Query 014338
Match_columns 426
No_of_seqs 274 out of 1561
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 09:46:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014338.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014338hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fai_A CG5976, isoform B; alph 100.0 3.1E-31 1.1E-35 265.2 21.5 212 199-425 92-324 (330)
2 4f9u_A CG32412; alpha/beta hyd 100.0 3.7E-31 1.3E-35 262.1 21.4 212 199-424 65-298 (312)
3 4fuu_A Leucine aminopeptidase; 100.0 1.7E-29 5.8E-34 250.2 18.8 201 199-420 81-305 (309)
4 3pb6_X Glutaminyl-peptide cycl 100.0 9.9E-29 3.4E-33 247.0 23.0 213 198-424 94-328 (330)
5 3iib_A Peptidase M28; YP_92679 100.0 6.2E-28 2.1E-32 250.3 21.0 238 145-423 193-430 (444)
6 3tc8_A Leucine aminopeptidase; 100.0 1.7E-27 5.9E-32 236.1 21.0 202 199-421 81-307 (309)
7 3gux_A Putative Zn-dependent e 100.0 1E-27 3.5E-32 238.3 17.8 202 199-421 83-311 (314)
8 2afw_A Glutaminyl-peptide cycl 100.0 7.1E-27 2.4E-31 233.4 22.4 209 199-424 87-327 (329)
9 2ek8_A Aminopeptidase; metallo 99.9 8.6E-26 3E-30 232.5 29.5 285 74-423 112-399 (421)
10 1tkj_A Aminopeptidase, SGAP; d 99.9 3.4E-25 1.1E-29 216.6 21.1 198 199-423 63-275 (284)
11 3kas_A Transferrin receptor pr 99.9 1.5E-25 5E-30 241.2 16.6 234 146-405 210-457 (640)
12 3fed_A Glutamate carboxypeptid 99.9 1.2E-24 4E-29 236.4 20.4 253 146-422 247-543 (707)
13 1rtq_A Bacterial leucyl aminop 99.9 6.6E-24 2.3E-28 208.8 20.6 202 199-422 74-285 (299)
14 3k9t_A Putative peptidase; str 99.9 1.3E-20 4.6E-25 190.9 22.4 183 200-422 165-352 (435)
15 4h2k_A Succinyl-diaminopimelat 99.4 9.1E-12 3.1E-16 120.2 20.7 195 200-423 51-266 (269)
16 3t68_A Succinyl-diaminopimelat 99.4 3.8E-12 1.3E-16 122.7 16.8 194 200-424 51-267 (268)
17 2gre_A Deblocking aminopeptida 99.2 3.1E-10 1.1E-14 113.4 14.2 154 241-425 184-347 (349)
18 2wyr_A Cobalt-activated peptid 99.1 4.2E-10 1.5E-14 111.4 14.5 150 241-422 171-331 (332)
19 1vhe_A Aminopeptidase/glucanas 99.1 7.3E-10 2.5E-14 111.7 16.1 153 241-422 182-351 (373)
20 1y0y_A FRV operon protein FRVX 99.1 1.2E-09 3.9E-14 109.4 14.4 151 241-423 180-348 (353)
21 2fvg_A Endoglucanase; TM1049, 99.0 9.4E-10 3.2E-14 109.5 9.2 150 241-423 165-333 (340)
22 1q7l_A Aminoacylase-1; catalys 98.9 5.9E-09 2E-13 95.9 10.5 99 200-308 58-174 (198)
23 2zog_A Cytosolic non-specific 98.7 6.6E-08 2.3E-12 99.9 11.0 101 201-311 83-200 (479)
24 3ct9_A Acetylornithine deacety 98.6 9.9E-08 3.4E-12 95.2 9.8 96 200-311 52-163 (356)
25 3dlj_A Beta-Ala-His dipeptidas 98.6 1.6E-07 5.5E-12 97.6 11.0 103 200-312 89-208 (485)
26 2pok_A Peptidase, M20/M25/M40 98.6 2E-07 6.8E-12 96.6 11.4 102 200-311 92-210 (481)
27 1cg2_A Carboxypeptidase G2; me 98.6 1.3E-07 4.6E-12 95.3 9.7 97 200-311 70-179 (393)
28 3n5f_A L-carbamoylase, N-carba 98.6 1.7E-07 5.9E-12 95.0 10.5 79 201-293 58-141 (408)
29 3pfo_A Putative acetylornithin 98.5 2.4E-07 8.3E-12 94.4 9.9 99 199-312 89-204 (433)
30 1ylo_A Hypothetical protein SF 98.4 3.6E-06 1.2E-10 83.3 15.6 152 241-422 167-335 (348)
31 1vgy_A Succinyl-diaminopimelat 98.3 2.6E-06 8.9E-11 85.7 12.4 98 200-310 51-166 (393)
32 3tx8_A Succinyl-diaminopimelat 98.3 2.5E-06 8.7E-11 84.9 10.6 96 201-310 58-165 (369)
33 1xmb_A IAA-amino acid hydrolas 98.3 3.3E-06 1.1E-10 86.0 11.6 94 200-309 71-175 (418)
34 3pfe_A Succinyl-diaminopimelat 98.3 2.6E-06 8.9E-11 88.2 10.9 99 200-311 77-192 (472)
35 3gb0_A Peptidase T; NP_980509. 98.3 1.3E-06 4.4E-11 87.2 8.3 84 200-293 56-153 (373)
36 3isz_A Succinyl-diaminopimelat 98.2 5.7E-06 1.9E-10 82.1 11.7 84 200-295 48-149 (377)
37 1z2l_A Allantoate amidohydrola 98.2 1.8E-06 6E-11 87.8 7.5 79 201-293 62-145 (423)
38 3ife_A Peptidase T; metallopep 98.2 1.5E-06 5.1E-11 88.9 7.0 98 200-311 80-224 (434)
39 1ysj_A Protein YXEP; M20 famil 98.2 6.9E-06 2.3E-10 83.2 11.5 83 200-294 76-169 (404)
40 2rb7_A Peptidase, M20/M25/M40 98.2 1.6E-06 5.3E-11 86.7 6.2 97 201-311 51-164 (364)
41 2v8h_A Beta-alanine synthase; 98.2 3.5E-06 1.2E-10 87.3 9.0 78 201-293 93-175 (474)
42 3khx_A Putative dipeptidase sa 98.2 4.6E-06 1.6E-10 87.0 9.6 84 202-295 88-186 (492)
43 1vho_A Endoglucanase; structur 98.2 4.3E-05 1.5E-09 75.6 16.1 152 241-423 170-334 (346)
44 3rza_A Tripeptidase; phosphory 98.1 4.2E-06 1.4E-10 84.4 7.7 88 199-294 73-175 (396)
45 1lfw_A PEPV; hydrolase, dipept 98.1 1.2E-05 4.2E-10 82.7 10.8 82 202-295 70-167 (470)
46 2f7v_A Aectylcitrulline deacet 98.1 7.8E-06 2.7E-10 81.6 8.8 86 200-311 58-159 (369)
47 3cpx_A Aminopeptidase, M42 fam 98.0 2.1E-05 7.2E-10 77.5 10.8 150 241-422 163-320 (321)
48 1fno_A Peptidase T; metallo pe 98.0 8E-06 2.7E-10 82.8 6.6 97 200-311 55-197 (417)
49 3ram_A HMRA protein; two-domai 97.9 2.3E-05 7.7E-10 79.3 8.7 93 200-309 61-155 (394)
50 3io1_A Aminobenzoyl-glutamate 97.9 5.2E-05 1.8E-09 77.9 11.3 95 200-309 96-208 (445)
51 3mru_A Aminoacyl-histidine dip 97.9 1.4E-05 4.7E-10 83.3 6.5 94 201-310 57-173 (490)
52 2qyv_A XAA-His dipeptidase; YP 97.8 2.2E-05 7.5E-10 81.4 6.4 83 201-294 54-159 (487)
53 3kl9_A PEPA, glutamyl aminopep 97.5 0.0006 2.1E-08 68.3 12.1 155 237-422 176-343 (355)
54 2vpu_A TET3, 354AA long hypoth 96.4 0.022 7.5E-07 56.9 11.6 153 237-422 179-346 (354)
55 3isx_A Endoglucanase; TM1050, 95.9 0.054 1.8E-06 53.8 11.7 153 238-420 175-341 (343)
56 2wzn_A TET3, 354AA long hypoth 85.9 0.015 5.3E-07 54.7 -6.9 80 201-293 53-139 (354)
57 2ijz_A Probable M18-family ami 78.3 1.9 6.5E-05 43.9 4.8 154 237-412 229-417 (428)
58 2glf_A Probable M18-family ami 77.5 3.1 0.00011 42.6 6.2 159 238-418 244-445 (450)
59 3vat_A Dnpep, aspartyl aminope 74.2 1.9 6.6E-05 44.7 3.6 172 238-419 280-485 (496)
60 1q7l_B Aminoacylase-1; catalys 66.3 27 0.00092 26.6 8.0 77 335-424 3-79 (88)
61 3kl9_A PEPA, glutamyl aminopep 64.0 3.9 0.00013 40.4 3.2 29 200-233 45-73 (355)
62 2vpu_A TET3, 354AA long hypoth 52.5 7.5 0.00026 38.4 3.0 26 200-233 52-77 (354)
63 3isx_A Endoglucanase; TM1050, 45.5 11 0.00038 37.0 2.9 26 200-233 53-78 (343)
64 1y7e_A Probable M18-family ami 33.2 11 0.00036 38.7 0.5 161 238-418 250-454 (458)
65 3gb0_A Peptidase T; NP_980509. 29.4 1.1E+02 0.0039 29.1 7.3 74 334-423 298-371 (373)
66 3rza_A Tripeptidase; phosphory 26.2 1.4E+02 0.0049 28.8 7.4 74 334-423 318-391 (396)
67 1nu0_A Hypothetical protein YQ 23.0 73 0.0025 26.9 3.9 56 88-155 41-96 (138)
68 3isz_A Succinyl-diaminopimelat 20.8 2.1E+02 0.0072 27.0 7.3 75 334-424 300-375 (377)
69 2glj_A Probable M18-family ami 20.4 35 0.0012 34.9 1.6 44 238-289 256-299 (461)
No 1
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=99.97 E-value=3.1e-31 Score=265.18 Aligned_cols=212 Identities=12% Similarity=0.116 Sum_probs=151.2
Q ss_pred CcceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCcceEEEEEe
Q 014338 199 TITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLT 278 (426)
Q Consensus 199 ~~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p~~~~GAddn~SG~a~LLElar~~~~l~~~~~~~p~~~I~F~~~ 278 (426)
...||+|+++|.. +++|||+|||||++..+...+||+|||||+|+|||+||.|++... ++.+|+++|+|++|
T Consensus 92 ~~~Nii~~~~~~~-------~~~i~l~aHyDs~~~~~~~~~GA~DnasG~A~lLE~Ar~l~~~~~-~~~~p~rtI~fv~f 163 (330)
T 4fai_A 92 HFHNIIATLNPNA-------ERYLVLSCHYDSKYMPGVEFLGATDSAVPCAMLLNLAQVLQEQLK-PLKKSKLSLMLLFF 163 (330)
T ss_dssp EEEEEEEESCTTC-------SEEEEEEEECCCCCCTTSCCCCTTTTHHHHHHHHHHHHHTHHHHG-GGGTSSEEEEEEEE
T ss_pred eEEEEEEEECCCC-------CcEEEEEEeecccccccCCCCCCCCccHhHHHHHHHHHHHHHhhh-ccCCCCccEEEEEe
Confidence 4689999999853 679999999999987656678999999999999999999998753 34678999999999
Q ss_pred CCCCCCC--------cchHHHHHhccHh-hhcCeeEEEEeccccCCCCceeEEecCCCcchHHHHHHHHHHHHHHHhCce
Q 014338 279 SGGPYNY--------NGTHKWLRSFDQR-LRESIDYAICLNSVGSWNNELWIHVSKPPENAYIKQIFEGFTNVAEELGFK 349 (426)
Q Consensus 279 ~gEe~g~--------~GS~~~v~~~~~~-~~~~i~~vinlD~iG~~~~~l~~hvs~~p~~~~~~~~~~~l~~~a~~~~~~ 349 (426)
+|||.|+ +||++|++++... .+++|.++||+||+|..+..++.+... ... ....+..++......+.-
T Consensus 164 dgEE~Gl~~~~~~~llGS~~~a~~~~~~~~~~~i~~~inlDmiG~~~~~~~~~~~~--t~~-~~~~~~~~~~~~~~~~~~ 240 (330)
T 4fai_A 164 DGEEAFEEWGPKDSIYGARHLAKKWHHEGKLDRIDMLVLLDLLGAPDPAFYSFFEN--TES-WYMRIQSVETRLAKLQLL 240 (330)
T ss_dssp SCCSCSSSCBTTBSCHHHHHHHHHHHHTTCSTTEEEEEEECSCSSSSCCEEECCGG--GHH-HHHHHHHHHHHHHHTTC-
T ss_pred ccccccccccccchhhhhHHHHhcchhccchhceeEEEEeccCccCCCCceeeccC--cch-HHHHHHHHHHHhhhhhhh
Confidence 9999985 7999999986532 357999999999999873333332221 111 111111111111111110
Q ss_pred ecc---------c---cccccCCCCCCCcchhhhhcCCCeEEEEeecCCCCCccccCCCCCCCcCCCCHHHHHHHHHHHH
Q 014338 350 VGL---------K---HKKINISNPRVAWEHEQFSRLRVTAATLSELSAAPELLESTGGLLDSRHFVDETSFIRSVKLVA 417 (426)
Q Consensus 350 ~~~---------~---~~ki~~~~~~~~~dHe~F~~~gIPa~tls~~~~~~~~~~~~~s~~Dt~d~ld~~~L~~~~~~ia 417 (426)
-.. . ............+||.+|.++|||++.+.+.+.++ .|||+.||+|+||++.+.+.+++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~SDH~pF~~~GIP~l~~i~~~~~~----~yHT~~Dt~d~iD~~tl~~~~~ii~ 316 (330)
T 4fai_A 241 ERYASSGVAQRDPTRYFQSQAMRSSFIEDDHIPFLRRNVPILHLIPVPFPS----VWHTPDDNASVIDYATTDNLALIIR 316 (330)
T ss_dssp --------------CCEEEEEETTCCCCSTTHHHHTTTCCEEEECCSSCCT----TTTSTTSSGGGCCHHHHHHHHHHHH
T ss_pred hhhhccccccccccccccccCCCCCCCCCchHHHHHCCCCEEEEECCCCCC----CCCCCcCChhhCCHHHHHHHHHHHH
Confidence 000 0 00000011123579999999999999998765432 4679999999999999999999998
Q ss_pred HHHHHHhc
Q 014338 418 ESLAVSLI 425 (426)
Q Consensus 418 e~la~~~~ 425 (426)
.-++-||+
T Consensus 317 ~Fv~EyL~ 324 (330)
T 4fai_A 317 LFALEYLL 324 (330)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 88887775
No 2
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=99.97 E-value=3.7e-31 Score=262.12 Aligned_cols=212 Identities=14% Similarity=0.108 Sum_probs=151.1
Q ss_pred CcceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCC-CCCCCCCCCchhHHHHHHHHHHHHHhccCC-CCCCCcceEEEE
Q 014338 199 TITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAA-PALSVGSDSNGSGVVALLEVARLFSLLYSN-PKTRGRYNILFG 276 (426)
Q Consensus 199 ~~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~-p~~~~GAddn~SG~a~LLElar~~~~l~~~-~~~~p~~~I~F~ 276 (426)
+..||+|+++|.. +++|||+|||||++.. ....+||+|||||+|+|||+||+|+++... .+.+|+++|+|+
T Consensus 65 ~~~Nii~~~~~~~-------~~~vvl~aHyDs~~~~~~~~~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv 137 (312)
T 4f9u_A 65 TFANVVGTINPQA-------QNFLALACHYDSKYFPNDPGFVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLI 137 (312)
T ss_dssp EEEEEEEEESTTS-------SEEEEEEEECCCCCCTTCTTCCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEE
T ss_pred eEEEEEEEECCCC-------CceEEEEEEEecCCCCCCCCCCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEE
Confidence 4789999999853 6799999999999763 245789999999999999999999986432 235789999999
Q ss_pred EeCCCCCC--------CcchHHHHHhccH-----------hhhcCeeEEEEeccccCCCCceeEEecCCCcchHHHHHHH
Q 014338 277 LTSGGPYN--------YNGTHKWLRSFDQ-----------RLRESIDYAICLNSVGSWNNELWIHVSKPPENAYIKQIFE 337 (426)
Q Consensus 277 ~~~gEe~g--------~~GS~~~v~~~~~-----------~~~~~i~~vinlD~iG~~~~~l~~hvs~~p~~~~~~~~~~ 337 (426)
+|+|||.| ++||++|++++.. ..++++.++||+||+|..+..+....... ......+.
T Consensus 138 ~fdaEE~G~~~~~~~~L~GS~~~a~~~~~~~~~~~~~~~~~~~~~i~~~inlDmvg~~~~~~~~~~~~~---~~~~~~~~ 214 (312)
T 4f9u_A 138 FFDGEEAFKEWTDADSVYGSKHLAAKLASKRSGSQAQLAPRNIDRIEVLVLLDLIGARNPKFSSFYENT---DGLHSSLV 214 (312)
T ss_dssp EESCCSCSSSCSSSSSCHHHHHHHHHHHHCBC-------CBGGGGEEEEEEEESCCSSSCCEEECCGGG---HHHHHHHH
T ss_pred EecCccccccCCccccccChHHHHHHHHhhccccccccccccccceeeeeeeeccccCCCCceEEEecc---chhhhHHH
Confidence 99999988 9999999998642 12468999999999998743333322211 11122222
Q ss_pred HHHHHHHHhCceeccccccc-cCCCCCCCcchhhhhcCCCeEEEEeecCCCCCccccCCCCCCCcCCCCHHHHHHHHHHH
Q 014338 338 GFTNVAEELGFKVGLKHKKI-NISNPRVAWEHEQFSRLRVTAATLSELSAAPELLESTGGLLDSRHFVDETSFIRSVKLV 416 (426)
Q Consensus 338 ~l~~~a~~~~~~~~~~~~ki-~~~~~~~~~dHe~F~~~gIPa~tls~~~~~~~~~~~~~s~~Dt~d~ld~~~L~~~~~~i 416 (426)
.+.+.....+.......... ........+||.+|.++|||++.+.+.... + .|||..||+|+||++.|.+.++++
T Consensus 215 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~SDH~pF~~~GIP~l~~~~~~~~--~--~yHt~~Dt~d~id~~~l~~~~~i~ 290 (312)
T 4f9u_A 215 QIEKSLRTAGQLEGNNNMFLSRVSGGLVDDDHRPFLDENVPVLHLVATPFP--D--VWHTPRDNAANLHWPSIRNFNRVF 290 (312)
T ss_dssp HHHHHHHHTTCSSSSCCCEEEEECSSCCCCTTHHHHTTTCCEEEEECSSCC--T--TTTSTTCSGGGCCHHHHHHHHHHH
T ss_pred HHHHHHHHhccccccccccccccCCCCCCCchHHHHHCCCCEEEEECCCCC--C--CCCCCccChhhCCHHHHHHHHHHH
Confidence 22222222221111000000 111123357999999999999999876432 2 468999999999999999999999
Q ss_pred HHHHHHHh
Q 014338 417 AESLAVSL 424 (426)
Q Consensus 417 ae~la~~~ 424 (426)
+..|+.+|
T Consensus 291 ~~fv~e~l 298 (312)
T 4f9u_A 291 RNFVYQYL 298 (312)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98888775
No 3
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=99.96 E-value=1.7e-29 Score=250.16 Aligned_cols=201 Identities=20% Similarity=0.254 Sum_probs=146.4
Q ss_pred CcceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCC---------CCCCCCCCchhHHHHHHHHHHHHHhccCCCCCCC
Q 014338 199 TITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP---------ALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRG 269 (426)
Q Consensus 199 ~~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p---------~~~~GAddn~SG~a~LLElar~~~~l~~~~~~~p 269 (426)
...||+|+++|.. +++|||+|||||.+..+ ...+||+|||||+|+|||+||+|++. +|
T Consensus 81 ~~~Nii~~~~g~~-------~~~i~l~aH~Ds~~~~~~~~~~~~~~~~~~GA~D~aSG~a~lLE~ar~l~~~------~~ 147 (309)
T 4fuu_A 81 KARNIIGSYKPES-------KKRIALFAHWDTRPWADNDADEKNHHTPILGANDGASGVGALLEIARLVNQQ------QP 147 (309)
T ss_dssp EEEEEEEEESTTC-------SSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHS------CC
T ss_pred eeEEEEEEECCCC-------CceEEEEeecCCCCCCCCccccccccCCcCCcccCchhHHHHHHHHHHHhhc------CC
Confidence 4789999999854 57999999999997643 35689999999999999999999875 36
Q ss_pred cceEEEEEeCCCCCCC--------------cchHHHHHhccHhhhcCeeEEEEeccccCCCCceeEEecCCCcchHHHHH
Q 014338 270 RYNILFGLTSGGPYNY--------------NGTHKWLRSFDQRLRESIDYAICLNSVGSWNNELWIHVSKPPENAYIKQI 335 (426)
Q Consensus 270 ~~~I~F~~~~gEe~g~--------------~GS~~~v~~~~~~~~~~i~~vinlD~iG~~~~~l~~hvs~~p~~~~~~~~ 335 (426)
+++|+|++|+|||.|+ +||++|++++.. ..+++.++||+||+|.. +..+...... ......+
T Consensus 148 ~~~i~~~~~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~~~~~-~~~~i~~~inlDmvG~~-~~~~~~~~~~--~~~~~~~ 223 (309)
T 4fuu_A 148 ELGIDIIFLDAEDYGTPQFYEGKHKEEAWCLGSQYWSRNPHV-QGYNARFGILLDMVGGE-NSVFLKEGYS--EEFAPDI 223 (309)
T ss_dssp SSEEEEEEECSSSCCCCTTCCSCCCGGGSCHHHHHHHHSCSS-TTCCCSEEEEECSCCBT-TCCEEECHHH--HHHCHHH
T ss_pred CCceEEEeecccccCccccccchhhhhhhhcchhHHHhcccc-cCcceEEEEeeeccCCC-CCceEeecCc--hhhhHHH
Confidence 8999999999999995 899999998654 36899999999999986 4444332211 1112344
Q ss_pred HHHHHHHHHHhCceeccccccccCCCCCCCcchhhhhc-CCCeEEEEeecCCCCCccccCCCCCCCcCCCCHHHHHHHHH
Q 014338 336 FEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQFSR-LRVTAATLSELSAAPELLESTGGLLDSRHFVDETSFIRSVK 414 (426)
Q Consensus 336 ~~~l~~~a~~~~~~~~~~~~ki~~~~~~~~~dHe~F~~-~gIPa~tls~~~~~~~~~~~~~s~~Dt~d~ld~~~L~~~~~ 414 (426)
.+.+...++..+......... .....+||.+|.+ .|||++.+........+...|||..||+|+||.+.|+...+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~----~~~~~sDh~~F~~~~GIP~l~~~~~~~~~~~~~~yHT~~Dt~d~id~~~L~~vg~ 299 (309)
T 4fuu_A 224 NKKVWKAAKKAGYGKTFIDER----GDTITDDHLFINRLARIKTIDIIPNDPETGFPPTWHTIHDNMDHIDKNTLKAVGQ 299 (309)
T ss_dssp HHHHHHHHHHTTCTTTEEEEE----CCCCCCHHHHHHHHTCCCEEEECBC----CCCTTTTSTTCSGGGBCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCcccccccC----CCCCCCChHHHHhcCCCCEEEEeccCCCCCCCCCCCCcccchhhCCHHHHHHHHH
Confidence 444544455444322211111 1223579999997 79999988754332222235789999999999999998888
Q ss_pred HHHHHH
Q 014338 415 LVAESL 420 (426)
Q Consensus 415 ~iae~l 420 (426)
.+.+.|
T Consensus 300 ~vl~~l 305 (309)
T 4fuu_A 300 TVLEVI 305 (309)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877665
No 4
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=99.96 E-value=9.9e-29 Score=246.99 Aligned_cols=213 Identities=15% Similarity=0.139 Sum_probs=152.4
Q ss_pred CCcceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCC--CCCCCCCCCchhHHHHHHHHHHHHHhccCCC-CCCCcceEE
Q 014338 198 PTITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAA--PALSVGSDSNGSGVVALLEVARLFSLLYSNP-KTRGRYNIL 274 (426)
Q Consensus 198 ~~~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~--p~~~~GAddn~SG~a~LLElar~~~~l~~~~-~~~p~~~I~ 274 (426)
....||+|+++|.. .++||++|||||.+.. ....+||+|||||+++|||+||.|.+..... +.+|+++|.
T Consensus 94 ~~~~Nvia~~~g~~-------~~~ivl~aH~Dsv~~~~g~~~~~GA~D~asGva~lLe~ar~l~~~~~~~~~~~~~~~i~ 166 (330)
T 3pb6_X 94 VDFGNVVATLDPRA-------ARHLTLACHYDSKLFPPGSTPFVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQ 166 (330)
T ss_dssp EEEEEEEEESCTTS-------SEEEEEEEECCCCCCCTTSCCCCCTTTTHHHHHHHHHHHHHTHHHHHHHHHTTCSEEEE
T ss_pred ccceEEEEEECCCC-------CceEEEEeccCCCCCCCCCcCcCCCcCChHHHHHHHHHHHHHHHHHhhcccCCCCCcEE
Confidence 34789999999863 5899999999997642 2357999999999999999999998752100 135799999
Q ss_pred EEEeCCCCC--------CCcchHHHHHhccH-------hhhcCeeEEEEeccccCCCCceeEEecCCCcchHHHHHHHHH
Q 014338 275 FGLTSGGPY--------NYNGTHKWLRSFDQ-------RLRESIDYAICLNSVGSWNNELWIHVSKPPENAYIKQIFEGF 339 (426)
Q Consensus 275 F~~~~gEe~--------g~~GS~~~v~~~~~-------~~~~~i~~vinlD~iG~~~~~l~~hvs~~p~~~~~~~~~~~l 339 (426)
|++|+|||. |++||++|++++.. ..+++|.++||+||+|+.+..++.+. +......+.+..+
T Consensus 167 fv~~~~EE~f~~w~~~~gl~GS~~~a~~~~~~~~~~~~~~~~~i~~~inlDmiG~~~~~~~~~~---~~t~~~~~~l~~i 243 (330)
T 3pb6_X 167 LLFLDGEEALKEWGPKDSLYGSRHLAQLMESIPHSPGPTRIQAIELFMLLDLLGAPNPTFYSHF---PRTVRWFHRLRSI 243 (330)
T ss_dssp EEEESCCSCSSCCSTTSSCHHHHHHHHHHHHSBCSSCSBTTTTEEEEEEEESCSSSSCCBCCCC---GGGHHHHHHHHHH
T ss_pred EEEEcCcccccccCCCCCCccHHHHHHHHHhcCCccccchhhCeEEEEeccCCCCCCCCceeec---CcchHHHHHHHHH
Confidence 999999999 99999999997653 13689999999999999733332211 1111122222333
Q ss_pred HHHHHHhCceecc-ccccc---cCCCCCCCcchhhhhcCCCeEEEEeecCCCCCccccCCCCCCCcCCCCHHHHHHHHHH
Q 014338 340 TNVAEELGFKVGL-KHKKI---NISNPRVAWEHEQFSRLRVTAATLSELSAAPELLESTGGLLDSRHFVDETSFIRSVKL 415 (426)
Q Consensus 340 ~~~a~~~~~~~~~-~~~ki---~~~~~~~~~dHe~F~~~gIPa~tls~~~~~~~~~~~~~s~~Dt~d~ld~~~L~~~~~~ 415 (426)
++.+++.|.-... ...+. ........+||.+|.++|||++.+.+.+.+ ..|||..||+++||++.|.+.+++
T Consensus 244 ~~~~~~~g~~~~~p~~~~~f~~~~~~~~~~SDH~pF~~~GIP~~~~~~~~f~----~~yHt~~Dt~d~id~~~l~~~~~i 319 (330)
T 3pb6_X 244 EKRLHRLNLLQSHPQEVMYFQPGEPFGSVEDDHIPFLRRGVPVLHLISTPFP----AVWHTPADTEVNLHPPTVHNLCRI 319 (330)
T ss_dssp HHHHHHTTCCSSCCSSCSSBCSSCSSCCCSCTTHHHHTTTCCEEEEECSSCC----TTTTSTTCSGGGSCHHHHHHHHHH
T ss_pred HHHHHHcCccccCCcccccccccccCCCCCCchHhHHHCCCCEEEEEcCCCC----CCCCCCcCchhhCCHHHHHHHHHH
Confidence 3333333321100 00000 011223468999999999999999876443 246899999999999999999999
Q ss_pred HHHHHHHHh
Q 014338 416 VAESLAVSL 424 (426)
Q Consensus 416 iae~la~~~ 424 (426)
++.-++-||
T Consensus 320 ~~~fv~Eyl 328 (330)
T 3pb6_X 320 LAVFLAEYL 328 (330)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999998876
No 5
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=99.96 E-value=6.2e-28 Score=250.34 Aligned_cols=238 Identities=15% Similarity=0.101 Sum_probs=174.5
Q ss_pred CCCCcEEEeeChhHHHHHHHHhccCCCCCCCCccccCCeEEEeccCCCcccCCCCcceEEEEEcCcCCCCCCCCCCEEEE
Q 014338 145 KLPYPVYFAFENDEIDAVLDDVKKNDATGQPATATTGGYKLVIPIAEPKKVASPTITNIQGWLQGLKADGDANQLPTIAI 224 (426)
Q Consensus 145 ~~~~Pvyf~~~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~~~s~~~~~~~~~~~~~NV~g~l~G~~~~~~~~~~~~Ivi 224 (426)
...||+..+.. ++.+.|++.++... +. ...+.+. ..........||+|+++|... ++++|++
T Consensus 193 ~~~IP~~~Is~-~da~~L~~~l~~g~----~~-----~v~l~~~---~~~~~~~~~~Nvi~~~~g~~~-----~~~~i~~ 254 (444)
T 3iib_A 193 VTAIPAAAISN-PDADLINAMLKRDK----EV-----VISLELG---SERRGETTSYNVIAEVKGSTK-----ADEIVLI 254 (444)
T ss_dssp SCCCCEEEECH-HHHHHHHHHHTTTC----CC-----EEEEEEE---EEEEEEEEEEEEEEEECCSTE-----EEEEEEE
T ss_pred CCCCCeEEecH-HHHHHHHHHHhCCC----Ce-----EEEEEEe---eeEcCCceeEEEEEEEeCCCC-----CCCEEEE
Confidence 36799999986 58888888876421 11 1222221 111224468999999999752 3689999
Q ss_pred EecCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCcceEEEEEeCCCCCCCcchHHHHHhccHhhhcCee
Q 014338 225 VASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESID 304 (426)
Q Consensus 225 ~AHyDs~g~~p~~~~GAddn~SG~a~LLElar~~~~l~~~~~~~p~~~I~F~~~~gEe~g~~GS~~~v~~~~~~~~~~i~ 304 (426)
+|||||++. .+||+||+||++++||+||.|++.. ++|+++|+|++|++||.|+.||++|++++.. .++++.
T Consensus 255 ~aH~Ds~~~----g~Ga~D~~sG~a~~le~a~~l~~~~----~~~~~~i~f~~~~~EE~gl~Gs~~~~~~~~~-~~~~~~ 325 (444)
T 3iib_A 255 GAHLDSWDE----GTGAIDDGAGVAIVTAAAKHILDLP----QKPERTIRVVLYAAEELGLLGGKTYAKEHEA-ELEKHY 325 (444)
T ss_dssp EEECCCCSS----SCCTTTTHHHHHHHHHHHHHHHTSS----SCCSEEEEEEEESCGGGTSHHHHHHHHHTGG-GGGGEE
T ss_pred EeecccCCC----CCCCccchHHHHHHHHHHHHHHhcC----CCCCCeEEEEEECCcccCCcCHHHHHHhhHh-hhhcee
Confidence 999999976 6899999999999999999999863 5789999999999999999999999998854 367899
Q ss_pred EEEEeccccCCCCceeEEecCCCcchHHHHHHHHHHHHHHHhCceeccccccccCCCCCCCcchhhhhcCCCeEEEEeec
Q 014338 305 YAICLNSVGSWNNELWIHVSKPPENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQFSRLRVTAATLSEL 384 (426)
Q Consensus 305 ~vinlD~iG~~~~~l~~hvs~~p~~~~~~~~~~~l~~~a~~~~~~~~~~~~ki~~~~~~~~~dHe~F~~~gIPa~tls~~ 384 (426)
++||+||.|.. ...+....++ ....+.+.+.+..+..++... .......+||.+|.++|||++.+...
T Consensus 326 ~~~n~D~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~-------~~~~~~~SD~~~f~~~GiP~~~l~~~ 393 (444)
T 3iib_A 326 IAAESDFGAGP--IYQIDWRVAD---TAHSPVINAMKVAEPLGVAAG-------NNKASGGPDVSMLPALGVPVASLRQD 393 (444)
T ss_dssp EEEECCSTTCC--EEEEEEECCH---HHHHHHHHHGGGGGGGTCEEC-------CSCCCCCGGGTTSGGGTCCEEEEEEC
T ss_pred EEEECcCCCCc--ceEEEeecCh---hhHHHHHHHHHHHhhcCCccc-------cCCCCCCCccHHHHHCCCCEEEeecC
Confidence 99999998753 3222222222 234555555443333444321 11123368999999999999999875
Q ss_pred CCCCCccccCCCCCCCcCCCCHHHHHHHHHHHHHHHHHH
Q 014338 385 SAAPELLESTGGLLDSRHFVDETSFIRSVKLVAESLAVS 423 (426)
Q Consensus 385 ~~~~~~~~~~~s~~Dt~d~ld~~~L~~~~~~iae~la~~ 423 (426)
... +..+|||..||+++||++.|.+++++++..+...
T Consensus 394 ~~~--~~~~yHt~~Dt~d~id~~~l~~~~~~~~~~v~~l 430 (444)
T 3iib_A 394 GSD--YFDYHHTPNDTLDKINPEALAQNVAVYAQFAWVM 430 (444)
T ss_dssp CTT--GGGTTTSTTCCGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred CCc--CCCCCCCCccccccCCHHHHHHHHHHHHHHHHHH
Confidence 332 2235789999999999999999999988877653
No 6
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=99.95 E-value=1.7e-27 Score=236.10 Aligned_cols=202 Identities=19% Similarity=0.197 Sum_probs=152.2
Q ss_pred CcceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCC---------CCCCCCCCchhHHHHHHHHHHHHHhccCCCCCCC
Q 014338 199 TITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP---------ALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRG 269 (426)
Q Consensus 199 ~~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p---------~~~~GAddn~SG~a~LLElar~~~~l~~~~~~~p 269 (426)
...||+|+++|.. ++.|+++|||||++..+ .+.+||+||+||++++||+||.|.+.. |
T Consensus 81 ~~~Nvia~~~g~~-------~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~Ga~D~~sGva~~Le~ar~l~~~~------~ 147 (309)
T 3tc8_A 81 EARNIIGSFDPEN-------SKRVLLFAHWDSRPYSDHDPDPSKHRTPLDGADDGGSGVGALLEIARQIGQKA------P 147 (309)
T ss_dssp EEEEEEEEESTTC-------SSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHSC------C
T ss_pred cceEEEEEECCCC-------CceEEEEecccCCCCCCCCccccCCCccccCcccchHhHHHHHHHHHHHHhCC------C
Confidence 4689999999843 58999999999998642 344899999999999999999998762 6
Q ss_pred cceEEEEEeCCCCCCC-------------cchHHHHHhccHhhhcCeeEEEEeccccCCCCceeEEecCCCcchHHHHHH
Q 014338 270 RYNILFGLTSGGPYNY-------------NGTHKWLRSFDQRLRESIDYAICLNSVGSWNNELWIHVSKPPENAYIKQIF 336 (426)
Q Consensus 270 ~~~I~F~~~~gEe~g~-------------~GS~~~v~~~~~~~~~~i~~vinlD~iG~~~~~l~~hvs~~p~~~~~~~~~ 336 (426)
+++|.|++|++||.|+ +||++|++++... .+++.++||+||+|..+..++.... .......++
T Consensus 148 ~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~~~~~-~~~~~~~inlD~~G~~~~~~~~~~~---~~~~~~~l~ 223 (309)
T 3tc8_A 148 GIGIDIIFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKNPHVP-NYTAEYGILLDMVGGKNATFFKEQQ---SLRAAAPIV 223 (309)
T ss_dssp SSEEEEEEECSCSCSCCTTCCSCCTTCSCHHHHHHHHSCSST-TCCCSEEEEEESCCBTTCCEEECHH---HHHHHHHHH
T ss_pred CCcEEEEEECccccccccccccccccccchhHHHHHhCCCcc-ccceEEEEEecccCCCCCceeeccc---ccchHHHHH
Confidence 8999999999999999 9999999986543 6789999999999997333322211 111124566
Q ss_pred HHHHHHHHHhCceeccccccccCCCCCCCcchhhhhc-CCCeEEEEeecCCC--CCccccCCCCCCCcCCCCHHHHHHHH
Q 014338 337 EGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQFSR-LRVTAATLSELSAA--PELLESTGGLLDSRHFVDETSFIRSV 413 (426)
Q Consensus 337 ~~l~~~a~~~~~~~~~~~~ki~~~~~~~~~dHe~F~~-~gIPa~tls~~~~~--~~~~~~~~s~~Dt~d~ld~~~L~~~~ 413 (426)
+.+++.++..|......... .....+||.+|.+ +|||++.+...... ..+...|||..||+++||++.|.+.+
T Consensus 224 ~~~~~~a~~~g~~~~f~~~~----~g~~~sDh~~f~~~~GiP~~~li~~~~~~~~~~~~~~Ht~~Dt~d~id~~~l~~~~ 299 (309)
T 3tc8_A 224 EMVWSAARDLGYGKYFINAA----GGAITDDHQYVISGRNIPSIDIINYDPESKTGFASYWHTQKDNMENIDRETLKAAG 299 (309)
T ss_dssp HHHHHHHHHHTCTTTEEEEE----CCCCCCHHHHHHHHHCCCEEEEEBCCTTSSSSSCTTTTSTTCSGGGBCHHHHHHHH
T ss_pred HHHHHHHHHcCCcceeccCC----CCCCCCccHHHHhcCCCCEEEEecccCcccCCCCCCCCCCcCChhhCCHHHHHHHH
Confidence 66666666666532221111 1234689999999 89999999765210 11222578999999999999999999
Q ss_pred HHHHHHHH
Q 014338 414 KLVAESLA 421 (426)
Q Consensus 414 ~~iae~la 421 (426)
+++.+.|-
T Consensus 300 ~~~~~~vy 307 (309)
T 3tc8_A 300 QTVLEVIY 307 (309)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99988764
No 7
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.95 E-value=1e-27 Score=238.25 Aligned_cols=202 Identities=18% Similarity=0.203 Sum_probs=132.6
Q ss_pred CcceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCC---------CCCCCCCCchhHHHHHHHHHHHHHhccCCCCCCC
Q 014338 199 TITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP---------ALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRG 269 (426)
Q Consensus 199 ~~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p---------~~~~GAddn~SG~a~LLElar~~~~l~~~~~~~p 269 (426)
...||+|+++|.. +++||++|||||++..+ .+.+||+||+||++++||+||.|.+. +|
T Consensus 83 ~~~Nvia~~~g~~-------~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~GA~D~~sGva~~Le~ar~l~~~------~~ 149 (314)
T 3gux_A 83 KSRNIIGAYKPES-------KKRILLCAHWDSRPYADNDPDPKNHHTPILGVNDGASGVGVLLEIARQIQKE------QP 149 (314)
T ss_dssp EEEEEEEEESTTC-------SSEEEEEEECCCCC--------------------CHHHHHHHHHHHHHHHHS------CC
T ss_pred cceEEEEEECCCC-------CceEEEEccccCCCcCCCCcccccCCcccCCCcccHHHHHHHHHHHHHHHhC------CC
Confidence 4689999999843 57999999999998631 34589999999999999999999876 26
Q ss_pred cceEEEEEeCCCCCCC--------------cchHHHHHhccHhhhcCeeEEEEeccccCCCCceeEEecCCCcchHHHHH
Q 014338 270 RYNILFGLTSGGPYNY--------------NGTHKWLRSFDQRLRESIDYAICLNSVGSWNNELWIHVSKPPENAYIKQI 335 (426)
Q Consensus 270 ~~~I~F~~~~gEe~g~--------------~GS~~~v~~~~~~~~~~i~~vinlD~iG~~~~~l~~hvs~~p~~~~~~~~ 335 (426)
+++|.|++|++||.|+ +||++|++++... .+++.++||+||+|..+..+|.. .. .......+
T Consensus 150 ~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~~~~~-~~~~~~~inlDm~G~~~~~~~~~--g~-~~~~~~~l 225 (314)
T 3gux_A 150 ALGIDIVFFDSEDYGIPEFYDGKYKQDTWCLGSQYWARTPHVQ-NYNARYGILLDMVGGKDATFYYE--GY-SARTARSE 225 (314)
T ss_dssp SSEEEEEEECSCCC-----------CTTSCHHHHHHHHSCSST-TCCCSEEEEEESCCBTTCCEEEC--TT-HHHHCHHH
T ss_pred CCcEEEEEECCccccccccccccccccccchhHHHHHhCCccc-ccceeEEEEEeccCCCCCceeee--cc-ccccHHHH
Confidence 8999999999999999 9999999986543 68899999999999974444432 11 11112355
Q ss_pred HHHHHHHHHHhCceeccccccccCCCCCCCcchhhhhc-CCCeEEEEeecCC---CCCccccCCCCCCCcCCCCHHHHHH
Q 014338 336 FEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQFSR-LRVTAATLSELSA---APELLESTGGLLDSRHFVDETSFIR 411 (426)
Q Consensus 336 ~~~l~~~a~~~~~~~~~~~~ki~~~~~~~~~dHe~F~~-~gIPa~tls~~~~---~~~~~~~~~s~~Dt~d~ld~~~L~~ 411 (426)
++.+++.++.++......... .....+||.+|.+ +|||++.+..... ...+...|||..||+++||++.|.+
T Consensus 226 ~~~~~~~~~~~g~~~~f~~~~----~~~~~sDh~pF~~~~GiP~l~~i~~~~~~~~~~f~~~~Ht~~Dt~d~id~~~l~~ 301 (314)
T 3gux_A 226 MKKIWKKAHELGYGKYFVKED----GGETVDDHIYVNKLARIPCVDIINYDAGNPQSSFGSFWHTVNDTMENIDRNTLKA 301 (314)
T ss_dssp HHHHHHHHHHHTCTTTEEEEE----CCCCCCHHHHHHHHSCCCEEEEEBCC--------------------CBCHHHHHH
T ss_pred HHHHHHHHHHcCCcccccccc----CCCCCCccHHHHhcCCCceEEEecccccccccCCCCCCCCCcCcchhCCHHHHHH
Confidence 666666666665432111111 1234689999999 8999999976521 0112124689999999999999999
Q ss_pred HHHHHHHHHH
Q 014338 412 SVKLVAESLA 421 (426)
Q Consensus 412 ~~~~iae~la 421 (426)
.++++...|-
T Consensus 302 ~~~~~~~~~y 311 (314)
T 3gux_A 302 VGQTVMDVIY 311 (314)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999988763
No 8
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.95 E-value=7.1e-27 Score=233.36 Aligned_cols=209 Identities=16% Similarity=0.179 Sum_probs=148.6
Q ss_pred CcceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCC---CCCCCCCCCchhHHHHHHHHHHHHHhccCC----CCCCCcc
Q 014338 199 TITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAA---PALSVGSDSNGSGVVALLEVARLFSLLYSN----PKTRGRY 271 (426)
Q Consensus 199 ~~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~---p~~~~GAddn~SG~a~LLElar~~~~l~~~----~~~~p~~ 271 (426)
...||+|+++|.. ++.|+++|||||++.. ..+.+||+||+||+|++||+||.|.+.... .+.+|++
T Consensus 87 ~~~Nvi~~~~g~~-------~~~i~l~aH~Dsv~~~~~~~~~~~Ga~D~~sGva~~le~ar~l~~~~~~~~~~~g~~~~~ 159 (329)
T 2afw_A 87 SFSNIISTLNPTA-------KRHLVLACHYDSKYFSHWNNRVFVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDL 159 (329)
T ss_dssp EEEEEEEESSTTS-------SEEEEEEEECCCCCCCCBTTBCCCCTTTTHHHHHHHHHHHHHTHHHHHTTC------CCE
T ss_pred eEeEEEEEECCCC-------CcEEEEEEeccCCCcCcccCcCCCCcccchhhHHHHHHHHHHHHHHHhhhcccccCCCCc
Confidence 4799999998852 6899999999998753 224689999999999999999999886311 1246899
Q ss_pred eEEEEEeCCCCC--------CCcchHHHHHhccHh----------hhcCeeEEEEeccccCCCCceeEEecCCCcchHHH
Q 014338 272 NILFGLTSGGPY--------NYNGTHKWLRSFDQR----------LRESIDYAICLNSVGSWNNELWIHVSKPPENAYIK 333 (426)
Q Consensus 272 ~I~F~~~~gEe~--------g~~GS~~~v~~~~~~----------~~~~i~~vinlD~iG~~~~~l~~hvs~~p~~~~~~ 333 (426)
+|.|++|++||. |+.||++|++++... .+++|.++||+||+|.. +..++... +.. .
T Consensus 160 ~i~~~~~~~EE~~~~~~~~~gl~Gs~~~~~~~~~~~~p~~~~~~~~~~~i~~~inlD~iG~~-~~~~~~~~--~~~---~ 233 (329)
T 2afw_A 160 SLQLIFFDGEEAFLHWSPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAP-NPTFPNFF--PNS---A 233 (329)
T ss_dssp EEEEEEESCCSCSSSCCSSSSCHHHHHHHHHHHTSBSSTTCSSCBTTTTEEEEEEECSCCSS-SCCBCCCC--GGG---H
T ss_pred cEEEEEecCcccccccCCCccchhHHHHHHHHHhCCCcccccccccccceEEEEEeccCCCC-CCceeeec--cCc---c
Confidence 999999999998 999999999975421 36789999999999986 33222111 111 1
Q ss_pred HHHHHHHHHHH---HhCceeccccccccCCC----CCCCcchhhhhcCCCeEEEEeecCCCCCccccCCCCCCCcCCCCH
Q 014338 334 QIFEGFTNVAE---ELGFKVGLKHKKINISN----PRVAWEHEQFSRLRVTAATLSELSAAPELLESTGGLLDSRHFVDE 406 (426)
Q Consensus 334 ~~~~~l~~~a~---~~~~~~~~~~~ki~~~~----~~~~~dHe~F~~~gIPa~tls~~~~~~~~~~~~~s~~Dt~d~ld~ 406 (426)
.+++.+..+++ ..++.........-+.+ ....+||.+|.++|||++.++....+ + .|||..||.++||+
T Consensus 234 ~~~~~l~~~~~~~~~~g~~~~~~~~~~~f~~~~~~g~~~sDh~~F~~~GiP~~~~~~~~~~--~--~yHt~~Dt~~~ld~ 309 (329)
T 2afw_A 234 RWFERLQAIEHELHELGLLKDHSLEGRYFQNYSYGGVIQDDHIPFLRRGVPVLHLIPSPFP--E--VWHTMDDNEENLDE 309 (329)
T ss_dssp HHHHHHHHHHHHHHHTTCSSSCCSTTCSBCSCCCCSCCCSTTHHHHTTTCCEEEECCSSCC--T--TTTSTTCSSTTCCH
T ss_pred hHHHHHHHHHHHHHHcCCccCCCcccccccccccCCCCCCCCHhHHHCCCCEEEEEcCCCC--C--CCCCCCCchhhCCH
Confidence 23333322222 22321100000000111 11358999999999999999876432 2 56899999999999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 014338 407 TSFIRSVKLVAESLAVSL 424 (426)
Q Consensus 407 ~~L~~~~~~iae~la~~~ 424 (426)
+.|.+.+++++..++.+|
T Consensus 310 ~~l~~~~~~~~~~v~eyl 327 (329)
T 2afw_A 310 STIDNLNKILQVFVLEYL 327 (329)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999999886
No 9
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=99.95 E-value=8.6e-26 Score=232.47 Aligned_cols=285 Identities=17% Similarity=0.132 Sum_probs=196.0
Q ss_pred cccceEEEEecCCCCHH-HHHHHHhccCCceEEEEecCccccccCCCCCCCchhhHHHHHHHHHHHHHhh-ccCCCCcEE
Q 014338 74 DLSRTVVMIPVRELNIS-FVTEYVSRKHPLGGMLFLLPEIFRLENGGGGKDVREKEVVKNVLLELEKLLV-HAKLPYPVY 151 (426)
Q Consensus 74 ~~~R~~vv~~~~~~~~~-~~~~~~~~~~~~~gvli~lp~~~~~~s~~~~n~~~~~~~~~~~~~~le~~Ll-~~~~~~Pvy 151 (426)
++.-+.||++..+..+. .+... ++.++.||||+...... +.. . +. .....+|+.
T Consensus 112 dv~GkIvlv~~g~~~~~~k~~~A--~~~GA~gvIi~~~~~~~-~~g--------------~-------~~~~~~~~IP~~ 167 (421)
T 2ek8_A 112 DLNGKIALIQRGNISFADKVRNA--AKQGAKAVIIYNNTDGK-LNG--------------T-------LGGSDASFVAAV 167 (421)
T ss_dssp CCTTSEEEEECCSSCHHHHHHHH--HHTTCSEEEEECSSSSC-CCC--------------B-------CSSCCTTCCEEE
T ss_pred CcCceEEEEeCCCCCHHHHHHHH--HHCCCeEEEEEeCCCcc-ccc--------------c-------cCCCCCCCccEE
Confidence 56678899987776532 33332 44689999998543211 000 0 11 134679999
Q ss_pred EeeChhHHHHHHHHhccCCCCCCCCccccCCeEEEeccCCCcccCCCCcceEEEEEcCcCCCCCCCCCCEEEEEecCCCC
Q 014338 152 FAFENDEIDAVLDDVKKNDATGQPATATTGGYKLVIPIAEPKKVASPTITNIQGWLQGLKADGDANQLPTIAIVASYDTF 231 (426)
Q Consensus 152 f~~~~~~~~~i~~~~~~~~~~~~~~t~~~~~~~~~~s~~~~~~~~~~~~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~ 231 (426)
.+.. ++.+.|++.++... .+ + .+..+.+. . .......||+|+++|++.. ..++++|+++|||||+
T Consensus 168 ~Is~-~~a~~L~~~l~~~~-~g-~-----~~v~l~~~----~-~~~~~~~Nvi~~~~g~~~~--~~~~~~v~~~aH~D~v 232 (421)
T 2ek8_A 168 GITK-QEGDALAANLRAGE-KI-T-----ATVKVAGA----E-VKTLTSHNVIATKKPDANK--KNTNDIIIIGSHHDSV 232 (421)
T ss_dssp EECH-HHHHHHHHHHHTTC-CC-E-----EEEEEESC----E-EEEEEEEEEEEEECCCSST--TCCCCEEEEEEECCCC
T ss_pred EeCH-HHHHHHHHHhhhhc-cC-C-----cccccccc----c-cccccccceEEEecCcccC--CCCCCEEEEecccccC
Confidence 9886 47888888874211 00 0 11222221 1 3344589999999996420 0147899999999999
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCcceEEEEEeCCCCCCCcchHHHHHhccHhhhcCeeEEEEecc
Q 014338 232 GAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNS 311 (426)
Q Consensus 232 g~~p~~~~GAddn~SG~a~LLElar~~~~l~~~~~~~p~~~I~F~~~~gEe~g~~GS~~~v~~~~~~~~~~i~~vinlD~ 311 (426)
+. .+||.||+||++++||++|.|.+. +++++|+|++|++||.|+.||++|++++.....+++.++||+||
T Consensus 233 ~~----g~Ga~D~~~G~a~~le~~~~l~~~------~~~~~i~~~~~~~EE~g~~Gs~~~~~~~~~~~~~~~~~~in~D~ 302 (421)
T 2ek8_A 233 EK----APGANDDASGVAVTLELARVMSKL------KTDTELRFITFGAEENGLIGSKKYAASLSEDEIKRTIGMFQLDM 302 (421)
T ss_dssp TT----CCCTTTTHHHHHHHHHHHHHHTTS------CCSSEEEEEEESSSTTTSHHHHHHHTTCCHHHHHHEEEEEEECS
T ss_pred CC----CCCCCCCcHhHHHHHHHHHHHhcc------CCCceEEEEEECCccccchhHHHHHHhCccchhhcEEEEEEecc
Confidence 86 689999999999999999999874 35799999999999999999999999876555788999999999
Q ss_pred ccCCCC-ceeEEecCCCcchHHHHHHHHHHHHHHHhCceeccccccccCCCCCCCcchhhhhcCCCeEEEEeecCCCCCc
Q 014338 312 VGSWNN-ELWIHVSKPPENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSAAPEL 390 (426)
Q Consensus 312 iG~~~~-~l~~hvs~~p~~~~~~~~~~~l~~~a~~~~~~~~~~~~ki~~~~~~~~~dHe~F~~~gIPa~tls~~~~~~~~ 390 (426)
+|..+. .++++....... ....+ ....++..++. .. .. ....+||.+|.+.|||++.++..+. ++
T Consensus 303 ~g~~~~~~~~~~~~~g~~~-~~~~~---~~~~~~~~~~~-~~----~~---~~~~SD~~~F~~~GIP~~~~~~~~~--~~ 368 (421)
T 2ek8_A 303 VGSKDAGDLIMYTIDGKKN-RVTDL---GAAASSRLSGV-LP----YG---QEGRSDHESFHALGIPAALFIHAPV--EP 368 (421)
T ss_dssp CCBTTSCEEEEEETTSCCC-HHHHH---HHHHHHHHTSC-CC----EE---ECCSSTHHHHHTTTCCEEEEEEESC--CT
T ss_pred cCCCCCcceEEecCCCccc-cchhh---HHHHHHhcCCC-CC----CC---CCCCCccHHHHHCCCCEEEEECCcC--CC
Confidence 998632 344443322111 11121 22334444543 11 11 1236899999999999998875432 12
Q ss_pred cccCCCCCCCcCCCCHHHHHHHHHHHHHHHHHH
Q 014338 391 LESTGGLLDSRHFVDETSFIRSVKLVAESLAVS 423 (426)
Q Consensus 391 ~~~~~s~~Dt~d~ld~~~L~~~~~~iae~la~~ 423 (426)
.|||..||++++|.+.+.+.+++++..+.+.
T Consensus 369 --~yHt~~Dt~~~i~~~~l~~~~~~~~~~~~~l 399 (421)
T 2ek8_A 369 --WYHTPNDTLDKISKEKLDNVADIVGSAVYQA 399 (421)
T ss_dssp --TTTSTTCCGGGBCHHHHHHHHHHHHHHHHHH
T ss_pred --CCCCcccchhhCCHHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999998887653
No 10
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.93 E-value=3.4e-25 Score=216.62 Aligned_cols=198 Identities=17% Similarity=0.160 Sum_probs=152.1
Q ss_pred CcceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCcceEEEEEe
Q 014338 199 TITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLT 278 (426)
Q Consensus 199 ~~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p~~~~GAddn~SG~a~LLElar~~~~l~~~~~~~p~~~I~F~~~ 278 (426)
...||+|+++|.+ +.++|+++||||+++. .+||.||++|++++||++|.|.+.. .+++++|.|+++
T Consensus 63 ~~~nvi~~~~g~~------~~~~i~l~aH~D~v~~----g~Ga~D~~~g~a~~l~~~~~l~~~~----~~~~~~i~~~~~ 128 (284)
T 1tkj_A 63 TGYNLIANWPGGD------PNKVLMAGAHLDSVSS----GAGINDNGSGSAAVLETALAVSRAG----YQPDKHLRFAWW 128 (284)
T ss_dssp EEEEEEEECSCSE------EEEEEEEEEECCCCTT----SCCTTTTHHHHHHHHHHHHHHHHTT----CCCSEEEEEEEE
T ss_pred CceeEEEEEeCCC------CCCEEEEEeecCCCCC----CCCCccChHHHHHHHHHHHHHHhcC----CCCCceEEEEEE
Confidence 3579999999853 2589999999999986 6799999999999999999998753 467899999999
Q ss_pred CCCCCCCcchHHHHHhccHhhhcCeeEEEEeccccCCCCceeEEecCCCcchHHHHHHHHHHHHHHHhCceecccccccc
Q 014338 279 SGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWNNELWIHVSKPPENAYIKQIFEGFTNVAEELGFKVGLKHKKIN 358 (426)
Q Consensus 279 ~gEe~g~~GS~~~v~~~~~~~~~~i~~vinlD~iG~~~~~l~~hvs~~p~~~~~~~~~~~l~~~a~~~~~~~~~~~~ki~ 358 (426)
++||.|+.||++|++++....++++.++||+|++|..+..+++. .. ++ .+.+.+...+++.++..... .
T Consensus 129 ~~EE~g~~Gs~~~~~~~~~~~~~~~~~~i~~D~~g~~~~~~~~~-~~---~~---~l~~~~~~~~~~~gi~~~~~----~ 197 (284)
T 1tkj_A 129 GAEELGLIGSKFYVNNLPSADRSKLAGYLNFDMIGSPNPGYFVY-DD---DP---VIEKTFKNYFAGLNVPTEIE----T 197 (284)
T ss_dssp SCGGGTSHHHHHHHHHSCHHHHTTEEEEEEECCCCCSSCCCEEC-CS---SH---HHHHHHHHHHHHHTCCCEEC----C
T ss_pred CCcccCCcCHHHHHhhCccchhhcEEEEEEecCCCCCCCCeEEe-cC---CH---HHHHHHHHHHHHcCCCcccC----C
Confidence 99999999999999987655568899999999999863233332 21 12 23344445566666654421 1
Q ss_pred CCCCCCCcchhhhhcCCCeEEEEeecCCC---------------CCccccCCCCCCCcCCCCHHHHHHHHHHHHHHHHHH
Q 014338 359 ISNPRVAWEHEQFSRLRVTAATLSELSAA---------------PELLESTGGLLDSRHFVDETSFIRSVKLVAESLAVS 423 (426)
Q Consensus 359 ~~~~~~~~dHe~F~~~gIPa~tls~~~~~---------------~~~~~~~~s~~Dt~d~ld~~~L~~~~~~iae~la~~ 423 (426)
.....+||.+|.+.|||++.++..... ..+.+.|||..||++++|.+.|.+.++++++.+.+.
T Consensus 198 --~~~~~sD~~~f~~~Gip~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~yHt~~D~~~~id~~~l~~~~~~~~~~~~~l 275 (284)
T 1tkj_A 198 --EGDGRSDHAPFKNVGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCDSLSNINDTALDRNSDAAAHAIWTL 275 (284)
T ss_dssp --SSTTCSTHHHHHHTTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTTSTTCSTTSCCHHHHHHHHHHHHHHHHHH
T ss_pred --CCCCCCchHHHHHCCCCEEEeecCcccccccchhhccccccccCCCCCCCCCcCChhhCCHHHHHHHHHHHHHHHHHH
Confidence 112358999999999999999764210 112235789999999999999999999999888653
No 11
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=99.93 E-value=1.5e-25 Score=241.20 Aligned_cols=234 Identities=16% Similarity=0.214 Sum_probs=158.0
Q ss_pred CCCcEEEeeChhHHHHHHHHhccCCCC---CCCC-cc-ccCC--eEEEeccCCCcccCCCCcceEEEEEcCcCCCCCCCC
Q 014338 146 LPYPVYFAFENDEIDAVLDDVKKNDAT---GQPA-TA-TTGG--YKLVIPIAEPKKVASPTITNIQGWLQGLKADGDANQ 218 (426)
Q Consensus 146 ~~~Pvyf~~~~~~~~~i~~~~~~~~~~---~~~~-t~-~~~~--~~~~~s~~~~~~~~~~~~~NV~g~l~G~~~~~~~~~ 218 (426)
..||+..+.. ++++.|++.++..... +... +. ...+ .++.+ ........+.||+|+|+|+.. +
T Consensus 210 p~IP~~~Is~-~~a~~Ll~~l~g~~~~~~~~~~~~~~~~g~~~~v~l~v----~~~~~~~~~~NVi~~i~G~~~-----~ 279 (640)
T 3kas_A 210 PNIPVQTISR-AAAEKLFGNMEGDCPSDWKTDSTCRMVTSESKNVKLTV----SNVLKEIKILNIFGVIKGFVE-----P 279 (640)
T ss_dssp CSSCEEECCH-HHHHHHHTTEEEECCGGGCCCTTCEEEECTTEEEEEEE----CCEEEEEEEEEEEEEECCSSE-----E
T ss_pred CCCCEEecCH-HHHHHHHHHccCCchhhhhcccCcccccCCCceEEEEE----EEEEEeeeEEEEEEEEeCCcC-----C
Confidence 4599999987 5999999887652100 1110 00 0111 22222 122344578999999999741 4
Q ss_pred CCEEEEEecCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCcceEEEEEeCCCCCCCcchHHHHHhccHh
Q 014338 219 LPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQR 298 (426)
Q Consensus 219 ~~~Ivi~AHyDs~g~~p~~~~GAddn~SG~a~LLElar~~~~l~~~~~~~p~~~I~F~~~~gEe~g~~GS~~~v~~~~~~ 298 (426)
+++|||+|||||| .+||+||+||+++|||+||.|+++....+++|+|+|+|++|+|||.|++||++|++++...
T Consensus 280 ~~~vvvgaH~Ds~------~~Ga~D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I~f~~~~~EE~gl~GS~~~~~~~~~~ 353 (640)
T 3kas_A 280 DHYVVVGAQRDAW------GPGAAKSGVGTALLLKLAQMFSDMVLKDGFQPSRSIIFASWSAGDFGSVGATEWLEGYLSS 353 (640)
T ss_dssp EEEEEEEEECCCS------SCCTTTTHHHHHHHHHHHHHHHHHHHTSCCCCSEEEEEEEESSGGGTSHHHHHHHHHTTTT
T ss_pred CCceeeecccCCC------CCCCCcCcHHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEECCcccCchhHHHHHHhhhhh
Confidence 7899999999999 5899999999999999999999873124578999999999999999999999999987654
Q ss_pred hhcCeeEEEEeccccCCCCceeEEecCCCcchHHHHHHHHHHHHHHHhCceec--cccc---ccc-CCCCCCCcchhhhh
Q 014338 299 LRESIDYAICLNSVGSWNNELWIHVSKPPENAYIKQIFEGFTNVAEELGFKVG--LKHK---KIN-ISNPRVAWEHEQFS 372 (426)
Q Consensus 299 ~~~~i~~vinlD~iG~~~~~l~~hvs~~p~~~~~~~~~~~l~~~a~~~~~~~~--~~~~---ki~-~~~~~~~~dHe~F~ 372 (426)
+.+++.++||+||.|.++..+.+ ...|. +..+++ ++++.....+. .... ..+ +..-...+||.+|.
T Consensus 354 l~~~~~a~iNlD~~~~G~~~l~~--~~~p~---l~~l~~---~~~~~v~~P~~~~tl~~~~~w~~~~~~~~~~sD~~~F~ 425 (640)
T 3kas_A 354 LHLKAFTYINLDKAVLGTSNFKV--SASPL---LYTLIE---KTMQNVKHPVTGQFLYQDSNWASKVEKLTLDNAAFPFL 425 (640)
T ss_dssp GGGTEEEEEECTTCBSCSSEEEE--EECGG---GHHHHH---HHHTTCBCTTTCSBSCCCTTGGGGCCCCCTTSTHHHHH
T ss_pred hhhCEEEEEecccCccCCCceEE--EeCHH---HHHHHH---HHHHhCCCCCCCCceecccccccccCCCCCCcchHHHH
Confidence 56899999999999876334443 33332 334443 33332211111 0000 000 11112357999997
Q ss_pred c-CCCeEEEEeecCCCCCccccCCCCCCCcCCCC
Q 014338 373 R-LRVTAATLSELSAAPELLESTGGLLDSRHFVD 405 (426)
Q Consensus 373 ~-~gIPa~tls~~~~~~~~~~~~~s~~Dt~d~ld 405 (426)
. .|||++.+..... +.| ..|||.+||.++++
T Consensus 426 ~~~GIP~~~~~~~~~-~~y-~~yHT~~Dt~~~i~ 457 (640)
T 3kas_A 426 AYSGIPAVSFCFCED-TDY-PYLGTTMDTYKELI 457 (640)
T ss_dssp HHHCCCEEEEEEECS-SCC-TTTTSTTCCHHHHH
T ss_pred HhCCCCeeeccccCC-CCC-CCcCCccccHHHHH
Confidence 7 8999999875432 223 24689999998765
No 12
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=99.92 E-value=1.2e-24 Score=236.36 Aligned_cols=253 Identities=17% Similarity=0.168 Sum_probs=164.3
Q ss_pred CCCcEEEeeChhHHHHHHHHhccCCCC-----CCCC-c-cccCCe-------EEEeccCCCcccCCCCcceEEEEEcCcC
Q 014338 146 LPYPVYFAFENDEIDAVLDDVKKNDAT-----GQPA-T-ATTGGY-------KLVIPIAEPKKVASPTITNIQGWLQGLK 211 (426)
Q Consensus 146 ~~~Pvyf~~~~~~~~~i~~~~~~~~~~-----~~~~-t-~~~~~~-------~~~~s~~~~~~~~~~~~~NV~g~l~G~~ 211 (426)
..||+..+.+ ++++.|++.+++...+ +... + ....+| ++.... ........+.||+|+|+|+.
T Consensus 247 p~IP~~pIS~-~da~~Ll~~l~g~~~p~~~W~g~~~~~y~~gp~~~g~~~~~~v~l~v--~~~~~~~~~~NVi~~i~G~~ 323 (707)
T 3fed_A 247 PRIPVHPIGY-NDAEILLRYLGGIAPPDKSWKGALNVSYSIGPGFTGSDSFRKVRMHV--YNINKITRIYNVVGTIRGSV 323 (707)
T ss_dssp CSSCEEEECH-HHHHHHHHTBCBSCCSSGGGCCSSSSCCCCBSSBCCC-CCCEEEEEB--CCEEEEEEEEEEEEEECCSS
T ss_pred CCCCeEecCH-HHHHHHHHHhcCCCCcccccccCcCcceecccccCCCCCceeEEEEE--EEEEEEEEEEEEEEEEeCCC
Confidence 5699999998 5999999998754211 1110 0 001111 222211 12233456899999999975
Q ss_pred CCCCCCCCCEEEEEecCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCcceEEEEEeCCCCCCCcchHHH
Q 014338 212 ADGDANQLPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKW 291 (426)
Q Consensus 212 ~~~~~~~~~~Ivi~AHyDs~g~~p~~~~GAddn~SG~a~LLElar~~~~l~~~~~~~p~~~I~F~~~~gEe~g~~GS~~~ 291 (426)
. ++++|||+|||||| .+||.||+||++++||+||.|+++.. .+++|+++|+|++|+|||.|+.||++|
T Consensus 324 ~-----~~~~vllgaH~Ds~------~~Ga~D~~sG~a~lLe~ar~l~~~~~-~g~~p~r~I~f~~~~~EE~Gl~GS~~~ 391 (707)
T 3fed_A 324 E-----PDRYVILGGHRDSW------VFGAIDPTSGVAVLQEIARSFGKLMS-KGWRPRRTIIFASWDAEEFGLLGSTEW 391 (707)
T ss_dssp E-----EEEEEEEEEECCCS------SSCTTTTHHHHHHHHHHHHHHHHHHH-TTCCCSEEEEEEEESCGGGTSHHHHHH
T ss_pred C-----CCceEEEeccccCC------CCCCccCcHHHHHHHHHHHHHHhhhh-ccCCCCCCEEEEEeCCccccchhHHHH
Confidence 2 47899999999999 47999999999999999999999754 368899999999999999999999999
Q ss_pred HHhccHhhhcCeeEEEEeccccCCCCceeEEecCCCcchHHHHHHHHHHHHHHHhCce--------ec-ccccc------
Q 014338 292 LRSFDQRLRESIDYAICLNSVGSWNNELWIHVSKPPENAYIKQIFEGFTNVAEELGFK--------VG-LKHKK------ 356 (426)
Q Consensus 292 v~~~~~~~~~~i~~vinlD~iG~~~~~l~~hvs~~p~~~~~~~~~~~l~~~a~~~~~~--------~~-~~~~k------ 356 (426)
++++...+.+++.++||+||.|.++..+.+.. .|. ...++. .+++...-. +- ...++
T Consensus 392 ~~~~~~~~~~~~~a~iNlD~~~~g~~~~~~~~--sp~---l~~~i~---~~~~~v~~P~~~~~~~tly~~w~~~~~~~~~ 463 (707)
T 3fed_A 392 AEENVKILQERSIAYINSDSSIEGNYTLRVDC--TPL---LYQLVY---KLTKEIPSPDDGFESKSLYESWLEKDPSPEN 463 (707)
T ss_dssp HHHHHHHHHHHEEEEEECSCSBSCSSEEEEEE--CGG---GHHHHH---HHHTTSBCCSTTCTTSBHHHHHHHHSEETTE
T ss_pred HHhcchhhhhCEEEEEEecccccCCceEEEec--CHH---HHHHHH---HHHhcCCCCccccccccHHHHHHhhcccccc
Confidence 99876655789999999999998632444432 232 222322 222211000 00 00000
Q ss_pred --c-cCCCCCCCcchhhhhc-CCCeEEEEeecCCC-----CCccccCCCCCCCcCCCC------HHHHHHHHHHHHHHHH
Q 014338 357 --I-NISNPRVAWEHEQFSR-LRVTAATLSELSAA-----PELLESTGGLLDSRHFVD------ETSFIRSVKLVAESLA 421 (426)
Q Consensus 357 --i-~~~~~~~~~dHe~F~~-~gIPa~tls~~~~~-----~~~~~~~~s~~Dt~d~ld------~~~L~~~~~~iae~la 421 (426)
+ .+......+||.+|.. .|||++.+...... ..| .+|||.+||.+.++ +......+++++..+.
T Consensus 464 ~~~p~i~~lgsgSD~~~F~~~~GIPs~~~~f~~~~~~~~~~~y-~~YHT~~Dt~~~~~~~~Dp~f~~h~~~a~~~g~l~l 542 (707)
T 3fed_A 464 KNLPRINKLGSGSDFEAYFQRLGIASGRARYTKNKKTDKYSSY-PVYHTIYETFELVEKFYDPTFKKQLSVAQLRGALVY 542 (707)
T ss_dssp EEEECEECCCSSSTTHHHHHTTCCCEEEEEEECCTTTCCSSSC-TTTTSTTCCHHHHHHHTCTTCHHHHHHHHHHHHHHH
T ss_pred cCCcccccCCCCCChHHHHHhCCcceeccccccCccccccCCC-CCcCCCcccHHHHHHhcCchHHHHHHHHHHHHHHHH
Confidence 0 0111123579999998 79999988764220 122 35799999986542 2333344455554444
Q ss_pred H
Q 014338 422 V 422 (426)
Q Consensus 422 ~ 422 (426)
+
T Consensus 543 ~ 543 (707)
T 3fed_A 543 E 543 (707)
T ss_dssp H
T ss_pred H
Confidence 3
No 13
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.92 E-value=6.6e-24 Score=208.77 Aligned_cols=202 Identities=14% Similarity=0.124 Sum_probs=148.0
Q ss_pred CcceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCC----CCCCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCcceEE
Q 014338 199 TITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAA----PALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNIL 274 (426)
Q Consensus 199 ~~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~----p~~~~GAddn~SG~a~LLElar~~~~l~~~~~~~p~~~I~ 274 (426)
...||+|+++|.+. +.++|+++||||+++.. ..+.+||.||++|++++||++|.|.+.. .+|+++|.
T Consensus 74 ~~~nvi~~~~g~~~-----~~~~v~l~aH~D~v~~~~~~~~~~~~Ga~D~~~g~a~~l~~~~~l~~~~----~~~~~~i~ 144 (299)
T 1rtq_A 74 NQKSVVMTITGSEA-----PDEWIVIGGHLDSTIGSHTNEQSVAPGADDDASGIAAVTEVIRVLSENN----FQPKRSIA 144 (299)
T ss_dssp EEEEEEEEECCSSE-----EEEEEEEEEECCCCSSTTCCTTCCCCCTTTTHHHHHHHHHHHHHHHHTT----CCCSEEEE
T ss_pred CCceEEEEEECCCC-----CCCEEEEEeccccCCCcCcCCCcccCCCcccHHHHHHHHHHHHHHHHcC----CCCCceEE
Confidence 45899999998641 35899999999998621 1357999999999999999999998753 46789999
Q ss_pred EEEeCCCCCCCcchHHHHHhccHhhhcCeeEEEEeccccCCC--CceeEEecCCCcchHHHHHHHHHHHHHHHh--Ccee
Q 014338 275 FGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWN--NELWIHVSKPPENAYIKQIFEGFTNVAEEL--GFKV 350 (426)
Q Consensus 275 F~~~~gEe~g~~GS~~~v~~~~~~~~~~i~~vinlD~iG~~~--~~l~~hvs~~p~~~~~~~~~~~l~~~a~~~--~~~~ 350 (426)
|+++++||.|+.||++|++++... .+++.++||+||+|..+ ..+++... +.+..+. +.+.++++.+ ++..
T Consensus 145 ~~~~~~EE~g~~Gs~~~~~~~~~~-~~~~~~~i~~D~~g~~g~~~~i~~~~~--~~~~~l~---~~l~~~a~~~~~~i~~ 218 (299)
T 1rtq_A 145 FMAYAAEEVGLRGSQDLANQYKSE-GKNVVSALQLDMTNYKGSAQDVVFITD--YTDSNFT---QYLTQLMDEYLPSLTY 218 (299)
T ss_dssp EEEESCGGGTSHHHHHHHHHHHHT-TCEEEEEEECSCCSCCCSSSSEEEECT--TSCHHHH---HHHHHHHHHHCTTCCE
T ss_pred EEEECCccCCchhHHHHHHhhhhc-cccEEEEEEecCCCCCCCCcceEEEeC--CCCchHH---HHHHHHHHHhCccCCc
Confidence 999999999999999999987653 57899999999998642 23444322 2222233 3344445555 3333
Q ss_pred ccccccccCCCCCCCcchhhhhcCCCeEEEEeecCCCCCccccCCCCCCCcCCCCH--HHHHHHHHHHHHHHHH
Q 014338 351 GLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSAAPELLESTGGLLDSRHFVDE--TSFIRSVKLVAESLAV 422 (426)
Q Consensus 351 ~~~~~ki~~~~~~~~~dHe~F~~~gIPa~tls~~~~~~~~~~~~~s~~Dt~d~ld~--~~L~~~~~~iae~la~ 422 (426)
+.. . .....+||.+|.++|||++.++.... .++.+.|||..||++++|+ ..+.+.++++++.+.+
T Consensus 219 ~~~-----~-~~~~~sD~~~f~~~GiP~~~~~~~~~-~~~~~~yHt~~Dt~~~~d~~~~~~~~~~~l~~~~~~~ 285 (299)
T 1rtq_A 219 GFD-----T-CGYACSDHASWHNAGYPAAMPFESKF-NDYNPRIHTTQDTLANSDPTGSHAKKFTQLGLAYAIE 285 (299)
T ss_dssp EEE-----C-CSSCCSTHHHHHHTTCCEECEESSCG-GGSCTTTTSTTCCGGGSCTTCHHHHHHHHHHHHHHHH
T ss_pred ccC-----C-CCCCCCcHHHHHHCCCCEEEeccccc-ccCCCCCCCccccccccCccHHHHHHHHHHHHHHHHH
Confidence 311 0 11235899999999999998765321 1222357899999999998 5788888888877765
No 14
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=99.86 E-value=1.3e-20 Score=190.85 Aligned_cols=183 Identities=17% Similarity=0.142 Sum_probs=133.1
Q ss_pred cceEEEE--EcCcCCCCCCCCCCEEEEEecCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCcceEEEEE
Q 014338 200 ITNIQGW--LQGLKADGDANQLPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGL 277 (426)
Q Consensus 200 ~~NV~g~--l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p~~~~GAddn~SG~a~LLElar~~~~l~~~~~~~p~~~I~F~~ 277 (426)
....+|. ++|.. .+.|+|+|||||-+ +|+||+||+|+++||||.|++. +|++++.|+|
T Consensus 165 G~l~y~e~~ipG~t-------~~~IllsaH~cHP~-------~ANDNaSG~a~lleLar~l~~~------~~~~t~rFvf 224 (435)
T 3k9t_A 165 GSLTYGEYYIRGEL-------EEEILLTTYTCHPS-------MCNDNLSGVALITFIAKALSKL------KTKYSYRFLF 224 (435)
T ss_dssp CEEEEEEEEECCSS-------SCEEEEEEECCCCS-------CTTTTHHHHHHHHHHHHHHTTS------CCSSEEEEEE
T ss_pred CceEEEEEEecCCC-------CCEEEEEEEcCCCC-------CCCccchHHHHHHHHHHHHhcC------CCCceEEEEE
Confidence 3444444 58843 68999999999853 6999999999999999999863 3689999999
Q ss_pred eCCCCCCCcchHHHHHhccHhhhcCeeEEEEeccccCCCCceeEEecCCCc-chHHHHHHHHHHHHHHHhCceecccccc
Q 014338 278 TSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWNNELWIHVSKPPE-NAYIKQIFEGFTNVAEELGFKVGLKHKK 356 (426)
Q Consensus 278 ~~gEe~g~~GS~~~v~~~~~~~~~~i~~vinlD~iG~~~~~l~~hvs~~p~-~~~~~~~~~~l~~~a~~~~~~~~~~~~k 356 (426)
+. |++||..|+.++... +++|.++||+||+|.. +. +.+. .++. ++....+. ..++++.+.....
T Consensus 225 ~p----g~iGS~~yl~~~~~~-l~~i~a~lnLDmVGd~-~~-~~y~-~sr~g~~~~d~~~---~~vl~~~~~~~~~---- 289 (435)
T 3k9t_A 225 AP----ETIGSITWLSRNEDK-LKNIKMGLVATCVGDA-GI-KNYK-RTKFGDAEIDKIV---EKVLMHCGSEYYV---- 289 (435)
T ss_dssp EC----TTHHHHHHHHHCGGG-GGGEEEEEECCSCCSS-SC-EEEE-CCTTSSSHHHHHH---HHHHHHSSSCEEE----
T ss_pred cC----ccHHHHHHHHhChHh-hhceEEEEEEEEecCC-CC-ceee-cCCCCChHHHHHH---HHHHhhcCCCCce----
Confidence 99 899999999987543 6799999999999986 33 2232 2222 22222222 2233433322222
Q ss_pred ccCCCCCCCcchhhhhcCC--CeEEEEeecCCCCCccccCCCCCCCcCCCCHHHHHHHHHHHHHHHHH
Q 014338 357 INISNPRVAWEHEQFSRLR--VTAATLSELSAAPELLESTGGLLDSRHFVDETSFIRSVKLVAESLAV 422 (426)
Q Consensus 357 i~~~~~~~~~dHe~F~~~g--IPa~tls~~~~~~~~~~~~~s~~Dt~d~ld~~~L~~~~~~iae~la~ 422 (426)
..+.+ ..+||.+|...| ||++++...+.. .+ .|||..||+++|+.+.|...+.++.+++..
T Consensus 290 ~~f~~--~GSDh~qF~spG~dIPv~~~~r~~~~-~p--eYHTs~Dtld~ISpe~L~~s~~iv~~~i~~ 352 (435)
T 3k9t_A 290 ADFFP--WGSDERQFSSPGINLSVGSLMRSCYG-FD--GYHTSADNLCYMNKDGLADSYKTYLEVIYT 352 (435)
T ss_dssp ECCCS--CSSTHHHHTSTTTCCCEEEEESSCTT-CT--TTTBTTSSGGGCCHHHHHHHHHHHHHHHHH
T ss_pred ecCCC--CCCcchhHhhCCCCCCEEEEecCCCC-Cc--ccCCCcCChhhCCHHHHHHHHHHHHHHHHH
Confidence 11222 358999999999 999999874332 22 468999999999999999999999988753
No 15
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.43 E-value=9.1e-12 Score=120.19 Aligned_cols=195 Identities=13% Similarity=0.103 Sum_probs=135.0
Q ss_pred cceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCC---C--------------CCCCCCCchhHHHHHHHHHHHHHhcc
Q 014338 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP---A--------------LSVGSDSNGSGVVALLEVARLFSLLY 262 (426)
Q Consensus 200 ~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p---~--------------~~~GAddn~SG~a~LLElar~~~~l~ 262 (426)
..||++++ |.. .|+|++.+|+|+.+..+ | +..|+.|+.+|++++|++++.|.+..
T Consensus 51 ~~nv~a~~-g~~-------~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~grG~~D~k~g~a~~l~a~~~l~~~~ 122 (269)
T 4h2k_A 51 TLNLWAKH-GTS-------EPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKAN 122 (269)
T ss_dssp BCEEEEEE-CSS-------SCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHC
T ss_pred ceEEEEEe-CCC-------CCEEEEEeeecccCCCCcccccCCCCCeEEECCEEEeCCcccChHHHHHHHHHHHHHHHhC
Confidence 57999988 632 57999999999998632 1 35699999999999999999998764
Q ss_pred CCCCCCCcceEEEEEeCCCCCCCc-chHHHHHhccHhhhcCeeEEEEeccccCCCCceeEEecCCC-c-chHHHHHHHHH
Q 014338 263 SNPKTRGRYNILFGLTSGGPYNYN-GTHKWLRSFDQRLRESIDYAICLNSVGSWNNELWIHVSKPP-E-NAYIKQIFEGF 339 (426)
Q Consensus 263 ~~~~~~p~~~I~F~~~~gEe~g~~-GS~~~v~~~~~~~~~~i~~vinlD~iG~~~~~l~~hvs~~p-~-~~~~~~~~~~l 339 (426)
..++.+|.|+++.+||.|.. |++.+++.+... ..+..++|+.|..+.....-.+.....- . .+.-..+.+.+
T Consensus 123 ----~~~~~~i~~~~~~~EE~g~~~Ga~~~~~~~~~~-~~~~d~~i~~Ept~~~~~~~~i~~g~~G~G~~~~~~~l~~~l 197 (269)
T 4h2k_A 123 ----PNHKGTIALLITSDEEATAKDGTIHVVETLMAR-DEKITYCMVGEPSSAKNLGDVVKNGRRGGGFLTKPGKLLDSI 197 (269)
T ss_dssp ----TTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHT-TCCCCEEEECCCCBSSSTTSEEECSCTTCC------HHHHHH
T ss_pred ----CCCCccEEEEEEeccccCcccCHHHHHHHHHhc-CCCCCEEEEECCCCCCcCCceeEEecccccccCCCcHHHHHH
Confidence 24578999999999999985 999999875432 3567899999866432100011111100 0 00012466667
Q ss_pred HHHHHH-hCceeccccccccCCCCCCCcchhhhhcCCCeEEEEeecCCCCCccccCCCCCCCcCCCCHHHHHHHHHHHHH
Q 014338 340 TNVAEE-LGFKVGLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSAAPELLESTGGLLDSRHFVDETSFIRSVKLVAE 418 (426)
Q Consensus 340 ~~~a~~-~~~~~~~~~~ki~~~~~~~~~dHe~F~~~gIPa~tls~~~~~~~~~~~~~s~~Dt~d~ld~~~L~~~~~~iae 418 (426)
..+++. .+++..... ..-.+|+..|+..++|++.++.-. .+ .|++. |.++.+.+.+.++++.+
T Consensus 198 ~~aa~~~~gi~~~~~~-------~gggtDa~~~~~~g~p~~~~~~~~---~~---~Hs~~---E~v~~~d~~~~~~ll~~ 261 (269)
T 4h2k_A 198 TSAIEETIGITPKAET-------GGGTSDGRFIALMGAEVVEFGPLN---ST---IHKVN---ECVSVEDLGKCGEIYHK 261 (269)
T ss_dssp HHHHHHHHSCCCEEEC-------C--CHHHHHHHTTTCEEEECCSBC---TT---TTSTT---CEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCEEec-------CCCCchHHHHHhhCCCEEEEEeCC---CC---CcCCc---ccccHHHHHHHHHHHHH
Confidence 666665 566554321 112468888998999999987542 22 25666 57889999999999998
Q ss_pred HHHHH
Q 014338 419 SLAVS 423 (426)
Q Consensus 419 ~la~~ 423 (426)
.+.+.
T Consensus 262 ~l~~l 266 (269)
T 4h2k_A 262 MLVNL 266 (269)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88765
No 16
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.42 E-value=3.8e-12 Score=122.71 Aligned_cols=194 Identities=14% Similarity=0.117 Sum_probs=135.5
Q ss_pred cceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCC---C--------------CCCCCCCchhHHHHHHHHHHHHHhcc
Q 014338 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP---A--------------LSVGSDSNGSGVVALLEVARLFSLLY 262 (426)
Q Consensus 200 ~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p---~--------------~~~GAddn~SG~a~LLElar~~~~l~ 262 (426)
..||++++ |.+ .|+|++.+|||+++..+ | +..|+.|+.+|++++|++++.|.+..
T Consensus 51 ~~nv~a~~-g~~-------~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~ 122 (268)
T 3t68_A 51 TTNFWARR-GTQ-------SPLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEH 122 (268)
T ss_dssp EEC-CEEE-CSS-------SCEEEEEEECCBCCCCCGGGCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHC
T ss_pred ccEEEEEe-CCC-------CCeEEEEccccccCCCCcccCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHHhC
Confidence 46899988 632 57999999999998632 1 45799999999999999999998764
Q ss_pred CCCCCCCcceEEEEEeCCCCCCC-cchHHHHHhccHhhhcCeeEEEEeccccCC--CCceeEEe-cCCC-cchHHHHHHH
Q 014338 263 SNPKTRGRYNILFGLTSGGPYNY-NGTHKWLRSFDQRLRESIDYAICLNSVGSW--NNELWIHV-SKPP-ENAYIKQIFE 337 (426)
Q Consensus 263 ~~~~~~p~~~I~F~~~~gEe~g~-~GS~~~v~~~~~~~~~~i~~vinlD~iG~~--~~~l~~hv-s~~p-~~~~~~~~~~ 337 (426)
..++.+|.|+++.+||.|. .|++.+++..... ..+..++|++|..+.. ++.+..-. +.|. .+. ..+.+
T Consensus 123 ----~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~-~~~~d~~i~~ept~~~~~~~~i~~g~~G~p~~~~~--~~l~~ 195 (268)
T 3t68_A 123 ----PDHQGSIGFLITSDEEGPFINGTVRVVETLMAR-NELIDMCIVGEPSSTLAVGDVVKNGRRGGGFLTDT--GELLA 195 (268)
T ss_dssp ----TTCSSEEEEEEESCTTSSSCCHHHHHHHHHHHT-TCCCCEEEECSCCBSSSTTSEEEECCGGGGTSCCC--CHHHH
T ss_pred ----CCCCCcEEEEEEeCCccCcccCHHHHHHHHHhc-CCCCCEEEEeCCCCCccCCceeEEecCCCcccCCc--hHHHH
Confidence 2457899999999999998 4999999875432 3567899999976542 12221111 1122 111 23666
Q ss_pred HHHHHHHH-hCceeccccccccCCCCCCCcchhhhhcCCCeEEEEeecCCCCCccccCCCCCCCcCCCCHHHHHHHHHHH
Q 014338 338 GFTNVAEE-LGFKVGLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSAAPELLESTGGLLDSRHFVDETSFIRSVKLV 416 (426)
Q Consensus 338 ~l~~~a~~-~~~~~~~~~~ki~~~~~~~~~dHe~F~~~gIPa~tls~~~~~~~~~~~~~s~~Dt~d~ld~~~L~~~~~~i 416 (426)
.+.+++++ .|++..... ..-..|+..|++.++|++.|..-. .+ .||+. |.++.+.+.+.++++
T Consensus 196 ~l~~a~~~~~gi~~~~~~-------sgggtD~~~~~~~g~p~~~~~~~~---~~---~Hs~~---E~v~~~d~~~~~~vl 259 (268)
T 3t68_A 196 AVVAAVEEVNHQAPALLT-------TGGTSDGRFIAQMGAQVVELGPVN---AT---IHKVN---ECVRIADLEKLTDMY 259 (268)
T ss_dssp HHHHHHHHHHSSCCEEES-------SCCCHHHHHHHHHTCEEEECCSBC---TT---TTSTT---CEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcEEec-------CccccHHHHHHhcCCCEEEEeeCC---CC---CCCcc---ccccHHHHHHHHHHH
Confidence 66666666 476554311 112468888999999999886532 22 25666 468889999999999
Q ss_pred HHHHHHHh
Q 014338 417 AESLAVSL 424 (426)
Q Consensus 417 ae~la~~~ 424 (426)
.+.+.+.+
T Consensus 260 ~~~l~~l~ 267 (268)
T 3t68_A 260 QKTLNHLL 267 (268)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 98887653
No 17
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.15 E-value=3.1e-10 Score=113.44 Aligned_cols=154 Identities=14% Similarity=0.107 Sum_probs=99.6
Q ss_pred CCCchhHHHHHHHHHHHHHhccCCCCCCCcceEEEEEeCCCCCCCcchHHHHHhccHhhhcCeeEEEEeccccCCCC---
Q 014338 241 SDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWNN--- 317 (426)
Q Consensus 241 Addn~SG~a~LLElar~~~~l~~~~~~~p~~~I~F~~~~gEe~g~~GS~~~v~~~~~~~~~~i~~vinlD~iG~~~~--- 317 (426)
+.||.+|++++|++++.|.+.. .+++++|.|+++..||.|..|++.+ ..+..++|++|+.+..+.
T Consensus 184 ~~D~k~g~a~~l~a~~~l~~~~----~~~~~~i~~~~~~~EE~G~~g~~~~--------~~~~~~~i~~D~~~~~~~p~~ 251 (349)
T 2gre_A 184 HLDDKVSVAILLKLIKRLQDEN----VTLPYTTHFLISNNEEIGYGGNSNI--------PEETVEYLAVDMGALGDGQAS 251 (349)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHT----CCCSEEEEEEEESCC----CCCCCC--------CTTEEEEEEECCCCCSCC--C
T ss_pred eccchHHHHHHHHHHHHHHhcc----CCCCceEEEEEECcccCCchhhccc--------ccCCCEEEEEecccccCCCCC
Confidence 6899999999999999998753 3467899999999999999999975 134789999999776421
Q ss_pred ---ceeEE--ecCCCcchHHHHHHHHHHHHHHHhCceeccccccccCCCCCCCcchhhh--hcCCCeEEEEeecCCCCCc
Q 014338 318 ---ELWIH--VSKPPENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQF--SRLRVTAATLSELSAAPEL 390 (426)
Q Consensus 318 ---~l~~h--vs~~p~~~~~~~~~~~l~~~a~~~~~~~~~~~~ki~~~~~~~~~dHe~F--~~~gIPa~tls~~~~~~~~ 390 (426)
...+. -..++.+ ..+.+.+.+++++.|++++... . ....+|+..| +..|+|++++.-- . .
T Consensus 252 ~~~g~~i~~~~~~~~~~---~~l~~~l~~~a~~~gi~~q~~~---~---~ggGsDa~~~~~~~~GiPt~~lg~~-~--~- 318 (349)
T 2gre_A 252 DEYTVSICAKDSSGPYH---YALRKHLVELAKTNHIEYKVDI---Y---PYYGSDASAAIRAGFDVKHALIGAG-I--D- 318 (349)
T ss_dssp CTTSEEEEEEETTEECC---HHHHHHHHHHHHHHTCCEEEEE---C---SCC--------CCSSSCEEEEEEEC-C--B-
T ss_pred CCCceEEEEccCCCCCC---HHHHHHHHHHHHHcCCCcEEec---c---CCCCccHHHHHHhCCCCcEEEeccC-c--c-
Confidence 11111 1122222 3566667777888787766411 1 1235788888 4589999988642 2 1
Q ss_pred cccCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhc
Q 014338 391 LESTGGLLDSRHFVDETSFIRSVKLVAESLAVSLI 425 (426)
Q Consensus 391 ~~~~~s~~Dt~d~ld~~~L~~~~~~iae~la~~~~ 425 (426)
+.|| .|.++.+.+...++++.+.+.+.+|
T Consensus 319 --~~Hs----~E~~~~~dl~~~~~ll~~~l~~~~~ 347 (349)
T 2gre_A 319 --SSHA----FERTHESSIAHTEALVYAYVMSNLI 347 (349)
T ss_dssp --STTS----SEEEEHHHHHHHHHHHHHHHHSCCC
T ss_pred --cccc----ceeccHHHHHHHHHHHHHHHhcccc
Confidence 2355 4788999999999999988876544
No 18
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.14 E-value=4.2e-10 Score=111.41 Aligned_cols=150 Identities=15% Similarity=0.131 Sum_probs=103.6
Q ss_pred CCCchhHHHHHHHHHHHHHhccCCCCCCCcceEEEEEeCCCCCCCcchHHHHHhccHhhhcCeeEEEEeccccCCC----
Q 014338 241 SDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWN---- 316 (426)
Q Consensus 241 Addn~SG~a~LLElar~~~~l~~~~~~~p~~~I~F~~~~gEe~g~~GS~~~v~~~~~~~~~~i~~vinlD~iG~~~---- 316 (426)
|.||.+|++++|++++.|.+. .++++|.|+++..||.|..|++++++. .+..++|++|+.+..+
T Consensus 171 a~D~k~g~a~~l~a~~~l~~~------~~~~~i~~~~~~~EE~G~~G~~~~~~~------~~~~~~i~~d~~~~~~~p~~ 238 (332)
T 2wyr_A 171 GLDDRFGVVALIEAIKDLVDH------ELEGKVIFAFTVQEEVGLKGAKFLANH------YYPQYAFAIDSFACCSPLTG 238 (332)
T ss_dssp THHHHHHHHHHHHHHHTTTTS------CCSSEEEEEEESCGGGTSHHHHHHTTT------CCCSEEEEECCEECCSGGGT
T ss_pred cCCcHHHHHHHHHHHHHHhhc------CCCceEEEEEECccccCcchHHHHhcc------cCCCEEEEEecccccCCCCC
Confidence 689999999999999998753 146899999999999999999998643 2346899999876531
Q ss_pred -----CceeEEe--cCCCcchHHHHHHHHHHHHHHHhCceeccccccccCCCCCCCcchhhhhcCCCeEEEEeecCCCCC
Q 014338 317 -----NELWIHV--SKPPENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSAAPE 389 (426)
Q Consensus 317 -----~~l~~hv--s~~p~~~~~~~~~~~l~~~a~~~~~~~~~~~~ki~~~~~~~~~dHe~F~~~gIPa~tls~~~~~~~ 389 (426)
....+.+ ...+.+ ..+.+.+.+++++.|++...... ...+|+..|.. |||++.+... .
T Consensus 239 ~~~lg~G~~i~~~d~~~~~~---~~l~~~l~~~~~~~gi~~~~~~~-------~ggtDa~~~~~-GiPtv~lg~~-~--- 303 (332)
T 2wyr_A 239 DVKLGKGPVIRAVDNSAIYS---RDLARKVWSIAEKNGIEIQIGVT-------GGGTDASAFQD-RSKTLALSVP-I--- 303 (332)
T ss_dssp TCCTTSCCEEEEECSSCBCC---HHHHHHHHHHHHHTTCCCEEEEC-------SSCCGGGGGTT-TSEEEEEECE-E---
T ss_pred ceeeCCCCEEEEcCCCCCCC---HHHHHHHHHHHHHcCCCeEEecC-------CCCchHHHHHc-CCCEEEEcCC-c---
Confidence 0111111 111222 34566666667776765543211 13578999988 9999988642 1
Q ss_pred ccccCCCCCCCcCCCCHHHHHHHHHHHHHHHHH
Q 014338 390 LLESTGGLLDSRHFVDETSFIRSVKLVAESLAV 422 (426)
Q Consensus 390 ~~~~~~s~~Dt~d~ld~~~L~~~~~~iae~la~ 422 (426)
. +.|++. |.++.+.+.+.+++++..+.+
T Consensus 304 ~--~~Hs~~---E~v~~~dl~~~~~ll~~~~~~ 331 (332)
T 2wyr_A 304 K--YLHSEV---ETLHLNDLEKLVKLIEALAFE 331 (332)
T ss_dssp B--SCSSTT---CEEEHHHHHHHHHHHHHHHHH
T ss_pred C--CCCChh---hcccHHHHHHHHHHHHHHHHh
Confidence 1 245654 678899999999988877654
No 19
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.13 E-value=7.3e-10 Score=111.75 Aligned_cols=153 Identities=14% Similarity=0.050 Sum_probs=103.5
Q ss_pred CCCchhHHHHHHHHHHHHHhccCCCCCCCcceEEEEEeCCCCCCCcchHHHHHhccHhhhcCeeEEEEeccccCCC--C-
Q 014338 241 SDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWN--N- 317 (426)
Q Consensus 241 Addn~SG~a~LLElar~~~~l~~~~~~~p~~~I~F~~~~gEe~g~~GS~~~v~~~~~~~~~~i~~vinlD~iG~~~--~- 317 (426)
+.||.+|++++|++++.|.+. .++++|.|+++..||.|..|++.+.+.. +..++|++|+.+..+ +
T Consensus 182 ~~D~k~g~a~~l~a~~~l~~~------~~~~~v~~~~~~~EE~G~~G~~~~~~~~------~~d~~i~~d~~~~~~~~g~ 249 (373)
T 1vhe_A 182 AWDNRIGCAIAIDVLRNLQNT------DHPNIVYGVGTVQEEVGLRGAKTAAHTI------QPDIAFGVDVGIAGDTPGI 249 (373)
T ss_dssp THHHHHHHHHHHHHHHHHHTS------CCSSEEEEEEESCCTTTSHHHHHHHHHH------CCSEEEEEEEEECCCSTTC
T ss_pred cCccHHHHHHHHHHHHHHhhc------CCCceEEEEEECCcccChhhHHHHhccc------CCCEEEEEeccccCCCCCC
Confidence 789999999999999999764 2468999999999999999999885431 245788888765421 0
Q ss_pred -----------ceeEEecCCCcchHHHHHHHHHHHHHHHhCceecc-ccccccCCCCCCCcchhhh--hcCCCeEEEEee
Q 014338 318 -----------ELWIHVSKPPENAYIKQIFEGFTNVAEELGFKVGL-KHKKINISNPRVAWEHEQF--SRLRVTAATLSE 383 (426)
Q Consensus 318 -----------~l~~hvs~~p~~~~~~~~~~~l~~~a~~~~~~~~~-~~~ki~~~~~~~~~dHe~F--~~~gIPa~tls~ 383 (426)
...+.+..++. ..-..+.+.+.+++++.|+++.. .. ....+|+..| +..|||++.+..
T Consensus 250 ~~~~~~~~lg~G~~i~~~~~~~-~~~~~l~~~l~~~a~~~gi~~~~~~~-------~~ggtDa~~~~~~~~GiPtv~lg~ 321 (373)
T 1vhe_A 250 SEKEAQSKMGKGPQIIVYDASM-VSHKGLRDAVVATAEEAGIPYQFDAI-------AGGGTDSGAIHLTANGVPALSITI 321 (373)
T ss_dssp CTTTCCCCTTSCCEEEEEETTE-ECCHHHHHHHHHHHHHHTCCCEEEEE-------TTCCCTHHHHTTSTTCCCEEEEEE
T ss_pred cccccccccCCCceEEEeCCCC-CCCHHHHHHHHHHHHHcCCCeEEecC-------CCCCccHHHHHHhCCCCcEEEEcc
Confidence 00111101110 01235566666767777766553 11 1235789889 678999998864
Q ss_pred cCCCCCccccCCCCCCCcCCCCHHHHHHHHHHHHHHHHH
Q 014338 384 LSAAPELLESTGGLLDSRHFVDETSFIRSVKLVAESLAV 422 (426)
Q Consensus 384 ~~~~~~~~~~~~s~~Dt~d~ld~~~L~~~~~~iae~la~ 422 (426)
. . . ..|++. |.++.+.+.+.++++++.+.+
T Consensus 322 ~-~-~----~~Hs~~---E~v~~~dl~~~~~ll~~~l~~ 351 (373)
T 1vhe_A 322 A-T-R----YIHTHA---AMLHRDDYENAVKLITEVIKK 351 (373)
T ss_dssp E-E-B----STTSSC---EEEEHHHHHHHHHHHHHHHHH
T ss_pred c-c-c----cCCChh---heecHHHHHHHHHHHHHHHHH
Confidence 2 1 1 235654 678899999999988887765
No 20
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.07 E-value=1.2e-09 Score=109.36 Aligned_cols=151 Identities=16% Similarity=0.109 Sum_probs=103.9
Q ss_pred CCCchhHHHHHHHHHHHHHhccCCCCCCCcceEEEEEeCCCCCCCcchHHHHHhccHhhhcCeeEEEEeccccCCCCc--
Q 014338 241 SDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWNNE-- 318 (426)
Q Consensus 241 Addn~SG~a~LLElar~~~~l~~~~~~~p~~~I~F~~~~gEe~g~~GS~~~v~~~~~~~~~~i~~vinlD~iG~~~~~-- 318 (426)
|.||.+|++++|++++.|.+ ++++|.|+++..||.|..|++.++... +..++|++|+.+..+..
T Consensus 180 a~D~k~g~a~~l~a~~~l~~--------~~~~i~~~~~~~EE~g~~G~~~~~~~~------~~~~~i~~d~~~~~~~p~~ 245 (353)
T 1y0y_A 180 AFDDRIAVYTILEVAKQLKD--------AKADVYFVATVQEEVGLRGARTSAFGI------EPDYGFAIDVTIAADIPGT 245 (353)
T ss_dssp THHHHHHHHHHHHHHHHCCS--------CSSEEEEEEESCCTTTSHHHHHHHHHH------CCSEEEEEEEEECCCSTTC
T ss_pred cCccHHHHHHHHHHHHHhhc--------CCCeEEEEEECCcccchhHHHHHhhcc------CCCEEEEEecccccCCCCC
Confidence 68999999999999999754 467999999999999999999986432 34688999887643100
Q ss_pred --------------eeEEecCCCcchHHHHHHHHHHHHHHHhCceeccccccccCCCCCCCcchhhh--hcCCCeEEEEe
Q 014338 319 --------------LWIHVSKPPENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQF--SRLRVTAATLS 382 (426)
Q Consensus 319 --------------l~~hvs~~p~~~~~~~~~~~l~~~a~~~~~~~~~~~~ki~~~~~~~~~dHe~F--~~~gIPa~tls 382 (426)
+.+.-...+.+ ..+.+.+.+++++.|++++... . ....+|+..| +..|||++.+.
T Consensus 246 ~~~~g~~~lg~G~~i~~~d~~~~~~---~~l~~~l~~~a~~~gi~~~~~~---~---~~ggsDa~~~~~~~~GiPtv~lg 316 (353)
T 1y0y_A 246 PEHKQVTHLGKGTAIKIMDRSVICH---PTIVRWLEELAKKHEIPYQLEI---L---LGGGTDAGAIHLTKAGVPTGALS 316 (353)
T ss_dssp CGGGCCCCTTSCEEEEEEETTEECC---HHHHHHHHHHHHHTTCCEEEEE---C---SSCCCTHHHHTTSTTCCCEEEEE
T ss_pred ccccCccccCCCcEEEEeCCCCCCC---HHHHHHHHHHHHHcCCCEEEee---c---CCCCchHHHHHHhCCCCcEEEEc
Confidence 11100111112 3566666677777777665311 0 1235799999 67899999987
Q ss_pred ecCCCCCccccCCCCCCCcCCCCHHHHHHHHHHHHHHHHHH
Q 014338 383 ELSAAPELLESTGGLLDSRHFVDETSFIRSVKLVAESLAVS 423 (426)
Q Consensus 383 ~~~~~~~~~~~~~s~~Dt~d~ld~~~L~~~~~~iae~la~~ 423 (426)
.. . . ..||+. |.++.+.+.+.++++++.+.+.
T Consensus 317 ~~-~-~----~~Hs~~---E~v~~~dl~~~~~ll~~~l~~l 348 (353)
T 1y0y_A 317 VP-A-R----YIHSNT---EVVDERDVDATVELMTKALENI 348 (353)
T ss_dssp EE-E-B----SCSSSC---EEEEHHHHHHHHHHHHHHHHHG
T ss_pred cc-c-c----ccCCHH---HhcCHHHHHHHHHHHHHHHHhh
Confidence 42 1 1 245654 6788899999999888877653
No 21
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=98.98 E-value=9.4e-10 Score=109.45 Aligned_cols=150 Identities=14% Similarity=0.134 Sum_probs=88.5
Q ss_pred CCCchhHHHHHHHHHHHHHhccCCCCCCCcceEEEEEeCCCCCCCcchHHHHHhccHhhhcCeeEEEEeccccCCC--Cc
Q 014338 241 SDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWN--NE 318 (426)
Q Consensus 241 Addn~SG~a~LLElar~~~~l~~~~~~~p~~~I~F~~~~gEe~g~~GS~~~v~~~~~~~~~~i~~vinlD~iG~~~--~~ 318 (426)
|.||.+|++++|++++.|. +++++|.|+++..||.|..|++.+++.. +..++|++|+.+..+ +.
T Consensus 165 a~D~k~g~a~~l~a~~~l~--------~~~~~i~~~~~~~EE~G~~G~~~~~~~~------~~~~~i~~d~~~~~~~~G~ 230 (340)
T 2fvg_A 165 AFDDRAGCSVLIDVLESGV--------SPAYDTYFVFTVQEETGLRGSAVVVEQL------KPTCAIVVETTTAGDNPEL 230 (340)
T ss_dssp CHHHHHHHHHHHHHHHTCC--------CCSEEEEEEEECCCC-----CHHHHHHH------CCSEEEEEEEEEECSCSTT
T ss_pred cCccHHHHHHHHHHHHHhh--------ccCCcEEEEEEcccccchhhhHHHhhcc------CCCEEEEEecccCCCCCCC
Confidence 6899999999999999875 2478999999999999999999998742 235788888764320 00
Q ss_pred eeEEec---------------CCCcchHHHHHHHHHHHHHHHhCceeccccccccCCCCCCCcchhhhhc--CCCeEEEE
Q 014338 319 LWIHVS---------------KPPENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQFSR--LRVTAATL 381 (426)
Q Consensus 319 l~~hvs---------------~~p~~~~~~~~~~~l~~~a~~~~~~~~~~~~ki~~~~~~~~~dHe~F~~--~gIPa~tl 381 (426)
- -|.+ ....+ ..+.+.+++++++.+++..... .....+|+..|.. .|||++.+
T Consensus 231 ~-~h~~~~~~G~g~~i~~~~~~~~~~---~~l~~~l~~~a~~~gi~~~~~~------~~~ggtDa~~~~~~~~GiP~v~~ 300 (340)
T 2fvg_A 231 E-ERKWATHLGDGPAITFYHRGYVIP---KEIFQTIVDTAKNNDIPFQMKR------RTAGGTDAGRYARTAYGVPAGVI 300 (340)
T ss_dssp C-CSSSSCCTTSCCEECSCCSSSCCC---HHHHHHHHHHHHHTTCCCEECC------CC-------------CCSCEEEE
T ss_pred c-cccCCcccCCCcEEEEeCCCCCCC---HHHHHHHHHHHHHcCCCeEEEe------cCCCCccHHHHHhhCCCCcEEEe
Confidence 0 0111 01112 2355566666777676654310 1123568888876 79999988
Q ss_pred eecCCCCCccccCCCCCCCcCCCCHHHHHHHHHHHHHHHHHH
Q 014338 382 SELSAAPELLESTGGLLDSRHFVDETSFIRSVKLVAESLAVS 423 (426)
Q Consensus 382 s~~~~~~~~~~~~~s~~Dt~d~ld~~~L~~~~~~iae~la~~ 423 (426)
.... . ..|++. |.++.+.+.+.+++++..+.++
T Consensus 301 g~~~----~--~~Hs~~---E~v~~~dl~~~~~ll~~~~~~l 333 (340)
T 2fvg_A 301 STPA----R--YIHSPN---SIIDLNDYENTKKLIKVLVEEG 333 (340)
T ss_dssp EEEE----E--ESSTTC---EEEEHHHHHHHHHHHHHHHHHC
T ss_pred cccc----c--ccCChh---hcccHHHHHHHHHHHHHHHHhc
Confidence 6431 1 245665 5688889999998888776653
No 22
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=98.89 E-value=5.9e-09 Score=95.93 Aligned_cols=99 Identities=12% Similarity=0.072 Sum_probs=76.8
Q ss_pred cceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCC-----------------CCCCCCCCchhHHHHHHHHHHHHHhcc
Q 014338 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP-----------------ALSVGSDSNGSGVVALLEVARLFSLLY 262 (426)
Q Consensus 200 ~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p-----------------~~~~GAddn~SG~a~LLElar~~~~l~ 262 (426)
..|++++++|.++ ..|.|++.||+|+.+..+ -++.|+.|+.+|++++|++++.|.+..
T Consensus 58 ~~~~i~~~~g~~~-----~~~~ill~aH~DtVp~~~~~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~ 132 (198)
T 1q7l_A 58 YVVTVLTWPGTNP-----TLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEG 132 (198)
T ss_dssp EEEEEEEECCSST-----TSCEEEEEEECCBCCCCGGGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTT
T ss_pred CeEEEEEEccCCC-----CCCeEEEEeeecccCCCcccCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHHcC
Confidence 4699999988541 258999999999987621 136789999999999999999998753
Q ss_pred CCCCCCCcceEEEEEeCCCCCC-CcchHHHHHhccHhhhcCeeEEEE
Q 014338 263 SNPKTRGRYNILFGLTSGGPYN-YNGTHKWLRSFDQRLRESIDYAIC 308 (426)
Q Consensus 263 ~~~~~~p~~~I~F~~~~gEe~g-~~GS~~~v~~~~~~~~~~i~~vin 308 (426)
..++++|.|+++.+||.| ..|+++++++.... .-+..++|+
T Consensus 133 ----~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~-~~~~~~~id 174 (198)
T 1q7l_A 133 ----HRFPRTIHMTFVPDEEVGGHQGMELFVQRPEFH-ALRAGFALD 174 (198)
T ss_dssp ----CCCSSCEEEEEESCGGGTSTTTHHHHTTSHHHH-TTCEEEEEE
T ss_pred ----CCCCCCEEEEEEcccccCccccHHHHHHhHHhc-cCCcCEEEe
Confidence 346789999999999997 89999998864321 123455554
No 23
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=98.67 E-value=6.6e-08 Score=99.95 Aligned_cols=101 Identities=17% Similarity=0.153 Sum_probs=80.8
Q ss_pred ceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCC-----------------CCCCCCCCchhHHHHHHHHHHHHHhccC
Q 014338 201 TNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP-----------------ALSVGSDSNGSGVVALLEVARLFSLLYS 263 (426)
Q Consensus 201 ~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p-----------------~~~~GAddn~SG~a~LLElar~~~~l~~ 263 (426)
.||++++.|.. ..|+|++.||||+.+..+ -++.|+.|+..|++++|++++.|.+..
T Consensus 83 ~~v~a~~~~~~------~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~- 155 (479)
T 2zog_A 83 PILLGKLGSDP------QKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTG- 155 (479)
T ss_dssp CEEEEEECCCT------TSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTT-
T ss_pred CEEEEEecCCC------CCCeEEEEEecCCCCCCccccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHhC-
Confidence 79999997632 368999999999987621 136788999999999999999998764
Q ss_pred CCCCCCcceEEEEEeCCCCCCCcchHHHHHhccHhhhcCeeEEEEecc
Q 014338 264 NPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNS 311 (426)
Q Consensus 264 ~~~~~p~~~I~F~~~~gEe~g~~GS~~~v~~~~~~~~~~i~~vinlD~ 311 (426)
.+++++|.|+++.+||.|..|++.++++.......++.+++++|.
T Consensus 156 ---~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~~~~~~~~~d~~i~~e~ 200 (479)
T 2zog_A 156 ---QEIPVNLRFCLEGMEESGSEGLDELIFAQKDKFFKDVDYVCISDN 200 (479)
T ss_dssp ---CCCSSEEEEEEESCGGGTCTTHHHHHHHTTTTTTTTCCEEEECCC
T ss_pred ---CCCCCcEEEEEecccccCCccHHHHHHhhhhhhcccCCEEEEeCC
Confidence 346789999999999999999999998753222345778888874
No 24
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.61 E-value=9.9e-08 Score=95.19 Aligned_cols=96 Identities=21% Similarity=0.280 Sum_probs=75.9
Q ss_pred cceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCC-------------C--CCCCCCCchhHHHHHHHHHHHHHhccCC
Q 014338 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP-------------A--LSVGSDSNGSGVVALLEVARLFSLLYSN 264 (426)
Q Consensus 200 ~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p-------------~--~~~GAddn~SG~a~LLElar~~~~l~~~ 264 (426)
..||+++++|.+. +.|.|++.||+|+.+... + ++.|+.|+.+|++++|++++.|.+..
T Consensus 52 ~~nv~a~~~g~~~-----~~~~i~l~aH~D~vp~~~~w~~~p~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~-- 124 (356)
T 3ct9_A 52 GNNVWCLSPMFDL-----KKPTILLNSHIDTVKPVNGWRKDPFTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRTS-- 124 (356)
T ss_dssp TTEEEEECSSCCT-----TSCEEEEEEECCBCCCC-------CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTTSC--
T ss_pred eeeEEEEEecCCC-----CCCeEEEEccccccCCCCCCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHhcC--
Confidence 5799999987321 368999999999987631 1 47789999999999999999998642
Q ss_pred CCCCCcceEEEEEeCCCCC-CCcchHHHHHhccHhhhcCeeEEEEecc
Q 014338 265 PKTRGRYNILFGLTSGGPY-NYNGTHKWLRSFDQRLRESIDYAICLNS 311 (426)
Q Consensus 265 ~~~~p~~~I~F~~~~gEe~-g~~GS~~~v~~~~~~~~~~i~~vinlD~ 311 (426)
++++|.|+++.+||. |..|+++++++.. ++.++|+++.
T Consensus 125 ----~~~~v~~~~~~~EE~~g~~G~~~~~~~~~-----~~d~~i~~ep 163 (356)
T 3ct9_A 125 ----QNYNLIYLASCEEEVSGKEGIESVLPGLP-----PVSFAIVGEP 163 (356)
T ss_dssp ----CSSEEEEEEECCGGGTCTTTHHHHGGGSC-----CCSEEEECCS
T ss_pred ----CCCCEEEEEEeCcccCCccCHHHHHhhCC-----CCCEEEEcCC
Confidence 578999999999998 9999999988641 3345555543
No 25
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=98.59 E-value=1.6e-07 Score=97.58 Aligned_cols=103 Identities=17% Similarity=0.124 Sum_probs=82.4
Q ss_pred cceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCC-----------------CCCCCCCCchhHHHHHHHHHHHHHhcc
Q 014338 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP-----------------ALSVGSDSNGSGVVALLEVARLFSLLY 262 (426)
Q Consensus 200 ~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p-----------------~~~~GAddn~SG~a~LLElar~~~~l~ 262 (426)
..||++++.|.. ..|+|++.||||+.+..+ -++.|++|+..|++++|++++.|.+..
T Consensus 89 ~~~v~a~~~~~~------~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~ 162 (485)
T 3dlj_A 89 PPVILAELGSDP------TKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALE 162 (485)
T ss_dssp CCEEEEEECCCT------TSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTT
T ss_pred CcEEEEEECCCC------CCCEEEEEeeecCCCCCCcccCCCCCCccEEECCEEEecccccCcHHHHHHHHHHHHHHHhC
Confidence 358999996532 368999999999987631 135899999999999999999998864
Q ss_pred CCCCCCCcceEEEEEeCCCCCCCcchHHHHHhccHhhhcCeeEEEEeccc
Q 014338 263 SNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSV 312 (426)
Q Consensus 263 ~~~~~~p~~~I~F~~~~gEe~g~~GS~~~v~~~~~~~~~~i~~vinlD~i 312 (426)
..++.+|.|++..+||.|..|++.++++.....++++.+++++|..
T Consensus 163 ----~~~~~~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~~d~~~~~~~~ 208 (485)
T 3dlj_A 163 ----QDLPVNIKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNL 208 (485)
T ss_dssp ----CCCSSEEEEEEESCGGGTTTTHHHHHHHHTTTTSTTCCEEEECCCB
T ss_pred ----CCCCccEEEEEEcccccCCccHHHHHHhhhhhcccCCCEEEEcCCC
Confidence 3467899999999999999999999987532224578889988853
No 26
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=98.58 E-value=2e-07 Score=96.65 Aligned_cols=102 Identities=16% Similarity=0.155 Sum_probs=80.3
Q ss_pred cceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCC-----------------CCCCCCCCchhHHHHHHHHHHHHHhcc
Q 014338 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP-----------------ALSVGSDSNGSGVVALLEVARLFSLLY 262 (426)
Q Consensus 200 ~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p-----------------~~~~GAddn~SG~a~LLElar~~~~l~ 262 (426)
..||+++++|... ..|.|++.||+|+++..+ -++.|+.|+.+|++++|++++.|.+..
T Consensus 92 ~~~v~a~~~g~~~-----~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~~ 166 (481)
T 2pok_A 92 APFVMAHFKSSRP-----DAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHH 166 (481)
T ss_dssp SCEEEEEECCSST-----TCCEEEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEEecCCCC-----CCCeEEEEEeccCcCCCCccccccCCCCceeeCCeEEccccccCcHHHHHHHHHHHHHHHhc
Confidence 5799999987531 368999999999987632 146789999999999999999999863
Q ss_pred CCCCCCCcceEEEEEeCCCCCCCcchHHHHHhccHhhhcCeeEEEEecc
Q 014338 263 SNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNS 311 (426)
Q Consensus 263 ~~~~~~p~~~I~F~~~~gEe~g~~GS~~~v~~~~~~~~~~i~~vinlD~ 311 (426)
..++++|.|+++.+||.|..|++.++++... .+++..++|+.|.
T Consensus 167 ----~~~~~~v~~~~~~~EE~g~~g~~~~~~~~~~-~~~~~d~~i~~~~ 210 (481)
T 2pok_A 167 ----DDLPVNISFIMEGAEESASTDLDKYLEKHAD-KLRGADLLVWEQG 210 (481)
T ss_dssp ----SSCSSEEEEEEESCGGGTTTTHHHHHHHHHH-HHTTCSEEECSCC
T ss_pred ----CCCCCCEEEEEecccccCchhHHHHHHHhHh-hccCCCEEEECCC
Confidence 1457899999999999999999999986421 1233667777764
No 27
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=98.58 E-value=1.3e-07 Score=95.26 Aligned_cols=97 Identities=16% Similarity=0.190 Sum_probs=76.3
Q ss_pred cceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCC-------------CCCCCCCCchhHHHHHHHHHHHHHhccCCCC
Q 014338 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP-------------ALSVGSDSNGSGVVALLEVARLFSLLYSNPK 266 (426)
Q Consensus 200 ~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p-------------~~~~GAddn~SG~a~LLElar~~~~l~~~~~ 266 (426)
..||+++++|.+ .|+|++.+|+|+.+... -+..|+.|+-.|++++|++++.|.+..
T Consensus 70 ~~~v~a~~~g~~-------~~~i~l~aH~D~vp~~~~~~~~Pf~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~---- 138 (393)
T 1cg2_A 70 GDNIVGKIKGRG-------GKNLLLMSHMDTVYLKGILAKAPFRVEGDKAYGPGIADDKGGNAVILHTLKLLKEYG---- 138 (393)
T ss_dssp SEEEEEEEECSS-------CCCEEEEEECCBSCCTTHHHHSCCEEETTEEECTTTTTTHHHHHHHHHHHHHHHHTT----
T ss_pred CCeEEEEECCCC-------CceEEEEEecCcCCCCCccccCCeeeeCCEEEcCCcccchHHHHHHHHHHHHHHhcC----
Confidence 359999998743 47899999999987521 135788899999999999999998853
Q ss_pred CCCcceEEEEEeCCCCCCCcchHHHHHhccHhhhcCeeEEEEecc
Q 014338 267 TRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNS 311 (426)
Q Consensus 267 ~~p~~~I~F~~~~gEe~g~~GS~~~v~~~~~~~~~~i~~vinlD~ 311 (426)
..++.+|.|+++.+||.|..|++.++++.. .++.++|++|.
T Consensus 139 ~~~~~~v~~~~~~~EE~g~~G~~~~~~~~~----~~~d~~i~~e~ 179 (393)
T 1cg2_A 139 VRDYGTITVLFNTDEEKGSFGSRDLIQEEA----KLADYVLSFEP 179 (393)
T ss_dssp CCCSSEEEEEEESCGGGTTTTTHHHHHHHH----HHCSEEEECCC
T ss_pred CCCCCCEEEEEEcccccCCccHHHHHHHHh----hcCCEEEEeCC
Confidence 235679999999999999999999998632 23556666654
No 28
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=98.57 E-value=1.7e-07 Score=95.02 Aligned_cols=79 Identities=15% Similarity=0.068 Sum_probs=68.0
Q ss_pred ceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCcceEEEEEeCC
Q 014338 201 TNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSG 280 (426)
Q Consensus 201 ~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p~~~~GAddn~SG~a~LLElar~~~~l~~~~~~~p~~~I~F~~~~g 280 (426)
.||+|+++|.++ ..|.|++.||+|+++. .|+.|+.+|++++|++++.|.+.. ..++++|.|+++.+
T Consensus 58 gnv~a~~~g~~~-----~~~~i~l~aH~D~v~~-----~g~~d~~~g~a~~l~~~~~l~~~~----~~~~~~i~~~~~~~ 123 (408)
T 3n5f_A 58 GNLIGRKEGTNP-----DATVVLVGSHLDSVYN-----GGCFDGPLGVLAGVEVVQTMNEHG----VVTHHPIEVVAFTD 123 (408)
T ss_dssp CCEEEEECCSST-----TSCEEEEEEESCCCTT-----BCSSTTHHHHHHHHHHHHHHHHTT----CCCSSCEEEEEESC
T ss_pred CCEEEEecCCCC-----CCCEEEEEecCCCCCC-----CCccCCHHHHHHHHHHHHHHHHcC----CCCCCCEEEEEEcC
Confidence 399999998652 2689999999999974 578899999999999999999764 34689999999999
Q ss_pred CCC-----CCcchHHHHH
Q 014338 281 GPY-----NYNGTHKWLR 293 (426)
Q Consensus 281 Ee~-----g~~GS~~~v~ 293 (426)
||. |+.||+.++.
T Consensus 124 EE~~~~~~g~~Gs~~~~~ 141 (408)
T 3n5f_A 124 EEGARFRFGMIGSRAMAG 141 (408)
T ss_dssp SSCTTTTCCCHHHHHHHT
T ss_pred ccccccCCCCcCHHHHHc
Confidence 995 7889999984
No 29
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=98.52 E-value=2.4e-07 Score=94.36 Aligned_cols=99 Identities=10% Similarity=0.014 Sum_probs=78.1
Q ss_pred CcceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCC-----------------CCCCCCCCchhHHHHHHHHHHHHHhc
Q 014338 199 TITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP-----------------ALSVGSDSNGSGVVALLEVARLFSLL 261 (426)
Q Consensus 199 ~~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p-----------------~~~~GAddn~SG~a~LLElar~~~~l 261 (426)
...||+|+++|.. +.|+|++.||||+.+..+ -++.|+.|+-+|++++|++++.|.+.
T Consensus 89 ~~~~via~~~g~~------~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~ 162 (433)
T 3pfo_A 89 GSMQVVATADSDG------KGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTA 162 (433)
T ss_dssp GCEEEEEEECCCC------CSCCEEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEEEecCC------CCCEEEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHc
Confidence 3589999998743 368999999999998632 02459999999999999999999876
Q ss_pred cCCCCCCCcceEEEEEeCCCCCCCcchHHHHHhccHhhhcCeeEEEEeccc
Q 014338 262 YSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSV 312 (426)
Q Consensus 262 ~~~~~~~p~~~I~F~~~~gEe~g~~GS~~~v~~~~~~~~~~i~~vinlD~i 312 (426)
. ..++.+|.|+++.+||.|..|++.++++- -+..++|+.|-.
T Consensus 163 ~----~~~~~~v~~~~~~~EE~g~~G~~~~~~~~-----~~~d~~i~~ep~ 204 (433)
T 3pfo_A 163 G----YAPDARVHVQTVTEEESTGNGALSTLMRG-----YRADACLIPEPT 204 (433)
T ss_dssp T----EEESSCEEEEEESCTTTTCHHHHHHHHTT-----CCCSEEEECCCC
T ss_pred C----CCCCccEEEEEEecCccCChhHHHHHhcC-----CCCCEEEEeCCC
Confidence 3 23578999999999999889999998752 245666666643
No 30
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=98.43 E-value=3.6e-06 Score=83.31 Aligned_cols=152 Identities=11% Similarity=0.048 Sum_probs=99.4
Q ss_pred CCCchhHHHHHHHHHHHHHhccCCCCCCCcceEEEEEeCCCCCCCcchHHHHHhccHhhhcCeeEEEEeccccCCCC---
Q 014338 241 SDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWNN--- 317 (426)
Q Consensus 241 Addn~SG~a~LLElar~~~~l~~~~~~~p~~~I~F~~~~gEe~g~~GS~~~v~~~~~~~~~~i~~vinlD~iG~~~~--- 317 (426)
+.||-.|+++++++++.+... .++.++.|+++.+||.|..|++....... -.++|.+|+....+.
T Consensus 167 ~~D~k~g~aa~l~al~~l~~~------~~~~~~~~~~t~~EEvG~~Ga~~~~~~i~------~~~~i~~D~~~~~~~~~~ 234 (348)
T 1ylo_A 167 AFDDRLSCYLLVTLLRELHDA------ELPAEVWLVASSSEEVGLRGGQTATRAVS------PDVAIVLDTACWAKNFDY 234 (348)
T ss_dssp THHHHHHHHHHHHHHHHHTTC------CCSSEEEEEEESCCTTSSHHHHHHHHHHC------CSEEEEECCCCCSSTTCC
T ss_pred CcccHHHHHHHHHHHHHhhhc------CCCceEEEEEEcccccchhHHHHhhcccC------CCEEEEEeccccCCCCCC
Confidence 467889999999999998643 14578999999999999999987654321 246678887654310
Q ss_pred ----------ceeEEe--cCCCcchHHHHHHHHHHHHHHHhCceeccccccccCCCCCCCcchhhhh--cCCCeEEEEee
Q 014338 318 ----------ELWIHV--SKPPENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQFS--RLRVTAATLSE 383 (426)
Q Consensus 318 ----------~l~~hv--s~~p~~~~~~~~~~~l~~~a~~~~~~~~~~~~ki~~~~~~~~~dHe~F~--~~gIPa~tls~ 383 (426)
...+.+ ...+.+ ..+.+.+.+++++.|++.+... . ....+|...|. ..|+|++.+.-
T Consensus 235 ~~~~~~~~~~G~~i~~~~~~~~~~---~~l~~~~~~~a~~~gi~~~~~~---~---~~ggsDa~~~~~~~~gipt~~lg~ 305 (348)
T 1ylo_A 235 GAANHRQIGNGPMLVLSDKSLIAP---PKLTAWIETVAAEIGVPLQADM---F---SNGGTDGGAVHLTGTGVPTLVMGP 305 (348)
T ss_dssp STTCCCCTTSCCEEEEECSSCBCC---HHHHHHHHHHHHHHTCCCEEEE---C---SSCCCHHHHHHTSTTCCCEEEEEC
T ss_pred CccccccCCCCcEEEEeCCCCCCC---HHHHHHHHHHHHHcCCCeEEee---c---CCCcchHHHHHHhcCCCCEEEECc
Confidence 111111 122223 3566667777887777665411 0 12346777784 46999998864
Q ss_pred cCCCCCccccCCCCCCCcCCCCHHHHHHHHHHHHHHHHH
Q 014338 384 LSAAPELLESTGGLLDSRHFVDETSFIRSVKLVAESLAV 422 (426)
Q Consensus 384 ~~~~~~~~~~~~s~~Dt~d~ld~~~L~~~~~~iae~la~ 422 (426)
- .. ..||+. |.++.+.+...++++.+.+.+
T Consensus 306 ~-~~-----~~Hs~~---E~~~~~d~~~~~~ll~~~~~~ 335 (348)
T 1ylo_A 306 A-TR-----HGHCAA---SIADCRDILQMEQLLSALIQR 335 (348)
T ss_dssp C-CB-----SCSSSC---EEEEHHHHHHHHHHHHHHHHT
T ss_pred c-cC-----cCCCcc---eEeeHHHHHHHHHHHHHHHHH
Confidence 2 21 234554 678889999999888877654
No 31
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=98.35 E-value=2.6e-06 Score=85.74 Aligned_cols=98 Identities=21% Similarity=0.246 Sum_probs=74.2
Q ss_pred cceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCC---C--------------CCCCCCCchhHHHHHHHHHHHHHhcc
Q 014338 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP---A--------------LSVGSDSNGSGVVALLEVARLFSLLY 262 (426)
Q Consensus 200 ~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p---~--------------~~~GAddn~SG~a~LLElar~~~~l~ 262 (426)
..||++++ |.+ .|+|++.+|+|+.+..+ | ++.|+.|+-.|++++|++++.|.+..
T Consensus 51 ~~nv~a~~-g~~-------~~~i~l~~H~D~Vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~aa~l~a~~~l~~~~ 122 (393)
T 1vgy_A 51 TKNIWLRR-GTK-------APVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKH 122 (393)
T ss_dssp BCEEEEEE-CSS-------SSEEEEEEECCBCCCCCGGGSSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHC
T ss_pred CcEEEEEE-CCC-------CCEEEEEcccCCcCCCCcccCCCCCCceEEECCEEEecCcccchHHHHHHHHHHHHHHHhc
Confidence 56999998 632 57999999999998632 1 46788899999999999999988754
Q ss_pred CCCCCCCcceEEEEEeCCCCC-CCcchHHHHHhccHhhhcCeeEEEEec
Q 014338 263 SNPKTRGRYNILFGLTSGGPY-NYNGTHKWLRSFDQRLRESIDYAICLN 310 (426)
Q Consensus 263 ~~~~~~p~~~I~F~~~~gEe~-g~~GS~~~v~~~~~~~~~~i~~vinlD 310 (426)
..++.+|.|+++.+||. +..|++.+++..... ..++.+++..+
T Consensus 123 ----~~~~~~v~~~~~~~EE~~~~~Ga~~~~~~~~~~-~~~~d~~i~~e 166 (393)
T 1vgy_A 123 ----PNHQGSIALLITSDEEGDALDGTTKVVDVLKAR-DELIDYCIVGE 166 (393)
T ss_dssp ----TTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHT-TCCEEEEEECC
T ss_pred ----CCCCCcEEEEEEeccccCCcCCHHHHHHHHHhc-CcCCCEEEEeC
Confidence 24678999999999997 578999998754321 12345555443
No 32
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=98.29 E-value=2.5e-06 Score=84.92 Aligned_cols=96 Identities=14% Similarity=0.057 Sum_probs=73.9
Q ss_pred ceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCC----------CCCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCc
Q 014338 201 TNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP----------ALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGR 270 (426)
Q Consensus 201 ~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p----------~~~~GAddn~SG~a~LLElar~~~~l~~~~~~~p~ 270 (426)
.||+++++|.. .|+|++.||+|+.+..+ -++.|+.|+-.|++++|++++.|.+. ..++
T Consensus 58 ~~~~a~~~~~~-------~~~v~l~~H~D~vp~~~~~~~~~~~g~~~g~G~~D~K~~~a~~l~a~~~l~~~-----~~~~ 125 (369)
T 3tx8_A 58 NNVLARTNRGL-------ASRVMLAGHIDTVPIADNLPSRVEDGIMYGCGTVDMKSGLAVYLHTFATLATS-----TELK 125 (369)
T ss_dssp TEEEEECCCCC-------SCEEEEEEECCBSCCCSCCSCEECSSEEESSSTTTTHHHHHHHHHHHHHHTSC-----TTCC
T ss_pred CcEEEEecCCC-------CCeEEEEcccCccCCCCCCCCeEECCEEEcCCcccchHHHHHHHHHHHHHHhh-----cCCC
Confidence 58999998642 58999999999998631 24578989999999999999999752 2457
Q ss_pred ceEEEEEeCCCCCCC--cchHHHHHhccHhhhcCeeEEEEec
Q 014338 271 YNILFGLTSGGPYNY--NGTHKWLRSFDQRLRESIDYAICLN 310 (426)
Q Consensus 271 ~~I~F~~~~gEe~g~--~GS~~~v~~~~~~~~~~i~~vinlD 310 (426)
.+|.|+++.+||.|. .|++.+++.... .-+..++|+.|
T Consensus 126 ~~v~~~~~~~EE~g~~~~G~~~~~~~~~~--~~~~~~~i~~e 165 (369)
T 3tx8_A 126 HDLTLIAYECEEVADHLNGLGHIRDEHPE--WLAADLALLGE 165 (369)
T ss_dssp SEEEEEEECCCSSCTTSCHHHHHHHHCGG--GGCCSEEEECC
T ss_pred ccEEEEEEeccccCcccccHHHHHHhccc--ccCCCEEEEeC
Confidence 899999999999987 799999987521 12344555544
No 33
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=98.29 E-value=3.3e-06 Score=85.96 Aligned_cols=94 Identities=14% Similarity=0.183 Sum_probs=69.3
Q ss_pred cceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCC-----------CCCCCCCCchhHHHHHHHHHHHHHhccCCCCCC
Q 014338 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP-----------ALSVGSDSNGSGVVALLEVARLFSLLYSNPKTR 268 (426)
Q Consensus 200 ~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p-----------~~~~GAddn~SG~a~LLElar~~~~l~~~~~~~ 268 (426)
..||+++++|.+ + |.|++.||+|+.+... +.-.|.+.+ .|++++|++++.|.+.. ..
T Consensus 71 ~~~l~a~~~~~~------~-~~i~l~aH~D~vp~~~~~~~pf~~~~~g~~~g~G~d-~~~a~~l~a~~~l~~~~----~~ 138 (418)
T 1xmb_A 71 ITGVIGYIGTGE------P-PFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHD-GHVTMLLGAAKILHEHR----HH 138 (418)
T ss_dssp TTEEEEEEESSS------S-CEEEEEEECCCBSCCCCCCSTTCCSSTTCBCCSSHH-HHHHHHHHHHHHHHHTG----GG
T ss_pred CcEEEEEEcCCC------C-CEEEEEecccccCCCCCCCCCcccCCCCceEeCCch-HHHHHHHHHHHHHHhcc----cc
Confidence 468999998743 3 8999999999997631 222233333 69999999999998764 23
Q ss_pred CcceEEEEEeCCCCCCCcchHHHHHhccHhhhcCeeEEEEe
Q 014338 269 GRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICL 309 (426)
Q Consensus 269 p~~~I~F~~~~gEe~g~~GS~~~v~~~~~~~~~~i~~vinl 309 (426)
++.+|.|+++.+|| |..|+++++++.. .+++.+++.+
T Consensus 139 ~~~~v~~~~~~~EE-g~~G~~~~~~~g~---~~~~d~~i~~ 175 (418)
T 1xmb_A 139 LQGTVVLIFQPAEE-GLSGAKKMREEGA---LKNVEAIFGI 175 (418)
T ss_dssp CSSEEEEEEECCTT-TTCHHHHHHHTTT---TTTEEEEEEE
T ss_pred CCceEEEEEecccc-ccccHHHHHHcCC---cCCCCEEEEE
Confidence 57899999999999 9999999998631 2234555553
No 34
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=98.28 E-value=2.6e-06 Score=88.19 Aligned_cols=99 Identities=13% Similarity=0.097 Sum_probs=79.7
Q ss_pred cceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCC--------C---------CCCCCCCCchhHHHHHHHHHHHHHhcc
Q 014338 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAA--------P---------ALSVGSDSNGSGVVALLEVARLFSLLY 262 (426)
Q Consensus 200 ~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~--------p---------~~~~GAddn~SG~a~LLElar~~~~l~ 262 (426)
..||+|+++| . ..|+|++.+|+|+.+.. | -++.|+.|+-.|++++|.+++.|.+..
T Consensus 77 ~~~v~a~~~g-~------~~~~i~l~~H~D~vp~~~~w~~~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~~ 149 (472)
T 3pfe_A 77 TPLLFMEIPG-Q------IDDTVLLYGHLDKQPEMSGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQG 149 (472)
T ss_dssp CCEEEEEECC-S------EEEEEEEEEECCBCCCCSCCCTTCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHTT
T ss_pred CcEEEEEEcC-C------CCCeEEEEccccCCCCcCCCCcCCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHcC
Confidence 4699999988 3 25899999999988752 1 135788899999999999999998764
Q ss_pred CCCCCCCcceEEEEEeCCCCCCCcchHHHHHhccHhhhcCeeEEEEecc
Q 014338 263 SNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNS 311 (426)
Q Consensus 263 ~~~~~~p~~~I~F~~~~gEe~g~~GS~~~v~~~~~~~~~~i~~vinlD~ 311 (426)
..++ +|.|++..+||.|..|++.++++... .++++.+++++|.
T Consensus 150 ----~~~~-~v~~~~~~~EE~g~~g~~~~~~~~~~-~~~~~d~~~~~~~ 192 (472)
T 3pfe_A 150 ----LPYP-RCILIIEACEESGSYDLPFYIELLKE-RIGKPSLVICLDS 192 (472)
T ss_dssp ----CCCE-EEEEEEESCGGGTSTTHHHHHHHHHH-HHCCCSEEEEECC
T ss_pred ----CCCC-cEEEEEEeCCCCCChhHHHHHHHhHh-hccCCCEEEEeCC
Confidence 2345 99999999999999999999987532 2457889999984
No 35
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=98.28 E-value=1.3e-06 Score=87.20 Aligned_cols=84 Identities=21% Similarity=0.220 Sum_probs=67.3
Q ss_pred cceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCCC----------CCCCC----CCchhHHHHHHHHHHHHHhccCCC
Q 014338 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAPA----------LSVGS----DSNGSGVVALLEVARLFSLLYSNP 265 (426)
Q Consensus 200 ~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p~----------~~~GA----ddn~SG~a~LLElar~~~~l~~~~ 265 (426)
..||+|+++|.+. +.|+|++.||+|+.+..+. +..|+ .|+..|++++|++++.|.+..
T Consensus 56 ~~nv~a~~~g~~~-----~~~~v~l~aH~D~vp~~~~~~p~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~--- 127 (373)
T 3gb0_A 56 AGNLICTLPATKD-----GVDTIYFTSHMDTVVPGNGIKPSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKN--- 127 (373)
T ss_dssp SCCEEEEECCSST-----TCCCEEEEEECCBCSSCSSCCCEEETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHTT---
T ss_pred ceeEEEEecCCCC-----CCCEEEEEEECcccCCCCCcCcEEECCEEECCCccccCcccHHHHHHHHHHHHHHHhcC---
Confidence 4799999998631 3689999999999964211 23465 388899999999999998753
Q ss_pred CCCCcceEEEEEeCCCCCCCcchHHHHH
Q 014338 266 KTRGRYNILFGLTSGGPYNYNGTHKWLR 293 (426)
Q Consensus 266 ~~~p~~~I~F~~~~gEe~g~~GS~~~v~ 293 (426)
.++.+|.|+++.+||.|..|++.+..
T Consensus 128 --~~~~~v~~~~~~~EE~g~~Ga~~~~~ 153 (373)
T 3gb0_A 128 --IPHGTIEFIITVGEESGLVGAKALDR 153 (373)
T ss_dssp --CCCCCEEEEEESCGGGTSHHHHHSCG
T ss_pred --CCCCCEEEEEEeccccCchhhhhhCH
Confidence 24689999999999999999998854
No 36
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=98.23 E-value=5.7e-06 Score=82.14 Aligned_cols=84 Identities=17% Similarity=0.164 Sum_probs=67.5
Q ss_pred cceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCC-----------------CCCCCCCCchhHHHHHHHHHHHHHhcc
Q 014338 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP-----------------ALSVGSDSNGSGVVALLEVARLFSLLY 262 (426)
Q Consensus 200 ~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p-----------------~~~~GAddn~SG~a~LLElar~~~~l~ 262 (426)
..|++|++ |.+ .|+|++.||+|+.+..+ -++.|+.|+-.|++++|+.++.|.+..
T Consensus 48 ~~n~~a~~-g~~-------~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~ 119 (377)
T 3isz_A 48 TLNLWAKH-GTS-------EPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKAN 119 (377)
T ss_dssp BCEEEEEE-ESS-------SCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHC
T ss_pred CceEEEEe-CCC-------CCEEEEeccccccCCCCcccCCCCCCCcEEECCEEEeCChhhhhHHHHHHHHHHHHHHHhC
Confidence 57999988 632 68999999999998632 135677799999999999999887754
Q ss_pred CCCCCCCcceEEEEEeCCCCCCC-cchHHHHHhc
Q 014338 263 SNPKTRGRYNILFGLTSGGPYNY-NGTHKWLRSF 295 (426)
Q Consensus 263 ~~~~~~p~~~I~F~~~~gEe~g~-~GS~~~v~~~ 295 (426)
..++.+|.|+++.+||.+. .|++.+++..
T Consensus 120 ----~~~~~~v~~~~~~~EE~~~~~G~~~~~~~~ 149 (377)
T 3isz_A 120 ----PNHKGTIALLITSDEEATAKDGTIHVVETL 149 (377)
T ss_dssp ----TTCSSEEEEEEESCSSSCCSSSHHHHHHHH
T ss_pred ----CCCCceEEEEEEcccccCccccHHHHHHHH
Confidence 2467899999999999876 6999988754
No 37
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=98.21 E-value=1.8e-06 Score=87.78 Aligned_cols=79 Identities=14% Similarity=0.072 Sum_probs=66.6
Q ss_pred ceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCcceEEEEEeCC
Q 014338 201 TNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSG 280 (426)
Q Consensus 201 ~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p~~~~GAddn~SG~a~LLElar~~~~l~~~~~~~p~~~I~F~~~~g 280 (426)
.||+|+++|.++ ..|+|++.+|+|+++. .|..|+..|++++|++++.|.+.. ..++++|.|+++.+
T Consensus 62 gnv~a~~~g~~~-----~~~~i~l~~H~D~Vp~-----~g~~D~k~g~a~~l~a~~~l~~~~----~~~~~~v~~i~~~~ 127 (423)
T 1z2l_A 62 GNLYGRLNGTEY-----PQEVVLSGSHIDTVVN-----GGNLDGQFGALAAWLAIDWLKTQY----GAPLRTVEVVAMAE 127 (423)
T ss_dssp SCEEEEECCSSE-----EEEEEEEEEECCCCTT-----BCSSTTHHHHHHHHHHHHHHHHHH----CSCSEEEEEEEESC
T ss_pred CcEEEEEcCCCC-----CCCEEEEEEecCCCCC-----CCccCCHHHHHHHHHHHHHHHHcC----CCCCCCEEEEEEcC
Confidence 399999987541 2489999999999974 377899999999999999998864 24678999999999
Q ss_pred CCC-----CCcchHHHHH
Q 014338 281 GPY-----NYNGTHKWLR 293 (426)
Q Consensus 281 Ee~-----g~~GS~~~v~ 293 (426)
||. |+.|++.+++
T Consensus 128 EE~~~~~~g~~Gs~~~~~ 145 (423)
T 1z2l_A 128 EEGSRFPYVFWGSKNIFG 145 (423)
T ss_dssp SSCCSSSCSCHHHHHHTT
T ss_pred ccccccCCCcccHHHHHc
Confidence 997 5779999986
No 38
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=98.21 E-value=1.5e-06 Score=88.93 Aligned_cols=98 Identities=12% Similarity=0.146 Sum_probs=73.0
Q ss_pred cceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCCC--C----------------------------------------
Q 014338 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAPA--L---------------------------------------- 237 (426)
Q Consensus 200 ~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p~--~---------------------------------------- 237 (426)
..||+|+++|... +..|+|++.+|+|+.+..+. .
T Consensus 80 ~~nv~a~~~g~~~----~~~~~v~l~~H~DtVp~~~~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~i 155 (434)
T 3ife_A 80 NGYVMATLPANTD----KDVPVIGFLAHLDTATDFTGKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTII 155 (434)
T ss_dssp TSCEEEEECCBSS----SCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCEE
T ss_pred CcEEEEEeCCCCC----CCCCeEEEEEEcccCCCCCCCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcEE
Confidence 4699999998652 13689999999999975211 0
Q ss_pred -CCC----CCCchhHHHHHHHHHHHHHhccCCCCCCCcceEEEEEeCCCCCCCcchHHHHHhccHhhhcCeeEEEEecc
Q 014338 238 -SVG----SDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNS 311 (426)
Q Consensus 238 -~~G----Addn~SG~a~LLElar~~~~l~~~~~~~p~~~I~F~~~~gEe~g~~GS~~~v~~~~~~~~~~i~~vinlD~ 311 (426)
+.| +.|+-.|++++|++++.|.+.. ..++.+|.|+++.+||.| .|++++..+ .+ ++.+++++|.
T Consensus 156 ~grG~t~~~~D~K~gva~~l~a~~~L~~~~----~~~~~~i~~if~~~EE~g-~Ga~~~~~~----~~-~~d~~~~~d~ 224 (434)
T 3ife_A 156 TTDGTTLLGADDKAGLTEIMVAMNYLIHNP----QIKHGKIRVAFTPDEEIG-RGPAHFDVE----AF-GASFAYMMDG 224 (434)
T ss_dssp ECCSSSCCCHHHHHHHHHHHHHHHHHHTCT----TSCBCCEEEEEESCGGGT-CTGGGCCHH----HH-CCSEEEECCC
T ss_pred ECCCccchhhhhHHHHHHHHHHHHHHHhCC----CCCCCCEEEEEECCcccC-hHHHHhhhh----hc-CCCEEEEecC
Confidence 012 4788899999999999998753 346789999999999999 899876432 12 4667777773
No 39
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=98.19 E-value=6.9e-06 Score=83.19 Aligned_cols=83 Identities=17% Similarity=0.166 Sum_probs=64.7
Q ss_pred cceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCC-----------CCCCCCCCchhHHHHHHHHHHHHHhccCCCCCC
Q 014338 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP-----------ALSVGSDSNGSGVVALLEVARLFSLLYSNPKTR 268 (426)
Q Consensus 200 ~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p-----------~~~~GAddn~SG~a~LLElar~~~~l~~~~~~~ 268 (426)
-.||+++++|.+ +.|.|++.+|+|+.+... +.-.|.+.+ .|++++|++++.|.+.. ..
T Consensus 76 ~~nv~a~~~g~~------~~~~i~l~~H~D~vp~~~~~~~Pf~~~~~g~l~g~G~k-g~~a~~l~a~~~l~~~~----~~ 144 (404)
T 1ysj_A 76 KTGVIAEIKGRE------DGPVIAIRADIDALPIQEQTNLPFASKVDGTMHACGHD-FHTASIIGTAMLLNQRR----AE 144 (404)
T ss_dssp SSCEEEEEECSS------CCCEEEEEEECCCBSCCCCCCCTTCCSSTTCBCTTSHH-HHHHHHHHHHHHHHTCG----GG
T ss_pred CceEEEEEeCCC------CCCEEEEEEecccccCCCCCCCCcccCCCCceEcCcCh-HHHHHHHHHHHHHHhcc----cc
Confidence 469999998853 258999999999998631 222233333 58999999999998753 23
Q ss_pred CcceEEEEEeCCCCCCCcchHHHHHh
Q 014338 269 GRYNILFGLTSGGPYNYNGTHKWLRS 294 (426)
Q Consensus 269 p~~~I~F~~~~gEe~g~~GS~~~v~~ 294 (426)
++.+|.|+++.+||. ..|+++++++
T Consensus 145 ~~~~v~~~~~~~EE~-~~G~~~~~~~ 169 (404)
T 1ysj_A 145 LKGTVRFIFQPAEEI-AAGARKVLEA 169 (404)
T ss_dssp CSSEEEEEEESCTTT-TCHHHHHHHT
T ss_pred CCceEEEEEeccccc-chhHHHHHhc
Confidence 578999999999998 7899999985
No 40
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=98.17 E-value=1.6e-06 Score=86.74 Aligned_cols=97 Identities=16% Similarity=0.118 Sum_probs=74.1
Q ss_pred ceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCC----C-----CC--CCCCCCCchhHHHHHHHHHHHHHhccCCCCCCC
Q 014338 201 TNIQGWLQGLKADGDANQLPTIAIVASYDTFGA----A-----PA--LSVGSDSNGSGVVALLEVARLFSLLYSNPKTRG 269 (426)
Q Consensus 201 ~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~----~-----p~--~~~GAddn~SG~a~LLElar~~~~l~~~~~~~p 269 (426)
.|+++.++|... ...|+|++.+|+|+.+. + ++ ++.|+.|+.+|++++|++++.|.+... ++
T Consensus 51 ~~~~~~~~~~~~----~~~~~i~l~aH~D~vp~~~~p~~~~~~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~~----~~ 122 (364)
T 2rb7_A 51 HDGIPSVMVLPE----KGRAGLLLMAHIDVVDAEDDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNALK----AA 122 (364)
T ss_dssp ETTEEEEEECSB----TTEEEEEEEEECCCCCCCGGGGSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHHH----HT
T ss_pred CCCceEEEEEcC----CCCCeEEEECccCcCCCCCCCCccEEECCEEEecccccccHHHHHHHHHHHHHHHhCC----CC
Confidence 578888886421 13689999999999975 1 22 467899999999999999999987531 23
Q ss_pred ---cce--EEEEEeCCCCC-CCcchHHHHHhccHhhhcCeeEEEEecc
Q 014338 270 ---RYN--ILFGLTSGGPY-NYNGTHKWLRSFDQRLRESIDYAICLNS 311 (426)
Q Consensus 270 ---~~~--I~F~~~~gEe~-g~~GS~~~v~~~~~~~~~~i~~vinlD~ 311 (426)
+.+ |.|+++.+||. |..|++.++++. +..++|++|.
T Consensus 123 ~~~~g~~~v~~~~~~~EE~~g~~G~~~~~~~~------~~d~~i~~d~ 164 (364)
T 2rb7_A 123 GRSQKDMALGLLITGDEEIGGMNGAAKALPLI------RADYVVALDG 164 (364)
T ss_dssp TCCGGGCCEEEEEESCGGGTSTTTHHHHGGGC------EEEEEEECSS
T ss_pred cccCCCccEEEEEEeccccCchhhHHHHHhcC------CCCEEEEccC
Confidence 457 99999999996 789999998764 3557777663
No 41
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=98.17 E-value=3.5e-06 Score=87.32 Aligned_cols=78 Identities=23% Similarity=0.167 Sum_probs=65.3
Q ss_pred ceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCcceEEEEEeCC
Q 014338 201 TNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSG 280 (426)
Q Consensus 201 ~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p~~~~GAddn~SG~a~LLElar~~~~l~~~~~~~p~~~I~F~~~~g 280 (426)
.||+|+++|.+ +.++|++.+|+|+.+.. |.-|+..|++++|++++.|.+.. .+++++|.|+++.+
T Consensus 93 gnvia~~~g~~------~~~~i~l~~H~DtVp~~-----g~~D~k~gvaa~L~a~~~L~~~~----~~~~~~v~lif~~d 157 (474)
T 2v8h_A 93 GNMFAVYPGKN------GGKPTATGSHLDTQPEA-----GKYDGILGVLAGLEVLRTFKDNN----YVPNYDVCVVVWFN 157 (474)
T ss_dssp CCEEEEECCSS------CCSCEEEEECCCCCSSB-----CSSTTHHHHHHHHHHHHHHHHHT----CCCSSCEEEEECTT
T ss_pred ceEEEEECCCC------CCCeEEEEEecccCCCC-----CCcCCHHHHHHHHHHHHHHHHcC----CCCCCCEEEEEECC
Confidence 48999998854 24589999999999753 34588999999999999998864 34678999999999
Q ss_pred CCC-----CCcchHHHHH
Q 014338 281 GPY-----NYNGTHKWLR 293 (426)
Q Consensus 281 Ee~-----g~~GS~~~v~ 293 (426)
||. |+.||+.+++
T Consensus 158 EE~~~~~~g~~Gs~~l~~ 175 (474)
T 2v8h_A 158 AEGARFARSCTGSSVWSH 175 (474)
T ss_dssp CSCSSSSCTTHHHHHHTT
T ss_pred ccCCCCCCCcccHHHHHh
Confidence 998 7889999975
No 42
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=98.16 E-value=4.6e-06 Score=86.96 Aligned_cols=84 Identities=12% Similarity=0.190 Sum_probs=68.4
Q ss_pred eEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCC---------------CCCCCCCCchhHHHHHHHHHHHHHhccCCCC
Q 014338 202 NIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP---------------ALSVGSDSNGSGVVALLEVARLFSLLYSNPK 266 (426)
Q Consensus 202 NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p---------------~~~~GAddn~SG~a~LLElar~~~~l~~~~~ 266 (426)
|+++.+++-. ..|+|++.+|+|+.+..+ -+..|+.|+-.|++++|.+++.|.+..
T Consensus 88 ~~~~~~~~g~------~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~g~l~GrG~~D~Kg~~a~~l~a~~~l~~~~---- 157 (492)
T 3khx_A 88 HIAGRIEAGK------GNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMN---- 157 (492)
T ss_dssp TTEEEEEEEC------SSCEEEEEEECCCCCCCSCCSSCTTSCEECSSEEESTTTTTTHHHHHHHHHHHHHHHHTT----
T ss_pred CEEEEEEeCC------CCCEEEEEEeccCCCCCCCcccCCCceEEECCEEEecCCccCcHHHHHHHHHHHHHHHcC----
Confidence 6677775311 268999999999987632 134699999999999999999998763
Q ss_pred CCCcceEEEEEeCCCCCCCcchHHHHHhc
Q 014338 267 TRGRYNILFGLTSGGPYNYNGTHKWLRSF 295 (426)
Q Consensus 267 ~~p~~~I~F~~~~gEe~g~~GS~~~v~~~ 295 (426)
..++.+|.|++..+||.|..|+++++++.
T Consensus 158 ~~~~~~i~~~~~~~EE~g~~g~~~~~~~~ 186 (492)
T 3khx_A 158 VDWKKRIHMIIGTDEESDWKCTDRYFKTE 186 (492)
T ss_dssp CCCSSEEEEEEECCTTCCCCTTSHHHHHS
T ss_pred CCCCCCEEEEEECCccCCCcCHHHHHHhC
Confidence 34678999999999999999999999975
No 43
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=98.15 E-value=4.3e-05 Score=75.57 Aligned_cols=152 Identities=11% Similarity=0.052 Sum_probs=95.6
Q ss_pred CCCchhHHHHHHHHHHHHHhccCCCCCCCcceEEEEEeCCCCCCCcchHHHHHhccHhhhcCeeEEEEeccccCCC--C-
Q 014338 241 SDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWN--N- 317 (426)
Q Consensus 241 Addn~SG~a~LLElar~~~~l~~~~~~~p~~~I~F~~~~gEe~g~~GS~~~v~~~~~~~~~~i~~vinlD~iG~~~--~- 317 (426)
+-||-.|+++++++++.+.+.. ++.++.|+++..||.|..|++...... +-.++|.+|+....+ +
T Consensus 170 ~~D~r~g~aa~l~al~~l~~~~------~~~~~~~~~t~~EEvG~~Ga~~~~~~i------~~~~~i~~D~~~~~~~~~~ 237 (346)
T 1vho_A 170 ALDNRASCGVLVKVLEFLKRYD------HPWDVYVVFSVQEETGCLGALTGAYEI------NPDAAIVMDVTFASEPPFS 237 (346)
T ss_dssp THHHHHHHHHHHHHHHHHTTCC------CSSEEEEEEECTTSSSHHHHHHTTCCC------CCSEEEEEEEECCCCTTSC
T ss_pred cCccHHHHHHHHHHHHHhhhcC------CCceEEEEEECCcccchhhHHHHhccc------CCCEEEEeecccccCCCCC
Confidence 4578899999999999986431 357899999999999999988643321 123556777654321 0
Q ss_pred -------ceeEEecCCCcchHHHHHHHHHHHHHHHhCceeccccccccCCCCC-CCcchhhh--hcCCCeEEEEeecCCC
Q 014338 318 -------ELWIHVSKPPENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPR-VAWEHEQF--SRLRVTAATLSELSAA 387 (426)
Q Consensus 318 -------~l~~hvs~~p~~~~~~~~~~~l~~~a~~~~~~~~~~~~ki~~~~~~-~~~dHe~F--~~~gIPa~tls~~~~~ 387 (426)
...+.+ ..+.+ ..+.+.+.+++++.|++.+..... . -.+|...| +..|+|++.+.-- .
T Consensus 238 ~~~~~~~g~~i~~-~~~~~---~~l~~~~~~~a~~~gi~~~~~~~~------g~ggsDa~~~~~~~~gipt~~lg~~-~- 305 (346)
T 1vho_A 238 DHIELGKGPVIGL-GPVVD---RNLVQKIIEIAKKHNVSLQEEAVG------GRSGTETDFVQLVRNGVRTSLISIP-L- 305 (346)
T ss_dssp CCCCTTSCCEEEC-STTSC---HHHHHHHHHHHHHTTCCCEEESSC------CC----CTTHHHHHTTCEEEEEEEE-C-
T ss_pred cccccCCCceEEe-CCcCC---HHHHHHHHHHHHHCCCCEEEEeCC------CCCCchHHHHHHhCCCCcEEEEehh-h-
Confidence 001111 11122 356666777788777766542110 1 24566677 4579999988653 2
Q ss_pred CCccccCCCCCCCcCCCCHHHHHHHHHHHHHHHHHH
Q 014338 388 PELLESTGGLLDSRHFVDETSFIRSVKLVAESLAVS 423 (426)
Q Consensus 388 ~~~~~~~~s~~Dt~d~ld~~~L~~~~~~iae~la~~ 423 (426)
+ ..|++. |.++.+.+.+.++++.+.+.++
T Consensus 306 ~----~~Hs~~---E~~~~~dl~~~~~ll~~~~~~~ 334 (346)
T 1vho_A 306 K----YMHTPV---EMVDPRDVEELARLLSLVAVEL 334 (346)
T ss_dssp B----STTSTT---EEECHHHHHHHHHHHHHHHHHC
T ss_pred c----ccccHH---HhcCHHHHHHHHHHHHHHHHHh
Confidence 1 134554 6788999999999988877653
No 44
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=98.10 E-value=4.2e-06 Score=84.38 Aligned_cols=88 Identities=19% Similarity=0.231 Sum_probs=67.4
Q ss_pred CcceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCC---------C--CCCCC----CCchhHHHHHHHHHHHHHhccC
Q 014338 199 TITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP---------A--LSVGS----DSNGSGVVALLEVARLFSLLYS 263 (426)
Q Consensus 199 ~~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p---------~--~~~GA----ddn~SG~a~LLElar~~~~l~~ 263 (426)
...||+|+++|... ..+.|+|++.||+|+.+... + ++.|+ .|+..|++++|++++.|.+..
T Consensus 73 ~~~nvia~~~g~~~---~~~~~~i~l~aH~D~vp~g~~~~p~~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~- 148 (396)
T 3rza_A 73 GANNLVCTMNSTIE---EGEVPKLYLTSHMDTVVPAINVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQ- 148 (396)
T ss_dssp SSCCEEEEECCCCC------CCCEEEEEECCBCSSCSSCCCEECTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred CCceEEEEECCcCC---CCCCCeEEEEEECCccCCCCCcceEEecCCEEECCCccccCcccHHHHHHHHHHHHHHHhcC-
Confidence 35799999998610 01368999999999995421 1 34455 378899999999999998763
Q ss_pred CCCCCCcceEEEEEeCCCCCCCcchHHHHHh
Q 014338 264 NPKTRGRYNILFGLTSGGPYNYNGTHKWLRS 294 (426)
Q Consensus 264 ~~~~~p~~~I~F~~~~gEe~g~~GS~~~v~~ 294 (426)
.++.+|.|+++.+||.|..|++.++++
T Consensus 149 ----~~~~~v~~~~~~~EE~g~~Ga~~~~~~ 175 (396)
T 3rza_A 149 ----IPHGQIQFVITVGEESGLIGAKELNSE 175 (396)
T ss_dssp ----CCCCCEEEEEESCGGGTSHHHHHCCGG
T ss_pred ----CCCCCEEEEEEcccccccHhHhhhchh
Confidence 246799999999999999999988653
No 45
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=98.08 E-value=1.2e-05 Score=82.67 Aligned_cols=82 Identities=16% Similarity=0.095 Sum_probs=67.3
Q ss_pred eEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCC-C---------------CCCCCCCchhHHHHHHHHHHHHHhccCCC
Q 014338 202 NIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP-A---------------LSVGSDSNGSGVVALLEVARLFSLLYSNP 265 (426)
Q Consensus 202 NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p-~---------------~~~GAddn~SG~a~LLElar~~~~l~~~~ 265 (426)
++++.+ |.+ .|+|++.+|+|+.+..+ | ++.|+.|+..|++++|++++.|.+..
T Consensus 70 ~~~~~~-g~~-------~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~l~~~~--- 138 (470)
T 1lfw_A 70 AGRVNF-GAG-------DKRLGIIGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLLKEAG--- 138 (470)
T ss_dssp EEEEEE-CCC-------SSEEEEEEECCBCCCCSCCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHHHHHT---
T ss_pred EEEEEe-CCC-------CCeEEEEEeecccCCCCCccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHHHHHcC---
Confidence 566666 532 57999999999987632 1 46788999999999999999998764
Q ss_pred CCCCcceEEEEEeCCCCCCCcchHHHHHhc
Q 014338 266 KTRGRYNILFGLTSGGPYNYNGTHKWLRSF 295 (426)
Q Consensus 266 ~~~p~~~I~F~~~~gEe~g~~GS~~~v~~~ 295 (426)
..++.+|.|+++.+||.|..|+++++++.
T Consensus 139 -~~~~~~i~~i~~~~EE~g~~G~~~~~~~~ 167 (470)
T 1lfw_A 139 -FKPKKKIDFVLGTNEETNWVGIDYYLKHE 167 (470)
T ss_dssp -CCCSSEEEEEEESCTTTTCHHHHHHHHHS
T ss_pred -CCCCCCEEEEEecCcccCCccHHHHHHhC
Confidence 34678999999999999999999999863
No 46
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=98.07 E-value=7.8e-06 Score=81.61 Aligned_cols=86 Identities=16% Similarity=0.180 Sum_probs=69.3
Q ss_pred cceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCC-C--------------CCCCCCCchhHHHHHHHHHHHHHhccCC
Q 014338 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP-A--------------LSVGSDSNGSGVVALLEVARLFSLLYSN 264 (426)
Q Consensus 200 ~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p-~--------------~~~GAddn~SG~a~LLElar~~~~l~~~ 264 (426)
..|+++ ++|. |.|++.+|+|+.+..+ | ++.|+.|+..|++++|++++.
T Consensus 58 ~~~~~a-~~g~---------~~i~l~~H~D~vp~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~------- 120 (369)
T 2f7v_A 58 AVSLYA-VRGT---------PKYLFNVHLDTVPDSPHWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANA------- 120 (369)
T ss_dssp CEEEEE-EESC---------CSEEEEEECCBCCCCSSCSSCTTSCEECSSEEECTTTTTTHHHHHHHHHHHTT-------
T ss_pred ceEEEE-EcCC---------CeEEEEeeecccCCCCCCCCCCCCcEEECCEEEecccccccHHHHHHHHHHhc-------
Confidence 479999 8762 5799999999987632 1 356889999999999999876
Q ss_pred CCCCCcceEEEEEeCCCCC-CCcchHHHHHhccHhhhcCeeEEEEecc
Q 014338 265 PKTRGRYNILFGLTSGGPY-NYNGTHKWLRSFDQRLRESIDYAICLNS 311 (426)
Q Consensus 265 ~~~~p~~~I~F~~~~gEe~-g~~GS~~~v~~~~~~~~~~i~~vinlD~ 311 (426)
++.+|.|+++.+||. |..|+++++++.. +..++|++|.
T Consensus 121 ----~~~~v~~~~~~~EE~~g~~G~~~~~~~~~-----~~d~~i~~e~ 159 (369)
T 2f7v_A 121 ----GDGDAAFLFSSDEEANDPRCIAAFLARGL-----PYDAVLVAEP 159 (369)
T ss_dssp ----CCCCEEEEEESCTTSSSCCHHHHHHTTCC-----CCSEEEECCC
T ss_pred ----CCCCEEEEEEeCcccCCCcCHHHHHhcCC-----CCCEEEECCC
Confidence 257899999999999 8999999998742 4566777765
No 47
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=98.02 E-value=2.1e-05 Score=77.51 Aligned_cols=150 Identities=11% Similarity=0.009 Sum_probs=96.9
Q ss_pred CCCchhHHHHHHHHHHHHHhccCCCCCCCcceEEEEEeCCCCCCCcchHHHHHhccHhhhcCeeEEEEeccccCCC----
Q 014338 241 SDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWN---- 316 (426)
Q Consensus 241 Addn~SG~a~LLElar~~~~l~~~~~~~p~~~I~F~~~~gEe~g~~GS~~~v~~~~~~~~~~i~~vinlD~iG~~~---- 316 (426)
+-||-.|++++|++++.+. + +.|+++..||.|..|++....-... .-+..++|++|+....+
T Consensus 163 ~~D~k~G~aa~l~al~~l~---------~---i~~~~t~~EEvG~~Ga~~a~~~~~~--~~~~~~~i~~D~~~~~~~~~~ 228 (321)
T 3cpx_A 163 YLDDRLGVWTALELAKTLE---------H---GIIAFTCWEEHGGGSVAYLARWIYE--TFHVKQSLICDITWVTEGVEA 228 (321)
T ss_dssp THHHHHHHHHHHHHTTTCC---------S---EEEEEESSTTTTCCSHHHHHHHHHH--HHCCCEEEECCCEECCSSSCT
T ss_pred CCcCHHHHHHHHHHHHHhc---------C---cEEEEECCccCchhcchhhhhcccc--ccCCCEEEEEeCccccCCccc
Confidence 5789999999999988642 1 8899999999999999864320000 12346788888865431
Q ss_pred -CceeEEe-cCCCcchHHHHHHHHHHHHHHHhCceeccccccccCCCCCCCcchhhh--hcCCCeEEEEeecCCCCCccc
Q 014338 317 -NELWIHV-SKPPENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQF--SRLRVTAATLSELSAAPELLE 392 (426)
Q Consensus 317 -~~l~~hv-s~~p~~~~~~~~~~~l~~~a~~~~~~~~~~~~ki~~~~~~~~~dHe~F--~~~gIPa~tls~~~~~~~~~~ 392 (426)
...-+.+ ..++.+ ..+++.+++++++.|++++.... ....+|--.+ +..|||++.+.--. +
T Consensus 229 ~~G~~i~~~~~~~~~---~~l~~~~~~~a~~~gi~~q~~~~------~~GGsD~~~~~~s~~Gipt~~lG~~~------~ 293 (321)
T 3cpx_A 229 GKGVAISMRDRMIPR---KKYVNRIIELARQTDIPFQLEVE------GAGASDGRELQLSPYPWDWCFIGAPE------K 293 (321)
T ss_dssp TSCEEEEEESSSCCC---HHHHHHHHHHHTTSSCCEEEEEC------SSCCCHHHHHHHSSSCCBCCBEECEE------B
T ss_pred CCCcEEEECCCCCCC---HHHHHHHHHHHHHcCCCEEEEeC------CCCCccHHHHHHhCCCCCEEEEchhh------c
Confidence 1111111 133333 35667777778877877765211 1224565566 66899999776421 1
Q ss_pred cCCCCCCCcCCCCHHHHHHHHHHHHHHHHH
Q 014338 393 STGGLLDSRHFVDETSFIRSVKLVAESLAV 422 (426)
Q Consensus 393 ~~~s~~Dt~d~ld~~~L~~~~~~iae~la~ 422 (426)
..||+. |.++.+.+...++++++.+.+
T Consensus 294 ~~Hs~~---E~~~~~dl~~~~~ll~~~~~~ 320 (321)
T 3cpx_A 294 DAHTPN---ECVHKKDIESMVGLYKYLMEK 320 (321)
T ss_dssp STTSTT---CEEEHHHHHHHHHHHHHHHHH
T ss_pred ccchhh---hheeHHHHHHHHHHHHHHHHh
Confidence 235554 678899999999998887653
No 48
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=97.96 E-value=8e-06 Score=82.83 Aligned_cols=97 Identities=12% Similarity=0.152 Sum_probs=70.4
Q ss_pred cceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCC-C-C--------C-------------------------------
Q 014338 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP-A-L--------S------------------------------- 238 (426)
Q Consensus 200 ~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p-~-~--------~------------------------------- 238 (426)
..||+++++|.+. .+.|.|++.||+|+.+..+ + . .
T Consensus 55 ~~nvia~~~g~~~----~~~~~i~l~aH~D~Vp~~~~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~l~ 130 (417)
T 1fno_A 55 KGTLMATLPANVE----GDIPAIGFISHVDTSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLIT 130 (417)
T ss_dssp TCCEEEEECCSSC----SCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEEE
T ss_pred CceEEEEECCCCC----CCCCceEEEEeccccCCCCCCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcEEE
Confidence 3599999987531 1257999999999997632 0 0 0
Q ss_pred -CCC----CCchhHHHHHHHHHHHHHhccCCCCCCCcceEEEEEeCCCCCCCcchHHHHHhccHhhhcCeeEEEEecc
Q 014338 239 -VGS----DSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNS 311 (426)
Q Consensus 239 -~GA----ddn~SG~a~LLElar~~~~l~~~~~~~p~~~I~F~~~~gEe~g~~GS~~~v~~~~~~~~~~i~~vinlD~ 311 (426)
-|+ .|+..|++++|++++.|.+.. .++.+|.|+++.+||.| .|+++++++. . +..+++++|.
T Consensus 131 grGat~l~~D~K~g~a~~l~a~~~l~~~~-----~~~~~v~~~~~~~EE~g-~Ga~~~~~~~----~-~~d~~i~~d~ 197 (417)
T 1fno_A 131 TDGKTLLGADDKAGVAEIMTALAVLKGNP-----IPHGDIKVAFTPDEEVG-KGAKHFDVEA----F-GAQWAYTVDG 197 (417)
T ss_dssp CCSSSCCCHHHHHHHHHHHHHHHHHHSSS-----CCCCCEEEEEESCGGGT-CTTTTCCHHH----H-CCSEEEECCC
T ss_pred cCCccccccccHHhHHHHHHHHHHHHhCC-----CCCCcEEEEEEeccccC-CChhhhchhh----c-CCCEEEEeCC
Confidence 132 667789999999999998752 35789999999999999 8998776431 1 3455666664
No 49
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=97.90 E-value=2.3e-05 Score=79.29 Aligned_cols=93 Identities=15% Similarity=0.108 Sum_probs=66.3
Q ss_pred cceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCcceEEEEEeC
Q 014338 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTS 279 (426)
Q Consensus 200 ~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p~~~~GAddn~SG~a~LLElar~~~~l~~~~~~~p~~~I~F~~~~ 279 (426)
-.||+|+++|.. +.|+|++.+|+|+.+. ...+.+.++-| +++|.+|+.|.+... .++.+|.|+++.
T Consensus 61 ~~~via~~~g~~------~g~~i~l~ah~D~vpg---~~ha~G~d~~~-a~~l~aa~~L~~~~~----~~~g~v~~~f~~ 126 (394)
T 3ram_A 61 ATGFIATYDSGL------DGPAIGFLAEYDALPG---LGHACGHNIIG-TASVLGAIGLKQVID----QIGGKVVVLGCP 126 (394)
T ss_dssp EEEEEEEEECSS------SSCEEEEEECCCCCTT---TSSTTCHHHHH-HHHHHHHHHHHTTHH----HHCSEEEEEECC
T ss_pred ceEEEEEEeCCC------CCCEEEEEEecccCCC---cceECCccHHH-HHHHHHHHHHHHhHh----hCCceEEEEEEC
Confidence 469999998854 3689999999999962 23344445544 567888888886531 357899999999
Q ss_pred CCCCC-CcchH-HHHHhccHhhhcCeeEEEEe
Q 014338 280 GGPYN-YNGTH-KWLRSFDQRLRESIDYAICL 309 (426)
Q Consensus 280 gEe~g-~~GS~-~~v~~~~~~~~~~i~~vinl 309 (426)
+||.| ..|++ .+++.- ..+++.++|.+
T Consensus 127 ~EE~~~~~Ga~~~~~~~g---~~~~~d~~~~~ 155 (394)
T 3ram_A 127 AEEGGENGSAKASYVKAG---VIDQIDIALMI 155 (394)
T ss_dssp CTTCCTTCCHHHHHHHHT---GGGGCSEEECC
T ss_pred CccCCCCCchHHHHHHcC---CcccCCEEEEE
Confidence 99998 58999 777752 12334455443
No 50
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=97.89 E-value=5.2e-05 Score=77.85 Aligned_cols=95 Identities=12% Similarity=0.132 Sum_probs=67.0
Q ss_pred cceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCC------------------CCCCCCCCchhHHHHHHHHHHHHHhc
Q 014338 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP------------------ALSVGSDSNGSGVVALLEVARLFSLL 261 (426)
Q Consensus 200 ~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p------------------~~~~GAddn~SG~a~LLElar~~~~l 261 (426)
..||+|+++|.. +.|+|++.||+|+.+... +...|.+-+ .+++++|.+++.|.+.
T Consensus 96 ~~~vva~~~~~~------~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd-~~~a~~l~aa~~L~~~ 168 (445)
T 3io1_A 96 FAGVVATLDTGR------PGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHD-GHTAIGLGLAHVLKQY 168 (445)
T ss_dssp CCCEEEEEECSS------CCCEEEEEEECCCCCC-------------------------CTTC-THHHHHHHHHHHHHHT
T ss_pred CCEEEEEEeCCC------CCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCch-HHHHHHHHHHHHHHhC
Confidence 479999998854 368999999999998621 111122222 3699999999999876
Q ss_pred cCCCCCCCcceEEEEEeCCCCCCCcchHHHHHhccHhhhcCeeEEEEe
Q 014338 262 YSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICL 309 (426)
Q Consensus 262 ~~~~~~~p~~~I~F~~~~gEe~g~~GS~~~v~~~~~~~~~~i~~vinl 309 (426)
. ..++.+|.|+++.+|| +..|++.++++- ..+++.+++.+
T Consensus 169 ~----~~~~g~v~l~f~p~EE-~~~Ga~~~i~~g---~~~~~d~~~~~ 208 (445)
T 3io1_A 169 A----AQLNGVIKLIFQPAEE-GTRGARAMVAAG---VVDDVDYFTAI 208 (445)
T ss_dssp G----GGCCSEEEEEEESCTT-TTCHHHHHHHTT---TTTTCSEEEEE
T ss_pred c----CcCCceEEEEEecccc-ccchHHHHHHcC---CccccceeEEE
Confidence 4 2467899999999999 668999999862 12344555444
No 51
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=97.87 E-value=1.4e-05 Score=83.34 Aligned_cols=94 Identities=15% Similarity=0.059 Sum_probs=69.8
Q ss_pred ceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCC--------------------CCCCCCC---CchhHHHHHHHHHHH
Q 014338 201 TNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAP--------------------ALSVGSD---SNGSGVVALLEVARL 257 (426)
Q Consensus 201 ~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p--------------------~~~~GAd---dn~SG~a~LLElar~ 257 (426)
.||+++++|... .+..|+|++.||+|+.+..+ -++.|+. |+..|++++|++++
T Consensus 57 ~nv~a~~~g~~g---~~~~~~v~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~~g~l~g~G~~lgaD~k~g~a~~l~~l~- 132 (490)
T 3mru_A 57 GNVFIKKPATPG---MENKKGVVLQAHIDMVPQKNEDTDHDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVLA- 132 (490)
T ss_dssp CCEEEEECCCTT---CTTCCCEEEEEECCBCCCBCTTSCCCTTTCCCCEEEETTEEEETTBCCCHHHHTTHHHHHHHHH-
T ss_pred CeEEEEEcCCCC---CCCCCeEEEEeccCCCCCCCCCcccccccCCceEEeeCCeEecCCCccCCCCHHHHHHHHHHHH-
Confidence 499999998631 02478999999999997631 1245776 89999999998753
Q ss_pred HHhccCCCCCCCcceEEEEEeCCCCCCCcchHHHHHhccHhhhcCeeEEEEec
Q 014338 258 FSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLN 310 (426)
Q Consensus 258 ~~~l~~~~~~~p~~~I~F~~~~gEe~g~~GS~~~v~~~~~~~~~~i~~vinlD 310 (426)
.. ..++.+|.|+++.+||.|..|+++++++. + +..+++++|
T Consensus 133 --~~-----~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~----~-~~~~~~~~d 173 (490)
T 3mru_A 133 --SK-----EIKHGPIEVLLTIDEEAGMTGAFGLEAGW----L-KGDILLNTD 173 (490)
T ss_dssp --CS-----SCCCCSEEEEEESCSSSTTGGGGTCCSSS----C-CSSEEEECC
T ss_pred --hC-----CCCCCCEEEEEEcccccccHhHHHhhhcc----c-CCCEEEEcC
Confidence 11 23567899999999999999999987642 1 345667776
No 52
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=97.78 E-value=2.2e-05 Score=81.43 Aligned_cols=83 Identities=16% Similarity=0.093 Sum_probs=63.4
Q ss_pred ceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCCCC--------------------CCCCCC---CchhHHHHHHHHHHH
Q 014338 201 TNIQGWLQGLKADGDANQLPTIAIVASYDTFGAAPA--------------------LSVGSD---SNGSGVVALLEVARL 257 (426)
Q Consensus 201 ~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~p~--------------------~~~GAd---dn~SG~a~LLElar~ 257 (426)
.||+|+++|... .+..|+|++.||+|+.+..+. ++.|+. |+..|++++|++++.
T Consensus 54 ~nv~a~~~g~~g---~~~~~~i~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~dg~l~g~G~~lgaD~k~g~a~~l~a~~~ 130 (487)
T 2qyv_A 54 GNVLIRKPATVG---MENRKPVVLQAHLDMVPQANEGTNHNFDQDPILPYIDGDWVKAKGTTLGADNGIGMASALAVLES 130 (487)
T ss_dssp CCEEEEECCCTT---CTTBCCEEEEEESCBCCC----------CCCCCEEECSSEEEETTBCCCHHHHHHHHHHHHHHHC
T ss_pred CcEEEEeCCCCC---CCCCCeEEEEccCCccCCCCCCCccccccCCeeEEeeCCEEEeCCCCcCCcCHHHHHHHHHHHHh
Confidence 599999987521 013589999999999986421 133776 999999999999873
Q ss_pred HHhccCCCCCCCcceEEEEEeCCCCCCCcchHHHHHh
Q 014338 258 FSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRS 294 (426)
Q Consensus 258 ~~~l~~~~~~~p~~~I~F~~~~gEe~g~~GS~~~v~~ 294 (426)
. + .++.+|.|+++.+||.|..|++.++++
T Consensus 131 ---~----~-~~~~~v~~~~~~~EE~g~~Ga~~~~~~ 159 (487)
T 2qyv_A 131 ---N----D-IAHPELEVLLTMTEERGMEGAIGLRPN 159 (487)
T ss_dssp ---S----S-SCCSSEEEEEESCTTTTCHHHHTCCSS
T ss_pred ---C----C-CCCCCEEEEEEeccccCCHHHHHHHHh
Confidence 1 1 256799999999999999999998874
No 53
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=97.52 E-value=0.0006 Score=68.29 Aligned_cols=155 Identities=13% Similarity=0.082 Sum_probs=103.1
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCcceEEEEEeCCCCCCCcchHHHHHhccHhhhcCeeEEEEeccccCCC
Q 014338 237 LSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWN 316 (426)
Q Consensus 237 ~~~GAddn~SG~a~LLElar~~~~l~~~~~~~p~~~I~F~~~~gEe~g~~GS~~~v~~~~~~~~~~i~~vinlD~iG~~~ 316 (426)
+...+-||-.|++++||+++.+++. .+++++.|+++..||.|+.|++.......+ ..+|.+|+....+
T Consensus 176 i~s~~lDnr~g~~~~l~~l~~l~~~------~~~~~v~~~ft~qEEvG~~Ga~~a~~~~~p------d~~i~~D~~~a~d 243 (355)
T 3kl9_A 176 IISKAWDNRYGVLMVSELAEALSGQ------KLGNELYLGSNVQEEVGLRGAHTSTTKFDP------EVFLAVDCSPAGD 243 (355)
T ss_dssp EEESCHHHHHHHHHHHHHHHHHSSC------CCSSEEEEEEESCCTTTSHHHHHHHHHHCC------SEEEEEEEEECCG
T ss_pred EEeeccccHHHHHHHHHHHHHhhhc------CCCceEEEEEECccccCcchhHHHHhccCC------CEEEEecCccCCC
Confidence 3457889999999999999987642 357899999999999999998876665322 2478888754321
Q ss_pred ---------C-c-eeEEecCCCcchHHHHHHHHHHHHHHHhCceeccccccccCCCCCCCcchhhhhc--CCCeEEEEee
Q 014338 317 ---------N-E-LWIHVSKPPENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQFSR--LRVTAATLSE 383 (426)
Q Consensus 317 ---------~-~-l~~hvs~~p~~~~~~~~~~~l~~~a~~~~~~~~~~~~ki~~~~~~~~~dHe~F~~--~gIPa~tls~ 383 (426)
. . +.+.-+..+.+ ..+.+.+.++|++.|++.+.... .-.+|...+.. .|+|++.++-
T Consensus 244 ~p~~~~~lg~G~~i~~~d~~~~~~---~~l~~~l~~~a~~~gIp~q~~~~-------ggGtDa~~i~~a~~Gipt~~igv 313 (355)
T 3kl9_A 244 VYGGQGKIGDGTLIRFYDPGHLLL---PGMKDFLLTTAEEAGIKYQYYCG-------KGGTDAGAAHLKNGGVPSTTIGV 313 (355)
T ss_dssp GGTSSCCTTSCEEEEEEETTEECC---HHHHHHHHHHHHHTTCCEEEEEC-------SSCCTHHHHTTSTTCCCEEEEEE
T ss_pred CCCcccccCCCcEEEEecCCCCCC---HHHHHHHHHHHHHcCCCEEEECC-------CcchHHHHHHHhCCCCCEEEEcc
Confidence 1 1 11111222223 35666677778888888775211 12567666654 7999998864
Q ss_pred cCCCCCccccCCCCCCCcCCCCHHHHHHHHHHHHHHHHH
Q 014338 384 LSAAPELLESTGGLLDSRHFVDETSFIRSVKLVAESLAV 422 (426)
Q Consensus 384 ~~~~~~~~~~~~s~~Dt~d~ld~~~L~~~~~~iae~la~ 422 (426)
+.. .-||+. +.++.+.+...++++.+.+.+
T Consensus 314 -p~~-----~~Hs~~---E~~~~~Di~~~~~ll~~~l~~ 343 (355)
T 3kl9_A 314 -CAR-----YIHSHQ---TLYAMDDFLEAQAFLQALVKK 343 (355)
T ss_dssp -EEB-----SCSSSC---EEEEHHHHHHHHHHHHHHHHT
T ss_pred -CcC-----CCCCcc---eEeeHHHHHHHHHHHHHHHHH
Confidence 211 124554 567888888888887776643
No 54
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=96.37 E-value=0.022 Score=56.88 Aligned_cols=153 Identities=14% Similarity=0.119 Sum_probs=98.5
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCcceEEEEEeCCCCCCCcchHHHHHhccHhhhcCeeEEEEeccccCCC
Q 014338 237 LSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWN 316 (426)
Q Consensus 237 ~~~GAddn~SG~a~LLElar~~~~l~~~~~~~p~~~I~F~~~~gEe~g~~GS~~~v~~~~~~~~~~i~~vinlD~iG~~~ 316 (426)
+...+-||-.|++++||+++.++. +++++.|+++.-||.|+.|++.-..... . ..+|.+|+.-..+
T Consensus 179 i~s~~lDnr~g~~~~l~~l~~l~~--------~~~~v~~~ft~qEEVG~~ga~~aa~~i~----p--d~~i~~Dv~~a~d 244 (354)
T 2vpu_A 179 FATPYLDDRICLYAMIEAARQLGD--------HEADIYIVGSVQEEVGLRGARVASYAIN----P--EVGIAMDVTFAKQ 244 (354)
T ss_dssp EECTTHHHHHHHHHHHHHHHHCCC--------CSSEEEEEECSCCTTTSHHHHHHHHHHC----C--SEEEEEEEEECCC
T ss_pred EEEecCccHHHHHHHHHHHHHhhc--------CCCeEEEEEECCcccCccchhhhhcccC----C--CEEEEecccccCC
Confidence 355778999999999999987642 4689999999999999999886554432 2 2566677642211
Q ss_pred ------------CceeEEecCCCcchHHHHHHHHHHHHHHHhCceeccccccccCCCCC-CCcchhhhh--cCCCeEEEE
Q 014338 317 ------------NELWIHVSKPPENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPR-VAWEHEQFS--RLRVTAATL 381 (426)
Q Consensus 317 ------------~~l~~hvs~~p~~~~~~~~~~~l~~~a~~~~~~~~~~~~ki~~~~~~-~~~dHe~F~--~~gIPa~tl 381 (426)
....+.. ..+.+ ..+.+.+.++|++.|++.+... .+. -.+|-..+. ..|+|++.+
T Consensus 245 p~~~~~~~~~lg~Gpv~d~-~~~~~---~~l~~~l~~~a~~~gIp~q~~~------~~g~gGtDa~~i~~a~~Gipt~~I 314 (354)
T 2vpu_A 245 PHDKGKIVPELGKGPVMDV-GPNIN---PKLRAFADEVAKKYEIPLQVEP------SPRPTGTDANVMQINKEGVATAVL 314 (354)
T ss_dssp TTSTTCCCCCTTSCCEEEE-STTSC---HHHHHHHHHHHHHTTCCCEEEE------CCSCCSSTHHHHHTSTTCCEEEEE
T ss_pred CCcccccCceECCcceEcC-CCCCC---HHHHHHHHHHHHHcCCCcEEEe------CCCCCccHHHHHHHhcCCCCEEEE
Confidence 0011111 12223 3566667777888888776521 111 145555564 469999988
Q ss_pred eecCCCCCccccCCCCCCCcCCCCHHHHHHHHHHHHHHHHH
Q 014338 382 SELSAAPELLESTGGLLDSRHFVDETSFIRSVKLVAESLAV 422 (426)
Q Consensus 382 s~~~~~~~~~~~~~s~~Dt~d~ld~~~L~~~~~~iae~la~ 422 (426)
+-- . + .-||+. |.++.+.+...++++.+.+.+
T Consensus 315 gvp-~-~----~~Hs~~---E~~~~~D~~~~~~ll~~~l~~ 346 (354)
T 2vpu_A 315 SIP-I-R----YMHSQV---ELADARDVDNTIKLAKALLEE 346 (354)
T ss_dssp EEE-E-B----STTSTT---CEEEHHHHHHHHHHHHHHHHH
T ss_pred Ccc-c-c----cCcCcc---eEeeHHHHHHHHHHHHHHHHh
Confidence 742 1 1 124554 567888899888888887754
No 55
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=95.90 E-value=0.054 Score=53.84 Aligned_cols=153 Identities=15% Similarity=0.118 Sum_probs=95.3
Q ss_pred CCCCCCchhHHHHHHHHHHHHHhccCCCCCCCcceEEEEEeCCCCCCCcchHHHHHhccHhhhcCeeEEEEeccccCCCC
Q 014338 238 SVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESIDYAICLNSVGSWNN 317 (426)
Q Consensus 238 ~~GAddn~SG~a~LLElar~~~~l~~~~~~~p~~~I~F~~~~gEe~g~~GS~~~v~~~~~~~~~~i~~vinlD~iG~~~~ 317 (426)
...+-||-.|++++||+++.+.. ++++.|+++.-||.|+.|++.-..... . ..+|.+|+.-..+.
T Consensus 175 ~s~~lDdR~g~~~~l~~l~~l~~---------~~~~~~~ft~qEEVG~~Ga~~aa~~i~----p--d~~i~vDv~~a~d~ 239 (343)
T 3isx_A 175 VSKAMDDRIGCAVIVEVFKRIKP---------AVTLYGVFSVQEEVGLVGASVAGYGVP----A--DEAIAIDVTDSADT 239 (343)
T ss_dssp EESCHHHHHHHHHHHHHHHHCCC---------SSEEEEEEECCCCTTSCCSTTTGGGCC----C--SEEEEEEEEECCCS
T ss_pred EeccCccHHHHHHHHHHHHhccC---------CCeEEEEEECCcccCchhHHHHhhcCC----C--CEEEEEeCcCCCCC
Confidence 44677999999999999887631 578999999999999999875544432 2 24677776432210
Q ss_pred ce-----eEEecCCC-------cchHHHHHHHHHHHHHHHhCceeccccccccCCCCCCCcchhhh--hcCCCeEEEEee
Q 014338 318 EL-----WIHVSKPP-------ENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQF--SRLRVTAATLSE 383 (426)
Q Consensus 318 ~l-----~~hvs~~p-------~~~~~~~~~~~l~~~a~~~~~~~~~~~~ki~~~~~~~~~dHe~F--~~~gIPa~tls~ 383 (426)
.- ....++-| ....-..+.+.+.++|++.|++.+... . +...+|-..+ +..|+|++.++-
T Consensus 240 p~~~~~~~~~lg~GpvI~~~d~~~~~d~~l~~~l~~~A~~~gIp~Q~~v---~---~ggGTDa~~i~~a~~Gipt~~Igv 313 (343)
T 3isx_A 240 PKAIKRHAMRLSGGPALKVKDRASISSKRILENLIEIAEKFDIKYQMEV---L---TFGGTNAMGYQRTREGIPSATVSI 313 (343)
T ss_dssp TTCCCTTCCCTTSCCEEECBTTCCHHHHHHHHHHHHHHHHTTCCCEECC---C---BCCCSSHHHHHHHTSSCCEEEEEE
T ss_pred CCcccccccccCCCcEEEEcCCCCCCCHHHHHHHHHHHHHCCCCeEEec---C---CCCchHHHHHHHhcCCCCEEEEcc
Confidence 00 00111111 112234666777888888888777521 1 1124554444 457999998874
Q ss_pred cCCCCCccccCCCCCCCcCCCCHHHHHHHHHHHHHHH
Q 014338 384 LSAAPELLESTGGLLDSRHFVDETSFIRSVKLVAESL 420 (426)
Q Consensus 384 ~~~~~~~~~~~~s~~Dt~d~ld~~~L~~~~~~iae~l 420 (426)
- . + .-||+. |.++.+.+...++++.+.+
T Consensus 314 p-~-r----~~Hs~~---E~~~~~Di~~~~~ll~~~l 341 (343)
T 3isx_A 314 P-T-R----YVHSPS---EMIAPDDVEATVDLLIRYL 341 (343)
T ss_dssp E-E-B----STTSTT---EEECHHHHHHHHHHHHHHH
T ss_pred c-c-c----cccchh---hEecHHHHHHHHHHHHHHH
Confidence 2 1 1 124554 5678888888888877654
No 56
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=85.93 E-value=0.015 Score=54.73 Aligned_cols=80 Identities=14% Similarity=0.001 Sum_probs=39.1
Q ss_pred ceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCCC-------CCCCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCcceE
Q 014338 201 TNIQGWLQGLKADGDANQLPTIAIVASYDTFGAA-------PALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNI 273 (426)
Q Consensus 201 ~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~~-------p~~~~GAddn~SG~a~LLElar~~~~l~~~~~~~p~~~I 273 (426)
.||+|+++|. .|.|++.||+|+.+.. +.+..+..+...|.+++...++.+... ..+...+
T Consensus 53 GNlia~~~g~--------~p~lll~~H~Dtvp~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 119 (354)
T 2wzn_A 53 GNVIAHFKGS--------SPRIMVAAHMDKIGVMVNHIDKDGYLHIVPIGGVLPETLVAQRIRFFTEK-----GERYGVV 119 (354)
T ss_dssp CCEEEEECCS--------SSEEEEEEECCBCEEEEEEECTTSCEEEEEESSCCGGGGTTCEEEEEETT-----EEEEEEE
T ss_pred CeEEEEECCC--------CceEEEEeccccCCCcCCeeecCCceeeccCCCccHHHHHHHHHHHhhcc-----CCccceE
Confidence 5999999763 4789999999998752 111222223333333333322222211 1234556
Q ss_pred EEEEeCCCCCCCcchHHHHH
Q 014338 274 LFGLTSGGPYNYNGTHKWLR 293 (426)
Q Consensus 274 ~F~~~~gEe~g~~GS~~~v~ 293 (426)
.+++...||.+..|++....
T Consensus 120 ~~~~~~~ee~~~~~~~~~~~ 139 (354)
T 2wzn_A 120 GVLPPHLRRGQEDKGSKIDW 139 (354)
T ss_dssp CCCCGGGC---------CCG
T ss_pred EEeeeeeEecccccccchhh
Confidence 67777778877777766543
No 57
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=78.27 E-value=1.9 Score=43.93 Aligned_cols=154 Identities=10% Similarity=0.005 Sum_probs=89.9
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhccCCCCCCCcceEEEEEeCCCCCCCcchHHHHHhccHhhhcCe-------------
Q 014338 237 LSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLRESI------------- 303 (426)
Q Consensus 237 ~~~GAddn~SG~a~LLElar~~~~l~~~~~~~p~~~I~F~~~~gEe~g~~GS~~~v~~~~~~~~~~i------------- 303 (426)
+...+-||=.|+.++|++.+.+. . ++.++.+++ +-||.|..|++.-...+.+..+++|
T Consensus 229 I~s~~lDdr~~~~~~l~al~~~~--~------~~~~v~~~f-d~EEVGs~ga~gA~s~~~~~~l~ri~~~~~~~~~~~~~ 299 (428)
T 2ijz_A 229 IAGARLDNLLSCHAGLEALLNAE--G------DENCILVCT-DHEEVGSCSHCGADGPFLEQVLRRLLPEGDAFSRAIQR 299 (428)
T ss_dssp SSCCCSSCSSTTTTTTTHHHHTT--S------CSSSCEEEE-CBSCTTTTCHHHHSSCCTTTSCCSSSSSSSSSTTTTTS
T ss_pred EEeecCccHHHHHHHHHHHHhcc--c------CCceEEEEE-eccccCccchhhhhccccHHHHHHhhhhhhHHHhhhhc
Confidence 35677889999999999988763 1 246776666 9999999998876555433223444
Q ss_pred eEEEEeccccCCCCceeE--E-------ec-----------CCCcchHHHHHHHHHHHHHHHhCceeccccccccCCCCC
Q 014338 304 DYAICLNSVGSWNNELWI--H-------VS-----------KPPENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPR 363 (426)
Q Consensus 304 ~~vinlD~iG~~~~~l~~--h-------vs-----------~~p~~~~~~~~~~~l~~~a~~~~~~~~~~~~ki~~~~~~ 363 (426)
.++|.+|+.-.. ..-|- | .. +...+ ..+.+.+.++|++.+++++...-+ .|..
T Consensus 300 s~~is~Dv~ha~-~Pn~~~~~~~~~~~~lg~G~vIk~~~~~~~~~~---~~~~~~l~~~a~~~~Ip~Q~~~~~---~d~~ 372 (428)
T 2ijz_A 300 SLLVSADNAHGV-HPNYADRHDANHGPALNGGPVIKINSNQRYATN---SETAGFFRHLCQDSEVPVQSFVTR---SDMG 372 (428)
T ss_dssp CCEEEECCCCCC-CSSCGGGCCSSCCCSSSCCCBCCCCSSSCCSCC---HHHHTTTTHHHHHTCCCCCBCCCC---SSCC
T ss_pred CEEEEEeccccc-CCCCcccccccCCcccCCCcEEEEECCCCCCCC---HHHHHHHHHHHHHcCCCeEEEEEe---CCCC
Confidence 689999986432 11111 0 00 11122 244555666788888888764322 1222
Q ss_pred CCcchhhh--hcCCCeEEEEeecCCCCCccccCCCCCCCcCCCCHHHHHHH
Q 014338 364 VAWEHEQF--SRLRVTAATLSELSAAPELLESTGGLLDSRHFVDETSFIRS 412 (426)
Q Consensus 364 ~~~dHe~F--~~~gIPa~tls~~~~~~~~~~~~~s~~Dt~d~ld~~~L~~~ 412 (426)
..++--++ +..|||++.++- +- +.-||+.-+...-|...+.+.
T Consensus 373 gGsd~g~i~~~~~Gi~tvdiGi-p~-----~~mHS~~E~~~~~D~~~~~~l 417 (428)
T 2ijz_A 373 CGSTIGPITASQVGVRTVDIGL-PT-----FAMHSIRELAGSHDLAHLVKV 417 (428)
T ss_dssp CCCCCSTTTGGGGSCCEEEECC-CC-----CSCSSSSCCCCSSHHHHHHTT
T ss_pred ccchHHHHHHhCCCCCEEEEch-hh-----cccchHHHHhhHHHHHHHHHH
Confidence 23443344 357999999864 11 123576655555554444433
No 58
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=77.47 E-value=3.1 Score=42.63 Aligned_cols=159 Identities=7% Similarity=-0.022 Sum_probs=86.8
Q ss_pred CCCCCCchhHHHHHHHHHHHHHhccCCCCCCCcceEEEEEeCCCCCCCcchH----HHHHhccHhh---h----------
Q 014338 238 SVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTH----KWLRSFDQRL---R---------- 300 (426)
Q Consensus 238 ~~GAddn~SG~a~LLElar~~~~l~~~~~~~p~~~I~F~~~~gEe~g~~GS~----~~v~~~~~~~---~---------- 300 (426)
+.++-||-.|+.++||..+.+ . +..++++++++-||.|..|++ .++++.-.+. +
T Consensus 244 ~~~~lDnr~~~~~~l~al~~~---~------~~~~~~~~~~d~EEVGs~ga~gA~s~~l~~~l~ri~~~~~~~~~~~~~~ 314 (450)
T 2glf_A 244 GAYGQDDRICAYTALRALLSA---N------PEKSIGVIFFDKEEIGSDGNTGAKARFYLKALRQILKMQGAKDSEFVLD 314 (450)
T ss_dssp EETTHHHHHHHHHHHHHHHHC---C------CSSCEEEEEESCGGGTSCSSSSSSSSHHHHHHHHHHHHTTCSSSHHHHH
T ss_pred EEecchhhHHHHHHHHHHHhc---C------CCceEEEEEEcccccCCcchhhhcchhHHHHHHHHHHhhccccchHHHH
Confidence 346678999999999987764 1 356899999999999988766 3333321100 0
Q ss_pred --cCeeEEEEeccccCCCCcee-----------------EEecCCCc--c-h--HHHHHHHHHHHHHHHhCceeccccc-
Q 014338 301 --ESIDYAICLNSVGSWNNELW-----------------IHVSKPPE--N-A--YIKQIFEGFTNVAEELGFKVGLKHK- 355 (426)
Q Consensus 301 --~~i~~vinlD~iG~~~~~l~-----------------~hvs~~p~--~-~--~~~~~~~~l~~~a~~~~~~~~~~~~- 355 (426)
-+-.++|..|+.-.. ++.| +-....+. - + .-..+...+.++|++.+++++...-
T Consensus 315 ~~l~~s~~iS~DvahA~-~Pn~~~~~~~~~~~~lg~Gpvik~~~~a~~~y~t~~~~~~~~~~~~~ia~~~~Ip~Q~~~~g 393 (450)
T 2glf_A 315 EVLENTSVISGDVCAAV-NPPYKDVHDLHNAPKLGYGVALVKYTGARGKYSTNDAHAEFVARVRKVLNEQGVIWQVATLG 393 (450)
T ss_dssp HHHHSCEEEEECCEECC-CGGGGGGSCGGGCCCTTSCEEEESBCCSTTSTTCCBCCHHHHHHHHHHHHHTTCCEEECCSS
T ss_pred HhhcCCeEEEEecccCc-CCCCcccccccCCccCCcCCEEEEECCCCcccccccCCHHHHHHHHHHHHHcCCCEEEEEec
Confidence 022578888875432 1111 11000000 0 0 1134555666778888888886332
Q ss_pred cccCCC-CCCCcchhhhhcCCCeEEEEeecCCCCCccccCCCCCCCcCCCCHHHHHHHHHHHHH
Q 014338 356 KINISN-PRVAWEHEQFSRLRVTAATLSELSAAPELLESTGGLLDSRHFVDETSFIRSVKLVAE 418 (426)
Q Consensus 356 ki~~~~-~~~~~dHe~F~~~gIPa~tls~~~~~~~~~~~~~s~~Dt~d~ld~~~L~~~~~~iae 418 (426)
+.+... .....-| ++.|||++.++- +- +.-||+.-+...-| +...++++.+
T Consensus 394 r~d~~gGstig~i~---a~~Gi~tvdiGi-P~-----l~MHS~~E~~~~~D---~~~~~~l~~a 445 (450)
T 2glf_A 394 KVDQGGGGTIAKFF---AERGSDVIDMGP-AL-----LGMHSPFEISSKAD---LFETYVAYRS 445 (450)
T ss_dssp STTSCCCCCTHHHH---HTTTSCEEEEEC-EE-----BSTTSSSEEEEHHH---HHHHHHHHHH
T ss_pred cCCCCCCCcHHHHH---hCCCCcEEEech-hh-----cccchHHHHhhHHH---HHHHHHHHHH
Confidence 211111 1112222 578999999874 11 12357775544444 4444444443
No 59
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=74.22 E-value=1.9 Score=44.74 Aligned_cols=172 Identities=10% Similarity=-0.038 Sum_probs=87.7
Q ss_pred CCCCCCchhHHHHHHHHHHHHHhccCCCCCCCcceEEEEEeCCCCCCCcchHHHHHhccHhhh----------------c
Q 014338 238 SVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTHKWLRSFDQRLR----------------E 301 (426)
Q Consensus 238 ~~GAddn~SG~a~LLElar~~~~l~~~~~~~p~~~I~F~~~~gEe~g~~GS~~~v~~~~~~~~----------------~ 301 (426)
..++-||=.|+.++||..+.+..........+...+ +++|+-||.|..|++--.....+..+ -
T Consensus 280 ~s~~lDnr~~~~~~leaL~~~~~~~~~~~~~~~~~v-~v~~dqEEVGs~ga~gA~s~~~pdvl~ri~~~~~~~~~~~~~l 358 (496)
T 3vat_A 280 FAPRLDNLHSCFCALQALIDSCSAPASLAADPHVRM-IALYDNEEVGSESAQGAQSLLTELVLRRISASPQHLTAFEEAI 358 (496)
T ss_dssp EETTHHHHHHHHHHHHHHHHHTTSHHHHHHCCSEEE-EEEESCGGGTSCSSSSTTSTHHHHHHHHHHCCSSCTTHHHHHG
T ss_pred EeeccccHHHHHHHHHHHHhhhccccccccCCCcEE-EEEEccCCcCCCcchhccccccHHHHHHHHhccCchHHHHHHh
Confidence 456778999999999988776421000000123444 99999999988765542221111000 0
Q ss_pred CeeEEEEeccccCCC----------------CceeEEecCCCcchHHHHHHHHHHHHHHHhCceeccccccccCCCCCCC
Q 014338 302 SIDYAICLNSVGSWN----------------NELWIHVSKPPENAYIKQIFEGFTNVAEELGFKVGLKHKKINISNPRVA 365 (426)
Q Consensus 302 ~i~~vinlD~iG~~~----------------~~l~~hvs~~p~~~~~~~~~~~l~~~a~~~~~~~~~~~~ki~~~~~~~~ 365 (426)
.-.++|..|+.-..+ ...-+-....-+-..-..+...+.++|++.+++++....+.+. ...
T Consensus 359 ~~S~~IS~DvahA~dPn~~~~~~~~~~~~LG~GpvIK~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q~~v~r~D~---~gG 435 (496)
T 3vat_A 359 PKSYMISADMAHAVHPNYLDKHEENHRPLFHKGPVIKVNSKQRYASNAVSEALIREVASSVGVPLQDLMVRNDS---PCG 435 (496)
T ss_dssp GGCEEEEECCEECCBTTBGGGSCTTCCCCTTSCCEEECCTTTTSCCCHHHHHHHHHHHHHHTCCCEEECCCTTS---CCC
T ss_pred hcCeEEEEeCCCCCCCCCcccccccCCcccCcCCEEEEcCCCCcccCHHHHHHHHHHHHHcCCCEEEEEecCCC---CCc
Confidence 124788888752221 0111111100000011345555667788888888864322111 112
Q ss_pred cchhhh--hcCCCeEEEEeecCCCCCccccCCCCCCCcCCCCHHHHHHHHHHHHHH
Q 014338 366 WEHEQF--SRLRVTAATLSELSAAPELLESTGGLLDSRHFVDETSFIRSVKLVAES 419 (426)
Q Consensus 366 ~dHe~F--~~~gIPa~tls~~~~~~~~~~~~~s~~Dt~d~ld~~~L~~~~~~iae~ 419 (426)
+.--++ ++.|||++.++- +. +.-||+.-+...-|+..+.+..+...+.
T Consensus 436 gTig~i~~s~~Gi~tvdIGi-P~-----ryMHS~~E~~~~~D~~~~v~Ll~af~~~ 485 (496)
T 3vat_A 436 TTIGPILASRLGLRVLDLGS-PQ-----LAMHSIRETACTTGVLQTITLFKGFFEL 485 (496)
T ss_dssp CCHHHHHHHHHTCEEEEEEC-EE-----ESTTSSSEEEESHHHHHHHHHHHHHHHH
T ss_pred chHHHHHhcccCCcEEEecH-hh-----hccccHHHHhhHHHHHHHHHHHHHHHHh
Confidence 222223 357999999974 11 1235777665565555555444444443
No 60
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=66.31 E-value=27 Score=26.56 Aligned_cols=77 Identities=16% Similarity=0.234 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHhCceeccccccccCCCCCCCcchhhhhcCCCeEEEEeecCCCCCccccCCCCCCCcCCCCHHHHHHHHH
Q 014338 335 IFEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSAAPELLESTGGLLDSRHFVDETSFIRSVK 414 (426)
Q Consensus 335 ~~~~l~~~a~~~~~~~~~~~~ki~~~~~~~~~dHe~F~~~gIPa~tls~~~~~~~~~~~~~s~~Dt~d~ld~~~L~~~~~ 414 (426)
+++.+.++.++.|....... ....+|-..|...|+|++.+......++ .-|+. -|.|+.+.|.+.++
T Consensus 3 ~v~~l~~a~~~~g~~~~~~~-------~~g~TDar~~~~~gip~v~fGPg~~~~~---~~H~~---dE~v~i~~l~~~~~ 69 (88)
T 1q7l_B 3 WWAAFSRVCKDMNLTLEPEI-------MPAAGDNRYIRAVGVPALGFSPMNRTPV---LLHDH---DERLHEAVFLRGVD 69 (88)
T ss_dssp HHHHHHHHHHHTTCCEEEEE-------CCSCSHHHHHHHTTCCEEEECCCCSCCC---CTTST---TCEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCeeEeee-------eceeCcHHHHHHcCCCEEEECCCCCCcc---cccCC---CCeeEHHHHHHHHH
Confidence 44555555555454433211 1124566667778999999876532111 12333 27899999999999
Q ss_pred HHHHHHHHHh
Q 014338 415 LVAESLAVSL 424 (426)
Q Consensus 415 ~iae~la~~~ 424 (426)
+.++.+.++.
T Consensus 70 iy~~~i~~~~ 79 (88)
T 1q7l_B 70 IYTRLLPALA 79 (88)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999887753
No 61
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=64.04 E-value=3.9 Score=40.39 Aligned_cols=29 Identities=17% Similarity=0.307 Sum_probs=23.9
Q ss_pred cceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCC
Q 014338 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGA 233 (426)
Q Consensus 200 ~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~ 233 (426)
..||+++++|.+. ..|.|++.||+|+.|.
T Consensus 45 ~GNli~~~~g~~~-----~~~~v~l~aHmD~Vg~ 73 (355)
T 3kl9_A 45 LGGIFGIKHSEAV-----DAPRVLVASHMDEVGF 73 (355)
T ss_dssp TSCEEEEECCCST-----TCCEEEEEEECCBCEE
T ss_pred CCeEEEEECCcCC-----CCCeEEEEeccccccc
Confidence 4599999988641 3689999999999986
No 62
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=52.48 E-value=7.5 Score=38.36 Aligned_cols=26 Identities=27% Similarity=0.523 Sum_probs=22.1
Q ss_pred cceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCC
Q 014338 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGA 233 (426)
Q Consensus 200 ~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~ 233 (426)
..||+++++|. .|.|++.||+|+.|.
T Consensus 52 ~GNvi~~~~g~--------~~~v~l~aHmDtVg~ 77 (354)
T 2vpu_A 52 LGNVIAHFKGS--------SPRIMVAAHMDKIGV 77 (354)
T ss_dssp TCCEEEEECCS--------SSEEEEECCCCBCEE
T ss_pred CCeEEEEEcCC--------CCEEEEEecccccce
Confidence 56999999873 379999999999986
No 63
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=45.46 E-value=11 Score=36.98 Aligned_cols=26 Identities=23% Similarity=0.404 Sum_probs=21.3
Q ss_pred cceEEEEEcCcCCCCCCCCCCEEEEEecCCCCCC
Q 014338 200 ITNIQGWLQGLKADGDANQLPTIAIVASYDTFGA 233 (426)
Q Consensus 200 ~~NV~g~l~G~~~~~~~~~~~~Ivi~AHyDs~g~ 233 (426)
..||++++ |. ..|.|++.||+|+.|.
T Consensus 53 ~Gnvi~~~-g~-------~~~~v~l~aHmDevG~ 78 (343)
T 3isx_A 53 LGNLIVWK-GS-------GEKKVILDAHIDEIGV 78 (343)
T ss_dssp TCCEEEEE-CC-------CSSEEEEEEECCBCEE
T ss_pred CCCEEEEE-CC-------CCCEEEEEecccccce
Confidence 46999988 42 2689999999999986
No 64
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=33.16 E-value=11 Score=38.72 Aligned_cols=161 Identities=9% Similarity=0.029 Sum_probs=83.0
Q ss_pred CCCCCCchhHHHHHHHHHHHHHhccCCCCCCCcceEEEEEeCCCCCCCcchH----HHHHhccHhhh-----cCe-e---
Q 014338 238 SVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTH----KWLRSFDQRLR-----ESI-D--- 304 (426)
Q Consensus 238 ~~GAddn~SG~a~LLElar~~~~l~~~~~~~p~~~I~F~~~~gEe~g~~GS~----~~v~~~~~~~~-----~~i-~--- 304 (426)
..++-||=.|+.++|++.+.+.. .+.++++|++++-||.|..|++ .|+++.-.+.. ... .
T Consensus 250 ~s~~lDdr~~~~~~l~al~~~~~-------~~~~~~~~~~~d~EEVGs~ga~ga~s~~l~~~l~ri~~~~~~~~~~~~~~ 322 (458)
T 1y7e_A 250 GAYGQDDKICVFTSLESIFDLEE-------TPNKTAICFLVDKEEIGSTGSTGLDSRYLEYFVSDMIFKIKKSEYNNLHV 322 (458)
T ss_dssp EESSHHHHHHHHHHHHHHSSSSC-------CCSSCEECCCBCSTTC--------CTTHHHHHHHHHHHHHSSTTCCTHHH
T ss_pred EEecCccHHHHHHHHHHHHhhhc-------cCCceEEEEEEcccccCcccchhhccchHHHHHHHHHHhhccCCcchHHH
Confidence 34566888999999998765421 2567899999999999998876 44444322211 111 3
Q ss_pred -------EEEEeccccCCCCcee-----------------EEe---cCCCcch--HHHHHHHHHHHHHHHhCceeccccc
Q 014338 305 -------YAICLNSVGSWNNELW-----------------IHV---SKPPENA--YIKQIFEGFTNVAEELGFKVGLKHK 355 (426)
Q Consensus 305 -------~vinlD~iG~~~~~l~-----------------~hv---s~~p~~~--~~~~~~~~l~~~a~~~~~~~~~~~~ 355 (426)
++|.+|+.-.. ++.| +-. +..+..+ .-..+...+.++|++.+++++...-
T Consensus 323 ~~~~~~S~~is~Dv~ha~-dPn~~~~~~~~~~~~lg~G~vIk~~d~~~~~y~t~~~~~~~~~~l~~~a~~~~Ip~Q~~~~ 401 (458)
T 1y7e_A 323 QKALWNSKSISADVCAAI-NPLFSSVHDEQNAPQLGYGIPIMKYTGHGGKSMASDADAELVSYIRQLLNKNNIAWQVATL 401 (458)
T ss_dssp HHHHHHCEEEECCCEECC-CC-------CTTSCCTTSCEEEEEEC-----------CHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred HHHHhcceEEEEeccccc-CCCCcccccccCCcccCCCcEEEEEcCCCCccccccCCHHHHHHHHHHHHHcCCCeEEEEe
Confidence 78899986433 2111 110 1110000 0134556667778888888876322
Q ss_pred -cccCCCCCCCc-chhhhhcCCCeEEEEeecCCCCCccccCCCCCCCcCCCCHHHHHHHHHHHHH
Q 014338 356 -KINISNPRVAW-EHEQFSRLRVTAATLSELSAAPELLESTGGLLDSRHFVDETSFIRSVKLVAE 418 (426)
Q Consensus 356 -ki~~~~~~~~~-dHe~F~~~gIPa~tls~~~~~~~~~~~~~s~~Dt~d~ld~~~L~~~~~~iae 418 (426)
+.+. ...+ .--..+..|||++.+.-- - +.-||+.- .++.+.+...++++.+
T Consensus 402 ~r~d~---~~GgT~~~~~a~~Gi~tvdiGiP-~-----~~mHS~~E---~~~~~Di~~~~~ll~a 454 (458)
T 1y7e_A 402 GKVEE---GGGGTVAKFLAGYGIRTIDMGPA-V-----ISMHSPME---ITSKFDLYNAYLAYKA 454 (458)
T ss_dssp CC--------CHHHHHHHHHHTCEEEEECCE-E-----BSTTSSSE---EEEHHHHHHHHHHHHH
T ss_pred eccCC---CCcCcHHHHHhCCCCCEEEEchh-h-----cccchHHH---HhhHHHHHHHHHHHHH
Confidence 2111 1122 222246789999988631 1 12356654 4555555555555543
No 65
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=29.38 E-value=1.1e+02 Score=29.11 Aligned_cols=74 Identities=12% Similarity=0.085 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHhCceeccccccccCCCCCCCcchhhhhcCCCeEEEEeecCCCCCccccCCCCCCCcCCCCHHHHHHHH
Q 014338 334 QIFEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSAAPELLESTGGLLDSRHFVDETSFIRSV 413 (426)
Q Consensus 334 ~~~~~l~~~a~~~~~~~~~~~~ki~~~~~~~~~dHe~F~~~gIPa~tls~~~~~~~~~~~~~s~~Dt~d~ld~~~L~~~~ 413 (426)
.+.+.+.+++++.|+...... ..-..|-..|...|+|++.+.-.. .. -|++. +.++.+.|.+.+
T Consensus 298 ~l~~~~~~~~~~~g~~~~~~~-------~~g~~D~~~~~~~gip~~~~g~~~---~~---~H~~~---E~i~~~~l~~~~ 361 (373)
T 3gb0_A 298 HVVEVAKRAAEKIGRTPSLHQ-------SGGGSDANVIAGHGIPTVNLAVGY---EE---IHTTN---EKIPVEELAKTA 361 (373)
T ss_dssp HHHHHHHHHHHHTTCCCEEEE-------CSSCCHHHHHHHTTCCEEEEECCC---BS---TTSTT---CEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCceEec-------ccCcchHHHHHhCCCCEEEecCCC---Cc---CcCCc---eEEEHHHHHHHH
Confidence 455666666666665432211 011346666777899999876431 12 23443 678999999999
Q ss_pred HHHHHHHHHH
Q 014338 414 KLVAESLAVS 423 (426)
Q Consensus 414 ~~iae~la~~ 423 (426)
+++++.+.++
T Consensus 362 ~~~~~~l~~l 371 (373)
T 3gb0_A 362 ELVVAIIEEV 371 (373)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999888664
No 66
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=26.17 E-value=1.4e+02 Score=28.82 Aligned_cols=74 Identities=11% Similarity=-0.006 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHhCceeccccccccCCCCCCCcchhhhhcCCCeEEEEeecCCCCCccccCCCCCCCcCCCCHHHHHHHH
Q 014338 334 QIFEGFTNVAEELGFKVGLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSAAPELLESTGGLLDSRHFVDETSFIRSV 413 (426)
Q Consensus 334 ~~~~~l~~~a~~~~~~~~~~~~ki~~~~~~~~~dHe~F~~~gIPa~tls~~~~~~~~~~~~~s~~Dt~d~ld~~~L~~~~ 413 (426)
.+++.+.+++++.|+...... ..-..|-..|...|+|++.+.-.. .. -|++. +.++.+.|.+.+
T Consensus 318 ~l~~~~~~~~~~~g~~~~~~~-------~~g~tD~~~~~~~giP~~~~g~g~---~~---~H~~~---E~v~~~~l~~~~ 381 (396)
T 3rza_A 318 AVVKIAQESARNLGLSANTII-------SGGGSDGSIINTFGIPSVILGVGY---EK---IHTTN---ERMPIKSLNLLA 381 (396)
T ss_dssp HHHHHHHHHHHHTTCCCCEEE-------CSSCCHHHHHGGGTCCEEEEECCC---BS---TTSTT---CEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCceecc-------cceeccHHHHhhCCCcEEEECCCC---CC---CCCCc---ceeEHHHHHHHH
Confidence 456666666666664432110 011346656777799999875431 11 23443 678999999999
Q ss_pred HHHHHHHHHH
Q 014338 414 KLVAESLAVS 423 (426)
Q Consensus 414 ~~iae~la~~ 423 (426)
+++++.+.++
T Consensus 382 ~~~~~~~~~l 391 (396)
T 3rza_A 382 SQVLEIIKIV 391 (396)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9998887653
No 67
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=23.01 E-value=73 Score=26.90 Aligned_cols=56 Identities=9% Similarity=0.081 Sum_probs=34.9
Q ss_pred CHHHHHHHHhccCCceEEEEecCccccccCCCCCCCchhhHHHHHHHHHHHHHhhccCCCCcEEEeeC
Q 014338 88 NISFVTEYVSRKHPLGGMLFLLPEIFRLENGGGGKDVREKEVVKNVLLELEKLLVHAKLPYPVYFAFE 155 (426)
Q Consensus 88 ~~~~~~~~~~~~~~~~gvli~lp~~~~~~s~~~~n~~~~~~~~~~~~~~le~~Ll~~~~~~Pvyf~~~ 155 (426)
..+.+.++++. ..+.++||=+|.++.. ..++.+...+.|.. . |...+.+||++.-|
T Consensus 41 ~~~~l~~li~e-~~v~~iVvGlP~~mdG-------t~~~~~~~~~~f~~---~-L~~~~~lpV~~~DE 96 (138)
T 1nu0_A 41 DWNIIERLLKE-WQPDEIIVGLPLNMDG-------TEQPLTARARKFAN---R-IHGRFGVEVKLHDE 96 (138)
T ss_dssp CHHHHHHHHHH-HCCSEEEEEEEECTTS-------CBCHHHHHHHHHHH---H-HHHHHCCCEEEEEE
T ss_pred HHHHHHHHHHH-cCCCEEEEecccCCCc-------CcCHHHHHHHHHHH---H-HHHHhCCCEEEEcC
Confidence 36788888775 3588888889988874 12233333345533 2 22235799999954
No 68
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=20.84 E-value=2.1e+02 Score=26.98 Aligned_cols=75 Identities=11% Similarity=0.120 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHH-hCceeccccccccCCCCCCCcchhhhhcCCCeEEEEeecCCCCCccccCCCCCCCcCCCCHHHHHHH
Q 014338 334 QIFEGFTNVAEE-LGFKVGLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSAAPELLESTGGLLDSRHFVDETSFIRS 412 (426)
Q Consensus 334 ~~~~~l~~~a~~-~~~~~~~~~~ki~~~~~~~~~dHe~F~~~gIPa~tls~~~~~~~~~~~~~s~~Dt~d~ld~~~L~~~ 412 (426)
.+++.+.+++++ +|.+...... .-..|-..|...++|++.+.... .. -|++. +.++.+.+.+.
T Consensus 300 ~l~~~l~~a~~~~~g~~~~~~~~-------~g~tDa~~~~~~g~~~v~~Gp~~---~~---~H~~~---E~i~~~~l~~~ 363 (377)
T 3isz_A 300 KLLDSITSAIEETIGITPKAETG-------GGTSDGRFIALMGAEVVEFGPLN---ST---IHKVN---ECVSVEDLGKC 363 (377)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEEC-------SSCCSHHHHHTTTCEEEECCSBC---TT---TTSTT---CEEEHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCeeecc-------CcccHHHHHHHcCCCEEEECCCC---Cc---ccCCC---CcEEHHHHHHH
Confidence 466666666655 5655432110 11235555777899999875432 11 23443 68999999999
Q ss_pred HHHHHHHHHHHh
Q 014338 413 VKLVAESLAVSL 424 (426)
Q Consensus 413 ~~~iae~la~~~ 424 (426)
+++++..+.+++
T Consensus 364 ~~i~~~~i~~ll 375 (377)
T 3isz_A 364 GEIYHKMLVNLL 375 (377)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999999887754
No 69
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=20.37 E-value=35 Score=34.86 Aligned_cols=44 Identities=7% Similarity=-0.071 Sum_probs=35.5
Q ss_pred CCCCCCchhHHHHHHHHHHHHHhccCCCCCCCcceEEEEEeCCCCCCCcchH
Q 014338 238 SVGSDSNGSGVVALLEVARLFSLLYSNPKTRGRYNILFGLTSGGPYNYNGTH 289 (426)
Q Consensus 238 ~~GAddn~SG~a~LLElar~~~~l~~~~~~~p~~~I~F~~~~gEe~g~~GS~ 289 (426)
..++-||=.|+.++|++.+.+. .+.+++++++++-||.|..|++
T Consensus 256 ~s~~lDdr~~~~~~l~al~~~~--------~~~~~~~~~~~d~EEVGs~ga~ 299 (461)
T 2glj_A 256 MGYGQDDRICAYTSFEAMLEMK--------NAKKTCITILVDKEEVGSIGAT 299 (461)
T ss_dssp EETTHHHHHHHHHHHHHHHTCC--------SCSSCEEEEEECCGGGTCCTTT
T ss_pred EEecchhHHHHHHHHHHHHhhc--------cCCCeEEEEEEccCCCCCcccc
Confidence 4566789999999999877542 2467899999999999998875
Done!