BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014327
(426 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q04088|POF21_ARATH Probable transcription factor PosF21 OS=Arabidopsis thaliana
GN=POSF21 PE=2 SV=1
Length = 398
Score = 459 bits (1180), Expect = e-128, Method: Compositional matrix adjust.
Identities = 250/373 (67%), Positives = 278/373 (74%), Gaps = 40/373 (10%)
Query: 1 MDKDKSLS--HGGIPPPS--GRYSSFSPPGNNNFNVKPELPSSSSFPPLAPGGSSSDGSH 56
MDK+KS + GG+PPPS GR S+FS G P+
Sbjct: 1 MDKEKSPAPPCGGLPPPSPSGRCSAFSEAG-----------------PI----------- 32
Query: 57 FGHQSDSNRFSHDLSRMHDNPPKNVGHRRAHSEILTLPDDISFDSDLGVVG-GADGPSLS 115
GH SD+NR SHD+SRM DNPPK +GHRRAHSEILTLPDD+SFDSDLGVVG ADG S S
Sbjct: 33 -GHGSDANRMSHDISRMLDNPPKKIGHRRAHSEILTLPDDLSFDSDLGVVGNAADGASFS 91
Query: 116 DETEEDLLSMYLDMDKFNASTATSGFQVGEPSAAAAPAPTSAAAAGSGISSVENVGVGST 175
DETEEDLLSMYLDMDKFN S+ATS QVGEPS A T S+ +N
Sbjct: 92 DETEEDLLSMYLDMDKFN-SSATSSAQVGEPSGTAWKNETMMQTGTGSTSNPQNTVNSLG 150
Query: 176 ERPRIRHQHSQSMDGSTSIKPEMLMSASDEAPSADSKKAMSAAKLAELALIDPKRAKRIW 235
ERPRIRHQHSQSMDGS +I EMLMS +++ + D+KK+MSA KLAELALIDPKRAKRIW
Sbjct: 151 ERPRIRHQHSQSMDGSMNIN-EMLMSGNEDDSAIDAKKSMSATKLAELALIDPKRAKRIW 209
Query: 236 ANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLTAENSELKLRLQ 295
ANRQSAARSKERK RYI ELERKVQTLQTEAT+LSAQLTLLQRDTNGLT EN+ELKLRLQ
Sbjct: 210 ANRQSAARSKERKTRYIFELERKVQTLQTEATTLSAQLTLLQRDTNGLTVENNELKLRLQ 269
Query: 296 TMEQQVHLQDALNDALKEEIQHLKVLTGQAMPNGGPMMNYPSFGAG-QQFYPNNQAMHTL 354
TMEQQVHLQD LN+ALKEEIQHLKVLTGQ P+ +NY SFG+ QQFY NNQ+M T+
Sbjct: 270 TMEQQVHLQDELNEALKEEIQHLKVLTGQVAPSA---LNYGSFGSNQQQFYSNNQSMQTI 326
Query: 355 LTAQQFQQLQIHS 367
L A+QFQQLQIHS
Sbjct: 327 LAAKQFQQLQIHS 339
>sp|Q69IL4|RF2A_ORYSJ Transcription factor RF2a OS=Oryza sativa subsp. japonica GN=RF2a
PE=1 SV=1
Length = 380
Score = 304 bits (779), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 178/294 (60%), Positives = 210/294 (71%), Gaps = 23/294 (7%)
Query: 68 HDLSRMHDNPPKNVGHRRAHSEILTLPDDISFDSDLGVVGGADGPSLSDETEEDLLSMYL 127
+D+SRM D P +N GHRRAHSEIL+LP+D+ DL GG DGPSLSDE +E+L SM+L
Sbjct: 35 YDISRMPDFPTRNPGHRRAHSEILSLPEDL----DLCAAGGGDGPSLSDENDEELFSMFL 90
Query: 128 DMDKFNASTATSGFQVGEPSAAAAPAPTSAAAAGSGISSVENVGVGSTERPRIRHQHSQS 187
D++K N++ S + S++A + + RP+ HQHS S
Sbjct: 91 DVEKLNSTCGAS----------SEAEAESSSAGAAAAVAAAAAAAAHGARPK--HQHSLS 138
Query: 188 MDGSTSIKPEMLMSAS---DEAPSADSKKAMSAAKLAELALIDPKRAKRIWANRQSAARS 244
MD S SIK E L+ AS + SA++KKA+SAAKLAELAL+DPKRAKRIWANRQSAARS
Sbjct: 139 MDESMSIKAEELVGASPGTEGMSSAEAKKAVSAAKLAELALVDPKRAKRIWANRQSAARS 198
Query: 245 KERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLTAENSELKLRLQTMEQQVHLQ 304
KERKMRYIAELERKVQTLQTEAT+LSAQL LLQRDT+GLT ENSELKLRLQTMEQQVHLQ
Sbjct: 199 KERKMRYIAELERKVQTLQTEATTLSAQLALLQRDTSGLTTENSELKLRLQTMEQQVHLQ 258
Query: 305 DALNDALKEEIQHLKVLTGQAMPNGGPMMNYPS----FGAGQQFYPNNQAMHTL 354
DALND LK E+Q LKV TGQ GG MMN+ FG QQ + NNQAM ++
Sbjct: 259 DALNDTLKSEVQRLKVATGQMANGGGMMMNFGGMPHQFGGNQQMFQNNQAMQSM 312
>sp|Q6S4P4|RF2B_ORYSJ Transcription factor RF2b OS=Oryza sativa subsp. japonica GN=RF2b
PE=1 SV=1
Length = 329
Score = 194 bits (492), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/284 (44%), Positives = 165/284 (58%), Gaps = 39/284 (13%)
Query: 74 HDNPPKNVG--HRRAHSEI-LTLPDDISFDSDLGVVGGADGPSLSDETEEDLLSMYLDMD 130
H +P G HRRA SE+ LPDD+ G +E+DL S ++D++
Sbjct: 6 HTDPAAMRGAHHRRARSEVAFRLPDDLDLGGGGAGAFDEIG------SEDDLFSTFMDIE 59
Query: 131 KFNASTATSGFQVGEPSAAAAPAPTSAAAAGSGISSVENVGVGSTERPRIRHQHSQSMDG 190
K ++ A +G S + ++ PR +H+HS S+DG
Sbjct: 60 KISSGPAAAG------------------------GSDRDRAAETSSPPRPKHRHSSSVDG 95
Query: 191 STSIKPEMLMSASDEAPSADSKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMR 250
S +A+ A ++KKAM+ +L++LA IDPKRAKRI ANRQSAARSKERK R
Sbjct: 96 SGFFAAARKDAAASLAEVMEAKKAMTPEQLSDLAAIDPKRAKRILANRQSAARSKERKAR 155
Query: 251 YIAELERKVQTLQTEATSLSAQLTLLQRDTNGLTAENSELKLRLQTMEQQVHLQDALNDA 310
YI ELERKVQTLQTEAT+LSAQLTL QRDT GL+AEN+ELK+RLQ MEQQ L+DALNDA
Sbjct: 156 YITELERKVQTLQTEATTLSAQLTLFQRDTTGLSAENAELKIRLQAMEQQAQLRDALNDA 215
Query: 311 LKEEIQHLKVLTGQAMPNGGPMMNYPSFGAGQQFYPNNQAMHTL 354
LK+E++ LK+ TG+ M N ++ G Q P N L
Sbjct: 216 LKQELERLKLATGE-MTNSN-----ETYSMGLQHVPYNTPFFPL 253
>sp|Q9MA75|VIP1_ARATH Transcription factor VIP1 OS=Arabidopsis thaliana GN=VIP1 PE=1 SV=1
Length = 341
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 127/201 (63%), Gaps = 10/201 (4%)
Query: 163 GISSVENVGVGSTERPRIRHQHSQS--MDG---STSIKPEMLMSASDEAPSADSKKAMSA 217
G++ + + S E+ + H HS+S MDG S S E ++++ S M
Sbjct: 125 GVTEEKFIATSSGEKKKGNHHHSRSNSMDGEMSSASFNIESILASVSGKDSGKKNMGMGG 184
Query: 218 AKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQ 277
+LAELAL+DPKRAKRI ANRQSAARSKERK+RY ELERKVQTLQ EAT+LSAQ+T+LQ
Sbjct: 185 DRLAELALLDPKRAKRILANRQSAARSKERKIRYTGELERKVQTLQNEATTLSAQVTMLQ 244
Query: 278 RDTNGLTAENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKVLTGQAMPNGGPMMNYPS 337
R T+ L EN LK+RLQ +EQQ L+DALN+AL++E+ LKV+ G+ G N
Sbjct: 245 RGTSELNTENKHLKMRLQALEQQAELRDALNEALRDELNRLKVVAGEIPQGNGNSYNRAQ 304
Query: 338 FGAGQ----QF-YPNNQAMHT 353
F + Q QF NQ M T
Sbjct: 305 FSSQQSAMNQFGNKTNQQMST 325
>sp|Q99090|CPRF2_PETCR Light-inducible protein CPRF2 OS=Petroselinum crispum GN=CPRF2 PE=2
SV=2
Length = 401
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%)
Query: 227 DPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLTAE 286
D KR +R+ +NR+SA RS+ RK ++ ELE +V L+ E +SL +LT + + N +
Sbjct: 198 DAKRVRRMLSNRESARRSRRRKQAHMTELETQVSQLRVENSSLLKRLTDISQRYNDAAVD 257
Query: 287 NSELKLRLQTMEQQVHL 303
N LK ++TM +V +
Sbjct: 258 NRVLKADIETMRAKVKM 274
>sp|B9DGI8|BZP63_ARATH Basic leucine zipper 63 OS=Arabidopsis thaliana GN=BZIP63 PE=1 SV=1
Length = 314
Score = 37.0 bits (84), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 32/209 (15%)
Query: 129 MDKFNASTATSGF-QVGEPSAAAAPAPTSAAAAGSGISSVENVGVGSTE-RPRIRHQ--- 183
M N S + F + + S+AAA S A G +SS NV V S E R ++ +
Sbjct: 21 MTSLNRSASEWAFNRFIQESSAAADDGESTTACGVSVSSPPNVPVDSEEYRAFLKSKLNL 80
Query: 184 --HSQSMDGSTSIKPEMLMSASDEAPSADSKKA----------MSAAKLAELAL------ 225
+ +M T IKP+ SD + +S++A MS+A + L
Sbjct: 81 ACAAVAMKRGTFIKPQDTSGRSDNGGANESEQASLASSKATPMMSSAITSGSELSGDEEE 140
Query: 226 ---------IDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLL 276
+ KR KR+ +NR+SA RS+ RK +++ELE +V L+ E + L LT +
Sbjct: 141 ADGETNMNPTNVKRVKRMLSNRESARRSRRRKQAHLSELETQVSQLRVENSKLMKGLTDV 200
Query: 277 QRDTNGLTAENSELKLRLQTMEQQVHLQD 305
+ N + EN LK ++T+ +V + +
Sbjct: 201 TQTFNDASVENRVLKANIETLRAKVKMAE 229
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.308 0.123 0.341
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 160,559,385
Number of Sequences: 539616
Number of extensions: 7076402
Number of successful extensions: 109781
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1262
Number of HSP's successfully gapped in prelim test: 722
Number of HSP's that attempted gapping in prelim test: 42233
Number of HSP's gapped (non-prelim): 22181
length of query: 426
length of database: 191,569,459
effective HSP length: 120
effective length of query: 306
effective length of database: 126,815,539
effective search space: 38805554934
effective search space used: 38805554934
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 63 (28.9 bits)