Query 014324
Match_columns 426
No_of_seqs 204 out of 2193
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 09:31:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014324.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014324hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rp8_A Flavoprotein monooxygen 100.0 3E-45 1E-49 354.8 33.4 343 4-382 21-372 (407)
2 4hb9_A Similarities with proba 100.0 1.7E-44 5.6E-49 350.2 37.4 356 7-378 2-382 (412)
3 2vou_A 2,6-dihydroxypyridine h 100.0 1.3E-43 4.5E-48 342.1 39.0 349 3-383 2-371 (397)
4 1pn0_A Phenol 2-monooxygenase; 100.0 2.7E-43 9.4E-48 358.6 30.2 387 6-419 8-460 (665)
5 2xdo_A TETX2 protein; tetracyc 100.0 7.2E-42 2.5E-46 330.1 36.5 359 1-380 21-385 (398)
6 3c96_A Flavin-containing monoo 100.0 9.5E-42 3.3E-46 330.5 31.2 342 5-375 3-367 (410)
7 2qa1_A PGAE, polyketide oxygen 100.0 8.1E-41 2.8E-45 330.5 33.6 335 4-381 9-350 (500)
8 2qa2_A CABE, polyketide oxygen 100.0 6.8E-41 2.3E-45 330.9 32.7 335 4-381 10-351 (499)
9 2x3n_A Probable FAD-dependent 100.0 2.8E-41 9.4E-46 326.3 24.9 344 1-382 1-361 (399)
10 2r0c_A REBC; flavin adenine di 100.0 1.3E-40 4.5E-45 333.1 26.2 348 1-382 21-383 (549)
11 3ihg_A RDME; flavoenzyme, anth 100.0 1.1E-39 3.8E-44 326.4 31.1 348 4-381 3-374 (535)
12 2dkh_A 3-hydroxybenzoate hydro 100.0 3E-40 1E-44 335.9 24.8 384 5-419 31-449 (639)
13 3alj_A 2-methyl-3-hydroxypyrid 100.0 4.5E-40 1.5E-44 315.5 23.6 326 4-377 9-347 (379)
14 3fmw_A Oxygenase; mithramycin, 100.0 5E-40 1.7E-44 328.9 24.5 339 5-382 48-396 (570)
15 1k0i_A P-hydroxybenzoate hydro 100.0 2.7E-39 9.2E-44 311.8 20.0 343 6-382 2-352 (394)
16 3oz2_A Digeranylgeranylglycero 100.0 7.4E-38 2.5E-42 301.7 29.2 338 4-380 2-350 (397)
17 3e1t_A Halogenase; flavoprotei 100.0 2.3E-36 8E-41 300.3 29.5 348 3-380 4-369 (512)
18 3atr_A Conserved archaeal prot 100.0 1.5E-35 5E-40 290.5 25.0 343 1-384 2-359 (453)
19 3cgv_A Geranylgeranyl reductas 100.0 5.9E-34 2E-38 274.7 33.5 340 4-383 2-353 (397)
20 3nix_A Flavoprotein/dehydrogen 100.0 1.2E-34 4E-39 281.9 26.9 336 4-368 3-347 (421)
21 3i3l_A Alkylhalidase CMLS; fla 100.0 1.4E-34 4.9E-39 289.9 28.0 343 4-377 21-378 (591)
22 3c4a_A Probable tryptophan hyd 100.0 2E-36 6.7E-41 290.2 13.3 323 7-383 1-334 (381)
23 2pyx_A Tryptophan halogenase; 100.0 3.5E-32 1.2E-36 271.2 28.3 331 1-374 2-409 (526)
24 2gmh_A Electron transfer flavo 100.0 4.2E-32 1.4E-36 272.8 23.6 342 6-381 35-426 (584)
25 2aqj_A Tryptophan halogenase, 100.0 1.8E-29 6.3E-34 252.3 28.8 324 4-373 3-392 (538)
26 2weu_A Tryptophan 5-halogenase 100.0 3E-29 1E-33 249.6 26.6 323 7-375 3-402 (511)
27 2e4g_A Tryptophan halogenase; 100.0 3E-29 1E-33 251.1 25.5 329 5-378 24-428 (550)
28 3ihm_A Styrene monooxygenase A 100.0 1.6E-28 5.6E-33 238.6 19.5 326 6-376 22-374 (430)
29 2bry_A NEDD9 interacting prote 99.9 5.4E-23 1.8E-27 202.9 20.0 142 5-177 91-236 (497)
30 1yvv_A Amine oxidase, flavin-c 99.8 1.7E-16 5.9E-21 148.8 24.3 151 7-176 3-167 (336)
31 2gag_B Heterotetrameric sarcos 99.6 3.7E-14 1.3E-18 136.5 17.9 211 108-364 172-390 (405)
32 1ryi_A Glycine oxidase; flavop 99.6 5.8E-14 2E-18 134.0 17.0 208 106-363 160-377 (382)
33 3kkj_A Amine oxidase, flavin-c 99.5 4.5E-14 1.5E-18 128.4 11.5 36 7-42 3-38 (336)
34 2qcu_A Aerobic glycerol-3-phos 99.5 2.7E-12 9.4E-17 126.7 23.3 68 107-176 146-216 (501)
35 1y56_B Sarcosine oxidase; dehy 99.5 7.4E-13 2.5E-17 126.3 18.5 38 1-39 1-38 (382)
36 3dme_A Conserved exported prot 99.5 1.1E-12 3.8E-17 124.3 17.2 67 107-177 147-216 (369)
37 3ps9_A TRNA 5-methylaminomethy 99.5 2.6E-12 8.8E-17 131.6 20.4 59 107-172 414-474 (676)
38 2gf3_A MSOX, monomeric sarcosi 99.4 8.3E-12 2.8E-16 119.2 21.3 37 6-42 3-39 (389)
39 3nyc_A D-arginine dehydrogenas 99.4 2.1E-12 7.3E-17 122.9 16.6 63 107-177 151-216 (381)
40 3pvc_A TRNA 5-methylaminomethy 99.4 3.7E-12 1.3E-16 130.6 18.9 59 107-172 409-470 (689)
41 3da1_A Glycerol-3-phosphate de 99.4 1.3E-11 4.3E-16 123.4 22.2 71 107-178 167-240 (561)
42 3v76_A Flavoprotein; structura 99.4 6.2E-14 2.1E-18 134.7 4.3 144 4-171 25-187 (417)
43 3jsk_A Cypbp37 protein; octame 99.4 3.9E-12 1.3E-16 117.3 15.1 144 5-177 78-257 (344)
44 1rp0_A ARA6, thiazole biosynth 99.4 1.7E-12 6E-17 118.4 12.4 143 5-177 38-197 (284)
45 2gv8_A Monooxygenase; FMO, FAD 99.4 2.4E-12 8.4E-17 125.4 14.0 162 1-174 1-180 (447)
46 2i0z_A NAD(FAD)-utilizing dehy 99.4 9E-13 3.1E-17 128.3 8.7 164 5-178 25-209 (447)
47 2oln_A NIKD protein; flavoprot 99.4 5.9E-11 2E-15 113.7 21.3 37 6-42 4-40 (397)
48 1qo8_A Flavocytochrome C3 fuma 99.4 4.4E-12 1.5E-16 127.1 13.2 164 5-177 120-318 (566)
49 3dje_A Fructosyl amine: oxygen 99.4 3.3E-12 1.1E-16 124.1 11.9 42 1-42 1-43 (438)
50 1y0p_A Fumarate reductase flav 99.3 7.9E-12 2.7E-16 125.5 14.3 162 5-175 125-321 (571)
51 3i6d_A Protoporphyrinogen oxid 99.3 3.3E-10 1.1E-14 111.0 24.9 66 1-67 1-84 (470)
52 3nrn_A Uncharacterized protein 99.3 1.3E-10 4.3E-15 112.3 20.6 37 7-43 1-37 (421)
53 4dgk_A Phytoene dehydrogenase; 99.3 1.4E-10 4.8E-15 114.6 19.6 37 7-43 2-38 (501)
54 3nlc_A Uncharacterized protein 99.3 5.5E-11 1.9E-15 117.4 16.2 36 6-41 107-142 (549)
55 2gjc_A Thiazole biosynthetic e 99.3 2.7E-11 9.3E-16 111.1 12.9 144 5-177 64-245 (326)
56 3axb_A Putative oxidoreductase 99.3 2E-10 6.8E-15 111.9 19.9 38 4-41 21-59 (448)
57 4a9w_A Monooxygenase; baeyer-v 99.3 1.7E-11 5.9E-16 115.4 11.9 130 5-173 2-134 (357)
58 1chu_A Protein (L-aspartate ox 99.3 8.2E-12 2.8E-16 124.1 9.7 41 1-42 1-43 (540)
59 2cul_A Glucose-inhibited divis 99.3 2E-11 6.9E-16 107.9 10.8 127 5-177 2-131 (232)
60 3qj4_A Renalase; FAD/NAD(P)-bi 99.3 2.5E-10 8.5E-15 107.0 18.9 36 7-42 2-40 (342)
61 2gqf_A Hypothetical protein HI 99.3 1.5E-11 5.2E-16 117.6 10.2 145 5-171 3-168 (401)
62 2xve_A Flavin-containing monoo 99.3 7.3E-11 2.5E-15 115.3 15.1 154 7-175 3-170 (464)
63 2zbw_A Thioredoxin reductase; 99.2 3.3E-11 1.1E-15 112.7 11.6 124 1-176 1-126 (335)
64 3gwf_A Cyclohexanone monooxyge 99.2 2.8E-11 9.6E-16 120.1 11.4 138 5-174 7-150 (540)
65 1kf6_A Fumarate reductase flav 99.2 6.8E-11 2.3E-15 118.9 14.1 169 4-177 3-203 (602)
66 4at0_A 3-ketosteroid-delta4-5a 99.2 6.1E-11 2.1E-15 117.3 13.6 39 5-43 40-78 (510)
67 3ka7_A Oxidoreductase; structu 99.2 1.5E-09 5.1E-14 104.9 22.9 37 7-43 1-37 (425)
68 1w4x_A Phenylacetone monooxyge 99.2 5.3E-11 1.8E-15 118.6 12.6 138 5-174 15-157 (542)
69 3uox_A Otemo; baeyer-villiger 99.2 4.4E-11 1.5E-15 118.9 11.8 140 4-174 7-150 (545)
70 3ab1_A Ferredoxin--NADP reduct 99.2 4.9E-11 1.7E-15 112.7 11.6 122 5-176 13-136 (360)
71 3ces_A MNMG, tRNA uridine 5-ca 99.2 9.2E-11 3.2E-15 116.8 13.5 154 5-176 27-186 (651)
72 2ywl_A Thioredoxin reductase r 99.2 7.2E-11 2.5E-15 99.9 11.0 113 7-177 2-116 (180)
73 4ap3_A Steroid monooxygenase; 99.2 8.4E-11 2.9E-15 117.0 12.1 139 5-174 20-162 (549)
74 1d4d_A Flavocytochrome C fumar 99.2 1.3E-10 4.5E-15 116.4 13.2 165 5-176 125-322 (572)
75 2wdq_A Succinate dehydrogenase 99.2 2.1E-10 7E-15 115.1 13.7 64 110-173 143-208 (588)
76 3c4n_A Uncharacterized protein 99.2 1.2E-11 4.1E-16 118.8 4.6 37 6-42 36-74 (405)
77 2zxi_A TRNA uridine 5-carboxym 99.1 4E-10 1.4E-14 111.8 14.6 154 5-176 26-185 (637)
78 2h88_A Succinate dehydrogenase 99.1 6.2E-10 2.1E-14 111.9 15.4 163 6-173 18-219 (621)
79 4fk1_A Putative thioredoxin re 99.1 4.8E-10 1.6E-14 103.3 13.4 37 3-39 3-39 (304)
80 3lov_A Protoporphyrinogen oxid 99.1 4.3E-08 1.5E-12 96.0 28.2 63 4-66 2-78 (475)
81 1c0p_A D-amino acid oxidase; a 99.1 2.2E-09 7.4E-14 101.5 18.1 39 1-40 2-40 (363)
82 2uzz_A N-methyl-L-tryptophan o 99.1 2.2E-10 7.5E-15 108.7 11.0 36 6-41 2-37 (372)
83 2bs2_A Quinol-fumarate reducta 99.1 3.3E-10 1.1E-14 114.7 12.4 62 111-173 159-222 (660)
84 3cp8_A TRNA uridine 5-carboxym 99.1 4.4E-10 1.5E-14 111.9 12.9 149 5-174 20-177 (641)
85 1vdc_A NTR, NADPH dependent th 99.1 1.1E-10 3.9E-15 108.9 8.3 119 4-173 6-126 (333)
86 3f8d_A Thioredoxin reductase ( 99.1 3.1E-10 1.1E-14 105.2 10.9 110 6-172 15-126 (323)
87 3s5w_A L-ornithine 5-monooxyge 99.1 5.8E-10 2E-14 109.0 12.3 151 6-172 30-193 (463)
88 3lzw_A Ferredoxin--NADP reduct 99.1 1.7E-10 5.7E-15 107.5 8.0 120 1-171 1-123 (332)
89 3fbs_A Oxidoreductase; structu 99.1 9.8E-10 3.3E-14 100.6 13.0 110 7-173 3-114 (297)
90 3itj_A Thioredoxin reductase 1 99.1 3.1E-10 1.1E-14 106.0 9.3 121 5-172 21-143 (338)
91 2rgh_A Alpha-glycerophosphate 99.0 3.6E-08 1.2E-12 98.6 24.0 37 5-41 31-67 (571)
92 3gyx_A Adenylylsulfate reducta 99.0 3.5E-10 1.2E-14 114.4 9.1 62 112-173 168-235 (662)
93 2q0l_A TRXR, thioredoxin reduc 99.0 9.2E-10 3.2E-14 101.6 10.9 113 7-174 2-117 (311)
94 4gut_A Lysine-specific histone 99.0 2.1E-08 7.2E-13 103.2 21.0 39 5-43 335-373 (776)
95 3d1c_A Flavin-containing putat 99.0 8.7E-10 3E-14 104.3 10.0 138 4-172 2-144 (369)
96 2q7v_A Thioredoxin reductase; 99.0 1.3E-09 4.6E-14 101.2 10.4 115 5-172 7-124 (325)
97 2e5v_A L-aspartate oxidase; ar 99.0 1.1E-09 3.9E-14 106.9 9.7 31 8-38 1-31 (472)
98 1fl2_A Alkyl hydroperoxide red 99.0 2.1E-09 7.2E-14 99.1 10.5 113 6-172 1-116 (310)
99 3cty_A Thioredoxin reductase; 99.0 2.6E-09 9E-14 98.9 10.9 110 6-172 16-127 (319)
100 1jnr_A Adenylylsulfate reducta 98.9 5.6E-09 1.9E-13 105.9 13.4 36 6-41 22-61 (643)
101 4a5l_A Thioredoxin reductase; 98.9 3.6E-09 1.2E-13 97.7 10.8 35 6-40 4-38 (314)
102 2a87_A TRXR, TR, thioredoxin r 98.9 2.1E-09 7.1E-14 100.4 9.2 34 5-38 13-46 (335)
103 2a8x_A Dihydrolipoyl dehydroge 98.9 2.1E-09 7.2E-14 105.1 8.6 34 5-38 2-35 (464)
104 1hyu_A AHPF, alkyl hydroperoxi 98.9 6.1E-09 2.1E-13 103.1 11.6 115 4-172 210-327 (521)
105 1trb_A Thioredoxin reductase; 98.9 3.7E-09 1.3E-13 97.9 9.2 35 4-38 3-37 (320)
106 1pj5_A N,N-dimethylglycine oxi 98.9 1.8E-09 6.1E-14 113.1 7.7 37 5-41 3-40 (830)
107 4b63_A L-ornithine N5 monooxyg 98.9 7.1E-09 2.4E-13 102.1 11.4 65 106-170 141-213 (501)
108 3k7m_X 6-hydroxy-L-nicotine ox 98.9 1.3E-08 4.3E-13 98.5 12.6 37 7-43 2-38 (431)
109 2ivd_A PPO, PPOX, protoporphyr 98.8 1E-08 3.6E-13 100.5 10.9 66 1-66 11-88 (478)
110 4gcm_A TRXR, thioredoxin reduc 98.8 1.8E-08 6.3E-13 92.9 11.9 38 1-39 2-39 (312)
111 1v59_A Dihydrolipoamide dehydr 98.8 4.9E-09 1.7E-13 102.9 6.8 37 5-41 4-40 (478)
112 3r9u_A Thioredoxin reductase; 98.8 4.7E-08 1.6E-12 90.1 13.0 112 5-170 3-117 (315)
113 1dxl_A Dihydrolipoamide dehydr 98.8 4.1E-09 1.4E-13 103.2 5.8 39 4-42 4-42 (470)
114 3urh_A Dihydrolipoyl dehydroge 98.8 7.5E-09 2.6E-13 101.9 6.8 38 4-41 23-60 (491)
115 1ojt_A Surface protein; redox- 98.8 5.1E-09 1.7E-13 102.8 5.6 36 6-41 6-41 (482)
116 3qfa_A Thioredoxin reductase 1 98.8 9.2E-09 3.1E-13 101.8 7.3 37 4-40 30-66 (519)
117 3o0h_A Glutathione reductase; 98.7 3.2E-08 1.1E-12 97.2 10.6 34 5-38 25-58 (484)
118 3lad_A Dihydrolipoamide dehydr 98.7 2.4E-08 8.2E-13 97.9 8.9 38 5-42 2-39 (476)
119 3l8k_A Dihydrolipoyl dehydroge 98.7 5.1E-08 1.7E-12 95.2 11.1 37 6-42 4-40 (466)
120 3iwa_A FAD-dependent pyridine 98.7 5.1E-08 1.8E-12 95.4 10.7 37 6-42 3-41 (472)
121 3g3e_A D-amino-acid oxidase; F 98.6 4.1E-09 1.4E-13 99.0 1.0 35 7-41 1-41 (351)
122 1zmd_A Dihydrolipoyl dehydroge 98.6 1.9E-08 6.4E-13 98.6 5.7 37 5-41 5-41 (474)
123 3fpz_A Thiazole biosynthetic e 98.6 2E-08 6.8E-13 93.4 4.8 39 5-43 64-104 (326)
124 3pl8_A Pyranose 2-oxidase; sub 98.6 1.1E-06 3.7E-11 88.6 17.6 38 5-42 45-82 (623)
125 2qae_A Lipoamide, dihydrolipoy 98.6 3.7E-08 1.3E-12 96.3 6.5 36 6-41 2-37 (468)
126 3lxd_A FAD-dependent pyridine 98.6 6.3E-08 2.2E-12 93.1 7.9 38 4-41 7-46 (415)
127 3dgz_A Thioredoxin reductase 2 98.6 7.4E-08 2.5E-12 94.7 8.4 36 4-39 4-39 (488)
128 3h8l_A NADH oxidase; membrane 98.6 2.4E-07 8.2E-12 88.9 11.5 34 7-40 2-38 (409)
129 3ics_A Coenzyme A-disulfide re 98.6 2.2E-07 7.6E-12 93.5 11.3 115 4-170 34-151 (588)
130 1q1r_A Putidaredoxin reductase 98.6 1E-07 3.6E-12 92.0 8.4 36 6-41 4-41 (431)
131 2yqu_A 2-oxoglutarate dehydrog 98.6 5.3E-08 1.8E-12 94.8 6.3 36 6-41 1-36 (455)
132 2bc0_A NADH oxidase; flavoprot 98.6 2.3E-07 7.7E-12 91.2 10.8 37 5-41 34-73 (490)
133 1ebd_A E3BD, dihydrolipoamide 98.6 4.3E-08 1.5E-12 95.5 5.6 33 6-38 3-35 (455)
134 3cgb_A Pyridine nucleotide-dis 98.5 2.9E-07 1E-11 90.2 10.7 35 7-41 37-73 (480)
135 3kd9_A Coenzyme A disulfide re 98.5 1.8E-07 6.1E-12 90.9 8.3 37 5-41 2-40 (449)
136 2hqm_A GR, grase, glutathione 98.5 1.1E-07 3.6E-12 93.3 6.6 35 5-39 10-44 (479)
137 3klj_A NAD(FAD)-dependent dehy 98.5 3.4E-07 1.2E-11 86.9 9.8 38 5-42 8-45 (385)
138 1nhp_A NADH peroxidase; oxidor 98.5 4.8E-07 1.6E-11 87.8 11.1 35 7-41 1-37 (447)
139 3sx6_A Sulfide-quinone reducta 98.5 7.9E-08 2.7E-12 93.1 5.4 38 1-40 1-41 (437)
140 2cdu_A NADPH oxidase; flavoenz 98.5 1.1E-07 3.8E-12 92.5 6.3 35 7-41 1-37 (452)
141 1v0j_A UDP-galactopyranose mut 98.5 1E-07 3.5E-12 91.1 5.5 43 1-43 1-45 (399)
142 3oc4_A Oxidoreductase, pyridin 98.5 7.9E-07 2.7E-11 86.4 11.8 36 7-42 3-40 (452)
143 2b9w_A Putative aminooxidase; 98.5 1.5E-07 5.1E-12 90.7 6.1 67 1-67 1-80 (424)
144 1zk7_A HGII, reductase, mercur 98.5 9E-07 3.1E-11 86.4 11.6 34 5-38 3-36 (467)
145 1m6i_A Programmed cell death p 98.5 5.4E-07 1.8E-11 88.5 10.1 38 5-42 10-49 (493)
146 4gde_A UDP-galactopyranose mut 98.4 9.4E-08 3.2E-12 94.5 4.6 38 6-43 10-48 (513)
147 2gqw_A Ferredoxin reductase; f 98.4 5.9E-07 2E-11 86.1 10.0 37 5-41 6-44 (408)
148 3dgh_A TRXR-1, thioredoxin red 98.4 3.1E-07 1.1E-11 90.1 8.1 34 5-38 8-41 (483)
149 3hyw_A Sulfide-quinone reducta 98.4 7.2E-07 2.5E-11 86.1 9.7 33 8-40 4-38 (430)
150 1y56_A Hypothetical protein PH 98.4 4.6E-07 1.6E-11 89.0 8.5 111 6-171 108-219 (493)
151 3ntd_A FAD-dependent pyridine 98.4 8.8E-07 3E-11 88.7 10.6 36 7-42 2-39 (565)
152 1xdi_A RV3303C-LPDA; reductase 98.4 2.2E-07 7.7E-12 91.5 6.2 34 6-39 2-38 (499)
153 1rsg_A FMS1 protein; FAD bindi 98.4 1.4E-07 4.7E-12 93.5 4.3 41 3-43 5-46 (516)
154 2bcg_G Secretory pathway GDP d 98.4 2.4E-07 8.2E-12 90.1 5.9 39 5-43 10-48 (453)
155 3h28_A Sulfide-quinone reducta 98.4 9E-07 3.1E-11 85.4 9.5 35 7-41 3-39 (430)
156 4eqs_A Coenzyme A disulfide re 98.4 1.2E-06 4.1E-11 84.7 10.3 35 7-41 1-37 (437)
157 2eq6_A Pyruvate dehydrogenase 98.4 1E-06 3.5E-11 85.9 9.4 102 7-174 170-274 (464)
158 3ef6_A Toluene 1,2-dioxygenase 98.4 2.1E-06 7.2E-11 82.3 11.4 36 7-42 3-40 (410)
159 2yg5_A Putrescine oxidase; oxi 98.3 2.3E-07 7.9E-12 90.2 4.5 65 3-67 2-78 (453)
160 3fg2_P Putative rubredoxin red 98.3 4.9E-06 1.7E-10 79.5 13.6 35 7-41 2-38 (404)
161 4dsg_A UDP-galactopyranose mut 98.3 4.7E-07 1.6E-11 88.7 5.8 42 1-42 4-46 (484)
162 2v3a_A Rubredoxin reductase; a 98.3 1.8E-06 6.1E-11 82.0 9.6 100 6-174 145-246 (384)
163 1v59_A Dihydrolipoamide dehydr 98.3 3.6E-06 1.2E-10 82.4 12.0 107 6-174 183-290 (478)
164 2e1m_A L-glutamate oxidase; L- 98.3 5E-07 1.7E-11 84.8 5.5 38 5-42 43-81 (376)
165 4b1b_A TRXR, thioredoxin reduc 98.3 7.9E-07 2.7E-11 87.9 6.6 36 6-41 42-77 (542)
166 2eq6_A Pyruvate dehydrogenase 98.3 4.5E-07 1.5E-11 88.4 4.5 39 1-39 1-39 (464)
167 2x8g_A Thioredoxin glutathione 98.3 2.9E-06 9.9E-11 85.5 10.4 34 5-38 106-139 (598)
168 2yqu_A 2-oxoglutarate dehydrog 98.3 2.2E-06 7.4E-11 83.4 9.1 99 6-173 167-266 (455)
169 2jae_A L-amino acid oxidase; o 98.2 8.4E-07 2.9E-11 87.2 5.9 39 5-43 10-48 (489)
170 3hdq_A UDP-galactopyranose mut 98.2 8.9E-07 3E-11 83.8 5.7 39 5-43 28-66 (397)
171 1sez_A Protoporphyrinogen oxid 98.2 1.2E-06 4E-11 86.5 6.7 61 6-66 13-85 (504)
172 1s3e_A Amine oxidase [flavin-c 98.2 7.9E-07 2.7E-11 88.1 5.2 63 5-67 3-78 (520)
173 4dna_A Probable glutathione re 98.2 8.3E-07 2.8E-11 86.5 5.2 33 5-37 4-36 (463)
174 3dk9_A Grase, GR, glutathione 98.2 7.4E-07 2.5E-11 87.3 4.5 36 3-38 17-52 (478)
175 3vrd_B FCCB subunit, flavocyto 98.2 4.6E-06 1.6E-10 79.6 9.9 34 7-40 3-38 (401)
176 2bi7_A UDP-galactopyranose mut 98.2 1E-06 3.4E-11 83.7 5.1 38 5-42 2-39 (384)
177 1xhc_A NADH oxidase /nitrite r 98.2 4.3E-06 1.5E-10 78.8 8.9 34 7-41 9-42 (367)
178 3nks_A Protoporphyrinogen oxid 98.1 1.2E-06 3.9E-11 85.8 4.5 37 7-43 3-41 (477)
179 3s5w_A L-ornithine 5-monooxyge 98.1 1.9E-05 6.4E-10 76.9 12.9 145 6-172 227-378 (463)
180 2iid_A L-amino-acid oxidase; f 98.1 3.7E-06 1.3E-10 82.7 7.7 39 5-43 32-70 (498)
181 1ges_A Glutathione reductase; 98.1 6.7E-06 2.3E-10 79.8 9.3 101 6-174 167-268 (450)
182 2vvm_A Monoamine oxidase N; FA 98.1 1.5E-06 5.1E-11 85.5 4.7 60 7-66 40-111 (495)
183 1i8t_A UDP-galactopyranose mut 98.1 1.6E-06 5.4E-11 81.8 4.7 37 7-43 2-38 (367)
184 4g6h_A Rotenone-insensitive NA 98.1 1E-05 3.4E-10 79.5 10.4 36 5-40 41-76 (502)
185 3ic9_A Dihydrolipoamide dehydr 98.1 1.2E-06 4.2E-11 86.0 3.7 34 6-39 8-41 (492)
186 1dxl_A Dihydrolipoamide dehydr 98.1 9.1E-06 3.1E-10 79.3 9.5 104 6-173 177-281 (470)
187 3urh_A Dihydrolipoyl dehydroge 98.1 1.6E-05 5.3E-10 78.1 11.1 104 6-173 198-302 (491)
188 2vdc_G Glutamate synthase [NAD 98.1 2.8E-06 9.6E-11 82.4 5.6 38 5-42 121-158 (456)
189 1nhp_A NADH peroxidase; oxidor 98.1 1.7E-05 5.9E-10 76.8 10.8 99 5-173 148-248 (447)
190 2r9z_A Glutathione amide reduc 98.0 1.7E-05 5.7E-10 77.2 10.2 100 6-173 166-266 (463)
191 3ic9_A Dihydrolipoamide dehydr 98.0 2.8E-05 9.4E-10 76.3 11.8 102 6-173 174-276 (492)
192 2r9z_A Glutathione amide reduc 98.0 4E-06 1.4E-10 81.6 5.3 34 5-38 3-36 (463)
193 3p1w_A Rabgdi protein; GDI RAB 98.0 4.1E-06 1.4E-10 81.0 5.2 39 5-43 19-57 (475)
194 1d5t_A Guanine nucleotide diss 98.0 5.2E-06 1.8E-10 80.1 6.0 39 5-43 5-43 (433)
195 1lvl_A Dihydrolipoamide dehydr 98.0 1E-05 3.5E-10 78.7 8.0 99 6-173 171-270 (458)
196 1zmd_A Dihydrolipoyl dehydroge 98.0 2.2E-05 7.5E-10 76.7 10.3 105 7-173 179-284 (474)
197 1ges_A Glutathione reductase; 98.0 3.5E-06 1.2E-10 81.8 4.4 34 5-38 3-36 (450)
198 3g5s_A Methylenetetrahydrofola 98.0 5.8E-06 2E-10 76.8 5.5 35 7-41 2-36 (443)
199 2hqm_A GR, grase, glutathione 98.0 2.5E-05 8.5E-10 76.4 10.3 102 6-173 185-287 (479)
200 1mo9_A ORF3; nucleotide bindin 98.0 5.9E-06 2E-10 81.7 5.7 37 5-41 42-78 (523)
201 1trb_A Thioredoxin reductase; 98.0 3.1E-05 1.1E-09 71.2 10.3 102 6-173 145-249 (320)
202 1ebd_A E3BD, dihydrolipoamide 98.0 3.9E-05 1.3E-09 74.5 11.4 102 6-173 170-272 (455)
203 1onf_A GR, grase, glutathione 98.0 5.9E-06 2E-10 81.3 5.2 34 6-39 2-35 (500)
204 2a8x_A Dihydrolipoyl dehydroge 97.9 3E-05 1E-09 75.4 10.2 102 6-173 171-273 (464)
205 3k30_A Histamine dehydrogenase 97.9 7.1E-06 2.4E-10 84.0 5.6 38 5-42 390-427 (690)
206 2qae_A Lipoamide, dihydrolipoy 97.9 3.3E-05 1.1E-09 75.2 10.1 103 6-173 174-278 (468)
207 3ef6_A Toluene 1,2-dioxygenase 97.9 2.2E-05 7.6E-10 75.1 8.2 99 6-173 143-243 (410)
208 1lvl_A Dihydrolipoamide dehydr 97.9 6.8E-06 2.3E-10 79.9 4.6 34 4-37 3-36 (458)
209 1ojt_A Surface protein; redox- 97.9 3.4E-05 1.1E-09 75.5 9.5 101 6-173 185-288 (482)
210 1lqt_A FPRA; NADP+ derivative, 97.9 6.9E-06 2.3E-10 79.7 4.5 38 4-41 1-45 (456)
211 1fec_A Trypanothione reductase 97.9 9.3E-06 3.2E-10 79.6 5.0 33 5-37 2-35 (490)
212 1onf_A GR, grase, glutathione 97.8 7.1E-05 2.4E-09 73.5 10.9 101 6-173 176-277 (500)
213 3lxd_A FAD-dependent pyridine 97.8 5.9E-05 2E-09 72.3 10.0 100 6-173 152-253 (415)
214 1o94_A Tmadh, trimethylamine d 97.8 1.4E-05 4.7E-10 82.3 5.8 38 5-42 388-425 (729)
215 1kdg_A CDH, cellobiose dehydro 97.8 1.3E-05 4.5E-10 79.8 5.4 38 4-41 5-42 (546)
216 1b37_A Protein (polyamine oxid 97.8 1.3E-05 4.3E-10 78.3 5.0 39 5-43 3-42 (472)
217 2wpf_A Trypanothione reductase 97.8 1.2E-05 4.3E-10 78.8 4.9 32 6-37 7-39 (495)
218 1q1r_A Putidaredoxin reductase 97.8 7.7E-05 2.6E-09 71.8 10.4 101 6-172 149-251 (431)
219 2q0l_A TRXR, thioredoxin reduc 97.8 0.00023 7.7E-09 65.1 13.1 98 6-172 143-242 (311)
220 3fg2_P Putative rubredoxin red 97.8 5.2E-05 1.8E-09 72.4 9.0 100 6-173 142-243 (404)
221 3dk9_A Grase, GR, glutathione 97.8 0.00012 4.1E-09 71.5 11.7 105 7-173 188-295 (478)
222 2z3y_A Lysine-specific histone 97.8 1.4E-05 4.9E-10 81.3 5.2 39 5-43 106-144 (662)
223 2xag_A Lysine-specific histone 97.8 1.7E-05 5.7E-10 82.3 5.7 39 5-43 277-315 (852)
224 1mo9_A ORF3; nucleotide bindin 97.8 7.8E-05 2.7E-09 73.7 10.2 102 7-174 215-319 (523)
225 3dgh_A TRXR-1, thioredoxin red 97.8 0.00014 4.9E-09 71.0 12.0 104 6-173 187-291 (483)
226 1fl2_A Alkyl hydroperoxide red 97.8 0.00021 7.3E-09 65.2 12.4 99 6-172 144-243 (310)
227 3dgz_A Thioredoxin reductase 2 97.8 0.00018 6.2E-09 70.4 12.6 104 6-173 185-289 (488)
228 2v3a_A Rubredoxin reductase; a 97.8 1.6E-05 5.6E-10 75.3 5.0 35 5-39 3-39 (384)
229 1xdi_A RV3303C-LPDA; reductase 97.8 7.9E-05 2.7E-09 73.2 9.7 99 6-173 182-281 (499)
230 3itj_A Thioredoxin reductase 1 97.8 0.00016 5.6E-09 66.8 11.3 98 6-171 173-271 (338)
231 1ps9_A 2,4-dienoyl-COA reducta 97.8 2E-05 7E-10 80.4 5.5 37 5-41 372-408 (671)
232 2gqw_A Ferredoxin reductase; f 97.8 9E-05 3.1E-09 70.8 9.6 95 6-172 145-240 (408)
233 1fec_A Trypanothione reductase 97.7 0.0001 3.5E-09 72.2 10.0 100 6-173 187-290 (490)
234 2wpf_A Trypanothione reductase 97.7 0.00011 3.6E-09 72.2 10.0 99 7-173 192-294 (495)
235 3lad_A Dihydrolipoamide dehydr 97.7 0.00014 4.9E-09 70.9 10.6 103 6-174 180-283 (476)
236 1gte_A Dihydropyrimidine dehyd 97.7 2.4E-05 8.3E-10 83.5 5.5 37 6-42 187-224 (1025)
237 3ntd_A FAD-dependent pyridine 97.7 0.00014 4.9E-09 72.6 10.7 35 7-41 152-186 (565)
238 3iwa_A FAD-dependent pyridine 97.7 7.7E-05 2.6E-09 72.8 8.3 98 6-172 159-259 (472)
239 2q7v_A Thioredoxin reductase; 97.7 0.00032 1.1E-08 64.5 12.2 97 7-172 153-250 (325)
240 3cgb_A Pyridine nucleotide-dis 97.7 7.3E-05 2.5E-09 73.1 8.0 37 5-41 185-221 (480)
241 3cty_A Thioredoxin reductase; 97.7 0.00029 1E-08 64.6 11.6 97 7-172 156-253 (319)
242 1xhc_A NADH oxidase /nitrite r 97.7 5.8E-05 2E-09 71.0 6.9 35 7-41 144-178 (367)
243 1vdc_A NTR, NADPH dependent th 97.7 0.00046 1.6E-08 63.7 13.0 101 6-173 159-261 (333)
244 1cjc_A Protein (adrenodoxin re 97.7 3.2E-05 1.1E-09 75.1 5.1 37 5-41 5-43 (460)
245 3oc4_A Oxidoreductase, pyridin 97.7 0.00025 8.7E-09 68.6 11.5 98 6-173 147-246 (452)
246 3qfa_A Thioredoxin reductase 1 97.7 0.0004 1.4E-08 68.5 13.1 103 7-173 211-317 (519)
247 2gag_A Heterotetrameric sarcos 97.7 2.9E-05 9.9E-10 82.3 4.9 37 6-42 128-164 (965)
248 3l8k_A Dihydrolipoyl dehydroge 97.7 0.00019 6.5E-09 69.8 10.3 101 6-174 172-275 (466)
249 2zbw_A Thioredoxin reductase; 97.6 0.00028 9.5E-09 65.2 11.0 101 6-172 152-253 (335)
250 3t37_A Probable dehydrogenase; 97.6 2.9E-05 9.8E-10 76.9 4.3 37 5-41 16-53 (526)
251 3f8d_A Thioredoxin reductase ( 97.6 0.00045 1.5E-08 63.2 11.9 98 6-172 154-252 (323)
252 2bc0_A NADH oxidase; flavoprot 97.6 0.00025 8.5E-09 69.5 10.6 36 6-41 194-229 (490)
253 2cdu_A NADPH oxidase; flavoenz 97.6 0.00018 6.2E-09 69.6 9.6 99 6-173 149-249 (452)
254 1zk7_A HGII, reductase, mercur 97.6 0.00014 4.9E-09 70.7 8.5 98 6-174 176-274 (467)
255 1m6i_A Programmed cell death p 97.6 0.00027 9.2E-09 69.3 10.1 98 6-172 180-283 (493)
256 1ju2_A HydroxynitrIle lyase; f 97.6 2.6E-05 9E-10 77.2 2.9 36 5-41 25-60 (536)
257 3ab1_A Ferredoxin--NADP reduct 97.6 0.00011 3.6E-09 68.9 6.9 100 7-172 164-264 (360)
258 3ayj_A Pro-enzyme of L-phenyla 97.5 3.4E-05 1.2E-09 78.0 3.5 36 6-41 56-100 (721)
259 4b1b_A TRXR, thioredoxin reduc 97.5 0.00028 9.7E-09 69.6 9.8 100 6-175 223-323 (542)
260 1n4w_A CHOD, cholesterol oxida 97.5 6.6E-05 2.3E-09 73.8 5.2 38 4-41 3-40 (504)
261 2a87_A TRXR, TR, thioredoxin r 97.5 0.00056 1.9E-08 63.2 11.2 98 6-172 155-253 (335)
262 1gpe_A Protein (glucose oxidas 97.5 6.9E-05 2.4E-09 75.0 5.1 38 4-41 22-60 (587)
263 3q9t_A Choline dehydrogenase a 97.5 5.8E-05 2E-09 75.1 4.4 36 5-40 5-41 (577)
264 3ics_A Coenzyme A-disulfide re 97.5 0.00026 9E-09 71.0 9.1 97 6-173 187-284 (588)
265 3r9u_A Thioredoxin reductase; 97.5 0.00079 2.7E-08 61.4 11.7 97 6-171 147-244 (315)
266 1coy_A Cholesterol oxidase; ox 97.5 9.7E-05 3.3E-09 72.6 5.4 37 4-40 9-45 (507)
267 2x8g_A Thioredoxin glutathione 97.4 0.00094 3.2E-08 67.1 12.4 32 7-38 287-318 (598)
268 3d1c_A Flavin-containing putat 97.4 0.00053 1.8E-08 64.2 9.8 35 7-41 167-201 (369)
269 3kd9_A Coenzyme A disulfide re 97.4 0.00077 2.6E-08 65.1 10.8 35 7-41 149-183 (449)
270 1hyu_A AHPF, alkyl hydroperoxi 97.4 0.0012 4.1E-08 65.1 11.9 98 6-171 355-453 (521)
271 4eqs_A Coenzyme A disulfide re 97.3 0.00048 1.6E-08 66.4 8.6 94 6-172 147-241 (437)
272 3qvp_A Glucose oxidase; oxidor 97.3 0.00011 3.8E-09 73.1 4.2 35 5-39 18-53 (583)
273 2jbv_A Choline oxidase; alcoho 97.3 0.00014 4.7E-09 72.2 4.6 37 5-41 12-49 (546)
274 3lzw_A Ferredoxin--NADP reduct 97.3 0.00055 1.9E-08 63.0 8.2 96 6-171 154-250 (332)
275 4dna_A Probable glutathione re 97.3 0.0011 3.8E-08 64.3 10.2 99 6-173 170-270 (463)
276 3fim_B ARYL-alcohol oxidase; A 97.3 0.00011 3.6E-09 73.0 2.9 36 6-41 2-38 (566)
277 1vg0_A RAB proteins geranylger 97.2 0.00035 1.2E-08 69.7 5.9 38 6-43 8-45 (650)
278 3gwf_A Cyclohexanone monooxyge 97.1 0.0029 9.9E-08 62.5 11.3 54 6-62 178-231 (540)
279 4g6h_A Rotenone-insensitive NA 97.1 0.0016 5.4E-08 63.8 9.3 44 122-170 285-331 (502)
280 3llv_A Exopolyphosphatase-rela 97.0 0.00067 2.3E-08 54.0 5.2 40 1-40 1-40 (141)
281 3uox_A Otemo; baeyer-villiger 96.9 0.0064 2.2E-07 60.1 12.1 36 6-41 185-220 (545)
282 2gv8_A Monooxygenase; FMO, FAD 96.9 0.0029 1E-07 61.0 9.5 35 6-40 212-247 (447)
283 4a5l_A Thioredoxin reductase; 96.9 0.0093 3.2E-07 54.2 12.4 35 6-40 152-186 (314)
284 2g1u_A Hypothetical protein TM 96.8 0.0013 4.3E-08 53.4 4.8 36 5-40 18-53 (155)
285 3k30_A Histamine dehydrogenase 96.8 0.0079 2.7E-07 61.4 11.7 98 7-171 524-624 (690)
286 1cjc_A Protein (adrenodoxin re 96.8 0.0079 2.7E-07 58.1 11.1 36 6-41 145-201 (460)
287 1id1_A Putative potassium chan 96.7 0.0019 6.4E-08 52.2 5.5 35 5-39 2-36 (153)
288 2hmt_A YUAA protein; RCK, KTN, 96.7 0.0015 5.2E-08 51.8 4.7 39 1-39 1-39 (144)
289 1lss_A TRK system potassium up 96.6 0.002 6.7E-08 51.0 4.8 34 6-39 4-37 (140)
290 3fwz_A Inner membrane protein 96.6 0.0032 1.1E-07 50.0 5.8 35 6-40 7-41 (140)
291 2dpo_A L-gulonate 3-dehydrogen 96.5 0.0023 7.9E-08 58.5 5.0 40 1-40 1-40 (319)
292 3ic5_A Putative saccharopine d 96.4 0.0031 1.1E-07 48.0 4.5 35 6-40 5-40 (118)
293 1pzg_A LDH, lactate dehydrogen 96.4 0.0035 1.2E-07 57.7 5.5 39 2-40 5-44 (331)
294 3fbs_A Oxidoreductase; structu 96.4 0.014 4.8E-07 52.4 9.4 33 6-39 141-173 (297)
295 4e12_A Diketoreductase; oxidor 96.4 0.0038 1.3E-07 56.2 5.4 38 1-40 1-38 (283)
296 3ado_A Lambda-crystallin; L-gu 96.3 0.0028 9.5E-08 57.7 4.4 40 1-40 1-40 (319)
297 3lk7_A UDP-N-acetylmuramoylala 96.3 0.0037 1.3E-07 60.3 5.3 37 4-40 7-43 (451)
298 1lqt_A FPRA; NADP+ derivative, 96.2 0.02 6.9E-07 55.2 9.8 36 6-41 147-203 (456)
299 3c85_A Putative glutathione-re 96.1 0.006 2.1E-07 50.8 5.2 35 6-40 39-74 (183)
300 3klj_A NAD(FAD)-dependent dehy 96.1 0.0049 1.7E-07 58.1 4.9 36 7-42 147-182 (385)
301 1f0y_A HCDH, L-3-hydroxyacyl-C 96.0 0.0066 2.2E-07 55.1 5.3 34 7-40 16-49 (302)
302 4b63_A L-ornithine N5 monooxyg 96.0 0.039 1.3E-06 53.9 11.1 36 6-41 246-283 (501)
303 4gcm_A TRXR, thioredoxin reduc 96.0 0.0051 1.7E-07 56.0 4.2 35 7-41 146-180 (312)
304 3d0o_A L-LDH 1, L-lactate dehy 95.9 0.0066 2.2E-07 55.5 4.8 39 1-39 1-41 (317)
305 2gag_A Heterotetrameric sarcos 95.9 0.016 5.6E-07 61.3 8.5 34 7-40 285-318 (965)
306 3tl2_A Malate dehydrogenase; c 95.9 0.0085 2.9E-07 54.6 5.4 37 3-39 5-42 (315)
307 4a9w_A Monooxygenase; baeyer-v 95.9 0.03 1E-06 51.6 9.2 33 6-39 163-195 (357)
308 3l4b_C TRKA K+ channel protien 95.8 0.0069 2.4E-07 52.1 4.4 33 8-40 2-34 (218)
309 1bg6_A N-(1-D-carboxylethyl)-L 95.8 0.008 2.7E-07 56.0 4.9 38 1-40 1-38 (359)
310 3ghy_A Ketopantoate reductase 95.8 0.0096 3.3E-07 54.9 5.2 33 6-38 3-35 (335)
311 1o94_A Tmadh, trimethylamine d 95.7 0.03 1E-06 57.4 9.4 33 7-39 529-563 (729)
312 3k96_A Glycerol-3-phosphate de 95.7 0.0097 3.3E-07 55.3 5.1 37 4-40 27-63 (356)
313 3qsg_A NAD-binding phosphogluc 95.7 0.0081 2.8E-07 54.8 4.5 39 1-39 19-58 (312)
314 2hjr_A Malate dehydrogenase; m 95.6 0.012 4E-07 54.1 5.3 35 6-40 14-49 (328)
315 3dfz_A SIRC, precorrin-2 dehyd 95.6 0.01 3.5E-07 50.9 4.5 35 4-38 29-63 (223)
316 2x5o_A UDP-N-acetylmuramoylala 95.5 0.0094 3.2E-07 57.2 4.3 38 5-42 4-41 (439)
317 1gte_A Dihydropyrimidine dehyd 95.4 0.094 3.2E-06 56.0 12.0 34 7-40 333-367 (1025)
318 3i83_A 2-dehydropantoate 2-red 95.4 0.014 4.7E-07 53.5 5.0 33 7-39 3-35 (320)
319 3ggo_A Prephenate dehydrogenas 95.4 0.018 6E-07 52.6 5.5 36 5-40 32-69 (314)
320 2raf_A Putative dinucleotide-b 95.4 0.017 5.9E-07 49.2 5.1 35 6-40 19-53 (209)
321 1ks9_A KPA reductase;, 2-dehyd 95.4 0.016 5.5E-07 52.1 5.1 33 8-40 2-34 (291)
322 4dio_A NAD(P) transhydrogenase 95.3 0.018 6.1E-07 54.0 5.3 36 5-40 189-224 (405)
323 1ldn_A L-lactate dehydrogenase 95.3 0.018 6.3E-07 52.5 5.3 40 1-40 1-42 (316)
324 2ew2_A 2-dehydropantoate 2-red 95.3 0.016 5.5E-07 52.7 4.8 33 7-39 4-36 (316)
325 1y6j_A L-lactate dehydrogenase 95.2 0.018 6.1E-07 52.6 5.0 36 5-40 6-43 (318)
326 3pqe_A L-LDH, L-lactate dehydr 95.2 0.018 6.2E-07 52.6 5.0 37 3-39 2-40 (326)
327 3gvi_A Malate dehydrogenase; N 95.2 0.02 7E-07 52.2 5.3 37 4-40 5-42 (324)
328 2y0c_A BCEC, UDP-glucose dehyd 95.2 0.017 5.9E-07 55.9 5.1 36 5-40 7-42 (478)
329 1ps9_A 2,4-dienoyl-COA reducta 95.2 0.093 3.2E-06 53.3 10.7 42 122-171 586-628 (671)
330 3qha_A Putative oxidoreductase 95.2 0.014 4.8E-07 52.8 4.1 35 6-40 15-49 (296)
331 3sx6_A Sulfide-quinone reducta 95.2 0.046 1.6E-06 52.3 7.9 43 122-169 221-267 (437)
332 3dfu_A Uncharacterized protein 95.1 0.0063 2.2E-07 52.5 1.5 36 2-37 2-37 (232)
333 3mog_A Probable 3-hydroxybutyr 95.1 0.021 7.1E-07 55.3 5.3 36 5-40 4-39 (483)
334 3hn2_A 2-dehydropantoate 2-red 95.1 0.018 6E-07 52.6 4.6 33 7-39 3-35 (312)
335 1lld_A L-lactate dehydrogenase 95.1 0.02 6.8E-07 52.3 4.9 34 6-39 7-42 (319)
336 2ewd_A Lactate dehydrogenase,; 95.1 0.022 7.7E-07 52.0 5.2 35 6-40 4-39 (317)
337 2uyy_A N-PAC protein; long-cha 95.1 0.025 8.5E-07 51.6 5.5 35 6-40 30-64 (316)
338 1kyq_A Met8P, siroheme biosynt 95.1 0.011 3.8E-07 52.4 2.9 36 5-40 12-47 (274)
339 3gg2_A Sugar dehydrogenase, UD 95.0 0.021 7E-07 54.9 5.0 34 7-40 3-36 (450)
340 4g65_A TRK system potassium up 95.0 0.0093 3.2E-07 57.5 2.5 63 5-67 2-67 (461)
341 3g79_A NDP-N-acetyl-D-galactos 95.0 0.021 7.3E-07 55.0 5.0 35 6-40 18-54 (478)
342 1t2d_A LDH-P, L-lactate dehydr 95.0 0.026 9E-07 51.6 5.4 34 7-40 5-39 (322)
343 3p7m_A Malate dehydrogenase; p 95.0 0.027 9.3E-07 51.4 5.4 37 4-40 3-40 (321)
344 1evy_A Glycerol-3-phosphate de 95.0 0.011 3.7E-07 55.3 2.8 32 8-39 17-48 (366)
345 3p2y_A Alanine dehydrogenase/p 94.9 0.022 7.4E-07 53.0 4.6 36 5-40 183-218 (381)
346 4a7p_A UDP-glucose dehydrogena 94.9 0.026 9E-07 54.0 5.3 37 5-41 7-43 (446)
347 4huj_A Uncharacterized protein 94.9 0.016 5.3E-07 49.9 3.3 35 6-40 23-58 (220)
348 3g17_A Similar to 2-dehydropan 94.8 0.022 7.6E-07 51.4 4.4 33 7-39 3-35 (294)
349 3g0o_A 3-hydroxyisobutyrate de 94.8 0.027 9.1E-07 51.1 4.9 36 5-40 6-41 (303)
350 3doj_A AT3G25530, dehydrogenas 94.8 0.027 9.4E-07 51.2 5.0 35 6-40 21-55 (310)
351 4dll_A 2-hydroxy-3-oxopropiona 94.8 0.026 9E-07 51.6 4.7 35 6-40 31-65 (320)
352 2qyt_A 2-dehydropantoate 2-red 94.7 0.02 6.7E-07 52.2 3.9 32 6-37 8-45 (317)
353 2rcy_A Pyrroline carboxylate r 94.7 0.032 1.1E-06 49.3 5.1 35 6-40 4-42 (262)
354 3dtt_A NADP oxidoreductase; st 94.6 0.033 1.1E-06 48.7 4.9 36 5-40 18-53 (245)
355 2v6b_A L-LDH, L-lactate dehydr 94.6 0.032 1.1E-06 50.6 4.8 33 8-40 2-36 (304)
356 3pef_A 6-phosphogluconate dehy 94.6 0.029 1E-06 50.4 4.6 34 7-40 2-35 (287)
357 3eag_A UDP-N-acetylmuramate:L- 94.6 0.038 1.3E-06 50.6 5.4 34 7-40 5-39 (326)
358 3k6j_A Protein F01G10.3, confi 94.5 0.039 1.3E-06 52.8 5.4 34 7-40 55-88 (460)
359 4e21_A 6-phosphogluconate dehy 94.5 0.036 1.2E-06 51.4 4.9 36 5-40 21-56 (358)
360 1x0v_A GPD-C, GPDH-C, glycerol 94.5 0.021 7.1E-07 53.1 3.3 37 4-40 6-49 (354)
361 1zej_A HBD-9, 3-hydroxyacyl-CO 94.5 0.036 1.2E-06 49.8 4.7 34 6-40 12-45 (293)
362 2izz_A Pyrroline-5-carboxylate 94.4 0.039 1.3E-06 50.5 5.1 36 5-40 21-60 (322)
363 4ezb_A Uncharacterized conserv 94.4 0.022 7.7E-07 52.0 3.4 34 7-40 25-59 (317)
364 3l9w_A Glutathione-regulated p 94.4 0.04 1.4E-06 52.2 5.2 35 6-40 4-38 (413)
365 1zcj_A Peroxisomal bifunctiona 94.3 0.04 1.4E-06 53.2 5.1 34 7-40 38-71 (463)
366 3oj0_A Glutr, glutamyl-tRNA re 94.3 0.015 5.1E-07 46.2 1.8 35 6-40 21-55 (144)
367 2zyd_A 6-phosphogluconate dehy 94.3 0.037 1.3E-06 53.6 4.8 37 4-40 13-49 (480)
368 3c24_A Putative oxidoreductase 94.3 0.048 1.6E-06 48.9 5.3 34 7-40 12-46 (286)
369 2q3e_A UDP-glucose 6-dehydroge 94.3 0.033 1.1E-06 53.8 4.5 34 7-40 6-41 (467)
370 2xve_A Flavin-containing monoo 94.3 0.041 1.4E-06 53.2 5.1 36 6-41 197-232 (464)
371 1l7d_A Nicotinamide nucleotide 94.3 0.045 1.6E-06 51.4 5.3 35 6-40 172-206 (384)
372 1x13_A NAD(P) transhydrogenase 94.3 0.038 1.3E-06 52.2 4.7 35 6-40 172-206 (401)
373 2vns_A Metalloreductase steap3 94.3 0.049 1.7E-06 46.6 5.0 35 6-40 28-62 (215)
374 1guz_A Malate dehydrogenase; o 94.2 0.045 1.5E-06 49.8 5.0 33 8-40 2-36 (310)
375 4gwg_A 6-phosphogluconate dehy 94.2 0.048 1.6E-06 52.6 5.4 36 5-40 3-38 (484)
376 3tri_A Pyrroline-5-carboxylate 94.2 0.053 1.8E-06 48.5 5.4 35 6-40 3-40 (280)
377 1mv8_A GMD, GDP-mannose 6-dehy 94.2 0.034 1.2E-06 53.2 4.3 33 8-40 2-34 (436)
378 4e4t_A Phosphoribosylaminoimid 94.2 0.057 1.9E-06 51.4 5.9 38 3-40 32-69 (419)
379 3hwr_A 2-dehydropantoate 2-red 94.2 0.043 1.5E-06 50.1 4.8 33 6-39 19-51 (318)
380 1ur5_A Malate dehydrogenase; o 94.2 0.049 1.7E-06 49.4 5.2 34 7-40 3-37 (309)
381 3vku_A L-LDH, L-lactate dehydr 94.2 0.045 1.5E-06 49.9 4.9 37 3-39 6-44 (326)
382 3pid_A UDP-glucose 6-dehydroge 94.2 0.039 1.3E-06 52.3 4.6 34 6-40 36-69 (432)
383 3l6d_A Putative oxidoreductase 94.2 0.06 2E-06 48.8 5.7 35 6-40 9-43 (306)
384 3q2o_A Phosphoribosylaminoimid 94.1 0.11 3.9E-06 48.7 7.8 36 6-41 14-49 (389)
385 1z82_A Glycerol-3-phosphate de 94.1 0.046 1.6E-06 50.3 4.9 34 6-39 14-47 (335)
386 3h28_A Sulfide-quinone reducta 94.1 0.085 2.9E-06 50.3 7.0 42 122-170 213-255 (430)
387 3gpi_A NAD-dependent epimerase 94.1 0.061 2.1E-06 48.1 5.5 35 7-41 4-38 (286)
388 1txg_A Glycerol-3-phosphate de 94.0 0.043 1.5E-06 50.4 4.5 30 8-37 2-31 (335)
389 3ego_A Probable 2-dehydropanto 94.0 0.048 1.7E-06 49.5 4.7 32 7-39 3-34 (307)
390 3pdu_A 3-hydroxyisobutyrate de 94.0 0.036 1.2E-06 49.7 3.9 33 8-40 3-35 (287)
391 1pjc_A Protein (L-alanine dehy 93.9 0.049 1.7E-06 50.7 4.7 35 6-40 167-201 (361)
392 1jw9_B Molybdopterin biosynthe 93.9 0.05 1.7E-06 47.7 4.4 35 6-40 31-66 (249)
393 2o3j_A UDP-glucose 6-dehydroge 93.9 0.049 1.7E-06 52.8 4.7 34 7-40 10-45 (481)
394 4ap3_A Steroid monooxygenase; 93.9 0.047 1.6E-06 53.9 4.7 36 6-41 191-226 (549)
395 1oju_A MDH, malate dehydrogena 93.8 0.054 1.9E-06 48.7 4.5 34 7-40 1-36 (294)
396 3nep_X Malate dehydrogenase; h 93.7 0.061 2.1E-06 48.8 4.8 34 7-40 1-36 (314)
397 2a9f_A Putative malic enzyme ( 93.7 0.067 2.3E-06 49.6 5.0 35 5-39 187-222 (398)
398 3ktd_A Prephenate dehydrogenas 93.7 0.077 2.6E-06 48.8 5.4 35 6-40 8-42 (341)
399 1vpd_A Tartronate semialdehyde 93.6 0.055 1.9E-06 48.8 4.3 34 7-40 6-39 (299)
400 1a5z_A L-lactate dehydrogenase 93.5 0.061 2.1E-06 49.1 4.5 33 8-40 2-36 (319)
401 2vhw_A Alanine dehydrogenase; 93.5 0.076 2.6E-06 49.7 5.2 36 5-40 167-202 (377)
402 2iz1_A 6-phosphogluconate dehy 93.5 0.078 2.7E-06 51.3 5.4 35 6-40 5-39 (474)
403 3cky_A 2-hydroxymethyl glutara 93.5 0.064 2.2E-06 48.4 4.5 35 6-40 4-38 (301)
404 2f1k_A Prephenate dehydrogenas 93.4 0.073 2.5E-06 47.4 4.8 33 8-40 2-34 (279)
405 2eez_A Alanine dehydrogenase; 93.4 0.076 2.6E-06 49.6 5.0 36 5-40 165-200 (369)
406 3vtf_A UDP-glucose 6-dehydroge 93.4 0.073 2.5E-06 50.6 4.9 34 7-40 22-55 (444)
407 1pjq_A CYSG, siroheme synthase 93.4 0.057 1.9E-06 52.0 4.2 35 4-38 10-44 (457)
408 3e8x_A Putative NAD-dependent 93.4 0.072 2.5E-06 46.0 4.5 37 4-40 19-56 (236)
409 2h78_A Hibadh, 3-hydroxyisobut 93.3 0.067 2.3E-06 48.4 4.3 34 7-40 4-37 (302)
410 1jay_A Coenzyme F420H2:NADP+ o 93.3 0.075 2.6E-06 45.1 4.5 33 8-40 2-35 (212)
411 1dlj_A UDP-glucose dehydrogena 93.2 0.056 1.9E-06 51.1 3.8 32 8-40 2-33 (402)
412 3ldh_A Lactate dehydrogenase; 93.2 0.087 3E-06 48.0 4.9 35 6-40 21-57 (330)
413 1vl6_A Malate oxidoreductase; 93.2 0.089 3E-06 48.7 5.0 35 4-38 190-225 (388)
414 4gbj_A 6-phosphogluconate dehy 93.2 0.06 2.1E-06 48.6 3.8 35 7-41 6-40 (297)
415 4ffl_A PYLC; amino acid, biosy 93.2 0.088 3E-06 49.0 5.1 35 8-42 3-37 (363)
416 2gf2_A Hibadh, 3-hydroxyisobut 93.1 0.082 2.8E-06 47.6 4.7 33 8-40 2-34 (296)
417 2p4q_A 6-phosphogluconate dehy 93.1 0.096 3.3E-06 50.9 5.4 35 6-40 10-44 (497)
418 1yqg_A Pyrroline-5-carboxylate 93.1 0.082 2.8E-06 46.6 4.5 33 8-40 2-35 (263)
419 2pv7_A T-protein [includes: ch 93.1 0.09 3.1E-06 47.4 4.8 33 7-39 22-55 (298)
420 3d1l_A Putative NADP oxidoredu 93.1 0.084 2.9E-06 46.7 4.5 35 6-40 10-45 (266)
421 1hdo_A Biliverdin IX beta redu 93.0 0.097 3.3E-06 43.9 4.8 34 7-40 4-38 (206)
422 1nyt_A Shikimate 5-dehydrogena 93.0 0.11 3.8E-06 46.1 5.3 35 5-39 118-152 (271)
423 2i6t_A Ubiquitin-conjugating e 93.0 0.088 3E-06 47.6 4.6 34 7-40 15-50 (303)
424 3fi9_A Malate dehydrogenase; s 93.0 0.11 3.8E-06 47.7 5.3 36 4-39 6-44 (343)
425 2pgd_A 6-phosphogluconate dehy 93.0 0.099 3.4E-06 50.7 5.3 34 7-40 3-36 (482)
426 2aef_A Calcium-gated potassium 93.0 0.036 1.2E-06 48.1 2.0 34 6-40 9-42 (234)
427 3dhn_A NAD-dependent epimerase 93.0 0.066 2.3E-06 45.9 3.7 35 7-41 5-40 (227)
428 1yj8_A Glycerol-3-phosphate de 93.0 0.074 2.5E-06 49.7 4.3 34 7-40 22-62 (375)
429 3gt0_A Pyrroline-5-carboxylate 92.9 0.12 4.2E-06 45.1 5.3 34 7-40 3-40 (247)
430 2g5c_A Prephenate dehydrogenas 92.8 0.1 3.6E-06 46.5 4.8 33 8-40 3-37 (281)
431 3orq_A N5-carboxyaminoimidazol 92.8 0.22 7.6E-06 46.5 7.3 37 5-41 11-47 (377)
432 4aj2_A L-lactate dehydrogenase 92.8 0.12 4.1E-06 47.2 5.2 35 5-39 18-54 (331)
433 1pgj_A 6PGDH, 6-PGDH, 6-phosph 92.8 0.11 3.7E-06 50.3 5.2 34 7-40 2-35 (478)
434 3phh_A Shikimate dehydrogenase 92.8 0.13 4.4E-06 45.4 5.2 35 6-40 118-152 (269)
435 2vdc_G Glutamate synthase [NAD 92.7 0.11 3.8E-06 50.0 5.2 36 6-41 264-300 (456)
436 1hyh_A L-hicdh, L-2-hydroxyiso 92.7 0.096 3.3E-06 47.5 4.5 33 8-40 3-37 (309)
437 1np3_A Ketol-acid reductoisome 92.7 0.13 4.5E-06 47.2 5.4 35 6-40 16-50 (338)
438 3vps_A TUNA, NAD-dependent epi 92.6 0.13 4.4E-06 46.6 5.2 36 5-40 6-42 (321)
439 3b1f_A Putative prephenate deh 92.6 0.11 3.7E-06 46.6 4.6 36 4-39 4-41 (290)
440 1b8p_A Protein (malate dehydro 92.6 0.08 2.7E-06 48.5 3.8 35 4-38 3-45 (329)
441 3c7a_A Octopine dehydrogenase; 92.5 0.067 2.3E-06 50.6 3.3 30 7-36 3-33 (404)
442 2zqz_A L-LDH, L-lactate dehydr 92.5 0.12 4.3E-06 47.1 5.0 36 4-39 7-44 (326)
443 2cvz_A Dehydrogenase, 3-hydrox 92.5 0.099 3.4E-06 46.8 4.2 32 8-40 3-34 (289)
444 3h8l_A NADH oxidase; membrane 92.5 0.3 1E-05 46.1 7.8 38 123-171 232-270 (409)
445 2egg_A AROE, shikimate 5-dehyd 92.4 0.14 4.7E-06 46.2 5.0 35 5-39 140-175 (297)
446 3o0h_A Glutathione reductase; 92.3 0.12 4.2E-06 50.1 5.0 100 6-174 191-291 (484)
447 3ond_A Adenosylhomocysteinase; 92.3 0.15 5.3E-06 48.8 5.4 35 5-39 264-298 (488)
448 3d4o_A Dipicolinate synthase s 92.3 0.16 5.4E-06 45.7 5.3 36 5-40 154-189 (293)
449 1ez4_A Lactate dehydrogenase; 92.3 0.14 4.8E-06 46.6 5.0 35 5-39 4-40 (318)
450 2rir_A Dipicolinate synthase, 92.2 0.16 5.5E-06 45.8 5.3 35 5-39 156-190 (300)
451 3ius_A Uncharacterized conserv 92.2 0.11 3.7E-06 46.3 4.2 34 7-40 6-39 (286)
452 1qsg_A Enoyl-[acyl-carrier-pro 92.2 0.13 4.4E-06 45.4 4.6 36 4-39 7-45 (265)
453 3ew7_A LMO0794 protein; Q8Y8U8 92.2 0.15 5.2E-06 43.2 4.9 33 8-40 2-35 (221)
454 1sez_A Protoporphyrinogen oxid 92.1 6.1 0.00021 38.0 17.0 61 110-171 243-308 (504)
455 2wtb_A MFP2, fatty acid multif 92.1 0.14 4.9E-06 52.1 5.4 34 7-40 313-346 (725)
456 3slg_A PBGP3 protein; structur 92.0 0.15 5.1E-06 47.4 5.0 40 2-41 20-61 (372)
457 2d1y_A Hypothetical protein TT 92.0 0.21 7.2E-06 43.7 5.7 40 1-40 1-41 (256)
458 2hk9_A Shikimate dehydrogenase 92.0 0.13 4.6E-06 45.7 4.4 34 6-39 129-162 (275)
459 1i36_A Conserved hypothetical 91.9 0.12 4.2E-06 45.5 4.1 30 8-37 2-31 (264)
460 3d3w_A L-xylulose reductase; u 91.9 0.21 7.1E-06 43.3 5.6 38 2-39 3-41 (244)
461 2pd4_A Enoyl-[acyl-carrier-pro 91.9 0.17 5.9E-06 44.9 5.1 40 1-40 1-43 (275)
462 2d4a_B Malate dehydrogenase; a 91.9 0.16 5.6E-06 45.9 4.9 33 8-40 1-34 (308)
463 4gx0_A TRKA domain protein; me 91.8 0.16 5.5E-06 50.3 5.2 58 7-66 349-406 (565)
464 3k5i_A Phosphoribosyl-aminoimi 91.8 0.18 6.1E-06 47.6 5.3 35 5-40 23-57 (403)
465 3h8v_A Ubiquitin-like modifier 91.8 0.15 5E-06 45.7 4.4 36 5-40 35-71 (292)
466 4b4o_A Epimerase family protei 91.8 0.19 6.6E-06 45.0 5.3 34 7-40 1-35 (298)
467 2we8_A Xanthine dehydrogenase; 91.7 0.19 6.5E-06 46.9 5.3 38 5-42 203-240 (386)
468 4id9_A Short-chain dehydrogena 91.7 0.18 6.3E-06 46.2 5.2 38 4-41 17-55 (347)
469 2r6j_A Eugenol synthase 1; phe 91.7 0.17 5.9E-06 45.8 4.9 34 7-40 12-46 (318)
470 4egb_A DTDP-glucose 4,6-dehydr 91.7 0.13 4.3E-06 47.4 4.0 39 1-39 19-60 (346)
471 3o38_A Short chain dehydrogena 91.6 0.15 5.3E-06 44.9 4.4 37 4-40 20-58 (266)
472 3h2s_A Putative NADH-flavin re 91.6 0.18 6.3E-06 42.9 4.8 33 8-40 2-35 (224)
473 3don_A Shikimate dehydrogenase 91.5 0.13 4.5E-06 45.7 3.8 35 6-40 117-152 (277)
474 1wdk_A Fatty oxidation complex 91.5 0.16 5.4E-06 51.8 4.9 34 7-40 315-348 (715)
475 1p77_A Shikimate 5-dehydrogena 91.5 0.15 5.2E-06 45.2 4.3 35 6-40 119-153 (272)
476 3gvp_A Adenosylhomocysteinase 91.5 0.14 4.9E-06 48.1 4.1 35 5-39 219-253 (435)
477 2ahr_A Putative pyrroline carb 91.5 0.15 5.1E-06 44.8 4.1 34 7-40 4-37 (259)
478 3ce6_A Adenosylhomocysteinase; 91.4 0.2 6.8E-06 48.4 5.2 36 5-40 273-308 (494)
479 4fs3_A Enoyl-[acyl-carrier-pro 91.4 0.21 7.1E-06 43.9 5.0 40 1-40 1-43 (256)
480 3rui_A Ubiquitin-like modifier 91.4 0.2 6.7E-06 45.8 4.8 35 6-40 34-69 (340)
481 1yb4_A Tartronic semialdehyde 91.3 0.12 4.1E-06 46.4 3.4 33 7-40 4-36 (295)
482 2x6t_A ADP-L-glycero-D-manno-h 91.2 0.22 7.4E-06 46.0 5.1 36 5-40 45-82 (357)
483 1zud_1 Adenylyltransferase THI 91.2 0.19 6.6E-06 44.0 4.5 35 6-40 28-63 (251)
484 2yjz_A Metalloreductase steap4 90.5 0.04 1.4E-06 46.6 0.0 35 6-40 19-53 (201)
485 3gem_A Short chain dehydrogena 91.1 0.21 7E-06 44.0 4.6 39 2-40 23-62 (260)
486 3nrc_A Enoyl-[acyl-carrier-pro 91.1 0.22 7.4E-06 44.4 4.8 39 1-39 21-62 (280)
487 3u62_A Shikimate dehydrogenase 91.1 0.24 8.1E-06 43.4 4.9 33 8-40 110-143 (253)
488 2x0j_A Malate dehydrogenase; o 91.0 0.2 6.8E-06 44.9 4.5 34 7-40 1-36 (294)
489 2dbq_A Glyoxylate reductase; D 91.0 0.3 1E-05 44.8 5.8 35 6-40 150-184 (334)
490 3k31_A Enoyl-(acyl-carrier-pro 91.0 0.27 9.1E-06 44.2 5.3 36 4-39 28-66 (296)
491 1gpj_A Glutamyl-tRNA reductase 90.9 0.23 8E-06 46.8 5.1 35 5-39 166-201 (404)
492 3ojo_A CAP5O; rossmann fold, c 90.9 0.18 6.2E-06 47.8 4.2 34 7-40 12-45 (431)
493 1cyd_A Carbonyl reductase; sho 90.9 0.29 1E-05 42.3 5.4 37 3-39 4-41 (244)
494 2h7i_A Enoyl-[acyl-carrier-pro 90.8 0.25 8.5E-06 43.6 4.9 39 1-39 1-43 (269)
495 2d5c_A AROE, shikimate 5-dehyd 90.8 0.26 8.8E-06 43.5 5.0 32 8-39 118-149 (263)
496 1leh_A Leucine dehydrogenase; 90.7 0.28 9.6E-06 45.4 5.3 33 5-37 172-204 (364)
497 2qrj_A Saccharopine dehydrogen 90.7 0.22 7.7E-06 46.3 4.6 34 6-39 214-251 (394)
498 1mld_A Malate dehydrogenase; o 90.7 0.19 6.4E-06 45.7 4.0 32 8-39 2-36 (314)
499 3two_A Mannitol dehydrogenase; 90.6 0.25 8.6E-06 45.5 5.0 35 6-40 177-211 (348)
500 3tnl_A Shikimate dehydrogenase 90.6 0.28 9.7E-06 44.4 5.1 34 6-39 154-188 (315)
No 1
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=100.00 E-value=3e-45 Score=354.84 Aligned_cols=343 Identities=22% Similarity=0.286 Sum_probs=256.8
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecc
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQ 83 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 83 (426)
++++||+||||||+||++|+.|+++|++|+||||.+.+.. .++++.+.++++++|+++|+ .+.+...+.+.....
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~---~~~~~~l~~~~~~~l~~lg~--~~~~~~~~~~~~~~~ 95 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKP---VGAAISVWPNGVKCMAHLGM--GDIMETFGGPLRRMA 95 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC-------CEEEECHHHHHHHHHTTC--HHHHHHHSCCCCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCC---cCeeEEECHHHHHHHHHCCC--HHHHHhhcCCCcceE
Confidence 4678999999999999999999999999999999987653 57889999999999999988 666665554432211
Q ss_pred ccccc-ccccccccc----ccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEE
Q 014324 84 NQATD-NAKVTRTLA----RDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIE 157 (426)
Q Consensus 84 ~~~~~-~~~~~~~~~----~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~ 157 (426)
..... ++.+..... .......+.++|..|++.|.+.+++ + |+++++|++++.+++ .|+++ +.+|++
T Consensus 96 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~-~~i~~~~~v~~i~~~~~--~v~v~---~~~g~~-- 167 (407)
T 3rp8_A 96 YRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR-DSVQFGKRVTRCEEDAD--GVTVW---FTDGSS-- 167 (407)
T ss_dssp EEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG-GGEEESCCEEEEEEETT--EEEEE---ETTSCE--
T ss_pred EEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc-CEEEECCEEEEEEecCC--cEEEE---EcCCCE--
Confidence 12222 322111111 1112445678999999999998877 6 999999999997544 57766 677874
Q ss_pred EeecEEEeccCCchhhhhhhcC-CCcccccceEEEEEEeeCCCCCchHHHhhhhcccCCCCceeeEecCCCceEEEEEec
Q 014324 158 IKGNLLVAADGCLSSIRQSFLS-DFKLRYSGYCAWRGVLDFSGIEDSEIIKGMRRVYPDLGKCLYFDLASGTHSVFYELL 236 (426)
Q Consensus 158 ~~~d~vI~AdG~~S~vR~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (426)
++||+||+|||.+|.+|+++.+ ...+.+.++..|.+.++.+... + .......+++++++++++|++
T Consensus 168 ~~a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------~-~~~~~~~~~~~~~~~~~~p~~ 234 (407)
T 3rp8_A 168 ASGDLLIAADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEAL------------A-PGDQWTTFVGEGKQVSLMPVS 234 (407)
T ss_dssp EEESEEEECCCTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTT------------C-CTTEEEEEEETTEEEEEEEET
T ss_pred EeeCEEEECCCcChHHHHHhcCCCCCCcccCcEEEEEEEeccccc------------C-CCCceEEEECCCcEEEEEEcC
Confidence 8999999999999999999843 3466778888888887654211 1 112233455788999999999
Q ss_pred CCeeeEEEEEecCCCCcCCCcceeccCHHHHHHHHHHHhhcccHHHHHHhhhcCcce--EeeeeccCCCCccccccEEEe
Q 014324 237 NKRLNWVWYINQPEPIMKGNSVTMRVSNDMIKNMHEEAEKVWLPEFVKVIKETKEPF--INAMYDCDPLKQIFWSNVVLI 314 (426)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~~~~~rv~Lv 314 (426)
++...|.+....+.... .+.+...+.+......|.+.+.++++...... .+..+...+.++|..+|++||
T Consensus 235 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~Lv 306 (407)
T 3rp8_A 235 AGRFYFFFDVPLPAGLA--------EDRDTLRADLSRYFAGWAPPVQKLIAALDPQTTNRIEIHDIEPFSRLVRGRVALL 306 (407)
T ss_dssp TTEEEEEEEEECCTTCS--------CCTTTHHHHHHHHTTTCCHHHHHHHHHSCGGGCEEEEEEECCCCSCCEETTEEEC
T ss_pred CCeEEEEEEeCCCcCCC--------CCchhHHHHHHHHhcCCChHHHHHHHcCCccceeEEeeEecCCCCceecCCEEEE
Confidence 99888877765433210 11222233334456778888888887655432 355666666788999999999
Q ss_pred ccccccCCCCCcchhhhhHHHHHHHHHHHHhhccccHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhhc
Q 014324 315 GDAAHPTTPHGLRSTNMSILDAMVLGKSLEKWGVEGLLSALEEYQTVRLPVTSKQVLHSRRLGRIKQG 382 (426)
Q Consensus 315 GDAAh~~~P~~G~G~~~ai~Da~~La~~L~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~~~~~~~~~~~ 382 (426)
|||||.++|+.|||+|+||+||..|+++|.... +.+.+|+.|+++|++++..+++.+..+.++++.
T Consensus 307 GDAAh~~~P~~GqG~~~al~da~~La~~L~~~~--~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~ 372 (407)
T 3rp8_A 307 GDAGHSTTPDIGQGGCAAMEDAVVLGAVFRQTR--DIAAALREYEAQRCDRVRDLVLKARKRCDITHG 372 (407)
T ss_dssp GGGTCCCCGGGSCHHHHHHHHHHHHHHHHHSCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EcccccCCcchhhhHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhc
Confidence 999999999999999999999999999998654 788999999999999999999999999999864
No 2
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=100.00 E-value=1.7e-44 Score=350.16 Aligned_cols=356 Identities=16% Similarity=0.156 Sum_probs=237.5
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhcc---Ccceeecc
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLA---TVPLTIDQ 83 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~ 83 (426)
++|+||||||+||++|+.|+++|++|+||||.+.+... ..|.++.+.|+++++|+++|+ .+.+... ........
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~-~~G~~i~l~~~~~~~L~~lg~--~~~~~~~~~~~~~~~~~~ 78 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSI-LPGYGIHINSFGKQALQECLP--AENWLAFEEASRYIGGQS 78 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSS-CCCCEEEECHHHHHHHHHHSC--HHHHHHHHHHCEEECCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcC-CCceEEeeCHHHHHHHHHcCC--hHHHHHhhhhhcccCcce
Confidence 68999999999999999999999999999999887542 257789999999999999987 4433221 11111111
Q ss_pred ccc-ccccccc------ccccccCCCcchhccHHHHHHHHHhcCCCCeeEeeeeEEEEEEecCCceEEEEEEeccCCceE
Q 014324 84 NQA-TDNAKVT------RTLARDDNFNFRAAHWADLHGLLYNALPPEIFLRGHQYLSFCISEVKTTVTVKAKVLQTDEVI 156 (426)
Q Consensus 84 ~~~-~~~~~~~------~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~ 156 (426)
... ..+.... .............++|..|+++|.+.++. .|++++++++++..++ ..|+++ ++||++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~-~v~~~~~v~~~~~~~~-~~v~v~---~~dG~~- 152 (412)
T 4hb9_A 79 RFYNERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLAN-TIQWNKTFVRYEHIEN-GGIKIF---FADGSH- 152 (412)
T ss_dssp EEECTTSCEEEC--------------CEEEEEHHHHHHHHHTTCTT-TEECSCCEEEEEECTT-SCEEEE---ETTSCE-
T ss_pred eEecCCcceecccCCccccccccccccceEeeHHHHHHHHHhhccc-eEEEEEEEEeeeEcCC-CeEEEE---ECCCCE-
Confidence 111 1111110 00111122334568999999999987753 3899999999986443 467777 788986
Q ss_pred EEeecEEEeccCCchhhhhhhcCCCcccccceEEEEEEeeCCCCCchHHHhhhhcccCCCCceeeEecCCCceEEEEE--
Q 014324 157 EIKGNLLVAADGCLSSIRQSFLSDFKLRYSGYCAWRGVLDFSGIEDSEIIKGMRRVYPDLGKCLYFDLASGTHSVFYE-- 234 (426)
Q Consensus 157 ~~~~d~vI~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 234 (426)
++||+||||||++|.||+++.+.....+.++..+.+.....+.... .....+........+...++...+.+.
T Consensus 153 -~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (412)
T 4hb9_A 153 -ENVDVLVGADGSNSKVRKQYLPFIERFDVGVSMIIGRARLTPALTA----LLPQNFRDGTPNSIVPKSPDWLFISMWRA 227 (412)
T ss_dssp -EEESEEEECCCTTCHHHHHHSTTCCCEEEEEEEEEEEEECCHHHHH----HSCGGGTSSCCEEECCSSSEEEEEEEEEE
T ss_pred -EEeeEEEECCCCCcchHHHhCCCccccccceeEEEEEEecchhhhc----chhhhhccCCcceEeecCCCcceeeeeec
Confidence 8999999999999999999988888778888888877766532111 111111111111111111111111111
Q ss_pred ---------ecCCeeeEEEEEecCCCCcCCCcceeccCHHHHHHHHHHHhhcccHHHHHHhhhcCcc--eEeeeeccCCC
Q 014324 235 ---------LLNKRLNWVWYINQPEPIMKGNSVTMRVSNDMIKNMHEEAEKVWLPEFVKVIKETKEP--FINAMYDCDPL 303 (426)
Q Consensus 235 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~ 303 (426)
.........|........... .....+.+.+.+.+......|.|.+.++++..... ..+......+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~li~~~~~~~~~~~~~~~~~~~ 305 (412)
T 4hb9_A 228 PVNIHVEASLAEIDNFIVWVYVAATDSLPD--NITDFSAEALCDLVQSRMISWDPSLHTLVQQSDMENISPLHLRSMPHL 305 (412)
T ss_dssp ESCTTSCGGGCCEEEEEEEEEEEEGGGSCT--TGGGCCHHHHHHHHHHHTTTSCHHHHHHHHTSCTTCCEEEEEEECCCC
T ss_pred CCceeEEEeccCCCceEEEEEecccccccc--cccccchHHHHHHHHHHhccCChHHHHHHHhcccceeccchhcccccc
Confidence 111111112221111111000 01223455556666667788999999998876543 34445556677
Q ss_pred CccccccEEEeccccccCCCCCcchhhhhHHHHHHHHHHHHhh--ccccHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014324 304 KQIFWSNVVLIGDAAHPTTPHGLRSTNMSILDAMVLGKSLEKW--GVEGLLSALEEYQTVRLPVTSKQVLHSRRLGR 378 (426)
Q Consensus 304 ~~~~~~rv~LvGDAAh~~~P~~G~G~~~ai~Da~~La~~L~~~--~~~~~~~~L~~Y~~~R~~~~~~~~~~~~~~~~ 378 (426)
++|..|||+|+|||||.|+|+.|||+|+||+||.+|+++|... ...+.+++|+.|+++|+++++.+++.+.+.+.
T Consensus 306 ~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~~~~~~aL~~Ye~~R~~~~~~~~~~s~~~~~ 382 (412)
T 4hb9_A 306 LPWKSSTVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLASVASGHEELVKAISDYEQQMRAYANEIVGISLRSAQ 382 (412)
T ss_dssp CCCCCCSEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999999886 34567899999999999999999999988765
No 3
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=100.00 E-value=1.3e-43 Score=342.10 Aligned_cols=349 Identities=22% Similarity=0.378 Sum_probs=250.2
Q ss_pred CCCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeec
Q 014324 3 KKEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTID 82 (426)
Q Consensus 3 ~~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 82 (426)
.|.++||+||||||+||++|+.|+++|++|+||||.+.+.. ..++++.+.++++++|+++|+. + .....+....
T Consensus 2 ~~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~--~~~~g~~l~~~~~~~l~~~g~~--~--~~~~~~~~~~ 75 (397)
T 2vou_A 2 SPTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLS--GFGTGIVVQPELVHYLLEQGVE--L--DSISVPSSSM 75 (397)
T ss_dssp CCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCC--CCSCEEECCHHHHHHHHHTTCC--G--GGTCBCCCEE
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCC--ccccccccChhHHHHHHHcCCc--c--ccccccccce
Confidence 35678999999999999999999999999999999987522 3567889999999999999983 2 2222222111
Q ss_pred ccccc-ccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEee
Q 014324 83 QNQAT-DNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKG 160 (426)
Q Consensus 83 ~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~ 160 (426)
..... .+..+... ..+...++|..+.+.|.+.+ .++ ++++++|++++.+++ .++++ +.+|++ ++|
T Consensus 76 ~~~~~~~g~~~~~~-----~~~~~~~~~~~l~~~L~~~~-~~~~i~~~~~v~~i~~~~~--~v~v~---~~~g~~--~~a 142 (397)
T 2vou_A 76 EYVDALTGERVGSV-----PADWRFTSYDSIYGGLYELF-GPERYHTSKCLVGLSQDSE--TVQMR---FSDGTK--AEA 142 (397)
T ss_dssp EEEETTTCCEEEEE-----ECCCCEEEHHHHHHHHHHHH-CSTTEETTCCEEEEEECSS--CEEEE---ETTSCE--EEE
T ss_pred EEEecCCCCccccc-----cCcccccCHHHHHHHHHHhC-CCcEEEcCCEEEEEEecCC--EEEEE---ECCCCE--EEC
Confidence 11111 22211111 11223467888999998876 466 999999999986543 56666 567764 899
Q ss_pred cEEEeccCCchhhhhhhcCCCcccccceEEEEEEeeCCCCCchHHHhhhhcccCCCCceeeEecCCCceEEEEEecCC--
Q 014324 161 NLLVAADGCLSSIRQSFLSDFKLRYSGYCAWRGVLDFSGIEDSEIIKGMRRVYPDLGKCLYFDLASGTHSVFYELLNK-- 238 (426)
Q Consensus 161 d~vI~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 238 (426)
|+||+|||.+|.+|+++. ...+.+.++..|++.++..... ......+ .....++.+++.++.++|++++
T Consensus 143 d~vV~AdG~~S~vr~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~g 213 (397)
T 2vou_A 143 NWVIGADGGASVVRKRLL-GIEPTYAGYVTWRGVLQPGEVA-DDVWNYF-------NDKFTYGLLDDGHLIAYPIPGREN 213 (397)
T ss_dssp SEEEECCCTTCHHHHHHH-CCCCEEEEEEEEEEEECTTSSC-HHHHHHH-------TTEEEEEEETTEEEEEEEECCSST
T ss_pred CEEEECCCcchhHHHHhc-cCCCCccceEEEEEEeeccccC-hhhhhhh-------cCceeEEecCCCEEEEEECCCCCC
Confidence 999999999999999998 6667788888888888743322 1111000 0123345567778888999864
Q ss_pred ----eeeEEEEEecCCCCc--------CCCcce-----eccCHHHHHHHHHHHhhcccHHHHHHhhhcCcceEeeeeccC
Q 014324 239 ----RLNWVWYINQPEPIM--------KGNSVT-----MRVSNDMIKNMHEEAEKVWLPEFVKVIKETKEPFINAMYDCD 301 (426)
Q Consensus 239 ----~~~~~~~~~~~~~~~--------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (426)
..+|.|+.+.+.... .+..+. ...+.+.++++.+.....|.+ +.++++.......+.+...
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~- 291 (397)
T 2vou_A 214 AESPRLNFQWYWNVAEGPDLDELMTDVRGIRLPTSVHNNSLNPHNLRQFHSKGESLFKP-FRDLVLNASSPFVTVVADA- 291 (397)
T ss_dssp TSCCEEEEEEEEECCTTHHHHHHTBCTTSCBCSSEECGGGCCHHHHHHHHHHHTTSCHH-HHHHHHHCSSCEEEEEEEB-
T ss_pred ccceeEEEEEEecCCCccchhhhccCCCCcccccccCcccCCHHHHHHHHHHHHhhChH-HHHHHhccCCcceeeeeee-
Confidence 567888876543110 000000 001345556665554556887 8887776555455555443
Q ss_pred CCCccccccEEEeccccccCCCCCcchhhhhHHHHHHHHHHHHhhccccHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhh
Q 014324 302 PLKQIFWSNVVLIGDAAHPTTPHGLRSTNMSILDAMVLGKSLEKWGVEGLLSALEEYQTVRLPVTSKQVLHSRRLGRIKQ 381 (426)
Q Consensus 302 p~~~~~~~rv~LvGDAAh~~~P~~G~G~~~ai~Da~~La~~L~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~~~~~~~~~~ 381 (426)
+.++|..+||+|||||||.|+|+.|||+|+||+||..|+++|... .+.+.+|+.|+++|++++..+++.++.++++++
T Consensus 292 ~~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~--~~~~~~L~~Ye~~R~~~~~~~~~~s~~~~~~~~ 369 (397)
T 2vou_A 292 TVDRMVHGRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTKN--HDLRGSLQSWETRQLQQGHAYLNKVKKMASRLQ 369 (397)
T ss_dssp CCSCSEETTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHHC--SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCceecCcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 567899999999999999999999999999999999999999863 467899999999999999999999999999887
Q ss_pred cC
Q 014324 382 GL 383 (426)
Q Consensus 382 ~~ 383 (426)
..
T Consensus 370 ~~ 371 (397)
T 2vou_A 370 HG 371 (397)
T ss_dssp TT
T ss_pred cc
Confidence 53
No 4
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=100.00 E-value=2.7e-43 Score=358.62 Aligned_cols=387 Identities=15% Similarity=0.135 Sum_probs=248.6
Q ss_pred CccEEEEcCChHHHHHHHHHHH-----cCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCccee
Q 014324 6 KGKAVIVGGSIAGISCAHALLR-----AGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLT 80 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~-----~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~ 80 (426)
++||+||||||+||++|+.|++ .|++|+||||++.+. ..++++.++++++++|+++|+ .+.+.+.+.+..
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~---~~gra~~l~~~tle~l~~lGl--~~~l~~~~~~~~ 82 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKV---YNGQADGLQCRTLESLKNLGL--ADKILSEANDMS 82 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCC---CSCSCCEECHHHHHHHHTTTC--HHHHHTTCBCCC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCC---CCCceeEEChHHHHHHHHCCC--HHHHHHhccccc
Confidence 5799999999999999999999 999999999998764 367889999999999999998 566655544432
Q ss_pred eccccccc--ccccc--cc---ccccCCCcchhccHHHHHHHHHhcCCC-C---e-eEeeeeEEEEEEec------CCce
Q 014324 81 IDQNQATD--NAKVT--RT---LARDDNFNFRAAHWADLHGLLYNALPP-E---I-FLRGHQYLSFCISE------VKTT 142 (426)
Q Consensus 81 ~~~~~~~~--~~~~~--~~---~~~~~~~~~~~~~r~~l~~~L~~~~~~-~---~-i~~~~~v~~~~~~~------~~~~ 142 (426)
....+... +.... .. ......++...++|..++++|.+.+.+ + + |++++++++++.++ +...
T Consensus 83 ~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~ 162 (665)
T 1pn0_A 83 TIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYP 162 (665)
T ss_dssp EEEEEEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCC
T ss_pred eEEEEeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCC
Confidence 11111111 11100 00 011123345678999999999987753 4 6 99999999999764 1246
Q ss_pred EEEEEEec---------------------------------------cCCceEEEeecEEEeccCCchhhhhhhcCCCcc
Q 014324 143 VTVKAKVL---------------------------------------QTDEVIEIKGNLLVAADGCLSSIRQSFLSDFKL 183 (426)
Q Consensus 143 v~v~~~~~---------------------------------------~~g~~~~~~~d~vI~AdG~~S~vR~~l~~~~~~ 183 (426)
|++++++. .+|+..+++||+||||||++|+||+++......
T Consensus 163 V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~lg~~~~g 242 (665)
T 1pn0_A 163 VTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLGFEMIG 242 (665)
T ss_dssp EEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHTCCCEE
T ss_pred EEEEEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhcCCCCCC
Confidence 77776542 356556799999999999999999998543322
Q ss_pred cccceEEEEEEeeCCCCCchHHHhhhhcccCCCCceeeEecCCCceEEEEEecCCeeeEEEEEecCCCCcCCCcceeccC
Q 014324 184 RYSGYCAWRGVLDFSGIEDSEIIKGMRRVYPDLGKCLYFDLASGTHSVFYELLNKRLNWVWYINQPEPIMKGNSVTMRVS 263 (426)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (426)
. .+...+++++.... ..+|.......++..+.++++++|.+++..++.+.+....... ........+
T Consensus 243 ~--~~~~~~~v~d~~~~----------~~~p~~~~~~~~~~~~~g~~~~~P~~~~~~r~~~~~~~~~~~~-~~~~~~~~t 309 (665)
T 1pn0_A 243 E--QTDYIWGVLDAVPA----------SNFPDIRSRCAIHSAESGSIMIIPRENNLVRFYVQLQARAEKG-GRVDRTKFT 309 (665)
T ss_dssp E--EEEEEEEEEEEEEE----------CCCTTTTSEEEEECSSSCEEEEEECSTTCEEEEEEECC-----------CCCC
T ss_pred C--CccEEEEEEEEEEC----------CCCCCcceEEEEEeCCCceEEEEEcCCCEEEEEEEeCCccccc-cccCcCCCC
Confidence 2 22222345443211 1123222223344456778889999888666555543321100 000011123
Q ss_pred HHHHHHHHHHHhhcccHHHHHHhhhcCcceEeeeec--cCCCCccc-cccEEEeccccccCCCCCcchhhhhHHHHHHHH
Q 014324 264 NDMIKNMHEEAEKVWLPEFVKVIKETKEPFINAMYD--CDPLKQIF-WSNVVLIGDAAHPTTPHGLRSTNMSILDAMVLG 340 (426)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~-~~rv~LvGDAAh~~~P~~G~G~~~ai~Da~~La 340 (426)
.+.+.+........+. +. ......+..+. ....++|. .+||+|+|||||.|+|+.|||||+||+||.+|+
T Consensus 310 ~e~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLa 382 (665)
T 1pn0_A 310 PEVVIANAKKIFHPYT------FD-VQQLDWFTAYHIGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLG 382 (665)
T ss_dssp HHHHHHHHHHHHTTSC------CE-EEEEEEEEEEEEEEEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCccc------Cc-eeeEEEEEeeeccceehhhcccCCCEEEEECccccCCCcccCCcchhHHHHHHHH
Confidence 3333332222111111 00 01111223322 33466788 699999999999999999999999999999999
Q ss_pred HHHHhhc-cccHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhhcCCCCCCCCCCCCCCChhhhHHHhhccCCcccCCCccc
Q 014324 341 KSLEKWG-VEGLLSALEEYQTVRLPVTSKQVLHSRRLGRIKQGLALPDREPFNTKTASPQDCQELQQKTMPFFADLPSLV 419 (426)
Q Consensus 341 ~~L~~~~-~~~~~~~L~~Y~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (426)
|+|.... +...+.+|++|+++|+++++.++..++.+.++|......... +........+.+.+.+...|++|++..+
T Consensus 383 wkLa~vl~g~a~~~lL~tYe~eR~p~a~~~i~~s~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~Y 460 (665)
T 1pn0_A 383 WKLGLVLTGRAKRDILKTYEEERQPFAQALIDFDHQFSRLFSGRPAKDVA--DEMGVSMDVFKEAFVKGNEFASGTAINY 460 (665)
T ss_dssp HHHHHHHTTCBCGGGGHHHHHHHHHHHHHHHHHHHHHHHHHHSCBCSSTT--CTTSBCHHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccc--cccchhHHHHHHHHHHhhccccccCccc
Confidence 9998762 345678899999999999999999999999999865322111 1112234455565555555677766555
No 5
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=100.00 E-value=7.2e-42 Score=330.05 Aligned_cols=359 Identities=16% Similarity=0.164 Sum_probs=243.4
Q ss_pred CCCCCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccCh-hHHHHHHHHhcCCchhhhccCcce
Q 014324 1 MEKKEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDR-PAQRIIQSWLNGRPHLLHLATVPL 79 (426)
Q Consensus 1 m~~~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~-~~~~~l~~~~~~~~~~~~~~~~~~ 79 (426)
|+.|.++||+||||||+||++|+.|+++|++|+||||.+.+... ..|.++.+.+ .+.++|+++|+ .+.+.....+.
T Consensus 21 M~~~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~-~~g~~~~~~~~~~~~~l~~~gl--~~~~~~~~~~~ 97 (398)
T 2xdo_A 21 MNLLSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREAR-IFGGTLDLHKGSGQEAMKKAGL--LQTYYDLALPM 97 (398)
T ss_dssp --CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCC-CCSCCEECCTTTHHHHHHHTTC--HHHHHHHCBCC
T ss_pred ccccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCcccc-ccCCeeeeCCccHHHHHHhcCh--HHHHHHhhccc
Confidence 55567789999999999999999999999999999999876432 2566677765 56899999987 55555444332
Q ss_pred eeccccccccccccccc-cccCCCcchhccHHHHHHHHHhcCCCCeeEeeeeEEEEEEecCCceEEEEEEeccCCceEEE
Q 014324 80 TIDQNQATDNAKVTRTL-ARDDNFNFRAAHWADLHGLLYNALPPEIFLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEI 158 (426)
Q Consensus 80 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~ 158 (426)
.. ......+..+.... ..........++|..|.+.|.+.++...|+++++|++++.++ ..|+++ +.+|++ +
T Consensus 98 ~~-~~~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~--~~v~v~---~~~g~~--~ 169 (398)
T 2xdo_A 98 GV-NIADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGK--KKWTLT---FENKPS--E 169 (398)
T ss_dssp CE-EEECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECS--SSEEEE---ETTSCC--E
T ss_pred ce-EEECCCCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECC--CEEEEE---ECCCcE--E
Confidence 22 11112232111110 001112334689999999999988763399999999998654 356666 567764 8
Q ss_pred eecEEEeccCCchhhhhhhcCCCcccccceEEEEEEeeCCCCCchHHHhhhhcccCCCCceeeEecCCCceEEEEEecCC
Q 014324 159 KGNLLVAADGCLSSIRQSFLSDFKLRYSGYCAWRGVLDFSGIEDSEIIKGMRRVYPDLGKCLYFDLASGTHSVFYELLNK 238 (426)
Q Consensus 159 ~~d~vI~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (426)
+||+||+|||.+|.+|+++.. ..+.+.+...+.+.++...... +....+ ...+ ..+.++++..++.+|.+++
T Consensus 170 ~ad~vV~AdG~~S~vR~~l~~-~~~~~~g~~~~~~~~~~~~~~~-~~~~~~----~~~g--~~~~~~~~~~~~~~p~~~~ 241 (398)
T 2xdo_A 170 TADLVILANGGMSKVRKFVTD-TEVEETGTFNIQADIHQPEINC-PGFFQL----CNGN--RLMASHQGNLLFANPNNNG 241 (398)
T ss_dssp EESEEEECSCTTCSCCTTTCC-CCCEEEEEEEEEEEESSHHHHS-HHHHHH----HTTS--EEEEEETTEEEEEEEEETT
T ss_pred ecCEEEECCCcchhHHhhccC-CCceEcceEEEEEEeCchhccC-chhHhh----cCCc--eEEEecCCCeEEEEeCCCC
Confidence 999999999999999999743 3456667777777664211111 111111 1112 2234567777788888888
Q ss_pred eeeEEEEEecCCCCcCCCcceeccCHHHHHHHHHHHhhcccHHHHHHhhhcCcceEeeeeccCCCCcccc-c--cEEEec
Q 014324 239 RLNWVWYINQPEPIMKGNSVTMRVSNDMIKNMHEEAEKVWLPEFVKVIKETKEPFINAMYDCDPLKQIFW-S--NVVLIG 315 (426)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~--rv~LvG 315 (426)
..++.+.+..+.......... ..+.+...+.+...+..|.+.+.+++........+.++...+..+|.. + |++|+|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LiG 320 (398)
T 2xdo_A 242 ALHFGISFKTPDEWKNQTQVD-FQNRNSVVDFLLKEFSDWDERYKELIHTTLSFVGLATRIFPLEKPWKSKRPLPITMIG 320 (398)
T ss_dssp EEEEEEEEECCTTC---CCSC-TTCHHHHHHHHHHHTTTSCHHHHHHHHHCSCCEEEEEEECCCCSCCCSCCSSCEEECT
T ss_pred cEEEEEEEecCcccccccccC-cCCHHHHHHHHHHHHcCCChHHHHHHhCcccceeeeeEeccCCCCcccCCCccEEEEe
Confidence 877776655432211000000 113344444444456778888888887643334455544444446765 5 999999
Q ss_pred cccccCCCCCcchhhhhHHHHHHHHHHHHhhcccc-HHHHHHHHHHhhhhhHHHHHHHHHHhhhhh
Q 014324 316 DAAHPTTPHGLRSTNMSILDAMVLGKSLEKWGVEG-LLSALEEYQTVRLPVTSKQVLHSRRLGRIK 380 (426)
Q Consensus 316 DAAh~~~P~~G~G~~~ai~Da~~La~~L~~~~~~~-~~~~L~~Y~~~R~~~~~~~~~~~~~~~~~~ 380 (426)
||||.++|+.|||+|+||+||.+|+++|.... .+ .+.+|+.|+++|++++..++..+......+
T Consensus 321 DAAh~~~P~~GqG~n~ai~Da~~La~~L~~~~-~~~~~~~L~~Y~~~r~~~~~~~~~~s~~~~~~~ 385 (398)
T 2xdo_A 321 DAAHLMPPFAGQGVNSGLVDALILSDNLADGK-FNSIEEAVKNYEQQMFIYGKEAQEESTQNEIEM 385 (398)
T ss_dssp HHHHCCCCTTSCSHHHHHHHHHHHHHHHHSCC-SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ehhccCCCccCccHHHHHHHHHHHHHHHHhcc-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998753 34 789999999999999999999888777543
No 6
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=100.00 E-value=9.5e-42 Score=330.49 Aligned_cols=342 Identities=22% Similarity=0.276 Sum_probs=233.4
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCc-EEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecc
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWD-VVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQ 83 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~-v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 83 (426)
.++||+||||||+||++|+.|+++|++ |+||||.+.+.. .++++.+.++++++|+++|+ .+.+...+.+.....
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~---~g~g~~l~~~~~~~l~~lg~--~~~l~~~~~~~~~~~ 77 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRP---LGVGINIQPAAVEALAELGL--GPALAATAIPTHELR 77 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCC---CSCEEEECHHHHHHHHHTTC--HHHHHHHSEEECEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCccc---ceeEEEEChHHHHHHHHCCC--hHHHHhhCCCcceEE
Confidence 468999999999999999999999999 999999987643 56889999999999999987 566655544332111
Q ss_pred ccccccccccccc---cccCCCcchhccHHHHHHHHHhcCCC--C-e-eEeeeeEEEEEEecCCceEEEEEEeccCCceE
Q 014324 84 NQATDNAKVTRTL---ARDDNFNFRAAHWADLHGLLYNALPP--E-I-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVI 156 (426)
Q Consensus 84 ~~~~~~~~~~~~~---~~~~~~~~~~~~r~~l~~~L~~~~~~--~-~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~ 156 (426)
.....+..+.... ......+...++|..|++.|.+.+.+ + + ++++++|++++. ++ .|++++.+..+|+..
T Consensus 78 ~~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~--~v~v~~~~~~~g~~~ 154 (410)
T 3c96_A 78 YIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RD--GRVLIGARDGHGKPQ 154 (410)
T ss_dssp EECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ET--TEEEEEEEETTSCEE
T ss_pred EEcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CC--ccEEEEecCCCCCce
Confidence 1112222111110 11122345678999999999887753 3 5 999999999986 33 466664433347655
Q ss_pred EEeecEEEeccCCchhhhhhhcCCC-cccccceEEEEEEeeCCCCCchHHHhhhhcccCCCCceeeEecC--CCceEEEE
Q 014324 157 EIKGNLLVAADGCLSSIRQSFLSDF-KLRYSGYCAWRGVLDFSGIEDSEIIKGMRRVYPDLGKCLYFDLA--SGTHSVFY 233 (426)
Q Consensus 157 ~~~~d~vI~AdG~~S~vR~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 233 (426)
+++||+||+|||.+|.+|+++.+.. .+.+.+...|+++.+.++.. + +.. .++++ ++.+++++
T Consensus 155 ~~~ad~vV~AdG~~S~vR~~l~~~~~~~~~~g~~~~~~~~~~~~~~------------~--~~~-~~~~~~~~~~~~~~~ 219 (410)
T 3c96_A 155 ALGADVLVGADGIHSAVRAHLHPDQRPLSHGGITMWRGVTEFDRFL------------D--GKT-MIVANDEHWSRLVAY 219 (410)
T ss_dssp EEEESEEEECCCTTCHHHHHHCTTCCCCEEEEEEEEEEEEEESCCT------------T--SSE-EEEEECTTCCEEEEE
T ss_pred EEecCEEEECCCccchhHHHhcCCCCCCCcCCeeEEEeeccccccc------------C--CCe-EEEecCCCCcEEEEE
Confidence 6999999999999999999986544 34577777777776543211 0 111 12223 35678888
Q ss_pred EecC-----CeeeEEEEEecCCCC----cCCCcceeccCHHHHHHHHHHHhhcccH---HHHHHhhhcCcceEeeeeccC
Q 014324 234 ELLN-----KRLNWVWYINQPEPI----MKGNSVTMRVSNDMIKNMHEEAEKVWLP---EFVKVIKETKEPFINAMYDCD 301 (426)
Q Consensus 234 ~~~~-----~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 301 (426)
|+++ +...+.|.+..+... .....+...... ++++.. +..|.+ .+.++++.......+++....
T Consensus 220 p~~~~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 295 (410)
T 3c96_A 220 PISARHAAEGKSLVNWVCMVPSAAVGQLDNEADWNRDGRL---EDVLPF-FADWDLGWFDIRDLLTRNQLILQYPMVDRD 295 (410)
T ss_dssp ECCHHHHTTTCEEEEEEEEEEHHHHCCCCSSCCTTCBCCH---HHHHHH-HTTCCBTTBCHHHHHHTCSEEEEEEEEECC
T ss_pred ecCCcccCCCCcEEEEEEEecCcccccCCCccccCCCCCH---HHHHHH-hcCCCCchhHHHHHHhcCcccceeecccCC
Confidence 8853 333333433321100 000111111122 233322 334432 345666655545555666566
Q ss_pred CCCccccccEEEeccccccCCCCCcchhhhhHHHHHHHHHHHHhhccccHHHHHHHHHHhhhhhHHHHHHHHHH
Q 014324 302 PLKQIFWSNVVLIGDAAHPTTPHGLRSTNMSILDAMVLGKSLEKWGVEGLLSALEEYQTVRLPVTSKQVLHSRR 375 (426)
Q Consensus 302 p~~~~~~~rv~LvGDAAh~~~P~~G~G~~~ai~Da~~La~~L~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~~~~ 375 (426)
++++|..+||+|||||||.|+|+.|||+|+||+||.+|+++|... .+.+.+|+.|+++|++++..++..++.
T Consensus 296 ~~~~~~~grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~--~~~~~~L~~Ye~~r~~~~~~~~~~s~~ 367 (410)
T 3c96_A 296 PLPHWGRGRITLLGDAAHLMYPMGANGASQAILDGIELAAALARN--ADVAAALREYEEARRPTANKIILANRE 367 (410)
T ss_dssp CCSCCCBTTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHHC--SSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccccCCEEEEecccCCCCCccchhHHHHHHHHHHHHHHHhcc--CCHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 788899999999999999999999999999999999999999875 367899999999999999999988873
No 7
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=100.00 E-value=8.1e-41 Score=330.50 Aligned_cols=335 Identities=18% Similarity=0.157 Sum_probs=224.2
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecc
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQ 83 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 83 (426)
..++||+||||||+||++|+.|+++|++|+||||.+.+.. .+++..++++++++|+++|+ .+.+.+. .+...
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~---~~r~~~l~~~~~~~l~~lGl--~~~~~~~-~~~~~-- 80 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTG---ESRGLGFTARTMEVFDQRGI--LPRFGEV-ETSTQ-- 80 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CC---CCCSEEECHHHHHHHHTTTC--GGGGCSC-CBCCE--
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC---CCCcceECHHHHHHHHHCCC--HHHHHhc-ccccc--
Confidence 3568999999999999999999999999999999988753 45788999999999999988 5555443 21110
Q ss_pred ccccccccccccccccCCCc-chhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEee
Q 014324 84 NQATDNAKVTRTLARDDNFN-FRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKG 160 (426)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~-~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~ 160 (426)
..+ .+..+.... .....+ ...++|..+++.|.+.+. .++ |+++++|++++.+++ .|++++.+ .+| ..+++|
T Consensus 81 ~~~-~~~~~~~~~-~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~--~v~v~~~~-~~g-~~~~~a 154 (500)
T 2qa1_A 81 GHF-GGLPIDFGV-LEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGA--GVTVEVRG-PEG-KHTLRA 154 (500)
T ss_dssp EEE-TTEEEEGGG-STTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETT--EEEEEEEE-TTE-EEEEEE
T ss_pred ccc-cceeccccc-CCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCC--eEEEEEEc-CCC-CEEEEe
Confidence 001 111111100 011122 356889999999998775 478 999999999997544 57776432 223 346899
Q ss_pred cEEEeccCCchhhhhhhcCCCcccccceEEEEEEeeCCCCCchHHHhhhhcccCCCCceeeEecCCCceEEEEEecCCee
Q 014324 161 NLLVAADGCLSSIRQSFLSDFKLRYSGYCAWRGVLDFSGIEDSEIIKGMRRVYPDLGKCLYFDLASGTHSVFYELLNKRL 240 (426)
Q Consensus 161 d~vI~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (426)
|+||+|||.+|.||+++.............+.+.+..+. .|. ...+++.++++++++|.+++..
T Consensus 155 ~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~~~~~~-------------~~~---~~~~~~~~~g~~~~~p~~~g~~ 218 (500)
T 2qa1_A 155 AYLVGCDGGRSSVRKAAGFDFPGTAATMEMYLADIKGVE-------------LQP---RMIGETLPGGMVMVGPLPGGIT 218 (500)
T ss_dssp SEEEECCCTTCHHHHHTTCCCCEECCCCEEEEEEEESCC-------------CCC---EEEEEEETTEEEEEEEETTTEE
T ss_pred CEEEECCCcchHHHHHcCCCcCCCccceEEEEEEEEeCC-------------CCC---ceEEEECCCcEEEEEEcCCCEE
Confidence 999999999999999985444322222333444333321 111 1234566788899999988876
Q ss_pred eEEEEEecCCCCcCCCcceeccCHHHHHHHHHHHhhcccHHHHHHhhhcCcceEe-eeec--cCCCCccccccEEEeccc
Q 014324 241 NWVWYINQPEPIMKGNSVTMRVSNDMIKNMHEEAEKVWLPEFVKVIKETKEPFIN-AMYD--CDPLKQIFWSNVVLIGDA 317 (426)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~p~~~~~~~rv~LvGDA 317 (426)
++.+........ ......+.+.+.+.+...... . +.. ....| ..+. ....++|..+||+|+|||
T Consensus 219 ~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~---~----~~~--~~~~~~~~~~~~~~~a~~~~~grv~L~GDA 285 (500)
T 2qa1_A 219 RIIVCERGTPPQ----RRETPPSWHEVADAWKRLTGD---D----IAH--AEPVWVSAFGNATRQVTEYRRGRVILAGDS 285 (500)
T ss_dssp EEEEEETTCCC---------CCCHHHHHHHHHHHHSC---C----CTT--SEEEEEEEEECCEEECSCSEETTEEECGGG
T ss_pred EEEEEcCCCCCc----cccCCCCHHHHHHHHHHhcCC---C----CCc--cceeEEEEeccCcEEccccccCCEEEEEcc
Confidence 666543221110 001112333333333222110 0 000 01111 1111 234567888999999999
Q ss_pred cccCCCCCcchhhhhHHHHHHHHHHHHhhc-cccHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhh
Q 014324 318 AHPTTPHGLRSTNMSILDAMVLGKSLEKWG-VEGLLSALEEYQTVRLPVTSKQVLHSRRLGRIKQ 381 (426)
Q Consensus 318 Ah~~~P~~G~G~~~ai~Da~~La~~L~~~~-~~~~~~~L~~Y~~~R~~~~~~~~~~~~~~~~~~~ 381 (426)
||.|+|+.|||+|+||+||.+|+|+|.... +...+.+|++|+++|+++++.++..++.+..++.
T Consensus 286 AH~~~P~~GqG~n~gi~DA~~La~~La~~~~g~~~~~~L~~Y~~eR~~~~~~~~~~s~~~~~l~~ 350 (500)
T 2qa1_A 286 AHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNGTATEELLDSYHSERHAVGKRLLMNTQAQGLLFL 350 (500)
T ss_dssp TEECCCCSSCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCccccchhhhHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999998762 3456899999999999999999999998888876
No 8
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=100.00 E-value=6.8e-41 Score=330.95 Aligned_cols=335 Identities=16% Similarity=0.129 Sum_probs=224.8
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecc
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQ 83 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 83 (426)
..++||+||||||+||++|+.|+++|++|+||||.+.+.. .+++..++++++++|+++|+ .+.+.+. .+...
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~---~~r~~~l~~~~~~~l~~lGl--~~~~~~~-~~~~~-- 81 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTG---ESRGLGFTARTMEVFDQRGI--LPAFGPV-ETSTQ-- 81 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCC---CCCSEEECHHHHHHHHHTTC--GGGGCSC-CEESE--
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCC---CCceeEECHHHHHHHHHCCC--HHHHHhc-ccccc--
Confidence 3568999999999999999999999999999999988753 46788999999999999998 5555443 22111
Q ss_pred ccccccccccccccccCCCc-chhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEee
Q 014324 84 NQATDNAKVTRTLARDDNFN-FRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKG 160 (426)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~-~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~ 160 (426)
..+ .+..+.... .....+ ...++|..+++.|.+.+. .++ |++++++++++.+++ .|++++.+ .+| ..+++|
T Consensus 82 ~~~-~~~~~~~~~-~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~--~v~v~~~~-~~g-~~~~~a 155 (499)
T 2qa2_A 82 GHF-GGRPVDFGV-LEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGD--HVVVEVEG-PDG-PRSLTT 155 (499)
T ss_dssp EEE-TTEEEEGGG-STTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSS--CEEEEEEC-SSC-EEEEEE
T ss_pred cee-cceeccccc-CCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCC--EEEEEEEc-CCC-cEEEEe
Confidence 011 111111100 111222 367899999999998775 378 999999999986544 56666432 223 346899
Q ss_pred cEEEeccCCchhhhhhhcCCCcccccceEEEEEEeeCCCCCchHHHhhhhcccCCCCceeeEecCCCceEEEEEecCCee
Q 014324 161 NLLVAADGCLSSIRQSFLSDFKLRYSGYCAWRGVLDFSGIEDSEIIKGMRRVYPDLGKCLYFDLASGTHSVFYELLNKRL 240 (426)
Q Consensus 161 d~vI~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (426)
|+||+|||++|.||+++.............+.+.+..+. .+. ...+++.++++++++|.+++..
T Consensus 156 ~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~v~~~~-------------~~~---~~~~~~~~~g~~~~~P~~~g~~ 219 (499)
T 2qa2_A 156 RYVVGCDGGRSTVRKAAGFDFPGTSASREMFLADIRGCE-------------ITP---RPIGETVPLGMVMSAPLGDGVD 219 (499)
T ss_dssp EEEEECCCTTCHHHHHTTCCCCEECCCCCEEEEEEESCC-------------CCC---EEEEEEETTEEEEEEECSSSCE
T ss_pred CEEEEccCcccHHHHHcCCCCCCCCCccEEEEEEEEECC-------------CCc---ceEEEECCCeEEEEEEcCCCEE
Confidence 999999999999999985444322222233333333321 111 1234566788889999988876
Q ss_pred eEEEEEecCCCCcCCCcceeccCHHHHHHHHHHHhhcccHHHHHHhhhcCcceEe-eeec--cCCCCccccccEEEeccc
Q 014324 241 NWVWYINQPEPIMKGNSVTMRVSNDMIKNMHEEAEKVWLPEFVKVIKETKEPFIN-AMYD--CDPLKQIFWSNVVLIGDA 317 (426)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~p~~~~~~~rv~LvGDA 317 (426)
++.+........ ......+.+.+.+.+...... . +.. ....| ..+. ..+.++|..|||+|+|||
T Consensus 220 ~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~---~----~~~--~~~~~~~~~~~~~~~a~~~~~grv~L~GDA 286 (499)
T 2qa2_A 220 RIIVCERGAPAR----RRTGPPPYQEVAAAWQRLTGQ---D----ISH--GEPVWVSAFGDPARQVSAYRRGRVLLAGDS 286 (499)
T ss_dssp EEEEEETTCCCC----CCSSSCCHHHHHHHHHHHHSC---C----CTT--CEEEEEEEECCCEEECSCSEETTEEECGGG
T ss_pred EEEEEecCCCCc----cccCCCCHHHHHHHHHHHhCC---C----CCc--cceeEEEEEeCCcEEcccccCCCEEEEecc
Confidence 666544221110 001112333333333322110 0 000 01111 1111 234567888999999999
Q ss_pred cccCCCCCcchhhhhHHHHHHHHHHHHhhc-cccHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhh
Q 014324 318 AHPTTPHGLRSTNMSILDAMVLGKSLEKWG-VEGLLSALEEYQTVRLPVTSKQVLHSRRLGRIKQ 381 (426)
Q Consensus 318 Ah~~~P~~G~G~~~ai~Da~~La~~L~~~~-~~~~~~~L~~Y~~~R~~~~~~~~~~~~~~~~~~~ 381 (426)
||.|+|+.|||+|+||+||.+|+|+|.... +...+.+|++|+++|+++++.++..++.+..++.
T Consensus 287 AH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~~~~~~L~~Ye~eR~~~~~~~~~~s~~~~~l~~ 351 (499)
T 2qa2_A 287 AHVHLPAGGQGMNVSVQDSVNLGWKLAAVVSGRAPAGLLDTYHEERHPVGRRLLMNTQAQGMLFL 351 (499)
T ss_dssp TEEECCCSSCHHHHHHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCccccchhhhHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999998763 3456789999999999999999999998888876
No 9
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.8e-41 Score=326.26 Aligned_cols=344 Identities=19% Similarity=0.165 Sum_probs=232.5
Q ss_pred CCCCCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCccee
Q 014324 1 MEKKEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLT 80 (426)
Q Consensus 1 m~~~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~ 80 (426)
||.+.++||+||||||+|+++|+.|+++|++|+||||.+.+. ..++++.+.+++.++++++|+ .+.+.....+..
T Consensus 1 ~M~~~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~---~~~~~~~l~~~~~~~l~~~g~--~~~~~~~~~~~~ 75 (399)
T 2x3n_A 1 GMTDNHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRER---AINGADLLKPAGIRVVEAAGL--LAEVTRRGGRVR 75 (399)
T ss_dssp ----CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC------CCCCEECHHHHHHHHHTTC--HHHHHHTTCEEE
T ss_pred CCCCCcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCC---ccCceeeECchHHHHHHHcCc--HHHHHHhCCCcc
Confidence 566667899999999999999999999999999999997763 256788999999999999987 555554443322
Q ss_pred ecccccccccccccccccc--CCCcchhccHHHHHHHHHhcCCC--Ce-eEeeeeEEEEEEecCCceE--EEEEEeccCC
Q 014324 81 IDQNQATDNAKVTRTLARD--DNFNFRAAHWADLHGLLYNALPP--EI-FLRGHQYLSFCISEVKTTV--TVKAKVLQTD 153 (426)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~r~~l~~~L~~~~~~--~~-i~~~~~v~~~~~~~~~~~v--~v~~~~~~~g 153 (426)
.......++.......... .....+.++|..|.+.|.+.+++ ++ ++++++|++++.+++ .| +++ +.+|
T Consensus 76 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~--~v~g~v~---~~~g 150 (399)
T 2x3n_A 76 HELEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDER--HAIDQVR---LNDG 150 (399)
T ss_dssp CEEEEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTT--SCEEEEE---ETTS
T ss_pred eeEEEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCC--ceEEEEE---ECCC
Confidence 1111111222111111000 11123568999999999998765 78 999999999986544 45 555 5677
Q ss_pred ceEEEeecEEEeccCCchhhhhhhcCCCccc--ccce--EEEEEEeeCCCCCchHHHhhhhcccCCCCceeeEecCC-Cc
Q 014324 154 EVIEIKGNLLVAADGCLSSIRQSFLSDFKLR--YSGY--CAWRGVLDFSGIEDSEIIKGMRRVYPDLGKCLYFDLAS-GT 228 (426)
Q Consensus 154 ~~~~~~~d~vI~AdG~~S~vR~~l~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 228 (426)
++ +++|+||+|||.+|.+|+.+..+.... +.+. ..|.+.++.+ .|.. . .++.+ ++
T Consensus 151 ~~--~~ad~vV~AdG~~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~~~--------------~~~~---~-~~~~~~~~ 210 (399)
T 2x3n_A 151 RV--LRPRVVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFALAPCV--------------AERN---R-LYVDSQGG 210 (399)
T ss_dssp CE--EEEEEEEECCCTTCHHHHHTSCCCCCCCCCSSCEEEEEEECCHHH--------------HHCE---E-EEECTTSC
T ss_pred CE--EECCEEEECCCCChHHHHHhCCCccccCCCCCCceEEEEEEecCC--------------CCCc---c-EEEcCCCc
Confidence 64 899999999999999999986554444 5555 5565544321 0111 2 44567 88
Q ss_pred eEEEEEecCCeeeEEEEEecCCCCcCCCcceeccCHHHHHHHHHHHhhcccHHHH-HHhhhcC--cceEeeeeccCCCCc
Q 014324 229 HSVFYELLNKRLNWVWYINQPEPIMKGNSVTMRVSNDMIKNMHEEAEKVWLPEFV-KVIKETK--EPFINAMYDCDPLKQ 305 (426)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~p~~~ 305 (426)
+++++|+++....|.+.++.... ..+....+.+.+.+. ...|.+.+. ..++... ....+.+....+.++
T Consensus 211 ~~~~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (399)
T 2x3n_A 211 LAYFYPIGFDRARLVVSFPREEA----RELMADTRGESLRRR----LQRFVGDESAEAIAAVTGTSRFKGIPIGYLNLDR 282 (399)
T ss_dssp EEEEEEETTTEEEEEEECCHHHH----HHHHHSTTSHHHHHH----HHTTCCGGGHHHHHTCCCSTTCEECCCCCEECSC
T ss_pred EEEEEEcCCCEEEEEEEeCcccc----ccccccCCHHHHHHH----HhhcCCcchhhHHhcCCccceEEechhhcccccc
Confidence 89999998865555443321110 000000122222222 224655552 2233333 234444443345677
Q ss_pred cccccEEEeccccccCCCCCcchhhhhHHHHHHHHHHHHhhc--cccHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhhc
Q 014324 306 IFWSNVVLIGDAAHPTTPHGLRSTNMSILDAMVLGKSLEKWG--VEGLLSALEEYQTVRLPVTSKQVLHSRRLGRIKQG 382 (426)
Q Consensus 306 ~~~~rv~LvGDAAh~~~P~~G~G~~~ai~Da~~La~~L~~~~--~~~~~~~L~~Y~~~R~~~~~~~~~~~~~~~~~~~~ 382 (426)
|..+|++|+|||||.++|+.|||+|+||+||..|+++|.... +.+.+.+|+.|+++|++++..++..++.+.+++..
T Consensus 283 ~~~~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~ 361 (399)
T 2x3n_A 283 YWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACALEDALAGYQAERFPVNQAIVSYGHALATSLED 361 (399)
T ss_dssp SEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cccCcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHhccHHHHHHHHHHHhhhhhcc
Confidence 888999999999999999999999999999999999998763 24678999999999999999999999999888753
No 10
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=100.00 E-value=1.3e-40 Score=333.12 Aligned_cols=348 Identities=18% Similarity=0.093 Sum_probs=218.0
Q ss_pred CCCCCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCccee
Q 014324 1 MEKKEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLT 80 (426)
Q Consensus 1 m~~~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~ 80 (426)
|+.+.++||+||||||+||++|+.|+++|++|+||||.+.+.. .+++..++++++++++++|+ .+.+.+.+.+..
T Consensus 21 M~~~~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~---~~~~~~l~~~~~~~l~~lGl--~~~~~~~~~~~~ 95 (549)
T 2r0c_A 21 MNAPIETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTIT---HPRVGTIGPRSMELFRRWGV--AKQIRTAGWPGD 95 (549)
T ss_dssp -CCCEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCS---SCCCCEECHHHHHHHHHTTC--HHHHHTSSCCTT
T ss_pred cCCCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC---CCceeeeCHHHHHHHHHcCC--hHHHHhhcCCcc
Confidence 4445568999999999999999999999999999999987643 55778899999999999998 666665554431
Q ss_pred e----ccccccccccccccccc---------cCCCcchhccHHHHHHHHHhcCCCCeeEeeeeEEEEEEecCCceEEEEE
Q 014324 81 I----DQNQATDNAKVTRTLAR---------DDNFNFRAAHWADLHGLLYNALPPEIFLRGHQYLSFCISEVKTTVTVKA 147 (426)
Q Consensus 81 ~----~~~~~~~~~~~~~~~~~---------~~~~~~~~~~r~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~~~v~v~~ 147 (426)
. .+.....+..+...... ........++|..+++.|.+.+.+. |++++++++++.+++ .|++++
T Consensus 96 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-v~~~~~v~~~~~~~~--~v~v~~ 172 (549)
T 2r0c_A 96 HPLDAAWVTRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER-LRTRSRLDSFEQRDD--HVRATI 172 (549)
T ss_dssp SBCCEEEESSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG-EECSEEEEEEEECSS--CEEEEE
T ss_pred cccceEEeccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh-cccCcEEEEEEEeCC--EEEEEE
Confidence 1 11111122211111000 1123446788999999999877655 899999999986443 577765
Q ss_pred EeccCCceEEEeecEEEeccCCchhhhhhhcCCCcccccceEEEEEEeeCCCCCchHHHhhhhcccCCCCceeeEecCCC
Q 014324 148 KVLQTDEVIEIKGNLLVAADGCLSSIRQSFLSDFKLRYSGYCAWRGVLDFSGIEDSEIIKGMRRVYPDLGKCLYFDLASG 227 (426)
Q Consensus 148 ~~~~~g~~~~~~~d~vI~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (426)
.+..+|+..+++||+||+|||.+|.||+++.............+...+..+. .... +. ..+ ...++++.++
T Consensus 173 ~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~--~~~~---~~-~~~---~~~~~~~~p~ 243 (549)
T 2r0c_A 173 TDLRTGATRAVHARYLVACDGASSPTRKALGIDAPPRHRTQVFRNILFRAPE--LRSL---LG-ERA---ALFFFLMLSS 243 (549)
T ss_dssp EETTTCCEEEEEEEEEEECCCTTCHHHHHHTCCCCBSSCCEEEEEEEEECTT--HHHH---HG-GGC---CSEEEEEEET
T ss_pred EECCCCCEEEEEeCEEEECCCCCcHHHHHcCCCCCCCcccceEEEEEEECCc--hHHh---cC-CCC---ceEEEEECCC
Confidence 5444576567999999999999999999985433222111122223333321 1110 00 001 1223344555
Q ss_pred -ceEEEEEecCCeeeEEEEEecCCCCcCCCcceeccCHHHHHHHHHHHhhcccHHHHHHhhhcCcceEeeeeccCCCCcc
Q 014324 228 -THSVFYELLNKRLNWVWYINQPEPIMKGNSVTMRVSNDMIKNMHEEAEKVWLPEFVKVIKETKEPFINAMYDCDPLKQI 306 (426)
Q Consensus 228 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 306 (426)
...+++|++++. .|.+++..+.. . .+.+.+.+.+...... .+. ++ ......|.+ ...+.++|
T Consensus 244 ~~~~~~~p~~~~~-~~~~~~~~~~~-----~----~~~~~~~~~l~~~~~~---~~~--~~-~~~~~~~~~-~~~~a~~~ 306 (549)
T 2r0c_A 244 SLRFPLRALDGRG-LYRLTVGVDDA-----S----KSTMDSFELVRRAVAF---DTE--IE-VLSDSEWHL-THRVADSF 306 (549)
T ss_dssp TEEEEEEESSSSS-EEEEEEECSTT-----C----CSCCCHHHHHHHHBCS---CCC--CE-EEEEEEEEE-CCEECSCS
T ss_pred CcEEEEEEECCCc-EEEEEecCCCC-----C----CCHHHHHHHHHHHhCC---CCc--ee-EEEEecchh-HhhhHHhh
Confidence 677888886543 35555532110 0 1122222322222111 000 00 000111222 13456778
Q ss_pred ccccEEEeccccccCCCCCcchhhhhHHHHHHHHHHHHhhc-cccHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhhc
Q 014324 307 FWSNVVLIGDAAHPTTPHGLRSTNMSILDAMVLGKSLEKWG-VEGLLSALEEYQTVRLPVTSKQVLHSRRLGRIKQG 382 (426)
Q Consensus 307 ~~~rv~LvGDAAh~~~P~~G~G~~~ai~Da~~La~~L~~~~-~~~~~~~L~~Y~~~R~~~~~~~~~~~~~~~~~~~~ 382 (426)
..|||+|+|||||.++|+.|||+|+||+||.+|+|+|.... +...+.+|++|+++|+++++.+++.+..+..++..
T Consensus 307 ~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~a~~~lL~~Y~~eR~~~a~~~~~~s~~~~~~~~~ 383 (549)
T 2r0c_A 307 SAGRVFLTGDAAHTLSPSGGFGMNTGIGSAADLGWKLAATLRGWAGPGLLATYEEERRPVAITSLEEANVNLRRTMD 383 (549)
T ss_dssp EETTEEECGGGTEECCCGGGHHHHHHHHHHHHHHHHHHHHHHTCSCTTTTHHHHHHHHHHHHHHHHC----------
T ss_pred cCCcEEEEccccccCCCccCCccccccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 88999999999999999999999999999999999998763 23456789999999999999999999988887764
No 11
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=100.00 E-value=1.1e-39 Score=326.45 Aligned_cols=348 Identities=16% Similarity=0.058 Sum_probs=224.9
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeec-
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTID- 82 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~- 82 (426)
+.++||+||||||+||++|+.|+++|++|+||||.+.+.. .+++..++++++++|+++|+ .+.+.+.+.+....
T Consensus 3 ~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~---~~~~~~l~~~~~~~l~~lGl--~~~~~~~~~~~~~~~ 77 (535)
T 3ihg_A 3 DHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSP---YPRAAGQNPRTMELLRIGGV--ADEVVRADDIRGTQG 77 (535)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCC---CCCSCCBCHHHHHHHHHTTC--HHHHHHSCCSSCTTS
T ss_pred CccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC---CCccceECHHHHHHHHHcCC--HHHHHhhCCCccccc
Confidence 3569999999999999999999999999999999988653 45778899999999999998 66666655543221
Q ss_pred -----ccccccccccc----ccc------cccCCCcchhccHHHHHHHHHhcCCC-Ce-eEeeeeEEEEEEecCCc--eE
Q 014324 83 -----QNQATDNAKVT----RTL------ARDDNFNFRAAHWADLHGLLYNALPP-EI-FLRGHQYLSFCISEVKT--TV 143 (426)
Q Consensus 83 -----~~~~~~~~~~~----~~~------~~~~~~~~~~~~r~~l~~~L~~~~~~-~~-i~~~~~v~~~~~~~~~~--~v 143 (426)
......+..+. ... ..........++|..|++.|.+.+.+ |+ ++++++|++++.++++. .|
T Consensus 78 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v 157 (535)
T 3ihg_A 78 DFVIRLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGV 157 (535)
T ss_dssp CCEEEEESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEE
T ss_pred ceeeeEEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccE
Confidence 11112222221 000 11123345678999999999987754 78 99999999999754411 56
Q ss_pred EEEEEeccCCceEEEeecEEEeccCCchhhhhhhcCCCcc-cccc-eEEEEEEeeCCCCCchHHHhhhhcccCCCCceee
Q 014324 144 TVKAKVLQTDEVIEIKGNLLVAADGCLSSIRQSFLSDFKL-RYSG-YCAWRGVLDFSGIEDSEIIKGMRRVYPDLGKCLY 221 (426)
Q Consensus 144 ~v~~~~~~~g~~~~~~~d~vI~AdG~~S~vR~~l~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (426)
++++.+ .++ ..+++||+||+|||.+|.+|+++...... .+.. ...+. +..+ . ....+......+
T Consensus 158 ~v~~~~-~~~-~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~--~~~~---~-------~~~~~~~~~~~~ 223 (535)
T 3ihg_A 158 TARLAG-PDG-EYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVI--FDAD---L-------SGIMEPGTTGWY 223 (535)
T ss_dssp EEEEEE-TTE-EEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEE--EECC---G-------GGTSCTTCCEEE
T ss_pred EEEEEc-CCC-eEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEE--Eecc---C-------hhhccCCceEEE
Confidence 666432 222 35699999999999999999998432211 1111 11111 1111 0 000111122334
Q ss_pred EecCCCceEEEEEecC-CeeeEEEEEecCCCCcCCCcceeccCHHHHHHHHHHHhhcccHHHHHHhhhcCcceEeeeecc
Q 014324 222 FDLASGTHSVFYELLN-KRLNWVWYINQPEPIMKGNSVTMRVSNDMIKNMHEEAEKVWLPEFVKVIKETKEPFINAMYDC 300 (426)
Q Consensus 222 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (426)
+...++...+++|+++ +...+.+.+..+... . ....+.+.+.+.+..........+ + ......|.. ..
T Consensus 224 ~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~----~-~~~~~~e~~~~~l~~~~~~~~~~~----~-~~~~~~~~~-~~ 292 (535)
T 3ihg_A 224 YLHHPEFKGTFGPTDRPDRHTLFVEYDPDEGE----R-PEDFTPQRCVELIGLALDAPEVKP----E-LVDIQGWEM-AA 292 (535)
T ss_dssp EEECSSCEEEEEECSSTTEEEEEEEECTTTTC----C-GGGCCHHHHHHHHHHHHTCSSCCC----E-EEEEEEEEE-EE
T ss_pred EEECCCceEEEEEecCCCEEEEEEeeCccccC----c-cccCCHHHHHHHHHHHhCCCCCce----e-EEEeeEeee-eE
Confidence 4456777888888876 444444443322111 0 111233333333322211100000 0 000112222 13
Q ss_pred CCCCccccccEEEeccccccCCCCCcchhhhhHHHHHHHHHHHHhhc-cccHHHHHHHHHHhhhhhHHHHHHHHHHhhhh
Q 014324 301 DPLKQIFWSNVVLIGDAAHPTTPHGLRSTNMSILDAMVLGKSLEKWG-VEGLLSALEEYQTVRLPVTSKQVLHSRRLGRI 379 (426)
Q Consensus 301 ~p~~~~~~~rv~LvGDAAh~~~P~~G~G~~~ai~Da~~La~~L~~~~-~~~~~~~L~~Y~~~R~~~~~~~~~~~~~~~~~ 379 (426)
...++|..+||+|+|||||.++|+.|||+|+||+||.+|+|+|.... +...+.+|++|+++|+++++.+++.+.++.+.
T Consensus 293 ~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g~~~~~lL~~Ye~eR~p~a~~~~~~s~~~~~~ 372 (535)
T 3ihg_A 293 RIAERWREGRVFLAGDAAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQGQAGAGLLDTYEDERKVAAELVVAEALAIYAQ 372 (535)
T ss_dssp EEESCSEETTEEECTTTTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECccccCCEEEEecccccCCCccCCccccccccHHHHHHHHHHHhcCCCcHHHHHhhHHHHHHHHHHHHHHHHHhhHh
Confidence 34567888999999999999999999999999999999999998862 34567889999999999999999999988766
Q ss_pred hh
Q 014324 380 KQ 381 (426)
Q Consensus 380 ~~ 381 (426)
+.
T Consensus 373 ~~ 374 (535)
T 3ihg_A 373 RM 374 (535)
T ss_dssp HT
T ss_pred hc
Confidence 53
No 12
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=100.00 E-value=3e-40 Score=335.88 Aligned_cols=384 Identities=15% Similarity=0.173 Sum_probs=231.8
Q ss_pred CCccEEEEcCChHHHHHHHHHHH-cCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecc
Q 014324 5 EKGKAVIVGGSIAGISCAHALLR-AGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQ 83 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~-~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 83 (426)
.++||+||||||+||++|+.|++ +|++|+||||.+.+.. .++++.++++++++|+++|+ .+.+.+.+.+.....
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~---~g~a~~l~~~t~e~l~~lGl--~~~~~~~~~~~~~~~ 105 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPME---LGQADGIACRTMEMFEAFEF--ADSILKEACWINDVT 105 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCS---SCSCCEECHHHHHHHHHTTC--HHHHHHHSEEECEEE
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCC---CCceeeeCHHHHHHHHHcCc--HHHHHHhcccccceE
Confidence 35799999999999999999999 9999999999987653 56788999999999999988 555554443322111
Q ss_pred cccc----cccccc--cc---ccccCCCcchhccHHHHHHHHHhcCCC---Ce-eEeeeeEEEEEEecC--CceEEEEEE
Q 014324 84 NQAT----DNAKVT--RT---LARDDNFNFRAAHWADLHGLLYNALPP---EI-FLRGHQYLSFCISEV--KTTVTVKAK 148 (426)
Q Consensus 84 ~~~~----~~~~~~--~~---~~~~~~~~~~~~~r~~l~~~L~~~~~~---~~-i~~~~~v~~~~~~~~--~~~v~v~~~ 148 (426)
.+.. .+.... .. .......+...++|..+++.|.+.+.+ ++ |+++++|++++.+++ ...|+++++
T Consensus 106 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~ 185 (639)
T 2dkh_A 106 FWKPDPGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLE 185 (639)
T ss_dssp EEEECTTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEE
T ss_pred EECCCCCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEE
Confidence 1111 121100 00 001122344578999999999987653 34 899999999997653 235777754
Q ss_pred ec---cCCceEEEeecEEEeccCCchhhhhhhcCCCcccccceEEEEEEeeCCCCCchHHHhhhhcccCCCCceeeEecC
Q 014324 149 VL---QTDEVIEIKGNLLVAADGCLSSIRQSFLSDFKLRYSGYCAWRGVLDFSGIEDSEIIKGMRRVYPDLGKCLYFDLA 225 (426)
Q Consensus 149 ~~---~~g~~~~~~~d~vI~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (426)
+. .+|+..+++||+||+|||++|.||+++.......... ..| ++++.... ..+|.......+..
T Consensus 186 ~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~-~~~-~~~~~~~~----------~~~p~~~~~~~~~~- 252 (639)
T 2dkh_A 186 RCDAAHAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSAN-QAW-GVMDVLAV----------TDFPDVRYKVAIQS- 252 (639)
T ss_dssp ECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTTCCCEECSCS-CCE-EEEEEEEE----------ECCTTTTSEEEEEE-
T ss_pred eccccCCCCeEEEEeCEEEECCCcchHHHHHhCCCCCCCCcc-ceE-EEEEEEEc----------cCCCccceeEEEEc-
Confidence 31 3576667999999999999999999985443222111 112 33322110 01222111222233
Q ss_pred CCceEEEEEecCC-eeeEEEEEecCCCCcCCCcceeccCHHHHHHHHHHHhhcccHHHHHHhhhcCcceEeeeec--cCC
Q 014324 226 SGTHSVFYELLNK-RLNWVWYINQPEPIMKGNSVTMRVSNDMIKNMHEEAEKVWLPEFVKVIKETKEPFINAMYD--CDP 302 (426)
Q Consensus 226 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p 302 (426)
++++++++|.+++ ..++.+.+...... ........+.+.+.+........+. +. ......+..+. ...
T Consensus 253 ~~g~~~~~P~~~~~~~r~~~~~~~~~~~--~~~~~~~~~~e~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~ 323 (639)
T 2dkh_A 253 EQGNVLIIPREGGHLVRFYVEMDKLDAD--ERVASRNITVEQLIATAQRVLHPYK------LE-VKNVPWWSVYEIGQRI 323 (639)
T ss_dssp TTEEEEEEECTTSSCEEEEEECC-------------CCCHHHHHHHHHHHHTTSC------EE-EEEEEEEEEECCCCEE
T ss_pred CCceEEEEEcCCCcEEEEEEECCCcCcc--cccccCCCCHHHHHHHHHHHhCccc------Cc-ceeeeEEEecccccch
Confidence 6778889998877 55555443321010 0000111233333222221111110 00 01111222222 223
Q ss_pred CCccc------------cccEEEeccccccCCCCCcchhhhhHHHHHHHHHHHHhhc-cccHHHHHHHHHHhhhhhHHHH
Q 014324 303 LKQIF------------WSNVVLIGDAAHPTTPHGLRSTNMSILDAMVLGKSLEKWG-VEGLLSALEEYQTVRLPVTSKQ 369 (426)
Q Consensus 303 ~~~~~------------~~rv~LvGDAAh~~~P~~G~G~~~ai~Da~~La~~L~~~~-~~~~~~~L~~Y~~~R~~~~~~~ 369 (426)
.++|. .+||+|+|||||.++|++|||+|+||+||.+|+|+|.... +...+.+|++|+++|+++++.+
T Consensus 324 a~~~~~~~~~~~~~~~~~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g~a~~~lL~~Ye~eR~~~a~~~ 403 (639)
T 2dkh_A 324 CAKYDDVVDAVATPDSPLPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRKQCAPELLHTYSSERQVVAQQL 403 (639)
T ss_dssp CSCSBSCCCSSCCTTSCCCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTTSBCGGGGHHHHHHHHHHHHHH
T ss_pred hhhhhccccccccccCccCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHH
Confidence 45566 7999999999999999999999999999999999998762 3455788999999999999999
Q ss_pred HHHHHHhhhhhhcCCCCCCCCCCCCCCChhhhHHHhhccCCcccCCCccc
Q 014324 370 VLHSRRLGRIKQGLALPDREPFNTKTASPQDCQELQQKTMPFFADLPSLV 419 (426)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (426)
++.++.+.++++....... .. ......+.+.+.+...|++|++..+
T Consensus 404 ~~~s~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~g~~~~Y 449 (639)
T 2dkh_A 404 IDFDREWAKMFSDPAKEGG--QG--GVDPKEFQKYFEQHGRFTAGVGTHY 449 (639)
T ss_dssp HHHHHHSCC------------------CHHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHHhcCCCcccc--cc--cccHHHHHHHHHHhccccccCCccc
Confidence 9999999988875421110 00 1123344444444444566655544
No 13
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=100.00 E-value=4.5e-40 Score=315.49 Aligned_cols=326 Identities=21% Similarity=0.242 Sum_probs=228.0
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecc
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQ 83 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 83 (426)
|..+||+||||||+|+++|+.|+++|++|+||||.+.+.. .++++.+.++++++|+++|+ .+.+...+.+.....
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~---~~~~~~l~~~~~~~l~~~g~--~~~~~~~~~~~~~~~ 83 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRA---FGAGIYLWHNGLRVLEGLGA--LDDVLQGSHTPPTYE 83 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCC---CSSEEEEEHHHHHHHHHTTC--HHHHHTTCBCCSCEE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCC---CCceEEeCccHHHHHHHcCC--HHHHHhhCCCccceE
Confidence 4568999999999999999999999999999999988753 56789999999999999987 555555444322111
Q ss_pred ccccccccccccccccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeec
Q 014324 84 NQATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGN 161 (426)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d 161 (426)
.... +..+...... ..+...++|..+.+.|.+.+. .|+ ++++++|++++. ++ +|+ +.+|++ ++||
T Consensus 84 ~~~~-g~~~~~~~~~--~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~---~~~g~~--~~ad 150 (379)
T 3alj_A 84 TWMH-NKSVSKETFN--GLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG---RLT---LQTGEV--LEAD 150 (379)
T ss_dssp EEET-TEEEEEECGG--GCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEE---ETTSCE--EECS
T ss_pred EEeC-CceeeeccCC--CCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEE---ECCCCE--EEcC
Confidence 1111 2221111100 234677899999999988775 478 999999999984 33 444 567764 8999
Q ss_pred EEEeccCCchhhhhhhcCCCcccccceEEEEEEeeCC----CCCchHHHhhhhcccCCCCceeeE--ecCCCceEEEEEe
Q 014324 162 LLVAADGCLSSIRQSFLSDFKLRYSGYCAWRGVLDFS----GIEDSEIIKGMRRVYPDLGKCLYF--DLASGTHSVFYEL 235 (426)
Q Consensus 162 ~vI~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 235 (426)
+||+|||.+|.+|+++.....+.+.++..|++.++.. +... + ...... +++++++++++|+
T Consensus 151 ~vV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~--~~~~~~~~~~~~~~~~~~~p~ 217 (379)
T 3alj_A 151 LIVGADGVGSKVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGE-----------W--DNTIDMWNFWPRVQRILYSPC 217 (379)
T ss_dssp EEEECCCTTCHHHHHHCCCEEEEEEEEEEEEEEEECCHHHHCSSC-----------T--TSEEEEECCSSSCCEEEEEEC
T ss_pred EEEECCCccHHHHHHhcCCCCcCcCCcEEEEEEechhhccCCcCC-----------c--ccccccceEECCCCEEEEEEC
Confidence 9999999999999998764455677777788877653 1110 1 001111 4567888999999
Q ss_pred cCCeeeEEEEEecCCCCcCCCcceeccCHHHHHHHHHHHhhcccHHHH---HHhhhc--CcceEeeeeccCCCCcccccc
Q 014324 236 LNKRLNWVWYINQPEPIMKGNSVTMRVSNDMIKNMHEEAEKVWLPEFV---KVIKET--KEPFINAMYDCDPLKQIFWSN 310 (426)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~p~~~~~~~r 310 (426)
+++...|.+......+ . . +.+.+.+. .|.+.+. +++... .....+.++...++++|..+|
T Consensus 218 ~~~~~~~~~~~~~~~~---~-------~-~~l~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r 282 (379)
T 3alj_A 218 NENELYLGLMAPAADP---R-------G-SSVPIDLE----VWVEMFPFLEPCLIEAAKLKTARYDKYETTKLDSWTRGK 282 (379)
T ss_dssp SSSEEEEEEEECTTCT---T-------T-TCSSCCHH----HHHHHCGGGHHHHHHHHTCTTCCEEEEEEEEESCSEETT
T ss_pred CCCcEEEEEEecCCCC---C-------H-HHHHHHHh----cCCchhccHHHHHhhCCccceEEecccccCCCCCcccCc
Confidence 9988777666543110 0 0 11111111 1212111 333322 123344444444567788999
Q ss_pred EEEeccccccCCCCCcchhhhhHHHHHHHHHHHHhhccccHHHHHHHHHHhhhhhHHHHHHHHHHhh
Q 014324 311 VVLIGDAAHPTTPHGLRSTNMSILDAMVLGKSLEKWGVEGLLSALEEYQTVRLPVTSKQVLHSRRLG 377 (426)
Q Consensus 311 v~LvGDAAh~~~P~~G~G~~~ai~Da~~La~~L~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~~~~~~ 377 (426)
++|||||||.++|+.|||+|+||+||.+|+++|... .+.+.+|+.|+++|++++..+++.+.+..
T Consensus 283 v~lvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~--~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~ 347 (379)
T 3alj_A 283 VALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLEEG--SSVEDALVAWETRIRPITDRCQALSGDYA 347 (379)
T ss_dssp EEECTHHHHCCCGGGSCHHHHHHHHHHHHHHHTTSS--SCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcccCCCCcchhhhHHHHHHHHHHHHHHhccc--cCHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 999999999999999999999999999999999864 36688999999999999999999885443
No 14
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=100.00 E-value=5e-40 Score=328.88 Aligned_cols=339 Identities=18% Similarity=0.116 Sum_probs=219.6
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeeccc
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQN 84 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 84 (426)
.++||+||||||+||++|+.|+++|++|+||||.+.+.. .++++.++++++++|+++|+ .+.+...........
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~---~~r~~~l~~~s~~~l~~lGl--~~~l~~~~~~~~~~~- 121 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVG---HDRAGALHIRTVETLDLRGL--LDRFLEGTQVAKGLP- 121 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCC---SSSCCCBCHHHHHHHHTTTC--HHHHTTSCCBCSBCC-
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCC---CceEEEECHHHHHHHHHcCC--hHHHHhcCcccCCce-
Confidence 357999999999999999999999999999999988753 56788999999999999988 666665554432110
Q ss_pred cccccc---cccccccccCCCcchhccHHHHHHHHHhcCCC-Ce-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEe
Q 014324 85 QATDNA---KVTRTLARDDNFNFRAAHWADLHGLLYNALPP-EI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIK 159 (426)
Q Consensus 85 ~~~~~~---~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~-~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~ 159 (426)
..+. .+............+.++|..+++.|.+.+.+ |+ |+++++|++++.++ ..|+|+++ ..+|+ .+++
T Consensus 122 --~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~--~~v~v~~~-~~~G~-~~~~ 195 (570)
T 3fmw_A 122 --FAGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDA--EAVEVTVA-GPSGP-YPVR 195 (570)
T ss_dssp --BTTBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCS--SCEEEEEE-ETTEE-EEEE
T ss_pred --eCCcccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC--CeEEEEEE-eCCCc-EEEE
Confidence 1111 11111111111234568999999999987764 88 99999999998543 45666532 25663 3589
Q ss_pred ecEEEeccCCchhhhhhhcCCCcccccceEEEEEEeeCCCCCchHHHhhhhcccCCCCceeeEecCCCceEEE-EEecCC
Q 014324 160 GNLLVAADGCLSSIRQSFLSDFKLRYSGYCAWRGVLDFSGIEDSEIIKGMRRVYPDLGKCLYFDLASGTHSVF-YELLNK 238 (426)
Q Consensus 160 ~d~vI~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 238 (426)
||+||+|||.+|.||+++..+..........+...+..+... . ...+...+.+++++ +|++++
T Consensus 196 a~~vV~ADG~~S~vR~~lGi~~~~~~~~~~~~~~~v~~~~~~--------------~--~~~~~~~~~G~~~~~~P~~~g 259 (570)
T 3fmw_A 196 ARYGVGCDGGRSTVRRLAADRFPGTEATVRALIGYVTTPERE--------------V--PRRWERTPDGILVLAFPPEGG 259 (570)
T ss_dssp ESEEEECSCSSCHHHHHTTCCCCCCCCCEEEEEEECCCCSCS--------------S--CCCCCCCCSSCEEECCCC---
T ss_pred eCEEEEcCCCCchHHHHcCCCCccceeeeEEEEEEEEecCCC--------------c--ceEEEecCCEEEEEEeecCCC
Confidence 999999999999999998544433222233333333322110 0 01112345556666 788887
Q ss_pred ee-eEEEEEecCCCCcCCCcceeccCHHHHHHHHHHHhhcccHHHHHHhhhcCcceEeeee--ccCCCCccccccEEEec
Q 014324 239 RL-NWVWYINQPEPIMKGNSVTMRVSNDMIKNMHEEAEKVWLPEFVKVIKETKEPFINAMY--DCDPLKQIFWSNVVLIG 315 (426)
Q Consensus 239 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~rv~LvG 315 (426)
.. +++++........ .....+.+.+.+.+ ...+... +...........+ ...+.++|..+||+|+|
T Consensus 260 ~~~~i~~~~~~~~~~~----~~~~~~~~~~~~~l---~~~~~~~----~~~~~~~~~~~~~~~~~~~a~~~~~grv~LvG 328 (570)
T 3fmw_A 260 LGPGWSSSSTGHSPAA----DEGPVTLEDLGAAV---ARVRGTP----LTLTEPVSWLSRFGDASRQAKRYRSGRVLLAG 328 (570)
T ss_dssp ---CEEEEEESCC---------CCCCHHHHHHHT---TSSSSCC----CCCCSCCEEEEEECCCCEECSCSEETTEEECG
T ss_pred eEEEEEEEeCCCCccc----cccCCCHHHHHHHH---HHHhhcc----cccceeeeeeEEeecccccccccccCCEEEEE
Confidence 76 7777665322110 01112232222221 1111111 1111111011111 13345678889999999
Q ss_pred cccccCCCCCcchhhhhHHHHHHHHHHHHhhc-cccHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhhc
Q 014324 316 DAAHPTTPHGLRSTNMSILDAMVLGKSLEKWG-VEGLLSALEEYQTVRLPVTSKQVLHSRRLGRIKQG 382 (426)
Q Consensus 316 DAAh~~~P~~G~G~~~ai~Da~~La~~L~~~~-~~~~~~~L~~Y~~~R~~~~~~~~~~~~~~~~~~~~ 382 (426)
||||.++|+.|||+|+||+||.+|+|+|.... +...+.+|+.|+++|++++..++..+..+.++|..
T Consensus 329 DAAH~~~P~~GqG~n~gl~DA~~La~~La~~~~g~~~~~lL~~Ye~eR~~~~~~~~~~s~~~~~l~~~ 396 (570)
T 3fmw_A 329 DAAHVHFPIGGQGLNTGLQDAVNLGWKLAARVRGWGSEELLDTYHDERHPVAERVLLNTRAQLALMRP 396 (570)
T ss_dssp GGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCS
T ss_pred ecceecCCCcCcCHhHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999998762 34678999999999999999999999999888865
No 15
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=100.00 E-value=2.7e-39 Score=311.82 Aligned_cols=343 Identities=16% Similarity=0.118 Sum_probs=214.5
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
++||+||||||+|+++|+.|+++|++|+||||.+.+......+.+ .+.++++++|+++|+ .+.+.+...+... ...
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g-~l~~~~~~~l~~lg~--~~~~~~~~~~~~~-~~~ 77 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAG-VLEQGMVDLLREAGV--DRRMARDGLVHEG-VEI 77 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCC-EECHHHHHHHHHTTC--CHHHHHHCEEESC-EEE
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceE-eECHHHHHHHHHcCC--cHHHHhcCCccce-EEE
Confidence 379999999999999999999999999999998753100112233 489999999999998 5555544433211 111
Q ss_pred cccccccccccc-ccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecE
Q 014324 86 ATDNAKVTRTLA-RDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNL 162 (426)
Q Consensus 86 ~~~~~~~~~~~~-~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~ 162 (426)
...+........ .........+++..+.+.|.+.+. .++ ++++++|++++.++ +..+.|++. .+|+..+++||+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~-~~~~~v~~~--~~g~~~~~~a~~ 154 (394)
T 1k0i_A 78 AFAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQ-GERPYVTFE--RDGERLRLDCDY 154 (394)
T ss_dssp EETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTT-SSSCEEEEE--ETTEEEEEECSE
T ss_pred EECCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEec-CCceEEEEe--cCCcEEEEEeCE
Confidence 111111000000 001223445677888888877654 477 99999999998532 234555531 477755699999
Q ss_pred EEeccCCchhhhhhhcCCCcccccce--EEEEEEeeCCCCCchHHHhhhhcccCCCCceeeEecCCCceEEEEEecCCee
Q 014324 163 LVAADGCLSSIRQSFLSDFKLRYSGY--CAWRGVLDFSGIEDSEIIKGMRRVYPDLGKCLYFDLASGTHSVFYELLNKRL 240 (426)
Q Consensus 163 vI~AdG~~S~vR~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (426)
||+|||.+|.+|+++.....+.+.+. ..|.+++...+.. ... ..+...++++.++.+..++..
T Consensus 155 vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~-~~~~~~~~g~~~~~~~~~~~~ 219 (394)
T 1k0i_A 155 IAGCDGFHGISRQSIPAERLKVFERVYPFGWLGLLADTPPV--------------SHE-LIYANHPRGFALCSQRSATRS 219 (394)
T ss_dssp EEECCCTTCSTGGGSCGGGCEEEEEEEEEEEEEEEESSCCS--------------CSS-CEEECCTTCCEEEEEEETTEE
T ss_pred EEECCCCCcHHHHhcCccccccccccccceeEEEecCCCCC--------------ccc-eEEEEcCCceEEEEecCCCcE
Confidence 99999999999999854333334333 3455544321111 011 122334556666666566666
Q ss_pred eEEEEEecCCCCcCCCcceeccCHH-HHHHHHHHHhhcccHHHHHHhhhcCcc--eEeeeeccCCCCccccccEEEeccc
Q 014324 241 NWVWYINQPEPIMKGNSVTMRVSND-MIKNMHEEAEKVWLPEFVKVIKETKEP--FINAMYDCDPLKQIFWSNVVLIGDA 317 (426)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~~rv~LvGDA 317 (426)
+|.+....... ....+.+ ..+++. +.+.+.....+...... ...+.. ....++|..+|++|+|||
T Consensus 220 ~~~~~~~~~~~-------~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~grv~LvGDA 287 (394)
T 1k0i_A 220 QYYVQVPLSEK-------VEDWSDERFWTELK----ARLPSEVAEKLVTGPSLEKSIAPLR-SFVVEPMQHGRLFLAGDA 287 (394)
T ss_dssp EEEEEECTTCC-------GGGCCHHHHHHHHH----HTSCHHHHHHCCCCCEEEEEEEEEE-EEEEECSEETTEEECGGG
T ss_pred EEEEEeCCCCC-------ccccCHHHHHHHHH----HhhCcccccccccCcceeeEEEEhh-hhhccccccCCEEEEech
Confidence 66655432211 0111222 222222 22333332222111110 111111 122445778999999999
Q ss_pred cccCCCCCcchhhhhHHHHHHHHHHHHhhccccHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhhc
Q 014324 318 AHPTTPHGLRSTNMSILDAMVLGKSLEKWGVEGLLSALEEYQTVRLPVTSKQVLHSRRLGRIKQG 382 (426)
Q Consensus 318 Ah~~~P~~G~G~~~ai~Da~~La~~L~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~~~~~~~~~~~ 382 (426)
||.++|+.|||+|+||+||.+|+++|......+.+.+|+.|+++|++++..+++.+..+..+++.
T Consensus 288 Ah~~~P~~GqG~~~ai~da~~La~~L~~~~~~~~~~~L~~Y~~~r~~~~~~~~~~s~~~~~~~~~ 352 (394)
T 1k0i_A 288 AHIVPPTGAKGLNLAASDVSTLYRLLLKAYREGRGELLERYSAICLRRIWKAERFSWWMTSVLHR 352 (394)
T ss_dssp TEECCGGGTCHHHHHHHHHHHHHHHHHHHHHHCCGGGGGGHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred hhcCCCcccchHHHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999876322346789999999999999999999988888763
No 16
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=100.00 E-value=7.4e-38 Score=301.68 Aligned_cols=338 Identities=13% Similarity=0.050 Sum_probs=205.9
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecc
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQ 83 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 83 (426)
|++|||+|||||||||++|+.|+++|++|+||||++.++....+| ..++++ +++.+++....... ........
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g--~~l~~~---~l~~l~~~~~~~~~--~~~~~~~~ 74 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCG--EGLSKG---ILNEADIKADRSFI--ANEVKGAR 74 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSC--CEEETH---HHHHTTCCCCTTTE--EEEESEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCcee--cccCHH---HHHHcCCCchhhhh--hcccceEE
Confidence 677999999999999999999999999999999998876433334 345554 56666652111111 11111000
Q ss_pred ccccccc-cccccccccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEee
Q 014324 84 NQATDNA-KVTRTLARDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKG 160 (426)
Q Consensus 84 ~~~~~~~-~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~ 160 (426)
....++. ..............+.++|..+++.|.+.+. .|+ ++++++++++..+++. .+.+.. ..+++..+++|
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~-~~~v~~--~~~~~~~~~~a 151 (397)
T 3oz2_A 75 IYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGK-VAGAKI--RHNNEIVDVRA 151 (397)
T ss_dssp EECTTCSSCEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTE-EEEEEE--EETTEEEEEEE
T ss_pred EEeCCCceEeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccce-eeeeee--cccccceEEEE
Confidence 1111111 1111111112233467899999999988765 488 9999999998865432 222322 34566667999
Q ss_pred cEEEeccCCchhhhhhhcCCCc-ccccceEEEEEE-eeCCCCCchHHHhhhhcccCCCCceeeEe---cCCCceEEEEEe
Q 014324 161 NLLVAADGCLSSIRQSFLSDFK-LRYSGYCAWRGV-LDFSGIEDSEIIKGMRRVYPDLGKCLYFD---LASGTHSVFYEL 235 (426)
Q Consensus 161 d~vI~AdG~~S~vR~~l~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 235 (426)
|+||+|||.+|.+|+++..... ..+.....+... ......+ + ....++ ..++++.+++|.
T Consensus 152 ~~vIgAdG~~S~vr~~~g~~~~~~~~~~~~~~~~~~~~~~~~~------------~---~~~~~~~~~~~~~g~~~~~~~ 216 (397)
T 3oz2_A 152 KMVIAADGFESEFGRWAGLKSVILARNDIISALQYRMINVDVD------------P---DYTDFYLGSIAPAGYIWVFPK 216 (397)
T ss_dssp EEEEECCCTTCHHHHHHTCGGGCCCGGGEEEEEEEEEESCCCC------------T---TEEEEECSTTSTTEEEEEEEE
T ss_pred eEEEeCCccccHHHHHcCCCcccccceeeeeeEEEEeeccccC------------c---ccceeeeeccCCCceEEEeec
Confidence 9999999999999999853322 122222222111 1111100 1 111122 356788899999
Q ss_pred cCCeeeEEEEEecCCCCcCCCcceeccCHHHHHHHHHHHhhcccHHHHHHhhhcCcce-EeeeeccCCCCccccccEEEe
Q 014324 236 LNKRLNWVWYINQPEPIMKGNSVTMRVSNDMIKNMHEEAEKVWLPEFVKVIKETKEPF-INAMYDCDPLKQIFWSNVVLI 314 (426)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~rv~Lv 314 (426)
+++..++.+....+... ....+++++...... .|.+.. ...... ...+....+..++..+|++|+
T Consensus 217 ~~~~~~vg~~~~~~~~~----------~~~~~~~~l~~~~~~-~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~v~lv 282 (397)
T 3oz2_A 217 GEGMANVGIGSSINWIH----------NRFELKNYLDRFIEN-HPGLKK---GQDIQLVTGGVSVSKVKMPITMPGLMLV 282 (397)
T ss_dssp ETTEEEEEEEEETTTSC----------SHHHHHHHHHHHHHT-CHHHHT---SEEEEEEEEEEECCCCCSCCEETTEEEC
T ss_pred ccceeEEEEeeccchhh----------hhhhHHHHHHHHHHh-Cccccc---cceeeeeeccccccCcccceeeeeEEEc
Confidence 88887777655433221 223333333332221 222221 111111 111211233345677999999
Q ss_pred ccccccCCCCCcchhhhhHHHHHHHHHHHHhhc--cccHHHHHHHHHHhhhhhHHHHHHHHHHhhhhh
Q 014324 315 GDAAHPTTPHGLRSTNMSILDAMVLGKSLEKWG--VEGLLSALEEYQTVRLPVTSKQVLHSRRLGRIK 380 (426)
Q Consensus 315 GDAAh~~~P~~G~G~~~ai~Da~~La~~L~~~~--~~~~~~~L~~Y~~~R~~~~~~~~~~~~~~~~~~ 380 (426)
|||||.++|+.|||+|+||+||..||+.|.++. ++..+++|+.|++.++++..+.........+.+
T Consensus 283 GDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~~~~~~~~L~~Ye~~~~~~~~~~~~~~~~~~~~~ 350 (397)
T 3oz2_A 283 GDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDYSPQMMQKYEKLIKERFERKHLRNWVAKEKL 350 (397)
T ss_dssp GGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998762 355689999999999888765544444443333
No 17
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=100.00 E-value=2.3e-36 Score=300.34 Aligned_cols=348 Identities=12% Similarity=0.071 Sum_probs=228.0
Q ss_pred CCCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHH-HHHHHhcCCchhhhccCcceee
Q 014324 3 KKEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQR-IIQSWLNGRPHLLHLATVPLTI 81 (426)
Q Consensus 3 ~~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~-~l~~~~~~~~~~~~~~~~~~~~ 81 (426)
.+.++||+||||||+|+++|+.|+++|++|+||||.+.+. .+.+..+.+.... +++.+|+ .+.+.........
T Consensus 4 ~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~----~~~g~~~~~~~~~~~l~~lgl--~~~~~~~~~~~~~ 77 (512)
T 3e1t_A 4 RPEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPR----HQIGESLLPATVHGICAMLGL--TDEMKRAGFPIKR 77 (512)
T ss_dssp -CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSC----CCSCCBCCHHHHTTHHHHTTC--HHHHHTTTCCEEC
T ss_pred CCccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCC----CCCCcccCcchHHHHHHHhCc--HHHHHHcCCcccc
Confidence 3456899999999999999999999999999999998654 2345667777665 8888887 5555555443321
Q ss_pred ccc--cccccccc--ccccc-ccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCc-eEEEEEEeccCC
Q 014324 82 DQN--QATDNAKV--TRTLA-RDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKT-TVTVKAKVLQTD 153 (426)
Q Consensus 82 ~~~--~~~~~~~~--~~~~~-~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~-~v~v~~~~~~~g 153 (426)
... +....... ..... .......+.++|..+.+.|.+.+. .|+ ++++++|+++..+++.. .|+++ ..+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~---~~dG 154 (512)
T 3e1t_A 78 GGTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYR---NTEG 154 (512)
T ss_dssp EEEEECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEE---CSSS
T ss_pred CceEEecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEE---eCCC
Confidence 111 11111100 00000 111223456899999999988775 488 99999999999743321 23333 5678
Q ss_pred ceEEEeecEEEeccCCchhhhhhhcCCCcccccceEEEEEEeeCCCCCchHHHhhhhcccCCCCceeeEecCCCceEEEE
Q 014324 154 EVIEIKGNLLVAADGCLSSIRQSFLSDFKLRYSGYCAWRGVLDFSGIEDSEIIKGMRRVYPDLGKCLYFDLASGTHSVFY 233 (426)
Q Consensus 154 ~~~~~~~d~vI~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (426)
+..+++||+||+|||.+|.+|+++.......+.....+.+.+....... .+..+. ......++++++++
T Consensus 155 ~~~~i~ad~VI~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~~~~----------~~~~~~-~~~~~~~~G~~~~~ 223 (512)
T 3e1t_A 155 VELMAHARFIVDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLP----------APRQGN-ILSAAFQDGWFWYI 223 (512)
T ss_dssp CEEEEEEEEEEECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCCCCS----------TTCTTS-EEEEEETTEEEEEE
T ss_pred CEEEEEcCEEEECCCcchHHHHHcCCCccCchhcceEEEEEecCCccCC----------CCCcCc-eEEEEeCCceEEEE
Confidence 7567999999999999999999983222223334455565554321110 011122 22334567899999
Q ss_pred EecCCeeeEEEEEecCCCCcCCCcceeccCHHHHHHHHHHHhhcccHHHHHHhhhcCcceE-----eeeec--cCCCCcc
Q 014324 234 ELLNKRLNWVWYINQPEPIMKGNSVTMRVSNDMIKNMHEEAEKVWLPEFVKVIKETKEPFI-----NAMYD--CDPLKQI 306 (426)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~--~~p~~~~ 306 (426)
|++++..++.+.+..+.... ....+.+.++.++. +.|.+.+.+........ ..... ..+.++|
T Consensus 224 Pl~~~~~~vg~~~~~~~~~~-----~~~~~~~~~~~~l~-----~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~ 293 (512)
T 3e1t_A 224 PLSDTLTSVGAVVSREAAEA-----IKDGHEAALLRYID-----RCPIIKEYLAPATRVTTGDYGEIRIRKDYSYCNTSF 293 (512)
T ss_dssp ECSSSEEEEEEEEEHHHHTT-----TSSCHHHHHHHHHH-----TSHHHHHHHTTCEECCSSTTSSCEEEESCCEEESCS
T ss_pred EeCCCeEEEEEEecHHHhhh-----hcCCHHHHHHHHHH-----hCchHHHHHhcCccccccccccceeecccccccccc
Confidence 99998888888775432110 01112333333332 56777777654322110 00100 1134556
Q ss_pred ccccEEEeccccccCCCCCcchhhhhHHHHHHHHHHHHhhc--cccHHHHHHHHHHhhhhhHHHHHHHHHHhhhhh
Q 014324 307 FWSNVVLIGDAAHPTTPHGLRSTNMSILDAMVLGKSLEKWG--VEGLLSALEEYQTVRLPVTSKQVLHSRRLGRIK 380 (426)
Q Consensus 307 ~~~rv~LvGDAAh~~~P~~G~G~~~ai~Da~~La~~L~~~~--~~~~~~~L~~Y~~~R~~~~~~~~~~~~~~~~~~ 380 (426)
..+|++|||||||.++|+.|||+|+|++||..|+++|.... ..+.+.+|+.|++.|+++...+.+.......+.
T Consensus 294 ~~~~vvlvGDAAh~~~P~~GqG~~~Al~dA~~La~~L~~~l~~~~~~~~aL~~Ye~~~~~~~~~~~~~~~~~y~~~ 369 (512)
T 3e1t_A 294 WKNGMALVGDAACFVDPVFSSGVHLATYSALLVARAINTCLAGEMSEQRCFEEFERRYRREYGNFYQFLVAFYDMN 369 (512)
T ss_dssp BCSSEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccCCEEEEechhhcCCCccccCHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 77999999999999999999999999999999999998763 245678999999999999998888776654443
No 18
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=100.00 E-value=1.5e-35 Score=290.53 Aligned_cols=343 Identities=13% Similarity=0.072 Sum_probs=217.4
Q ss_pred CCCCCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhc-cCcce
Q 014324 1 MEKKEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHL-ATVPL 79 (426)
Q Consensus 1 m~~~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~-~~~~~ 79 (426)
||. .++||+||||||+|+++|+.|+++|++|+|+||.+.+.... ..++..+ +.+.+++++.. +.... .....
T Consensus 2 mm~-~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~-~~~g~~l---~~~~l~~lg~~--~~~~~~~~~~~ 74 (453)
T 3atr_A 2 MKE-LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGD-KPCGDAV---SKAHFDKLGMP--YPKGEELENKI 74 (453)
T ss_dssp CEE-EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTC-SCCCCEE---EHHHHHHTTCC--CCCGGGEEEEE
T ss_pred CCC-CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCc-ccccccc---cHHHHHHhcCC--CCchHHHHhhh
Confidence 443 35899999999999999999999999999999998753211 1223333 45778888763 21111 00000
Q ss_pred eeccccccccccccccccccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEE-EEEEeccCCceE
Q 014324 80 TIDQNQATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVT-VKAKVLQTDEVI 156 (426)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~-v~~~~~~~g~~~ 156 (426)
. ....+...... ... .....+.++|..+.+.|.+.+. .|+ ++++++|+++..+++ .++ |++.+..+|+..
T Consensus 75 ~-~~~~~~~~~~~--~~~--~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~--~v~gv~~~~~~~G~~~ 147 (453)
T 3atr_A 75 N-GIKLYSPDMQT--VWT--VNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDG--YVKGAVLFNRRTNEEL 147 (453)
T ss_dssp E-EEEEECTTSSC--EEE--EEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETT--EEEEEEEEETTTTEEE
T ss_pred c-ceEEECCCCce--EEe--ECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECC--EEEEEEEEEcCCCceE
Confidence 0 00001111000 000 0112456889999999988775 478 999999999986433 433 443322267755
Q ss_pred EEeecEEEeccCCchhhhhhhcCCCc---ccc--cceEEEEEEeeCCCCCchHHHhhhhcccCCCCceeeEec----CCC
Q 014324 157 EIKGNLLVAADGCLSSIRQSFLSDFK---LRY--SGYCAWRGVLDFSGIEDSEIIKGMRRVYPDLGKCLYFDL----ASG 227 (426)
Q Consensus 157 ~~~~d~vI~AdG~~S~vR~~l~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 227 (426)
+++||+||+|||.+|.+|+.+..... +.+ .....|++.+..+....+ + . ...+++ .++
T Consensus 148 ~~~ad~VV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~--~-~~~~~~~~~~~~~ 214 (453)
T 3atr_A 148 TVYSKVVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIED----------H--D-YLRIFIDQETSPG 214 (453)
T ss_dssp EEECSEEEECCGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCTT----------T--T-EEEEECCTTTSTT
T ss_pred EEEcCEEEECcCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCCccC----------C--C-eEEEEECCCCCCC
Confidence 69999999999999999998854331 111 224566666654422100 0 1 112333 367
Q ss_pred ceEEEEEecCCeeeEEEEEecCCCCcCCCcceeccCHHHHHHHHHHHhhcccHHHHHHhhhcCcceEeeeeccCCCCccc
Q 014324 228 THSVFYELLNKRLNWVWYINQPEPIMKGNSVTMRVSNDMIKNMHEEAEKVWLPEFVKVIKETKEPFINAMYDCDPLKQIF 307 (426)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 307 (426)
++++++|.+++..++.+........ ....+.+.++++...+.|... +++ ....+.+....++++|.
T Consensus 215 g~~~~~P~~~~~~~vg~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~--~~~----~~~~~~~p~~~~~~~~~ 280 (453)
T 3atr_A 215 GYWWYFPKGKNKVNVGLGIQGGMGY--------PSIHEYYKKYLDKYAPDVDKS--KLL----VKGGALVPTRRPLYTMA 280 (453)
T ss_dssp SCEEEEEEETTEEEEEEEEESSSCC--------CCHHHHHHHHHHHHCTTEEEE--EEE----EEEEEEEECSSCCSCSE
T ss_pred cEEEEEECCCCeEEEEEEecCCCCC--------CCHHHHHHHHHHhhhhhcCCC--eEE----eccceeccCCCCCCcee
Confidence 8899999999888887766532210 012233333332222222110 000 00111122245677888
Q ss_pred cccEEEeccccccCCCCCcchhhhhHHHHHHHHHHHHhhc--cccHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhhcCC
Q 014324 308 WSNVVLIGDAAHPTTPHGLRSTNMSILDAMVLGKSLEKWG--VEGLLSALEEYQTVRLPVTSKQVLHSRRLGRIKQGLA 384 (426)
Q Consensus 308 ~~rv~LvGDAAh~~~P~~G~G~~~ai~Da~~La~~L~~~~--~~~~~~~L~~Y~~~R~~~~~~~~~~~~~~~~~~~~~~ 384 (426)
.+|++|+|||||.++|+.|||+|+||+||..|+++|.... ++..+++|+.|+++|++++...+..+..+.+++..+.
T Consensus 281 ~~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~l~~~~~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~~~~~~ 359 (453)
T 3atr_A 281 WNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETGDFSASGLWDMNICYVNEYGAKQASLDIFRRFLQKLS 359 (453)
T ss_dssp ETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSTTTTTHHHHHHHHHTHHHHHHHHHHHHHHTTCC
T ss_pred cCCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 8999999999999999999999999999999999998752 2233678999999999999999998888888776543
No 19
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=100.00 E-value=5.9e-34 Score=274.69 Aligned_cols=340 Identities=14% Similarity=0.054 Sum_probs=212.6
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecc
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQ 83 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 83 (426)
|.++||+||||||+|+++|+.|+++|++|+|+||.+.++....++ ..+.+ +.++++|+. ..............
T Consensus 2 m~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~--~~~~~---~~~~~lg~~--~~~~~~~~~~~~~~ 74 (397)
T 3cgv_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCG--EGLSK---GILNEADIK--ADRSFIANEVKGAR 74 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSC--CEEET---HHHHHTTCC--CCTTTEEEEESEEE
T ss_pred CccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccc--cccCH---HHHHHcCCC--CChHHhhhhcceEE
Confidence 456899999999999999999999999999999999765422233 23333 567777762 11111111110000
Q ss_pred cccccccc-ccccccccCCCcchhccHHHHHHHHHhcCCC-Ce-eEeeeeEEEEEEecCCceEE-EEEEeccCCceEEEe
Q 014324 84 NQATDNAK-VTRTLARDDNFNFRAAHWADLHGLLYNALPP-EI-FLRGHQYLSFCISEVKTTVT-VKAKVLQTDEVIEIK 159 (426)
Q Consensus 84 ~~~~~~~~-~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~-~~-i~~~~~v~~~~~~~~~~~v~-v~~~~~~~g~~~~~~ 159 (426)
.....+.. +............+.++|..+.+.|.+.+.+ |+ ++++++|++++.++ ..++ |++.+ .+...+++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~--~~~~~~~~ 150 (397)
T 3cgv_A 75 IYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN--GKVAGAKIRH--NNEIVDVR 150 (397)
T ss_dssp EECTTCSSCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET--TEEEEEEEEE--TTEEEEEE
T ss_pred EEcCCCCEEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeC--CEEEEEEEEE--CCeEEEEE
Confidence 11111111 1110000012235678999999999887764 88 99999999998753 3454 55433 23344599
Q ss_pred ecEEEeccCCchhhhhhhcCCC-cccccce-EEEEEEeeCCCCCchHHHhhhhcccCCCCceeeEec---CCCceEEEEE
Q 014324 160 GNLLVAADGCLSSIRQSFLSDF-KLRYSGY-CAWRGVLDFSGIEDSEIIKGMRRVYPDLGKCLYFDL---ASGTHSVFYE 234 (426)
Q Consensus 160 ~d~vI~AdG~~S~vR~~l~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 234 (426)
||+||+|||.+|.+|+.+.... ......+ ..+...+.....+ .....+++ .++++.+++|
T Consensus 151 a~~vV~A~G~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~g~~~~~P 215 (397)
T 3cgv_A 151 AKMVIAADGFESEFGRWAGLKSVILARNDIISALQYRMINVDVD---------------PDYTDFYLGSIAPAGYIWVFP 215 (397)
T ss_dssp EEEEEECCCTTCHHHHHHTCCTTCCCGGGEEEEEEEEEESCCCC---------------TTEEEEECSTTSTTEEEEEEE
T ss_pred cCEEEECCCcchHhHHhcCCCccCCChhheeEEEEEEeccCCCC---------------CCcEEEEeCCcCCCceEEEEE
Confidence 9999999999999999985443 2212222 2222233222111 11122332 5778899999
Q ss_pred ecCCeeeEEEEEecCCCCcCCCcceeccCHHHHHHHHHHHhhcccHHHHHHhhhcCcceEeeeec-cCCCCccccccEEE
Q 014324 235 LLNKRLNWVWYINQPEPIMKGNSVTMRVSNDMIKNMHEEAEKVWLPEFVKVIKETKEPFINAMYD-CDPLKQIFWSNVVL 313 (426)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~rv~L 313 (426)
.+++..++.+....+... ......+.++.... +.+.+. ............+ ..+.++|..+|+++
T Consensus 216 ~~~~~~~vg~~~~~~~~~----------~~~~~~~~l~~~~~-~~~~~~---~~~~~~~~~~~~p~~~~~~~~~~~~v~l 281 (397)
T 3cgv_A 216 KGEGMANVGIGSSINWIH----------NRFELKNYLDRFIE-NHPGLK---KGQDIQLVTGGVSVSKVKMPITMPGLML 281 (397)
T ss_dssp EETTEEEEEEEEETTTCS----------CHHHHHHHHHHHHH-TCHHHH---TSEEEEEEEEEEECCCCCSCCEETTEEE
T ss_pred CCCCeEEEEEEecccccc----------CCCCHHHHHHHHHH-hCcCCC---CCeEEeeeeeeeecCCCccceeeCCEEE
Confidence 999988888776543210 11222222222222 122221 1110111111111 24566788899999
Q ss_pred eccccccCCCCCcchhhhhHHHHHHHHHHHHhhc--cccHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhhcC
Q 014324 314 IGDAAHPTTPHGLRSTNMSILDAMVLGKSLEKWG--VEGLLSALEEYQTVRLPVTSKQVLHSRRLGRIKQGL 383 (426)
Q Consensus 314 vGDAAh~~~P~~G~G~~~ai~Da~~La~~L~~~~--~~~~~~~L~~Y~~~R~~~~~~~~~~~~~~~~~~~~~ 383 (426)
+|||||.++|+.|||+|+|++||..|++.|.+.. ++..+..|+.|+++|+++....++.++.+.+++..+
T Consensus 282 iGDAa~~~~P~~G~G~~~a~~~a~~la~~l~~~~~~~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (397)
T 3cgv_A 282 VGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDYSPQMMQKYEKLIKERFERKHLRNWVAKEKLAML 353 (397)
T ss_dssp CGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999998752 345678999999999999988888888887776554
No 20
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=100.00 E-value=1.2e-34 Score=281.89 Aligned_cols=336 Identities=10% Similarity=-0.006 Sum_probs=215.1
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecc
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQ 83 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 83 (426)
+.++||+||||||+|+++|+.|+++|++|+|+||.+.+. .+.|..+.+.+.+.++++++ .+.+.+.+.......
T Consensus 3 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~----~~~g~~~~~~~~~~l~~~g~--~~~~~~~~~~~~~~~ 76 (421)
T 3nix_A 3 REKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPR----FVIGESLLPRCMEHLDEAGF--LDAVKAQGFQQKFGA 76 (421)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSC----CCSCCBCCGGGHHHHHHTTC--HHHHHHTTCEEECEE
T ss_pred CccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC----CcccCcccHhHHHHHHHcCC--hHHHHHcCCcccCCc
Confidence 356899999999999999999999999999999998754 24567899999999999987 566665554332111
Q ss_pred ccccccc--ccccccc-ccCCCcchhccHHHHHHHHHhcCCC-Ce-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEE
Q 014324 84 NQATDNA--KVTRTLA-RDDNFNFRAAHWADLHGLLYNALPP-EI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEI 158 (426)
Q Consensus 84 ~~~~~~~--~~~~~~~-~~~~~~~~~~~r~~l~~~L~~~~~~-~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~ 158 (426)
....... .+..... .......+.++|..+.+.|.+.+.+ |+ ++++++|++++.+++...+.++ ..+|+..++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~---~~~g~~~~~ 153 (421)
T 3nix_A 77 KFVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIE---DINGNKREI 153 (421)
T ss_dssp EEEETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEE---ETTSCEEEE
T ss_pred EEEeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEE---cCCCCEEEE
Confidence 1111111 1100000 0112234568999999999987764 88 9999999999976554344444 578886679
Q ss_pred eecEEEeccCCchhhhhhhcCCCcccccceEEEEEEeeCCCCCchHHHhhhhcccCCCCceeeE-ecCCCceEEEEEecC
Q 014324 159 KGNLLVAADGCLSSIRQSFLSDFKLRYSGYCAWRGVLDFSGIEDSEIIKGMRRVYPDLGKCLYF-DLASGTHSVFYELLN 237 (426)
Q Consensus 159 ~~d~vI~AdG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 237 (426)
+||+||+|||.+|.+|+.+..+..........+...+....... .+.......++ ...++++.+++|.++
T Consensus 154 ~a~~vV~A~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~g~~~~~P~~~ 224 (421)
T 3nix_A 154 EARFIIDASGYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPV---------AAEMEGNRITAVVHKPKVWIWVIPFSN 224 (421)
T ss_dssp EEEEEEECCGGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC-------------CCSEEEEEEEETTEEEEEEECTT
T ss_pred EcCEEEECCCCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCC---------ccCCCCeEEEEEeCCCCEEEEEEEECC
Confidence 99999999999999999875443333233333333333211100 00101111111 234678899999999
Q ss_pred CeeeEEEEEecCCCCcCCCcceeccCHHHHHHHHHHHhhcccHHHHHHhhhcCcc---eEeeeeccCCCCccccccEEEe
Q 014324 238 KRLNWVWYINQPEPIMKGNSVTMRVSNDMIKNMHEEAEKVWLPEFVKVIKETKEP---FINAMYDCDPLKQIFWSNVVLI 314 (426)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~p~~~~~~~rv~Lv 314 (426)
+..++.+....+.... ......+.++++.. +.|.+.+.+...... ..+..+ ..+..++..++++++
T Consensus 225 ~~~~vg~~~~~~~~~~-----~~~~~~~~l~~~~~-----~~p~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~v~lv 293 (421)
T 3nix_A 225 GNTSVGFVGEPSYFDE-----YTGTPEERMRAMIA-----NEGHIAERFKSEEFLFEPRTIEGY-AISASKLYGDGFVLT 293 (421)
T ss_dssp SEEEEEEEECHHHHTT-----SCSCHHHHHHHHHH-----TCTTTHHHHTTCCBSSCCEEEECC-CBEESCSEETTEEEC
T ss_pred CCEEEEEEecHHHhhh-----cCCCHHHHHHHHHH-----hCcHHHHHHhcCccccCceeeccc-ceeeeeeccCCEEEe
Confidence 8888887664322110 00112233333322 345555555544322 111111 223456777999999
Q ss_pred ccccccCCCCCcchhhhhHHHHHHHHHHHHhhccccHHHHHHHHHHhhhhhHHH
Q 014324 315 GDAAHPTTPHGLRSTNMSILDAMVLGKSLEKWGVEGLLSALEEYQTVRLPVTSK 368 (426)
Q Consensus 315 GDAAh~~~P~~G~G~~~ai~Da~~La~~L~~~~~~~~~~~L~~Y~~~R~~~~~~ 368 (426)
|||||.++|+.|+|+|+|++||..|++.|.+.........++.|++.++.....
T Consensus 294 GDAa~~~~P~~G~G~~~A~~~a~~la~~l~~~~~~~~~~~~~~y~~~~~~~~~~ 347 (421)
T 3nix_A 294 GNATEFLDPIFSSGATFAMESGSKGGKLAVQFLKGEEVNWEKDFVEHMMQGIDT 347 (421)
T ss_dssp GGGTCBCCSTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHTHHHHHHHHHH
T ss_pred cccccccCCcccccHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998763222234677888888765543
No 21
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=100.00 E-value=1.4e-34 Score=289.86 Aligned_cols=343 Identities=13% Similarity=0.079 Sum_probs=223.7
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeec-
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTID- 82 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~- 82 (426)
|.++||+||||||+|+++|+.|+++|++|+|||+.+.+. .+.|..+.|.+.++++.+|+ .+.+..........
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~----~~~G~~l~p~~~~~l~~lGl--~~~l~~~~~~~~~~~ 94 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPR----YRVGESLLPGTMSILNRLGL--QEKIDAQNYVKKPSA 94 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSC----CCCCCBCCHHHHHHHHHTTC--HHHHHHHCCEEECEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCC----CceeeeECHHHHHHHHHcCC--cHHHHhcCCcccCCc
Confidence 557899999999999999999999999999999997654 23567899999999999987 55555544332111
Q ss_pred -ccccccccccccccccc-----CCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCc
Q 014324 83 -QNQATDNAKVTRTLARD-----DNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDE 154 (426)
Q Consensus 83 -~~~~~~~~~~~~~~~~~-----~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~ 154 (426)
..+.............. .....+.++|..+.+.|.+.++ .|+ ++++++|+++..+ ++..+.|++.+ +|+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~--~G~ 171 (591)
T 3i3l_A 95 TFLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLS-DPDRVVLTVRR--GGE 171 (591)
T ss_dssp EEECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECC-STTCEEEEEEE--TTE
T ss_pred EEEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEEec--CCc
Confidence 11111111000000000 1122456889999999988775 588 9999999999864 34456666322 676
Q ss_pred eEEEeecEEEeccCCchhhhhhhcCCCccc-ccceEEEEEEeeCCCCCchHHHhhhhcccCCCCceeeEecCCCceEEEE
Q 014324 155 VIEIKGNLLVAADGCLSSIRQSFLSDFKLR-YSGYCAWRGVLDFSGIEDSEIIKGMRRVYPDLGKCLYFDLASGTHSVFY 233 (426)
Q Consensus 155 ~~~~~~d~vI~AdG~~S~vR~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (426)
..+++||+||+|||.+|.+|+.+....... +.....+ ..+...... ..+... ..+....++++++.+
T Consensus 172 ~~~i~AdlVV~AdG~~S~lr~~lg~~~~~~~~~~~av~-~~~~~~~~~----------~~~~~~-~~~~~~~~~G~~w~i 239 (591)
T 3i3l_A 172 SVTVESDFVIDAGGSGGPISRKLGVRQYDEFYRNFAVW-SYFKLKDPF----------EGDLKG-TTYSITFEDGWVWMI 239 (591)
T ss_dssp EEEEEESEEEECCGGGCHHHHHHTCEEEEEEEEEEEEE-EEEECCCSC----------CSTTTT-CEEEEEETTEEEEEE
T ss_pred eEEEEcCEEEECCCCcchhHHHcCCCCCCccccceEEE-EEEecCccc----------cCCCCC-ceEEEEcCCcEEEEE
Confidence 566999999999999999999984322211 2222222 222211100 001111 233445678899999
Q ss_pred EecCCeeeEEEEEecCCCCcCCCcceeccCHHHHHHHHHHHhhcccHHHHHHhhhcCc---ceEeeeeccCCCCcccccc
Q 014324 234 ELLNKRLNWVWYINQPEPIMKGNSVTMRVSNDMIKNMHEEAEKVWLPEFVKVIKETKE---PFINAMYDCDPLKQIFWSN 310 (426)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~p~~~~~~~r 310 (426)
|.+++..++.+....+... .......+++++... .+.+.+.+.+..... ....... ..+..+|..+|
T Consensus 240 Pl~~~~~sv~~~~~~~~~~--------~l~~~~~~~~~~~l~-~~~p~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~r 309 (591)
T 3i3l_A 240 PIKDDLYSVGLVVDRSKSA--------EVREQGADAFYSSTL-AKCAKAMDILGGAEQVDEVRIVQDW-SYDTEVFSADR 309 (591)
T ss_dssp ECSSSEEEEEEEEEGGGHH--------HHHHHCHHHHHHHHH-TTCHHHHHHHTTCEECSCCEEEEEE-EEEESCSEETT
T ss_pred ECCCCeEEEEEEcCHHHHh--------hhccCCHHHHHHHHH-HhCHHHHHHHhcCccccCceEeccc-ccchhhcccCC
Confidence 9998888887766532210 000011122222222 244566565543221 1111111 22345677899
Q ss_pred EEEeccccccCCCCCcchhhhhHHHHHHHHHHHHhh--ccccHHHHHHHHHHhhhhhHHHHHHHHHHhh
Q 014324 311 VVLIGDAAHPTTPHGLRSTNMSILDAMVLGKSLEKW--GVEGLLSALEEYQTVRLPVTSKQVLHSRRLG 377 (426)
Q Consensus 311 v~LvGDAAh~~~P~~G~G~~~ai~Da~~La~~L~~~--~~~~~~~~L~~Y~~~R~~~~~~~~~~~~~~~ 377 (426)
+++||||||.++|+.|||+|+|++||..|+++|... ..+..+.+++.|++.|+++...+.+......
T Consensus 310 vvLIGDAAh~~~Pl~GqGinlAl~dA~~LA~~L~~~l~~~~~~~~al~~Y~~~~~~~~~~i~~~~~~~Y 378 (591)
T 3i3l_A 310 FFLCGDAACFTDPLFSQGVHLASQSAVSAAAAIDRITRHGDEKDAVHAWYNRTYREAYEQYHQFLASFY 378 (591)
T ss_dssp EEECGGGTCBCCGGGCCHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEccccccCCCcccccHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999876 3345678999999999999998888877665
No 22
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=100.00 E-value=2e-36 Score=290.24 Aligned_cols=323 Identities=16% Similarity=0.116 Sum_probs=202.7
Q ss_pred ccEEEEcCChHHHHHHHHHHHc--CCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCc-hh-hhccCcceeec
Q 014324 7 GKAVIVGGSIAGISCAHALLRA--GWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRP-HL-LHLATVPLTID 82 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~--G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~-~~-~~~~~~~~~~~ 82 (426)
+||+||||||+||++|+.|+++ |++|+||||.+.+. ..|+++.+++++++.+...+. . +. +........ .
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~---~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~ 74 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQE---VLGWGVVLPGRPGQHPANPLS--YLDAPERLNPQFLE-D 74 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTC---CCCSEEEEESCTTTCTTCGGG--GSSCGGGGCCEEEC-C
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCC---cceeEEEeCcHHHHhhcCcch--hhhhhHHHhhcccc-c
Confidence 4899999999999999999999 99999999998764 357788888877661111111 1 11 211111111 0
Q ss_pred cccccccccccccccccCCCcchhccHHHHHHHHHhcCCC-Ce-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEee
Q 014324 83 QNQATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPP-EI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKG 160 (426)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~-~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~ 160 (426)
......+..+ ......++..++|..|.+.|.+.+++ |+ ++++++|++++. . + +++|
T Consensus 75 ~~~~~~g~~~----~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~--------------~--~~~a 132 (381)
T 3c4a_A 75 FKLVHHNEPS----LMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGE--L--------------P--LADY 132 (381)
T ss_dssp EEEEESSSEE----ECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGG--C--------------C--GGGC
T ss_pred eEEEeCCeeE----EecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchh--c--------------c--cccC
Confidence 1111122211 11113345678999999999988764 77 999998887641 1 1 1579
Q ss_pred cEEEeccCCchhhhhhhcCCCccc---ccceEEEEEEeeCCCCCchHHHhhhhcccCCCCceeeEecCCCceE--EEEEe
Q 014324 161 NLLVAADGCLSSIRQSFLSDFKLR---YSGYCAWRGVLDFSGIEDSEIIKGMRRVYPDLGKCLYFDLASGTHS--VFYEL 235 (426)
Q Consensus 161 d~vI~AdG~~S~vR~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 235 (426)
|+||+|||.+|. |+.+.....+. +.+...|.+.....+ .....+...+.++. .++|+
T Consensus 133 d~vV~AdG~~S~-R~~l~~~~g~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~g~~~~~~~p~ 194 (381)
T 3c4a_A 133 DLVVLANGVNHK-TAHFTEALVPQVDYGRNKYIWYGTSQLFD-----------------QMNLVFRTHGKDIFIAHAYKY 194 (381)
T ss_dssp SEEEECCGGGGG-TCCSSGGGCCCCEEEEEEEEEEEESSCCS-----------------SEEEEEEEETTEEEEEEEEEC
T ss_pred CEEEECCCCCch-HHhhhhhcCCCcccCCccEEEEecCCCCC-----------------cceeeEeeCCCcEEEEEEEEe
Confidence 999999999999 99874322222 234455655432210 00111111233333 35788
Q ss_pred cCCeeeEEEEEecCCCCcCCCcceeccCHHHHHHHHHHHhhcccHHHHHHhhhcCcceEeeeeccCCCCccccccEEEec
Q 014324 236 LNKRLNWVWYINQPEPIMKGNSVTMRVSNDMIKNMHEEAEKVWLPEFVKVIKETKEPFINAMYDCDPLKQIFWSNVVLIG 315 (426)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~rv~LvG 315 (426)
+++...+.+.. .+.. .....+ ...+.+...+.+...+..|.+.. +++... ...|..+...+.++|..+|++|+|
T Consensus 195 ~~~~~~~~~~~-~~~~-~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~-~l~~~~--~~~~~~~~~~~~~~~~~grv~LvG 268 (381)
T 3c4a_A 195 SDTMSTFIVEC-SEET-YARARL-GEMSEEASAEYVAKVFQAELGGH-GLVSQP--GLGWRNFMTLSHDRCHDGKLVLLG 268 (381)
T ss_dssp SSSCEEEEEEE-CHHH-HHHTTS-SSSCHHHHHHHHHHHTHHHHTTC-CCBCCT--TTCSEEEEECCCSCSEETTEEECG
T ss_pred cCCeEEEEEEC-Cccc-cccCCc-ccCChHHHHHHHHHHhcccCCCc-hhhcCC--CcceeeeccccCCCcccCCEEEEE
Confidence 77664333222 1110 000000 11123333333333333333221 222211 123455445677889999999999
Q ss_pred cccccCCCCCcchhhhhHHHHHHHHHHHHhhccccHHHHHHHHHHhhhhhHHHHHHHHHHhhhhhhcC
Q 014324 316 DAAHPTTPHGLRSTNMSILDAMVLGKSLEKWGVEGLLSALEEYQTVRLPVTSKQVLHSRRLGRIKQGL 383 (426)
Q Consensus 316 DAAh~~~P~~G~G~~~ai~Da~~La~~L~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~~~~~~~~~~~~ 383 (426)
||||.++|+.|||+|+||+||.+|+++|... .+.+.+|+.|+++|++++..++..++.+.+++..+
T Consensus 269 DAAh~~~P~~GqG~~~al~Da~~La~~L~~~--~~~~~aL~~Y~~~r~~~~~~~~~~s~~~~~~~~~~ 334 (381)
T 3c4a_A 269 DALQSGHFSIGHGTTMAVVVAQLLVKALCTE--DGVPAALKRFEERALPLVQLFRGHADNSRVWFETV 334 (381)
T ss_dssp GGTCCCCGGGCCHHHHHHHHHHHHHHHHHHS--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccccccCCCccccHHHHHHHHHHHHHHHhcc--ccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhch
Confidence 9999999999999999999999999999875 46789999999999999999999999999887764
No 23
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=100.00 E-value=3.5e-32 Score=271.21 Aligned_cols=331 Identities=13% Similarity=0.013 Sum_probs=201.1
Q ss_pred CCCCCCccEEEEcCChHHHHHHHHHHH------------cCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCC
Q 014324 1 MEKKEKGKAVIVGGSIAGISCAHALLR------------AGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGR 68 (426)
Q Consensus 1 m~~~~~~~V~IvGaG~aGl~~A~~L~~------------~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~ 68 (426)
||++..+||+||||||||+++|+.|++ .|++|+|||+...+. .+.|..+.|+++++++++|+.
T Consensus 2 mm~~~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~~----~g~g~~~~p~~~~~l~~lGi~- 76 (526)
T 2pyx_A 2 MMQKPITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVAT----IGVGEGTWPSMRSTLSKIGID- 76 (526)
T ss_dssp GGGSCCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCCC----CCSCEECCTHHHHHHHHHTCC-
T ss_pred CCCCCCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCCC----cceeeechHhHHHHHHHcCCC-
Confidence 666667899999999999999999999 999999999976543 345778999999999999984
Q ss_pred chh--hhccCccee--eccccccc----------------cc-----ccccc-c----c---------------------
Q 014324 69 PHL--LHLATVPLT--IDQNQATD----------------NA-----KVTRT-L----A--------------------- 97 (426)
Q Consensus 69 ~~~--~~~~~~~~~--~~~~~~~~----------------~~-----~~~~~-~----~--------------------- 97 (426)
+. +.+...... ..+..+.. +. .+... . .
T Consensus 77 -e~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~ 155 (526)
T 2pyx_A 77 -ENDFIRQCDASFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPK 155 (526)
T ss_dssp -HHHHHHHTTCEEECEEEEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSS
T ss_pred -HHHHHHHcCCEEECCCcccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchh
Confidence 43 444332211 00000000 00 00000 0 0
Q ss_pred ----c---cCCCcchhccHHHHHHHHHhcCC--CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEEecc
Q 014324 98 ----R---DDNFNFRAAHWADLHGLLYNALP--PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLVAAD 167 (426)
Q Consensus 98 ----~---~~~~~~~~~~r~~l~~~L~~~~~--~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI~Ad 167 (426)
. ......+.++|..+.+.|.+.+. .|+ ++++ +|++++.++++..+.|+ +.+|.+ ++||+||+||
T Consensus 156 ~~~~~~~~~~~~~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~---~~~g~~--i~ad~vV~Ad 229 (526)
T 2pyx_A 156 SIVTAQYHFQNNYGYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLI---TKQNGE--ISGQLFIDCT 229 (526)
T ss_dssp CTTSCTTCCSSCCEEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEE---ESSSCE--EECSEEEECS
T ss_pred hhhccccCCCCCeeEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEE---ECCCCE--EEcCEEEECC
Confidence 0 00112346889999999988765 477 8888 69999875444444555 456664 8999999999
Q ss_pred CCchhh-hhhhcCCCc--cc-ccceEEEEEEeeCCCCCchHHHhhhhcccCCCCceeeEecCCCceEEEEEecCCeeeEE
Q 014324 168 GCLSSI-RQSFLSDFK--LR-YSGYCAWRGVLDFSGIEDSEIIKGMRRVYPDLGKCLYFDLASGTHSVFYELLNKRLNWV 243 (426)
Q Consensus 168 G~~S~v-R~~l~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (426)
|.+|.+ |+.+..... .. ......+...+...... .+.... ......+.++.+.+|+++. ....
T Consensus 230 G~~S~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-~~~~~~~~g~~~~~pl~~~-~~~~ 296 (526)
T 2pyx_A 230 GAKSLLLGEHLQVPFLSQKSVLFNDRALAIQVPYSDAN-----------SPIASC-THSTAQPNGWIWDIGLPTR-KGVG 296 (526)
T ss_dssp GGGCCCCCCCTCCCEEECHHHHCCCEEEEEEEECSSTT-----------CCCCSS-EEEEEETTEEEEEEECSSE-EEEE
T ss_pred CcchHHHHHHhCCCcccccccccCccEEEEEeeccCCC-----------CCCCCc-eeEEecCCCeEEEeeCCCc-eEEE
Confidence 999999 555432111 00 11111222222222100 000111 1122345678888888774 3333
Q ss_pred EEEecCCCCcCCCcceeccCHHHHHHHHHHHhhcccHHHHHHhhhcCcceEeeeeccCCCCccccccEEEeccccccCCC
Q 014324 244 WYINQPEPIMKGNSVTMRVSNDMIKNMHEEAEKVWLPEFVKVIKETKEPFINAMYDCDPLKQIFWSNVVLIGDAAHPTTP 323 (426)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~rv~LvGDAAh~~~P 323 (426)
+.+.... .+.+...+.+......+.+.+. ... ...+... ....++|..+|++|||||||.++|
T Consensus 297 ~v~~~~~-----------~~~~~~~~~l~~~l~~~~~~l~----~~~-~~~~~~~-~~~~~~~~~grv~LiGDAAh~~~P 359 (526)
T 2pyx_A 297 YVYSSSH-----------TNDIDAQKTLFNYLGVDGAAAD----KLE-PRQLAIN-PGYRAKCWQNNCIAIGMAAGFIEP 359 (526)
T ss_dssp EEECTTT-----------CCHHHHHHHHHHHHTCCHHHHH----HCC-CEEEECC-CEEESCSEETTEEECGGGTEECCC
T ss_pred EEecCCC-----------CChHHHHHHHHHHHHhcCcccc----cCC-ceEEecc-cCccccccCCCEEEEEhhhcccCc
Confidence 3222111 0122223333333333433321 111 1122221 112345667999999999999999
Q ss_pred CCcchhhhhHHHHHHHHHHHHhhccccHHHHHHHHHHhhhhhHHHHHHHHH
Q 014324 324 HGLRSTNMSILDAMVLGKSLEKWGVEGLLSALEEYQTVRLPVTSKQVLHSR 374 (426)
Q Consensus 324 ~~G~G~~~ai~Da~~La~~L~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~~~ 374 (426)
+.|||+|+|++||..|++.|.... ...+.+|+.|+++|+++...+.+...
T Consensus 360 ~~GqGi~~ai~da~~La~~L~~~~-~~~~~~l~~Y~~~~~~~~~~~~~~~~ 409 (526)
T 2pyx_A 360 LEASALALIEWTASTLAQQLPPNR-MVMDTISARVNERYQQHWQQIIDFLK 409 (526)
T ss_dssp TTCHHHHHHHHHHHHHHHTCCSCH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHhhhcC-CcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987422 34578999999999999887766443
No 24
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=100.00 E-value=4.2e-32 Score=272.81 Aligned_cols=342 Identities=14% Similarity=0.116 Sum_probs=205.0
Q ss_pred CccEEEEcCChHHHHHHHHHHHc------CCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcce
Q 014324 6 KGKAVIVGGSIAGISCAHALLRA------GWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPL 79 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~------G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~ 79 (426)
.+||+|||||||||++|+.|+++ |++|+||||.+.++.. ...|..+.+++++.| + . .+.+.+.+.
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~--~~~g~~l~~~~l~~l--l-~----~~~~~g~~~ 105 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAH--TLSGACLDPRAFEEL--F-P----DWKEKGAPL 105 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTT--CCCCCEECTHHHHHH--C-T----THHHHTCCC
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCc--cccccccCHHHHHHH--H-H----HHHhcCCce
Confidence 47999999999999999999999 9999999999887542 223455788876654 1 1 111111111
Q ss_pred ee-----cccccccccccccc--cc-ccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEe
Q 014324 80 TI-----DQNQATDNAKVTRT--LA-RDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKV 149 (426)
Q Consensus 80 ~~-----~~~~~~~~~~~~~~--~~-~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~ 149 (426)
.. ..........+... .. .......+.++|..|.++|.+.++ .|+ |+++++++++..++++..+.|++.+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~ 185 (584)
T 2gmh_A 106 NTPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATND 185 (584)
T ss_dssp CEECCEEEEEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECC
T ss_pred eeeechhheeeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCC
Confidence 00 00001110000000 00 011123456889999999998776 488 9999999999875544333355321
Q ss_pred ---ccCCce-------EEEeecEEEeccCCchhhhhhhcC----CC--cccccceEEEEEEeeCCCCCchHHHhhhhccc
Q 014324 150 ---LQTDEV-------IEIKGNLLVAADGCLSSIRQSFLS----DF--KLRYSGYCAWRGVLDFSGIEDSEIIKGMRRVY 213 (426)
Q Consensus 150 ---~~~g~~-------~~~~~d~vI~AdG~~S~vR~~l~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (426)
..+|+. .+++||+||+|||.+|.+|+++.. .. .+...+. .+..++..+...
T Consensus 186 ~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~~g~-g~~~~~~v~~~~------------ 252 (584)
T 2gmh_A 186 VGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGI-GLKELWVIDEKK------------ 252 (584)
T ss_dssp EEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCEEE-EEEEEEECCGGG------------
T ss_pred ccccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchhHHh-hhhhheecCccc------------
Confidence 024532 358999999999999999998732 11 1111121 233333332110
Q ss_pred CCCCceeeEe-----cCCCceEEEEEec--CCeeeEEEEEecCCCCcCCCcceeccCHHHHHHHHHHHhhcccHHHHHHh
Q 014324 214 PDLGKCLYFD-----LASGTHSVFYELL--NKRLNWVWYINQPEPIMKGNSVTMRVSNDMIKNMHEEAEKVWLPEFVKVI 286 (426)
Q Consensus 214 ~~~~~~~~~~-----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (426)
...+...+.. ....+..+++|.+ ++..++.+....+.... ...+.+.++++ .. .|.+.+++
T Consensus 253 ~~~~~~~~~~g~~~~~~~~gg~~~~~~~~~~~~~~vg~~~~~~~~~~------~~~~~~~l~~~----~~--~p~i~~~l 320 (584)
T 2gmh_A 253 WKPGRVDHTVGWPLDRHTYGGSFLYHLNEGEPLLALGFVVGLDYQNP------YLSPFREFQRW----KH--HPSIKPTL 320 (584)
T ss_dssp CCTTEEEEEEETTSCTTSCEEEEEEECCSSSCEEEEEEEEETTCCCT------TCCHHHHHHHH----TT--STTTHHHH
T ss_pred ccCCeEEEEEeccccCCcCCceEEEEecCCCCeEEEEEEEecCcccc------cCChHHHHHHH----Hh--ChHHHHHh
Confidence 0011111111 0112345677887 67788877765433210 00122223222 11 34566666
Q ss_pred hhcCcce-E-eeee--ccCCCCccccccEEEeccccccCCCCCcchhhhhHHHHHHHHHHHHhhcc-c--cHHHH---HH
Q 014324 287 KETKEPF-I-NAMY--DCDPLKQIFWSNVVLIGDAAHPTTPHGLRSTNMSILDAMVLGKSLEKWGV-E--GLLSA---LE 356 (426)
Q Consensus 287 ~~~~~~~-~-~~~~--~~~p~~~~~~~rv~LvGDAAh~~~P~~G~G~~~ai~Da~~La~~L~~~~~-~--~~~~~---L~ 356 (426)
+...... . ..+. ...++++|..+|++|||||||.++|+.|||+|+||+||.+||++|..... . ..+++ |+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g~~~~~~a~~~L~ 400 (584)
T 2gmh_A 321 EGGKRIAYGARALNEGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENLQSKTIGLHVT 400 (584)
T ss_dssp TTCEEEEEEEEEEECCGGGGCCCCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCCCCSSSSCCCT
T ss_pred CCCeEEEecceEccCCCcccCCccccCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcCCcchhhhhhhHH
Confidence 4322111 0 0111 13346778889999999999999999999999999999999999987632 2 23453 89
Q ss_pred HHHHhhhhh-HHHHHHHHHHhhhhhh
Q 014324 357 EYQTVRLPV-TSKQVLHSRRLGRIKQ 381 (426)
Q Consensus 357 ~Y~~~R~~~-~~~~~~~~~~~~~~~~ 381 (426)
.|+++|+++ +.+.+..++.+..+++
T Consensus 401 ~Ye~~r~~~~v~~~l~~~r~~~~~~~ 426 (584)
T 2gmh_A 401 EYEDNLKNSWVWKELYSVRNIRPSCH 426 (584)
T ss_dssp HHHHHHHTSHHHHHHHHTTTTTGGGG
T ss_pred HHHHHHHHhHHHHHHHHHhChhHHHH
Confidence 999999998 5777777777766664
No 25
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.97 E-value=1.8e-29 Score=252.34 Aligned_cols=324 Identities=11% Similarity=-0.003 Sum_probs=194.0
Q ss_pred CCCccEEEEcCChHHHHHHHHHHH---cCCcEEEEcccCCCCCCCCCcceeccChhHHH-HHHHHhcCCchhhhccCcce
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLR---AGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQR-IIQSWLNGRPHLLHLATVPL 79 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~---~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~-~l~~~~~~~~~~~~~~~~~~ 79 (426)
+..+||+|||||++|+++|+.|++ .|++|+|||+...+. .+.|..+.+.+.+ +++.+|+...+.+.......
T Consensus 3 ~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~----~~~g~~~~~~~~~~~l~~lG~~~~~~~~~~~~~~ 78 (538)
T 2aqj_A 3 KPIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPR----IGVGEATIPSLQKVFFDFLGIPEREWMPQVNGAF 78 (538)
T ss_dssp CBCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCC----CCSCEECCTHHHHHTHHHHTCCHHHHGGGGTCEE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCC----cCCCcccchhHHHHHHHHhCCCHHHHHHhcCchh
Confidence 356899999999999999999999 999999999976543 3346778899999 99999884111133322221
Q ss_pred e--eccccc--------------cccc-------ccccc-c-c-----c-c-------------------------CCCc
Q 014324 80 T--IDQNQA--------------TDNA-------KVTRT-L-A-----R-D-------------------------DNFN 103 (426)
Q Consensus 80 ~--~~~~~~--------------~~~~-------~~~~~-~-~-----~-~-------------------------~~~~ 103 (426)
. ..+..+ ..+. .+... . . . . ....
T Consensus 79 ~~g~~~~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 158 (538)
T 2aqj_A 79 KAAIKFVNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTRQMSH 158 (538)
T ss_dssp ECEEEEESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCBCSCC
T ss_pred hCCccccCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCcCCCc
Confidence 1 000000 0000 00000 0 0 0 0 0112
Q ss_pred chhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEEeccCCchhhhhhhcCCC
Q 014324 104 FRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLVAADGCLSSIRQSFLSDF 181 (426)
Q Consensus 104 ~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI~AdG~~S~vR~~l~~~~ 181 (426)
.+.++|..+.+.|.+.+. .|+ ++++ +|+++..++++..+.|+ +.+|++ ++||+||+|||.+|.+|+.+++..
T Consensus 159 ~~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~---~~~g~~--i~ad~vV~A~G~~s~~~~~~lg~~ 232 (538)
T 2aqj_A 159 AWHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLL---TKEGRT--LEADLFIDCSGMRGLLINQALKEP 232 (538)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEE---ETTSCE--ECCSEEEECCGGGCCCCCCCTCCC
T ss_pred cEEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEE---ECCCcE--EEeCEEEECCCCchhhHHHHhCCC
Confidence 356889999999988775 478 8888 89999875444345555 567754 899999999999999976553221
Q ss_pred cccccc----eEEEEEEeeCCCCCchHHHhhhhcccCCCCceeeEecCCCceEEEEEecCCeeeEEEEEecCCCCcCCCc
Q 014324 182 KLRYSG----YCAWRGVLDFSGIEDSEIIKGMRRVYPDLGKCLYFDLASGTHSVFYELLNKRLNWVWYINQPEPIMKGNS 257 (426)
Q Consensus 182 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (426)
...+.. ...+...++... +. ..... .......+.++.+++|.++. ..+.+.+....
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~----~~-----~~~~~---~~~~~~~~~g~~~~~p~~~~-~~~g~v~~~~~------- 292 (538)
T 2aqj_A 233 FIDMSDYLLCDSAVASAVPNDD----AR-----DGVEP---YTSSIAMNSGWTWKIPMLGR-FGSGYVFSSHF------- 292 (538)
T ss_dssp EEECTTTCCCCEEEEEEEECCH----HH-----HCCCS---SEEEEECSSEEEEEEEETTE-EEEEEEECTTT-------
T ss_pred ccccccccccceEEEEecccCC----cc-----cCCCC---ceeeeecCCceEEEecCCCc-eEEEEEEcCCC-------
Confidence 111111 112211122110 00 00011 11123456778899998774 33333332110
Q ss_pred ceeccCHHHHHHHHHHHhhcccHHHHHHhhhcCcceEeeeeccCCCCccccccEEEeccccccCCCCCcchhhhhHHHHH
Q 014324 258 VTMRVSNDMIKNMHEEAEKVWLPEFVKVIKETKEPFINAMYDCDPLKQIFWSNVVLIGDAAHPTTPHGLRSTNMSILDAM 337 (426)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~rv~LvGDAAh~~~P~~G~G~~~ai~Da~ 337 (426)
.+.+...+.+...... .+ + .....+... ....+++..+|++|||||||.++|+.|||+|+|++||.
T Consensus 293 ----~~~~~~~~~l~~~~~~-~~-~-------~~~~~~~~~-~~~~~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~ 358 (538)
T 2aqj_A 293 ----TSRDQATADFLKLWGL-SD-N-------QPLNQIKFR-VGRNKRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALY 358 (538)
T ss_dssp ----SCHHHHHHHHHHHHTC-CT-T-------CCCEEEECC-CEEESCSEETTEEECGGGTEECCGGGSCHHHHHHHHHH
T ss_pred ----CChHHHHHHHHHHhcC-CC-C-------CCceEEeec-cccccccccCCEEEEcccccccCcchhccHHHHHHHHH
Confidence 0222222222222221 11 0 111112211 11234567799999999999999999999999999999
Q ss_pred HHHHHHHhhccccHHHHHHHHHHhhhhhHHHHHHHH
Q 014324 338 VLGKSLEKWGVEGLLSALEEYQTVRLPVTSKQVLHS 373 (426)
Q Consensus 338 ~La~~L~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~~ 373 (426)
.|++.|... ...+.+|+.|+++|+++...+.+..
T Consensus 359 ~La~~L~~~--~~~~~~l~~Y~~~~~~~~~~~~~~~ 392 (538)
T 2aqj_A 359 QLVKHFPDT--SFDPRLSDAFNAEIVHMFDDCRDFV 392 (538)
T ss_dssp HHHHTCCBT--TCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998742 4567899999999999887766543
No 26
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.97 E-value=3e-29 Score=249.63 Aligned_cols=323 Identities=13% Similarity=-0.027 Sum_probs=190.5
Q ss_pred ccEEEEcCChHHHHHHHHHHH---cCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeec-
Q 014324 7 GKAVIVGGSIAGISCAHALLR---AGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTID- 82 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~---~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~- 82 (426)
+||+|||||++|+++|+.|++ +|++|+|||+...+. .+.|..+.|...++++.+|+...+.+..........
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~~~----~~~g~~~~~~~~~~l~~lgi~~~~~~~~~~~~~~~~~ 78 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNVRR----IGVGEATFSTVRHFFDYLGLDEREWLPRCAGGYKLGI 78 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC-----------CCEECCTTHHHHHHHHTCCHHHHHHHTTCEEECEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCCCc----eeeccccCcchHHHHHHcCCCHHHHHHHcCCeEeccc
Confidence 699999999999999999999 999999999986542 345677889999999999984111143333221100
Q ss_pred -cccc---------ccc-------ccc------------c----------------------cccc----c---------
Q 014324 83 -QNQA---------TDN-------AKV------------T----------------------RTLA----R--------- 98 (426)
Q Consensus 83 -~~~~---------~~~-------~~~------------~----------------------~~~~----~--------- 98 (426)
+..+ ..+ ..+ . .... .
T Consensus 79 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 158 (511)
T 2weu_A 79 RFENWSEPGEYFYHPFERLRVVDGFNMAEWWLAVGDRRTSFSEACYLTHRLCEAKRAPRMLDGSLFASQVDESLGRSTLA 158 (511)
T ss_dssp EEESSSSTTCEEEEESCCCCEETTEEHHHHHHHHC----CHHHHHCHHHHHHHTTBCSBCTTSCBCC------CCSCCGG
T ss_pred eecCCCCCCCceEcCCCCCCCCCCCchHHHHHhccccccCcccccccccCHHHhhhhHHhHhcCCccccccccccccccc
Confidence 0000 000 000 0 0000 0
Q ss_pred -cC--CCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEEeccCCchhh
Q 014324 99 -DD--NFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLVAADGCLSSI 173 (426)
Q Consensus 99 -~~--~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI~AdG~~S~v 173 (426)
.. ....+.++|..+.+.|.+.+. .|+ ++++ +|++++.++++..+.|+ +.+|++ ++||+||+|||.+|.+
T Consensus 159 ~~~~~~~~~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~---~~~g~~--~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 159 EQRAQFPYAYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVH---TKQHGE--ISGDLFVDCTGFRGLL 232 (511)
T ss_dssp GCCSCCSCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEE---ESSSCE--EECSEEEECCGGGCCC
T ss_pred cCcCCCCeeEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEE---ECCCCE--EEcCEEEECCCcchHH
Confidence 00 112356889999999988765 488 8889 99999875444345555 566754 8999999999999999
Q ss_pred hhhhcC-CCc---ccccceEEEEEEeeCCCCCchHHHhhhhcccCCCCceeeEecCCCceEEEEEecCCeeeEEEEEecC
Q 014324 174 RQSFLS-DFK---LRYSGYCAWRGVLDFSGIEDSEIIKGMRRVYPDLGKCLYFDLASGTHSVFYELLNKRLNWVWYINQP 249 (426)
Q Consensus 174 R~~l~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (426)
|+.+.+ ... ........+...+..... +. .+ . .......+.++.+++|.++ ...+.+.....
T Consensus 233 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------~~--~-~~~~~~~~~g~~~~~P~~~-~~~~g~~~~~~ 298 (511)
T 2weu_A 233 INQTLGGRFQSFSDVLPNNRAVALRVPREND---ED-------MR--P-YTTATAMSAGWMWTIPLFK-RDGNGYVYSDE 298 (511)
T ss_dssp CCCCTCCCEEECTTTCCCCEEEEEEEECSSG---GG-------CC--S-SEEEEEETTEEEEEEECSS-EEEEEEEECTT
T ss_pred HHHHhCCCCccccccCcccceEEEEeccCCC---CC-------CC--c-ceeceecCCCcEEEEECCC-ceEEEEEECCC
Confidence 665432 111 001111112112222110 00 01 1 1123345667888999876 44444333211
Q ss_pred CCCcCCCcceeccCHHHHHHHHHHHhhcccHHHHHHhhhcCcceEeeeeccCCCCccccccEEEeccccccCCCCCcchh
Q 014324 250 EPIMKGNSVTMRVSNDMIKNMHEEAEKVWLPEFVKVIKETKEPFINAMYDCDPLKQIFWSNVVLIGDAAHPTTPHGLRST 329 (426)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~rv~LvGDAAh~~~P~~G~G~ 329 (426)
. .+.+...+.+.... .+.+.+ ......... ....+++..+|++|||||||.++|+.|+|+
T Consensus 299 ~-----------~~~~~~~~~l~~~~-~~~~~~-------~~~~~~~~~-~~~~~~~~~~rv~liGDAAh~~~P~~g~G~ 358 (511)
T 2weu_A 299 F-----------ISPEEAERELRSTV-APGRDD-------LEANHIQMR-IGRNERTWINNCVAVGLSAAFVEPLESTGI 358 (511)
T ss_dssp T-----------SCHHHHHHHHHHHH-CTTCTT-------SCCEEEECC-CEEESCSEETTEEECGGGTEECCGGGCCHH
T ss_pred C-----------CCHHHHHHHHHHHh-Cccccc-------ccceeEEee-ccccccccCCCEEEEechhhccCccccccH
Confidence 0 12222222222111 111111 111111111 112344567999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHhhccccHHHHHHHHHHhhhhhHHHHHHHHHH
Q 014324 330 NMSILDAMVLGKSLEKWGVEGLLSALEEYQTVRLPVTSKQVLHSRR 375 (426)
Q Consensus 330 ~~ai~Da~~La~~L~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~~~~ 375 (426)
|+|++||..|+++|... ...+.+|+.|+++|+++...+.+....
T Consensus 359 ~~a~~da~~La~~l~~~--~~~~~~l~~Y~~~~~~~~~~~~~~~~~ 402 (511)
T 2weu_A 359 FFIQHAIEQLVKHFPGE--RWDPVLISAYNERMAHMVDGVKEFLVL 402 (511)
T ss_dssp HHHHHHHHHHHHTCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999752 456789999999999988877665443
No 27
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.97 E-value=3e-29 Score=251.14 Aligned_cols=329 Identities=12% Similarity=0.002 Sum_probs=195.7
Q ss_pred CCccEEEEcCChHHHHHHHHHHH---cCCcEEEEcccCCCCCCCCCcceeccChhHHH-HHHHHhcCCchhhhccCccee
Q 014324 5 EKGKAVIVGGSIAGISCAHALLR---AGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQR-IIQSWLNGRPHLLHLATVPLT 80 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~---~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~-~l~~~~~~~~~~~~~~~~~~~ 80 (426)
..+||+||||||+|+++|+.|++ .|++|+|||+...+. .+.|..+.|.+.+ +++.+|+...+.+........
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~----~~~g~~~~p~~~~~~l~~lGi~~~~~~~~~~~~~~ 99 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIPT----LGVGEATIPNLQTAFFDFLGIPEDEWMRECNASYK 99 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCCCC----CCCCEECCTHHHHHTHHHHTCCHHHHHHHTTCEEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCCCc----cceeeeechhHHHHHHHHhCCChHHHHHhcCCeEE
Confidence 46899999999999999999999 999999999976543 3456788899999 999999841111443322111
Q ss_pred --ecccccc-c-------------cc----ccc-----------------------c-----c------cc-c-------
Q 014324 81 --IDQNQAT-D-------------NA----KVT-----------------------R-----T------LA-R------- 98 (426)
Q Consensus 81 --~~~~~~~-~-------------~~----~~~-----------------------~-----~------~~-~------- 98 (426)
..+..+. . +. .++ . . .. .
T Consensus 100 ~g~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (550)
T 2e4g_A 100 VAIKFINWRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRSPRRL 179 (550)
T ss_dssp CEEEEESSSSCCCCCSSCCEETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBCSBCT
T ss_pred EeeeEeecccccccccccccccCCCCeeEecCCccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhhhHhh
Confidence 0000000 0 00 000 0 0 00 0
Q ss_pred c---CCCcchhccHHHHHHHHHhcCC-C-Ce-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEEeccCCchh
Q 014324 99 D---DNFNFRAAHWADLHGLLYNALP-P-EI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLVAADGCLSS 172 (426)
Q Consensus 99 ~---~~~~~~~~~r~~l~~~L~~~~~-~-~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI~AdG~~S~ 172 (426)
. .....+.+++..+.+.|.+.+. . |+ ++++ +|+++..++++..+.|+ +.+|++ ++||+||+|||.+|.
T Consensus 180 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~---~~~G~~--i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 180 DGSKVTNYAWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVR---TATGRV--FDADLFVDCSGFRGL 253 (550)
T ss_dssp TSCBCSCCEEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEE---ETTSCE--EECSEEEECCGGGCC
T ss_pred cCCCCCCcceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEE---ECCCCE--EECCEEEECCCCchh
Confidence 0 0111245889999999988775 4 78 8999 99999875444345555 566754 899999999999999
Q ss_pred hhhhhcCCCcccccc----eEEEEEEeeCCCCCchHHHhhhhcccCCCCceeeEecCCCceEEEEEecCCeeeEEEEEec
Q 014324 173 IRQSFLSDFKLRYSG----YCAWRGVLDFSGIEDSEIIKGMRRVYPDLGKCLYFDLASGTHSVFYELLNKRLNWVWYINQ 248 (426)
Q Consensus 173 vR~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (426)
+++..++.....+.+ .......+.... +. ...+ .. ......+.++.+++|+++ ...+.+.+..
T Consensus 254 ~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~----~~-----~~~~--~~-~~~~~~~~g~~~~ipl~~-~~~~g~v~~~ 320 (550)
T 2e4g_A 254 LINKAMEEPFLDMSDHLLNDSAVATQVPHDD----DA-----NGVE--PF-TSAIAMKSGWTWKIPMLG-RFGTGYVYSS 320 (550)
T ss_dssp CCCCCTCCCEEECTTTCCCCEEEEEEEECCH----HH-----HCCC--SS-EEEEECSSEEEEEEECSS-EEEEEEEECT
T ss_pred hHHHHhCCCcccccccccccceEEEeecccC----Cc-----ccCC--Cc-eeeeecCCceEEEccCCC-ccceEEEEec
Confidence 954433211111111 011111111110 00 0001 11 112234677888888876 3333333321
Q ss_pred CCCCcCCCcceeccCHHHHHHHHHHHhhcccHHHHHHhhhcCcceEeeeeccCCCCccccccEEEeccccccCCCCCcch
Q 014324 249 PEPIMKGNSVTMRVSNDMIKNMHEEAEKVWLPEFVKVIKETKEPFINAMYDCDPLKQIFWSNVVLIGDAAHPTTPHGLRS 328 (426)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~rv~LvGDAAh~~~P~~G~G 328 (426)
.. .+.+...+.+....... +.+ ...... .+.....+++..+|++|||||||.++|+.|||
T Consensus 321 ~~-----------~~~~~~~~~l~~~~~~~-p~l-------~~~~~i-~~~~~~~~~~~~~rvvliGDAAh~~~P~~GqG 380 (550)
T 2e4g_A 321 RF-----------ATEDEAVREFCEMWHLD-PET-------QPLNRI-RFRVGRNRRAWVGNCVSIGTSSCFVEPLESTG 380 (550)
T ss_dssp TT-----------SCHHHHHHHHHHHTTCC-TTT-------SCCEEE-ECCCEEESCSEETTEEECSTTTEECCGGGSCH
T ss_pred CC-----------CChHHHHHHHHHhhCcC-ccc-------CCCceE-EecCCCccccccCCEEEEehhhcccCccchhh
Confidence 10 12222222222222211 111 111111 11122234456799999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHhhccccHHHHHHHHHHhhhhhHHHHHHHHHHhhh
Q 014324 329 TNMSILDAMVLGKSLEKWGVEGLLSALEEYQTVRLPVTSKQVLHSRRLGR 378 (426)
Q Consensus 329 ~~~ai~Da~~La~~L~~~~~~~~~~~L~~Y~~~R~~~~~~~~~~~~~~~~ 378 (426)
+|+|++||..|+++|... ...+.+|+.|+++|++++..+.+.......
T Consensus 381 i~~a~~da~~La~~L~~~--~~~~~~l~~Y~~~~~~~~~~i~~~~~~~y~ 428 (550)
T 2e4g_A 381 IYFVYAALYQLVKHFPDK--SLNPVLTARFNREIETMFDDTRDFIQAHFY 428 (550)
T ss_dssp HHHHHHHHHHHHHTCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998742 456789999999999999887776655443
No 28
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.96 E-value=1.6e-28 Score=238.57 Aligned_cols=326 Identities=13% Similarity=-0.006 Sum_probs=181.9
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCC-CCCcceeccChhHHHHHHHHhcCCchhhhccCcceeeccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTG-SPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQN 84 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~-~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 84 (426)
++||+||||||+||++|+.|+++|++|+||||.+.+... .....+..+.+.++..++.+|+...... .........
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~~---~~~~~~~~~ 98 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVALDVNEWPSE---EFGYFGHYY 98 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHTTCCCSCHH---HHCEEEEEE
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccchhhhhhhhcChhhhhhh---cccccceeE
Confidence 369999999999999999999999999999998743211 1111123345667777777765311111 111100000
Q ss_pred cccccccccccccccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecE
Q 014324 85 QATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNL 162 (426)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~ 162 (426)
.......+.. ..........+.+..+...|.+.+. .|+ +++.. ++ ..+.+....++|+
T Consensus 99 ~~~~~~~~~~--~~~~~~~~~~v~~~~l~~~L~~~~~~~Gv~v~~~~-------------v~-----~~~l~~~~~~ad~ 158 (430)
T 3ihm_A 99 YVGGPQPMRF--YGDLKAPSRAVDYRLYQPMLMRALEARGGKFCYDA-------------VS-----AEDLEGLSEQYDL 158 (430)
T ss_dssp EECSSSCEEE--EEEEEEEEBEECHHHHHHHHHHHHHHTTCEEEECC-------------CC-----GGGHHHHHTTSSE
T ss_pred EECCCCcccc--chhcCCcceeecHHHHHHHHHHHHHHcCCEEEEEe-------------cc-----hhhhhhhcccCCE
Confidence 0001000000 0000123355778888888877665 465 44311 00 0111111126899
Q ss_pred EEeccCCchhhhhhhcCCCcccc------cceEEEEEEeeCCCCCchHHHhhhhcccCCCCceeeEecCCCceEEEEEec
Q 014324 163 LVAADGCLSSIRQSFLSDFKLRY------SGYCAWRGVLDFSGIEDSEIIKGMRRVYPDLGKCLYFDLASGTHSVFYELL 236 (426)
Q Consensus 163 vI~AdG~~S~vR~~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (426)
||+|||.+|.+|..........+ .....+.++.+ + ......+......+..+.+|..
T Consensus 159 VV~AdG~~S~~~~~~~~~~~~~~~~p~r~~~~~~~~g~~~-~----------------~~~~~~~~~~~~~G~~~~~p~~ 221 (430)
T 3ihm_A 159 LVVCTGKYALGKVFEKQSENSPFEKPQRALCVGLFKGIKE-A----------------PIRAVTMSFSPGHGELIEIPTL 221 (430)
T ss_dssp EEECCCCTTGGGGSCBCGGGCCCSSCSSEEEEEEEESBCC-C----------------SSCCEEEEEETTTEEEEEEEEE
T ss_pred EEECCCCcchHHhccCCCCCCcccCCCeeEEEEEEccCCC-C----------------CcCeeeeeecCCCcceEEeccc
Confidence 99999999999854321111111 11112222211 1 0011112222334556666653
Q ss_pred --CCeeeEEEEEecCCCCcCCCcceec---cCHHHHHHHHHHHhhcccHHHHHHhhhcC--c----c-e----Eeeeecc
Q 014324 237 --NKRLNWVWYINQPEPIMKGNSVTMR---VSNDMIKNMHEEAEKVWLPEFVKVIKETK--E----P-F----INAMYDC 300 (426)
Q Consensus 237 --~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~-~----~~~~~~~ 300 (426)
++..++.++...+.... ..+... .+.+...+.+.+....|.|.+.+++.... . . . .++. ..
T Consensus 222 ~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~ 298 (430)
T 3ihm_A 222 SFNGMSTALVLENHIGSDL--EVLAHTKYDDDPRAFLDLMLEKLGKHHPSVAERIDPAEFDLANSSLDILQGGVVPA-FR 298 (430)
T ss_dssp ETTEEEEEEEEEECTTSSS--GGGGTSCTTTCHHHHHHHHHHHHHHHCHHHHTTBCTTTCEESSSTTSEEEECCCCE-EB
T ss_pred CCCcceEEEEEEecCCCcH--HHhccccCCCCHHHHHHHHHHHHHHhCccHHHHHhhchhccccCccceeecceeec-cc
Confidence 23444444444433211 111111 13333333333345567788877765543 1 1 1 1121 14
Q ss_pred CCCCccccccEEE-eccccccCCCCCcchhhhhHHHHHHHHHHHHhhccccHHHHHHHHHHhhh-hhHHHHHHHHHHh
Q 014324 301 DPLKQIFWSNVVL-IGDAAHPTTPHGLRSTNMSILDAMVLGKSLEKWGVEGLLSALEEYQTVRL-PVTSKQVLHSRRL 376 (426)
Q Consensus 301 ~p~~~~~~~rv~L-vGDAAh~~~P~~G~G~~~ai~Da~~La~~L~~~~~~~~~~~L~~Y~~~R~-~~~~~~~~~~~~~ 376 (426)
.++++|..+|++| +|||||.++|+.|||+|+||+||.+|+++|.... +.+++|..|+.+|+ ++++...+.++.+
T Consensus 299 ~~~~~~~~~~~~ll~GDAah~~~p~~g~G~~~a~~da~~l~~~l~~~~--~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 374 (430)
T 3ihm_A 299 DGHATLNNGKTIIGLGDIQATVDPVLGQGANMASYAAWILGEEILAHS--VYDLRFSEHLERRRQDRVLCATRWTNFT 374 (430)
T ss_dssp CSEEECTTSCEEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHCS--CCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCEEEEecCccccCCCchhhhHHHHHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667788899998 9999999999999999999999999999999863 47889999999998 6666666555544
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.90 E-value=5.4e-23 Score=202.89 Aligned_cols=142 Identities=14% Similarity=0.054 Sum_probs=102.8
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeeccc
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQN 84 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 84 (426)
..+||+||||||+||++|+.|+++|++|+|||+.+.++. .....+.+.+++.++.+|. .+....
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~----~~~~~~~~~~~~~l~~~g~--~~~~~~---------- 154 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSR----HNVLHLWPFTIHDLRALGA--KKFYGR---------- 154 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCC----CCEEECCHHHHHHHHTTTH--HHHCTT----------
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCC----CCcccCChhHHHHHHHcCC--cccccc----------
Confidence 458999999999999999999999999999999987642 2456678888888887765 211100
Q ss_pred cccccccccccccccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEec-CCceEEEEEEecc-CCceEEEee
Q 014324 85 QATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISE-VKTTVTVKAKVLQ-TDEVIEIKG 160 (426)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~-~~~~v~v~~~~~~-~g~~~~~~~ 160 (426)
+.. ..+..+++..+.+.|.+.+. .++ ++++++|++++.++ ++..+.|+++ .. +|+..++++
T Consensus 155 -~~~-------------~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~-~~~~g~~~~i~a 219 (497)
T 2bry_A 155 -FCT-------------GTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQ-PNPPAQLASYEF 219 (497)
T ss_dssp -TTC-------------TTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEE-SCCCHHHHTCCB
T ss_pred -ccc-------------cccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEE-ECCCCCEEEEEc
Confidence 000 01223567888888887665 478 99999999998642 2334555532 13 563334899
Q ss_pred cEEEeccCCchhhhhhh
Q 014324 161 NLLVAADGCLSSIRQSF 177 (426)
Q Consensus 161 d~vI~AdG~~S~vR~~l 177 (426)
|+||+|||.+|.+|+..
T Consensus 220 d~VV~A~G~~S~~r~~~ 236 (497)
T 2bry_A 220 DVLISAAGGKFVPEGFT 236 (497)
T ss_dssp SEEEECCCTTCCCTTCE
T ss_pred CEEEECCCCCccccccc
Confidence 99999999999999765
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.76 E-value=1.7e-16 Score=148.83 Aligned_cols=151 Identities=16% Similarity=0.133 Sum_probs=85.3
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCC----------Ccc--eeccChhHHHHHHHHhcCCchhhhc
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSP----------TGA--GLGLDRPAQRIIQSWLNGRPHLLHL 74 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~----------~~~--~~~l~~~~~~~l~~~~~~~~~~~~~ 74 (426)
+||+|||||++|+++|+.|+++|++|+||||.+.++.... .+. .....+...+.++.+.. ......
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 80 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQA--QGHVAE 80 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHH--HTSEEE
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHh--CCCeee
Confidence 6999999999999999999999999999999987642110 000 00112334444554432 111111
Q ss_pred cCcceeeccccccccccccccccccCCCcch-hccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccC
Q 014324 75 ATVPLTIDQNQATDNAKVTRTLARDDNFNFR-AAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQT 152 (426)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~ 152 (426)
..... .....+. +.... .....+. ......+.+.|.+ ++ |+++++|++++.+++ .|+|+ +.+
T Consensus 81 ~~~~~----~~~~~~~-~~~~~--~~~~~~~~~~~~~~l~~~l~~----g~~i~~~~~v~~i~~~~~--~~~v~---~~~ 144 (336)
T 1yvv_A 81 WTPLL----YNFHAGR-LSPSP--DEQVRWVGKPGMSAITRAMRG----DMPVSFSCRITEVFRGEE--HWNLL---DAE 144 (336)
T ss_dssp ECCCE----EEESSSB-CCCCC--TTSCEEEESSCTHHHHHHHHT----TCCEECSCCEEEEEECSS--CEEEE---ETT
T ss_pred ccccc----eeccCcc-cccCC--CCCccEEcCccHHHHHHHHHc----cCcEEecCEEEEEEEeCC--EEEEE---eCC
Confidence 11000 0000110 00000 0000000 0111334444443 66 999999999986543 56666 567
Q ss_pred CceEEEeecEEEeccCCchhhhhh
Q 014324 153 DEVIEIKGNLLVAADGCLSSIRQS 176 (426)
Q Consensus 153 g~~~~~~~d~vI~AdG~~S~vR~~ 176 (426)
|+. ..++|+||+|+|.+|.+|..
T Consensus 145 g~~-~~~a~~vV~a~g~~~~~~~~ 167 (336)
T 1yvv_A 145 GQN-HGPFSHVIIATPAPQASTLL 167 (336)
T ss_dssp SCE-EEEESEEEECSCHHHHGGGG
T ss_pred CcC-ccccCEEEEcCCHHHHHHhh
Confidence 764 23599999999999999865
No 31
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.59 E-value=3.7e-14 Score=136.46 Aligned_cols=211 Identities=10% Similarity=0.009 Sum_probs=105.0
Q ss_pred cHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEEeccCCch-hhhhhhcCCCccc
Q 014324 108 HWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLVAADGCLS-SIRQSFLSDFKLR 184 (426)
Q Consensus 108 ~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI~AdG~~S-~vR~~l~~~~~~~ 184 (426)
+-..+.+.|.+.+. .|+ ++++++|+++..++ +..+.|+ ..+| ++++|.||.|+|.+| .+++.+....+..
T Consensus 172 ~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~-~~~~~v~---~~~g---~~~a~~vV~a~G~~s~~l~~~~g~~~~~~ 244 (405)
T 2gag_B 172 KHDHVAWAFARKANEMGVDIIQNCEVTGFIKDG-EKVTGVK---TTRG---TIHAGKVALAGAGHSSVLAEMAGFELPIQ 244 (405)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-SBEEEEE---ETTC---CEEEEEEEECCGGGHHHHHHHHTCCCCEE
T ss_pred CHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeC-CEEEEEE---eCCc---eEECCEEEECCchhHHHHHHHcCCCCCcc
Confidence 34456666666554 478 99999999998643 3334454 4566 389999999999998 6777664333222
Q ss_pred -ccceEEEEEEeeCCCCCchHHHhhhhcccCCCCceeeEecCCCceEEEEEecCCeeeEEEEEecCCCCcCCCcceeccC
Q 014324 185 -YSGYCAWRGVLDFSGIEDSEIIKGMRRVYPDLGKCLYFDLASGTHSVFYELLNKRLNWVWYINQPEPIMKGNSVTMRVS 263 (426)
Q Consensus 185 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (426)
+.+... ..+ +.. +... ... ...+...++.|.+++.+.+.......... ....+
T Consensus 245 ~~~~~~~---~~~--~~~------------~~~~-~~~--~~~~~~~y~~p~~~g~~~ig~~~~~~~~~------~~~~~ 298 (405)
T 2gag_B 245 SHPLQAL---VSE--LFE------------PVHP-TVV--MSNHIHVYVSQAHKGELVMGAGIDSYNGY------GQRGA 298 (405)
T ss_dssp EEEEEEE---EEE--EBC------------SCCC-SEE--EETTTTEEEEECTTSEEEEEEEECSSCCC------SSCCC
T ss_pred ccceeEE---Eec--CCc------------cccC-ceE--EeCCCcEEEEEcCCCcEEEEeccCCCCcc------ccCCC
Confidence 111111 111 000 0000 111 12233455566666655554433211100 11122
Q ss_pred HHHHHHHHHHHhhcccHHHHHHhhhcCcceEeeeeccCCCCccccccEEEecccc----ccCCCCCcchhhhhHHHHHHH
Q 014324 264 NDMIKNMHEEAEKVWLPEFVKVIKETKEPFINAMYDCDPLKQIFWSNVVLIGDAA----HPTTPHGLRSTNMSILDAMVL 339 (426)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~rv~LvGDAA----h~~~P~~G~G~~~ai~Da~~L 339 (426)
.+..+.+.+...+ ..|.+ ........|.- ..| ...++..++|++. +...-+.|.|+..|..-|..|
T Consensus 299 ~~~~~~l~~~~~~-~~p~l----~~~~~~~~w~g--~~~---~t~d~~p~ig~~~~~~l~~~~G~~g~G~~~a~~~g~~l 368 (405)
T 2gag_B 299 FHVIQEQMAAAVE-LFPIF----ARAHVLRTWGG--IVD---TTMDASPIISKTPIQNLYVNCGWGTGGFKGTPGAGFTL 368 (405)
T ss_dssp THHHHHHHHHHHH-HCGGG----GGCEECEEEEE--EEE---EETTSCCEEEECSSBTEEEEECCGGGCSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHH-hCCcc----ccCCcceEEee--ccc---cCCCCCCEecccCCCCEEEEecCCCchhhHHHHHHHHH
Confidence 3334444332111 11211 11111112221 111 3447788899864 222345667888888888888
Q ss_pred HHHHHhhccccHHHHHHHHHHhhhh
Q 014324 340 GKSLEKWGVEGLLSALEEYQTVRLP 364 (426)
Q Consensus 340 a~~L~~~~~~~~~~~L~~Y~~~R~~ 364 (426)
++.|...... ..+..|.-+|.+
T Consensus 369 a~~i~g~~~~---~~~~~~~~~R~~ 390 (405)
T 2gag_B 369 AHTIANDEPH---ELNKPFSLERFE 390 (405)
T ss_dssp HHHHHHTSCC---TTTTTSCSTHHH
T ss_pred HHHHhCCCCC---ccccccCcchhc
Confidence 8877654211 235667666643
No 32
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.57 E-value=5.8e-14 Score=133.98 Aligned_cols=208 Identities=12% Similarity=0.019 Sum_probs=107.3
Q ss_pred hccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEEeccCCchh-hhhhhcCCCc
Q 014324 106 AAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLVAADGCLSS-IRQSFLSDFK 182 (426)
Q Consensus 106 ~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI~AdG~~S~-vR~~l~~~~~ 182 (426)
.++...+.+.|.+.+. .|+ ++++++|++++.++ ..+.|+ ..+| +++||.||.|+|.+|. +.+.+....+
T Consensus 160 ~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~--~~~~v~---~~~g---~~~a~~vV~A~G~~s~~l~~~~~~~~~ 231 (382)
T 1ryi_A 160 HVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDG--EALFIK---TPSG---DVWANHVVVASGVWSGMFFKQLGLNNA 231 (382)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSS--SSEEEE---ETTE---EEEEEEEEECCGGGTHHHHHHTTCCCC
T ss_pred EEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEEC--CEEEEE---cCCc---eEEcCEEEECCChhHHHHHHhcCCCCc
Confidence 3555677777777654 477 99999999998543 345554 4455 3899999999999986 7666532222
Q ss_pred cc-ccceEEEEEEeeCCCCCchHHHhhhhcccCCCCceeeEecCCCceEEEEEecCCeeeEEEEEecCCCCcCCCcceec
Q 014324 183 LR-YSGYCAWRGVLDFSGIEDSEIIKGMRRVYPDLGKCLYFDLASGTHSVFYELLNKRLNWVWYINQPEPIMKGNSVTMR 261 (426)
Q Consensus 183 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (426)
.. ..++.. .++.... ... .. ++ .+ ..+++|.+++...+........ ....
T Consensus 232 ~~~~~g~~~---~~~~~~~--------------~~~-~~-~~-~~--~~~~~p~~~g~~~vG~~~~~~~-------~~~~ 282 (382)
T 1ryi_A 232 FLPVKGECL---SVWNDDI--------------PLT-KT-LY-HD--HCYIVPRKSGRLVVGATMKPGD-------WSET 282 (382)
T ss_dssp CEEEEEEEE---EEECCSS--------------CCC-SE-EE-ET--TEEEEECTTSEEEEECCCEETC-------CCCS
T ss_pred eeccceEEE---EECCCCC--------------Ccc-ce-EE-cC--CEEEEEcCCCeEEEeecccccC-------CCCC
Confidence 11 111111 1111100 000 11 11 11 3456666555444332211110 0112
Q ss_pred cCHHHHHHHHHHHhhcccHHHHHHhhhcCcceEeeeeccCCCCccccccEEEecccc-----ccCCCCCcchhhhhHHHH
Q 014324 262 VSNDMIKNMHEEAEKVWLPEFVKVIKETKEPFINAMYDCDPLKQIFWSNVVLIGDAA-----HPTTPHGLRSTNMSILDA 336 (426)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~rv~LvGDAA-----h~~~P~~G~G~~~ai~Da 336 (426)
.+.+..+.+++...+ +.|.+. .......|.- ..| +..++..++|++. +...+++|.|+..|...|
T Consensus 283 ~~~~~~~~l~~~~~~-~~p~l~----~~~~~~~w~g--~~~---~t~d~~p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g 352 (382)
T 1ryi_A 283 PDLGGLESVMKKAKT-MLPAIQ----NMKVDRFWAG--LRP---GTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATG 352 (382)
T ss_dssp CCHHHHHHHHHHHHH-HCGGGG----GSEEEEEEEE--EEE---ECSSSCCEEEEETTEEEEEEEECCSSCTTTTHHHHH
T ss_pred CCHHHHHHHHHHHHH-hCCCcC----CCceeeEEEE--ecc---cCCCCCcEeccCCCcCCEEEEEcCCcchHHHhHHHH
Confidence 233444444332221 112111 1111112211 111 2346677788763 446778999999999999
Q ss_pred HHHHHHHHhhccccHHHHH-HHHHHhhh
Q 014324 337 MVLGKSLEKWGVEGLLSAL-EEYQTVRL 363 (426)
Q Consensus 337 ~~La~~L~~~~~~~~~~~L-~~Y~~~R~ 363 (426)
..|++.|.... .. ..+ ..|.-.|.
T Consensus 353 ~~la~~i~~~~-~~--~~~~~~~~~~Rf 377 (382)
T 1ryi_A 353 ALISDLIMNKE-VN--QDWLHAFRIDRK 377 (382)
T ss_dssp HHHHHHHTTCC-CC--HHHHHHTCSCCC
T ss_pred HHHHHHHhCCC-CC--chhhcCCChhhc
Confidence 99999997643 11 123 66655553
No 33
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.52 E-value=4.5e-14 Score=128.42 Aligned_cols=36 Identities=39% Similarity=0.563 Sum_probs=34.5
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPP 42 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~ 42 (426)
+||+|||||||||+||+.|+++|++|+||||++.++
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~G 38 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSG 38 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 799999999999999999999999999999998874
No 34
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.50 E-value=2.7e-12 Score=126.73 Aligned_cols=68 Identities=16% Similarity=-0.039 Sum_probs=49.5
Q ss_pred ccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEEeccCCchh-hhhh
Q 014324 107 AHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLVAADGCLSS-IRQS 176 (426)
Q Consensus 107 ~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI~AdG~~S~-vR~~ 176 (426)
++...+...|.+.+. .|+ ++.+++|+++..++ ..+.|++++..+|+..+++||.||.|+|.+|. +++.
T Consensus 146 v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~ 216 (501)
T 2qcu_A 146 VDDARLVLANAQMVVRKGGEVLTRTRATSARREN--GLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDD 216 (501)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHH
T ss_pred EcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC--CEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHH
Confidence 456667777766554 588 99999999998754 34556544335677666999999999999986 5553
No 35
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.50 E-value=7.4e-13 Score=126.31 Aligned_cols=38 Identities=42% Similarity=0.657 Sum_probs=34.4
Q ss_pred CCCCCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 1 MEKKEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 1 m~~~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
||+ .++||+|||||++|+++|+.|+++|++|+|+|+..
T Consensus 1 Mm~-~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 1 MLP-EKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp -CC-SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCC-CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 664 46899999999999999999999999999999984
No 36
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.47 E-value=1.1e-12 Score=124.27 Aligned_cols=67 Identities=7% Similarity=0.044 Sum_probs=48.7
Q ss_pred ccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEEeccCCch-hhhhhh
Q 014324 107 AHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLVAADGCLS-SIRQSF 177 (426)
Q Consensus 107 ~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI~AdG~~S-~vR~~l 177 (426)
++...+.+.|.+.++ .|+ ++++++|++++.++++ .+.|+ ..+|+..+++||.||.|+|.+| .+.+.+
T Consensus 147 ~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~-~~~v~---~~~g~~~~~~a~~VV~A~G~~s~~l~~~~ 216 (369)
T 3dme_A 147 VDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEG-GFELD---FGGAEPMTLSCRVLINAAGLHAPGLARRI 216 (369)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTS-SEEEE---ECTTSCEEEEEEEEEECCGGGHHHHHHTE
T ss_pred ECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCc-eEEEE---ECCCceeEEEeCEEEECCCcchHHHHHHh
Confidence 445667777777655 478 9999999999975432 35555 5677655699999999999998 455554
No 37
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.46 E-value=2.6e-12 Score=131.64 Aligned_cols=59 Identities=15% Similarity=0.109 Sum_probs=44.8
Q ss_pred ccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEEeccCCchh
Q 014324 107 AHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLVAADGCLSS 172 (426)
Q Consensus 107 ~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI~AdG~~S~ 172 (426)
++...+.+.|.+.+. .|+ |+++++|+++..+++ .|.|+ ..+|.+ ++||.||.|+|.+|.
T Consensus 414 v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~--~v~V~---t~~G~~--i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 414 LCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDD--CWLLN---FAGDQQ--ATHSVVVLANGHQIS 474 (676)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETT--EEEEE---ETTSCE--EEESEEEECCGGGGG
T ss_pred eCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCC--eEEEE---ECCCCE--EECCEEEECCCcchh
Confidence 445666677776654 488 999999999997544 46665 556664 899999999999986
No 38
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.44 E-value=8.3e-12 Score=119.25 Aligned_cols=37 Identities=16% Similarity=0.358 Sum_probs=34.4
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPP 42 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~ 42 (426)
++||+|||||++|+++|+.|+++|++|+|+|+.....
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~ 39 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPH 39 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 4899999999999999999999999999999987654
No 39
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.44 E-value=2.1e-12 Score=122.93 Aligned_cols=63 Identities=17% Similarity=0.152 Sum_probs=46.2
Q ss_pred ccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEEeccCCchh-hhhhh
Q 014324 107 AHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLVAADGCLSS-IRQSF 177 (426)
Q Consensus 107 ~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI~AdG~~S~-vR~~l 177 (426)
++...+.+.|.+.+. .|+ ++++++|++++.+++ .+.|+ +.+| +++||.||.|+|.+|. +.+.+
T Consensus 151 ~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~--~~~V~---t~~g---~i~a~~VV~A~G~~s~~l~~~~ 216 (381)
T 3nyc_A 151 IDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDG--AWEVR---CDAG---SYRAAVLVNAAGAWCDAIAGLA 216 (381)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETT--EEEEE---CSSE---EEEESEEEECCGGGHHHHHHHH
T ss_pred ECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCC--eEEEE---eCCC---EEEcCEEEECCChhHHHHHHHh
Confidence 455666666766654 488 999999999987544 46665 5555 3899999999999984 55554
No 40
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.43 E-value=3.7e-12 Score=130.61 Aligned_cols=59 Identities=10% Similarity=0.013 Sum_probs=43.4
Q ss_pred ccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCc-eEEEeecEEEeccCCchh
Q 014324 107 AHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDE-VIEIKGNLLVAADGCLSS 172 (426)
Q Consensus 107 ~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~-~~~~~~d~vI~AdG~~S~ 172 (426)
++...+.+.|.+.+. .|+ |+++++|++++.+++ .|.|+ ..+|. . ++||.||.|+|.+|.
T Consensus 409 v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~--~v~V~---t~~G~~~--i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 409 LCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDS--QWQLT---FGQSQAA--KHHATVILATGHRLP 470 (689)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSS--SEEEE---EC-CCCC--EEESEEEECCGGGTT
T ss_pred ECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCC--eEEEE---eCCCcEE--EECCEEEECCCcchh
Confidence 344666666766654 488 999999999997544 36655 45664 4 899999999999976
No 41
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.43 E-value=1.3e-11 Score=123.37 Aligned_cols=71 Identities=23% Similarity=0.071 Sum_probs=51.0
Q ss_pred ccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEEeccCCch-hhhhhhc
Q 014324 107 AHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLVAADGCLS-SIRQSFL 178 (426)
Q Consensus 107 ~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI~AdG~~S-~vR~~l~ 178 (426)
++...+...|.+.+. .|+ ++.+++|+++..+++ ..+.|++.+..+|+..+++||.||.|+|.+| .+++.+.
T Consensus 167 vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g-~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g 240 (561)
T 3da1_A 167 TDDARLTLEIMKEAVARGAVALNYMKVESFIYDQG-KVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDR 240 (561)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEETT-EEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTT
T ss_pred EcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCC-eEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcC
Confidence 445566666666554 588 999999999987533 2234665555567767799999999999998 5777654
No 42
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.42 E-value=6.2e-14 Score=134.70 Aligned_cols=144 Identities=18% Similarity=0.217 Sum_probs=84.2
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCC-Ccce-ecc-----Ch---------hHHHHHHHHhcC
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSP-TGAG-LGL-----DR---------PAQRIIQSWLNG 67 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~-~~~~-~~l-----~~---------~~~~~l~~~~~~ 67 (426)
+.++||+|||||++|+++|+.|+++|++|+|+|+.+.++.... .|.+ ..+ .+ .....+.++...
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQ 104 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHH
Confidence 3568999999999999999999999999999999987642100 0000 000 00 011111111110
Q ss_pred C-chhhhccCcceeeccccccccccccccccccCCCcchhccHHHHHHHHHhcCCC-Ce-eEeeeeEEEEEEecCCceEE
Q 014324 68 R-PHLLHLATVPLTIDQNQATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPP-EI-FLRGHQYLSFCISEVKTTVT 144 (426)
Q Consensus 68 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~-~~-i~~~~~v~~~~~~~~~~~v~ 144 (426)
. .+.+...+.+.. .......+....+..+.+.|.+.+++ |+ ++++++|+++..+++ .+.
T Consensus 105 ~~~~~~~~~Gi~~~----------------~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~--~~~ 166 (417)
T 3v76_A 105 DFVALVERHGIGWH----------------EKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTAS--GFR 166 (417)
T ss_dssp HHHHHHHHTTCCEE----------------ECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETT--EEE
T ss_pred HHHHHHHHcCCCcE----------------EeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCC--EEE
Confidence 0 000011111100 00011112234556777778777654 88 999999999986544 466
Q ss_pred EEEEeccCCceEEEeecEEEeccCCch
Q 014324 145 VKAKVLQTDEVIEIKGNLLVAADGCLS 171 (426)
Q Consensus 145 v~~~~~~~g~~~~~~~d~vI~AdG~~S 171 (426)
|+ ..+| +++||.||.|+|.+|
T Consensus 167 V~---~~~g---~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 167 VT---TSAG---TVDAASLVVASGGKS 187 (417)
T ss_dssp EE---ETTE---EEEESEEEECCCCSS
T ss_pred EE---ECCc---EEEeeEEEECCCCcc
Confidence 65 4555 489999999999998
No 43
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.40 E-value=3.9e-12 Score=117.30 Aligned_cols=144 Identities=14% Similarity=0.179 Sum_probs=91.1
Q ss_pred CCccEEEEcCChHHHHHHHHHHHc--CCcEEEEcccCCCCCCCCCc----ceeccChhHHHHHHHHhcCCchhhhccCcc
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRA--GWDVVVLEKAGGPPTGSPTG----AGLGLDRPAQRIIQSWLNGRPHLLHLATVP 78 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~--G~~v~v~E~~~~~~~~~~~~----~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~ 78 (426)
..+||+||||||+|+++|+.|+++ |++|+|+|+...++.....+ ....+.+...++++.+|+... ..
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~----~~--- 150 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYE----DE--- 150 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCE----EC---
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCccc----cc---
Confidence 358999999999999999999998 99999999998765321000 112233555667777665210 00
Q ss_pred eeeccccccccccccccccccCCCcchhccHHHHHHHHHhcC-C-CCe-eEeeeeEEEEEEecC----------------
Q 014324 79 LTIDQNQATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNAL-P-PEI-FLRGHQYLSFCISEV---------------- 139 (426)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~-~~~-i~~~~~v~~~~~~~~---------------- 139 (426)
+. . ....+..++.+.|.+.+ . .++ ++++++++++..+++
T Consensus 151 ----------G~---~---------~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~ 208 (344)
T 3jsk_A 151 ----------GD---Y---------VVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDE 208 (344)
T ss_dssp ----------SS---E---------EEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------
T ss_pred ----------CC---e---------EEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccC
Confidence 00 0 00112344556666544 3 488 999999999987552
Q ss_pred C-ceEE-EEEEec---cCC------ceEEEeecEEEeccCCchhhhhhh
Q 014324 140 K-TTVT-VKAKVL---QTD------EVIEIKGNLLVAADGCLSSIRQSF 177 (426)
Q Consensus 140 ~-~~v~-v~~~~~---~~g------~~~~~~~d~vI~AdG~~S~vR~~l 177 (426)
+ ..|. |..... .+| +..+++|++||+|||+.|++++.+
T Consensus 209 g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~~ 257 (344)
T 3jsk_A 209 AKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAFS 257 (344)
T ss_dssp CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCHH
T ss_pred CCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchhhHHH
Confidence 1 1222 222111 122 335699999999999999987775
No 44
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.40 E-value=1.7e-12 Score=118.41 Aligned_cols=143 Identities=15% Similarity=0.208 Sum_probs=89.4
Q ss_pred CCccEEEEcCChHHHHHHHHHHHc-CCcEEEEcccCCCCCCCCC-cc---eeccChhHHHHHHHHhcCCchhhhccCcce
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRA-GWDVVVLEKAGGPPTGSPT-GA---GLGLDRPAQRIIQSWLNGRPHLLHLATVPL 79 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~-G~~v~v~E~~~~~~~~~~~-~~---~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~ 79 (426)
..+||+||||||+|+++|+.|+++ |.+|+|+||.+.+...... +. .+.+.+...++++.+|.. .
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~-----------~ 106 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVA-----------Y 106 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCC-----------C
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCC-----------c
Confidence 457999999999999999999997 9999999999876431110 00 111223344555555441 0
Q ss_pred eeccccccccccccccccccCCCcchhccHHHHHHHHHhcC-C-CCe-eEeeeeEEEEEEecCCceEEEEEEec----c-
Q 014324 80 TIDQNQATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNAL-P-PEI-FLRGHQYLSFCISEVKTTVTVKAKVL----Q- 151 (426)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~----~- 151 (426)
.. .+. .....+...+...|.+.+ + .|+ ++++++|+++..+++. ...+.+... .
T Consensus 107 ~~------~~~------------~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~-v~gv~~~~~~~~~~~ 167 (284)
T 1rp0_A 107 DE------QDT------------YVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNR-VGGVVTNWALVAQNH 167 (284)
T ss_dssp EE------CSS------------EEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTE-EEEEEEEEHHHHTCT
T ss_pred cc------CCC------------EEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCe-EEEEEEecccccccc
Confidence 00 000 000113455655566544 3 488 9999999999865332 112332211 1
Q ss_pred -C---CceEEEeecEEEeccCCchhhhhhh
Q 014324 152 -T---DEVIEIKGNLLVAADGCLSSIRQSF 177 (426)
Q Consensus 152 -~---g~~~~~~~d~vI~AdG~~S~vR~~l 177 (426)
+ |+..+++||.||.|+|.+|.++...
T Consensus 168 ~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 168 HTQSCMDPNVMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp TTSSCCCCEEEEEEEEEECCCSSSTTTTHH
T ss_pred CccccCceEEEECCEEEECCCCchHHHHHH
Confidence 2 3445699999999999999998764
No 45
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.39 E-value=2.4e-12 Score=125.35 Aligned_cols=162 Identities=13% Similarity=0.069 Sum_probs=88.6
Q ss_pred CCCCCCccEEEEcCChHHHHHHHHHHHcCC--cEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCch------hh
Q 014324 1 MEKKEKGKAVIVGGSIAGISCAHALLRAGW--DVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPH------LL 72 (426)
Q Consensus 1 m~~~~~~~V~IvGaG~aGl~~A~~L~~~G~--~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~------~~ 72 (426)
|+.+..+||+||||||+||++|..|+++|+ +|+|||+.+.++.. +...+... ..+.+...+ .+
T Consensus 1 M~~~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~------~~~~~~~~---~~~~ip~~~~~~~~~~~ 71 (447)
T 2gv8_A 1 MCLPTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGV------WNYTSTLS---NKLPVPSTNPILTTEPI 71 (447)
T ss_dssp --CCSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTT------CSCCSCCC---SCCCSSBCCTTCCCCCB
T ss_pred CCCCCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCe------ecCCCCCC---ccccccccccccccccc
Confidence 666677999999999999999999999999 99999998775421 10000000 000000000 00
Q ss_pred hc----cCcceeecccccccc--cccccccc-ccCCCcchhccHHHHHHHHHhcCCC-Ce-eEeeeeEEEEEEecCCceE
Q 014324 73 HL----ATVPLTIDQNQATDN--AKVTRTLA-RDDNFNFRAAHWADLHGLLYNALPP-EI-FLRGHQYLSFCISEVKTTV 143 (426)
Q Consensus 73 ~~----~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~r~~l~~~L~~~~~~-~~-i~~~~~v~~~~~~~~~~~v 143 (426)
.. ..+.... +...... ........ .........+++..+.++|.+.+.. +. ++++++|++++..+ ..+
T Consensus 72 ~~g~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~--~~~ 148 (447)
T 2gv8_A 72 VGPAALPVYPSPL-YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKD--GSW 148 (447)
T ss_dssp CCSSSCCBCCCCC-CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEET--TEE
T ss_pred ccccccCCccCch-hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCC--CeE
Confidence 00 0000000 0000000 00000000 0000011235677888888776654 55 88999999998643 356
Q ss_pred EEEEEeccCCc-eEEEeecEEEeccCCchhhh
Q 014324 144 TVKAKVLQTDE-VIEIKGNLLVAADGCLSSIR 174 (426)
Q Consensus 144 ~v~~~~~~~g~-~~~~~~d~vI~AdG~~S~vR 174 (426)
+|++.+..+|+ ..++++|.||.|+|.+|.-+
T Consensus 149 ~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p~ 180 (447)
T 2gv8_A 149 VVTYKGTKAGSPISKDIFDAVSICNGHYEVPY 180 (447)
T ss_dssp EEEEEESSTTCCEEEEEESEEEECCCSSSSBC
T ss_pred EEEEeecCCCCeeEEEEeCEEEECCCCCCCCC
Confidence 66654433466 44589999999999987543
No 46
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.36 E-value=9e-13 Score=128.32 Aligned_cols=164 Identities=18% Similarity=0.165 Sum_probs=87.6
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCC-CCcce-eccCh--hHHHHHHHHhcCCchhhhc----cC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGS-PTGAG-LGLDR--PAQRIIQSWLNGRPHLLHL----AT 76 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~-~~~~~-~~l~~--~~~~~l~~~~~~~~~~~~~----~~ 76 (426)
.++||+|||||++|+++|+.|+++|.+|+|+||.+.++... ..+.+ ..+.. ...+++..+... ...+.. ..
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 103 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGN-GRFLYSAFSIFN 103 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBT-GGGGHHHHHHSC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccC-hHHHHHHHHhcC
Confidence 45899999999999999999999999999999988754210 00101 00110 011222222110 000000 00
Q ss_pred cceeeccccccccccccccccccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCc
Q 014324 77 VPLTIDQNQATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDE 154 (426)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~ 154 (426)
......+. ...+..+.. ......++ .......+.+.|.+.++ .|+ ++++++|+++..++ +..+.|+ ..+|+
T Consensus 104 ~~~~~~~~-~~~G~~~~~-~~~g~~~p-~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~-~~v~~V~---~~~G~ 176 (447)
T 2i0z_A 104 NEDIITFF-ENLGVKLKE-EDHGRMFP-VSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYEN-GQTKAVI---LQTGE 176 (447)
T ss_dssp HHHHHHHH-HHTTCCEEE-CGGGEEEE-TTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEE---ETTCC
T ss_pred HHHHHHHH-HhcCCceEE-eeCCEEEC-CCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC-CcEEEEE---ECCCC
Confidence 00000000 000000000 00000000 01123566666766554 488 99999999998643 3225555 45675
Q ss_pred eEEEeecEEEeccCCch-----------hhhhhhc
Q 014324 155 VIEIKGNLLVAADGCLS-----------SIRQSFL 178 (426)
Q Consensus 155 ~~~~~~d~vI~AdG~~S-----------~vR~~l~ 178 (426)
. ++||.||.|+|.+| .+++.++
T Consensus 177 ~--i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G 209 (447)
T 2i0z_A 177 V--LETNHVVIAVGGKSVPQTGSTGDGYAWAEKAG 209 (447)
T ss_dssp E--EECSCEEECCCCSSSGGGSCSSHHHHHHHHTT
T ss_pred E--EECCEEEECCCCCcCCCCCCCcHHHHHHHHCC
Confidence 3 89999999999999 7777664
No 47
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.36 E-value=5.9e-11 Score=113.73 Aligned_cols=37 Identities=30% Similarity=0.381 Sum_probs=34.6
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPP 42 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~ 42 (426)
.+||+|||||++|+++|+.|+++|++|+|+||.....
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~ 40 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFN 40 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 4899999999999999999999999999999998654
No 48
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.35 E-value=4.4e-12 Score=127.12 Aligned_cols=164 Identities=16% Similarity=0.134 Sum_probs=92.3
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCC-CcceeccChhHHHHHHHHhcCC---------------
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSP-TGAGLGLDRPAQRIIQSWLNGR--------------- 68 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~-~~~~~~l~~~~~~~l~~~~~~~--------------- 68 (426)
.++||+|||||++||++|+.|+++|.+|+||||.+.++..+. .+.++.... ....+.++...
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~--~~~~~~~g~~ds~~~~~~~~~~~~~~ 197 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVG--TKQQTAHGVEDKVEWFIEDAMKGGRQ 197 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSS--CHHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccC--CHHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 458999999999999999999999999999999998754221 122222111 11122222100
Q ss_pred -----------------chhhhccCcceeeccccccccccccccccccCCCcchhccHHHHHHHHHhcCC-CCe-eEeee
Q 014324 69 -----------------PHLLHLATVPLTIDQNQATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGH 129 (426)
Q Consensus 69 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~ 129 (426)
.+.+.+.+.++.. .....+..+..... .....+....+.+.|.+.+. .|+ |++++
T Consensus 198 ~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~--~~~~~g~~~~r~~~----~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~ 271 (566)
T 1qo8_A 198 QNDIKLVTILAEQSADGVQWLESLGANLDD--LKRSGGARVDRTHR----PHGGKSSGPEIIDTLRKAAKEQGIDTRLNS 271 (566)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTTCCCCE--EECCTTCSSCCEEE----CSSSSCHHHHHHHHHHHHHHHTTCCEECSE
T ss_pred CCCHHHHHHHHhccHHHHHHHHhcCCcccc--ccccCCCCCCceee----cCCCCCCHHHHHHHHHHHHHhcCCEEEeCC
Confidence 0000111111100 00000000000000 00001234567777776654 488 99999
Q ss_pred eEEEEEEecCCceEEEEEEeccCCceEEEeecEEEeccCCchhhhhhh
Q 014324 130 QYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLVAADGCLSSIRQSF 177 (426)
Q Consensus 130 ~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI~AdG~~S~vR~~l 177 (426)
+|+++..++++..+.|++. ..+|+..++++|.||.|+|.+|..|+.+
T Consensus 272 ~v~~l~~~~~g~v~Gv~~~-~~~g~~~~i~A~~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 272 RVVKLVVNDDHSVVGAVVH-GKHTGYYMIGAKSVVLATGGYGMNKEMI 318 (566)
T ss_dssp EEEEEEECTTSBEEEEEEE-ETTTEEEEEEEEEEEECCCCCTTCHHHH
T ss_pred EEEEEEECCCCcEEEEEEE-eCCCcEEEEEcCEEEEecCCcccCHHHH
Confidence 9999987542322224432 2477766799999999999999876654
No 49
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.35 E-value=3.3e-12 Score=124.14 Aligned_cols=42 Identities=33% Similarity=0.452 Sum_probs=37.5
Q ss_pred CCCCCCccEEEEcCChHHHHHHHHHHHcCC-cEEEEcccCCCC
Q 014324 1 MEKKEKGKAVIVGGSIAGISCAHALLRAGW-DVVVLEKAGGPP 42 (426)
Q Consensus 1 m~~~~~~~V~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~~~~ 42 (426)
|+.+.++||+|||||++|+++|+.|+++|+ +|+|+||...+.
T Consensus 1 M~~~~~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~~ 43 (438)
T 3dje_A 1 MAVTKSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVPS 43 (438)
T ss_dssp -CCCTTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSSC
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCCC
Confidence 665567999999999999999999999999 999999998765
No 50
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.34 E-value=7.9e-12 Score=125.48 Aligned_cols=162 Identities=17% Similarity=0.133 Sum_probs=90.0
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCC-CcceeccChhHHHHHHHHhcCC---------------
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSP-TGAGLGLDRPAQRIIQSWLNGR--------------- 68 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~-~~~~~~l~~~~~~~l~~~~~~~--------------- 68 (426)
.++||+|||||++||++|+.|+++|.+|+||||.+.++..+. .+.++..... ...+++++..
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~--~~~~~~g~~ds~~~~~~~~~~~g~~ 202 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWT--DQQKAKKITDSPELMFEDTMKGGQN 202 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSC--HHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCC--HHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 468999999999999999999999999999999988753221 1222322111 1122222100
Q ss_pred ---c--------------hhhhccCcceeeccccccccccccccccccCCCcchhccHHHHHHHHHhcCC-CCe-eEeee
Q 014324 69 ---P--------------HLLHLATVPLTIDQNQATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGH 129 (426)
Q Consensus 69 ---~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~ 129 (426)
. +.+.+.+.++.. .....+..+...... .........+.+.|.+.+. .++ |++++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~--~~~~~g~~~~r~~~~----~~g~~~g~~l~~~L~~~~~~~gv~i~~~~ 276 (571)
T 1y0p_A 203 INDPALVKVLSSHSKDSVDWMTAMGADLTD--VGMMGGASVNRAHRP----TGGAGVGAHVVQVLYDNAVKRNIDLRMNT 276 (571)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTTCCCCE--EECCTTCSSCCEEES----TTTCCHHHHHHHHHHHHHHHTTCEEESSE
T ss_pred CCCHHHHHHHHHccHHHHHHHHhcCCCCcc--CcccCCcCCCeeEec----CCCCCCHHHHHHHHHHHHHhcCCEEEeCC
Confidence 0 000011111000 000000000000000 0000223566666766654 488 99999
Q ss_pred eEEEEEEecCCceEEEEEEeccCCceEEEeecEEEeccCCchhhhh
Q 014324 130 QYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLVAADGCLSSIRQ 175 (426)
Q Consensus 130 ~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI~AdG~~S~vR~ 175 (426)
+|+++..++++..+.|++. ..+|+..++++|.||.|+|.+|..++
T Consensus 277 ~v~~l~~~~~g~v~Gv~~~-~~~g~~~~i~a~~VVlAtGg~~~n~~ 321 (571)
T 1y0p_A 277 RGIEVLKDDKGTVKGILVK-GMYKGYYWVKADAVILATGGFAKNNE 321 (571)
T ss_dssp EEEEEEECTTSCEEEEEEE-ETTTEEEEEECSEEEECCCCCTTCHH
T ss_pred EeeEeEEcCCCeEEEEEEE-eCCCcEEEEECCeEEEeCCCcccCHH
Confidence 9999987542332224433 23677667999999999999987554
No 51
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.33 E-value=3.3e-10 Score=110.97 Aligned_cols=66 Identities=20% Similarity=0.281 Sum_probs=48.5
Q ss_pred CCCCCCccEEEEcCChHHHHHHHHHHHcC------CcEEEEcccCCCCCCCC----------Ccc--eeccChhHHHHHH
Q 014324 1 MEKKEKGKAVIVGGSIAGISCAHALLRAG------WDVVVLEKAGGPPTGSP----------TGA--GLGLDRPAQRIIQ 62 (426)
Q Consensus 1 m~~~~~~~V~IvGaG~aGl~~A~~L~~~G------~~v~v~E~~~~~~~~~~----------~~~--~~~l~~~~~~~l~ 62 (426)
|+. .++||+|||||++||++|+.|+++| ++|+|+|+++.++.... .|. .....+...++++
T Consensus 1 M~~-~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~l~~ 79 (470)
T 3i6d_A 1 MSD-GKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVK 79 (470)
T ss_dssp -----CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTTCCEESSCCCEETTCTHHHHHHH
T ss_pred CCC-CCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCCEEeccChhhhhhCCHHHHHHHH
Confidence 443 3589999999999999999999999 99999999988764211 111 1233567888999
Q ss_pred HHhcC
Q 014324 63 SWLNG 67 (426)
Q Consensus 63 ~~~~~ 67 (426)
++|+.
T Consensus 80 ~lgl~ 84 (470)
T 3i6d_A 80 DLGLE 84 (470)
T ss_dssp HTTCC
T ss_pred HcCCc
Confidence 98873
No 52
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.32 E-value=1.3e-10 Score=112.32 Aligned_cols=37 Identities=32% Similarity=0.509 Sum_probs=34.6
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPT 43 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~ 43 (426)
+||+|||||++||++|+.|+++|++|+|+|+.+.++.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG 37 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGG 37 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCc
Confidence 4899999999999999999999999999999988754
No 53
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.29 E-value=1.4e-10 Score=114.62 Aligned_cols=37 Identities=27% Similarity=0.455 Sum_probs=31.1
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPT 43 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~ 43 (426)
.+|+|||||++||+||+.|+++|++|+|+|+++.++.
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG 38 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGG 38 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-----
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCC
Confidence 4799999999999999999999999999999999864
No 54
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.28 E-value=5.5e-11 Score=117.40 Aligned_cols=36 Identities=14% Similarity=0.394 Sum_probs=33.6
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
.+||+||||||+|+++|+.|++.|++|+|||+.+.+
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~ 142 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEV 142 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcc
Confidence 479999999999999999999999999999998764
No 55
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.28 E-value=2.7e-11 Score=111.09 Aligned_cols=144 Identities=17% Similarity=0.217 Sum_probs=86.8
Q ss_pred CCccEEEEcCChHHHHHHHHHHHc--CCcEEEEcccCCCCCCCCCcc----eeccChhHHHHHHHHhcCCchhhhccCcc
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRA--GWDVVVLEKAGGPPTGSPTGA----GLGLDRPAQRIIQSWLNGRPHLLHLATVP 78 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~--G~~v~v~E~~~~~~~~~~~~~----~~~l~~~~~~~l~~~~~~~~~~~~~~~~~ 78 (426)
..+||+||||||+|+++|+.|+++ |++|+|+|+.+.++.....+. ...+.+...+.|+.+++.
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~----------- 132 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIP----------- 132 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCC-----------
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcc-----------
Confidence 346999999999999999999999 999999999988753211110 112223344455554441
Q ss_pred eeeccccccccccccccccccCCCcchhccHHHHHHHHHhcC-C-CCe-eEeeeeEEEEEEecC-C-c--eEE-EEEEec
Q 014324 79 LTIDQNQATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNAL-P-PEI-FLRGHQYLSFCISEV-K-T--TVT-VKAKVL 150 (426)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~-~~~-i~~~~~v~~~~~~~~-~-~--~v~-v~~~~~ 150 (426)
... .+. .+...+...+.+.|.+.+ . .++ ++.+++++++..+++ + . .|. |..+..
T Consensus 133 ~~~------~g~------------~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~ 194 (326)
T 2gjc_A 133 YED------EGD------------YVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWT 194 (326)
T ss_dssp CEE------CSS------------EEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEH
T ss_pred ccc------CCC------------eEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecce
Confidence 000 000 000112345566666644 3 488 999999999987542 1 1 222 332211
Q ss_pred ---cCC------ceEEEee---------------cEEEeccCCchhhhhhh
Q 014324 151 ---QTD------EVIEIKG---------------NLLVAADGCLSSIRQSF 177 (426)
Q Consensus 151 ---~~g------~~~~~~~---------------d~vI~AdG~~S~vR~~l 177 (426)
.+| +..++.| |+||.|+|+.|++.+.+
T Consensus 195 ~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~ 245 (326)
T 2gjc_A 195 LVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFC 245 (326)
T ss_dssp HHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHH
T ss_pred eecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHHHH
Confidence 122 3346899 99999999999998886
No 56
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.28 E-value=2e-10 Score=111.89 Aligned_cols=38 Identities=24% Similarity=0.322 Sum_probs=34.2
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcC-CcEEEEcccCCC
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAG-WDVVVLEKAGGP 41 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G-~~v~v~E~~~~~ 41 (426)
|.++||+|||||++|+++|+.|+++| .+|+|+|+...+
T Consensus 21 m~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~ 59 (448)
T 3axb_A 21 MPRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAP 59 (448)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSST
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCC
Confidence 56789999999999999999999999 999999994444
No 57
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.28 E-value=1.7e-11 Score=115.38 Aligned_cols=130 Identities=17% Similarity=0.185 Sum_probs=81.9
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeeccc
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQN 84 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 84 (426)
+++||+|||||++|+++|..|+++|++|+|||+.+.++. .+.. .+ . .+. ...+... .
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg------~~~~---------~~----~-~~~-~~~~~~~--~ 58 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGG------AWQH---------AW----H-SLH-LFSPAGW--S 58 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSG------GGGG---------SC----T-TCB-CSSCGGG--S
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCC------cccC---------CC----C-CcE-ecCchhh--h
Confidence 458999999999999999999999999999999987531 1100 00 0 000 0000000 0
Q ss_pred cccccccccccccccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEE-EEEEeccCCceEEEeec
Q 014324 85 QATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVT-VKAKVLQTDEVIEIKGN 161 (426)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~-v~~~~~~~g~~~~~~~d 161 (426)
.. .+. .. .........+..+.+.|.+.++ .++ ++++++|+++..+++ .+. |+ +.+| ++++|
T Consensus 59 ~~-~~~-----~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~--~~~~v~---~~~g---~~~~d 122 (357)
T 4a9w_A 59 SI-PGW-----PM--PASQGPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGE--RLRVVA---RDGR---QWLAR 122 (357)
T ss_dssp CC-SSS-----CC--CCCSSSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETT--EEEEEE---TTSC---EEEEE
T ss_pred hC-CCC-----CC--CCCccCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCC--cEEEEE---eCCC---EEEeC
Confidence 00 000 00 0011122456777777776554 377 999999999986543 555 65 5666 38999
Q ss_pred EEEeccCCchhh
Q 014324 162 LLVAADGCLSSI 173 (426)
Q Consensus 162 ~vI~AdG~~S~v 173 (426)
.||.|+|.+|.-
T Consensus 123 ~vV~AtG~~~~~ 134 (357)
T 4a9w_A 123 AVISATGTWGEA 134 (357)
T ss_dssp EEEECCCSGGGB
T ss_pred EEEECCCCCCCC
Confidence 999999998753
No 58
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.27 E-value=8.2e-12 Score=124.07 Aligned_cols=41 Identities=29% Similarity=0.362 Sum_probs=35.4
Q ss_pred CCCC--CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCC
Q 014324 1 MEKK--EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPP 42 (426)
Q Consensus 1 m~~~--~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~ 42 (426)
|+.| ..+||+|||||++||++|+.|++ |.+|+|+||.....
T Consensus 1 M~~m~~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~ 43 (540)
T 1chu_A 1 MNTLPEHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTE 43 (540)
T ss_dssp -CBCCSEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC
T ss_pred CCCCCCCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCC
Confidence 5443 35899999999999999999999 99999999998754
No 59
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.27 E-value=2e-11 Score=107.87 Aligned_cols=127 Identities=17% Similarity=0.143 Sum_probs=81.1
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeeccc
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQN 84 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 84 (426)
.++||+||||||+|+.+|+.|++.|.+|+|+|+.... .| ....+.. . +......+.+ +.
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~-----~G--~~~~~~~----~--~~~~~~~~~~------~~-- 60 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDA-----VM--MPFLPPK----P--PFPPGSLLER------AY-- 60 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGG-----TT--CCSSCCC----S--CCCTTCHHHH------HC--
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCc-----CC--cccCccc----c--ccchhhHHhh------hc--
Confidence 4589999999999999999999999999999998431 11 1111110 0 0000000000 00
Q ss_pred cccccccccccccccCCCcchhccHHHHHHHHHhcCC--CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeec
Q 014324 85 QATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP--PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGN 161 (426)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~--~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d 161 (426)
+ ... .++..+.+.|.+.++ .++ ++ +++|+++..+++ ..+.++ +.+|+. ++||
T Consensus 61 ---d----------~~g-----~~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~-~v~~v~---~~~g~~--i~a~ 115 (232)
T 2cul_A 61 ---D----------PKD-----ERVWAFHARAKYLLEGLRPLHLF-QATATGLLLEGN-RVVGVR---TWEGPP--ARGE 115 (232)
T ss_dssp ---C----------TTC-----CCHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETT-EEEEEE---ETTSCC--EECS
T ss_pred ---c----------CCC-----CCHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCC-EEEEEE---ECCCCE--EECC
Confidence 0 000 056777777777664 377 65 679999986433 222344 567764 8999
Q ss_pred EEEeccCCchhhhhhh
Q 014324 162 LLVAADGCLSSIRQSF 177 (426)
Q Consensus 162 ~vI~AdG~~S~vR~~l 177 (426)
+||.|+|.+|..+..+
T Consensus 116 ~VV~A~G~~s~~~~~~ 131 (232)
T 2cul_A 116 KVVLAVGSFLGARLFL 131 (232)
T ss_dssp EEEECCTTCSSCEEEE
T ss_pred EEEECCCCChhhceec
Confidence 9999999999888654
No 60
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.26 E-value=2.5e-10 Score=107.05 Aligned_cols=36 Identities=31% Similarity=0.467 Sum_probs=33.4
Q ss_pred ccEEEEcCChHHHHHHHHHHH---cCCcEEEEcccCCCC
Q 014324 7 GKAVIVGGSIAGISCAHALLR---AGWDVVVLEKAGGPP 42 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~---~G~~v~v~E~~~~~~ 42 (426)
+||+|||||++|+++|+.|++ +|++|+||||...++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~g 40 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSG 40 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSC
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCc
Confidence 589999999999999999999 999999999987654
No 61
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.26 E-value=1.5e-11 Score=117.65 Aligned_cols=145 Identities=16% Similarity=0.173 Sum_probs=81.1
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCC-Ccce-ec-----cChh---------HHHHHHHHhcC-
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSP-TGAG-LG-----LDRP---------AQRIIQSWLNG- 67 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~-~~~~-~~-----l~~~---------~~~~l~~~~~~- 67 (426)
+++||+||||||+|+++|+.|+++|.+|+|+||.+.++.... .+.+ .. ..+. ....+..+...
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWD 82 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHH
Confidence 468999999999999999999999999999999987532000 0000 00 0000 00011111000
Q ss_pred CchhhhccCcceeeccccccccccccccccccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecC--CceE
Q 014324 68 RPHLLHLATVPLTIDQNQATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEV--KTTV 143 (426)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~--~~~v 143 (426)
..+.+...+.+... ...+.. ++. . ....+.+.|.+.++ .|+ ++++++++++..+++ +..+
T Consensus 83 ~~~~~~~~Gi~~~~----~~~g~~----------~p~-~-~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~ 146 (401)
T 2gqf_A 83 FISLVAEQGITYHE----KELGQL----------FCD-E-GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRF 146 (401)
T ss_dssp HHHHHHHTTCCEEE----CSTTEE----------EET-T-CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCE
T ss_pred HHHHHHhCCCceEE----CcCCEE----------ccC-C-CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeE
Confidence 00000111111000 000000 000 1 34566666766665 378 999999999986421 2346
Q ss_pred EEEEEeccCCceEEEeecEEEeccCCch
Q 014324 144 TVKAKVLQTDEVIEIKGNLLVAADGCLS 171 (426)
Q Consensus 144 ~v~~~~~~~g~~~~~~~d~vI~AdG~~S 171 (426)
.|+ ..+| +++||.||.|+|.+|
T Consensus 147 ~v~---~~~g---~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 147 VLQ---VNST---QWQCKNLIVATGGLS 168 (401)
T ss_dssp EEE---ETTE---EEEESEEEECCCCSS
T ss_pred EEE---ECCC---EEECCEEEECCCCcc
Confidence 655 4444 389999999999999
No 62
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.25 E-value=7.3e-11 Score=115.29 Aligned_cols=154 Identities=12% Similarity=0.011 Sum_probs=87.0
Q ss_pred ccEEEEcCChHHHHHHHHHHH---cCCc---EEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCccee
Q 014324 7 GKAVIVGGSIAGISCAHALLR---AGWD---VVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLT 80 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~---~G~~---v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~ 80 (426)
+||+||||||+|+++|..|++ .|++ |+|||+.+.++. .+...+.. -+..++......+....
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG------~w~~~~~~--g~~~~g~~~~~~~y~~l---- 70 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGG------QWNYTWRT--GLDENGEPVHSSMYRYL---- 70 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCG------GGSCCSCC--SBCTTSSBCCCCCCTTC----
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCC------EeecCCCC--CccccCCCCcCccccch----
Confidence 699999999999999999999 9999 999999987542 11111000 00000100000000000
Q ss_pred ecccccccccc--ccccccc-c-CCCcchhccHHHHHHHHHhcCCC-Ce---eEeeeeEEEEEEecCCceEEEEEEeccC
Q 014324 81 IDQNQATDNAK--VTRTLAR-D-DNFNFRAAHWADLHGLLYNALPP-EI---FLRGHQYLSFCISEVKTTVTVKAKVLQT 152 (426)
Q Consensus 81 ~~~~~~~~~~~--~~~~~~~-~-~~~~~~~~~r~~l~~~L~~~~~~-~~---i~~~~~v~~~~~~~~~~~v~v~~~~~~~ 152 (426)
........ +...... . .......+++..+.+.|.+.++. ++ ++++++|+++...++...++|++.+..+
T Consensus 71 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~ 147 (464)
T 2xve_A 71 ---WSNGPKECLEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTT 147 (464)
T ss_dssp ---BCSSCGGGTCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTT
T ss_pred ---hhcCChhhcccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCC
Confidence 00000000 0000000 0 00011234667777777765542 33 7889999999976654567777554445
Q ss_pred CceEEEeecEEEeccCCchhhhh
Q 014324 153 DEVIEIKGNLLVAADGCLSSIRQ 175 (426)
Q Consensus 153 g~~~~~~~d~vI~AdG~~S~vR~ 175 (426)
|+..++++|.||.|+|.+|.-+.
T Consensus 148 g~~~~~~~d~VVvAtG~~s~p~~ 170 (464)
T 2xve_A 148 DTIYSEEFDYVVCCTGHFSTPYV 170 (464)
T ss_dssp TEEEEEEESEEEECCCSSSSBCC
T ss_pred CceEEEEcCEEEECCCCCCCCcc
Confidence 65556899999999998776553
No 63
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.24 E-value=3.3e-11 Score=112.66 Aligned_cols=124 Identities=14% Similarity=0.132 Sum_probs=80.0
Q ss_pred CCCCCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCccee
Q 014324 1 MEKKEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLT 80 (426)
Q Consensus 1 m~~~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~ 80 (426)
|| +.++||+||||||+|+++|+.|+++|++|+|||+.+.++ ..+ .. ..+ ...+..
T Consensus 1 m~-~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g------g~~---------~~-~~~--~~~~~~------ 55 (335)
T 2zbw_A 1 MA-ADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPG------GQL---------TA-LYP--EKYIYD------ 55 (335)
T ss_dssp ---CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSC------HHH---------HH-TCT--TSEECC------
T ss_pred CC-CCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC------Cee---------ec-cCC--Cceeec------
Confidence 44 356899999999999999999999999999999987642 111 00 000 000000
Q ss_pred eccccccccccccccccccCCCcchhccHHHHHHHHHhcCCC-Ce-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEE
Q 014324 81 IDQNQATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPP-EI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEI 158 (426)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~-~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~ 158 (426)
.. .+..+.+..+.+.|.+.+.. ++ ++++++|..+..+++ .++++ ..+|+. +
T Consensus 56 ------~~--------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~--~~~v~---~~~g~~--~ 108 (335)
T 2zbw_A 56 ------VA--------------GFPKVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGD--LFKVT---TSQGNA--Y 108 (335)
T ss_dssp ------ST--------------TCSSEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETT--EEEEE---ETTSCE--E
T ss_pred ------cC--------------CCCCCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCC--EEEEE---ECCCCE--E
Confidence 00 00113345555566555543 66 888999999986543 55555 456654 8
Q ss_pred eecEEEeccCCchhhhhh
Q 014324 159 KGNLLVAADGCLSSIRQS 176 (426)
Q Consensus 159 ~~d~vI~AdG~~S~vR~~ 176 (426)
++|.||.|+|.+|...+.
T Consensus 109 ~~~~lv~AtG~~~~~p~~ 126 (335)
T 2zbw_A 109 TAKAVIIAAGVGAFEPRR 126 (335)
T ss_dssp EEEEEEECCTTSEEEECC
T ss_pred EeCEEEECCCCCCCCCCC
Confidence 999999999998755443
No 64
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.24 E-value=2.8e-11 Score=120.15 Aligned_cols=138 Identities=20% Similarity=0.255 Sum_probs=85.4
Q ss_pred CCccEEEEcCChHHHHHHHHHH-HcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHH-hcCCchhhhccCcceeec
Q 014324 5 EKGKAVIVGGSIAGISCAHALL-RAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSW-LNGRPHLLHLATVPLTID 82 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~-~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~ 82 (426)
.++||+|||||++|+++|+.|+ +.|++|+|||+.+..+. .+... .+ +. . ...+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GG------tw~~~--------~ypg~--~-----~d~~s~-- 63 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGG------TWYWN--------RYPGA--L-----SDTESH-- 63 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCT------HHHHC--------CCTTC--E-----EEEEGG--
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCC------ccccc--------CCCCc--e-----ecCCcc--
Confidence 4589999999999999999999 99999999999887531 11000 00 00 0 000000
Q ss_pred cccccccccccccccccCCCcchhccHHHHHHHHHhcCCC-Ce---eEeeeeEEEEEEecCCceEEEEEEeccCCceEEE
Q 014324 83 QNQATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPP-EI---FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEI 158 (426)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~-~~---i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~ 158 (426)
...+... ...............+..+.+.|.+.+.+ ++ ++++++|+++..+++...++|+ ..+|++ +
T Consensus 64 ~~~~~~~----~~~~~~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~---~~~G~~--i 134 (540)
T 3gwf_A 64 LYRFSFD----RDLLQESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVT---TDHGEV--Y 134 (540)
T ss_dssp GSSCCSC----HHHHHHCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEE---ETTSCE--E
T ss_pred eeeeccc----cccccCCCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEE---EcCCCE--E
Confidence 0000000 00000001111234566777777664432 32 8899999999987776678877 677775 8
Q ss_pred eecEEEeccCCchhhh
Q 014324 159 KGNLLVAADGCLSSIR 174 (426)
Q Consensus 159 ~~d~vI~AdG~~S~vR 174 (426)
+||+||.|+|..|.-+
T Consensus 135 ~ad~lV~AtG~~s~p~ 150 (540)
T 3gwf_A 135 RAKYVVNAVGLLSAIN 150 (540)
T ss_dssp EEEEEEECCCSCCSBC
T ss_pred EeCEEEECCcccccCC
Confidence 9999999999987544
No 65
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.23 E-value=6.8e-11 Score=118.87 Aligned_cols=169 Identities=15% Similarity=0.105 Sum_probs=90.7
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcC--CcEEEEcccCCCCCCCC-Ccceec--cCh-hHH-----HHHHHH-hcC----
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAG--WDVVVLEKAGGPPTGSP-TGAGLG--LDR-PAQ-----RIIQSW-LNG---- 67 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G--~~v~v~E~~~~~~~~~~-~~~~~~--l~~-~~~-----~~l~~~-~~~---- 67 (426)
..++||+|||||++||++|+.|+++| .+|+|+||.......+. ...|+. +.+ ... +.++.- +..
T Consensus 3 ~~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~ 82 (602)
T 1kf6_A 3 TFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDV 82 (602)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHH
T ss_pred cccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHH
Confidence 34689999999999999999999999 99999999875432110 011221 111 000 111100 000
Q ss_pred ----------CchhhhccCcceeeccccccccccccccccccCCC-cch--hccHHHHHHHHHhcCC-CC-e-eEeeeeE
Q 014324 68 ----------RPHLLHLATVPLTIDQNQATDNAKVTRTLARDDNF-NFR--AAHWADLHGLLYNALP-PE-I-FLRGHQY 131 (426)
Q Consensus 68 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~r~~l~~~L~~~~~-~~-~-i~~~~~v 131 (426)
..+.+...+.++.. ...+............. ... ...-..+.+.|.+.+. .+ + +++++.+
T Consensus 83 v~~~~~~~~~~i~~L~~~Gv~f~~----~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v 158 (602)
T 1kf6_A 83 VDYFVHHCPTEMTQLELWGCPWSR----RPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFV 158 (602)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCB----CTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCccc----CCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEE
Confidence 00111222222111 00110000000000000 000 0012456666766554 46 8 9999999
Q ss_pred EEEEEecCCceEEEEEEeccCCceEEEeecEEEeccCCchhhhhhh
Q 014324 132 LSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLVAADGCLSSIRQSF 177 (426)
Q Consensus 132 ~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI~AdG~~S~vR~~l 177 (426)
+++..++ +..+.+...+..+|+...+.|+.||.|||.+|.++...
T Consensus 159 ~~l~~~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~~ 203 (602)
T 1kf6_A 159 LDILVDD-GHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYN 203 (602)
T ss_dssp EEEEEET-TEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSSB
T ss_pred EEEEEeC-CEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccccCc
Confidence 9998753 32223443345678766799999999999999987653
No 66
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.23 E-value=6.1e-11 Score=117.33 Aligned_cols=39 Identities=36% Similarity=0.488 Sum_probs=36.0
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPT 43 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~ 43 (426)
..+||+|||||++||++|+.|+++|.+|+|+||.+.++.
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG 78 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGG 78 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 358999999999999999999999999999999998754
No 67
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.23 E-value=1.5e-09 Score=104.89 Aligned_cols=37 Identities=30% Similarity=0.433 Sum_probs=34.6
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPT 43 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~ 43 (426)
+||+|||||++||++|+.|+++|++|+|+|+++.++.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG 37 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGG 37 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBT
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCC
Confidence 4899999999999999999999999999999988754
No 68
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.22 E-value=5.3e-11 Score=118.63 Aligned_cols=138 Identities=17% Similarity=0.131 Sum_probs=84.2
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeeccc
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQN 84 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 84 (426)
.++||+|||||++|+++|+.|++.|++|+|||+.+.++. . +.....|. . .+ ..+.. ..
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG--~--w~~~~~pg---------~----~~---d~~~~--~~ 72 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGG--V--WYWNRYPG---------A----RC---DIESI--EY 72 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT--H--HHHCCCTT---------C----BC---SSCTT--TS
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCC--c--ccccCCCc---------e----ee---ccccc--cc
Confidence 458999999999999999999999999999999987531 0 00000000 0 00 00000 00
Q ss_pred ccc-ccccccccccccCCCcchhccHHHHHHHHHhcCC---CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEe
Q 014324 85 QAT-DNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP---PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIK 159 (426)
Q Consensus 85 ~~~-~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~---~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~ 159 (426)
.+. ..+.. .........+.+..+.++|...+. .+. ++++++|++++.+++...++|+ .++|++ ++
T Consensus 73 ~~~f~~~~~-----~~~~~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~---~~~G~~--~~ 142 (542)
T 1w4x_A 73 CYSFSEEVL-----QEWNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVD---TNHGDR--IR 142 (542)
T ss_dssp SCCSCHHHH-----HHCCCCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEE---ETTCCE--EE
T ss_pred ccccChhhh-----hccCcccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEE---ECCCCE--EE
Confidence 000 00000 000001112345666666655332 235 8999999999987666677776 567764 89
Q ss_pred ecEEEeccCCchhhh
Q 014324 160 GNLLVAADGCLSSIR 174 (426)
Q Consensus 160 ~d~vI~AdG~~S~vR 174 (426)
||+||.|+|..|.-+
T Consensus 143 ad~vV~AtG~~s~p~ 157 (542)
T 1w4x_A 143 ARYLIMASGQLSVPQ 157 (542)
T ss_dssp EEEEEECCCSCCCCC
T ss_pred eCEEEECcCCCCCCC
Confidence 999999999987544
No 69
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.22 E-value=4.4e-11 Score=118.90 Aligned_cols=140 Identities=16% Similarity=0.115 Sum_probs=83.5
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecc
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQ 83 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 83 (426)
+..+||+|||||++|+++|+.|++.|++|+|||+++..+. . +.....|. . ....+...
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GG--t--w~~~~yPg---------~-------~~d~~~~~-- 64 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGG--T--WYWNRYPG---------C-------RLDTESYA-- 64 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT--H--HHHCCCTT---------C-------BCSSCHHH--
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCC--c--cccCCCCc---------e-------eecCchhh--
Confidence 4568999999999999999999999999999999987532 0 00000000 0 00000000
Q ss_pred ccccccccccccccccCCCcchhccHHHHHHHHHhcCCC-C--e-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEe
Q 014324 84 NQATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPP-E--I-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIK 159 (426)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~-~--~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~ 159 (426)
..+. +................+..+.+.+.+.++. + . ++++++|+++..+++...++|+ +.+|++ ++
T Consensus 65 y~~~----f~~~~~~~~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~---~~~G~~--~~ 135 (545)
T 3uox_A 65 YGYF----ALKGIIPEWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVT---LDNEEV--VT 135 (545)
T ss_dssp HCHH----HHTTSSTTCCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEE---ETTTEE--EE
T ss_pred cccc----cCcccccCCCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEE---ECCCCE--EE
Confidence 0000 0000000000111123456666666554432 2 2 8899999999987776778877 667764 89
Q ss_pred ecEEEeccCCchhhh
Q 014324 160 GNLLVAADGCLSSIR 174 (426)
Q Consensus 160 ~d~vI~AdG~~S~vR 174 (426)
||+||.|+|..|.-+
T Consensus 136 ad~lV~AtG~~s~p~ 150 (545)
T 3uox_A 136 CRFLISATGPLSASR 150 (545)
T ss_dssp EEEEEECCCSCBC--
T ss_pred eCEEEECcCCCCCCc
Confidence 999999999876544
No 70
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.22 E-value=4.9e-11 Score=112.71 Aligned_cols=122 Identities=15% Similarity=0.121 Sum_probs=80.4
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeeccc
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQN 84 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 84 (426)
..+||+||||||+|+++|+.|+++|++|+|||+.+.++ ..+. .+.+ .. . . +.
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g------g~~~----------~~~~---~~------~--~-~~ 64 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLG------GQLA----------ALYP---EK------H--I-YD 64 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC------HHHH----------HTCT---TS------E--E-CC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCC------Cccc----------ccCC---Cc------c--c-cc
Confidence 45899999999999999999999999999999987642 1110 0000 00 0 0 00
Q ss_pred cccccccccccccccCCCcchhccHHHHHHHHHhcCCC-Ce-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecE
Q 014324 85 QATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPP-EI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNL 162 (426)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~-~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~ 162 (426)
. ..+..+.+..+.+.|.+.+.. ++ ++++++|+.+...++ ..++++ ..+|+. +++|+
T Consensus 65 --~--------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~-~~~~v~---~~~g~~--~~~~~ 122 (360)
T 3ab1_A 65 --V--------------AGFPEVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDD-GTFETR---TNTGNV--YRSRA 122 (360)
T ss_dssp --S--------------TTCSSEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTT-SCEEEE---ETTSCE--EEEEE
T ss_pred --C--------------CCCCCCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCC-ceEEEE---ECCCcE--EEeeE
Confidence 0 001113345566666665543 67 889999999986433 256665 566754 89999
Q ss_pred EEeccCCchhhhhh
Q 014324 163 LVAADGCLSSIRQS 176 (426)
Q Consensus 163 vI~AdG~~S~vR~~ 176 (426)
||.|+|.+|..++.
T Consensus 123 li~AtG~~~~~~~~ 136 (360)
T 3ab1_A 123 VLIAAGLGAFEPRK 136 (360)
T ss_dssp EEECCTTCSCCBCC
T ss_pred EEEccCCCcCCCCC
Confidence 99999998765543
No 71
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.21 E-value=9.2e-11 Score=116.80 Aligned_cols=154 Identities=14% Similarity=0.138 Sum_probs=86.4
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccC-CCCCCCCCcceec-cC-hhHHHHHHHHhcCCchhhhccCcceee
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAG-GPPTGSPTGAGLG-LD-RPAQRIIQSWLNGRPHLLHLATVPLTI 81 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~-~~~~~~~~~~~~~-l~-~~~~~~l~~~~~~~~~~~~~~~~~~~~ 81 (426)
.++||+|||||+||+++|+.|++.|.+|+|+|+.. ..+.. .+....+ +. ....+.++.++..........+..+.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~-~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~- 104 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQM-SCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFR- 104 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCC-SSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEE-
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccc-cccccccchhhHHHHHHHHHhccHHHHHhhhcccchh-
Confidence 46899999999999999999999999999999985 23211 1111111 11 11222233332210000111111110
Q ss_pred ccccccccccccccccccCCCcchhccHHHHHHHHHhcCC--CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEE
Q 014324 82 DQNQATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP--PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEI 158 (426)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~--~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~ 158 (426)
......+..+ ......+++..+.+.|.+.++ .++ + ++++|+++..++ +..+.|. ..+|. ++
T Consensus 105 -~l~~~kgpav--------~~~r~~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~-g~V~GV~---t~dG~--~I 168 (651)
T 3ces_A 105 -ILNASKGPAV--------RATRAQADRVLYRQAVRTALENQPNLMI-FQQAVEDLIVEN-DRVVGAV---TQMGL--KF 168 (651)
T ss_dssp -EESTTSCGGG--------CEEEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEESS-SBEEEEE---ETTSE--EE
T ss_pred -hhhcccCccc--------ccchhhCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEecC-CEEEEEE---ECCCC--EE
Confidence 0000000000 000123566777777777664 377 6 678999997633 2223444 45674 48
Q ss_pred eecEEEeccCCchhhhhh
Q 014324 159 KGNLLVAADGCLSSIRQS 176 (426)
Q Consensus 159 ~~d~vI~AdG~~S~vR~~ 176 (426)
+||.||.|||.+|..+..
T Consensus 169 ~Ad~VVLATGt~s~~~~i 186 (651)
T 3ces_A 169 RAKAVVLTVGTFLDGKIH 186 (651)
T ss_dssp EEEEEEECCSTTTCCEEE
T ss_pred ECCEEEEcCCCCccCccc
Confidence 999999999999876654
No 72
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.21 E-value=7.2e-11 Score=99.91 Aligned_cols=113 Identities=18% Similarity=0.111 Sum_probs=77.3
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeeccccc
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQA 86 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (426)
+||+|||||++|+.+|..|++.|.+|+|+|+.+.... ....+. . .+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~-----~~~~~~----------------~-----~~-------- 47 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVK-----GVSRVP----------------N-----YP-------- 47 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTT-----TCSCCC----------------C-----ST--------
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCccc-----Cchhhh----------------c-----cC--------
Confidence 6999999999999999999999999999999874321 000000 0 00
Q ss_pred cccccccccccccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 87 TDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
+ + + ..+....+.+.+.+.++ .++ ++++ ++++++.+++ .+.++ +++| ++++|+||
T Consensus 48 --~--~----------~-~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~--~~~v~---~~~g---~i~ad~vI 103 (180)
T 2ywl_A 48 --G--L----------L-DEPSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGG--VFEVE---TEEG---VEKAERLL 103 (180)
T ss_dssp --T--C----------T-TCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSS--SEEEE---CSSC---EEEEEEEE
T ss_pred --C--C----------c-CCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCC--EEEEE---ECCC---EEEECEEE
Confidence 0 0 0 01223455555655554 477 8888 9999986433 35555 5666 38999999
Q ss_pred eccCCchhhhhhh
Q 014324 165 AADGCLSSIRQSF 177 (426)
Q Consensus 165 ~AdG~~S~vR~~l 177 (426)
.|+|..|.+++.+
T Consensus 104 ~A~G~~~~~~~~~ 116 (180)
T 2ywl_A 104 LCTHKDPTLPSLL 116 (180)
T ss_dssp ECCTTCCHHHHHH
T ss_pred ECCCCCCCccccC
Confidence 9999999886665
No 73
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.19 E-value=8.4e-11 Score=116.96 Aligned_cols=139 Identities=20% Similarity=0.159 Sum_probs=84.4
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeeccc
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQN 84 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 84 (426)
..+||+|||||++|+++|+.|++.|++|+|||+.+..+. .+..+. .-|. ....+... .
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG------tw~~~~-------ypg~-------~~dv~s~~--y 77 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGG------VWYWNR-------YPGA-------RCDVESID--Y 77 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT------HHHHCC-------CTTC-------BCSSCTTT--S
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCC------ccccCC-------CCCc-------eeCCCchh--c
Confidence 457999999999999999999999999999999887531 110000 0000 00000000 0
Q ss_pred cccccccccccccccCCCcchhccHHHHHHHHHhcCCC-C--e-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEee
Q 014324 85 QATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPP-E--I-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKG 160 (426)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~-~--~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~ 160 (426)
...-. ...............+..+.+.+.+.+++ + . ++++++|+++..+++...++|+ +.+|++ ++|
T Consensus 78 ~~~f~----~~~~~~~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~---~~~G~~--i~a 148 (549)
T 4ap3_A 78 SYSFS----PELEQEWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVR---TDRGDE--VSA 148 (549)
T ss_dssp SCCSC----HHHHHHCCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEE---ETTCCE--EEE
T ss_pred ccccc----cccccCCCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEE---ECCCCE--EEe
Confidence 00000 00000000111123456666666654432 3 2 8899999999988777778887 677875 899
Q ss_pred cEEEeccCCchhhh
Q 014324 161 NLLVAADGCLSSIR 174 (426)
Q Consensus 161 d~vI~AdG~~S~vR 174 (426)
|+||.|+|..|.-+
T Consensus 149 d~lV~AtG~~s~p~ 162 (549)
T 4ap3_A 149 RFLVVAAGPLSNAN 162 (549)
T ss_dssp EEEEECCCSEEECC
T ss_pred CEEEECcCCCCCCC
Confidence 99999999876443
No 74
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.18 E-value=1.3e-10 Score=116.40 Aligned_cols=165 Identities=20% Similarity=0.177 Sum_probs=88.7
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCC-CcceeccC-----------hhHHHHHHHH---hcC--
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSP-TGAGLGLD-----------RPAQRIIQSW---LNG-- 67 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~-~~~~~~l~-----------~~~~~~l~~~---~~~-- 67 (426)
..+||+|||||++||++|+.|+++|.+|+|+||.+.++..+. .+.++... .....+++.+ +..
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIN 204 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 357999999999999999999999999999999988753221 11122111 0111111111 100
Q ss_pred Cc--------------hhhhccCcceeeccccccccccccccccccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeE
Q 014324 68 RP--------------HLLHLATVPLTIDQNQATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQY 131 (426)
Q Consensus 68 ~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v 131 (426)
.. +.+.+.+.+... .....+..+...... .........+.+.|.+.+. .|+ |++++++
T Consensus 205 ~~~~v~~~~~~~~~~i~~l~~~Gv~~~~--~~~~gg~~~~r~~~~----~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v 278 (572)
T 1d4d_A 205 DPELVKVLANNSSDSIDWLTSMGADMTD--VGRMGGASVNRSHRP----TGGAGVGAHVAQVLWDNAVKRGTDIRLNSRV 278 (572)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHTCCCCE--EECCTTCSSCCEEES----TTTCCHHHHHHHHHHHHHHHTTCEEESSEEE
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCcccc--ccccCCCcCCeeEec----CCCCCCHHHHHHHHHHHHHHcCCeEEecCEE
Confidence 00 001111111100 000001000000000 0001223556666766554 488 9999999
Q ss_pred EEEEEecCCceEEEEEEeccCCceEEEeecEEEeccCCchhhhhh
Q 014324 132 LSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLVAADGCLSSIRQS 176 (426)
Q Consensus 132 ~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI~AdG~~S~vR~~ 176 (426)
+++..++++..+.|.+. ..+|+..++.||.||.|+|.+|..++.
T Consensus 279 ~~l~~~~~g~v~GV~~~-~~~G~~~~i~A~~VVlAtGg~~~~~~~ 322 (572)
T 1d4d_A 279 VRILEDASGKVTGVLVK-GEYTGYYVIKADAVVIAAGGFAKNNER 322 (572)
T ss_dssp EEEEEC--CCEEEEEEE-ETTTEEEEEECSEEEECCCCCTTCHHH
T ss_pred EEEEECCCCeEEEEEEE-eCCCcEEEEEcCEEEEeCCCCccCHHH
Confidence 99986432332334432 246776679999999999999976544
No 75
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.17 E-value=2.1e-10 Score=115.12 Aligned_cols=64 Identities=22% Similarity=0.195 Sum_probs=45.4
Q ss_pred HHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEEeccCCchhh
Q 014324 110 ADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLVAADGCLSSI 173 (426)
Q Consensus 110 ~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI~AdG~~S~v 173 (426)
..+.+.|.+.+. .++ |++++.++++..++++....|.+.+..+|+...+.|+.||.|+|..|.+
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~ 208 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRI 208 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCccc
Confidence 345555665543 488 9999999999874333333455444467876679999999999999864
No 76
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.17 E-value=1.2e-11 Score=118.83 Aligned_cols=37 Identities=27% Similarity=0.502 Sum_probs=33.8
Q ss_pred CccEEEEcCChHHHHHHHHHHHc--CCcEEEEcccCCCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRA--GWDVVVLEKAGGPP 42 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~--G~~v~v~E~~~~~~ 42 (426)
.+||+|||||++|+++|+.|+++ |++|+|||+.....
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~ 74 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPN 74 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSC
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 48999999999999999999999 99999999986543
No 77
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.15 E-value=4e-10 Score=111.84 Aligned_cols=154 Identities=14% Similarity=0.138 Sum_probs=87.2
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccC-CCCCCCCCccee-ccC-hhHHHHHHHHhcCCchhhhccCcceee
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAG-GPPTGSPTGAGL-GLD-RPAQRIIQSWLNGRPHLLHLATVPLTI 81 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~-~~~~~~~~~~~~-~l~-~~~~~~l~~~~~~~~~~~~~~~~~~~~ 81 (426)
.++||+|||||+||+++|+.|++.|.+|+|+|+.. ..+... +.... ++. ....+.++.++..........+..+..
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~-Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~ 104 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMS-CNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKM 104 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCC-SCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcC-ccccccccchHHHHHHHHHhhhHHHHHhhhcccceee
Confidence 35899999999999999999999999999999985 332111 11011 111 122333444432101111111111110
Q ss_pred ccccccccccccccccccCCCcchhccHHHHHHHHHhcCC--CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEE
Q 014324 82 DQNQATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP--PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEI 158 (426)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~--~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~ 158 (426)
.....+..+ ...-..+++..+.+.|.+.++ .++ + ++++|+++..++ +..+.|. ..+|.. +
T Consensus 105 --l~~~kGpav--------~~~r~~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~-g~V~GV~---t~dG~~--i 167 (637)
T 2zxi_A 105 --LNTRKGKAV--------QSPRAQADKKRYREYMKKVCENQENLYI-KQEEVVDIIVKN-NQVVGVR---TNLGVE--Y 167 (637)
T ss_dssp --ESTTSCGGG--------CEEEEEECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEESS-SBEEEEE---ETTSCE--E
T ss_pred --cccccCccc--------cchhhhCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEecC-CEEEEEE---ECCCcE--E
Confidence 000001000 000123466777777777664 377 6 678999987643 2222344 567754 8
Q ss_pred eecEEEeccCCchhhhhh
Q 014324 159 KGNLLVAADGCLSSIRQS 176 (426)
Q Consensus 159 ~~d~vI~AdG~~S~vR~~ 176 (426)
+||.||.|+|.+|..+..
T Consensus 168 ~AdaVVLATG~~s~~~~~ 185 (637)
T 2zxi_A 168 KTKAVVVTTGTFLNGVIY 185 (637)
T ss_dssp ECSEEEECCTTCBTCEEE
T ss_pred EeCEEEEccCCCccCcee
Confidence 999999999998876543
No 78
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.13 E-value=6.2e-10 Score=111.87 Aligned_cols=163 Identities=17% Similarity=0.133 Sum_probs=88.1
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCC-Ccceec--cC---hhHHH-HHHH-H--h--cC------
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSP-TGAGLG--LD---RPAQR-IIQS-W--L--NG------ 67 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~-~~~~~~--l~---~~~~~-~l~~-~--~--~~------ 67 (426)
.+||+|||||+|||++|+.|+++|.+|+|+||....+..+. ...|+. +. +...+ .+.. + + ..
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l~d~~~v~ 97 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDAIH 97 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHHH
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCCCCHHHHH
Confidence 47999999999999999999999999999999875432210 111221 11 11111 1111 0 0 00
Q ss_pred --------CchhhhccCcceeecccccccccccccccccc-CC--------Ccchh--ccHHHHHHHHHhcCC-CCe-eE
Q 014324 68 --------RPHLLHLATVPLTIDQNQATDNAKVTRTLARD-DN--------FNFRA--AHWADLHGLLYNALP-PEI-FL 126 (426)
Q Consensus 68 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--------~~~~~--~~r~~l~~~L~~~~~-~~~-i~ 126 (426)
..+.+...+.++.. ...+.......... .. ..... ..-..+.+.|.+.+. .++ |+
T Consensus 98 ~l~~~s~~~i~~L~~~Gv~f~~----~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~~~gv~i~ 173 (621)
T 2h88_A 98 YMTEQAPAAVIELENYGMPFSR----TEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYF 173 (621)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCB----CTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTTSCCEEE
T ss_pred HHHHHHHHHHHHHHHcCCCccc----CCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHHhCCCEEE
Confidence 00112222222211 01111000000000 00 00000 012356666766554 588 99
Q ss_pred eeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEEeccCCchhh
Q 014324 127 RGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLVAADGCLSSI 173 (426)
Q Consensus 127 ~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI~AdG~~S~v 173 (426)
.++.++++..+ ++....|.+.+..+|+...+.|+.||.|+|..|.+
T Consensus 174 ~~~~v~~Li~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 174 VEYFALDLLME-NGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp ETEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred EceEEEEEEEE-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 99999999864 33233344444467877679999999999999875
No 79
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.13 E-value=4.8e-10 Score=103.29 Aligned_cols=37 Identities=16% Similarity=0.269 Sum_probs=32.6
Q ss_pred CCCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 3 KKEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 3 ~~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
.|++|||+||||||||++||+.|+++|++|+|||+..
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~ 39 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT 39 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 4788999999999999999999999999999999864
No 80
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.13 E-value=4.3e-08 Score=96.04 Aligned_cols=63 Identities=22% Similarity=0.218 Sum_probs=48.1
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcC--CcEEEEcccCCCCCCCC----------Ccc--eeccChhHHHHHHHHhc
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAG--WDVVVLEKAGGPPTGSP----------TGA--GLGLDRPAQRIIQSWLN 66 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G--~~v~v~E~~~~~~~~~~----------~~~--~~~l~~~~~~~l~~~~~ 66 (426)
|.++||+|||||++||++|+.|+++| ++|+|+|++..++.... .|. .....+...++++++|+
T Consensus 2 m~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~lg~ 78 (475)
T 3lov_A 2 MSSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVARKHILTDLIEAIGL 78 (475)
T ss_dssp CCSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEETTSTHHHHHHHHTTC
T ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhhcccHHHHHHHHHcCC
Confidence 34589999999999999999999999 99999999887653110 111 12335677888888887
No 81
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.13 E-value=2.2e-09 Score=101.47 Aligned_cols=39 Identities=28% Similarity=0.504 Sum_probs=35.1
Q ss_pred CCCCCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 1 MEKKEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 1 m~~~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
||. .++||+|||||++|+++|+.|+++|++|+|+||...
T Consensus 2 ~m~-~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~ 40 (363)
T 1c0p_A 2 MMH-SQKRVVVLGSGVIGLSSALILARKGYSVHILARDLP 40 (363)
T ss_dssp CCC-CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCC-CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCC
Confidence 443 568999999999999999999999999999999864
No 82
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.12 E-value=2.2e-10 Score=108.67 Aligned_cols=36 Identities=25% Similarity=0.373 Sum_probs=33.9
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
++||+|||||++|+++|+.|+++|++|+|+|+....
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~ 37 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPP 37 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 479999999999999999999999999999998765
No 83
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.11 E-value=3.3e-10 Score=114.65 Aligned_cols=62 Identities=11% Similarity=0.071 Sum_probs=44.5
Q ss_pred HHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEEeccCCchhh
Q 014324 111 DLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLVAADGCLSSI 173 (426)
Q Consensus 111 ~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI~AdG~~S~v 173 (426)
.+...|.+.+. .++ |+.++.++++..++ +....|.+.+..+|+...+.|+.||.|+|..+.+
T Consensus 159 ~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 222 (660)
T 2bs2_A 159 TMLFAVANECLKLGVSIQDRKEAIALIHQD-GKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRI 222 (660)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEET-TEEEEEEEEETTTCCEEEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHhCCCEEEECcEEEEEEecC-CEEEEEEEEECCCCcEEEEEcCEEEEccCcchhh
Confidence 45556666554 488 99999999998643 3223344444467877679999999999999875
No 84
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.11 E-value=4.4e-10 Score=111.92 Aligned_cols=149 Identities=11% Similarity=0.139 Sum_probs=84.3
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC-CCCCCCCcceeccC----hhHHHHHHHHhcCCchhhhccCcce
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG-PPTGSPTGAGLGLD----RPAQRIIQSWLNGRPHLLHLATVPL 79 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~-~~~~~~~~~~~~l~----~~~~~~l~~~~~~~~~~~~~~~~~~ 79 (426)
..+||+|||||+||+++|+.|++.|.+|+|+|+... ++. .++.-.+. ....+.+..++..........+..+
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~---~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f 96 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVAR---MSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQF 96 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC---CSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCC---CccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCch
Confidence 468999999999999999999999999999999852 321 11111111 1122222322210001111111111
Q ss_pred eeccccccccccccccccccCCCcchhccHHHHHHHHHhcCC--CCe-eEeeeeEEEEEEecCCceEE-EEEEeccCCce
Q 014324 80 TIDQNQATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP--PEI-FLRGHQYLSFCISEVKTTVT-VKAKVLQTDEV 155 (426)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~--~~~-i~~~~~v~~~~~~~~~~~v~-v~~~~~~~g~~ 155 (426)
.. .....+..+ ...-..+++..+.+.|.+.++ .++ + ++..|+++..+++ .|. |. ..+|..
T Consensus 97 ~~--l~~~kgpav--------~~~r~~~Dr~~l~~~L~~~l~~~~GV~I-~~~~V~~L~~d~g--~V~GV~---t~~G~~ 160 (641)
T 3cp8_A 97 RM--LNRSKGPAM--------HSPRAQADKTQYSLYMRRIVEHEPNIDL-LQDTVIGVSANSG--KFSSVT---VRSGRA 160 (641)
T ss_dssp EE--ECSSSCTTT--------CEEEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEEETT--EEEEEE---ETTSCE
T ss_pred hh--cccccCccc--------cchhhhcCHHHHHHHHHHHHHhCCCCEE-EeeEEEEEEecCC--EEEEEE---ECCCcE
Confidence 10 000000000 001124567777777777664 377 6 5668998876433 443 54 567764
Q ss_pred EEEeecEEEeccCCchhhh
Q 014324 156 IEIKGNLLVAADGCLSSIR 174 (426)
Q Consensus 156 ~~~~~d~vI~AdG~~S~vR 174 (426)
++||.||.|||.++..+
T Consensus 161 --i~Ad~VVLATG~~s~~~ 177 (641)
T 3cp8_A 161 --IQAKAAILACGTFLNGL 177 (641)
T ss_dssp --EEEEEEEECCTTCBTCE
T ss_pred --EEeCEEEECcCCCCCcc
Confidence 89999999999987644
No 85
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.11 E-value=1.1e-10 Score=108.85 Aligned_cols=119 Identities=13% Similarity=0.081 Sum_probs=72.9
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecc
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQ 83 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 83 (426)
|..+||+||||||+|+++|+.|++.|++|+|||+...... ..+..+... ..+. ..
T Consensus 6 ~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~--~~gg~~~~~---------------~~~~--------~~ 60 (333)
T 1vdc_A 6 THNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDI--APGGQLTTT---------------TDVE--------NF 60 (333)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTB--CTTCGGGGC---------------SEEC--------CS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCcccc--CCCceeeec---------------cccc--------cC
Confidence 4568999999999999999999999999999998321100 011111000 0000 00
Q ss_pred ccccccccccccccccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeec
Q 014324 84 NQATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGN 161 (426)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d 161 (426)
. .++ ..+.+..+.+.|.+.+. .++ +++++ ++++.. +...++++ . +|. ++++|
T Consensus 61 ----~------------~~~-~~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~--~~~~~~v~---~-~~~--~~~~~ 114 (333)
T 1vdc_A 61 ----P------------GFP-EGILGVELTDKFRKQSERFGTTIFTET-VTKVDF--SSKPFKLF---T-DSK--AILAD 114 (333)
T ss_dssp ----T------------TCT-TCEEHHHHHHHHHHHHHHTTCEEECCC-CCEEEC--SSSSEEEE---C-SSE--EEEEE
T ss_pred ----C------------CCc-cCCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEE--cCCEEEEE---E-CCc--EEEcC
Confidence 0 000 01334556565655443 467 77776 887774 33456665 4 554 38999
Q ss_pred EEEeccCCchhh
Q 014324 162 LLVAADGCLSSI 173 (426)
Q Consensus 162 ~vI~AdG~~S~v 173 (426)
.||.|+|.++..
T Consensus 115 ~vv~A~G~~~~~ 126 (333)
T 1vdc_A 115 AVILAIGAVAKR 126 (333)
T ss_dssp EEEECCCEEECC
T ss_pred EEEECCCCCcCC
Confidence 999999998654
No 86
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.10 E-value=3.1e-10 Score=105.23 Aligned_cols=110 Identities=15% Similarity=0.080 Sum_probs=71.4
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
.+||+||||||+|+++|+.|+++|++|+|||+. ++ ..+... .....
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~g------g~~~~~---------------------~~~~~----- 60 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PG------GQLTEA---------------------GIVDD----- 60 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TT------GGGGGC---------------------CEECC-----
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CC------Ceeccc---------------------ccccc-----
Confidence 579999999999999999999999999999998 32 111000 00000
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLL 163 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 163 (426)
.. .+..+....+.+.+.+.+. .++ +++ ++++++..++ ..+.++ ..+|.. +++|.|
T Consensus 61 -~~--------------~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~--~~~~v~---~~~g~~--~~~d~l 117 (323)
T 3f8d_A 61 -YL--------------GLIEIQASDMIKVFNKHIEKYEVPVLL-DIVEKIENRG--DEFVVK---TKRKGE--FKADSV 117 (323)
T ss_dssp -ST--------------TSTTEEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC----CEEEE---ESSSCE--EEEEEE
T ss_pred -cC--------------CCCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEecC--CEEEEE---ECCCCE--EEcCEE
Confidence 00 0001233555555555443 366 777 8999988543 345555 456654 899999
Q ss_pred EeccCCchh
Q 014324 164 VAADGCLSS 172 (426)
Q Consensus 164 I~AdG~~S~ 172 (426)
|.|+|....
T Consensus 118 vlAtG~~~~ 126 (323)
T 3f8d_A 118 ILGIGVKRR 126 (323)
T ss_dssp EECCCCEEC
T ss_pred EECcCCCCc
Confidence 999998743
No 87
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.08 E-value=5.8e-10 Score=109.05 Aligned_cols=151 Identities=15% Similarity=0.015 Sum_probs=82.6
Q ss_pred CccEEEEcCChHHHHHHHHHHHcC-----CcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCccee
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAG-----WDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLT 80 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G-----~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~ 80 (426)
.+||+||||||+|+++|..|+++| ++|+|||+.+.++.. .+..+.... +.......+.....+..
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~----~~~~~~~~~------~~~~~~~~l~~~~~p~~ 99 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWH----GNTLVSQSE------LQISFLKDLVSLRNPTS 99 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSS----GGGCCSSCB------CSSCTTSSSSTTTCTTC
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCc----CCCCCCCCc------CCcchhhccccccCCCC
Confidence 469999999999999999999999 999999999976421 111000000 00000000000000000
Q ss_pred e-ccc-c-ccccccccccccccCCCcchhccHHHHHHHHHhcCCC-Ce-eEeeeeEEEEEEecCC-ce--EEEEEEeccC
Q 014324 81 I-DQN-Q-ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPP-EI-FLRGHQYLSFCISEVK-TT--VTVKAKVLQT 152 (426)
Q Consensus 81 ~-~~~-~-~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~-~~-i~~~~~v~~~~~~~~~-~~--v~v~~~~~~~ 152 (426)
. .+. + ...+... .. .......+.+..+.++|...+.. ++ ++++++|++++..++. .. ++|+..+ .+
T Consensus 100 ~~~~~~~l~~~~~~~-~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~-g~ 173 (463)
T 3s5w_A 100 PYSFVNYLHKHDRLV-DF----INLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRN-AD 173 (463)
T ss_dssp TTSHHHHHHHTTCHH-HH----HHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEE-TT
T ss_pred CCChhHhhhhcCcee-ec----ccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEec-CC
Confidence 0 000 0 0000000 00 00011224567788888776554 66 9999999999875322 22 3555322 22
Q ss_pred CceEEEeecEEEeccCCchh
Q 014324 153 DEVIEIKGNLLVAADGCLSS 172 (426)
Q Consensus 153 g~~~~~~~d~vI~AdG~~S~ 172 (426)
|+..+++||.||.|+|....
T Consensus 174 g~~~~~~~d~lVlAtG~~p~ 193 (463)
T 3s5w_A 174 GEELVRTTRALVVSPGGTPR 193 (463)
T ss_dssp SCEEEEEESEEEECCCCEEC
T ss_pred CceEEEEeCEEEECCCCCCC
Confidence 44446899999999998544
No 88
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.08 E-value=1.7e-10 Score=107.53 Aligned_cols=120 Identities=12% Similarity=0.040 Sum_probs=79.5
Q ss_pred CCC-CCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcce
Q 014324 1 MEK-KEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPL 79 (426)
Q Consensus 1 m~~-~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~ 79 (426)
||. +..+||+||||||+|+++|+.|+++|++|+|||+.+.++ ..+ ..+-+ ...+.
T Consensus 1 M~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~g------G~~----------~~~~~--~~~~~------ 56 (332)
T 3lzw_A 1 MREDTKVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLG------GQL----------SALYP--EKYIY------ 56 (332)
T ss_dssp CEEEEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC------HHH----------HHHCT--TSEEC------
T ss_pred CCCCCccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCC------cee----------hhcCC--CceEe------
Confidence 543 345899999999999999999999999999999998742 111 00000 00000
Q ss_pred eeccccccccccccccccccCCCcchhccHHHHHHHHHhcCCC-Ce-eEeeeeEEEEEEecCCceEEEEEEeccCCceEE
Q 014324 80 TIDQNQATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPP-EI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIE 157 (426)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~-~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~ 157 (426)
. ...+..+....+...+.+.+.. ++ ++++++|+++....+ ..+.++ ..+|+
T Consensus 57 ------~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~-~~~~v~---~~~g~--- 109 (332)
T 3lzw_A 57 ------D--------------VAGFPKIRAQELINNLKEQMAKFDQTICLEQAVESVEKQAD-GVFKLV---TNEET--- 109 (332)
T ss_dssp ------C--------------STTCSSEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTT-SCEEEE---ESSEE---
T ss_pred ------c--------------cCCCCCCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCC-CcEEEE---ECCCE---
Confidence 0 0001113346666667666554 77 889999999986433 355555 45554
Q ss_pred EeecEEEeccCCch
Q 014324 158 IKGNLLVAADGCLS 171 (426)
Q Consensus 158 ~~~d~vI~AdG~~S 171 (426)
+.+|.||.|+|..|
T Consensus 110 ~~~d~vVlAtG~~~ 123 (332)
T 3lzw_A 110 HYSKTVIITAGNGA 123 (332)
T ss_dssp EEEEEEEECCTTSC
T ss_pred EEeCEEEECCCCCc
Confidence 79999999999965
No 89
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.08 E-value=9.8e-10 Score=100.56 Aligned_cols=110 Identities=15% Similarity=0.099 Sum_probs=72.5
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeeccccc
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQA 86 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (426)
+||+||||||+|+++|..|+++|++|+|||+..... . +. .. ...++
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~------~-~~-----------------~~--~~~~~-------- 48 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRN------R-FA-----------------SH--SHGFL-------- 48 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGG------G-GC-----------------SC--CCSST--------
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCccc------c-cc-----------------hh--hcCCc--------
Confidence 799999999999999999999999999999875311 0 00 00 00000
Q ss_pred cccccccccccccCCCcchhccHHHHHHHHHhcCCC--CeeEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 87 TDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPP--EIFLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~--~~i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
.........+.+.+.+.+.. ++....++++++..+++ .+.++ +.+|++ +++|.||
T Consensus 49 ----------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~--~~~v~---~~~g~~--~~~d~vv 105 (297)
T 3fbs_A 49 ----------------GQDGKAPGEIIAEARRQIERYPTIHWVEGRVTDAKGSFG--EFIVE---IDGGRR--ETAGRLI 105 (297)
T ss_dssp ----------------TCTTCCHHHHHHHHHHHHTTCTTEEEEESCEEEEEEETT--EEEEE---ETTSCE--EEEEEEE
T ss_pred ----------------CCCCCCHHHHHHHHHHHHHhcCCeEEEEeEEEEEEEcCC--eEEEE---ECCCCE--EEcCEEE
Confidence 00112235555556655543 45334668999986543 45555 567764 8999999
Q ss_pred eccCCchhh
Q 014324 165 AADGCLSSI 173 (426)
Q Consensus 165 ~AdG~~S~v 173 (426)
.|+|..+..
T Consensus 106 iAtG~~~~~ 114 (297)
T 3fbs_A 106 LAMGVTDEL 114 (297)
T ss_dssp ECCCCEEEC
T ss_pred ECCCCCCCC
Confidence 999997644
No 90
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.07 E-value=3.1e-10 Score=105.96 Aligned_cols=121 Identities=14% Similarity=0.138 Sum_probs=74.1
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeeccc
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQN 84 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 84 (426)
..+||+||||||+|+++|+.|+++|++|+|||+.+.... ..|..+.... . ..
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~--~~gg~~~~~~----------------------~--~~-- 72 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGI--AAGGQLTTTT----------------------E--IE-- 72 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTB--CTTCGGGGSS----------------------E--EC--
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCC--CcCcccccch----------------------h--hc--
Confidence 458999999999999999999999999999999762111 1111110000 0 00
Q ss_pred cccccccccccccccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecE
Q 014324 85 QATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNL 162 (426)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~ 162 (426)
.+ .+ ++ ..+.+..+...|.+.+. .++ +++++ ++++.. +...+.++.....++.. +.+|.
T Consensus 73 ~~-~~------------~~-~~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~--~~~~~~v~~~~~~~~~~--~~~d~ 133 (338)
T 3itj_A 73 NF-PG------------FP-DGLTGSELMDRMREQSTKFGTEIITET-VSKVDL--SSKPFKLWTEFNEDAEP--VTTDA 133 (338)
T ss_dssp CS-TT------------CT-TCEEHHHHHHHHHHHHHHTTCEEECSC-EEEEEC--SSSSEEEEETTCSSSCC--EEEEE
T ss_pred cc-CC------------Cc-ccCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEE--cCCEEEEEEEecCCCcE--EEeCE
Confidence 00 00 00 01233555555555444 377 88888 888874 44456655211134444 89999
Q ss_pred EEeccCCchh
Q 014324 163 LVAADGCLSS 172 (426)
Q Consensus 163 vI~AdG~~S~ 172 (426)
||.|+|..+.
T Consensus 134 vvlAtG~~~~ 143 (338)
T 3itj_A 134 IILATGASAK 143 (338)
T ss_dssp EEECCCEEEC
T ss_pred EEECcCCCcC
Confidence 9999998654
No 91
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.05 E-value=3.6e-08 Score=98.57 Aligned_cols=37 Identities=24% Similarity=0.318 Sum_probs=34.2
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
..+||+|||||++|+++|+.|+++|++|+|+|+....
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~ 67 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFA 67 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 4689999999999999999999999999999998644
No 92
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.04 E-value=3.5e-10 Score=114.42 Aligned_cols=62 Identities=15% Similarity=0.120 Sum_probs=43.1
Q ss_pred HHHHHHhcCC---CCe-eEeeeeEEEEEEecC--CceEEEEEEeccCCceEEEeecEEEeccCCchhh
Q 014324 112 LHGLLYNALP---PEI-FLRGHQYLSFCISEV--KTTVTVKAKVLQTDEVIEIKGNLLVAADGCLSSI 173 (426)
Q Consensus 112 l~~~L~~~~~---~~~-i~~~~~v~~~~~~~~--~~~v~v~~~~~~~g~~~~~~~d~vI~AdG~~S~v 173 (426)
+.+.|.+.+. .++ |+.++.++++..+++ +..+.|...+..+|+...+.|+.||.|+|..+.+
T Consensus 168 i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~~ 235 (662)
T 3gyx_A 168 YKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVNV 235 (662)
T ss_dssp HHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred HHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccccc
Confidence 4444444432 277 999999999887543 1334454444567877779999999999999864
No 93
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.03 E-value=9.2e-10 Score=101.59 Aligned_cols=113 Identities=13% Similarity=0.119 Sum_probs=73.1
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCC-cEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGW-DVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
+||+||||||+|+++|+.|++.|+ +|+|||+. .++ ..+.... .+. .
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~g------g~~~~~~---------------~~~-----------~ 48 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPG------GQITGSS---------------EIE-----------N 48 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STT------CGGGGCS---------------CBC-----------C
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCC------ccccccc---------------ccc-----------c
Confidence 699999999999999999999999 99999995 221 1110000 000 0
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLL 163 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 163 (426)
+ .+ .+ ..+++..+.+.|.+.+. .++ +++ ++++++..+++ .++++ ..+|+. +++|.|
T Consensus 49 ~-~~------------~~-~~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~--~~~v~---~~~g~~--~~~~~v 106 (311)
T 2q0l_A 49 Y-PG------------VK-EVVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDS--HFVIL---AEDGKT--FEAKSV 106 (311)
T ss_dssp S-TT------------CC-SCBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEETT--EEEEE---ETTSCE--EEEEEE
T ss_pred C-CC------------Cc-ccCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCC--EEEEE---EcCCCE--EECCEE
Confidence 0 00 00 02344556666655443 366 666 78888886443 45554 456654 899999
Q ss_pred EeccCCchhhh
Q 014324 164 VAADGCLSSIR 174 (426)
Q Consensus 164 I~AdG~~S~vR 174 (426)
|.|+|..+.+.
T Consensus 107 v~AtG~~~~~~ 117 (311)
T 2q0l_A 107 IIATGGSPKRT 117 (311)
T ss_dssp EECCCEEECCC
T ss_pred EECCCCCCCCC
Confidence 99999876543
No 94
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.01 E-value=2.1e-08 Score=103.18 Aligned_cols=39 Identities=28% Similarity=0.381 Sum_probs=35.7
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPT 43 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~ 43 (426)
..+||+|||||++|+++|..|++.|++|+|+|+...++.
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 357999999999999999999999999999999887754
No 95
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.01 E-value=8.7e-10 Score=104.34 Aligned_cols=138 Identities=16% Similarity=0.163 Sum_probs=76.4
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCC-cEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCccee-e
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGW-DVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLT-I 81 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~-~ 81 (426)
|.++||+||||||+|+++|..|++.|+ +|+|||+.+ ++. .+...+.. ..+........ .
T Consensus 2 m~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg------~~~~~~~~------------~~~~~~~~~~~~~ 62 (369)
T 3d1c_A 2 MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGH------SFKHWPKS------------TRTITPSFTSNGF 62 (369)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTH------HHHTSCTT------------CBCSSCCCCCGGG
T ss_pred CccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCC------ccccCccc------------ccccCcchhcccC
Confidence 346899999999999999999999999 999999987 321 01000000 00000000000 0
Q ss_pred ccccccc-cccccccccccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEE
Q 014324 82 DQNQATD-NAKVTRTLARDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEI 158 (426)
Q Consensus 82 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~ 158 (426)
....... ......... .....+.+..+.+.+.+.++ .++ ++++++|+++..+++ .+.|+ ..+|+ +
T Consensus 63 g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~--~~~v~---~~~g~---~ 130 (369)
T 3d1c_A 63 GMPDMNAISMDTSPAFT----FNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDA--YYTIA---TTTET---Y 130 (369)
T ss_dssp TCCCTTCSSTTCCHHHH----HCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSS--SEEEE---ESSCC---E
T ss_pred Cchhhhhcccccccccc----ccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCC--eEEEE---eCCCE---E
Confidence 0000000 000000000 00112344556566655443 477 889999999986433 45554 44552 7
Q ss_pred eecEEEeccCCchh
Q 014324 159 KGNLLVAADGCLSS 172 (426)
Q Consensus 159 ~~d~vI~AdG~~S~ 172 (426)
++|.||.|+|..+.
T Consensus 131 ~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 131 HADYIFVATGDYNF 144 (369)
T ss_dssp EEEEEEECCCSTTS
T ss_pred EeCEEEECCCCCCc
Confidence 89999999999763
No 96
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.00 E-value=1.3e-09 Score=101.23 Aligned_cols=115 Identities=16% Similarity=0.139 Sum_probs=71.3
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeeccc
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQN 84 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 84 (426)
..+||+||||||+|+++|+.|+++|++|+|||+. .++ ..+.... .+. ..+
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~g------g~~~~~~---------------~~~--~~~------ 56 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPG------GQIAWSE---------------EVE--NFP------ 56 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTT------GGGGGCS---------------CBC--CST------
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCC------ccccccc---------------ccc--cCC------
Confidence 3589999999999999999999999999999998 321 1111000 000 000
Q ss_pred cccccccccccccccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEec-CCceEEEEEEeccCCceEEEeec
Q 014324 85 QATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISE-VKTTVTVKAKVLQTDEVIEIKGN 161 (426)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~-~~~~v~v~~~~~~~g~~~~~~~d 161 (426)
+ ++ ..+.+..+.+.+.+.+. .++ +++ .++.++.... +...+++. ..+|+. +++|
T Consensus 57 ----~------------~~-~~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~---~~~g~~--~~~~ 113 (325)
T 2q7v_A 57 ----G------------FP-EPIAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHPYPFTV---RGYNGE--YRAK 113 (325)
T ss_dssp ----T------------CS-SCBCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSSSCCEEE---EESSCE--EEEE
T ss_pred ----C------------CC-CCCCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCCceEEEE---ECCCCE--EEeC
Confidence 0 00 01233455555555443 366 665 6888887641 22114444 345654 8999
Q ss_pred EEEeccCCchh
Q 014324 162 LLVAADGCLSS 172 (426)
Q Consensus 162 ~vI~AdG~~S~ 172 (426)
+||.|+|..+.
T Consensus 114 ~vv~AtG~~~~ 124 (325)
T 2q7v_A 114 AVILATGADPR 124 (325)
T ss_dssp EEEECCCEEEC
T ss_pred EEEECcCCCcC
Confidence 99999998654
No 97
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.98 E-value=1.1e-09 Score=106.93 Aligned_cols=31 Identities=42% Similarity=0.580 Sum_probs=30.4
Q ss_pred cEEEEcCChHHHHHHHHHHHcCCcEEEEccc
Q 014324 8 KAVIVGGSIAGISCAHALLRAGWDVVVLEKA 38 (426)
Q Consensus 8 ~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~ 38 (426)
||+|||||++|+++|+.|+++|.+|+|+||.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 7999999999999999999999999999999
No 98
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.97 E-value=2.1e-09 Score=99.11 Aligned_cols=113 Identities=17% Similarity=0.192 Sum_probs=72.7
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
++||+||||||+|+++|+.|+++|++|+|+|+.. |..+ .. ....+ .
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~--------gG~~-~~-------------------~~~~~------~ 46 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERF--------GGQI-LD-------------------TVDIE------N 46 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSST--------TGGG-GG-------------------CCEEC------C
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC--------Ccee-cc-------------------ccccc------c
Confidence 3799999999999999999999999999998531 1111 00 00000 0
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecC-CceEEEEEEeccCCceEEEeecE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEV-KTTVTVKAKVLQTDEVIEIKGNL 162 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~-~~~v~v~~~~~~~g~~~~~~~d~ 162 (426)
+. ......+..+.+.+.+.+. .++ ++++++++.+..+.+ ...+.++ .++|+. +++|.
T Consensus 47 ~~---------------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~---~~~g~~--~~~~~ 106 (310)
T 1fl2_A 47 YI---------------SVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIE---TASGAV--LKARS 106 (310)
T ss_dssp BT---------------TBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEE---ETTSCE--EEEEE
T ss_pred cc---------------CcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEE---ECCCCE--EEeCE
Confidence 00 0001223455555555443 477 899999999875322 2245555 566754 89999
Q ss_pred EEeccCCchh
Q 014324 163 LVAADGCLSS 172 (426)
Q Consensus 163 vI~AdG~~S~ 172 (426)
||.|+|..+.
T Consensus 107 lv~AtG~~~~ 116 (310)
T 1fl2_A 107 IIVATGAKWR 116 (310)
T ss_dssp EEECCCEEEC
T ss_pred EEECcCCCcC
Confidence 9999998754
No 99
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.96 E-value=2.6e-09 Score=98.95 Aligned_cols=110 Identities=20% Similarity=0.218 Sum_probs=69.7
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
++||+||||||+|+++|+.|+++|++|+|||+. .+ |..+...+ .+. ..
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~------gg~~~~~~---------------~~~--~~-------- 63 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA-VA------GGLTAEAP---------------LVE--NY-------- 63 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-ST------TGGGGGCS---------------CBC--CB--------
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC-CC------Cccccccc---------------hhh--hc--------
Confidence 479999999999999999999999999999994 22 11111100 000 00
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLL 163 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 163 (426)
.+ +..+.+..+.+.+.+.+. .++ +++ .++.++....+ .++++ . ++.. +++|+|
T Consensus 64 --~~--------------~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~--~~~v~---~-~~~~--~~~~~l 118 (319)
T 3cty_A 64 --LG--------------FKSIVGSELAKLFADHAANYAKIREG-VEVRSIKKTQG--GFDIE---T-NDDT--YHAKYV 118 (319)
T ss_dssp --TT--------------BSSBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEETT--EEEEE---E-SSSE--EEEEEE
T ss_pred --CC--------------CcccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeCC--EEEEE---E-CCCE--EEeCEE
Confidence 00 001233445555555443 367 666 68888876433 45554 3 4443 899999
Q ss_pred EeccCCchh
Q 014324 164 VAADGCLSS 172 (426)
Q Consensus 164 I~AdG~~S~ 172 (426)
|.|+|..+.
T Consensus 119 i~AtG~~~~ 127 (319)
T 3cty_A 119 IITTGTTHK 127 (319)
T ss_dssp EECCCEEEC
T ss_pred EECCCCCcc
Confidence 999998654
No 100
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.94 E-value=5.6e-09 Score=105.88 Aligned_cols=36 Identities=28% Similarity=0.474 Sum_probs=33.2
Q ss_pred CccEEEEcCChHHHHHHHHHH---H-cCCcEEEEcccCCC
Q 014324 6 KGKAVIVGGSIAGISCAHALL---R-AGWDVVVLEKAGGP 41 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~---~-~G~~v~v~E~~~~~ 41 (426)
.+||+|||||+|||++|+.|+ + +|.+|+|+||....
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~ 61 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVE 61 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCC
Confidence 479999999999999999999 6 89999999999864
No 101
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.94 E-value=3.6e-09 Score=97.73 Aligned_cols=35 Identities=26% Similarity=0.184 Sum_probs=32.8
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
.|||+||||||||+++|+.|+++|++|+|||+...
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA 38 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 48999999999999999999999999999998754
No 102
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.93 E-value=2.1e-09 Score=100.41 Aligned_cols=34 Identities=24% Similarity=0.308 Sum_probs=31.9
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEccc
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKA 38 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~ 38 (426)
..+||+||||||+|+++|+.|++.|++|+|||+.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 46 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT 46 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 4589999999999999999999999999999965
No 103
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.91 E-value=2.1e-09 Score=105.06 Aligned_cols=34 Identities=18% Similarity=0.273 Sum_probs=32.4
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEccc
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKA 38 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~ 38 (426)
.++||+||||||+|+++|+.|++.|++|+|+|+.
T Consensus 2 ~~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~ 35 (464)
T 2a8x_A 2 THYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK 35 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3589999999999999999999999999999997
No 104
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.90 E-value=6.1e-09 Score=103.12 Aligned_cols=115 Identities=16% Similarity=0.201 Sum_probs=74.6
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecc
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQ 83 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 83 (426)
+..+||+||||||||+++|+.|+++|++|+|+|+.. |..+ .. ..... .
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~--------GG~~-~~-------------------~~~~~-~--- 257 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERF--------GGQV-LD-------------------TVDIE-N--- 257 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSST--------TGGG-TT-------------------CSCBC-C---
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCC--------CCcc-cc-------------------ccccc-c---
Confidence 356899999999999999999999999999998631 1111 00 00000 0
Q ss_pred ccccccccccccccccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecC-CceEEEEEEeccCCceEEEee
Q 014324 84 NQATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEV-KTTVTVKAKVLQTDEVIEIKG 160 (426)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~-~~~v~v~~~~~~~g~~~~~~~ 160 (426)
+. ......+..+.+.|.+.+. .++ ++.++++..+..+.+ +..++|+ +++|+. +++
T Consensus 258 --~~---------------~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~---~~~g~~--~~~ 315 (521)
T 1hyu_A 258 --YI---------------SVPKTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIE---TASGAV--LKA 315 (521)
T ss_dssp --BT---------------TBSSBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEE---ETTSCE--EEE
T ss_pred --cC---------------CCCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEE---ECCCCE--EEc
Confidence 00 0001223455555555543 478 999999999975322 2356665 567764 899
Q ss_pred cEEEeccCCchh
Q 014324 161 NLLVAADGCLSS 172 (426)
Q Consensus 161 d~vI~AdG~~S~ 172 (426)
|.||.|+|..+.
T Consensus 316 d~vVlAtG~~~~ 327 (521)
T 1hyu_A 316 RSIIIATGAKWR 327 (521)
T ss_dssp EEEEECCCEEEC
T ss_pred CEEEECCCCCcC
Confidence 999999998654
No 105
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.89 E-value=3.7e-09 Score=97.89 Aligned_cols=35 Identities=26% Similarity=0.333 Sum_probs=32.3
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCCcEEEEccc
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKA 38 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~ 38 (426)
|..+||+||||||+|+++|+.|+++|++|+|||+.
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 37 (320)
T 1trb_A 3 TKHSKLLILGSGPAGYTAAVYAARANLQPVLITGM 37 (320)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC
Confidence 35689999999999999999999999999999964
No 106
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.89 E-value=1.8e-09 Score=113.15 Aligned_cols=37 Identities=30% Similarity=0.606 Sum_probs=33.9
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCC-cEEEEcccCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGW-DVVVLEKAGGP 41 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~~~ 41 (426)
.++||+|||||++|+++|+.|+++|+ +|+|+||...+
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~~ 40 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLN 40 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCCC
Confidence 45899999999999999999999998 99999999864
No 107
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.89 E-value=7.1e-09 Score=102.11 Aligned_cols=65 Identities=12% Similarity=0.107 Sum_probs=52.0
Q ss_pred hccHHHHHHHHHhcCCC-Ce-eEeeeeEEEEEEecCC------ceEEEEEEeccCCceEEEeecEEEeccCCc
Q 014324 106 AAHWADLHGLLYNALPP-EI-FLRGHQYLSFCISEVK------TTVTVKAKVLQTDEVIEIKGNLLVAADGCL 170 (426)
Q Consensus 106 ~~~r~~l~~~L~~~~~~-~~-i~~~~~v~~~~~~~~~------~~v~v~~~~~~~g~~~~~~~d~vI~AdG~~ 170 (426)
.+.|.++.++|...++. +. |+|+++|++++..+.+ ..++|+..+.++|+..++.|+.||.|+|..
T Consensus 141 ~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~ 213 (501)
T 4b63_A 141 LPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGT 213 (501)
T ss_dssp CCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCE
T ss_pred CCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCC
Confidence 46788899998876654 45 9999999999986543 247888777778888889999999999954
No 108
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.87 E-value=1.3e-08 Score=98.51 Aligned_cols=37 Identities=32% Similarity=0.479 Sum_probs=34.4
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPT 43 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~ 43 (426)
+||+|||||++|+++|+.|+++|++|+|+|++..++.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG 38 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGG 38 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBT
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccC
Confidence 6999999999999999999999999999999887643
No 109
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.84 E-value=1e-08 Score=100.53 Aligned_cols=66 Identities=23% Similarity=0.327 Sum_probs=47.2
Q ss_pred CCCCCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCC----------Cccee--ccChhHHHHHHHHhc
Q 014324 1 MEKKEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSP----------TGAGL--GLDRPAQRIIQSWLN 66 (426)
Q Consensus 1 m~~~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~----------~~~~~--~l~~~~~~~l~~~~~ 66 (426)
|.....+||+|||||++||++|+.|+++|++|+|+|++..++.... .|..+ .-.+...++++++|+
T Consensus 11 ~~~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~~~~~~~~~~~~~gl 88 (478)
T 2ivd_A 11 MPRTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDREPATRALAAALNL 88 (478)
T ss_dssp ------CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEETTCHHHHHHHHHTTC
T ss_pred CCCCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhhhhHHHHHHHHHcCC
Confidence 3445678999999999999999999999999999999998764221 11111 114677889999887
No 110
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.84 E-value=1.8e-08 Score=92.90 Aligned_cols=38 Identities=26% Similarity=0.314 Sum_probs=33.0
Q ss_pred CCCCCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 1 MEKKEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 1 m~~~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
|+. .+|||+||||||||+++|+.|++.|++|+||||..
T Consensus 2 Mte-~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~ 39 (312)
T 4gcm_A 2 MTE-IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI 39 (312)
T ss_dssp --C-CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCC-CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 444 36999999999999999999999999999999853
No 111
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.80 E-value=4.9e-09 Score=102.91 Aligned_cols=37 Identities=30% Similarity=0.462 Sum_probs=34.2
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
.++||+||||||+|+++|+.|++.|++|+|||+.+.+
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~ 40 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKL 40 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCc
Confidence 4589999999999999999999999999999997664
No 112
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.79 E-value=4.7e-08 Score=90.08 Aligned_cols=112 Identities=15% Similarity=0.143 Sum_probs=69.4
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEE-EcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecc
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVV-LEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQ 83 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v-~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 83 (426)
..+||+||||||+|+++|+.|+++|++|+| +|| ..++ ..+.... ...
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~g------G~~~~~~--------------------~~~----- 50 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPG------GQITSSS--------------------EIE----- 50 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTT------GGGGGCS--------------------CBC-----
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCC------ceeeeec--------------------eec-----
Confidence 458999999999999999999999999999 999 3321 1110000 000
Q ss_pred ccccccccccccccccCCCcchhccHHHHHHHHHhcCCC-Ce-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeec
Q 014324 84 NQATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPP-EI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGN 161 (426)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~-~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d 161 (426)
...+. + ..+....+...+.+.+.. ++ ++++ +++++ .+++...+.+++ ..++ ++.+|
T Consensus 51 --~~~~~------------~-~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~--~~~~---~~~~d 108 (315)
T 3r9u_A 51 --NYPGV------------A-QVMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKL--EGGK---TELAK 108 (315)
T ss_dssp --CSTTC------------C-SCBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEE--TTSC---EEEEE
T ss_pred --cCCCC------------C-CCCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEE--ecCC---EEEeC
Confidence 00000 0 012335555666665543 67 7777 88888 554223455321 2233 48999
Q ss_pred EEEeccCCc
Q 014324 162 LLVAADGCL 170 (426)
Q Consensus 162 ~vI~AdG~~ 170 (426)
.||.|+|..
T Consensus 109 ~lvlAtG~~ 117 (315)
T 3r9u_A 109 AVIVCTGSA 117 (315)
T ss_dssp EEEECCCEE
T ss_pred EEEEeeCCC
Confidence 999999974
No 113
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.79 E-value=4.1e-09 Score=103.24 Aligned_cols=39 Identities=26% Similarity=0.454 Sum_probs=35.5
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCC
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPP 42 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~ 42 (426)
+.++||+||||||+|+++|..|++.|++|+|||+.+.++
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~G 42 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALG 42 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSC
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcc
Confidence 356899999999999999999999999999999987653
No 114
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.76 E-value=7.5e-09 Score=101.89 Aligned_cols=38 Identities=24% Similarity=0.330 Sum_probs=33.4
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
|.++||+||||||+|+++|+.|+++|++|+||||...+
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~ 60 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTY 60 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 45689999999999999999999999999999998764
No 115
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.76 E-value=5.1e-09 Score=102.82 Aligned_cols=36 Identities=28% Similarity=0.396 Sum_probs=33.8
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
++||+||||||+|+++|+.|++.|++|+|||+.+.+
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~ 41 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTL 41 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 589999999999999999999999999999997664
No 116
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.76 E-value=9.2e-09 Score=101.84 Aligned_cols=37 Identities=24% Similarity=0.356 Sum_probs=33.9
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
+.++||+||||||+|+++|+.|++.|++|+|||+.+.
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~ 66 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTP 66 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCc
Confidence 3568999999999999999999999999999999753
No 117
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.74 E-value=3.2e-08 Score=97.20 Aligned_cols=34 Identities=18% Similarity=0.181 Sum_probs=32.2
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEccc
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKA 38 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~ 38 (426)
.++||+||||||+|+++|+.|+++|++|+||||.
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~ 58 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY 58 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC
Confidence 4689999999999999999999999999999993
No 118
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.72 E-value=2.4e-08 Score=97.87 Aligned_cols=38 Identities=21% Similarity=0.329 Sum_probs=35.1
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPP 42 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~ 42 (426)
.++||+||||||+|+++|+.|++.|++|+|||+.+.++
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~g 39 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKE 39 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccC
Confidence 46999999999999999999999999999999998654
No 119
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.72 E-value=5.1e-08 Score=95.23 Aligned_cols=37 Identities=27% Similarity=0.384 Sum_probs=34.3
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPP 42 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~ 42 (426)
++||+||||||+|+++|..|++.|++|+||||+..++
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~G 40 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELG 40 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSS
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCC
Confidence 5899999999999999999999999999999887643
No 120
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.70 E-value=5.1e-08 Score=95.40 Aligned_cols=37 Identities=19% Similarity=0.248 Sum_probs=31.1
Q ss_pred CccEEEEcCChHHHHHHHHHHHc--CCcEEEEcccCCCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRA--GWDVVVLEKAGGPP 42 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~--G~~v~v~E~~~~~~ 42 (426)
++||+|||||++|+++|..|+++ |.+|+|||+.+.+.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~ 41 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS 41 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC----
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc
Confidence 46999999999999999999999 89999999998753
No 121
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.65 E-value=4.1e-09 Score=99.03 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=32.4
Q ss_pred ccEEEEcCChHHHHHHHHHHHcC------CcEEEEcccCCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAG------WDVVVLEKAGGP 41 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G------~~v~v~E~~~~~ 41 (426)
+||+|||||++|+++|+.|+++| .+|+|+|+....
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~ 41 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTP 41 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCC
Confidence 48999999999999999999998 999999998743
No 122
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.65 E-value=1.9e-08 Score=98.59 Aligned_cols=37 Identities=19% Similarity=0.296 Sum_probs=34.3
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
.++||+||||||+|+++|..|++.|++|+|||+.+.+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~ 41 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETL 41 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCc
Confidence 4589999999999999999999999999999998764
No 123
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.62 E-value=2e-08 Score=93.36 Aligned_cols=39 Identities=23% Similarity=0.426 Sum_probs=34.9
Q ss_pred CCccEEEEcCChHHHHHHHHHHH--cCCcEEEEcccCCCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLR--AGWDVVVLEKAGGPPT 43 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~--~G~~v~v~E~~~~~~~ 43 (426)
..+||+|||||||||++|+.|++ .|++|+||||.+.++.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG 104 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCT
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCc
Confidence 45799999999999999999985 4999999999988764
No 124
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.62 E-value=1.1e-06 Score=88.64 Aligned_cols=38 Identities=29% Similarity=0.373 Sum_probs=34.8
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPP 42 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~ 42 (426)
..+||+|||||++|+++|+.|+++|++|+|+|+....+
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~g 82 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDS 82 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCC
Confidence 35899999999999999999999999999999988764
No 125
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.61 E-value=3.7e-08 Score=96.31 Aligned_cols=36 Identities=22% Similarity=0.352 Sum_probs=33.8
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
++||+||||||+|+++|+.|++.|++|+|||+.+.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~ 37 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGAL 37 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 489999999999999999999999999999998764
No 126
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.60 E-value=6.3e-08 Score=93.11 Aligned_cols=38 Identities=32% Similarity=0.500 Sum_probs=34.6
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCCc--EEEEcccCCC
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGWD--VVVLEKAGGP 41 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~~--v~v~E~~~~~ 41 (426)
+.++||+|||||++|+++|..|+++|++ |+|+|+.+.+
T Consensus 7 ~~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~ 46 (415)
T 3lxd_A 7 AERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEI 46 (415)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSC
T ss_pred CCCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCC
Confidence 3468999999999999999999999987 9999999864
No 127
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.60 E-value=7.4e-08 Score=94.67 Aligned_cols=36 Identities=22% Similarity=0.462 Sum_probs=33.1
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
..++||+||||||+|+++|+.|++.|++|+|+||..
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~ 39 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVE 39 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecc
Confidence 356899999999999999999999999999999854
No 128
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.59 E-value=2.4e-07 Score=88.88 Aligned_cols=34 Identities=29% Similarity=0.433 Sum_probs=32.0
Q ss_pred ccEEEEcCChHHHHHHHHHHH---cCCcEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLR---AGWDVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~---~G~~v~v~E~~~~ 40 (426)
.+|+|||||++|+++|..|++ .|++|+|||+++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~ 38 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRF 38 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCC
Confidence 379999999999999999999 8999999999985
No 129
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.58 E-value=2.2e-07 Score=93.50 Aligned_cols=115 Identities=19% Similarity=0.209 Sum_probs=71.2
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHc--CCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceee
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRA--GWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTI 81 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~--G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 81 (426)
|..+||+|||||+||+++|..|++. |.+|+|||+.+.... ..+++ . ..++. ...
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~---~~~~l-------p--~~~~g----------~~~-- 89 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISF---ANCGL-------P--YYIGG----------VIT-- 89 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSB---CGGGH-------H--HHHTT----------SSC--
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccc---cCCCC-------c--hhhcC----------cCC--
Confidence 3457999999999999999999998 899999999987531 01111 0 00000 000
Q ss_pred ccccccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEee
Q 014324 82 DQNQATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKG 160 (426)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~ 160 (426)
... .... ..++... +. .++ ++++++|+++. .+...+.+. +..+|+..++++
T Consensus 90 -----~~~----~~~~------------~~~~~~~-~~--~gi~v~~~~~V~~id--~~~~~v~v~--~~~~g~~~~~~~ 141 (588)
T 3ics_A 90 -----ERQ----KLLV------------QTVERMS-KR--FNLDIRVLSEVVKIN--KEEKTITIK--NVTTNETYNEAY 141 (588)
T ss_dssp -----CGG----GGBS------------SCHHHHH-HH--TTCEEECSEEEEEEE--TTTTEEEEE--ETTTCCEEEEEC
T ss_pred -----ChH----Hhhc------------cCHHHHH-Hh--cCcEEEECCEEEEEE--CCCCEEEEe--ecCCCCEEEEeC
Confidence 000 0000 0111111 11 356 88999999987 344456543 245677666899
Q ss_pred cEEEeccCCc
Q 014324 161 NLLVAADGCL 170 (426)
Q Consensus 161 d~vI~AdG~~ 170 (426)
|.||.|+|..
T Consensus 142 d~lviAtG~~ 151 (588)
T 3ics_A 142 DVLILSPGAK 151 (588)
T ss_dssp SEEEECCCEE
T ss_pred CEEEECCCCC
Confidence 9999999974
No 130
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.57 E-value=1e-07 Score=91.99 Aligned_cols=36 Identities=31% Similarity=0.570 Sum_probs=33.0
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCC--cEEEEcccCCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGW--DVVVLEKAGGP 41 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~--~v~v~E~~~~~ 41 (426)
.+||+|||||++|+++|..|++.|+ +|+|+|+.+..
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~ 41 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVI 41 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSC
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCC
Confidence 5899999999999999999999998 79999988653
No 131
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.57 E-value=5.3e-08 Score=94.83 Aligned_cols=36 Identities=22% Similarity=0.238 Sum_probs=33.6
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
++||+||||||+|+++|..|++.|++|+|||+.+.+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 36 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKAL 36 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 379999999999999999999999999999998764
No 132
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.57 E-value=2.3e-07 Score=91.22 Aligned_cols=37 Identities=27% Similarity=0.451 Sum_probs=33.8
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcC---CcEEEEcccCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAG---WDVVVLEKAGGP 41 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G---~~v~v~E~~~~~ 41 (426)
.++||+||||||+|+++|..|++.| .+|+|||+.+..
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~ 73 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNI 73 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCC
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCC
Confidence 3589999999999999999999988 999999998764
No 133
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.57 E-value=4.3e-08 Score=95.50 Aligned_cols=33 Identities=24% Similarity=0.390 Sum_probs=31.8
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKA 38 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~ 38 (426)
++||+||||||+|+++|..|++.|++|+|||+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 489999999999999999999999999999997
No 134
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.54 E-value=2.9e-07 Score=90.19 Aligned_cols=35 Identities=40% Similarity=0.489 Sum_probs=32.6
Q ss_pred ccEEEEcCChHHHHHHHHHHHc--CCcEEEEcccCCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRA--GWDVVVLEKAGGP 41 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~--G~~v~v~E~~~~~ 41 (426)
+||+||||||+|+++|..|++. |.+|+|||+.+..
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 73 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIY 73 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCC
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 6999999999999999999997 8999999998764
No 135
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.51 E-value=1.8e-07 Score=90.92 Aligned_cols=37 Identities=41% Similarity=0.586 Sum_probs=33.8
Q ss_pred CCccEEEEcCChHHHHHHHHHHHc--CCcEEEEcccCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRA--GWDVVVLEKAGGP 41 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~--G~~v~v~E~~~~~ 41 (426)
..+||+|||||++|+++|..|++. |.+|+|||+.+..
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWV 40 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCC
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCcc
Confidence 357999999999999999999998 7899999999864
No 136
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.51 E-value=1.1e-07 Score=93.30 Aligned_cols=35 Identities=17% Similarity=0.355 Sum_probs=32.9
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
.++||+||||||+|+++|..|++.|++|+|||+..
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 46899999999999999999999999999999973
No 137
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.50 E-value=3.4e-07 Score=86.94 Aligned_cols=38 Identities=29% Similarity=0.359 Sum_probs=34.5
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPP 42 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~ 42 (426)
++++|+|||||+||+++|..|...+.+|+|||+.+..+
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~ 45 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLP 45 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCC
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCC
Confidence 46899999999999999999987899999999998753
No 138
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.50 E-value=4.8e-07 Score=87.84 Aligned_cols=35 Identities=23% Similarity=0.262 Sum_probs=32.5
Q ss_pred ccEEEEcCChHHHHHHHHHHHc--CCcEEEEcccCCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRA--GWDVVVLEKAGGP 41 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~--G~~v~v~E~~~~~ 41 (426)
+||+|||||++|+++|..|++. |.+|+|||+.+..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFI 37 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCcc
Confidence 4899999999999999999998 9999999998764
No 139
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.50 E-value=7.9e-08 Score=93.08 Aligned_cols=38 Identities=21% Similarity=0.405 Sum_probs=34.0
Q ss_pred CCCCCCccEEEEcCChHHHHHHHHHHH---cCCcEEEEcccCC
Q 014324 1 MEKKEKGKAVIVGGSIAGISCAHALLR---AGWDVVVLEKAGG 40 (426)
Q Consensus 1 m~~~~~~~V~IvGaG~aGl~~A~~L~~---~G~~v~v~E~~~~ 40 (426)
|..| .||+|||||++|+++|..|++ .|++|+|||+.+.
T Consensus 1 M~~m--~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~ 41 (437)
T 3sx6_A 1 MRGS--AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDY 41 (437)
T ss_dssp CTTS--CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSE
T ss_pred CCCC--CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCC
Confidence 4443 699999999999999999999 8999999999885
No 140
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.49 E-value=1.1e-07 Score=92.46 Aligned_cols=35 Identities=23% Similarity=0.240 Sum_probs=32.7
Q ss_pred ccEEEEcCChHHHHHHHHHHHc--CCcEEEEcccCCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRA--GWDVVVLEKAGGP 41 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~--G~~v~v~E~~~~~ 41 (426)
+||+|||||++|+++|..|++. |.+|+|||+.+.+
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNI 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 5899999999999999999998 9999999998864
No 141
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.48 E-value=1e-07 Score=91.06 Aligned_cols=43 Identities=21% Similarity=0.249 Sum_probs=36.4
Q ss_pred CCCCC-CccEEEEcCChHHHHHHHHHHHc-CCcEEEEcccCCCCC
Q 014324 1 MEKKE-KGKAVIVGGSIAGISCAHALLRA-GWDVVVLEKAGGPPT 43 (426)
Q Consensus 1 m~~~~-~~~V~IvGaG~aGl~~A~~L~~~-G~~v~v~E~~~~~~~ 43 (426)
|+.|. ++||+|||||++||++|+.|+++ |++|+|+|+++.++.
T Consensus 1 m~~m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG 45 (399)
T 1v0j_A 1 MQPMTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGG 45 (399)
T ss_dssp ---CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSG
T ss_pred CCcccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCC
Confidence 66554 68999999999999999999999 999999999987653
No 142
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.47 E-value=7.9e-07 Score=86.40 Aligned_cols=36 Identities=33% Similarity=0.386 Sum_probs=33.6
Q ss_pred ccEEEEcCChHHHHHHHHHHHc--CCcEEEEcccCCCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRA--GWDVVVLEKAGGPP 42 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~--G~~v~v~E~~~~~~ 42 (426)
+||+||||||||+++|..|+++ |.+|+|||+.+.++
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g 40 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVG 40 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCc
Confidence 5999999999999999999998 89999999998754
No 143
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.46 E-value=1.5e-07 Score=90.75 Aligned_cols=67 Identities=22% Similarity=0.265 Sum_probs=49.0
Q ss_pred CCCCCCccEEEEcCChHHHHHHHHHHHcC-CcEEEEcccCCCCCCC----------CCccee--ccChhHHHHHHHHhcC
Q 014324 1 MEKKEKGKAVIVGGSIAGISCAHALLRAG-WDVVVLEKAGGPPTGS----------PTGAGL--GLDRPAQRIIQSWLNG 67 (426)
Q Consensus 1 m~~~~~~~V~IvGaG~aGl~~A~~L~~~G-~~v~v~E~~~~~~~~~----------~~~~~~--~l~~~~~~~l~~~~~~ 67 (426)
|+.++++||+|||||++||++|+.|+++| ++|+|+|+++.++... ..|..+ ...+...++++++|..
T Consensus 1 M~~~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G~~~d~G~~~~~~~~~~~~~l~~~~g~~ 80 (424)
T 2b9w_A 1 MSISKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHGRRYEMGAIMGVPSYDTIQEIMDRTGDK 80 (424)
T ss_dssp -CCCTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETTEECCSSCCCBCTTCHHHHHHHHHHCCC
T ss_pred CCCCCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCCcccccCceeecCCcHHHHHHHHHhCCc
Confidence 55456789999999999999999999999 8999999998875421 111111 1135566778887763
No 144
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.45 E-value=9e-07 Score=86.41 Aligned_cols=34 Identities=18% Similarity=0.325 Sum_probs=32.5
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEccc
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKA 38 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~ 38 (426)
.++||+||||||+|+++|+.|++.|++|+|||+.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 36 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG 36 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999999999999999999999999997
No 145
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.45 E-value=5.4e-07 Score=88.54 Aligned_cols=38 Identities=18% Similarity=0.362 Sum_probs=34.1
Q ss_pred CCccEEEEcCChHHHHHHHHHHHc--CCcEEEEcccCCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRA--GWDVVVLEKAGGPP 42 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~--G~~v~v~E~~~~~~ 42 (426)
..+||+|||||+||+++|..|+++ |.+|+|||+.+.++
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 49 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 468999999999999999999887 89999999998653
No 146
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.45 E-value=9.4e-08 Score=94.51 Aligned_cols=38 Identities=16% Similarity=0.324 Sum_probs=35.3
Q ss_pred CccEEEEcCChHHHHHHHHHHHc-CCcEEEEcccCCCCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRA-GWDVVVLEKAGGPPT 43 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~-G~~v~v~E~~~~~~~ 43 (426)
++||+|||||++||++|+.|+++ |++|+|+|+++.++.
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG 48 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGG 48 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCG
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcC
Confidence 47999999999999999999985 999999999999875
No 147
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.45 E-value=5.9e-07 Score=86.05 Aligned_cols=37 Identities=24% Similarity=0.405 Sum_probs=33.5
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCC--cEEEEcccCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGW--DVVVLEKAGGP 41 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~--~v~v~E~~~~~ 41 (426)
.++||+||||||+|+++|..|++.|. +|+|||+.+..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~ 44 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAER 44 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCC
Confidence 45899999999999999999999998 49999998764
No 148
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.45 E-value=3.1e-07 Score=90.13 Aligned_cols=34 Identities=26% Similarity=0.485 Sum_probs=32.1
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEccc
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKA 38 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~ 38 (426)
.++||+||||||+|+++|+.|++.|++|+||||.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 5789999999999999999999999999999964
No 149
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.41 E-value=7.2e-07 Score=86.10 Aligned_cols=33 Identities=21% Similarity=0.385 Sum_probs=30.4
Q ss_pred cEEEEcCChHHHHHHHHHHHcC--CcEEEEcccCC
Q 014324 8 KAVIVGGSIAGISCAHALLRAG--WDVVVLEKAGG 40 (426)
Q Consensus 8 ~V~IvGaG~aGl~~A~~L~~~G--~~v~v~E~~~~ 40 (426)
+|+|||||+||+++|..|++.+ ++|+|||+++.
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC
Confidence 7999999999999999999876 79999998875
No 150
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.41 E-value=4.6e-07 Score=89.00 Aligned_cols=111 Identities=23% Similarity=0.238 Sum_probs=71.2
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
.+||+||||||+|+++|..|+++ ++|+|||+.+.++. .+... ... .
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG------~~~~~---------------------~~~--~---- 153 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGG------DMWLK---------------------GIK--Q---- 153 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSC------SGGGT---------------------CSE--E----
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCC------eeecc---------------------ccc--c----
Confidence 46999999999999999999999 99999999987531 11000 000 0
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
. + ++. ....+...+.+.+..++ ++.++++.++..+. ..+.+.. ..+++..++.+|.||
T Consensus 154 ~--g------------~~~---~~~~~~~~l~~~l~~~v~~~~~~~v~~i~~~~--~~~~~~~--~~~~~~~~~~~d~lv 212 (493)
T 1y56_A 154 E--G------------FNK---DSRKVVEELVGKLNENTKIYLETSALGVFDKG--EYFLVPV--VRGDKLIEILAKRVV 212 (493)
T ss_dssp T--T------------TTE---EHHHHHHHHHHTCCTTEEEETTEEECCCEECS--SSEEEEE--EETTEEEEEEESCEE
T ss_pred C--C------------CCC---CHHHHHHHHHHHHhcCCEEEcCCEEEEEEcCC--cEEEEEE--ecCCeEEEEECCEEE
Confidence 0 0 000 11233344445445577 88899998887533 2343321 245554568999999
Q ss_pred eccCCch
Q 014324 165 AADGCLS 171 (426)
Q Consensus 165 ~AdG~~S 171 (426)
.|+|...
T Consensus 213 lAtGa~~ 219 (493)
T 1y56_A 213 LATGAID 219 (493)
T ss_dssp ECCCEEE
T ss_pred ECCCCCc
Confidence 9999754
No 151
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.41 E-value=8.8e-07 Score=88.71 Aligned_cols=36 Identities=25% Similarity=0.373 Sum_probs=33.0
Q ss_pred ccEEEEcCChHHHHHHHHHHHc--CCcEEEEcccCCCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRA--GWDVVVLEKAGGPP 42 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~--G~~v~v~E~~~~~~ 42 (426)
+||+||||||||+++|..|+++ |.+|+|||+.+.+.
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~ 39 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS 39 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 4899999999999999999998 79999999998753
No 152
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.41 E-value=2.2e-07 Score=91.49 Aligned_cols=34 Identities=29% Similarity=0.389 Sum_probs=32.4
Q ss_pred CccEEEEcCChHHHHHHHHHHHc---CCcEEEEcccC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRA---GWDVVVLEKAG 39 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~---G~~v~v~E~~~ 39 (426)
++||+||||||+|+++|..|++. |++|+|||+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 37999999999999999999999 99999999987
No 153
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.40 E-value=1.4e-07 Score=93.46 Aligned_cols=41 Identities=34% Similarity=0.490 Sum_probs=37.1
Q ss_pred CCCCccEEEEcCChHHHHHHHHHHHcC-CcEEEEcccCCCCC
Q 014324 3 KKEKGKAVIVGGSIAGISCAHALLRAG-WDVVVLEKAGGPPT 43 (426)
Q Consensus 3 ~~~~~~V~IvGaG~aGl~~A~~L~~~G-~~v~v~E~~~~~~~ 43 (426)
.|..+||+|||||++||++|..|+++| ++|+|+|++..++.
T Consensus 5 ~~~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGG 46 (516)
T 1rsg_A 5 SPAKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGG 46 (516)
T ss_dssp -CEEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBT
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCC
Confidence 345689999999999999999999999 99999999998865
No 154
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.40 E-value=2.4e-07 Score=90.06 Aligned_cols=39 Identities=15% Similarity=0.144 Sum_probs=36.5
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPT 43 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~ 43 (426)
..+||+|||||++||++|+.|+++|++|+|+|+++.++.
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG 48 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGG 48 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCc
Confidence 458999999999999999999999999999999998865
No 155
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.38 E-value=9e-07 Score=85.42 Aligned_cols=35 Identities=20% Similarity=0.365 Sum_probs=32.5
Q ss_pred ccEEEEcCChHHHHHHHHHHH--cCCcEEEEcccCCC
Q 014324 7 GKAVIVGGSIAGISCAHALLR--AGWDVVVLEKAGGP 41 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~--~G~~v~v~E~~~~~ 41 (426)
.||+|||||++|+++|..|++ .|++|+|||+.+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~ 39 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYF 39 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCC
Confidence 589999999999999999999 78999999998763
No 156
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.38 E-value=1.2e-06 Score=84.65 Aligned_cols=35 Identities=31% Similarity=0.547 Sum_probs=31.3
Q ss_pred ccEEEEcCChHHHHHHHHHHHcC--CcEEEEcccCCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAG--WDVVVLEKAGGP 41 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G--~~v~v~E~~~~~ 41 (426)
.+|+||||||||+++|..|++.| .+|+|||+.+..
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~ 37 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDM 37 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 37999999999999999999998 579999998764
No 157
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.36 E-value=1e-06 Score=85.91 Aligned_cols=102 Identities=17% Similarity=0.166 Sum_probs=71.8
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeeccccc
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQA 86 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (426)
.+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.. . ..+.
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----~---~~~~------------------------------ 211 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP-----Q---GDPE------------------------------ 211 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----T---SCHH------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc-----c---cCHH------------------------------
Confidence 5899999999999999999999999999999876421 0 0000
Q ss_pred cccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccC--CceEEEeecEE
Q 014324 87 TDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQT--DEVIEIKGNLL 163 (426)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~--g~~~~~~~d~v 163 (426)
. ...+.+.|.+ .|+ +++++++.+++.++ ..+.+++. .+ |+..++.+|.|
T Consensus 212 ---------~------------~~~l~~~l~~---~gV~i~~~~~v~~i~~~~--~~~~v~~~--~~~~g~~~~i~~D~v 263 (464)
T 2eq6_A 212 ---------T------------AALLRRALEK---EGIRVRTKTKAVGYEKKK--DGLHVRLE--PAEGGEGEEVVVDKV 263 (464)
T ss_dssp ---------H------------HHHHHHHHHH---TTCEEECSEEEEEEEEET--TEEEEEEE--ETTCCSCEEEEESEE
T ss_pred ---------H------------HHHHHHHHHh---cCCEEEcCCEEEEEEEeC--CEEEEEEe--ecCCCceeEEEcCEE
Confidence 0 0122233322 478 99999999998543 34555532 15 76446899999
Q ss_pred EeccCCchhhh
Q 014324 164 VAADGCLSSIR 174 (426)
Q Consensus 164 I~AdG~~S~vR 174 (426)
|.|+|..+.+.
T Consensus 264 v~a~G~~p~~~ 274 (464)
T 2eq6_A 264 LVAVGRKPRTE 274 (464)
T ss_dssp EECSCEEESCT
T ss_pred EECCCcccCCC
Confidence 99999887654
No 158
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.36 E-value=2.1e-06 Score=82.27 Aligned_cols=36 Identities=22% Similarity=0.512 Sum_probs=33.0
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCc--EEEEcccCCCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWD--VVVLEKAGGPP 42 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~--v~v~E~~~~~~ 42 (426)
.+|+|||||+||+++|..|+++|++ |+|||+.+.++
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~ 40 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLP 40 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCC
Confidence 4899999999999999999999987 99999988753
No 159
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.35 E-value=2.3e-07 Score=90.21 Aligned_cols=65 Identities=25% Similarity=0.268 Sum_probs=48.1
Q ss_pred CCCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCC----cc-----eecc---ChhHHHHHHHHhcC
Q 014324 3 KKEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPT----GA-----GLGL---DRPAQRIIQSWLNG 67 (426)
Q Consensus 3 ~~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~----~~-----~~~l---~~~~~~~l~~~~~~ 67 (426)
++.++||+|||||++||++|+.|+++|++|+|+|++..++..... |. +..+ .+...++++++|+.
T Consensus 2 ~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~g~~ 78 (453)
T 2yg5_A 2 PTLQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSPDQTALISLLDELGLK 78 (453)
T ss_dssp CEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCTTCHHHHHHHHHTTCC
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCCceeccCCeEecCccHHHHHHHHHcCCc
Confidence 345689999999999999999999999999999999887642210 11 0112 34566778888763
No 160
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.34 E-value=4.9e-06 Score=79.54 Aligned_cols=35 Identities=20% Similarity=0.344 Sum_probs=32.8
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCC--cEEEEcccCCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGW--DVVVLEKAGGP 41 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~--~v~v~E~~~~~ 41 (426)
.+|+|||||++|+++|..|+++|+ +|+|||+.+..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~ 38 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHL 38 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCC
Confidence 589999999999999999999998 89999999864
No 161
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.31 E-value=4.7e-07 Score=88.73 Aligned_cols=42 Identities=26% Similarity=0.299 Sum_probs=36.1
Q ss_pred CCCCCCccEEEEcCChHHHHHHHHHHHcC-CcEEEEcccCCCC
Q 014324 1 MEKKEKGKAVIVGGSIAGISCAHALLRAG-WDVVVLEKAGGPP 42 (426)
Q Consensus 1 m~~~~~~~V~IvGaG~aGl~~A~~L~~~G-~~v~v~E~~~~~~ 42 (426)
||.+..+||+|||||++||++|+.|+++| .+|+|+|+.+.++
T Consensus 4 m~~~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~G 46 (484)
T 4dsg_A 4 MAELLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPG 46 (484)
T ss_dssp ---CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSS
T ss_pred CCcccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 45556789999999999999999999999 7999999998765
No 162
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.31 E-value=1.8e-06 Score=81.99 Aligned_cols=100 Identities=21% Similarity=0.276 Sum_probs=72.0
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||||++|+.+|..|++.|.+|+|+|+.+.+.. . . +.
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-----~-~-~~------------------------------- 186 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMP-----G-L-LH------------------------------- 186 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-----T-T-SC-------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhh-----c-c-cC-------------------------------
Confidence 46899999999999999999999999999999876421 0 0 00
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcC-CCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNAL-PPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLL 163 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 163 (426)
..+.+.+.+.+ +.|+ ++.++++.+++.++ ..+.++ +.+|++ +++|.|
T Consensus 187 ------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~~v~---~~~g~~--i~~d~v 235 (384)
T 2v3a_A 187 ------------------------PAAAKAVQAGLEGLGVRFHLGPVLASLKKAG--EGLEAH---LSDGEV--IPCDLV 235 (384)
T ss_dssp ------------------------HHHHHHHHHHHHTTTCEEEESCCEEEEEEET--TEEEEE---ETTSCE--EEESEE
T ss_pred ------------------------HHHHHHHHHHHHHcCCEEEeCCEEEEEEecC--CEEEEE---ECCCCE--EECCEE
Confidence 11122233322 2478 99999999998543 345555 567764 899999
Q ss_pred EeccCCchhhh
Q 014324 164 VAADGCLSSIR 174 (426)
Q Consensus 164 I~AdG~~S~vR 174 (426)
|.|+|..+...
T Consensus 236 v~a~G~~p~~~ 246 (384)
T 2v3a_A 236 VSAVGLRPRTE 246 (384)
T ss_dssp EECSCEEECCH
T ss_pred EECcCCCcCHH
Confidence 99999887653
No 163
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.31 E-value=3.6e-06 Score=82.35 Aligned_cols=107 Identities=20% Similarity=0.233 Sum_probs=73.8
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.. . +.+..
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------~--~~~~~---------------------------- 226 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA------S--MDGEV---------------------------- 226 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS------S--SCHHH----------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc------c--cCHHH----------------------------
Confidence 35899999999999999999999999999999886421 0 10000
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
...+.+.|. +.|+ +++++++.+++..+++..+.+++.+..+|+..++.+|.||
T Consensus 227 -----------------------~~~l~~~l~---~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv 280 (478)
T 1v59_A 227 -----------------------AKATQKFLK---KQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLL 280 (478)
T ss_dssp -----------------------HHHHHHHHH---HTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEE
T ss_pred -----------------------HHHHHHHHH---HCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEE
Confidence 012222232 2477 9999999999852234455665433334544568999999
Q ss_pred eccCCchhhh
Q 014324 165 AADGCLSSIR 174 (426)
Q Consensus 165 ~AdG~~S~vR 174 (426)
.|.|..+.+.
T Consensus 281 ~a~G~~p~~~ 290 (478)
T 1v59_A 281 VAVGRRPYIA 290 (478)
T ss_dssp ECSCEEECCT
T ss_pred ECCCCCcCCC
Confidence 9999877654
No 164
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.30 E-value=5e-07 Score=84.83 Aligned_cols=38 Identities=37% Similarity=0.537 Sum_probs=34.9
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEccc-CCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKA-GGPP 42 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~-~~~~ 42 (426)
..+||+|||||++||++|+.|+++|++|+|||++ ..++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vG 81 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVG 81 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCB
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccC
Confidence 4679999999999999999999999999999999 7654
No 165
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.28 E-value=7.9e-07 Score=87.86 Aligned_cols=36 Identities=19% Similarity=0.330 Sum_probs=33.3
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
.|||+||||||+|+++|..+++.|.+|+|+|+....
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~ 77 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPS 77 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccc
Confidence 389999999999999999999999999999987653
No 166
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.27 E-value=4.5e-07 Score=88.44 Aligned_cols=39 Identities=18% Similarity=0.275 Sum_probs=34.3
Q ss_pred CCCCCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 1 MEKKEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 1 m~~~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
|+.|.++||+||||||+|+++|..|++.|++|+|||+.+
T Consensus 1 m~~m~~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 1 MTPMKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp ---CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCcccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 666667999999999999999999999999999999986
No 167
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.26 E-value=2.9e-06 Score=85.49 Aligned_cols=34 Identities=18% Similarity=0.360 Sum_probs=32.0
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEccc
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKA 38 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~ 38 (426)
..+||+||||||||+++|..|++.|++|+|||+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 4689999999999999999999999999999984
No 168
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.26 E-value=2.2e-06 Score=83.41 Aligned_cols=99 Identities=18% Similarity=0.256 Sum_probs=70.5
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||||++|+.+|..|++.|.+|+|+|+.+.+.. . ..+..
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~-----~---~~~~~---------------------------- 210 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILP-----T---MDLEV---------------------------- 210 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-----T---SCHHH----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcccc-----c---cCHHH----------------------------
Confidence 35899999999999999999999999999999876421 0 00000
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
...+.+.|.+ .|+ ++.++++.+++.++ ..+.++ +.+|+. +++|.||
T Consensus 211 -----------------------~~~l~~~l~~---~Gv~i~~~~~V~~i~~~~--~~v~v~---~~~g~~--i~~D~vv 257 (455)
T 2yqu_A 211 -----------------------SRAAERVFKK---QGLTIRTGVRVTAVVPEA--KGARVE---LEGGEV--LEADRVL 257 (455)
T ss_dssp -----------------------HHHHHHHHHH---HTCEEECSCCEEEEEEET--TEEEEE---ETTSCE--EEESEEE
T ss_pred -----------------------HHHHHHHHHH---CCCEEEECCEEEEEEEeC--CEEEEE---ECCCeE--EEcCEEE
Confidence 0112222322 377 99999999998543 345555 456654 8999999
Q ss_pred eccCCchhh
Q 014324 165 AADGCLSSI 173 (426)
Q Consensus 165 ~AdG~~S~v 173 (426)
.|+|..+.+
T Consensus 258 ~A~G~~p~~ 266 (455)
T 2yqu_A 258 VAVGRRPYT 266 (455)
T ss_dssp ECSCEEECC
T ss_pred ECcCCCcCC
Confidence 999998765
No 169
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.25 E-value=8.4e-07 Score=87.17 Aligned_cols=39 Identities=36% Similarity=0.570 Sum_probs=36.3
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPT 43 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~ 43 (426)
.++||+|||||++||++|+.|+++|++|+|||+.+.++.
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG 48 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGG 48 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCC
Confidence 468999999999999999999999999999999988764
No 170
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.24 E-value=8.9e-07 Score=83.84 Aligned_cols=39 Identities=23% Similarity=0.273 Sum_probs=35.6
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPT 43 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~ 43 (426)
..+||+|||||++||++|+.|+++|++|+|+|+++.++.
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG 66 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGG 66 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSG
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCC
Confidence 458999999999999999999999999999999987653
No 171
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.23 E-value=1.2e-06 Score=86.46 Aligned_cols=61 Identities=21% Similarity=0.290 Sum_probs=47.7
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCC----------Cccee--ccChhHHHHHHHHhc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSP----------TGAGL--GLDRPAQRIIQSWLN 66 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~----------~~~~~--~l~~~~~~~l~~~~~ 66 (426)
.+||+|||||++||++|+.|+++|++|+|+|+++.++.... .|..+ ...+...++++++|+
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~lgl 85 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGL 85 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHTTC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccCcHHHHHHHHHcCC
Confidence 47999999999999999999999999999999998764210 11111 123667889999887
No 172
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.22 E-value=7.9e-07 Score=88.09 Aligned_cols=63 Identities=27% Similarity=0.342 Sum_probs=46.7
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCC-----------Cccee--ccChhHHHHHHHHhcC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSP-----------TGAGL--GLDRPAQRIIQSWLNG 67 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~-----------~~~~~--~l~~~~~~~l~~~~~~ 67 (426)
.++||+|||||++||++|..|+++|++|+|+|+++.++.... .|..+ ...+...++++++|+.
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~ 78 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLE 78 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCCcHHHHHHHHHcCCc
Confidence 357999999999999999999999999999999988754210 11111 1134566778888763
No 173
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.22 E-value=8.3e-07 Score=86.54 Aligned_cols=33 Identities=18% Similarity=0.301 Sum_probs=31.8
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcc
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEK 37 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~ 37 (426)
.++||+||||||+|+++|+.|+++|++|+||||
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk 36 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE 36 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC
Confidence 468999999999999999999999999999999
No 174
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.21 E-value=7.4e-07 Score=87.31 Aligned_cols=36 Identities=19% Similarity=0.311 Sum_probs=33.2
Q ss_pred CCCCccEEEEcCChHHHHHHHHHHHcCCcEEEEccc
Q 014324 3 KKEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKA 38 (426)
Q Consensus 3 ~~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~ 38 (426)
.+.++||+||||||+|+++|+.|++.|++|+|||+.
T Consensus 17 ~~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~ 52 (478)
T 3dk9_A 17 AVASYDYLVIGGGSGGLASARRAAELGARAAVVESH 52 (478)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 345689999999999999999999999999999976
No 175
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.20 E-value=4.6e-06 Score=79.62 Aligned_cols=34 Identities=29% Similarity=0.442 Sum_probs=30.5
Q ss_pred ccEEEEcCChHHHHHHHHHHHcC--CcEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAG--WDVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G--~~v~v~E~~~~ 40 (426)
.+|+|||||+||+++|..|++.| .+|+|||+++.
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 57999999999999999999876 58999998765
No 176
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.20 E-value=1e-06 Score=83.66 Aligned_cols=38 Identities=21% Similarity=0.360 Sum_probs=35.1
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPP 42 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~ 42 (426)
+++||+|||||++|+++|..|+++|++|+|+|+++.++
T Consensus 2 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 2 KSKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIG 39 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcC
Confidence 34799999999999999999999999999999998765
No 177
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.17 E-value=4.3e-06 Score=78.77 Aligned_cols=34 Identities=35% Similarity=0.489 Sum_probs=31.9
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
.||+||||||||+++|..|++.| +|+|+|+.+..
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~ 42 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVP 42 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSC
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCC
Confidence 59999999999999999999999 99999998764
No 178
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.15 E-value=1.2e-06 Score=85.84 Aligned_cols=37 Identities=30% Similarity=0.457 Sum_probs=34.7
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCC--cEEEEcccCCCCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGW--DVVVLEKAGGPPT 43 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~--~v~v~E~~~~~~~ 43 (426)
+||+|||||++||++|+.|+++|. +|+|||+++.++.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG 41 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGG 41 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBT
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCC
Confidence 599999999999999999999999 9999999988754
No 179
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.14 E-value=1.9e-05 Score=76.88 Aligned_cols=145 Identities=9% Similarity=-0.022 Sum_probs=81.3
Q ss_pred CccEEEEcCChHHHHHHHHHHHc--CCcEEEEcccCCCCCCCCCcc-eeccChhHHHHHHHHhcCCchhhhccCcceeec
Q 014324 6 KGKAVIVGGSIAGISCAHALLRA--GWDVVVLEKAGGPPTGSPTGA-GLGLDRPAQRIIQSWLNGRPHLLHLATVPLTID 82 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~--G~~v~v~E~~~~~~~~~~~~~-~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 82 (426)
..+|+|||||.+|+-+|..|++. |.+|+++++...+........ .....|...+.+..+.. ........
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~----~~~~~~~~---- 298 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREH----AERERLLR---- 298 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCH----HHHHHHHH----
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCH----HHHHHHHH----
Confidence 46899999999999999999999 899999999987532110000 01122332222222211 00000000
Q ss_pred ccccccccccccccc-ccCCCcchhccHHHHHHHHHhcC--CCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEE
Q 014324 83 QNQATDNAKVTRTLA-RDDNFNFRAAHWADLHGLLYNAL--PPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEI 158 (426)
Q Consensus 83 ~~~~~~~~~~~~~~~-~~~~~~~~~~~r~~l~~~L~~~~--~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~ 158 (426)
.... .........+. ...+.+..+.+ ..++ ++.+++|++++.++ ..+.+++++..+|+..++
T Consensus 299 -----------~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~--~~~~v~~~~~~~g~~~~~ 364 (463)
T 3s5w_A 299 -----------EYHNTNYSVVDTDLIE-RIYGVFYRQKVSGIPRHAFRCMTTVERATATA--QGIELALRDAGSGELSVE 364 (463)
T ss_dssp -----------HTGGGTSSCBCHHHHH-HHHHHHHHHHHHCCCCSEEETTEEEEEEEEET--TEEEEEEEETTTCCEEEE
T ss_pred -----------HhhccCCCcCCHHHHH-HHHHHHHHHHhcCCCCeEEEeCCEEEEEEecC--CEEEEEEEEcCCCCeEEE
Confidence 0000 00000000000 11111122222 2477 99999999998643 457777665668887789
Q ss_pred eecEEEeccCCchh
Q 014324 159 KGNLLVAADGCLSS 172 (426)
Q Consensus 159 ~~d~vI~AdG~~S~ 172 (426)
.+|+||.|+|....
T Consensus 365 ~~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 365 TYDAVILATGYERQ 378 (463)
T ss_dssp EESEEEECCCEECC
T ss_pred ECCEEEEeeCCCCC
Confidence 99999999997643
No 180
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.13 E-value=3.7e-06 Score=82.74 Aligned_cols=39 Identities=41% Similarity=0.553 Sum_probs=36.0
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPT 43 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~ 43 (426)
..+||+|||||++||++|..|+++|++|+|+|+++.++.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg 70 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGG 70 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCC
Confidence 357999999999999999999999999999999988764
No 181
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.12 E-value=6.7e-06 Score=79.77 Aligned_cols=101 Identities=13% Similarity=0.100 Sum_probs=71.3
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.. .+.+..
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--------~~~~~~---------------------------- 210 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP--------SFDPMI---------------------------- 210 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST--------TSCHHH----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh--------hhhHHH----------------------------
Confidence 35899999999999999999999999999998875321 011100
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
...+.+.|.+ .|+ ++.++++.+++.+++ ..+.++ +.+|+. +++|.||
T Consensus 211 -----------------------~~~l~~~l~~---~Gv~i~~~~~v~~i~~~~~-~~~~v~---~~~g~~--i~~D~vv 258 (450)
T 1ges_A 211 -----------------------SETLVEVMNA---EGPQLHTNAIPKAVVKNTD-GSLTLE---LEDGRS--ETVDCLI 258 (450)
T ss_dssp -----------------------HHHHHHHHHH---HSCEEECSCCEEEEEECTT-SCEEEE---ETTSCE--EEESEEE
T ss_pred -----------------------HHHHHHHHHH---CCCEEEeCCEEEEEEEeCC-cEEEEE---ECCCcE--EEcCEEE
Confidence 0122233322 377 999999999985432 235555 567764 8999999
Q ss_pred eccCCchhhh
Q 014324 165 AADGCLSSIR 174 (426)
Q Consensus 165 ~AdG~~S~vR 174 (426)
.|+|..+.+.
T Consensus 259 ~a~G~~p~~~ 268 (450)
T 1ges_A 259 WAIGREPAND 268 (450)
T ss_dssp ECSCEEESCT
T ss_pred ECCCCCcCCC
Confidence 9999887654
No 182
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.12 E-value=1.5e-06 Score=85.51 Aligned_cols=60 Identities=20% Similarity=0.263 Sum_probs=46.8
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCC----------Cccee--ccChhHHHHHHHHhc
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSP----------TGAGL--GLDRPAQRIIQSWLN 66 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~----------~~~~~--~l~~~~~~~l~~~~~ 66 (426)
+||+|||||++||++|..|+++|++|+|+|+++.++.... .|..+ ...+...+.++++|+
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~l~~lgl 111 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNIDGYPYEMGGTWVHWHQSHVWREITRYKM 111 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEETTEEEECSCCCBCTTSHHHHHHHHHTTC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccCCeeecCCCeEecCccHHHHHHHHHcCC
Confidence 7999999999999999999999999999999998764221 11111 134677778888776
No 183
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.12 E-value=1.6e-06 Score=81.75 Aligned_cols=37 Identities=30% Similarity=0.404 Sum_probs=34.5
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPT 43 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~ 43 (426)
+||+|||||++||++|..|+++|++|+|+|+++.++.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG 38 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGG 38 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSG
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCc
Confidence 6999999999999999999999999999999987653
No 184
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.11 E-value=1e-05 Score=79.49 Aligned_cols=36 Identities=17% Similarity=0.284 Sum_probs=33.0
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
++.+|+|||||+||+++|..|++.+++|+|||+++.
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 456899999999999999999999999999999864
No 185
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.10 E-value=1.2e-06 Score=86.00 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=32.3
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
++||+||||||+|+++|..|++.|++|+|+|+..
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 4899999999999999999999999999999964
No 186
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.09 E-value=9.1e-06 Score=79.33 Aligned_cols=104 Identities=16% Similarity=0.184 Sum_probs=71.8
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.. . +.+..
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~-----~---~~~~~---------------------------- 220 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP-----T---MDAEI---------------------------- 220 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST-----T---SCHHH----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc-----c---ccHHH----------------------------
Confidence 35899999999999999999999999999999876421 0 00000
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
...+.+.|.+ .|+ ++.++++.+++. ++..+.+++.+..+|+..++.+|.||
T Consensus 221 -----------------------~~~l~~~l~~---~gv~i~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~~~~D~vv 272 (470)
T 1dxl_A 221 -----------------------RKQFQRSLEK---QGMKFKLKTKVVGVDT--SGDGVKLTVEPSAGGEQTIIEADVVL 272 (470)
T ss_dssp -----------------------HHHHHHHHHH---SSCCEECSEEEEEEEC--SSSSEEEEEEESSSCCCEEEEESEEE
T ss_pred -----------------------HHHHHHHHHH---cCCEEEeCCEEEEEEE--cCCeEEEEEEecCCCcceEEECCEEE
Confidence 0122233322 477 999999999984 33345555432225644468999999
Q ss_pred eccCCchhh
Q 014324 165 AADGCLSSI 173 (426)
Q Consensus 165 ~AdG~~S~v 173 (426)
.|.|..+.+
T Consensus 273 ~a~G~~p~~ 281 (470)
T 1dxl_A 273 VSAGRTPFT 281 (470)
T ss_dssp CCCCEEECC
T ss_pred ECCCCCcCC
Confidence 999987654
No 187
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.08 E-value=1.6e-05 Score=78.11 Aligned_cols=104 Identities=21% Similarity=0.269 Sum_probs=72.4
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||||++|+-+|..|++.|.+|+++|+.+.+.. . +.+..
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------~--~d~~~---------------------------- 241 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG------G--MDGEV---------------------------- 241 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS------S--SCHHH----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc------c--CCHHH----------------------------
Confidence 35799999999999999999999999999998876421 0 11000
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
...+.+.|. +.|+ ++.++++.+++.+++ .+.+++.+..+|+..++.+|.||
T Consensus 242 -----------------------~~~l~~~l~---~~gV~v~~~~~v~~i~~~~~--~~~v~~~~~~~g~~~~i~~D~Vi 293 (491)
T 3urh_A 242 -----------------------AKQLQRMLT---KQGIDFKLGAKVTGAVKSGD--GAKVTFEPVKGGEATTLDAEVVL 293 (491)
T ss_dssp -----------------------HHHHHHHHH---HTTCEEECSEEEEEEEEETT--EEEEEEEETTSCCCEEEEESEEE
T ss_pred -----------------------HHHHHHHHH---hCCCEEEECCeEEEEEEeCC--EEEEEEEecCCCceEEEEcCEEE
Confidence 012222232 2477 999999999986443 55555443334655569999999
Q ss_pred eccCCchhh
Q 014324 165 AADGCLSSI 173 (426)
Q Consensus 165 ~AdG~~S~v 173 (426)
.|.|.....
T Consensus 294 ~a~G~~p~~ 302 (491)
T 3urh_A 294 IATGRKPST 302 (491)
T ss_dssp ECCCCEECC
T ss_pred EeeCCccCC
Confidence 999987554
No 188
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.08 E-value=2.8e-06 Score=82.36 Aligned_cols=38 Identities=21% Similarity=0.293 Sum_probs=34.9
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPP 42 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~ 42 (426)
..+||+|||||||||++|..|++.|++|+|||+.+.++
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~G 158 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMG 158 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCC
Confidence 45799999999999999999999999999999998753
No 189
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.06 E-value=1.7e-05 Score=76.79 Aligned_cols=99 Identities=22% Similarity=0.304 Sum_probs=68.8
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeeccc
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQN 84 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 84 (426)
...+|+|||||++|+.+|..|++.|.+|+|+|+.+.+.. .. +.
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----~~--~~------------------------------ 190 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLG-----VY--LD------------------------------ 190 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT-----TT--CC------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccc-----cc--CC------------------------------
Confidence 457899999999999999999999999999999876421 00 00
Q ss_pred cccccccccccccccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecE
Q 014324 85 QATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNL 162 (426)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~ 162 (426)
..+.+.+.+.++ .|+ +++++++.+++. ++..+.++ . +|. ++++|.
T Consensus 191 -------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~~~v~~v~---~-~~~--~i~~d~ 237 (447)
T 1nhp_A 191 -------------------------KEFTDVLTEEMEANNITIATGETVERYEG--DGRVQKVV---T-DKN--AYDADL 237 (447)
T ss_dssp -------------------------HHHHHHHHHHHHTTTEEEEESCCEEEEEC--SSBCCEEE---E-SSC--EEECSE
T ss_pred -------------------------HHHHHHHHHHHHhCCCEEEcCCEEEEEEc--cCcEEEEE---E-CCC--EEECCE
Confidence 112222333332 488 999999999874 32222333 2 444 389999
Q ss_pred EEeccCCchhh
Q 014324 163 LVAADGCLSSI 173 (426)
Q Consensus 163 vI~AdG~~S~v 173 (426)
||.|+|..+.+
T Consensus 238 vi~a~G~~p~~ 248 (447)
T 1nhp_A 238 VVVAVGVRPNT 248 (447)
T ss_dssp EEECSCEEESC
T ss_pred EEECcCCCCCh
Confidence 99999987653
No 190
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.04 E-value=1.7e-05 Score=77.23 Aligned_cols=100 Identities=17% Similarity=0.055 Sum_probs=71.1
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.. . +.+...
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~------~--~~~~~~--------------------------- 210 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF------Q--FDPLLS--------------------------- 210 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST------T--SCHHHH---------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc------c--cCHHHH---------------------------
Confidence 35899999999999999999999999999998876321 0 111000
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
..+.+.|. +.|+ ++.++++.+++.+++ .+.++ +.+|+. ++++|.||
T Consensus 211 ------------------------~~l~~~l~---~~gv~i~~~~~v~~i~~~~~--~~~v~---~~~G~~-~i~~D~vv 257 (463)
T 2r9z_A 211 ------------------------ATLAENMH---AQGIETHLEFAVAALERDAQ--GTTLV---AQDGTR-LEGFDSVI 257 (463)
T ss_dssp ------------------------HHHHHHHH---HTTCEEESSCCEEEEEEETT--EEEEE---ETTCCE-EEEESEEE
T ss_pred ------------------------HHHHHHHH---HCCCEEEeCCEEEEEEEeCC--eEEEE---EeCCcE-EEEcCEEE
Confidence 11222232 2477 999999999985433 35555 567873 48999999
Q ss_pred eccCCchhh
Q 014324 165 AADGCLSSI 173 (426)
Q Consensus 165 ~AdG~~S~v 173 (426)
.|+|..+.+
T Consensus 258 ~a~G~~p~~ 266 (463)
T 2r9z_A 258 WAVGRAPNT 266 (463)
T ss_dssp ECSCEEESC
T ss_pred ECCCCCcCC
Confidence 999987655
No 191
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.03 E-value=2.8e-05 Score=76.31 Aligned_cols=102 Identities=18% Similarity=0.135 Sum_probs=71.2
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||||++|+-+|..|++.|.+|+++|+.+.+.. . +.+..
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~------~--~d~~~---------------------------- 217 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVAN------L--QDEEM---------------------------- 217 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTT------C--CCHHH----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc------c--CCHHH----------------------------
Confidence 35899999999999999999999999999999887421 0 00000
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
...+.+.|.+ . + ++.++++..++.+++ .+.+++. ..+|+..++.+|.||
T Consensus 218 -----------------------~~~l~~~l~~---~-V~i~~~~~v~~i~~~~~--~v~v~~~-~~~G~~~~i~~D~Vi 267 (492)
T 3ic9_A 218 -----------------------KRYAEKTFNE---E-FYFDAKARVISTIEKED--AVEVIYF-DKSGQKTTESFQYVL 267 (492)
T ss_dssp -----------------------HHHHHHHHHT---T-SEEETTCEEEEEEECSS--SEEEEEE-CTTCCEEEEEESEEE
T ss_pred -----------------------HHHHHHHHhh---C-cEEEECCEEEEEEEcCC--EEEEEEE-eCCCceEEEECCEEE
Confidence 0122233322 2 6 888999999985433 4555532 146765669999999
Q ss_pred eccCCchhh
Q 014324 165 AADGCLSSI 173 (426)
Q Consensus 165 ~AdG~~S~v 173 (426)
.|.|....+
T Consensus 268 ~a~G~~p~~ 276 (492)
T 3ic9_A 268 AATGRKANV 276 (492)
T ss_dssp ECSCCEESC
T ss_pred EeeCCccCC
Confidence 999987554
No 192
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.01 E-value=4e-06 Score=81.64 Aligned_cols=34 Identities=21% Similarity=0.353 Sum_probs=32.5
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEccc
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKA 38 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~ 38 (426)
.++||+||||||+|+++|..|++.|++|+|||+.
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK 36 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC
Confidence 4689999999999999999999999999999997
No 193
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.01 E-value=4.1e-06 Score=81.01 Aligned_cols=39 Identities=18% Similarity=0.183 Sum_probs=36.1
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPT 43 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~ 43 (426)
..+||+|||+|++|+++|..|+++|.+|+|+||++..+.
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg 57 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGG 57 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCC
Confidence 458999999999999999999999999999999987764
No 194
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.01 E-value=5.2e-06 Score=80.06 Aligned_cols=39 Identities=10% Similarity=0.123 Sum_probs=36.0
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPT 43 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~ 43 (426)
..+||+|||||++|+++|..|+++|++|+|+|++..++.
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg 43 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGG 43 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccc
Confidence 458999999999999999999999999999999987764
No 195
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.00 E-value=1e-05 Score=78.67 Aligned_cols=99 Identities=18% Similarity=0.179 Sum_probs=69.1
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.. . +.+..
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------~--~~~~~---------------------------- 214 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP------T--YDSEL---------------------------- 214 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST------T--SCHHH----------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc------c--cCHHH----------------------------
Confidence 35899999999999999999999999999999876421 0 10000
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
...+.+.|.+ .|+ ++.++++.+++ . + .+.++ ..+|+..++.+|.||
T Consensus 215 -----------------------~~~l~~~l~~---~gv~i~~~~~v~~i~--~-~-~v~v~---~~~G~~~~i~~D~vv 261 (458)
T 1lvl_A 215 -----------------------TAPVAESLKK---LGIALHLGHSVEGYE--N-G-CLLAN---DGKGGQLRLEADRVL 261 (458)
T ss_dssp -----------------------HHHHHHHHHH---HTCEEETTCEEEEEE--T-T-EEEEE---CSSSCCCEECCSCEE
T ss_pred -----------------------HHHHHHHHHH---CCCEEEECCEEEEEE--e-C-CEEEE---ECCCceEEEECCEEE
Confidence 0112222322 377 89999999987 3 2 25544 345644458999999
Q ss_pred eccCCchhh
Q 014324 165 AADGCLSSI 173 (426)
Q Consensus 165 ~AdG~~S~v 173 (426)
.|.|..+.+
T Consensus 262 ~a~G~~p~~ 270 (458)
T 1lvl_A 262 VAVGRRPRT 270 (458)
T ss_dssp ECCCEEECC
T ss_pred ECcCCCcCC
Confidence 999987654
No 196
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.00 E-value=2.2e-05 Score=76.66 Aligned_cols=105 Identities=17% Similarity=0.204 Sum_probs=70.3
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeeccccc
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQA 86 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (426)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.. .. +.+..
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-----~~--~~~~~----------------------------- 222 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGG-----VG--IDMEI----------------------------- 222 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSC-----SS--CCHHH-----------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCC-----cc--cCHHH-----------------------------
Confidence 5899999999999999999999999999999876421 00 00000
Q ss_pred cccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEEe
Q 014324 87 TDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLVA 165 (426)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI~ 165 (426)
...+.+.|. +.|+ +++++++.+++.+++ ..+.+++.+..+++..++++|.||.
T Consensus 223 ----------------------~~~l~~~l~---~~Gv~i~~~~~v~~i~~~~~-~~~~v~~~~~~~~~~~~i~~D~vv~ 276 (474)
T 1zmd_A 223 ----------------------SKNFQRILQ---KQGFKFKLNTKVTGATKKSD-GKIDVSIEAASGGKAEVITCDVLLV 276 (474)
T ss_dssp ----------------------HHHHHHHHH---HTTCEEECSEEEEEEEECTT-SCEEEEEEETTSCCCEEEEESEEEE
T ss_pred ----------------------HHHHHHHHH---HCCCEEEeCceEEEEEEcCC-ceEEEEEEecCCCCceEEEcCEEEE
Confidence 012222232 2478 999999999985432 2255553322233334589999999
Q ss_pred ccCCchhh
Q 014324 166 ADGCLSSI 173 (426)
Q Consensus 166 AdG~~S~v 173 (426)
|.|..+.+
T Consensus 277 a~G~~p~~ 284 (474)
T 1zmd_A 277 CIGRRPFT 284 (474)
T ss_dssp CSCEEECC
T ss_pred CcCCCcCC
Confidence 99987654
No 197
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.99 E-value=3.5e-06 Score=81.80 Aligned_cols=34 Identities=18% Similarity=0.305 Sum_probs=32.4
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEccc
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKA 38 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~ 38 (426)
.++||+||||||+|+++|..|++.|++|+|||+.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK 36 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC
Confidence 4689999999999999999999999999999997
No 198
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.99 E-value=5.8e-06 Score=76.81 Aligned_cols=35 Identities=31% Similarity=0.427 Sum_probs=32.8
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
+||+|||||+||+.+|+.|+++|++|+|+|+++..
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~ 36 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKR 36 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTS
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCc
Confidence 58999999999999999999999999999998743
No 199
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.98 E-value=2.5e-05 Score=76.38 Aligned_cols=102 Identities=14% Similarity=0.110 Sum_probs=71.1
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+.. . +.+...
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~------~--~d~~~~--------------------------- 229 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR------K--FDECIQ--------------------------- 229 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT------T--SCHHHH---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc------c--cCHHHH---------------------------
Confidence 35899999999999999999999999999999876421 0 111000
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
..+.+.|.+ .|+ ++.++++.+++.++++..+.++ +++|+ .++.+|.||
T Consensus 230 ------------------------~~l~~~l~~---~Gv~i~~~~~v~~i~~~~~~~~~~v~---~~~G~-~~i~~D~vv 278 (479)
T 2hqm_A 230 ------------------------NTITDHYVK---EGINVHKLSKIVKVEKNVETDKLKIH---MNDSK-SIDDVDELI 278 (479)
T ss_dssp ------------------------HHHHHHHHH---HTCEEECSCCEEEEEECC-CCCEEEE---ETTSC-EEEEESEEE
T ss_pred ------------------------HHHHHHHHh---CCeEEEeCCEEEEEEEcCCCcEEEEE---ECCCc-EEEEcCEEE
Confidence 122233332 377 9999999999854333235555 56773 348999999
Q ss_pred eccCCchhh
Q 014324 165 AADGCLSSI 173 (426)
Q Consensus 165 ~AdG~~S~v 173 (426)
.|.|..+.+
T Consensus 279 ~a~G~~p~~ 287 (479)
T 2hqm_A 279 WTIGRKSHL 287 (479)
T ss_dssp ECSCEEECC
T ss_pred ECCCCCCcc
Confidence 999987665
No 200
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.97 E-value=5.9e-06 Score=81.74 Aligned_cols=37 Identities=19% Similarity=0.192 Sum_probs=34.4
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
.++||+|||||++|+++|..|++.|++|+|||+.+.+
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~ 78 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFL 78 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 4589999999999999999999999999999998754
No 201
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.97 E-value=3.1e-05 Score=71.21 Aligned_cols=102 Identities=16% Similarity=0.162 Sum_probs=68.7
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.+.. .
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~----------~------------------------------- 183 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA----------E------------------------------- 183 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC----------C-------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc----------C-------------------------------
Confidence 35799999999999999999999999999998765310 0
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcC-CCCe-eEeeeeEEEEEEecCCceEEEEEEeccC-CceEEEeecE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNAL-PPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQT-DEVIEIKGNL 162 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~-g~~~~~~~d~ 162 (426)
..+.+.+.+.+ +.++ +++++++.++..+++ ....+++.+..+ |+..++.+|.
T Consensus 184 ------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~v~~v~~~~~~~~g~~~~i~~D~ 238 (320)
T 1trb_A 184 ------------------------KILIKRLMDKVENGNIILHTNRTLEEVTGDQM-GVTGVRLRDTQNSDNIESLDVAG 238 (320)
T ss_dssp ------------------------HHHHHHHHHHHHTSSEEEECSCEEEEEEECSS-SEEEEEEECCTTCCCCEEEECSE
T ss_pred ------------------------HHHHHHHHHhcccCCeEEEcCceeEEEEcCCC-ceEEEEEEeccCCCceEEEEcCE
Confidence 00111122222 3578 999999999985432 222244322223 5555699999
Q ss_pred EEeccCCchhh
Q 014324 163 LVAADGCLSSI 173 (426)
Q Consensus 163 vI~AdG~~S~v 173 (426)
||.|.|.....
T Consensus 239 vv~a~G~~p~~ 249 (320)
T 1trb_A 239 LFVAIGHSPNT 249 (320)
T ss_dssp EEECSCEEESC
T ss_pred EEEEeCCCCCh
Confidence 99999977543
No 202
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.97 E-value=3.9e-05 Score=74.50 Aligned_cols=102 Identities=22% Similarity=0.232 Sum_probs=70.5
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.. . +.+..
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------~--~~~~~---------------------------- 213 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS------G--FEKQM---------------------------- 213 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST------T--SCHHH----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc------c--cCHHH----------------------------
Confidence 46899999999999999999999999999999876421 0 00000
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
...+.+.|.+ .|+ ++.++++.+++.+++ .+.+++. .+|+..++++|.||
T Consensus 214 -----------------------~~~l~~~l~~---~gv~i~~~~~v~~i~~~~~--~~~v~~~--~~g~~~~~~~D~vv 263 (455)
T 1ebd_A 214 -----------------------AAIIKKRLKK---KGVEVVTNALAKGAEERED--GVTVTYE--ANGETKTIDADYVL 263 (455)
T ss_dssp -----------------------HHHHHHHHHH---TTCEEEESEEEEEEEEETT--EEEEEEE--ETTEEEEEEESEEE
T ss_pred -----------------------HHHHHHHHHH---CCCEEEeCCEEEEEEEeCC--eEEEEEE--eCCceeEEEcCEEE
Confidence 0122233322 477 999999999985433 4555532 23444458999999
Q ss_pred eccCCchhh
Q 014324 165 AADGCLSSI 173 (426)
Q Consensus 165 ~AdG~~S~v 173 (426)
.|.|..+.+
T Consensus 264 ~a~G~~p~~ 272 (455)
T 1ebd_A 264 VTVGRRPNT 272 (455)
T ss_dssp ECSCEEESC
T ss_pred ECcCCCccc
Confidence 999987654
No 203
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.95 E-value=5.9e-06 Score=81.30 Aligned_cols=34 Identities=24% Similarity=0.404 Sum_probs=32.2
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
++||+||||||+|+++|..|++.|++|+|||+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3899999999999999999999999999999984
No 204
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.95 E-value=3e-05 Score=75.44 Aligned_cols=102 Identities=18% Similarity=0.212 Sum_probs=70.5
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.. . +.+...
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-----~---~~~~~~--------------------------- 215 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP-----N---EDADVS--------------------------- 215 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----T---SCHHHH---------------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc-----c---cCHHHH---------------------------
Confidence 35899999999999999999999999999999876421 0 111000
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
..+.+.|.+ .|+ ++.++++.+++.++ ..+.+++. .+|+..++.+|.||
T Consensus 216 ------------------------~~l~~~l~~---~gv~i~~~~~v~~i~~~~--~~~~v~~~--~~g~~~~~~~D~vv 264 (464)
T 2a8x_A 216 ------------------------KEIEKQFKK---LGVTILTATKVESIADGG--SQVTVTVT--KDGVAQELKAEKVL 264 (464)
T ss_dssp ------------------------HHHHHHHHH---HTCEEECSCEEEEEEECS--SCEEEEEE--SSSCEEEEEESEEE
T ss_pred ------------------------HHHHHHHHH---cCCEEEeCcEEEEEEEcC--CeEEEEEE--cCCceEEEEcCEEE
Confidence 112222321 377 99999999998533 23555531 25655568999999
Q ss_pred eccCCchhh
Q 014324 165 AADGCLSSI 173 (426)
Q Consensus 165 ~AdG~~S~v 173 (426)
.|.|....+
T Consensus 265 ~a~G~~p~~ 273 (464)
T 2a8x_A 265 QAIGFAPNV 273 (464)
T ss_dssp ECSCEEECC
T ss_pred ECCCCCccC
Confidence 999987654
No 205
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.93 E-value=7.1e-06 Score=83.98 Aligned_cols=38 Identities=29% Similarity=0.462 Sum_probs=34.8
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPP 42 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~ 42 (426)
.++||+||||||+||++|+.|+++|++|+|||+.+..+
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~G 427 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLG 427 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSC
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 45799999999999999999999999999999988643
No 206
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.93 E-value=3.3e-05 Score=75.24 Aligned_cols=103 Identities=18% Similarity=0.228 Sum_probs=69.4
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+.. . +.+..
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------~--~d~~~---------------------------- 217 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP------T--LDEDV---------------------------- 217 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST------T--SCHHH----------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc------c--CCHHH----------------------------
Confidence 35899999999999999999999999999999876421 0 10000
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHH-HhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLL-YNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLL 163 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L-~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 163 (426)
...+.+.| . +.|+ ++.++++.+++.+++ .+.+++. ..+|+..++++|.|
T Consensus 218 -----------------------~~~l~~~l~~---~~gv~i~~~~~v~~i~~~~~--~~~v~~~-~~~g~~~~i~~D~v 268 (468)
T 2qae_A 218 -----------------------TNALVGALAK---NEKMKFMTSTKVVGGTNNGD--SVSLEVE-GKNGKRETVTCEAL 268 (468)
T ss_dssp -----------------------HHHHHHHHHH---HTCCEEECSCEEEEEEECSS--SEEEEEE-CC---EEEEEESEE
T ss_pred -----------------------HHHHHHHHhh---cCCcEEEeCCEEEEEEEcCC--eEEEEEE-cCCCceEEEECCEE
Confidence 01222323 2 2477 999999999985433 3555432 12565456899999
Q ss_pred EeccCCchhh
Q 014324 164 VAADGCLSSI 173 (426)
Q Consensus 164 I~AdG~~S~v 173 (426)
|.|.|..+..
T Consensus 269 v~a~G~~p~~ 278 (468)
T 2qae_A 269 LVSVGRRPFT 278 (468)
T ss_dssp EECSCEEECC
T ss_pred EECCCcccCC
Confidence 9999987654
No 207
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.91 E-value=2.2e-05 Score=75.11 Aligned_cols=99 Identities=17% Similarity=0.171 Sum_probs=69.8
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||+|+.|+-+|..|++.|.+|+++|+.+.+.. .. +.
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~-----~~--~~------------------------------- 184 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLV-----RV--LG------------------------------- 184 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSH-----HH--HC-------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccch-----hh--cC-------------------------------
Confidence 45899999999999999999999999999999876320 00 00
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLL 163 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 163 (426)
..+.+.+.+.++ .|+ +++++++.+++. ++....++ +++|+. +.||.|
T Consensus 185 ------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~~~v~---~~dg~~--i~aD~V 233 (410)
T 3ef6_A 185 ------------------------RRIGAWLRGLLTELGVQVELGTGVVGFSG--EGQLEQVM---ASDGRS--FVADSA 233 (410)
T ss_dssp ------------------------HHHHHHHHHHHHHHTCEEECSCCEEEEEC--SSSCCEEE---ETTSCE--EECSEE
T ss_pred ------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEec--cCcEEEEE---ECCCCE--EEcCEE
Confidence 111122222222 377 899999999874 33333444 677875 899999
Q ss_pred EeccCCchhh
Q 014324 164 VAADGCLSSI 173 (426)
Q Consensus 164 I~AdG~~S~v 173 (426)
|.|.|..+..
T Consensus 234 v~a~G~~p~~ 243 (410)
T 3ef6_A 234 LICVGAEPAD 243 (410)
T ss_dssp EECSCEEECC
T ss_pred EEeeCCeecH
Confidence 9999987653
No 208
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.90 E-value=6.8e-06 Score=79.91 Aligned_cols=34 Identities=24% Similarity=0.300 Sum_probs=32.1
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcc
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEK 37 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~ 37 (426)
+.++||+||||||+|+++|..|++.|++|+|||+
T Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~ 36 (458)
T 1lvl_A 3 TIQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG 36 (458)
T ss_dssp CEECSEEEECCSHHHHHHHHHHHHHTCCEEEECS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc
Confidence 3468999999999999999999999999999999
No 209
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.89 E-value=3.4e-05 Score=75.51 Aligned_cols=101 Identities=20% Similarity=0.183 Sum_probs=69.3
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.. . +.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~-----~---~~------------------------------- 225 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ-----G---AD------------------------------- 225 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST-----T---SC-------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc-----c---cC-------------------------------
Confidence 45899999999999999999999999999999876421 0 00
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccC-CceEEEeecE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQT-DEVIEIKGNL 162 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~-g~~~~~~~d~ 162 (426)
..+.+.+.+.++ .|+ ++.++++.+++.++ ..+.+++.+..+ |+. +.+|.
T Consensus 226 ------------------------~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~--~~~~v~~~~~~~~g~~--~~~D~ 277 (482)
T 1ojt_A 226 ------------------------RDLVKVWQKQNEYRFDNIMVNTKTVAVEPKE--DGVYVTFEGANAPKEP--QRYDA 277 (482)
T ss_dssp ------------------------HHHHHHHHHHHGGGEEEEECSCEEEEEEEET--TEEEEEEESSSCCSSC--EEESC
T ss_pred ------------------------HHHHHHHHHHHHhcCCEEEECCEEEEEEEcC--CeEEEEEeccCCCceE--EEcCE
Confidence 011112223222 478 99999999998543 345555321011 444 78999
Q ss_pred EEeccCCchhh
Q 014324 163 LVAADGCLSSI 173 (426)
Q Consensus 163 vI~AdG~~S~v 173 (426)
||.|.|..+.+
T Consensus 278 vv~a~G~~p~~ 288 (482)
T 1ojt_A 278 VLVAAGRAPNG 288 (482)
T ss_dssp EEECCCEEECG
T ss_pred EEECcCCCcCC
Confidence 99999987654
No 210
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.89 E-value=6.9e-06 Score=79.68 Aligned_cols=38 Identities=29% Similarity=0.271 Sum_probs=34.1
Q ss_pred CCCccEEEEcCChHHHHHHHHHHH-c------CCcEEEEcccCCC
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLR-A------GWDVVVLEKAGGP 41 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~-~------G~~v~v~E~~~~~ 41 (426)
|..+||+||||||||+++|..|++ . |++|+|||+.+.+
T Consensus 1 m~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 1 MRPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 346899999999999999999999 7 9999999998764
No 211
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.87 E-value=9.3e-06 Score=79.63 Aligned_cols=33 Identities=15% Similarity=0.230 Sum_probs=31.1
Q ss_pred CCccEEEEcCChHHHHHHHHHHH-cCCcEEEEcc
Q 014324 5 EKGKAVIVGGSIAGISCAHALLR-AGWDVVVLEK 37 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~-~G~~v~v~E~ 37 (426)
.++||+||||||+|+++|+.|++ .|++|+|||+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 46899999999999999999999 9999999994
No 212
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.85 E-value=7.1e-05 Score=73.54 Aligned_cols=101 Identities=12% Similarity=0.119 Sum_probs=71.1
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+.. . +.+...
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~------~--~d~~~~--------------------------- 220 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR------K--FDESVI--------------------------- 220 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT------T--SCHHHH---------------------------
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc------c--cchhhH---------------------------
Confidence 35899999999999999999999999999999876421 0 111000
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
..+.+.|.+ .|+ ++.++++.+++.+++ ..+.++ +.+|+. ++.+|.||
T Consensus 221 ------------------------~~l~~~l~~---~gv~i~~~~~v~~i~~~~~-~~~~v~---~~~g~~-~~~~D~vi 268 (500)
T 1onf_A 221 ------------------------NVLENDMKK---NNINIVTFADVVEIKKVSD-KNLSIH---LSDGRI-YEHFDHVI 268 (500)
T ss_dssp ------------------------HHHHHHHHH---TTCEEECSCCEEEEEESST-TCEEEE---ETTSCE-EEEESEEE
T ss_pred ------------------------HHHHHHHHh---CCCEEEECCEEEEEEEcCC-ceEEEE---ECCCcE-EEECCEEE
Confidence 112222322 477 999999999985332 235555 567764 48999999
Q ss_pred eccCCchhh
Q 014324 165 AADGCLSSI 173 (426)
Q Consensus 165 ~AdG~~S~v 173 (426)
.|.|....+
T Consensus 269 ~a~G~~p~~ 277 (500)
T 1onf_A 269 YCVGRSPDT 277 (500)
T ss_dssp ECCCBCCTT
T ss_pred ECCCCCcCC
Confidence 999987665
No 213
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.84 E-value=5.9e-05 Score=72.25 Aligned_cols=100 Identities=18% Similarity=0.246 Sum_probs=70.6
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||+|+.|+-+|..|++.|.+|+++|+.+.+.. .. +.
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~-----~~--~~------------------------------- 193 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLA-----RV--AG------------------------------- 193 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT-----TT--SC-------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhh-----hh--cC-------------------------------
Confidence 45799999999999999999999999999999876421 00 00
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLL 163 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 163 (426)
..+.+.+.+.++ .|+ +++++++.+++.+ ++....|+ +++|+. +.||.|
T Consensus 194 ------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~v~---l~dG~~--i~aD~V 243 (415)
T 3lxd_A 194 ------------------------EALSEFYQAEHRAHGVDLRTGAAMDCIEGD-GTKVTGVR---MQDGSV--IPADIV 243 (415)
T ss_dssp ------------------------HHHHHHHHHHHHHTTCEEEETCCEEEEEES-SSBEEEEE---ESSSCE--EECSEE
T ss_pred ------------------------HHHHHHHHHHHHhCCCEEEECCEEEEEEec-CCcEEEEE---eCCCCE--EEcCEE
Confidence 111122222222 477 9999999999853 22222455 677875 899999
Q ss_pred EeccCCchhh
Q 014324 164 VAADGCLSSI 173 (426)
Q Consensus 164 I~AdG~~S~v 173 (426)
|.|.|..+..
T Consensus 244 v~a~G~~p~~ 253 (415)
T 3lxd_A 244 IVGIGIVPCV 253 (415)
T ss_dssp EECSCCEESC
T ss_pred EECCCCccCh
Confidence 9999987654
No 214
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.84 E-value=1.4e-05 Score=82.31 Aligned_cols=38 Identities=26% Similarity=0.424 Sum_probs=34.8
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPP 42 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~ 42 (426)
..+||+||||||||+++|..|+++|++|+|||+.+.++
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~G 425 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIG 425 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcC
Confidence 35799999999999999999999999999999988753
No 215
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.83 E-value=1.3e-05 Score=79.75 Aligned_cols=38 Identities=34% Similarity=0.458 Sum_probs=34.6
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
...+||+|||||++|+++|..|++.|++|+|+|+....
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 45799999999999999999999999999999998754
No 216
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.82 E-value=1.3e-05 Score=78.34 Aligned_cols=39 Identities=31% Similarity=0.486 Sum_probs=34.7
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCC-cEEEEcccCCCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGW-DVVVLEKAGGPPT 43 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~~~~~ 43 (426)
..+||+|||||++||++|+.|++.|+ +|+|+|+.+.++.
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg 42 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGG 42 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCC
Confidence 45899999999999999999999999 8999999987754
No 217
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.82 E-value=1.2e-05 Score=78.81 Aligned_cols=32 Identities=19% Similarity=0.280 Sum_probs=30.7
Q ss_pred CccEEEEcCChHHHHHHHHHHH-cCCcEEEEcc
Q 014324 6 KGKAVIVGGSIAGISCAHALLR-AGWDVVVLEK 37 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~-~G~~v~v~E~ 37 (426)
++||+||||||+|+++|+.|++ .|++|+|||+
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 5899999999999999999999 9999999994
No 218
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.82 E-value=7.7e-05 Score=71.82 Aligned_cols=101 Identities=21% Similarity=0.307 Sum_probs=68.3
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+.. .. +.+...
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~-----~~--~~~~~~--------------------------- 194 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLE-----RV--TAPPVS--------------------------- 194 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT-----TT--SCHHHH---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc-----ch--hhHHHH---------------------------
Confidence 45899999999999999999999999999999776421 00 000000
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceE-EEEEEeccCCceEEEeecEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTV-TVKAKVLQTDEVIEIKGNLL 163 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v-~v~~~~~~~g~~~~~~~d~v 163 (426)
..+.+.|.+ .|+ ++.++++.+++...++..+ .++ +++|+. +.+|.|
T Consensus 195 ------------------------~~l~~~l~~---~GV~i~~~~~v~~i~~~~~~~~v~~v~---~~~G~~--i~~D~V 242 (431)
T 1q1r_A 195 ------------------------AFYEHLHRE---AGVDIRTGTQVCGFEMSTDQQKVTAVL---CEDGTR--LPADLV 242 (431)
T ss_dssp ------------------------HHHHHHHHH---HTCEEECSCCEEEEEECTTTCCEEEEE---ETTSCE--EECSEE
T ss_pred ------------------------HHHHHHHHh---CCeEEEeCCEEEEEEeccCCCcEEEEE---eCCCCE--EEcCEE
Confidence 112222221 377 8999999998742022233 444 567764 899999
Q ss_pred EeccCCchh
Q 014324 164 VAADGCLSS 172 (426)
Q Consensus 164 I~AdG~~S~ 172 (426)
|.|.|..+.
T Consensus 243 v~a~G~~p~ 251 (431)
T 1q1r_A 243 IAGIGLIPN 251 (431)
T ss_dssp EECCCEEEC
T ss_pred EECCCCCcC
Confidence 999998654
No 219
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.81 E-value=0.00023 Score=65.07 Aligned_cols=98 Identities=16% Similarity=0.055 Sum_probs=68.6
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.+.. .
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~----------~------------------------------- 181 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRC----------A------------------------------- 181 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCCS----------C-------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccCC----------C-------------------------------
Confidence 35899999999999999999999999999998765310 0
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceE-EEEEEeccCCceEEEeecEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTV-TVKAKVLQTDEVIEIKGNLL 163 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v-~v~~~~~~~g~~~~~~~d~v 163 (426)
..+.+.|.+ ..++ ++.++++.++..+++ .+ .+++.+..+|+..++.+|.|
T Consensus 182 ------------------------~~~~~~l~~--~~gv~v~~~~~v~~i~~~~~--~v~~v~~~~~~~g~~~~i~~D~v 233 (311)
T 2q0l_A 182 ------------------------PITLEHAKN--NDKIEFLTPYVVEEIKGDAS--GVSSLSIKNTATNEKRELVVPGF 233 (311)
T ss_dssp ------------------------HHHHHHHHT--CTTEEEETTEEEEEEEEETT--EEEEEEEEETTTCCEEEEECSEE
T ss_pred ------------------------HHHHHHHhh--CCCeEEEeCCEEEEEECCCC--cEeEEEEEecCCCceEEEecCEE
Confidence 001111221 2478 889999999885422 22 34433334777667999999
Q ss_pred EeccCCchh
Q 014324 164 VAADGCLSS 172 (426)
Q Consensus 164 I~AdG~~S~ 172 (426)
|.|.|....
T Consensus 234 i~a~G~~p~ 242 (311)
T 2q0l_A 234 FIFVGYDVN 242 (311)
T ss_dssp EECSCEEEC
T ss_pred EEEecCccC
Confidence 999997643
No 220
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.81 E-value=5.2e-05 Score=72.36 Aligned_cols=100 Identities=17% Similarity=0.255 Sum_probs=70.2
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||+|+.|+-+|..|.+.|.+|+++|+.+.+.. .. +.
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~-----~~--~~------------------------------- 183 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMA-----RV--VT------------------------------- 183 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT-----TT--SC-------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchh-----hc--cC-------------------------------
Confidence 35799999999999999999999999999999876421 00 00
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLL 163 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 163 (426)
..+.+.+.+.++ .|+ +++++++.+++.++ +....|+ +++|++ +.||.|
T Consensus 184 ------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v~~V~---~~dG~~--i~aD~V 233 (404)
T 3fg2_P 184 ------------------------PEISSYFHDRHSGAGIRMHYGVRATEIAAEG-DRVTGVV---LSDGNT--LPCDLV 233 (404)
T ss_dssp ------------------------HHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEE---ETTSCE--EECSEE
T ss_pred ------------------------HHHHHHHHHHHHhCCcEEEECCEEEEEEecC-CcEEEEE---eCCCCE--EEcCEE
Confidence 111122223222 477 99999999998543 2222355 678875 899999
Q ss_pred EeccCCchhh
Q 014324 164 VAADGCLSSI 173 (426)
Q Consensus 164 I~AdG~~S~v 173 (426)
|.|.|..+..
T Consensus 234 v~a~G~~p~~ 243 (404)
T 3fg2_P 234 VVGVGVIPNV 243 (404)
T ss_dssp EECCCEEECC
T ss_pred EECcCCccCH
Confidence 9999986543
No 221
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.81 E-value=0.00012 Score=71.46 Aligned_cols=105 Identities=17% Similarity=0.111 Sum_probs=70.7
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeeccccc
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQA 86 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (426)
.+|+|||||+.|+-+|..|++.|.+|+++++.+.+.. . +.+. +
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------~--~d~~---------------~-------------- 230 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR------S--FDSM---------------I-------------- 230 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT------T--SCHH---------------H--------------
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccc------c--cCHH---------------H--------------
Confidence 5899999999999999999999999999998776421 0 0000 0
Q ss_pred cccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCce--EEEeecEE
Q 014324 87 TDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEV--IEIKGNLL 163 (426)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~--~~~~~d~v 163 (426)
...+.+.|. +.|+ ++.++++.+++..+++..+.+++.+..+|+. .++.+|.|
T Consensus 231 ----------------------~~~~~~~l~---~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~v 285 (478)
T 3dk9_A 231 ----------------------STNCTEELE---NAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCL 285 (478)
T ss_dssp ----------------------HHHHHHHHH---HTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEE
T ss_pred ----------------------HHHHHHHHH---HCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEE
Confidence 012223332 2477 9999999999864443245555322222432 46899999
Q ss_pred EeccCCchhh
Q 014324 164 VAADGCLSSI 173 (426)
Q Consensus 164 I~AdG~~S~v 173 (426)
|.|.|.....
T Consensus 286 i~a~G~~p~~ 295 (478)
T 3dk9_A 286 LWAIGRVPNT 295 (478)
T ss_dssp EECSCEEESC
T ss_pred EEeeccccCC
Confidence 9999986544
No 222
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.80 E-value=1.4e-05 Score=81.28 Aligned_cols=39 Identities=31% Similarity=0.543 Sum_probs=35.7
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPT 43 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~ 43 (426)
..+||+|||||++||++|..|++.|++|+|+|+.+.++.
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 144 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBT
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 457999999999999999999999999999999987753
No 223
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.80 E-value=1.7e-05 Score=82.34 Aligned_cols=39 Identities=31% Similarity=0.543 Sum_probs=35.8
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPT 43 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~ 43 (426)
..++|+|||||++||++|+.|+++|++|+|||+...++.
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG 315 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 315 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCC
Confidence 357999999999999999999999999999999988753
No 224
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.79 E-value=7.8e-05 Score=73.66 Aligned_cols=102 Identities=15% Similarity=0.144 Sum_probs=71.4
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeeccccc
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQA 86 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (426)
.+|+|||||..|+-+|..|++.|.+|+++|+.+.+.. . +.+. +
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~-----~---~~~~---------------~-------------- 257 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKL-----I---KDNE---------------T-------------- 257 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT-----C---CSHH---------------H--------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccc-----c---ccHH---------------H--------------
Confidence 6899999999999999999999999999999876421 0 0000 0
Q ss_pred cccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCce--EEEEEEeccCCceEEEeecEE
Q 014324 87 TDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTT--VTVKAKVLQTDEVIEIKGNLL 163 (426)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~--v~v~~~~~~~g~~~~~~~d~v 163 (426)
...+.+.|. +.|+ ++.+++|.+++.++++.. +.|+ +.+|+ .++++|.|
T Consensus 258 ----------------------~~~l~~~l~---~~GV~i~~~~~V~~i~~~~~~~v~~~~v~---~~~G~-~~i~aD~V 308 (523)
T 1mo9_A 258 ----------------------RAYVLDRMK---EQGMEIISGSNVTRIEEDANGRVQAVVAM---TPNGE-MRIETDFV 308 (523)
T ss_dssp ----------------------HHHHHHHHH---HTTCEEESSCEEEEEEECTTSBEEEEEEE---ETTEE-EEEECSCE
T ss_pred ----------------------HHHHHHHHH---hCCcEEEECCEEEEEEEcCCCceEEEEEE---ECCCc-EEEEcCEE
Confidence 022223332 2478 999999999985433311 4555 56675 24899999
Q ss_pred EeccCCchhhh
Q 014324 164 VAADGCLSSIR 174 (426)
Q Consensus 164 I~AdG~~S~vR 174 (426)
|.|.|..+...
T Consensus 309 v~A~G~~p~~~ 319 (523)
T 1mo9_A 309 FLGLGEQPRSA 319 (523)
T ss_dssp EECCCCEECCH
T ss_pred EECcCCccCCc
Confidence 99999887653
No 225
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.79 E-value=0.00014 Score=71.02 Aligned_cols=104 Identities=25% Similarity=0.255 Sum_probs=70.4
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||||+.|+-+|..|++.|.+|+++++..... . +.+..
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~-------~--~d~~~---------------------------- 229 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLR-------G--FDQQM---------------------------- 229 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSST-------T--SCHHH----------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCc-------c--cCHHH----------------------------
Confidence 3579999999999999999999999999998742210 0 00000
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
...+.+.|. +.|+ ++.++++.+++..++ ..+.+++.+..+|+..++.+|.||
T Consensus 230 -----------------------~~~l~~~l~---~~Gv~i~~~~~v~~i~~~~~-~~~~v~~~~~~~~~~~~~~~D~vi 282 (483)
T 3dgh_A 230 -----------------------AELVAASME---ERGIPFLRKTVPLSVEKQDD-GKLLVKYKNVETGEESEDVYDTVL 282 (483)
T ss_dssp -----------------------HHHHHHHHH---HTTCCEEETEEEEEEEECTT-SCEEEEEEETTTCCEEEEEESEEE
T ss_pred -----------------------HHHHHHHHH---hCCCEEEeCCEEEEEEEcCC-CcEEEEEecCCCCceeEEEcCEEE
Confidence 011222232 2477 999999999986433 345566544444556679999999
Q ss_pred eccCCchhh
Q 014324 165 AADGCLSSI 173 (426)
Q Consensus 165 ~AdG~~S~v 173 (426)
.|.|.....
T Consensus 283 ~a~G~~p~~ 291 (483)
T 3dgh_A 283 WAIGRKGLV 291 (483)
T ss_dssp ECSCEEECC
T ss_pred ECcccccCc
Confidence 999986543
No 226
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.79 E-value=0.00021 Score=65.21 Aligned_cols=99 Identities=17% Similarity=0.142 Sum_probs=69.0
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.+. ..
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~----------~~------------------------------- 182 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK----------AD------------------------------- 182 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC----------SC-------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC----------cc-------------------------------
Confidence 3579999999999999999999999999999876531 00
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
..+.+.|.+ ..++ ++.++++.++..++ +....+++.+..+|+..++.+|.||
T Consensus 183 ------------------------~~~~~~l~~--~~gv~v~~~~~v~~i~~~~-~~v~~v~~~~~~~g~~~~i~~D~vi 235 (310)
T 1fl2_A 183 ------------------------QVLQDKLRS--LKNVDIILNAQTTEVKGDG-SKVVGLEYRDRVSGDIHNIELAGIF 235 (310)
T ss_dssp ------------------------HHHHHHHHT--CTTEEEESSEEEEEEEESS-SSEEEEEEEETTTCCEEEEECSEEE
T ss_pred ------------------------HHHHHHHhh--CCCeEEecCCceEEEEcCC-CcEEEEEEEECCCCcEEEEEcCEEE
Confidence 011122221 1477 89999999998432 2222455444456776679999999
Q ss_pred eccCCchh
Q 014324 165 AADGCLSS 172 (426)
Q Consensus 165 ~AdG~~S~ 172 (426)
.|.|....
T Consensus 236 ~a~G~~p~ 243 (310)
T 1fl2_A 236 VQIGLLPN 243 (310)
T ss_dssp ECSCEEES
T ss_pred EeeCCccC
Confidence 99997643
No 227
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.79 E-value=0.00018 Score=70.42 Aligned_cols=104 Identities=18% Similarity=0.170 Sum_probs=70.3
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||||+.|+-+|..|++.|.+|+++++..... . +.+..
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~-------~--~d~~~---------------------------- 227 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLR-------G--FDQQM---------------------------- 227 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST-------T--SCHHH----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcccc-------c--CCHHH----------------------------
Confidence 3579999999999999999999999999999753211 0 00000
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
...+.+.|. +.|+ ++.++++.+++..+ +..+.+++.+..+|+..++.+|.||
T Consensus 228 -----------------------~~~l~~~l~---~~gv~~~~~~~v~~i~~~~-~~~~~v~~~~~~~g~~~~~~~D~vi 280 (488)
T 3dgz_A 228 -----------------------SSLVTEHME---SHGTQFLKGCVPSHIKKLP-TNQLQVTWEDHASGKEDTGTFDTVL 280 (488)
T ss_dssp -----------------------HHHHHHHHH---HTTCEEEETEEEEEEEECT-TSCEEEEEEETTTTEEEEEEESEEE
T ss_pred -----------------------HHHHHHHHH---HCCCEEEeCCEEEEEEEcC-CCcEEEEEEeCCCCeeEEEECCEEE
Confidence 011222232 2477 99999999998533 3345555444444665568999999
Q ss_pred eccCCchhh
Q 014324 165 AADGCLSSI 173 (426)
Q Consensus 165 ~AdG~~S~v 173 (426)
.|.|.....
T Consensus 281 ~a~G~~p~~ 289 (488)
T 3dgz_A 281 WAIGRVPET 289 (488)
T ss_dssp ECSCEEESC
T ss_pred EcccCCccc
Confidence 999986544
No 228
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.78 E-value=1.6e-05 Score=75.30 Aligned_cols=35 Identities=20% Similarity=0.351 Sum_probs=31.1
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcC--CcEEEEcccC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAG--WDVVVLEKAG 39 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G--~~v~v~E~~~ 39 (426)
.++||+||||||+|+++|..|++.| .+|+|+|+..
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 3589999999999999999999999 5689999875
No 229
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.76 E-value=7.9e-05 Score=73.21 Aligned_cols=99 Identities=15% Similarity=0.191 Sum_probs=70.5
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+.. . +.+..
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-----~---~d~~~---------------------------- 225 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLP-----Y---EDADA---------------------------- 225 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSC-----C---SSHHH----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc-----c---cCHHH----------------------------
Confidence 35899999999999999999999999999998876421 0 11100
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
...+.+.|. +.|+ ++.+++|.+++.++ ..+.++ +.+|++ +++|.||
T Consensus 226 -----------------------~~~l~~~l~---~~GV~i~~~~~V~~i~~~~--~~v~v~---~~~g~~--i~aD~Vv 272 (499)
T 1xdi_A 226 -----------------------ALVLEESFA---ERGVRLFKNARAASVTRTG--AGVLVT---MTDGRT--VEGSHAL 272 (499)
T ss_dssp -----------------------HHHHHHHHH---HTTCEEETTCCEEEEEECS--SSEEEE---ETTSCE--EEESEEE
T ss_pred -----------------------HHHHHHHHH---HCCCEEEeCCEEEEEEEeC--CEEEEE---ECCCcE--EEcCEEE
Confidence 012222232 2477 99999999998533 245555 556654 8999999
Q ss_pred eccCCchhh
Q 014324 165 AADGCLSSI 173 (426)
Q Consensus 165 ~AdG~~S~v 173 (426)
.|.|..+.+
T Consensus 273 ~a~G~~p~~ 281 (499)
T 1xdi_A 273 MTIGSVPNT 281 (499)
T ss_dssp ECCCEEECC
T ss_pred ECCCCCcCC
Confidence 999988654
No 230
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.76 E-value=0.00016 Score=66.75 Aligned_cols=98 Identities=16% Similarity=0.101 Sum_probs=69.8
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.+..
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------------------------------------------ 210 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------------------------------------------ 210 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC------------------------------------------
Confidence 45799999999999999999999999999998775310
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
. ..+.+.|.+ ..|+ ++.++++.+++.+. +....+++.+..+|+..++.+|.||
T Consensus 211 ---~--------------------~~~~~~l~~--~~gv~i~~~~~v~~i~~~~-~~~~~v~~~~~~~g~~~~i~~D~vi 264 (338)
T 3itj_A 211 ---S--------------------TIMQKRAEK--NEKIEILYNTVALEAKGDG-KLLNALRIKNTKKNEETDLPVSGLF 264 (338)
T ss_dssp ---C--------------------HHHHHHHHH--CTTEEEECSEEEEEEEESS-SSEEEEEEEETTTTEEEEEECSEEE
T ss_pred ---C--------------------HHHHHHHHh--cCCeEEeecceeEEEEccc-CcEEEEEEEECCCCceEEEEeCEEE
Confidence 0 111112221 1378 89999999998533 2233355544456666679999999
Q ss_pred eccCCch
Q 014324 165 AADGCLS 171 (426)
Q Consensus 165 ~AdG~~S 171 (426)
.|.|...
T Consensus 265 ~a~G~~p 271 (338)
T 3itj_A 265 YAIGHTP 271 (338)
T ss_dssp ECSCEEE
T ss_pred EEeCCCC
Confidence 9999764
No 231
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.75 E-value=2e-05 Score=80.35 Aligned_cols=37 Identities=22% Similarity=0.323 Sum_probs=34.4
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
..+||+||||||||+++|..|+++|++|+|||+.+.+
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~ 408 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEI 408 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 3579999999999999999999999999999998875
No 232
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.75 E-value=9e-05 Score=70.79 Aligned_cols=95 Identities=17% Similarity=0.181 Sum_probs=67.2
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+.. .. +.+..
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-----~~--~~~~~---------------------------- 189 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMS-----RA--APATL---------------------------- 189 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-----TT--SCHHH----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc-----cc--cCHHH----------------------------
Confidence 46899999999999999999999999999999876421 00 00000
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
...+.+.|. +.|+ ++.++++.+++ ++ .| + +.+|+. +++|.||
T Consensus 190 -----------------------~~~l~~~l~---~~GV~i~~~~~v~~i~--~~--~v--~---~~~g~~--i~~D~vi 232 (408)
T 2gqw_A 190 -----------------------ADFVARYHA---AQGVDLRFERSVTGSV--DG--VV--L---LDDGTR--IAADMVV 232 (408)
T ss_dssp -----------------------HHHHHHHHH---HTTCEEEESCCEEEEE--TT--EE--E---ETTSCE--EECSEEE
T ss_pred -----------------------HHHHHHHHH---HcCcEEEeCCEEEEEE--CC--EE--E---ECCCCE--EEcCEEE
Confidence 012222232 2477 99999999987 22 33 3 567764 8999999
Q ss_pred eccCCchh
Q 014324 165 AADGCLSS 172 (426)
Q Consensus 165 ~AdG~~S~ 172 (426)
.|.|....
T Consensus 233 ~a~G~~p~ 240 (408)
T 2gqw_A 233 VGIGVLAN 240 (408)
T ss_dssp ECSCEEEC
T ss_pred ECcCCCcc
Confidence 99998754
No 233
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.74 E-value=0.0001 Score=72.23 Aligned_cols=100 Identities=17% Similarity=0.105 Sum_probs=71.0
Q ss_pred CccEEEEcCChHHHHHHHHHHHc---CCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeec
Q 014324 6 KGKAVIVGGSIAGISCAHALLRA---GWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTID 82 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~---G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 82 (426)
..+|+|||||+.|+-+|..|++. |.+|+++|+.+.+.. . +.+..
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~------~--~d~~~------------------------- 233 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILR------G--FDSEL------------------------- 233 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSST------T--SCHHH-------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCccc------c--cCHHH-------------------------
Confidence 35899999999999999999999 999999999876421 0 10000
Q ss_pred cccccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeec
Q 014324 83 QNQATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGN 161 (426)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d 161 (426)
...+.+.|. +.|+ +++++++.+++.+++ ..+.++ +.+|+. +++|
T Consensus 234 --------------------------~~~l~~~l~---~~GV~i~~~~~v~~i~~~~~-~~~~v~---~~~G~~--i~~D 278 (490)
T 1fec_A 234 --------------------------RKQLTEQLR---ANGINVRTHENPAKVTKNAD-GTRHVV---FESGAE--ADYD 278 (490)
T ss_dssp --------------------------HHHHHHHHH---HTTEEEEETCCEEEEEECTT-SCEEEE---ETTSCE--EEES
T ss_pred --------------------------HHHHHHHHH---hCCCEEEeCCEEEEEEEcCC-CEEEEE---ECCCcE--EEcC
Confidence 012223332 2488 999999999985432 235555 567764 8999
Q ss_pred EEEeccCCchhh
Q 014324 162 LLVAADGCLSSI 173 (426)
Q Consensus 162 ~vI~AdG~~S~v 173 (426)
.||.|.|..+.+
T Consensus 279 ~vv~a~G~~p~~ 290 (490)
T 1fec_A 279 VVMLAIGRVPRS 290 (490)
T ss_dssp EEEECSCEEESC
T ss_pred EEEEccCCCcCc
Confidence 999999987654
No 234
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.73 E-value=0.00011 Score=72.18 Aligned_cols=99 Identities=13% Similarity=0.193 Sum_probs=70.3
Q ss_pred ccEEEEcCChHHHHHHHHHHHc---CCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecc
Q 014324 7 GKAVIVGGSIAGISCAHALLRA---GWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQ 83 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~---G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 83 (426)
.+|+|||||..|+-+|..|++. |.+|+|+|+.+.+.. . +.+..
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~------~--~d~~~-------------------------- 237 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR------G--FDETI-------------------------- 237 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCT------T--SCHHH--------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccc------c--cCHHH--------------------------
Confidence 5899999999999999999999 999999998876421 0 11000
Q ss_pred ccccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecE
Q 014324 84 NQATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNL 162 (426)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~ 162 (426)
...+.+.|. +.|+ +++++++.+++.+++ ..+.++ +.+|+. +++|.
T Consensus 238 -------------------------~~~l~~~l~---~~GV~i~~~~~v~~i~~~~~-~~~~v~---~~~G~~--i~~D~ 283 (495)
T 2wpf_A 238 -------------------------REEVTKQLT---ANGIEIMTNENPAKVSLNTD-GSKHVT---FESGKT--LDVDV 283 (495)
T ss_dssp -------------------------HHHHHHHHH---HTTCEEEESCCEEEEEECTT-SCEEEE---ETTSCE--EEESE
T ss_pred -------------------------HHHHHHHHH---hCCCEEEeCCEEEEEEEcCC-ceEEEE---ECCCcE--EEcCE
Confidence 012222232 2478 999999999985432 235555 567764 89999
Q ss_pred EEeccCCchhh
Q 014324 163 LVAADGCLSSI 173 (426)
Q Consensus 163 vI~AdG~~S~v 173 (426)
||.|.|....+
T Consensus 284 vv~a~G~~p~~ 294 (495)
T 2wpf_A 284 VMMAIGRIPRT 294 (495)
T ss_dssp EEECSCEEECC
T ss_pred EEECCCCcccc
Confidence 99999987654
No 235
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.72 E-value=0.00014 Score=70.90 Aligned_cols=103 Identities=20% Similarity=0.195 Sum_probs=70.1
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+.+.. . +.+..
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------~--~~~~~---------------------------- 223 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP------A--VDEQV---------------------------- 223 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST------T--SCHHH----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc------c--cCHHH----------------------------
Confidence 35799999999999999999999999999999876321 0 00000
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
...+.+.|. +.|+ ++.++++.+++.+++ .+.+++. ..+| ..++.+|.||
T Consensus 224 -----------------------~~~l~~~l~---~~Gv~v~~~~~v~~i~~~~~--~~~v~~~-~~~g-~~~~~~D~vi 273 (476)
T 3lad_A 224 -----------------------AKEAQKILT---KQGLKILLGARVTGTEVKNK--QVTVKFV-DAEG-EKSQAFDKLI 273 (476)
T ss_dssp -----------------------HHHHHHHHH---HTTEEEEETCEEEEEEECSS--CEEEEEE-SSSE-EEEEEESEEE
T ss_pred -----------------------HHHHHHHHH---hCCCEEEECCEEEEEEEcCC--EEEEEEE-eCCC-cEEEECCEEE
Confidence 012222232 2478 999999999986433 4555432 1233 3458999999
Q ss_pred eccCCchhhh
Q 014324 165 AADGCLSSIR 174 (426)
Q Consensus 165 ~AdG~~S~vR 174 (426)
.|.|......
T Consensus 274 ~a~G~~p~~~ 283 (476)
T 3lad_A 274 VAVGRRPVTT 283 (476)
T ss_dssp ECSCEEECCT
T ss_pred EeeCCcccCC
Confidence 9999876553
No 236
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.71 E-value=2.4e-05 Score=83.46 Aligned_cols=37 Identities=35% Similarity=0.553 Sum_probs=33.8
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCC-cEEEEcccCCCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGW-DVVVLEKAGGPP 42 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~~~~ 42 (426)
.+||+||||||||+++|..|++.|+ +|+|||+.+.++
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~G 224 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVG 224 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCS
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCC
Confidence 5799999999999999999999999 799999987654
No 237
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.71 E-value=0.00014 Score=72.57 Aligned_cols=35 Identities=29% Similarity=0.437 Sum_probs=32.6
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
.+|+|||||++|+-+|..|++.|.+|+++++.+.+
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 186 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQV 186 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCcc
Confidence 48999999999999999999999999999998764
No 238
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.70 E-value=7.7e-05 Score=72.76 Aligned_cols=98 Identities=23% Similarity=0.316 Sum_probs=69.7
Q ss_pred CccEEEEcCChHHHHHHHHHHHc-CCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeeccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRA-GWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQN 84 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~-G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 84 (426)
..+|+|||+|++|+-+|..|++. |.+|+++|+.+.+.. .. +.
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~-----~~--~~------------------------------ 201 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMP-----GF--TS------------------------------ 201 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSST-----TT--SC------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccc-----cc--cC------------------------------
Confidence 46899999999999999999999 999999999875321 00 00
Q ss_pred cccccccccccccccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecE
Q 014324 85 QATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNL 162 (426)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~ 162 (426)
..+.+.+.+.++ .|+ ++.++++.+++.+ +..++++ +.+|++ +++|.
T Consensus 202 -------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~v~---~~~g~~--i~aD~ 249 (472)
T 3iwa_A 202 -------------------------KSLSQMLRHDLEKNDVVVHTGEKVVRLEGE--NGKVARV---ITDKRT--LDADL 249 (472)
T ss_dssp -------------------------HHHHHHHHHHHHHTTCEEECSCCEEEEEES--SSBEEEE---EESSCE--EECSE
T ss_pred -------------------------HHHHHHHHHHHHhcCCEEEeCCEEEEEEcc--CCeEEEE---EeCCCE--EEcCE
Confidence 111222233222 477 9999999999852 3345555 457764 89999
Q ss_pred EEeccCCchh
Q 014324 163 LVAADGCLSS 172 (426)
Q Consensus 163 vI~AdG~~S~ 172 (426)
||.|.|..+.
T Consensus 250 Vv~a~G~~p~ 259 (472)
T 3iwa_A 250 VILAAGVSPN 259 (472)
T ss_dssp EEECSCEEEC
T ss_pred EEECCCCCcC
Confidence 9999998654
No 239
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.70 E-value=0.00032 Score=64.54 Aligned_cols=97 Identities=19% Similarity=0.239 Sum_probs=68.1
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeeccccc
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQA 86 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (426)
.+|+|||+|++|+-+|..|++.|.+|+++++.+.+.. .+
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~----------~~------------------------------- 191 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA----------NK------------------------------- 191 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS----------CH-------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc----------ch-------------------------------
Confidence 5799999999999999999999999999998765310 00
Q ss_pred cccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEEe
Q 014324 87 TDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLVA 165 (426)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI~ 165 (426)
.+.+.+.+ ..++ ++.++++.++.. ++....+++.+..+|+..++.+|.||.
T Consensus 192 ------------------------~~~~~l~~--~~gv~i~~~~~v~~i~~--~~~v~~v~~~~~~~g~~~~i~~D~vi~ 243 (325)
T 2q7v_A 192 ------------------------VAQARAFA--NPKMKFIWDTAVEEIQG--ADSVSGVKLRNLKTGEVSELATDGVFI 243 (325)
T ss_dssp ------------------------HHHHHHHT--CTTEEEECSEEEEEEEE--SSSEEEEEEEETTTCCEEEEECSEEEE
T ss_pred ------------------------HHHHHHHh--cCCceEecCCceEEEcc--CCcEEEEEEEECCCCcEEEEEcCEEEE
Confidence 01111111 1478 899999999985 222224444333478766799999999
Q ss_pred ccCCchh
Q 014324 166 ADGCLSS 172 (426)
Q Consensus 166 AdG~~S~ 172 (426)
|.|....
T Consensus 244 a~G~~p~ 250 (325)
T 2q7v_A 244 FIGHVPN 250 (325)
T ss_dssp CSCEEES
T ss_pred ccCCCCC
Confidence 9997643
No 240
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.69 E-value=7.3e-05 Score=73.05 Aligned_cols=37 Identities=22% Similarity=0.407 Sum_probs=33.4
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
...+|+|||||++|+-+|..|++.|.+|+|+|+.+.+
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 221 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHI 221 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCch
Confidence 3468999999999999999999999999999998753
No 241
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.68 E-value=0.00029 Score=64.61 Aligned_cols=97 Identities=18% Similarity=0.120 Sum_probs=68.0
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeeccccc
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQA 86 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (426)
.+|+|||+|++|+-+|..|++.|.+|+++++.+.+.. .
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~----------~-------------------------------- 193 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC----------E-------------------------------- 193 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS----------C--------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC----------C--------------------------------
Confidence 5799999999999999999999999999998654210 0
Q ss_pred cccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEEe
Q 014324 87 TDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLVA 165 (426)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI~ 165 (426)
..+.+.+. +.|+ +++++++.++..++ +....+++.+..+|+..++.+|.||.
T Consensus 194 -----------------------~~l~~~l~---~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~~~~g~~~~i~~D~vi~ 246 (319)
T 3cty_A 194 -----------------------NAYVQEIK---KRNIPYIMNAQVTEIVGDG-KKVTGVKYKDRTTGEEKLIETDGVFI 246 (319)
T ss_dssp -----------------------HHHHHHHH---HTTCCEECSEEEEEEEESS-SSEEEEEEEETTTCCEEEECCSEEEE
T ss_pred -----------------------HHHHHHHh---cCCcEEEcCCeEEEEecCC-ceEEEEEEEEcCCCceEEEecCEEEE
Confidence 00111122 2577 89999999998532 21223443333477766799999999
Q ss_pred ccCCchh
Q 014324 166 ADGCLSS 172 (426)
Q Consensus 166 AdG~~S~ 172 (426)
|.|....
T Consensus 247 a~G~~p~ 253 (319)
T 3cty_A 247 YVGLIPQ 253 (319)
T ss_dssp CCCEEEC
T ss_pred eeCCccC
Confidence 9997654
No 242
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.68 E-value=5.8e-05 Score=71.01 Aligned_cols=35 Identities=31% Similarity=0.599 Sum_probs=32.6
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
.+|+|||||++|+-+|..|++.|.+|+++|+.+.+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 178 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMF 178 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCee
Confidence 57999999999999999999999999999998764
No 243
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.68 E-value=0.00046 Score=63.65 Aligned_cols=101 Identities=17% Similarity=0.169 Sum_probs=69.4
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.+.. .
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~----------~------------------------------- 197 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA----------S------------------------------- 197 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS----------C-------------------------------
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc----------c-------------------------------
Confidence 35899999999999999999999999999998865310 0
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceE-EEEEEeccCCceEEEeecEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTV-TVKAKVLQTDEVIEIKGNLL 163 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v-~v~~~~~~~g~~~~~~~d~v 163 (426)
....++.+ -+.++ ++.++++.++..+++...+ .+++.+..+|+..++.+|.|
T Consensus 198 -----------------------~~~~~~~~---~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~v 251 (333)
T 1vdc_A 198 -----------------------KIMQQRAL---SNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGL 251 (333)
T ss_dssp -----------------------HHHHHHHH---TCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEE
T ss_pred -----------------------HHHHHHHH---hCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEE
Confidence 00001111 13578 8899999999853321123 24443334676667999999
Q ss_pred EeccCCchhh
Q 014324 164 VAADGCLSSI 173 (426)
Q Consensus 164 I~AdG~~S~v 173 (426)
|.|.|.....
T Consensus 252 i~a~G~~p~~ 261 (333)
T 1vdc_A 252 FFAIGHEPAT 261 (333)
T ss_dssp EECSCEEESC
T ss_pred EEEeCCccch
Confidence 9999986443
No 244
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.67 E-value=3.2e-05 Score=75.07 Aligned_cols=37 Identities=30% Similarity=0.344 Sum_probs=33.8
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcC--CcEEEEcccCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAG--WDVVVLEKAGGP 41 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G--~~v~v~E~~~~~ 41 (426)
..+||+||||||+|+.+|..|++.| ++|+|||+.+.+
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP 43 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcC
Confidence 4579999999999999999999998 999999998875
No 245
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.67 E-value=0.00025 Score=68.62 Aligned_cols=98 Identities=13% Similarity=0.142 Sum_probs=69.0
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||+|..|+-+|..|++.|.+|+++|+.+.+.. .. +.
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-----~~--~d------------------------------- 188 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLP-----KY--FD------------------------------- 188 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-----TT--CC-------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccc-----cc--CC-------------------------------
Confidence 35799999999999999999999999999999876421 00 00
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLL 163 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 163 (426)
..+.+.+.+.++ .|+ ++.++++.+++..++ .+.++ +++| ++++|.|
T Consensus 189 ------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~--~v~v~---~~~g---~i~aD~V 236 (452)
T 3oc4_A 189 ------------------------KEMVAEVQKSLEKQAVIFHFEETVLGIEETAN--GIVLE---TSEQ---EISCDSG 236 (452)
T ss_dssp ------------------------HHHHHHHHHHHHTTTEEEEETCCEEEEEECSS--CEEEE---ESSC---EEEESEE
T ss_pred ------------------------HHHHHHHHHHHHHcCCEEEeCCEEEEEEccCC--eEEEE---ECCC---EEEeCEE
Confidence 111122233222 588 999999999985333 44554 4455 3899999
Q ss_pred EeccCCchhh
Q 014324 164 VAADGCLSSI 173 (426)
Q Consensus 164 I~AdG~~S~v 173 (426)
|.|.|.....
T Consensus 237 v~A~G~~p~~ 246 (452)
T 3oc4_A 237 IFALNLHPQL 246 (452)
T ss_dssp EECSCCBCCC
T ss_pred EECcCCCCCh
Confidence 9999986543
No 246
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.67 E-value=0.0004 Score=68.47 Aligned_cols=103 Identities=25% Similarity=0.286 Sum_probs=67.6
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeeccccc
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQA 86 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (426)
.+|+|||||+.|+-+|..|++.|.+|+|+++..... . +.+..
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~-------~--~d~~~----------------------------- 252 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLR-------G--FDQDM----------------------------- 252 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST-------T--SCHHH-----------------------------
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecccccc-------c--CCHHH-----------------------------
Confidence 469999999999999999999999999999742110 0 00000
Q ss_pred cccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecC--CceEEEEEEeccCC-ceEEEeecE
Q 014324 87 TDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEV--KTTVTVKAKVLQTD-EVIEIKGNL 162 (426)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~--~~~v~v~~~~~~~g-~~~~~~~d~ 162 (426)
...+.+.|. +.|+ ++.++++..++..++ ...+.+++.. .+| +..++.+|.
T Consensus 253 ----------------------~~~~~~~l~---~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~-~~g~~~~~~~~D~ 306 (519)
T 3qfa_A 253 ----------------------ANKIGEHME---EHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQS-TNSEEIIEGEYNT 306 (519)
T ss_dssp ----------------------HHHHHHHHH---HTTCEEEESEEEEEEEEEECCTTCEEEEEEEE-SSSSCEEEEEESE
T ss_pred ----------------------HHHHHHHHH---HCCCEEEeCCeEEEEEEccCCCCceEEEEEEE-CCCcEEEEEECCE
Confidence 011222232 2477 889988888875432 1345555432 344 435688999
Q ss_pred EEeccCCchhh
Q 014324 163 LVAADGCLSSI 173 (426)
Q Consensus 163 vI~AdG~~S~v 173 (426)
||.|.|....+
T Consensus 307 vi~a~G~~p~~ 317 (519)
T 3qfa_A 307 VMLAIGRDACT 317 (519)
T ss_dssp EEECSCEEESC
T ss_pred EEEecCCcccC
Confidence 99999986543
No 247
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.65 E-value=2.9e-05 Score=82.30 Aligned_cols=37 Identities=24% Similarity=0.428 Sum_probs=34.3
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPP 42 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~ 42 (426)
.+||+||||||||+++|..|++.|++|+|||+.+.++
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~G 164 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAG 164 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 4799999999999999999999999999999987753
No 248
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.65 E-value=0.00019 Score=69.82 Aligned_cols=101 Identities=19% Similarity=0.150 Sum_probs=70.4
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||||+.|+-+|..|++.|.+|+++++.+.+.. . . +.+
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----~-~-~d~------------------------------ 214 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALI-----T-L-EDQ------------------------------ 214 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-----T-S-CCH------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCC-----C-C-CCH------------------------------
Confidence 35799999999999999999999999999999876421 0 0 010
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEecc--CCceEEEeecE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQ--TDEVIEIKGNL 162 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~--~g~~~~~~~d~ 162 (426)
.+.+.+.+.++ + ++.++++.+++.+++ ..+.++ ++ +|+..++++|.
T Consensus 215 -------------------------~~~~~l~~~l~--v~i~~~~~v~~i~~~~~-~~v~v~---~~~~~G~~~~i~~D~ 263 (466)
T 3l8k_A 215 -------------------------DIVNTLLSILK--LNIKFNSPVTEVKKIKD-DEYEVI---YSTKDGSKKSIFTNS 263 (466)
T ss_dssp -------------------------HHHHHHHHHHC--CCEECSCCEEEEEEEET-TEEEEE---ECCTTSCCEEEEESC
T ss_pred -------------------------HHHHHHHhcCE--EEEEECCEEEEEEEcCC-CcEEEE---EEecCCceEEEEcCE
Confidence 11111222222 6 888999999885431 355555 34 67755699999
Q ss_pred EEeccCCchhhh
Q 014324 163 LVAADGCLSSIR 174 (426)
Q Consensus 163 vI~AdG~~S~vR 174 (426)
||.|.|......
T Consensus 264 vi~a~G~~p~~~ 275 (466)
T 3l8k_A 264 VVLAAGRRPVIP 275 (466)
T ss_dssp EEECCCEEECCC
T ss_pred EEECcCCCcccc
Confidence 999999876544
No 249
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.64 E-value=0.00028 Score=65.22 Aligned_cols=101 Identities=13% Similarity=0.112 Sum_probs=69.5
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+.+.. .+...
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~----------~~~~~--------------------------- 194 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA----------HEASV--------------------------- 194 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS----------CHHHH---------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc----------cHHHH---------------------------
Confidence 35899999999999999999999999999998765311 00000
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
..+.+.|. +.++ ++.++++.+++. ++....+++....+|+..++.+|.||
T Consensus 195 ------------------------~~l~~~l~---~~gv~v~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~i~~D~vi 245 (335)
T 2zbw_A 195 ------------------------KELMKAHE---EGRLEVLTPYELRRVEG--DERVRWAVVFHNQTQEELALEVDAVL 245 (335)
T ss_dssp ------------------------HHHHHHHH---TTSSEEETTEEEEEEEE--SSSEEEEEEEETTTCCEEEEECSEEE
T ss_pred ------------------------HHHHhccc---cCCeEEecCCcceeEcc--CCCeeEEEEEECCCCceEEEecCEEE
Confidence 11222232 2477 999999999985 23322344332337765669999999
Q ss_pred eccCCchh
Q 014324 165 AADGCLSS 172 (426)
Q Consensus 165 ~AdG~~S~ 172 (426)
.|.|..+.
T Consensus 246 ~a~G~~p~ 253 (335)
T 2zbw_A 246 ILAGYITK 253 (335)
T ss_dssp ECCCEEEE
T ss_pred EeecCCCC
Confidence 99997754
No 250
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.63 E-value=2.9e-05 Score=76.90 Aligned_cols=37 Identities=32% Similarity=0.396 Sum_probs=33.0
Q ss_pred CCccEEEEcCChHHHHHHHHHHH-cCCcEEEEcccCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLR-AGWDVVVLEKAGGP 41 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~-~G~~v~v~E~~~~~ 41 (426)
..||+||||||+||+++|..|++ .|++|+|+|+....
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~ 53 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEP 53 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCC
Confidence 46999999999999999999997 67999999998753
No 251
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.62 E-value=0.00045 Score=63.24 Aligned_cols=98 Identities=15% Similarity=0.152 Sum_probs=70.0
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.+.. .+
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~----------~~------------------------------ 193 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA----------QP------------------------------ 193 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS----------CH------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc----------CH------------------------------
Confidence 45799999999999999999999999999998875321 00
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
..+++ +.+ ..++ ++.++++.++..+ +....+++.+..+|+..++.+|.||
T Consensus 194 ------------------------~~~~~-~~~--~~gv~~~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~~~~D~vv 244 (323)
T 3f8d_A 194 ------------------------IYVET-VKK--KPNVEFVLNSVVKEIKGD--KVVKQVVVENLKTGEIKELNVNGVF 244 (323)
T ss_dssp ------------------------HHHHH-HHT--CTTEEEECSEEEEEEEES--SSEEEEEEEETTTCCEEEEECSEEE
T ss_pred ------------------------HHHHH-HHh--CCCcEEEeCCEEEEEecc--CceeEEEEEECCCCceEEEEcCEEE
Confidence 00011 111 2478 8999999999853 3334455444456876679999999
Q ss_pred eccCCchh
Q 014324 165 AADGCLSS 172 (426)
Q Consensus 165 ~AdG~~S~ 172 (426)
.|.|....
T Consensus 245 ~a~G~~p~ 252 (323)
T 3f8d_A 245 IEIGFDPP 252 (323)
T ss_dssp ECCCEECC
T ss_pred EEECCCCC
Confidence 99997643
No 252
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.61 E-value=0.00025 Score=69.47 Aligned_cols=36 Identities=25% Similarity=0.415 Sum_probs=33.2
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.+
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 229 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTC 229 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccch
Confidence 468999999999999999999999999999998764
No 253
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.61 E-value=0.00018 Score=69.64 Aligned_cols=99 Identities=14% Similarity=0.136 Sum_probs=68.1
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+.. .. +.+..
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-----~~--~~~~~---------------------------- 193 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLY-----KY--FDKEF---------------------------- 193 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTT-----TT--SCHHH----------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhh-----hh--hhhhH----------------------------
Confidence 35799999999999999999999999999999876421 00 00000
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEE-EEEEeccCCceEEEeecEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVT-VKAKVLQTDEVIEIKGNLL 163 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~-v~~~~~~~g~~~~~~~d~v 163 (426)
...+.+.|. +.|+ ++.++++.+++.. + ..+. ++ . +|++ +++|.|
T Consensus 194 -----------------------~~~l~~~l~---~~Gv~i~~~~~v~~i~~~-~-~~v~~v~---~-~g~~--i~~D~v 239 (452)
T 2cdu_A 194 -----------------------TDILAKDYE---AHGVNLVLGSKVAAFEEV-D-DEIITKT---L-DGKE--IKSDIA 239 (452)
T ss_dssp -----------------------HHHHHHHHH---HTTCEEEESSCEEEEEEE-T-TEEEEEE---T-TSCE--EEESEE
T ss_pred -----------------------HHHHHHHHH---HCCCEEEcCCeeEEEEcC-C-CeEEEEE---e-CCCE--EECCEE
Confidence 011222232 2478 9999999999842 2 2443 33 3 5654 899999
Q ss_pred EeccCCchhh
Q 014324 164 VAADGCLSSI 173 (426)
Q Consensus 164 I~AdG~~S~v 173 (426)
|.|.|....+
T Consensus 240 v~a~G~~p~~ 249 (452)
T 2cdu_A 240 ILCIGFRPNT 249 (452)
T ss_dssp EECCCEEECC
T ss_pred EECcCCCCCH
Confidence 9999987654
No 254
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.59 E-value=0.00014 Score=70.72 Aligned_cols=98 Identities=18% Similarity=0.212 Sum_probs=68.3
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+.. +.+..
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~---------~~~~~---------------------------- 218 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR---------EDPAI---------------------------- 218 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT---------SCHHH----------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC---------CCHHH----------------------------
Confidence 35899999999999999999999999999999875321 11000
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
...+.+.|. +.|+ ++.++++.+++.++ ..+.++ ++ +. ++++|.||
T Consensus 219 -----------------------~~~l~~~l~---~~Gv~i~~~~~v~~i~~~~--~~~~v~---~~-~~--~i~aD~Vv 264 (467)
T 1zk7_A 219 -----------------------GEAVTAAFR---AEGIEVLEHTQASQVAHMD--GEFVLT---TT-HG--ELRADKLL 264 (467)
T ss_dssp -----------------------HHHHHHHHH---HTTCEEETTCCEEEEEEET--TEEEEE---ET-TE--EEEESEEE
T ss_pred -----------------------HHHHHHHHH---hCCCEEEcCCEEEEEEEeC--CEEEEE---EC-Cc--EEEcCEEE
Confidence 012222232 2477 89999999998532 344444 33 33 48999999
Q ss_pred eccCCchhhh
Q 014324 165 AADGCLSSIR 174 (426)
Q Consensus 165 ~AdG~~S~vR 174 (426)
.|.|..+.+.
T Consensus 265 ~a~G~~p~~~ 274 (467)
T 1zk7_A 265 VATGRTPNTR 274 (467)
T ss_dssp ECSCEEESCT
T ss_pred ECCCCCcCCC
Confidence 9999987643
No 255
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.57 E-value=0.00027 Score=69.25 Aligned_cols=98 Identities=22% Similarity=0.232 Sum_probs=66.8
Q ss_pred CccEEEEcCChHHHHHHHHHHH----cCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceee
Q 014324 6 KGKAVIVGGSIAGISCAHALLR----AGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTI 81 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~----~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 81 (426)
..+|+|||||+.|+-+|..|++ .|.+|+++++.+.+.. .. +.+
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~-----~~--l~~-------------------------- 226 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMG-----KI--LPE-------------------------- 226 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTT-----TT--SCH--------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccc-----cc--CCH--------------------------
Confidence 3579999999999999999886 4789999987654210 00 000
Q ss_pred ccccccccccccccccccCCCcchhccHHHHHHHHHhcC-CCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEe
Q 014324 82 DQNQATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNAL-PPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIK 159 (426)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~ 159 (426)
.+.+.+.+.+ +.|+ ++.+++|.+++.++ ..+.++ +.+|++ +.
T Consensus 227 -----------------------------~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~--~~~~v~---l~dG~~--i~ 270 (493)
T 1m6i_A 227 -----------------------------YLSNWTMEKVRREGVKVMPNAIVQSVGVSS--GKLLIK---LKDGRK--VE 270 (493)
T ss_dssp -----------------------------HHHHHHHHHHHTTTCEEECSCCEEEEEEET--TEEEEE---ETTSCE--EE
T ss_pred -----------------------------HHHHHHHHHHHhcCCEEEeCCEEEEEEecC--CeEEEE---ECCCCE--EE
Confidence 0111122222 2478 99999999997533 345555 567864 89
Q ss_pred ecEEEeccCCchh
Q 014324 160 GNLLVAADGCLSS 172 (426)
Q Consensus 160 ~d~vI~AdG~~S~ 172 (426)
||.||.|.|..+.
T Consensus 271 aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 271 TDHIVAAVGLEPN 283 (493)
T ss_dssp ESEEEECCCEEEC
T ss_pred CCEEEECCCCCcc
Confidence 9999999998754
No 256
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.57 E-value=2.6e-05 Score=77.18 Aligned_cols=36 Identities=36% Similarity=0.500 Sum_probs=33.3
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
..+|+||||||+||+++|..|++ |.+|+|+|+....
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 45899999999999999999999 9999999999764
No 257
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.56 E-value=0.00011 Score=68.94 Aligned_cols=100 Identities=14% Similarity=0.123 Sum_probs=67.9
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeeccccc
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQA 86 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (426)
.+|+|||+|++|+-+|..|++.|.+|+++++.+.+.. . +. ..
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~-----~-----~~---~~------------------------- 205 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG-----H-----GK---TA------------------------- 205 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS-----C-----SH---HH-------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC-----C-----HH---HH-------------------------
Confidence 5799999999999999999999999999998765311 0 00 00
Q ss_pred cccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEEe
Q 014324 87 TDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLVA 165 (426)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI~ 165 (426)
..+.+.+. +.++ +++++++.++..++ +....|++. ..+|+..++.+|.||.
T Consensus 206 -----------------------~~l~~~~~---~~gv~i~~~~~v~~i~~~~-~~v~~v~~~-~~~g~~~~i~~D~vi~ 257 (360)
T 3ab1_A 206 -----------------------HEVERARA---NGTIDVYLETEVASIEESN-GVLTRVHLR-SSDGSKWTVEADRLLI 257 (360)
T ss_dssp -----------------------HSSHHHHH---HTSEEEESSEEEEEEEEET-TEEEEEEEE-ETTCCEEEEECSEEEE
T ss_pred -----------------------HHHHHHhh---cCceEEEcCcCHHHhccCC-CceEEEEEE-ecCCCeEEEeCCEEEE
Confidence 00111121 2467 89999999998542 221234432 3577656699999999
Q ss_pred ccCCchh
Q 014324 166 ADGCLSS 172 (426)
Q Consensus 166 AdG~~S~ 172 (426)
|.|....
T Consensus 258 a~G~~p~ 264 (360)
T 3ab1_A 258 LIGFKSN 264 (360)
T ss_dssp CCCBCCS
T ss_pred CCCCCCC
Confidence 9996643
No 258
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.55 E-value=3.4e-05 Score=77.99 Aligned_cols=36 Identities=31% Similarity=0.350 Sum_probs=33.6
Q ss_pred CccEEEEcCChHHHHHHHHHHHcC--------CcEEEEcccC-CC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAG--------WDVVVLEKAG-GP 41 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G--------~~v~v~E~~~-~~ 41 (426)
..+|+|||||++||++|+.|+++| ++|+|||+++ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 468999999999999999999999 9999999998 66
No 259
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.54 E-value=0.00028 Score=69.61 Aligned_cols=100 Identities=18% Similarity=0.228 Sum_probs=69.4
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
+.+++|||||+.|+-+|..+++.|.+|+|+++....+. ..+...
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~~---------~D~ei~--------------------------- 266 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRG---------FDQQCA--------------------------- 266 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSSTT---------SCHHHH---------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEecccccccc---------cchhHH---------------------------
Confidence 35899999999999999999999999999987433210 000000
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
..+++.|. ..|+ ++.++.+..++..+ ..+.++ ..++.. +.+|.|+
T Consensus 267 ------------------------~~l~~~l~---~~gi~~~~~~~v~~~~~~~--~~~~v~---~~~~~~--~~~D~vL 312 (542)
T 4b1b_A 267 ------------------------VKVKLYME---EQGVMFKNGILPKKLTKMD--DKILVE---FSDKTS--ELYDTVL 312 (542)
T ss_dssp ------------------------HHHHHHHH---HTTCEEEETCCEEEEEEET--TEEEEE---ETTSCE--EEESEEE
T ss_pred ------------------------HHHHHHHH---hhcceeecceEEEEEEecC--CeEEEE---EcCCCe--EEEEEEE
Confidence 12222232 2477 88999999988644 356665 556655 6899999
Q ss_pred eccCCchhhhh
Q 014324 165 AADGCLSSIRQ 175 (426)
Q Consensus 165 ~AdG~~S~vR~ 175 (426)
.|.|....+-.
T Consensus 313 vAvGR~Pnt~~ 323 (542)
T 4b1b_A 313 YAIGRKGDIDG 323 (542)
T ss_dssp ECSCEEESCGG
T ss_pred EcccccCCccc
Confidence 99998876654
No 260
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.53 E-value=6.6e-05 Score=73.78 Aligned_cols=38 Identities=24% Similarity=0.138 Sum_probs=34.4
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
+..+||+|||+|++|+++|..|++.|++|+|+|+....
T Consensus 3 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 40 (504)
T 1n4w_A 3 GGYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLW 40 (504)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 35689999999999999999999999999999998753
No 261
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.52 E-value=0.00056 Score=63.23 Aligned_cols=98 Identities=16% Similarity=0.135 Sum_probs=66.7
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.+.. .+
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~-------------------------~~--------------- 194 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA-------------------------SK--------------- 194 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS-------------------------CT---------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc-------------------------cH---------------
Confidence 35899999999999999999999999999998764210 00
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
...++.+. +.++ ++.++++.++..++....+.+ .+..+|+..++.+|.||
T Consensus 195 ------------------------~~~~~~~~---~~gV~v~~~~~v~~i~~~~~~~~v~~--~~~~~g~~~~i~~D~vi 245 (335)
T 2a87_A 195 ------------------------IMLDRARN---NDKIRFLTNHTVVAVDGDTTVTGLRV--RDTNTGAETTLPVTGVF 245 (335)
T ss_dssp ------------------------THHHHHHH---CTTEEEECSEEEEEEECSSSCCEEEE--EEETTSCCEEECCSCEE
T ss_pred ------------------------HHHHHHhc---cCCcEEEeCceeEEEecCCcEeEEEE--EEcCCCceEEeecCEEE
Confidence 00011111 3578 889999999874321122433 22346665568999999
Q ss_pred eccCCchh
Q 014324 165 AADGCLSS 172 (426)
Q Consensus 165 ~AdG~~S~ 172 (426)
.|.|....
T Consensus 246 ~a~G~~p~ 253 (335)
T 2a87_A 246 VAIGHEPR 253 (335)
T ss_dssp ECSCEEEC
T ss_pred EccCCccC
Confidence 99997643
No 262
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.51 E-value=6.9e-05 Score=74.97 Aligned_cols=38 Identities=26% Similarity=0.359 Sum_probs=34.9
Q ss_pred CCCccEEEEcCChHHHHHHHHHHH-cCCcEEEEcccCCC
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLR-AGWDVVVLEKAGGP 41 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~-~G~~v~v~E~~~~~ 41 (426)
+..+|++|||+|++|+++|..|++ .|.+|+|+|+....
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 456899999999999999999999 79999999999765
No 263
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.50 E-value=5.8e-05 Score=75.12 Aligned_cols=36 Identities=33% Similarity=0.374 Sum_probs=33.7
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcC-CcEEEEcccCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAG-WDVVVLEKAGG 40 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G-~~v~v~E~~~~ 40 (426)
..||+||||||.||+++|..|++.| .+|+|+|+...
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 5699999999999999999999998 79999999887
No 264
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.49 E-value=0.00026 Score=70.98 Aligned_cols=97 Identities=20% Similarity=0.268 Sum_probs=67.9
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||||++|+-+|..|++.|.+|+++++.+.+.. . +.+..
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----~---~~~~~---------------------------- 230 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMP-----P---IDYEM---------------------------- 230 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-----T---SCHHH----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccc-----c---CCHHH----------------------------
Confidence 35899999999999999999999999999998776421 0 11000
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
...+.+.|. +.|+ ++.++++.+++. ++..|+ +.+|+. +.+|.||
T Consensus 231 -----------------------~~~l~~~l~---~~GV~i~~~~~v~~i~~--~~~~v~-----~~~g~~--i~~D~Vi 275 (588)
T 3ics_A 231 -----------------------AAYVHEHMK---NHDVELVFEDGVDALEE--NGAVVR-----LKSGSV--IQTDMLI 275 (588)
T ss_dssp -----------------------HHHHHHHHH---HTTCEEECSCCEEEEEG--GGTEEE-----ETTSCE--EECSEEE
T ss_pred -----------------------HHHHHHHHH---HcCCEEEECCeEEEEec--CCCEEE-----ECCCCE--EEcCEEE
Confidence 012222232 2477 889999999873 333443 467764 8999999
Q ss_pred eccCCchhh
Q 014324 165 AADGCLSSI 173 (426)
Q Consensus 165 ~AdG~~S~v 173 (426)
.|.|..+..
T Consensus 276 ~a~G~~p~~ 284 (588)
T 3ics_A 276 LAIGVQPES 284 (588)
T ss_dssp ECSCEEECC
T ss_pred EccCCCCCh
Confidence 999986543
No 265
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.49 E-value=0.00079 Score=61.37 Aligned_cols=97 Identities=10% Similarity=0.101 Sum_probs=68.7
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+.+.. .+
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~----------~~------------------------------ 186 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRA----------AP------------------------------ 186 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBS----------CH------------------------------
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCC----------CH------------------------------
Confidence 35799999999999999999999999999998765310 00
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
..+++.+. +.|+ +++++++.++..+++ ....+++. ..+|+..++.+|.||
T Consensus 187 ------------------------~~~~~~~~---~~gv~~~~~~~v~~i~~~~~-~~~~v~~~-~~~g~~~~~~~D~vv 237 (315)
T 3r9u_A 187 ------------------------STVEKVKK---NEKIELITSASVDEVYGDKM-GVAGVKVK-LKDGSIRDLNVPGIF 237 (315)
T ss_dssp ------------------------HHHHHHHH---CTTEEEECSCEEEEEEEETT-EEEEEEEE-CTTSCEEEECCSCEE
T ss_pred ------------------------HHHHHHHh---cCCeEEEeCcEEEEEEcCCC-cEEEEEEE-cCCCCeEEeecCeEE
Confidence 11112221 3578 899999999985432 22224432 457876679999999
Q ss_pred eccCCch
Q 014324 165 AADGCLS 171 (426)
Q Consensus 165 ~AdG~~S 171 (426)
.|.|...
T Consensus 238 ~a~G~~p 244 (315)
T 3r9u_A 238 TFVGLNV 244 (315)
T ss_dssp ECSCEEE
T ss_pred EEEcCCC
Confidence 9999753
No 266
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.47 E-value=9.7e-05 Score=72.63 Aligned_cols=37 Identities=22% Similarity=0.356 Sum_probs=34.2
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
+.++|++|||+|++|+++|..|++.|.+|+|+|+...
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 3568999999999999999999999999999999864
No 267
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.44 E-value=0.00094 Score=67.08 Aligned_cols=32 Identities=34% Similarity=0.636 Sum_probs=30.4
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEccc
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKA 38 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~ 38 (426)
.+|+|||||++|+-+|..|++.|.+|+|+++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 47999999999999999999999999999987
No 268
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.42 E-value=0.00053 Score=64.20 Aligned_cols=35 Identities=29% Similarity=0.559 Sum_probs=29.8
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
.+|+|||+|++|+-+|..|++.|.+|+++++.+.+
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~ 201 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGL 201 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC----
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCC
Confidence 47999999999999999999999999999998753
No 269
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.39 E-value=0.00077 Score=65.15 Aligned_cols=35 Identities=29% Similarity=0.464 Sum_probs=32.7
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
.+|+|||||+.|+-+|..|++.|.+|+++|+.+.+
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 183 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERV 183 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 58999999999999999999999999999998764
No 270
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.37 E-value=0.0012 Score=65.09 Aligned_cols=98 Identities=14% Similarity=0.110 Sum_probs=68.2
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||||++|+-+|..|++.|.+|+++++.+.+.. .
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~-------------------------~---------------- 393 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA-------------------------D---------------- 393 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS-------------------------C----------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc-------------------------C----------------
Confidence 35899999999999999999999999999998765210 0
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
..+.+.|.+ ..++ ++.+++++++..++ +....+++.+..+|+..++.+|.||
T Consensus 394 ------------------------~~l~~~l~~--~~gV~v~~~~~v~~i~~~~-~~v~~v~~~~~~~g~~~~i~~D~vi 446 (521)
T 1hyu_A 394 ------------------------QVLQDKVRS--LKNVDIILNAQTTEVKGDG-SKVVGLEYRDRVSGDIHSVALAGIF 446 (521)
T ss_dssp ------------------------HHHHHHHTT--CTTEEEECSEEEEEEEECS-SSEEEEEEEETTTCCEEEEECSEEE
T ss_pred ------------------------HHHHHHHhc--CCCcEEEeCCEEEEEEcCC-CcEEEEEEEeCCCCceEEEEcCEEE
Confidence 001111211 1477 89999999987432 2222355444456776679999999
Q ss_pred eccCCch
Q 014324 165 AADGCLS 171 (426)
Q Consensus 165 ~AdG~~S 171 (426)
.|.|...
T Consensus 447 ~a~G~~p 453 (521)
T 1hyu_A 447 VQIGLLP 453 (521)
T ss_dssp ECCCEEE
T ss_pred ECcCCCC
Confidence 9999654
No 271
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.35 E-value=0.00048 Score=66.35 Aligned_cols=94 Identities=13% Similarity=0.220 Sum_probs=66.4
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+... . .+.
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~------~--d~~----------------------------- 189 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL------M--DAD----------------------------- 189 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT------S--CGG-----------------------------
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeecccccc------c--cch-----------------------------
Confidence 357999999999999999999999999999998764210 0 000
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
. ...+.+.|.+ .|+ ++.++++.+++ . ..++ +++|+. +++|.||
T Consensus 190 ----------~------------~~~~~~~l~~---~gV~i~~~~~v~~~~--~--~~v~-----~~~g~~--~~~D~vl 233 (437)
T 4eqs_A 190 ----------M------------NQPILDELDK---REIPYRLNEEINAIN--G--NEIT-----FKSGKV--EHYDMII 233 (437)
T ss_dssp ----------G------------GHHHHHHHHH---TTCCEEESCCEEEEE--T--TEEE-----ETTSCE--EECSEEE
T ss_pred ----------h------------HHHHHHHhhc---cceEEEeccEEEEec--C--Ceee-----ecCCeE--EeeeeEE
Confidence 0 0222233332 467 88999988775 2 2343 567876 8999999
Q ss_pred eccCCchh
Q 014324 165 AADGCLSS 172 (426)
Q Consensus 165 ~AdG~~S~ 172 (426)
.|.|....
T Consensus 234 ~a~G~~Pn 241 (437)
T 4eqs_A 234 EGVGTHPN 241 (437)
T ss_dssp ECCCEEES
T ss_pred EEeceecC
Confidence 99997654
No 272
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.35 E-value=0.00011 Score=73.12 Aligned_cols=35 Identities=26% Similarity=0.468 Sum_probs=32.5
Q ss_pred CCccEEEEcCChHHHHHHHHHHHc-CCcEEEEcccC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRA-GWDVVVLEKAG 39 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~-G~~v~v~E~~~ 39 (426)
..||+||||||.||+++|..|++. +.+|+|+|+..
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 468999999999999999999975 79999999998
No 273
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.32 E-value=0.00014 Score=72.23 Aligned_cols=37 Identities=24% Similarity=0.320 Sum_probs=34.1
Q ss_pred CCccEEEEcCChHHHHHHHHHHHc-CCcEEEEcccCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRA-GWDVVVLEKAGGP 41 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~-G~~v~v~E~~~~~ 41 (426)
..+||+|||+|++|+++|..|++. |.+|+|+|+....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 468999999999999999999998 8999999999754
No 274
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.30 E-value=0.00055 Score=62.96 Aligned_cols=96 Identities=14% Similarity=0.140 Sum_probs=68.3
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.+.. . ...
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~-------~-----------------~~~-------------- 195 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA-------H-----------------EHS-------------- 195 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS-------C-----------------HHH--------------
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc-------c-----------------HHH--------------
Confidence 35799999999999999999999999999998765310 0 000
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
+.+ |. +.++ ++.++++.++..++ ..+.+++.+..+|+..++.+|.||
T Consensus 196 --------------------------~~~-l~---~~gv~~~~~~~v~~i~~~~--~~~~v~~~~~~~g~~~~~~~D~vv 243 (332)
T 3lzw_A 196 --------------------------VEN-LH---ASKVNVLTPFVPAELIGED--KIEQLVLEEVKGDRKEILEIDDLI 243 (332)
T ss_dssp --------------------------HHH-HH---HSSCEEETTEEEEEEECSS--SCCEEEEEETTSCCEEEEECSEEE
T ss_pred --------------------------HHH-Hh---cCCeEEEeCceeeEEecCC--ceEEEEEEecCCCceEEEECCEEE
Confidence 000 21 2477 88899999988432 244455544456666679999999
Q ss_pred eccCCch
Q 014324 165 AADGCLS 171 (426)
Q Consensus 165 ~AdG~~S 171 (426)
.|.|...
T Consensus 244 ~a~G~~p 250 (332)
T 3lzw_A 244 VNYGFVS 250 (332)
T ss_dssp ECCCEEC
T ss_pred EeeccCC
Confidence 9999654
No 275
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.26 E-value=0.0011 Score=64.31 Aligned_cols=99 Identities=16% Similarity=0.188 Sum_probs=68.5
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+.+.. . +.
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~------~--~~------------------------------- 210 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILS------R--FD------------------------------- 210 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST------T--SC-------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc------c--cC-------------------------------
Confidence 45899999999999999999999999999999875321 0 00
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCC-CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALP-PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLL 163 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 163 (426)
..+.+.+.+.++ .|+ ++.++++.+++.++++ .+.|+. +++|+ +.+|.|
T Consensus 211 ------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~-~~~v~~--~~~g~---i~aD~V 260 (463)
T 4dna_A 211 ------------------------QDMRRGLHAAMEEKGIRILCEDIIQSVSADADG-RRVATT--MKHGE---IVADQV 260 (463)
T ss_dssp ------------------------HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTS-CEEEEE--SSSCE---EEESEE
T ss_pred ------------------------HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCC-EEEEEE--cCCCe---EEeCEE
Confidence 011112222222 477 9999999999864332 244431 34564 799999
Q ss_pred EeccCCchhh
Q 014324 164 VAADGCLSSI 173 (426)
Q Consensus 164 I~AdG~~S~v 173 (426)
|.|.|..+..
T Consensus 261 v~a~G~~p~~ 270 (463)
T 4dna_A 261 MLALGRMPNT 270 (463)
T ss_dssp EECSCEEESC
T ss_pred EEeeCcccCC
Confidence 9999987654
No 276
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.26 E-value=0.00011 Score=73.05 Aligned_cols=36 Identities=31% Similarity=0.266 Sum_probs=33.2
Q ss_pred CccEEEEcCChHHHHHHHHHHH-cCCcEEEEcccCCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLR-AGWDVVVLEKAGGP 41 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~-~G~~v~v~E~~~~~ 41 (426)
.||+||||||+||+++|..|++ .|.+|+|+|+....
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 4899999999999999999998 68999999998765
No 277
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.20 E-value=0.00035 Score=69.72 Aligned_cols=38 Identities=16% Similarity=0.145 Sum_probs=36.1
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPT 43 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~ 43 (426)
+|||+|||+|+.|..+|..|++.|.+|+++||++..+.
T Consensus 8 ~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg 45 (650)
T 1vg0_A 8 DFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGG 45 (650)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccC
Confidence 58999999999999999999999999999999999763
No 278
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.09 E-value=0.0029 Score=62.54 Aligned_cols=54 Identities=9% Similarity=0.054 Sum_probs=40.5
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHH
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQ 62 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~ 62 (426)
..+|+|||+|.+|+-+|..|++.|.+|+|+++.+..-... ..-.+.+...+.|+
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~---~~~~~~~~~~~~l~ 231 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPV---GNRPVNPEQIAEIK 231 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEEC---CCCBCCHHHHHHHH
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccC---ccCCCCHHHHHHHH
Confidence 4589999999999999999999999999999998731100 11235555555555
No 279
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.08 E-value=0.0016 Score=63.80 Aligned_cols=44 Identities=18% Similarity=0.091 Sum_probs=30.6
Q ss_pred CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCce--EEEeecEEEeccCCc
Q 014324 122 PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEV--IEIKGNLLVAADGCL 170 (426)
Q Consensus 122 ~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~--~~~~~d~vI~AdG~~ 170 (426)
.|+ ++.+++|++++ ++ .+.+... .+||+. .++.+|+||-|.|..
T Consensus 285 ~GV~v~~~~~v~~v~--~~--~~~~~~~-~~dg~~~~~~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 285 TSIKVHLRTAVAKVE--EK--QLLAKTK-HEDGKITEETIPYGTLIWATGNK 331 (502)
T ss_dssp TTCEEETTEEEEEEC--SS--EEEEEEE-CTTSCEEEEEEECSEEEECCCEE
T ss_pred cceeeecCceEEEEe--CC--ceEEEEE-ecCcccceeeeccCEEEEccCCc
Confidence 478 99999999886 33 3332211 566653 458999999999964
No 280
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.05 E-value=0.00067 Score=54.05 Aligned_cols=40 Identities=23% Similarity=0.425 Sum_probs=31.9
Q ss_pred CCCCCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 1 MEKKEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 1 m~~~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
|..+....|+|+|+|..|..+|..|.++|++|+++|+++.
T Consensus 1 m~~~~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~ 40 (141)
T 3llv_A 1 MTENGRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKE 40 (141)
T ss_dssp -----CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 4333345899999999999999999999999999998653
No 281
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.93 E-value=0.0064 Score=60.15 Aligned_cols=36 Identities=8% Similarity=0.173 Sum_probs=33.4
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
..+|+|||+|++|+-+|..|++.+.+|+|+++.+..
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred CCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 458999999999999999999999999999999874
No 282
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=96.92 E-value=0.0029 Score=60.98 Aligned_cols=35 Identities=17% Similarity=0.224 Sum_probs=31.7
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCc-EEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWD-VVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~-v~v~E~~~~ 40 (426)
..+|+|||+|.+|+-+|..|++.|.+ |+++++...
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~ 247 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGG 247 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCC
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCC
Confidence 35799999999999999999999999 999998754
No 283
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=96.92 E-value=0.0093 Score=54.19 Aligned_cols=35 Identities=26% Similarity=0.389 Sum_probs=32.1
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
..+|+|||||..|+-+|..|++.|.+|+|+|+...
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDA 186 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeeccccc
Confidence 35799999999999999999999999999998665
No 284
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.78 E-value=0.0013 Score=53.41 Aligned_cols=36 Identities=28% Similarity=0.251 Sum_probs=32.6
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
...+|+|+|+|..|..+|..|.+.|++|+++|+++.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 346899999999999999999999999999998765
No 285
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.77 E-value=0.0079 Score=61.37 Aligned_cols=98 Identities=15% Similarity=0.146 Sum_probs=67.0
Q ss_pred ccEEEEc--CChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeeccc
Q 014324 7 GKAVIVG--GSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQN 84 (426)
Q Consensus 7 ~~V~IvG--aG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 84 (426)
.+|+||| +|.+|+-+|..|++.|.+|+++++.+.+.. . . . ...
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~-----~-~-~---------------~~~------------- 568 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSS-----W-T-N---------------NTF------------- 568 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTG-----G-G-G---------------GGT-------------
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccc-----c-c-c---------------cch-------------
Confidence 4699999 999999999999999999999998776321 0 0 0 000
Q ss_pred cccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEE
Q 014324 85 QATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLL 163 (426)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 163 (426)
.+..+.+.|.+ .|+ ++.+++|++++ .+ .+.++. ..+++..++.+|.|
T Consensus 569 -----------------------~~~~l~~~l~~---~GV~i~~~~~V~~i~--~~--~~~v~~--~~~~~~~~i~aD~V 616 (690)
T 3k30_A 569 -----------------------EVNRIQRRLIE---NGVARVTDHAVVAVG--AG--GVTVRD--TYASIERELECDAV 616 (690)
T ss_dssp -----------------------CHHHHHHHHHH---TTCEEEESEEEEEEE--TT--EEEEEE--TTTCCEEEEECSEE
T ss_pred -----------------------hHHHHHHHHHH---CCCEEEcCcEEEEEE--CC--eEEEEE--ccCCeEEEEECCEE
Confidence 01233333432 478 99999999987 33 233331 23455556899999
Q ss_pred EeccCCch
Q 014324 164 VAADGCLS 171 (426)
Q Consensus 164 I~AdG~~S 171 (426)
|.|.|..+
T Consensus 617 V~A~G~~p 624 (690)
T 3k30_A 617 VMVTARLP 624 (690)
T ss_dssp EEESCEEE
T ss_pred EECCCCCC
Confidence 99999753
No 286
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.77 E-value=0.0079 Score=58.14 Aligned_cols=36 Identities=25% Similarity=0.326 Sum_probs=31.5
Q ss_pred CccEEEEcCChHHHHHHHHHH--------------------HcCC-cEEEEcccCCC
Q 014324 6 KGKAVIVGGSIAGISCAHALL--------------------RAGW-DVVVLEKAGGP 41 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~--------------------~~G~-~v~v~E~~~~~ 41 (426)
..+|+|||+|.+|+-+|..|+ +.|. +|+|++++...
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPL 201 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChH
Confidence 358999999999999999999 6788 69999998763
No 287
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.75 E-value=0.0019 Score=52.22 Aligned_cols=35 Identities=26% Similarity=0.346 Sum_probs=32.1
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
.+..|+|+|+|..|..+|..|.+.|++|+++|+.+
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 44689999999999999999999999999999974
No 288
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.71 E-value=0.0015 Score=51.84 Aligned_cols=39 Identities=21% Similarity=0.288 Sum_probs=31.1
Q ss_pred CCCCCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 1 MEKKEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 1 m~~~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
|......+|+|+|+|..|..+|..|.+.|++|+++|+..
T Consensus 1 m~~~~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 1 MGRIKNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp -----CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCCCcCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 433334579999999999999999999999999999864
No 289
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.63 E-value=0.002 Score=50.95 Aligned_cols=34 Identities=24% Similarity=0.321 Sum_probs=30.8
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
.++|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999854
No 290
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.60 E-value=0.0032 Score=50.03 Aligned_cols=35 Identities=26% Similarity=0.299 Sum_probs=32.3
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
+..|+|+|+|..|..+|..|.+.|++|+++|+++.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 35799999999999999999999999999999865
No 291
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=96.50 E-value=0.0023 Score=58.52 Aligned_cols=40 Identities=25% Similarity=0.400 Sum_probs=32.2
Q ss_pred CCCCCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 1 MEKKEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 1 m~~~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
|..|...+|.|||+|..|...|..|+++|++|+++|+++.
T Consensus 1 m~~~~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 1 MASPAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCCCCCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 6566667899999999999999999999999999998765
No 292
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.40 E-value=0.0031 Score=48.05 Aligned_cols=35 Identities=20% Similarity=0.239 Sum_probs=31.5
Q ss_pred CccEEEEcCChHHHHHHHHHHHcC-CcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAG-WDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G-~~v~v~E~~~~ 40 (426)
..+|+|+|+|..|..++..|.++| ++|+++++.+.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~ 40 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLA 40 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHH
Confidence 358999999999999999999999 89999998653
No 293
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=96.39 E-value=0.0035 Score=57.72 Aligned_cols=39 Identities=18% Similarity=0.256 Sum_probs=34.3
Q ss_pred CCCCCccEEEEcCChHHHHHHHHHHHcCC-cEEEEcccCC
Q 014324 2 EKKEKGKAVIVGGSIAGISCAHALLRAGW-DVVVLEKAGG 40 (426)
Q Consensus 2 ~~~~~~~V~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~~ 40 (426)
|.+.+++|+|||||-.|.++|..|++.|+ +|+++|+...
T Consensus 5 ~~~~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 5 LVQRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKG 44 (331)
T ss_dssp CCSCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 44455799999999999999999999998 9999999864
No 294
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.37 E-value=0.014 Score=52.39 Aligned_cols=33 Identities=21% Similarity=0.224 Sum_probs=29.6
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
..+|+|||+|++|+-+|..|++.| +|+++++.+
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~ 173 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGI 173 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTT
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCC
Confidence 458999999999999999999999 999987654
No 295
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=96.35 E-value=0.0038 Score=56.19 Aligned_cols=38 Identities=16% Similarity=0.227 Sum_probs=33.7
Q ss_pred CCCCCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 1 MEKKEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 1 m~~~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
||.+ .+|.|||+|..|...|..|+++|++|+++|+.+.
T Consensus 1 Mm~~--~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 1 MTGI--TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTD 38 (283)
T ss_dssp CCSC--CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCCC--CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 6543 5799999999999999999999999999998765
No 296
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=96.33 E-value=0.0028 Score=57.71 Aligned_cols=40 Identities=25% Similarity=0.400 Sum_probs=32.0
Q ss_pred CCCCCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 1 MEKKEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 1 m~~~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
|......+|+|||||..|..-|..++.+|++|+++|..+.
T Consensus 1 Ma~p~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 1 MASPAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCCCCCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 5554556899999999999999999999999999998765
No 297
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.29 E-value=0.0037 Score=60.28 Aligned_cols=37 Identities=24% Similarity=0.191 Sum_probs=33.3
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
....+|.|||.|.+|+++|..|+++|++|+++|++..
T Consensus 7 ~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~ 43 (451)
T 3lk7_A 7 FENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPF 43 (451)
T ss_dssp TTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCG
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcc
Confidence 3456899999999999999999999999999998763
No 298
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.16 E-value=0.02 Score=55.19 Aligned_cols=36 Identities=28% Similarity=0.515 Sum_probs=30.7
Q ss_pred CccEEEEcCChHHHHHHHHHHHc--------------------CC-cEEEEcccCCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRA--------------------GW-DVVVLEKAGGP 41 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~--------------------G~-~v~v~E~~~~~ 41 (426)
..+|+|||+|.+|+-+|..|++. |. +|+|++++...
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 35799999999999999999974 64 89999998753
No 299
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.13 E-value=0.006 Score=50.81 Aligned_cols=35 Identities=17% Similarity=0.147 Sum_probs=31.8
Q ss_pred CccEEEEcCChHHHHHHHHHHHc-CCcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRA-GWDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~-G~~v~v~E~~~~ 40 (426)
..+|+|+|+|..|..+|..|.+. |++|+++|+++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~ 74 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREE 74 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHH
Confidence 45799999999999999999999 999999998754
No 300
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.09 E-value=0.0049 Score=58.11 Aligned_cols=36 Identities=36% Similarity=0.484 Sum_probs=33.5
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPP 42 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~ 42 (426)
.+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l 182 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPL 182 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccc
Confidence 579999999999999999999999999999998753
No 301
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=96.03 E-value=0.0066 Score=55.15 Aligned_cols=34 Identities=21% Similarity=0.474 Sum_probs=31.5
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
.+|.|||+|..|...|..|+++|++|+++|+.+.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~ 49 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTED 49 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 5799999999999999999999999999998764
No 302
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.02 E-value=0.039 Score=53.90 Aligned_cols=36 Identities=8% Similarity=0.132 Sum_probs=30.8
Q ss_pred CccEEEEcCChHHHHHHHHHHHc--CCcEEEEcccCCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRA--GWDVVVLEKAGGP 41 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~--G~~v~v~E~~~~~ 41 (426)
..+|+|||+|-+|.-.+..|+++ +.+|+++=|.+..
T Consensus 246 gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~~ 283 (501)
T 4b63_A 246 PYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSAM 283 (501)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSSC
T ss_pred CcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCcc
Confidence 35799999999999999999876 6789999888654
No 303
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=95.95 E-value=0.0051 Score=56.04 Aligned_cols=35 Identities=11% Similarity=0.221 Sum_probs=32.6
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 58999999999999999999999999999998764
No 304
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=95.93 E-value=0.0066 Score=55.51 Aligned_cols=39 Identities=26% Similarity=0.448 Sum_probs=32.3
Q ss_pred CCCCCCccEEEEcCChHHHHHHHHHHHcCC--cEEEEcccC
Q 014324 1 MEKKEKGKAVIVGGSIAGISCAHALLRAGW--DVVVLEKAG 39 (426)
Q Consensus 1 m~~~~~~~V~IvGaG~aGl~~A~~L~~~G~--~v~v~E~~~ 39 (426)
|++|..++|+|||+|-.|.++|..|+.+|+ +++++|...
T Consensus 1 m~~m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 1 MNKFKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 666777899999999999999999999885 799998754
No 305
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=95.93 E-value=0.016 Score=61.33 Aligned_cols=34 Identities=12% Similarity=0.155 Sum_probs=31.8
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
.+|+|||+|+.|+-+|..|++.|.+|+|+|+.+.
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~ 318 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSS 318 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSS
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCc
Confidence 5799999999999999999999999999999775
No 306
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=95.90 E-value=0.0085 Score=54.55 Aligned_cols=37 Identities=22% Similarity=0.395 Sum_probs=33.3
Q ss_pred CCCCccEEEEcCChHHHHHHHHHHHcCC-cEEEEcccC
Q 014324 3 KKEKGKAVIVGGSIAGISCAHALLRAGW-DVVVLEKAG 39 (426)
Q Consensus 3 ~~~~~~V~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~ 39 (426)
.|...+|.|||+|..|.++|..|++.|+ +|+++|..+
T Consensus 5 ~~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~ 42 (315)
T 3tl2_A 5 TIKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQ 42 (315)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccc
Confidence 3456789999999999999999999999 999999984
No 307
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=95.86 E-value=0.03 Score=51.64 Aligned_cols=33 Identities=12% Similarity=0.234 Sum_probs=30.0
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
..+|+|||+|++|+-+|..|++.| +|+++.+..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 358999999999999999999998 799998884
No 308
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.84 E-value=0.0069 Score=52.07 Aligned_cols=33 Identities=27% Similarity=0.518 Sum_probs=31.0
Q ss_pred cEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 8 KAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 8 ~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
+|+|||+|..|..+|..|.++|++|+++|+++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 699999999999999999999999999998764
No 309
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=95.80 E-value=0.008 Score=55.96 Aligned_cols=38 Identities=18% Similarity=0.161 Sum_probs=31.6
Q ss_pred CCCCCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 1 MEKKEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 1 m~~~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
||+ .++|+|||+|-.|...|..|++.|++|+++++.+.
T Consensus 1 mm~--~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~ 38 (359)
T 1bg6_A 1 MIE--SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQ 38 (359)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCC--cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 554 36899999999999999999999999999988643
No 310
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=95.76 E-value=0.0096 Score=54.93 Aligned_cols=33 Identities=27% Similarity=0.276 Sum_probs=30.6
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKA 38 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~ 38 (426)
.++|+|||+|-.|.++|..|++.|++|+++++.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 358999999999999999999999999999975
No 311
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=95.75 E-value=0.03 Score=57.40 Aligned_cols=33 Identities=24% Similarity=0.297 Sum_probs=31.2
Q ss_pred ccEEEEc--CChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 7 GKAVIVG--GSIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 7 ~~V~IvG--aG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
.+|+||| ||..|+-+|..|++.|.+|+|+++.+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 4899999 99999999999999999999999887
No 312
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.72 E-value=0.0097 Score=55.30 Aligned_cols=37 Identities=24% Similarity=0.206 Sum_probs=32.9
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
+..++|.|||+|-.|.++|..|+++|++|+++++.+.
T Consensus 27 ~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~ 63 (356)
T 3k96_A 27 PFKHPIAILGAGSWGTALALVLARKGQKVRLWSYESD 63 (356)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHH
T ss_pred ccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 3457899999999999999999999999999998643
No 313
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=95.72 E-value=0.0081 Score=54.84 Aligned_cols=39 Identities=23% Similarity=0.177 Sum_probs=31.2
Q ss_pred CCCCCCccEEEEcCChHHHHHHHHHHHcCC-cEEEEcccC
Q 014324 1 MEKKEKGKAVIVGGSIAGISCAHALLRAGW-DVVVLEKAG 39 (426)
Q Consensus 1 m~~~~~~~V~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~ 39 (426)
||.+..++|.|||.|-.|..+|..|++.|+ +|+++++.+
T Consensus 19 ~~~~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 19 YFQSNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred cccCCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 444455789999999999999999999999 999999864
No 314
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=95.65 E-value=0.012 Score=54.08 Aligned_cols=35 Identities=26% Similarity=0.341 Sum_probs=32.1
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCC-cEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGW-DVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~~ 40 (426)
+.+|+|||||-.|.++|..|++.|+ +|+++|....
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEG 49 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 3589999999999999999999998 9999999764
No 315
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.64 E-value=0.01 Score=50.93 Aligned_cols=35 Identities=17% Similarity=0.325 Sum_probs=31.9
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCCcEEEEccc
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKA 38 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~ 38 (426)
.....|+|||||.+|...|..|.+.|.+|+|+++.
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 35678999999999999999999999999999864
No 316
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.51 E-value=0.0094 Score=57.24 Aligned_cols=38 Identities=29% Similarity=0.546 Sum_probs=33.9
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPP 42 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~ 42 (426)
...+|.|||.|++|+++|..|+++|++|+++|.+..+.
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~ 41 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPP 41 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCT
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcc
Confidence 34679999999999999999999999999999987653
No 317
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=95.44 E-value=0.094 Score=55.96 Aligned_cols=34 Identities=26% Similarity=0.519 Sum_probs=31.1
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCC-cEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGW-DVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~~ 40 (426)
.+|+|||||..|+-+|..|.+.|. +|+|+++.+.
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~ 367 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGF 367 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCG
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecCh
Confidence 389999999999999999999996 8999998763
No 318
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.43 E-value=0.014 Score=53.48 Aligned_cols=33 Identities=18% Similarity=0.287 Sum_probs=30.9
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
++|+|||+|-.|.++|..|++.|.+|++++|.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 589999999999999999999999999999864
No 319
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=95.38 E-value=0.018 Score=52.57 Aligned_cols=36 Identities=25% Similarity=0.320 Sum_probs=32.0
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCC--cEEEEcccCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGW--DVVVLEKAGG 40 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~--~v~v~E~~~~ 40 (426)
...+|.|||+|..|.++|..|++.|+ +|+++|+.+.
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~ 69 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPE 69 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHH
Confidence 34689999999999999999999999 8999987654
No 320
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.38 E-value=0.017 Score=49.23 Aligned_cols=35 Identities=20% Similarity=0.204 Sum_probs=31.9
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
.++|.|||+|-.|.++|..|++.|++|+++++.+.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998765
No 321
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=95.36 E-value=0.016 Score=52.06 Aligned_cols=33 Identities=21% Similarity=0.220 Sum_probs=31.1
Q ss_pred cEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 8 KAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 8 ~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
+|.|||+|..|.++|..|++.|++|+++++.+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 699999999999999999999999999998765
No 322
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=95.32 E-value=0.018 Score=54.00 Aligned_cols=36 Identities=19% Similarity=0.276 Sum_probs=32.9
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
...+|+|+|+|++|+.+|..|...|.+|+++|++..
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 346899999999999999999999999999998875
No 323
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=95.30 E-value=0.018 Score=52.51 Aligned_cols=40 Identities=23% Similarity=0.532 Sum_probs=34.1
Q ss_pred CCCCCCccEEEEcCChHHHHHHHHHHHcCC--cEEEEcccCC
Q 014324 1 MEKKEKGKAVIVGGSIAGISCAHALLRAGW--DVVVLEKAGG 40 (426)
Q Consensus 1 m~~~~~~~V~IvGaG~aGl~~A~~L~~~G~--~v~v~E~~~~ 40 (426)
|.++...+|+|||+|..|.++|+.|+..|. +++++|....
T Consensus 1 m~~~~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~ 42 (316)
T 1ldn_A 1 MKNNGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANES 42 (316)
T ss_dssp CTTTTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHH
T ss_pred CCCCCCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcc
Confidence 555566799999999999999999998886 7999998653
No 324
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=95.25 E-value=0.016 Score=52.73 Aligned_cols=33 Identities=24% Similarity=0.291 Sum_probs=30.5
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
++|+|||+|..|..+|..|++.|++|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 479999999999999999999999999998764
No 325
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=95.25 E-value=0.018 Score=52.62 Aligned_cols=36 Identities=19% Similarity=0.348 Sum_probs=31.2
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCC--cEEEEcccCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGW--DVVVLEKAGG 40 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~--~v~v~E~~~~ 40 (426)
++++|+|||+|-.|.++|..|+..|+ +++++|....
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~ 43 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKE 43 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChH
Confidence 45799999999999999999999998 8999998754
No 326
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=95.23 E-value=0.018 Score=52.62 Aligned_cols=37 Identities=30% Similarity=0.520 Sum_probs=32.4
Q ss_pred CCCCccEEEEcCChHHHHHHHHHHHcCC--cEEEEcccC
Q 014324 3 KKEKGKAVIVGGSIAGISCAHALLRAGW--DVVVLEKAG 39 (426)
Q Consensus 3 ~~~~~~V~IvGaG~aGl~~A~~L~~~G~--~v~v~E~~~ 39 (426)
++...+|+|||+|..|.++|..|+..|+ +++++|...
T Consensus 2 ~~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 2 NKHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 3456789999999999999999999997 899999854
No 327
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=95.20 E-value=0.02 Score=52.23 Aligned_cols=37 Identities=27% Similarity=0.388 Sum_probs=33.0
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCC-cEEEEcccCC
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGW-DVVVLEKAGG 40 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~~ 40 (426)
|...+|+|||+|-.|.++|..|+..|+ +++++|....
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEG 42 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 455789999999999999999999999 9999998775
No 328
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.20 E-value=0.017 Score=55.89 Aligned_cols=36 Identities=22% Similarity=0.337 Sum_probs=32.9
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
..++|+|||+|-.|+.+|..|++.|++|+++|+.+.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~ 42 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQA 42 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 457999999999999999999999999999998654
No 329
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=95.18 E-value=0.093 Score=53.25 Aligned_cols=42 Identities=14% Similarity=0.152 Sum_probs=31.7
Q ss_pred CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEEeccCCch
Q 014324 122 PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLVAADGCLS 171 (426)
Q Consensus 122 ~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI~AdG~~S 171 (426)
.|+ ++.++++.++. ++ .+.++ .+|+..++.+|.||.|.|...
T Consensus 586 ~GV~v~~~~~v~~i~--~~--~v~~~----~~G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 586 RGVKMIPGVSYQKID--DD--GLHVV----INGETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp TTCEEECSCEEEEEE--TT--EEEEE----ETTEEEEECCSEEEECCCEEE
T ss_pred cCCEEEeCcEEEEEe--CC--eEEEe----cCCeEEEEeCCEEEECCCccc
Confidence 478 99999999886 33 34432 467656699999999999764
No 330
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=95.17 E-value=0.014 Score=52.75 Aligned_cols=35 Identities=17% Similarity=-0.013 Sum_probs=32.7
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
.++|.|||.|-.|..+|..|++.|++|+++++.+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999998876
No 331
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=95.15 E-value=0.046 Score=52.33 Aligned_cols=43 Identities=7% Similarity=-0.043 Sum_probs=29.2
Q ss_pred CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCc---eEEEeecEEEeccCC
Q 014324 122 PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDE---VIEIKGNLLVAADGC 169 (426)
Q Consensus 122 ~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~---~~~~~~d~vI~AdG~ 169 (426)
.|+ ++.++++++++ .+ .+++... ..+|+ ..++.+|+||.|.|.
T Consensus 221 ~gI~~~~~~~v~~v~--~~--~v~~~~~-~~~g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 221 EGIEAYTNCKVTKVE--DN--KMYVTQV-DEKGETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp TTCEEECSEEEEEEE--TT--EEEEEEE-CTTSCEEEEEEEECSEEEEECCE
T ss_pred CCCEEEcCCEEEEEE--CC--eEEEEec-ccCCccccceEEEEeEEEEcCCC
Confidence 477 89999999886 33 3443311 23443 446899999999884
No 332
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=95.11 E-value=0.0063 Score=52.51 Aligned_cols=36 Identities=19% Similarity=0.173 Sum_probs=31.7
Q ss_pred CCCCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcc
Q 014324 2 EKKEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEK 37 (426)
Q Consensus 2 ~~~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~ 37 (426)
|....++|.|||+|..|.++|..|+++|++|+++++
T Consensus 2 ~~~~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 2 MQAPRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp -CCCCCEEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred CCCCCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 334567899999999999999999999999999887
No 333
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=95.11 E-value=0.021 Score=55.34 Aligned_cols=36 Identities=14% Similarity=0.284 Sum_probs=32.8
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
...+|.|||+|..|...|..|+++|++|+++|+++.
T Consensus 4 ~~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 39 (483)
T 3mog_A 4 NVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAE 39 (483)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 445899999999999999999999999999998765
No 334
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.10 E-value=0.018 Score=52.57 Aligned_cols=33 Identities=30% Similarity=0.366 Sum_probs=30.3
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
++|+|||+|-.|.+.|..|++.|.+|++++|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 479999999999999999999999999999864
No 335
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=95.09 E-value=0.02 Score=52.33 Aligned_cols=34 Identities=24% Similarity=0.357 Sum_probs=31.3
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCC--cEEEEcccC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGW--DVVVLEKAG 39 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~--~v~v~E~~~ 39 (426)
.++|+|||+|-.|.++|..|++.|+ +|+++|+..
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3689999999999999999999998 999999865
No 336
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=95.09 E-value=0.022 Score=51.98 Aligned_cols=35 Identities=26% Similarity=0.382 Sum_probs=32.0
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCC-cEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGW-DVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~~ 40 (426)
.++|+|||+|-.|.++|..|+++|+ +|+++|+...
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~ 39 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEG 39 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCch
Confidence 3689999999999999999999998 9999999764
No 337
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=95.07 E-value=0.025 Score=51.62 Aligned_cols=35 Identities=23% Similarity=0.340 Sum_probs=32.0
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
.++|.|||+|..|...|..|++.|++|+++++...
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998754
No 338
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.06 E-value=0.011 Score=52.44 Aligned_cols=36 Identities=14% Similarity=0.349 Sum_probs=32.6
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
....|+|||||.+|+..|..|.+.|.+|+|+++...
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~~ 47 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDLH 47 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEEC
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 457899999999999999999999999999987653
No 339
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=95.03 E-value=0.021 Score=54.90 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=31.8
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
++|.|||+|-.|+.+|..|+++|++|+++|+.+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHH
Confidence 5899999999999999999999999999998764
No 340
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.02 E-value=0.0093 Score=57.54 Aligned_cols=63 Identities=14% Similarity=0.160 Sum_probs=43.4
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCC--CCCc-ceeccChhHHHHHHHHhcC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTG--SPTG-AGLGLDRPAQRIIQSWLNG 67 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~--~~~~-~~~~l~~~~~~~l~~~~~~ 67 (426)
..++|+|+|+|-.|..+|..|...|++|+|+|+++..-.. ...+ ..+.=.+...+.|++.|..
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~ 67 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQ 67 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTT
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCC
Confidence 3578999999999999999999999999999998653110 0011 1121223345577777764
No 341
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.00 E-value=0.021 Score=54.98 Aligned_cols=35 Identities=20% Similarity=0.256 Sum_probs=33.0
Q ss_pred CccEEEEcCChHHHHHHHHHHHc-CC-cEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRA-GW-DVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~-G~-~v~v~E~~~~ 40 (426)
.++|.|||+|-.|+.+|..|+++ |+ +|+++|+.+.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 35899999999999999999999 99 9999999987
No 342
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=95.00 E-value=0.026 Score=51.56 Aligned_cols=34 Identities=26% Similarity=0.427 Sum_probs=31.4
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCC-cEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGW-DVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~~ 40 (426)
.+|+|||||-.|..+|..|+..|+ +|+++|....
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~ 39 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKN 39 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHH
Confidence 589999999999999999999998 9999998754
No 343
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=94.97 E-value=0.027 Score=51.38 Aligned_cols=37 Identities=32% Similarity=0.399 Sum_probs=33.2
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCC-cEEEEcccCC
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGW-DVVVLEKAGG 40 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~~ 40 (426)
|...+|+|||+|..|.++|..|+..|+ +++++|....
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQG 40 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChH
Confidence 445789999999999999999999998 9999999775
No 344
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=94.97 E-value=0.011 Score=55.33 Aligned_cols=32 Identities=28% Similarity=0.320 Sum_probs=30.0
Q ss_pred cEEEEcCChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 8 KAVIVGGSIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 8 ~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
+|.|||+|-.|.++|..|++.|++|+++++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999998764
No 345
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=94.91 E-value=0.022 Score=52.96 Aligned_cols=36 Identities=17% Similarity=0.248 Sum_probs=32.7
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
...+|+|||+|.+|+.+|..|...|.+|+++|++..
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPE 218 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 346899999999999999999999999999998865
No 346
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=94.90 E-value=0.026 Score=53.97 Aligned_cols=37 Identities=16% Similarity=0.330 Sum_probs=34.0
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
.+.+|.|||.|-.|+.+|..|+++|++|+++|+++..
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~k 43 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARK 43 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTT
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 3578999999999999999999999999999998763
No 347
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=94.86 E-value=0.016 Score=49.93 Aligned_cols=35 Identities=14% Similarity=0.190 Sum_probs=31.3
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEE-EcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVV-LEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v-~E~~~~ 40 (426)
.++|.|||+|-.|.++|..|.+.|++|++ +++.+.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~ 58 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPA 58 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHH
Confidence 36899999999999999999999999998 787654
No 348
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=94.84 E-value=0.022 Score=51.40 Aligned_cols=33 Identities=15% Similarity=0.169 Sum_probs=31.0
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
++|+|||+|-.|.+.|..|++.|.+|++++|..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 479999999999999999999999999999874
No 349
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=94.82 E-value=0.027 Score=51.09 Aligned_cols=36 Identities=25% Similarity=0.195 Sum_probs=32.0
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
..++|.|||.|-.|..+|..|++.|++|+++++.+.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 41 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQ 41 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 346899999999999999999999999999988654
No 350
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.79 E-value=0.027 Score=51.20 Aligned_cols=35 Identities=23% Similarity=0.320 Sum_probs=32.4
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
.++|.|||.|-.|..+|..|++.|++|+++++.+.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 36899999999999999999999999999998765
No 351
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=94.75 E-value=0.026 Score=51.60 Aligned_cols=35 Identities=23% Similarity=0.385 Sum_probs=32.1
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
.++|.|||.|-.|..+|..|++.|++|+++++.+.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 65 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPA 65 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 35899999999999999999999999999998764
No 352
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=94.74 E-value=0.02 Score=52.23 Aligned_cols=32 Identities=19% Similarity=0.121 Sum_probs=29.7
Q ss_pred CccEEEEcCChHHHHHHHHHHHc-----C-CcEEEEcc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRA-----G-WDVVVLEK 37 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~-----G-~~v~v~E~ 37 (426)
.++|.|||+|..|.++|..|++. | ++|++++|
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 36899999999999999999999 9 99999987
No 353
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=94.71 E-value=0.032 Score=49.25 Aligned_cols=35 Identities=17% Similarity=0.115 Sum_probs=31.8
Q ss_pred CccEEEEcCChHHHHHHHHHHHcC----CcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAG----WDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G----~~v~v~E~~~~ 40 (426)
.++|.|||+|-.|.+.|..|.+.| .+|.++++.+.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 458999999999999999999999 69999998865
No 354
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=94.63 E-value=0.033 Score=48.72 Aligned_cols=36 Identities=22% Similarity=0.276 Sum_probs=32.6
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
...+|.|||+|-.|.++|..|++.|++|+++++.+.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 457899999999999999999999999999998765
No 355
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=94.59 E-value=0.032 Score=50.59 Aligned_cols=33 Identities=27% Similarity=0.478 Sum_probs=30.5
Q ss_pred cEEEEcCChHHHHHHHHHHHcCC--cEEEEcccCC
Q 014324 8 KAVIVGGSIAGISCAHALLRAGW--DVVVLEKAGG 40 (426)
Q Consensus 8 ~V~IvGaG~aGl~~A~~L~~~G~--~v~v~E~~~~ 40 (426)
+|+|||+|-.|.++|..|+..|+ +|+++|+...
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~ 36 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDED 36 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHH
Confidence 79999999999999999999998 9999998653
No 356
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=94.59 E-value=0.029 Score=50.35 Aligned_cols=34 Identities=26% Similarity=0.387 Sum_probs=31.8
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
++|.|||.|-.|..+|..|++.|++|+++++.+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4799999999999999999999999999998765
No 357
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.56 E-value=0.038 Score=50.62 Aligned_cols=34 Identities=18% Similarity=0.040 Sum_probs=31.1
Q ss_pred ccEEEEcCChHHHH-HHHHHHHcCCcEEEEcccCC
Q 014324 7 GKAVIVGGSIAGIS-CAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~-~A~~L~~~G~~v~v~E~~~~ 40 (426)
.+|.|||.|.+|++ +|..|.++|++|.++|++..
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 57999999999996 89999999999999999765
No 358
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.52 E-value=0.039 Score=52.76 Aligned_cols=34 Identities=21% Similarity=0.327 Sum_probs=32.1
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
.+|.|||+|..|...|..|+++|++|+++|+++.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 5799999999999999999999999999999875
No 359
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=94.46 E-value=0.036 Score=51.43 Aligned_cols=36 Identities=17% Similarity=0.224 Sum_probs=32.4
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
..++|.|||.|-.|..+|..|++.|++|+++++.+.
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~ 56 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVN 56 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 346899999999999999999999999999998764
No 360
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=94.46 E-value=0.021 Score=53.07 Aligned_cols=37 Identities=19% Similarity=0.057 Sum_probs=32.5
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcC-------CcEEEEcccCC
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAG-------WDVVVLEKAGG 40 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G-------~~v~v~E~~~~ 40 (426)
|..++|.|||+|-.|.++|..|++.| ++|+++++.+.
T Consensus 6 m~~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 6 MASKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 33468999999999999999999999 89999998765
No 361
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=94.46 E-value=0.036 Score=49.83 Aligned_cols=34 Identities=21% Similarity=0.326 Sum_probs=31.3
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
+.+|.|||+|..|...|..|+ +|++|+++|+.+.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~ 45 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEK 45 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHH
Confidence 468999999999999999999 9999999998764
No 362
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=94.45 E-value=0.039 Score=50.51 Aligned_cols=36 Identities=11% Similarity=0.147 Sum_probs=31.6
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcC----CcEEEEcccCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAG----WDVVVLEKAGG 40 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G----~~v~v~E~~~~ 40 (426)
+.++|.|||+|-.|.++|..|.+.| ++|+++++...
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~ 60 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMD 60 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCcc
Confidence 3468999999999999999999999 79999988764
No 363
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=94.42 E-value=0.022 Score=51.97 Aligned_cols=34 Identities=15% Similarity=-0.029 Sum_probs=31.9
Q ss_pred ccEEEEcCChHHHHHHHHHHHcC-CcEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAG-WDVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G-~~v~v~E~~~~ 40 (426)
++|.|||.|-.|..+|..|++.| ++|+++++.+.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~ 59 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFN 59 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 57999999999999999999999 99999999874
No 364
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.38 E-value=0.04 Score=52.20 Aligned_cols=35 Identities=26% Similarity=0.307 Sum_probs=32.5
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
+..|+|||.|..|..+|..|.++|++|+|+|+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 45799999999999999999999999999998865
No 365
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=94.35 E-value=0.04 Score=53.18 Aligned_cols=34 Identities=24% Similarity=0.282 Sum_probs=31.5
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
.+|.|||+|..|...|..|+++|++|+++|+++.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~ 71 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 71 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 4799999999999999999999999999998764
No 366
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.33 E-value=0.015 Score=46.23 Aligned_cols=35 Identities=17% Similarity=0.193 Sum_probs=31.1
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
..+|+|||+|..|..+|..|.+.|++|+++++...
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~ 55 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNID 55 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHH
Confidence 45899999999999999999999999999988653
No 367
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=94.32 E-value=0.037 Score=53.62 Aligned_cols=37 Identities=19% Similarity=0.322 Sum_probs=32.6
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
|.+.+|.|||+|..|..+|..|+++|++|++++|.+.
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~ 49 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSRE 49 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 5667899999999999999999999999999998754
No 368
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=94.31 E-value=0.048 Score=48.90 Aligned_cols=34 Identities=15% Similarity=0.228 Sum_probs=30.9
Q ss_pred ccEEEEcC-ChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 7 GKAVIVGG-SIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGa-G~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
++|.|||+ |-.|..+|..|.+.|++|+++++...
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~ 46 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPE 46 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 58999999 99999999999999999999987643
No 369
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=94.30 E-value=0.033 Score=53.82 Aligned_cols=34 Identities=15% Similarity=0.199 Sum_probs=31.1
Q ss_pred ccEEEEcCChHHHHHHHHHHHc--CCcEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRA--GWDVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~--G~~v~v~E~~~~ 40 (426)
++|.|||+|-.|+.+|..|++. |++|+++|+.+.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~ 41 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNES 41 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 5899999999999999999999 899999998754
No 370
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=94.29 E-value=0.041 Score=53.20 Aligned_cols=36 Identities=14% Similarity=0.182 Sum_probs=32.7
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
..+|+|||+|.+|+-+|..|++.|.+|+++++++.+
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~ 232 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAP 232 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCC
Confidence 357999999999999999999999999999987753
No 371
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=94.28 E-value=0.045 Score=51.39 Aligned_cols=35 Identities=17% Similarity=0.302 Sum_probs=32.0
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
..+|+|+|+|++|+.+|..+...|.+|+++|++..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998765
No 372
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=94.27 E-value=0.038 Score=52.21 Aligned_cols=35 Identities=20% Similarity=0.307 Sum_probs=31.9
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
..+|+|+|+|.+|+.+|..|...|.+|+++|++..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998764
No 373
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=94.26 E-value=0.049 Score=46.57 Aligned_cols=35 Identities=29% Similarity=0.265 Sum_probs=31.2
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
.++|.|||+|-.|...|..|.+.|++|.+++++..
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~ 62 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNPK 62 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35899999999999999999999999999988653
No 374
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=94.24 E-value=0.045 Score=49.77 Aligned_cols=33 Identities=24% Similarity=0.448 Sum_probs=30.1
Q ss_pred cEEEEcCChHHHHHHHHHHHc--CCcEEEEcccCC
Q 014324 8 KAVIVGGSIAGISCAHALLRA--GWDVVVLEKAGG 40 (426)
Q Consensus 8 ~V~IvGaG~aGl~~A~~L~~~--G~~v~v~E~~~~ 40 (426)
+|+|||+|-.|.++|..|++. |.+|+++|+...
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 799999999999999999985 789999999764
No 375
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=94.24 E-value=0.048 Score=52.64 Aligned_cols=36 Identities=11% Similarity=0.254 Sum_probs=33.0
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
..++|.|||.|..|..+|..|+++|++|+++++.+.
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 346899999999999999999999999999998875
No 376
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=94.23 E-value=0.053 Score=48.48 Aligned_cols=35 Identities=14% Similarity=0.317 Sum_probs=31.7
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCC---cEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGW---DVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~---~v~v~E~~~~ 40 (426)
.++|.|||+|-.|.+.|..|.++|+ +|.++++++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~ 40 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLD 40 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHH
Confidence 3689999999999999999999998 8999998764
No 377
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=94.22 E-value=0.034 Score=53.25 Aligned_cols=33 Identities=24% Similarity=0.409 Sum_probs=30.7
Q ss_pred cEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 8 KAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 8 ~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
+|.|||+|-.|+.+|..|++.|++|+++|+.+.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~ 34 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSST 34 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 699999999999999999999999999998654
No 378
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=94.21 E-value=0.057 Score=51.37 Aligned_cols=38 Identities=24% Similarity=0.232 Sum_probs=33.5
Q ss_pred CCCCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 3 KKEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 3 ~~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
.+...+|+|+|+|..|..++..+++.|++|+++|..+.
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~ 69 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPA 69 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 44567899999999999999999999999999987654
No 379
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=94.20 E-value=0.043 Score=50.10 Aligned_cols=33 Identities=27% Similarity=0.401 Sum_probs=29.4
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
.++|+|||+|-.|.++|..|++.|.+|+++ +++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 468999999999999999999999999999 543
No 380
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=94.20 E-value=0.049 Score=49.44 Aligned_cols=34 Identities=32% Similarity=0.495 Sum_probs=30.9
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCC-cEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGW-DVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~~ 40 (426)
++|+|||||-.|..+|..|+..|+ +|+++|....
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~ 37 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEG 37 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCcc
Confidence 489999999999999999999997 9999998754
No 381
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=94.19 E-value=0.045 Score=49.93 Aligned_cols=37 Identities=24% Similarity=0.413 Sum_probs=32.2
Q ss_pred CCCCccEEEEcCChHHHHHHHHHHHcCC--cEEEEcccC
Q 014324 3 KKEKGKAVIVGGSIAGISCAHALLRAGW--DVVVLEKAG 39 (426)
Q Consensus 3 ~~~~~~V~IvGaG~aGl~~A~~L~~~G~--~v~v~E~~~ 39 (426)
++...+|+|||+|..|.++|..|+..|+ +++++|...
T Consensus 6 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 6 DKDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 3556799999999999999999999998 899999854
No 382
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=94.18 E-value=0.039 Score=52.33 Aligned_cols=34 Identities=24% Similarity=0.271 Sum_probs=31.1
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
.++|.|||+|-.|+.+|..|++ |++|+++|+.+.
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 3589999999999999999998 999999998765
No 383
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=94.18 E-value=0.06 Score=48.83 Aligned_cols=35 Identities=23% Similarity=0.371 Sum_probs=32.1
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
..+|.|||.|..|..+|..|.+.|++|+++++.+.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 43 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPG 43 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999988764
No 384
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=94.15 E-value=0.11 Score=48.70 Aligned_cols=36 Identities=25% Similarity=0.342 Sum_probs=32.5
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
...|+|+|+|..|..+|..+++.|++|++++..+..
T Consensus 14 ~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~ 49 (389)
T 3q2o_A 14 GKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNS 49 (389)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCC
Confidence 458999999999999999999999999999987653
No 385
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=94.13 E-value=0.046 Score=50.27 Aligned_cols=34 Identities=18% Similarity=0.277 Sum_probs=31.4
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
.++|.|||+|-.|.++|..|++.|++|++++|.+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4689999999999999999999999999998764
No 386
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=94.13 E-value=0.085 Score=50.31 Aligned_cols=42 Identities=7% Similarity=0.012 Sum_probs=29.5
Q ss_pred CCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEEeccCCc
Q 014324 122 PEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLVAADGCL 170 (426)
Q Consensus 122 ~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI~AdG~~ 170 (426)
.|+ ++.++++++++ .+ .++++ ..+++..++.+|+||.|.|..
T Consensus 213 ~GV~i~~~~~v~~v~--~~--~v~~~---~~~~~g~~i~~D~vv~a~G~~ 255 (430)
T 3h28_A 213 RNIDWIANVAVKAIE--PD--KVIYE---DLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp TTCEEECSCEEEEEC--SS--EEEEE---CTTSCEEEEECSEEEEECEEE
T ss_pred CCCEEEeCCEEEEEe--CC--eEEEE---ecCCCceEEeeeEEEECCCCc
Confidence 478 99999999886 33 34433 223444569999999999865
No 387
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=94.06 E-value=0.061 Score=48.06 Aligned_cols=35 Identities=29% Similarity=0.430 Sum_probs=32.1
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
++|+|.|+|..|..++..|.++|++|+++.|....
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~ 38 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQP 38 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 57999999999999999999999999999988653
No 388
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=94.03 E-value=0.043 Score=50.39 Aligned_cols=30 Identities=20% Similarity=0.297 Sum_probs=28.9
Q ss_pred cEEEEcCChHHHHHHHHHHHcCCcEEEEcc
Q 014324 8 KAVIVGGSIAGISCAHALLRAGWDVVVLEK 37 (426)
Q Consensus 8 ~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~ 37 (426)
+|.|||+|-.|.++|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 699999999999999999999999999998
No 389
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=94.01 E-value=0.048 Score=49.47 Aligned_cols=32 Identities=34% Similarity=0.425 Sum_probs=29.7
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
++|+|||+|-.|.+.|..|+ .|.+|++++|..
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 58999999999999999999 999999999865
No 390
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=94.01 E-value=0.036 Score=49.73 Aligned_cols=33 Identities=33% Similarity=0.428 Sum_probs=31.2
Q ss_pred cEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 8 KAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 8 ~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
+|.|||.|-.|..+|..|++.|++|+++++.+.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 699999999999999999999999999998765
No 391
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.92 E-value=0.049 Score=50.66 Aligned_cols=35 Identities=29% Similarity=0.475 Sum_probs=31.5
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
..+|+|+|+|.+|+.++..|+..|.+|++++++..
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~ 201 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVE 201 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 36899999999999999999999999999988653
No 392
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=93.88 E-value=0.05 Score=47.71 Aligned_cols=35 Identities=23% Similarity=0.292 Sum_probs=31.6
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCC-cEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGW-DVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~~ 40 (426)
..+|+|||+|-.|..+|..|++.|+ +++|+|+..-
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTV 66 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCc
Confidence 3589999999999999999999998 8999998764
No 393
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=93.88 E-value=0.049 Score=52.84 Aligned_cols=34 Identities=21% Similarity=0.246 Sum_probs=31.0
Q ss_pred ccEEEEcCChHHHHHHHHHHHc--CCcEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRA--GWDVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~--G~~v~v~E~~~~ 40 (426)
++|.|||+|-.|+.+|..|+++ |++|+++|+.+.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~ 45 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTA 45 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 5899999999999999999998 799999998654
No 394
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=93.85 E-value=0.047 Score=53.93 Aligned_cols=36 Identities=11% Similarity=0.246 Sum_probs=33.4
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
..+|+|||+|.+|+-+|..|++.|.+|+||+|.+..
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANY 226 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 458999999999999999999999999999999873
No 395
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=93.76 E-value=0.054 Score=48.67 Aligned_cols=34 Identities=21% Similarity=0.162 Sum_probs=30.9
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCC--cEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGW--DVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~--~v~v~E~~~~ 40 (426)
++|+|||+|..|.++|..|++.|+ +++++|+.+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~ 36 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAED 36 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChH
Confidence 379999999999999999999998 8999998764
No 396
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=93.72 E-value=0.061 Score=48.84 Aligned_cols=34 Identities=24% Similarity=0.431 Sum_probs=31.1
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCC--cEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGW--DVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~--~v~v~E~~~~ 40 (426)
++|+|||+|..|.++|..|++.|+ +++++|....
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~ 36 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDG 36 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchH
Confidence 379999999999999999999997 8999999775
No 397
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=93.68 E-value=0.067 Score=49.62 Aligned_cols=35 Identities=40% Similarity=0.589 Sum_probs=32.2
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCC-cEEEEcccC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGW-DVVVLEKAG 39 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~ 39 (426)
.+.+|+|+|||.||..+|..|...|. +|+++|++-
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 46799999999999999999999999 999999874
No 398
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=93.68 E-value=0.077 Score=48.80 Aligned_cols=35 Identities=20% Similarity=0.185 Sum_probs=31.6
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
..+|.|||.|..|.++|..|.+.|++|+++++++.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~ 42 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRS 42 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35899999999999999999999999999997654
No 399
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=93.61 E-value=0.055 Score=48.79 Aligned_cols=34 Identities=29% Similarity=0.446 Sum_probs=31.1
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
++|.|||+|..|...|..|.+.|++|.++++.+.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~ 39 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPE 39 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 5899999999999999999999999999988654
No 400
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=93.54 E-value=0.061 Score=49.09 Aligned_cols=33 Identities=36% Similarity=0.455 Sum_probs=30.3
Q ss_pred cEEEEcCChHHHHHHHHHHHcCC--cEEEEcccCC
Q 014324 8 KAVIVGGSIAGISCAHALLRAGW--DVVVLEKAGG 40 (426)
Q Consensus 8 ~V~IvGaG~aGl~~A~~L~~~G~--~v~v~E~~~~ 40 (426)
+|+|||+|-.|.++|..|++.|+ +|+++|+...
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~ 36 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKK 36 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChH
Confidence 69999999999999999999999 9999998653
No 401
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=93.52 E-value=0.076 Score=49.71 Aligned_cols=36 Identities=28% Similarity=0.338 Sum_probs=32.0
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
....|+|+|+|..|+.+|..++..|.+|+++|+...
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~ 202 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINID 202 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 346899999999999999999999999999987653
No 402
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=93.48 E-value=0.078 Score=51.27 Aligned_cols=35 Identities=17% Similarity=0.320 Sum_probs=31.9
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
+.+|.|||+|..|..+|..|+++|++|.++++.+.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~ 39 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTS 39 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998653
No 403
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=93.45 E-value=0.064 Score=48.39 Aligned_cols=35 Identities=23% Similarity=0.216 Sum_probs=31.6
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
.++|.|||+|-.|...|..|.+.|++|+++++.+.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~ 38 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEA 38 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999988653
No 404
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=93.44 E-value=0.073 Score=47.42 Aligned_cols=33 Identities=27% Similarity=0.323 Sum_probs=29.9
Q ss_pred cEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 8 KAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 8 ~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
+|.|||+|..|.++|..|.+.|++|+++++.+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~ 34 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQS 34 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 699999999999999999999999999987643
No 405
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.42 E-value=0.076 Score=49.57 Aligned_cols=36 Identities=28% Similarity=0.424 Sum_probs=32.0
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
....|+|+|+|..|+.+|..|+..|.+|+++|++..
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~ 200 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHK 200 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 346899999999999999999999999999987653
No 406
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=93.40 E-value=0.073 Score=50.60 Aligned_cols=34 Identities=18% Similarity=0.193 Sum_probs=31.7
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
.+|+|||.|-+||.+|..|++.|++|+.+|.++.
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~ 55 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPS 55 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHH
Confidence 5899999999999999999999999999998764
No 407
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=93.39 E-value=0.057 Score=51.97 Aligned_cols=35 Identities=29% Similarity=0.275 Sum_probs=31.9
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCCcEEEEccc
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKA 38 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~ 38 (426)
....+|+|||||.+|...+..|.+.|.+|+|+++.
T Consensus 10 l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 34578999999999999999999999999999975
No 408
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=93.35 E-value=0.072 Score=46.04 Aligned_cols=37 Identities=14% Similarity=0.159 Sum_probs=32.1
Q ss_pred CCCccEEEEcC-ChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 4 KEKGKAVIVGG-SIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 4 ~~~~~V~IvGa-G~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
+..+.|+|.|| |-.|..++..|.++|++|+++.|...
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 34578999998 99999999999999999999998754
No 409
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=93.29 E-value=0.067 Score=48.35 Aligned_cols=34 Identities=24% Similarity=0.349 Sum_probs=31.3
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
++|.|||+|-.|..+|..|++.|++|+++++.+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~ 37 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQS 37 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 4799999999999999999999999999988754
No 410
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=93.29 E-value=0.075 Score=45.13 Aligned_cols=33 Identities=21% Similarity=0.293 Sum_probs=30.1
Q ss_pred cEEEEc-CChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 8 KAVIVG-GSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 8 ~V~IvG-aG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
+|+||| +|-.|..+|..|.++|++|++++|...
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~ 35 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREE 35 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 699999 999999999999999999999988643
No 411
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=93.22 E-value=0.056 Score=51.08 Aligned_cols=32 Identities=19% Similarity=0.254 Sum_probs=29.6
Q ss_pred cEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 8 KAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 8 ~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
+|.|||+|-.|+.+|..|++ |++|+++++.+.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~ 33 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPS 33 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCHH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCHH
Confidence 69999999999999999999 999999998754
No 412
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=93.20 E-value=0.087 Score=48.02 Aligned_cols=35 Identities=20% Similarity=0.310 Sum_probs=31.4
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCC--cEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGW--DVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~--~v~v~E~~~~ 40 (426)
..+|+|||+|..|.++|..|+..|+ +++++|....
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~ 57 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVMED 57 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHH
Confidence 4689999999999999999999998 8999998554
No 413
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=93.18 E-value=0.089 Score=48.71 Aligned_cols=35 Identities=31% Similarity=0.397 Sum_probs=32.0
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCC-cEEEEccc
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGW-DVVVLEKA 38 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~ 38 (426)
....+|+|+|||-+|..+|..|...|. +|+++|+.
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 356799999999999999999999998 79999987
No 414
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=93.18 E-value=0.06 Score=48.57 Aligned_cols=35 Identities=29% Similarity=0.449 Sum_probs=28.0
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
.+|.+||-|..|..+|..|.++|++|+++++.+..
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~ 40 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASK 40 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC------
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 47999999999999999999999999999998764
No 415
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=93.16 E-value=0.088 Score=48.96 Aligned_cols=35 Identities=29% Similarity=0.450 Sum_probs=32.2
Q ss_pred cEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCC
Q 014324 8 KAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPP 42 (426)
Q Consensus 8 ~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~ 42 (426)
+|+|+|||..|..+|..+++.|++|+++|..+...
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~~ 37 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQAL 37 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCh
Confidence 69999999999999999999999999999877644
No 416
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=93.15 E-value=0.082 Score=47.55 Aligned_cols=33 Identities=15% Similarity=0.297 Sum_probs=30.6
Q ss_pred cEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 8 KAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 8 ~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
+|.|||+|-.|...|..|.+.|++|+++++.+.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 34 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPD 34 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTH
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 699999999999999999999999999998754
No 417
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=93.12 E-value=0.096 Score=50.88 Aligned_cols=35 Identities=11% Similarity=0.211 Sum_probs=32.4
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
..+|.|||+|..|..+|..|+++|++|+++++.+.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~ 44 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQS 44 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 36899999999999999999999999999998764
No 418
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=93.10 E-value=0.082 Score=46.63 Aligned_cols=33 Identities=15% Similarity=0.419 Sum_probs=30.0
Q ss_pred cEEEEcCChHHHHHHHHHHHcC-CcEEEEcccCC
Q 014324 8 KAVIVGGSIAGISCAHALLRAG-WDVVVLEKAGG 40 (426)
Q Consensus 8 ~V~IvGaG~aGl~~A~~L~~~G-~~v~v~E~~~~ 40 (426)
+|.|||+|-.|...|..|.+.| ++|.++++.+.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~ 35 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAE 35 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCHH
Confidence 6999999999999999999999 99999987643
No 419
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=93.06 E-value=0.09 Score=47.43 Aligned_cols=33 Identities=30% Similarity=0.390 Sum_probs=30.5
Q ss_pred ccEEEEc-CChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 7 GKAVIVG-GSIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 7 ~~V~IvG-aG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
.+|.||| +|-.|.++|..|++.|++|.++++..
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 3799999 99999999999999999999998764
No 420
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=93.06 E-value=0.084 Score=46.68 Aligned_cols=35 Identities=26% Similarity=0.391 Sum_probs=31.0
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCc-EEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWD-VVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~-v~v~E~~~~ 40 (426)
.++|.|||+|-.|...|..|++.|++ |.++++.+.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~ 45 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEE 45 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHH
Confidence 46899999999999999999999999 889987643
No 421
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=93.04 E-value=0.097 Score=43.89 Aligned_cols=34 Identities=26% Similarity=0.490 Sum_probs=31.4
Q ss_pred ccEEEEcC-ChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 7 GKAVIVGG-SIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGa-G~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
+.|+|.|| |-.|..++..|.++|++|+++.|++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh
Confidence 57999999 99999999999999999999998765
No 422
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=93.04 E-value=0.11 Score=46.11 Aligned_cols=35 Identities=14% Similarity=0.155 Sum_probs=31.0
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
....|+|+|+|-+|.++|..|++.|.+|+|++|..
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 34579999999999999999999999999997764
No 423
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=93.01 E-value=0.088 Score=47.56 Aligned_cols=34 Identities=35% Similarity=0.647 Sum_probs=30.2
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCC--cEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGW--DVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~--~v~v~E~~~~ 40 (426)
.+|.|||||-.|...|..|+.+|+ +++++|....
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSEG 50 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC--
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcc
Confidence 689999999999999999999998 9999999775
No 424
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=93.01 E-value=0.11 Score=47.71 Aligned_cols=36 Identities=17% Similarity=0.237 Sum_probs=31.3
Q ss_pred CCCccEEEEcC-ChHHHHHHHHHHHcCC--cEEEEcccC
Q 014324 4 KEKGKAVIVGG-SIAGISCAHALLRAGW--DVVVLEKAG 39 (426)
Q Consensus 4 ~~~~~V~IvGa-G~aGl~~A~~L~~~G~--~v~v~E~~~ 39 (426)
|...+|+|||+ |-.|.++|..|...|. +++++|...
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 44578999998 9999999999999985 899999754
No 425
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=93.00 E-value=0.099 Score=50.68 Aligned_cols=34 Identities=12% Similarity=0.255 Sum_probs=31.5
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
++|.|||+|..|..+|..|+++|++|.++++.+.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~ 36 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 36 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 5799999999999999999999999999998754
No 426
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=93.00 E-value=0.036 Score=48.09 Aligned_cols=34 Identities=24% Similarity=0.266 Sum_probs=30.6
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
+..|+|+|+|..|..+|..|.+.|+ |+++|+++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 4579999999999999999999999 999998765
No 427
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=92.99 E-value=0.066 Score=45.89 Aligned_cols=35 Identities=20% Similarity=0.395 Sum_probs=31.8
Q ss_pred ccEEEEcC-ChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 7 GKAVIVGG-SIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 7 ~~V~IvGa-G~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
++|+|.|| |-.|..++..|.++|++|+++.|.+..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 40 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEK 40 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCccc
Confidence 57999996 999999999999999999999998653
No 428
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=92.98 E-value=0.074 Score=49.75 Aligned_cols=34 Identities=12% Similarity=-0.029 Sum_probs=31.4
Q ss_pred ccEEEEcCChHHHHHHHHHHHcC-------CcEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAG-------WDVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G-------~~v~v~E~~~~ 40 (426)
++|.|||+|-.|.++|..|++.| .+|+++++.+.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 47999999999999999999999 99999998765
No 429
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=92.89 E-value=0.12 Score=45.09 Aligned_cols=34 Identities=6% Similarity=0.181 Sum_probs=30.8
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCC----cEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGW----DVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~----~v~v~E~~~~ 40 (426)
++|.|||+|-.|.+.|..|.++|+ +|.++++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~ 40 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTA 40 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHH
Confidence 479999999999999999999998 9999988654
No 430
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=92.80 E-value=0.1 Score=46.48 Aligned_cols=33 Identities=27% Similarity=0.371 Sum_probs=29.7
Q ss_pred cEEEEcCChHHHHHHHHHHHcCC--cEEEEcccCC
Q 014324 8 KAVIVGGSIAGISCAHALLRAGW--DVVVLEKAGG 40 (426)
Q Consensus 8 ~V~IvGaG~aGl~~A~~L~~~G~--~v~v~E~~~~ 40 (426)
+|.|||+|..|.++|..|++.|+ +|+++++.+.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~ 37 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPE 37 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHH
Confidence 69999999999999999999998 8999887643
No 431
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=92.79 E-value=0.22 Score=46.49 Aligned_cols=37 Identities=27% Similarity=0.362 Sum_probs=33.1
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
...+|+|+|+|..|..++..+++.|++|+++|..+..
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~ 47 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDC 47 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 3468999999999999999999999999999987654
No 432
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=92.78 E-value=0.12 Score=47.22 Aligned_cols=35 Identities=20% Similarity=0.458 Sum_probs=31.3
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCC--cEEEEcccC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGW--DVVVLEKAG 39 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~--~v~v~E~~~ 39 (426)
...+|+|||+|-.|.++|..|+.+|+ +++++|...
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 45789999999999999999999997 899999864
No 433
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=92.77 E-value=0.11 Score=50.34 Aligned_cols=34 Identities=21% Similarity=0.320 Sum_probs=31.0
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
++|.|||+|-.|..+|..|+++|++|+++++.+.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~ 35 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYS 35 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4799999999999999999999999999988653
No 434
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=92.76 E-value=0.13 Score=45.45 Aligned_cols=35 Identities=26% Similarity=0.344 Sum_probs=31.8
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
..+|+|+|+|-+|.++|..|++.|.+|+|+.|...
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35799999999999999999999999999988765
No 435
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=92.73 E-value=0.11 Score=49.96 Aligned_cols=36 Identities=22% Similarity=0.434 Sum_probs=32.1
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCC-cEEEEcccCCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGW-DVVVLEKAGGP 41 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~~~ 41 (426)
..+|+|||||.+|+-+|..+.+.|. +|+++++++..
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 3589999999999999999999998 49999998764
No 436
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=92.68 E-value=0.096 Score=47.52 Aligned_cols=33 Identities=30% Similarity=0.414 Sum_probs=30.1
Q ss_pred cEEEEcCChHHHHHHHHHHHcC--CcEEEEcccCC
Q 014324 8 KAVIVGGSIAGISCAHALLRAG--WDVVVLEKAGG 40 (426)
Q Consensus 8 ~V~IvGaG~aGl~~A~~L~~~G--~~v~v~E~~~~ 40 (426)
+|+|||+|-.|.++|..|+++| .+|+++|+...
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~ 37 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEA 37 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHH
Confidence 7999999999999999999999 68999998653
No 437
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=92.67 E-value=0.13 Score=47.24 Aligned_cols=35 Identities=31% Similarity=0.345 Sum_probs=31.5
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
..+|.|||+|-.|.+.|..|++.|++|+++++...
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~ 50 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGS 50 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTC
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECChH
Confidence 35799999999999999999999999999988754
No 438
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=92.57 E-value=0.13 Score=46.55 Aligned_cols=36 Identities=33% Similarity=0.428 Sum_probs=32.6
Q ss_pred CCccEEEEcC-ChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 5 EKGKAVIVGG-SIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 5 ~~~~V~IvGa-G~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
...+|+|.|| |-.|..++..|.++|++|+++.|...
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 3568999999 99999999999999999999999876
No 439
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=92.57 E-value=0.11 Score=46.60 Aligned_cols=36 Identities=22% Similarity=0.307 Sum_probs=30.4
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHc--CCcEEEEcccC
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRA--GWDVVVLEKAG 39 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~--G~~v~v~E~~~ 39 (426)
|+.++|.|||+|-.|.++|..|++. |.+|.++++.+
T Consensus 4 M~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 4 MEEKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp GCCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred cccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 3346899999999999999999988 57898888754
No 440
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=92.56 E-value=0.08 Score=48.51 Aligned_cols=35 Identities=14% Similarity=0.112 Sum_probs=30.8
Q ss_pred CCCccEEEEcC-ChHHHHHHHHHHHcCC-------cEEEEccc
Q 014324 4 KEKGKAVIVGG-SIAGISCAHALLRAGW-------DVVVLEKA 38 (426)
Q Consensus 4 ~~~~~V~IvGa-G~aGl~~A~~L~~~G~-------~v~v~E~~ 38 (426)
+++++|+|+|| |-.|.+++..|...|+ +++++|..
T Consensus 3 ~~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 3 KTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred CCCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence 35579999998 9999999999999886 79999876
No 441
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=92.53 E-value=0.067 Score=50.63 Aligned_cols=30 Identities=23% Similarity=0.265 Sum_probs=28.0
Q ss_pred ccEEEEcCChHHHHHHHHHHH-cCCcEEEEc
Q 014324 7 GKAVIVGGSIAGISCAHALLR-AGWDVVVLE 36 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~-~G~~v~v~E 36 (426)
++|+|||+|-.|.++|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 479999999999999999998 599999998
No 442
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=92.52 E-value=0.12 Score=47.10 Aligned_cols=36 Identities=25% Similarity=0.420 Sum_probs=31.4
Q ss_pred CCCccEEEEcCChHHHHHHHHHHHcCC--cEEEEcccC
Q 014324 4 KEKGKAVIVGGSIAGISCAHALLRAGW--DVVVLEKAG 39 (426)
Q Consensus 4 ~~~~~V~IvGaG~aGl~~A~~L~~~G~--~v~v~E~~~ 39 (426)
+++++|+|||||-.|.++|..|+..++ +++++|...
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~ 44 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 455799999999999999999998886 799999854
No 443
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=92.47 E-value=0.099 Score=46.76 Aligned_cols=32 Identities=22% Similarity=0.276 Sum_probs=29.3
Q ss_pred cEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 8 KAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 8 ~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
+|.|||+|..|...|..|.+ |++|+++++.+.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~ 34 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFE 34 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSSTH
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHH
Confidence 69999999999999999999 999999987654
No 444
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=92.46 E-value=0.3 Score=46.08 Aligned_cols=38 Identities=8% Similarity=0.121 Sum_probs=28.9
Q ss_pred Ce-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEEeccCCch
Q 014324 123 EI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLVAADGCLS 171 (426)
Q Consensus 123 ~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI~AdG~~S 171 (426)
|+ ++.++++++++ .+ .|+ +++|++ +++|+||.|.|...
T Consensus 232 gV~~~~~~~v~~i~--~~--~v~-----~~~g~~--~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 232 GIKLVHNFKIKEIR--EH--EIV-----DEKGNT--IPADITILLPPYTG 270 (409)
T ss_dssp TCEEECSCCEEEEC--SS--EEE-----ETTSCE--EECSEEEEECCEEC
T ss_pred CCEEEcCCceEEEC--CC--eEE-----ECCCCE--EeeeEEEECCCCCc
Confidence 67 88899998886 33 233 567775 89999999999754
No 445
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=92.37 E-value=0.14 Score=46.19 Aligned_cols=35 Identities=9% Similarity=0.160 Sum_probs=31.1
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCC-cEEEEcccC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGW-DVVVLEKAG 39 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~ 39 (426)
...+|+|+|+|.+|.++|..|.+.|. +|+|+.|..
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 34679999999999999999999998 899998764
No 446
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=92.34 E-value=0.12 Score=50.06 Aligned_cols=100 Identities=18% Similarity=0.191 Sum_probs=71.1
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhcCCchhhhccCcceeecccc
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLNGRPHLLHLATVPLTIDQNQ 85 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (426)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+.+.. . +.+..
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~------~--~~~~~---------------------------- 234 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILR------N--FDYDL---------------------------- 234 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST------T--SCHHH----------------------------
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcccc------c--cCHHH----------------------------
Confidence 35899999999999999999999999999999876421 0 00000
Q ss_pred ccccccccccccccCCCcchhccHHHHHHHHHhcCCCCe-eEeeeeEEEEEEecCCceEEEEEEeccCCceEEEeecEEE
Q 014324 86 ATDNAKVTRTLARDDNFNFRAAHWADLHGLLYNALPPEI-FLRGHQYLSFCISEVKTTVTVKAKVLQTDEVIEIKGNLLV 164 (426)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~~~~~~~~~~v~v~~~~~~~g~~~~~~~d~vI 164 (426)
...+.+.|.+ .|+ ++.+++|.+++.+++ .+.++ +.+|+. +.+|.||
T Consensus 235 -----------------------~~~l~~~l~~---~Gv~i~~~~~V~~i~~~~~--~v~v~---~~~g~~--i~aD~Vi 281 (484)
T 3o0h_A 235 -----------------------RQLLNDAMVA---KGISIIYEATVSQVQSTEN--CYNVV---LTNGQT--ICADRVM 281 (484)
T ss_dssp -----------------------HHHHHHHHHH---HTCEEESSCCEEEEEECSS--SEEEE---ETTSCE--EEESEEE
T ss_pred -----------------------HHHHHHHHHH---CCCEEEeCCEEEEEEeeCC--EEEEE---ECCCcE--EEcCEEE
Confidence 0112233322 377 999999999985433 45555 567764 8999999
Q ss_pred eccCCchhhh
Q 014324 165 AADGCLSSIR 174 (426)
Q Consensus 165 ~AdG~~S~vR 174 (426)
.|.|..+...
T Consensus 282 ~A~G~~p~~~ 291 (484)
T 3o0h_A 282 LATGRVPNTT 291 (484)
T ss_dssp ECCCEEECCT
T ss_pred EeeCCCcCCC
Confidence 9999876654
No 447
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=92.31 E-value=0.15 Score=48.79 Aligned_cols=35 Identities=37% Similarity=0.396 Sum_probs=31.6
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
....|+|+|+|..|..+|..|+..|.+|+++|+.+
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 34679999999999999999999999999998764
No 448
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=92.30 E-value=0.16 Score=45.70 Aligned_cols=36 Identities=19% Similarity=0.245 Sum_probs=32.1
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
...+|.|||+|..|..+|..|+..|.+|+++++...
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~ 189 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARESD 189 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 346899999999999999999999999999998653
No 449
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=92.30 E-value=0.14 Score=46.61 Aligned_cols=35 Identities=29% Similarity=0.475 Sum_probs=30.8
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCC--cEEEEcccC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGW--DVVVLEKAG 39 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~--~v~v~E~~~ 39 (426)
++++|+|||||-.|.++|..|...++ +++++|...
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 40 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVK 40 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 34799999999999999999999886 799999854
No 450
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=92.23 E-value=0.16 Score=45.81 Aligned_cols=35 Identities=17% Similarity=0.281 Sum_probs=31.7
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
...+|.|||+|..|..+|..|...|.+|+++++..
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 34689999999999999999999999999999865
No 451
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=92.22 E-value=0.11 Score=46.29 Aligned_cols=34 Identities=18% Similarity=0.351 Sum_probs=31.2
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
++|+|.|||..|..++..|.++|++|+++.|...
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChh
Confidence 5799999999999999999999999999988654
No 452
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=92.20 E-value=0.13 Score=45.41 Aligned_cols=36 Identities=14% Similarity=0.160 Sum_probs=30.7
Q ss_pred CCCccEEEEcC---ChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 4 KEKGKAVIVGG---SIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 4 ~~~~~V~IvGa---G~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
+....|+|.|| |-.|..+|..|+++|.+|++++|..
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 45 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND 45 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH
Confidence 44456899998 5899999999999999999998865
No 453
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=92.16 E-value=0.15 Score=43.24 Aligned_cols=33 Identities=24% Similarity=0.357 Sum_probs=30.2
Q ss_pred cEEEEcC-ChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 8 KAVIVGG-SIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 8 ~V~IvGa-G~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
+|+|.|| |-.|..++..|.++|++|+++.|++.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 35 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAG 35 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSH
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCch
Confidence 6999996 99999999999999999999998754
No 454
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=92.13 E-value=6.1 Score=38.03 Aligned_cols=61 Identities=8% Similarity=0.030 Sum_probs=40.1
Q ss_pred HHHHHHHHhcCCCCeeEeeeeEEEEEEecCCc----eEEEEEEeccCCce-EEEeecEEEeccCCch
Q 014324 110 ADLHGLLYNALPPEIFLRGHQYLSFCISEVKT----TVTVKAKVLQTDEV-IEIKGNLLVAADGCLS 171 (426)
Q Consensus 110 ~~l~~~L~~~~~~~~i~~~~~v~~~~~~~~~~----~v~v~~~~~~~g~~-~~~~~d~vI~AdG~~S 171 (426)
..|-+.|.+.+.++.|+++++|++|..++++. .+.|++. ..+|+. .+++||.||.|.....
T Consensus 243 ~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~-~~~g~~~~~~~ad~VI~a~p~~~ 308 (504)
T 1sez_A 243 QTLTDAICKDLREDELRLNSRVLELSCSCTEDSAIDSWSIISA-SPHKRQSEEESFDAVIMTAPLCD 308 (504)
T ss_dssp HHHHHHHHTTSCTTTEETTCCEEEEEEECSSSSSSCEEEEEEB-CSSSSCBCCCEESEEEECSCHHH
T ss_pred HHHHHHHHhhcccceEEcCCeEEEEEecCCCCcccceEEEEEc-CCCCccceeEECCEEEECCCHHH
Confidence 45666676666443399999999999765541 1555532 234532 2478999999998754
No 455
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=92.13 E-value=0.14 Score=52.14 Aligned_cols=34 Identities=29% Similarity=0.482 Sum_probs=31.8
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
.+|.|||+|..|...|..|+++|++|+++|+++.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 346 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEK 346 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHH
Confidence 4799999999999999999999999999998865
No 456
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=92.00 E-value=0.15 Score=47.41 Aligned_cols=40 Identities=18% Similarity=0.361 Sum_probs=32.6
Q ss_pred CCCCCccEEEEcC-ChHHHHHHHHHHHc-CCcEEEEcccCCC
Q 014324 2 EKKEKGKAVIVGG-SIAGISCAHALLRA-GWDVVVLEKAGGP 41 (426)
Q Consensus 2 ~~~~~~~V~IvGa-G~aGl~~A~~L~~~-G~~v~v~E~~~~~ 41 (426)
..|..++|+|.|| |..|..++..|.++ |++|+++.|....
T Consensus 20 ~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 61 (372)
T 3slg_A 20 GSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDR 61 (372)
T ss_dssp ---CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTT
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhh
Confidence 3345568999995 99999999999998 9999999997653
No 457
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=91.96 E-value=0.21 Score=43.75 Aligned_cols=40 Identities=23% Similarity=0.199 Sum_probs=33.0
Q ss_pred CCCCCCccEEEEcC-ChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 1 MEKKEKGKAVIVGG-SIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 1 m~~~~~~~V~IvGa-G~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
|+.+....|+|.|| |-.|..+|..|+++|.+|+++++...
T Consensus 1 M~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 41 (256)
T 2d1y_A 1 MGLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE 41 (256)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 67666677889887 56899999999999999999988754
No 458
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=91.95 E-value=0.13 Score=45.67 Aligned_cols=34 Identities=18% Similarity=0.293 Sum_probs=30.9
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
..+|+|||+|-+|.++|..|.+.|.+|++++|..
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4579999999999999999999999999998764
No 459
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=91.93 E-value=0.12 Score=45.47 Aligned_cols=30 Identities=20% Similarity=0.155 Sum_probs=27.9
Q ss_pred cEEEEcCChHHHHHHHHHHHcCCcEEEEcc
Q 014324 8 KAVIVGGSIAGISCAHALLRAGWDVVVLEK 37 (426)
Q Consensus 8 ~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~ 37 (426)
+|.|||+|-.|..+|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 699999999999999999999999999765
No 460
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=91.92 E-value=0.21 Score=43.26 Aligned_cols=38 Identities=18% Similarity=0.205 Sum_probs=32.0
Q ss_pred CCCCCccEEEEcC-ChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 2 EKKEKGKAVIVGG-SIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 2 ~~~~~~~V~IvGa-G~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
|.+....|+|.|| |-.|..+|..|+++|.+|+++.|..
T Consensus 3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~ 41 (244)
T 3d3w_A 3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ 41 (244)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4445567999998 7899999999999999999998754
No 461
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=91.91 E-value=0.17 Score=44.85 Aligned_cols=40 Identities=18% Similarity=0.114 Sum_probs=33.1
Q ss_pred CCCCCCccEEEEcC---ChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 1 MEKKEKGKAVIVGG---SIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 1 m~~~~~~~V~IvGa---G~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
|..+....|+|.|| |-.|..+|..|+++|.+|+++.|+..
T Consensus 1 M~~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~ 43 (275)
T 2pd4_A 1 MGFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES 43 (275)
T ss_dssp -CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred CCCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 55455567999998 58999999999999999999988763
No 462
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=91.85 E-value=0.16 Score=45.92 Aligned_cols=33 Identities=24% Similarity=0.555 Sum_probs=29.8
Q ss_pred cEEEEcCChHHHHHHHHHHHcCC-cEEEEcccCC
Q 014324 8 KAVIVGGSIAGISCAHALLRAGW-DVVVLEKAGG 40 (426)
Q Consensus 8 ~V~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~~ 40 (426)
+|+|||||-.|.++|..|+..|+ +++++|....
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~ 34 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPG 34 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTT
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChh
Confidence 58999999999999999999898 6999998754
No 463
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=91.81 E-value=0.16 Score=50.32 Aligned_cols=58 Identities=14% Similarity=0.098 Sum_probs=42.1
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCCCCCCCcceeccChhHHHHHHHHhc
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPPTGSPTGAGLGLDRPAQRIIQSWLN 66 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~ 66 (426)
..|+|||+|..|..+|..|.+.|++|+++|+++..-.. ....+.-.+...+.|++.|+
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~~--~~~~i~gD~t~~~~L~~agi 406 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVCN--DHVVVYGDATVGQTLRQAGI 406 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSCC--SSCEEESCSSSSTHHHHHTT
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHhh--cCCEEEeCCCCHHHHHhcCc
Confidence 57999999999999999999999999999999875431 11222222333345666655
No 464
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=91.80 E-value=0.18 Score=47.62 Aligned_cols=35 Identities=26% Similarity=0.300 Sum_probs=31.5
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
...+|+|+|+|..|..++..+++.|++|++++ .+.
T Consensus 23 ~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~~ 57 (403)
T 3k5i_A 23 NSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-ADN 57 (403)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-STT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CCC
Confidence 35689999999999999999999999999999 543
No 465
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=91.80 E-value=0.15 Score=45.69 Aligned_cols=36 Identities=22% Similarity=0.221 Sum_probs=32.0
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCC-cEEEEcccCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGW-DVVVLEKAGG 40 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~~ 40 (426)
...+|+|||+|-.|..+|..|++.|+ +++|+|...-
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~V 71 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKV 71 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 34689999999999999999999997 7999998764
No 466
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=91.78 E-value=0.19 Score=45.03 Aligned_cols=34 Identities=21% Similarity=0.430 Sum_probs=31.2
Q ss_pred ccEEEEcC-ChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 7 GKAVIVGG-SIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGa-G~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
++|+|.|| |..|..++..|.++|++|+++-|++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 46999999 99999999999999999999988765
No 467
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=91.74 E-value=0.19 Score=46.92 Aligned_cols=38 Identities=13% Similarity=0.090 Sum_probs=34.4
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCCCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGGPP 42 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~ 42 (426)
...+++|+|||..|.++|..++..|++|+|+|.++...
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~~ 240 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFA 240 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTTS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhc
Confidence 45689999999999999999999999999999887753
No 468
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=91.71 E-value=0.18 Score=46.24 Aligned_cols=38 Identities=16% Similarity=0.170 Sum_probs=31.7
Q ss_pred CCCccEEEEcC-ChHHHHHHHHHHHcCCcEEEEcccCCC
Q 014324 4 KEKGKAVIVGG-SIAGISCAHALLRAGWDVVVLEKAGGP 41 (426)
Q Consensus 4 ~~~~~V~IvGa-G~aGl~~A~~L~~~G~~v~v~E~~~~~ 41 (426)
.....|+|.|| |-.|..++..|.++|++|+++.|....
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~ 55 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG 55 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC
Confidence 34578999999 999999999999999999999998753
No 469
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=91.66 E-value=0.17 Score=45.82 Aligned_cols=34 Identities=24% Similarity=0.405 Sum_probs=30.8
Q ss_pred ccEEEEcC-ChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 7 GKAVIVGG-SIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGa-G~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
..|+|.|| |-.|..++..|.++|++|+++.|...
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 46 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS 46 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCC
Confidence 37999997 99999999999999999999998764
No 470
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=91.66 E-value=0.13 Score=47.35 Aligned_cols=39 Identities=13% Similarity=0.326 Sum_probs=30.1
Q ss_pred CCCCCCccEEEEcC-ChHHHHHHHHHHHcC--CcEEEEcccC
Q 014324 1 MEKKEKGKAVIVGG-SIAGISCAHALLRAG--WDVVVLEKAG 39 (426)
Q Consensus 1 m~~~~~~~V~IvGa-G~aGl~~A~~L~~~G--~~v~v~E~~~ 39 (426)
||.+..++|+|.|| |..|..++..|.++| ++|+++++..
T Consensus 19 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~ 60 (346)
T 4egb_A 19 YFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALT 60 (346)
T ss_dssp -----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCC
T ss_pred ccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccc
Confidence 44456678999999 999999999999999 7787887765
No 471
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=91.62 E-value=0.15 Score=44.85 Aligned_cols=37 Identities=19% Similarity=0.170 Sum_probs=31.4
Q ss_pred CCCccEEEEcC-C-hHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 4 KEKGKAVIVGG-S-IAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 4 ~~~~~V~IvGa-G-~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
+....|+|.|| | -.|..+|..|+++|.+|+++++...
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~ 58 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHER 58 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHH
Confidence 44567999999 7 4999999999999999999987653
No 472
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=91.61 E-value=0.18 Score=42.89 Aligned_cols=33 Identities=21% Similarity=0.337 Sum_probs=30.2
Q ss_pred cEEEEcC-ChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 8 KAVIVGG-SIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 8 ~V~IvGa-G~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
+|+|.|| |-.|..++..|.++|++|+++.|...
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 35 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQ 35 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccc
Confidence 5999998 99999999999999999999988753
No 473
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=91.54 E-value=0.13 Score=45.67 Aligned_cols=35 Identities=17% Similarity=0.177 Sum_probs=31.7
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCC-cEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGW-DVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~~ 40 (426)
..+|+|+|+|-+|.++|..|++.|. +|+|+.|...
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 4579999999999999999999998 8999988765
No 474
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=91.53 E-value=0.16 Score=51.79 Aligned_cols=34 Identities=18% Similarity=0.208 Sum_probs=31.8
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
.+|.|||+|..|...|..|+++|++|+++|+++.
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 348 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINEH 348 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCHH
Confidence 4799999999999999999999999999998865
No 475
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=91.52 E-value=0.15 Score=45.23 Aligned_cols=35 Identities=20% Similarity=0.238 Sum_probs=31.3
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
..+|+|+|+|-+|.++|..|++.|.+|+|+.|...
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~ 153 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFS 153 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 45799999999999999999999999999987653
No 476
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=91.49 E-value=0.14 Score=48.09 Aligned_cols=35 Identities=29% Similarity=0.269 Sum_probs=31.7
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
....|+|||.|+.|..+|..|...|.+|+++|+.+
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 34689999999999999999999999999999765
No 477
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=91.46 E-value=0.15 Score=44.84 Aligned_cols=34 Identities=12% Similarity=0.081 Sum_probs=30.6
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
++|.|||+|-.|...|..|.+.|.+|.++++.+.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~ 37 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSLE 37 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHH
Confidence 5799999999999999999999999999987653
No 478
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=91.44 E-value=0.2 Score=48.39 Aligned_cols=36 Identities=31% Similarity=0.268 Sum_probs=32.1
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
....|+|||+|..|..+|..|+..|.+|+++|+.+.
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~ 308 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPI 308 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 345799999999999999999999999999998654
No 479
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=91.40 E-value=0.21 Score=43.88 Aligned_cols=40 Identities=23% Similarity=0.182 Sum_probs=34.0
Q ss_pred CCCCCCccEEEEcCC---hHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 1 MEKKEKGKAVIVGGS---IAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 1 m~~~~~~~V~IvGaG---~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
|++.+...++|-||+ =.|.+.|..|+++|.+|++.+|+..
T Consensus 1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~ 43 (256)
T 4fs3_A 1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKER 43 (256)
T ss_dssp CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHH
Confidence 788888889999964 3689999999999999999988753
No 480
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=91.38 E-value=0.2 Score=45.76 Aligned_cols=35 Identities=17% Similarity=0.330 Sum_probs=31.7
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCC-cEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGW-DVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~~ 40 (426)
..+|+|||+|-.|..+|..|++.|+ +++|+|...-
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~V 69 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 69 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEe
Confidence 5689999999999999999999998 6889988764
No 481
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=91.30 E-value=0.12 Score=46.42 Aligned_cols=33 Identities=33% Similarity=0.325 Sum_probs=30.0
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
++|.|||+|-.|...|..|.+.|++|++++ ++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~ 36 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGP 36 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHH
Confidence 479999999999999999999999999998 543
No 482
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=91.15 E-value=0.22 Score=46.00 Aligned_cols=36 Identities=25% Similarity=0.432 Sum_probs=30.4
Q ss_pred CCccEEEEcC-ChHHHHHHHHHHHcC-CcEEEEcccCC
Q 014324 5 EKGKAVIVGG-SIAGISCAHALLRAG-WDVVVLEKAGG 40 (426)
Q Consensus 5 ~~~~V~IvGa-G~aGl~~A~~L~~~G-~~v~v~E~~~~ 40 (426)
..+.|+|.|| |..|..++..|.++| .+|+++.+...
T Consensus 45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~ 82 (357)
T 2x6t_A 45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD 82 (357)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCC
Confidence 4468999999 999999999999999 99999988654
No 483
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=91.15 E-value=0.19 Score=43.95 Aligned_cols=35 Identities=23% Similarity=0.261 Sum_probs=31.4
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCC-cEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGW-DVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~~ 40 (426)
..+|+|||+|-.|..+|..|++.|+ +++|+|...-
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v 63 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDV 63 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 4689999999999999999999998 7889988764
No 484
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=90.49 E-value=0.04 Score=46.58 Aligned_cols=35 Identities=26% Similarity=0.347 Sum_probs=31.7
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
.++|.|||+|-.|.++|..|.+.|++|++++|...
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~ 53 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ 53 (201)
Confidence 45799999999999999999999999999988765
No 485
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=91.08 E-value=0.21 Score=44.00 Aligned_cols=39 Identities=23% Similarity=0.393 Sum_probs=30.2
Q ss_pred CCCCCccEEEEcC-ChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 2 EKKEKGKAVIVGG-SIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 2 ~~~~~~~V~IvGa-G~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
|.+....|+|.|| |-.|.++|..|+++|.+|+++++...
T Consensus 23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~ 62 (260)
T 3gem_A 23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEH 62 (260)
T ss_dssp ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChH
Confidence 4445567888887 56899999999999999999998764
No 486
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=91.08 E-value=0.22 Score=44.37 Aligned_cols=39 Identities=23% Similarity=0.143 Sum_probs=31.3
Q ss_pred CCCCCCccEEEEcC-Ch--HHHHHHHHHHHcCCcEEEEcccC
Q 014324 1 MEKKEKGKAVIVGG-SI--AGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 1 m~~~~~~~V~IvGa-G~--aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
|+.+....|+|.|| |. .|..+|..|+++|.+|+++.+..
T Consensus 21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch
Confidence 44455567888886 45 89999999999999999998876
No 487
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=91.07 E-value=0.24 Score=43.40 Aligned_cols=33 Identities=30% Similarity=0.360 Sum_probs=30.4
Q ss_pred cEEEEcCChHHHHHHHHHHHcCC-cEEEEcccCC
Q 014324 8 KAVIVGGSIAGISCAHALLRAGW-DVVVLEKAGG 40 (426)
Q Consensus 8 ~V~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~~ 40 (426)
+|+|+|+|-+|.+++..|.+.|. +|+|+.|...
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ 143 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIE 143 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHH
Confidence 89999999999999999999998 8999988754
No 488
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=91.04 E-value=0.2 Score=44.88 Aligned_cols=34 Identities=21% Similarity=0.162 Sum_probs=29.8
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCC--cEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGW--DVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~--~v~v~E~~~~ 40 (426)
++|.|||+|-.|.++|+.|..++. +++++|....
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~ 36 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAED 36 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCC
Confidence 479999999999999999998885 7999998653
No 489
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=90.99 E-value=0.3 Score=44.76 Aligned_cols=35 Identities=11% Similarity=0.051 Sum_probs=32.0
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
..+|.|||.|-.|..+|..|+..|++|+++++...
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~ 184 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRK 184 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcc
Confidence 45799999999999999999999999999998764
No 490
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=90.95 E-value=0.27 Score=44.20 Aligned_cols=36 Identities=25% Similarity=0.221 Sum_probs=30.8
Q ss_pred CCCccEEEEcCC---hHHHHHHHHHHHcCCcEEEEcccC
Q 014324 4 KEKGKAVIVGGS---IAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 4 ~~~~~V~IvGaG---~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
+....|+|.||+ -.|..+|..|+++|.+|++.++..
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~ 66 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSE 66 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCCh
Confidence 445679999986 789999999999999999998874
No 491
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=90.88 E-value=0.23 Score=46.82 Aligned_cols=35 Identities=23% Similarity=0.370 Sum_probs=30.8
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCC-cEEEEcccC
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGW-DVVVLEKAG 39 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~ 39 (426)
....|+|||+|..|..+|..|...|. +|+++++..
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 34679999999999999999999998 899988754
No 492
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=90.87 E-value=0.18 Score=47.84 Aligned_cols=34 Identities=21% Similarity=0.305 Sum_probs=31.8
Q ss_pred ccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 7 GKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 7 ~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
.+.-|||.|-.|+.+|..|+++|++|+++|+++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 4788999999999999999999999999999875
No 493
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=90.86 E-value=0.29 Score=42.26 Aligned_cols=37 Identities=22% Similarity=0.270 Sum_probs=31.7
Q ss_pred CCCCccEEEEcC-ChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 3 KKEKGKAVIVGG-SIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 3 ~~~~~~V~IvGa-G~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
.+....|+|.|| |-.|..+|..|+++|.+|++++|..
T Consensus 4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~ 41 (244)
T 1cyd_A 4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTN 41 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 355567999998 7899999999999999999998754
No 494
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=90.77 E-value=0.25 Score=43.64 Aligned_cols=39 Identities=15% Similarity=0.121 Sum_probs=31.5
Q ss_pred CCC-CCCccEEEEcC---ChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 1 MEK-KEKGKAVIVGG---SIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 1 m~~-~~~~~V~IvGa---G~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
||. +....|+|.|| |-.|.++|..|+++|.+|++++++.
T Consensus 1 Mm~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~ 43 (269)
T 2h7i_A 1 MTGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR 43 (269)
T ss_dssp -CCTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSC
T ss_pred CccccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCh
Confidence 443 45567999995 7889999999999999999998764
No 495
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=90.77 E-value=0.26 Score=43.47 Aligned_cols=32 Identities=34% Similarity=0.451 Sum_probs=29.8
Q ss_pred cEEEEcCChHHHHHHHHHHHcCCcEEEEcccC
Q 014324 8 KAVIVGGSIAGISCAHALLRAGWDVVVLEKAG 39 (426)
Q Consensus 8 ~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 39 (426)
+|+|||+|-+|.+.|..|.+.|.+|++++|..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 89999999999999999999999999998764
No 496
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=90.74 E-value=0.28 Score=45.40 Aligned_cols=33 Identities=18% Similarity=0.099 Sum_probs=30.2
Q ss_pred CCccEEEEcCChHHHHHHHHHHHcCCcEEEEcc
Q 014324 5 EKGKAVIVGGSIAGISCAHALLRAGWDVVVLEK 37 (426)
Q Consensus 5 ~~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~ 37 (426)
....|+|+|+|-.|..+|..|.+.|.+|++.|+
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~ 204 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDV 204 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEcC
Confidence 456899999999999999999999999999884
No 497
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=90.71 E-value=0.22 Score=46.27 Aligned_cols=34 Identities=18% Similarity=0.337 Sum_probs=31.9
Q ss_pred CccEEEEcC-ChHHHHHHHHHHHcCC---cEEEEcccC
Q 014324 6 KGKAVIVGG-SIAGISCAHALLRAGW---DVVVLEKAG 39 (426)
Q Consensus 6 ~~~V~IvGa-G~aGl~~A~~L~~~G~---~v~v~E~~~ 39 (426)
..+|+|||| |.+|+.++..+...|. +|+++|.+.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~ 251 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKE 251 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHH
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccc
Confidence 568999999 9999999999999998 999999987
No 498
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=90.66 E-value=0.19 Score=45.67 Aligned_cols=32 Identities=16% Similarity=0.162 Sum_probs=29.3
Q ss_pred cEEEEcC-ChHHHHHHHHHHHcC--CcEEEEcccC
Q 014324 8 KAVIVGG-SIAGISCAHALLRAG--WDVVVLEKAG 39 (426)
Q Consensus 8 ~V~IvGa-G~aGl~~A~~L~~~G--~~v~v~E~~~ 39 (426)
+|+|||| |-.|.++|..|+..| .+++++|...
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 7999998 999999999999988 5899999876
No 499
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=90.60 E-value=0.25 Score=45.50 Aligned_cols=35 Identities=17% Similarity=0.121 Sum_probs=30.5
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCCcEEEEcccCC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGWDVVVLEKAGG 40 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 40 (426)
.-.|+|+|+|+.|++++..++..|.+|+++++.+.
T Consensus 177 g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~ 211 (348)
T 3two_A 177 GTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEH 211 (348)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 34799999999999999999889999999887664
No 500
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=90.55 E-value=0.28 Score=44.38 Aligned_cols=34 Identities=15% Similarity=0.198 Sum_probs=30.7
Q ss_pred CccEEEEcCChHHHHHHHHHHHcCC-cEEEEcccC
Q 014324 6 KGKAVIVGGSIAGISCAHALLRAGW-DVVVLEKAG 39 (426)
Q Consensus 6 ~~~V~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~ 39 (426)
..+|+|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRKD 188 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC
Confidence 4579999999999999999999998 899998874
Done!