCCccCCCeEeCCCCCHHHH
Confidence 233 2455 45566777788 877777776655
No 253
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=29.43 E-value=3.1e+02 Score=24.52 Aligned_cols=113 Identities=4% Similarity=-0.192 Sum_probs=60.2
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHHH---HHHHHHHHhccccceeceeccccCCChhhHHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTA---GFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVK 193 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 193 (427)
+..+.+.+....+..+..||..+.-.+.++.. +..+ .++...+.. ...+.+-...+ .....+.++..+...
T Consensus 30 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~-~gr~pviaGvg-~~~t~~ai~la~~A~- 106 (307)
T 3s5o_A 30 AEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAM-PKNRLLLAGSG-CESTQATVEMTVSMA- 106 (307)
T ss_dssp SCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTS-CTTSEEEEECC-CSSHHHHHHHHHHHH-
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHc-CCCCcEEEecC-CCCHHHHHHHHHHHH-
Confidence 45667777777888899999999876654432 2222 222222221 11222211111 122344444444444
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHH-HHHHHHcCCcEEEec
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEG-FKRCKSLGALAMVHA 235 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~-~~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+..-+...+..+++.+.+- .+.|...++|+.+..
T Consensus 107 ~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn 149 (307)
T 3s5o_A 107 QVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYS 149 (307)
T ss_dssp HTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred HcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEe
Confidence 789998865432211112466655554 455666799998874
No 254
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=29.43 E-value=3.1e+02 Score=24.52 Aligned_cols=110 Identities=9% Similarity=0.002 Sum_probs=54.0
Q ss_pred hhhHHHHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHh--ccccceeceecc-ccCCChhhHHHHHHHHHHcCCCe
Q 014320 124 IDDFFSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKA--KNSCMDYGFHMA-ITKWDEVVSDEMEVMVKEKGINS 199 (427)
Q Consensus 124 ~e~~~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~g~~~ 199 (427)
.++.....+.|+..|++.+=....+.+. ...+.++...... .+..+....... .....+...+.+++-+++.|.+.
T Consensus 64 ~~e~~~~v~~Al~~Gi~~~DTA~~YgnE~~vG~~l~~~~~~~~i~r~~~~i~~k~~~~~~~~~~~~~~~e~SL~rL~~dy 143 (314)
T 3b3d_A 64 GSELVNAVKTAIVHGYRSIDTAAIYGNEAGVGEGIREGIEEAGISREDLFITSKVWNADLGYEETLAAFETSLSKLGLDY 143 (314)
T ss_dssp SHHHHHHHHHHHHHTCCEEECCGGGTCHHHHHHHHHHHHHHHTCCGGGCEEEEEECGGGCSHHHHHHHHHHHHHHHTCSC
T ss_pred HHHHHHHHHHHHHcCCCEEECccccCChHHHHHHHHHHHHHhCCCcccccccccCcCCCCCHHHHHHHHHHHHHHhCCCc
Confidence 3455666888999999986432223221 1222332222221 111111110011 11122344455665555778888
Q ss_pred EEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEe
Q 014320 200 FKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH 234 (427)
Q Consensus 200 ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H 234 (427)
|.++.-. .+.....++..+.++.+++.|+.-.+=
T Consensus 144 iDL~~~H-~~~~~~~~e~~~al~~l~~~Gkir~iG 177 (314)
T 3b3d_A 144 LDLYLIH-WPVEGKYKEAWRALETLYKEGRIKAIG 177 (314)
T ss_dssp EEEEEES-SCCTTTHHHHHHHHHHHHHTTSEEEEE
T ss_pred ccccccc-cccccchhHHHHHHHHHHHCCCEeEEE
Confidence 8877643 233334455556667777777654443
No 255
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=29.28 E-value=3.1e+02 Score=24.57 Aligned_cols=110 Identities=8% Similarity=-0.046 Sum_probs=60.3
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVK 193 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 193 (427)
+..+.+.+....+..+..|+..+.-.+..+.. +.. +.++...+... ..+.+-. +......+.++..+...
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~-grvpVia--Gvg~st~~ai~la~~A~- 103 (314)
T 3d0c_A 28 REIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVN-GRATVVA--GIGYSVDTAIELGKSAI- 103 (314)
T ss_dssp CCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHT-TSSEEEE--EECSSHHHHHHHHHHHH-
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhC-CCCeEEe--cCCcCHHHHHHHHHHHH-
Confidence 45667777777788899999999876544332 222 23333333322 1222211 12222344444444443
Q ss_pred HcCCCeEEEEEecCCCccCCHHHHHHHH-HHHHHcCCcEEEec
Q 014320 194 EKGINSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHA 235 (427)
Q Consensus 194 ~~g~~~ik~~~~~~~~~~~~~~~l~~~~-~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+.. +.....+++.+.+-+ +.|...++|+.+..
T Consensus 104 ~~Gadavlv~~--P~y~~~s~~~l~~~f~~va~a~~lPiilYn 144 (314)
T 3d0c_A 104 DSGADCVMIHQ--PVHPYITDAGAVEYYRNIIEALDAPSIIYF 144 (314)
T ss_dssp HTTCSEEEECC--CCCSCCCHHHHHHHHHHHHHHSSSCEEEEE
T ss_pred HcCCCEEEECC--CCCCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 78999875532 212234666655544 55677789998875
No 256
>2anu_A Hypothetical protein TM0559; predicted metal-dependent phosphoesterase (PHP famil structural genomics, joint center for structural genomics; 2.40A {Thermotoga maritima} SCOP: c.6.3.1
Probab=29.05 E-value=31 Score=30.20 Aligned_cols=33 Identities=18% Similarity=0.099 Sum_probs=24.5
Q ss_pred ccccccccccCcCCCCChhhHHHHHHHHHcCCceEEe
Q 014320 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (427)
Q Consensus 107 ~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~ 143 (427)
++|.|+|...+ .|..+.+++ .+.|.+.|++.+.
T Consensus 21 ~~DlH~Ht~~S-Dg~~t~ee~---v~~A~~~Gl~~i~ 53 (255)
T 2anu_A 21 LCDFHVHTNMS-DGHLPLGEV---VDLFGKHGVDVVS 53 (255)
T ss_dssp EEEEEECCTTT-TCSSCHHHH---HHHHHHTTCSEEE
T ss_pred EEEEeecCCCc-CCCCCHHHH---HHHHHHCCCCEEE
Confidence 68999998765 455566654 6778888998765
No 257
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=28.73 E-value=3e+02 Score=24.23 Aligned_cols=47 Identities=11% Similarity=0.123 Sum_probs=30.2
Q ss_pred HHHHHHHcCCCeEEEEEecCCCcc---CCHHHHHHHHHHHHHcCCcEEEe
Q 014320 188 MEVMVKEKGINSFKFFMAYKGSFM---INDELLIEGFKRCKSLGALAMVH 234 (427)
Q Consensus 188 ~~~l~~~~g~~~ik~~~~~~~~~~---~~~~~l~~~~~~a~~~g~~v~~H 234 (427)
+.+.+++.|.+.+.++........ ...+..+++.+.++++|+.+..+
T Consensus 40 ~~~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~i~~~ 89 (316)
T 3qxb_A 40 AGLVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRKAGLTIEST 89 (316)
T ss_dssp HHHHHHTSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHcCCCEEEeeccccCccccccchhhHHHHHHHHHHHcCCeEEEe
Confidence 344444789999988764322111 12236778888889999998754
No 258
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=28.44 E-value=3.2e+02 Score=24.35 Aligned_cols=130 Identities=14% Similarity=0.069 Sum_probs=70.4
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEEecCCCcc-CCHHHHHHHHH-HHH--HcCCcEEEecCChhhHHHHHHHHHHcCCCCc
Q 014320 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFM-INDELLIEGFK-RCK--SLGALAMVHAENGDAVFEGQKRMIELGITGP 256 (427)
Q Consensus 181 ~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~-~~~~~l~~~~~-~a~--~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~ 256 (427)
+-+..+.+-+..++.+...|-- +++..... ...+.+..++. .|+ +.++||.+|.......+. +.+..+.|+.+.
T Consensus 30 n~e~~~avi~AAee~~sPvIlq-~s~~~~~~~~g~~~~~~~v~~~A~~~~~~VPValHlDHg~~~e~-i~~ai~~GFtSV 107 (288)
T 3q94_A 30 NLEWTQAILAAAEEEKSPVILG-VSEGAARHMTGFKTVVAMVKALIEEMNITVPVAIHLDHGSSFEK-CKEAIDAGFTSV 107 (288)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEE-EEHHHHHHTSCHHHHHHHHHHHHHHTTCCSCEEEEEEEECSHHH-HHHHHHHTCSEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEE-CChhhhhhcCCHHHHHHHHHHHHHhcCCCCcEEEECCCCCCHHH-HHHHHHcCCCeE
Confidence 3455555555555556554422 22211111 34555655554 566 689999999643323322 244556787544
Q ss_pred ccccccCCHHHHHHHHHHHHHHHHhcCCCEEEE--cCC------------CHHHHHHHHHHhhcCCCEEE
Q 014320 257 EGHALSRPPLLEGEATTRAIRLAEFVNTPLYVV--HVM------------SMDAMEEIAKARKAGQRVIG 312 (427)
Q Consensus 257 ~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~--H~~------------~~~~~~~i~~~~~~G~~v~~ 312 (427)
=.-.-..|-.-.....++..+.+...|+.+-.+ ++. ..++.+..++.++.|+...+
T Consensus 108 MiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD~LA 177 (288)
T 3q94_A 108 MIDASHHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLVEATGIDCLA 177 (288)
T ss_dssp EECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCGGGGCBCCCHHHHHHHHHHHCCSEEE
T ss_pred EEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcCCccccCCCHHHHHHHHHHHCCCEEE
Confidence 222223566656677788888888888765432 221 11223455556678887554
No 259
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=27.85 E-value=3.6e+02 Score=24.77 Aligned_cols=53 Identities=13% Similarity=0.223 Sum_probs=32.9
Q ss_pred HHHHHHHHHHcC-----CCeEEEEEec-C-----CCccCCHHHHHHHHHHHH-Hc-------CCcEEEecCC
Q 014320 185 SDEMEVMVKEKG-----INSFKFFMAY-K-----GSFMINDELLIEGFKRCK-SL-------GALAMVHAEN 237 (427)
Q Consensus 185 ~~~~~~l~~~~g-----~~~ik~~~~~-~-----~~~~~~~~~l~~~~~~a~-~~-------g~~v~~H~e~ 237 (427)
.++..+.+++.| ++.+-+.++. | +.+.++.+.|+++-+... +. ++++..|-.+
T Consensus 184 Peea~~Fv~~tg~~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~I~~~v~~~~~~~~~~~~vpLVlHGgS 255 (349)
T 3elf_A 184 PEDFEKTIEALGAGEHGKYLLAATFGNVHGVYKPGNVKLRPDILAQGQQVAAAKLGLPADAKPFDFVFHGGS 255 (349)
T ss_dssp HHHHHHHHHHHTTSTTSCEEEEECSSCBSSCCCTTSSCCCTHHHHHHHHHHHHHHTCCTTCCCCCEEECCCT
T ss_pred HHHHHHHHHHhCCCCCCceEEEEecCCcccCCCCCCCccCHHHHHHHHHHHHhhcCCccccCCCcEEEeCCC
Confidence 345556565555 6766554432 2 335568888888877663 33 5899999533
No 260
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=27.67 E-value=3.2e+02 Score=24.16 Aligned_cols=107 Identities=9% Similarity=-0.028 Sum_probs=56.9
Q ss_pred ChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHHHHc
Q 014320 123 TIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMVKEK 195 (427)
Q Consensus 123 ~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 195 (427)
+.+.+....+..+..||..+.-.+..+.. +.. +.++...+.. .+..+-.+. + .....+.++..+... +.
T Consensus 21 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGv--g-~~~t~~ai~la~~a~-~~ 96 (292)
T 3daq_A 21 NLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGT--G-TNDTEKSIQASIQAK-AL 96 (292)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC--C-CSCHHHHHHHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeC--C-cccHHHHHHHHHHHH-Hc
Confidence 44556666777889999999876644332 222 2333333332 222222221 1 122344444444444 68
Q ss_pred CCCeEEEEEecCCCccCCHHHHHHH-HHHHHHcCCcEEEec
Q 014320 196 GINSFKFFMAYKGSFMINDELLIEG-FKRCKSLGALAMVHA 235 (427)
Q Consensus 196 g~~~ik~~~~~~~~~~~~~~~l~~~-~~~a~~~g~~v~~H~ 235 (427)
|++.+-+..-+ ....+++.+.+- -+.|+..++|+.+..
T Consensus 97 Gadavlv~~P~--y~~~~~~~l~~~f~~ia~a~~lPiilYn 135 (292)
T 3daq_A 97 GADAIMLITPY--YNKTNQRGLVKHFEAIADAVKLPVVLYN 135 (292)
T ss_dssp TCSEEEEECCC--SSCCCHHHHHHHHHHHHHHHCSCEEEEE
T ss_pred CCCEEEECCCC--CCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 99988654322 223466655554 445566799998873
No 261
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=27.66 E-value=3.5e+02 Score=24.59 Aligned_cols=115 Identities=11% Similarity=0.065 Sum_probs=64.8
Q ss_pred HHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecC-----ChhhHHHHHHHHHHcCCCCcc---
Q 014320 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAE-----NGDAVFEGQKRMIELGITGPE--- 257 (427)
Q Consensus 186 ~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e-----~~~~~~~~~~~l~~~G~~~~~--- 257 (427)
+.+++.. +.|++.+.++.... ..+.+.+.++.++++|+.+..-++ +.+.+....+.+.+.|.....
T Consensus 97 ~~i~~a~-~aGvd~v~I~~~~s-----~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~D 170 (345)
T 1nvm_A 97 HDLKNAY-QAGARVVRVATHCT-----EADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMAD 170 (345)
T ss_dssp HHHHHHH-HHTCCEEEEEEETT-----CGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHH-hCCcCEEEEEEecc-----HHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEECC
Confidence 4456655 67999888875322 235778888999999998877752 234455555667777653221
Q ss_pred cccccCCHHHHHHHHHHHHHHH-Hhc--CCCEEE-EcCCCHHHHHHHHHHhhcCCCEE
Q 014320 258 GHALSRPPLLEGEATTRAIRLA-EFV--NTPLYV-VHVMSMDAMEEIAKARKAGQRVI 311 (427)
Q Consensus 258 ~~~~~~p~~~e~~a~~~~~~~~-~~~--g~~~~i-~H~~~~~~~~~i~~~~~~G~~v~ 311 (427)
......|. .+.+.+... +.. +.++.+ +|-+..-++.-.-.+.+.|+..+
T Consensus 171 T~G~~~P~-----~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aGa~~v 223 (345)
T 1nvm_A 171 SGGAMSMN-----DIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCDRV 223 (345)
T ss_dssp TTCCCCHH-----HHHHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTTCCEE
T ss_pred CcCccCHH-----HHHHHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcCCCEE
Confidence 11111222 233333333 233 455433 45555555566666777887654
No 262
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=27.49 E-value=97 Score=27.94 Aligned_cols=33 Identities=27% Similarity=0.221 Sum_probs=25.0
Q ss_pred ccccccccccCcCCCCChhhHHHHHHHHHcCCceEEe
Q 014320 107 GIDPHTHLAMEFMGSETIDDFFSGQAAALAGGTTMHI 143 (427)
Q Consensus 107 ~ID~H~H~~~~~~g~~~~e~~~~~~~~~l~~GvTtv~ 143 (427)
++|.|+|...+ .|..+++++ .+.+...|+..+.
T Consensus 14 ~~DLH~Hs~~S-DG~~~~~el---v~~A~~~Gl~~ia 46 (301)
T 3o0f_A 14 GWDIHCHTVFS-DGTETPRTL---VEQARKLGLHGVA 46 (301)
T ss_dssp SEEEEECCTTT-TCSSCHHHH---HHHHHHTTCSEEE
T ss_pred eEEeeECCCCC-CCCCCHHHH---HHHHHHcCCCEEE
Confidence 79999998765 456666665 6677889998765
No 263
>3kdn_A Rubisco, ribulose bisphosphate carboxylase; ribulose-1,5-bisphosphate carboxylase/oxygenase, Ca dioxide fixation, lyase, magnesium; HET: KCX CAP; 2.09A {Thermococcus kodakaraensis} PDB: 3a13_A* 3kdo_A* 3a12_A* 1geh_A*
Probab=27.43 E-value=3.9e+02 Score=25.46 Aligned_cols=111 Identities=13% Similarity=0.012 Sum_probs=59.4
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcCCCCC---cHHHHHHHHHH----HhccccceeceeccccCCChhhHHHHHHHHHH
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEK----KAKNSCMDYGFHMAITKWDEVVSDEMEVMVKE 194 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 194 (427)
++++.+......++.+|+--+-|-....+. ...+.+....+ +....--...+...++...++..+..+... +
T Consensus 168 Ls~~~~a~~~ye~~~GGlDfiKDDE~l~~qpf~p~~eRv~~v~eai~rA~~eTGe~k~y~~NiTa~~~eM~~Ra~~a~-e 246 (444)
T 3kdn_A 168 YSPEEFEKLAYDLLSNGADYMKDDENLTSPWYNRFEERAEIMAKIIDKVENETGEKKTWFANITADLLEMEQRLEVLA-D 246 (444)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEECCTTCCSCTTSCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCSSHHHHHHHHHHHH-H
T ss_pred CCHHHHHHHHHHHHhcCCceeecCcCCCCCCCCCHHHHHHHHHHHHHHHHHhhCCcceEEeecCCCHHHHHHHHHHHH-H
Confidence 467788888889999999988876433322 33333332222 211100011111222332334444444443 5
Q ss_pred cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCCh
Q 014320 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (427)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~ 238 (427)
.|...+ ++++ .......++.+.+.+.+.+++++.|-...
T Consensus 247 ~G~~~~--mvd~---~~~G~~a~~~l~~~~~~~~l~lh~HrA~~ 285 (444)
T 3kdn_A 247 LGLKHA--MVDV---VITGWGALRYIRDLAADYGLAIHGHRAMH 285 (444)
T ss_dssp HTCCEE--EEEH---HHHCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred cCCCEE--EEcc---ccccHHHHHHHHHhccccCeEEEEccCcc
Confidence 677653 3332 12345567777777778899999995443
No 264
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=26.91 E-value=2.2e+02 Score=26.10 Aligned_cols=48 Identities=10% Similarity=0.272 Sum_probs=31.8
Q ss_pred HHHHHHHcCCCeEEEEEecCCCccCCHH--------HHHHHHHHHHHcCCcEEEecCCh
Q 014320 188 MEVMVKEKGINSFKFFMAYKGSFMINDE--------LLIEGFKRCKSLGALAMVHAENG 238 (427)
Q Consensus 188 ~~~l~~~~g~~~ik~~~~~~~~~~~~~~--------~l~~~~~~a~~~g~~v~~H~e~~ 238 (427)
++.++ +.|++.+.++-.+.+ .++++ .++++++..++.|.++..|+.+.
T Consensus 199 ~~~~~-~aGad~i~i~D~~~~--~lsp~~f~ef~~p~~~~i~~~i~~~g~~~i~~~~G~ 254 (359)
T 2inf_A 199 VKAQI-KAGAKAIQIFDSWVG--ALNQADYRTYIKPVMNRIFSELAKENVPLIMFGVGA 254 (359)
T ss_dssp HHHHH-HTTCSEEEEECTTGG--GSCHHHHHHHTHHHHHHHHHHHGGGCSCEEEECTTC
T ss_pred HHHHH-HhCCCEEEEeCCccc--cCCHHHHHHHhHHHHHHHHHHHHHcCCcEEEEcCCc
Confidence 34444 579998877654332 45654 44566777877799999997554
No 265
>2hnh_A DNA polymerase III alpha subunit; DNA replication, nucleotidyltransferase, beta, PHP, transferase; HET: DNA; 2.30A {Escherichia coli} PDB: 2hqa_A*
Probab=26.88 E-value=96 Score=32.81 Aligned_cols=56 Identities=18% Similarity=0.083 Sum_probs=35.7
Q ss_pred eccccccccccccCc-CCCCChhhHHHHHHHHHcCCceEEe--cCcCCCCCcHHHHHHHHHHHh
Q 014320 104 MPGGIDPHTHLAMEF-MGSETIDDFFSGQAAALAGGTTMHI--DFVIPINGSLTAGFEAYEKKA 164 (427)
Q Consensus 104 ~PG~ID~H~H~~~~~-~g~~~~e~~~~~~~~~l~~GvTtv~--d~~~~~~~~~~~~~~~~~~~~ 164 (427)
|+.|+|.|+|...++ .|..+++++ .+.|...|...+. |+... ....+..+..++.+
T Consensus 3 M~~~vdLH~HT~~S~lDG~~~~~el---v~~A~~~Gl~alAITDH~~~--~G~~~~~~~~~~~g 61 (910)
T 2hnh_A 3 EPRFVHLRVHSDYSMIDGLAKTAPL---VKKAAALGMPALAITDFTNL--CGLVKFYGAGHGAG 61 (910)
T ss_dssp CCCCCCCCBCCGGGSSSCCSCHHHH---HHHHHHTTCSEEEECCBTCC--TTHHHHHHHHHHHT
T ss_pred CCceeeecccccCchhcccCCHHHH---HHHHHHCCCCEEEEEeCCcc--hhHHHHHHHHHHCC
Confidence 456999999988764 466777766 6677888988765 44321 13444444444444
No 266
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=26.73 E-value=3.1e+02 Score=23.61 Aligned_cols=47 Identities=13% Similarity=0.053 Sum_probs=32.4
Q ss_pred HHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEec
Q 014320 187 EMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHA 235 (427)
Q Consensus 187 ~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~ 235 (427)
+.-+.+++.|.+++.+.... .....++.+.++.+.++++|+.+..|.
T Consensus 21 ~~l~~~~~~G~~~vEl~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~ 67 (290)
T 2qul_A 21 ATAKRIAGLGFDLMEISLGE--FHNLSDAKKRELKAVADDLGLTVMCCI 67 (290)
T ss_dssp HHHHHHHHTTCSEEEEESTT--GGGSCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHhCCCEEEEecCC--ccccchhhHHHHHHHHHHcCCceEEec
Confidence 33333347899999886532 112245778888899999999998874
No 267
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=26.70 E-value=3.9e+02 Score=24.86 Aligned_cols=118 Identities=10% Similarity=-0.002 Sum_probs=65.8
Q ss_pred hhHHHHHHHHHHcCCCeEEEEE-ecCC----CccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcc
Q 014320 183 VVSDEMEVMVKEKGINSFKFFM-AYKG----SFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPE 257 (427)
Q Consensus 183 ~~~~~~~~l~~~~g~~~ik~~~-~~~~----~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~ 257 (427)
+...++.+.+++.|++.+|... .+.. ....+.+.++.+.+.+++.|+++.+-+.+...+....+. .....
T Consensus 156 e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~Gl~~~te~~d~~~~~~l~~~-vd~lk---- 230 (385)
T 3nvt_A 156 EQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYGLGVISEIVTPADIEVALDY-VDVIQ---- 230 (385)
T ss_dssp HHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEECCSGGGHHHHTTT-CSEEE----
T ss_pred HHHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcCCEEEEecCCHHHHHHHHhh-CCEEE----
Confidence 3344444444478998876532 1111 112467889999999999999999988887776544211 11100
Q ss_pred cccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCC--H-HHHHHHHHHhhcCC-CEEE
Q 014320 258 GHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMS--M-DAMEEIAKARKAGQ-RVIG 312 (427)
Q Consensus 258 ~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~--~-~~~~~i~~~~~~G~-~v~~ 312 (427)
.+...- .-...+..+...|.++.+.-... . +-...++.+++.|- +++.
T Consensus 231 -----Igs~~~--~n~~LL~~~a~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L 282 (385)
T 3nvt_A 231 -----IGARNM--QNFELLKAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIIL 282 (385)
T ss_dssp -----ECGGGT--TCHHHHHHHHTSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEE
T ss_pred -----ECcccc--cCHHHHHHHHccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEE
Confidence 111000 00134555667889998887653 2 22333455566664 3443
No 268
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=26.49 E-value=3.4e+02 Score=24.62 Aligned_cols=104 Identities=13% Similarity=-0.002 Sum_probs=56.7
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHH--cCCcEEEecCChhhHHHHHHHHHHcCCCCccc
Q 014320 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKS--LGALAMVHAENGDAVFEGQKRMIELGITGPEG 258 (427)
Q Consensus 181 ~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~--~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~ 258 (427)
+-+..+.+-+..++.+...|- -++.........+.+..++..+.+ .++||.+|.......+. +....+.|+.+.=.
T Consensus 27 n~e~~~Ail~AAee~~sPvIl-q~s~g~~~y~g~~~~~~~v~~aa~~~~~VPValHlDHg~~~e~-i~~ai~~GFtSVMi 104 (323)
T 2isw_A 27 NMEQIQGIMKAVVQLKSPVIL-QCSRGALKYSDMIYLKKLCEAALEKHPDIPICIHLDHGDTLES-VKMAIDLGFSSVMI 104 (323)
T ss_dssp SHHHHHHHHHHHHHTTCCEEE-EEEHHHHHHTTTHHHHHHHHHHHHHCTTSCEEEEEEEECSHHH-HHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEE-ECChhHHHhCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCHHH-HHHHHHcCCCeEEe
Confidence 345555555555455555442 122211112244556666655544 68999999643322222 34556778754422
Q ss_pred ccccCCHHHHHHHHHHHHHHHHhcCCCE
Q 014320 259 HALSRPPLLEGEATTRAIRLAEFVNTPL 286 (427)
Q Consensus 259 ~~~~~p~~~e~~a~~~~~~~~~~~g~~~ 286 (427)
-.-..|-.-.....++..+.+...|+.+
T Consensus 105 DgS~~p~eENi~~Tk~vv~~ah~~gvsV 132 (323)
T 2isw_A 105 DASHHPFDENVRITKEVVAYAHARSVSV 132 (323)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHTTTCEE
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHcCCeE
Confidence 2224566656677788888888777654
No 269
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=26.36 E-value=2.8e+02 Score=24.67 Aligned_cols=104 Identities=7% Similarity=-0.025 Sum_probs=55.6
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHH-HHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCCCCcccc
Q 014320 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIE-GFKRCKSLGALAMVHAENGDAVFEGQKRMIELGITGPEGH 259 (427)
Q Consensus 181 ~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~-~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~ 259 (427)
+-+..+.+-+..++.+...|- -+++........+.+.. +...|+++++||.+|.......+. +....+.|+.+.=.-
T Consensus 27 n~e~~~avl~AAe~~~sPvIl-q~s~~~~~y~g~~~~~~~v~~~a~~~~VPValHlDHg~~~e~-i~~ai~~GFtSVMiD 104 (286)
T 1gvf_A 27 NAETIQAILEVCSEMRSPVIL-AGTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHESLDD-IRRKVHAGVRSAMID 104 (286)
T ss_dssp SHHHHHHHHHHHHHHTCCCEE-EECTTHHHHSCHHHHHHHHHHHHHHTTSCBEEEEEEECCHHH-HHHHHHTTCCEEEEC
T ss_pred CHHHHHHHHHHHHHhCCCEEE-ECChhHHhhcCHHHHHHHHHHHHHhCCCcEEEEcCCCCCHHH-HHHHHHcCCCeEEEC
Confidence 344455555555455554431 22222111224344444 455667789999999643322322 244556787543222
Q ss_pred cccCCHHHHHHHHHHHHHHHHhcCCCE
Q 014320 260 ALSRPPLLEGEATTRAIRLAEFVNTPL 286 (427)
Q Consensus 260 ~~~~p~~~e~~a~~~~~~~~~~~g~~~ 286 (427)
.-..|-.-.....++..+.+...|+.+
T Consensus 105 gS~lp~eeNi~~Tk~vv~~ah~~gvsV 131 (286)
T 1gvf_A 105 GSHFPFAENVKLVKSVVDFCHSQDCSV 131 (286)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCEE
Confidence 224565555677788888888877543
No 270
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=25.98 E-value=3.4e+02 Score=23.91 Aligned_cols=81 Identities=12% Similarity=-0.054 Sum_probs=46.7
Q ss_pred cCCcEEEecCChhhHHHHHHHHHHcCCCCccccc----------ccCCHHHHHHHHHHHHHHHHhcCCCEE--EEcC---
Q 014320 227 LGALAMVHAENGDAVFEGQKRMIELGITGPEGHA----------LSRPPLLEGEATTRAIRLAEFVNTPLY--VVHV--- 291 (427)
Q Consensus 227 ~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~~~~----------~~~p~~~e~~a~~~~~~~~~~~g~~~~--i~H~--- 291 (427)
.+.++.+|..+.+ .++++.+.|+....... ..++.....+.+.+.++.+++.|..+. ++..
T Consensus 71 ~~~~v~~l~~n~~----~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~ 146 (295)
T 1ydn_A 71 DGVRYSVLVPNMK----GYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVEC 146 (295)
T ss_dssp SSSEEEEECSSHH----HHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEE
T ss_pred CCCEEEEEeCCHH----HHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecC
Confidence 3778878874432 23455566664333211 124444455666778888888888765 4443
Q ss_pred -----CC-HHHHHHHHHHhhcCCCEE
Q 014320 292 -----MS-MDAMEEIAKARKAGQRVI 311 (427)
Q Consensus 292 -----~~-~~~~~~i~~~~~~G~~v~ 311 (427)
.. ....+.++.+.+.|+...
T Consensus 147 e~~~~~~~~~~~~~~~~~~~~G~d~i 172 (295)
T 1ydn_A 147 PYDGPVTPQAVASVTEQLFSLGCHEV 172 (295)
T ss_dssp TTTEECCHHHHHHHHHHHHHHTCSEE
T ss_pred CcCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 12 233555666668887644
No 271
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=25.83 E-value=3e+02 Score=23.21 Aligned_cols=22 Identities=9% Similarity=-0.062 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHhcCCCEEEEcC
Q 014320 270 EATTRAIRLAEFVNTPLYVVHV 291 (427)
Q Consensus 270 ~a~~~~~~~~~~~g~~~~i~H~ 291 (427)
+.+.+..+.+++.|+++.+...
T Consensus 124 ~~l~~l~~~a~~~gv~l~~E~~ 145 (260)
T 1k77_A 124 DNIRYAADRFAPHGKRILVEAL 145 (260)
T ss_dssp HHHHHHHHHHGGGTCEEEECCC
T ss_pred HHHHHHHHHHHHcCCEEEEEeC
Confidence 4445566666677777666544
No 272
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=25.32 E-value=3.5e+02 Score=23.81 Aligned_cols=107 Identities=11% Similarity=0.078 Sum_probs=58.9
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHhccccceeceeccccC-CChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKAKNSCMDYGFHMAITK-WDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~ 192 (427)
+..+.+.+....+..+..|+..+.-.+..+.. +.. +.++...+.... ...+... ...+.++..+...
T Consensus 14 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g------vi~Gvg~~~t~~ai~la~~A~ 87 (286)
T 2r91_A 14 GRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR------VIVQVASLNADEAIALAKYAE 87 (286)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS------EEEECCCSSHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC------EEEeeCCCCHHHHHHHHHHHH
Confidence 34556677777778899999999876654432 222 222333332222 1112222 2344444444443
Q ss_pred HHcCCCeEEEEEecCCCcc-CCHHHHHHHH-HHHHHcCCcEEEec
Q 014320 193 KEKGINSFKFFMAYKGSFM-INDELLIEGF-KRCKSLGALAMVHA 235 (427)
Q Consensus 193 ~~~g~~~ik~~~~~~~~~~-~~~~~l~~~~-~~a~~~g~~v~~H~ 235 (427)
+.|++.+-+.. +.... .+++.+.+-+ +.|...++|+.+..
T Consensus 88 -~~Gadavlv~~--P~y~~~~s~~~l~~~f~~va~a~~lPiilYn 129 (286)
T 2r91_A 88 -SRGAEAVASLP--PYYFPRLSERQIAKYFRDLCSAVSIPVFLYN 129 (286)
T ss_dssp -HTTCSEEEECC--SCSSTTCCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred -hcCCCEEEEcC--CcCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 78999875532 22223 4666665544 45667799998873
No 273
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=25.20 E-value=6.6e+02 Score=27.27 Aligned_cols=124 Identities=13% Similarity=0.054 Sum_probs=63.7
Q ss_pred HHHHHHHHcCCceEEecCcCCCCC-cHHHHHHHHHHHhccccceeceeccc------cCCChhhHHHHHHHHHHcCCCeE
Q 014320 128 FSGQAAALAGGTTMHIDFVIPING-SLTAGFEAYEKKAKNSCMDYGFHMAI------TKWDEVVSDEMEVMVKEKGINSF 200 (427)
Q Consensus 128 ~~~~~~~l~~GvTtv~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~g~~~i 200 (427)
....+.+..+|+..++-+....+. ......+..++.+........+.... ...+.+...++.+.+.+.|++.|
T Consensus 630 ~~~v~~a~~~Gvd~irif~~~sd~~~~~~~~~~~~e~g~~~~~~i~~~~~~~~pe~~~~~~~~~~~~~a~~~~~~Ga~~i 709 (1150)
T 3hbl_A 630 HKFVQESAKAGIDVFRIFDSLNWVDQMKVANEAVQEAGKISEGTICYTGDILNPERSNIYTLEYYVKLAKELEREGFHIL 709 (1150)
T ss_dssp HHHHHHHHHTTCCEEEEECTTCCGGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTTCSSSSHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHhCCcCEEEEEeeCCHHHHHHHHHHHHHHHhhheeEEEeecccccChhhcCCCCHHHHHHHHHHHHHcCCCee
Confidence 344677788999887654322222 34444555555543221112221111 11223334344443337898876
Q ss_pred EEEEecCCCccCCHHHHHHHHHHHHH-cCCcEEEecCChhhHHHHH-HHHHHcCCC
Q 014320 201 KFFMAYKGSFMINDELLIEGFKRCKS-LGALAMVHAENGDAVFEGQ-KRMIELGIT 254 (427)
Q Consensus 201 k~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~e~~~~~~~~~-~~l~~~G~~ 254 (427)
.+. +..| ..++....++++..++ .++++++|+.++....... -...+.|..
T Consensus 710 ~l~-Dt~G--~~~P~~~~~lv~~l~~~~~~~i~~H~Hnt~G~a~An~laA~~aGa~ 762 (1150)
T 3hbl_A 710 AIK-DMAG--LLKPKAAYELIGELKSAVDLPIHLHTHDTSGNGLLTYKQAIDAGVD 762 (1150)
T ss_dssp EEE-ETTC--CCCHHHHHHHHHHHHHHCCSCEEEEECBTTSCHHHHHHHHHHTTCS
T ss_pred eEc-CccC--CCCHHHHHHHHHHHHHhcCCeEEEEeCCCCcHHHHHHHHHHHhCCC
Confidence 442 2222 3577888888777655 5899999987765432221 223345554
No 274
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=24.49 E-value=1.1e+02 Score=27.70 Aligned_cols=47 Identities=13% Similarity=0.106 Sum_probs=32.8
Q ss_pred HHHHHHHHcCCCeEEE--EEecCCCcc-CCHHHHHHHHHHHHHcCCcEEEe
Q 014320 187 EMEVMVKEKGINSFKF--FMAYKGSFM-INDELLIEGFKRCKSLGALAMVH 234 (427)
Q Consensus 187 ~~~~l~~~~g~~~ik~--~~~~~~~~~-~~~~~l~~~~~~a~~~g~~v~~H 234 (427)
.+++.+ +.|++.+|+ .+.+..... -..+.+.++.++|+++|+++.++
T Consensus 133 sVe~Av-rlGADaV~~l~~i~~Gs~~e~~~l~~la~vv~ea~~~GlP~~~e 182 (307)
T 3fok_A 133 NVSSMV-DRGVDFAKTLVRINLSDAGTAPTLEATAHAVNEAAAAQLPIMLE 182 (307)
T ss_dssp CHHHHH-HHTCCEEEEEEEECTTCTTHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CHHHHH-HCCCCEEEEEEEECCCChhHHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 466666 789999984 444332221 12456778899999999999998
No 275
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=24.41 E-value=2e+02 Score=25.26 Aligned_cols=50 Identities=8% Similarity=0.178 Sum_probs=37.9
Q ss_pred HHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHH
Q 014320 188 MEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFE 243 (427)
Q Consensus 188 ~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~ 243 (427)
+.+.. ..|++.+-+... ..++++++++.+.|++.|+.+.+-+.+.++++.
T Consensus 119 I~eAr-~~GADaILLI~a-----~L~~~~l~~l~~~A~~lGl~~LvEVh~~~El~r 168 (258)
T 4a29_A 119 IDDAY-NLGADTVLLIVK-----ILTERELESLLEYARSYGMEPLILINDENDLDI 168 (258)
T ss_dssp HHHHH-HHTCSEEEEEGG-----GSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHH
T ss_pred HHHHH-HcCCCeeehHHh-----hcCHHHHHHHHHHHHHHhHHHHHhcchHHHHHH
Confidence 44443 689998866553 368999999999999999988877777766543
No 276
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=24.40 E-value=3.2e+02 Score=23.10 Aligned_cols=103 Identities=15% Similarity=-0.095 Sum_probs=51.8
Q ss_pred HHHHHHHHHcCCceEEecCcCC-CCCcHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHHHHHHcCCCeEEEEEe
Q 014320 127 FFSGQAAALAGGTTMHIDFVIP-INGSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEVMVKEKGINSFKFFMA 205 (427)
Q Consensus 127 ~~~~~~~~l~~GvTtv~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ik~~~~ 205 (427)
+....+.+...|+..+--.... ......+.++.+++......+.+...........+.++..-++.+..|+..+.+..
T Consensus 32 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~p- 110 (257)
T 3lmz_A 32 LDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIVGVP- 110 (257)
T ss_dssp HHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEECSHHHHHHHHHHHHHHTCSEEEEEE-
T ss_pred HHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEeccccCCHHHHHHHHHHHHHhCCCEEEecC-
Confidence 4444667778888887532211 11111222333333322222222111111111223333344444467888776532
Q ss_pred cCCCccCCHHHHHHHHHHHHHcCCcEEEecCC
Q 014320 206 YKGSFMINDELLIEGFKRCKSLGALAMVHAEN 237 (427)
Q Consensus 206 ~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~ 237 (427)
..+.++++.+.|+++|+.+.+|..+
T Consensus 111 -------~~~~l~~l~~~a~~~gv~l~lEn~~ 135 (257)
T 3lmz_A 111 -------NYELLPYVDKKVKEYDFHYAIHLHG 135 (257)
T ss_dssp -------CGGGHHHHHHHHHHHTCEEEEECCC
T ss_pred -------CHHHHHHHHHHHHHcCCEEEEecCC
Confidence 2467888899999999999888653
No 277
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=24.14 E-value=3.7e+02 Score=23.67 Aligned_cols=56 Identities=5% Similarity=-0.046 Sum_probs=36.0
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc-C-CcEEEecCChh
Q 014320 181 DEVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL-G-ALAMVHAENGD 239 (427)
Q Consensus 181 ~~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~-g-~~v~~H~e~~~ 239 (427)
+.+...++.+.+.+.|++.+.+. +..|. .+++...++++..++. . +++.+|+.++.
T Consensus 153 ~~~~~~~~~~~~~~~G~d~i~l~-Dt~G~--~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~ 210 (295)
T 1ydn_A 153 TPQAVASVTEQLFSLGCHEVSLG-DTIGR--GTPDTVAAMLDAVLAIAPAHSLAGHYHDTG 210 (295)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEE-ETTSC--CCHHHHHHHHHHHHTTSCGGGEEEEEBCTT
T ss_pred CHHHHHHHHHHHHhcCCCEEEec-CCCCC--cCHHHHHHHHHHHHHhCCCCeEEEEECCCc
Confidence 33444444444437899988765 44443 5788888888877653 3 67888886653
No 278
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=24.08 E-value=3.9e+02 Score=23.91 Aligned_cols=110 Identities=14% Similarity=-0.045 Sum_probs=58.3
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHH---HHHHHHHHHh-ccccceeceeccccCCChhhHHHHHHHH
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLT---AGFEAYEKKA-KNSCMDYGFHMAITKWDEVVSDEMEVMV 192 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 192 (427)
+..+.+.+....+..+..|+..+.-.+..+.. +.. +.++...+.. .+..+-.+. + .....+.++..+...
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGv--g-~~~t~~ai~la~~A~ 99 (311)
T 3h5d_A 23 GSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGV--G-TNDTRDSIEFVKEVA 99 (311)
T ss_dssp SSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEEC--C-CSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC--C-CcCHHHHHHHHHHHH
Confidence 44566777777888899999998877654432 222 2233333322 122222211 1 112334444444443
Q ss_pred HHcCC-CeEEEEEecCCCccCCHHHHHHHH-HHHHHcCCcEEEec
Q 014320 193 KEKGI-NSFKFFMAYKGSFMINDELLIEGF-KRCKSLGALAMVHA 235 (427)
Q Consensus 193 ~~~g~-~~ik~~~~~~~~~~~~~~~l~~~~-~~a~~~g~~v~~H~ 235 (427)
+.|+ +.+-+.. |. ....+++.+.+-+ +.|...++|+.+..
T Consensus 100 -~~Ga~davlv~~-P~-y~~~s~~~l~~~f~~va~a~~lPiilYn 141 (311)
T 3h5d_A 100 -EFGGFAAGLAIV-PY-YNKPSQEGMYQHFKAIADASDLPIIIYN 141 (311)
T ss_dssp -HSCCCSEEEEEC-CC-SSCCCHHHHHHHHHHHHHSCSSCEEEEE
T ss_pred -hcCCCcEEEEcC-CC-CCCCCHHHHHHHHHHHHHhCCCCEEEEe
Confidence 5676 8775432 21 2234666655544 45566799999873
No 279
>2d69_A Ribulose bisphosphate carboxylase; alpha/beta barrel, structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.90A {Pyrococcus horikoshii} SCOP: c.1.14.1 d.58.9.1 PDB: 2cxe_A 2cwx_A
Probab=23.98 E-value=4.7e+02 Score=24.79 Aligned_cols=111 Identities=10% Similarity=0.024 Sum_probs=59.2
Q ss_pred CChhhHHHHHHHHHcCCceEEecCcCCCCC---cHHHHHHHHHHH----hccccceeceeccccCCChhhHHHHHHHHHH
Q 014320 122 ETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKK----AKNSCMDYGFHMAITKWDEVVSDEMEVMVKE 194 (427)
Q Consensus 122 ~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 194 (427)
++++.+.......+.+|+--+-|-....+. ...+.+....+. ....--...+....+...++..+..+... +
T Consensus 165 Ls~~~~a~~~ye~~~GGlDfiKDDE~l~~qpf~p~~eRv~~v~eai~ra~~eTGe~k~y~~NiTa~~~em~~Ra~~a~-e 243 (430)
T 2d69_A 165 WSVEEYAEIAYELWSGGIDLLKDDENFTSFPFNRFEERVRKLYRVRDRVEAETGETKEYLINITGPVNIMEKRAEMVA-N 243 (430)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEECCTTCSCBTTBCHHHHHHHHHHHHHHHHHHHSSCCEEECBCCSSHHHHHHHHHHHH-H
T ss_pred CCHHHHHHHHHHHHhCCCcEeECCCCCCCCCCccHHHHHHHHHHHHHHHHHhhCCccEEEeecCCCHHHHHHHHHHHH-H
Confidence 467788888889999999888876433222 333333322221 11100001111222322334334333333 6
Q ss_pred cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCCh
Q 014320 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENG 238 (427)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~ 238 (427)
.|...+-+ ++ .......++.+.+.+++.+++++.|-...
T Consensus 244 ~G~~~~mv--d~---~~~G~~a~~~l~~~~r~~~l~lh~HrA~h 282 (430)
T 2d69_A 244 EGGQYVMI--DI---VVAGWSALQYMREVTEDLGLAIHAHRAMH 282 (430)
T ss_dssp HTCCEEEE--EH---HHHCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred cCCCeEEE--Ee---eccChHHHHHHHHHhhccCcEEEeccCCc
Confidence 77765422 21 12245567788888878899999995443
No 280
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=23.76 E-value=3.4e+02 Score=23.07 Aligned_cols=107 Identities=9% Similarity=-0.007 Sum_probs=57.0
Q ss_pred ChhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceece--eccccCCChhhHHHHHHHHHHcCCCeE
Q 014320 123 TIDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGF--HMAITKWDEVVSDEMEVMVKEKGINSF 200 (427)
Q Consensus 123 ~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~g~~~i 200 (427)
.++.+...++++..+|...+.- ...+.++..++.-....+...- +.+....-....+++.++. ..|++.+
T Consensus 34 ~~~~~~~~A~a~~~~Ga~~i~~-------~~~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~-~aGad~I 105 (229)
T 3q58_A 34 KPEIVAAMAQAAASAGAVAVRI-------EGIENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALA-QAGADII 105 (229)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEE-------ESHHHHHHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHH-HHTCSEE
T ss_pred CcchHHHHHHHHHHCCCcEEEE-------CCHHHHHHHHHhcCCCEEEEEeecCCCCceEeCccHHHHHHHH-HcCCCEE
Confidence 3455666678888899888763 1233444443322111110000 0000001112344566666 7899977
Q ss_pred EEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhH
Q 014320 201 KFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAV 241 (427)
Q Consensus 201 k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~ 241 (427)
-+-... ..+++.+.++++.+++.|+.+.+-+.+.++.
T Consensus 106 ~l~~~~----~~~p~~l~~~i~~~~~~g~~v~~~v~t~eea 142 (229)
T 3q58_A 106 AFDASF----RSRPVDIDSLLTRIRLHGLLAMADCSTVNEG 142 (229)
T ss_dssp EEECCS----SCCSSCHHHHHHHHHHTTCEEEEECSSHHHH
T ss_pred EECccc----cCChHHHHHHHHHHHHCCCEEEEecCCHHHH
Confidence 442221 1234678888899999999887766665444
No 281
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=23.58 E-value=1.2e+02 Score=26.82 Aligned_cols=35 Identities=17% Similarity=0.141 Sum_probs=20.8
Q ss_pred cCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEE
Q 014320 195 KGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMV 233 (427)
Q Consensus 195 ~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~ 233 (427)
.-++.+|+..+ ...+.++ +++.++.++++|+.+..
T Consensus 64 ~yID~lKfg~G---Ts~l~~~-l~ekI~l~~~~gV~v~~ 98 (276)
T 1u83_A 64 DYIDFVKFGWG---TSLLTKD-LEEKISTLKEHDITFFF 98 (276)
T ss_dssp GGCCEEEECTT---GGGGCTT-HHHHHHHHHHTTCEEEE
T ss_pred hhcceEEecCc---chhhhHH-HHHHHHHHHHcCCeEeC
Confidence 44667776332 2223333 77778888888877654
No 282
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=23.57 E-value=3.8e+02 Score=23.55 Aligned_cols=117 Identities=13% Similarity=-0.002 Sum_probs=62.2
Q ss_pred HHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcE-EEecCChhhHHHHHHHHHHcCCCCccc--ccccC
Q 014320 187 EMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALA-MVHAENGDAVFEGQKRMIELGITGPEG--HALSR 263 (427)
Q Consensus 187 ~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v-~~H~e~~~~~~~~~~~l~~~G~~~~~~--~~~~~ 263 (427)
+.-+.+++.|.+.+.++....+.+ ......++.+.++++|+.+ .+|+...... ..+|.. .....
T Consensus 33 ~~l~~~a~~G~~~VEl~~~~~~~~--~~~~~~~~~~~l~~~GL~v~~~~~~~~~~~-----------~~~p~~~~~~~~~ 99 (303)
T 3l23_A 33 ANLRKVKDMGYSKLELAGYGKGAI--GGVPMMDFKKMAEDAGLKIISSHVNPVDTS-----------ISDPFKAMIFKYS 99 (303)
T ss_dssp HHHHHHHHTTCCEEEECCEETTEE--TTEEHHHHHHHHHHTTCEEEEEECCCBCTT-----------CSSTTTTBCCSCC
T ss_pred HHHHHHHHcCCCEEEeccccCccc--CCCCHHHHHHHHHHcCCeEEEEeccccccc-----------ccCcccccccccc
Confidence 333333478999998764321111 1122455556677899987 5785321000 000000 00000
Q ss_pred C--HHHHHHHHHHHHHHHHhcCCCEEEEcCC----CHHH-------H-HHHHHHhhcCCC--EEEecCc
Q 014320 264 P--PLLEGEATTRAIRLAEFVNTPLYVVHVM----SMDA-------M-EEIAKARKAGQR--VIGEPVV 316 (427)
Q Consensus 264 p--~~~e~~a~~~~~~~~~~~g~~~~i~H~~----~~~~-------~-~~i~~~~~~G~~--v~~~~~p 316 (427)
+ .....+.+++.++.+...|++..++|.. ..+. + +..+.+++.|+. +..+..+
T Consensus 100 ~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~~l~~En~~ 168 (303)
T 3l23_A 100 KEVTPKIMEYWKATAADHAKLGCKYLIQPMMPTITTHDEAKLVCDIFNQASDVIKAEGIATGFGYHNHN 168 (303)
T ss_dssp TTTHHHHHHHHHHHHHHHHHTTCSEEEECSCCCCCSHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred hhhHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcceEEEccCc
Confidence 0 0122466788999999999998777743 1211 1 233556788999 8877654
No 283
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=23.47 E-value=2.6e+02 Score=24.39 Aligned_cols=18 Identities=11% Similarity=0.159 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHcCCcEE
Q 014320 215 ELLIEGFKRCKSLGALAM 232 (427)
Q Consensus 215 ~~l~~~~~~a~~~g~~v~ 232 (427)
+.+++.++.|++.|.+..
T Consensus 105 ~~~~~~i~~A~~lGa~~v 122 (296)
T 2g0w_A 105 KKEQTTFHMARLFGVKHI 122 (296)
T ss_dssp HHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHcCCCEE
Confidence 355667777777776643
No 284
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=23.02 E-value=4.1e+02 Score=23.76 Aligned_cols=101 Identities=11% Similarity=0.010 Sum_probs=58.9
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHH----HcCCcEEEecCChhhHHHHHHHHHHcCCCCcc
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCK----SLGALAMVHAENGDAVFEGQKRMIELGITGPE 257 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~----~~g~~v~~H~e~~~~~~~~~~~l~~~G~~~~~ 257 (427)
+..++..++++ +.|++.|.+..+. ......+++++++...+ ..++++++=....+.++.+++.+ .|..-..
T Consensus 37 ~~a~~~A~~~v-~~GAdiIDIg~g~--~~v~~~eem~rvv~~i~~~~~~~~vpisIDT~~~~V~eaaL~~~--~Ga~iIN 111 (300)
T 3k13_A 37 DEALSIARQQV-EDGALVIDVNMDD--GLLDARTEMTTFLNLIMSEPEIARVPVMIDSSKWEVIEAGLKCL--QGKSIVN 111 (300)
T ss_dssp HHHHHHHHHHH-HTTCSEEEEECCC--TTSCHHHHHHHHHHHHHTCHHHHTSCEEEECSCHHHHHHHHHHC--SSCCEEE
T ss_pred HHHHHHHHHHH-HCCCCEEEECCCC--CCCCHHHHHHHHHHHHHHhhhcCCCeEEEeCCCHHHHHHHHHhc--CCCCEEE
Confidence 34455556666 7899988876632 12223567888777665 35889988877776665554322 2331111
Q ss_pred cccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcC
Q 014320 258 GHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHV 291 (427)
Q Consensus 258 ~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~ 291 (427)
... -......+.+.+.+++++|+++.+.|.
T Consensus 112 dIs----~~~~d~~~~~~~~l~a~~ga~vV~mh~ 141 (300)
T 3k13_A 112 SIS----LKEGEEVFLEHARIIKQYGAATVVMAF 141 (300)
T ss_dssp EEC----STTCHHHHHHHHHHHHHHTCEEEEESE
T ss_pred eCC----cccCChhHHHHHHHHHHhCCeEEEEee
Confidence 000 000012234567788888999888887
No 285
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=22.96 E-value=3.5e+02 Score=23.03 Aligned_cols=21 Identities=5% Similarity=-0.039 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHcCCcE-EEec
Q 014320 215 ELLIEGFKRCKSLGALA-MVHA 235 (427)
Q Consensus 215 ~~l~~~~~~a~~~g~~v-~~H~ 235 (427)
+.+++.++.|++.|.+. .+|.
T Consensus 93 ~~~~~~i~~A~~lGa~~v~~~~ 114 (269)
T 3ngf_A 93 DNVDIALHYALALDCRTLHAMS 114 (269)
T ss_dssp HHHHHHHHHHHHTTCCEEECCB
T ss_pred HHHHHHHHHHHHcCCCEEEEcc
Confidence 56777888888888754 4454
No 286
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=22.87 E-value=3.5e+02 Score=22.97 Aligned_cols=112 Identities=11% Similarity=-0.042 Sum_probs=60.7
Q ss_pred hhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHHHHHHHHhccccceecee----ccccCCChhhHHHHHHHHHHcCCCe
Q 014320 124 IDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGFEAYEKKAKNSCMDYGFH----MAITKWDEVVSDEMEVMVKEKGINS 199 (427)
Q Consensus 124 ~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~g~~~ 199 (427)
++.....++++..+|...+.- ...+.++..++.-. .++ ++.. .+.........+++.++. ..|++.
T Consensus 35 ~~~~~~~A~a~~~~Ga~~i~~-------~~~~~i~~ir~~v~-~Pv-ig~~k~d~~~~~~~I~~~~~~i~~~~-~~Gad~ 104 (232)
T 3igs_A 35 PEIVAAMALAAEQAGAVAVRI-------EGIDNLRMTRSLVS-VPI-IGIIKRDLDESPVRITPFLDDVDALA-QAGAAI 104 (232)
T ss_dssp HHHHHHHHHHHHHTTCSEEEE-------ESHHHHHHHHTTCC-SCE-EEECBCCCSSCCCCBSCSHHHHHHHH-HHTCSE
T ss_pred cchHHHHHHHHHHCCCeEEEE-------CCHHHHHHHHHhcC-CCE-EEEEeecCCCcceEeCccHHHHHHHH-HcCCCE
Confidence 455666678888899887763 12344444443321 111 1110 000001112344566666 789997
Q ss_pred EEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEecCChhhHHHHHHHHHHcCC
Q 014320 200 FKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVHAENGDAVFEGQKRMIELGI 253 (427)
Q Consensus 200 ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~~~G~ 253 (427)
+-+-... ..+++.+.++++.+++.|+.+.+-+.+.++. +++.+.|.
T Consensus 105 V~l~~~~----~~~p~~l~~~i~~~~~~g~~v~~~v~t~eea----~~a~~~Ga 150 (232)
T 3igs_A 105 IAVDGTA----RQRPVAVEALLARIHHHHLLTMADCSSVDDG----LACQRLGA 150 (232)
T ss_dssp EEEECCS----SCCSSCHHHHHHHHHHTTCEEEEECCSHHHH----HHHHHTTC
T ss_pred EEECccc----cCCHHHHHHHHHHHHHCCCEEEEeCCCHHHH----HHHHhCCC
Confidence 7443221 1234678888999999999888766665444 23445554
No 287
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=22.54 E-value=4.4e+02 Score=23.93 Aligned_cols=112 Identities=12% Similarity=0.036 Sum_probs=54.9
Q ss_pred ChhhHHHHHHHHHcCCceEEecCcCCCC--CcHHHHHHHHHHH---hcc--ccce--eceec--ccc-C--CChhhHHHH
Q 014320 123 TIDDFFSGQAAALAGGTTMHIDFVIPIN--GSLTAGFEAYEKK---AKN--SCMD--YGFHM--AIT-K--WDEVVSDEM 188 (427)
Q Consensus 123 ~~e~~~~~~~~~l~~GvTtv~d~~~~~~--~~~~~~~~~~~~~---~~~--~~~~--~~~~~--~~~-~--~~~~~~~~~ 188 (427)
+.+......+.|+..|++.+=....+.+ ....+.+-...+. ..| ..+. ++... ... . ..+...+.+
T Consensus 62 ~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~~~R~~v~I~TK~g~~~~~~~~~~~~s~~~i~~~~ 141 (353)
T 3erp_A 62 RVENSRALLQRAFDLGITHFDLANNYGPPPGSAECNFGRILQEDFLPWRDELIISTKAGYTMWDGPYGDWGSRKYLIASL 141 (353)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHHTGGGGGGCEEEEEESSCCSSSTTSSTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEChhhhCCCCChHHHHHHHHHHhhccCCCCeEEEEeeeccCCCCCcccCCCCHHHHHHHH
Confidence 4556667788899999998643323332 2122333222221 112 1111 11110 000 0 123344556
Q ss_pred HHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEe
Q 014320 189 EVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH 234 (427)
Q Consensus 189 ~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H 234 (427)
++-+++.|.+.+.+++-....+..+.++.-+.++..++.|+.-.+=
T Consensus 142 e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~aL~~l~~~Gkir~iG 187 (353)
T 3erp_A 142 DQSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVRHGKALYVG 187 (353)
T ss_dssp HHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHhCCCeEeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEE
Confidence 6655567888888776533222334455556666677777654443
No 288
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=22.51 E-value=4.4e+02 Score=24.36 Aligned_cols=71 Identities=13% Similarity=0.040 Sum_probs=38.3
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHc---CCcEEEecCChhhHHHH-HHHHHHcCCCCc
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSL---GALAMVHAENGDAVFEG-QKRMIELGITGP 256 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~e~~~~~~~~-~~~l~~~G~~~~ 256 (427)
.+...++.+.+.+. ++.|.+. +..| ..++..+.++++..++. ++++.+|+.++....-. .-...+.|....
T Consensus 144 ~~~~~~~~~~~~~~-a~~i~l~-DT~G--~~~P~~~~~lv~~l~~~~~~~~~i~~H~Hnd~GlAvAN~laAv~aGa~~v 218 (382)
T 2ztj_A 144 EQDLLAVYEAVAPY-VDRVGLA-DTVG--VATPRQVYALVREVRRVVGPRVDIEFHGHNDTGCAIANAYEAIEAGATHV 218 (382)
T ss_dssp HHHHHHHHHHHGGG-CSEEEEE-ETTS--CCCHHHHHHHHHHHHHHHTTTSEEEEEEBCTTSCHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHh-cCEEEec-CCCC--CCCHHHHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEE
Confidence 33344444333256 7765432 2222 35688888887777654 68899998666433222 123345666433
No 289
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=22.50 E-value=4e+02 Score=23.47 Aligned_cols=110 Identities=10% Similarity=-0.007 Sum_probs=59.4
Q ss_pred CCCChhhHHHHHHHHHcCCceEEecCcCCCCC---cHHHHHHHHHHHhccccceeceeccccC-CChhhHHHHHHHHHHc
Q 014320 120 GSETIDDFFSGQAAALAGGTTMHIDFVIPING---SLTAGFEAYEKKAKNSCMDYGFHMAITK-WDEVVSDEMEVMVKEK 195 (427)
Q Consensus 120 g~~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~ 195 (427)
+..+.+.+....+..+..|+..+.-.+.++.. +..+..+..+..... .-. ...+... ...+.++..+... +.
T Consensus 15 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~-~~g--ViaGvg~~~t~~ai~la~~A~-~~ 90 (288)
T 2nuw_A 15 GKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDV-THK--LIFQVGSLNLNDVMELVKFSN-EM 90 (288)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTT-CSC--EEEECCCSCHHHHHHHHHHHH-TS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH-hCC--eEEeeCCCCHHHHHHHHHHHH-hc
Confidence 45567777777788899999999877654433 222222222222211 111 2222222 2344444444443 68
Q ss_pred CCCeEEEEEecCCCcc-CCHHHHHHHH-HHHHHcCCcEEEec
Q 014320 196 GINSFKFFMAYKGSFM-INDELLIEGF-KRCKSLGALAMVHA 235 (427)
Q Consensus 196 g~~~ik~~~~~~~~~~-~~~~~l~~~~-~~a~~~g~~v~~H~ 235 (427)
|++.+-+.. +.... .+++.+.+-+ +.|+..++|+.+..
T Consensus 91 Gadavlv~~--P~y~~~~s~~~l~~~f~~va~a~~lPiilYn 130 (288)
T 2nuw_A 91 DILGVSSHS--PYYFPRLPEKFLAKYYEEIARISSHSLYIYN 130 (288)
T ss_dssp CCSEEEECC--CCSSCSCCHHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CCCEEEEcC--CcCCCCCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 999875532 22223 4666665544 55677799998873
No 290
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=22.49 E-value=2.7e+02 Score=24.15 Aligned_cols=45 Identities=9% Similarity=-0.092 Sum_probs=28.5
Q ss_pred HHHHHHHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcE-EEec
Q 014320 186 DEMEVMVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALA-MVHA 235 (427)
Q Consensus 186 ~~~~~l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v-~~H~ 235 (427)
.+..+.+++.|.+++.+..... .+..+.++.+.++++|+.+ .+|+
T Consensus 44 ~~~l~~~~~~G~~~vEl~~~~~-----~~~~~~~~~~~l~~~gl~~~~~~~ 89 (290)
T 2zvr_A 44 RKGMELAKRVGYQAVEIAVRDP-----SIVDWNEVKILSEELNLPICAIGT 89 (290)
T ss_dssp HHHHHHHHHHTCSEEEEECSCG-----GGSCHHHHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHHHhCCCEEEEcCCCc-----chhhHHHHHHHHHHcCCeEEEEec
Confidence 3333334478999988765321 1234566667777889988 7787
No 291
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=21.17 E-value=5.5e+02 Score=24.56 Aligned_cols=176 Identities=16% Similarity=0.135 Sum_probs=92.6
Q ss_pred hhHHHHHHHHHcCCceEEecCcCC--------CCCcHHHHHHHHHHHhccccceeceec----cccCCChhhHH-HHHHH
Q 014320 125 DDFFSGQAAALAGGTTMHIDFVIP--------INGSLTAGFEAYEKKAKNSCMDYGFHM----AITKWDEVVSD-EMEVM 191 (427)
Q Consensus 125 e~~~~~~~~~l~~GvTtv~d~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~l 191 (427)
++....++.....|+..+--.+.. ......+.++..++..++..+..-... +.....++..+ .++..
T Consensus 30 ~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~~~~~~l~~l~R~~N~~G~~~~~ddv~~~~v~~a 109 (464)
T 2nx9_A 30 DDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDVVDTFVERA 109 (464)
T ss_dssp GGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHhCCCCeEEEEeccccccCcccccchhhHHHHHHH
Confidence 333333556677799887642210 022455666666654333222211110 11112233333 34444
Q ss_pred HHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcE--EEecC-----ChhhHHHHHHHHHHcCCCCcc---cccc
Q 014320 192 VKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALA--MVHAE-----NGDAVFEGQKRMIELGITGPE---GHAL 261 (427)
Q Consensus 192 ~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v--~~H~e-----~~~~~~~~~~~l~~~G~~~~~---~~~~ 261 (427)
. ..|++.+.+|... .+.+.++..++.+++.|+.+ .+|.+ +.+.+....+.+.+.|..... ....
T Consensus 110 ~-~~Gvd~i~if~~~-----sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~DT~G~ 183 (464)
T 2nx9_A 110 V-KNGMDVFRVFDAM-----NDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALKDMAGI 183 (464)
T ss_dssp H-HTTCCEEEECCTT-----CCTHHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEEETTSC
T ss_pred H-hCCcCEEEEEEec-----CHHHHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEcCCCCC
Confidence 4 7899999887542 23478899999999999987 45544 234445555677788764321 1122
Q ss_pred cCCHHHHHHHHHHHHHHH-HhcCCCEE-EEcCCCHHHHHHHHHHhhcCCCEE
Q 014320 262 SRPPLLEGEATTRAIRLA-EFVNTPLY-VVHVMSMDAMEEIAKARKAGQRVI 311 (427)
Q Consensus 262 ~~p~~~e~~a~~~~~~~~-~~~g~~~~-i~H~~~~~~~~~i~~~~~~G~~v~ 311 (427)
..|.. +.+.+... +..+.+++ .+|-+..-++.-.-.+.+.|+..+
T Consensus 184 ~~P~~-----v~~lv~~l~~~~~~~i~~H~Hnd~GlAvAN~laAv~AGa~~V 230 (464)
T 2nx9_A 184 LTPYA-----AEELVSTLKKQVDVELHLHCHSTAGLADMTLLKAIEAGVDRV 230 (464)
T ss_dssp CCHHH-----HHHHHHHHHHHCCSCEEEEECCTTSCHHHHHHHHHHTTCSEE
T ss_pred cCHHH-----HHHHHHHHHHhcCCeEEEEECCCCChHHHHHHHHHHhCCCEE
Confidence 33332 22222222 22355543 356666555666666778898855
No 292
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=21.17 E-value=4.1e+02 Score=23.29 Aligned_cols=18 Identities=17% Similarity=0.119 Sum_probs=15.1
Q ss_pred CCCHHHHHHHHchhhhcC
Q 014320 409 QISVTDYVRLTSTEWGRL 426 (427)
Q Consensus 409 ~l~l~~~v~~~t~npA~~ 426 (427)
+++.++.-++...|++|+
T Consensus 268 ~l~~~~~~~i~~~Na~rl 285 (303)
T 4do7_A 268 RLSAAERSALWGGTAARC 285 (303)
T ss_dssp HCCHHHHHHHTTHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHH
Confidence 488888889999998874
No 293
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=20.96 E-value=3.8e+02 Score=22.65 Aligned_cols=39 Identities=10% Similarity=0.151 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCHHHHHHHHHHhhcCC
Q 014320 268 EGEATTRAIRLAEFVNTPLYVVHVMSMDAMEEIAKARKAGQ 308 (427)
Q Consensus 268 e~~a~~~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~ 308 (427)
+.......++++.+.+.++ +.|+.... .+.++.+++.+.
T Consensus 112 q~~~f~~~~~~a~~~~~Pv-~iH~~~a~-~~~~~il~~~~~ 150 (259)
T 1zzm_A 112 QQWLLDEQLKLAKRYDLPV-ILHSRRTH-DKLAMHLKRHDL 150 (259)
T ss_dssp HHHHHHHHHHHHHHTTCCE-EEEEESCH-HHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhCCcE-EEEecccH-HHHHHHHHhcCC
Confidence 4456778889999999987 56764432 244555565543
No 294
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=20.74 E-value=4.7e+02 Score=23.58 Aligned_cols=120 Identities=19% Similarity=0.204 Sum_probs=63.7
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEEecCCCc------cC-CHHHHHH---HHHHHHH-cCCcEEEecCChhhHHHHHHHHHH
Q 014320 182 EVVSDEMEVMVKEKGINSFKFFMAYKGSF------MI-NDELLIE---GFKRCKS-LGALAMVHAENGDAVFEGQKRMIE 250 (427)
Q Consensus 182 ~~~~~~~~~l~~~~g~~~ik~~~~~~~~~------~~-~~~~l~~---~~~~a~~-~g~~v~~H~e~~~~~~~~~~~l~~ 250 (427)
+..++..++++ +.|++.|.+......+. .+ .++++++ +++..++ .++++++=....+.++.+++
T Consensus 49 ~~al~~A~~~v-~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISIDT~~~~Va~aAl~---- 123 (314)
T 3tr9_A 49 NSALRTAEKMV-DEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISVDTSRPRVMREAVN---- 123 (314)
T ss_dssp HHHHHHHHHHH-HTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEEECSCHHHHHHHHH----
T ss_pred HHHHHHHHHHH-HCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeCCCHHHHHHHHH----
Confidence 34455556666 68888877765322211 11 2445443 3443333 47888887766665544432
Q ss_pred cCCCCcccccccCCHHHHHHHHHHHHHHHHhcCCCEEEEcCCCH------------------HHHHHHHHHhhcCCC---
Q 014320 251 LGITGPEGHALSRPPLLEGEATTRAIRLAEFVNTPLYVVHVMSM------------------DAMEEIAKARKAGQR--- 309 (427)
Q Consensus 251 ~G~~~~~~~~~~~p~~~e~~a~~~~~~~~~~~g~~~~i~H~~~~------------------~~~~~i~~~~~~G~~--- 309 (427)
.|..-........ ..+.+.+++++++++.+.|.... .-.+.++.+.+.|++
T Consensus 124 aGa~iINDVsg~~--------~~~m~~v~a~~g~~vVlMh~~G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~~GI~~~~ 195 (314)
T 3tr9_A 124 TGADMINDQRALQ--------LDDALTTVSALKTPVCLMHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKKAGISEDR 195 (314)
T ss_dssp HTCCEEEETTTTC--------STTHHHHHHHHTCCEEEECCCCTTCCTTSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGG
T ss_pred cCCCEEEECCCCC--------chHHHHHHHHhCCeEEEECCCCCCcccccccccchHHHHHHHHHHHHHHHHHcCCCHhH
Confidence 3432111110000 12345667788999999996421 113456777888984
Q ss_pred EEEec
Q 014320 310 VIGEP 314 (427)
Q Consensus 310 v~~~~ 314 (427)
+..++
T Consensus 196 IilDP 200 (314)
T 3tr9_A 196 IIIDP 200 (314)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 66544
No 295
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=20.44 E-value=2.5e+02 Score=24.05 Aligned_cols=15 Identities=33% Similarity=0.536 Sum_probs=7.5
Q ss_pred HHHHHHHHHHcCCcE
Q 014320 217 LIEGFKRCKSLGALA 231 (427)
Q Consensus 217 l~~~~~~a~~~g~~v 231 (427)
+++.++.|++.|.+.
T Consensus 86 ~~~~i~~A~~lG~~~ 100 (281)
T 3u0h_A 86 LPDRARLCARLGARS 100 (281)
T ss_dssp HHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHcCCCE
Confidence 344555555555543
No 296
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=20.41 E-value=4.3e+02 Score=23.07 Aligned_cols=22 Identities=9% Similarity=0.375 Sum_probs=13.2
Q ss_pred hHHHHHHHHHHcCCCeEEEEEec
Q 014320 184 VSDEMEVMVKEKGINSFKFFMAY 206 (427)
Q Consensus 184 ~~~~~~~l~~~~g~~~ik~~~~~ 206 (427)
..+.+..+. +.|++.+.+.+-+
T Consensus 34 ~~~~~~~l~-~~GaD~iElgiPf 55 (267)
T 3vnd_A 34 SLKIIQTLV-DNGADALELGFPF 55 (267)
T ss_dssp HHHHHHHHH-HTTCSSEEEECCC
T ss_pred HHHHHHHHH-HcCCCEEEECCCC
Confidence 344455554 6788888776533
No 297
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=20.26 E-value=4.4e+02 Score=26.45 Aligned_cols=111 Identities=13% Similarity=0.027 Sum_probs=62.7
Q ss_pred ChhhHHHHHHHHHcCCceEEe-cCcCCC----------C-CcHHHHHHHHHHHhccccceeceeccccCCChhhHHHHHH
Q 014320 123 TIDDFFSGQAAALAGGTTMHI-DFVIPI----------N-GSLTAGFEAYEKKAKNSCMDYGFHMAITKWDEVVSDEMEV 190 (427)
Q Consensus 123 ~~e~~~~~~~~~l~~GvTtv~-d~~~~~----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (427)
+-+....-...|.+.|+-.++ |.+... + ..+.+.++..++.+- .+..+..... -++.+++.-+
T Consensus 307 n~~~~k~yIDfAa~~G~~yvlvD~gW~~~~~~d~~~~~p~~di~~l~~Ya~~kgV----~i~lw~~~~~-~~~~~~~~~~ 381 (641)
T 3a24_A 307 NNPTYKAYIDFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAASKNV----GIILWAGYHA-FERDMENVCR 381 (641)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEECTTSBCTTSCCTTCBCTTCCHHHHHHHHHHTTC----EEEEEEEHHH-HHTSHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccccCCCCCccccCCcCCHHHHHHHHHhcCC----EEEEEeeCcc-hHHHHHHHHH
Confidence 445555556778889988776 543211 1 134555555554432 2222221111 1223343444
Q ss_pred HHHHcCCCeEEEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEe-cCChh
Q 014320 191 MVKEKGINSFKFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH-AENGD 239 (427)
Q Consensus 191 l~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H-~e~~~ 239 (427)
+.++.|+.++|+-.-.++. +..-+.+..+++.|.++++.|..| +.-+.
T Consensus 382 ~~~~~Gv~gvK~Df~~~~~-Q~~v~~y~~i~~~aA~~~l~V~fHg~~~P~ 430 (641)
T 3a24_A 382 HYAEMGVKGFKVDFMDRDD-QEMTAFNYRAAEMCAKYKLILDLHGTHKPA 430 (641)
T ss_dssp HHHHHTCCEEEEECCCCCS-HHHHHHHHHHHHHHHHTTCEEEECSCCCCT
T ss_pred HHHHcCCCEEEECCCCCCc-HHHHHHHHHHHHHHHHcCCEEEcCCCcCCC
Confidence 4447999999984433322 223456778999999999999999 44443
No 298
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A*
Probab=20.04 E-value=4.5e+02 Score=23.07 Aligned_cols=107 Identities=7% Similarity=-0.087 Sum_probs=52.2
Q ss_pred hhhHHHHHHHHHcCCceEEecCcCCCCCcHHHHH-HHHHHHh-ccccceeceecc-ccCCChhhHHHHHHHHHHcCCCeE
Q 014320 124 IDDFFSGQAAALAGGTTMHIDFVIPINGSLTAGF-EAYEKKA-KNSCMDYGFHMA-ITKWDEVVSDEMEVMVKEKGINSF 200 (427)
Q Consensus 124 ~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~g~~~i 200 (427)
.++.....+.|+..|++.+=....+.+ .+.+ +..+... .+..+.+..-.. .....+...+.+++-+++.|.+.|
T Consensus 37 ~~e~~~~v~~Al~~Gin~~DTA~~Ygs---E~~vG~~l~~~~~~r~~~~i~tk~~~~~~~~~~~~~~~e~SL~rL~~dyi 113 (290)
T 4gie_A 37 GAETANAVRWAIEAGYRHIDTAYIYSN---ERGVGQGIRESGVPREEVWVTTKVWNSDQGYEKTLAAFERSRELLGLEYI 113 (290)
T ss_dssp THHHHHHHHHHHHHTCCEEECCGGGTC---HHHHHHHHHHHCCCGGGSEEEEEECGGGCSHHHHHHHHHHHHHHHTCSCE
T ss_pred HHHHHHHHHHHHHcCCCEEecccccCC---HHHHHHHHHhcCCcchhccccccccccCCChHHHHHHHHHHHHHhCCCce
Confidence 345556678899999998632222222 2222 2222222 111111111011 111123344455554557788888
Q ss_pred EEEEecCCCccCCHHHHHHHHHHHHHcCCcEEEe
Q 014320 201 KFFMAYKGSFMINDELLIEGFKRCKSLGALAMVH 234 (427)
Q Consensus 201 k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H 234 (427)
.+++-. .+...+.++.-+.++.+++.|+.-.+=
T Consensus 114 Dly~lH-~p~~~~~~e~~~al~~l~~~Gkir~iG 146 (290)
T 4gie_A 114 DLYLIH-WPGKKKFVDTWKALEKLYEEKKVRAIG 146 (290)
T ss_dssp EEEEEC-CCCSSSHHHHHHHHHHHHHTTSEEEEE
T ss_pred eeEEec-CCCCCcchHHHHHHHHHHHCCCcceee
Confidence 887653 333344555556666777777654444
Done!