BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014325
(426 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1D5R|A Chain A, Crystal Structure Of The Pten Tumor Suppressor
Length = 324
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 122/176 (69%), Gaps = 2/176 (1%)
Query: 39 LVSKKRRRMLVEGYDLDMSYITDRLLAMSFPAEHMRAVYRNPLWQVKAVLDMRHQEHYKV 98
+VS+ +RR +G+DLD++YI ++AM FPAE + VYRN + V LD +H+ HYK+
Sbjct: 2 IVSRNKRRYQEDGFDLDLTYIYPNIIAMGFPAERLEGVYRNNIDDVVRFLDSKHKNHYKI 61
Query: 99 YNLCIEETYDPEHFYSRVERYPFDDNHVPPLEMIKLLCESVHSWLSSDPKNIAVIHCMAG 158
YNLC E YD F RV +YPF+D++ P LE+IK CE + WLS D ++A IHC AG
Sbjct: 62 YNLCAERHYDTAKFNCRVAQYPFEDHNPPQLELIKPFCEDLDQWLSEDDNHVAAIHCKAG 121
Query: 159 KGRTGLMVCSYLVYTG--MSAEEALQLYAHKRTTNNEGVSIPSQRRYVGYWNNIIS 212
KGRTG+M+C+YL++ G + A+EAL Y RT + +GV+IPSQRRYV Y++ ++
Sbjct: 122 KGRTGVMICAYLLHRGKFLKAQEALDFYGEVRTRDKKGVTIPSQRRYVYYYSYLLK 177
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 15/82 (18%)
Query: 331 FDKPLQVSGDVRVIFYQK----MIGSRFFYACFNTAFIRNS----------MLQFSIRDL 376
F +PL V GD++V F+ K + + F+ NT FI +L + DL
Sbjct: 237 FPQPLPVCGDIKVEFFHKQNKMLKKDKMFHFWVNTFFIPGPEEVDNDKEYLVLTLTKNDL 296
Query: 377 DKVG-SRGRSICGPSFCLELLF 397
DK + P+F ++L F
Sbjct: 297 DKANKDKANRYFSPNFKVKLYF 318
>pdb|3V0J|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Deletion Of 401-405
pdb|3V0J|B Chain B, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Deletion Of 401-405
Length = 334
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 109/176 (61%), Gaps = 2/176 (1%)
Query: 37 RNLVSKKRRRMLVEGYDLDMSYITDRLLAMSFPAEHMRAVYRNPLWQVKAVLDMRHQEHY 96
R +S+ +RR +G+DLD++Y+TD ++AMSFP+ ++++RNP+ +V +H + +
Sbjct: 8 RRTISQNKRRYRKDGFDLDLTYVTDHVIAMSFPSSGRQSLFRNPIGEVSRFFKTKHPDKF 67
Query: 97 KVYNLCIEETYDPEHFYSRVERYPFDDNHVPPLEMIKLLCESVHSWLSSDPKNIAVIHCM 156
++YNLC E YD F + V R DD++VP L + + W++SDP ++ IH
Sbjct: 68 RIYNLCSERGYDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDAKVWMTSDPDHVIAIHSK 127
Query: 157 AGKGRTGLMVCSYLVYTGM--SAEEALQLYAHKRTTNNEGVSIPSQRRYVGYWNNI 210
GKGRTG +V S+L+ G +A+EAL+ + +RT +GV SQ RYVGY+ I
Sbjct: 128 GGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRTDVFQGVETASQIRYVGYFEKI 183
>pdb|3AWF|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
pdb|3AWF|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
pdb|3AWF|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
Length = 346
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 110/181 (60%), Gaps = 7/181 (3%)
Query: 37 RNLVSKKRRRMLVEGYDLDMSYITDRLLAMSFPAEHMRAVYRNPLWQVKAVLDMRHQEHY 96
R +S+ +RR +G+DLD++Y+TD ++AMSFP+ ++++RNP+ +V +H + +
Sbjct: 15 RRTISQNKRRYRKDGFDLDLTYVTDHVIAMSFPSSGRQSLFRNPIGEVSRFFKTKHPDKF 74
Query: 97 KVYNLCIEETYDPEHFYSRVERYPFDDNHVPPLEMIKLLCESVHSWLSSDPKNIAVIHCM 156
++YNLC E YD F + V R DD++VP L + + W++SDP ++ IHC
Sbjct: 75 RIYNLCSERGYDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDAKVWMTSDPDHVIAIHCK 134
Query: 157 AGKGRTGLMVCSYLVYTGM--SAEEALQLYAHKRTTNN-----EGVSIPSQRRYVGYWNN 209
GKGRTG +V S+L+ G +A+EAL+ + +RT +GV SQ RYVGY+
Sbjct: 135 GGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRTDFEVGDVFQGVETASQIRYVGYFEK 194
Query: 210 I 210
I
Sbjct: 195 I 195
>pdb|3AWG|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
pdb|3AWG|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
pdb|3AWG|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
Mutant (248-576)
Length = 334
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 110/178 (61%), Gaps = 7/178 (3%)
Query: 40 VSKKRRRMLVEGYDLDMSYITDRLLAMSFPAEHMRAVYRNPLWQVKAVLDMRHQEHYKVY 99
+S+ +RR +G+DLD++Y+TD ++AMSFP+ ++++RNP+ +V +H + +++Y
Sbjct: 6 ISQNKRRYRKDGFDLDLTYVTDHVIAMSFPSSGRQSLFRNPIGEVSRFFKTKHPDKFRIY 65
Query: 100 NLCIEETYDPEHFYSRVERYPFDDNHVPPLEMIKLLCESVHSWLSSDPKNIAVIHCMAGK 159
NLC E YD F + V R DD++VP L + + W++SDP ++ IHC AGK
Sbjct: 66 NLCSERGYDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDAKVWMTSDPDHVIAIHCKAGK 125
Query: 160 GRTGLMVCSYLVYTGM--SAEEALQLYAHKRTTNN-----EGVSIPSQRRYVGYWNNI 210
GRTG +V S+L+ G +A+EAL+ + +RT +GV SQ RYVGY+ I
Sbjct: 126 GRTGTLVSSWLLEDGKFDTAKEALEYFGSRRTDFEVGDVFQGVETASQIRYVGYFEKI 183
>pdb|3AWE|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
pdb|3AWE|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
pdb|3AWE|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
Length = 334
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 109/178 (61%), Gaps = 7/178 (3%)
Query: 40 VSKKRRRMLVEGYDLDMSYITDRLLAMSFPAEHMRAVYRNPLWQVKAVLDMRHQEHYKVY 99
+S+ +RR +G+DLD++Y+TD ++AMSFP+ ++++RNP+ +V +H + +++Y
Sbjct: 6 ISQNKRRYRKDGFDLDLTYVTDHVIAMSFPSSGRQSLFRNPIGEVSRFFKTKHPDKFRIY 65
Query: 100 NLCIEETYDPEHFYSRVERYPFDDNHVPPLEMIKLLCESVHSWLSSDPKNIAVIHCMAGK 159
NLC E YD F + V R DD++VP L + + W++SDP ++ IHC GK
Sbjct: 66 NLCSERGYDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDAKVWMTSDPDHVIAIHCKGGK 125
Query: 160 GRTGLMVCSYLVYTGM--SAEEALQLYAHKRTTNN-----EGVSIPSQRRYVGYWNNI 210
GRTG +V S+L+ G +A+EAL+ + +RT +GV SQ RYVGY+ I
Sbjct: 126 GRTGTLVSSWLLEDGKFDTAKEALEYFGSRRTDFEVGDVFQGVETASQIRYVGYFEKI 183
>pdb|3V0D|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s)
pdb|3V0D|B Chain B, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s)
pdb|3V0F|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Form Ii
pdb|3V0F|B Chain B, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Form Ii
pdb|3V0G|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Form Iii
pdb|3V0G|B Chain B, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Form Iii
pdb|3V0G|C Chain C, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Form Iii
pdb|3V0G|D Chain D, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Form Iii
pdb|3V0H|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Complexed With D-Myo-
Inositol-1,4,5-Triphosphate
pdb|3V0H|B Chain B, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
241-576(C363s), Complexed With D-Myo-
Inositol-1,4,5-Triphosphate
Length = 339
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 109/181 (60%), Gaps = 7/181 (3%)
Query: 37 RNLVSKKRRRMLVEGYDLDMSYITDRLLAMSFPAEHMRAVYRNPLWQVKAVLDMRHQEHY 96
R +S+ +RR +G+DLD++Y+TD ++AMSFP+ ++++RNP+ +V +H + +
Sbjct: 8 RRTISQNKRRYRKDGFDLDLTYVTDHVIAMSFPSSGRQSLFRNPIGEVSRFFKTKHPDKF 67
Query: 97 KVYNLCIEETYDPEHFYSRVERYPFDDNHVPPLEMIKLLCESVHSWLSSDPKNIAVIHCM 156
++YNLC E YD F + V R DD++VP L + + W++SDP ++ IH
Sbjct: 68 RIYNLCSERGYDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDAKVWMTSDPDHVIAIHSK 127
Query: 157 AGKGRTGLMVCSYLVYTGM--SAEEALQLYAHKRTTNN-----EGVSIPSQRRYVGYWNN 209
GKGRTG +V S+L+ G +A+EAL+ + +RT +GV SQ RYVGY+
Sbjct: 128 GGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRTDFEVGDVFQGVETASQIRYVGYFEK 187
Query: 210 I 210
I
Sbjct: 188 I 188
>pdb|3V0I|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
256-576, E411f
Length = 324
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 104/171 (60%), Gaps = 7/171 (4%)
Query: 47 MLVEGYDLDMSYITDRLLAMSFPAEHMRAVYRNPLWQVKAVLDMRHQEHYKVYNLCIEET 106
M +G+DLD++Y+TD ++AMSFP+ ++++RNP+ +V +H + +++YNLC E
Sbjct: 3 MRKDGFDLDLTYVTDHVIAMSFPSSGRQSLFRNPIGEVSRFFKTKHPDKFRIYNLCSERG 62
Query: 107 YDPEHFYSRVERYPFDDNHVPPLEMIKLLCESVHSWLSSDPKNIAVIHCMAGKGRTGLMV 166
YD F + V R DD++VP L + + W++SDP ++ IHC GKGRTG +V
Sbjct: 63 YDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDAKVWMTSDPDHVIAIHCKGGKGRTGTLV 122
Query: 167 CSYLVYTGM--SAEEALQLYAHKRTTNN-----EGVSIPSQRRYVGYWNNI 210
S+L+ G +A+EAL+ + +RT +GV SQ RYVGY+ I
Sbjct: 123 SSWLLEDGKFDTAKEALEYFGSRRTDFEVGDVFQGVFTASQIRYVGYFEKI 173
>pdb|3V0E|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
Sensor-Containing Phosphatase (Ci-Vsp), Residues
256-576(C363s)
Length = 324
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 103/171 (60%), Gaps = 7/171 (4%)
Query: 47 MLVEGYDLDMSYITDRLLAMSFPAEHMRAVYRNPLWQVKAVLDMRHQEHYKVYNLCIEET 106
M +G+DLD++Y+TD ++AMSFP+ ++++RNP+ +V +H + +++YNLC E
Sbjct: 3 MRKDGFDLDLTYVTDHVIAMSFPSSGRQSLFRNPIGEVSRFFKTKHPDKFRIYNLCSERG 62
Query: 107 YDPEHFYSRVERYPFDDNHVPPLEMIKLLCESVHSWLSSDPKNIAVIHCMAGKGRTGLMV 166
YD F + V R DD++VP L + + W++SDP ++ IH GKGRTG +V
Sbjct: 63 YDETKFDNHVYRVMIDDHNVPTLVDLLKFIDDAKVWMTSDPDHVIAIHSKGGKGRTGTLV 122
Query: 167 CSYLVYTGM--SAEEALQLYAHKRTTNN-----EGVSIPSQRRYVGYWNNI 210
S+L+ G +A+EAL+ + +RT +GV SQ RYVGY+ I
Sbjct: 123 SSWLLEDGKFDTAKEALEYFGSRRTDFEVGDVFQGVETASQIRYVGYFEKI 173
>pdb|3N0A|A Chain A, Crystal Structure Of Auxilin (40-400)
Length = 361
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 96/163 (58%), Gaps = 8/163 (4%)
Query: 53 DLDMSYITDRLLAMSFPAEHMRAVYRNPLWQVKAVLDMRHQEHYKVYNLCIEETYDPEHF 112
DLD +Y+T R++ MSFP + + +RN + +++ LD RH +HY VYNL ++Y F
Sbjct: 21 DLDFTYVTSRIIVMSFPLDSVDIGFRNQVDDIRSFLDSRHLDHYTVYNLS-PKSYRTAKF 79
Query: 113 YSRVERYPFDDNHVPPLEMIKLLCESVHSWLSSDPKNIAVIHCMAGKGRTGLMVCSYLVY 172
+SRV + P L + +C ++++WL +PKN+ V+HC+ G+ + ++V + ++
Sbjct: 80 HSRVSECSWPIRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAASSILVGAMFIF 139
Query: 173 TGM--SAEEALQLYAHKRTTNNEGVSI-PSQRRYVGYWNNIIS 212
+ + A++L KR G+ + PS RRY+GY ++++
Sbjct: 140 CNLYSTPGPAVRLLYAKR----PGIGLSPSHRRYLGYMCDLLA 178
>pdb|1R6H|A Chain A, Solution Structure Of Human Prl-3
Length = 172
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 87 VLDMRHQEHYKVYNLCIEETYDP---EHFYSRVERYPFDDNHVPPLEMIKLLCESVHSWL 143
+ D++ V +C E TYD E V +PFDD PP ++++ V +
Sbjct: 37 IEDLKKYGATTVVRVC-EVTYDKTPLEKDGITVVDWPFDDGAPPPGKVVEDWLSLVKAKF 95
Query: 144 SSDPKNIAVIHCMAGKGRTGLMVCSYLVYTGMSAEEALQLYAHKR 188
P + +HC+AG GR ++V L+ +GM E+A+Q KR
Sbjct: 96 CEAPGSCVAVHCVAGLGRAPVLVALALIESGMKYEDAIQFIRQKR 140
>pdb|1V3A|A Chain A, Structure Of Human Prl-3, The Phosphatase Associated With
Cancer Metastasis
Length = 173
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Query: 89 DMRHQEHYKVYNLCIEETYDP---EHFYSRVERYPFDDNHVPPLEMIKLLCESVHSWLSS 145
D++ V +C E TYD E V +PFDD PP ++++ V +
Sbjct: 36 DLKKYGATTVVRVC-EVTYDKTPLEKDGITVVDWPFDDGAPPPGKVVEDWLSLVKAKFCE 94
Query: 146 DPKNIAVIHCMAGKGRTGLMVCSYLVYTGMSAEEALQLYAHKR 188
P + +HC+AG GR ++V L+ +GM E+A+Q KR
Sbjct: 95 APGSCVAVHCVAGLGRAPVLVALALIESGMKYEDAIQFIRQKR 137
>pdb|3RZ2|A Chain A, Crystal Of Prl-1 Complexed With Peptide
pdb|3RZ2|B Chain B, Crystal Of Prl-1 Complexed With Peptide
Length = 189
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 104 EETYDP---EHFYSRVERYPFDDNHVPPLEMIKLLCESVHSWLSSDPKNIAVIHCMAGKG 160
E TYD E V +PFDD P +++ V +P +HC+AG G
Sbjct: 70 EATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLG 129
Query: 161 RTGLMVCSYLVYTGMSAEEALQLYAHKR 188
R ++V L+ GM E+A+Q KR
Sbjct: 130 RAPVLVALALIEGGMKYEDAVQFIRQKR 157
>pdb|1X24|A Chain A, Prl-1 (Ptp4a)
pdb|1X24|B Chain B, Prl-1 (Ptp4a)
Length = 180
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 104 EETYDP---EHFYSRVERYPFDDNHVPPLEMIKLLCESVHSWLSSDPKNIAVIHCMAGKG 160
E TYD E V +PFDD P +++ V +P +HC+AG G
Sbjct: 70 EATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLG 129
Query: 161 RTGLMVCSYLVYTGMSAEEALQLYAHKR 188
R ++V L+ GM E+A+Q KR
Sbjct: 130 RAPVLVALALIEGGMKYEDAVQFIRQKR 157
>pdb|1YN9|A Chain A, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
pdb|1YN9|B Chain B, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
pdb|1YN9|C Chain C, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
Length = 169
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 22/122 (18%)
Query: 74 RAVYRNPLWQVKAVLDMRHQEHYKVYNLCIEETYDPEHF------YSRVERYPFDDNHVP 127
+ V +NP + A++D+ + Y YD HF Y +++ +P
Sbjct: 48 QIVKQNP--SIGAIIDLTNTSKY----------YDGVHFLRAGLLYKKIQ---VPGQTLP 92
Query: 128 PLEMIKLLCESVHSWLSSDPKNIAVIHCMAGKGRTGLMVCSYLVYT-GMSAEEALQLYAH 186
P +++ ++V + P + +HC G RTG MVC YL++T G++ +EA+ +
Sbjct: 93 PESIVQEFIDTVKEFTEKCPGMLVGVHCTHGINRTGYMVCRYLMHTLGIAPQEAIDRFEK 152
Query: 187 KR 188
R
Sbjct: 153 AR 154
>pdb|1RXD|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
4a1
pdb|1RXD|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
4a1
pdb|1RXD|C Chain C, Crystal Structure Of Human Protein Tyrosine Phosphatase
4a1
Length = 159
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Query: 104 EETYDP---EHFYSRVERYPFDDNHVPPLEMIKLLCESVHSWLSSDPKNIAVIHCMAGKG 160
E TYD E V +PFDD P +++ V +P +HC+AG G
Sbjct: 49 EATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLG 108
Query: 161 RTGLMVCSYLVYTGMSAEEALQLYAHKR 188
R ++V L+ G E+A+Q KR
Sbjct: 109 RAPVLVALALIEGGXKYEDAVQFIRQKR 136
>pdb|1ZCK|A Chain A, Native Structure Prl-1 (Ptp4a1)
pdb|1ZCK|B Chain B, Native Structure Prl-1 (Ptp4a1)
pdb|1ZCK|C Chain C, Native Structure Prl-1 (Ptp4a1)
Length = 154
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Query: 104 EETYDP---EHFYSRVERYPFDDNHVPPLEMIKLLCESVHSWLSSDPKNIAVIHCMAGKG 160
E TYD E V +PFDD P +++ V +P +HC+AG G
Sbjct: 44 EATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLG 103
Query: 161 RTGLMVCSYLVYTGMSAEEALQLYAHKR 188
R ++V L+ G E+A+Q KR
Sbjct: 104 RAPVLVALALIEGGXKYEDAVQFIRQKR 131
>pdb|1ZCL|A Chain A, Prl-1 C104s Mutant In Complex With Sulfate
pdb|1ZCL|B Chain B, Prl-1 C104s Mutant In Complex With Sulfate
Length = 180
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Query: 104 EETYDP---EHFYSRVERYPFDDNHVPPLEMIKLLCESVHSWLSSDPKNIAVIHCMAGKG 160
E TYD E V +PFDD P +++ V +P +H +AG G
Sbjct: 70 EATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHSVAGLG 129
Query: 161 RTGLMVCSYLVYTGMSAEEALQLYAHKR 188
R ++V L+ GM E+A+Q KR
Sbjct: 130 RAPVLVALALIEGGMKYEDAVQFIRQKR 157
>pdb|1XM2|A Chain A, Crystal Structure Of Human Prl-1
pdb|1XM2|B Chain B, Crystal Structure Of Human Prl-1
pdb|1XM2|C Chain C, Crystal Structure Of Human Prl-1
pdb|1XM2|D Chain D, Crystal Structure Of Human Prl-1
pdb|1XM2|E Chain E, Crystal Structure Of Human Prl-1
pdb|1XM2|F Chain F, Crystal Structure Of Human Prl-1
Length = 173
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 104 EETYDP---EHFYSRVERYPFDDNHVPPLEMIKLLCESVHSWLSSDPKNIAVIHCMAGKG 160
E TYD E V +PFDD P +++ V +P +H +AG G
Sbjct: 50 EATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHSVAGLG 109
Query: 161 RTGLMVCSYLVYTGMSAEEALQLYAHKR 188
R ++V L+ G E+A+Q KR
Sbjct: 110 RAPVLVALALIEGGXKYEDAVQFIRQKR 137
>pdb|2I6I|A Chain A, Crystal Structures Of The Archaeal Sulfolobus Ptp-Fold
Phosphatase
pdb|2I6J|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphate Ion
pdb|2I6M|A Chain A, Crystal Structure Of The Complexes Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Tungstate
pdb|3RO1|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Terpyridine
Platinum(Ii)
Length = 161
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 14/88 (15%)
Query: 103 IEETYDPEHFYSRVER--------YPFDDNHVPPLEMIKLLCESVHSWLSSDPKNIAVIH 154
IEE++ + +Y + + P D VP ++ WL S+ K ++H
Sbjct: 41 IEESWGDKDYYLSILKKNGLQPLHIPIPDGGVPSDSQFL----TIMKWLLSE-KEGNLVH 95
Query: 155 CMAGKGRTGLMVCSYLVYT-GMSAEEAL 181
C+ G GRTG ++ SYL+ T G+ E A+
Sbjct: 96 CVGGIGRTGTILASYLILTEGLEVESAI 123
>pdb|3S4O|A Chain A, Protein Tyrosine Phosphatase (Putative) From Leishmania
Major
pdb|3S4O|B Chain B, Protein Tyrosine Phosphatase (Putative) From Leishmania
Major
Length = 167
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 27/120 (22%)
Query: 87 VLDMRHQEHYKVYNLCIEETYDPEHFYSR---VERYPFDDNHVPPLEMIKLLCESVHSWL 143
+ +++H+ + +C TYD SR V +PFDD PP + + SWL
Sbjct: 40 IKELQHRGVRHLVRVC-GPTYDATLVKSRGIDVHSWPFDDG-APPTRAV------LDSWL 91
Query: 144 --------------SSDPKNIAVIHCMAGKGRTGLMVCSYLV-YTGMSAEEALQLYAHKR 188
S P I V HC+AG GR ++V LV Y +SA +A+ L KR
Sbjct: 92 KLLDTELARQQEDPSVPPPTIGV-HCVAGLGRAPILVALALVEYGNVSALDAIALIREKR 150
>pdb|4AZ1|A Chain A, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
pdb|4AZ1|B Chain B, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
Length = 302
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 101 LCIEETYDPEHFYSRVERYPFDDNHVPPLEMIKLLCESVHSWLSSDPKNI-AVIHCMAGK 159
L ++ +P H +++V+ + D+ +P E++ + + + P + V+HC AG
Sbjct: 174 LILQRADEPPHKFTQVQYTGWPDHGIP---QSATSLEALLTNVKNSPTTVPVVVHCSAGI 230
Query: 160 GRTGLMVCSYLVYT 173
GRTG ++ +Y T
Sbjct: 231 GRTGTLIGAYAALT 244
>pdb|2DXP|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphopeptides
A-(P)y-R
pdb|2I6O|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Phosphopeptides
N-g-(p)y-k-n
pdb|2I6P|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Pnpp
Length = 161
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 14/88 (15%)
Query: 103 IEETYDPEHFYSRVER--------YPFDDNHVPPLEMIKLLCESVHSWLSSDPKNIAVIH 154
IEE++ + +Y + + P D VP ++ WL S+ K ++H
Sbjct: 41 IEESWGDKDYYLSILKKNGLQPLHIPIPDGGVPSDSQFL----TIMKWLLSE-KEGNLVH 95
Query: 155 CMAGKGRTGLMVCSYLVYT-GMSAEEAL 181
+ G GRTG ++ SYL+ T G+ E A+
Sbjct: 96 SVGGIGRTGTILASYLILTEGLEVESAI 123
>pdb|1JLN|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase Ptp-SlBR7
Length = 297
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 10/118 (8%)
Query: 94 EHYKVYNLCIEETYDPEH----FYSRVERYPFDDNHVPPLEMIKLLCESVHSWLSSDPKN 149
++Y + NL +++ +H +Y+ + D+ P +++L+ + L+S+ +
Sbjct: 167 DNYTIRNLVLKQGSHTQHVKHYWYTSWPDHKTPDSAQP---LLQLMLDVEEDRLASEGRG 223
Query: 150 IAVIHCMAGKGRTGLMVCSYLVYTGMSAE---EALQLYAHKRTTNNEGVSIPSQRRYV 204
V+HC AG GRTG + + + + E +AL + R V Q +V
Sbjct: 224 PVVVHCSAGIGRTGCFIATSIGCQQLKEEGVVDALSIVCQLRVDRGGMVQTSEQYEFV 281
>pdb|2A8B|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Phosphatase Receptor, Type R
Length = 283
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 55/125 (44%), Gaps = 10/125 (8%)
Query: 87 VLDMRHQEHYKVYNLCIEETYDPEH----FYSRVERYPFDDNHVPPLEMIKLLCESVHSW 142
V+ + ++Y + NL +++ +H +Y+ + D+ P +++L+ +
Sbjct: 147 VISVNECDNYTIRNLVLKQGSHTQHVKHYWYTSWPDHKTPDSAQP---LLQLMLDVEEDR 203
Query: 143 LSSDPKNIAVIHCMAGKGRTGLMVCSYLVYTGMSAE---EALQLYAHKRTTNNEGVSIPS 199
L+S + V+HC AG GRTG + + + + E +AL + R V
Sbjct: 204 LASQGRGPVVVHCSAGIGRTGCFIATSIGCQQLKEEGVVDALSIVCQLRMDRGGMVQTSE 263
Query: 200 QRRYV 204
Q +V
Sbjct: 264 QYEFV 268
>pdb|2C46|A Chain A, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|B Chain B, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|C Chain C, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
pdb|2C46|D Chain D, Crystal Structure Of The Human Rna Guanylyltransferase And
5'-Phosphatase
Length = 241
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Query: 135 LCESVHSWLSSDPKNIAVIHCMAGKGRTGLMVCSYLVYT-GMSAEEALQLYAHKR 188
LCE + +P + +HC G RTG ++C++LV S E A+ +A R
Sbjct: 131 LCERFNE---RNPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQAR 182
>pdb|1I9S|A Chain A, Crystal Structure Of The Rna Triphosphatase Domain Of
Mouse Mrna Capping Enzyme
Length = 210
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 135 LCESVHSWLSSDPKNIAVIHCMAGKGRTGLMVCSYLVYT-GMSAEEALQLYAHKR 188
LCE + P + +HC G RTG ++C++LV S E A+ +A R
Sbjct: 109 LCERFNE---RSPPELIGVHCTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQAR 160
>pdb|1YFO|A Chain A, Receptor Protein Tyrosine Phosphatase Alpha, Domain 1 From
Mouse
pdb|1YFO|B Chain B, Receptor Protein Tyrosine Phosphatase Alpha, Domain 1 From
Mouse
Length = 302
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 13/99 (13%)
Query: 96 YKVYNLCIEETYD-----PEHFYSRVERYPFDDNHVP--PLEMIKLLCESVHSWLSSDPK 148
Y V CI++ D P+ ++ + D VP P+ M+K L + +P+
Sbjct: 168 YTVRKFCIQQVGDVTNRKPQRLITQFHFTSWPDFGVPFTPIGMLKFL----KKVKACNPQ 223
Query: 149 --NIAVIHCMAGKGRTGLMVCSYLVYTGMSAEEALQLYA 185
V+HC AG GRTG V + M +E + +Y
Sbjct: 224 YAGAIVVHCSAGVGRTGTFVVIDAMLDMMHSERKVDVYG 262
>pdb|2H03|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2HC1|A Chain A, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta.
pdb|2HC2|A Chain A, Engineered Protein Tyrosine Phosphatase Beta Catalytic
Domain
Length = 291
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Query: 99 YNLCIEETYDPEHFYSRVERYPFDDNHVPPL-EMIKLLCESVHSWLSSDP-KNIAVIHCM 156
+ +C EE D + D+ VP + + +V +++ P V+HC
Sbjct: 167 FKICGEEQLDAHRLIRHFHYTVWPDHGVPETTQSLIQFVRTVRDYINRSPGAGPTVVHCS 226
Query: 157 AGKGRTGLMVCSYLVYTGMSAEEALQLYA 185
AG GRTG + + + +++++ +Y
Sbjct: 227 AGVGRTGTFIALDRILQQLDSKDSVDIYG 255
>pdb|2H02|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2H02|B Chain B, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2H04|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I3R|A Chain A, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta
pdb|2I3R|B Chain B, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta
pdb|2I3U|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4E|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4E|B Chain B, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4G|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With A Sulfamic Acid
(Soaking Experiment)
pdb|2I4H|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain Co-Crystallized With A Sulfamic Acid
Inhibitor
pdb|2I5X|A Chain A, Engineering The Ptpbeta Catalytic Domain With Improved
Crystallization Properties
pdb|2I5X|B Chain B, Engineering The Ptpbeta Catalytic Domain With Improved
Crystallization Properties
Length = 313
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Query: 99 YNLCIEETYDPEHFYSRVERYPFDDNHVPPL-EMIKLLCESVHSWLSSDP-KNIAVIHCM 156
+ +C EE D + D+ VP + + +V +++ P V+HC
Sbjct: 186 FKICGEEQLDAHRLIRHFHYTVWPDHGVPETTQSLIQFVRTVRDYINRSPGAGPTVVHCS 245
Query: 157 AGKGRTGLMVCSYLVYTGMSAEEALQLYA 185
AG GRTG + + + +++++ +Y
Sbjct: 246 AGVGRTGTFIALDRILQQLDSKDSVDIYG 274
>pdb|2AHS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Receptor Phosphatase Beta
pdb|2AHS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Receptor Phosphatase Beta
Length = 295
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Query: 99 YNLCIEETYDPEHFYSRVERYPFDDNHVPPL-EMIKLLCESVHSWLSSDP-KNIAVIHCM 156
+ +C EE D + D+ VP + + +V +++ P V+HC
Sbjct: 170 FKICGEEQLDAHRLIRHFHYTVWPDHGVPETTQSLIQFVRTVRDYINRSPGAGPTVVHCS 229
Query: 157 AGKGRTGLMVCSYLVYTGMSAEEALQLYA 185
AG GRTG + + + +++++ +Y
Sbjct: 230 AGVGRTGTFIALDRILQQLDSKDSVDIYG 258
>pdb|3RGO|A Chain A, Crystal Structure Of Ptpmt1
Length = 157
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 153 IHCMAGKGRTGLMVCSYLVYT-GMSAEEALQLYAHKRT 189
+HC AG+ R+ MV +YL+ S EEA++ A R+
Sbjct: 94 VHCKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIRS 131
>pdb|1G4U|S Chain S, Crystal Structure Of The Salmonella Tyrosine Phosphatase
And Gtpase Activating Protein Sptp Bound To Rac1
pdb|1G4W|R Chain R, Crystal Structure Of The Salmonella Tyrosine Phosphatase
And Gtpase Activating Protein Sptp
Length = 383
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 94 EHYKVYNLCIEETYDPEHFYSRVERYPFDDNHVPPLEMIKLLCESVHS-------WLSSD 146
+ Y + C E+ Y + V+ +P D +P + ++ L + V + SS
Sbjct: 256 DQYNMQLSCGEKRYTIPVLH--VKNWP-DHQPLPSTDQLEYLADRVKNSNQNGAPGRSSS 312
Query: 147 PKNIAVIHCMAGKGRTGLMVCSYLV 171
K++ +IHC+ G GRTG M + ++
Sbjct: 313 DKHLPMIHCLGGVGRTGTMAAALVL 337
>pdb|2GP0|A Chain A, Heptp Catalytic Domain (Residues 44-339), S225d Mutant
Length = 309
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 87 VLDMRHQEHYKVYNLCI---EETYDPEH-FYSRVERYPFDDNHVPPLEMIKLLCESVHSW 142
+ DM+ Y V L I EE D +H +S + ++ P L ++ + ES +
Sbjct: 171 IQDMKECPEYTVRQLTIQYQEERRDVKHILFSAWPDHQTPESAGPLLRLVAEVEESPET- 229
Query: 143 LSSDPKNIAVIHCMAGKGRTGLMVCSYL 170
++ P I V+HC AG GRTG + + +
Sbjct: 230 -AAHPGPI-VVHCSAGIGRTGCFIATRI 255
>pdb|1OHC|A Chain A, Structure Of The Proline Directed Phosphatase Cdc14
pdb|1OHD|A Chain A, Structure Of Cdc14 In Complex With Tungstate
Length = 348
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 121 FDDNHVPPLEMIKLLCESVHSWLSSDPKNIAVIHCMAGKGRTGLMVCSYLV-YTGMSAEE 179
F D P ++K + + + + +HC AG GRTG ++ Y++ + M+A E
Sbjct: 247 FADGSTPTDAIVKEFLD-----ICENAEGAIAVHCKAGLGRTGTLIACYIMKHYRMTAAE 301
Query: 180 AL 181
+
Sbjct: 302 TI 303
>pdb|4ERC|A Chain A, Structure Of Vhz Bound To Metavanadate
pdb|4ERC|B Chain B, Structure Of Vhz Bound To Metavanadate
Length = 150
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 14/85 (16%)
Query: 111 HFYSRVERYPFDDNHVPPLEMIKL----LCESVHSWL--------SSDPKNIAV-IHCMA 157
H S ER P + P L + +L C + ++ + AV +HC
Sbjct: 38 HLVSLTERGPPHSDSCPGLTLHRLRIPDFCPPAPDQIDRFVQIVDEANARGEAVGVHCAL 97
Query: 158 GKGRTGLMVCSYLVYT-GMSAEEAL 181
G GRTG M+ YLV G++A +A+
Sbjct: 98 GFGRTGTMLACYLVKERGLAAGDAI 122
>pdb|1LAR|A Chain A, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Lar
pdb|1LAR|B Chain B, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Lar
Length = 575
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 152 VIHCMAGKGRTGLMVCSYLVYTGMSAEEALQLYAH 186
V+HC AG GRTG + + M E+ + +Y H
Sbjct: 213 VVHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGH 247
Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 152 VIHCMAGKGRTGLMVCSYLVYTGMSAEEALQLYAHKRT 189
+HC AG GRTG+ + +V M E + ++ +T
Sbjct: 504 TVHCSAGVGRTGVFITLSIVLERMRYEGVVDMFQTVKT 541
>pdb|2OUD|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mkp5
Length = 177
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 152 VIHCMAGKGRTGLMVCSYLV-YTGMSAEEALQLYAHKRTTNNEGVSIPSQRRYVGYWNNI 210
+IHC AG R+ +V +YL+ +T M+ +A + KR P + + +
Sbjct: 91 LIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKR---------PIISPNLNFMGQL 141
Query: 211 ISFPRGVHSG-TPDVNLPKRCSRE 233
+ F +++G TP + PK E
Sbjct: 142 LEFEEDLNNGVTPRILTPKLMGVE 165
>pdb|2Y96|A Chain A, Structure Of Human Dual-Specificity Phosphatase 27
pdb|2Y96|B Chain B, Structure Of Human Dual-Specificity Phosphatase 27
Length = 219
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 145 SDPKNIAVIHCMAGKGRTGLMVCSYL-VYTGMSAEEALQLYAHKR 188
SD + ++HC+ G+ R+ +V +YL ++ M+ +A+Q A R
Sbjct: 136 SDDHSKILVHCVMGRSRSATLVLAYLMIHKDMTLVDAIQQVAKNR 180
>pdb|3SR9|A Chain A, Crystal Structure Of Mouse Ptpsigma
Length = 583
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 152 VIHCMAGKGRTGLMVCSYLVYTGMSAEEALQLYAH 186
V+HC AG GRTG + + + E+ + +Y H
Sbjct: 227 VVHCSAGVGRTGCFIVIDAMLERIKTEKTVDVYGH 261
>pdb|1I9T|A Chain A, Crystal Structure Of The Oxidized Rna Triphosphatase
Domain Of Mouse Mrna Capping Enzyme
Length = 210
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query: 135 LCESVHSWLSSDPKNIAVIHCMAGKGRTGLMVCSYLVYT-GMSAEEALQLYAHKR 188
LCE + P + +H G RTG ++C++LV S E A+ +A R
Sbjct: 109 LCERFNE---RSPPELIGVHXTHGFNRTGFLICAFLVEKMDWSIEAAVATFAQAR 160
>pdb|2BZL|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase N14 At 1.65 A Resolution
Length = 325
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 152 VIHCMAGKGRTGLMVCSYLVYTGMSAEEALQL 183
V+HC AG GRTG+++ S L+ + E +++
Sbjct: 256 VVHCSAGVGRTGVLILSELMIYCLEHNEKVEV 287
>pdb|2FH7|A Chain A, Crystal Structure Of The Phosphatase Domains Of Human Ptp
Sigma
Length = 595
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 152 VIHCMAGKGRTGLMVCSYLVYTGMSAEEALQLYAH 186
V+HC AG GRTG + + + E+ + +Y H
Sbjct: 225 VVHCSAGVGRTGCFIVIDAMLERIKPEKTVDVYGH 259
>pdb|2JJD|A Chain A, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|B Chain B, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|C Chain C, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|D Chain D, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|E Chain E, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|F Chain F, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
Length = 599
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 152 VIHCMAGKGRTGLMVCSYLVYTGMSAEEALQLY 184
V+HC AG GRTG + + M AE+ + ++
Sbjct: 227 VVHCSAGVGRTGTFIVIDAMMAMMHAEQKVDVF 259
>pdb|2NV5|A Chain A, Crystal Structure Of A C-Terminal Phosphatase Domain Of
Rattus Norvegicus Ortholog Of Human Protein Tyrosine
Phosphatase, Receptor Type, D (Ptprd)
pdb|2NV5|B Chain B, Crystal Structure Of A C-Terminal Phosphatase Domain Of
Rattus Norvegicus Ortholog Of Human Protein Tyrosine
Phosphatase, Receptor Type, D (Ptprd)
pdb|2NV5|C Chain C, Crystal Structure Of A C-Terminal Phosphatase Domain Of
Rattus Norvegicus Ortholog Of Human Protein Tyrosine
Phosphatase, Receptor Type, D (Ptprd)
Length = 299
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 152 VIHCMAGKGRTGLMVCSYLVYTGMSAEEALQLYAH 186
V+HC AG GRTG + + + E+ + +Y H
Sbjct: 222 VVHCSAGVGRTGCFIVIDAMLERIKHEKTVDIYGH 256
>pdb|2WGP|A Chain A, Crystal Structure Of Human Dual Specificity Phosphatase 14
pdb|2WGP|B Chain B, Crystal Structure Of Human Dual Specificity Phosphatase 14
Length = 190
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 12/95 (12%)
Query: 122 DDNHVPPLEMIKLLCESVHSWLSSDPKNIAVIHCMAGKGRTGLMVCSYLV-YTGMSAEEA 180
D H P + + +HS S ++HC AG R+ + +YL+ + + EA
Sbjct: 79 DMPHAPIGLYFDTVADKIHS--VSRKHGATLVHCAAGVSRSATLCIAYLMKFHNVCLLEA 136
Query: 181 LQLYAHKRTTNNEGVSIPSQRRYVGYWNNIISFPR 215
+R P R VG+W +I + R
Sbjct: 137 YNWVKARR---------PVIRPNVGFWRQLIDYER 162
>pdb|2QDC|A Chain A, Crystal Structure Of The Heptp Catalytic Domain D236a
Mutant
Length = 309
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 87 VLDMRHQEHYKVYNLCI---EETYDPEH-FYSRVERYPFDDNHVPPLEMIKLLCESVHSW 142
+ DM+ Y V L I EE +H +S + ++ P L ++ + ES +
Sbjct: 171 IQDMKECPEYTVRQLTIQYQEERRSVKHILFSAWPAHQTPESAGPLLRLVAEVEESPET- 229
Query: 143 LSSDPKNIAVIHCMAGKGRTGLMVCSYL 170
++ P I V+HC AG GRTG + + +
Sbjct: 230 -AAHPGPI-VVHCSAGIGRTGCFIATRI 255
>pdb|3UJZ|A Chain A, Crystal Structure Of Enterohemorrhagic E. Coli Stce
Length = 869
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 49/121 (40%), Gaps = 7/121 (5%)
Query: 81 LWQVKAVLDMRHQEHYKVYNLCIEETYDPEHFYSRVERYPFDDNHVPPLEMIKLLCE--- 137
++ KAV D R + +N +E EH R E+ N + + +L E
Sbjct: 515 FFENKAVFDSRSSTGFSKWNADTQEXEPYEHTIDRAEQITASVNELSESKXAELXAEYAV 574
Query: 138 -SVHSWLSSDPKNIAVIHCMAGKGRTGLMV---CSYLVYTGMSAEEALQLYAHKRTTNNE 193
VH W + +NI + A + L + Y Y ++ +E + +K++ ++
Sbjct: 575 VKVHXWNGNWTRNIYIPTASADNRGSILTINHEAGYNSYLFINGDEKVVSQGYKKSFVSD 634
Query: 194 G 194
G
Sbjct: 635 G 635
>pdb|2A3K|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase, Ptpn7 (Heptp, Hematopoietic Protein
Tyrosine Phosphatase)
Length = 296
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 87 VLDMRHQEHYKVYNLCI---EETYDPEH-FYSRVERYPFDDNHVPPLEMIKLLCESVHSW 142
+ DM+ Y V L I EE +H +S + ++ P L ++ + ES +
Sbjct: 160 IQDMKECPEYTVRQLTIQYQEERRSVKHILFSAWPDHQTPESAGPLLRLVAEVEESPET- 218
Query: 143 LSSDPKNIAVIHCMAGKGRTGLMVCSYL 170
++ P I V+HC AG GRTG + + +
Sbjct: 219 -AAHPGPI-VVHCSAGIGRTGCFIATRI 244
>pdb|1ZC0|A Chain A, Crystal Structure Of Human Hematopoietic Tyrosine
Phosphatase (heptp) Catalytic Domain
Length = 309
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 87 VLDMRHQEHYKVYNLCI---EETYDPEH-FYSRVERYPFDDNHVPPLEMIKLLCESVHSW 142
+ DM+ Y V L I EE +H +S + ++ P L ++ + ES +
Sbjct: 171 IQDMKECPEYTVRQLTIQYQEERRSVKHILFSAWPDHQTPESAGPLLRLVAEVEESPET- 229
Query: 143 LSSDPKNIAVIHCMAGKGRTGLMVCSYL 170
++ P I V+HC AG GRTG + + +
Sbjct: 230 -AAHPGPI-VVHCSAGIGRTGCFIATRI 255
>pdb|3O4S|A Chain A, Crystal Structure Of Heptp With A Closed Wpd Loop And An
Ordered E- Loop
pdb|3O4T|A Chain A, Crystal Structure Of Heptp With An Open Wpd Loop And
Partially Depleted Active Site
pdb|3O4U|A Chain A, Crystal Structure Of Heptp With An Atypically Open Wpd
Loop
Length = 308
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 87 VLDMRHQEHYKVYNLCI---EETYDPEH-FYSRVERYPFDDNHVPPLEMIKLLCESVHSW 142
+ DM+ Y V L I EE +H +S + ++ P L ++ + ES +
Sbjct: 170 IQDMKECPEYTVRQLTIQYQEERRSVKHILFSAWPDHQTPESAGPLLRLVAEVEESPET- 228
Query: 143 LSSDPKNIAVIHCMAGKGRTGLMVCSYL 170
++ P I V+HC AG GRTG + + +
Sbjct: 229 -AAHPGPI-VVHCSAGIGRTGCFIATRI 254
>pdb|3QKP|A Chain A, Protein Tyrosine Phosphatase 1b - Apo W179f Mutant With
Open Wpd-Loop
pdb|3QKQ|A Chain A, Protein Tyrosine Phosphatase 1b - W179f Mutant Bound With
Vanadate
Length = 321
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 97 KVYNLCIEETYDPEHFYSRVERYPFDDNHVP--PLEMIKLLCESVHSWLSSDPKNIAVIH 154
++ NL +ET + HF+ F D VP P + L + S S V+H
Sbjct: 159 ELENLTTQETREILHFHYTT----FPDFGVPESPASFLNFLFKVRESGSLSPEHGPVVVH 214
Query: 155 CMAGKGRTG 163
C AG GR+G
Sbjct: 215 CSAGIGRSG 223
>pdb|2E0T|A Chain A, Crystal Structure Of Catalytic Domain Of Dual Specificity
Phosphatase 26, Ms0830 From Homo Sapiens
Length = 151
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 16/117 (13%)
Query: 109 PEHFYSRVERYPFDDNH-VPPLEM---IKLLCESVHSWLSSDPKNIAVIHCMAGKGRTGL 164
PE + RY + H P +M + + +H LS P ++HC G R+
Sbjct: 43 PEAYEGLGIRYLGVEAHDSPAFDMSIHFQTAADFIHRALSQ-PGGKILVHCAVGVSRSAT 101
Query: 165 MVCSYL-VYTGMSAEEALQLYAHKRTTNNEGVSIPSQRRYVGYWNNIISFPRGVHSG 220
+V +YL +Y ++ EA+ K+ ++ G+ IP++ G+ +++ R + G
Sbjct: 102 LVLAYLMLYHHLTLVEAI-----KKVKDHRGI-IPNR----GFLRQLLALDRRLRQG 148
>pdb|3RGQ|A Chain A, Crystal Structure Of Ptpmt1 In Complex With Pi(5)p
Length = 156
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 153 IHCMAGKGRTGLMVCSYLVYT-GMSAEEALQLYAHKRT 189
+H AG+ R+ MV +YL+ S EEA++ A R+
Sbjct: 95 VHSKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIRS 132
>pdb|2CFV|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Receptor Type J
Length = 316
Score = 28.5 bits (62), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 145 SDPKNIAVIHCMAGKGRTGLMVCSYLVYTGMSAEEALQLYA 185
S P++ ++HC AG GRTG + + + E + +Y
Sbjct: 234 SPPESPILVHCSAGVGRTGTFIAIDRLIYQIENENTVDVYG 274
>pdb|2I75|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase N4
(Ptpn4)
Length = 320
Score = 28.5 bits (62), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 151 AVIHCMAGKGRTGLMVCSYLVYTGMSAEEALQLYAHKRTTNNEG---VSIPSQRRYV 204
V+HC AG GRTG+++ + + + RT ++ + PSQ R+V
Sbjct: 240 VVVHCSAGIGRTGVLITMETAMCLIECNQPVYPLDIVRTMRDQRAMMIQTPSQYRFV 296
>pdb|2NLK|A Chain A, Crystal Structure Of D1 And D2 Catalytic Domains Of Human
Protein Tyrosine Phosphatase Gamma (D1+d2 Ptprg)
Length = 627
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 11/55 (20%)
Query: 152 VIHCMAGKGRTGLMVCSYLVYTGMSAEEALQLYAHKRTTNNEGV--SIPSQRRYV 204
++HC AG GRTG +Y+V M LQ K T N G I +QR Y+
Sbjct: 232 LVHCSAGVGRTG----TYIVIDSM-----LQQIKDKSTVNVLGFLKHIRTQRNYL 277
>pdb|1ZZW|A Chain A, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
pdb|1ZZW|B Chain B, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
Length = 149
Score = 28.5 bits (62), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 152 VIHCMAGKGRTGLMVCSYLV-YTGMSAEEALQLYAHKR 188
+IHC AG R+ +V +YL+ +T M+ +A + KR
Sbjct: 87 LIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKR 124
>pdb|3P0C|A Chain A, Nischarin Px-Domain
pdb|3P0C|B Chain B, Nischarin Px-Domain
Length = 130
Score = 28.5 bits (62), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 8 HEIAKTKRSSSFHDLHFEVI--NILTKSFYIRNLVSKKRRRMLVEGYDLDMSYITDRLLA 65
HE R S FHDLH +++ + K+ + K R LVE + D+ +LLA
Sbjct: 48 HEWTVKHRYSDFHDLHEKLVAERKIDKNLLPPKKIIGKNSRSLVEKREKDLEVYLQKLLA 107
Query: 66 MSFPA 70
+FP
Sbjct: 108 -AFPG 111
>pdb|2G59|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase From Homo Sapiens
pdb|2G59|B Chain B, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase From Homo Sapiens
Length = 297
Score = 28.1 bits (61), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 123 DNHVPPLEMIKLLCESVH--SWLSSDPKNIAVIHCMAGKGRTGLMVC 167
D+ VP + + + VH ++ K +IHC AG GRTG +
Sbjct: 191 DHGVPTANAAESILQFVHMVRQQATKSKGPMIIHCSAGVGRTGTFIA 237
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.137 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,131,984
Number of Sequences: 62578
Number of extensions: 473052
Number of successful extensions: 1209
Number of sequences better than 100.0: 92
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 1153
Number of HSP's gapped (non-prelim): 99
length of query: 426
length of database: 14,973,337
effective HSP length: 102
effective length of query: 324
effective length of database: 8,590,381
effective search space: 2783283444
effective search space used: 2783283444
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 53 (25.0 bits)