BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014332
(426 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O64982|PRS7_PRUPE 26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2
SV=1
Length = 425
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/426 (98%), Positives = 424/426 (99%), Gaps = 1/426 (0%)
Query: 1 MAPEPEDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKE 60
MAPEPED IKDEKNPRPLDEDDIALLKTYGLGPYST IKKAEKE+KD+AKKVNDLCGIKE
Sbjct: 1 MAPEPED-IKDEKNPRPLDEDDIALLKTYGLGPYSTHIKKAEKEVKDLAKKVNDLCGIKE 59
Query: 61 SDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGD 120
SDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKII+PNSEDAKYVINVKQIAKFVVGLGD
Sbjct: 60 SDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGD 119
Query: 121 KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM 180
KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM
Sbjct: 120 KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM 179
Query: 181 REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ 240
REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ
Sbjct: 180 REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ 239
Query: 241 KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD 300
KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD
Sbjct: 240 KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD 299
Query: 301 GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERD 360
GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERD
Sbjct: 300 GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERD 359
Query: 361 IRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATP 420
IRFELLARLCPNSTGADIRSVCTEAGM+AIRARRKTVTEKDFLDAVNKVIKGYQKFSATP
Sbjct: 360 IRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATP 419
Query: 421 KYMVYN 426
KYMVYN
Sbjct: 420 KYMVYN 425
>sp|Q9FXT9|PRS7_ORYSJ 26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica
GN=RPT1A PE=2 SV=1
Length = 426
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/426 (97%), Positives = 422/426 (99%)
Query: 1 MAPEPEDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKE 60
MAPEPED+I +EKNPRPLDEDDIALLKTYGLGPYSTSIKK EKEIK+MAKK+NDLCGIKE
Sbjct: 1 MAPEPEDDIMNEKNPRPLDEDDIALLKTYGLGPYSTSIKKVEKEIKEMAKKINDLCGIKE 60
Query: 61 SDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGD 120
SDTGLA PSQWDLVSDKQMMQEEQPLQVARCTKIISPN++DAKYVINVKQIAKFVVGLGD
Sbjct: 61 SDTGLAPPSQWDLVSDKQMMQEEQPLQVARCTKIISPNTDDAKYVINVKQIAKFVVGLGD 120
Query: 121 KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM 180
KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM
Sbjct: 121 KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM 180
Query: 181 REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ 240
REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ
Sbjct: 181 REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ 240
Query: 241 KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD 300
KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD
Sbjct: 241 KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD 300
Query: 301 GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERD 360
GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE RTQIFKIHTRTMNCERD
Sbjct: 301 GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERD 360
Query: 361 IRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATP 420
IRFELLARLCPNSTGADIRSVCTEAGM+AIRARRKTVTEKDFLDAVNKVIKGYQKFSATP
Sbjct: 361 IRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATP 420
Query: 421 KYMVYN 426
KYMVYN
Sbjct: 421 KYMVYN 426
>sp|Q41365|PRS7_SPIOL 26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2
SV=1
Length = 426
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/426 (97%), Positives = 420/426 (98%)
Query: 1 MAPEPEDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKE 60
MA E ED++KDEKNPRPLDEDDIALLKTYGLGPYS SIKK EKEIKDM+KKVNDL GIKE
Sbjct: 1 MAIEHEDDLKDEKNPRPLDEDDIALLKTYGLGPYSASIKKVEKEIKDMSKKVNDLIGIKE 60
Query: 61 SDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGD 120
SDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKII+PN+EDAKYVINVKQIAKFVVGLGD
Sbjct: 61 SDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNTEDAKYVINVKQIAKFVVGLGD 120
Query: 121 KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM 180
KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM
Sbjct: 121 KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM 180
Query: 181 REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ 240
REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ
Sbjct: 181 REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ 240
Query: 241 KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD 300
KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD
Sbjct: 241 KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD 300
Query: 301 GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERD 360
GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE RTQIFKIHTRTMNCERD
Sbjct: 301 GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERD 360
Query: 361 IRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATP 420
IRFELLARLCPNSTGADIRSVCTEAGM+AIRARRKTVTEKDFLDAVNKVIKGYQKFSATP
Sbjct: 361 IRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATP 420
Query: 421 KYMVYN 426
KYMVYN
Sbjct: 421 KYMVYN 426
>sp|Q9SSB5|PRS7A_ARATH 26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana
GN=RPT1A PE=2 SV=1
Length = 426
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/426 (96%), Positives = 419/426 (98%)
Query: 1 MAPEPEDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKE 60
M + EDEI+DEKNPRPLDEDDIALLKTYGLGPYS IKK EKEIKD+AKK+NDLCGIKE
Sbjct: 1 MVRDIEDEIRDEKNPRPLDEDDIALLKTYGLGPYSAPIKKVEKEIKDLAKKINDLCGIKE 60
Query: 61 SDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGD 120
SDTGLA PSQWDLVSDKQMMQEEQPLQVARCTKIISPN+EDAKYVINVKQIAKFVVGLGD
Sbjct: 61 SDTGLAPPSQWDLVSDKQMMQEEQPLQVARCTKIISPNTEDAKYVINVKQIAKFVVGLGD 120
Query: 121 KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM 180
KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM
Sbjct: 121 KVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKM 180
Query: 181 REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ 240
REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ
Sbjct: 181 REVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQ 240
Query: 241 KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD 300
KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD
Sbjct: 241 KYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLD 300
Query: 301 GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERD 360
GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERD
Sbjct: 301 GFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERD 360
Query: 361 IRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATP 420
IRFELLARLCPNSTGADIRSVCTEAGM+AIRARRKTVTEKDFLDAVNKVIKGYQKFSATP
Sbjct: 361 IRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATP 420
Query: 421 KYMVYN 426
KYMVYN
Sbjct: 421 KYMVYN 426
>sp|Q86JA1|PRS7_DICDI 26S protease regulatory subunit 7 OS=Dictyostelium discoideum
GN=psmC2 PE=1 SV=1
Length = 428
Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/421 (81%), Positives = 374/421 (88%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
EDE+ +E P LDE DIALLK+YG+GPYS SI+ E++IK M KVN+LCGIKESDTG+
Sbjct: 8 EDELLNETAPVALDEGDIALLKSYGVGPYSKSIRILEEDIKKMTSKVNELCGIKESDTGI 67
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPT 125
PSQWDLV DK EE PLQVARCTKII +AKY+I VKQIAKFVV LGDK+SPT
Sbjct: 68 GPPSQWDLVVDKTSAHEEPPLQVARCTKIIDVGKPNAKYIITVKQIAKFVVALGDKLSPT 127
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
D+EEG+RVGVDRNKYQIQIPLPPKID SVTMM VEEKPD+TY DVGGCKEQIEK+REVVE
Sbjct: 128 DVEEGIRVGVDRNKYQIQIPLPPKIDASVTMMQVEEKPDITYKDVGGCKEQIEKLREVVE 187
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
+P+LHPEKFV LGIDPPKGVL YGPPGTGKTL ARAVANRTDA F+RVIGSELVQKYVGE
Sbjct: 188 MPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAVANRTDAAFVRVIGSELVQKYVGE 247
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVR+LFQMARSKKACI+FFDEVDAIGGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 248 GARMVRDLFQMARSKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPR 307
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE R IF IH +TM+C RDIRFEL
Sbjct: 308 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHIFTIHAKTMSCARDIRFEL 367
Query: 366 LARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVY 425
LARLCPNSTGADIRSVCTEAGMFAIRARRK V+EKDFL+A++KVIK Y KFSAT +YM Y
Sbjct: 368 LARLCPNSTGADIRSVCTEAGMFAIRARRKVVSEKDFLEAIDKVIKSYAKFSATSRYMHY 427
Query: 426 N 426
N
Sbjct: 428 N 428
>sp|P46471|PRS7_MOUSE 26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1
SV=5
Length = 433
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/421 (80%), Positives = 378/421 (89%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
++E KD+K R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGL
Sbjct: 13 KEEEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGL 72
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPT 125
A P+ WDL +DKQ +Q EQPLQVARCTKII+ +SED KY+INVKQ AKFVV L D+V+PT
Sbjct: 73 APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT 132
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE
Sbjct: 133 DIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVE 192
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
P+LHPE+FV LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGE
Sbjct: 193 TPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 252
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 253 GARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPR 312
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFEL
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFEL 372
Query: 366 LARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVY 425
LARLCPNSTGA+IRSVCTEAGMFAIRARRK TEKDFL+AVNKVIK Y KFSATP+YM Y
Sbjct: 373 LARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRYMTY 432
Query: 426 N 426
N
Sbjct: 433 N 433
>sp|Q4R4R0|PRS7_MACFA 26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2
PE=2 SV=3
Length = 433
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/421 (81%), Positives = 378/421 (89%), Gaps = 1/421 (0%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
EDE KD+K R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGL
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGL 72
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPT 125
A P+ WDL +DKQ +Q EQPLQVARCTKII+ +SED KY+INVKQ AKFVV L D+V+PT
Sbjct: 73 APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT 132
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE
Sbjct: 133 DIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVE 192
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
P+LHPE+FV LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGE
Sbjct: 193 TPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 252
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 253 GARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPR 312
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFEL
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFEL 372
Query: 366 LARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVY 425
LARLCPNSTGA+IRSVCTEAGMFAIRARRK TEKDFL+AVNKVIK Y KFSATP+YM Y
Sbjct: 373 LARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRYMTY 432
Query: 426 N 426
N
Sbjct: 433 N 433
>sp|P35998|PRS7_HUMAN 26S protease regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1
SV=3
Length = 433
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/421 (81%), Positives = 378/421 (89%), Gaps = 1/421 (0%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
EDE KD+K R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGL
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGL 72
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPT 125
A P+ WDL +DKQ +Q EQPLQVARCTKII+ +SED KY+INVKQ AKFVV L D+V+PT
Sbjct: 73 APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT 132
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE
Sbjct: 133 DIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVE 192
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
P+LHPE+FV LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGE
Sbjct: 193 TPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 252
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 253 GARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPR 312
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFEL
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFEL 372
Query: 366 LARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVY 425
LARLCPNSTGA+IRSVCTEAGMFAIRARRK TEKDFL+AVNKVIK Y KFSATP+YM Y
Sbjct: 373 LARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRYMTY 432
Query: 426 N 426
N
Sbjct: 433 N 433
>sp|Q5E9F9|PRS7_BOVIN 26S protease regulatory subunit 7 OS=Bos taurus GN=PSMC2 PE=2 SV=3
Length = 433
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/421 (81%), Positives = 378/421 (89%), Gaps = 1/421 (0%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
EDE KD+K R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGL
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGL 72
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPT 125
A P+ WDL +DKQ +Q EQPLQVARCTKII+ +SED KY+INVKQ AKFVV L D+V+PT
Sbjct: 73 APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT 132
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE
Sbjct: 133 DIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVE 192
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
P+LHPE+FV LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGE
Sbjct: 193 TPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 252
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 253 GARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPR 312
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFEL
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFEL 372
Query: 366 LARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVY 425
LARLCPNSTGA+IRSVCTEAGMFAIRARRK TEKDFL+AVNKVIK Y KFSATP+YM Y
Sbjct: 373 LARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRYMTY 432
Query: 426 N 426
N
Sbjct: 433 N 433
>sp|Q5R8D7|PRS7_PONAB 26S protease regulatory subunit 7 OS=Pongo abelii GN=PSMC2 PE=2
SV=3
Length = 433
Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/421 (80%), Positives = 377/421 (89%), Gaps = 1/421 (0%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
EDE KD+K R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGL
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGL 72
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPT 125
A P+ WDL +DKQ +Q EQPLQVARCTKII+ +SED KY+INVKQ AKFVV L D+V+PT
Sbjct: 73 APPALWDLAADKQTLQSEQPLQVARCTKIITADSEDPKYIINVKQFAKFVVDLSDQVAPT 132
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE
Sbjct: 133 DIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVE 192
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
P+LHPE+FV LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGE
Sbjct: 193 TPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 252
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 253 GARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPR 312
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT I KIH R+M+ ERDIRFEL
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHILKIHARSMSVERDIRFEL 372
Query: 366 LARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVY 425
LARLCPNSTGA+IRSVCTEAGMFAIRARRK TEKDFL+AVNKVIK Y KFSATP+YM Y
Sbjct: 373 LARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRYMTY 432
Query: 426 N 426
N
Sbjct: 433 N 433
>sp|Q63347|PRS7_RAT 26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2
PE=1 SV=3
Length = 433
Score = 711 bits (1836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/421 (80%), Positives = 377/421 (89%), Gaps = 1/421 (0%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
EDE KD+K R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGL
Sbjct: 14 EDE-KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGL 72
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPT 125
A P+ WDL +DKQ +Q EQPLQVARCTKII+ +SED KY+INVKQ AKFVV L D+V+PT
Sbjct: 73 APPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPT 132
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVGVDRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE
Sbjct: 133 DIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVE 192
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
P+LHPE+FV LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFI VIGSELVQKYVGE
Sbjct: 193 TPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGE 252
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 253 GARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPR 312
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFEL
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFEL 372
Query: 366 LARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVY 425
LARLCPNSTGA+IRSVCTEAGMFAIRARRK TEKDFL+AVNKVIK Y KFSATP+YM Y
Sbjct: 373 LARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRYMTY 432
Query: 426 N 426
N
Sbjct: 433 N 433
>sp|P46472|PRS7_XENLA 26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2
SV=1
Length = 433
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/411 (81%), Positives = 371/411 (90%)
Query: 16 RPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVS 75
R LDE DIALLKTYG YS IK+ E +I+ + KK+N+L GIKESDTGLA P+ WDL +
Sbjct: 23 RSLDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAA 82
Query: 76 DKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGV 135
DKQ +Q EQPLQVARCTKII+ +SED KY+INVKQ AKFVV L D+V+PTDIEEGMRVGV
Sbjct: 83 DKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGV 142
Query: 136 DRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFV 195
DRNKYQI IPLPPKIDP+VTMM VEEKPDVTY+DVGGCKEQIEK+REVVE P+LHPE+FV
Sbjct: 143 DRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFV 202
Query: 196 KLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQ 255
LGI+PPKGVL +GPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF+
Sbjct: 203 NLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFE 262
Query: 256 MARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATN 315
MAR+KKAC++FFDE+DAIGGARFDDG GGDNEVQRTMLE++NQLDGFD RGNIKVLMATN
Sbjct: 263 MARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATN 322
Query: 316 RPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTG 375
RPDTLDPAL+RPGRLDRK+EF LPDLE RT IFKIH R+M+ ERDIRFELLARLCPNSTG
Sbjct: 323 RPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTG 382
Query: 376 ADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 426
A+IRSVCTEAGMFAIRARRK TEKDFL+AVNKVIK Y KFSATP+YM YN
Sbjct: 383 AEIRSVCTEAGMFAIRARRKVATEKDFLEAVNKVIKSYAKFSATPRYMTYN 433
>sp|Q9SSB4|PRS7B_ARATH 26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana
GN=RPT1B PE=2 SV=2
Length = 464
Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/393 (86%), Positives = 369/393 (93%), Gaps = 1/393 (0%)
Query: 33 PYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCT 92
PYS IKK EKEI ++A+K+ +L GIKESDTGLA P+QWDLVSDKQMMQEEQPL VA CT
Sbjct: 71 PYSARIKKVEKEINELAEKICNL-GIKESDTGLAPPNQWDLVSDKQMMQEEQPLLVATCT 129
Query: 93 KIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDP 152
+IISPN+EDAKYV+++K+I K+VVGLGDK SPTDIE GMRVGVD+ KYQIQIPLPPKIDP
Sbjct: 130 QIISPNTEDAKYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDP 189
Query: 153 SVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPG 212
SVTMMTVEEKPD TY+D+GGCKEQIEK+REVVELPMLHPEKFV+LGIDPPKGVLCYGPPG
Sbjct: 190 SVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPG 249
Query: 213 TGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDA 272
+GKTL+ARAVANRT ACFIRV+GSELVQKY+GEGARMVRELFQMARSKKACI+FFDE+DA
Sbjct: 250 SGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDA 309
Query: 273 IGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDR 332
IGGARFDDGVG DNEVQRTMLEI+ QLDGFDARGNIKVLMATNRPD LDPALLRPGRLDR
Sbjct: 310 IGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDR 369
Query: 333 KVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA 392
KVEF LPDLE RTQIFKIHTRTM+CERDIRFELLA LCPNSTGADIRSVC EAGM+AI A
Sbjct: 370 KVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGA 429
Query: 393 RRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVY 425
RRK+VTEKDFLDAVNKV+KGYQKFSATPKYM Y
Sbjct: 430 RRKSVTEKDFLDAVNKVVKGYQKFSATPKYMAY 462
>sp|Q18787|PRS7_CAEEL 26S protease regulatory subunit 7 OS=Caenorhabditis elegans
GN=rpt-1 PE=1 SV=1
Length = 435
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/421 (76%), Positives = 372/421 (88%)
Query: 6 EDEIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGL 65
+D ++EKN + LDE DIA+LK YG GPY+ +K + +I++ KKVN+L G+KESDTGL
Sbjct: 15 DDTKEEEKNFQALDEGDIAVLKRYGQGPYAEQLKTLDADIENCLKKVNELSGVKESDTGL 74
Query: 66 AAPSQWDLVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPT 125
A P+ WD+ +DKQ MQ+EQPLQVARCTKII+ + D +Y+INVKQ AKFVV L D V+PT
Sbjct: 75 APPALWDIAADKQAMQQEQPLQVARCTKIITSDKHDPRYLINVKQFAKFVVDLADSVAPT 134
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVGVDRNKYQI +PLP KIDP+VTMM VEEKPDVTY+DVGGCK+QIEK+REVVE
Sbjct: 135 DIEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVE 194
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
P+LHPE++V LGI+PPKGVL YGPPGTGKTL ARAVANRTDACFIRVIGSELVQKYVGE
Sbjct: 195 TPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGE 254
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKAC++FFDE+DA+GGARFDDG GGDNEVQRTMLE++NQLDGFD R
Sbjct: 255 GARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPR 314
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVLMATNRPDTLDPAL+RPGRLDRKVEF LPDL R I KIH + M+ ERDIR++L
Sbjct: 315 GNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDL 374
Query: 366 LARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVY 425
LARLCPNSTGA+IRSVCTEAGMFAIRARRK TEKDFL+A+NKV+KGY KFSATP+Y+ +
Sbjct: 375 LARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINKVVKGYAKFSATPRYLTH 434
Query: 426 N 426
N
Sbjct: 435 N 435
>sp|O42931|PRS7_SCHPO 26S protease regulatory subunit 7 homolog OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=rpt1 PE=1 SV=2
Length = 438
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/418 (74%), Positives = 361/418 (86%), Gaps = 2/418 (0%)
Query: 8 EIKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAA 67
E +++KNP PLDE DI LLK+Y GPY+ + +++ + + K++ND GIKESDTGLA
Sbjct: 17 EEENDKNPPPLDEGDIELLKSYATGPYARELAAIKEDTEAVLKRINDTVGIKESDTGLAP 76
Query: 68 PSQWDLVSDKQMMQEEQPLQVARCTKIIS--PNSEDAKYVINVKQIAKFVVGLGDKVSPT 125
S WD+ +D+Q M EEQPLQVARCTKII ++E YVIN+KQIAKFVV LG++VSPT
Sbjct: 77 ISFWDVAADRQRMSEEQPLQVARCTKIIENEQSAEKNAYVINLKQIAKFVVSLGERVSPT 136
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
DIEEGMRVG DRNKY IQ+PLPPKIDPSVTMM VEEKPDVTY DVGGCKEQIE++REVVE
Sbjct: 137 DIEEGMRVGCDRNKYAIQLPLPPKIDPSVTMMQVEEKPDVTYGDVGGCKEQIERLREVVE 196
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
LP+L PE+FVKLGIDPPKG++ YGPPGTGKTL ARAVANRTDA FIRVIGSELVQKYVGE
Sbjct: 197 LPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGE 256
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDAR 305
GARMVRELF+MAR+KKACI+FFDE+DAIGGARFDDG GGDNEVQRTMLE++ QLDGFD R
Sbjct: 257 GARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPR 316
Query: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFEL 365
GNIKVL ATNRP+TLD AL+RPGR+DRKVEFGLPDLE R I +IH ++M ++DIR+EL
Sbjct: 317 GNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWEL 376
Query: 366 LARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYM 423
+ARLCP+ TGA++RSVCTEAGMFAIRARR+ TEKDFLDAV KV+KG QKFS+T YM
Sbjct: 377 IARLCPSQTGAELRSVCTEAGMFAIRARRRVATEKDFLDAVQKVVKGNQKFSSTADYM 434
>sp|P33299|PRS7_YEAST 26S protease regulatory subunit 7 homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RPT1 PE=1
SV=1
Length = 467
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/440 (70%), Positives = 361/440 (82%), Gaps = 30/440 (6%)
Query: 17 PLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSD 76
PL E DI +LK+YG PY+ +K+ E ++KD+ ++ + G+KESDTGLA WD++ D
Sbjct: 28 PLTEGDIQVLKSYGAAPYAAKLKQTENDLKDIEARIKEKAGVKESDTGLAPSHLWDIMGD 87
Query: 77 KQMMQEEQPLQVARCTKIISPNSED------------------------------AKYVI 106
+Q + EE PLQVARCTKII N E AKYVI
Sbjct: 88 RQRLGEEHPLQVARCTKIIKGNGESDETTTDNNNSGNSNSNSNQQSTDADEDDEDAKYVI 147
Query: 107 NVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVT 166
N+KQIAKFVVGLG++VSPTDIEEGMRVGVDR+KY I++PLPP+IDPSVTMMTVEEKPDVT
Sbjct: 148 NLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVT 207
Query: 167 YNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRT 226
Y+DVGGCK+QIEK+REVVELP+L PE+F LGIDPPKG+L YGPPGTGKTL ARAVANRT
Sbjct: 208 YSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRT 267
Query: 227 DACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDN 286
DA FIRVIGSELVQKYVGEGARMVRELF+MAR+KKACI+FFDE+DA+GGARFDDG GGDN
Sbjct: 268 DATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDN 327
Query: 287 EVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQ 346
EVQRTMLE++ QLDGFD RGNIKV+ ATNRP+TLDPALLRPGR+DRKVEF LPDLE R
Sbjct: 328 EVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRAN 387
Query: 347 IFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAV 406
IF+IH+++M+ ER IR+EL++RLCPNSTGA++RSVCTEAGMFAIRARRK TEKDFL AV
Sbjct: 388 IFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLKAV 447
Query: 407 NKVIKGYQKFSATPKYMVYN 426
+KVI GY+KFS+T +YM YN
Sbjct: 448 DKVISGYKKFSSTSRYMQYN 467
>sp|P54814|PRS8_MANSE 26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1
Length = 402
Score = 363 bits (932), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 194/385 (50%), Positives = 257/385 (66%), Gaps = 8/385 (2%)
Query: 27 KTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPL 86
K G PY I K E+ +A+K +L ++ L A + L + Q++QE
Sbjct: 12 KGEGFRPYY--ITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRM-LREELQLLQE---- 64
Query: 87 QVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPL 146
Q + +++ P + K ++ V KFVV L V D+ RV + Y + L
Sbjct: 65 QGSYVGEVVKP-MDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKIL 123
Query: 147 PPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVL 206
P K+DP V++M VE+ PD TY VGG +QI++++EV+ELP+ HPE F LGI PKGVL
Sbjct: 124 PNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVL 183
Query: 207 CYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVF 266
YGPPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR I+F
Sbjct: 184 LYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIF 243
Query: 267 FDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLR 326
DE+D+IG +R + G GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LDPALLR
Sbjct: 244 MDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLR 303
Query: 327 PGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAG 386
PGR+DRK+EF P+ E+R I KIH+R MN R I +A L P ++GA+++ VCTEAG
Sbjct: 304 PGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAG 363
Query: 387 MFAIRARRKTVTEKDFLDAVNKVIK 411
M+A+R RR VT++DF AV KV++
Sbjct: 364 MYALRERRVHVTQEDFEMAVAKVMQ 388
>sp|O18413|PRS8_DROME 26S protease regulatory subunit 8 OS=Drosophila melanogaster
GN=Pros45 PE=1 SV=2
Length = 405
Score = 363 bits (931), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 192/382 (50%), Positives = 257/382 (67%), Gaps = 6/382 (1%)
Query: 30 GLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVA 89
G G S I+K E+ +A+K +L ++ L A + L + Q++QE Q +
Sbjct: 16 GEGFRSYYIQKIEELQLVVAEKHQNLRRLQAQRNELNAKVRM-LREELQLLQE----QGS 70
Query: 90 RCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPK 149
+++ P + K ++ V KFVV L + D+ RV + Y + LP K
Sbjct: 71 YVGEVVKP-MDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNK 129
Query: 150 IDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYG 209
+DP V++M VE+ PD TY VGG +QI++++EV+ELP+ HPE F LGI PKGVL YG
Sbjct: 130 VDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYG 189
Query: 210 PPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDE 269
PPGTGKTLLARAVA+ T+ FIRV GSELVQK++GEG+RMVRELF MAR I+F DE
Sbjct: 190 PPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDE 249
Query: 270 VDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR 329
+D+IG +R + G GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LDPALLRPGR
Sbjct: 250 IDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGR 309
Query: 330 LDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFA 389
+DRK+EF P+ E+R I KIH+R MN R I +A L P ++GA+++ VCTEAGM+A
Sbjct: 310 IDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYA 369
Query: 390 IRARRKTVTEKDFLDAVNKVIK 411
+R RR VT++DF AV KV++
Sbjct: 370 LRERRVHVTQEDFEMAVAKVMQ 391
>sp|P62198|PRS8_RAT 26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5
PE=1 SV=1
Length = 406
Score = 357 bits (916), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 174/309 (56%), Positives = 224/309 (72%)
Query: 103 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEK 162
K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+
Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 163 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAV 222
PD TY +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAV
Sbjct: 144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 203
Query: 223 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 282
A+ TD FIRV GSELVQK++GEGARMVRELF MAR I+F DE+D+IG +R + G
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263
Query: 283 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 342
GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LD ALLRPGR+DRK+EF P+ E
Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323
Query: 343 SRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDF 402
+R I KIH+R MN R I +A L P ++GA+++ VCTEAGM+A+R RR VT++DF
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
Query: 403 LDAVNKVIK 411
AV KV++
Sbjct: 384 EMAVAKVMQ 392
>sp|P62197|PRS8_PIG 26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1
Length = 406
Score = 357 bits (916), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 174/309 (56%), Positives = 224/309 (72%)
Query: 103 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEK 162
K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+
Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 163 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAV 222
PD TY +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAV
Sbjct: 144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 203
Query: 223 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 282
A+ TD FIRV GSELVQK++GEGARMVRELF MAR I+F DE+D+IG +R + G
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263
Query: 283 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 342
GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LD ALLRPGR+DRK+EF P+ E
Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323
Query: 343 SRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDF 402
+R I KIH+R MN R I +A L P ++GA+++ VCTEAGM+A+R RR VT++DF
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
Query: 403 LDAVNKVIK 411
AV KV++
Sbjct: 384 EMAVAKVMQ 392
>sp|P62196|PRS8_MOUSE 26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1
SV=1
Length = 406
Score = 357 bits (916), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 174/309 (56%), Positives = 224/309 (72%)
Query: 103 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEK 162
K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+
Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 163 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAV 222
PD TY +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAV
Sbjct: 144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 203
Query: 223 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 282
A+ TD FIRV GSELVQK++GEGARMVRELF MAR I+F DE+D+IG +R + G
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263
Query: 283 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 342
GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LD ALLRPGR+DRK+EF P+ E
Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323
Query: 343 SRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDF 402
+R I KIH+R MN R I +A L P ++GA+++ VCTEAGM+A+R RR VT++DF
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
Query: 403 LDAVNKVIK 411
AV KV++
Sbjct: 384 EMAVAKVMQ 392
>sp|P62195|PRS8_HUMAN 26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1
SV=1
Length = 406
Score = 357 bits (916), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 174/309 (56%), Positives = 224/309 (72%)
Query: 103 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEK 162
K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+
Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 163 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAV 222
PD TY +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAV
Sbjct: 144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 203
Query: 223 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 282
A+ TD FIRV GSELVQK++GEGARMVRELF MAR I+F DE+D+IG +R + G
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263
Query: 283 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 342
GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LD ALLRPGR+DRK+EF P+ E
Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323
Query: 343 SRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDF 402
+R I KIH+R MN R I +A L P ++GA+++ VCTEAGM+A+R RR VT++DF
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
Query: 403 LDAVNKVIK 411
AV KV++
Sbjct: 384 EMAVAKVMQ 392
>sp|P62194|PRS8_BOVIN 26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1
Length = 406
Score = 357 bits (916), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 174/309 (56%), Positives = 224/309 (72%)
Query: 103 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEK 162
K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+
Sbjct: 84 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 163 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAV 222
PD TY +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAV
Sbjct: 144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 203
Query: 223 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 282
A+ TD FIRV GSELVQK++GEGARMVRELF MAR I+F DE+D+IG +R + G
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263
Query: 283 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 342
GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LD ALLRPGR+DRK+EF P+ E
Sbjct: 264 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 323
Query: 343 SRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDF 402
+R I KIH+R MN R I +A L P ++GA+++ VCTEAGM+A+R RR VT++DF
Sbjct: 324 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383
Query: 403 LDAVNKVIK 411
AV KV++
Sbjct: 384 EMAVAKVMQ 392
>sp|Q9C5U3|PRS8A_ARATH 26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana
GN=RPT6A PE=2 SV=1
Length = 419
Score = 357 bits (916), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 187/347 (53%), Positives = 241/347 (69%), Gaps = 11/347 (3%)
Query: 72 DLVSDKQMMQEE-QPLQ-----VARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPT 125
+L S +M++EE Q LQ V K++ N K ++ V K+VV + + T
Sbjct: 63 ELNSRVRMLREELQLLQEPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVDIDKSIDIT 118
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
I RV + + Y + + LP K+DP V +M VE+ PD TY+ +GG +QI++++EV+E
Sbjct: 119 KITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIE 178
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
LP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GE
Sbjct: 179 LPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE 238
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG-GDNEVQRTMLEIVNQLDGFDA 304
G+RMVRELF MAR I+F DE+D+IG AR + G G GD+EVQRTMLE++NQLDGF+A
Sbjct: 239 GSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEA 298
Query: 305 RGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
IKVLMATNR D LD ALLRPGR+DRK+EF P+ ESR I KIH+R MN R I +
Sbjct: 299 SNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLK 358
Query: 365 LLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIK 411
+A ++GA++++VCTEAGMFA+R RR VT++DF AV KV+K
Sbjct: 359 KIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMK 405
>sp|Q94BQ2|PRS8B_ARATH 26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana
GN=RPT6B PE=2 SV=1
Length = 419
Score = 356 bits (913), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 186/347 (53%), Positives = 241/347 (69%), Gaps = 11/347 (3%)
Query: 72 DLVSDKQMMQEE-QPLQ-----VARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPT 125
+L S +M++EE Q LQ V K++ N K ++ V K+VV + + T
Sbjct: 63 ELNSRVRMLREELQLLQEPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVDIDKSIDIT 118
Query: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
+ RV + + Y + + LP K+DP V +M VE+ PD TY+ +GG +QI++++EV+E
Sbjct: 119 KLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIE 178
Query: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
LP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GE
Sbjct: 179 LPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE 238
Query: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG-GDNEVQRTMLEIVNQLDGFDA 304
G+RMVRELF MAR I+F DE+D+IG AR + G G GD+EVQRTMLE++NQLDGF+A
Sbjct: 239 GSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEA 298
Query: 305 RGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
IKVLMATNR D LD ALLRPGR+DRK+EF P+ ESR I KIH+R MN R I +
Sbjct: 299 SNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLK 358
Query: 365 LLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIK 411
+A ++GA++++VCTEAGMFA+R RR VT++DF AV KV+K
Sbjct: 359 KIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMK 405
>sp|O28303|PAN_ARCFU Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=pan PE=1 SV=1
Length = 398
Score = 353 bits (907), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 172/318 (54%), Positives = 224/318 (70%)
Query: 94 IISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPS 153
++S ED + V+ KFVV ++ +++ G RV +++ I LP DP
Sbjct: 67 VVSDILEDGRVVVKSSTGPKFVVNTSQYINEEELKPGARVALNQQTLAIVNVLPTSKDPM 126
Query: 154 VTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGT 213
V VEEKP+V+Y D+GG QIE++RE VELP+L PE F ++GI+PPKGVL YGPPGT
Sbjct: 127 VYGFEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPPGT 186
Query: 214 GKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAI 273
GKTLLA+AVAN+T A FIRV+GSE VQKY+GEGAR+VRE+FQ+A+ K I+F DE+DAI
Sbjct: 187 GKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAI 246
Query: 274 GGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRK 333
R + GD EVQRTM++++ +LDGFD RG++KV+ ATNR D LDPA+LRPGR DR
Sbjct: 247 AARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRI 306
Query: 334 VEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRAR 393
+E LP E R QIFKIHTR M D+ F+ LAR+ ++GADI+++CTEAGMFAIR
Sbjct: 307 IEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREE 366
Query: 394 RKTVTEKDFLDAVNKVIK 411
R VT DF A+ KV+K
Sbjct: 367 RAKVTMLDFTKAIEKVLK 384
>sp|O17071|PRS10_CAEEL Probable 26S protease regulatory subunit 10B OS=Caenorhabditis
elegans GN=rpt-4 PE=1 SV=2
Length = 406
Score = 352 bits (902), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 176/374 (47%), Positives = 253/374 (67%), Gaps = 9/374 (2%)
Query: 36 TSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKII 95
S ++ E +D+ +K+ DL + T S+ D+ S + + Q V K +
Sbjct: 27 NSYRRKLAECRDIEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQ-----IVGEVLKQL 81
Query: 96 SPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVT 155
S + K+++ ++VVG ++ ++++G RV +D I LP ++DP V
Sbjct: 82 S----EEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVY 137
Query: 156 MMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGK 215
M+ E+ +++Y+DVGG EQI ++REVVELP+++PE F ++GI PPKG L +GPPGTGK
Sbjct: 138 KMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGK 197
Query: 216 TLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGG 275
TLLARAVA++ D F++V+ S +V KY+GE ARM+RE+F AR + CIVF DE+DAIGG
Sbjct: 198 TLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGG 257
Query: 276 ARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVE 335
RF +G D E+QRT++E++NQLDGFD+ G +KV+MATNRPDTLDPALLRPGRLDRK+E
Sbjct: 258 RRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIE 317
Query: 336 FGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRK 395
GLP+ +SR +I KIH+ + +I FE + +L + AD+R+VCTEAGMFAIRA R+
Sbjct: 318 IGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAERE 377
Query: 396 TVTEKDFLDAVNKV 409
V ++DF+ AV KV
Sbjct: 378 FVIDEDFMKAVRKV 391
>sp|P46470|PRS8_XENLA 26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2
SV=2
Length = 461
Score = 351 bits (901), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 174/309 (56%), Positives = 224/309 (72%), Gaps = 1/309 (0%)
Query: 103 KYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEK 162
K ++ V KFVV + + D+ RV + + Y + LP K+DP V++M VE+
Sbjct: 79 KVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 138
Query: 163 PDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAV 222
PD TY +GG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAV
Sbjct: 139 PDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAV 198
Query: 223 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 282
A+ TD FIRV GSELVQK++GEGARMVRELF MAR I+F DE+D+I G+R + G
Sbjct: 199 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSI-GSRLEGGS 257
Query: 283 GGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLE 342
GGD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LD ALLRPGR+DRK+EF P+ E
Sbjct: 258 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 317
Query: 343 SRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDF 402
+R I KIH+R MN R I +A L P ++GA+++ VCTEAGM+A+R RR VT++DF
Sbjct: 318 ARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 377
Query: 403 LDAVNKVIK 411
AV KV++
Sbjct: 378 EMAVAKVMQ 386
>sp|Q25544|PRS8_NAEFO 26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2
SV=1
Length = 414
Score = 350 bits (898), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 171/308 (55%), Positives = 223/308 (72%), Gaps = 1/308 (0%)
Query: 105 VINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPD 164
+I + Q K++V + + D+ G+RV + + Y + LP KIDP V++M VE+ PD
Sbjct: 93 LIKISQEGKYIVDIDKSIELKDLTPGVRVALRNDSYALHKILPNKIDPLVSLMKVEKVPD 152
Query: 165 VTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVAN 224
TY VGG EQI++++EV+ELP+ HPE F LGI PKGV+ YGPPGTGKTLLARAVA+
Sbjct: 153 ATYEMVGGLDEQIKEIKEVIELPIKHPELFESLGIAQPKGVIMYGPPGTGKTLLARAVAH 212
Query: 225 RTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV-G 283
TD FIRV GSELVQKY+GEG++MVRELF MAR I+F DE+D+IG R + G G
Sbjct: 213 HTDCTFIRVSGSELVQKYIGEGSKMVRELFVMAREHAPSIIFMDEIDSIGSTRTEGGKGG 272
Query: 284 GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLES 343
GD+EVQRTMLE++NQLDGF++ NIK++MATNR D LDPALLRPGR+DRK+EF P+ +
Sbjct: 273 GDSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILDPALLRPGRIDRKIEFPNPNELA 332
Query: 344 RTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFL 403
R I KIH+R MN R I +A + ++GA+I++ CTEAGMFA+R RR VT++D
Sbjct: 333 RLDILKIHSRRMNLTRGINLRKIASMLGGASGAEIKATCTEAGMFALRERRVHVTQEDLE 392
Query: 404 DAVNKVIK 411
AV KV+K
Sbjct: 393 MAVAKVMK 400
>sp|Q01939|PRS8_YEAST 26S protease regulatory subunit 8 homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RPT6 PE=1
SV=4
Length = 405
Score = 348 bits (892), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 184/398 (46%), Positives = 258/398 (64%), Gaps = 12/398 (3%)
Query: 25 LLKTY--GLGPY-STSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQ 81
+L+T+ G+ PY I++ E +I+ + V L + A + + D+ +
Sbjct: 11 VLETHESGIKPYFEQKIQETELKIRSKTENVRRLEAQRN-----ALNDKVRFIKDELRLL 65
Query: 82 EEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQ 141
+E V KI+S D K ++ V+ K++V + ++ D++ RV + + Y
Sbjct: 66 QEPGSYVGEVIKIVS----DKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYM 121
Query: 142 IQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDP 201
+ L K DP V++M VE+ PD TY+ VGG +QI++++EV+ELP+ HPE F LGI
Sbjct: 122 LHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQ 181
Query: 202 PKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKK 261
PKGV+ YGPPGTGKTLLARAVA+ TD FIRV G+ELVQKY+GEG+RMVRELF MAR
Sbjct: 182 PKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHA 241
Query: 262 ACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLD 321
I+F DE+D+IG R + GGD+EVQRTMLE++NQLDGF+ NIK++MATNR D LD
Sbjct: 242 PSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILD 301
Query: 322 PALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSV 381
PALLRPGR+DRK+EF P + +R +I +IH+R MN R I +A +GAD++ V
Sbjct: 302 PALLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGV 361
Query: 382 CTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSAT 419
CTEAGM+A+R RR VT++DF AV KV+ Q+ + +
Sbjct: 362 CTEAGMYALRERRIHVTQEDFELAVGKVMNKNQETAIS 399
>sp|Q8U4H3|PAN_PYRFU Proteasome-activating nucleotidase OS=Pyrococcus furiosus (strain
ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pan PE=3 SV=1
Length = 396
Score = 346 bits (888), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 160/304 (52%), Positives = 222/304 (73%), Gaps = 1/304 (0%)
Query: 113 KFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 172
+FVV + + + + G RV +D+ I LP DP+V V E+P+VTYND+GG
Sbjct: 82 RFVVRIAPWIDKSKLRPGTRVALDQRTMAIIEILPASKDPAVLGFEVVERPNVTYNDIGG 141
Query: 173 CKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIR 232
K+Q++++RE +ELP+ HPE F ++GIDPPKGVL YGPPG GKTL+A+A+A+ +A FIR
Sbjct: 142 LKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAIAHEVNATFIR 201
Query: 233 VIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
V+GSELV+KY+GEGAR+V ELF++A+ K I+F DE+DAIG R D+ GG+ EV RT+
Sbjct: 202 VVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRLDETTGGEREVNRTL 261
Query: 293 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 352
++++ ++DGFD RGN+KV+ ATNRPD LDPALLRPGR DR +E LPD E R +I K+HT
Sbjct: 262 MQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHT 321
Query: 353 RTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKG 412
R M R + L+A L ++GAD++++ TEAGMFAIR RR VT++DFL A++KV+
Sbjct: 322 RRMKL-RGVDLRLIAELTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAIDKVLGN 380
Query: 413 YQKF 416
+K
Sbjct: 381 EKKI 384
>sp|Q8SQK0|PRS8_ENCCU 26S protease regulatory subunit 8 homolog OS=Encephalitozoon
cuniculi (strain GB-M1) GN=RPT6 PE=1 SV=1
Length = 453
Score = 343 bits (881), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 167/300 (55%), Positives = 220/300 (73%)
Query: 112 AKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVG 171
K++V + V+ +++ G+RV + + Y + LP K+DP V++M VE+ PD TY +G
Sbjct: 140 GKYLVKVEPGVNYDELKAGVRVALRSDSYDVHRILPTKVDPLVSLMMVEKVPDSTYQMIG 199
Query: 172 GCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFI 231
G EQI+++REV+ELP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ T FI
Sbjct: 200 GLDEQIKEIREVIELPIKHPELFENLGIAQPKGVLLYGPPGTGKTLLARAVAHHTQCKFI 259
Query: 232 RVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRT 291
RV GSELVQKY+GEG+R+VRELF MAR I+F DE+D+IG R D G D+EVQRT
Sbjct: 260 RVSGSELVQKYIGEGSRLVRELFIMAREHAPSIIFMDEIDSIGSTRGDSNKGSDSEVQRT 319
Query: 292 MLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIH 351
MLE++NQLDGF++ NIKV+MATNR D LDPALLR GR+DRK+EF P+ +R +I KIH
Sbjct: 320 MLELLNQLDGFESHNNIKVIMATNRIDILDPALLRTGRIDRKIEFPPPNESARLEILKIH 379
Query: 352 TRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIK 411
+R MN + I E +A +GA++++VCTEAGM+A+R RR VT++DF AV+KV+K
Sbjct: 380 SRKMNLTKGIDLETIASKMVGCSGAEVKAVCTEAGMYALRERRVHVTQEDFEMAVHKVLK 439
>sp|C5A6P8|PAN_THEGJ Proteasome-activating nucleotidase OS=Thermococcus gammatolerans
(strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1
Length = 397
Score = 342 bits (876), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 162/318 (50%), Positives = 226/318 (71%), Gaps = 1/318 (0%)
Query: 100 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTV 159
+D + ++ +FVV + + ++ G RV +D+ I LP + DPSV V
Sbjct: 70 DDDRAIVQNYNGPRFVVRIAPWIERDKLKPGSRVALDQRTMAIVELLPTEKDPSVLGFEV 129
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
EKP VTY D+GG + Q+ ++RE VELP+ HPE F K+GI+PPKGVL YGPPG GKTL+A
Sbjct: 130 IEKPRVTYQDIGGLERQLAELREAVELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMA 189
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
+AVAN +A FIRV+GSELV+K++GEGAR+V ELF+MA+ K I+F DE+DAIG R D
Sbjct: 190 KAVANHVNATFIRVVGSELVRKFIGEGARLVHELFEMAKEKAPTIIFIDEIDAIGAKRMD 249
Query: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
+ GG+ EV RT+++++ ++DGFD RGN+KV+ ATNRPD LDPALLRPGR DR +E LP
Sbjct: 250 ETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLP 309
Query: 340 DLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTE 399
D R +I K+HTR MN R++ ++A + ++GAD++++ TEAGMFAIR RR VT+
Sbjct: 310 DFRGRLEILKVHTRKMNL-RNVDLSIIADITEGASGADLKAIATEAGMFAIRDRRTYVTQ 368
Query: 400 KDFLDAVNKVIKGYQKFS 417
+DFL AV+KV+ ++ +
Sbjct: 369 EDFLKAVDKVLGAEKRLA 386
>sp|Q9V287|PAN_PYRAB Proteasome-activating nucleotidase OS=Pyrococcus abyssi (strain GE5
/ Orsay) GN=pan PE=3 SV=2
Length = 396
Score = 342 bits (876), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 160/315 (50%), Positives = 226/315 (71%), Gaps = 3/315 (0%)
Query: 113 KFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 172
+FVV + + + G RV +D+ I LP DP+V V E+P+VTYND+GG
Sbjct: 82 RFVVRIAPWIERDKLRPGARVALDQRTMAIIELLPSSKDPTVLGFEVIERPNVTYNDIGG 141
Query: 173 CKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIR 232
K+Q++++RE +ELP+ HPE F ++GIDPPKGVL YGPPG GKTL+A+A+A+ +A FIR
Sbjct: 142 LKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNATFIR 201
Query: 233 VIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
V+GSELV+KY+GEGAR+V ELF++A+ K I+F DE+DAIG R D+ GG+ EV RT+
Sbjct: 202 VVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTL 261
Query: 293 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 352
++++ ++DGFD RGN+KV+ ATNRPD LDPALLRPGR DR +E LPD E R +I K+HT
Sbjct: 262 MQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHT 321
Query: 353 RTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKG 412
R M +++ ++A + ++GAD++++ TEAGMFAIR RR VT++DFL AV+KV+
Sbjct: 322 RRMKL-KNVDLRVIAEITEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGN 380
Query: 413 YQKF--SATPKYMVY 425
+K T ++Y
Sbjct: 381 ERKLLQQITSHEIIY 395
>sp|Q5JHS5|PAN_PYRKO Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis
(strain ATCC BAA-918 / JCM 12380 / KOD1) GN=pan PE=3
SV=1
Length = 397
Score = 341 bits (875), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 159/318 (50%), Positives = 228/318 (71%), Gaps = 1/318 (0%)
Query: 100 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTV 159
+D + ++ +FVV + + ++ G RV +D+ I LP + DPSV V
Sbjct: 70 DDERAIVQNYNGPRFVVRIAPWIERDKLKPGARVALDQRTMAIVELLPSEKDPSVLGFEV 129
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
E+P VTYND+GG ++Q++++RE +ELP+ HPE F ++GI+PPKGVL YGPPG GKTL+A
Sbjct: 130 IERPKVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYGPPGCGKTLMA 189
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
+AVAN +A FIRV+GSELV+K++GEGAR+V ELF++A+ K I+F DE+DAIG R D
Sbjct: 190 KAVANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMD 249
Query: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
+ GG+ EV RT+++++ ++DGFD RGN+KV+ ATNRPD LDPALLRPGR DR +E LP
Sbjct: 250 ETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLP 309
Query: 340 DLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTE 399
D + R +I K+HTR MN + + ++A + ++GAD++++ TEAGMFAIR RR VT+
Sbjct: 310 DYQGRLEILKVHTRKMNL-KGVDLRVIAEITEGASGADLKAIATEAGMFAIRDRRTYVTQ 368
Query: 400 KDFLDAVNKVIKGYQKFS 417
DFL AV+KVI ++ +
Sbjct: 369 DDFLKAVDKVIGSEKRLA 386
>sp|O26824|PAN_METTH Proteasome-activating nucleotidase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=pan PE=3 SV=1
Length = 410
Score = 340 bits (871), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 158/326 (48%), Positives = 227/326 (69%), Gaps = 4/326 (1%)
Query: 85 PLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
PL +A T+++ +D + + FV+ + +E G RV +++ + I
Sbjct: 72 PLVIATVTEVL----DDHRVAVKSTTGPHFVINYSRFIDRKQLEPGARVALNQQTFSIVD 127
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
LP + DP VT M VEEKPDV+Y +GG +EQ+ +++E VELP+ PE F K+GI+PPKG
Sbjct: 128 VLPSEKDPVVTGMEVEEKPDVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPKG 187
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
VL YGPPGTGKTLLA+AVA+ T+A FI+++ SE V+KY+GEGAR+VR +F++A+ K I
Sbjct: 188 VLLYGPPGTGKTLLAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSI 247
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
+F DE+DA+ R GD EVQRT+++++ +LDGF++RGN+ ++ ATNRPD LDPAL
Sbjct: 248 IFIDEIDAVAAKRLKSSTSGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPAL 307
Query: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTE 384
LRPGR DR +E LP+ + R +I KIHT M ++ ELLAR+ ++GAD++++CTE
Sbjct: 308 LRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTE 367
Query: 385 AGMFAIRARRKTVTEKDFLDAVNKVI 410
AGMFAIR R VT DF+DAV+K++
Sbjct: 368 AGMFAIRDERDEVTMADFMDAVDKIM 393
>sp|O57940|PAN_PYRHO Proteasome-activating nucleotidase OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=pan PE=3 SV=1
Length = 399
Score = 339 bits (869), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 157/304 (51%), Positives = 220/304 (72%), Gaps = 1/304 (0%)
Query: 113 KFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 172
+FVV + + + G RV +D+ + LP DP+V V E+P+VTYND+GG
Sbjct: 85 RFVVRIAPWIDRKKLRPGTRVALDQRTMAVVEILPTSKDPTVLGFEVIERPNVTYNDIGG 144
Query: 173 CKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIR 232
K+Q++++RE +ELP+ HPE F ++GIDPPKGVL YGPPG GKTL+A+A+A+ +A FIR
Sbjct: 145 LKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNATFIR 204
Query: 233 VIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
V+GSELV+KY+GEGAR+V ELF++A+ K I+F DE+DAIG R D+ GG+ EV RT+
Sbjct: 205 VVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTL 264
Query: 293 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 352
++++ ++DGFD RGN+KV+ ATNRPD LDPALLRPGR DR +E LPD E R +I K+HT
Sbjct: 265 MQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHT 324
Query: 353 RTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKG 412
R M + + +A + ++GAD++++ TEAGMFAIR RR VT++DFL AV+KV+
Sbjct: 325 RRMKL-KGVDLRAIAEMTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGN 383
Query: 413 YQKF 416
+K
Sbjct: 384 ERKL 387
>sp|Q8TX03|PAN_METKA Proteasome-activating nucleotidase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pan PE=3
SV=1
Length = 436
Score = 338 bits (868), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 170/338 (50%), Positives = 228/338 (67%), Gaps = 5/338 (1%)
Query: 73 LVSDKQMMQEEQPLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMR 132
L SD Q M++ PL V +I+ +D + ++ KFV + V ++E G
Sbjct: 89 LRSDLQRMKK-PPLIVGTVEEIL----DDGRVIVKSSTGPKFVSNVSPTVDRNELEPGAN 143
Query: 133 VGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPE 192
V +++ + LP + D V M V+E PDV+Y+D+GG EQI ++REVVE P+ PE
Sbjct: 144 VALNQQSMAVVDVLPSEKDSRVLAMEVDESPDVSYDDIGGLDEQIREIREVVEKPLKEPE 203
Query: 193 KFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 252
F K+G++PPKGVL YGPPGTGKTLLA+AVAN DA FIR+ ELVQK++GEGAR+VRE
Sbjct: 204 LFEKVGVEPPKGVLLYGPPGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRE 263
Query: 253 LFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLM 312
LF++AR K I+F DE+DAIG R D GD EVQRT+ +++ ++DGFD +IKV+
Sbjct: 264 LFELAREKAPSIIFIDEIDAIGARRMRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIA 323
Query: 313 ATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPN 372
ATNR D LDPALLRPGR DR ++ LPD E R +IFKIHTR MN D+ + LA++
Sbjct: 324 ATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEG 383
Query: 373 STGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVI 410
++GADI+++CTEAGM AIR R VT DFL AV++V+
Sbjct: 384 ASGADIKAICTEAGMMAIREDRDIVTMDDFLKAVDRVM 421
>sp|B6YXR2|PAN_THEON Proteasome-activating nucleotidase OS=Thermococcus onnurineus
(strain NA1) GN=pan PE=3 SV=1
Length = 398
Score = 335 bits (860), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 153/305 (50%), Positives = 223/305 (73%), Gaps = 1/305 (0%)
Query: 113 KFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGG 172
+FVV + + +++ G RV +D+ I LP + DPSV V E+P V+YND+GG
Sbjct: 84 RFVVRIAPWIERENLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPTVSYNDIGG 143
Query: 173 CKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIR 232
+Q++++RE +ELP+ HPE F K+GI+PPKGVL YGPPG GKTL+A+A+A+ +A FIR
Sbjct: 144 LDKQLQELREAIELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKALAHEVNATFIR 203
Query: 233 VIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTM 292
V+GSELV+K++GEGAR+V ELF++A+ K I+F DE+DAIG R D+ GG+ EV RT+
Sbjct: 204 VVGSELVRKFIGEGARLVHELFELAKEKAPAIIFIDEIDAIGAKRMDETTGGEREVNRTL 263
Query: 293 LEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHT 352
++++ ++DGFD GN+K++ ATNRPD LDPALLRPGR DR +E LP+ +SR +I KIHT
Sbjct: 264 MQLLAEMDGFDPSGNVKIIAATNRPDILDPALLRPGRFDRLIEVPLPNFKSRLEILKIHT 323
Query: 353 RTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKG 412
+ MN + + ++A + ++GAD++++ EAGMFAIR RR+ VT++DFL A+ KV+
Sbjct: 324 KRMNL-KGVDLRIIAEMTEGASGADLKAITMEAGMFAIRDRREYVTQEDFLKAIEKVLGS 382
Query: 413 YQKFS 417
Q+ S
Sbjct: 383 EQRLS 387
>sp|Q9MAK9|PS10B_ARATH 26S protease regulatory subunit S10B homolog B OS=Arabidopsis
thaliana GN=RPT4B PE=2 SV=1
Length = 399
Score = 335 bits (860), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 155/323 (47%), Positives = 223/323 (69%), Gaps = 1/323 (0%)
Query: 100 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTV 159
++ + ++ ++VVG KV + G RV +D I LP ++DP V M
Sbjct: 71 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLH 130
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
E+ +++Y+ VGG +QI ++RE +ELP+++PE F+++GI PPKGVL YGPPGTGKTLLA
Sbjct: 131 EDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLA 190
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
RA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + CI+F DE+DAIGG RF
Sbjct: 191 RAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFS 250
Query: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
+G D E+QRT++E++NQLDGFD G +K++MATNRPD LDPALLRPGRLDRK+E LP
Sbjct: 251 EGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLP 310
Query: 340 DLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTE 399
+ +SR +I KIH + +I +E + +L GAD+R++CTEAGMFAIRA R V
Sbjct: 311 NEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVIH 370
Query: 400 KDFLDAVNKVIKGYQKFSATPKY 422
+DF+ AV K+ + +K ++ Y
Sbjct: 371 EDFMKAVRKLSEA-KKLESSSHY 392
>sp|Q9SEI3|PS10A_ARATH 26S protease regulatory subunit 10B homolog A OS=Arabidopsis
thaliana GN=RPT4A PE=2 SV=1
Length = 399
Score = 334 bits (857), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 155/323 (47%), Positives = 222/323 (68%), Gaps = 1/323 (0%)
Query: 100 EDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTV 159
++ + ++ ++VVG KV + G RV +D I LP ++DP V M
Sbjct: 71 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLH 130
Query: 160 EEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLA 219
E+ +++Y+ VGG +QI ++RE +ELP+++PE F+++GI PPKGVL YGPPGTGKTLLA
Sbjct: 131 EDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLA 190
Query: 220 RAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFD 279
RA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + CI+F DE+DAIGG RF
Sbjct: 191 RAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFS 250
Query: 280 DGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339
+G D E+QRT++E++NQLDGFD G +K++MATNRPD LDPALLRPGRLDRK+E LP
Sbjct: 251 EGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLP 310
Query: 340 DLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTE 399
+ +SR I KIH + +I +E + +L GAD+R++CTEAGMFAIRA R V
Sbjct: 311 NEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAERDYVIH 370
Query: 400 KDFLDAVNKVIKGYQKFSATPKY 422
+DF+ AV K+ + +K ++ Y
Sbjct: 371 EDFMKAVRKLSEA-KKLESSSHY 392
>sp|Q0W257|PAN_UNCMA Proteasome-activating nucleotidase OS=Uncultured methanogenic
archaeon RC-I GN=pan PE=3 SV=1
Length = 417
Score = 334 bits (856), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 159/310 (51%), Positives = 212/310 (68%)
Query: 101 DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVE 160
+ K +I KFVV ++ ++ G +V +++ + LP DPSV M V
Sbjct: 92 NGKMIIKSSTGPKFVVNSSQFINSKEVYPGAKVALNQQSLAVIEVLPTVKDPSVLGMEVV 151
Query: 161 EKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLAR 220
+ P++ Y +GG + QI +++E VELP+L PE F K+GI+PPKGVL YGPPGTGKTLLA+
Sbjct: 152 DSPEIDYQSIGGLEAQINELKETVELPLLKPELFQKVGIEPPKGVLLYGPPGTGKTLLAK 211
Query: 221 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDD 280
AVANRT A FIR+IGSELVQKY+GEGARMVRELF++A+ K I+F DE+D+IG R D
Sbjct: 212 AVANRTKATFIRIIGSELVQKYIGEGARMVRELFELAKEKSPSIIFIDEIDSIGAKRLDS 271
Query: 281 GVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPD 340
GD EVQRT+++++ ++DGFD RGN+++L ATNRPD LDPALLRPGR DR ++ +P
Sbjct: 272 ITSGDREVQRTLVQLLAEMDGFDPRGNVRILAATNRPDILDPALLRPGRFDRMIKVPMPT 331
Query: 341 LESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEK 400
E+R QI KIH R MN D+ +A + S+GAD+ ++ EAGMFAIR R V
Sbjct: 332 AEAREQILKIHARKMNLADDVDLRKIALITDESSGADLSAIVMEAGMFAIRNNRDVVDSS 391
Query: 401 DFLDAVNKVI 410
DF AV KV+
Sbjct: 392 DFNAAVAKVM 401
>sp|P41836|PRS8_SCHPO 26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=let1 PE=3 SV=1
Length = 403
Score = 330 bits (845), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 185/378 (48%), Positives = 248/378 (65%), Gaps = 10/378 (2%)
Query: 34 YSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTK 93
Y+ I+ AE I +K +L ++ GL A + L + Q++QE V K
Sbjct: 20 YTQKIQDAELAI---LQKTQNLRRLEAQRNGLNARVRL-LREEIQLLQEPGSY-VGEVIK 74
Query: 94 IISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPS 153
+ N K ++ V K+VV + + +I+ +RV + + YQ+ LP K+DP
Sbjct: 75 TMGKN----KVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDPL 130
Query: 154 VTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGT 213
V++M VE+ PD TY VGG ++QI++++EV+ELP+ HPE F LGI PKG+L YGPPGT
Sbjct: 131 VSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGT 190
Query: 214 GKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEV-DA 272
GKTLLARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR I+F DE+
Sbjct: 191 GKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 250
Query: 273 IGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDR 332
G GD+EVQRTMLE++NQLDGF+A NIKV+MATNR D LDPALLRPGR+DR
Sbjct: 251 GSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDR 310
Query: 333 KVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA 392
K+EF P E+R +I +IH+R+MN R I + +A ++GA+++ VCTEAGMFA+R
Sbjct: 311 KIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRE 370
Query: 393 RRKTVTEKDFLDAVNKVI 410
RR VT++DF AV KV+
Sbjct: 371 RRVHVTQEDFELAVAKVL 388
>sp|P62335|PRS10_SPETR 26S protease regulatory subunit 10B OS=Spermophilus
tridecemlineatus GN=PSMC6 PE=2 SV=1
Length = 389
Score = 329 bits (843), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 152/309 (49%), Positives = 217/309 (70%)
Query: 101 DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVE 160
+ K+++ ++VVG ++ + ++ G RV +D I LP ++DP V M+ E
Sbjct: 66 EEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHE 125
Query: 161 EKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLAR 220
+ +V+Y+++GG EQI ++REV+ELP+ +PE F ++GI PPKG L YGPPGTGKTLLAR
Sbjct: 126 DPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLAR 185
Query: 221 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDD 280
AVA++ D F++V+ S +V KY+GE AR++RE+F AR + CI+F DE+DAIGG RF +
Sbjct: 186 AVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSE 245
Query: 281 GVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPD 340
G D E+QRT++E++NQ+DGFD +K++MATNRPDTLDPALLRPGRLDRK+ LP+
Sbjct: 246 GTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPN 305
Query: 341 LESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEK 400
++R I KIH + +I +E + +L GAD+R+VCTEAGMFAIRA V ++
Sbjct: 306 EQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQE 365
Query: 401 DFLDAVNKV 409
DF+ AV KV
Sbjct: 366 DFMKAVRKV 374
>sp|P62334|PRS10_MOUSE 26S protease regulatory subunit 10B OS=Mus musculus GN=Psmc6 PE=1
SV=1
Length = 389
Score = 329 bits (843), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 152/309 (49%), Positives = 217/309 (70%)
Query: 101 DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVE 160
+ K+++ ++VVG ++ + ++ G RV +D I LP ++DP V M+ E
Sbjct: 66 EEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHE 125
Query: 161 EKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLAR 220
+ +V+Y+++GG EQI ++REV+ELP+ +PE F ++GI PPKG L YGPPGTGKTLLAR
Sbjct: 126 DPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLAR 185
Query: 221 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDD 280
AVA++ D F++V+ S +V KY+GE AR++RE+F AR + CI+F DE+DAIGG RF +
Sbjct: 186 AVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSE 245
Query: 281 GVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPD 340
G D E+QRT++E++NQ+DGFD +K++MATNRPDTLDPALLRPGRLDRK+ LP+
Sbjct: 246 GTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPN 305
Query: 341 LESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEK 400
++R I KIH + +I +E + +L GAD+R+VCTEAGMFAIRA V ++
Sbjct: 306 EQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQE 365
Query: 401 DFLDAVNKV 409
DF+ AV KV
Sbjct: 366 DFMKAVRKV 374
>sp|P62333|PRS10_HUMAN 26S protease regulatory subunit 10B OS=Homo sapiens GN=PSMC6 PE=1
SV=1
Length = 389
Score = 329 bits (843), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 152/309 (49%), Positives = 217/309 (70%)
Query: 101 DAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVE 160
+ K+++ ++VVG ++ + ++ G RV +D I LP ++DP V M+ E
Sbjct: 66 EEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHE 125
Query: 161 EKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLAR 220
+ +V+Y+++GG EQI ++REV+ELP+ +PE F ++GI PPKG L YGPPGTGKTLLAR
Sbjct: 126 DPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLAR 185
Query: 221 AVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDD 280
AVA++ D F++V+ S +V KY+GE AR++RE+F AR + CI+F DE+DAIGG RF +
Sbjct: 186 AVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSE 245
Query: 281 GVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPD 340
G D E+QRT++E++NQ+DGFD +K++MATNRPDTLDPALLRPGRLDRK+ LP+
Sbjct: 246 GTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPN 305
Query: 341 LESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEK 400
++R I KIH + +I +E + +L GAD+R+VCTEAGMFAIRA V ++
Sbjct: 306 EQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQE 365
Query: 401 DFLDAVNKV 409
DF+ AV KV
Sbjct: 366 DFMKAVRKV 374
>sp|A6UQT3|PAN_METVS Proteasome-activating nucleotidase OS=Methanococcus vannielii
(strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1
Length = 407
Score = 328 bits (842), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 170/385 (44%), Positives = 244/385 (63%), Gaps = 12/385 (3%)
Query: 34 YSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTK 93
YST ++K E ++K+ +K ES D+ + +++E + K
Sbjct: 7 YSTDVQKNEMDLKEFKEKA--YLAELESKVLRLELKNKDITRENVQIKKENEILKRELDK 64
Query: 94 IISP---------NSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
+ P + K V+ F+V L V P DI G RV +++ +
Sbjct: 65 LRIPPLILGTVLDRVNERKAVVKSSTGPNFLVNLSQFVEPDDIVPGARVCLNQQTLAVVE 124
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
LP + D M +EEKPD+ + D+GG QI ++EVVELP+ +PE F K+GI PPKG
Sbjct: 125 VLPKEKDYRAMAMELEEKPDILFGDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKG 184
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
VL YGPPGTGKTLLA+AVA T+A F+RV+GSELV+K++GEGA++VR++F++A+ K CI
Sbjct: 185 VLLYGPPGTGKTLLAKAVARETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCI 244
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
+F DE+DA+ R + GGD EVQRT+++++ ++DGFD+RG++K++ ATNRPD LDPA+
Sbjct: 245 IFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAI 304
Query: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTE 384
LRPGR DR +E PD + R +IFKIHT MN + + +A++ N GADI++VCTE
Sbjct: 305 LRPGRFDRIIEIAAPDEDGRLEIFKIHTDKMNI-KSVDLREIAKMAENMVGADIKAVCTE 363
Query: 385 AGMFAIRARRKTVTEKDFLDAVNKV 409
AGMFAIR R+ VT KDF +A+ KV
Sbjct: 364 AGMFAIREGREYVTTKDFKEALLKV 388
>sp|A6VHR1|PAN_METM7 Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1
Length = 407
Score = 328 bits (841), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 153/304 (50%), Positives = 218/304 (71%), Gaps = 1/304 (0%)
Query: 114 FVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGC 173
F+V L V P DI G RV +++ I LP + D M +EEKPD+++ D+GG
Sbjct: 94 FLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGL 153
Query: 174 KEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRV 233
QI ++EVVELP+ +PE F K+GI PPKGVL YGPPGTGKTLLA+AVA T+A F+RV
Sbjct: 154 NNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRV 213
Query: 234 IGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTML 293
+GSELV+K++GEGA++VR++F++A+ K CI+F DE+DA+ R + GGD EVQRT++
Sbjct: 214 VGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLM 273
Query: 294 EIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTR 353
+++ ++DGFD+RG++K++ ATNRPD LDPA+LRPGR DR +E +PD + R +I KIHT
Sbjct: 274 QLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTE 333
Query: 354 TMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGY 413
MN +++ +A+L N GAD+++VCTEAGMFAIR R+ + DF +A++K+
Sbjct: 334 KMNL-KNVDLREVAKLAENMVGADLKAVCTEAGMFAIREEREFIKMDDFKEAISKITGKK 392
Query: 414 QKFS 417
+K S
Sbjct: 393 EKCS 396
>sp|P62193|PRS4_RAT 26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1
PE=2 SV=1
Length = 440
Score = 327 bits (837), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 161/337 (47%), Positives = 231/337 (68%), Gaps = 6/337 (1%)
Query: 85 PLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
P+ V +II +D +++ ++ V + V +E G V ++ + +
Sbjct: 106 PMSVGTLEEII----DDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIG 161
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
L DP VT+M VE+ P TY D+GG QI++++E VELP+ HPE + ++GI PPKG
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKG 221
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
V+ YGPPGTGKTLLA+AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF++A I
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSI 281
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
VF DE+DAIG R+D GG+ E+QRTMLE++NQLDGFD+RG++KV+MATNR +TLDPAL
Sbjct: 282 VFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPAL 341
Query: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTE 384
+RPGR+DRK+EF LPD +++ +IF+IHT M D+ + L + +GADI+++CTE
Sbjct: 342 IRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTE 401
Query: 385 AGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPK 421
AG+ A+R RR VT +DF + V+ Y+K TP+
Sbjct: 402 AGLMALRERRMKVTNEDFKKSKENVL--YKKQEGTPE 436
>sp|P62192|PRS4_MOUSE 26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1
SV=1
Length = 440
Score = 327 bits (837), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 161/337 (47%), Positives = 231/337 (68%), Gaps = 6/337 (1%)
Query: 85 PLQVARCTKIISPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQI 144
P+ V +II +D +++ ++ V + V +E G V ++ + +
Sbjct: 106 PMSVGTLEEII----DDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIG 161
Query: 145 PLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKG 204
L DP VT+M VE+ P TY D+GG QI++++E VELP+ HPE + ++GI PPKG
Sbjct: 162 VLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKG 221
Query: 205 VLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264
V+ YGPPGTGKTLLA+AVAN+T A F+RV+GSEL+QKY+G+G ++VRELF++A I
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSI 281
Query: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
VF DE+DAIG R+D GG+ E+QRTMLE++NQLDGFD+RG++KV+MATNR +TLDPAL
Sbjct: 282 VFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPAL 341
Query: 325 LRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTE 384
+RPGR+DRK+EF LPD +++ +IF+IHT M D+ + L + +GADI+++CTE
Sbjct: 342 IRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTE 401
Query: 385 AGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPK 421
AG+ A+R RR VT +DF + V+ Y+K TP+
Sbjct: 402 AGLMALRERRMKVTNEDFKKSKENVL--YKKQEGTPE 436
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.137 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 165,226,520
Number of Sequences: 539616
Number of extensions: 7244363
Number of successful extensions: 29489
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1302
Number of HSP's successfully gapped in prelim test: 1172
Number of HSP's that attempted gapping in prelim test: 26801
Number of HSP's gapped (non-prelim): 2958
length of query: 426
length of database: 191,569,459
effective HSP length: 120
effective length of query: 306
effective length of database: 126,815,539
effective search space: 38805554934
effective search space used: 38805554934
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)