Query 014329
Match_columns 426
No_of_seqs 113 out of 789
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 04:04:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014329.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014329hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1479 Nucleoside transporter 100.0 9.2E-79 2E-83 606.2 28.0 390 26-426 8-404 (406)
2 TIGR00939 2a57 Equilibrative N 100.0 4E-74 8.7E-79 591.2 31.1 375 41-425 1-432 (437)
3 PF01733 Nucleoside_tran: Nucl 100.0 1.5E-58 3.2E-63 457.3 -0.5 277 139-425 1-308 (309)
4 PF02487 CLN3: CLN3 protein; 99.9 2.4E-25 5.2E-30 224.6 21.0 357 37-424 1-394 (402)
5 KOG3880 Predicted small molecu 99.8 2.1E-20 4.6E-25 178.7 8.9 354 37-423 13-400 (409)
6 TIGR00893 2A0114 d-galactonate 98.4 6.1E-05 1.3E-09 74.6 23.3 336 53-421 11-367 (399)
7 TIGR00895 2A0115 benzoate tran 98.4 5.9E-05 1.3E-09 75.3 22.7 106 310-421 288-394 (398)
8 TIGR00881 2A0104 phosphoglycer 98.4 2.1E-05 4.6E-10 77.8 18.9 339 50-420 9-365 (379)
9 TIGR00892 2A0113 monocarboxyla 98.3 7.3E-05 1.6E-09 77.9 21.3 108 309-420 278-388 (455)
10 TIGR00900 2A0121 H+ Antiporter 98.3 0.00016 3.4E-09 71.3 21.6 309 73-421 37-357 (365)
11 PRK11551 putative 3-hydroxyphe 98.3 0.00025 5.3E-09 72.0 23.6 105 311-421 259-364 (406)
12 TIGR00879 SP MFS transporter, 98.2 0.00077 1.7E-08 68.7 25.4 104 74-191 75-183 (481)
13 TIGR00890 2A0111 Oxalate/Forma 98.2 0.00054 1.2E-08 67.7 23.0 333 37-420 5-350 (377)
14 PRK11663 regulatory protein Uh 98.1 0.00065 1.4E-08 70.1 23.5 100 73-189 61-165 (434)
15 PRK10489 enterobactin exporter 98.1 0.00091 2E-08 68.4 24.2 303 73-421 55-368 (417)
16 TIGR00891 2A0112 putative sial 98.1 0.0036 7.7E-08 62.8 28.0 126 48-190 24-155 (405)
17 PF07690 MFS_1: Major Facilita 98.1 0.00024 5.2E-09 69.8 19.0 325 51-417 11-351 (352)
18 PRK11273 glpT sn-glycerol-3-ph 98.1 0.00099 2.2E-08 69.1 22.9 115 55-178 48-168 (452)
19 PRK08633 2-acyl-glycerophospho 98.0 0.00049 1.1E-08 79.4 22.0 315 74-421 51-378 (1146)
20 TIGR01299 synapt_SV2 synaptic 98.0 0.0054 1.2E-07 67.9 28.9 105 311-421 599-704 (742)
21 KOG4255 Uncharacterized conser 97.9 0.0014 3.1E-08 64.4 19.3 191 36-236 11-216 (439)
22 PRK10213 nepI ribonucleoside t 97.9 0.0059 1.3E-07 62.3 24.3 104 311-421 256-360 (394)
23 TIGR00710 efflux_Bcr_CflA drug 97.8 0.0055 1.2E-07 61.1 22.8 106 50-167 19-126 (385)
24 TIGR00712 glpT glycerol-3-phos 97.8 0.0024 5.2E-08 66.0 20.0 139 36-189 27-172 (438)
25 PRK03545 putative arabinose tr 97.8 0.012 2.5E-07 59.6 24.6 108 59-178 32-145 (390)
26 COG2814 AraJ Arabinose efflux 97.8 0.0048 1E-07 63.0 21.3 294 76-421 54-355 (394)
27 PRK05122 major facilitator sup 97.8 0.013 2.9E-07 59.2 24.7 103 61-167 41-145 (399)
28 PRK11652 emrD multidrug resist 97.7 0.017 3.7E-07 58.4 24.7 55 366-421 300-354 (394)
29 cd06174 MFS The Major Facilita 97.7 0.017 3.7E-07 56.1 23.3 298 50-421 13-321 (352)
30 COG0738 FucP Fucose permease [ 97.7 0.0023 5E-08 64.9 17.1 129 24-166 5-135 (422)
31 TIGR00898 2A0119 cation transp 97.6 0.02 4.3E-07 60.0 24.3 103 313-420 361-465 (505)
32 PRK10077 xylE D-xylose transpo 97.6 0.031 6.8E-07 57.9 24.9 94 74-167 59-153 (479)
33 PRK09874 drug efflux system pr 97.6 0.03 6.5E-07 56.5 23.8 105 311-421 262-367 (408)
34 PLN00028 nitrate transmembrane 97.6 0.054 1.2E-06 56.8 26.4 56 59-114 59-115 (476)
35 PRK12382 putative transporter; 97.5 0.041 8.9E-07 55.5 24.6 102 313-421 255-358 (392)
36 PRK12307 putative sialic acid 97.5 0.044 9.4E-07 55.9 24.9 113 59-188 41-159 (426)
37 TIGR00885 fucP L-fucose:H+ sym 97.5 0.0098 2.1E-07 61.2 20.1 131 35-178 6-142 (410)
38 TIGR00886 2A0108 nitrite extru 97.5 0.023 4.9E-07 56.4 22.2 106 51-167 16-123 (366)
39 PRK09556 uhpT sugar phosphate 97.5 0.0042 9E-08 64.8 17.0 121 58-190 51-177 (467)
40 TIGR00711 efflux_EmrB drug res 97.5 0.022 4.7E-07 59.0 22.2 108 311-421 295-404 (485)
41 TIGR00883 2A0106 metabolite-pr 97.5 0.009 2E-07 59.3 18.6 103 311-417 259-365 (394)
42 PRK15402 multidrug efflux syst 97.5 0.021 4.5E-07 58.0 21.4 121 35-167 12-134 (406)
43 PRK10133 L-fucose transporter; 97.5 0.031 6.6E-07 58.1 22.7 135 38-190 32-172 (438)
44 PF05977 MFS_3: Transmembrane 97.4 0.027 5.8E-07 60.1 22.3 324 41-421 15-363 (524)
45 PRK03699 putative transporter; 97.4 0.041 8.9E-07 55.8 22.1 79 77-167 49-128 (394)
46 KOG2504 Monocarboxylate transp 97.3 0.013 2.9E-07 62.2 17.6 101 311-417 337-440 (509)
47 PRK10504 putative transporter; 97.3 0.076 1.7E-06 55.0 23.1 52 370-421 358-409 (471)
48 TIGR00887 2A0109 phosphate:H+ 97.2 0.15 3.2E-06 53.7 25.3 90 73-168 59-149 (502)
49 COG2271 UhpC Sugar phosphate p 97.2 0.1 2.2E-06 53.6 22.6 321 49-421 42-399 (448)
50 PRK10642 proline/glycine betai 97.2 0.2 4.3E-06 52.6 25.6 85 85-178 72-166 (490)
51 PRK06814 acylglycerophosphoeth 97.1 0.058 1.3E-06 62.6 22.3 310 75-422 57-391 (1140)
52 TIGR00899 2A0120 sugar efflux 97.1 0.13 2.9E-06 51.0 21.8 55 366-421 289-343 (375)
53 TIGR02332 HpaX 4-hydroxyphenyl 97.1 0.18 3.8E-06 51.7 23.0 116 58-190 30-151 (412)
54 KOG2533 Permease of the major 97.0 0.027 5.9E-07 59.5 17.1 197 73-288 84-290 (495)
55 PF06609 TRI12: Fungal trichot 97.0 0.16 3.4E-06 54.9 22.9 102 315-421 357-461 (599)
56 TIGR00902 2A0127 phenyl propri 97.0 0.11 2.4E-06 52.4 21.1 99 312-421 245-349 (382)
57 PRK11102 bicyclomycin/multidru 97.0 0.14 2.9E-06 51.2 21.3 80 75-166 31-111 (377)
58 TIGR00894 2A0114euk Na(+)-depe 97.0 0.14 3.1E-06 53.0 21.7 94 75-178 81-179 (465)
59 PRK11128 putative 3-phenylprop 96.9 0.14 3.1E-06 51.6 20.9 102 313-420 246-348 (382)
60 TIGR00792 gph sugar (Glycoside 96.9 0.4 8.8E-06 48.9 23.9 105 312-421 262-374 (437)
61 PRK15011 sugar efflux transpor 96.8 0.26 5.7E-06 49.9 21.7 52 369-421 309-360 (393)
62 PRK03893 putative sialic acid 96.8 0.28 6.1E-06 51.0 22.3 114 53-178 37-156 (496)
63 PRK11902 ampG muropeptide tran 96.8 0.74 1.6E-05 46.7 24.9 134 40-190 3-149 (402)
64 PRK14995 methyl viologen resis 96.8 0.32 6.9E-06 51.2 22.6 56 366-421 352-407 (495)
65 TIGR00901 2A0125 AmpG-related 96.7 0.11 2.5E-06 51.5 18.0 40 366-405 310-349 (356)
66 PRK11043 putative transporter; 96.7 0.89 1.9E-05 45.9 24.3 111 45-167 15-127 (401)
67 TIGR02718 sider_RhtX_FptX side 96.6 0.91 2E-05 45.8 24.2 29 38-66 3-31 (390)
68 PRK10473 multidrug efflux syst 96.6 0.65 1.4E-05 46.8 22.6 106 50-167 17-124 (392)
69 PRK03633 putative MFS family t 96.6 0.87 1.9E-05 45.8 23.5 101 311-421 239-341 (381)
70 PRK10091 MFS transport protein 96.6 0.79 1.7E-05 46.2 23.1 126 37-178 8-139 (382)
71 TIGR00897 2A0118 polyol permea 96.6 0.74 1.6E-05 46.8 23.0 106 311-421 261-370 (402)
72 TIGR00882 2A0105 oligosacchari 96.3 0.57 1.2E-05 47.4 20.4 53 366-418 308-361 (396)
73 TIGR01272 gluP glucose/galacto 96.1 0.41 8.8E-06 47.3 17.7 244 134-407 9-271 (310)
74 TIGR00903 2A0129 major facilit 96.1 0.76 1.6E-05 46.5 19.8 122 52-190 7-133 (368)
75 PRK10429 melibiose:sodium symp 96.0 0.15 3.2E-06 53.4 14.6 107 50-163 245-352 (473)
76 TIGR00896 CynX cyanate transpo 96.0 0.62 1.3E-05 46.2 18.5 108 58-178 22-134 (355)
77 PF13347 MFS_2: MFS/sugar tran 96.0 1.2 2.6E-05 45.7 20.9 60 363-422 313-379 (428)
78 PRK09952 shikimate transporter 96.0 2.1 4.5E-05 44.2 22.7 91 88-189 82-179 (438)
79 PRK09528 lacY galactoside perm 95.9 0.32 6.9E-06 49.7 16.0 36 366-401 316-351 (420)
80 PRK09705 cynX putative cyanate 95.9 2.4 5.2E-05 43.0 22.8 113 41-166 14-129 (393)
81 PRK10054 putative transporter; 95.8 1.9 4E-05 43.9 21.4 38 78-115 51-88 (395)
82 PRK11195 lysophospholipid tran 95.8 2.6 5.7E-05 42.7 23.2 80 72-166 40-120 (393)
83 PRK11010 ampG muropeptide tran 95.8 2.3 5E-05 44.8 22.4 135 38-189 14-161 (491)
84 KOG2532 Permease of the major 95.8 1.6 3.4E-05 46.0 20.7 83 74-166 77-159 (466)
85 TIGR00924 yjdL_sub1_fam amino 95.7 2.3 5E-05 44.6 21.9 61 363-423 379-439 (475)
86 KOG2563 Permease of the major 95.7 3.2 6.9E-05 43.2 21.8 126 32-167 41-173 (480)
87 PF13347 MFS_2: MFS/sugar tran 95.6 0.55 1.2E-05 48.2 16.6 106 48-163 237-343 (428)
88 PRK15403 multidrug efflux syst 95.6 3.3 7.1E-05 42.4 25.3 92 75-178 56-152 (413)
89 TIGR00805 oat sodium-independe 95.5 1.4 3.1E-05 48.1 20.1 121 58-178 55-220 (633)
90 PRK09848 glucuronide transport 95.4 0.53 1.1E-05 48.6 15.8 104 49-162 241-346 (448)
91 KOG2325 Predicted transporter/ 95.3 0.18 3.8E-06 53.1 11.8 129 57-197 56-191 (488)
92 PRK11646 multidrug resistance 95.3 4 8.6E-05 41.6 24.1 53 368-420 300-352 (400)
93 PRK15075 citrate-proton sympor 95.1 4.6 9.9E-05 41.5 22.1 75 86-166 72-149 (434)
94 TIGR00889 2A0110 nucleoside tr 94.6 2.1 4.5E-05 44.1 17.4 108 311-421 255-365 (418)
95 KOG0569 Permease of the major 94.6 6.6 0.00014 41.5 20.9 145 73-236 63-210 (485)
96 PRK09669 putative symporter Ya 94.4 7 0.00015 40.2 23.8 56 366-421 320-382 (444)
97 PRK09669 putative symporter Ya 93.7 1.9 4E-05 44.5 14.9 95 58-162 251-346 (444)
98 TIGR00792 gph sugar (Glycoside 93.6 1.8 3.8E-05 44.1 14.3 102 50-162 236-338 (437)
99 PRK10207 dipeptide/tripeptide 93.0 14 0.0003 39.0 23.5 58 364-421 378-435 (489)
100 PRK11462 putative transporter; 93.0 1.2 2.6E-05 46.5 12.2 48 53-100 245-293 (460)
101 PTZ00207 hypothetical protein; 92.6 3.1 6.7E-05 45.1 14.9 82 91-178 82-167 (591)
102 TIGR00879 SP MFS transporter, 92.6 0.87 1.9E-05 46.2 10.3 110 309-421 73-183 (481)
103 PLN00028 nitrate transmembrane 92.0 4.5 9.8E-05 42.3 15.1 30 139-168 352-381 (476)
104 PRK10489 enterobactin exporter 91.8 12 0.00026 38.0 17.6 80 77-168 266-346 (417)
105 KOG4686 Predicted sugar transp 91.5 0.78 1.7E-05 45.2 7.8 57 365-421 352-408 (459)
106 TIGR00902 2A0127 phenyl propri 91.4 6 0.00013 39.8 14.8 79 78-168 248-326 (382)
107 PRK10504 putative transporter; 91.3 4.1 8.9E-05 42.1 13.8 36 78-113 305-340 (471)
108 PRK11551 putative 3-hydroxyphe 91.2 3 6.5E-05 42.0 12.5 81 75-167 260-341 (406)
109 PF11700 ATG22: Vacuole efflux 91.2 22 0.00048 37.5 22.6 103 309-414 319-426 (477)
110 cd06174 MFS The Major Facilita 90.3 1.3 2.8E-05 42.8 8.5 108 309-423 36-145 (352)
111 PRK11102 bicyclomycin/multidru 90.1 1.8 4E-05 43.0 9.6 34 77-110 237-270 (377)
112 TIGR00806 rfc RFC reduced fola 90.1 29 0.00062 36.9 18.5 119 58-193 48-172 (511)
113 TIGR00892 2A0113 monocarboxyla 89.8 5.4 0.00012 41.4 13.1 30 138-167 336-366 (455)
114 PRK09584 tppB putative tripept 89.7 30 0.00065 36.5 23.6 58 363-420 380-437 (500)
115 TIGR00788 fbt folate/biopterin 89.6 29 0.00063 36.3 21.3 56 366-421 352-407 (468)
116 PF03825 Nuc_H_symport: Nucleo 89.5 27 0.00059 35.8 21.1 50 372-421 308-358 (400)
117 PRK11646 multidrug resistance 89.1 1.2 2.6E-05 45.3 7.5 141 274-421 13-155 (400)
118 PF03825 Nuc_H_symport: Nucleo 89.0 8.6 0.00019 39.5 13.6 140 79-233 252-397 (400)
119 PRK10406 alpha-ketoglutarate t 88.9 30 0.00064 35.4 24.0 88 85-178 78-172 (432)
120 PRK10213 nepI ribonucleoside t 87.7 5.1 0.00011 40.7 11.0 105 311-422 59-165 (394)
121 TIGR00898 2A0119 cation transp 87.6 3 6.5E-05 43.6 9.4 112 306-423 126-238 (505)
122 TIGR00900 2A0121 H+ Antiporter 87.4 2.6 5.7E-05 41.1 8.5 112 309-422 36-149 (365)
123 PRK09556 uhpT sugar phosphate 87.4 34 0.00074 35.4 17.2 54 47-100 269-324 (467)
124 KOG3764 Vesicular amine transp 87.2 3.8 8.2E-05 42.2 9.3 91 76-178 109-203 (464)
125 TIGR00894 2A0114euk Na(+)-depe 87.2 7.4 0.00016 40.2 12.1 29 39-67 264-293 (465)
126 KOG0569 Permease of the major 86.8 2 4.4E-05 45.3 7.5 146 73-230 308-454 (485)
127 TIGR00891 2A0112 putative sial 86.5 5.8 0.00013 39.4 10.5 106 311-422 51-157 (405)
128 TIGR00889 2A0110 nucleoside tr 86.1 13 0.00027 38.2 13.0 83 77-167 258-341 (418)
129 PRK11128 putative 3-phenylprop 85.9 19 0.00042 36.0 14.0 77 79-167 249-325 (382)
130 PRK15034 nitrate/nitrite trans 85.8 50 0.0011 34.7 23.3 115 41-166 42-159 (462)
131 TIGR00710 efflux_Bcr_CflA drug 85.7 4.9 0.00011 39.8 9.4 105 311-421 44-149 (385)
132 TIGR01301 GPH_sucrose GPH fami 85.5 53 0.0011 34.7 23.2 53 366-418 381-435 (477)
133 TIGR00895 2A0115 benzoate tran 84.9 7 0.00015 38.6 10.1 106 51-168 265-372 (398)
134 TIGR00886 2A0108 nitrite extru 84.8 4.5 9.7E-05 39.8 8.7 105 311-421 41-146 (366)
135 COG2211 MelB Na+/melibiose sym 84.7 32 0.00069 36.3 14.9 128 51-195 251-380 (467)
136 TIGR00880 2_A_01_02 Multidrug 84.4 2.8 6.2E-05 34.3 6.0 57 366-422 52-108 (141)
137 PRK09528 lacY galactoside perm 84.3 26 0.00056 35.6 14.2 79 78-168 270-349 (420)
138 PRK12382 putative transporter; 84.0 5.5 0.00012 40.0 9.0 147 274-421 18-168 (392)
139 PRK11902 ampG muropeptide tran 83.9 10 0.00022 38.4 11.0 23 144-166 316-339 (402)
140 KOG1330 Sugar transporter/spin 83.7 37 0.0008 35.7 14.7 135 72-235 70-213 (493)
141 PRK11010 ampG muropeptide tran 83.4 24 0.00052 37.1 13.9 20 81-100 270-289 (491)
142 KOG2533 Permease of the major 83.4 18 0.00038 38.5 12.7 66 39-104 276-345 (495)
143 TIGR00893 2A0114 d-galactonate 83.4 4.2 9.2E-05 39.8 7.7 106 310-422 32-139 (399)
144 PRK09952 shikimate transporter 82.8 20 0.00044 36.8 12.8 27 141-167 349-376 (438)
145 PRK05122 major facilitator sup 82.7 3.6 7.8E-05 41.4 7.1 116 306-421 50-168 (399)
146 PF07690 MFS_1: Major Facilita 82.4 5.4 0.00012 38.7 8.0 106 311-423 36-143 (352)
147 PRK09874 drug efflux system pr 82.4 10 0.00022 37.9 10.3 104 311-421 58-162 (408)
148 PRK15402 multidrug efflux syst 82.1 15 0.00032 37.0 11.4 73 80-159 261-333 (406)
149 PF03209 PUCC: PUCC protein; 82.1 66 0.0014 33.2 22.3 106 310-420 247-360 (403)
150 TIGR00887 2A0109 phosphate:H+ 82.0 6.4 0.00014 41.3 8.9 112 311-423 60-173 (502)
151 KOG0252 Inorganic phosphate tr 81.6 17 0.00036 38.3 11.2 82 34-116 36-130 (538)
152 PRK09584 tppB putative tripept 81.6 30 0.00064 36.6 13.7 74 91-167 341-415 (500)
153 COG2223 NarK Nitrate/nitrite t 81.3 26 0.00057 36.2 12.5 102 59-165 242-345 (417)
154 PRK10054 putative transporter; 80.0 9.2 0.0002 38.8 9.0 144 273-423 9-154 (395)
155 PRK10642 proline/glycine betai 80.0 24 0.00051 36.9 12.3 52 50-101 264-317 (490)
156 TIGR00712 glpT glycerol-3-phos 79.3 13 0.00029 38.1 10.0 51 368-418 121-171 (438)
157 PRK08633 2-acyl-glycerophospho 79.3 61 0.0013 37.6 16.5 85 74-170 273-358 (1146)
158 TIGR00890 2A0111 Oxalate/Forma 79.2 18 0.00039 35.2 10.6 41 75-115 245-285 (377)
159 TIGR01299 synapt_SV2 synaptic 79.1 7.9 0.00017 43.2 8.6 106 311-422 206-312 (742)
160 PF01306 LacY_symp: LacY proto 78.8 49 0.0011 34.3 13.7 173 39-233 223-403 (412)
161 TIGR00711 efflux_EmrB drug res 78.7 7.4 0.00016 40.1 7.9 104 312-421 42-146 (485)
162 COG2211 MelB Na+/melibiose sym 77.7 99 0.0021 32.6 20.9 57 366-422 328-391 (467)
163 TIGR01272 gluP glucose/galacto 77.4 26 0.00055 34.5 11.0 78 76-166 184-262 (310)
164 TIGR02332 HpaX 4-hydroxyphenyl 77.1 11 0.00025 38.4 8.7 105 311-421 47-152 (412)
165 PRK10473 multidrug efflux syst 76.8 24 0.00053 35.2 10.9 38 77-114 246-283 (392)
166 TIGR00881 2A0104 phosphoglycer 76.6 27 0.00059 33.9 11.0 31 75-105 257-287 (379)
167 PRK10091 MFS transport protein 76.5 12 0.00026 37.6 8.5 103 311-419 42-145 (382)
168 PRK03545 putative arabinose tr 76.4 17 0.00037 36.4 9.7 59 364-422 96-154 (390)
169 PRK11663 regulatory protein Uh 76.1 16 0.00035 37.4 9.5 105 311-421 62-167 (434)
170 PF03209 PUCC: PUCC protein; 75.9 1E+02 0.0022 31.9 16.4 147 74-233 248-400 (403)
171 PRK03633 putative MFS family t 75.7 13 0.00028 37.2 8.5 108 308-421 42-150 (381)
172 PRK09848 glucuronide transport 75.2 1E+02 0.0022 31.5 27.3 56 366-421 320-382 (448)
173 PRK15403 multidrug efflux syst 75.1 17 0.00038 37.0 9.4 105 311-421 55-160 (413)
174 COG2814 AraJ Arabinose efflux 73.4 13 0.00029 38.1 7.9 141 270-417 12-153 (394)
175 KOG2325 Predicted transporter/ 73.1 14 0.0003 39.1 8.0 151 270-423 33-191 (488)
176 KOG3098 Uncharacterized conser 73.0 1.3E+02 0.0028 31.7 15.5 37 134-170 352-389 (461)
177 PRK11652 emrD multidrug resist 72.6 24 0.00052 35.3 9.6 104 311-420 47-151 (394)
178 PRK11273 glpT sn-glycerol-3-ph 72.5 22 0.00047 36.7 9.5 102 311-414 67-169 (452)
179 KOG3762 Predicted transporter 72.5 28 0.0006 37.4 10.0 163 36-230 375-549 (618)
180 KOG4686 Predicted sugar transp 72.4 83 0.0018 31.4 12.4 173 33-230 261-442 (459)
181 TIGR00883 2A0106 metabolite-pr 72.1 21 0.00045 35.0 8.9 29 139-167 316-345 (394)
182 PRK12307 putative sialic acid 71.1 28 0.00061 35.1 9.8 106 310-421 56-162 (426)
183 PRK06814 acylglycerophosphoeth 70.5 38 0.00083 39.5 11.8 109 59-168 249-368 (1140)
184 TIGR00880 2_A_01_02 Multidrug 70.2 55 0.0012 26.3 10.4 77 79-167 7-84 (141)
185 KOG0255 Synaptic vesicle trans 69.3 25 0.00055 36.9 9.3 113 305-423 116-229 (521)
186 KOG3626 Organic anion transpor 68.8 1.5E+02 0.0033 33.1 15.0 303 41-356 106-487 (735)
187 KOG0255 Synaptic vesicle trans 67.9 1.6E+02 0.0035 30.8 20.5 84 74-169 122-206 (521)
188 TIGR00924 yjdL_sub1_fam amino 67.5 1.6E+02 0.0034 30.8 14.7 140 36-178 272-429 (475)
189 PRK03699 putative transporter; 67.2 1.4E+02 0.0031 29.8 18.6 44 58-101 228-272 (394)
190 PRK10429 melibiose:sodium symp 67.1 1.6E+02 0.0035 30.5 26.3 55 367-421 326-387 (473)
191 PRK10077 xylE D-xylose transpo 65.5 33 0.00071 35.3 9.1 111 310-422 58-177 (479)
192 PRK10406 alpha-ketoglutarate t 65.2 54 0.0012 33.5 10.5 55 367-421 126-180 (432)
193 KOG0254 Predicted transporter 64.6 1.7E+02 0.0037 30.7 14.4 82 73-166 92-173 (513)
194 PRK11195 lysophospholipid tran 64.6 20 0.00043 36.3 7.1 53 369-421 92-144 (393)
195 PRK15034 nitrate/nitrite trans 64.1 64 0.0014 34.0 10.8 105 313-419 76-181 (462)
196 PRK10207 dipeptide/tripeptide 64.0 1.4E+02 0.0031 31.4 13.6 69 98-168 344-413 (489)
197 PRK15462 dipeptide/tripeptide 63.9 2E+02 0.0044 30.5 15.8 131 34-167 266-409 (493)
198 PRK15011 sugar efflux transpor 63.9 1.6E+02 0.0036 29.4 16.6 20 81-100 263-282 (393)
199 TIGR00882 2A0105 oligosacchari 62.5 1.4E+02 0.0031 29.8 12.9 73 83-167 267-340 (396)
200 PRK03893 putative sialic acid 61.3 71 0.0015 33.0 10.7 105 311-421 59-164 (496)
201 TIGR00885 fucP L-fucose:H+ sym 60.6 1.1E+02 0.0023 31.3 11.7 80 75-167 274-354 (410)
202 PF01306 LacY_symp: LacY proto 59.1 78 0.0017 32.8 10.2 36 362-397 309-344 (412)
203 COG0738 FucP Fucose permease [ 58.5 1.2E+02 0.0026 31.4 11.2 117 36-169 241-358 (422)
204 PF07672 MFS_Mycoplasma: Mycop 58.0 1.3E+02 0.0027 29.3 10.7 106 306-415 140-253 (267)
205 TIGR00901 2A0125 AmpG-related 57.2 49 0.0011 32.5 8.3 56 368-423 86-141 (356)
206 PRK15075 citrate-proton sympor 55.5 1.2E+02 0.0026 30.9 11.1 53 369-421 121-173 (434)
207 TIGR01301 GPH_sucrose GPH fami 54.5 2.9E+02 0.0062 29.2 15.2 90 76-165 311-410 (477)
208 PRK11462 putative transporter; 53.8 2.8E+02 0.006 28.8 24.4 40 139-178 113-158 (460)
209 PTZ00207 hypothetical protein; 53.1 2.8E+02 0.0061 30.2 13.7 24 141-164 458-482 (591)
210 PF00083 Sugar_tr: Sugar (and 52.9 3.6 7.9E-05 42.1 -0.7 114 307-423 46-160 (451)
211 PF13038 DUF3899: Domain of un 50.6 60 0.0013 25.8 6.3 19 267-285 66-84 (92)
212 PRK11043 putative transporter; 49.2 1.4E+02 0.003 29.8 10.2 133 280-419 15-148 (401)
213 PF05978 UNC-93: Ion channel r 49.0 1.2E+02 0.0026 26.9 8.4 110 305-424 39-148 (156)
214 PRK14995 methyl viologen resis 48.7 1.1E+02 0.0025 31.8 9.8 84 333-422 68-152 (495)
215 PF09050 SNN_linker: Stannin u 48.0 17 0.00036 21.6 1.8 17 3-19 3-19 (26)
216 PRK10133 L-fucose transporter; 47.2 3.4E+02 0.0073 27.9 14.7 78 75-165 300-378 (438)
217 PF03547 Mem_trans: Membrane t 46.2 3.2E+02 0.0069 27.4 12.3 42 313-356 285-326 (385)
218 TIGR02718 sider_RhtX_FptX side 45.5 2.7E+02 0.0059 27.6 11.7 28 82-109 256-283 (390)
219 KOG3098 Uncharacterized conser 45.4 3.9E+02 0.0085 28.2 16.8 41 138-178 105-149 (461)
220 TIGR00806 rfc RFC reduced fola 45.4 67 0.0015 34.2 7.2 59 364-423 114-172 (511)
221 KOG2504 Monocarboxylate transp 45.0 2.7E+02 0.0059 29.6 11.9 105 40-156 299-409 (509)
222 TIGR00897 2A0118 polyol permea 44.1 3.4E+02 0.0074 27.1 16.9 24 78-101 265-288 (402)
223 TIGR00899 2A0120 sugar efflux 43.2 3.2E+02 0.0069 26.5 13.9 26 141-166 294-320 (375)
224 KOG0254 Predicted transporter 40.9 1E+02 0.0022 32.4 8.1 106 311-422 93-199 (513)
225 KOG3574 Acetyl-CoA transporter 37.4 5.1E+02 0.011 27.1 14.3 39 140-178 138-181 (510)
226 KOG2532 Permease of the major 36.0 2.3E+02 0.0049 29.9 9.5 181 36-231 258-447 (466)
227 TIGR00896 CynX cyanate transpo 34.7 4.4E+02 0.0095 25.6 11.3 41 74-114 236-277 (355)
228 PF03092 BT1: BT1 family; Int 34.2 5.4E+02 0.012 26.5 15.3 42 145-191 100-144 (433)
229 TIGR00903 2A0129 major facilit 33.5 1.7E+02 0.0036 29.5 7.9 59 364-423 78-136 (368)
230 PRK09705 cynX putative cyanate 33.5 5E+02 0.011 25.9 16.9 40 75-114 245-284 (393)
231 PRK13743 conjugal transfer pro 32.4 15 0.00033 31.3 0.1 58 7-64 13-71 (141)
232 PF00083 Sugar_tr: Sugar (and 31.4 1.4 3E-05 45.2 -7.9 39 79-117 295-333 (451)
233 PRK01021 lpxB lipid-A-disaccha 31.3 1E+02 0.0022 33.6 6.0 71 157-235 123-196 (608)
234 PF04144 SCAMP: SCAMP family; 31.1 4E+02 0.0086 24.0 10.5 62 25-89 22-84 (177)
235 TIGR00927 2A1904 K+-dependent 29.2 2.4E+02 0.0051 32.6 8.4 24 145-168 963-986 (1096)
236 TIGR00788 fbt folate/biopterin 27.9 1.3E+02 0.0028 31.4 6.1 84 77-162 295-378 (468)
237 PRK10478 putative PTS system f 27.8 72 0.0016 32.4 4.0 46 141-194 251-297 (359)
238 PF03092 BT1: BT1 family; Int 27.2 1.8E+02 0.0038 30.2 6.9 27 74-100 259-285 (433)
239 KOG2816 Predicted transporter 25.7 1.8E+02 0.0039 30.6 6.6 50 374-423 119-170 (463)
240 PF03137 OATP: Organic Anion T 25.5 22 0.00047 38.2 -0.2 39 73-112 41-80 (539)
241 PF06912 DUF1275: Protein of u 25.2 5.2E+02 0.011 23.5 12.5 113 95-231 74-187 (209)
242 PRK11404 putative PTS system 24.6 1.6E+02 0.0034 31.3 5.9 45 143-195 379-424 (482)
243 COG2978 AbgT Putative p-aminob 23.9 1.9E+02 0.004 30.5 6.0 57 174-232 176-235 (516)
244 COG4769 Predicted membrane pro 23.6 3E+02 0.0066 24.8 6.6 48 141-195 78-126 (181)
245 PF06813 Nodulin-like: Nodulin 22.9 6.7E+02 0.015 24.0 10.0 127 92-234 58-185 (250)
246 PF10587 EF-1_beta_acid: Eukar 22.8 35 0.00077 21.2 0.4 6 10-15 3-8 (28)
247 PRK10297 PTS system N,N'-diace 21.7 1.1E+02 0.0025 32.1 4.2 26 214-244 410-435 (452)
248 PF11700 ATG22: Vacuole efflux 21.7 9.5E+02 0.021 25.2 13.2 112 52-172 297-418 (477)
249 COG2223 NarK Nitrate/nitrite t 21.5 9.3E+02 0.02 25.1 17.6 38 135-172 105-142 (417)
No 1
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=100.00 E-value=9.2e-79 Score=606.16 Aligned_cols=390 Identities=39% Similarity=0.678 Sum_probs=335.1
Q ss_pred CCCCCCCCchhhhHHHHHHhhhhhHHHHHHhchhHhhccccCCCccchhhHHHHHHHHHHHHHHHHHhhcCCCcceEehh
Q 014329 26 HQKPPPDTFHLAYIIYFTLGLGFLLPWNAFITAVDYFSYLYPEASVDRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINV 105 (426)
Q Consensus 26 ~~~~p~d~~~~~y~~f~llGi~~L~pwN~~ita~dyf~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~ 105 (426)
++++|+|+++.+|+.|+++|+|+|+|||+++|+.|||+++||+++..+.|+..|+..+.+..++...+.-+.+.|.|...
T Consensus 8 ~~~~p~d~~~~v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~~ 87 (406)
T KOG1479|consen 8 DSPEPEDGYNLVYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHNSKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTRV 87 (406)
T ss_pred cCCCcccccccHHHHHHHHhcccccchHhhhccHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46679999999999999999999999999999999999999998776666666665555555554444333333355544
Q ss_pred HHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhccCCCHHHHHHHHhccccccccchhH
Q 014329 106 GLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAGELPDRYMQALVAGTAGSALLSAGV 185 (426)
Q Consensus 106 ~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~~fp~~~~~a~~~G~g~a~~~~~Gv 185 (426)
+..+..+..+++++++.++.+++.|...+|+++|++++..|.++|+.|||++|++|.||+||+||+|+||++| |+
T Consensus 88 ~~~l~~~~il~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~P~~ytqavm~G~a~a-----G~ 162 (406)
T KOG1479|consen 88 GYLLSLIAILFIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLFPSEYTQAVMSGQALA-----GT 162 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhcCCHHHHHHHHhcchhH-----hH
Confidence 4554444444445556666667889999999999999999999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHhcccCccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHhhhhhhh----hhhhhhccCCCCcc
Q 014329 186 LVSVLRILTKAVYTQDAIGLRKSANLYFAVGIVVMVICIVFYNVAHRLPVIKYHEDLKIQAV----NEEKEEKGSLTGSM 261 (426)
Q Consensus 186 ~~s~l~ii~~~~~~~~~~~~~~sa~~yF~i~~~~~~~~~~~~~~l~k~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 261 (426)
++|++|+++|++.+|+ ++++.+||+++.+++++|+++|..++|+|++|||++++.++. +++.|+|++.++
T Consensus 163 l~Sl~~i~tka~~~~~----~~sA~~yF~~s~~~~llC~i~y~~l~~lpf~~yy~~~~~~~~~~l~~~~~~~~~~~~~-- 236 (406)
T KOG1479|consen 163 LTSLLRILTKAAFSDS----RTSALIYFITSTVILLLCFVLYLVLPKLPFVRYYREKAGSIGSKLAAEGIESDSSLSN-- 236 (406)
T ss_pred HHHHHHHHHHHhcCCC----CceeehhHHHHHHHHHHHHHHHHHhhcchHHHHHhhhccccccccccccccccccccc--
Confidence 9999999999998654 489999999999999999999999999999999988765431 122233333322
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHhhhhccccceeeecccccCCCchHHHHHHHH-HHhhhhhhhhhhhhhhcccchhHHH
Q 014329 262 WRSAVWHIVGRVKWYGFGILLIYIVTLSIFPGYITEDVHSEILKDWYGIILIAG-YNVFDLVGKSLTAIYLLENEKVAIG 340 (426)
Q Consensus 262 ~~~~~~~v~k~i~~~~l~~fl~f~vTl~vFP~i~~~~~~~~~~~~w~~~~~~~~-FnvgD~iGR~~~~~~~~~~~~~l~~ 340 (426)
...+.|+++||+|.++++++++|+|||++|||+.++..+.+..++|++.+...+ ||++|++||.++.+++++++|++++
T Consensus 237 ~~~~~~~i~~k~~~~~~~i~lvy~VTLsiFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~r~l~i 316 (406)
T KOG1479|consen 237 EDDSLWDIFKKIKDLAFNIFLVYFVTLSIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWPDPRKLTI 316 (406)
T ss_pred ccchHHHHHHHHHHHhhchheeeeeeeEecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCCCCceehH
Confidence 223899999999999999999999999999999887555555679999888888 9999999999999999999999999
Q ss_pred HHHHHHHHHhhhhccccC--CCccccchhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHH
Q 014329 341 GCFARLLFFPLFLGCLHG--PKFFRTEIPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGS 418 (426)
Q Consensus 341 ~s~~R~~fiPlf~~c~~~--p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs 418 (426)
++++|++|||+|.+||++ |.++++|+++++++.++|+||||+++++|++||++++++|||.||++|++++..|+++|+
T Consensus 317 ~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~ 396 (406)
T KOG1479|consen 317 PVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGS 396 (406)
T ss_pred HHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999984 567999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhC
Q 014329 419 IVAWFWVI 426 (426)
Q Consensus 419 ~~s~~~~~ 426 (426)
.+|++|.+
T Consensus 397 ~~s~l~~~ 404 (406)
T KOG1479|consen 397 LLSWVFVI 404 (406)
T ss_pred HHHHHHHH
Confidence 99999974
No 2
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=100.00 E-value=4e-74 Score=591.24 Aligned_cols=375 Identities=35% Similarity=0.590 Sum_probs=322.5
Q ss_pred HHHHhhhhhHHHHHHhchhHhhccccCCCc---------------cchhhHHHHHHHHHHHHHHHHHhhcCCCcceEehh
Q 014329 41 YFTLGLGFLLPWNAFITAVDYFSYLYPEAS---------------VDRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINV 105 (426)
Q Consensus 41 f~llGi~~L~pwN~~ita~dyf~~~~~~~~---------------~~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~ 105 (426)
|+++|+|+|+|||+++||.|||+++|++++ ++++++++.++++++..+.+.++.+|+|.+.|+..
T Consensus 1 f~llG~~~L~pWN~fitA~~Yf~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~i~~~~Ri~~ 80 (437)
T TIGR00939 1 FFMLGVGVLLPWNAFITAPQYFIEYYKYAQNIPEAIPSSSKMWKHFNTYYTLASQLPSLLFNSLNLFLIFRIPVTVRLLG 80 (437)
T ss_pred CEEEeeeccchhHHHhhHHHHHHHHhccCCCCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccchhHH
Confidence 578999999999999999999998876531 35677789999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhccCCCHHHHHHHHhccccccccchhH
Q 014329 106 GLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAGELPDRYMQALVAGTAGSALLSAGV 185 (426)
Q Consensus 106 ~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~~fp~~~~~a~~~G~g~a~~~~~Gv 185 (426)
++++.++.+++..++ +..++ ++..+|+++|+++++.|+++|+.|++.+|+++.||++|+|++|+|||+| |+
T Consensus 81 ~lv~~~~~~~~~~~l--~~~~~--~~~~~f~~~~~~v~~~g~~~~~~q~s~~gla~~fp~~~~~a~~~G~g~a-----Gv 151 (437)
T TIGR00939 81 GLVILLVVVILVMVL--VKVQT--SETGFFVTTMASVVIINSGMALLQGSLFGLAGVFPSTYSSAVMSGQGLA-----GV 151 (437)
T ss_pred HHHHHHHHHHHHhhe--eeecC--CcchHHHHHHHHHHHHHhhhhhhcccchhhcccCCHHHHHHHHhcchhH-----HH
Confidence 999888777765443 33432 3556899999999999999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHhcccCccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHhhhhh----hh------hhhhhhc-
Q 014329 186 LVSVLRILTKAVYTQDAIGLRKSANLYFAVGIVVMVICIVFYNVAHRLPVIKYHEDLKIQ----AV------NEEKEEK- 254 (426)
Q Consensus 186 ~~s~l~ii~~~~~~~~~~~~~~sa~~yF~i~~~~~~~~~~~~~~l~k~p~~~~~~~~~~~----~~------~~~~~~~- 254 (426)
+++++|++++++.+++. +.++++++||+++++++++|+++|..++|+|++|||++++.+ ++ .+++|++
T Consensus 152 ~~s~~~ii~~a~~~~~~-~~~~~a~~YF~~a~~v~l~~i~~~~~l~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (437)
T TIGR00939 152 LTSLAMILVKASGNDSH-GLKKSALGYFGTPCVVQLICIVCYLLLPKLPFARYYLQKKLDKGAGEDETKGELRSKAEQNG 230 (437)
T ss_pred HHHHHHHHHHHhcCCcc-chhhhhhhHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHhhcccccccccccccccccccccc
Confidence 99999999999877654 789999999999999999999999999999999999765321 00 0000100
Q ss_pred --------cC------------CC--CccccchHHHHHHHHHHHHHHHHHHHhhhhccccceeeecccccC-CCc-hHHH
Q 014329 255 --------GS------------LT--GSMWRSAVWHIVGRVKWYGFGILLIYIVTLSIFPGYITEDVHSEI-LKD-WYGI 310 (426)
Q Consensus 255 --------~~------------~~--~~~~~~~~~~v~k~i~~~~l~~fl~f~vTl~vFP~i~~~~~~~~~-~~~-w~~~ 310 (426)
+. .+ +.+.+.++|+++||+|++++++|++|++||++|||++++...++. .++ |+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~kki~~~~~~vf~~F~vTL~vFPgv~~~i~~~~~~~~~~~~~~ 310 (437)
T TIGR00939 231 IPHGGDQPSPTLVLDWEKEPESPDEPQKPLKTSVWVVFTKVWLLAFSVVFVFTVTLSVFPAITTAVTSSGLGLSNWFYPI 310 (437)
T ss_pred cccccccccccccccccccccCCccchhcccCcHHHHHHHHHHHHHHHHHHHHHHHHhcCceEEEeeccCCCCCccHHHH
Confidence 00 00 012357899999999999999999999999999999876443332 344 6999
Q ss_pred HHHHHHHhhhhhhhhhhhhhhcccch--hHHHHHHHHHHHHhhhhccccCC-----CccccchhHHHHHHHHhhhcchhh
Q 014329 311 ILIAGYNVFDLVGKSLTAIYLLENEK--VAIGGCFARLLFFPLFLGCLHGP-----KFFRTEIPVTLLTCLLGLTNGYLT 383 (426)
Q Consensus 311 ~~~~~FnvgD~iGR~~~~~~~~~~~~--~l~~~s~~R~~fiPlf~~c~~~p-----~~~~~d~~~~il~~lfglTnGyl~ 383 (426)
+++++||+||++||.++.+..++++| ++++++++|++|||+|++||++| .++++|+++++++++||+||||++
T Consensus 311 i~~~~fNvgD~vGR~~~~~~~~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy~~ 390 (437)
T TIGR00939 311 ICFLLFNLFDWLGRSLTSKFMWPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGYLG 390 (437)
T ss_pred HHHHHHHHHHHHHhhhhheeEeeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhHHH
Confidence 99999999999999999888786655 88999999999999999999875 378999999999999999999999
Q ss_pred hheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHHHHhh
Q 014329 384 SVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVAWFWV 425 (426)
Q Consensus 384 t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s~~~~ 425 (426)
|++|+++|++++++|||.||++|++++++|+++||.+|+++.
T Consensus 391 s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~~ 432 (437)
T TIGR00939 391 SLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLFV 432 (437)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999874
No 3
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=100.00 E-value=1.5e-58 Score=457.32 Aligned_cols=277 Identities=33% Similarity=0.590 Sum_probs=4.0
Q ss_pred HHHHHHhhhhhhhhhhhhhhhccCCCHHHHHHHHhccccccccchhHHHHHHHHHHHHhcccCccccchhHHHHHHHHHH
Q 014329 139 VGAVALSGLADALVQGGLIGAAGELPDRYMQALVAGTAGSALLSAGVLVSVLRILTKAVYTQDAIGLRKSANLYFAVGIV 218 (426)
Q Consensus 139 l~~v~~~g~~~~~~q~s~~~la~~fp~~~~~a~~~G~g~a~~~~~Gv~~s~l~ii~~~~~~~~~~~~~~sa~~yF~i~~~ 218 (426)
|+.++++|+++|++|+++||++|.||++|+|++|+|||+| |++++++|+++++..++ .+.++++||+++++
T Consensus 1 m~~v~~~~~~~~~~q~s~~glas~~p~~y~~a~~~Gq~~a-----Gv~~s~l~ii~~~~~~~----~~~~a~~yF~~a~~ 71 (309)
T PF01733_consen 1 MISVALIGFANAVLQSSLFGLASLFPPKYTQAVMIGQGLA-----GVIVSLLRIITKASGSD----VKTSAFIYFIIAVL 71 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CEEEEEEHhhhHHHhccHHHHHhcCCHHHHHHHHhhccHH-----HHHHHHHHHHHHHhhhc----cchhhhhHHHHHHH
Confidence 4567788999999999999999999999999999999999 99999999999998643 78999999999999
Q ss_pred HHHHHHHHHHHhhcchhhHHHHhhhh----hhhhhhh----h-hc-cCCC----Cc-----cccchHHHHHHHHHHHHHH
Q 014329 219 VMVICIVFYNVAHRLPVIKYHEDLKI----QAVNEEK----E-EK-GSLT----GS-----MWRSAVWHIVGRVKWYGFG 279 (426)
Q Consensus 219 ~~~~~~~~~~~l~k~p~~~~~~~~~~----~~~~~~~----~-~~-~~~~----~~-----~~~~~~~~v~k~i~~~~l~ 279 (426)
++++|+++|..+.|+|++|+|.+++. ++.+|+. | ++ ++.+ ++ ....++++++|++|+++++
T Consensus 72 i~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~ 151 (309)
T PF01733_consen 72 IVILCIILYFILPRSPFYRYYLEREAKGDERETEEELSSDGEEESESRSEGTFENSKPQEENVFISFWVVLKKIWPYALS 151 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhccChHHHHHHhhhcccchhhhhhhhhhhccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 99999999999999999999876651 1111110 0 00 0000 00 0123578899999999999
Q ss_pred HHHHHhhhhccccceeeecccccC---CCchHH-HHHHHHHHhhhhhhhhhhhhhhcc--cchhHHHHHHHHHHHHhhhh
Q 014329 280 ILLIYIVTLSIFPGYITEDVHSEI---LKDWYG-IILIAGYNVFDLVGKSLTAIYLLE--NEKVAIGGCFARLLFFPLFL 353 (426)
Q Consensus 280 ~fl~f~vTl~vFP~i~~~~~~~~~---~~~w~~-~~~~~~FnvgD~iGR~~~~~~~~~--~~~~l~~~s~~R~~fiPlf~ 353 (426)
++++|++|+++||+++.. +++.. .++||. +++|++||+||++||.++.+.+++ ++|++++++++|++|||+|+
T Consensus 152 i~~~f~vTl~~FP~it~~-v~s~~~~~~~~~f~pv~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~ 230 (309)
T PF01733_consen 152 IFLVFFVTLSVFPGITSA-VQSSNNPDWSSYFVPVVLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFL 230 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhheeeeccceeee-eeccccCCCccHHHHHHHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHH
Confidence 999999999999999543 33321 233554 689999999999999999999887 78899999999999999999
Q ss_pred ccccCC------CccccchhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHHHHhh
Q 014329 354 GCLHGP------KFFRTEIPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVAWFWV 425 (426)
Q Consensus 354 ~c~~~p------~~~~~d~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s~~~~ 425 (426)
+||++| .+++||+++++++++||+||||++|++|+++|++++++|||.||++|+++++.|+++||++|+++.
T Consensus 231 ~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~~~ 308 (309)
T PF01733_consen 231 LCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFLLV 308 (309)
T ss_dssp ------------------------------------HHHH--------------------------------------
T ss_pred HHHhhcccccCCCcccchHHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999763 368999999999999999999999999999999999999999999999999999999999999885
No 4
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.94 E-value=2.4e-25 Score=224.64 Aligned_cols=357 Identities=16% Similarity=0.197 Sum_probs=255.2
Q ss_pred hhHHHHHHhhhhhHHHHHHhchh-Hhhcccc------------CC-----------Cc-cchhhHHHHHHHHHHHHHHHH
Q 014329 37 AYIIYFTLGLGFLLPWNAFITAV-DYFSYLY------------PE-----------AS-VDRIFAVAYMLVGLFCLVIIV 91 (426)
Q Consensus 37 ~y~~f~llGi~~L~pwN~~ita~-dyf~~~~------------~~-----------~~-~~~~~~~~~~~~~l~~~l~~~ 91 (426)
+|..|+++|..+.++|-.+++|. |--.++- |+ ++ .......+..+|.++..++..
T Consensus 1 ~~~~fw~~Gl~Nn~~yvv~lsaA~di~~~~~~~~~~~~~~~~~p~~~~~~~~~~~c~~~~t~~Vlladi~P~l~~Kl~aP 80 (402)
T PF02487_consen 1 NYVAFWLLGLCNNFLYVVMLSAAHDIVGEQKASPNSSHVDPDPPSTTLPSSSRRDCKSVSTGAVLLADILPSLLVKLIAP 80 (402)
T ss_pred ChhHHHHHHHhcchhHhhhHHhHHHHhhccccCCCCCCCCCCCCCCcCCCccCCCCCcccchHHHHHHHHHHHHHHHHhH
Confidence 37899999999999999999975 6666221 10 00 122366788899999999999
Q ss_pred HhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhccCCCHHHHHHH
Q 014329 92 FYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAGELPDRYMQAL 171 (426)
Q Consensus 92 ~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~~fp~~~~~a~ 171 (426)
++.||+|++.|+.....++++.++++.. .+ ..++.++.+++.|+++|+.|.+.+++++.+|++...+|
T Consensus 81 ~fi~~v~y~~Ri~~~~~l~~~g~l~va~-----~~-------~v~~~l~Gv~las~ssg~GE~tfL~lt~~y~~~~l~~w 148 (402)
T PF02487_consen 81 FFIHRVPYWIRILICVALSAAGMLLVAF-----SP-------SVWVRLLGVVLASLSSGLGEVTFLSLTHFYGKSSLSAW 148 (402)
T ss_pred hhhhhccchHHHHHHHHHHHHHHhheee-----cc-------chhHHHHHHHHHhhhhhhhHHHHHHHHHhcCccccccc
Confidence 9999999999999999998888876532 11 23678999999999999999999999999999999999
Q ss_pred HhccccccccchhHHHHHHHHHHHHhcccCccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhHH-HHhhhh-hhhhh
Q 014329 172 VAGTAGSALLSAGVLVSVLRILTKAVYTQDAIGLRKSANLYFAVGIVVMVICIVFYNVAHRLPVIKY-HEDLKI-QAVNE 249 (426)
Q Consensus 172 ~~G~g~a~~~~~Gv~~s~l~ii~~~~~~~~~~~~~~sa~~yF~i~~~~~~~~~~~~~~l~k~p~~~~-~~~~~~-~~~~~ 249 (426)
.+|+|.| |++.++.+...... .-+++. ++ ++..++..+-+++|+.+.+.|..++ +.+.+. ++.+|
T Consensus 149 ssGTG~a-----Gl~Ga~~y~~lT~~----g~s~~~-tl---l~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~~~~~ 215 (402)
T PF02487_consen 149 SSGTGGA-----GLVGALYYLGLTTL----GLSPRT-TL---LIMLVLPAIFLLSYFFLLPSPPTNRPYQESESEDEAED 215 (402)
T ss_pred cCCcChh-----hHHHHHHHHHHHHh----CcCHHH-HH---HHHHHHHHHHHHHHHHhhccccccCCCcccCCCCcccc
Confidence 9999999 99999999884432 122332 33 3334444445555665544432221 111100 00000
Q ss_pred hh-hhcc-----CCCCccccchHHHHHHHHHHHHHHHHHHHhhhhccccceeeecc--c-ccCCCchHHHHHHHHHHhhh
Q 014329 250 EK-EEKG-----SLTGSMWRSAVWHIVGRVKWYGFGILLIYIVTLSIFPGYITEDV--H-SEILKDWYGIILIAGYNVFD 320 (426)
Q Consensus 250 ~~-~~~~-----~~~~~~~~~~~~~v~k~i~~~~l~~fl~f~vTl~vFP~i~~~~~--~-~~~~~~w~~~~~~~~FnvgD 320 (426)
+. +++. +...+....+.++..|+..++++.++++|+..+.+-+|+.+... . .....++|+ ..-++||+|.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~-~Y~~~YQ~GV 294 (402)
T PF02487_consen 216 DLLESETSESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYR-WYQLLYQLGV 294 (402)
T ss_pred cccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHH-HHHHHHHHHH
Confidence 00 0000 00001112345667788777999999999999888888743211 1 111234443 3356999999
Q ss_pred hhhhhhhhhhhcccchhHHHHHHHHHHHHhhhhc-cccCCCccccchhHHHHHHHHhhhcchhhhheeeecCCCCChhhH
Q 014329 321 LVGKSLTAIYLLENEKVAIGGCFARLLFFPLFLG-CLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHA 399 (426)
Q Consensus 321 ~iGR~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~-c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~er 399 (426)
|++|+...+.+ .|++|++++++.+..-++++ ..+ +++++.|..+++++.-|+..|-....++....+++++|||
T Consensus 295 FISRSS~~~~r---ir~lwils~LQ~~nl~~~~l~s~~--~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~R 369 (402)
T PF02487_consen 295 FISRSSLPFFR---IRRLWILSLLQVINLVFLLLQSWY--RFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDR 369 (402)
T ss_pred hhhhcceeeee---hhhHHHHHHHHHHHHHHHHHHHHH--HHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHH
Confidence 99999976654 46899999999877665543 223 2678888888999999999998888888888888999999
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHh
Q 014329 400 ETAGIVIVLFLVLGLAAGSIVAWFW 424 (426)
Q Consensus 400 e~ag~~~~~~l~~Gl~~Gs~~s~~~ 424 (426)
|.+-+..+++-++|+.+++++++..
T Consensus 370 EFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 370 EFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999999999999999999999753
No 5
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=99.82 E-value=2.1e-20 Score=178.75 Aligned_cols=354 Identities=15% Similarity=0.168 Sum_probs=246.3
Q ss_pred hhHHHHHHhhhhhHHHHHHhchh-HhhccccCCC------c--------c-chhhHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014329 37 AYIIYFTLGLGFLLPWNAFITAV-DYFSYLYPEA------S--------V-DRIFAVAYMLVGLFCLVIIVFYAHKSDAW 100 (426)
Q Consensus 37 ~y~~f~llGi~~L~pwN~~ita~-dyf~~~~~~~------~--------~-~~~~~~~~~~~~l~~~l~~~~~~~~~s~~ 100 (426)
.+..|+++|+++...|-.+++|. |.-.++-++. + . ......+-++|+++..+...++.+|+++.
T Consensus 13 ~~~~FwllGLcNN~~YVvmLSAA~DIl~~~~~~~~~~c~~h~~~r~c~~~stg~VLLaDilPsL~iKl~~Pff~~rfpf~ 92 (409)
T KOG3880|consen 13 IAVAFWLLGLCNNYGYVVMLSAAEDILSEQVSDPGPTCIPHNSGRECQSVSTGAVLLADILPSLAIKLTAPFFIHRFPFG 92 (409)
T ss_pred cchHHHHHHHhcccceEeehhhhhhhhccccCCCCCCcccccccccccccccchhhhhhhhHHHHHHHhchhhhhhcccc
Confidence 88999999999999999999975 6665544321 0 1 23455788999999999999999999999
Q ss_pred eEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhccCCCHHHHHHHHhccccccc
Q 014329 101 VRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAGELPDRYMQALVAGTAGSAL 180 (426)
Q Consensus 101 ~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~~fp~~~~~a~~~G~g~a~~ 180 (426)
.|+.....+.+..+.++. +.+ .-...|..+.+.++++|+.|-+..++++.+|+.-...|++|+|.|
T Consensus 93 ~Ri~~~v~~sa~s~~lVa-----fs~-------s~~~sL~GV~~aSissGlGEiTFL~lss~Y~~~~i~~WSSGTGgA-- 158 (409)
T KOG3880|consen 93 FRIALVVLLSALSFFLVA-----FSN-------SVPMSLLGVVFASISSGLGEITFLALSSRYPSIVIAGWSSGTGGA-- 158 (409)
T ss_pred hHHHHHHHHHhcceEEEE-----ecc-------chhHHHhhhhhhhhcCCcceeehhhhhccCCCceeccccCCCCcc--
Confidence 999887777776665432 111 124578899999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHH-HHHhcccCccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHhhhhh-hhhhh-------h
Q 014329 181 LSAGVLVSVLRIL-TKAVYTQDAIGLRKSANLYFAVGIVVMVICIVFYNVAHRLPVIKYHEDLKIQ-AVNEE-------K 251 (426)
Q Consensus 181 ~~~Gv~~s~l~ii-~~~~~~~~~~~~~~sa~~yF~i~~~~~~~~~~~~~~l~k~p~~~~~~~~~~~-~~~~~-------~ 251 (426)
|++++..+.. +.++ +-++|. ++ ++...+-.+-.++|+++.|.|...+-.....+ +..++ .
T Consensus 159 ---GliGa~SYa~lT~~~----~~spk~-Tl---li~l~lP~lfa~~yf~lL~~pes~~~ptl~~~~~~~~~~~~~~~a~ 227 (409)
T KOG3880|consen 159 ---GLIGASSYAFLTSWA----NLSPKS-TL---LIMLFLPALFAFAYFFLLKSPESVYSPTLQPSTEIIPSQYLPFEAA 227 (409)
T ss_pred ---hhhhhhHHHHHhhhc----CCChhh-HH---HHHHHHHHHHHHHHHheeCCCccccCCCcCccceeccCCCCccccc
Confidence 9999998887 4432 123433 33 33444455566678887777655442111000 00000 0
Q ss_pred hhccCCCCccccchHHHHHHHHHHHHHHHHHHHhhhhccccceee-------ecc-cc-cCCCchHHHHHHHHHHhhhhh
Q 014329 252 EEKGSLTGSMWRSAVWHIVGRVKWYGFGILLIYIVTLSIFPGYIT-------EDV-HS-EILKDWYGIILIAGYNVFDLV 322 (426)
Q Consensus 252 ~~~~~~~~~~~~~~~~~v~k~i~~~~l~~fl~f~vTl~vFP~i~~-------~~~-~~-~~~~~w~~~~~~~~FnvgD~i 322 (426)
|+++..+.....++.++.+|...+|++.++++|+-.+.+--|+.. ... .+ +...+|+++ .|++|.|+
T Consensus 228 e~~sv~s~~~~~~e~~~~i~pll~~MvPL~~VY~~EY~INQGl~ell~F~c~~g~sls~~sqYRwyqv----lYQlGVFi 303 (409)
T KOG3880|consen 228 EEKSVPSRRLGLKETLKRIKPLLKYMVPLALVYFAEYFINQGLAELLLFPCSHGFSLSKDSQYRWYQV----LYQLGVFI 303 (409)
T ss_pred ccccCchhhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhEEeccccCCccchhhcchhhhe----eeeeeEEE
Confidence 111000001112334455555666999999999965544333311 111 11 122579876 89999999
Q ss_pred hhhhhhhhhcccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHH
Q 014329 323 GKSLTAIYLLENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETA 402 (426)
Q Consensus 323 GR~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~a 402 (426)
.|+.......+ .+|.+.+++++-.-.|++-.. -++.++.|..+++++.=|+-.|-.....+-.-.++.++|+||.|
T Consensus 304 SRSS~~~~~~p---~l~~LailQ~vNl~ff~~~a~-~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfa 379 (409)
T KOG3880|consen 304 SRSSINLFTMP---YLWLLAILQFVNLLFFLLQAW-YWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFA 379 (409)
T ss_pred EeccceEEech---HHHHHHHHHHHHHHHHHHHHH-HHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHh
Confidence 99998877665 778899989877665554221 12456667777777777888876666666666788999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 014329 403 GIVIVLFLVLGLAAGSIVAWF 423 (426)
Q Consensus 403 g~~~~~~l~~Gl~~Gs~~s~~ 423 (426)
....+.+-+.|+.+.+.+|+-
T Consensus 380 msavs~sDS~Gi~lA~~lalp 400 (409)
T KOG3880|consen 380 MSAVSISDSIGIFLAGLLALP 400 (409)
T ss_pred HhhheecchhhHHHHHHHhcc
Confidence 999999999999999998863
No 6
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.45 E-value=6.1e-05 Score=74.61 Aligned_cols=336 Identities=13% Similarity=0.034 Sum_probs=154.1
Q ss_pred HHHhchhHhhccccCCCcc-chhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCc
Q 014329 53 NAFITAVDYFSYLYPEASV-DRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGL 131 (426)
Q Consensus 53 N~~ita~dyf~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~ 131 (426)
+.+-.+.+++++.+.-++. .......+.+...+.....-.+.+|...|.-+..+.++..+..+..... +
T Consensus 11 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~-----~----- 80 (399)
T TIGR00893 11 ANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA-----G----- 80 (399)
T ss_pred HhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH-----c-----
Confidence 3344455666665543322 2344556677777777777777888886666666666555544433221 1
Q ss_pred chhhHHHHHHHHHhhhhhhhhhhhhhhhcc-CCCHHH----HHHHHhccccccccchhHHHHHHHHHHHHhcccCccccc
Q 014329 132 YDGFTVTVGAVALSGLADALVQGGLIGAAG-ELPDRY----MQALVAGTAGSALLSAGVLVSVLRILTKAVYTQDAIGLR 206 (426)
Q Consensus 132 ~~~f~~~l~~v~~~g~~~~~~q~s~~~la~-~fp~~~----~~a~~~G~g~a~~~~~Gv~~s~l~ii~~~~~~~~~~~~~ 206 (426)
.++..++..++.|++.+........+.+ .+|++. .+....+++++ +++...+.-..... .+.
T Consensus 81 --~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g-----~~~~~~~~~~l~~~-----~~~- 147 (399)
T TIGR00893 81 --AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLG-----GIIGGPLVGWILIH-----FSW- 147 (399)
T ss_pred --CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHH-----HHHHHHHHHHHHHh-----CCc-
Confidence 2344455667788888888877777766 466543 34445555566 55554433221111 111
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHhhhhhhh-hhh-hhh-ccCCCCccccchHHHHHH--HHHHHHHHHH
Q 014329 207 KSANLYFAVGIVVMVICIVFYNVAHRLPVIKYHEDLKIQAV-NEE-KEE-KGSLTGSMWRSAVWHIVG--RVKWYGFGIL 281 (426)
Q Consensus 207 ~sa~~yF~i~~~~~~~~~~~~~~l~k~p~~~~~~~~~~~~~-~~~-~~~-~~~~~~~~~~~~~~~v~k--~i~~~~l~~f 281 (426)
...|...+....+.++..+...++.|..+...+.+.++. .++ .++ +.+.+.++.+.+.++.+| +.|...+..+
T Consensus 148 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (399)
T TIGR00893 148 --QWAFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQF 225 (399)
T ss_pred --hHHHHHHHHHHHHHHHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHH
Confidence 123333333333333333333333332111000000000 000 000 001111112334445544 3444444433
Q ss_pred HHHhhhh---ccccceeeecccccCCCchHHHHHHHHHHhhhhhhhhhhhhhhc-ccchh--HH-HHHHHHHH---HHhh
Q 014329 282 LIYIVTL---SIFPGYITEDVHSEILKDWYGIILIAGYNVFDLVGKSLTAIYLL-ENEKV--AI-GGCFARLL---FFPL 351 (426)
Q Consensus 282 l~f~vTl---~vFP~i~~~~~~~~~~~~w~~~~~~~~FnvgD~iGR~~~~~~~~-~~~~~--l~-~~s~~R~~---fiPl 351 (426)
+...... ..+|.+..+ ....+....-.....+.++..+|+.+..+... ..+|+ +. .....-.. ....
T Consensus 226 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (399)
T TIGR00893 226 LVNIGLGFFLTWFPTYLVQ---ERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLL 302 (399)
T ss_pred HHHhHHHHHHHHHHHHHHH---HhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHH
Confidence 3333221 123332211 11111112223456677777888777654322 12221 11 11110011 1111
Q ss_pred hhccccCCCccccchhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 352 FLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 352 f~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
....+ ..++.+.......+.++..| .......+..+..++++|..+..+....-.+|-.+|..+.
T Consensus 303 ~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~ 367 (399)
T TIGR00893 303 MFATN----YVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVI 367 (399)
T ss_pred HHHhc----cchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHh
Confidence 11111 11222333444444555556 5666666777888888898888888887788877776543
No 7
>TIGR00895 2A0115 benzoate transport.
Probab=98.42 E-value=5.9e-05 Score=75.30 Aligned_cols=106 Identities=17% Similarity=-0.001 Sum_probs=65.3
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhc-ccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheee
Q 014329 310 IILIAGYNVFDLVGKSLTAIYLL-ENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMI 388 (426)
Q Consensus 310 ~~~~~~FnvgD~iGR~~~~~~~~-~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi 388 (426)
-.....++++..+|+.+..+... .++|.......+-.+...+... . .++.+...+..+++|+..|-.....+.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~ 361 (398)
T TIGR00895 288 ATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGS-T-----LFSPTLLLLLGAIAGFFVNGGQSGLYA 361 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHH-H-----hhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567788899999988755443 3333322222211111111111 1 223344566677888888777777777
Q ss_pred ecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 389 LAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 389 ~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
+..+..++++|..+-.++.....+|..+|..+.
T Consensus 362 ~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~ 394 (398)
T TIGR00895 362 LMALFYPTAIRATGVGWAIGIGRLGAIIGPILA 394 (398)
T ss_pred HHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 778888888888888777777778888777654
No 8
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.41 E-value=2.1e-05 Score=77.83 Aligned_cols=339 Identities=14% Similarity=0.123 Sum_probs=155.6
Q ss_pred HHHHHHhchhHhhccccCCCcc-chhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeeccc
Q 014329 50 LPWNAFITAVDYFSYLYPEASV-DRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGR 128 (426)
Q Consensus 50 ~pwN~~ita~dyf~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~ 128 (426)
..++.+-.+.+++++.+.-++. ...+...+.+...+..+..-.+.+|.+.|.-+..+..+..+..+..+.. +
T Consensus 9 ~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-----~-- 81 (379)
T TIGR00881 9 LVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS-----T-- 81 (379)
T ss_pred HhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh-----h--
Confidence 3455555666677766543322 2344556667777777777777888887766666666665555443321 1
Q ss_pred CCcchhhHHHHHHHHHhhhhhhhhhhhhhhhcc-CCCHHH----HHHHHhccccccccchhHHHH-HHHHHHHHhcccCc
Q 014329 129 VGLYDGFTVTVGAVALSGLADALVQGGLIGAAG-ELPDRY----MQALVAGTAGSALLSAGVLVS-VLRILTKAVYTQDA 202 (426)
Q Consensus 129 ~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~-~fp~~~----~~a~~~G~g~a~~~~~Gv~~s-~l~ii~~~~~~~~~ 202 (426)
.++..++..++.|++.+.......++.+ .+|++. .+-...++.++ +++.. ++...... .
T Consensus 82 -----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g-----~~~~~~~~~~~~~~-----~ 146 (379)
T TIGR00881 82 -----SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVG-----GGLLPPLVLFGIAE-----L 146 (379)
T ss_pred -----hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhH-----HHHHHHHHHHHHHh-----c
Confidence 2344555667778888887777776665 466543 23344555555 55555 22221111 1
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHhhhhhhhhhhhhhccC-C-CC-ccccchHHHHHH--HHHHHH
Q 014329 203 IGLRKSANLYFAVGIVVMVICIVFYNVAHRLPVIKYHEDLKIQAVNEEKEEKGS-L-TG-SMWRSAVWHIVG--RVKWYG 277 (426)
Q Consensus 203 ~~~~~sa~~yF~i~~~~~~~~~~~~~~l~k~p~~~~~~~~~~~~~~~~~~~~~~-~-~~-~~~~~~~~~v~k--~i~~~~ 277 (426)
.+-+ ..|...+.+..+.+++.+...++.|..+...+ ++++.+++.+++.+ . +. +..+...++++| ..|...
T Consensus 147 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (379)
T TIGR00881 147 YSWH---WVFIVPGIIAIIVSLICFLLLRDSPQSCGLPP-AEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYIS 222 (379)
T ss_pred CCch---hHHHHHHHHHHHHHHHHheeeCCCccccccCc-cccCcccccccccccccccccchHHHHHHHHhcchHHHHH
Confidence 1211 22333343333444444433333332111000 00000000000000 0 00 011122333443 344444
Q ss_pred HHHHHHHhhhh---ccccceeeecccccCCCchHHHHHHHHHHhhhhhhhhhhhhhhc--ccchhHHHHHHHH-HHHHhh
Q 014329 278 FGILLIYIVTL---SIFPGYITEDVHSEILKDWYGIILIAGYNVFDLVGKSLTAIYLL--ENEKVAIGGCFAR-LLFFPL 351 (426)
Q Consensus 278 l~~fl~f~vTl---~vFP~i~~~~~~~~~~~~w~~~~~~~~FnvgD~iGR~~~~~~~~--~~~~~l~~~s~~R-~~fiPl 351 (426)
+..++.+.... ...|.+..+ ....+.-..-.....++++..+|+.+..+... .++|+.......- ...+.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~ 299 (379)
T TIGR00881 223 LGYVFVYVVRTGILDWSPLYLTQ---EKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSL 299 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHH
Confidence 44444443222 123332211 11111222334567788999999988755432 1222221111111 111111
Q ss_pred hhccccCCCccccchhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHH
Q 014329 352 FLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIV 420 (426)
Q Consensus 352 f~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~ 420 (426)
...... + ..+.+...+..+++|+..+-..........+..++++|..+..+.+..-.+|..+|..+
T Consensus 300 ~~~~~~-~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 365 (379)
T TIGR00881 300 LVYWLN-P--AANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLP 365 (379)
T ss_pred HHHhcC-c--chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhh
Confidence 111111 1 11223334444555543322222222344566777888888888888777877777654
No 9
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.33 E-value=7.3e-05 Score=77.90 Aligned_cols=108 Identities=15% Similarity=0.118 Sum_probs=65.5
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhc---ccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhh
Q 014329 309 GIILIAGYNVFDLVGKSLTAIYLL---ENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSV 385 (426)
Q Consensus 309 ~~~~~~~FnvgD~iGR~~~~~~~~---~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~ 385 (426)
.-....++.+++.++|.+..+... .++++......+-+.....++++.. .++.+..++..+++|+.+|-....
T Consensus 278 ~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~----~~~~~~~~i~~~~~G~~~g~~~~~ 353 (455)
T TIGR00892 278 AAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCAL----AGDYTGLVIYCIFFGLSFGSVGAL 353 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHH----hchHHHHHHHHHHHHHHhchHHHH
Confidence 335566788999998877654432 1223222222222222222222221 223345567788999999888777
Q ss_pred eeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHH
Q 014329 386 LMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIV 420 (426)
Q Consensus 386 ~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~ 420 (426)
.+....+.++++++..+-.+......+|-.+|..+
T Consensus 354 ~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i 388 (455)
T TIGR00892 354 LFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPL 388 (455)
T ss_pred HHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccc
Confidence 66677777778888888777777777777777654
No 10
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.28 E-value=0.00016 Score=71.30 Aligned_cols=309 Identities=14% Similarity=0.031 Sum_probs=146.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhh
Q 014329 73 RIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALV 152 (426)
Q Consensus 73 ~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~ 152 (426)
......+.+...+.....-.+.+|+..|.-+..+.++..+..+..+.... .+ . ..++..++..++.|++.+..
T Consensus 37 g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~--~~----~-~~~~~~~~~~~l~g~~~~~~ 109 (365)
T TIGR00900 37 SLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVAL--LG----G-LNIWQVYVLAGILAIAQAFF 109 (365)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHH--cC----C-CcHHHHHHHHHHHHHHHHHH
Confidence 34555666677777666667777877554444444444444443333221 11 0 13445556677788998988
Q ss_pred hhhhhhhccC-CCHHH----HHHHHhccccccccchhHHHHHHHHHHHHhcccCccccchhHHHHHHHHHHHHHHHHHHH
Q 014329 153 QGGLIGAAGE-LPDRY----MQALVAGTAGSALLSAGVLVSVLRILTKAVYTQDAIGLRKSANLYFAVGIVVMVICIVFY 227 (426)
Q Consensus 153 q~s~~~la~~-fp~~~----~~a~~~G~g~a~~~~~Gv~~s~l~ii~~~~~~~~~~~~~~sa~~yF~i~~~~~~~~~~~~ 227 (426)
.....++.+. .|++. .+....+.+++ +++...+.-...... + + ...| .+..+..+++.+..
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~g~~l~~~l~~~~-----g--~-~~~~-~~~~~~~~~~~~~~ 175 (365)
T TIGR00900 110 TPAYQAMLPDLVPEEQLTQANSLSQAVRSLF-----YIVGPGIGGLMYATL-----G--I-KWAI-WVDAVGFAISALLI 175 (365)
T ss_pred HHHHHHHHHhcCCHHHHHHHHhHHHHHHHHH-----HHHHHHHHHHHHHHh-----h--H-HHHH-HHHHHHHHHHHHHH
Confidence 8888887764 66542 23344455555 555443322211111 1 1 1122 22222222232222
Q ss_pred HHhhcchhhHHHHhhhhhhhhhhhhhccCCCCccccchHHHHHH--HHHHHHHHHHHHHhhh---h-ccccceeeecccc
Q 014329 228 NVAHRLPVIKYHEDLKIQAVNEEKEEKGSLTGSMWRSAVWHIVG--RVKWYGFGILLIYIVT---L-SIFPGYITEDVHS 301 (426)
Q Consensus 228 ~~l~k~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~k--~i~~~~l~~fl~f~vT---l-~vFP~i~~~~~~~ 301 (426)
..+ |.|..+ +.++ ++.+++ . .++.++..+.++| ..|...+..++..+.. . ..+|-+..+ .
T Consensus 176 ~~~-~~~~~~-----~~~~--~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-- 241 (365)
T TIGR00900 176 VSV-RIPELA-----ASEI--QALSNA-V--LRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSK-Y-- 241 (365)
T ss_pred Hhc-ccccCC-----Cccc--cccchh-H--HHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH-H--
Confidence 222 211100 0000 000000 0 0001122233333 2333332222222221 1 344544221 1
Q ss_pred cCCCchHHHHHHHHHHhhhhhhhhhhhhhhc-ccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcc
Q 014329 302 EILKDWYGIILIAGYNVFDLVGKSLTAIYLL-ENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNG 380 (426)
Q Consensus 302 ~~~~~w~~~~~~~~FnvgD~iGR~~~~~~~~-~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnG 380 (426)
...+....-.....++++..+|+....+... .++++....... +..+.++..... +. +.+...+..+++|+..|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~---~~~~~~~~~~~~g~~~~ 316 (365)
T TIGR00900 242 LGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIF-VIGLAILVVGLT-PP---NFPLFLVLWFAIGVGYG 316 (365)
T ss_pred hCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHH-HHHHHHHHHHhh-ch---hHHHHHHHHHHHHHHHH
Confidence 1112222234566788899999888654332 233333322210 111111111111 11 23455677888899888
Q ss_pred hhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 381 YLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 381 yl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
-.......+..+.+++|+|..+..+......+|-.+|..++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~ 357 (365)
T TIGR00900 317 PINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILA 357 (365)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777777778888888898888888888888877776654
No 11
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.28 E-value=0.00025 Score=71.99 Aligned_cols=105 Identities=22% Similarity=0.098 Sum_probs=60.3
Q ss_pred HHHHHHHhhhhhhhhhhhhhhc-ccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeee
Q 014329 311 ILIAGYNVFDLVGKSLTAIYLL-ENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMIL 389 (426)
Q Consensus 311 ~~~~~FnvgD~iGR~~~~~~~~-~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ 389 (426)
.....++++..+|+.+..+... ..+|+.+.....-.. +-++.+ .. .++.+...+..+++|+..+-..+..+..
T Consensus 259 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~-~~~~~~-~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 332 (406)
T PRK11551 259 LVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGIL-ASLAAL-AA----APSFAGMLLAGFAAGLFVVGGQSVLYAL 332 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HHHHHH-Hh----cCcHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 4567888999999988765432 333443332211111 111111 11 1222344455566676655455556667
Q ss_pred cCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 390 APKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 390 ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
.++..++++|..+-.+....-.+|..+|..+.
T Consensus 333 ~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~ 364 (406)
T PRK11551 333 APLFYPTQVRGTGVGAAVAVGRLGSMAGPLLA 364 (406)
T ss_pred HHHHcchhhhhhhhhHHHHhhhHHHHHHhhhH
Confidence 77888888888887777777777777776653
No 12
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.20 E-value=0.00077 Score=68.72 Aligned_cols=104 Identities=7% Similarity=0.044 Sum_probs=57.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhh
Q 014329 74 IFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQ 153 (426)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q 153 (426)
.....+.+...+...+.-.+.+|+..|.-+..+.++..+..+..... . ....++..++.-.+.|++.+..+
T Consensus 75 ~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~~~~r~l~G~~~~~~~ 145 (481)
T TIGR00879 75 LVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLA-----A----FALSVEMLIVGRVLLGIGVGIAS 145 (481)
T ss_pred HHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHh-----c----cccchHHHHHHHHHHHhhhhHHH
Confidence 34455666666666666667777765544445555444443332211 1 11123455667778888888887
Q ss_pred hhhhhhcc-CCCHHH----HHHHHhccccccccchhHHHHHHH
Q 014329 154 GGLIGAAG-ELPDRY----MQALVAGTAGSALLSAGVLVSVLR 191 (426)
Q Consensus 154 ~s~~~la~-~fp~~~----~~a~~~G~g~a~~~~~Gv~~s~l~ 191 (426)
....++.+ .+|++. +..+..+.+++ +++..++.
T Consensus 146 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G-----~~~~~~~~ 183 (481)
T TIGR00879 146 ALVPMYLSEIAPKALRGALTSLYQLAITFG-----ILVAYGFG 183 (481)
T ss_pred hHHHHHHHccCChhhhhhhhhHHHHHHHHH-----HHHHHHHH
Confidence 77766655 566654 23334455555 55554444
No 13
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.18 E-value=0.00054 Score=67.71 Aligned_cols=333 Identities=11% Similarity=0.107 Sum_probs=150.1
Q ss_pred hhHHHHHHhhhhhHHHHHHhchhHhhccccCCCcc-chhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHH
Q 014329 37 AYIIYFTLGLGFLLPWNAFITAVDYFSYLYPEASV-DRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALL 115 (426)
Q Consensus 37 ~y~~f~llGi~~L~pwN~~ita~dyf~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i 115 (426)
.-..++...+.... .+.+-...++.++.+.-++. .......+.+...+.....-.+.+|+..|.-+..+.++..+..+
T Consensus 5 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~ 83 (377)
T TIGR00890 5 VLVGTVIMCFTSGY-VYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFT 83 (377)
T ss_pred EeHHHHHHHHHhhH-HhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHH
Confidence 33444444444433 22333334555655532222 23344456666666666666777777766656666666555544
Q ss_pred HHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhccC-CCHH---HHHHHHhccccccccchhHHHH-HH
Q 014329 116 VVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAGE-LPDR---YMQALVAGTAGSALLSAGVLVS-VL 190 (426)
Q Consensus 116 ~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~~-fp~~---~~~a~~~G~g~a~~~~~Gv~~s-~l 190 (426)
..... + .++..++.-.+.|++.+............ +|++ .......|.+++ +++.. +.
T Consensus 84 ~~~~~-----~-------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~~~~~~ 146 (377)
T TIGR00890 84 FYAIA-----D-------SLAALYLTYGLASAGVGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLG-----SFILSPLI 146 (377)
T ss_pred HHHHH-----H-------HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchh-----HhHHHHHH
Confidence 33221 1 23334445557777777665555555443 4543 345555566666 44322 21
Q ss_pred HHHHHHhcccCccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHhhhhhhhhhhhhhccCCCCccccchHHHHH
Q 014329 191 RILTKAVYTQDAIGLRKSANLYFAVGIVVMVICIVFYNVAHRLPVIKYHEDLKIQAVNEEKEEKGSLTGSMWRSAVWHIV 270 (426)
Q Consensus 191 ~ii~~~~~~~~~~~~~~sa~~yF~i~~~~~~~~~~~~~~l~k~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 270 (426)
..+ .+ ..+ + ...|...+....+.++..+..+++.|. + +.++ +++.+ +++.+.++++
T Consensus 147 ~~~----~~--~~~--~-~~~f~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~-~~~~~--------~~~~~~~~~~ 202 (377)
T TIGR00890 147 TSV----IN--LEG--V-PAAFIYMGIIFLLVIVLGAFLIGYPPG-Q-----LIKT-NIEVS--------VKDYTVWEML 202 (377)
T ss_pred HHH----Hh--ccc--H-HHHHHHHHHHHHHHHHHHHHheecCch-h-----cccc-Ccccc--------hhhhhHHHHH
Confidence 111 11 111 1 122333333333333333333322211 0 0000 00000 0112233444
Q ss_pred H--HHHHHHHHHHHHHhhh---hccccceeeecccccCCCchHHHHHHHHHHhhhhhhhhhhhhhh-cccchhHHHHH-H
Q 014329 271 G--RVKWYGFGILLIYIVT---LSIFPGYITEDVHSEILKDWYGIILIAGYNVFDLVGKSLTAIYL-LENEKVAIGGC-F 343 (426)
Q Consensus 271 k--~i~~~~l~~fl~f~vT---l~vFP~i~~~~~~~~~~~~w~~~~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~~s-~ 343 (426)
| +.|...+..++..+.. ...+|.+ . ++...++.........+++++.+||....+.. +.++|+.+... +
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~ 278 (377)
T TIGR00890 203 RTPQFWVLYLSFFLNAVSGLLLIGLYKPY-G---QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFG 278 (377)
T ss_pred cCccHHHHHHHHHHHhHHHHHHHHHHHHH-H---HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHH
Confidence 4 2333333333322221 1122222 1 11112233334566788999999998875543 23344432222 2
Q ss_pred HHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHH
Q 014329 344 ARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIV 420 (426)
Q Consensus 344 ~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~ 420 (426)
.-.+...+.. ..+. . +.+..+...++.|+..|-..+....+.++..++++|..+-.+......+|-.+|..+
T Consensus 279 ~~~~~~~~~~---~~~~-~-~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~ 350 (377)
T TIGR00890 279 ISAVGMAAML---FIPM-L-NDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLI 350 (377)
T ss_pred HHHHHHHHHH---Hccc-c-hhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHH
Confidence 1111111111 1111 1 123334445667777776655554555666677778777777777777777777654
No 14
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.14 E-value=0.00065 Score=70.14 Aligned_cols=100 Identities=8% Similarity=-0.030 Sum_probs=53.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhh
Q 014329 73 RIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALV 152 (426)
Q Consensus 73 ~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~ 152 (426)
..+...+.+...+.+...-.+.+|+..|.=+..+.++..+..+..+. .+ .++..++.-++.|++.+..
T Consensus 61 g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~-----~~-------~~~~l~~~~~l~g~~~g~~ 128 (434)
T PRK11663 61 GLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGF-----SS-------SLWAFALLWVLNAFFQGWG 128 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHH-----Hh-------HHHHHHHHHHHHHHHHHcc
Confidence 34555677777777777777788877654344444444444333222 11 2222333344566666666
Q ss_pred hhhhhhhcc-CCCHHH----HHHHHhccccccccchhHHHHH
Q 014329 153 QGGLIGAAG-ELPDRY----MQALVAGTAGSALLSAGVLVSV 189 (426)
Q Consensus 153 q~s~~~la~-~fp~~~----~~a~~~G~g~a~~~~~Gv~~s~ 189 (426)
.....++.+ .+|++. ++.+..+++++ +++...
T Consensus 129 ~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g-----~~~~~~ 165 (434)
T PRK11663 129 WPVCAKLLTAWYSRTERGGWWAIWNTAHNVG-----GALIPL 165 (434)
T ss_pred chHHHHHHHHhCCHHHHHHHHHHHHHHHHHH-----HHHHHH
Confidence 555555544 577654 33345555666 655543
No 15
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.13 E-value=0.00091 Score=68.36 Aligned_cols=303 Identities=13% Similarity=0.005 Sum_probs=139.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhh
Q 014329 73 RIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALV 152 (426)
Q Consensus 73 ~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~ 152 (426)
......+.++..+.+...-.+.+|++.|.-+..+.++..+.++.+...... . ...++..++..++.|++.+..
T Consensus 55 g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~l~~~~~~~g~~~~~~ 127 (417)
T PRK10489 55 GLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFL--P-----EPSLLAIYLLGLWDGFFGSLG 127 (417)
T ss_pred HHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHc--C-----CCcHHHHHHHHHHHHHHHHHH
Confidence 344556677777777777777888887776666666655544433221111 1 112344455666677777777
Q ss_pred hhhhhhhcc-CCCHHHHH----HHHhccccccccchhHHHHHHHHHHHHhcccCccccchhHHHHHHHHHHHHHHHHHHH
Q 014329 153 QGGLIGAAG-ELPDRYMQ----ALVAGTAGSALLSAGVLVSVLRILTKAVYTQDAIGLRKSANLYFAVGIVVMVICIVFY 227 (426)
Q Consensus 153 q~s~~~la~-~fp~~~~~----a~~~G~g~a~~~~~Gv~~s~l~ii~~~~~~~~~~~~~~sa~~yF~i~~~~~~~~~~~~ 227 (426)
.....+... ..|++..+ ....+.+++ .++...+.-...... +.+ ..| .+..+..+++.+..
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~g~~l~g~l~~~~-----~~~---~~~-~~~~~~~~~~~~~~ 193 (417)
T PRK10489 128 VTALLAATPALVGRENLMQAGAITMLTVRLG-----SVISPALGGLLIAAG-----GVA---WNY-GLAAAGTFITLLPL 193 (417)
T ss_pred HHHHhhhhhhccCHHHHHHHHHHHHHHHhHH-----HHhHHHHHHHHHHHH-----hhH---HHH-HHHHHHHHHHHHHH
Confidence 666666554 46665432 223444555 444443332211111 111 112 22233333333333
Q ss_pred HHhhcchhhHHHHhhhhhhhhhhhhhccCCCCccccchHHHHHHH--HHHHHHHHHHHHh--hhhccccceeeecccccC
Q 014329 228 NVAHRLPVIKYHEDLKIQAVNEEKEEKGSLTGSMWRSAVWHIVGR--VKWYGFGILLIYI--VTLSIFPGYITEDVHSEI 303 (426)
Q Consensus 228 ~~l~k~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~k~--i~~~~l~~fl~f~--vTl~vFP~i~~~~~~~~~ 303 (426)
..+++.+. +.+ ++ ++ .. ++.++..+.++|+ .+...+..++..+ .....+|.+..+..+
T Consensus 194 ~~l~~~~~-------~~~---~~-~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g--- 255 (417)
T PRK10489 194 LRLPALPP-------PPQ---PR-EH--PL--RSLLAGFRFLLASPVVGGIALLGGLLTMASAVRVLYPALADEVWQ--- 255 (417)
T ss_pred HhCCCCCC-------CCc---cc-cc--ch--HHHHHHHHHHHcChHHHHHHHHHHHHHHHHhHHHhhHHHHHhccC---
Confidence 32322110 000 00 00 00 0011122222221 1221111111111 111234443221111
Q ss_pred CCchHHHHHHHHHHhhhhhhhhhhhhhhc-ccchhH-HHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcch
Q 014329 304 LKDWYGIILIAGYNVFDLVGKSLTAIYLL-ENEKVA-IGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGY 381 (426)
Q Consensus 304 ~~~w~~~~~~~~FnvgD~iGR~~~~~~~~-~~~~~l-~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGy 381 (426)
.+.-..-.....+.++..+|+.+..+... .++++. ....+.-.+.+ +++ .. .++.+..++.++++|+..|.
T Consensus 256 ~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~--~~~-~~----~~~~~~~~~~~~~~g~~~~~ 328 (417)
T PRK10489 256 MGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAV--GLF-GL----MPMWILAVLCLALFGYLSAI 328 (417)
T ss_pred CChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHH--HHH-Hc----cchHHHHHHHHHHHHHHHHH
Confidence 11112223455777888888888665433 223332 22222211111 111 11 12223446677788887776
Q ss_pred hhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 382 LTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 382 l~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
.....+.+..+..++++|..+-.+.......|..+|..+.
T Consensus 329 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~ 368 (417)
T PRK10489 329 SSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALL 368 (417)
T ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHH
Confidence 6555555556667777888888887777777777776654
No 16
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.13 E-value=0.0036 Score=62.76 Aligned_cols=126 Identities=12% Similarity=0.116 Sum_probs=68.9
Q ss_pred hhHHHHHHhchhHhhccccCCCcc-chhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeec
Q 014329 48 FLLPWNAFITAVDYFSYLYPEASV-DRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIK 126 (426)
Q Consensus 48 ~L~pwN~~ita~dyf~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~ 126 (426)
.-+-+..+-...+.+++.+.-++- .......+.+...+.....-.+.+|+..|.-+..+.++..+..+.... .+
T Consensus 24 ~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~-----~~ 98 (405)
T TIGR00891 24 DAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGF-----AP 98 (405)
T ss_pred HHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH-----hc
Confidence 334445455555666665543222 233445566677777777777777776555444454444443333221 11
Q ss_pred ccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhcc-CCCHHH----HHHHHhccccccccchhHHHHHH
Q 014329 127 GRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAG-ELPDRY----MQALVAGTAGSALLSAGVLVSVL 190 (426)
Q Consensus 127 ~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~-~fp~~~----~~a~~~G~g~a~~~~~Gv~~s~l 190 (426)
.++..++.-++.|++.+.......++.. .+|++. .+....|.+++ .++...+
T Consensus 99 -------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g-----~~~~~~l 155 (405)
T TIGR00891 99 -------GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVG-----AVVAAQV 155 (405)
T ss_pred -------cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHH-----HHHHHHH
Confidence 2444556677788888877777666655 566553 33344555555 5554443
No 17
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.12 E-value=0.00024 Score=69.76 Aligned_cols=325 Identities=14% Similarity=0.121 Sum_probs=156.1
Q ss_pred HHHHHhchhH-hhccccCCCc-cchhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeeccc
Q 014329 51 PWNAFITAVD-YFSYLYPEAS-VDRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGR 128 (426)
Q Consensus 51 pwN~~ita~d-yf~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~ 128 (426)
.++.+....+ ++.+++.-++ .-......+.+...+.....-.+.+|.+.|.=+..+.++..+.... ... .+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~-~~~----~~-- 83 (352)
T PF07690_consen 11 GFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLL-LAF----AS-- 83 (352)
T ss_dssp HHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHH-HHH----HC--
T ss_pred HHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHH-hhh----hh--
Confidence 3444444445 6666654222 2344555677778888888778888877666455555555555222 111 11
Q ss_pred CCcchhhHHHHHHHHHhhhhhhhhhhhhhhhcc-CCCH-HH---HHHHHhccccccccchhHHHHHHHHHHHHhcccCcc
Q 014329 129 VGLYDGFTVTVGAVALSGLADALVQGGLIGAAG-ELPD-RY---MQALVAGTAGSALLSAGVLVSVLRILTKAVYTQDAI 203 (426)
Q Consensus 129 ~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~-~fp~-~~---~~a~~~G~g~a~~~~~Gv~~s~l~ii~~~~~~~~~~ 203 (426)
.++..++..++.|++.+.......++.+ .+|+ +. .+-...+.+++ .++...+. ....+ ..
T Consensus 84 -----~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g-----~~~g~~l~---~~l~~--~~ 148 (352)
T PF07690_consen 84 -----NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLG-----SILGPLLG---GFLIS--YF 148 (352)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHH-----HHHHHHHH---HHCCC--HC
T ss_pred -----hHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhh-----hhcccchh---hhhhh--cc
Confidence 1235667778899998888888888776 5776 23 33344444444 44333322 22211 11
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHH-HHhhcchhhHHHHhhhhhhhhhhhhhccCCCCccccch-HHHHHHH--HHHHHHH
Q 014329 204 GLRKSANLYFAVGIVVMVICIVFY-NVAHRLPVIKYHEDLKIQAVNEEKEEKGSLTGSMWRSA-VWHIVGR--VKWYGFG 279 (426)
Q Consensus 204 ~~~~sa~~yF~i~~~~~~~~~~~~-~~l~k~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~k~--i~~~~l~ 279 (426)
+.+ .. |.+..++.+++.+.. .++++.|..+.. + ++++++ +. .++...+ .+.+.|+ .|.....
T Consensus 149 ~~~---~~-~~~~~~~~~~~~il~~~~~~~~~~~~~~-----~---~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~ 214 (352)
T PF07690_consen 149 GWR---WA-FLISAILSLIAAILFILFLPEPPPPRER-----E---SPKESE-SK-KPKPLKPGFKSLFKNPVLWILLIA 214 (352)
T ss_dssp HHC---CH-HHHHHHHHHHHHHHHHCCC---STTTT----------SSTTTT----HHHCCCH-CTHHHHHHCCHHHHHH
T ss_pred ccc---cc-cccccchhhhhhhhHhhhhhhccccccc-----c---cccccc-cc-cccccccccccccccchhhhhhhh
Confidence 111 12 233333333333322 222222111100 0 000000 00 0001112 2223322 2322222
Q ss_pred HHH---HHhhhhccccceeeecccccCCCchHHHHHHHHHHhhhhhhhhhhhhhh-cccch-hHHHHHHHHHHHHhhhhc
Q 014329 280 ILL---IYIVTLSIFPGYITEDVHSEILKDWYGIILIAGYNVFDLVGKSLTAIYL-LENEK-VAIGGCFARLLFFPLFLG 354 (426)
Q Consensus 280 ~fl---~f~vTl~vFP~i~~~~~~~~~~~~w~~~~~~~~FnvgD~iGR~~~~~~~-~~~~~-~l~~~s~~R~~fiPlf~~ 354 (426)
.++ .+.......|.+..+..+. .+............++..+|+.+..+.. +.+++ ........-.+....+..
T Consensus 215 ~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (352)
T PF07690_consen 215 FFLFFFVFSGFSFFLPLYLQEVLGF--SGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLL 292 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHC--CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCC
T ss_pred hhHHHHHHHHhhcccchhhhhccCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHH
Confidence 222 2222333334331211111 1123344556777788877776654433 22322 333322222222211211
Q ss_pred cccCCCccccchhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHH
Q 014329 355 CLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAG 417 (426)
Q Consensus 355 c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~G 417 (426)
... ..+..+.+...+++|+..|........+..+..++|++..+..+....-.+|-.+|
T Consensus 293 ~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~ig 351 (352)
T PF07690_consen 293 LPF----SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIG 351 (352)
T ss_dssp SHH----HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHH----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHC
Confidence 111 13335556677889998998888888888888888889888888888888777665
No 18
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.05 E-value=0.00099 Score=69.15 Aligned_cols=115 Identities=12% Similarity=-0.005 Sum_probs=56.7
Q ss_pred HhchhHhhccccCCCcc-chhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcch
Q 014329 55 FITAVDYFSYLYPEASV-DRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYD 133 (426)
Q Consensus 55 ~ita~dyf~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~ 133 (426)
+-.+.+|..+. .-++. .......+.+...+.+...-.+.+|+..|.=+..+.++..+..+....... . . .
T Consensus 48 ~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~---~----~-~ 118 (452)
T PRK11273 48 FALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPW---A----T-S 118 (452)
T ss_pred HHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhc---c----c-c
Confidence 33455676653 21111 122334556666666666667778887665444555544444433322110 0 0 1
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhhhh-hccCCCHHHH----HHHHhccccc
Q 014329 134 GFTVTVGAVALSGLADALVQGGLIG-AAGELPDRYM----QALVAGTAGS 178 (426)
Q Consensus 134 ~f~~~l~~v~~~g~~~~~~q~s~~~-la~~fp~~~~----~a~~~G~g~a 178 (426)
.++..+++.++.|++.+........ ++..+|++.. +-+..|.+++
T Consensus 119 ~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 168 (452)
T PRK11273 119 SIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVG 168 (452)
T ss_pred cHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhh
Confidence 2333444556677777766554333 3345787643 2334555555
No 19
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.03 E-value=0.00049 Score=79.41 Aligned_cols=315 Identities=16% Similarity=0.038 Sum_probs=141.0
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhh
Q 014329 74 IFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQ 153 (426)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q 153 (426)
....++.++..+.....-.+..|+..|.-+..+..+.++..+...+... . ..++..++..++.|++.+...
T Consensus 51 ~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~--~-------~~~~~l~~~r~l~G~~~~~~~ 121 (1146)
T PRK08633 51 IVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYY--L-------GWFWLAFAVTFLLGAQSAIYS 121 (1146)
T ss_pred HHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHH--H-------ccHHHHHHHHHHHHHHHHhhc
Confidence 3345566666666666667778887665455555444433333222111 1 125556667778899999988
Q ss_pred hhhhhhccC-CCHH----HHHHHHhccccccccchhHHHHHHHHHHHHh-cccCccccchhHHHHHHHHHHHHHHHHHHH
Q 014329 154 GGLIGAAGE-LPDR----YMQALVAGTAGSALLSAGVLVSVLRILTKAV-YTQDAIGLRKSANLYFAVGIVVMVICIVFY 227 (426)
Q Consensus 154 ~s~~~la~~-fp~~----~~~a~~~G~g~a~~~~~Gv~~s~l~ii~~~~-~~~~~~~~~~sa~~yF~i~~~~~~~~~~~~ 227 (426)
.+..++.+. +|++ .++-.+.+.+++ .+++.++.-..... .++..++.......++.+.....++.++..
T Consensus 122 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig-----~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (1146)
T PRK08633 122 PAKYGIIPELVGKENLSRANGLLEAFTIVA-----ILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFA 196 (1146)
T ss_pred hHHHhhhHHhcCcccchhhhhHHHHHHHHH-----HHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHH
Confidence 888877774 5654 234444555555 45444433222111 000011111122222233333233333222
Q ss_pred HHhhcchhhHHHHhhhhhhhhhhhhhccCCCCccccchHHHHHH--HHHHHHHHHHHHHhh---hhccccceeeeccccc
Q 014329 228 NVAHRLPVIKYHEDLKIQAVNEEKEEKGSLTGSMWRSAVWHIVG--RVKWYGFGILLIYIV---TLSIFPGYITEDVHSE 302 (426)
Q Consensus 228 ~~l~k~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~k--~i~~~~l~~fl~f~v---Tl~vFP~i~~~~~~~~ 302 (426)
+.+++.|..+. ++++++......+....++.+++ ..|...+..++.++. ....+|.+.....+
T Consensus 197 ~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-- 264 (1146)
T PRK08633 197 YRLPKVPAAAP----------EVFDKKKYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLG-- 264 (1146)
T ss_pred hcCcCCCCCCc----------ccccccccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhC--
Confidence 22333221000 00000000000001122223332 233333333333222 22334444221111
Q ss_pred CCCch-HHHHHHHHHHhhhhhhhhhhhhhhcc-cchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcc
Q 014329 303 ILKDW-YGIILIAGYNVFDLVGKSLTAIYLLE-NEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNG 380 (426)
Q Consensus 303 ~~~~w-~~~~~~~~FnvgD~iGR~~~~~~~~~-~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnG 380 (426)
.+.. ..-++...+.+|-.+|..+..+.... .+++.+....+ +..+-++++.. ..+.+..++..+++|+..|
T Consensus 265 -~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~ 337 (1146)
T PRK08633 265 -LDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGAL-GLALSLFLLPT-----APSLASVLVLFFLFGFSAG 337 (1146)
T ss_pred -CCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHH-HHHHHHHHHHH-----hhhHHHHHHHHHHHHHHHH
Confidence 1122 23345667778888888776554332 22222221111 11111111111 1233455677788888888
Q ss_pred hhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 381 YLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 381 yl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
........+..+..++++|..+-.+.++...+|..+|..++
T Consensus 338 ~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~ 378 (1146)
T PRK08633 338 LFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALT 378 (1146)
T ss_pred HhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHH
Confidence 76665555556666677777766666655555554444433
No 20
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.02 E-value=0.0054 Score=67.90 Aligned_cols=105 Identities=15% Similarity=0.099 Sum_probs=60.6
Q ss_pred HHHHHHHhhhhhhhhhhhhhh-cccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeee
Q 014329 311 ILIAGYNVFDLVGKSLTAIYL-LENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMIL 389 (426)
Q Consensus 311 ~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ 389 (426)
+..++.+++.++|..+..+.. +..+|++++...+=.. +-.+++. +.++.....++.+++|+..+-..+....+
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsa-i~~ll~~-----~~~s~~~ll~~~~l~g~~~~~~~~~~~a~ 672 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSC-ISCFFLS-----FGNSESAMIALLCLFGGLSIAAWNALDVL 672 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH-HHHHHHH-----HHccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445677799999999887644 3455554433221111 1111111 11222333444445555444334445567
Q ss_pred cCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 390 APKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 390 ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
.++..+.++|..+..+....-.+|-.+|..+.
T Consensus 673 ~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~ 704 (742)
T TIGR01299 673 TVELYPSDKRATAFGFLNALCKAAAVLGILIF 704 (742)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78888889999888888877778887777664
No 21
>KOG4255 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.92 E-value=0.0014 Score=64.35 Aligned_cols=191 Identities=17% Similarity=0.177 Sum_probs=120.9
Q ss_pred hhhHHHHHHhhhhhHHHHHHhchhHhhccccCC-CccchhhHHHHHHHHHHHHHHHHHhhcCCCc---ceEehhHHHHH-
Q 014329 36 LAYIIYFTLGLGFLLPWNAFITAVDYFSYLYPE-ASVDRIFAVAYMLVGLFCLVIIVFYAHKSDA---WVRINVGLGLF- 110 (426)
Q Consensus 36 ~~y~~f~llGi~~L~pwN~~ita~dyf~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~s~---~~Ri~~~l~~~- 110 (426)
.....-.++|+|+-..-|...-..+-.-...|+ -+..++.++.-++.|+...++.+. .|..+. ..-|++.+...
T Consensus 11 ~t~llvalfG~gswa~vn~~wv~lp~lv~elpe~wslpsyl~vvVqla~lgpLi~tll-hk~~~~~i~~VPiif~ll~~a 89 (439)
T KOG4255|consen 11 LTHLLVALFGMGSWAGVNGLWVELPLLVKELPEGWSLPSYLSVVVQLANLGPLIVTLL-HKGAPGTIPTVPIIFVLLLLA 89 (439)
T ss_pred HHHHHHHHHccchHhhhcceeeehhHHHhhcCcccccchHHHHHHHHHcchhHHHHHH-HhhCCCcCCCCCchhHHHHHH
Confidence 444555677777766666655544444333443 345678888999999988777544 222221 12223222222
Q ss_pred HHHHHHHhhhhheeecccC--CcchhhHHHHHHHHHhhhhhhhhhhhhhhhccCCCHHHHHHHHhccccccccchhHHHH
Q 014329 111 VVALLVVPVMDAVYIKGRV--GLYDGFTVTVGAVALSGLADALVQGGLIGAAGELPDRYMQALVAGTAGSALLSAGVLVS 188 (426)
Q Consensus 111 ~v~~i~i~~~~~~~~~~~~--~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~~fp~~~~~a~~~G~g~a~~~~~Gv~~s 188 (426)
.++-+.+ +..|-++.. ++.-. +--+.+.+.+++.++.-...++-..+++||.|.+++..|+|++ |++++
T Consensus 90 ~v~~l~l---aflW~~ts~V~g~~hS-~afl~L~F~LAivdc~SnVtFLPFMs~lpp~fL~afFvG~GLS-----aLlPs 160 (439)
T KOG4255|consen 90 CVCQLGL---AFLWHDTSPVFGALHS-WAFLSLLFGLAIVDCTSNVTFLPFMSQLPPAFLNAFFVGMGLS-----ALLPS 160 (439)
T ss_pred HHHHHHH---HHHHhcchhhhcCcch-HHHHHHHHHHHHHHhhccchhhhhhhhCChHHHHHHHHhccHH-----HHHHH
Confidence 3333322 222332210 11001 2234456667888888899999999999999999999999999 99999
Q ss_pred HHHHHHHHh---cc-cC----ccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhh
Q 014329 189 VLRILTKAV---YT-QD----AIGLRKSANLYFAVGIVVMVICIVFYNVAHRLPVI 236 (426)
Q Consensus 189 ~l~ii~~~~---~~-~~----~~~~~~sa~~yF~i~~~~~~~~~~~~~~l~k~p~~ 236 (426)
++..+-... -+ +. +--.+.+..+||.+-..++..|+.+|+.+.|++--
T Consensus 161 llaLaQGtg~~~C~~n~t~~r~fP~rFs~s~FFl~l~~~~~~alaAF~vL~r~~~~ 216 (439)
T KOG4255|consen 161 LLALAQGTGRLECDLNGTPGRPFPPRFSVSTFFLALFAFTCAALAAFFVLYRLGAH 216 (439)
T ss_pred HHHHHccCCceeecCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 988773221 11 11 12247899999999999999999999998887543
No 22
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=97.87 E-value=0.0059 Score=62.25 Aligned_cols=104 Identities=21% Similarity=0.312 Sum_probs=56.8
Q ss_pred HHHHHHHhhhhhhhhhhhhhhcccchhHHHH-HHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeee
Q 014329 311 ILIAGYNVFDLVGKSLTAIYLLENEKVAIGG-CFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMIL 389 (426)
Q Consensus 311 ~~~~~FnvgD~iGR~~~~~~~~~~~~~l~~~-s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ 389 (426)
.....+.++..+|+.+..+...+..++.+.. ..+-.+. -+.+.... ++.+......+++|+..|.........
T Consensus 256 ~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~-~~~l~~~~-----~~~~~~~~~~~l~G~~~~~~~~~~~~~ 329 (394)
T PRK10213 256 LVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVS-ALVLTLWG-----SDKIVATGVAIIWGLTFALVPVGWSTW 329 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHH-HHHHHHHh-----hhHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 4567788999999988765544333333222 1111111 01111111 223445566778888887777655544
Q ss_pred cCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 390 APKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 390 ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
.-+..+ +++..++........+|..+|+.++
T Consensus 330 ~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~ 360 (394)
T PRK10213 330 ITRSLA-DQAEKAGSIQVAVIQLANTCGAAIG 360 (394)
T ss_pred HHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444 4455666655556677777777654
No 23
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=97.83 E-value=0.0055 Score=61.14 Aligned_cols=106 Identities=8% Similarity=0.011 Sum_probs=60.1
Q ss_pred HHHHHHhchhHhhccccCCCc-cchhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeeccc
Q 014329 50 LPWNAFITAVDYFSYLYPEAS-VDRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGR 128 (426)
Q Consensus 50 ~pwN~~ita~dyf~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~ 128 (426)
+..+.+....+++++.+..++ ........+.+...+...+.-.+.+|.+.|.-+..+.++..+..+.... .+
T Consensus 19 ~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~-----~~-- 91 (385)
T TIGR00710 19 LGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLAL-----SN-- 91 (385)
T ss_pred HHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHH-----Hc--
Confidence 445555556666666554332 2234445666666777776667777877554444454444444433221 11
Q ss_pred CCcchhhHHHHHHHHHhhhhhhhhhhhhhhhcc-CCCHHH
Q 014329 129 VGLYDGFTVTVGAVALSGLADALVQGGLIGAAG-ELPDRY 167 (426)
Q Consensus 129 ~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~-~fp~~~ 167 (426)
.++..++..++.|++.+.......++.. .+|++.
T Consensus 92 -----~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~ 126 (385)
T TIGR00710 92 -----NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEE 126 (385)
T ss_pred -----cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHH
Confidence 2233445566788888887777777776 466543
No 24
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=97.79 E-value=0.0024 Score=65.98 Aligned_cols=139 Identities=13% Similarity=0.035 Sum_probs=65.7
Q ss_pred hhhHHHHHHhhhhhHHHHHHhchhHhhccccCCCcc--chhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHH
Q 014329 36 LAYIIYFTLGLGFLLPWNAFITAVDYFSYLYPEASV--DRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVA 113 (426)
Q Consensus 36 ~~y~~f~llGi~~L~pwN~~ita~dyf~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~ 113 (426)
..++.+++.-...-.....+....+|.++ . +-+. .......+.+...+.....-.+.+|+..|.-+..+.++..+.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~-g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~ 104 (438)
T TIGR00712 27 QVFLGIFFGYAAYYLVRKNFALAMPYLVE-Q-GFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAV 104 (438)
T ss_pred HHHHHHHHHHHHHHHHhccHHhhhHHHHH-c-CCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHH
Confidence 33344333333333333434445566665 2 2221 223344556666666666666778887655444555555544
Q ss_pred HHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhh-ccCCCHHH----HHHHHhccccccccchhHHHH
Q 014329 114 LLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGA-AGELPDRY----MQALVAGTAGSALLSAGVLVS 188 (426)
Q Consensus 114 ~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~l-a~~fp~~~----~~a~~~G~g~a~~~~~Gv~~s 188 (426)
.+..... +. ....+....+..++.|++.+...+..... ...+|++. ++....+.+++ |.+..
T Consensus 105 ~~~~~~~-----~~---~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g-----~~~~~ 171 (438)
T TIGR00712 105 MLLMGFV-----PW---ATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIG-----GGIPP 171 (438)
T ss_pred HHHHhcc-----cc---ccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhH-----hHHHH
Confidence 4432221 10 00122333344455666666554433333 34577543 34445566666 65544
Q ss_pred H
Q 014329 189 V 189 (426)
Q Consensus 189 ~ 189 (426)
.
T Consensus 172 ~ 172 (438)
T TIGR00712 172 L 172 (438)
T ss_pred H
Confidence 3
No 25
>PRK03545 putative arabinose transporter; Provisional
Probab=97.78 E-value=0.012 Score=59.65 Aligned_cols=108 Identities=14% Similarity=0.098 Sum_probs=61.8
Q ss_pred hHhhccccCCCccc-hhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHH
Q 014329 59 VDYFSYLYPEASVD-RIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTV 137 (426)
Q Consensus 59 ~dyf~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~ 137 (426)
.+..++++.-++.+ ......+.+...+.+...-.+.+|++.|.-+..+.++..+..+.... .+ .++.
T Consensus 32 ~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-----~~-------~~~~ 99 (390)
T PRK03545 32 LSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSAL-----AW-------NFTV 99 (390)
T ss_pred hHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHH-----hc-------cHHH
Confidence 45556555443322 23334555555555555567788988876666666655554443221 11 2344
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhcc-CCCHH----HHHHHHhccccc
Q 014329 138 TVGAVALSGLADALVQGGLIGAAG-ELPDR----YMQALVAGTAGS 178 (426)
Q Consensus 138 ~l~~v~~~g~~~~~~q~s~~~la~-~fp~~----~~~a~~~G~g~a 178 (426)
.++.-++.|++.+.......++.+ .+|++ .++.+..|++++
T Consensus 100 l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g 145 (390)
T PRK03545 100 LLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALA 145 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHH
Confidence 455566778887777776666666 45653 344556666666
No 26
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=97.77 E-value=0.0048 Score=62.98 Aligned_cols=294 Identities=16% Similarity=0.147 Sum_probs=163.5
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhh
Q 014329 76 AVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGG 155 (426)
Q Consensus 76 ~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s 155 (426)
-..|-....+.......+..|++.|.-....+.++++.-++..+. ..|...++.=++.|++.|..-+.
T Consensus 54 is~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alA------------p~f~~Ll~aR~~~g~a~G~f~~i 121 (394)
T COG2814 54 ITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALA------------PSFAVLLLARALAGLAHGVFWSI 121 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHh------------ccHHHHHHHHHHHHHHHHHHHHH
Confidence 345666777777777778888887666666666666555443221 25677888888899999999988
Q ss_pred hhhhccC-CCHHH----HHHHHhccccccccchhHHHHHHHH-HHHHhcccCccccchhHHHHHHHHHHHHHHHHHHHHH
Q 014329 156 LIGAAGE-LPDRY----MQALVAGTAGSALLSAGVLVSVLRI-LTKAVYTQDAIGLRKSANLYFAVGIVVMVICIVFYNV 229 (426)
Q Consensus 156 ~~~la~~-fp~~~----~~a~~~G~g~a~~~~~Gv~~s~l~i-i~~~~~~~~~~~~~~sa~~yF~i~~~~~~~~~~~~~~ 229 (426)
..++++. -||+. +.-++.|..+| =++..-+-. +-... -+ ...|+.++.+-++..+..+..
T Consensus 122 ~~~~a~~lvpp~~~~~Aiaiv~~G~tlA-----~v~GvPLGt~ig~~~--------GW-R~~F~~ia~l~ll~~~~~~~~ 187 (394)
T COG2814 122 AAALAARLVPPGKRGRALALVFTGLTLA-----TVLGVPLGTFLGQLF--------GW-RATFLAIAVLALLALLLLWKL 187 (394)
T ss_pred HHHHHHHHcCccchhhHHHHHHHHHHHH-----HHHhccHHHHHHHHh--------hH-HHHHHHHHHHHHHHHHHHHHh
Confidence 8888884 56544 34455555555 333322111 11111 12 223444444433333333333
Q ss_pred hhcchhhHHHHhhhhhhhhhhhhhccCCCCccccchHHHHHH--HHHHHHHHHHHHHhhhhccccceeeecccccCCCch
Q 014329 230 AHRLPVIKYHEDLKIQAVNEEKEEKGSLTGSMWRSAVWHIVG--RVKWYGFGILLIYIVTLSIFPGYITEDVHSEILKDW 307 (426)
Q Consensus 230 l~k~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~k--~i~~~~l~~fl~f~vTl~vFP~i~~~~~~~~~~~~w 307 (426)
++ | ++. +++.++ ...+..+++| ++|...+..++.+.=.+..|.-+.+.-.+....+.-
T Consensus 188 lP--~--------~~~----~~~~~~------~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~ 247 (394)
T COG2814 188 LP--P--------SEI----SGSLPG------PLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVS 247 (394)
T ss_pred CC--C--------ccC----CCCCCc------chhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHh
Confidence 34 0 000 000000 1123445555 577777777777766666665542211111111233
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhcccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhhee
Q 014329 308 YGIILIAGYNVFDLVGKSLTAIYLLENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLM 387 (426)
Q Consensus 308 ~~~~~~~~FnvgD~iGR~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~m 387 (426)
...+..+.|-++-++|-.+..+...+++++.+....+ +..+.++.+... -++.+.....++++|++++-....--
T Consensus 248 ~vs~~Ll~~Gv~~~~Gn~~gGrl~dr~~~~~l~~~~~-l~a~~~l~l~~~----~~~~~~~~~~~~~wg~a~~~~~~~~~ 322 (394)
T COG2814 248 AVSLVLLAFGIAGFIGNLLGGRLADRGPRRALIAALL-LLALALLALTFT----GASPALALALLFLWGFAFSPALQGLQ 322 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHH-HHHHHHHHHHHh----cchHHHHHHHHHHHHHHhhhhhhHHH
Confidence 4556778999999999888766554455554333221 111111111111 12224455666667877754433332
Q ss_pred eecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 388 ILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 388 i~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
+.-.+ ..+|.+|.++.++.-+.++|+.+|++++
T Consensus 323 ~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lG 355 (394)
T COG2814 323 TRLAR-LAPDAADLAGSLNVAAFNLGIALGAALG 355 (394)
T ss_pred HHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222 5578999999999999999999999876
No 27
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=97.76 E-value=0.013 Score=59.17 Aligned_cols=103 Identities=14% Similarity=0.034 Sum_probs=58.9
Q ss_pred hhccccCCCc-cchhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHH
Q 014329 61 YFSYLYPEAS-VDRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTV 139 (426)
Q Consensus 61 yf~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l 139 (426)
|.++++..++ .......++.+...+.+...-.+.+|+..|.-+..+..+..+..+....... .+ .+....+...+
T Consensus 41 ~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~l~ 116 (399)
T PRK05122 41 YVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGL--LA--AWPVLSLLLLL 116 (399)
T ss_pred HHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhh--hh--ccchhHHHHHH
Confidence 4455454322 2234455677777777777778888988777777776665554433222111 11 11112344455
Q ss_pred HHHHHhhhhhhhhhhhhhhh-ccCCCHHH
Q 014329 140 GAVALSGLADALVQGGLIGA-AGELPDRY 167 (426)
Q Consensus 140 ~~v~~~g~~~~~~q~s~~~l-a~~fp~~~ 167 (426)
+.-++.|++.+......... ....|++.
T Consensus 117 ~~r~l~G~~~~~~~~~~~~~~~~~~~~~~ 145 (399)
T PRK05122 117 LGRLLLGIGESLAGTGSILWGIGRVGALH 145 (399)
T ss_pred HHHHHHHhhHHhhcchHHHHHHhhcChhh
Confidence 56678888888877776665 34566543
No 28
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=97.72 E-value=0.017 Score=58.39 Aligned_cols=55 Identities=16% Similarity=0.124 Sum_probs=35.9
Q ss_pred hhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 366 IPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 366 ~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
+..+....++|+..|-.....+.+..+..+ +++..++.+.+....+|-.+|+.++
T Consensus 300 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~ 354 (394)
T PRK11652 300 WTLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLS 354 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 445556677788777766666655554443 4566677777666677777777654
No 29
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=97.68 E-value=0.017 Score=56.10 Aligned_cols=298 Identities=17% Similarity=0.171 Sum_probs=153.7
Q ss_pred HHHHHHhchhHhhccccCCCc-cchhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeeccc
Q 014329 50 LPWNAFITAVDYFSYLYPEAS-VDRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGR 128 (426)
Q Consensus 50 ~pwN~~ita~dyf~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~ 128 (426)
+.++......+.+.+++..++ ........+.+...+.....-.+.+|.+.|.-+..+.++..+..+..... +
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~-----~-- 85 (352)
T cd06174 13 LDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFA-----S-- 85 (352)
T ss_pred HhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHh-----c--
Confidence 344444454454544443222 22344455666667777776777788776665556666555555443321 1
Q ss_pred CCcchhhHHHHHHHHHhhhhhhhhhhhhhhhccC-CCHHH----HHHHHhccccccccchhHHHHHHHHHHHHhcccCcc
Q 014329 129 VGLYDGFTVTVGAVALSGLADALVQGGLIGAAGE-LPDRY----MQALVAGTAGSALLSAGVLVSVLRILTKAVYTQDAI 203 (426)
Q Consensus 129 ~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~~-fp~~~----~~a~~~G~g~a~~~~~Gv~~s~l~ii~~~~~~~~~~ 203 (426)
.++...+...+.|++.+..+....++... +|+|. .+-...+.+++ +++...+.-..... .
T Consensus 86 -----~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~~~~~~~~~~~~-----~ 150 (352)
T cd06174 86 -----SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLG-----ALLGPLLGGLLAES-----L 150 (352)
T ss_pred -----cHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHH-----HHHHHHHHHHHHHH-----h
Confidence 23445556677888888888888777774 55432 23333444444 44443333222111 1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHhhhhhhhhhhhhhccCCCCccccchHHHHHHHHHHHHHHHHHH
Q 014329 204 GLRKSANLYFAVGIVVMVICIVFYNVAHRLPVIKYHEDLKIQAVNEEKEEKGSLTGSMWRSAVWHIVGRVKWYGFGILLI 283 (426)
Q Consensus 204 ~~~~sa~~yF~i~~~~~~~~~~~~~~l~k~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~k~i~~~~l~~fl~ 283 (426)
+ . ...|...+.. .+++.+....+. |+.|...+..++.
T Consensus 151 ~--~-~~~~~~~~~~-~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~ 187 (352)
T cd06174 151 G--W-RWLFLILAIL-GLLLALLLLFLL---------------------------------------RLLLLLALAFFLL 187 (352)
T ss_pred h--H-HHHHHHHHHH-HHHHHHHHHHHH---------------------------------------HHHHHHHHHHHHH
Confidence 1 1 1222222222 222222221111 2223332222222
Q ss_pred Hhh---hhccccceeeecccccCCCchHHHHHHHHHHhhhhhhhhhhhhhh-cccchh-HHHHHHHHHHHHhhhhccccC
Q 014329 284 YIV---TLSIFPGYITEDVHSEILKDWYGIILIAGYNVFDLVGKSLTAIYL-LENEKV-AIGGCFARLLFFPLFLGCLHG 358 (426)
Q Consensus 284 f~v---Tl~vFP~i~~~~~~~~~~~~w~~~~~~~~FnvgD~iGR~~~~~~~-~~~~~~-l~~~s~~R~~fiPlf~~c~~~ 358 (426)
... .....|.+..+.. +.++...-.....+.++..+|+....+.. +.++|+ ....... +..+..+....
T Consensus 188 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~-- 261 (352)
T cd06174 188 SFGYYGLLTYLPLYLQEVL---GLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLL-LAALGLLLLAL-- 261 (352)
T ss_pred HhHHHHHHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH-HHHHHHHHHHH--
Confidence 221 2222333211100 11233344567788899999988865432 223333 2222110 11111111111
Q ss_pred CCccccchhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 359 PKFFRTEIPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 359 p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
.++.+...+..+++|+..|...+....+..+..++|+|..+-.+.......|..+|..+.
T Consensus 262 ---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~ 321 (352)
T cd06174 262 ---APSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLA 321 (352)
T ss_pred ---hccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122355677788899999988888888888888889998888888888888888777665
No 30
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.68 E-value=0.0023 Score=64.92 Aligned_cols=129 Identities=14% Similarity=0.083 Sum_probs=88.5
Q ss_pred ccCCCCCCCCchhhhHHHHHHhhhhhHHHHHHhchhHhhccccCCCccchh-hHHHHHHHHHHHHHHHHHhhcCCCcceE
Q 014329 24 TVHQKPPPDTFHLAYIIYFTLGLGFLLPWNAFITAVDYFSYLYPEASVDRI-FAVAYMLVGLFCLVIIVFYAHKSDAWVR 102 (426)
Q Consensus 24 ~~~~~~p~d~~~~~y~~f~llGi~~L~pwN~~ita~dyf~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~~~~s~~~R 102 (426)
+..++.++-.+.+.+..|++.|+..-+ | -.-.+-+++.|+-+..+.. .-.++.....+..+-.-.+.+|+++|.-
T Consensus 5 ~~~~~~~~~~~v~~t~lFfl~G~~~~l--~--diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~g 80 (422)
T COG0738 5 ASSSKSVKLAFVLLTSLFFLWGFITCL--N--DILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAG 80 (422)
T ss_pred ccccCCceeHHHHHHHHHHHHHHHhhc--c--hhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHH
Confidence 344556777788999999999975433 1 1123455555554444433 3456666667777777788999999999
Q ss_pred ehhHHHHHHHHHHHH-hhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhccCCCHH
Q 014329 103 INVGLGLFVVALLVV-PVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAGELPDR 166 (426)
Q Consensus 103 i~~~l~~~~v~~i~i-~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~~fp~~ 166 (426)
+..|+.+.++...+. |.. ....|..-++...++|.+-+++|.+.=.+.+...++
T Consensus 81 i~lgL~l~avg~~lF~pAa----------~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~ 135 (422)
T COG0738 81 IVLGLLLYAVGAALFWPAA----------SSKSYGFFLVALFILASGIGLLETAANPYVTLLGKP 135 (422)
T ss_pred HHHHHHHHHHHHHHHhhhh----------hhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCc
Confidence 999999998865543 321 112444456677889999999999999988876544
No 31
>TIGR00898 2A0119 cation transport protein.
Probab=97.62 E-value=0.02 Score=59.97 Aligned_cols=103 Identities=11% Similarity=0.026 Sum_probs=52.5
Q ss_pred HHHHHhhhhhhhhhhhhhhc-ccchhHHHH-HHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeeec
Q 014329 313 IAGYNVFDLVGKSLTAIYLL-ENEKVAIGG-CFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMILA 390 (426)
Q Consensus 313 ~~~FnvgD~iGR~~~~~~~~-~~~~~l~~~-s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~a 390 (426)
.....+....|+.+..+... ..+|+.... .++-.+..-++... |. ...+..+...++.++..+-.......+.
T Consensus 361 ~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (505)
T TIGR00898 361 LFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFV---PV--DLYFLRTALAVLGKFGITSAFQMVYLYT 435 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHc---CC--CchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44566778888877654332 334443322 22222221111111 11 0112333344444444444445556677
Q ss_pred CCCCChhhHHHHhHHHHHHHHHHHHHHHHH
Q 014329 391 PKVVQLQHAETAGIVIVLFLVLGLAAGSIV 420 (426)
Q Consensus 391 p~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~ 420 (426)
++..+++.|..+-.+.+..-.+|-.+|..+
T Consensus 436 ~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i 465 (505)
T TIGR00898 436 AELYPTVVRNLGVGVCSTMARVGSIISPFL 465 (505)
T ss_pred cccccHHHHhhhHhHHHHHHHHHHHHHhHH
Confidence 888888888887666666666666665544
No 32
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=97.59 E-value=0.031 Score=57.88 Aligned_cols=94 Identities=7% Similarity=-0.065 Sum_probs=55.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhh
Q 014329 74 IFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQ 153 (426)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q 153 (426)
.....+.+...+.+++.-.+.+|+..|.=+..+.++..+..+..............+....+...++.=++.|++.|...
T Consensus 59 ~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~ 138 (479)
T PRK10077 59 FCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLAS 138 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHh
Confidence 44556777777777777778888776665666666655544432211100000001122223344556678899999888
Q ss_pred hhhhhhcc-CCCHHH
Q 014329 154 GGLIGAAG-ELPDRY 167 (426)
Q Consensus 154 ~s~~~la~-~fp~~~ 167 (426)
....++.+ .+|++.
T Consensus 139 ~~~~~~i~e~~~~~~ 153 (479)
T PRK10077 139 MLSPMYIAEIAPAHI 153 (479)
T ss_pred hHHHHHHHhhCChhh
Confidence 88888866 577664
No 33
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=97.56 E-value=0.03 Score=56.50 Aligned_cols=105 Identities=16% Similarity=0.113 Sum_probs=48.3
Q ss_pred HHHHHHHhhhhhhhhhhhhhh-cccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeee
Q 014329 311 ILIAGYNVFDLVGKSLTAIYL-LENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMIL 389 (426)
Q Consensus 311 ~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ 389 (426)
.....+.++..+++....+.. +.++|+......+ +....++... +.++.+...+..++.|+.+|-........
T Consensus 262 ~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 335 (408)
T PRK09874 262 MIASVPGVAALLSAPRLGKLGDRIGPEKILITALI--FSVLLLIPMS----FVQTPLQLGILRFLLGAADGALLPAVQTL 335 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHH--HHHHHHHHHH----HhccHHHHHHHHHHHHhhhHhhHHHHHHH
Confidence 344566777888776543322 2233443322221 1111111111 11233445566677888887655443333
Q ss_pred cCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 390 APKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 390 ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
..+..+++++...-.+......+|..+|..++
T Consensus 336 ~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~ 367 (408)
T PRK09874 336 LVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMG 367 (408)
T ss_pred HHHhCCcccceeeehHHHHHHHHHHHhhHHHH
Confidence 33344444444444444444455555555443
No 34
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=97.56 E-value=0.054 Score=56.76 Aligned_cols=56 Identities=11% Similarity=-0.082 Sum_probs=27.7
Q ss_pred hHhhccccCCCccc-hhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHH
Q 014329 59 VDYFSYLYPEASVD-RIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVAL 114 (426)
Q Consensus 59 ~dyf~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~ 114 (426)
.+++++.+.-++-+ ......+.+...+.+++.-.+.+|+..|..+..+.++..+..
T Consensus 59 ~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~ 115 (476)
T PLN00028 59 LPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAV 115 (476)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 45555555432221 223344555555555666666677765544444444444433
No 35
>PRK12382 putative transporter; Provisional
Probab=97.55 E-value=0.041 Score=55.55 Aligned_cols=102 Identities=16% Similarity=-0.009 Sum_probs=56.8
Q ss_pred HHHHHhhhhhhhhhhhhhh-cccchh-HHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeeec
Q 014329 313 IAGYNVFDLVGKSLTAIYL-LENEKV-AIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMILA 390 (426)
Q Consensus 313 ~~~FnvgD~iGR~~~~~~~-~~~~~~-l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~a 390 (426)
...+.++..+|+....+.. +.++|+ +.....+..+...++. .. ++.+...+..+++|+..|..........
T Consensus 255 ~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~l~g~~~~~~~~~~~~~~ 327 (392)
T PRK12382 255 LTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLW--LA-----PTAWVALAGAALTGAGCSLIFPALGVEV 327 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHH--Hc-----ccHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 4567788888887654432 233333 3332222222221111 11 1223445566778888776554444444
Q ss_pred CCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 391 PKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 391 p~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
.+..++++|..+-.+.......|..+|..++
T Consensus 328 ~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~ 358 (392)
T PRK12382 328 VKRVPSQVRGTALGGYAAFQDIAYGVSGPLA 358 (392)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566778888887777777777777776554
No 36
>PRK12307 putative sialic acid transporter; Provisional
Probab=97.54 E-value=0.044 Score=55.88 Aligned_cols=113 Identities=12% Similarity=0.030 Sum_probs=63.1
Q ss_pred hHhhccccCCCccc-hhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHH
Q 014329 59 VDYFSYLYPEASVD-RIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTV 137 (426)
Q Consensus 59 ~dyf~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~ 137 (426)
.+++++.+.-++.+ ......+.+...+.....-.+.+|+..|.-+..+.++..+..+..... + .++.
T Consensus 41 ~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~-----~-------~~~~ 108 (426)
T PRK12307 41 MYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLA-----S-------GVIM 108 (426)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH-----h-------HHHH
Confidence 34455445333222 334445667777777777777788776555556666655554433221 1 2334
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhcc-CCCHHH----HHHHHhccccccccchhHHHH
Q 014329 138 TVGAVALSGLADALVQGGLIGAAG-ELPDRY----MQALVAGTAGSALLSAGVLVS 188 (426)
Q Consensus 138 ~l~~v~~~g~~~~~~q~s~~~la~-~fp~~~----~~a~~~G~g~a~~~~~Gv~~s 188 (426)
.++.-++.|++.+.......++.. .+|++. .+....|.+++ +++..
T Consensus 109 l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg-----~~~~~ 159 (426)
T PRK12307 109 LTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIG-----NIIAA 159 (426)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHH-----HHHHH
Confidence 455566778777766655555443 567653 34455566666 65544
No 37
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.54 E-value=0.0098 Score=61.17 Aligned_cols=131 Identities=9% Similarity=0.022 Sum_probs=80.4
Q ss_pred hhhhHHHHHHhhhhhHHHHHHhchhHhhccccCCCccc-hhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHH
Q 014329 35 HLAYIIYFTLGLGFLLPWNAFITAVDYFSYLYPEASVD-RIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVA 113 (426)
Q Consensus 35 ~~~y~~f~llGi~~L~pwN~~ita~dyf~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~ 113 (426)
..+...|+..|... +..-...+.+++.+.-++.+ ......+.....+.....-.+.+|+..|.-+..++.+..+.
T Consensus 6 ~~~~~~f~~~G~~~----~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g 81 (410)
T TIGR00885 6 ALITSLFALWGFAN----DITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALG 81 (410)
T ss_pred HHHHHHHHHHHHHH----HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHH
Confidence 45667888888765 33333346666666543332 34445666777777777778889988888888888877766
Q ss_pred HHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhcc-CCCHHH----HHHHHhccccc
Q 014329 114 LLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAG-ELPDRY----MQALVAGTAGS 178 (426)
Q Consensus 114 ~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~-~fp~~~----~~a~~~G~g~a 178 (426)
.+...... ....|+..++..++.|++.|..|.+.-.+.. ..|++. ++-...+++++
T Consensus 82 ~~l~~~~~---------~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG 142 (410)
T TIGR00885 82 AFLFWPAA---------EIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFG 142 (410)
T ss_pred HHHHHHHH---------hhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHH
Confidence 55432111 0113455666778889999999987666554 345443 33333445555
No 38
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=97.54 E-value=0.023 Score=56.41 Aligned_cols=106 Identities=14% Similarity=0.104 Sum_probs=56.7
Q ss_pred HHHHHhchhH-hhccccCCCc-cchhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeeccc
Q 014329 51 PWNAFITAVD-YFSYLYPEAS-VDRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGR 128 (426)
Q Consensus 51 pwN~~ita~d-yf~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~ 128 (426)
-|..+-...+ |+++.+.-++ ....+...+.+...+.....-.+.+|+..|..+..+.++..+..+..... +
T Consensus 16 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~-----~-- 88 (366)
T TIGR00886 16 VWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLA-----V-- 88 (366)
T ss_pred HHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH-----h--
Confidence 3444444444 4655554332 23445556777777777777777888776666666666665555443221 1
Q ss_pred CCcchhhHHHHHHHHHhhhhhhhhhhhhhhhccCCCHHH
Q 014329 129 VGLYDGFTVTVGAVALSGLADALVQGGLIGAAGELPDRY 167 (426)
Q Consensus 129 ~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~~fp~~~ 167 (426)
. .++..++..++.|++.+......--++..+|++.
T Consensus 89 --~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 123 (366)
T TIGR00886 89 --Q--SYSVLLLLRLFIGIAGGSFASCMPWISFFFPKKI 123 (366)
T ss_pred --h--hHHHHHHHHHHHHHhchhhHhHHHHHHHhcCHhh
Confidence 0 2333444555566665554433333334577653
No 39
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=97.50 E-value=0.0042 Score=64.77 Aligned_cols=121 Identities=12% Similarity=0.010 Sum_probs=67.1
Q ss_pred hhHhhccccCCCcc-chhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhH
Q 014329 58 AVDYFSYLYPEASV-DRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFT 136 (426)
Q Consensus 58 a~dyf~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~ 136 (426)
+.+..++.+.-++- ......++.+...+.+...-.+.+|++.|.-+..+.++..+..+.+..+... . ...++
T Consensus 51 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~-~------~~~~~ 123 (467)
T PRK09556 51 AQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGS-G------SVSLG 123 (467)
T ss_pred hhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhc-c------cchHH
Confidence 34555555543222 2344556777777777777778888887766666666655554444332111 1 11344
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhcc-CCCHHH----HHHHHhccccccccchhHHHHHH
Q 014329 137 VTVGAVALSGLADALVQGGLIGAAG-ELPDRY----MQALVAGTAGSALLSAGVLVSVL 190 (426)
Q Consensus 137 ~~l~~v~~~g~~~~~~q~s~~~la~-~fp~~~----~~a~~~G~g~a~~~~~Gv~~s~l 190 (426)
..++.-++.|++.+..-.....+.+ .+|++. ++.+..|.+++ +++..++
T Consensus 124 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG-----~~l~~~i 177 (467)
T PRK09556 124 LMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLG-----GAGAGGV 177 (467)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchh-----hhHHHHH
Confidence 4455556677777766555556555 577642 33444555555 5555443
No 40
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=97.49 E-value=0.022 Score=59.03 Aligned_cols=108 Identities=10% Similarity=0.096 Sum_probs=62.4
Q ss_pred HHHHHHHhhhhhhhhhhhhhh-cccchhHHHHHHHHHHHHhhhhcc-ccCCCccccchhHHHHHHHHhhhcchhhhheee
Q 014329 311 ILIAGYNVFDLVGKSLTAIYL-LENEKVAIGGCFARLLFFPLFLGC-LHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMI 388 (426)
Q Consensus 311 ~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~~s~~R~~fiPlf~~c-~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi 388 (426)
.......++..+|+.+..+.. +.++|+......+ +..+-.+++. ..+|. .+.+.....+++.|+..|......+.
T Consensus 295 ~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~g~~~~~~~~~~ 371 (485)
T TIGR00711 295 LHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLI-LYAVGFYWRAFTFTPD--TPFLAIALPQFIRGFGMGCFFMPLTT 371 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHH-HHHHHHHHHhccCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445567788888887765543 2344443322221 1111111111 11111 12233455577888888877665556
Q ss_pred ecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 389 LAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 389 ~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
.+.+.++++++..+..+.++.-.+|-.+|..+.
T Consensus 372 ~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~ 404 (485)
T TIGR00711 372 IALSGLPPHKIARGSSLSNFTRQLGGSIGTALI 404 (485)
T ss_pred HHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 666777888888888888888888888876653
No 41
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=97.49 E-value=0.009 Score=59.29 Aligned_cols=103 Identities=13% Similarity=0.059 Sum_probs=52.4
Q ss_pred HHHHHHHhhhhhhhhhhhhhh-cccchhHHH-HHHHHHHH-HhhhhccccCCCccccchhHHHHHHHHhhhcchhhhhee
Q 014329 311 ILIAGYNVFDLVGKSLTAIYL-LENEKVAIG-GCFARLLF-FPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLM 387 (426)
Q Consensus 311 ~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~-~s~~R~~f-iPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~m 387 (426)
.....+.++..+++.+..+.. +.++|+.+. ...+-.+. ++++.....+ .+.+..+...++.|+..|-..+..+
T Consensus 259 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~ 334 (394)
T TIGR00883 259 LVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDS----GSFTLFFFLVLGLALIGGMYTGPMG 334 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcC----CchHHHHHHHHHHHHHHHHHhhhHH
Confidence 345667788888887654432 233344322 22222211 1222211111 1223445566777888877777777
Q ss_pred eecCCCCChhhHHHHhHH-HHHHHHHHHHHH
Q 014329 388 ILAPKVVQLQHAETAGIV-IVLFLVLGLAAG 417 (426)
Q Consensus 388 i~ap~~v~~~ere~ag~~-~~~~l~~Gl~~G 417 (426)
...++..++++|..+-.+ ..+....|-.+|
T Consensus 335 ~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~ 365 (394)
T TIGR00883 335 SFLPELFPTEVRYTGASLAYNLAGAIFGGFA 365 (394)
T ss_pred HHHHHhCCccceeeEeeehhHhHHHHHhhHH
Confidence 777777777777655443 334334444333
No 42
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=97.47 E-value=0.021 Score=58.04 Aligned_cols=121 Identities=9% Similarity=0.065 Sum_probs=61.9
Q ss_pred hhhhHHHHHHhhhhhHHHHHHhchhHhhccccCCCcc-chhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHH
Q 014329 35 HLAYIIYFTLGLGFLLPWNAFITAVDYFSYLYPEASV-DRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVA 113 (426)
Q Consensus 35 ~~~y~~f~llGi~~L~pwN~~ita~dyf~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~ 113 (426)
.+.-+.+.+....+......+....+.+.+++.-++- .......+.+...+.....-.+.+|+..|.-+..+..+..+.
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~ 91 (406)
T PRK15402 12 LLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILT 91 (406)
T ss_pred HHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 3444444444444444555555555556555543322 223334566666666666666777877655444555444444
Q ss_pred HHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhcc-CCCHHH
Q 014329 114 LLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAG-ELPDRY 167 (426)
Q Consensus 114 ~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~-~fp~~~ 167 (426)
.+.... .+ .++..++.-.+.|++.+.......+... .+|++.
T Consensus 92 ~~~~~~-----~~-------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~ 134 (406)
T PRK15402 92 CLAILL-----AQ-------SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD 134 (406)
T ss_pred HHHHHH-----Hc-------cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH
Confidence 333221 11 1233344556667777666555555444 466643
No 43
>PRK10133 L-fucose transporter; Provisional
Probab=97.46 E-value=0.031 Score=58.06 Aligned_cols=135 Identities=10% Similarity=0.027 Sum_probs=78.6
Q ss_pred hHHHHHHhhhhhHHHHHHhchhHhhccccCCCccc-hhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHH
Q 014329 38 YIIYFTLGLGFLLPWNAFITAVDYFSYLYPEASVD-RIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLV 116 (426)
Q Consensus 38 y~~f~llGi~~L~pwN~~ita~dyf~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~ 116 (426)
.+.|++.|+.. +..-...+.+++.+.-++-+ ......+.+...+.+...-.+.+|+..|.=+..++++..+..+.
T Consensus 32 ~~~~~~~~~~~----~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l 107 (438)
T PRK10133 32 CSLFFLWAVAN----NLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAAL 107 (438)
T ss_pred HHHHHHHHHHH----HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 34555555544 22222234556666544332 33445666777777777777788887776677777776665543
Q ss_pred HhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhccCCCHHHHH-----HHHhccccccccchhHHHHHH
Q 014329 117 VPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAGELPDRYMQ-----ALVAGTAGSALLSAGVLVSVL 190 (426)
Q Consensus 117 i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~~fp~~~~~-----a~~~G~g~a~~~~~Gv~~s~l 190 (426)
...... . ..|...++.-++.|++.+..+.+...+....+++..+ ..+.+.+++ +.+..++
T Consensus 108 ~~~~~~--a-------~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G-----~~~g~~~ 172 (438)
T PRK10133 108 FWPAAE--I-------MNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFG-----AIIAVVF 172 (438)
T ss_pred HHHHHh--c-------CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHH-----HHHHHHH
Confidence 211111 1 1345566777888999999988888876666544333 345555555 5555444
No 44
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=97.44 E-value=0.027 Score=60.06 Aligned_cols=324 Identities=15% Similarity=0.081 Sum_probs=158.9
Q ss_pred HHHHhhhhhHHHHHHhchhHhhccccCCCcc-chhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhh
Q 014329 41 YFTLGLGFLLPWNAFITAVDYFSYLYPEASV-DRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPV 119 (426)
Q Consensus 41 f~llGi~~L~pwN~~ita~dyf~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~ 119 (426)
++.--.-+.+.......+...+.....++.. -.....+..+|.++..+..-.+..|.+.|.=+..+-++..+..+++++
T Consensus 15 lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~ 94 (524)
T PF05977_consen 15 LWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAV 94 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHH
Confidence 3333333444444444455555444433332 233445667777777777777888988777777777666655555554
Q ss_pred hhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhcc-CCCHHHH-HHHH-----------hccccccccchhHH
Q 014329 120 MDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAG-ELPDRYM-QALV-----------AGTAGSALLSAGVL 186 (426)
Q Consensus 120 ~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~-~fp~~~~-~a~~-----------~G~g~a~~~~~Gv~ 186 (426)
+.. .+ ....+..++..++.|+++++.+.+..++.. +.|++.. +|.. .|-+++ |++
T Consensus 95 l~~--~~-----~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalg-----G~L 162 (524)
T PF05977_consen 95 LAF--FG-----LLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALG-----GIL 162 (524)
T ss_pred HHH--hC-----cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHH-----HHH
Confidence 432 11 234466777888999999999999888886 5776543 2221 222222 443
Q ss_pred HHHHHHHHHHhcccCccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHhhhhhhhhhhhhhccCCCCccccchH
Q 014329 187 VSVLRILTKAVYTQDAIGLRKSANLYFAVGIVVMVICIVFYNVAHRLPVIKYHEDLKIQAVNEEKEEKGSLTGSMWRSAV 266 (426)
Q Consensus 187 ~s~l~ii~~~~~~~~~~~~~~sa~~yF~i~~~~~~~~~~~~~~l~k~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (426)
.+..... .. |.+.++..++.+......++.+ .+++ .++++ ...++
T Consensus 163 va~~G~~----------------~~-f~inalsfl~~i~~l~~~~~~~-------~~~~-----~~~e~------~~~~l 207 (524)
T PF05977_consen 163 VAFFGAA----------------AA-FLINALSFLISILALLRWKPPP-------PPSS-----LPRER------FFSAL 207 (524)
T ss_pred HHHHHHH----------------HH-HHHHHHHHHHHHHHHHHccccc-------cccc-----cchhh------hhhhH
Confidence 3322211 11 1222221122222111111110 0000 00000 01111
Q ss_pred HHHHH------HHHHHHHHHHHHHh---hhhccccceeeecccccCCCchHHHHHHHHHHhhhhhhhhhhhhhhc-ccch
Q 014329 267 WHIVG------RVKWYGFGILLIYI---VTLSIFPGYITEDVHSEILKDWYGIILIAGYNVFDLVGKSLTAIYLL-ENEK 336 (426)
Q Consensus 267 ~~v~k------~i~~~~l~~fl~f~---vTl~vFP~i~~~~~~~~~~~~w~~~~~~~~FnvgD~iGR~~~~~~~~-~~~~ 336 (426)
++-+| .++...+..++.++ --..+.|-+..+..+ .....+- ++..++.+|-.+|-.+..+... .+.+
T Consensus 208 ~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~--~~a~~yG-ll~a~~gvGai~Gal~~~~l~~~~~~~ 284 (524)
T PF05977_consen 208 REGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLG--GGASGYG-LLLAAFGVGAILGALLLPRLRRRLSSR 284 (524)
T ss_pred HHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhC--CcHHHHH-HHHHHHHHHHHHHHHHHHHhhcccCcc
Confidence 11111 11111111111111 112334544221111 1122333 4567999999999888654433 3333
Q ss_pred hHHHHHHHHHHHH-hhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHH
Q 014329 337 VAIGGCFARLLFF-PLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLA 415 (426)
Q Consensus 337 ~l~~~s~~R~~fi-Plf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~ 415 (426)
++...+. +++- .++.+. +.++.+..++.+++.|+......+......-+.++++.|..+-.+.......|..
T Consensus 285 ~lv~~~~--~~~a~~~~~la-----l~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~ 357 (524)
T PF05977_consen 285 RLVLLAS--LLFALALLLLA-----LSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMP 357 (524)
T ss_pred hhhHHHH--HHHHHHHHHHh-----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHH
Confidence 4332222 1111 111111 2334456677778888888777666655666677788888877777777777777
Q ss_pred HHHHHH
Q 014329 416 AGSIVA 421 (426)
Q Consensus 416 ~Gs~~s 421 (426)
+|+++.
T Consensus 358 lGsll~ 363 (524)
T PF05977_consen 358 LGSLLW 363 (524)
T ss_pred HHHHHH
Confidence 777653
No 45
>PRK03699 putative transporter; Provisional
Probab=97.37 E-value=0.041 Score=55.81 Aligned_cols=79 Identities=8% Similarity=-0.012 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhh
Q 014329 77 VAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGL 156 (426)
Q Consensus 77 ~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~ 156 (426)
..+.+...+.....-.+.+|++.|.-+..+.++..+..+.... .+ .++..++.-.+.|++.+...+..
T Consensus 49 s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~-----~~-------~~~~~~~~~~l~G~~~g~~~~~~ 116 (394)
T PRK03699 49 TFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMF-----SH-------SLALFSIAMFVLGVVSGITMSIG 116 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH-----cc-------hHHHHHHHHHHHHHhhHhhccch
Confidence 3455566666666667777777665555555544444333221 11 22334455566777777666544
Q ss_pred hhhc-cCCCHHH
Q 014329 157 IGAA-GELPDRY 167 (426)
Q Consensus 157 ~~la-~~fp~~~ 167 (426)
.++. ..+|++.
T Consensus 117 ~~~i~~~~~~~~ 128 (394)
T PRK03699 117 TFLITHVYEGKQ 128 (394)
T ss_pred hHHhhhhcccch
Confidence 4443 3566543
No 46
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.28 E-value=0.013 Score=62.16 Aligned_cols=101 Identities=21% Similarity=0.285 Sum_probs=63.5
Q ss_pred HHHHHHHhhhhhhhhhhhhhhcc---cchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhhee
Q 014329 311 ILIAGYNVFDLVGKSLTAIYLLE---NEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLM 387 (426)
Q Consensus 311 ~~~~~FnvgD~iGR~~~~~~~~~---~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~m 387 (426)
.+..+-++.|.+||....+..-. +.+.+...+++....-.+++. +.++-+..+...+++|++-|+..++.-
T Consensus 337 ~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p------~~~~~~~l~~~~~~fG~~~g~~~~l~~ 410 (509)
T KOG2504|consen 337 FLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLP------FATTYVGLIVFSILFGFCVGSFSSLTP 410 (509)
T ss_pred HHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHH------HhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678899999999998775542 233344555544444333322 122335678888999999999999887
Q ss_pred eecCCCCChhhHHHHhHHHHHHHHHHHHHH
Q 014329 388 ILAPKVVQLQHAETAGIVIVLFLVLGLAAG 417 (426)
Q Consensus 388 i~ap~~v~~~ere~ag~~~~~~l~~Gl~~G 417 (426)
....+.+..|+-.-|-.+..++-.++..+|
T Consensus 411 ~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~g 440 (509)
T KOG2504|consen 411 VILVDLVGLEKLSNAYGLLLLFQGIGALVG 440 (509)
T ss_pred HHHHHHcChhhcchHHHHHHHHhHHHHHcC
Confidence 666666665555555555555555554444
No 47
>PRK10504 putative transporter; Provisional
Probab=97.26 E-value=0.076 Score=55.04 Aligned_cols=52 Identities=19% Similarity=0.268 Sum_probs=37.8
Q ss_pred HHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 370 LLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 370 il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
+..++.|+..|-..+......++.+++|++..+..+.++...+|..+|..+.
T Consensus 358 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~ 409 (471)
T PRK10504 358 FVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIA 409 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 4455667777766666666666777888888888888888888887776654
No 48
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=97.25 E-value=0.15 Score=53.69 Aligned_cols=90 Identities=7% Similarity=-0.147 Sum_probs=53.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhh
Q 014329 73 RIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALV 152 (426)
Q Consensus 73 ~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~ 152 (426)
..+...+.+...+..++.-.+.+|+..|.-+..+.++..+..++.... .++ .....+...++.-++.|++.+..
T Consensus 59 ~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~----~~~--~~~~~~~~~~~~r~l~G~~~g~~ 132 (502)
T TIGR00887 59 AAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLS----PGS--SPKSVMATLCFWRFWLGVGIGGD 132 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc----cCc--ccchHHHHHHHHHHHHHHHHhhh
Confidence 345566777777777777777777765544555555555544332221 110 11122455666777888888887
Q ss_pred hhhhhhhcc-CCCHHHH
Q 014329 153 QGGLIGAAG-ELPDRYM 168 (426)
Q Consensus 153 q~s~~~la~-~fp~~~~ 168 (426)
......+.+ .+|++.-
T Consensus 133 ~~~~~~~~~e~~p~~~R 149 (502)
T TIGR00887 133 YPLSAIITSEFATKKWR 149 (502)
T ss_pred hHHHHHHHHHhcChhhH
Confidence 777777777 6787653
No 49
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=97.24 E-value=0.1 Score=53.57 Aligned_cols=321 Identities=14% Similarity=0.141 Sum_probs=150.8
Q ss_pred hHHHHHHhchhHhhcccc--CCCccchhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeec
Q 014329 49 LLPWNAFITAVDYFSYLY--PEASVDRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIK 126 (426)
Q Consensus 49 L~pwN~~ita~dyf~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~ 126 (426)
.+-=+.|--|.++..+.+ ...+. -.+..++.++.=+..+++-.+..|.+.|.=+..++++..++.+.+-.
T Consensus 42 Yl~RknF~~a~p~l~e~~~lsk~~l-G~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gf------- 113 (448)
T COG2271 42 YLTRKNFNLAMPALIEDGGLSKTQL-GILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGF------- 113 (448)
T ss_pred HHHHHhHhhccHHHHHhcCCCHHHH-HHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhh-------
Confidence 333444555555555433 22221 12333344444445555566689989888788888777666654321
Q ss_pred ccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhcc-CCCHHH----H----HHHHhccccccccchhHHHHHHHHHHHHh
Q 014329 127 GRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAG-ELPDRY----M----QALVAGTAGSALLSAGVLVSVLRILTKAV 197 (426)
Q Consensus 127 ~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~-~fp~~~----~----~a~~~G~g~a~~~~~Gv~~s~l~ii~~~~ 197 (426)
.....+..++.++.|.++|..-.......+ -||++= . .+-..|.+++ +.++.+ -..
T Consensus 114 -----s~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~-----~~~~~l-----a~~ 178 (448)
T COG2271 114 -----SPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALA-----PLVALL-----AFF 178 (448)
T ss_pred -----hhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchH-----HHHHHH-----HHH
Confidence 113333444555566666655544444444 355432 2 2333444444 444333 111
Q ss_pred cccCccccchhHHHHHHHHHHHHHHHHHHHHHhhcchhh------HHHHhhhhhhhhhhh-hhccCCCCccccchHHHH-
Q 014329 198 YTQDAIGLRKSANLYFAVGIVVMVICIVFYNVAHRLPVI------KYHEDLKIQAVNEEK-EEKGSLTGSMWRSAVWHI- 269 (426)
Q Consensus 198 ~~~~~~~~~~sa~~yF~i~~~~~~~~~~~~~~l~k~p~~------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v- 269 (426)
.+ ..+ +.+ .|+.-+++.+++.+++++.++-+|.. +.+.+.. .|+++ |++++ ..+.|++
T Consensus 179 ~~--~~~--w~~-~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~---~e~~~~~~~~~------~ls~~~i~ 244 (448)
T COG2271 179 AF--HGG--WRA-AFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDP---LEIYEEEKENE------GLTAWQIF 244 (448)
T ss_pred Hh--ccc--hhH-HHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCc---hhhhhhhccCC------CccHHHHH
Confidence 11 011 222 23334455555666667666655532 2222111 11111 11111 1233443
Q ss_pred ----HH--HHHHHHHHHHHHHhhhhccc---cceeeecccccCCCchHHHHHHHHHHhhhhhhhhhhhhhhc--ccchhH
Q 014329 270 ----VG--RVKWYGFGILLIYIVTLSIF---PGYITEDVHSEILKDWYGIILIAGYNVFDLVGKSLTAIYLL--ENEKVA 338 (426)
Q Consensus 270 ----~k--~i~~~~l~~fl~f~vTl~vF---P~i~~~~~~~~~~~~w~~~~~~~~FnvgD~iGR~~~~~~~~--~~~~~l 338 (426)
+| -+|..+++-+++|++=+.+- |-+..+..+ .+.-..-..+.+|=++-+.|-.+..|..- .+-||-
T Consensus 245 ~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~---~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~ 321 (448)
T COG2271 245 VKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKG---FSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRG 321 (448)
T ss_pred HHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcC---CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccc
Confidence 33 58999999999999866321 111111111 11112335678999999999999888653 333433
Q ss_pred HHHHHHH-HHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeeecCCC------CChhhHHHHhHHHHHHHH
Q 014329 339 IGGCFAR-LLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMILAPKV------VQLQHAETAGIVIVLFLV 411 (426)
Q Consensus 339 ~~~s~~R-~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ap~~------v~~~ere~ag~~~~~~l~ 411 (426)
....+.- .+++-+..+ -..|.. |.+...++.++.|+ .+|+|+- ++--.|+.||+...|.=.
T Consensus 322 p~~~i~~~~i~~~~~~~-w~~~~~--~~~l~~~~l~~iGf---------~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Gl 389 (448)
T COG2271 322 PMALIFMLLITASLVLY-WLAPNG--SYLLDAILLFIIGF---------LIYGPQMLIGLAAAEFVPKKAAGTATGFVGL 389 (448)
T ss_pred hHHHHHHHHHHHHHHHH-HcCCCc--cHHHHHHHHHHHHH---------HHhhHHHHHHHHHhccccHhhccchhchhhh
Confidence 2222211 111111111 011211 32334444444554 3555552 233457777777666666
Q ss_pred HHHHHHHHHH
Q 014329 412 LGLAAGSIVA 421 (426)
Q Consensus 412 ~Gl~~Gs~~s 421 (426)
.|-..|+.++
T Consensus 390 f~Yl~Ga~~a 399 (448)
T COG2271 390 FAYLIGAALA 399 (448)
T ss_pred HHHHhhHHhc
Confidence 6666565543
No 50
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=97.20 E-value=0.2 Score=52.61 Aligned_cols=85 Identities=11% Similarity=0.052 Sum_probs=46.5
Q ss_pred HHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchh-----hHHHHHHHHHhhhhhhhhhhhhhhh
Q 014329 85 FCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDG-----FTVTVGAVALSGLADALVQGGLIGA 159 (426)
Q Consensus 85 ~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~-----f~~~l~~v~~~g~~~~~~q~s~~~l 159 (426)
+..++.-.+.+|+..|.-+..+.+++.+..+...+. + .+.. ....++.=++.|++.|....+...+
T Consensus 72 ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~-----~----~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~ 142 (490)
T PRK10642 72 LGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLI-----P----SYATIGIWAPILLLLCKMAQGFSVGGEYTGASIF 142 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhc-----c----cHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHH
Confidence 344444456777776666666666666655543321 1 1111 1123445567788877777666666
Q ss_pred cc-CCCHH----HHHHHHhccccc
Q 014329 160 AG-ELPDR----YMQALVAGTAGS 178 (426)
Q Consensus 160 a~-~fp~~----~~~a~~~G~g~a 178 (426)
.+ .+|++ ....++.|..++
T Consensus 143 ~~e~~p~~~Rg~~~~~~~~~~~~G 166 (490)
T PRK10642 143 VAEYSPDRKRGFMGSWLDFGSIAG 166 (490)
T ss_pred HHHhCCCCCCcHHHHHHHHHHHHH
Confidence 66 46653 344445554444
No 51
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=97.12 E-value=0.058 Score=62.61 Aligned_cols=310 Identities=15% Similarity=0.038 Sum_probs=146.6
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhh
Q 014329 75 FAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQG 154 (426)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~ 154 (426)
...++.++..+.+.+.-.+..|++.|.-+.......++.. ...+... .. ..++..++..++.|++++....
T Consensus 57 ~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~-~~~~~~~-~~-------~s~~~l~~~~~l~gi~~a~~~p 127 (1140)
T PRK06814 57 AGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIA-ALAIYGF-HL-------NSVPLLFAALFLMGIHSALFGP 127 (1140)
T ss_pred HHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHH-HHHHHHH-HH-------hhHHHHHHHHHHHHHHHHhhch
Confidence 3446677777777776677777764431111111111111 1111111 00 1345566788889999999888
Q ss_pred hhhhhcc-CCCHHH----HHHHHhccccccccchhHHHHHHHHHHHHhcccCccccchhHHHHHHHHHHHHHHHHHHHHH
Q 014329 155 GLIGAAG-ELPDRY----MQALVAGTAGSALLSAGVLVSVLRILTKAVYTQDAIGLRKSANLYFAVGIVVMVICIVFYNV 229 (426)
Q Consensus 155 s~~~la~-~fp~~~----~~a~~~G~g~a~~~~~Gv~~s~l~ii~~~~~~~~~~~~~~sa~~yF~i~~~~~~~~~~~~~~ 229 (426)
...++.. .+|++. ++..+.+.+++ .++..++.-...... + ....|..+.++.+++++....
T Consensus 128 ~~~a~l~~~~~~~~~~~a~~~~~~~~~ig-----~~igp~l~g~l~~~~-----~----~~~~~~~~~~~~~~~~~~~~~ 193 (1140)
T PRK06814 128 IKYSILPDHLNKDELLGANALVEAGTFIA-----ILLGTIIGGLATISG-----N----FVILVALLMGIAVLGWLASLF 193 (1140)
T ss_pred HHHHhhHhhcCccccchhhHHHHHHHHHH-----HHHHHHHHHHHHhcc-----c----cHHHHHHHHHHHHHHHHHHhh
Confidence 8888776 466543 45566666666 666555444332221 1 122233333333333333333
Q ss_pred hhcchhhHHHHhhhhhhhhhhhhhccCCCCccccchHHHHHH--HHHHHHHHHHHHH---hhhhccccceeeecccccCC
Q 014329 230 AHRLPVIKYHEDLKIQAVNEEKEEKGSLTGSMWRSAVWHIVG--RVKWYGFGILLIY---IVTLSIFPGYITEDVHSEIL 304 (426)
Q Consensus 230 l~k~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~k--~i~~~~l~~fl~f---~vTl~vFP~i~~~~~~~~~~ 304 (426)
+++.+- ++ ++... +.... .+....++.+.| ..|...+..++.+ ...+..+|.+..+..+ .
T Consensus 194 ~~~~~~---------~~-~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g---~ 258 (1140)
T PRK06814 194 IPKTGN---------AA-PDLKI-DRNII-RSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLG---G 258 (1140)
T ss_pred CCCCCC---------CC-CCCee-ccchH-HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcC---C
Confidence 332210 00 00000 00000 000112223322 3344443333322 2234456665322111 1
Q ss_pred CchHHHHHHHHHHhhhhhhhhhhhhhhc-cc-chhHHHH-HHHHHHHHhhhhc--c-ccCCC-------cc--ccchhHH
Q 014329 305 KDWYGIILIAGYNVFDLVGKSLTAIYLL-EN-EKVAIGG-CFARLLFFPLFLG--C-LHGPK-------FF--RTEIPVT 369 (426)
Q Consensus 305 ~~w~~~~~~~~FnvgD~iGR~~~~~~~~-~~-~~~l~~~-s~~R~~fiPlf~~--c-~~~p~-------~~--~~d~~~~ 369 (426)
+....-.....+.+|-.+|.....+... .. .+.+... .+.=+..+.+.+. - ...+. +. .+.+..+
T Consensus 259 ~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (1140)
T PRK06814 259 DENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRIL 338 (1140)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHH
Confidence 2222334566777888888888765532 11 2222111 1111111111110 0 00000 01 4455666
Q ss_pred HHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHHH
Q 014329 370 LLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVAW 422 (426)
Q Consensus 370 il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s~ 422 (426)
+..+++|+..|...........+..+++++..+..+.++...+|..+|+.+.-
T Consensus 339 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g 391 (1140)
T PRK06814 339 IDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILA 391 (1140)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHH
Confidence 77778888888777665556566677788888877777777777777776543
No 52
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=97.08 E-value=0.13 Score=51.00 Aligned_cols=55 Identities=16% Similarity=0.139 Sum_probs=31.6
Q ss_pred hhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 366 IPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 366 ~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
+...+..++.|+..|......+.+..+..+ +++..+..+......+|..+|..++
T Consensus 289 ~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~ 343 (375)
T TIGR00899 289 WALLMLQLLNAIFIGILAGIGMLYFQDLMP-GRAGAATTLYTNTGRVGWIIAGSVG 343 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHH
Confidence 344555667788777766655555444433 3444555555555556766666543
No 53
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=97.06 E-value=0.18 Score=51.72 Aligned_cols=116 Identities=14% Similarity=-0.007 Sum_probs=59.5
Q ss_pred hhHhhccccCCCccc-hhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhH
Q 014329 58 AVDYFSYLYPEASVD-RIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFT 136 (426)
Q Consensus 58 a~dyf~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~ 136 (426)
+.++.++.+.-++.+ .....++.+...+.++..-.+.+|+..|.=+..++++..+..+..+. .+ .+.
T Consensus 30 ~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~-----~~-------~~~ 97 (412)
T TIGR02332 30 AGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMF-----AT-------GPE 97 (412)
T ss_pred HHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHH-----hc-------CHH
Confidence 445666655433222 23334455555555555555666666555444445444444433222 11 122
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhcc-CCCHHH----HHHHHhccccccccchhHHHHHH
Q 014329 137 VTVGAVALSGLADALVQGGLIGAAG-ELPDRY----MQALVAGTAGSALLSAGVLVSVL 190 (426)
Q Consensus 137 ~~l~~v~~~g~~~~~~q~s~~~la~-~fp~~~----~~a~~~G~g~a~~~~~Gv~~s~l 190 (426)
..++.-++.|++.+....+...+.+ .+|++. ++.++.|.+++ +++...+
T Consensus 98 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g-----~~~~~~~ 151 (412)
T TIGR02332 98 SLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVT-----MALGLIL 151 (412)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH-----HHHHHHH
Confidence 2334455677777766666655444 578643 45566666666 5555444
No 54
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.05 E-value=0.027 Score=59.50 Aligned_cols=197 Identities=13% Similarity=0.115 Sum_probs=106.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhh
Q 014329 73 RIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALV 152 (426)
Q Consensus 73 ~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~ 152 (426)
+.....+.+...++++....+.+|++ ...++....++-.++.++... . ..|.--+++=+++|++.|..
T Consensus 84 ~~~~t~F~v~Yii~~~p~~~L~~r~~----ls~~l~~~~~~w~~~~~~~~~-~-------~s~~~~ialr~llGl~es~~ 151 (495)
T KOG2533|consen 84 GVLDTVFYVGYIIGQFPSGLLGDRFP----LSKGLSVSGILWGLFGFLTAA-V-------HSFPGLIALRFLLGLFESGG 151 (495)
T ss_pred hhHHHHHHHHHHHHHhhHHHHHHhCC----hHHHHHHHHHHHHHHHHHHHH-H-------hhhHHHHHHHHHHHHHhccc
Confidence 45556677777777777777888988 222222222222222222211 1 23444556667788887777
Q ss_pred hhhhhhhccC-CCHH----HHHHHHhccccccccchhHHHHHHHHHHHHhcccCccccchhHHHHHHHHHHHHHHHHHHH
Q 014329 153 QGGLIGAAGE-LPDR----YMQALVAGTAGSALLSAGVLVSVLRILTKAVYTQDAIGLRKSANLYFAVGIVVMVICIVFY 227 (426)
Q Consensus 153 q~s~~~la~~-fp~~----~~~a~~~G~g~a~~~~~Gv~~s~l~ii~~~~~~~~~~~~~~sa~~yF~i~~~~~~~~~~~~ 227 (426)
-.+...+.+. |.++ -+..+.+.++++ ++++++++-...-... ..+...=...|.+.+++..+..++.|
T Consensus 152 wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g-----~i~ggliA~g~~~~~~--~~~~~gW~~~FiI~G~i~~~~gi~~f 224 (495)
T KOG2533|consen 152 WPGVVAILGNWYGKSERGLRMGIWYASASLG-----NIFGGLIAYGVFKLNG--SGGLAGWRWLFIIEGVITLVLGIVVF 224 (495)
T ss_pred chHHHHHHHhhcChhhhhhhHHHHHHhcchh-----hHHHHHHHHHhhhhcC--CCCcCCceeehhHHHHHHHHHHheEE
Confidence 7777777775 5543 246667777777 8888777655322111 11111112344455566666777778
Q ss_pred HHhhcchhhHHHHhhhhhh-hhhhhhhccCC--CCccccchHHHHHH--HHHHHHHHHHHHHhhhh
Q 014329 228 NVAHRLPVIKYHEDLKIQA-VNEEKEEKGSL--TGSMWRSAVWHIVG--RVKWYGFGILLIYIVTL 288 (426)
Q Consensus 228 ~~l~k~p~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~v~k--~i~~~~l~~fl~f~vTl 288 (426)
++++.+|..-...+.++++ ..++.|++++. +++.++..+++.+| ++|++.++.++...+..
T Consensus 225 ~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~ 290 (495)
T KOG2533|consen 225 FFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNY 290 (495)
T ss_pred EEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccc
Confidence 8898888632111111100 00111111111 11134567778877 68888888888877665
No 55
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.04 E-value=0.16 Score=54.89 Aligned_cols=102 Identities=15% Similarity=0.128 Sum_probs=62.1
Q ss_pred HHHhhhhhhhhhhhh-h-hcccchhH-HHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeeecC
Q 014329 315 GYNVFDLVGKSLTAI-Y-LLENEKVA-IGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMILAP 391 (426)
Q Consensus 315 ~FnvgD~iGR~~~~~-~-~~~~~~~l-~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ap 391 (426)
.+++|=..|-.+..+ . +..+.|+. ++.++...+|+-+....+ |.- .+ ..+.+.++-|+.-|+....++..+.
T Consensus 357 ~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~--~~n-~~--~~i~~~~l~g~giG~~~~~~~~~~q 431 (599)
T PF06609_consen 357 PVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVR--PDN-KN--AAIAFLVLAGFGIGGILVPAIVIAQ 431 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHcc--CCC-cc--hHHHHHHHHHHhHHHHHHHHHHeeE
Confidence 345555555443222 1 12344444 344555555555544333 221 12 2356677888888999999988887
Q ss_pred CCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 392 KVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 392 ~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
-.+++|+-..+..++...=.+|-.+|..+.
T Consensus 432 l~~p~~~ig~a~gL~~s~R~~GGsIg~aIy 461 (599)
T PF06609_consen 432 LIVPDEDIGTATGLTGSIRSIGGSIGYAIY 461 (599)
T ss_pred eeeCchHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 777888888888888877777777777654
No 56
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=97.04 E-value=0.11 Score=52.41 Aligned_cols=99 Identities=11% Similarity=-0.066 Sum_probs=60.1
Q ss_pred HHHHHHhhhhhhhhhhhh-hhcccchhHH----HHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhhe
Q 014329 312 LIAGYNVFDLVGKSLTAI-YLLENEKVAI----GGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVL 386 (426)
Q Consensus 312 ~~~~FnvgD~iGR~~~~~-~~~~~~~~l~----~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~ 386 (426)
.+....++..++..+..+ .++.++|+++ +...+|.+..+ +.++.+..+..+++.|++-|-+...+
T Consensus 245 l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~----------~~~~~~~~~~~q~l~g~~~~~~~~~~ 314 (382)
T TIGR00902 245 LWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIG----------AIEAFPLIFLLQILHCGTFAVCHLAA 314 (382)
T ss_pred HHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHH----------hHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 344566777777766543 3344555543 33333433221 23444667788999999999999999
Q ss_pred eeecCCCCChhhHHHHhHH-HHHHHHHHHHHHHHHH
Q 014329 387 MILAPKVVQLQHAETAGIV-IVLFLVLGLAAGSIVA 421 (426)
Q Consensus 387 mi~ap~~v~~~ere~ag~~-~~~~l~~Gl~~Gs~~s 421 (426)
|.+..+. ++++|..+-.+ ......+|..+|+.++
T Consensus 315 ~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~ 349 (382)
T TIGR00902 315 MRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFA 349 (382)
T ss_pred HHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888766 66555443333 3345666777776654
No 57
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=97.01 E-value=0.14 Score=51.16 Aligned_cols=80 Identities=18% Similarity=0.048 Sum_probs=43.1
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhh
Q 014329 75 FAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQG 154 (426)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~ 154 (426)
....+.+...+.....-.+.+|...|.-+..+.++..+..+.... .+ .++..++..++.|++.+....
T Consensus 31 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~-----~~-------~~~~~~~~~~l~g~~~~~~~~ 98 (377)
T PRK11102 31 TLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACAL-----AQ-------TIDQLIYMRFLHGLAAAAASV 98 (377)
T ss_pred HHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHH-----Hc-------cHHHHHHHHHHHHHHHHHHHH
Confidence 334556666666666666777776544444455444444433221 11 123344455667777777666
Q ss_pred hhhhhcc-CCCHH
Q 014329 155 GLIGAAG-ELPDR 166 (426)
Q Consensus 155 s~~~la~-~fp~~ 166 (426)
...++.. .+|++
T Consensus 99 ~~~~~~~~~~~~~ 111 (377)
T PRK11102 99 VINALMRDMFPKE 111 (377)
T ss_pred HHHHHHHHhcCHH
Confidence 5555554 46654
No 58
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=96.97 E-value=0.14 Score=53.01 Aligned_cols=94 Identities=17% Similarity=0.110 Sum_probs=52.5
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhh
Q 014329 75 FAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQG 154 (426)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~ 154 (426)
+..++.+...+.+...-.+.+|+..|.-+..+.++..+..+..+... . ..++..++.-++.|++.+....
T Consensus 81 ~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~---~-------~~~~~l~~~r~~~G~~~~~~~~ 150 (465)
T TIGR00894 81 ILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAA---G-------GGIALVVFCRVIQGLAQGSVSP 150 (465)
T ss_pred HHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHH---H-------cCchHHHHHHHHHHHhcccchh
Confidence 44556666777777766777777765555555554444433332210 0 1233344556677777777777
Q ss_pred hhhhhcc-CCCHHH----HHHHHhccccc
Q 014329 155 GLIGAAG-ELPDRY----MQALVAGTAGS 178 (426)
Q Consensus 155 s~~~la~-~fp~~~----~~a~~~G~g~a 178 (426)
....+.+ .+|++. ++....|..++
T Consensus 151 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 179 (465)
T TIGR00894 151 ATHKIIVKWAPPKERSRLLGMSTSGFQLG 179 (465)
T ss_pred hHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence 7666666 477654 33344445555
No 59
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=96.95 E-value=0.14 Score=51.57 Aligned_cols=102 Identities=7% Similarity=-0.214 Sum_probs=50.1
Q ss_pred HHHHHhhhhhhhhhhhhh-hcccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeeecC
Q 014329 313 IAGYNVFDLVGKSLTAIY-LLENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMILAP 391 (426)
Q Consensus 313 ~~~FnvgD~iGR~~~~~~-~~~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ap 391 (426)
..+-.++..+++....+. ++.++++....+..=... -.+.+. +.++.+..++.++++|++.|......+.+..
T Consensus 246 ~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~ 319 (382)
T PRK11128 246 WSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVV-RWGLMG-----STTALPWLIVIQILHCGTFTVCHLAAMRYIA 319 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH-HHHHHH-----hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 335556777776665332 233444433222211110 011111 1234455677888999999988777776665
Q ss_pred CCCChhhHHHHhHHHHHHHHHHHHHHHHH
Q 014329 392 KVVQLQHAETAGIVIVLFLVLGLAAGSIV 420 (426)
Q Consensus 392 ~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~ 420 (426)
+..+++.....+....+....|..+|..+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~g~~ig~~i 348 (382)
T PRK11128 320 ARPGSEVIRLQALYSALAMGGSIAIMTVL 348 (382)
T ss_pred HCCHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 55333332222333334444555555543
No 60
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=96.88 E-value=0.4 Score=48.86 Aligned_cols=105 Identities=16% Similarity=0.163 Sum_probs=51.5
Q ss_pred HHHHHHhhhhhhhhhhhhhh-cccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeeec
Q 014329 312 LIAGYNVFDLVGKSLTAIYL-LENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMILA 390 (426)
Q Consensus 312 ~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~a 390 (426)
......++-.+|..+..+.. +.++|+.+..... +..+....+... + ++.+..++.+++.|+..|-.........
T Consensus 262 ~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~-~~~~~~~~~~~~-~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 336 (437)
T TIGR00792 262 MGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGIL-LMVLGYLIFFFA-G---SNLPLILVLIILAGFGQNFVTGLVWALV 336 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH-HHHHHHHHHHHc-c---hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456788888776644322 2334444332221 111111111111 1 2224445666777787776665555444
Q ss_pred CCCCCh-------hhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 391 PKVVQL-------QHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 391 p~~v~~-------~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
++.++. +.+..+..+.+++..+|..+|..+.
T Consensus 337 ~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~ 374 (437)
T TIGR00792 337 ADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLV 374 (437)
T ss_pred hhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 444432 2234445566667777777776554
No 61
>PRK15011 sugar efflux transporter B; Provisional
Probab=96.82 E-value=0.26 Score=49.94 Aligned_cols=52 Identities=17% Similarity=0.103 Sum_probs=27.8
Q ss_pred HHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 369 TLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 369 ~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
.+.+++.++..|........+..+.. +++|..+..+.......|..+|+.++
T Consensus 309 l~~~~l~~~~~g~~~~~~~~~~~~~~-p~~~g~~~~~~~~~~~lg~~~g~~l~ 360 (393)
T PRK15011 309 LGLQLLNAIYIGILGGIGMLYFQDLM-PGQAGSATTLYTNTSRVGWIIAGSLA 360 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 34444455555554443333322222 34566666666566677777777655
No 62
>PRK03893 putative sialic acid transporter; Provisional
Probab=96.80 E-value=0.28 Score=51.04 Aligned_cols=114 Identities=13% Similarity=0.079 Sum_probs=59.6
Q ss_pred HHHhchhHhhccccCCCcc-chhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCc
Q 014329 53 NAFITAVDYFSYLYPEASV-DRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGL 131 (426)
Q Consensus 53 N~~ita~dyf~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~ 131 (426)
+......+++.+.+.-++- ...+...+.+...+.....-.+.+|+..|.-+..+.++..+..+.... .+
T Consensus 37 ~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-----~~----- 106 (496)
T PRK03893 37 VLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGF-----AP----- 106 (496)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH-----Hh-----
Confidence 3333344666655543322 223334455566666666666777776555555555554444433221 11
Q ss_pred chhhHHHHHHHHHhhhhhhhhhhhhhhhcc-CCCHHHH----HHHHhccccc
Q 014329 132 YDGFTVTVGAVALSGLADALVQGGLIGAAG-ELPDRYM----QALVAGTAGS 178 (426)
Q Consensus 132 ~~~f~~~l~~v~~~g~~~~~~q~s~~~la~-~fp~~~~----~a~~~G~g~a 178 (426)
.++..++..++.|++.+..+....++.. .+|++.. +....|.+++
T Consensus 107 --~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 156 (496)
T PRK03893 107 --GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIG 156 (496)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 2344455666778877766666555544 5776642 3344445555
No 63
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=96.79 E-value=0.74 Score=46.73 Aligned_cols=134 Identities=8% Similarity=-0.048 Sum_probs=67.0
Q ss_pred HHHHHhhhhhHHHHHHhchhHhhccc--cCCCccchhhHHHHHHHHHHHHHHHHHhhcCCC-----cceEeh-hHHHHHH
Q 014329 40 IYFTLGLGFLLPWNAFITAVDYFSYL--YPEASVDRIFAVAYMLVGLFCLVIIVFYAHKSD-----AWVRIN-VGLGLFV 111 (426)
Q Consensus 40 ~f~llGi~~L~pwN~~ita~dyf~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~s-----~~~Ri~-~~l~~~~ 111 (426)
.|+.++...=+|.....++.+.|-+. ++.+++.-. ... ..+ .+...+.-.+.+|.+ .|.|+. .+.+...
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~-~~~-~~~-~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~ 79 (402)
T PRK11902 3 AMLLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFF-SLV-GQA-YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLA 79 (402)
T ss_pred hHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHH-HHH-HHH-HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHH
Confidence 37788888889999999998666432 222222211 211 222 344444445566763 334433 3344443
Q ss_pred HHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhcc-CCCHH----HHHHHHhccccccccchhHH
Q 014329 112 VALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAG-ELPDR----YMQALVAGTAGSALLSAGVL 186 (426)
Q Consensus 112 v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~-~fp~~----~~~a~~~G~g~a~~~~~Gv~ 186 (426)
+++..+.. .+ ....++...+..++.+.+.+......-+++. .+|+| +....+.|++++ .++
T Consensus 80 l~~~~l~~-----~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g-----~i~ 145 (402)
T PRK11902 80 ASIAAMAF-----CP----PHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLA-----MLV 145 (402)
T ss_pred HHHHHHHh-----cC----ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHH-----HHH
Confidence 33333221 11 1112232333334455566655555445544 46654 555667777777 666
Q ss_pred HHHH
Q 014329 187 VSVL 190 (426)
Q Consensus 187 ~s~l 190 (426)
...+
T Consensus 146 g~~l 149 (402)
T PRK11902 146 SGGL 149 (402)
T ss_pred HhHH
Confidence 5443
No 64
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=96.78 E-value=0.32 Score=51.16 Aligned_cols=56 Identities=18% Similarity=0.124 Sum_probs=44.2
Q ss_pred hhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 366 IPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 366 ~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
+..+..+++.|+..|.........+-+.+++|++..++.+.++.-.+|-.+|..++
T Consensus 352 ~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~ 407 (495)
T PRK14995 352 WQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIF 407 (495)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 44566778889998887766666666678889999999999999999988887654
No 65
>TIGR00901 2A0125 AmpG-related permease.
Probab=96.74 E-value=0.11 Score=51.49 Aligned_cols=40 Identities=18% Similarity=0.168 Sum_probs=27.6
Q ss_pred hhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHH
Q 014329 366 IPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIV 405 (426)
Q Consensus 366 ~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~ 405 (426)
+..+..+++.++.+|......+.+..+..++|+|-..-.+
T Consensus 310 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 349 (356)
T TIGR00901 310 LMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMAL 349 (356)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHH
Confidence 4455566677888888888777777777777666554433
No 66
>PRK11043 putative transporter; Provisional
Probab=96.66 E-value=0.89 Score=45.92 Aligned_cols=111 Identities=7% Similarity=-0.049 Sum_probs=56.1
Q ss_pred hhhhhHHHHHHhchhHhhccccCCCcc-chhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhhe
Q 014329 45 GLGFLLPWNAFITAVDYFSYLYPEASV-DRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAV 123 (426)
Q Consensus 45 Gi~~L~pwN~~ita~dyf~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~ 123 (426)
+....+.++.+....+.+++.+.-++- .......+.+...+.....-.+.+|...|.-+..+..+..+..+....
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~---- 90 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLW---- 90 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHH----
Confidence 444556677777666666655543222 223334556666666666666777777655454454444433332211
Q ss_pred eecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhcc-CCCHHH
Q 014329 124 YIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAG-ELPDRY 167 (426)
Q Consensus 124 ~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~-~fp~~~ 167 (426)
.+ .++..++.-.+.|++.+......-++.. .+|++-
T Consensus 91 -~~-------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~ 127 (401)
T PRK11043 91 -VE-------SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK 127 (401)
T ss_pred -hc-------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH
Confidence 11 1233334445556655544443334433 577653
No 67
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=96.63 E-value=0.91 Score=45.75 Aligned_cols=29 Identities=17% Similarity=-0.051 Sum_probs=22.5
Q ss_pred hHHHHHHhhhhhHHHHHHhchhHhhcccc
Q 014329 38 YIIYFTLGLGFLLPWNAFITAVDYFSYLY 66 (426)
Q Consensus 38 y~~f~llGi~~L~pwN~~ita~dyf~~~~ 66 (426)
++.++.++...=+|++......++|-+..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~ 31 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLRED 31 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHc
Confidence 56677777778889999999887776544
No 68
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=96.60 E-value=0.65 Score=46.77 Aligned_cols=106 Identities=13% Similarity=0.090 Sum_probs=56.1
Q ss_pred HHHHHHhchhHhhccccCCCcc-chhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeeccc
Q 014329 50 LPWNAFITAVDYFSYLYPEASV-DRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGR 128 (426)
Q Consensus 50 ~pwN~~ita~dyf~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~ 128 (426)
...+....+.+.+.+++..++- .......+.+...+.....-.+.+|...|.-+..+.+...+..+.... .+
T Consensus 17 ~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~-----~~-- 89 (392)
T PRK10473 17 AGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSL-----AE-- 89 (392)
T ss_pred HHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHH-----hC--
Confidence 3445555666666665543322 223444556666666666666777776554444444444443332211 11
Q ss_pred CCcchhhHHHHHHHHHhhhhhhhhhhhhhhhcc-CCCHHH
Q 014329 129 VGLYDGFTVTVGAVALSGLADALVQGGLIGAAG-ELPDRY 167 (426)
Q Consensus 129 ~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~-~fp~~~ 167 (426)
.++..++.-.+.|++.+..+....++.. .+|++.
T Consensus 90 -----~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~ 124 (392)
T PRK10473 90 -----TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRR 124 (392)
T ss_pred -----cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH
Confidence 1222334455678888877776776665 566543
No 69
>PRK03633 putative MFS family transporter protein; Provisional
Probab=96.59 E-value=0.87 Score=45.78 Aligned_cols=101 Identities=15% Similarity=0.083 Sum_probs=52.8
Q ss_pred HHHHHHHhhhhhhhhhhhhhh-cccchhHHH-HHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheee
Q 014329 311 ILIAGYNVFDLVGKSLTAIYL-LENEKVAIG-GCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMI 388 (426)
Q Consensus 311 ~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~-~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi 388 (426)
....++.++..+||....+.. +.++|+.+. ......+..-++. + + ......++++|+..+-....++.
T Consensus 239 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~-----~----~-~~~~~~~~l~g~~~~~~~p~~~~ 308 (381)
T PRK03633 239 FWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML-----S----Q-AAMAPALFILGAAGFTLYPVAMA 308 (381)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh-----h----h-HHHHHHHHHHHHHHHhHHHHHHH
Confidence 346677888999998765443 234444322 1222221111111 1 1 12233455667665544455555
Q ss_pred ecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 389 LAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 389 ~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
...+..+++++..+......+..+|-.+|..++
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~ 341 (381)
T PRK03633 309 WACEKVEHHELVAMNQALLLSYTVGSLLGPSFT 341 (381)
T ss_pred HHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556666666655555555566677777776554
No 70
>PRK10091 MFS transport protein AraJ; Provisional
Probab=96.59 E-value=0.79 Score=46.18 Aligned_cols=126 Identities=11% Similarity=0.051 Sum_probs=66.2
Q ss_pred hhHHHHHHhhhhhHHHHHHhchhHhhccccCCCc-cchhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHH
Q 014329 37 AYIIYFTLGLGFLLPWNAFITAVDYFSYLYPEAS-VDRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALL 115 (426)
Q Consensus 37 ~y~~f~llGi~~L~pwN~~ita~dyf~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i 115 (426)
.....+..|++... .....+.+++++.-++ .......++.+...+.....-.+.+|.+.|.-+..+..+..+..+
T Consensus 8 ~~~~~~~~~~~~~~----~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 83 (382)
T PRK10091 8 LALGTFGLGMAEFG----IMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNA 83 (382)
T ss_pred HHHHHHHHHhhHHH----HHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHH
Confidence 33444555554433 2223344555554322 223455567777777777777788888766555555555554443
Q ss_pred HHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhcc-CCCHHH----HHHHHhccccc
Q 014329 116 VVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAG-ELPDRY----MQALVAGTAGS 178 (426)
Q Consensus 116 ~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~-~fp~~~----~~a~~~G~g~a 178 (426)
.... .+ .++..++.-++.|++.+........+.+ .+|++. ++-+..|++++
T Consensus 84 l~~~-----~~-------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 139 (382)
T PRK10091 84 MFTL-----SS-------SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVA 139 (382)
T ss_pred HHHH-----hC-------cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHH
Confidence 3221 11 1233444556777777665554444444 466543 33334555565
No 71
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=96.57 E-value=0.74 Score=46.79 Aligned_cols=106 Identities=14% Similarity=0.040 Sum_probs=55.1
Q ss_pred HHHHHHHhhhhhhhhhhhhhhc-ccchhHH--HHHHHHHHH-HhhhhccccCCCccccchhHHHHHHHHhhhcchhhhhe
Q 014329 311 ILIAGYNVFDLVGKSLTAIYLL-ENEKVAI--GGCFARLLF-FPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVL 386 (426)
Q Consensus 311 ~~~~~FnvgD~iGR~~~~~~~~-~~~~~l~--~~s~~R~~f-iPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~ 386 (426)
.....+.++..+|+....+... .++|+.. ...++-.+. +.+...-.. ..++.+..++..+++|+..|......
T Consensus 261 ~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~G~~~~~~~~~~ 337 (402)
T TIGR00897 261 QIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQH---FGHSFAVALIIAIALGIFLAGYVPLA 337 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHc---cCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445677888999888655432 2333322 111222211 111111000 11233455566777787776554332
Q ss_pred eeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 387 MILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 387 mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
. ......+++|..+-.+.+....+|-.+|..++
T Consensus 338 ~--~~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~ 370 (402)
T TIGR00897 338 A--VFPTLAPKHKGAAMSVLNLSAGLSAFLAPAIA 370 (402)
T ss_pred H--HHHhhCcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 12234556788888878888777777766544
No 72
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=96.34 E-value=0.57 Score=47.36 Aligned_cols=53 Identities=13% Similarity=0.106 Sum_probs=28.3
Q ss_pred hhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHH-HHHHHHHHHHHHH
Q 014329 366 IPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIV-IVLFLVLGLAAGS 418 (426)
Q Consensus 366 ~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~-~~~~l~~Gl~~Gs 418 (426)
+...+..++.|++.+......+.+.++..+++.+..+... .++...+|-.+|.
T Consensus 308 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~ 361 (396)
T TIGR00882 308 LEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLS 361 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHH
Confidence 4455667777777776666566566655554443332222 2344444544443
No 73
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=96.15 E-value=0.41 Score=47.31 Aligned_cols=244 Identities=13% Similarity=0.090 Sum_probs=112.1
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhhhhhccCC-CH----HHHHHHHhccccccccchhHHHHHHHHHHHHhcccCc------
Q 014329 134 GFTVTVGAVALSGLADALVQGGLIGAAGEL-PD----RYMQALVAGTAGSALLSAGVLVSVLRILTKAVYTQDA------ 202 (426)
Q Consensus 134 ~f~~~l~~v~~~g~~~~~~q~s~~~la~~f-p~----~~~~a~~~G~g~a~~~~~Gv~~s~l~ii~~~~~~~~~------ 202 (426)
.|...++..++.|.+.+++|.+.=.+.+.. |+ +.++-...-+|++ .++..++--........+.
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G-----~~~gP~i~~~~i~~~~~~~~~~~~~ 83 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLG-----TTVAPLFGGSLILSGAGDLSMQVAT 83 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhH-----HHHHHHHHHHHHhcCCcchhhhhhh
Confidence 577788899999999999999999999854 44 2344445555555 5555443332211110010
Q ss_pred --cccchhHHHHHHHHHHHHHHHHHHHHHhhcchhhHHHHhhhhhhhhhhhhhccCCCCccccchHHHHHHHHHHHHHHH
Q 014329 203 --IGLRKSANLYFAVGIVVMVICIVFYNVAHRLPVIKYHEDLKIQAVNEEKEEKGSLTGSMWRSAVWHIVGRVKWYGFGI 280 (426)
Q Consensus 203 --~~~~~sa~~yF~i~~~~~~~~~~~~~~l~k~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~k~i~~~~l~~ 280 (426)
.+...-...|+.++.+..++.++. ...+.|..+. ++ + +++.+.+ ..++.+.++ .++.|...+..
T Consensus 84 ~~~~~~~~~~~yl~ia~~~~~~~i~~--~~~~~p~~~~------~~--~--~~~~~~~-~~~~~~~~~-~~~~~l~~~~~ 149 (310)
T TIGR01272 84 ANAEAAKVHTPYLLLAGALAVLAIIF--AFLPLPELQE------AD--V--ARVSSGD-TTQKTSAFQ-FTHLVLGALGI 149 (310)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHH--HHccCCCCCc------cc--c--ccccccc-ccchhhHHh-hHHHHHHHHHH
Confidence 001123456776777655555422 2223332110 00 0 0000000 001111111 23344333333
Q ss_pred HHHHhhhh----ccccceeeecccccCCCchHHHHHHHHHHhhhhhhhhhhhhhh-cccchhH-HHHHHHHHHHHhhhhc
Q 014329 281 LLIYIVTL----SIFPGYITEDVHSEILKDWYGIILIAGYNVFDLVGKSLTAIYL-LENEKVA-IGGCFARLLFFPLFLG 354 (426)
Q Consensus 281 fl~f~vTl----~vFP~i~~~~~~~~~~~~w~~~~~~~~FnvgD~iGR~~~~~~~-~~~~~~l-~~~s~~R~~fiPlf~~ 354 (426)
| .|.-.- .-+|.+..+ .+....++-..-..+..|..+-.+||.+..+.. +.++++. .+..++-.+...++.
T Consensus 150 f-~yvg~e~~~~~w~~~yl~~-~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~- 226 (310)
T TIGR01272 150 F-VYVGAEVSAGSFLVNFLSD-PHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAA- 226 (310)
T ss_pred H-HHHHHHHHHHHHHHHHHHh-cccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH-
Confidence 3 343111 113333211 111111122223447788888888998865543 3344443 333322222221111
Q ss_pred cccCCCccccchhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHH
Q 014329 355 CLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIV 407 (426)
Q Consensus 355 c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~ 407 (426)
..+ + .......+++|+.+|-.....+..+.+..+++.+ .+..++.
T Consensus 227 --~~~----~-~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~-~asai~~ 271 (310)
T TIGR01272 227 --LTH----G-YVAMWFVLALGLFNSIMFPTIFSLALNALGRHTS-QGSGILC 271 (310)
T ss_pred --HcC----C-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-hhHHHHH
Confidence 111 1 1223345577888887777777777666555433 3444443
No 74
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=96.11 E-value=0.76 Score=46.53 Aligned_cols=122 Identities=10% Similarity=0.054 Sum_probs=62.2
Q ss_pred HHHHhchhHhhccccCCCccc-hhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCC
Q 014329 52 WNAFITAVDYFSYLYPEASVD-RIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVG 130 (426)
Q Consensus 52 wN~~ita~dyf~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~ 130 (426)
|-.+-...+..++++.-++-+ .....++.+...+.++..-.+.+|+. |.|+..+.....+.... ... ..
T Consensus 7 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~g-rr~~~~~~~~~~~~~~~----~~~-~~---- 76 (368)
T TIGR00903 7 WVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAF-KRWFLFGSLATFAAAAG----RLL-DP---- 76 (368)
T ss_pred HHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-chHHHHHHHHHHHHHHH----HHH-Hh----
Confidence 444444555555555332222 23344556666666666666777775 33444333322222111 110 00
Q ss_pred cchhhHHHHHHHHHhhhhhhhhhhhhhhhccCCCHHH----HHHHHhccccccccchhHHHHHH
Q 014329 131 LYDGFTVTVGAVALSGLADALVQGGLIGAAGELPDRY----MQALVAGTAGSALLSAGVLVSVL 190 (426)
Q Consensus 131 ~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~~fp~~~----~~a~~~G~g~a~~~~~Gv~~s~l 190 (426)
+ .|...++.-++.|++.+....+...++..+|++. ++-+..|++++ +++..++
T Consensus 77 ~--~~~~l~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG-----~~l~~~~ 133 (368)
T TIGR00903 77 F--NYEWLLACQLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLG-----IIFALAA 133 (368)
T ss_pred c--cHHHHHHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH-----HHHHHHH
Confidence 1 3445566666678777766555555667788653 44455666666 6655443
No 75
>PRK10429 melibiose:sodium symporter; Provisional
Probab=96.02 E-value=0.15 Score=53.40 Aligned_cols=107 Identities=12% Similarity=-0.032 Sum_probs=49.8
Q ss_pred HHHHHHhchhHhhcccc-CCCccchhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeeccc
Q 014329 50 LPWNAFITAVDYFSYLY-PEASVDRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGR 128 (426)
Q Consensus 50 ~pwN~~ita~dyf~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~ 128 (426)
...+...+...||-+.. .+.+....+.....+..++...+..++.+|+..+.....+.++.++..+...... ...
T Consensus 245 ~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~--~~~-- 320 (473)
T PRK10429 245 IASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMG--LAA-- 320 (473)
T ss_pred HHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHh--ccC--
Confidence 33444444344554433 2222222333334456666666666777787766555555554443333221110 111
Q ss_pred CCcchhhHHHHHHHHHhhhhhhhhhhhhhhhccCC
Q 014329 129 VGLYDGFTVTVGAVALSGLADALVQGGLIGAAGEL 163 (426)
Q Consensus 129 ~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~~f 163 (426)
+ . ..+..++..++.|++.+..+....++.+..
T Consensus 321 ~-~--~~~~~~i~~~l~g~~~~~~~~~~~am~ad~ 352 (473)
T PRK10429 321 P-H--NALLIVIAGILLNIGTALFWVLQVIMVADT 352 (473)
T ss_pred c-h--hHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 1 1 122333444556666666666655555543
No 76
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=96.01 E-value=0.62 Score=46.19 Aligned_cols=108 Identities=14% Similarity=0.125 Sum_probs=54.2
Q ss_pred hhHhhccccCCCcc-chhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhH
Q 014329 58 AVDYFSYLYPEASV-DRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFT 136 (426)
Q Consensus 58 a~dyf~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~ 136 (426)
..+.+++.+.-++- .......+.+...+.....-++.+|+..|.-+..+.++..+..+.. . .+ .++
T Consensus 22 ~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~----~--~~-------~~~ 88 (355)
T TIGR00896 22 LLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR----S--AP-------GTA 88 (355)
T ss_pred cHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH----H--hc-------cHH
Confidence 44556665543222 2334455666666666676777778776655555544433322211 1 11 122
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhccC-CCHH---HHHHHHhccccc
Q 014329 137 VTVGAVALSGLADALVQGGLIGAAGE-LPDR---YMQALVAGTAGS 178 (426)
Q Consensus 137 ~~l~~v~~~g~~~~~~q~s~~~la~~-fp~~---~~~a~~~G~g~a 178 (426)
..++...+.|++.+..+...-.+... +|++ .++.+..+++++
T Consensus 89 ~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 134 (355)
T TIGR00896 89 LLFAGTALIGVGIAIINVLLPSLIKRDFPQRVGLMTGLYSMALMGG 134 (355)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHhCcchhhHHHHHHHHHHHHH
Confidence 23444556666666655554444443 3433 344445555555
No 77
>PF13347 MFS_2: MFS/sugar transport protein
Probab=95.98 E-value=1.2 Score=45.71 Aligned_cols=60 Identities=15% Similarity=0.170 Sum_probs=40.4
Q ss_pred ccchhHHHHHHHHhhhcchhhhheeeecCCCCChhhH----HHH---hHHHHHHHHHHHHHHHHHHH
Q 014329 363 RTEIPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHA----ETA---GIVIVLFLVLGLAAGSIVAW 422 (426)
Q Consensus 363 ~~d~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~er----e~a---g~~~~~~l~~Gl~~Gs~~s~ 422 (426)
.+.+..++..++.|+..|-........-++.++.+|. +.. ..+.++..-.|..+|..+..
T Consensus 313 ~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g 379 (428)
T PF13347_consen 313 GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVG 379 (428)
T ss_pred hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHH
Confidence 4557778888899999988887777777877774432 233 44455666666666666544
No 78
>PRK09952 shikimate transporter; Provisional
Probab=95.96 E-value=2.1 Score=44.19 Aligned_cols=91 Identities=13% Similarity=0.090 Sum_probs=45.5
Q ss_pred HHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCc--chhhHHHHHHHHHhhhhhhhhhhhhhhhcc-CCC
Q 014329 88 VIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGL--YDGFTVTVGAVALSGLADALVQGGLIGAAG-ELP 164 (426)
Q Consensus 88 l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~--~~~f~~~l~~v~~~g~~~~~~q~s~~~la~-~fp 164 (426)
++.-.+.+|+..|.-+..+.++..+..+.... .++ ..+ .......++.=.+.|++.|....+...+.+ .+|
T Consensus 82 ~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p 155 (438)
T PRK09952 82 VVFGHFGDRLGRKRMLMLTVWMMGIATALIGL-----LPS-FSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAP 155 (438)
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHHHHhc-----CCc-HHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCC
Confidence 33445567776655555555555554443322 110 000 001112334455677777665555455555 467
Q ss_pred HHH----HHHHHhccccccccchhHHHHH
Q 014329 165 DRY----MQALVAGTAGSALLSAGVLVSV 189 (426)
Q Consensus 165 ~~~----~~a~~~G~g~a~~~~~Gv~~s~ 189 (426)
++. ....+.|.+++ .++...
T Consensus 156 ~~~rg~~~~~~~~g~~~G-----~~l~~~ 179 (438)
T PRK09952 156 KNKKAFYSSGVQVGYGVG-----LLLSTG 179 (438)
T ss_pred CCCCcHHHHHHHHHHHHH-----HHHHHH
Confidence 543 45566666666 555543
No 79
>PRK09528 lacY galactoside permease; Reviewed
Probab=95.87 E-value=0.32 Score=49.71 Aligned_cols=36 Identities=14% Similarity=0.179 Sum_probs=20.6
Q ss_pred hhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHH
Q 014329 366 IPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAET 401 (426)
Q Consensus 366 ~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ 401 (426)
+......++.|+..+-.....+.+.++..+++.+..
T Consensus 316 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~ 351 (420)
T PRK09528 316 LEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSAT 351 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceee
Confidence 444555666677666655555556666665555443
No 80
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=95.86 E-value=2.4 Score=42.96 Aligned_cols=113 Identities=10% Similarity=0.078 Sum_probs=67.1
Q ss_pred HHHHhhhhhHHHHHHhc-hhHhhccccCCCcc-chhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHh
Q 014329 41 YFTLGLGFLLPWNAFIT-AVDYFSYLYPEASV-DRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVP 118 (426)
Q Consensus 41 f~llGi~~L~pwN~~it-a~dyf~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~ 118 (426)
..+.|+ ...++...++ ..+-.++++.-++- .......+.+...+.+...-.+.+|...|.=+..+..+..+..+...
T Consensus 14 ~~~~~~-~~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~ 92 (393)
T PRK09705 14 LVLIGL-NMRPLLTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRE 92 (393)
T ss_pred HHHHHH-HcchhhhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 445554 3334444444 34666666653332 23344456666666777767778887766667777777766665443
Q ss_pred hhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhccC-CCHH
Q 014329 119 VMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAGE-LPDR 166 (426)
Q Consensus 119 ~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~~-fp~~ 166 (426)
.. + .+...++.-++.|++.+..+.....+... +|++
T Consensus 93 ~a-----~-------~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~~ 129 (393)
T PRK09705 93 LY-----P-------QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQQR 129 (393)
T ss_pred HC-----c-------chHHHHHHHHHHHhHHHHHhhhhhHHHHHHcccc
Confidence 21 1 23334556778888888888777777664 5543
No 81
>PRK10054 putative transporter; Provisional
Probab=95.84 E-value=1.9 Score=43.91 Aligned_cols=38 Identities=13% Similarity=0.152 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHH
Q 014329 78 AYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALL 115 (426)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i 115 (426)
.+.+...+.+...-.+.+|+..|.-+..+.+...+..+
T Consensus 51 ~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~ 88 (395)
T PRK10054 51 IALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFI 88 (395)
T ss_pred HHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHH
Confidence 34445555555556677787766544455544444333
No 82
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=95.77 E-value=2.6 Score=42.74 Aligned_cols=80 Identities=14% Similarity=0.112 Sum_probs=52.4
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhh
Q 014329 72 DRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADAL 151 (426)
Q Consensus 72 ~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~ 151 (426)
......+|.++..+...+.-.+.+|++.|.=+..+..+..+..+.... .. . . ++.-++.|++.+.
T Consensus 40 ~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~-----~~----~---~---~~~r~l~G~~~a~ 104 (393)
T PRK11195 40 QPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLF-----GI----H---P---LLAYGLVGIGAAA 104 (393)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHH-----HH----H---H---HHHHHHHHHHHHH
Confidence 345566777888877777777888888776666676666554332211 01 1 1 2334567899999
Q ss_pred hhhhhhhhcc-CCCHH
Q 014329 152 VQGGLIGAAG-ELPDR 166 (426)
Q Consensus 152 ~q~s~~~la~-~fp~~ 166 (426)
...+..++.. .+|++
T Consensus 105 ~~pa~~a~i~~~~~~~ 120 (393)
T PRK11195 105 YSPAKYGILTELLPGE 120 (393)
T ss_pred HHHHHHHHHHHHcCHH
Confidence 9988888876 57764
No 83
>PRK11010 ampG muropeptide transporter; Validated
Probab=95.76 E-value=2.3 Score=44.76 Aligned_cols=135 Identities=11% Similarity=0.008 Sum_probs=67.6
Q ss_pred hHHHHHHhhhhhHHHHHHhchhHhhccccCCCccch--hhHHHHHHHHHHHHHHHHHhhcCCC----cceE--ehhHHHH
Q 014329 38 YIIYFTLGLGFLLPWNAFITAVDYFSYLYPEASVDR--IFAVAYMLVGLFCLVIIVFYAHKSD----AWVR--INVGLGL 109 (426)
Q Consensus 38 y~~f~llGi~~L~pwN~~ita~dyf~~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~~~~~s----~~~R--i~~~l~~ 109 (426)
+..++++|..+-+|+-......+.+.+.. +.+.+. .++ ....+. ....+.-.+.+|.+ -|.| +..+.+.
T Consensus 14 ~~~~~~l~~~~gl~~~~~~~~l~~~l~~~-g~~~~~ig~~~-~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~ 90 (491)
T PRK11010 14 SAILLILGFASGLPLALTSGTLQAWMTVE-NIDLKTIGFFS-LVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLL 90 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHH-HHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHH
Confidence 67788899889999887777665553322 222211 111 111111 23444444555542 1233 2233333
Q ss_pred HHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhcc-CCCHH----HHHHHHhccccccccchh
Q 014329 110 FVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAG-ELPDR----YMQALVAGTAGSALLSAG 184 (426)
Q Consensus 110 ~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~-~fp~~----~~~a~~~G~g~a~~~~~G 184 (426)
..++.+.+.. .+ ....++...+..++.+++.+..+...-++.. .+|++ ..+..+.|..++ .
T Consensus 91 ~~~~~~~~a~-----~~----~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG-----~ 156 (491)
T PRK11010 91 LLVAIAAMGF-----LE----PGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLA-----M 156 (491)
T ss_pred HHHHHHHHHH-----cC----CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHH-----H
Confidence 3333332221 11 1123444555566677777777666666665 46643 244456666666 5
Q ss_pred HHHHH
Q 014329 185 VLVSV 189 (426)
Q Consensus 185 v~~s~ 189 (426)
++...
T Consensus 157 llg~~ 161 (491)
T PRK11010 157 LVSGG 161 (491)
T ss_pred HHHHH
Confidence 55543
No 84
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=95.75 E-value=1.6 Score=45.98 Aligned_cols=83 Identities=12% Similarity=0.087 Sum_probs=57.9
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhh
Q 014329 74 IFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQ 153 (426)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q 153 (426)
.+-.++-...+++++-.-.+.+|+..|.-+..+.++..+..+.+|.... ..|+..+++=++.|++.|..-
T Consensus 77 ~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~----------~~~~~~~~~R~lqGl~~g~~~ 146 (466)
T KOG2532|consen 77 LIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAAS----------IGFYLLLVLRFLQGLGQGVLF 146 (466)
T ss_pred HHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHH----------hcchhhHHHHHHhHHHHhHHH
Confidence 3344555666666666566677777777777788888888888887532 233355677778888888888
Q ss_pred hhhhhhccCCCHH
Q 014329 154 GGLIGAAGELPDR 166 (426)
Q Consensus 154 ~s~~~la~~fp~~ 166 (426)
.++-++.+...|.
T Consensus 147 pa~~~i~~~W~P~ 159 (466)
T KOG2532|consen 147 PAIGSILAKWAPP 159 (466)
T ss_pred hhhhceeeeECCH
Confidence 8888888875543
No 85
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=95.69 E-value=2.3 Score=44.64 Aligned_cols=61 Identities=13% Similarity=0.055 Sum_probs=51.1
Q ss_pred ccchhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHHHH
Q 014329 363 RTEIPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVAWF 423 (426)
Q Consensus 363 ~~d~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s~~ 423 (426)
.+.++.++.++++++..+......+....+..+++.|...-.+..+....|-.+|+.++-.
T Consensus 379 ~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~ 439 (475)
T TIGR00924 379 TSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATF 439 (475)
T ss_pred cCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667788889999999999999888888888888889988888888888888888776543
No 86
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=95.67 E-value=3.2 Score=43.25 Aligned_cols=126 Identities=13% Similarity=0.138 Sum_probs=91.7
Q ss_pred CCchhhhHHHHHHhhhhhHHHHHHhchhHhhccccCCCccchhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHH
Q 014329 32 DTFHLAYIIYFTLGLGFLLPWNAFITAVDYFSYLYPEASVDRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFV 111 (426)
Q Consensus 32 d~~~~~y~~f~llGi~~L~pwN~~ita~dyf~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~ 111 (426)
.|+|.+.+.|-++-..+-+-|+.+-...+|.++.|...+...++++.||+..+...+...++.+|...|.-...+-+.+.
T Consensus 41 ~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Ygs~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~ 120 (480)
T KOG2563|consen 41 PRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYGSSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNG 120 (480)
T ss_pred hhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHH
Confidence 46788889999999999999999999999999999866778899999999999999999999999888888888888877
Q ss_pred HHHHHHhhhhheeecccCCcchhhH--HHHHHHHHhhhhhhhhhhhhhhhcc-----CCCHHH
Q 014329 112 VALLVVPVMDAVYIKGRVGLYDGFT--VTVGAVALSGLADALVQGGLIGAAG-----ELPDRY 167 (426)
Q Consensus 112 v~~i~i~~~~~~~~~~~~~~~~~f~--~~l~~v~~~g~~~~~~q~s~~~la~-----~fp~~~ 167 (426)
+...+=.+... +.....|+ +++..- ..++..|--++++-+ -||++-
T Consensus 121 iGa~Ir~iss~------p~v~~~f~~~l~~~Gq----~iaa~Aq~Fim~lPskiA~~WF~~~q 173 (480)
T KOG2563|consen 121 IGAWIRLISSL------PFVPPLFRRPLTHTGQ----SIAAAAQPFILGLPSKIAAVWFPPDQ 173 (480)
T ss_pred HHHHHhhhccC------ccccccchhhhhHHhH----HHHHHhhhHhhccccHHHHhhCCcch
Confidence 66553211111 10112333 455443 445556666666622 367654
No 87
>PF13347 MFS_2: MFS/sugar transport protein
Probab=95.61 E-value=0.55 Score=48.24 Aligned_cols=106 Identities=10% Similarity=0.081 Sum_probs=69.4
Q ss_pred hhHHHHHHhchhHhhccc-cCCCccchhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeec
Q 014329 48 FLLPWNAFITAVDYFSYL-YPEASVDRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIK 126 (426)
Q Consensus 48 ~L~pwN~~ita~dyf~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~ 126 (426)
..+.++...+...||.+. ..+++....+...+.++.++...+..++.+|+..+.-...+.++.++..+...+...
T Consensus 237 ~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~---- 312 (428)
T PF13347_consen 237 QWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGP---- 312 (428)
T ss_pred HHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHh----
Confidence 345556555555666654 455556667777888888888888888999998777777777777776665433211
Q ss_pred ccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhccCC
Q 014329 127 GRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAGEL 163 (426)
Q Consensus 127 ~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~~f 163 (426)
...+..++..++.|++.+.......++.+..
T Consensus 313 ------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~ 343 (428)
T PF13347_consen 313 ------GSPWLVLILFILAGIGYGAFFVIPWAMLADV 343 (428)
T ss_pred ------hhHHHHHHHHHHhHhhhcccccccccccccc
Confidence 1224455666677777777766666665543
No 88
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=95.56 E-value=3.3 Score=42.40 Aligned_cols=92 Identities=10% Similarity=0.001 Sum_probs=49.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhh
Q 014329 75 FAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQG 154 (426)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~ 154 (426)
....|.+...+.++..-.+.+|+..|.-+..+..+..+..+.... .+ .++..++.-++.|++.+....
T Consensus 56 ~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----a~-------~~~~l~~~r~l~Gi~~~~~~~ 123 (413)
T PRK15403 56 SVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLF-----TT-------SMTQFLIARFIQGTSICFIAT 123 (413)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHH-----cC-------CHHHHHHHHHHHHHHHHHHHH
Confidence 334556666666666666778877665555555555444433221 11 233345556667777776665
Q ss_pred hhhhhcc-CCCHHH----HHHHHhccccc
Q 014329 155 GLIGAAG-ELPDRY----MQALVAGTAGS 178 (426)
Q Consensus 155 s~~~la~-~fp~~~----~~a~~~G~g~a 178 (426)
..+.... .+|++. ++.+..+.+++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (413)
T PRK15403 124 VGYVTVQEAFGQTKGIKLMAIITSIVLVA 152 (413)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 5555443 567543 23344445555
No 89
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=95.52 E-value=1.4 Score=48.10 Aligned_cols=121 Identities=8% Similarity=0.090 Sum_probs=71.3
Q ss_pred hhHhhccccCCCcc-chhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheee-----------
Q 014329 58 AVDYFSYLYPEASV-DRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYI----------- 125 (426)
Q Consensus 58 a~dyf~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~----------- 125 (426)
+.+-.+++|.-++- ...+...|.+.+.+..+....++.|...+.=+..+.+++.+..++..+-++..-
T Consensus 55 ~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~ 134 (633)
T TIGR00805 55 SLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSST 134 (633)
T ss_pred hchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccccc
Confidence 44555666653332 345666888888888888888888877655566777776665554433221100
Q ss_pred ----------c--c--------------cCCc--chhhHHHHHHHHHhhhhhhhhhhhhhhhccC-CCH----HHHHHHH
Q 014329 126 ----------K--G--------------RVGL--YDGFTVTVGAVALSGLADALVQGGLIGAAGE-LPD----RYMQALV 172 (426)
Q Consensus 126 ----------~--~--------------~~~~--~~~f~~~l~~v~~~g~~~~~~q~s~~~la~~-fp~----~~~~a~~ 172 (426)
. + +..+ ...+...++.-++.|++.+.......++... +|+ .+.+.+.
T Consensus 135 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~ 214 (633)
T TIGR00805 135 GNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILE 214 (633)
T ss_pred ccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHH
Confidence 0 0 0000 1134445567778888887777777777664 554 3555566
Q ss_pred hccccc
Q 014329 173 AGTAGS 178 (426)
Q Consensus 173 ~G~g~a 178 (426)
.+..++
T Consensus 215 ~~~~iG 220 (633)
T TIGR00805 215 SIAVFG 220 (633)
T ss_pred HHHHhh
Confidence 666666
No 90
>PRK09848 glucuronide transporter; Provisional
Probab=95.41 E-value=0.53 Score=48.60 Aligned_cols=104 Identities=10% Similarity=0.108 Sum_probs=50.3
Q ss_pred hHHHHHHhchhHhhc-cccCCCccchhh-HHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeec
Q 014329 49 LLPWNAFITAVDYFS-YLYPEASVDRIF-AVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIK 126 (426)
Q Consensus 49 L~pwN~~ita~dyf~-~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~ 126 (426)
...+..+.+...||- +.+..++....+ .....+..++...+..++.+|.+.+.-+..+.++.++..+.+.. .+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~-----~~ 315 (448)
T PRK09848 241 LISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFW-----VS 315 (448)
T ss_pred HHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH-----cC
Confidence 334444444455544 344433222222 22223334445555556777777665566666655554443321 11
Q ss_pred ccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhccC
Q 014329 127 GRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAGE 162 (426)
Q Consensus 127 ~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~~ 162 (426)
. ..++...+...+.|++.+..+....++.+.
T Consensus 316 ----~-~~~~~~~~~~~l~g~G~~~~~~~~~al~~~ 346 (448)
T PRK09848 316 ----V-WSLPVALVALAIASIGQGVTMTVMWALEAD 346 (448)
T ss_pred ----c-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 112333344556677777777766666554
No 91
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=95.35 E-value=0.18 Score=53.06 Aligned_cols=129 Identities=16% Similarity=0.153 Sum_probs=60.7
Q ss_pred chhHhhccc--cCCCccchhhHHHHHHHHHHHHHHHHHhhcC-CCcceEehhHHHHHHHHHHHHhhhhheeecccCCcch
Q 014329 57 TAVDYFSYL--YPEASVDRIFAVAYMLVGLFCLVIIVFYAHK-SDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYD 133 (426)
Q Consensus 57 ta~dyf~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~ 133 (426)
++-+|-++. -.+.++-....-++.+...+.+++.-.+.+| -+.+.=++.|.++.++.-+.-..+ .+.. ++.
T Consensus 56 s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l--~~~~----~~~ 129 (488)
T KOG2325|consen 56 SMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLAL--AYVP----NGV 129 (488)
T ss_pred ecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHH--Hhcc----cch
Confidence 345666652 2222333333333444444444444444433 333444666666666555443222 2222 222
Q ss_pred hhHHHHHHHHHhhhhh-hh-hhhhhhhhccCCCHH--HHHHHHhccccccccchhHHHHHHHHHHHHh
Q 014329 134 GFTVTVGAVALSGLAD-AL-VQGGLIGAAGELPDR--YMQALVAGTAGSALLSAGVLVSVLRILTKAV 197 (426)
Q Consensus 134 ~f~~~l~~v~~~g~~~-~~-~q~s~~~la~~fp~~--~~~a~~~G~g~a~~~~~Gv~~s~l~ii~~~~ 197 (426)
- ++.|+.=++.|++. .. .-=+-.+-++.-++| -..+...|+.++ =+++..++.+..-.
T Consensus 130 ~-y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg-----~ilGp~~q~~f~~L 191 (488)
T KOG2325|consen 130 K-YLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLG-----IILGPTIQLAFTPL 191 (488)
T ss_pred H-HHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHH-----HHHhHHHHHHHhhh
Confidence 3 34566666666662 22 222333444444433 344444455566 66677777765543
No 92
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=95.28 E-value=4 Score=41.56 Aligned_cols=53 Identities=21% Similarity=0.110 Sum_probs=32.0
Q ss_pred HHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHH
Q 014329 368 VTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIV 420 (426)
Q Consensus 368 ~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~ 420 (426)
..+...+++...|-..........+.+++++|..+-.+..+...+|-.+|..+
T Consensus 300 ~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l 352 (400)
T PRK11646 300 LFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIG 352 (400)
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccc
Confidence 34445566665554433333344455667777777777777777777766543
No 93
>PRK15075 citrate-proton symporter; Provisional
Probab=95.13 E-value=4.6 Score=41.47 Aligned_cols=75 Identities=11% Similarity=0.118 Sum_probs=37.3
Q ss_pred HHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcc--hhhHHHHHHHHHhhhhhhhhhhhhhhhcc-C
Q 014329 86 CLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLY--DGFTVTVGAVALSGLADALVQGGLIGAAG-E 162 (426)
Q Consensus 86 ~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~--~~f~~~l~~v~~~g~~~~~~q~s~~~la~-~ 162 (426)
..++.-.+.+|+..|.-+..+..+..+..+..... + +.+.. ......++.-++.|++.+..-.....+.+ .
T Consensus 72 g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~-----~-~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~ 145 (434)
T PRK15075 72 GAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFV-----P-GYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEI 145 (434)
T ss_pred HHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhC-----C-cHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhh
Confidence 34455566788887777777776665555443321 1 00000 00112244455667766654443334444 5
Q ss_pred CCHH
Q 014329 163 LPDR 166 (426)
Q Consensus 163 fp~~ 166 (426)
+|++
T Consensus 146 ~p~~ 149 (434)
T PRK15075 146 ATPG 149 (434)
T ss_pred CCcc
Confidence 7754
No 94
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=94.62 E-value=2.1 Score=44.05 Aligned_cols=108 Identities=14% Similarity=0.075 Sum_probs=61.5
Q ss_pred HHHHHHHhhhhhhhhhhhhh-hcccchhHHHHHH-HHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheee
Q 014329 311 ILIAGYNVFDLVGKSLTAIY-LLENEKVAIGGCF-ARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMI 388 (426)
Q Consensus 311 ~~~~~FnvgD~iGR~~~~~~-~~~~~~~l~~~s~-~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi 388 (426)
....+..+++.+++....+. .+.++|+++..+. +-.+...++.. .++. ..+.+..++.+++.|+..|........
T Consensus 255 ~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~--~~~~-~~~~~~l~l~~~l~g~~~~~~~~~~~~ 331 (418)
T TIGR00889 255 IWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAY--GDPE-YFGYALLFLSMIVYGCAFDFFNISGSV 331 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH--cCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45567778888888775442 2345555433322 22221111111 1111 111233455677888888877777777
Q ss_pred ecCCCCChhhHHHHhHHHH-HHHHHHHHHHHHHH
Q 014329 389 LAPKVVQLQHAETAGIVIV-LFLVLGLAAGSIVA 421 (426)
Q Consensus 389 ~ap~~v~~~ere~ag~~~~-~~l~~Gl~~Gs~~s 421 (426)
+..+..++++|..+-.+.. ....+|..+|..++
T Consensus 332 ~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~ 365 (418)
T TIGR00889 332 FVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILS 365 (418)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 7777788888887777665 45566776666554
No 95
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=94.56 E-value=6.6 Score=41.52 Aligned_cols=145 Identities=13% Similarity=0.073 Sum_probs=70.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhh
Q 014329 73 RIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALV 152 (426)
Q Consensus 73 ~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~ 152 (426)
+....++-+...++++....+.+|...|.-+..+.++.++..+.... +. ....+-..++.=.+.|+.+++.
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~-s~--------~~~~~e~li~GR~i~Gl~~gl~ 133 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGL-SK--------SAPSFEMLILGRLIVGLACGLS 133 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHH-HH--------HhhhHHHHHHHHHHHHHHhHHH
Confidence 34445666667777777666666666553334444433333332211 11 1123344455666777777777
Q ss_pred hhhhhhhccCCCH-HHHHHHHhccccccccchhHHHHHHHHH--HHHhcccCccccchhHHHHHHHHHHHHHHHHHHHHH
Q 014329 153 QGGLIGAAGELPD-RYMQALVAGTAGSALLSAGVLVSVLRIL--TKAVYTQDAIGLRKSANLYFAVGIVVMVICIVFYNV 229 (426)
Q Consensus 153 q~s~~~la~~fp~-~~~~a~~~G~g~a~~~~~Gv~~s~l~ii--~~~~~~~~~~~~~~sa~~yF~i~~~~~~~~~~~~~~ 229 (426)
.+..-=+-+--.| ++=++..+=..++ ..++.++.-. .....++ ...=-+.+....+..++.++...+
T Consensus 134 ~~~~pmyl~E~sP~~~RG~~g~~~~~~-----~~~g~ll~~~~~l~~ilGt-----~~~W~~l~~~~~i~~~~~l~~l~~ 203 (485)
T KOG0569|consen 134 TGLVPMYLTEISPKNLRGALGTLLQIG-----VVIGILLGQVLGLPSLLGT-----EDLWPYLLAFPLIPALLQLALLPF 203 (485)
T ss_pred HHHHHHHHhhcChhhhccHHHHHHHHH-----HHHHHHHHHHHccHHhcCC-----CcchHHHHHHHHHHHHHHHHHHhc
Confidence 7666555554444 4444433333334 3333333311 1112211 121123345555555666666666
Q ss_pred hhcchhh
Q 014329 230 AHRLPVI 236 (426)
Q Consensus 230 l~k~p~~ 236 (426)
++.+|.+
T Consensus 204 ~PESPk~ 210 (485)
T KOG0569|consen 204 LPESPKY 210 (485)
T ss_pred CCCCcch
Confidence 7777765
No 96
>PRK09669 putative symporter YagG; Provisional
Probab=94.41 E-value=7 Score=40.23 Aligned_cols=56 Identities=20% Similarity=0.214 Sum_probs=35.4
Q ss_pred hhHHHHHHHHhhhcchhhhheeeecCCCCChhhHH-------HHhHHHHHHHHHHHHHHHHHH
Q 014329 366 IPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAE-------TAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 366 ~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere-------~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
+..++..+++|+..|-...+.....++.++.+|.+ ......+++..+|..+|..++
T Consensus 320 ~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~ 382 (444)
T PRK09669 320 WLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVV 382 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 34566677888888877766666666666533322 223456666778887777655
No 97
>PRK09669 putative symporter YagG; Provisional
Probab=93.71 E-value=1.9 Score=44.52 Aligned_cols=95 Identities=16% Similarity=0.124 Sum_probs=46.1
Q ss_pred hhHhhcc-ccCCCccchhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhH
Q 014329 58 AVDYFSY-LYPEASVDRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFT 136 (426)
Q Consensus 58 a~dyf~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~ 136 (426)
...||.+ ...+.+....+.....++.++...+..++.+|+..+.....+.+..++....+.. .. + . ..+
T Consensus 251 ~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~-----~~--~-~--~~~ 320 (444)
T PRK09669 251 ATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFF-----IP--P-S--NVW 320 (444)
T ss_pred hhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH-----hC--c-c--hHH
Confidence 3345543 3333333334444555666666656566777765444444444333322221111 11 1 1 223
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhccC
Q 014329 137 VTVGAVALSGLADALVQGGLIGAAGE 162 (426)
Q Consensus 137 ~~l~~v~~~g~~~~~~q~s~~~la~~ 162 (426)
..++..++.|++.+..+....++.+.
T Consensus 321 ~~~~~~~i~g~~~~~~~~~~~am~ad 346 (444)
T PRK09669 321 LIFALNILFNFIQNLTTPLQWSMFSD 346 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33445566777777777777666664
No 98
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=93.55 E-value=1.8 Score=44.11 Aligned_cols=102 Identities=14% Similarity=0.197 Sum_probs=51.8
Q ss_pred HHHHHHhchhHhhccc-cCCCccchhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeeccc
Q 014329 50 LPWNAFITAVDYFSYL-YPEASVDRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGR 128 (426)
Q Consensus 50 ~pwN~~ita~dyf~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~ 128 (426)
..++...+...||.+. +.+.+....+...+.+..++...+..++.+|+..+..+..+.++.++..+.... .+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~-----~~-- 308 (437)
T TIGR00792 236 LAFNIKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFF-----AG-- 308 (437)
T ss_pred HHHHHHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH-----cc--
Confidence 3344443334555432 332222233444556777777777777788877555555555554444433211 11
Q ss_pred CCcchhhHHHHHHHHHhhhhhhhhhhhhhhhccC
Q 014329 129 VGLYDGFTVTVGAVALSGLADALVQGGLIGAAGE 162 (426)
Q Consensus 129 ~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~~ 162 (426)
. ..+...+..++.|++.+..+....++.+.
T Consensus 309 --~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 338 (437)
T TIGR00792 309 --S--NLPLILVLIILAGFGQNFVTGLVWALVAD 338 (437)
T ss_pred --h--hHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 0 12223344555667766666666666553
No 99
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=93.02 E-value=14 Score=39.04 Aligned_cols=58 Identities=12% Similarity=0.079 Sum_probs=49.8
Q ss_pred cchhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 364 TEIPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 364 ~d~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
+.++.+...++.|+..+..+...+..+-+..+++.+..+..+..+...+|-.+|+.++
T Consensus 378 s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~ 435 (489)
T PRK10207 378 SPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVA 435 (489)
T ss_pred CHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3466677888899999999999998888888899999999888888889999988776
No 100
>PRK11462 putative transporter; Provisional
Probab=92.99 E-value=1.2 Score=46.51 Aligned_cols=48 Identities=13% Similarity=-0.031 Sum_probs=26.9
Q ss_pred HHHhchhHhhcccc-CCCccchhhHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014329 53 NAFITAVDYFSYLY-PEASVDRIFAVAYMLVGLFCLVIIVFYAHKSDAW 100 (426)
Q Consensus 53 N~~ita~dyf~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~s~~ 100 (426)
+..-+..-||-..+ .+.+....+...+.+++++...+..++.+|+..+
T Consensus 245 ~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk 293 (460)
T PRK11462 245 CVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKV 293 (460)
T ss_pred HHHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH
Confidence 33334444554433 2222233455567777787777777777776544
No 101
>PTZ00207 hypothetical protein; Provisional
Probab=92.60 E-value=3.1 Score=45.12 Aligned_cols=82 Identities=12% Similarity=0.041 Sum_probs=40.7
Q ss_pred HHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhh-hhhccCCCHH---
Q 014329 91 VFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGL-IGAAGELPDR--- 166 (426)
Q Consensus 91 ~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~-~~la~~fp~~--- 166 (426)
-.+.+|+..|.=+..+.++..+..+...+...-.+ ...++..++.-++.|.+.+....+. ......||++
T Consensus 82 G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i------~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~ 155 (591)
T PTZ00207 82 SFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVI------EGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGA 155 (591)
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccc------cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhHH
Confidence 34556666666566666666665554443210000 1123334444556666666544433 3344467754
Q ss_pred HHHHHHhccccc
Q 014329 167 YMQALVAGTAGS 178 (426)
Q Consensus 167 ~~~a~~~G~g~a 178 (426)
.++....+.|++
T Consensus 156 a~Gi~~~~~gLG 167 (591)
T PTZ00207 156 VVAIMKTFTGLG 167 (591)
T ss_pred HHHHHHHHHHHH
Confidence 344444555555
No 102
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=92.57 E-value=0.87 Score=46.19 Aligned_cols=110 Identities=11% Similarity=0.029 Sum_probs=69.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhh-cccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhhee
Q 014329 309 GIILIAGYNVFDLVGKSLTAIYL-LENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLM 387 (426)
Q Consensus 309 ~~~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~m 387 (426)
.-+....+.++-.+|..+..+.. +..+|+.+....+ ++.-..+.+...+ ...+.+..++..++.|+..|-......
T Consensus 73 ~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~r~l~G~~~~~~~~~~~ 149 (481)
T TIGR00879 73 WGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIAL--LFVIGAILMGLAA-FALSVEMLIVGRVLLGIGVGIASALVP 149 (481)
T ss_pred HHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHH--HHHHHHHHHHHhc-cccchHHHHHHHHHHHhhhhHHHhHHH
Confidence 34556677777777776654433 2445554443332 2211111121101 011223556677888998888877777
Q ss_pred eecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 388 ILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 388 i~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
.+..+..++++|..+..+.......|..+|..++
T Consensus 150 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 150 MYLSEIAPKALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred HHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 7778888889999999999999999999998887
No 103
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=92.03 E-value=4.5 Score=42.31 Aligned_cols=30 Identities=13% Similarity=0.123 Sum_probs=20.4
Q ss_pred HHHHHHhhhhhhhhhhhhhhhccCCCHHHH
Q 014329 139 VGAVALSGLADALVQGGLIGAAGELPDRYM 168 (426)
Q Consensus 139 l~~v~~~g~~~~~~q~s~~~la~~fp~~~~ 168 (426)
.+..++.+++.+..++..+++...++++..
T Consensus 352 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 381 (476)
T PLN00028 352 IVVMILFSIFVQAACGATFGIVPFVSRRSL 381 (476)
T ss_pred HHHHHHHHHHHHHhhhhhcccCcccChhhc
Confidence 344455666666777788888887777754
No 104
>PRK10489 enterobactin exporter EntS; Provisional
Probab=91.78 E-value=12 Score=38.00 Aligned_cols=80 Identities=15% Similarity=0.055 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhh
Q 014329 77 VAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGL 156 (426)
Q Consensus 77 ~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~ 156 (426)
..+.+..++..++..++.+|.+.+..+..+.++..+.++... ..+ ..+...+...+.|++.+..+...
T Consensus 266 ~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~-------~~~~~~~~~~~~g~~~~~~~~~~ 333 (417)
T PRK10489 266 AAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFG-----LMP-------MWILAVLCLALFGYLSAISSLLQ 333 (417)
T ss_pred HHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHH-----ccc-------hHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555666666655555553322223334444333332211 111 12233445666777777766666
Q ss_pred hhhcc-CCCHHHH
Q 014329 157 IGAAG-ELPDRYM 168 (426)
Q Consensus 157 ~~la~-~fp~~~~ 168 (426)
.++.. ..|+++-
T Consensus 334 ~~~~~~~~p~~~~ 346 (417)
T PRK10489 334 YTLLQTQTPDEML 346 (417)
T ss_pred HHHHHhhCCHHHH
Confidence 66654 5787763
No 105
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=91.53 E-value=0.78 Score=45.16 Aligned_cols=57 Identities=26% Similarity=0.169 Sum_probs=42.7
Q ss_pred chhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 365 EIPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 365 d~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
.+.+++-|.++|++.-.++-...-..|..+++|+-..|-.++.--.++|++.-++++
T Consensus 352 ~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iia 408 (459)
T KOG4686|consen 352 FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIA 408 (459)
T ss_pred hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhh
Confidence 355677888899988777665554556678888888888888888888887766553
No 106
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=91.44 E-value=6 Score=39.78 Aligned_cols=79 Identities=10% Similarity=-0.009 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhh
Q 014329 78 AYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLI 157 (426)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~ 157 (426)
...+..++.....-++.+|.+.+.-+..+.+...+..+..+. .+ ..+..+....+-|+.-++...+.+
T Consensus 248 ~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~-----~~-------~~~~~~~~q~l~g~~~~~~~~~~~ 315 (382)
T TIGR00902 248 IGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGA-----IE-------AFPLIFLLQILHCGTFAVCHLAAM 315 (382)
T ss_pred HHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHh-----Hh-------hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355555555555557778888776666666666555544322 11 234455567788888899999999
Q ss_pred hhccCCCHHHH
Q 014329 158 GAAGELPDRYM 168 (426)
Q Consensus 158 ~la~~fp~~~~ 168 (426)
.+....|++..
T Consensus 316 ~~i~~~~~~~~ 326 (382)
T TIGR00902 316 RYIAAQPGSEI 326 (382)
T ss_pred HHHHhCCHhhH
Confidence 98887776553
No 107
>PRK10504 putative transporter; Provisional
Probab=91.32 E-value=4.1 Score=42.07 Aligned_cols=36 Identities=8% Similarity=-0.097 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHH
Q 014329 78 AYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVA 113 (426)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~ 113 (426)
.+.+..+....+..++.+|.+.+.-+..+..+..+.
T Consensus 305 ~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~ 340 (471)
T PRK10504 305 PMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALV 340 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHH
Confidence 344444444455556677776544444444444443
No 108
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=91.25 E-value=3 Score=41.99 Aligned_cols=81 Identities=15% Similarity=0.047 Sum_probs=40.9
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhh
Q 014329 75 FAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQG 154 (426)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~ 154 (426)
....+.+...+..++.-++.+|...+..+..+++...+.+..+.. .+ . .+...+..++.|++.+..++
T Consensus 260 ~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~-----~~----~---~~~~~~~~~~~g~~~~~~~~ 327 (406)
T PRK11551 260 VQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAA-----AP----S---FAGMLLAGFAAGLFVVGGQS 327 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-----cC----c---HHHHHHHHHHHHHHHHhHHH
Confidence 344556666777777667777765443333333333333322211 11 1 11122344556666666666
Q ss_pred hhhhhcc-CCCHHH
Q 014329 155 GLIGAAG-ELPDRY 167 (426)
Q Consensus 155 s~~~la~-~fp~~~ 167 (426)
..++++. .+|++.
T Consensus 328 ~~~~~~~~~~p~~~ 341 (406)
T PRK11551 328 VLYALAPLFYPTQV 341 (406)
T ss_pred HHHHHHHHHcchhh
Confidence 6666655 467665
No 109
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=91.24 E-value=22 Score=37.51 Aligned_cols=103 Identities=16% Similarity=0.104 Sum_probs=57.1
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhc-ccch--hHHHHHHHHHHHHhhhhcc--ccCCCccccchhHHHHHHHHhhhcchhh
Q 014329 309 GIILIAGYNVFDLVGKSLTAIYLL-ENEK--VAIGGCFARLLFFPLFLGC--LHGPKFFRTEIPVTLLTCLLGLTNGYLT 383 (426)
Q Consensus 309 ~~~~~~~FnvgD~iGR~~~~~~~~-~~~~--~l~~~s~~R~~fiPlf~~c--~~~p~~~~~d~~~~il~~lfglTnGyl~ 383 (426)
..+...+=|+.-.+|-.+..+... .++| +.+..+++=...+|+.-+- ..++--+++.+.++++.++.|+..|-..
T Consensus 319 l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~q 398 (477)
T PF11700_consen 319 LIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQ 398 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHH
Confidence 345555667777777666544332 3333 5555554444455554321 1111116677888899999999999877
Q ss_pred hheeeecCCCCChhhHHHHhHHHHHHHHHHH
Q 014329 384 SVLMILAPKVVQLQHAETAGIVIVLFLVLGL 414 (426)
Q Consensus 384 t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl 414 (426)
+.+=..-.+.+|+ +|| +.+.+++-..|-
T Consensus 399 s~sRs~~~~LiP~-g~e--~efFgly~i~gk 426 (477)
T PF11700_consen 399 SASRSLFSRLIPP-GRE--AEFFGLYAITGK 426 (477)
T ss_pred HHHHHHHHHhCCC-chh--hHHHHHHHHHHH
Confidence 7554443343333 344 555555555554
No 110
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=90.35 E-value=1.3 Score=42.81 Aligned_cols=108 Identities=15% Similarity=0.063 Sum_probs=72.2
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhh-cccchh-HHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhhe
Q 014329 309 GIILIAGYNVFDLVGKSLTAIYL-LENEKV-AIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVL 386 (426)
Q Consensus 309 ~~~~~~~FnvgD~iGR~~~~~~~-~~~~~~-l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~ 386 (426)
.-.....+.+++.+++....+.. +.++|+ +.+..+...+...+...+ ++.+..++..++.|+..|......
T Consensus 36 ~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~g~~~~~~~~~~ 108 (352)
T cd06174 36 AGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFA-------SSLWLLLVGRFLLGLGGGALYPAA 108 (352)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHh-------ccHHHHHHHHHHHHcccccccHhH
Confidence 44556777888888877754432 234444 344444444333222221 233556777788899888888887
Q ss_pred eeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHHHH
Q 014329 387 MILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVAWF 423 (426)
Q Consensus 387 mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s~~ 423 (426)
..+.++..++|||..+..+......+|..+|..++-.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 145 (352)
T cd06174 109 AALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGL 145 (352)
T ss_pred HHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 7888888888899999999888888888888776643
No 111
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=90.12 E-value=1.8 Score=42.98 Aligned_cols=34 Identities=12% Similarity=0.128 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHH
Q 014329 77 VAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLF 110 (426)
Q Consensus 77 ~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~ 110 (426)
..+.+...+......++.+|...+..+..+..+.
T Consensus 237 ~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~ 270 (377)
T PRK11102 237 ALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQ 270 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 3455556666666667777776554444455443
No 112
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=90.10 E-value=29 Score=36.89 Aligned_cols=119 Identities=14% Similarity=-0.040 Sum_probs=62.7
Q ss_pred hhHhhccccC--CCccchhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhh
Q 014329 58 AVDYFSYLYP--EASVDRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGF 135 (426)
Q Consensus 58 a~dyf~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f 135 (426)
+.+|+.+.+. +++..+...-++.....+.++..-.+.+|+.+|.=+..+.+...+..++.+.. ..+
T Consensus 48 a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa------------~Sl 115 (511)
T TIGR00806 48 ITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLG------------TSV 115 (511)
T ss_pred HHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH------------HHH
Confidence 3456665432 23322223334444444455555555666666665555555555544443321 134
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhccCCCHHH----HHHHHhccccccccchhHHHHHHHHH
Q 014329 136 TVTVGAVALSGLADALVQGGLIGAAGELPDRY----MQALVAGTAGSALLSAGVLVSVLRIL 193 (426)
Q Consensus 136 ~~~l~~v~~~g~~~~~~q~s~~~la~~fp~~~----~~a~~~G~g~a~~~~~Gv~~s~l~ii 193 (426)
....+.=++.|++.|..-+..--++..+|++. ++-+.+|+.++ ++++.++.-.
T Consensus 116 ~~L~i~R~llGvaEA~~~A~~syI~~WfP~kER~ratsi~~sg~~vG-----~~Ia~~L~ql 172 (511)
T TIGR00806 116 WHMQLMEVFYSVTMAARIAYSSYIFSLVPPSRYQRAAAYSRAAVLLG-----VFLSSVLGQL 172 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH-----HHHHHHHHHH
Confidence 44555667788887776644444555799753 44456666666 6665554444
No 113
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=89.82 E-value=5.4 Score=41.44 Aligned_cols=30 Identities=17% Similarity=-0.061 Sum_probs=18.4
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhcc-CCCHHH
Q 014329 138 TVGAVALSGLADALVQGGLIGAAG-ELPDRY 167 (426)
Q Consensus 138 ~l~~v~~~g~~~~~~q~s~~~la~-~fp~~~ 167 (426)
..+..++.|++.+......+++.. ..|++.
T Consensus 336 ~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~ 366 (455)
T TIGR00892 336 LVIYCIFFGLSFGSVGALLFEVLMDLVGAQR 366 (455)
T ss_pred HHHHHHHHHHHhchHHHHHHHHHHHHhhHHH
Confidence 344556667777766666666655 456654
No 114
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=89.71 E-value=30 Score=36.54 Aligned_cols=58 Identities=7% Similarity=-0.122 Sum_probs=41.9
Q ss_pred ccchhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHH
Q 014329 363 RTEIPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIV 420 (426)
Q Consensus 363 ~~d~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~ 420 (426)
-|.++.+...+++|+..+.+.-..+....+..+++.|..+-.+..+....|-..|+.+
T Consensus 380 vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~ 437 (500)
T PRK09584 380 VSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYV 437 (500)
T ss_pred cCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3446778888899999999988888877777777777777666655555555555444
No 115
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=89.57 E-value=29 Score=36.25 Aligned_cols=56 Identities=9% Similarity=0.074 Sum_probs=34.9
Q ss_pred hhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 366 IPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 366 ~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
++.....++-++..|......+.+..+.++++++...-.+.+...++|-.+|+.++
T Consensus 352 ~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~g 407 (468)
T TIGR00788 352 VFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLG 407 (468)
T ss_pred eeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHH
Confidence 34555667778888877776666766767665555444444444466666666544
No 116
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=89.52 E-value=27 Score=35.84 Aligned_cols=50 Identities=26% Similarity=0.254 Sum_probs=38.4
Q ss_pred HHHHhhhcchhhhheeeecCCCCChhhHHHHhH-HHHHHHHHHHHHHHHHH
Q 014329 372 TCLLGLTNGYLTSVLMILAPKVVQLQHAETAGI-VIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 372 ~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~-~~~~~l~~Gl~~Gs~~s 421 (426)
+.+.|+|-|..-..++.|..+.+++|.|..+=. ...+...+|..+|+.++
T Consensus 308 q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~ig 358 (400)
T PF03825_consen 308 QLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIG 358 (400)
T ss_pred HhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHH
Confidence 346899999999999999999888887766644 45556677888877654
No 117
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=89.13 E-value=1.2 Score=45.34 Aligned_cols=141 Identities=13% Similarity=0.002 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHhhhhccccceeeecccccCCCchHHHHHHHHHHhhhhhhhhhhhh-hhcccchhHH-HHHHHHHHHHhh
Q 014329 274 KWYGFGILLIYIVTLSIFPGYITEDVHSEILKDWYGIILIAGYNVFDLVGKSLTAI-YLLENEKVAI-GGCFARLLFFPL 351 (426)
Q Consensus 274 ~~~~l~~fl~f~vTl~vFP~i~~~~~~~~~~~~w~~~~~~~~FnvgD~iGR~~~~~-~~~~~~~~l~-~~s~~R~~fiPl 351 (426)
+......++..+....++|-+...-.+....+....-....++++++.+.+..... ..+.++|+.+ +..++..+...+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~ 92 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFAT 92 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 45556666666666666766421111111122333334455666666555444322 2223445543 333333222211
Q ss_pred hhccccCCCccccchhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 352 FLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 352 f~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
+.. .++.+..++..++.|+.+|..........++..++|+|..+..+......+|..+|..++
T Consensus 93 ---~~~----~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~ 155 (400)
T PRK11646 93 ---MAI----AHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLG 155 (400)
T ss_pred ---HHH----hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 123345666777888888877665555556777788888888888888888887776654
No 118
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=88.97 E-value=8.6 Score=39.52 Aligned_cols=140 Identities=12% Similarity=0.072 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhh
Q 014329 79 YMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIG 158 (426)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~ 158 (426)
-+++.+...+...++.+|++.+.-+..+.+..++=...... .. + +......+.+....+-|+.=+....+...
T Consensus 252 ~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~-----~~-~-~~~~~~~~~~l~q~lhG~tf~~~~~a~~~ 324 (400)
T PF03825_consen 252 GVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAY-----FS-D-PWPFIVALQLLGQLLHGLTFGLFHAASVR 324 (400)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH-----hc-C-CcHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 34556666666677888887766555555555443332221 11 1 11111222222234456666666666666
Q ss_pred hcc-CCCHHH---HHHHHhc--cccccccchhHHHHHHHHHHHHhcccCccccchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 014329 159 AAG-ELPDRY---MQALVAG--TAGSALLSAGVLVSVLRILTKAVYTQDAIGLRKSANLYFAVGIVVMVICIVFYNVAHR 232 (426)
Q Consensus 159 la~-~fp~~~---~~a~~~G--~g~a~~~~~Gv~~s~l~ii~~~~~~~~~~~~~~sa~~yF~i~~~~~~~~~~~~~~l~k 232 (426)
+.. ..|++. .|++..+ .|++ +.+.+++.=...-..+. ++ ......++.+.+++.++..+.+..+-|
T Consensus 325 yi~~~~p~~~~at~Q~l~~~~~~Glg-----~~iG~~igG~l~~~~g~--~~-~~~~~~~~~v~a~~~~~~~~~f~~~fk 396 (400)
T PF03825_consen 325 YIDRIAPPELRATAQGLYSALSFGLG-----GAIGSLIGGWLYDAFGA--RG-MFDWSAVFLVFAVMALVILVLFVILFK 396 (400)
T ss_pred HHHHhCCccchHHHHHHHHHHHhhHH-----HHHHHHHHHHHHHHhcc--hh-hhhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 665 577765 3554433 4555 66655544332222211 11 122345567777777777766766655
Q ss_pred c
Q 014329 233 L 233 (426)
Q Consensus 233 ~ 233 (426)
.
T Consensus 397 ~ 397 (400)
T PF03825_consen 397 P 397 (400)
T ss_pred C
Confidence 4
No 119
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=88.92 E-value=30 Score=35.42 Aligned_cols=88 Identities=13% Similarity=0.015 Sum_probs=45.1
Q ss_pred HHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCc--chhhHHHHHHHHHhhhhhhhhhhhhhhhcc-
Q 014329 85 FCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGL--YDGFTVTVGAVALSGLADALVQGGLIGAAG- 161 (426)
Q Consensus 85 ~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~--~~~f~~~l~~v~~~g~~~~~~q~s~~~la~- 161 (426)
++.++.-.+.+|+..|.=+..+.++..+..+...+. ++ ..+ .......++.=++.|++.|....+...+.+
T Consensus 78 ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e 151 (432)
T PRK10406 78 IGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACL-----PG-YETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSE 151 (432)
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhc-----CC-chhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHH
Confidence 444444456777765555556666555544433221 10 000 011223444556778887777777777766
Q ss_pred CCCHH----HHHHHHhccccc
Q 014329 162 ELPDR----YMQALVAGTAGS 178 (426)
Q Consensus 162 ~fp~~----~~~a~~~G~g~a 178 (426)
.+|++ +......|+..+
T Consensus 152 ~~p~~~rg~~~~~~~~~~~~G 172 (432)
T PRK10406 152 VAVEGRKGFYASFQYVTLIGG 172 (432)
T ss_pred hCCCCcccHHHHHHHHHHHHH
Confidence 45654 334444455444
No 120
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=87.70 E-value=5.1 Score=40.65 Aligned_cols=105 Identities=12% Similarity=0.021 Sum_probs=64.8
Q ss_pred HHHHHHHhhhhhhhhhhhhhh-cccchhHHH-HHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheee
Q 014329 311 ILIAGYNVFDLVGKSLTAIYL-LENEKVAIG-GCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMI 388 (426)
Q Consensus 311 ~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~-~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi 388 (426)
.....+.++-.+|+....... +.++|+.+. ..++..+ ..+.+. +.++.+..++.-++.|+.+|-.......
T Consensus 59 ~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~---~~~~~~----~~~~~~~l~~~r~l~G~~~g~~~~~~~~ 131 (394)
T PRK10213 59 QSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTL---SCLLVS----FANSFSLLLIGRACLGLALGGFWAMSAS 131 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHH---HHHHHH----HHChHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 344566777777777654322 345555433 2232222 222222 1233455667778899999887777777
Q ss_pred ecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHHH
Q 014329 389 LAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVAW 422 (426)
Q Consensus 389 ~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s~ 422 (426)
..++..++++|..+-.+.....++|..+|..++-
T Consensus 132 ~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~ 165 (394)
T PRK10213 132 LTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGS 165 (394)
T ss_pred HHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788888888888877777777777776666553
No 121
>TIGR00898 2A0119 cation transport protein.
Probab=87.58 E-value=3 Score=43.55 Aligned_cols=112 Identities=17% Similarity=0.139 Sum_probs=76.1
Q ss_pred chHHHHHHHHHHhhhhhhhhhhhhhh-cccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhh
Q 014329 306 DWYGIILIAGYNVFDLVGKSLTAIYL-LENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTS 384 (426)
Q Consensus 306 ~w~~~~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t 384 (426)
++..-+...+|.+|-.+|..+..+.. +..+|+.++.+. ++.....+.+.. -++.+..++..++.|+..|-...
T Consensus 126 ~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~--~~~~i~~~~~~~----~~~~~~~~~~r~l~G~~~~~~~~ 199 (505)
T TIGR00898 126 AWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLST--LVTAVSGVLTAF----SPNYTVFLVFRLLVGMGIGGIWV 199 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHH--HHHHHHHHHHHH----cccHHHHHHHHHHHHhhccchHH
Confidence 44455677888888888887765433 244555443332 111111111111 22335567778889999999888
Q ss_pred heeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHHHH
Q 014329 385 VLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVAWF 423 (426)
Q Consensus 385 ~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s~~ 423 (426)
....+..+..++++|..++.+.......|..+|..++..
T Consensus 200 ~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 238 (505)
T TIGR00898 200 QAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYF 238 (505)
T ss_pred HHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888999999999999999888889998888877654
No 122
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=87.44 E-value=2.6 Score=41.08 Aligned_cols=112 Identities=12% Similarity=0.025 Sum_probs=69.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhhh-hcccchhHHHH-HHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhhe
Q 014329 309 GIILIAGYNVFDLVGKSLTAIY-LLENEKVAIGG-CFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVL 386 (426)
Q Consensus 309 ~~~~~~~FnvgD~iGR~~~~~~-~~~~~~~l~~~-s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~ 386 (426)
.-+...++.++..++.....+. .+.++|+.+.. .++..+..-+.......+. .+.+..++..++.|+.+|......
T Consensus 36 ~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~~~~~~~~~~ 113 (365)
T TIGR00900 36 LSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGG--LNIWQVYVLAGILAIAQAFFTPAY 113 (365)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455667777777776664332 23455554433 3333222211111111110 233556677778899999888877
Q ss_pred eeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHHH
Q 014329 387 MILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVAW 422 (426)
Q Consensus 387 mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s~ 422 (426)
..+.++..+++||..+-.+......+|..+|..++-
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~ 149 (365)
T TIGR00900 114 QAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGG 149 (365)
T ss_pred HHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 788888888899999988888888888888876654
No 123
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=87.44 E-value=34 Score=35.40 Aligned_cols=54 Identities=6% Similarity=-0.111 Sum_probs=27.0
Q ss_pred hhhHHHHHHhc-hhHhhccccCCCccc-hhhHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014329 47 GFLLPWNAFIT-AVDYFSYLYPEASVD-RIFAVAYMLVGLFCLVIIVFYAHKSDAW 100 (426)
Q Consensus 47 ~~L~pwN~~it-a~dyf~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~s~~ 100 (426)
....+++.+.+ ...|+++.+.-+..+ ........+...+..++.-.+.+|+..+
T Consensus 269 ~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r 324 (467)
T PRK09556 269 FLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGR 324 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 33444444444 345776654322222 2333445556666666666666666544
No 124
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=87.23 E-value=3.8 Score=42.19 Aligned_cols=91 Identities=13% Similarity=0.182 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHHHHH---HhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhh
Q 014329 76 AVAYMLVGLFCLVIIV---FYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALV 152 (426)
Q Consensus 76 ~~~~~~~~l~~~l~~~---~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~ 152 (426)
.+.+-.-.++-.+++. .+..|+.++.-+..|+.++..+.++..+. + .|...++.=.+.|++++..
T Consensus 109 G~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg-----~-------sy~~l~vAR~LQgvgsA~~ 176 (464)
T KOG3764|consen 109 GLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFG-----N-------SYPMLFVARSLQGVGSAFA 176 (464)
T ss_pred hHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHc-----c-------hhHHHHHHHHHhhhhHHHH
Confidence 3333333344444444 34568888888889998888777655331 1 4455667778899999999
Q ss_pred hhhhhhhcc-CCCHHHHHHHHhccccc
Q 014329 153 QGGLIGAAG-ELPDRYMQALVAGTAGS 178 (426)
Q Consensus 153 q~s~~~la~-~fp~~~~~a~~~G~g~a 178 (426)
..+.+|+.+ .||++--.+-..|...+
T Consensus 177 ~tsglamlAd~f~~d~er~~vmGialg 203 (464)
T KOG3764|consen 177 DTSGLAMLADVFPEDNERGSVMGIALG 203 (464)
T ss_pred HhhhHHHHHHHcccchhhhHHHHHHHH
Confidence 999999877 69987754444444433
No 125
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=87.22 E-value=7.4 Score=40.19 Aligned_cols=29 Identities=10% Similarity=0.173 Sum_probs=15.8
Q ss_pred HHHHHHhhhhhHHHHHHhch-hHhhccccC
Q 014329 39 IIYFTLGLGFLLPWNAFITA-VDYFSYLYP 67 (426)
Q Consensus 39 ~~f~llGi~~L~pwN~~ita-~dyf~~~~~ 67 (426)
+...+...+....++.+.+- ..|+++.+.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g 293 (465)
T TIGR00894 264 WAIWFAIFGHFWLYTILPTYLPTFISWVLR 293 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 44444445555566665553 467666443
No 126
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=86.77 E-value=2 Score=45.32 Aligned_cols=146 Identities=12% Similarity=0.111 Sum_probs=80.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhh-HHHHHHHHHhhhhhhh
Q 014329 73 RIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGF-TVTVGAVALSGLADAL 151 (426)
Q Consensus 73 ~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f-~~~l~~v~~~g~~~~~ 151 (426)
.+.+......++...++..++.+|...|.-...++.+..+..+++.+... +....+....| .+...+..+.+++.|.
T Consensus 308 ~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~--l~~~~~~~~~y~~i~~~~~~~~~f~~G~ 385 (485)
T KOG0569|consen 308 QYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALF--LSNSFGSWLSYLCIAAIFLFIISFAIGP 385 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHH--HHHHhhhHHHHHHHHHHHHHHHhhhcCC
Confidence 45666778888888888889999999888888888888776665544322 11111111122 1233344445555555
Q ss_pred hhhhhhhhccCCCHHHHHHHHhccccccccchhHHHHHHHHHHHHhcccCccccchhHHHHHHHHHHHHHHHHHHHHHh
Q 014329 152 VQGGLIGAAGELPDRYMQALVAGTAGSALLSAGVLVSVLRILTKAVYTQDAIGLRKSANLYFAVGIVVMVICIVFYNVA 230 (426)
Q Consensus 152 ~q~s~~~la~~fp~~~~~a~~~G~g~a~~~~~Gv~~s~l~ii~~~~~~~~~~~~~~sa~~yF~i~~~~~~~~~~~~~~l 230 (426)
.--..+=.+=++|++.-.+. |+++ +....+.++++...+|.-. ...+.+.|+..++...+..+..|.++
T Consensus 386 gpi~~fi~aELf~~~~R~aa---~s~~-----~~~~w~~~fiv~~~fp~l~--~~~g~~~filF~i~~~~~~i~~~~~l 454 (485)
T KOG0569|consen 386 GPIPWFIGAELFPQSARSAA---QSVA-----TAVNWLSNFIVGFAFPPLQ--NVIGPYVFILFVIPLAIFLIYLYRYL 454 (485)
T ss_pred CchhHHHHHHhCCccchHHH---HHHH-----HHHHHHHHHHHHHHHHHHH--HHhcchhhHHHHHHHHHHHHHHHHhC
Confidence 55555555557787654332 2344 5556777777666655311 12333444444444333334444444
No 127
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=86.52 E-value=5.8 Score=39.37 Aligned_cols=106 Identities=12% Similarity=0.071 Sum_probs=64.2
Q ss_pred HHHHHHHhhhhhhhhhhhhhh-cccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeee
Q 014329 311 ILIAGYNVFDLVGKSLTAIYL-LENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMIL 389 (426)
Q Consensus 311 ~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ 389 (426)
....++.+++.+|..+..+.. +..+|+.+.... ++..-..+.+.. .++.+...+..++.|+..|-.......+
T Consensus 51 ~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~--~~~~~~~~~~~~----~~~~~~l~~~~~l~G~~~~~~~~~~~~~ 124 (405)
T TIGR00891 51 SLISAALISRWFGALMFGLWGDRYGRRLPMVTSI--VLFSAGTLACGF----APGYITMFIARLVIGIGMGGEYGSSAAY 124 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH--HHHHHHHHHHHH----hccHHHHHHHHHHHHhhhhhhhHHHHHH
Confidence 445667777777766654332 345555443322 111111111111 1233445666778888887776666777
Q ss_pred cCCCCChhhHHHHhHHHHHHHHHHHHHHHHHHH
Q 014329 390 APKVVQLQHAETAGIVIVLFLVLGLAAGSIVAW 422 (426)
Q Consensus 390 ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s~ 422 (426)
..+..++++|..+..+.......|..+|..++-
T Consensus 125 i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~ 157 (405)
T TIGR00891 125 VIESWPKHLRNKASGLLISGYAVGAVVAAQVYS 157 (405)
T ss_pred HHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 777888889998888888888888877776653
No 128
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=86.13 E-value=13 Score=38.20 Aligned_cols=83 Identities=12% Similarity=0.085 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhh
Q 014329 77 VAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGL 156 (426)
Q Consensus 77 ~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~ 156 (426)
...++...+..+..-++.+|++.|.-+..++++..+....... .+ +....++...+..++.|++.+......
T Consensus 258 ~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~-----~~---~~~~~~~~l~l~~~l~g~~~~~~~~~~ 329 (418)
T TIGR00889 258 SLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAY-----GD---PEYFGYALLFLSMIVYGCAFDFFNISG 329 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH-----cC---cchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455566666666667777877666555666555554433221 11 011123334445667777777777666
Q ss_pred hhhc-cCCCHHH
Q 014329 157 IGAA-GELPDRY 167 (426)
Q Consensus 157 ~~la-~~fp~~~ 167 (426)
..+. ..+|++.
T Consensus 330 ~~~i~~~~p~~~ 341 (418)
T TIGR00889 330 SVFVEKEVPVHI 341 (418)
T ss_pred HHHHHHHCCHHH
Confidence 6654 4688764
No 129
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=85.87 E-value=19 Score=36.04 Aligned_cols=77 Identities=6% Similarity=-0.122 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhh
Q 014329 79 YMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIG 158 (426)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~ 158 (426)
..+..+......-++.+|.+.+.-+..+++...+..+.... .+ ..+..++..++.|++.++.......
T Consensus 249 ~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~-----~~-------~~~~~~~~~~l~g~~~~~~~~~~~~ 316 (382)
T PRK11128 249 GVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGS-----TT-------ALPWLIVIQILHCGTFTVCHLAAMR 316 (382)
T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHh-----hh-------hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444455556677766555555666555554433211 11 2233445666778888888888888
Q ss_pred hccCCCHHH
Q 014329 159 AAGELPDRY 167 (426)
Q Consensus 159 la~~fp~~~ 167 (426)
+....+++.
T Consensus 317 ~~~~~~~~~ 325 (382)
T PRK11128 317 YIAARPGSE 325 (382)
T ss_pred HHHHCCHhh
Confidence 776666554
No 130
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=85.79 E-value=50 Score=34.74 Aligned_cols=115 Identities=10% Similarity=0.105 Sum_probs=53.1
Q ss_pred HHHHhhhhhHHHHHHhchhHhhcc-cc--CCCccchhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHH
Q 014329 41 YFTLGLGFLLPWNAFITAVDYFSY-LY--PEASVDRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVV 117 (426)
Q Consensus 41 f~llGi~~L~pwN~~ita~dyf~~-~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i 117 (426)
-+.++...-..|+.... ...+ .+ ...+.. .+...+.+..-+..+..-.+.+|+..|.-+..+..+..+..+..
T Consensus 42 ~f~~~F~~w~~~~~l~~---~~~~~~~~ls~~q~g-~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~ 117 (462)
T PRK15034 42 CLLLAFCVWMLFSAVTV---NLNKIGFNFTTDQLF-LLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWL 117 (462)
T ss_pred HHHHHHHHHHHHHHHHH---HhhhhhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 35666655555555433 2222 12 222221 12222333333444444556677665544444444443333322
Q ss_pred hhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhccCCCHH
Q 014329 118 PVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAGELPDR 166 (426)
Q Consensus 118 ~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~~fp~~ 166 (426)
... .+ + ....|...+++-++.|++.+..-++.-.+...||++
T Consensus 118 ~~a----~~-~--~~~s~~~lli~r~l~Gigg~~f~~~~~~vs~wfp~~ 159 (462)
T PRK15034 118 GIA----VQ-N--PNTPFGIFIVIALLCGFAGANFASSMGNISFFFPKA 159 (462)
T ss_pred HHH----Hc-c--cCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHCCHh
Confidence 221 00 0 112455666777778877554444444444468876
No 131
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=85.69 E-value=4.9 Score=39.75 Aligned_cols=105 Identities=10% Similarity=0.021 Sum_probs=63.0
Q ss_pred HHHHHHHhhhhhhhhhhhhhh-cccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeee
Q 014329 311 ILIAGYNVFDLVGKSLTAIYL-LENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMIL 389 (426)
Q Consensus 311 ~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ 389 (426)
.....+.++..+|..+..+.. +.++|+.+.... ++.....+.+.. .++.+..++..++.|+..|...+.....
T Consensus 44 ~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 117 (385)
T TIGR00710 44 MTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGL--FIFALSSLGLAL----SNNIETLLVLRFVQAFGASAGSVISQAL 117 (385)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHH--HHHHHHHHHHHH----HccHHHHHHHHHHHHcchhHHHHHHHHH
Confidence 455677777777776654322 334555433221 111111111111 1233455667778888888877777777
Q ss_pred cCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 390 APKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 390 ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
.++..++++|..+-.+......+|..+|..++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 149 (385)
T TIGR00710 118 VRDIYPGEELSRIYSILMPVLALAPAVAPLLG 149 (385)
T ss_pred HHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777888888887777777777777776655
No 132
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=85.52 E-value=53 Score=34.73 Aligned_cols=53 Identities=17% Similarity=0.077 Sum_probs=32.6
Q ss_pred hhHHHHHHHHhhhcchhhhheeeecCCCCCh--hhHHHHhHHHHHHHHHHHHHHH
Q 014329 366 IPVTLLTCLLGLTNGYLTSVLMILAPKVVQL--QHAETAGIVIVLFLVLGLAAGS 418 (426)
Q Consensus 366 ~~~~il~~lfglTnGyl~t~~mi~ap~~v~~--~ere~ag~~~~~~l~~Gl~~Gs 418 (426)
+..++++.++|++-.=..++.+....+.+++ +.+...-.+.+.++.+.=.+-+
T Consensus 381 ~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~s 435 (477)
T TIGR01301 381 ASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVS 435 (477)
T ss_pred HHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHH
Confidence 4556777888888777777777665555553 3334555566666665444433
No 133
>TIGR00895 2A0115 benzoate transport.
Probab=84.90 E-value=7 Score=38.55 Aligned_cols=106 Identities=13% Similarity=-0.019 Sum_probs=53.0
Q ss_pred HHHHHhchhHhhccccCCCc-cchhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccC
Q 014329 51 PWNAFITAVDYFSYLYPEAS-VDRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRV 129 (426)
Q Consensus 51 pwN~~ita~dyf~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~ 129 (426)
.++...+-.+|+.+.+..+. ....+...+.+..++..++..++.+|.+.+ ++.....+..+....+. . ..+
T Consensus 265 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~---~-~~~--- 336 (398)
T TIGR00895 265 GVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR-VTALLLLLGAVFAVLVG---S-TLF--- 336 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH-HHHHHHHHHHHHHHHHH---H-Hhh---
Confidence 34444333345554443222 223344555666677777777778887755 43333332222222111 1 011
Q ss_pred CcchhhHHHHHHHHHhhhhhhhhhhhhhhhcc-CCCHHHH
Q 014329 130 GLYDGFTVTVGAVALSGLADALVQGGLIGAAG-ELPDRYM 168 (426)
Q Consensus 130 ~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~-~fp~~~~ 168 (426)
. ........++.|++.+..+....++.+ .+|++..
T Consensus 337 -~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 372 (398)
T TIGR00895 337 -S---PTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIR 372 (398)
T ss_pred -C---HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHH
Confidence 1 122334556677777777777777666 4677654
No 134
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=84.82 E-value=4.5 Score=39.83 Aligned_cols=105 Identities=14% Similarity=0.018 Sum_probs=57.2
Q ss_pred HHHHHHHhhhhhhhhhhhhhh-cccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeee
Q 014329 311 ILIAGYNVFDLVGKSLTAIYL-LENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMIL 389 (426)
Q Consensus 311 ~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ 389 (426)
.....+.+++.++.....+.. +..+|+.+.... ++.....+.+...+. +.+..++..++.|+.+|... .+..+
T Consensus 41 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~--~~~~i~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~-~~~~~ 114 (366)
T TIGR00886 41 NLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSL--LLLAIPCLWAGLAVQ---SYSVLLLLRLFIGIAGGSFA-SCMPW 114 (366)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH--HHHHHHHHHHHHHhh---hHHHHHHHHHHHHHhchhhH-hHHHH
Confidence 456677777877776654433 234454433222 111111111111110 33455667777888877543 34445
Q ss_pred cCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 390 APKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 390 ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
..+..+++||..+..+...+...|..+|..++
T Consensus 115 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~ 146 (366)
T TIGR00886 115 ISFFFPKKIQGTALGLAAGWGNMGGGVAQFVM 146 (366)
T ss_pred HHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHH
Confidence 55666778888887777766666666655543
No 135
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=84.65 E-value=32 Score=36.27 Aligned_cols=128 Identities=15% Similarity=0.160 Sum_probs=64.3
Q ss_pred HHHHHhchhHhhccc-cCCCccch-hhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeeccc
Q 014329 51 PWNAFITAVDYFSYL-YPEASVDR-IFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGR 128 (426)
Q Consensus 51 pwN~~ita~dyf~~~-~~~~~~~~-~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~ 128 (426)
..|..-+..-||-+. ..+++... ....++....+.+.....++.+|+..|.-...+.++.++.-..+ .+.+
T Consensus 251 ~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~-----~f~~-- 323 (467)
T COG2211 251 AFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLL-----YFTP-- 323 (467)
T ss_pred HHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHH-----Hhhc--
Confidence 456666666777654 34444444 34455556666657777788888775555555555444433322 1121
Q ss_pred CCcchhhHHHHHHHHHhhhhhhhhhhhhhhhccCCCHHHHHHHHhccccccccchhHHHHHHHHHHH
Q 014329 129 VGLYDGFTVTVGAVALSGLADALVQGGLIGAAGELPDRYMQALVAGTAGSALLSAGVLVSVLRILTK 195 (426)
Q Consensus 129 ~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~~fp~~~~~a~~~G~g~a~~~~~Gv~~s~l~ii~~ 195 (426)
.. ..++.++..++.+++.+....-.-++.+--++ ..-+-+|.=.. |+.-+.....-|
T Consensus 324 -~~--~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vD--yge~~TG~R~e-----Gi~~s~~tF~~K 380 (467)
T COG2211 324 -AG--SVVLIVVALIIAGVGTGIANPLPWAMVADTVD--YGEWKTGVRRE-----GIVYSGMTFFRK 380 (467)
T ss_pred -Cc--chHHHHHHHHHHHHHhhccccccHHHhcchhh--HHHHHhCCCch-----hhHHHHHHHHHH
Confidence 12 22233344445555555544444444333221 12344566666 665555444444
No 136
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=84.41 E-value=2.8 Score=34.28 Aligned_cols=57 Identities=12% Similarity=0.069 Sum_probs=44.7
Q ss_pred hhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHHH
Q 014329 366 IPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVAW 422 (426)
Q Consensus 366 ~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s~ 422 (426)
+...+..++.|+..|........+.++..++++|..+..+.......|..+|..++-
T Consensus 52 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 108 (141)
T TIGR00880 52 TVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGG 108 (141)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHH
Confidence 455677888999999888877778888888888888888888777788777766543
No 137
>PRK09528 lacY galactoside permease; Reviewed
Probab=84.31 E-value=26 Score=35.59 Aligned_cols=79 Identities=8% Similarity=-0.002 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhh
Q 014329 78 AYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLI 157 (426)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~ 157 (426)
...+...+.....-++.+|.+.+..+..+..+..+....... .+ . . +.......+.|...+......+
T Consensus 270 ~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~-----~~----~--~-~~~~~~~~l~g~~~~~~~~~~~ 337 (420)
T PRK09528 270 FQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGF-----AT----G--P-LEVSILKLLHAFEVPFLLVGVF 337 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHh-----cc----c--H-HHHHHHHHHHHHHHHHHHHHHH
Confidence 344455566666667778877665555555554444333221 11 1 1 1122334455666666665555
Q ss_pred hhcc-CCCHHHH
Q 014329 158 GAAG-ELPDRYM 168 (426)
Q Consensus 158 ~la~-~fp~~~~ 168 (426)
.+.. .+|++..
T Consensus 338 ~~~~~~~~~~~~ 349 (420)
T PRK09528 338 KYITLNFDVRLS 349 (420)
T ss_pred HHHHHHcCccce
Confidence 5544 4677653
No 138
>PRK12382 putative transporter; Provisional
Probab=83.97 E-value=5.5 Score=39.96 Aligned_cols=147 Identities=14% Similarity=-0.012 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHhhhhccccceeeecc-cccCCCchHHHHHHHHHHhhhhhhhhhhhhhh-cccchhHHHHH-HHHHHHHh
Q 014329 274 KWYGFGILLIYIVTLSIFPGYITEDV-HSEILKDWYGIILIAGYNVFDLVGKSLTAIYL-LENEKVAIGGC-FARLLFFP 350 (426)
Q Consensus 274 ~~~~l~~fl~f~vTl~vFP~i~~~~~-~~~~~~~w~~~~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~~s-~~R~~fiP 350 (426)
+...+..++.+...-...|-+ +... ++...+.+..-.....+.++..+++....+.. +.++|+.+... ++..+..-
T Consensus 18 ~~~~~~~~~~~~~~~~~~p~l-~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~ 96 (392)
T PRK12382 18 FRIAFAVFLTYMTVGLPLPVI-PLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGL 96 (392)
T ss_pred HHHHHHHHHHHHHHHHHhhhh-hHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHH
Confidence 444445555555433344443 2111 11122344455667788888888766654432 34566654433 22222111
Q ss_pred hhhccccCCCcc-ccchhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 351 LFLGCLHGPKFF-RTEIPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 351 lf~~c~~~p~~~-~~d~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
.+..+...|... .+.+..++.-++.|+..|...+..+...++..++|||..+-.........|..+|..++
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~ 168 (392)
T PRK12382 97 AYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLG 168 (392)
T ss_pred HHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHH
Confidence 122222112111 22233455556778877766666666667777888888888888888878887777665
No 139
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=83.92 E-value=10 Score=38.39 Aligned_cols=23 Identities=13% Similarity=0.200 Sum_probs=14.4
Q ss_pred HhhhhhhhhhhhhhhhccC-CCHH
Q 014329 144 LSGLADALVQGGLIGAAGE-LPDR 166 (426)
Q Consensus 144 ~~g~~~~~~q~s~~~la~~-fp~~ 166 (426)
+.|+..+......+.+... +|.+
T Consensus 316 ~~g~~~~~~~~~~~~~~~~~~~~~ 339 (402)
T PRK11902 316 CGGMGTAAFVALLMALCNRSFSAT 339 (402)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcHH
Confidence 4556666667777777775 4544
No 140
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=83.70 E-value=37 Score=35.71 Aligned_cols=135 Identities=19% Similarity=0.163 Sum_probs=81.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhh
Q 014329 72 DRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADAL 151 (426)
Q Consensus 72 ~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~ 151 (426)
.-.++.++++...++.=+.-.++.|.+.+.-+..|..+..++.+..... ..||..+++-.+.|++-+.
T Consensus 70 ~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs------------~~Fwq~~l~R~~vGiGeAs 137 (493)
T KOG1330|consen 70 LGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFS------------NHFWQVLLCRGFVGIGEAS 137 (493)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHH------------HHHHHHHHHHHHhccchhh
Confidence 3455556666666666666777888888888888888887766653321 2567777788888888777
Q ss_pred hhhhhhhhcc-CCCHHHHH--------HHHhccccccccchhHHHHHHHHHHHHhcccCccccchhHHHHHHHHHHHHHH
Q 014329 152 VQGGLIGAAG-ELPDRYMQ--------ALVAGTAGSALLSAGVLVSVLRILTKAVYTQDAIGLRKSANLYFAVGIVVMVI 222 (426)
Q Consensus 152 ~q~s~~~la~-~fp~~~~~--------a~~~G~g~a~~~~~Gv~~s~l~ii~~~~~~~~~~~~~~sa~~yF~i~~~~~~~ 222 (426)
+....=++.+ .||+.-=+ +.-.|.|++ ++..+.+.=.+- .=|. =|..+.++.++
T Consensus 138 ~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG-----~vvgs~va~~~~--------~Wr~----af~~~avl~vi 200 (493)
T KOG1330|consen 138 YSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLG-----YVVGSVVASLTF--------WWRW----AFRGSAVLGVI 200 (493)
T ss_pred hcccchhHhhhcCcchhhhHHHHHhhhhccccccee-----EEeeeeeccCcc--------ceEE----EEEeehHHHHH
Confidence 7666666666 46643322 223466666 555443221110 0011 13445666677
Q ss_pred HHHHHHHhhcchh
Q 014329 223 CIVFYNVAHRLPV 235 (426)
Q Consensus 223 ~~~~~~~l~k~p~ 235 (426)
|.++-+++.+.|.
T Consensus 201 ~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 201 VGLLVFLFVREPE 213 (493)
T ss_pred HHHHHHhhccCcc
Confidence 7777777777764
No 141
>PRK11010 ampG muropeptide transporter; Validated
Probab=83.40 E-value=24 Score=37.09 Aligned_cols=20 Identities=5% Similarity=0.019 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHhhcCCCcc
Q 014329 81 LVGLFCLVIIVFYAHKSDAW 100 (426)
Q Consensus 81 ~~~l~~~l~~~~~~~~~s~~ 100 (426)
+..++..++.-.+.+|+..+
T Consensus 270 i~~iiG~ll~G~L~dr~g~~ 289 (491)
T PRK11010 270 LATIVGALYGGILMQRLSLF 289 (491)
T ss_pred HHHHHHHHHHHHHHHHHhHH
Confidence 45555555556666666544
No 142
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=83.36 E-value=18 Score=38.47 Aligned_cols=66 Identities=9% Similarity=0.027 Sum_probs=40.1
Q ss_pred HHHHHHhhhhhHHHHHHhchhHhhccccCCC-c-cchhhHHHHHHHHHHHHHHHHHhhcCCC--cceEeh
Q 014329 39 IIYFTLGLGFLLPWNAFITAVDYFSYLYPEA-S-VDRIFAVAYMLVGLFCLVIIVFYAHKSD--AWVRIN 104 (426)
Q Consensus 39 ~~f~llGi~~L~pwN~~ita~dyf~~~~~~~-~-~~~~~~~~~~~~~l~~~l~~~~~~~~~s--~~~Ri~ 104 (426)
+.|.+..++.-.+=|.+.+-.+++-....+. + -.+.+++.+-...++..++...+..|+. .+.|..
T Consensus 276 w~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~ 345 (495)
T KOG2533|consen 276 WPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLL 345 (495)
T ss_pred HHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHH
Confidence 5555666666666666666555544431111 1 2356777888888888888888877754 444443
No 143
>TIGR00893 2A0114 d-galactonate transporter.
Probab=83.35 E-value=4.2 Score=39.77 Aligned_cols=106 Identities=13% Similarity=0.026 Sum_probs=68.8
Q ss_pred HHHHHHHHhhhhhhhhhhhhhh-cccchhHH-HHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhhee
Q 014329 310 IILIAGYNVFDLVGKSLTAIYL-LENEKVAI-GGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLM 387 (426)
Q Consensus 310 ~~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~-~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~m 387 (426)
-.....+.++..++..+..+.. +.++|+.+ ...++..+...++.. .++.+..++..++.|+..|...+...
T Consensus 32 ~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~g~~~~~~~~~~~ 104 (399)
T TIGR00893 32 GYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAF-------AGAYVSLYILRVLLGAAEAPFFPGII 104 (399)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHH-------HcCHHHHHHHHHHHHHHHHhhhhHHH
Confidence 3556677788888777654432 23444433 222222222111111 12335567777889999998888888
Q ss_pred eecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHHH
Q 014329 388 ILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVAW 422 (426)
Q Consensus 388 i~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s~ 422 (426)
.+.++..++|+|..+..+.......|..+|..++-
T Consensus 105 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 139 (399)
T TIGR00893 105 LIVASWFPASERATAVSIFNSAQGLGGIIGGPLVG 139 (399)
T ss_pred HHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence 88888888899999988888888888888876654
No 144
>PRK09952 shikimate transporter; Provisional
Probab=82.82 E-value=20 Score=36.84 Aligned_cols=27 Identities=15% Similarity=0.128 Sum_probs=16.1
Q ss_pred HHHHhhhhhhhhhhhhhhhcc-CCCHHH
Q 014329 141 AVALSGLADALVQGGLIGAAG-ELPDRY 167 (426)
Q Consensus 141 ~v~~~g~~~~~~q~s~~~la~-~fp~~~ 167 (426)
..++.+++.+...+...++.+ .+|+++
T Consensus 349 ~~~l~~~~~~~~~~~~~~~~~e~~p~~~ 376 (438)
T PRK09952 349 SIMLANIAHDMVVCVQQPMFTEMFGASY 376 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCcch
Confidence 344456666666665566555 578765
No 145
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=82.74 E-value=3.6 Score=41.37 Aligned_cols=116 Identities=15% Similarity=0.008 Sum_probs=66.8
Q ss_pred chHHHHHHHHHHhhhhhhhhhhhhh-hcccchhHHHHHH-HHHHHHhhhhccccCCCc-cccchhHHHHHHHHhhhcchh
Q 014329 306 DWYGIILIAGYNVFDLVGKSLTAIY-LLENEKVAIGGCF-ARLLFFPLFLGCLHGPKF-FRTEIPVTLLTCLLGLTNGYL 382 (426)
Q Consensus 306 ~w~~~~~~~~FnvgD~iGR~~~~~~-~~~~~~~l~~~s~-~R~~fiPlf~~c~~~p~~-~~~d~~~~il~~lfglTnGyl 382 (426)
+...-+...++.++..++.....+. .+.++|+.+..+. +..+...........+.+ ..+.+..++.-++.|+..|..
T Consensus 50 ~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 129 (399)
T PRK05122 50 AFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLA 129 (399)
T ss_pred HHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhh
Confidence 3334456678888888877765443 3356666554433 332221111111111111 122234456667888888877
Q ss_pred hhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 383 TSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 383 ~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
........++..++|+|..+..+.......|..+|..++
T Consensus 130 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~ 168 (399)
T PRK05122 130 GTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLG 168 (399)
T ss_pred cchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHH
Confidence 666655667777888888887777777777777766655
No 146
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=82.43 E-value=5.4 Score=38.69 Aligned_cols=106 Identities=14% Similarity=0.089 Sum_probs=70.3
Q ss_pred HHHHHHHhhhhhhhhhhhhh-hcccchhH-HHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheee
Q 014329 311 ILIAGYNVFDLVGKSLTAIY-LLENEKVA-IGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMI 388 (426)
Q Consensus 311 ~~~~~FnvgD~iGR~~~~~~-~~~~~~~l-~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi 388 (426)
+....+.++-.++.....+. .+.++|+. .+..+++.+..-+..+. ++.+..++..++.|+.+|........
T Consensus 36 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~g~~~~~~~~~~~~ 108 (352)
T PF07690_consen 36 LLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA-------SNFWLLLIARFLLGIGSGFFSPASNA 108 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH-------CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh-------hhHHHHhhhccccccccccccccccc
Confidence 34556666666666665433 23345554 34444443331111111 33456778888999999988888888
Q ss_pred ecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHHHH
Q 014329 389 LAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVAWF 423 (426)
Q Consensus 389 ~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s~~ 423 (426)
+.++..++|||..+-.+......+|..+|..++-.
T Consensus 109 ~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~ 143 (352)
T PF07690_consen 109 LIADWFPPEERGRAFGILSAGFSLGSILGPLLGGF 143 (352)
T ss_dssp HHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccchhhhhhhccccccchhhhhhhcccchhhh
Confidence 88888888999999999999999999988777643
No 147
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=82.37 E-value=10 Score=37.91 Aligned_cols=104 Identities=14% Similarity=0.065 Sum_probs=52.9
Q ss_pred HHHHHHHhhhhhhhhhhhhhh-cccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeee
Q 014329 311 ILIAGYNVFDLVGKSLTAIYL-LENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMIL 389 (426)
Q Consensus 311 ~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ 389 (426)
....++.+++.++.....+.. +.++|+.+.... +......+.+.. .++.+..++..++.|+..|+... ....
T Consensus 58 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~-~~~~ 130 (408)
T PRK09874 58 LVFSITFLFSAIASPFWGGLADRKGRKIMLLRSA--LGMGIVMVLMGL----AQNIWQFLILRALLGLLGGFVPN-ANAL 130 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHH--HHHHHHHHHHHH----HhhHHHHHHHHHHHHHhhhhHHh-HHHH
Confidence 456677777777766543322 234444433222 221111111111 12334455666777887776533 3334
Q ss_pred cCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 390 APKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 390 ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
.++..++++|..+..+.......|..+|..++
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (408)
T PRK09874 131 IATQVPRNKSGWALGTLSTGGVSGALLGPLAG 162 (408)
T ss_pred HHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 45566677777666666555566665554443
No 148
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=82.08 E-value=15 Score=37.04 Aligned_cols=73 Identities=14% Similarity=0.154 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhh
Q 014329 80 MLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGA 159 (426)
Q Consensus 80 ~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~l 159 (426)
....++...+.-++.+|.+.+.-+..+.+...+.++........ . . ...+...+..++.|++.+.........
T Consensus 261 ~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~--~----~-~~~~~~~~~~~~~g~g~~~~~~~~~~~ 333 (406)
T PRK15402 261 FGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVI--S----S-HAYLWLTAGLSLYAFGIGLANAGLYRL 333 (406)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHc--c----c-ccHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 34455555555666677665544445555444444333221110 1 0 112223345555666666655444333
No 149
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=82.07 E-value=66 Score=33.21 Aligned_cols=106 Identities=22% Similarity=0.179 Sum_probs=55.7
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhcc--cchhH--HHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhh
Q 014329 310 IILIAGYNVFDLVGKSLTAIYLLE--NEKVA--IGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSV 385 (426)
Q Consensus 310 ~~~~~~FnvgD~iGR~~~~~~~~~--~~~~l--~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~ 385 (426)
.-+...+..|-++|-....+...+ +++++ +.+...=+.|.- .+. .. ...+.+..-.-++++|+.||.++.-
T Consensus 247 T~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~l-ii~--a~--~~~~~~~~~~~~~l~G~g~G~f~vg 321 (403)
T PF03209_consen 247 TRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFAL-IIL--AG--PLGSPWLFRPGVFLLGLGNGLFTVG 321 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHH-HHH--HH--hcccchHHHHHHHHHHHhhhHHHHH
Confidence 456778889999998877665442 22221 222221122221 111 12 2455677788889999999998763
Q ss_pred eeeecCCCCChh----hHHHHhHHHHHHHHHHHHHHHHH
Q 014329 386 LMILAPKVVQLQ----HAETAGIVIVLFLVLGLAAGSIV 420 (426)
Q Consensus 386 ~mi~ap~~v~~~----ere~ag~~~~~~l~~Gl~~Gs~~ 420 (426)
+....-+..+++ .-..-|..=+.+-.+|..+|..+
T Consensus 322 als~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~ 360 (403)
T PF03209_consen 322 ALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGAL 360 (403)
T ss_pred HHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332211111111 22233444455566666666543
No 150
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=82.00 E-value=6.4 Score=41.34 Aligned_cols=112 Identities=13% Similarity=0.028 Sum_probs=73.5
Q ss_pred HHHHHHHhhhhhhhhhhhhhh-cccchhHHHHH-HHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheee
Q 014329 311 ILIAGYNVFDLVGKSLTAIYL-LENEKVAIGGC-FARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMI 388 (426)
Q Consensus 311 ~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~~s-~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi 388 (426)
.....+++|-.+|..+..+.. ...+|+.+... ++-.+...+........ ...+.+..++.-++.|+..|-.......
T Consensus 60 ~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~r~l~G~~~g~~~~~~~~ 138 (502)
T TIGR00887 60 AVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSS-PKSVMATLCFWRFWLGVGIGGDYPLSAI 138 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcc-cchHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 456677788888877765543 34555543322 22222111111111100 0112345677788899999998888889
Q ss_pred ecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHHHH
Q 014329 389 LAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVAWF 423 (426)
Q Consensus 389 ~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s~~ 423 (426)
+..+..++++|..+..++..+..+|..+|..++..
T Consensus 139 ~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~ 173 (502)
T TIGR00887 139 ITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALI 173 (502)
T ss_pred HHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998877653
No 151
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=81.56 E-value=17 Score=38.32 Aligned_cols=82 Identities=13% Similarity=0.201 Sum_probs=49.9
Q ss_pred chhhhHHHHHHhhhhh------HHHHHHhchh--Hhhccc-----cCCCccchhhHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014329 34 FHLAYIIYFTLGLGFL------LPWNAFITAV--DYFSYL-----YPEASVDRIFAVAYMLVGLFCLVIIVFYAHKSDAW 100 (426)
Q Consensus 34 ~~~~y~~f~llGi~~L------~pwN~~ita~--dyf~~~-----~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~s~~ 100 (426)
.|.-.-+..+-|+|.+ +--|.++... -||+.. +|. +.......+-.+.+++.++..=+++.++..|
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps-~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK 114 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPS-GVLALVNAAALVGTIFGQLFFGWLGDKFGRK 114 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCc-hHHHHHHHHHHHHHHHHHHHHHHHHhhhcch
Confidence 4566677788888864 4445555443 444433 221 2333444555667777888877888887766
Q ss_pred eEehhHHHHHHHHHHH
Q 014329 101 VRINVGLGLFVVALLV 116 (426)
Q Consensus 101 ~Ri~~~l~~~~v~~i~ 116 (426)
.=....+++++++.++
T Consensus 115 ~vYG~~liImIi~t~~ 130 (538)
T KOG0252|consen 115 KVYGKELIIMIICSAL 130 (538)
T ss_pred hhhhHHHHHHHHHHHH
Confidence 5555666777766653
No 152
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=81.55 E-value=30 Score=36.56 Aligned_cols=74 Identities=15% Similarity=0.232 Sum_probs=49.8
Q ss_pred HHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhccCC-CHHH
Q 014329 91 VFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAGEL-PDRY 167 (426)
Q Consensus 91 ~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~~f-p~~~ 167 (426)
.++.+|.+...|+..|+++..+++..++.... +.+ +. .....+..+...++.|++..+.....++++... |++.
T Consensus 341 ~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~-~~~-~~-~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~ 415 (500)
T PRK09584 341 NKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAK-FAN-DA-GIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRL 415 (500)
T ss_pred HHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHH-hcC-CC-CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHH
Confidence 44567777888899999999888877654321 111 11 122334466677788999999999999988754 5543
No 153
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=81.30 E-value=26 Score=36.16 Aligned_cols=102 Identities=13% Similarity=0.111 Sum_probs=55.8
Q ss_pred hHhhccccCCCccch-hhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHH
Q 014329 59 VDYFSYLYPEASVDR-IFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTV 137 (426)
Q Consensus 59 ~dyf~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~ 137 (426)
..|++++|+.++.+. .++..+-+...+..-+-=.+..|+.-+.-....++.++++..+.... .+.......++.
T Consensus 242 ~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~-----~~~~~~~~~~~~ 316 (417)
T COG2223 242 PMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLF-----LTGFGHGGSFVV 316 (417)
T ss_pred HHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHcc-----ccccccCcchHH
Confidence 478888888766553 33333333333333332234555554433445555555544433221 111111234455
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhccC-CCH
Q 014329 138 TVGAVALSGLADALVQGGLIGAAGE-LPD 165 (426)
Q Consensus 138 ~l~~v~~~g~~~~~~q~s~~~la~~-fp~ 165 (426)
........++++++-++++|.+... ||.
T Consensus 317 ~~~~~l~l~~~~G~GnGsvfk~Ip~if~~ 345 (417)
T COG2223 317 FVAVFLALFVFAGLGNGSVFKMIPVIFPK 345 (417)
T ss_pred HHHHHHHHHHHhccCcchheeechHHHHh
Confidence 5666777888999999999998885 444
No 154
>PRK10054 putative transporter; Provisional
Probab=80.05 E-value=9.2 Score=38.79 Aligned_cols=144 Identities=13% Similarity=-0.076 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHhhhhccccceeeecccccCCCchHHHHHHHHHHhhhhhhhhhhhhhh-cccchhHH-HHHHHHHHHHh
Q 014329 273 VKWYGFGILLIYIVTLSIFPGYITEDVHSEILKDWYGIILIAGYNVFDLVGKSLTAIYL-LENEKVAI-GGCFARLLFFP 350 (426)
Q Consensus 273 i~~~~l~~fl~f~vTl~vFP~i~~~~~~~~~~~~w~~~~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~-~~s~~R~~fiP 350 (426)
.|...+..++..+....++|-+...-.+....+....-.....+.++..+++....+.. +.++|+.. +..++..+-..
T Consensus 9 ~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~ 88 (395)
T PRK10054 9 TSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFI 88 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHH
Confidence 45555555555555555555431111111111222223344555666666655543322 23444433 33333333222
Q ss_pred hhhccccCCCccccchhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHHHH
Q 014329 351 LFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVAWF 423 (426)
Q Consensus 351 lf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s~~ 423 (426)
++. +.++.+..++...+.|...+-.........++..++++|..+-.+.....++|..+|..++-.
T Consensus 89 ~~~-------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~ 154 (395)
T PRK10054 89 AIP-------LVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTL 154 (395)
T ss_pred HHH-------HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 221 112222333333344444343333333444666777788888778888888888888766543
No 155
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=79.98 E-value=24 Score=36.93 Aligned_cols=52 Identities=13% Similarity=0.162 Sum_probs=22.7
Q ss_pred HHHHHHhch-hHhhccccCCCccc-hhhHHHHHHHHHHHHHHHHHhhcCCCcce
Q 014329 50 LPWNAFITA-VDYFSYLYPEASVD-RIFAVAYMLVGLFCLVIIVFYAHKSDAWV 101 (426)
Q Consensus 50 ~pwN~~ita-~dyf~~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~s~~~ 101 (426)
..++.+.+- ..|+++.+.-++.+ ......+.+..++...+.-.+.+|+..|.
T Consensus 264 ~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~ 317 (490)
T PRK10642 264 VTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRP 317 (490)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 445555443 34554433222111 22223344444444445555666665443
No 156
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=79.32 E-value=13 Score=38.08 Aligned_cols=51 Identities=12% Similarity=-0.135 Sum_probs=30.5
Q ss_pred HHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHH
Q 014329 368 VTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGS 418 (426)
Q Consensus 368 ~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs 418 (426)
.++..++.|+..|-..........+..++++|..+..+......+|-.+|.
T Consensus 121 l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~ 171 (438)
T TIGR00712 121 MFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPP 171 (438)
T ss_pred HHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHH
Confidence 345556677777655444444445556677788777776666655554443
No 157
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=79.31 E-value=61 Score=37.61 Aligned_cols=85 Identities=11% Similarity=0.055 Sum_probs=47.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhh
Q 014329 74 IFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQ 153 (426)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q 153 (426)
.+...+.+..+++.++.-++.+|...+..+..+.++..++++.+.. .. ..+..++..++.|++.+...
T Consensus 273 ~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~-------~~~~~~~~~~~~g~~~~~~~ 340 (1146)
T PRK08633 273 YLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPT-----AP-------SLASVLVLFFLFGFSAGLFI 340 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHH-----hh-------hHHHHHHHHHHHHHHHHHhh
Confidence 3444556666666777677777766554454555544444433221 11 23344556677777777777
Q ss_pred hhhhhhcc-CCCHHHHHH
Q 014329 154 GGLIGAAG-ELPDRYMQA 170 (426)
Q Consensus 154 ~s~~~la~-~fp~~~~~a 170 (426)
....++.. ..|++..+.
T Consensus 341 ~~~~~~~~~~~p~~~rg~ 358 (1146)
T PRK08633 341 VPLNALIQFRAPEKELGK 358 (1146)
T ss_pred HHHHHHHhhcCCccchhh
Confidence 66666664 456665443
No 158
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=79.24 E-value=18 Score=35.19 Aligned_cols=41 Identities=7% Similarity=-0.048 Sum_probs=24.0
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHH
Q 014329 75 FAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALL 115 (426)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i 115 (426)
+...+.+..++......++.+|.+.+.-+..+..+..+..+
T Consensus 245 ~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 285 (377)
T TIGR00890 245 AVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMA 285 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHH
Confidence 44455666667777777777777655444455554444443
No 159
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=79.10 E-value=7.9 Score=43.24 Aligned_cols=106 Identities=12% Similarity=0.032 Sum_probs=65.8
Q ss_pred HHHHHHHhhhhhhhhhhhhhh-cccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeee
Q 014329 311 ILIAGYNVFDLVGKSLTAIYL-LENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMIL 389 (426)
Q Consensus 311 ~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ 389 (426)
.+...+.+|-.+|..+..+.. +..+|+.++... +++....+.+. +-++.+..++.-++.|+..|-....+..+
T Consensus 206 ~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~l--il~~i~~ll~a----fa~s~~~llv~R~l~G~g~g~~~p~~~~~ 279 (742)
T TIGR01299 206 MLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICL--SVNGFFAFFSS----FVQGYGFFLFCRLLSGFGIGGAIPIVFSY 279 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH--HHHHHHHHHHH----HHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566777778877654433 234555433322 11111111111 11233456677788898888777788888
Q ss_pred cCCCCChhhHHHHhHHHHHHHHHHHHHHHHHHH
Q 014329 390 APKVVQLQHAETAGIVIVLFLVLGLAAGSIVAW 422 (426)
Q Consensus 390 ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s~ 422 (426)
..+..++++|..+-.++..+..+|..+|..++.
T Consensus 280 isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~ 312 (742)
T TIGR01299 280 FAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAW 312 (742)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888887777777888877776554
No 160
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=78.78 E-value=49 Score=34.33 Aligned_cols=173 Identities=11% Similarity=0.128 Sum_probs=90.1
Q ss_pred HHHHHHhhhhhHHHHHHhch-hHhhccccCCCccc----hhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHH
Q 014329 39 IIYFTLGLGFLLPWNAFITA-VDYFSYLYPEASVD----RIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVA 113 (426)
Q Consensus 39 ~~f~llGi~~L~pwN~~ita-~dyf~~~~~~~~~~----~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~ 113 (426)
+.+.++=+|+---|+.+-.. ..||...+++.... .++...-.....+......++.+|+..|.-...+.+++.+=
T Consensus 223 w~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iR 302 (412)
T PF01306_consen 223 WFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIR 302 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHH
Confidence 33333333344446666543 46777777664332 22333334445555556667788877665555444444332
Q ss_pred HHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhcc-CCCHHHH-HHHHhccccccccchhHHHHHHH
Q 014329 114 LLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAG-ELPDRYM-QALVAGTAGSALLSAGVLVSVLR 191 (426)
Q Consensus 114 ~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~-~fp~~~~-~a~~~G~g~a~~~~~Gv~~s~l~ 191 (426)
.+.... .+ .-+....+=.+=|+--+++--+.+-+.+ .+|+|.. ..++.|.+++ .|+-..+..
T Consensus 303 i~~~~~-----~~-------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~----~~~~~~i~s 366 (412)
T PF01306_consen 303 IIGSGF-----AT-------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFA----KQIGIIILS 366 (412)
T ss_dssp HHHHHT--------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTT----HHHHHHHHH
T ss_pred HHHHhh-----hc-------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHH----HHHHHHHHh
Confidence 222111 11 1122333444455556666666677665 6998875 5667774444 155555555
Q ss_pred HHHHHhcccCccccchh-HHHHHHHHHHHHHHHHHHHHHhhcc
Q 014329 192 ILTKAVYTQDAIGLRKS-ANLYFAVGIVVMVICIVFYNVAHRL 233 (426)
Q Consensus 192 ii~~~~~~~~~~~~~~s-a~~yF~i~~~~~~~~~~~~~~l~k~ 233 (426)
.+.-...+ +.+ .-.|+.++.+....++++.+.++|.
T Consensus 367 ~~~G~lyd------~~G~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 367 PLAGYLYD------RIGFQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred hhHHhhHh------hcCcHHHHHHHHHHHHHHHHHheeeecCC
Confidence 55444432 122 3478888888888888888777664
No 161
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=78.70 E-value=7.4 Score=40.08 Aligned_cols=104 Identities=13% Similarity=0.081 Sum_probs=66.8
Q ss_pred HHHHHHhhhhhhhhhhhhhh-cccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeeec
Q 014329 312 LIAGYNVFDLVGKSLTAIYL-LENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMILA 390 (426)
Q Consensus 312 ~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~a 390 (426)
....|.++..++..+..+.. +.++|+.+.... +++....+.|... ++.+..++..++.|+..|........+.
T Consensus 42 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~--~~~~~~~~~~~~~----~~~~~l~~~~~~~G~~~~~~~~~~~~~i 115 (485)
T TIGR00711 42 VITSYMLANAISIPLTGWLAKRFGTRRLFLIST--FAFTLGSLLCGVA----PNLELMIIFRVIQGFGGGPLIPLSFSTL 115 (485)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHH--HHHHHHHHHHhCc----CCHHHHHHHHHHHHhhhhhHHHHHHHHH
Confidence 45566777777766544322 345555443332 2222222223222 2334566777888999998888888888
Q ss_pred CCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 391 PKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 391 p~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
++..++++|..+..+......+|..+|..++
T Consensus 116 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 146 (485)
T TIGR00711 116 LNIYPPEKRGRAMAIWGLTVLVAPALGPTLG 146 (485)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHhhhhhccH
Confidence 8888899999888888888888877776554
No 162
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=77.70 E-value=99 Score=32.63 Aligned_cols=57 Identities=14% Similarity=0.215 Sum_probs=35.3
Q ss_pred hhHHHHHHHHhhhcchhhhheeeecCCCCChhh-------HHHHhHHHHHHHHHHHHHHHHHHH
Q 014329 366 IPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQH-------AETAGIVIVLFLVLGLAAGSIVAW 422 (426)
Q Consensus 366 ~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~e-------re~ag~~~~~~l~~Gl~~Gs~~s~ 422 (426)
+..++..++.++-.|-...+....-|+.++-+| ..+.-..++|+.=.|..+|+.+.-
T Consensus 328 ~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g 391 (467)
T COG2211 328 VLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPG 391 (467)
T ss_pred HHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 344444456666666666666666677776433 123456688888888888876543
No 163
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=77.37 E-value=26 Score=34.46 Aligned_cols=78 Identities=13% Similarity=-0.046 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhh
Q 014329 76 AVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGG 155 (426)
Q Consensus 76 ~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s 155 (426)
...+.....+..++..++.+|++.+.-+..+..+.++..++... .+ .. .......+.|++.+..-..
T Consensus 184 ~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~-----~~----~~----~~~~~~~l~g~~~s~i~P~ 250 (310)
T TIGR01272 184 TAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAAL-----TH----GY----VAMWFVLALGLFNSIMFPT 250 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH-----cC----CH----HHHHHHHHHHHHHHHHHHH
Confidence 44566666677777778888887554343444433333322111 11 11 1233555788999999999
Q ss_pred hhhhccC-CCHH
Q 014329 156 LIGAAGE-LPDR 166 (426)
Q Consensus 156 ~~~la~~-fp~~ 166 (426)
.++.+.. +|++
T Consensus 251 ~~s~a~~~~~~~ 262 (310)
T TIGR01272 251 IFSLALNALGRH 262 (310)
T ss_pred HHHHHHhhhhhh
Confidence 9988876 6653
No 164
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=77.09 E-value=11 Score=38.36 Aligned_cols=105 Identities=12% Similarity=0.139 Sum_probs=61.6
Q ss_pred HHHHHHHhhhhhhhhhhhhhh-cccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeee
Q 014329 311 ILIAGYNVFDLVGKSLTAIYL-LENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMIL 389 (426)
Q Consensus 311 ~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ 389 (426)
....+|.++=.+|.....+.. +..+|+.+.... +++....+.+.. -++.+..++.-++.|+.+|-.....+.+
T Consensus 47 ~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~--~~~~~~~~~~~~----~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 120 (412)
T TIGR02332 47 LAATLFYAAYVICGIPSNIMLAIIGARRWIAGIM--VLWGIASTATMF----ATGPESLYLLRILVGIAEAGFLPGILLY 120 (412)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHH--HHHHHHHHHHHH----hcCHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 344555555555554443222 234555443333 222222222221 1223455666778899988766666666
Q ss_pred cCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 390 APKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 390 ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
..+..++++|..+..+.......|..+|..++
T Consensus 121 ~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~ 152 (412)
T TIGR02332 121 LTFWFPAYFRARANALFMIAMPVTMALGLILS 152 (412)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67777888899988888888888888877665
No 165
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=76.78 E-value=24 Score=35.22 Aligned_cols=38 Identities=13% Similarity=-0.082 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHH
Q 014329 77 VAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVAL 114 (426)
Q Consensus 77 ~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~ 114 (426)
..+....++......++.+|++.+..+..++++..+..
T Consensus 246 ~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~ 283 (392)
T PRK10473 246 ALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAG 283 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 44555666666666777888776554555555444433
No 166
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=76.59 E-value=27 Score=33.94 Aligned_cols=31 Identities=19% Similarity=0.057 Sum_probs=17.0
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCCcceEehh
Q 014329 75 FAVAYMLVGLFCLVIIVFYAHKSDAWVRINV 105 (426)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~ 105 (426)
....+.+..++..++..++.+|...+.|...
T Consensus 257 ~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~ 287 (379)
T TIGR00881 257 AFTLYELGGLVGTLLAGWLSDKLFNGRRGPL 287 (379)
T ss_pred HHHHHHHHcchhHHHHHHHHHHHcCCcchHH
Confidence 3344556666666666666665433444433
No 167
>PRK10091 MFS transport protein AraJ; Provisional
Probab=76.45 E-value=12 Score=37.56 Aligned_cols=103 Identities=15% Similarity=0.038 Sum_probs=56.1
Q ss_pred HHHHHHHhhhhhhhhhhhhhh-cccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeee
Q 014329 311 ILIAGYNVFDLVGKSLTAIYL-LENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMIL 389 (426)
Q Consensus 311 ~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ 389 (426)
.....++++-.+|+....+.. +.++|+...... ++.....+++-. -++.+...+..++.|+..|-........
T Consensus 42 ~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~--~~~~~~~~l~~~----~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 115 (382)
T PRK10091 42 HMISYYALGVVVGAPIIALFSSRYSLKHILLFLV--ALCVIGNAMFTL----SSSYLMLAIGRLVSGFPHGAFFGVGAIV 115 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHH--HHHHHHHHHHHH----hCcHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 456778888888877765433 345555443322 222222222221 1233556667778888877655554455
Q ss_pred cCCCCChhhHHHHhHHHHHHHHHHHHHHHH
Q 014329 390 APKVVQLQHAETAGIVIVLFLVLGLAAGSI 419 (426)
Q Consensus 390 ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~ 419 (426)
..+..++++|..+-.+......+|..+|..
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 145 (382)
T PRK10091 116 LSKIIKPGKVTAAVAGMVSGMTVANLLGIP 145 (382)
T ss_pred HHHhCChHHhhHHHHHHHHHHHHHHHHhcc
Confidence 555556666666555555555555544433
No 168
>PRK03545 putative arabinose transporter; Provisional
Probab=76.41 E-value=17 Score=36.41 Aligned_cols=59 Identities=12% Similarity=0.039 Sum_probs=43.7
Q ss_pred cchhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHHH
Q 014329 364 TEIPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVAW 422 (426)
Q Consensus 364 ~d~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s~ 422 (426)
+.+...+..++.|+.+|...+....+.++..++|+|..+-.+.......|..+|..++-
T Consensus 96 ~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~ 154 (390)
T PRK03545 96 NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGR 154 (390)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHH
Confidence 33555666678888888777766666677778888988888888888888777766553
No 169
>PRK11663 regulatory protein UhpC; Provisional
Probab=76.06 E-value=16 Score=37.42 Aligned_cols=105 Identities=14% Similarity=-0.038 Sum_probs=56.5
Q ss_pred HHHHHHHhhhhhhhhhhhhhh-cccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeee
Q 014329 311 ILIAGYNVFDLVGKSLTAIYL-LENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMIL 389 (426)
Q Consensus 311 ~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ 389 (426)
.....+.++-.+++....+.. +.++|+.+.... ++.....+.+.. .++.+...+..++.|+..|-........
T Consensus 62 ~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~--~~~~~~~~~~~~----~~~~~~l~~~~~l~g~~~g~~~~~~~~~ 135 (434)
T PRK11663 62 LLATLFYITYGVSKFVSGIVSDRSNARYFMGIGL--IATGIINILFGF----SSSLWAFALLWVLNAFFQGWGWPVCAKL 135 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHH--HHHHHHHHHHHH----HhHHHHHHHHHHHHHHHHHccchHHHHH
Confidence 345566777767766654432 345555433322 221111111111 1222334444556677776544444445
Q ss_pred cCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 390 APKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 390 ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
..+..++++|..+..+......+|..+|..++
T Consensus 136 ~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~ 167 (434)
T PRK11663 136 LTAWYSRTERGGWWAIWNTAHNVGGALIPLVV 167 (434)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666778888888887777777777776543
No 170
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=75.89 E-value=1e+02 Score=31.85 Aligned_cols=147 Identities=18% Similarity=0.158 Sum_probs=81.9
Q ss_pred hhHHHHHHHHHHHHHHHHH-hhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhh
Q 014329 74 IFAVAYMLVGLFCLVIIVF-YAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALV 152 (426)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~-~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~ 152 (426)
-++-......++.....-+ ..++.+.+.-...++..-++++..+.+... .+ +. +..-..+++.|+++|+.
T Consensus 248 ~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~--~~----~~---~~~~~~~~l~G~g~G~f 318 (403)
T PF03209_consen 248 RLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGP--LG----SP---WLFRPGVFLLGLGNGLF 318 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHh--cc----cc---hHHHHHHHHHHHhhhHH
Confidence 3444444444544444333 344544332233555555555554433221 21 11 22334566788888887
Q ss_pred hhhhhhhccCCC-----HHHHHHHHhccccccccchhHHHHHHHHHHHHhcccCccccchhHHHHHHHHHHHHHHHHHHH
Q 014329 153 QGGLIGAAGELP-----DRYMQALVAGTAGSALLSAGVLVSVLRILTKAVYTQDAIGLRKSANLYFAVGIVVMVICIVFY 227 (426)
Q Consensus 153 q~s~~~la~~fp-----~~~~~a~~~G~g~a~~~~~Gv~~s~l~ii~~~~~~~~~~~~~~sa~~yF~i~~~~~~~~~~~~ 227 (426)
..+..+.+=.+- .-++++|-.-|+.+ .++++++.-.++.+.+...+++ +...--.=|.+-++..++|+...
T Consensus 319 ~vgals~mM~lt~~~~aG~~mG~WGaaQA~A-~Glg~~~GG~~~D~~~~~~~~~---~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 319 TVGALSLMMDLTSAGRAGLFMGAWGAAQAIA-RGLGTFLGGALRDLVRALFGNS---PALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHHHHHHHhCCCCcchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhccCC---cchHHHHHHHHHHHHHHHHHHHH
Confidence 766555443222 24888888888877 6677888888999988876531 22222333667777777777665
Q ss_pred HHhhcc
Q 014329 228 NVAHRL 233 (426)
Q Consensus 228 ~~l~k~ 233 (426)
.-+.|.
T Consensus 395 ~~l~~~ 400 (403)
T PF03209_consen 395 GRLDRR 400 (403)
T ss_pred HHhhhh
Confidence 544443
No 171
>PRK03633 putative MFS family transporter protein; Provisional
Probab=75.72 E-value=13 Score=37.25 Aligned_cols=108 Identities=12% Similarity=-0.010 Sum_probs=58.9
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhh-cccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhhe
Q 014329 308 YGIILIAGYNVFDLVGKSLTAIYL-LENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVL 386 (426)
Q Consensus 308 ~~~~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~ 386 (426)
..-+....+.++..+|.....+.. +..+|+.+.... ++.......+.. .++.+...+..++.|+..|-.....
T Consensus 42 ~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~--~~~~~~~~~~~~----~~~~~~l~~~~~l~G~~~~~~~~~~ 115 (381)
T PRK03633 42 QVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLAS--LIFAAGCAGLGL----MVGFWSWLAWRFVAGIGCAMIWVVV 115 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHH----hccHHHHHHHHHHHHHHHHHHHHHH
Confidence 344667788888888877754432 233444333222 222222222222 2233445566677788877554333
Q ss_pred eeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 387 MILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 387 mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
.....+..++++|..+-.......++|..+|..++
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 150 (381)
T PRK03633 116 ESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLV 150 (381)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22223444566777776666677777777776654
No 172
>PRK09848 glucuronide transporter; Provisional
Probab=75.23 E-value=1e+02 Score=31.55 Aligned_cols=56 Identities=13% Similarity=0.130 Sum_probs=34.6
Q ss_pred hhHHHHHHHHhhhcchhhhheeeecCCCCChhh-------HHHHhHHHHHHHHHHHHHHHHHH
Q 014329 366 IPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQH-------AETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 366 ~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~e-------re~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
+..++.++++|+..|..........++.++.+| +.....+.+++..+|..+|..+.
T Consensus 320 ~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~ 382 (448)
T PRK09848 320 PVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIP 382 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 334455667777777666665555555555443 24455677777778888876654
No 173
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=75.15 E-value=17 Score=37.04 Aligned_cols=105 Identities=9% Similarity=0.026 Sum_probs=57.4
Q ss_pred HHHHHHHhhhhhhhhhhhh-hhcccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeee
Q 014329 311 ILIAGYNVFDLVGKSLTAI-YLLENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMIL 389 (426)
Q Consensus 311 ~~~~~FnvgD~iGR~~~~~-~~~~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ 389 (426)
.....|.++-.+|...... ..+..+|+.+.... +++....+.|... ++.+..++.-++.|+.+|.........
T Consensus 55 ~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~--~~~~~~~~~~~~a----~~~~~l~~~r~l~Gi~~~~~~~~~~~~ 128 (413)
T PRK15403 55 ASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGA--LIFTLACAATLFT----TSMTQFLIARFIQGTSICFIATVGYVT 128 (413)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHH--HHHHHHHHHHHHc----CCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666777777665433 22345555444332 3333333333322 233455666778888888766666555
Q ss_pred cCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 390 APKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 390 ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
.++..+++++..+-.+......+|-.+|..++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg 160 (413)
T PRK15403 129 VQEAFGQTKGIKLMAIITSIVLVAPIIGPLSG 160 (413)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666666766665555555555555555444
No 174
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=73.43 E-value=13 Score=38.15 Aligned_cols=141 Identities=19% Similarity=0.141 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHHhhhhccccceeeecccccCCCchHHHHHHHHHHhhhhhhhhhhhhh-hcccchhHHHHHHHHHHH
Q 014329 270 VGRVKWYGFGILLIYIVTLSIFPGYITEDVHSEILKDWYGIILIAGYNVFDLVGKSLTAIY-LLENEKVAIGGCFARLLF 348 (426)
Q Consensus 270 ~k~i~~~~l~~fl~f~vTl~vFP~i~~~~~~~~~~~~w~~~~~~~~FnvgD~iGR~~~~~~-~~~~~~~l~~~s~~R~~f 348 (426)
.+.++...++.|..=..++..= |+.++.-++-..+.=..=.++..|..+-.+|--+.... ...++|+++.... .+|
T Consensus 12 ~~~l~aLa~~~F~igttEfv~~-gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l--~lF 88 (394)
T COG2814 12 WLALLALALAAFAIGTTEFVPV-GLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLL--ALF 88 (394)
T ss_pred hHHHHHHHHHHHHHHhHHHHHH-hchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHH--HHH
Confidence 3556677777666555554222 22222112111111111234678888888887664333 3356666655433 233
Q ss_pred HhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHH
Q 014329 349 FPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAG 417 (426)
Q Consensus 349 iPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~G 417 (426)
+-==++|...|.+ +...+-=++.|+++|-+-+.....+.+.+++++|..|-.++...+++.+.+|
T Consensus 89 i~~n~l~alAp~f----~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~G 153 (394)
T COG2814 89 IVSNLLSALAPSF----AVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLG 153 (394)
T ss_pred HHHHHHHHHhccH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHh
Confidence 3222223333432 4455666789999999999999999999999998888777765555444433
No 175
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=73.13 E-value=14 Score=39.15 Aligned_cols=151 Identities=13% Similarity=0.044 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHHhhhhccccceeeeccc--ccCCCchHHHHHHHHHHhhhhhhhhhhhhhhcccchhHHHHHHHHHH
Q 014329 270 VGRVKWYGFGILLIYIVTLSIFPGYITEDVH--SEILKDWYGIILIAGYNVFDLVGKSLTAIYLLENEKVAIGGCFARLL 347 (426)
Q Consensus 270 ~k~i~~~~l~~fl~f~vTl~vFP~i~~~~~~--~~~~~~w~~~~~~~~FnvgD~iGR~~~~~~~~~~~~~l~~~s~~R~~ 347 (426)
+|.+|...++-|+..+-.-.++|+.-+-..+ .+...+.+- +.....++|=.++-..-.++.-.+.+.-+-+.+.|++
T Consensus 33 wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG-~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii 111 (488)
T KOG2325|consen 33 WRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFG-LVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLI 111 (488)
T ss_pred hHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhh-HHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHH
Confidence 4666777888888888777777775222111 111233333 3455688888888666555443333223344555555
Q ss_pred HHhh--hhcccc-CCCccccchhHHHHHHHHhhhcchhhhheeeec-CCCCChhhHHHHhHHH--HHHHHHHHHHHHHHH
Q 014329 348 FFPL--FLGCLH-GPKFFRTEIPVTLLTCLLGLTNGYLTSVLMILA-PKVVQLQHAETAGIVI--VLFLVLGLAAGSIVA 421 (426)
Q Consensus 348 fiPl--f~~c~~-~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~a-p~~v~~~ere~ag~~~--~~~l~~Gl~~Gs~~s 421 (426)
.+.- ..+|.. .|.- +-|...+-=++.|+.+|=.+.+==..+ ...++++-|..|+.-. .+...+|-.+|.+++
T Consensus 112 ~~~g~llY~~l~~~~~~--~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~ 189 (488)
T KOG2325|consen 112 AIIGNLLYLALAYVPNG--VKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFT 189 (488)
T ss_pred HHHHHHHHHHHHhcccc--hHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHh
Confidence 4432 222332 2211 222333333467777665544322222 2234455566665555 666667777776665
Q ss_pred HH
Q 014329 422 WF 423 (426)
Q Consensus 422 ~~ 423 (426)
.+
T Consensus 190 ~L 191 (488)
T KOG2325|consen 190 PL 191 (488)
T ss_pred hh
Confidence 43
No 176
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=73.00 E-value=1.3e+02 Score=31.72 Aligned_cols=37 Identities=22% Similarity=0.152 Sum_probs=30.0
Q ss_pred hhHHHHHHHHHhhhhhhhhhhhhhhhccC-CCHHHHHH
Q 014329 134 GFTVTVGAVALSGLADALVQGGLIGAAGE-LPDRYMQA 170 (426)
Q Consensus 134 ~f~~~l~~v~~~g~~~~~~q~s~~~la~~-fp~~~~~a 170 (426)
.+.+.+++..+.|+.++..|+..+.+.+. +|++-.|+
T Consensus 352 ~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~~~~~ 389 (461)
T KOG3098|consen 352 SYYLALIIGFLLGFGDACFNTQRYVIIALLYPDDRAQA 389 (461)
T ss_pred chhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchHHH
Confidence 47788999999999999999999998885 55555443
No 177
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=72.63 E-value=24 Score=35.31 Aligned_cols=104 Identities=11% Similarity=0.060 Sum_probs=52.9
Q ss_pred HHHHHHHhhhhhhhhhhhhhh-cccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeee
Q 014329 311 ILIAGYNVFDLVGKSLTAIYL-LENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMIL 389 (426)
Q Consensus 311 ~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ 389 (426)
.....+.++..++........ +.++|+.+.... +......+.+... ++.+..++..++.|+..|.........
T Consensus 47 ~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~--~~~~~~~~~~~~~----~~~~~l~~~~~~~g~~~~~~~~~~~~~ 120 (394)
T PRK11652 47 AVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGM--SIFILGTLVALFA----HSLTVLIAASAIQGLGTGVGGVMARTL 120 (394)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHH--HHHHHHHHHHHHH----ccHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 344556666666655533222 234555433222 2222222222211 223445566677788877666655555
Q ss_pred cCCCCChhhHHHHhHHHHHHHHHHHHHHHHH
Q 014329 390 APKVVQLQHAETAGIVIVLFLVLGLAAGSIV 420 (426)
Q Consensus 390 ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~ 420 (426)
.++..+++++..+.........+|..+|..+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i 151 (394)
T PRK11652 121 PRDLYEGTQLRHANSLLNMGILVSPLLAPLI 151 (394)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555666677666666656666555555443
No 178
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=72.50 E-value=22 Score=36.68 Aligned_cols=102 Identities=13% Similarity=-0.069 Sum_probs=47.7
Q ss_pred HHHHHHHhhhhhhhhhhhhh-hcccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeee
Q 014329 311 ILIAGYNVFDLVGKSLTAIY-LLENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMIL 389 (426)
Q Consensus 311 ~~~~~FnvgD~iGR~~~~~~-~~~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ 389 (426)
+...++.++..+|.....+. .+..+|+.++... +++....+.+...+..-.+.+..++..++.|+..|.........
T Consensus 67 ~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~ 144 (452)
T PRK11273 67 FALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGL--ILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRT 144 (452)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHH--HHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHH
Confidence 34556666666666554332 2334555443332 22221111111111111222344555667777776543322333
Q ss_pred cCCCCChhhHHHHhHHHHHHHHHHH
Q 014329 390 APKVVQLQHAETAGIVIVLFLVLGL 414 (426)
Q Consensus 390 ap~~v~~~ere~ag~~~~~~l~~Gl 414 (426)
..+..++++|..+..+......+|.
T Consensus 145 ~~~~~~~~~r~~~~~~~~~~~~~g~ 169 (452)
T PRK11273 145 MVHWWSQKERGGIVSVWNCAHNVGG 169 (452)
T ss_pred HHHhCChHHHHHHHHHHHHHHHhhh
Confidence 3445566778777766655555553
No 179
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=72.49 E-value=28 Score=37.38 Aligned_cols=163 Identities=14% Similarity=0.190 Sum_probs=98.3
Q ss_pred hhhHHHHHHhhhhhHHHHHHhchhHhhccc-cCCCc-cchhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHH
Q 014329 36 LAYIIYFTLGLGFLLPWNAFITAVDYFSYL-YPEAS-VDRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVA 113 (426)
Q Consensus 36 ~~y~~f~llGi~~L~pwN~~ita~dyf~~~-~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~ 113 (426)
+..+.-+++|.|..+-||.. ||+-+ ....+ ..-+.....-..-+..-..-.++.+|+.+..-+..++..+.+=
T Consensus 375 lff~~av~mG~g~~lv~tFL-----fWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~R 449 (618)
T KOG3762|consen 375 LFFFVAVVMGAGVGLVFTFL-----FWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGR 449 (618)
T ss_pred ehhHHHHHHHHHHHHHHHHH-----HHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHH
Confidence 34455678999999999998 77743 22222 2223333333333444444456788888877777888888777
Q ss_pred HHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhccC-CCHHHH---HHHHh------ccccccccch
Q 014329 114 LLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAGE-LPDRYM---QALVA------GTAGSALLSA 183 (426)
Q Consensus 114 ~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~~-fp~~~~---~a~~~------G~g~a~~~~~ 183 (426)
++.+..+ . .-|.++.+=++.|+..+.+=.++-++++. .||+.. |+++- |-|++
T Consensus 450 f~~~S~L-----~-------n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~G----- 512 (618)
T KOG3762|consen 450 FLYYSYL-----Q-------NPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLG----- 512 (618)
T ss_pred HHHHHHh-----c-------CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchh-----
Confidence 7654332 2 22557778889999999999999888884 777653 44432 22222
Q ss_pred hHHHHHHHHHHHHhcccCccccchhHHHHHHHHHHHHHHHHHHHHHh
Q 014329 184 GVLVSVLRILTKAVYTQDAIGLRKSANLYFAVGIVVMVICIVFYNVA 230 (426)
Q Consensus 184 Gv~~s~l~ii~~~~~~~~~~~~~~sa~~yF~i~~~~~~~~~~~~~~l 230 (426)
|++--...-.+ +. ..++-+|++++++.++..+++.++
T Consensus 513 ----slIGG~~v~~f-----g~-~ttf~~~giAcl~~l~~~~~iq~~ 549 (618)
T KOG3762|consen 513 ----SLIGGFVVERF-----GA-RTTFRIFGIACLVTLALFISIQLL 549 (618)
T ss_pred ----hhhhhhhheee-----hh-HHHHHHHHHHHHHHHHHHHHhhhh
Confidence 22211111001 11 335667788887777766666543
No 180
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=72.35 E-value=83 Score=31.44 Aligned_cols=173 Identities=14% Similarity=0.171 Sum_probs=83.1
Q ss_pred CchhhhHHHHHHhhhhhHHHHHHhc-hhHhhccccCCC--ccchhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHH
Q 014329 33 TFHLAYIIYFTLGLGFLLPWNAFIT-AVDYFSYLYPEA--SVDRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGL 109 (426)
Q Consensus 33 ~~~~~y~~f~llGi~~L~pwN~~it-a~dyf~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~ 109 (426)
.+....+.-+.+-+...+.|--|++ +.-+|++||.-+ +-.+..+.+|.++....-..-. +..|...+.-.+.+-.+
T Consensus 261 ~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~-i~Dk~G~n~~wv~~a~~ 339 (459)
T KOG4686|consen 261 TFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGA-ISDKYGFNLWWVASACI 339 (459)
T ss_pred ccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHH-hHhhhcceehhHHHHHH
Confidence 3444455555555566677888888 568999998543 3355667777766655433322 22232222222222111
Q ss_pred HHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhccCCCHHHHHHHHhccccccccchhHH---
Q 014329 110 FVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAGELPDRYMQALVAGTAGSALLSAGVL--- 186 (426)
Q Consensus 110 ~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~~fp~~~~~a~~~G~g~a~~~~~Gv~--- 186 (426)
..+ ..=..+.+ + ++---+...+.|.+-+++..+.--..+..=||+. .|++.+ =+-
T Consensus 340 ~tl--~~H~~l~F--t---------~lsPy~~m~~lGLsysllAcslWP~va~~vpE~q----LGTayg-----f~qsIq 397 (459)
T KOG4686|consen 340 LTL--LGHSGLFF--T---------FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQ----LGTAYG-----FIQSIQ 397 (459)
T ss_pred HHH--HHhhhHHh--h---------hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHH----hcchHH-----HHHHHH
Confidence 111 00011111 1 1111124456788888888877777765545542 454444 211
Q ss_pred ---HHHHHHHHHHhcccCccccchhHHHHHHHHHHHHHHHHHHHHHh
Q 014329 187 ---VSVLRILTKAVYTQDAIGLRKSANLYFAVGIVVMVICIVFYNVA 230 (426)
Q Consensus 187 ---~s~l~ii~~~~~~~~~~~~~~sa~~yF~i~~~~~~~~~~~~~~l 230 (426)
-+++.|+.....+. ++-...-=.||.+...+.++.....+++
T Consensus 398 NLgla~i~Iiag~i~d~--~g~y~~le~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 398 NLGLAFIPIIAGFIADG--DGSYDNLEAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred hhhhhHHhhhhheeecC--CCchhhHHHHHHHHHHHHHHHHHHHhhe
Confidence 23333333333322 2323334556666655555554444433
No 181
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=72.13 E-value=21 Score=34.98 Aligned_cols=29 Identities=14% Similarity=0.004 Sum_probs=17.4
Q ss_pred HHHHHHhhhhhhhhhhhhhhhcc-CCCHHH
Q 014329 139 VGAVALSGLADALVQGGLIGAAG-ELPDRY 167 (426)
Q Consensus 139 l~~v~~~g~~~~~~q~s~~~la~-~fp~~~ 167 (426)
+....+.|++.+..++...+... .+|++.
T Consensus 316 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~ 345 (394)
T TIGR00883 316 FFLVLGLALIGGMYTGPMGSFLPELFPTEV 345 (394)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhCCccc
Confidence 34455566666666666666655 567654
No 182
>PRK12307 putative sialic acid transporter; Provisional
Probab=71.07 E-value=28 Score=35.11 Aligned_cols=106 Identities=11% Similarity=-0.056 Sum_probs=61.1
Q ss_pred HHHHHHHHhhhhhhhhhhhhhh-cccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheee
Q 014329 310 IILIAGYNVFDLVGKSLTAIYL-LENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMI 388 (426)
Q Consensus 310 ~~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi 388 (426)
-....++.++-.+|.....+.. +.++|+.+.... ++.....+.+. +.++.+..++.-++.|+..|-..+....
T Consensus 56 ~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~--~~~~~~~~~~~----~~~~~~~l~~~r~l~G~g~g~~~~~~~~ 129 (426)
T PRK12307 56 AFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSI--VAYSVGTGLSG----LASGVIMLTLSRFIVGMGMAGEYACAST 129 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHH--HHHHHHHHHHH----HHhHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 3455567777777665543322 245555443322 22211111111 1123344566667788877766666666
Q ss_pred ecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 389 LAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 389 ~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
+..+..++|+|..+..+......+|..+|..+.
T Consensus 130 ~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~ 162 (426)
T PRK12307 130 YAVESWPKHLKSKASAFLVSGFGIGNIIAAYFM 162 (426)
T ss_pred HHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHH
Confidence 667777888888888887777777877776543
No 183
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=70.49 E-value=38 Score=39.45 Aligned_cols=109 Identities=7% Similarity=-0.144 Sum_probs=50.5
Q ss_pred hHhhccccCCCcc-chhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCc------
Q 014329 59 VDYFSYLYPEASV-DRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGL------ 131 (426)
Q Consensus 59 ~dyf~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~------ 131 (426)
..|.++.+..+.. ...+...+.+..++..++.-.+.++...+..+..+.++..+..+.++.. ..........
T Consensus 249 p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~ 327 (1140)
T PRK06814 249 PLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFA-SSSVPAEPAQLKSILV 327 (1140)
T ss_pred HHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhc-ccccccccccccchhh
Confidence 4555555533322 2233344555666666666666655444444444444433333222211 0000000000
Q ss_pred ---chhhHHHHHHHHHhhhhhhhhhhhhhhhcc-CCCHHHH
Q 014329 132 ---YDGFTVTVGAVALSGLADALVQGGLIGAAG-ELPDRYM 168 (426)
Q Consensus 132 ---~~~f~~~l~~v~~~g~~~~~~q~s~~~la~-~fp~~~~ 168 (426)
....+..++..++.|++.+.......++.. ..|+++.
T Consensus 328 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~ 368 (1140)
T PRK06814 328 FLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHR 368 (1140)
T ss_pred hhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccc
Confidence 012233445566678888887777777755 5676664
No 184
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=70.18 E-value=55 Score=26.28 Aligned_cols=77 Identities=19% Similarity=0.158 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhh
Q 014329 79 YMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIG 158 (426)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~ 158 (426)
+.+..++.....-++.+|.+.|..+..+.....+..+.... .+ .++..++...+.|++.+..+....+
T Consensus 7 ~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~-----~~-------~~~~~~~~~~~~g~~~~~~~~~~~~ 74 (141)
T TIGR00880 7 YALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFAL-----SS-------NITVLIIARFLQGFGAAFALVAGAA 74 (141)
T ss_pred ehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHH-----hc-------cHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 34455555555556667766555444444444433332211 11 2333455667778887777776666
Q ss_pred hcc-CCCHHH
Q 014329 159 AAG-ELPDRY 167 (426)
Q Consensus 159 la~-~fp~~~ 167 (426)
... .+|++.
T Consensus 75 ~~~~~~~~~~ 84 (141)
T TIGR00880 75 LIADIYPPEE 84 (141)
T ss_pred HHHHHCChhh
Confidence 654 466554
No 185
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=69.26 E-value=25 Score=36.91 Aligned_cols=113 Identities=15% Similarity=0.003 Sum_probs=77.9
Q ss_pred CchHHHHHHHHHHhhhhhhhhhhhhhh-cccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhh
Q 014329 305 KDWYGIILIAGYNVFDLVGKSLTAIYL-LENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLT 383 (426)
Q Consensus 305 ~~w~~~~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~ 383 (426)
++|.....-.+|.+|..+|-.+..... ...||.++..+.+ +.+..=+.+.. -++.+.++++-++-|+..+=..
T Consensus 116 ~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~--~~~i~~~~~a~----a~~~~~~~~~Rfl~G~~~~~~~ 189 (521)
T KOG0255|consen 116 SSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLL--LFIIFGILTAF----APNYWMFLIFRFLSGFFGSGPL 189 (521)
T ss_pred cHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHH--HHHHHHHHHHH----hCcHHHHHHHHHHHHhhccchh
Confidence 456677778899999999977753222 2456665554442 22111122222 2344667888899999999888
Q ss_pred hheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHHHH
Q 014329 384 SVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVAWF 423 (426)
Q Consensus 384 t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s~~ 423 (426)
+.+..+..+-+.+++|..++.+..+....|...-...+++
T Consensus 190 ~~~~~~~~E~~~~~~R~~~~~~~~~~~~~~~~~~~~~a~~ 229 (521)
T KOG0255|consen 190 TVGFGLVAEIVSPKQRGLALTLGGFFFVGGLMLPAGAAYI 229 (521)
T ss_pred HHhHhhheeecCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999777777777666666654
No 186
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=68.83 E-value=1.5e+02 Score=33.10 Aligned_cols=303 Identities=17% Similarity=0.170 Sum_probs=138.5
Q ss_pred HHHHhhhhhHHHHHHhchhHhhccccCCC-ccchhhHHHHHHHHHHHHHHHHHhhcCCCcceEeh-hHHHHHHHHHHHHh
Q 014329 41 YFTLGLGFLLPWNAFITAVDYFSYLYPEA-SVDRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRIN-VGLGLFVVALLVVP 118 (426)
Q Consensus 41 f~llGi~~L~pwN~~ita~dyf~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~-~~l~~~~v~~i~i~ 118 (426)
.+..|+.. --.|..||-. .++|+=+ +-.-.+...|-+.+++.......++.|.. |.|++ .|.+++.+..++..
T Consensus 106 ~~~q~l~~-~y~~s~Itti---ErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~H-rPr~Ig~G~~~m~lgsll~a 180 (735)
T KOG3626|consen 106 AFAQGLYV-GYFNSVITTI---ERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGH-RPRWIGIGLVLMGLGSLLFA 180 (735)
T ss_pred HHHHHhhh-hhhhhhhhhh---hhhcCCCCCcceeEeeecccchhhhhHhHHHhccccC-ccceeeechhHHHHHHHHHh
Confidence 34444444 3345555544 3444322 12345566777788877777777766643 44544 56666654433322
Q ss_pred hhhhee-------------eccc---------------------------CCcchhhHHHHHHHHHhhhhhhhhhhhhhh
Q 014329 119 VMDAVY-------------IKGR---------------------------VGLYDGFTVTVGAVALSGLADALVQGGLIG 158 (426)
Q Consensus 119 ~~~~~~-------------~~~~---------------------------~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~ 158 (426)
+-++.. ...+ ......+.+.++.-++.|++.+-.+.--..
T Consensus 181 lPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGis 260 (735)
T KOG3626|consen 181 LPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGIS 260 (735)
T ss_pred ChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCc
Confidence 211100 0000 011113445555667778887777765555
Q ss_pred hccCCC-----HHHHHHHHhccccccccchhHHHHHHHHH-HHHh--c--c---cCccccchhHHHH--HHHHHHHHHHH
Q 014329 159 AAGELP-----DRYMQALVAGTAGSALLSAGVLVSVLRIL-TKAV--Y--T---QDAIGLRKSANLY--FAVGIVVMVIC 223 (426)
Q Consensus 159 la~~fp-----~~~~~a~~~G~g~a~~~~~Gv~~s~l~ii-~~~~--~--~---~~~~~~~~sa~~y--F~i~~~~~~~~ 223 (426)
+.=-+- |-|.+.+.+-..++ =+++.++-=+ .+.- . + -++.++++-..+. |+++..+.+++
T Consensus 261 YiDDnvk~~~SplYlgi~~~~~~lG-----PaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~ 335 (735)
T KOG3626|consen 261 YIDDNVKKKNSPLYLGILYSMAILG-----PAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFS 335 (735)
T ss_pred cccccccccCCcHHHHHHHHHHHhh-----hHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHH
Confidence 544332 34555444333333 2222111111 1111 1 1 1234455543333 88888888888
Q ss_pred HHHHHHhhcc-hhhHHHHhhhhhhhhhhhhhcc-CCCCcccc---chHHHHHHHHH---HHHHHHHHHHhhhhcccccee
Q 014329 224 IVFYNVAHRL-PVIKYHEDLKIQAVNEEKEEKG-SLTGSMWR---SAVWHIVGRVK---WYGFGILLIYIVTLSIFPGYI 295 (426)
Q Consensus 224 ~~~~~~l~k~-p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~v~k~i~---~~~l~~fl~f~vTl~vFP~i~ 295 (426)
.+-++.++|. |-.+...+.++.+ ..++|++ ..+..+.. .++.+.+|++. .++..+ +.-.+...++-|..
T Consensus 336 a~p~f~fPk~lp~~~~~~~~~~~~--~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~-l~~~~~~~~~~G~~ 412 (735)
T KOG3626|consen 336 AVPLFFFPKELPKSQKRKRARDLH--VLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVV-LASVIESLAITGYI 412 (735)
T ss_pred HHHHHhCcccCccccccchhhhhc--ccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHH-HHHHHHHHHHhhHH
Confidence 8888888776 3222111111111 0011111 11111111 23333444333 222222 22223344444443
Q ss_pred eeccc---c--cC---CCc-hHHHHHHHHHHhhhhhhhhhhhhhhccc---chhHHHHHHHHHHH-Hhhhhc-cc
Q 014329 296 TEDVH---S--EI---LKD-WYGIILIAGYNVFDLVGKSLTAIYLLEN---EKVAIGGCFARLLF-FPLFLG-CL 356 (426)
Q Consensus 296 ~~~~~---~--~~---~~~-w~~~~~~~~FnvgD~iGR~~~~~~~~~~---~~~l~~~s~~R~~f-iPlf~~-c~ 356 (426)
+..++ . .. ..+ +.-.+.+..+.+|=++|-.+-...++.. .++..+.+++=+++ +++|++ |.
T Consensus 413 tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~~~~~~~igC~ 487 (735)
T KOG3626|consen 413 TFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLFYSLLFFIGCE 487 (735)
T ss_pred HhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHHHHHHHEecCC
Confidence 32111 1 11 112 2335667788899999988876666532 24445555655555 776553 53
No 187
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=67.90 E-value=1.6e+02 Score=30.79 Aligned_cols=84 Identities=13% Similarity=0.015 Sum_probs=51.9
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhh
Q 014329 74 IFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQ 153 (426)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q 153 (426)
.....+.+...++.++.-.+..++..|.=...++++.+++-+...+ .+ .+..-++.=++.|++.+-..
T Consensus 122 ~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~-----a~-------~~~~~~~~Rfl~G~~~~~~~ 189 (521)
T KOG0255|consen 122 LGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAF-----AP-------NYWMFLIFRFLSGFFGSGPL 189 (521)
T ss_pred HHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHH-----hC-------cHHHHHHHHHHHHhhccchh
Confidence 3445566666666666655666655555556666666665543322 11 34445667778888877777
Q ss_pred hhhhhhcc-CCCHHHHH
Q 014329 154 GGLIGAAG-ELPDRYMQ 169 (426)
Q Consensus 154 ~s~~~la~-~fp~~~~~ 169 (426)
...+++.+ .+++++-+
T Consensus 190 ~~~~~~~~E~~~~~~R~ 206 (521)
T KOG0255|consen 190 TVGFGLVAEIVSPKQRG 206 (521)
T ss_pred HHhHhhheeecCcchhh
Confidence 77777776 57777643
No 188
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=67.54 E-value=1.6e+02 Score=30.83 Aligned_cols=140 Identities=12% Similarity=0.123 Sum_probs=73.0
Q ss_pred hhhHHHHHHhhhhhHHHHHHhchhHhhccc-cCCC--cc---chhhHHHHHHHHHHHHHHH----HHhhcC---CCcceE
Q 014329 36 LAYIIYFTLGLGFLLPWNAFITAVDYFSYL-YPEA--SV---DRIFAVAYMLVGLFCLVII----VFYAHK---SDAWVR 102 (426)
Q Consensus 36 ~~y~~f~llGi~~L~pwN~~ita~dyf~~~-~~~~--~~---~~~~~~~~~~~~l~~~l~~----~~~~~~---~s~~~R 102 (426)
..++.+++..+..-..|+-.-+....|.++ .+.+ .+ ...+.....+..++.+-.. .++.+| .+...|
T Consensus 272 ~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k 351 (475)
T TIGR00924 272 YAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLK 351 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHH
Confidence 345556666666666666666654444433 2221 11 1122222222222222121 133443 234446
Q ss_pred ehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhccCC-CHH----HHHHHHhcccc
Q 014329 103 INVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAGEL-PDR----YMQALVAGTAG 177 (426)
Q Consensus 103 i~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~~f-p~~----~~~a~~~G~g~ 177 (426)
+..|.++..+++....+... ..+ + +....++..+...++.+++-.+......++.+.. |++ +++.+..++++
T Consensus 352 ~~~G~~l~~~~~~~~~~~~~-~~~-~-~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~ 428 (475)
T TIGR00924 352 FTLGMLFCGASFLTFAASIW-FAD-A-GGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAM 428 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHh-hcC-C-CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 78888888777765543211 111 1 1223555566777889999999999999988865 554 34444445555
Q ss_pred c
Q 014329 178 S 178 (426)
Q Consensus 178 a 178 (426)
+
T Consensus 429 g 429 (475)
T TIGR00924 429 G 429 (475)
T ss_pred H
Confidence 5
No 189
>PRK03699 putative transporter; Provisional
Probab=67.23 E-value=1.4e+02 Score=29.84 Aligned_cols=44 Identities=9% Similarity=0.037 Sum_probs=24.0
Q ss_pred hhHhhccccCCCc-cchhhHHHHHHHHHHHHHHHHHhhcCCCcce
Q 014329 58 AVDYFSYLYPEAS-VDRIFAVAYMLVGLFCLVIIVFYAHKSDAWV 101 (426)
Q Consensus 58 a~dyf~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~ 101 (426)
...|.++.+.-+. -...+...+.....+..++.-.+.+|++.+.
T Consensus 228 ~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~ 272 (394)
T PRK03699 228 VPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQR 272 (394)
T ss_pred HHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhh
Confidence 3466755443221 1223334455566666777667777776653
No 190
>PRK10429 melibiose:sodium symporter; Provisional
Probab=67.05 E-value=1.6e+02 Score=30.48 Aligned_cols=55 Identities=15% Similarity=0.148 Sum_probs=29.7
Q ss_pred hHHHHHHHHhhhcchhhhheeeecCCCCChhh----H---HHHhHHHHHHHHHHHHHHHHHH
Q 014329 367 PVTLLTCLLGLTNGYLTSVLMILAPKVVQLQH----A---ETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 367 ~~~il~~lfglTnGyl~t~~mi~ap~~v~~~e----r---e~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
..++..++.|+..|-........-++.++.+| | ...-...++..-+|..+|..+.
T Consensus 326 ~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~ 387 (473)
T PRK10429 326 LIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFI 387 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 34455566777777666554444455554322 2 1234455566667776665543
No 191
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=65.50 E-value=33 Score=35.26 Aligned_cols=111 Identities=12% Similarity=0.075 Sum_probs=67.8
Q ss_pred HHHHHHHHhhhhhhhhhhhhhh-cccchhHHHHHHHHHHHHhhhhccccC--------CCccccchhHHHHHHHHhhhcc
Q 014329 310 IILIAGYNVFDLVGKSLTAIYL-LENEKVAIGGCFARLLFFPLFLGCLHG--------PKFFRTEIPVTLLTCLLGLTNG 380 (426)
Q Consensus 310 ~~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~~s~~R~~fiPlf~~c~~~--------p~~~~~d~~~~il~~lfglTnG 380 (426)
-.....|++|=.+|-.+..+.. +..+|+.+.... +++..-.+.+... +....+....++.=++.|+..|
T Consensus 58 ~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~--~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g 135 (479)
T PRK10077 58 GFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAA--VLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVG 135 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH--HHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHh
Confidence 3566777887777766654332 245565544333 1222111111110 0001111223455578899999
Q ss_pred hhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHHH
Q 014329 381 YLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVAW 422 (426)
Q Consensus 381 yl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s~ 422 (426)
-....++.+..+..++++|..+..+.......|..++..++.
T Consensus 136 ~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~ 177 (479)
T PRK10077 136 LASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNY 177 (479)
T ss_pred HHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999989888889899999999998888888888877766543
No 192
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=65.17 E-value=54 Score=33.46 Aligned_cols=55 Identities=15% Similarity=0.027 Sum_probs=40.0
Q ss_pred hHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 367 PVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 367 ~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
...+.-++.|+..|-....+..+..+..++++|..+..+.......|..+|..+.
T Consensus 126 ~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~ 180 (432)
T PRK10406 126 LLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVV 180 (432)
T ss_pred HHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666889988876666777777777788888887777777777777776543
No 193
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=64.60 E-value=1.7e+02 Score=30.74 Aligned_cols=82 Identities=10% Similarity=0.065 Sum_probs=57.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhh
Q 014329 73 RIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALV 152 (426)
Q Consensus 73 ~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~ 152 (426)
..+...+.+.+.+..++.-++.+++..|.-+..+.++.++..++.... + .+...++.=++.|++.|..
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a-----~-------~~~~l~~GR~l~G~g~G~~ 159 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALA-----P-------SWYQLIVGRILTGLGVGGA 159 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-----h-------hHHHHHHHHHHhccchhhh
Confidence 578888889999999888888888888888888887777766554321 1 2233455667778887777
Q ss_pred hhhhhhhccCCCHH
Q 014329 153 QGGLIGAAGELPDR 166 (426)
Q Consensus 153 q~s~~~la~~fp~~ 166 (426)
+...--+.+-..|+
T Consensus 160 ~~~~piy~sEiap~ 173 (513)
T KOG0254|consen 160 SVLAPVYISEIAPA 173 (513)
T ss_pred hhcchhhHhhcCCh
Confidence 76666666655554
No 194
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=64.58 E-value=20 Score=36.27 Aligned_cols=53 Identities=9% Similarity=0.066 Sum_probs=43.2
Q ss_pred HHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 369 TLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 369 ~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
++.-++.|+..|......+...|+.+++|||..+-.++......|..+|..++
T Consensus 92 ~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lg 144 (393)
T PRK11195 92 LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLG 144 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34446779999999999999999999999999998888888877777776654
No 195
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=64.05 E-value=64 Score=33.96 Aligned_cols=105 Identities=10% Similarity=-0.123 Sum_probs=53.6
Q ss_pred HHHHHhhhhhhhhhhhhh-hcccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeeecC
Q 014329 313 IAGYNVFDLVGKSLTAIY-LLENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMILAP 391 (426)
Q Consensus 313 ~~~FnvgD~iGR~~~~~~-~~~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ap 391 (426)
..++.++=-++|....+. .+..+|+....+.+ +..+|.+......+...++.+...++-++.|+..+ .-..++-...
T Consensus 76 ~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~l-l~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gigg~-~f~~~~~~vs 153 (462)
T PRK15034 76 TALPSVSGALLRVPYSFMVPIFGGRRWTVFSTA-ILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFAGA-NFASSMGNIS 153 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHH-HHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHHHH-hHHHHHHHHH
Confidence 444555555666664332 23455654433332 23455544332111122444556777778888744 3334555555
Q ss_pred CCCChhhHHHHhHHHHHHHHHHHHHHHH
Q 014329 392 KVVQLQHAETAGIVIVLFLVLGLAAGSI 419 (426)
Q Consensus 392 ~~v~~~ere~ag~~~~~~l~~Gl~~Gs~ 419 (426)
+.-+++||..|-.+..-.-+.|..++..
T Consensus 154 ~wfp~~~rG~A~Gi~~g~G~~G~~l~~~ 181 (462)
T PRK15034 154 FFFPKAKQGSALGINGGLGNLGVSVMQL 181 (462)
T ss_pred HHCCHhHhHHHHHHHHHHHhhHHHHHHH
Confidence 5667777887766664444445444433
No 196
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=64.00 E-value=1.4e+02 Score=31.39 Aligned_cols=69 Identities=10% Similarity=0.115 Sum_probs=39.3
Q ss_pred CcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhcc-CCCHHHH
Q 014329 98 DAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAG-ELPDRYM 168 (426)
Q Consensus 98 s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~-~fp~~~~ 168 (426)
+...|+..|+++..+++....+....+.+. +.....+.....-++.|++-++.....++.+. .-|+++.
T Consensus 344 ~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~--~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~ 413 (489)
T PRK10207 344 SMPMKFTLGMFLCSLGFLTAAAAGMWFADA--QGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLM 413 (489)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhcCC--CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHH
Confidence 344468888888776665432211111111 11223344456677788888888888777775 4566663
No 197
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=63.88 E-value=2e+02 Score=30.49 Aligned_cols=131 Identities=10% Similarity=0.148 Sum_probs=72.7
Q ss_pred chhhhHHHHHHhhhhhHHHHHHhchhHhhccccCCCcc------chhhHHHHHHHHHHHH-HHH---HHhh--c-CCCcc
Q 014329 34 FHLAYIIYFTLGLGFLLPWNAFITAVDYFSYLYPEASV------DRIFAVAYMLVGLFCL-VII---VFYA--H-KSDAW 100 (426)
Q Consensus 34 ~~~~y~~f~llGi~~L~pwN~~ita~dyf~~~~~~~~~------~~~~~~~~~~~~l~~~-l~~---~~~~--~-~~s~~ 100 (426)
+..+++.+++.++..-.-|+=.-+....|.++.-|.++ ..++...+-+..++.. ++. .+.. + +.+..
T Consensus 266 r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~ 345 (493)
T PRK15462 266 ELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIW 345 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcH
Confidence 33677887888777777777777777777765543331 2222222222122111 111 1221 1 23455
Q ss_pred eEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhccCCCHHH
Q 014329 101 VRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAGELPDRY 167 (426)
Q Consensus 101 ~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~~fp~~~ 167 (426)
.+...|+++..+++.++.+... ..+ +.+ ....+..+...++.+++-=......+++.+..-|+-
T Consensus 346 ~Kfa~g~~~~g~~f~~l~~~~~-~~~-~~~-~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~ 409 (493)
T PRK15462 346 GKFALGLGLMSAGFCILTLSAR-WSA-MYG-HSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPG 409 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-hcC-CCC-CcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHH
Confidence 6688888888888776654322 122 112 234444556666778888888888888887655543
No 198
>PRK15011 sugar efflux transporter B; Provisional
Probab=63.85 E-value=1.6e+02 Score=29.40 Aligned_cols=20 Identities=10% Similarity=0.194 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHhhcCCCcc
Q 014329 81 LVGLFCLVIIVFYAHKSDAW 100 (426)
Q Consensus 81 ~~~l~~~l~~~~~~~~~s~~ 100 (426)
...++...+.-++.+|+..+
T Consensus 263 ~~~i~~~~~~G~l~dr~g~~ 282 (393)
T PRK15011 263 GLEIPTMLIAGYFAKRLGKR 282 (393)
T ss_pred HHHHHHHHHHHHHHHHhChH
Confidence 33444445555566666554
No 199
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=62.48 E-value=1.4e+02 Score=29.79 Aligned_cols=73 Identities=8% Similarity=-0.004 Sum_probs=36.2
Q ss_pred HHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhccC
Q 014329 83 GLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAGE 162 (426)
Q Consensus 83 ~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~~ 162 (426)
..+......++.+|++.+..+..+.++..+..+.... .+ . .+.......+.|++....+.....+...
T Consensus 267 ~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~-----~~----~---~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 334 (396)
T TIGR00882 267 NALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSF-----AT----T---ALEVVILKMLHAFEVPFLLVGCFKYITS 334 (396)
T ss_pred HHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh-----cC----C---hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444556777777665555555554443332211 11 1 1112334455666666666655555543
Q ss_pred -CCHHH
Q 014329 163 -LPDRY 167 (426)
Q Consensus 163 -fp~~~ 167 (426)
.|++.
T Consensus 335 ~~~~~~ 340 (396)
T TIGR00882 335 QFDVRL 340 (396)
T ss_pred hCCcce
Confidence 55554
No 200
>PRK03893 putative sialic acid transporter; Provisional
Probab=61.32 E-value=71 Score=32.99 Aligned_cols=105 Identities=12% Similarity=0.015 Sum_probs=57.7
Q ss_pred HHHHHHHhhhhhhhhhhhhhh-cccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeee
Q 014329 311 ILIAGYNVFDLVGKSLTAIYL-LENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMIL 389 (426)
Q Consensus 311 ~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ 389 (426)
.....+.++-.+|.....+.. +..+|+.+.... ++.....+.+.. -++.+..++..++.|+..|-.......+
T Consensus 59 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~--~~~~~~~~~~~~----~~~~~~l~~~~~l~G~~~~~~~~~~~~~ 132 (496)
T PRK03893 59 SLISAAFISRWFGGLLLGAMGDRYGRRLAMVISI--VLFSVGTLACGF----APGYWTLFIARLVIGMGMAGEYGSSATY 132 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH--HHHHHHHHHHHH----HhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566666666665543322 234455433222 222111111111 1223445666777888777655555555
Q ss_pred cCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 390 APKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 390 ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
..+..++++|..+-.+......+|-.+|..++
T Consensus 133 ~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 164 (496)
T PRK03893 133 VIESWPKHLRNKASGFLISGFSIGAVVAAQVY 164 (496)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66777788888877777777777777766554
No 201
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=60.60 E-value=1.1e+02 Score=31.28 Aligned_cols=80 Identities=14% Similarity=0.023 Sum_probs=44.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhh
Q 014329 75 FAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQG 154 (426)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~ 154 (426)
+...+.....+..++...+.+|++.+.-+..+.++.++..++.+. .+ +. ..+....+.|.+.+..-.
T Consensus 274 ~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~-----~~---~~-----~~~~~l~~~glf~s~~fp 340 (410)
T TIGR00885 274 YNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIF-----AG---GH-----VGLYCLTLCSAFMSLMFP 340 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH-----cC---Ch-----HHHHHHHHHHHHHHHHHH
Confidence 333445556666777777777776554343444444443333222 11 11 134556667777777778
Q ss_pred hhhhhccC-CCHHH
Q 014329 155 GLIGAAGE-LPDRY 167 (426)
Q Consensus 155 s~~~la~~-fp~~~ 167 (426)
++++++-. ++++.
T Consensus 341 ~i~sl~~~~~g~~~ 354 (410)
T TIGR00885 341 TIYGIALKGLGQDT 354 (410)
T ss_pred HHHHHHHhhhhhhh
Confidence 99999886 44443
No 202
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=59.07 E-value=78 Score=32.80 Aligned_cols=36 Identities=11% Similarity=0.031 Sum_probs=23.2
Q ss_pred cccchhHHHHHHHHhhhcchhhhheeeecCCCCChh
Q 014329 362 FRTEIPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQ 397 (426)
Q Consensus 362 ~~~d~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ 397 (426)
.++.+...++..+.|++=+.+-.-.|-|-.+..+++
T Consensus 309 ~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~r 344 (412)
T PF01306_consen 309 ATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKR 344 (412)
T ss_dssp --SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GG
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHh
Confidence 344466777888888888877777777765554443
No 203
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=58.51 E-value=1.2e+02 Score=31.44 Aligned_cols=117 Identities=13% Similarity=0.071 Sum_probs=67.5
Q ss_pred hhhHHHHHHhhhhhHHHHHHhchhHhhccccCCCccchhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHH
Q 014329 36 LAYIIYFTLGLGFLLPWNAFITAVDYFSYLYPEASVDRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALL 115 (426)
Q Consensus 36 ~~y~~f~llGi~~L~pwN~~ita~dyf~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i 115 (426)
.+...|+..|+= ..-|+.+.+-....+ =.++.....+...+...-.+..++...+.+|++...-....-++.++.++
T Consensus 241 gvl~~FlYVG~E-va~gsfl~~y~~~~~--g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~ 317 (422)
T COG0738 241 GVLAIFLYVGAE-VAIGSFLVSYLEELL--GLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLL 317 (422)
T ss_pred HHHHHHHHHhHH-HHHHHHHHHHHHhcC--CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 445677777864 344888777442221 11223344555566666666676666677776654433333222222222
Q ss_pred HHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhccC-CCHHHHH
Q 014329 116 VVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAGE-LPDRYMQ 169 (426)
Q Consensus 116 ~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~~-fp~~~~~ 169 (426)
.. ..++ + .+.+..+.++|..++.+-.++++++-. +| +.++
T Consensus 318 ~~-----~l~~---g-----~v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts 358 (422)
T COG0738 318 AV-----ALIG---G-----VVALYALFLIGLFNSIMFPTIFSLALKNLG-EHTS 358 (422)
T ss_pred HH-----HHhc---C-----hHHHHHHHHHHHHhHHHHHHHHHHHHhccC-cccc
Confidence 22 1222 1 345567788999999999999999985 55 5543
No 204
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=57.99 E-value=1.3e+02 Score=29.35 Aligned_cols=106 Identities=16% Similarity=0.211 Sum_probs=48.9
Q ss_pred chHHHHHHHHHHhhhhhhhhhhhhhhcc--cchhHHHHH-HHHHHHHhhhhcccc--CCCccccchhHHHHHHHHhhhcc
Q 014329 306 DWYGIILIAGYNVFDLVGKSLTAIYLLE--NEKVAIGGC-FARLLFFPLFLGCLH--GPKFFRTEIPVTLLTCLLGLTNG 380 (426)
Q Consensus 306 ~w~~~~~~~~FnvgD~iGR~~~~~~~~~--~~~~l~~~s-~~R~~fiPlf~~c~~--~p~~~~~d~~~~il~~lfglTnG 380 (426)
+|...+..-+|..|=++|-..-..+... +||+..... .+-.++..+-.+|.+ +|. + ..-.-.+.++|+-.|
T Consensus 140 ~~~~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~---~-~~~~~~f~I~~Fl~G 215 (267)
T PF07672_consen 140 NWIIPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPG---N-AAGFAFFYIFGFLAG 215 (267)
T ss_pred chhhHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcc---h-HHHHHHHHHHHHHHH
Confidence 3544455557778888885554433332 333332211 122344444444432 222 2 111223555666555
Q ss_pred hhh---hheeeecCCCCChhhHHHHhHHHHHHHHHHHH
Q 014329 381 YLT---SVLMILAPKVVQLQHAETAGIVIVLFLVLGLA 415 (426)
Q Consensus 381 yl~---t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~ 415 (426)
.+. --.+-+-|..-++.+.+..|.+-++.=.+|-.
T Consensus 216 ~f~WgiQ~ViL~lPhEyK~~~pk~ig~~Fg~iWGfGY~ 253 (267)
T PF07672_consen 216 FFLWGIQGVILNLPHEYKGYNPKKIGIQFGLIWGFGYI 253 (267)
T ss_pred HHHHhhhHHHhcChhhhcCCCcceehhHHHHHHHHHHH
Confidence 543 11222335544444555666666655555543
No 205
>TIGR00901 2A0125 AmpG-related permease.
Probab=57.23 E-value=49 Score=32.47 Aligned_cols=56 Identities=9% Similarity=0.068 Sum_probs=39.2
Q ss_pred HHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHHHH
Q 014329 368 VTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVAWF 423 (426)
Q Consensus 368 ~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s~~ 423 (426)
...+.++.++..+........+.++..++|+|..+..+......+|..+|..++..
T Consensus 86 l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~ 141 (356)
T TIGR00901 86 LAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALV 141 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444554444444444466888888999999999999999999988887743
No 206
>PRK15075 citrate-proton symporter; Provisional
Probab=55.52 E-value=1.2e+02 Score=30.93 Aligned_cols=53 Identities=8% Similarity=-0.003 Sum_probs=35.6
Q ss_pred HHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHH
Q 014329 369 TLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVA 421 (426)
Q Consensus 369 ~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s 421 (426)
++.-++.|+..|-.......+..+..++++|..+..+.......|..+|..++
T Consensus 121 ~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g 173 (434)
T PRK15075 121 LLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLG 173 (434)
T ss_pred HHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 44456778877766555556777888888888887776666555555544443
No 207
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=54.52 E-value=2.9e+02 Score=29.23 Aligned_cols=90 Identities=11% Similarity=-0.031 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCcceEe-hhHHHHHHHHHHHHhhhhheeecc-c-------CCcchh-hHHHHHHHHHh
Q 014329 76 AVAYMLVGLFCLVIIVFYAHKSDAWVRI-NVGLGLFVVALLVVPVMDAVYIKG-R-------VGLYDG-FTVTVGAVALS 145 (426)
Q Consensus 76 ~~~~~~~~l~~~l~~~~~~~~~s~~~Ri-~~~l~~~~v~~i~i~~~~~~~~~~-~-------~~~~~~-f~~~l~~v~~~ 145 (426)
...+.+.+.+.+++..++.|++..+.|. ..++++..++++.+.++..+-.+. . ...... =+..+++....
T Consensus 311 l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 390 (477)
T TIGR01301 311 LMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAIL 390 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHh
Confidence 3556666667777777888887765666 577777787777765543210000 0 000011 14566778889
Q ss_pred hhhhhhhhhhhhhhccCCCH
Q 014329 146 GLADALVQGGLIGAAGELPD 165 (426)
Q Consensus 146 g~~~~~~q~s~~~la~~fp~ 165 (426)
|+.-+...+-=|++.+..-+
T Consensus 391 Gi~~A~~~siPfal~s~~~~ 410 (477)
T TIGR01301 391 GIPLAITYSIPFALASIRSS 410 (477)
T ss_pred hHHHHHHHHHhHHHHHHHcc
Confidence 99999999999999987555
No 208
>PRK11462 putative transporter; Provisional
Probab=53.76 E-value=2.8e+02 Score=28.80 Aligned_cols=40 Identities=10% Similarity=-0.027 Sum_probs=21.2
Q ss_pred HHHHHHhhhhhhhhhhhhhhhccCCCHH------HHHHHHhccccc
Q 014329 139 VGAVALSGLADALVQGGLIGAAGELPDR------YMQALVAGTAGS 178 (426)
Q Consensus 139 l~~v~~~g~~~~~~q~s~~~la~~fp~~------~~~a~~~G~g~a 178 (426)
.+.-.+...+-+..+-...++.+.+.++ ....-+.|..++
T Consensus 113 ~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG 158 (460)
T PRK11462 113 AITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAG 158 (460)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence 3333344666666666666666655442 233344555555
No 209
>PTZ00207 hypothetical protein; Provisional
Probab=53.05 E-value=2.8e+02 Score=30.22 Aligned_cols=24 Identities=4% Similarity=0.115 Sum_probs=13.1
Q ss_pred HHHHhhhhhhhhhhhhhhhcc-CCC
Q 014329 141 AVALSGLADALVQGGLIGAAG-ELP 164 (426)
Q Consensus 141 ~v~~~g~~~~~~q~s~~~la~-~fp 164 (426)
..++.|++.|..-+.....++ +|+
T Consensus 458 ~~~lvg~~~G~~~~~~~~i~selFg 482 (591)
T PTZ00207 458 PYFIAAFANGFMAATIALVTRTIFA 482 (591)
T ss_pred HHHHHHHHhhHhHHHHHHHHHHHhc
Confidence 444556666665555555544 455
No 210
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=52.94 E-value=3.6 Score=42.10 Aligned_cols=114 Identities=17% Similarity=0.180 Sum_probs=76.4
Q ss_pred hHHHHHHHHHHhhhhhhhhhhhhhh-cccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhh
Q 014329 307 WYGIILIAGYNVFDLVGKSLTAIYL-LENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSV 385 (426)
Q Consensus 307 w~~~~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~ 385 (426)
+..-.....+.+|-.+|-.+..... +..+|+.+..+. ++.+.--+.+...|.. .+.+...+.-++.|+.+|-....
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~--~~~~i~~~~~~~~~~~-~~~~~~~~~R~~~G~~~g~~~~~ 122 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISA--LLMIIGSILIAFAPSY-NNFWMLLIGRFLIGFGIGGAYVV 122 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccccccccccccc--cccccccccccccccc-ccccccccccccccccccccccc
Confidence 3445667788888889888765433 345555443332 1111111111111211 24455666778899999999999
Q ss_pred eeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHHHH
Q 014329 386 LMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVAWF 423 (426)
Q Consensus 386 ~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s~~ 423 (426)
..+|..|..+++.|.....+...+..+|..+|..++..
T Consensus 123 ~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~ 160 (451)
T PF00083_consen 123 SPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYI 160 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999888877653
No 211
>PF13038 DUF3899: Domain of unknown function (DUF3899)
Probab=50.65 E-value=60 Score=25.79 Aligned_cols=19 Identities=11% Similarity=-0.022 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 014329 267 WHIVGRVKWYGFGILLIYI 285 (426)
Q Consensus 267 ~~v~k~i~~~~l~~fl~f~ 285 (426)
.++.+..++..+...+...
T Consensus 66 ~~~~~~~~~~ll~~~ll~l 84 (92)
T PF13038_consen 66 YRVSRWTYPLLLIGLLLIL 84 (92)
T ss_pred hHhHHHHHHHHHHHHHHHH
Confidence 3455555555555544333
No 212
>PRK11043 putative transporter; Provisional
Probab=49.18 E-value=1.4e+02 Score=29.81 Aligned_cols=133 Identities=14% Similarity=0.016 Sum_probs=55.9
Q ss_pred HHHHHhhhhccccceeeecccccCCCchHHHHHHHHHHhhhhhhhhhhhhhh-cccchhHHHHHHHHHHHHhhhhccccC
Q 014329 280 ILLIYIVTLSIFPGYITEDVHSEILKDWYGIILIAGYNVFDLVGKSLTAIYL-LENEKVAIGGCFARLLFFPLFLGCLHG 358 (426)
Q Consensus 280 ~fl~f~vTl~vFP~i~~~~~~~~~~~~w~~~~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~~s~~R~~fiPlf~~c~~~ 358 (426)
.++.|+.+-...|.+ ....+....++...-....++.++-.+|.....+.. +.++|+.+.... ++.....+.+...
T Consensus 15 ~~~~~~~~~~~~p~~-~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~--~~~~~~~~~~~~~ 91 (401)
T PRK11043 15 SMLGFLATDMYLPAF-KAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGL--SLFALGSLGMLWV 91 (401)
T ss_pred HHHHHHHHHHHHhhH-HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHH--HHHHHHHHHHHHh
Confidence 344455555555654 211111111222233445566666667766654332 234555443322 1121111111111
Q ss_pred CCccccchhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHH
Q 014329 359 PKFFRTEIPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSI 419 (426)
Q Consensus 359 p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~ 419 (426)
++.+..++..++.|+..|...........+..+++++..+-........+|..+|..
T Consensus 92 ----~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 148 (401)
T PRK11043 92 ----ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPL 148 (401)
T ss_pred ----cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222444555667777665544433333445555554443333333333344444433
No 213
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=48.95 E-value=1.2e+02 Score=26.91 Aligned_cols=110 Identities=13% Similarity=0.102 Sum_probs=61.8
Q ss_pred CchHHHHHHHHHHhhhhhhhhhhhhhhcccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhh
Q 014329 305 KDWYGIILIAGYNVFDLVGKSLTAIYLLENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTS 384 (426)
Q Consensus 305 ~~w~~~~~~~~FnvgD~iGR~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t 384 (426)
+.....++...|.++-+++ |....+-.+|+.+++.. +..+++..++..| +.+..++--++.|+.-+.+-+
T Consensus 39 G~~slai~Y~~~~~s~l~~---P~iv~~lg~K~sm~lg~---~~y~~y~~~~~~~----~~~~l~~~s~l~G~~~a~lW~ 108 (156)
T PF05978_consen 39 GYYSLAILYGSFAISCLFA---PSIVNKLGPKWSMILGS---LGYAIYIASFFYP----NSYTLYPASALLGFGAALLWT 108 (156)
T ss_pred cHHHHHHHHHHHHHHHHhH---HHHHHHHhhHHHHHHHH---HHHHHHHHHHHhh----hHHHHHHHHHHHhhhhHHhhH
Confidence 3445567777777877775 33444445666554433 3334555555433 235566666778887776655
Q ss_pred heeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHHHHh
Q 014329 385 VLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVAWFW 424 (426)
Q Consensus 385 ~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s~~~ 424 (426)
---.+-.+..++++|+.--.+-.-....++..|.+..++.
T Consensus 109 aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 109 AQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred hhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4333333333455555544444444456788888777653
No 214
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=48.65 E-value=1.1e+02 Score=31.84 Aligned_cols=84 Identities=15% Similarity=-0.052 Sum_probs=50.6
Q ss_pred ccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeeecCCCC-ChhhHHHHhHHHHHHHH
Q 014329 333 ENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMILAPKVV-QLQHAETAGIVIVLFLV 411 (426)
Q Consensus 333 ~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ap~~v-~~~ere~ag~~~~~~l~ 411 (426)
..+|+.+.... +++..-.+.|... ++.+..++.-++.|+.+|-.....+...++.. ++++|..+-.+......
T Consensus 68 ~Grk~~l~~~~--~~~~~~~~~~~~a----~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~ 141 (495)
T PRK14995 68 IGFKRLLMLGG--TLFGLASLAAAFS----PTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGS 141 (495)
T ss_pred hccHHHHHHHH--HHHHHHHHHHHHc----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 34555544333 3444433444432 23344556667788888776655554444443 56788888888888888
Q ss_pred HHHHHHHHHHH
Q 014329 412 LGLAAGSIVAW 422 (426)
Q Consensus 412 ~Gl~~Gs~~s~ 422 (426)
+|..+|..++-
T Consensus 142 ~g~~~gp~lgg 152 (495)
T PRK14995 142 GGAAFGPLVGG 152 (495)
T ss_pred HHHHHHHHHHH
Confidence 88887777653
No 215
>PF09050 SNN_linker: Stannin unstructured linker; InterPro: IPR015136 This entry represents an unstructured protein region which connects two adjacent stannin helical domains. It contains a conserved CXC metal-binding motif and a putative 14-3-3-zeta binding domain. Upon coordinating dimethytin, considerable structural or dynamic changes in the flexible loop region of SNN may take place, recruiting other binding partners such as 14-3-3-zeta, and thereby initiating the apoptotic cascade []. ; PDB: 1ZZA_A.
Probab=47.97 E-value=17 Score=21.55 Aligned_cols=17 Identities=29% Similarity=0.303 Sum_probs=8.2
Q ss_pred CccCCCCCCCccccccc
Q 014329 3 LSVKPEPGSESESSLLL 19 (426)
Q Consensus 3 ~~~~~~~~~~~~~~~~~ 19 (426)
||...-+.|||||++-.
T Consensus 3 lrlqr~sqsedeesivg 19 (26)
T PF09050_consen 3 LRLQRISQSEDEESIVG 19 (26)
T ss_dssp TSS-SS-SS---TTTTT
T ss_pred ehhhhhccccchhhccc
Confidence 45666778999887754
No 216
>PRK10133 L-fucose transporter; Provisional
Probab=47.20 E-value=3.4e+02 Score=27.90 Aligned_cols=78 Identities=9% Similarity=0.027 Sum_probs=45.6
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhh
Q 014329 75 FAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQG 154 (426)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~ 154 (426)
....+.....+.....-++.+|+..+..+..+..+..+.+... . ..+ +. ..+....+.|++.+....
T Consensus 300 ~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~-~----~~~---~~-----~~~~~~~l~glg~~~i~P 366 (438)
T PRK10133 300 YLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLIS-A----FAG---GH-----VGLIALTLCSAFMSIQYP 366 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH-H----HcC---Ch-----HHHHHHHHHHHHHHHHHH
Confidence 3345666666667777777777665544444433333222221 1 111 11 124456678999999999
Q ss_pred hhhhhccC-CCH
Q 014329 155 GLIGAAGE-LPD 165 (426)
Q Consensus 155 s~~~la~~-fp~ 165 (426)
..++.+.. +|+
T Consensus 367 ~~~s~a~~~~~~ 378 (438)
T PRK10133 367 TIFSLGIKNLGQ 378 (438)
T ss_pred HHHHHHHcccch
Confidence 99999887 554
No 217
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=46.18 E-value=3.2e+02 Score=27.37 Aligned_cols=42 Identities=17% Similarity=0.100 Sum_probs=23.6
Q ss_pred HHHHHhhhhhhhhhhhhhhcccchhHHHHHHHHHHHHhhhhccc
Q 014329 313 IAGYNVFDLVGKSLTAIYLLENEKVAIGGCFARLLFFPLFLGCL 356 (426)
Q Consensus 313 ~~~FnvgD~iGR~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~c~ 356 (426)
..++.+|-.+.|.-. ....+.+.....++.|++..|++....
T Consensus 285 l~l~~lG~~l~~~~~--~~~~~~~~~~~~~~~rlii~P~i~~~~ 326 (385)
T PF03547_consen 285 LALFVLGASLARGPR--KSALGWKPSIIAVLVRLIILPLIGIGI 326 (385)
T ss_pred HHHHHHHHHHhcCCc--ccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 445556655554311 111223334456899999999876543
No 218
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=45.54 E-value=2.7e+02 Score=27.62 Aligned_cols=28 Identities=18% Similarity=0.299 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHhhcCCCcceEehhHHHH
Q 014329 82 VGLFCLVIIVFYAHKSDAWVRINVGLGL 109 (426)
Q Consensus 82 ~~l~~~l~~~~~~~~~s~~~Ri~~~l~~ 109 (426)
..++..++.-++.+|++.+.-+..+..+
T Consensus 256 ~~~~g~~~~g~l~~r~g~~~~l~~~~~~ 283 (390)
T TIGR02718 256 TVLLGCGGGAWLVRRAGLWRTFILGVGL 283 (390)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 3444445555667776654433334433
No 219
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=45.39 E-value=3.9e+02 Score=28.17 Aligned_cols=41 Identities=22% Similarity=0.092 Sum_probs=26.7
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhccCCCHH----HHHHHHhccccc
Q 014329 138 TVGAVALSGLADALVQGGLIGAAGELPDR----YMQALVAGTAGS 178 (426)
Q Consensus 138 ~l~~v~~~g~~~~~~q~s~~~la~~fp~~----~~~a~~~G~g~a 178 (426)
..+..++.|++.|++-.+-=++.+.-+++ -..+.+++-+-+
T Consensus 105 ~yfssallG~Gaallw~GqG~ylt~~st~~tie~Nisi~Wai~~~ 149 (461)
T KOG3098|consen 105 LYFSSALLGFGAALLWTGQGGYLTSNSTRETIERNISIFWAIGQS 149 (461)
T ss_pred HHHHHHHhhhhHHheecccceehhhcCChhhHHHHHHHHHHHHHH
Confidence 45688899999998655544555544433 246677777766
No 220
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=45.36 E-value=67 Score=34.18 Aligned_cols=59 Identities=12% Similarity=0.080 Sum_probs=48.3
Q ss_pred cchhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHHHH
Q 014329 364 TEIPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVAWF 423 (426)
Q Consensus 364 ~d~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s~~ 423 (426)
+.+...+.-+++|+..|-.. ...-+..+.++++||..+..+..-+..+|-++|+.++=+
T Consensus 114 Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql 172 (511)
T TIGR00806 114 SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL 172 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567888899999998777 666677788899999999999999999999888877643
No 221
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=45.04 E-value=2.7e+02 Score=29.64 Aligned_cols=105 Identities=14% Similarity=0.135 Sum_probs=52.2
Q ss_pred HHHHHhhhhhHHHHHHhch----hHhhccccCCCccchhhHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHH
Q 014329 40 IYFTLGLGFLLPWNAFITA----VDYFSYLYPEASVDRIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALL 115 (426)
Q Consensus 40 ~f~llGi~~L~pwN~~ita----~dyf~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i 115 (426)
.|.++.++.++..-.+... .+|-+++.-+++-...........+.+..++.-.+..+-..+.+....+.+.+..+.
T Consensus 299 ~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~ 378 (509)
T KOG2504|consen 299 KFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLA 378 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHH
Confidence 4555555555544444443 344443222222223334456777888888777777776655555544433332222
Q ss_pred --HHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhh
Q 014329 116 --VVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGL 156 (426)
Q Consensus 116 --~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~ 156 (426)
..|. ...|+..+...++.|++.|...+-.
T Consensus 379 ~~~~p~------------~~~~~~l~~~~~~fG~~~g~~~~l~ 409 (509)
T KOG2504|consen 379 RLFLPF------------ATTYVGLIVFSILFGFCVGSFSSLT 409 (509)
T ss_pred HHHHHH------------hccHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222 1133445555666666655554433
No 222
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=44.14 E-value=3.4e+02 Score=27.13 Aligned_cols=24 Identities=13% Similarity=0.128 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcce
Q 014329 78 AYMLVGLFCLVIIVFYAHKSDAWV 101 (426)
Q Consensus 78 ~~~~~~l~~~l~~~~~~~~~s~~~ 101 (426)
.+.+...+.....-++.+|.+.+.
T Consensus 265 ~~~~~~~ig~~~~g~l~dr~~~~~ 288 (402)
T TIGR00897 265 TFFFTNIVFNVIFGIVGDKLGWMN 288 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhhcchh
Confidence 345566666666666777766443
No 223
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=43.19 E-value=3.2e+02 Score=26.50 Aligned_cols=26 Identities=15% Similarity=0.077 Sum_probs=13.0
Q ss_pred HHHHhhhhhhhhhhhhhhhcc-CCCHH
Q 014329 141 AVALSGLADALVQGGLIGAAG-ELPDR 166 (426)
Q Consensus 141 ~v~~~g~~~~~~q~s~~~la~-~fp~~ 166 (426)
...+.|++.+..+........ ..|++
T Consensus 294 ~~~~~g~~~g~~~~~~~~~~~~~~~~~ 320 (375)
T TIGR00899 294 LQLLNAIFIGILAGIGMLYFQDLMPGR 320 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcch
Confidence 344456555555555544444 34544
No 224
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=40.94 E-value=1e+02 Score=32.41 Aligned_cols=106 Identities=18% Similarity=0.160 Sum_probs=73.1
Q ss_pred HHHHHHHhhhhhhhhhhhhhh-cccchhHHHHHHHHHHHHhhhhccccCCCccccchhHHHHHHHHhhhcchhhhheeee
Q 014329 311 ILIAGYNVFDLVGKSLTAIYL-LENEKVAIGGCFARLLFFPLFLGCLHGPKFFRTEIPVTLLTCLLGLTNGYLTSVLMIL 389 (426)
Q Consensus 311 ~~~~~FnvgD~iGR~~~~~~~-~~~~~~l~~~s~~R~~fiPlf~~c~~~p~~~~~d~~~~il~~lfglTnGyl~t~~mi~ 389 (426)
++..++++|-.+|........ +..+|+.++.+. +.++--.+.+...+ +.+..++-=++.|+.-|....+.-+|
T Consensus 93 ~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~--~~~~iG~ii~~~a~----~~~~l~~GR~l~G~g~G~~~~~~piy 166 (513)
T KOG0254|consen 93 LLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAV--VLFLIGAIIIALAP----SWYQLIVGRILTGLGVGGASVLAPVY 166 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH--HHHHHHHHHHHHhh----hHHHHHHHHHHhccchhhhhhcchhh
Confidence 556788888888877765433 244555544433 22322222222222 44556666678888889888888889
Q ss_pred cCCCCChhhHHHHhHHHHHHHHHHHHHHHHHHH
Q 014329 390 APKVVQLQHAETAGIVIVLFLVLGLAAGSIVAW 422 (426)
Q Consensus 390 ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s~ 422 (426)
..+..+++.|..-......+.+.|+.+|-+.+.
T Consensus 167 ~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~ 199 (513)
T KOG0254|consen 167 ISEIAPAHIRGTLVSLYQLFITIGILLGYCINY 199 (513)
T ss_pred HhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 888888999999999999999999999866554
No 225
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=37.42 E-value=5.1e+02 Score=27.14 Aligned_cols=39 Identities=15% Similarity=0.008 Sum_probs=21.6
Q ss_pred HHHHHhhhhhhhhhhhhhhhcc-CCCHHHHH----HHHhccccc
Q 014329 140 GAVALSGLADALVQGGLIGAAG-ELPDRYMQ----ALVAGTAGS 178 (426)
Q Consensus 140 ~~v~~~g~~~~~~q~s~~~la~-~fp~~~~~----a~~~G~g~a 178 (426)
....+..+.++...-++=|.|= ++.++-.+ +-..||..+
T Consensus 138 ~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~G 181 (510)
T KOG3574|consen 138 LLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAG 181 (510)
T ss_pred HHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhh
Confidence 3445667777777766666654 34444332 334455555
No 226
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=35.97 E-value=2.3e+02 Score=29.88 Aligned_cols=181 Identities=9% Similarity=0.053 Sum_probs=78.8
Q ss_pred hhhHHHHHHhhhhhHHHHHHhch-hHhhcccc--CCCc--cchhhHHHHH-HHHHHHHHHHHHhhcC-CCcc-eEehhHH
Q 014329 36 LAYIIYFTLGLGFLLPWNAFITA-VDYFSYLY--PEAS--VDRIFAVAYM-LVGLFCLVIIVFYAHK-SDAW-VRINVGL 107 (426)
Q Consensus 36 ~~y~~f~llGi~~L~pwN~~ita-~dyf~~~~--~~~~--~~~~~~~~~~-~~~l~~~l~~~~~~~~-~s~~-~Ri~~~l 107 (426)
..-++-++--.+..+....+++- .-|+++-+ +-++ +-+.++...+ +..++...+.=++.+| ++.+ .|-+...
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~ 337 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNT 337 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHh
Confidence 34466677777888888888884 46776533 2211 2223332111 1122222222233222 3322 2222222
Q ss_pred HHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhccCCCHHHHHHHHhccccccccchhHHH
Q 014329 108 GLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAGELPDRYMQALVAGTAGSALLSAGVLV 187 (426)
Q Consensus 108 ~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~~fp~~~~~a~~~G~g~a~~~~~Gv~~ 187 (426)
+......+.+. ...+++.+. . +..+++..+.-...|+..++.+.=.-...|+|..-+|.-.... |-++
T Consensus 338 i~~~~~ai~l~--~l~~~~~~~--~---~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~-----~~~~ 405 (466)
T KOG2532|consen 338 IAFGGPAVFLL--VLAFTSDEH--R---LLAVILLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFV-----GALA 405 (466)
T ss_pred HHHHHHHHHHH--eeeecCCCc--c---hHHHHHHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHHH-----HHHH
Confidence 22222222111 223444222 1 2222232333334455555554444443788876666544444 3333
Q ss_pred HHHH-HHHHHhcccCccccchhHHHHHHHHHHHHHHHHHHHHHhh
Q 014329 188 SVLR-ILTKAVYTQDAIGLRKSANLYFAVGIVVMVICIVFYNVAH 231 (426)
Q Consensus 188 s~l~-ii~~~~~~~~~~~~~~sa~~yF~i~~~~~~~~~~~~~~l~ 231 (426)
.++. .++....+++ .+.+=...|.+.+++.+++.+.|.++-
T Consensus 406 ~~~~P~~vg~~~~~~---t~~eW~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 406 GFIAPLLVGIIVTDN---TREEWRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred HHHHHHheeeEeCCC---CHHHHHHHHHHHHHHHHHhchheeEee
Confidence 2222 2222333322 233344556677777777776666553
No 227
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=34.72 E-value=4.4e+02 Score=25.61 Aligned_cols=41 Identities=20% Similarity=0.054 Sum_probs=23.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcCCCcceEeh-hHHHHHHHHH
Q 014329 74 IFAVAYMLVGLFCLVIIVFYAHKSDAWVRIN-VGLGLFVVAL 114 (426)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~-~~l~~~~v~~ 114 (426)
.+...+.+..++..+..-++.+|.+.+.|.. .+.++.++..
T Consensus 236 ~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 277 (355)
T TIGR00896 236 SLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGL 277 (355)
T ss_pred HHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHH
Confidence 3444566677777777777777775444433 3334444333
No 228
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=34.18 E-value=5.4e+02 Score=26.51 Aligned_cols=42 Identities=14% Similarity=0.125 Sum_probs=22.0
Q ss_pred hhhhhhhhhhhhhhhccCCCHH---HHHHHHhccccccccchhHHHHHHH
Q 014329 145 SGLADALVQGGLIGAAGELPDR---YMQALVAGTAGSALLSAGVLVSVLR 191 (426)
Q Consensus 145 ~g~~~~~~q~s~~~la~~fp~~---~~~a~~~G~g~a~~~~~Gv~~s~l~ 191 (426)
..+++-..++-..-.+-.-|.+ ....+..-..++ +++++.+.
T Consensus 100 ~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G-----~lv~~~l~ 144 (433)
T PF03092_consen 100 YAFADVAADALVVELARREPESRGDLQSFVWGVRSVG-----SLVGSLLS 144 (433)
T ss_pred HHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHH-----HHHHHHhh
Confidence 3344555565555666566654 233334445556 66665554
No 229
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=33.54 E-value=1.7e+02 Score=29.46 Aligned_cols=59 Identities=10% Similarity=0.021 Sum_probs=41.9
Q ss_pred cchhHHHHHHHHhhhcchhhhheeeecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHHHH
Q 014329 364 TEIPVTLLTCLLGLTNGYLTSVLMILAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVAWF 423 (426)
Q Consensus 364 ~d~~~~il~~lfglTnGyl~t~~mi~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s~~ 423 (426)
+.+...+.-++.|+..|.. ........+..+++||..+-.+......+|..+|..++..
T Consensus 78 ~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~ 136 (368)
T TIGR00903 78 NYEWLLACQLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLK 136 (368)
T ss_pred cHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345666777888888753 3333333566778899999999988888888888776554
No 230
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=33.50 E-value=5e+02 Score=25.91 Aligned_cols=40 Identities=15% Similarity=0.084 Sum_probs=25.7
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHH
Q 014329 75 FAVAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVAL 114 (426)
Q Consensus 75 ~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~ 114 (426)
....+.+..++.....-++.+|.+.+..+..++.+..+..
T Consensus 245 ~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~ 284 (393)
T PRK09705 245 LLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGF 284 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHH
Confidence 4445667777888888888888776654555554444433
No 231
>PRK13743 conjugal transfer protein TrbF; Provisional
Probab=32.37 E-value=15 Score=31.33 Aligned_cols=58 Identities=14% Similarity=0.241 Sum_probs=47.4
Q ss_pred CCCCCCcccccccCCCcccCCCCCCCCchhhhHHHHHHhhhhhHHHHHHhch-hHhhcc
Q 014329 7 PEPGSESESSLLLGNSITVHQKPPPDTFHLAYIIYFTLGLGFLLPWNAFITA-VDYFSY 64 (426)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~p~d~~~~~y~~f~llGi~~L~pwN~~ita-~dyf~~ 64 (426)
.|+++|-|+++.-.++|-..++...|+|.-.++.|+--|+-.++.=+.+..+ .|-|+.
T Consensus 13 ke~~~~~e~KIrq~~rd~~y~~R~~~~Y~~LfiVFl~AG~vLw~vM~~iFd~CIDsWkA 71 (141)
T PRK13743 13 KEKKNDAELKIRQTKRDYDYERRVSDIYFDLFIVFLTAGIVLWVIMHSIFDACIDSWKA 71 (141)
T ss_pred hccCCChhHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhc
Confidence 4899999999999999988888888999999999999998666666666664 466764
No 232
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=31.36 E-value=1.4 Score=45.23 Aligned_cols=39 Identities=18% Similarity=0.324 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHH
Q 014329 79 YMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVV 117 (426)
Q Consensus 79 ~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i 117 (426)
.....++..+....+.+|+..|.-...+..+..++.+.+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~ 333 (451)
T PF00083_consen 295 LGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLIL 333 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccc
Confidence 334444444555566777776655666666665555443
No 233
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=31.26 E-value=1e+02 Score=33.58 Aligned_cols=71 Identities=10% Similarity=-0.027 Sum_probs=51.3
Q ss_pred hhhccCCCH--HHHHHHHhccccccccchhHHHHHHHHHHHHhcccC-ccccchhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 014329 157 IGAAGELPD--RYMQALVAGTAGSALLSAGVLVSVLRILTKAVYTQD-AIGLRKSANLYFAVGIVVMVICIVFYNVAHRL 233 (426)
Q Consensus 157 ~~la~~fp~--~~~~a~~~G~g~a~~~~~Gv~~s~l~ii~~~~~~~~-~~~~~~sa~~yF~i~~~~~~~~~~~~~~l~k~ 233 (426)
+.....|.. +-.+.++.+.|.. |-+....|++.++...+. ..++--.++.||++....+++. |...+|.
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~G~~-----~q~~f~~Rf~~Qw~~se~~~~s~~p~~FW~~s~~G~~~~l~---Y~i~r~d 194 (608)
T PRK01021 123 MASPNIFHLPLPPANLSWHLIGCI-----GLTIFSLRFFIQWFYLEYNNQSALPALFWKASLLGGSLALL---YFIRTGD 194 (608)
T ss_pred hhhHHHhhCCCcchhHHHHHHHHH-----HHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHhHHHHHH---HHHHhCC
Confidence 555555554 5566788889999 999999999999975432 3455567899999988766544 6666776
Q ss_pred hh
Q 014329 234 PV 235 (426)
Q Consensus 234 p~ 235 (426)
|.
T Consensus 195 pv 196 (608)
T PRK01021 195 PV 196 (608)
T ss_pred ce
Confidence 65
No 234
>PF04144 SCAMP: SCAMP family; InterPro: IPR007273 In vertebrates, secretory carrier membrane proteins (SCAMPs) 1-3 constitute a family of putative membrane-trafficking proteins composed of cytoplasmic N-terminal sequences with NPF repeats, four central transmembrane regions (TMRs), and a cytoplasmic tail. SCAMPs probably function in endocytosis by recruiting EH-domain proteins to the N-terminal NPF repeats but may have additional functions mediated by their other sequences [].; GO: 0015031 protein transport, 0016021 integral to membrane
Probab=31.06 E-value=4e+02 Score=24.04 Aligned_cols=62 Identities=21% Similarity=0.265 Sum_probs=36.7
Q ss_pred cCCCCCCCCchhhhHHHH-HHhhhhhHHHHHHhchhHhhccccCCCccchhhHHHHHHHHHHHHHH
Q 014329 25 VHQKPPPDTFHLAYIIYF-TLGLGFLLPWNAFITAVDYFSYLYPEASVDRIFAVAYMLVGLFCLVI 89 (426)
Q Consensus 25 ~~~~~p~d~~~~~y~~f~-llGi~~L~pwN~~ita~dyf~~~~~~~~~~~~~~~~~~~~~l~~~l~ 89 (426)
-+++.|+|.+..++..+. +++....+-||.+-...-.+.. ++.-+..+++.|.+...-.+..
T Consensus 22 i~~eIP~~~q~~v~~~y~~w~~~~~~l~~N~i~~~~~~~~~---~~~~~~~lai~y~~~~~P~sf~ 84 (177)
T PF04144_consen 22 ISEEIPEEFQRLVKRAYYLWLFLAITLFWNFIACLALLIAG---GSGSDFGLAILYLLLGTPASFF 84 (177)
T ss_pred HhHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCcceehHHHHHHHHHhHHHHH
Confidence 345556677776666555 7788888899998766544443 2223335555565444444333
No 235
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=29.21 E-value=2.4e+02 Score=32.58 Aligned_cols=24 Identities=17% Similarity=0.404 Sum_probs=10.9
Q ss_pred hhhhhhhhhhhhhhhccCCCHHHH
Q 014329 145 SGLADALVQGGLIGAAGELPDRYM 168 (426)
Q Consensus 145 ~g~~~~~~q~s~~~la~~fp~~~~ 168 (426)
.|+...++--++.+..+..|+...
T Consensus 963 lGIse~VmGlTfLA~GTSIPDlis 986 (1096)
T TIGR00927 963 IGISEEIMGLTILAAGTSIPDLIT 986 (1096)
T ss_pred cCCChhhhhhhhhhhhcccHHHHH
Confidence 344444444444444444444433
No 236
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=27.90 E-value=1.3e+02 Score=31.42 Aligned_cols=84 Identities=12% Similarity=-0.006 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhh
Q 014329 77 VAYMLVGLFCLVIIVFYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGL 156 (426)
Q Consensus 77 ~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~ 156 (426)
....+..++...+.-++.+|.+.+.=+..+.++..+.....+++.. ..+...+... .+..+...++.+++.++.....
T Consensus 295 ~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~-~~~~~~gi~~-~~~~~~~~~l~~~~~g~~~~~~ 372 (468)
T TIGR00788 295 VVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVK-RWNLAFGISD-EVFVLGDSIIAEVLAQLKFMPF 372 (468)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeee-ccccccCCCC-eeeeeehhHHHHHHHHHHHccH
Confidence 3455666666666667777777655455555554444433221110 0000000000 1123334455566666655555
Q ss_pred hhhccC
Q 014329 157 IGAAGE 162 (426)
Q Consensus 157 ~~la~~ 162 (426)
+.++..
T Consensus 373 ~~~~~~ 378 (468)
T TIGR00788 373 LVLLAR 378 (468)
T ss_pred HHHHHH
Confidence 665554
No 237
>PRK10478 putative PTS system fructose-like transporter subunit EIIC; Provisional
Probab=27.77 E-value=72 Score=32.42 Aligned_cols=46 Identities=20% Similarity=0.382 Sum_probs=35.0
Q ss_pred HHHHhhhhhhhhhhhh-hhhccCCCHHHHHHHHhccccccccchhHHHHHHHHHH
Q 014329 141 AVALSGLADALVQGGL-IGAAGELPDRYMQALVAGTAGSALLSAGVLVSVLRILT 194 (426)
Q Consensus 141 ~v~~~g~~~~~~q~s~-~~la~~fp~~~~~a~~~G~g~a~~~~~Gv~~s~l~ii~ 194 (426)
...+.|++ ++.|.++ |+..-.+ |-.-+.+.|.+++ |.+..+..+-.
T Consensus 251 sA~isgl~-GITEpAIPFgv~~p~--r~i~a~~iGsaVg-----Gal~~~~gv~~ 297 (359)
T PRK10478 251 AALVMGCV-GVTEGAIPFAAADPL--RVIPSIMVGSVCG-----AVTAALFGAQC 297 (359)
T ss_pred HHHHHHHH-hcCccchHHHHhcch--HHHHHHHHHHHHH-----HHHHHHhCCcc
Confidence 34455555 8999999 9998876 6778889999999 88877766543
No 238
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=27.23 E-value=1.8e+02 Score=30.16 Aligned_cols=27 Identities=7% Similarity=0.090 Sum_probs=14.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014329 74 IFAVAYMLVGLFCLVIIVFYAHKSDAW 100 (426)
Q Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~s~~ 100 (426)
...+..++..+++..+..++.++.++|
T Consensus 259 ~~~~vg~~~~l~g~~~y~~~~~~~~~R 285 (433)
T PF03092_consen 259 TLSIVGSIASLLGILLYRKYFSNWSWR 285 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 344445555555555555566666654
No 239
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=25.66 E-value=1.8e+02 Score=30.64 Aligned_cols=50 Identities=16% Similarity=0.226 Sum_probs=39.9
Q ss_pred HHhhhcchhhhheee--ecCCCCChhhHHHHhHHHHHHHHHHHHHHHHHHHH
Q 014329 374 LLGLTNGYLTSVLMI--LAPKVVQLQHAETAGIVIVLFLVLGLAAGSIVAWF 423 (426)
Q Consensus 374 lfglTnGyl~t~~mi--~ap~~v~~~ere~ag~~~~~~l~~Gl~~Gs~~s~~ 423 (426)
+.+++.||....+-. |.++..+.|+|-.+=.+++-+..+|+.+|..++-.
T Consensus 119 ~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~ 170 (463)
T KOG2816|consen 119 LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGY 170 (463)
T ss_pred hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 788888888776554 56777888899999888888888888888777654
No 240
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=25.46 E-value=22 Score=38.19 Aligned_cols=39 Identities=13% Similarity=0.255 Sum_probs=0.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhcCCCcceEehh-HHHHHHH
Q 014329 73 RIFAVAYMLVGLFCLVIIVFYAHKSDAWVRINV-GLGLFVV 112 (426)
Q Consensus 73 ~~~~~~~~~~~l~~~l~~~~~~~~~s~~~Ri~~-~l~~~~v 112 (426)
-.+..+|.+.+++..+....++.|. +|.|+++ |..++.+
T Consensus 41 G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~ 80 (539)
T PF03137_consen 41 GLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGL 80 (539)
T ss_dssp -----------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHH
Confidence 4677889999999998888888774 6788764 3333333
No 241
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=25.15 E-value=5.2e+02 Score=23.49 Aligned_cols=113 Identities=14% Similarity=0.127 Sum_probs=53.2
Q ss_pred cCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhccC-CCHHHHHHHHh
Q 014329 95 HKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAGE-LPDRYMQALVA 173 (426)
Q Consensus 95 ~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~~-fp~~~~~a~~~ 173 (426)
+|.+.+.|....+.+..+.+.+..++.... + + .. ...+...+.+++.|+..+..-.+.+. .+..++ +
T Consensus 74 ~~~~~~~~~~~~l~~~~~ll~~~~~~~~~~-~--~-~~----~~~~~~~~lafamg~Qn~~~~~~~g~~~~Tt~~----T 141 (209)
T PF06912_consen 74 RRRRRRRWYRILLLLEAILLLIAALLPPAF-P--P-HG----HRILAIFLLAFAMGMQNAAFRRLGGVSIRTTFM----T 141 (209)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhc-c--c-ch----HHHHHHHHHHHHHHHHHHHHHHcCCCcccchhh----H
Confidence 344455555566666666555544432211 1 1 11 22334444555555444433333332 223332 2
Q ss_pred ccccccccchhHHHHHHHHHHHHhcccCccccchhHHHHHHHHHHHHHHHHHHHHHhh
Q 014329 174 GTAGSALLSAGVLVSVLRILTKAVYTQDAIGLRKSANLYFAVGIVVMVICIVFYNVAH 231 (426)
Q Consensus 174 G~g~a~~~~~Gv~~s~l~ii~~~~~~~~~~~~~~sa~~yF~i~~~~~~~~~~~~~~l~ 231 (426)
|-+..+.+-+.+...++|+ .++....|+.+-..+..-++......+
T Consensus 142 ----------G~l~~~~~~l~~~~~~~~~--~~~~~~~~~~~i~~f~~Ga~~ga~l~~ 187 (209)
T PF06912_consen 142 ----------GNLTDLGIDLARYLRGKDR--ALRRALRYLLIILSFFIGAILGALLYR 187 (209)
T ss_pred ----------hhHHHHHHHHHHHHhCCch--hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555555555544433 345566666666666666665554333
No 242
>PRK11404 putative PTS system transporter subunits IIBC; Provisional
Probab=24.60 E-value=1.6e+02 Score=31.32 Aligned_cols=45 Identities=20% Similarity=0.195 Sum_probs=34.0
Q ss_pred HHhhhhhhhhhhhh-hhhccCCCHHHHHHHHhccccccccchhHHHHHHHHHHH
Q 014329 143 ALSGLADALVQGGL-IGAAGELPDRYMQALVAGTAGSALLSAGVLVSVLRILTK 195 (426)
Q Consensus 143 ~~~g~~~~~~q~s~-~~la~~fp~~~~~a~~~G~g~a~~~~~Gv~~s~l~ii~~ 195 (426)
.+.|++ ++.|.++ ||..-.+ ++..+.+.|.+++ |.+..+..+-..
T Consensus 379 ~i~gl~-GITEpAIPfgv~~p~--~~i~a~~iG~avg-----Ga~~~~~gv~~~ 424 (482)
T PRK11404 379 IVVGAT-VATEPAIPYALAAPL--PMITANTLAGGIT-----GVLVIAFGIKRL 424 (482)
T ss_pred HHHHHH-hcCcchhHHHHcCch--HHHHHHHHHHHHH-----HHHHHHhCCccc
Confidence 344444 7888988 8887766 6888889999999 998877775433
No 243
>COG2978 AbgT Putative p-aminobenzoyl-glutamate transporter [Coenzyme metabolism]
Probab=23.89 E-value=1.9e+02 Score=30.53 Aligned_cols=57 Identities=19% Similarity=0.227 Sum_probs=32.3
Q ss_pred ccccccccchhHHHHHHHHHHHHhc---ccCccccchhHHHHHHHHHHHHHHHHHHHHHhhc
Q 014329 174 GTAGSALLSAGVLVSVLRILTKAVY---TQDAIGLRKSANLYFAVGIVVMVICIVFYNVAHR 232 (426)
Q Consensus 174 G~g~a~~~~~Gv~~s~l~ii~~~~~---~~~~~~~~~sa~~yF~i~~~~~~~~~~~~~~l~k 232 (426)
+.|.|||++-|..=.++.=+|+.+. +++ ..+....-.||..+..+.+ ..++++.-.|
T Consensus 176 sgGfsanl~~~~~D~Ll~GfTq~AA~iidp~-~~vnp~~NwyF~~as~~vl-~~i~~fvTdK 235 (516)
T COG2978 176 SGGFSANLLPGTIDPLLAGFTQPAAQIIDPS-YQVNPLMNWYFIAASVFVL-TLIGWFVTDK 235 (516)
T ss_pred ccccccccccCcchHHHHHhhHHHHHhcCCc-cccCcchhHHHHHHHHHHH-HHHHHHHhcc
Confidence 4466666666666666666655432 222 2244556778888776554 4445555444
No 244
>COG4769 Predicted membrane protein [Function unknown]
Probab=23.64 E-value=3e+02 Score=24.83 Aligned_cols=48 Identities=13% Similarity=0.154 Sum_probs=33.7
Q ss_pred HHHHhhhhhhhhhhhhhhhccCCCHHHHHHHHhccc-cccccchhHHHHHHHHHHH
Q 014329 141 AVALSGLADALVQGGLIGAAGELPDRYMQALVAGTA-GSALLSAGVLVSVLRILTK 195 (426)
Q Consensus 141 ~v~~~g~~~~~~q~s~~~la~~fp~~~~~a~~~G~g-~a~~~~~Gv~~s~l~ii~~ 195 (426)
-+++.+++.|+..+-.+-+...|||||.+- .|.+ ++ |..-++.|.+..
T Consensus 78 ~~Fl~sfaG~i~S~L~m~~l~~f~~k~~S~--lgiS~mG-----aF~hNl~QLiva 126 (181)
T COG4769 78 PVFLYSFAGAILSTLFMYFLYQFGPKYLSL--LGISVMG-----AFTHNLGQLIVA 126 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCceEee--eehhhHH-----HHHHhHHHHHHH
Confidence 345678888888888899999999999532 2332 33 556678887743
No 245
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=22.90 E-value=6.7e+02 Score=23.95 Aligned_cols=127 Identities=17% Similarity=0.255 Sum_probs=63.8
Q ss_pred HhhcCCCcceEehhHHHHHHHHHHHHhhhhheeecccCCcchhhHHHHHHHHHhhhhhhhhhh-hhhhhccCCCHHHHHH
Q 014329 92 FYAHKSDAWVRINVGLGLFVVALLVVPVMDAVYIKGRVGLYDGFTVTVGAVALSGLADALVQG-GLIGAAGELPDRYMQA 170 (426)
Q Consensus 92 ~~~~~~s~~~Ri~~~l~~~~v~~i~i~~~~~~~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~-s~~~la~~fp~~~~~a 170 (426)
.+..+.+.+.-+..|.+...+....+-+. ..+ .. ....++...+...+.|.+++..+. ++..-...||.+ ++
T Consensus 58 ~l~d~~gp~~~l~iG~~~~~~GY~~~~l~---~~~-~i-~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~--RG 130 (250)
T PF06813_consen 58 LLYDRFGPWVVLLIGAVLGFVGYGLLWLA---VSG-RI-PSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRS--RG 130 (250)
T ss_pred HHHHhcchHHHHHHHHHHHHHHHHHHHHH---HhC-cc-CccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccc--cC
Confidence 34556665555556666555555443221 112 11 123455556666666666665544 455566679863 22
Q ss_pred HHhccccccccchhHHHHHHHHHHHHhcccCccccchhHHHHHHHHHHHHHHHHHHHHHhhcch
Q 014329 171 LVAGTAGSALLSAGVLVSVLRILTKAVYTQDAIGLRKSANLYFAVGIVVMVICIVFYNVAHRLP 234 (426)
Q Consensus 171 ~~~G~g~a~~~~~Gv~~s~l~ii~~~~~~~~~~~~~~sa~~yF~i~~~~~~~~~~~~~~l~k~p 234 (426)
...|--.+.+ |+-++++.-+..+.+++| .+.++ +.++....++|++.-..++..|
T Consensus 131 ~vvgilk~~~---GLSaai~t~i~~~~f~~~-----~~~fl-l~la~~~~~v~l~~~~~vr~~~ 185 (250)
T PF06813_consen 131 TVVGILKGFF---GLSAAIFTQIYSAFFGDD-----PSSFL-LFLAVLPAVVCLVAMFFVRPVP 185 (250)
T ss_pred ceehhhhHHH---HhHHHHHHHHHHHHcCCC-----hHHHH-HHHHHHHHHHHHHHhhheeccC
Confidence 2233222211 444566666667777653 22343 3455555556665555555544
No 246
>PF10587 EF-1_beta_acid: Eukaryotic elongation factor 1 beta central acidic region; InterPro: IPR018940 Translation elongation factors are responsible for two main processes during protein synthesis on the ribosome [, , ]. EF1A (or EF-Tu) is responsible for the selection and binding of the cognate aminoacyl-tRNA to the A-site (acceptor site) of the ribosome. EF2 (or EF-G) is responsible for the translocation of the peptidyl-tRNA from the A-site to the P-site (peptidyl-tRNA site) of the ribosome, thereby freeing the A-site for the next aminoacyl-tRNA to bind. Elongation factors are responsible for achieving accuracy of translation and both EF1A and EF2 are remarkably conserved throughout evolution. Elongation factor EF1B (also known as EF-Ts or EF-1beta/gamma/delta) is a nucleotide exchange factor that is required to regenerate EF1A from its inactive form (EF1A-GDP) to its active form (EF1A-GTP). EF1A is then ready to interact with a new aminoacyl-tRNA to begin the cycle again. EF1B is more complex in eukaryotes than in bacteria, and can consist of three subunits: EF1B-alpha (or EF-1beta), EF1B-gamma (or EF-1gamma) and EF1B-beta (or EF-1delta) []. This region is found in the centre of the beta subunits of Elongation factor-1. More information about these proteins can be found at Protein of the Month: Elongation Factors [].
Probab=22.81 E-value=35 Score=21.21 Aligned_cols=6 Identities=50% Similarity=0.878 Sum_probs=3.7
Q ss_pred CCCccc
Q 014329 10 GSESES 15 (426)
Q Consensus 10 ~~~~~~ 15 (426)
||||||
T Consensus 3 GSddEe 8 (28)
T PF10587_consen 3 GSDDEE 8 (28)
T ss_pred CCcccc
Confidence 677653
No 247
>PRK10297 PTS system N,N'-diacetylchitobiose-specific transporter subunit IIC; Provisional
Probab=21.72 E-value=1.1e+02 Score=32.05 Aligned_cols=26 Identities=15% Similarity=0.264 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHHhhcchhhHHHHhhhh
Q 014329 214 AVGIVVMVICIVFYNVAHRLPVIKYHEDLKI 244 (426)
Q Consensus 214 ~i~~~~~~~~~~~~~~l~k~p~~~~~~~~~~ 244 (426)
.+.++.++++.+.|+ |+.|-|.|...
T Consensus 410 ilq~v~lvi~~lIY~-----PFvK~~dk~~~ 435 (452)
T PRK10297 410 LVALFNLGIATLIYL-----PFVVVANKAQN 435 (452)
T ss_pred HHHHHHHHHHHHHHH-----HHHHHHHHHHH
Confidence 334444445555553 88887765443
No 248
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=21.66 E-value=9.5e+02 Score=25.23 Aligned_cols=112 Identities=12% Similarity=0.191 Sum_probs=56.8
Q ss_pred HHHHhchhH-hhccccCCCcc-chhhHHHHHHHHHHHHHHHHHhhcCCCcce--EehhHHHHHHHHHHHHhhhhhe----
Q 014329 52 WNAFITAVD-YFSYLYPEASV-DRIFAVAYMLVGLFCLVIIVFYAHKSDAWV--RINVGLGLFVVALLVVPVMDAV---- 123 (426)
Q Consensus 52 wN~~ita~d-yf~~~~~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~s~~~--Ri~~~l~~~~v~~i~i~~~~~~---- 123 (426)
.|++++... |-++.+.=+.. ...+.+.-++....+.++.-++.+|+..+. -+..++++.. ++++....
T Consensus 297 ~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~----~i~~~g~~G~~~ 372 (477)
T PF11700_consen 297 VNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWI----IIPLYGLFGFWP 372 (477)
T ss_pred HHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHH----HHHHHHHHHhhh
Confidence 455666443 33333321111 234456677788888888888899988773 2333333331 22222111
Q ss_pred -eecccCCcchhhHHHHHHHHHhhhhhhhhhhhhhhhcc-CCCHHHHHHHH
Q 014329 124 -YIKGRVGLYDGFTVTVGAVALSGLADALVQGGLIGAAG-ELPDRYMQALV 172 (426)
Q Consensus 124 -~~~~~~~~~~~f~~~l~~v~~~g~~~~~~q~s~~~la~-~fp~~~~~a~~ 172 (426)
... -.++..+|. ..++.|++.|-.|+..=++.+ +.|++...-+.
T Consensus 373 ~~~g-~~~~~~f~~----~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efF 418 (477)
T PF11700_consen 373 SFFG-LKSPWEFWV----LAVLIGLFMGGIQSASRSLFSRLIPPGREAEFF 418 (477)
T ss_pred cccC-cccHHHHHH----HHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHH
Confidence 000 011222332 444667777777777766666 46665544443
No 249
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=21.54 E-value=9.3e+02 Score=25.07 Aligned_cols=38 Identities=21% Similarity=0.038 Sum_probs=29.9
Q ss_pred hHHHHHHHHHhhhhhhhhhhhhhhhccCCCHHHHHHHH
Q 014329 135 FTVTVGAVALSGLADALVQGGLIGAAGELPDRYMQALV 172 (426)
Q Consensus 135 f~~~l~~v~~~g~~~~~~q~s~~~la~~fp~~~~~a~~ 172 (426)
++-.+++..++|++.+-.-+++--...-||||-.+.-+
T Consensus 105 ~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~Al 142 (417)
T COG2223 105 TWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLAL 142 (417)
T ss_pred hHHHHHHHHHHhcccceehcccccccccCChhhhhHHH
Confidence 36677888889999998888888888889998855443
Done!