BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014339
(426 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3GNO|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase
pdb|3GNP|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-Glucosidase With
Octyl-Beta- D-Thio-Glucoside
pdb|3GNR|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase With
Covalently Bound 2-deoxy-2-fluoroglucoside To The
Catalytic Nucleophile E396
Length = 488
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/409 (45%), Positives = 258/409 (63%), Gaps = 4/409 (0%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
M +G+++YRFSI+W+RI P G G VN GI+HYNKLIDALL KGIQP+VTL +D PQ
Sbjct: 79 MADMGMDAYRFSIAWSRIYPNG-VGQVNQAGIDHYNKLIDALLAKGIQPYVTLYHWDLPQ 137
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
+EDKY WL + +DF +A+ CF+ FGDRVK+W T+NEP+ Y G P C
Sbjct: 138 ALEDKYKGWLDRQIVDDFAAYAETCFREFGDRVKHWITLNEPHTVAIQGYDAGLQAPGRC 197
Query: 121 SQPFG-NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPIS 179
S C GNS EP++ AH+ IL+HA A IYRTKY+ Q G +GI + +WFEP+S
Sbjct: 198 SVLLHLYCKAGNSGTEPYVVAHHFILAHAAAASIYRTKYKATQNGQLGIAFDVMWFEPMS 257
Query: 180 SSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFIG 239
++T D AA+RAQ F + WF DP +G YPA M VG LP+F++ + +K LDF+G
Sbjct: 258 NTTIDIEAAKRAQEFQLGWFADPFFFGDYPATMRARVGERLPRFTADEAAVVKGALDFVG 317
Query: 240 INHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKI 299
INHYT+ Y + + + + + K+G P+G+ WL + P+GM +
Sbjct: 318 INHYTTYYTRHNNTNIIGTLLNNTLADTGTVSLPFKNGKPIGDRANSIWLYIVPRGMRSL 377
Query: 300 IKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVR-DGAD 358
+ Y+KERY + P++ITENG + P S +D L D KR++Y YL L +++ DG D
Sbjct: 378 MNYVKERYNSPPVYITENGMDDSNNPFISIKDALKDSKRIKYHNDYLTNLAASIKEDGCD 437
Query: 359 VRGYFVWSLLDSFEWTYGYTARFGLHHVDFA-TLKRTPKLSATWYKHFI 406
VRGYF WSLLD++EW GY++RFGL+ VD+ LKR PK S W+K +
Sbjct: 438 VRGYFAWSLLDNWEWAAGYSSRFGLYFVDYKDNLKRYPKNSVQWFKALL 486
>pdb|3PTK|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTK|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTM|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTM|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTQ|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
pdb|3PTQ|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
Length = 505
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/415 (46%), Positives = 258/415 (62%), Gaps = 13/415 (3%)
Query: 1 MESLGVNSYRFSISWARILPKGRF-GDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSP 59
M+ +G+++YRFSISW RILP G G VN EGI +YN LI+ LL KG+QPF+TL +DSP
Sbjct: 97 MKDMGMDAYRFSISWTRILPNGSLRGGVNKEGIKYYNNLINELLSKGVQPFITLFHWDSP 156
Query: 60 QEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAH 119
Q +EDKY +LSP DF +A+ICFK FGDRVK W T NEP + Y G P
Sbjct: 157 QALEDKYNGFLSPNIINDFKDYAEICFKEFGDRVKNWITFNEPWTFCSNGYATGLFAPGR 216
Query: 120 CSQPF--GNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEP 177
CS P+ GNCS G+S EP+ A H+ +L+HA V +Y+ KYQ Q G IGI L + WF P
Sbjct: 217 CS-PWEKGNCSVGDSGREPYTACHHQLLAHAETVRLYKAKYQALQKGKIGITLVSHWFVP 275
Query: 178 ISSSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDF 237
S S ++ AA+RA F WF+DP+I G YP M +VG+ LP+F+ + +K DF
Sbjct: 276 FSRSKSNNDAAKRAIDFMFGWFMDPLIRGDYPLSMRGLVGNRLPQFTKEQSKLVKGAFDF 335
Query: 238 IGINHYTSTYVQDCIFSACKPGPGASK---TEGFCLQNSQKHGVPLGEPTTLFWLNVYPQ 294
IG+N+YT+ Y + P G + T+ ++G+P+G WL VYPQ
Sbjct: 336 IGLNYYTANYADN-----LPPSNGLNNSYTTDSRANLTGVRNGIPIGPQAASPWLYVYPQ 390
Query: 295 GMWKIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVR 354
G ++ Y+KE Y N ++ITENG E ++ L D R+EY +L +L++A+R
Sbjct: 391 GFRDLLLYVKENYGNPTVYITENGVDEFNNKTLPLQEALKDDARIEYYHKHLLSLLSAIR 450
Query: 355 DGADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFAT-LKRTPKLSATWYKHFIAK 408
DGA+V+GYF WSLLD+FEW+ GYT RFG++ VD+ KR PK SA W+K F+ K
Sbjct: 451 DGANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYNDGRKRYPKNSAHWFKKFLLK 505
>pdb|2RGL|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGL|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
Length = 481
Score = 366 bits (940), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/409 (45%), Positives = 257/409 (62%), Gaps = 9/409 (2%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
M+SL ++YRFSISW+RI P G G VN EG+ +YN LI+ LL KGI P+V L +D P
Sbjct: 82 MKSLNFDAYRFSISWSRIFPDGE-GRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPL 140
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
+E KYG WL+ + + F +AD CFK+FG+RVK+WFT NEP + L Y G +PP C
Sbjct: 141 ALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRC 200
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
++ + GNS EP+I AHN +LSHA AV YRTKYQ Q G +GI+L+ W+E +S+
Sbjct: 201 TKC---AAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALSN 257
Query: 181 STADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFIGI 240
ST D+ AA+RA+ F++ W+LDP+I G YP M ++V LPKF+ +K D+IGI
Sbjct: 258 STEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIGI 317
Query: 241 NHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKII 300
N YT++Y++ + P + + K+G P+G WL + P GM+ +
Sbjct: 318 NQYTASYMKGQ--QLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYGCV 375
Query: 301 KYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADVR 360
YIK++Y N + ITENG + N S + L D RV + SYL L A+ +GA+V
Sbjct: 376 NYIKQKYGNPTVVITENGMDQPA--NLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGANVA 433
Query: 361 GYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAKH 409
GYF WSLLD+FEW GYT++FG+ +VDF TL+R PK SA W++ + KH
Sbjct: 434 GYFAWSLLDNFEWLSGYTSKFGIVYVDFNTLERHPKASAYWFRDML-KH 481
>pdb|3F4V|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F4V|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3AHT|A Chain A, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHT|B Chain B, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHV|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
pdb|3AHV|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
Length = 481
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/409 (44%), Positives = 257/409 (62%), Gaps = 9/409 (2%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
M+SL ++YRFSISW+RI P G G VN EG+ +YN LI+ LL KGI P+V L +D P
Sbjct: 82 MKSLNFDAYRFSISWSRIFPDGE-GRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPL 140
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
+E KYG WL+ + + F +AD CFK+FG+RVK+WFT N+P + L Y G +PP C
Sbjct: 141 ALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNQPRIVALLGYDQGTNPPKRC 200
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
++ + GNS EP+I AHN +LSHA AV YRTKYQ Q G +GI+L+ W+E +S+
Sbjct: 201 TKC---AAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALSN 257
Query: 181 STADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFIGI 240
ST D+ AA+RA+ F++ W+LDP+I G YP M ++V LPKF+ +K D+IGI
Sbjct: 258 STEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIGI 317
Query: 241 NHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKII 300
N YT++Y++ + P + + K+G P+G WL + P GM+ +
Sbjct: 318 NQYTASYMKGQ--QLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYGCV 375
Query: 301 KYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADVR 360
YIK++Y N + ITENG + N S + L D RV + SYL L A+ +GA+V
Sbjct: 376 NYIKQKYGNPTVVITENGMDQPA--NLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGANVA 433
Query: 361 GYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAKH 409
GYF WSLLD+FEW GYT++FG+ +VDF TL+R PK SA W++ + KH
Sbjct: 434 GYFAWSLLDNFEWLSGYTSKFGIVYVDFNTLERHPKASAYWFRDML-KH 481
>pdb|3SCV|A Chain A, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCV|B Chain B, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/409 (45%), Positives = 256/409 (62%), Gaps = 9/409 (2%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
M+SL ++YRFSISW+RI P G G VN EG+ +YN LI+ LL KGI P+V L +D P
Sbjct: 82 MKSLNFDAYRFSISWSRIFPDGE-GRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPL 140
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
+E KYG WL+ + + F +AD CFK+FG+RVK+WFT NEP + L Y G +PP C
Sbjct: 141 ALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRC 200
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
++ + GNS EP+I AHN +LSHA AV YRTKYQ Q G +GI+L+ W+E +S+
Sbjct: 201 TKC---AAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALSN 257
Query: 181 STADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFIGI 240
ST D+ AA+RA+ F++ W+LDP+I G YP M ++V LPKF+ +K D+IGI
Sbjct: 258 STEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIGI 317
Query: 241 NHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKII 300
N YT++Y++ P A+ + K+G P+G WL + P GM+ +
Sbjct: 318 NQYTASYMKGQQLMQQTPTSYAADWQ--VTYVFAKNGKPIGPQANSNWLYIVPWGMYGCV 375
Query: 301 KYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADVR 360
YIK++Y N + IT NG + N S + L D RV + SYL L A+ +GA+V
Sbjct: 376 NYIKQKYGNPTVVITGNGMDQPA--NLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGANVA 433
Query: 361 GYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAKH 409
GYF WSLLD+FEW GYT++FG+ +VDF TL+R PK SA W++ + KH
Sbjct: 434 GYFAWSLLDNFEWLSGYTSKFGIVYVDFNTLERHPKASAYWFRDML-KH 481
>pdb|3SCP|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCP|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCQ|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCQ|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/409 (44%), Positives = 256/409 (62%), Gaps = 9/409 (2%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
M+SL ++YRFSISW+RI P G G VN EG+ +YN LI+ LL KGI P+V L +D P
Sbjct: 82 MKSLNFDAYRFSISWSRIFPDGE-GRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPL 140
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
+E KYG WL+ + + F +AD CFK+FG+RVK+WFT NEP + L Y G +PP C
Sbjct: 141 ALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRC 200
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
++ + GNS EP+I AHN +LSHA AV YRTKYQ Q G +GI+L+ W+E +S+
Sbjct: 201 TKC---AAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALSN 257
Query: 181 STADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFIGI 240
ST D+ AA+RA+ F++ W+LDP+I G YP M ++V LPKF+ +K D+IGI
Sbjct: 258 STEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIGI 317
Query: 241 NHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKII 300
N YT++Y++ + P + + K+G P+G WL + P GM+ +
Sbjct: 318 NQYTASYMKGQ--QLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYGCV 375
Query: 301 KYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADVR 360
YIK++Y N + IT NG + N S + L D RV + SYL L A+ +GA+V
Sbjct: 376 NYIKQKYGNPTVVITANGMDQPA--NLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGANVA 433
Query: 361 GYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAKH 409
GYF WSLLD+FEW GYT++FG+ +VDF TL+R PK SA W++ + KH
Sbjct: 434 GYFAWSLLDNFEWLSGYTSKFGIVYVDFNTLERHPKASAYWFRDML-KH 481
>pdb|3SCR|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCR|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCS|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCS|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/409 (44%), Positives = 256/409 (62%), Gaps = 9/409 (2%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
M+SL ++YRFSISW+RI P G G VN EG+ +YN LI+ LL KGI P+V L +D P
Sbjct: 82 MKSLNFDAYRFSISWSRIFPDGE-GRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPL 140
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
+E KYG WL+ + + F +AD CFK+FG+RVK+WFT NEP + L Y G +PP C
Sbjct: 141 ALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRC 200
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
++ + GNS EP+I AHN +LSHA AV YRTKYQ Q G +GI+L+ W+E +S+
Sbjct: 201 TKC---AAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALSN 257
Query: 181 STADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFIGI 240
ST D+ AA+RA+ F++ W+LDP+I G YP M ++V LPKF+ +K D+IGI
Sbjct: 258 STEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIGI 317
Query: 241 NHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKII 300
N YT++Y++ + P + + K+G P+G WL + P GM+ +
Sbjct: 318 NQYTASYMKGQ--QLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYGCV 375
Query: 301 KYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADVR 360
YIK++Y N + IT NG + N S + L D RV + SYL L A+ +GA+V
Sbjct: 376 NYIKQKYGNPTVVITSNGMDQPA--NLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGANVA 433
Query: 361 GYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAKH 409
GYF WSLLD+FEW GYT++FG+ +VDF TL+R PK SA W++ + KH
Sbjct: 434 GYFAWSLLDNFEWLSGYTSKFGIVYVDFNTLERHPKASAYWFRDML-KH 481
>pdb|3SCW|A Chain A, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCW|B Chain B, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 364 bits (935), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/409 (44%), Positives = 257/409 (62%), Gaps = 9/409 (2%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
M+SL ++YRFSISW+RI P G G VN EG+ +YN LI+ LL KGI P+V L +D P
Sbjct: 82 MKSLNFDAYRFSISWSRIFPDGE-GRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPL 140
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
+E KYG WL+ + + F +AD CFK+FG+RVK+WFT NEP + L Y G +PP C
Sbjct: 141 ALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRC 200
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
++ + GNS EP+I AHN +LSHA AV YRTKYQ Q G +GI+L+ W+E +S+
Sbjct: 201 TKC---AAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALSN 257
Query: 181 STADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFIGI 240
ST D+ AA+RA+ F++ W+LDP+I G YP M ++V LPKF+ +K D+IGI
Sbjct: 258 STEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIGI 317
Query: 241 NHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKII 300
N YT++Y++ P ++ + + K+G P+G WL + P GM+ +
Sbjct: 318 NQYTASYMKGQQLMQQTPTSYSADWQVTAV--FAKNGKPIGPQANSNWLYIVPWGMYGCV 375
Query: 301 KYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADVR 360
YIK++Y N + IT NG + N S + L D RV + SYL L A+ +GA+V
Sbjct: 376 NYIKQKYGNPTVVITGNGMDQPA--NLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGANVA 433
Query: 361 GYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAKH 409
GYF WSLLD+FEW GYT++FG+ +VDF TL+R PK SA W++ + KH
Sbjct: 434 GYFAWSLLDNFEWLSGYTSKFGIVYVDFNTLERHPKASAYWFRDML-KH 481
>pdb|3SCN|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCN|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCO|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCO|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCT|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCT|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCU|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
pdb|3SCU|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
Length = 481
Score = 363 bits (933), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/409 (44%), Positives = 256/409 (62%), Gaps = 9/409 (2%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
M+SL ++YRFSISW+RI P G G VN EG+ +YN LI+ LL KGI P+V L +D P
Sbjct: 82 MKSLNFDAYRFSISWSRIFPDGE-GRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPL 140
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
+E KYG WL+ + + F +AD CFK+FG+RVK+WFT NEP + L Y G +PP C
Sbjct: 141 ALEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRC 200
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
++ + GNS EP+I AHN +LSHA AV YRTKYQ Q G +GI+L+ W+E +S+
Sbjct: 201 TKC---AAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALSN 257
Query: 181 STADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFIGI 240
ST D+ AA+RA+ F++ W+LDP+I G YP M ++V LPKF+ +K D+IGI
Sbjct: 258 STEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIGI 317
Query: 241 NHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKII 300
N YT++Y++ + P + + K+G P+G WL + P GM+ +
Sbjct: 318 NQYTASYMKGQ--QLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYGCV 375
Query: 301 KYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADVR 360
YIK++Y N + IT NG + N S + L D RV + SYL L A+ +GA+V
Sbjct: 376 NYIKQKYGNPTVVITGNGMDQPA--NLSRDQYLRDTTRVHFYRSYLTQLKKAIDEGANVA 433
Query: 361 GYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAKH 409
GYF WSLLD+FEW GYT++FG+ +VDF TL+R PK SA W++ + KH
Sbjct: 434 GYFAWSLLDNFEWLSGYTSKFGIVYVDFNTLERHPKASAYWFRDML-KH 481
>pdb|1CBG|A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase
From White Clover (Trifolium Repens L.), A Family 1
Glycosyl-Hydrolase
Length = 490
Score = 347 bits (890), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 183/412 (44%), Positives = 254/412 (61%), Gaps = 7/412 (1%)
Query: 1 MESLGVNSYRFSISWARILPKGRF-GDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSP 59
M+ + +++YRFSISW R+LPKG+ G VN EGIN+YN LI+ +L G+QP+VTL +D P
Sbjct: 82 MKDMNLDAYRFSISWPRVLPKGKLSGGVNREGINYYNNLINEVLANGMQPYVTLFHWDVP 141
Query: 60 QEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAH 119
Q +ED+Y +L +DF +A++CFK FGDRVK+W T+NEP +Y G P
Sbjct: 142 QALEDEYRGFLGRNIVDDFRDYAELCFKEFGDRVKHWITLNEPWGVSMNAYAYGTFAPGR 201
Query: 120 CSQPFG-NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPI 178
CS NC+ G+S EP++AAH +L+HA A +Y+TKYQ Q G IGI L + WFEP
Sbjct: 202 CSDWLKLNCTGGDSGREPYLAAHYQLLAHAAAARLYKTKYQASQNGIIGITLVSHWFEPA 261
Query: 179 SSSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFI 238
S AD AA+R F + WF+ P+ G+YP M +V LPKFS+ + ++L DF+
Sbjct: 262 SKEKADVDAAKRGLDFMLGWFMHPLTKGRYPESMRYLVRKRLPKFSTEESKELTGSFDFL 321
Query: 239 GINHYTSTYVQDC-IFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMW 297
G+N+Y+S Y +P A +T+ + +G PLG WL +YPQG+
Sbjct: 322 GLNYYSSYYAAKAPRIPNARP---AIQTDSLINATFEHNGKPLGPMAASSWLCIYPQGIR 378
Query: 298 KIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGA 357
K++ Y+K Y N ++ITENG E P S ++ L D R++Y +L ++TA+ DG
Sbjct: 379 KLLLYVKNHYNNPVIYITENGRNEFNDPTLSLQESLLDTPRIDYYYRHLYYVLTAIGDGV 438
Query: 358 DVRGYFVWSLLDSFEWTYGYTARFGLHHVDFA-TLKRTPKLSATWYKHFIAK 408
+V+GYF WSL D+ EW GYT RFGL VDF LKR PKLSA W+K F+ K
Sbjct: 439 NVKGYFAWSLFDNMEWDSGYTVRFGLVFVDFKNNLKRHPKLSAHWFKSFLKK 490
>pdb|2JF6|A Chain A, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF6|B Chain B, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF7|A Chain A, Structure Of Strictosidine Glucosidase
pdb|2JF7|B Chain B, Structure Of Strictosidine Glucosidase
Length = 532
Score = 342 bits (878), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 171/408 (41%), Positives = 247/408 (60%), Gaps = 7/408 (1%)
Query: 1 MESLGVNSYRFSISWARILPKGRFG-DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSP 59
M+ G+ SYRFSISW+R+LP GR VN +G+ Y+ ID LL GI+P VTL +D P
Sbjct: 106 MKQTGLESYRFSISWSRVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSVTLFHWDLP 165
Query: 60 QEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAH 119
Q +ED+YG +LS +DF +A+ CF FGD++KYW T NEP+ Y LG P
Sbjct: 166 QALEDEYGGFLSHRIVDDFCEYAEFCFWEFGDKIKYWTTFNEPHTFAVNGYALGEFAPGR 225
Query: 120 CSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPIS 179
G +G+ EP++ HN++L+H AV+ YR K+QK Q G IGI+LN++W EP+S
Sbjct: 226 G----GKGDEGDPAIEPYVVTHNILLAHKAAVEEYRNKFQKCQEGEIGIVLNSMWMEPLS 281
Query: 180 SSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFIG 239
AD A +RA F + WFL+P+ G YP M +V LPKFS+ D EKLK DFIG
Sbjct: 282 DVQADIDAQKRALDFMLGWFLEPLTTGDYPKSMRELVKGRLPKFSADDSEKLKGCYDFIG 341
Query: 240 INHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKI 299
+N+YT+TYV + + S + + +T+ + +++ P+G W +V P G++K+
Sbjct: 342 MNYYTATYVTNAVKSNSE--KLSYETDDQVTKTFERNQKPIGHALYGGWQHVVPWGLYKL 399
Query: 300 IKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADV 359
+ Y KE Y +++TE+G E + D +R +Y +L ++ A+ DG +V
Sbjct: 400 LVYTKETYHVPVLYVTESGMVEENKTKILLSEARRDAERTDYHQKHLASVRDAIDDGVNV 459
Query: 360 RGYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIA 407
+GYFVWS D+FEW GY R+G+ HVD+ + +R PK SA WYK+FIA
Sbjct: 460 KGYFVWSFFDNFEWNLGYICRYGIIHVDYKSFERYPKESAIWYKNFIA 507
>pdb|3AIU|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye
pdb|3AIV|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With An Aglycone Dimboa
pdb|3AIW|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With 2-Deoxy-2- Fluoroglucoside And Dinitrophenol
Length = 564
Score = 328 bits (842), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 163/409 (39%), Positives = 255/409 (62%), Gaps = 8/409 (1%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
++ +G+ YRFSISW+RILP G G N +GI++YN LI++L+ GI P+VT+ +D+PQ
Sbjct: 137 LKDMGMKVYRFSISWSRILPNGT-GKPNQKGIDYYNNLINSLIRHGIVPYVTIWHWDTPQ 195
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
+EDKYG +L + D+ YFA++CF+SFGDRVK WFT NEP+ SY G H P C
Sbjct: 196 ALEDKYGGFLDKQIVNDYKYFAELCFQSFGDRVKNWFTFNEPHTYCCFSYGEGIHAPGRC 255
Query: 121 SQPFGNCS--QGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPI 178
S P +C+ +G+S EP+ A H+++L+HA AV++++ Y K IG+ + + +EP
Sbjct: 256 S-PGLDCAVPEGDSLREPYTAGHHILLAHAEAVELFKAHYNKHGDSKIGMAFDVMGYEPY 314
Query: 179 SSSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFI 238
S D A ER+ + M WFL+P++ G YP M +++G LP F+ ++EKL D +
Sbjct: 315 QDSFLDDQARERSIDYNMGWFLEPVVRGDYPFSMRSLIGDRLPMFTKEEQEKLASSCDIM 374
Query: 239 GINHYTSTYVQDCIFSACKPGPGASKTEGFC-LQNSQKHGVPLGEPTTLFWLNVYPQGMW 297
G+N+YTS + + S+ P + + + + + G +G T +W+ +YP+G+
Sbjct: 375 GLNYYTSRFSKHVDISSDYT-PTLNTDDAYASSETTGSDGNEIGPITGTYWIYMYPKGLT 433
Query: 298 KIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGA 357
++ +KE+Y N P+FITENG ++ + D L+D KR++Y+ ++ A+ A+ GA
Sbjct: 434 DLLLIMKEKYGNPPIFITENGIADV-EGDPEMPDPLDDWKRLDYLQRHISAVKDAIDQGA 492
Query: 358 DVRGYFVWSLLDSFEWTYGYTARFGLHHVDFAT-LKRTPKLSATWYKHF 405
DVRG+F W L+D+FEW GY++RFGL ++D KR K SA W+ F
Sbjct: 493 DVRGHFTWGLIDNFEWGSGYSSRFGLVYIDKEDGNKRKLKKSAKWFAKF 541
>pdb|2DGA|A Chain A, Crystal Structure Of Hexameric Beta-Glucosidase In Wheat
pdb|3AIQ|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With An Aglycone Dimboa
pdb|3AIR|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With 2-Deoxy- 2-Fluoroglucoside And Dinitrophenol
Length = 565
Score = 328 bits (841), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 163/409 (39%), Positives = 256/409 (62%), Gaps = 8/409 (1%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
++ +G+ YRFSISW+RILP G G VN GI++YNKLI++L+ I P+VT+ +D+PQ
Sbjct: 137 LKDMGMKVYRFSISWSRILPDGT-GKVNQAGIDYYNKLINSLIDNDIVPYVTIWHWDTPQ 195
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
+EDKYG +L+ + +D+ FA++CFK+FGDRVK WFT NEP+ SY G H P C
Sbjct: 196 ALEDKYGGFLNRQIVDDYKQFAEVCFKNFGDRVKNWFTFNEPHTYCCFSYGEGIHAPGRC 255
Query: 121 SQPFGNCS--QGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPI 178
S P +C+ +G+S EP+ A H+++L+HA AV +++ +Y IG+ + + +EP
Sbjct: 256 S-PGMDCAVPEGDSLREPYTAGHHILLAHAEAVQLFKARYNMHGDSKIGMAFDVMGYEPY 314
Query: 179 SSSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFI 238
S D A ER+ + M WFL+P++ G YP M +++G LP F+ ++EKL D +
Sbjct: 315 QDSFLDDQARERSIDYNMGWFLEPVVRGDYPFSMRSLIGDRLPMFTKEEQEKLASSCDIM 374
Query: 239 GINHYTSTYVQDCIFSACKPGPGASKTEGFC-LQNSQKHGVPLGEPTTLFWLNVYPQGMW 297
G+N+YTS + + S P + + + + + G +G T +W+ +YP+G+
Sbjct: 375 GLNYYTSRFSKHVDMSP-DFTPTLNTDDAYASSETTGSDGNDIGPITGTYWIYMYPKGLT 433
Query: 298 KIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGA 357
++ +KE+Y N P+FITENG ++ + S D L+D KR++Y+ ++ A+ A+ GA
Sbjct: 434 DLLLIMKEKYGNPPVFITENGIADV-EGDESMPDPLDDWKRLDYLQRHISAVKDAIDQGA 492
Query: 358 DVRGYFVWSLLDSFEWTYGYTARFGLHHVDFAT-LKRTPKLSATWYKHF 405
DVRG+F W L+D+FEW+ GY++RFGL ++D KR K SA W+ F
Sbjct: 493 DVRGHFTWGLIDNFEWSLGYSSRFGLVYIDKNDGNKRKLKKSAKWFSKF 541
>pdb|3AIS|A Chain A, Crystal Structure Of A Mutant Beta-Glucosidase In Wheat
Complexed With Dimboa-Glc
Length = 565
Score = 326 bits (835), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 162/409 (39%), Positives = 255/409 (62%), Gaps = 8/409 (1%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
++ +G+ YRFSISW+RILP G G VN GI++YNKLI++L+ I P+VT+ +D+PQ
Sbjct: 137 LKDMGMKVYRFSISWSRILPDGT-GKVNQAGIDYYNKLINSLIDNDIVPYVTIWHWDTPQ 195
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
+EDKYG +L+ + +D+ FA++CFK+FGDRVK WFT N P+ SY G H P C
Sbjct: 196 ALEDKYGGFLNRQIVDDYKQFAEVCFKNFGDRVKNWFTFNAPHTYCCFSYGEGIHAPGRC 255
Query: 121 SQPFGNCS--QGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPI 178
S P +C+ +G+S EP+ A H+++L+HA AV +++ +Y IG+ + + +EP
Sbjct: 256 S-PGMDCAVPEGDSLREPYTAGHHILLAHAEAVQLFKARYNMHGDSKIGMAFDVMGYEPY 314
Query: 179 SSSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFI 238
S D A ER+ + M WFL+P++ G YP M +++G LP F+ ++EKL D +
Sbjct: 315 QDSFLDDQARERSIDYNMGWFLEPVVRGDYPFSMRSLIGDRLPMFTKEEQEKLASSCDIM 374
Query: 239 GINHYTSTYVQDCIFSACKPGPGASKTEGFC-LQNSQKHGVPLGEPTTLFWLNVYPQGMW 297
G+N+YTS + + S P + + + + + G +G T +W+ +YP+G+
Sbjct: 375 GLNYYTSRFSKHVDMSP-DFTPTLNTDDAYASSETTGSDGNDIGPITGTYWIYMYPKGLT 433
Query: 298 KIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGA 357
++ +KE+Y N P+FITENG ++ + S D L+D KR++Y+ ++ A+ A+ GA
Sbjct: 434 DLLLIMKEKYGNPPVFITENGIADV-EGDESMPDPLDDWKRLDYLQRHISAVKDAIDQGA 492
Query: 358 DVRGYFVWSLLDSFEWTYGYTARFGLHHVDFAT-LKRTPKLSATWYKHF 405
DVRG+F W L+D+FEW+ GY++RFGL ++D KR K SA W+ F
Sbjct: 493 DVRGHFTWGLIDNFEWSLGYSSRFGLVYIDKNDGNKRKLKKSAKWFSKF 541
>pdb|4A3Y|A Chain A, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
pdb|4A3Y|B Chain B, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
Length = 540
Score = 324 bits (830), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 176/422 (41%), Positives = 252/422 (59%), Gaps = 21/422 (4%)
Query: 1 MESLGVNSYRFSISWARILPKGRF-GDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSP 59
+++LG+++YRFSISW+R+LP GR G VN EGIN+YN LID LL GI+PFVTL +D P
Sbjct: 85 LKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHWDVP 144
Query: 60 QEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAH 119
Q +ED+YG +LSP +DF +A++CF FGDRVK+W T+NEP Y G + P
Sbjct: 145 QALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNEPWTFSVHGYATGLYAPGR 204
Query: 120 ----------------CS--QPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKD 161
CS P CS GN EP+ H+L+L+HA AV++Y+ K+Q+
Sbjct: 205 GRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAHAAAVELYKNKFQRG 264
Query: 162 QGGSIGIILNTLWFEPISSSTA-DKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTL 220
Q G IGI T W EP ++A D AA RA F + WF++PI G YP M VGS L
Sbjct: 265 QEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITSGDYPKSMKKFVGSRL 324
Query: 221 PKFSSRDKEKLKQGLDFIGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPL 280
PKFS + LK DF+G+N+YT++YV + ++ + T+ + ++GVP+
Sbjct: 325 PKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNSSGSNNFSYNTDIHVTYETDRNGVPI 384
Query: 281 GEPTTLFWLNVYPQGMWKIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVE 340
G + WL +YP+G+ KI+ Y K+ Y +++TENG ++ N + + D R++
Sbjct: 385 GPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENGVDDVKNTNLTLSEARKDSMRLK 444
Query: 341 YMASYLDALITAVRDGADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFA-TLKRTPKLSA 399
Y+ ++ + A+ DG +V+GYF WSLLD+FEW GY RFG+ H+D+ R PK SA
Sbjct: 445 YLQDHIFNVRQAMNDGVNVKGYFAWSLLDNFEWGEGYGVRFGIIHIDYNDNFARYPKDSA 504
Query: 400 TW 401
W
Sbjct: 505 VW 506
>pdb|4ATD|A Chain A, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATD|B Chain B, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATL|A Chain A, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
pdb|4ATL|B Chain B, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
Length = 513
Score = 324 bits (830), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 176/422 (41%), Positives = 252/422 (59%), Gaps = 21/422 (4%)
Query: 1 MESLGVNSYRFSISWARILPKGRF-GDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSP 59
+++LG+++YRFSISW+R+LP GR G VN EGIN+YN LID LL GI+PFVTL +D P
Sbjct: 85 LKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHWDVP 144
Query: 60 QEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAH 119
Q +ED+YG +LSP +DF +A++CF FGDRVK+W T+NEP Y G + P
Sbjct: 145 QALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNEPWTFSVHGYATGLYAPGR 204
Query: 120 ----------------CS--QPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKD 161
CS P CS GN EP+ H+L+L+HA AV++Y+ K+Q+
Sbjct: 205 GRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAHAAAVELYKNKFQRG 264
Query: 162 QGGSIGIILNTLWFEPISSSTA-DKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTL 220
Q G IGI T W EP ++A D AA RA F + WF++PI G YP M VGS L
Sbjct: 265 QEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITSGDYPKSMKKFVGSRL 324
Query: 221 PKFSSRDKEKLKQGLDFIGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPL 280
PKFS + LK DF+G+N+YT++YV + ++ + T+ + ++GVP+
Sbjct: 325 PKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNSSGSNNFSYNTDIHVTYETDRNGVPI 384
Query: 281 GEPTTLFWLNVYPQGMWKIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVE 340
G + WL +YP+G+ KI+ Y K+ Y +++TENG ++ N + + D R++
Sbjct: 385 GPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENGVDDVKNTNLTLSEARKDSMRLK 444
Query: 341 YMASYLDALITAVRDGADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFA-TLKRTPKLSA 399
Y+ ++ + A+ DG +V+GYF WSLLD+FEW GY RFG+ H+D+ R PK SA
Sbjct: 445 YLQDHIFNVRQAMNDGVNVKGYFAWSLLDNFEWGEGYGVRFGIIHIDYNDNFARYPKDSA 504
Query: 400 TW 401
W
Sbjct: 505 VW 506
>pdb|3U57|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U57|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|4EK7|A Chain A, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
pdb|4EK7|B Chain B, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
Length = 513
Score = 322 bits (826), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 175/422 (41%), Positives = 252/422 (59%), Gaps = 21/422 (4%)
Query: 1 MESLGVNSYRFSISWARILPKGRF-GDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSP 59
+++LG+++YRFSISW+R+LP GR G VN EGIN+YN LID LL GI+PFVTL +D P
Sbjct: 85 LKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHWDVP 144
Query: 60 QEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAH 119
Q +ED+YG +LSP +DF +A++CF FGDRVK+W T+N+P Y G + P
Sbjct: 145 QALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNQPWTFSVHGYATGLYAPGR 204
Query: 120 ----------------CS--QPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKD 161
CS P CS GN EP+ H+L+L+HA AV++Y+ K+Q+
Sbjct: 205 GRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAHAAAVELYKNKFQRG 264
Query: 162 QGGSIGIILNTLWFEPISSSTA-DKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTL 220
Q G IGI T W EP ++A D AA RA F + WF++PI G YP M VGS L
Sbjct: 265 QEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITSGDYPKSMKKFVGSRL 324
Query: 221 PKFSSRDKEKLKQGLDFIGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPL 280
PKFS + LK DF+G+N+YT++YV + ++ + T+ + ++GVP+
Sbjct: 325 PKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNSSGSNNFSYNTDIHVTYETDRNGVPI 384
Query: 281 GEPTTLFWLNVYPQGMWKIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVE 340
G + WL +YP+G+ KI+ Y K+ Y +++TENG ++ N + + D R++
Sbjct: 385 GPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENGVDDVKNTNLTLSEARKDSMRLK 444
Query: 341 YMASYLDALITAVRDGADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFA-TLKRTPKLSA 399
Y+ ++ + A+ DG +V+GYF WSLLD+FEW GY RFG+ H+D+ R PK SA
Sbjct: 445 YLQDHIFNVRQAMNDGVNVKGYFAWSLLDNFEWGEGYGVRFGIIHIDYNDNFARYPKDSA 504
Query: 400 TW 401
W
Sbjct: 505 VW 506
>pdb|1V02|E Chain E, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 322 bits (826), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 171/420 (40%), Positives = 249/420 (59%), Gaps = 8/420 (1%)
Query: 1 MESLGVNSYRFSISWARILPKGRF-GDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSP 59
++ +G+++YRFSISW RILPKG G +N + + +YNKLID LL GI+P++T+ +D+P
Sbjct: 139 LKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFHWDTP 198
Query: 60 QEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAH 119
Q + D YG +L +D+ FA +CF+ FG +VK W T NEP ++SY G P
Sbjct: 199 QALVDAYGGFLDERIIKDYTDFAKVCFEKFGKKVKNWLTFNEPETFCSVSYGTGVLAPGR 258
Query: 120 CSQPFGNCS--QGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEP 177
CS P +C+ GNS EP+I AHNL+ +HA VDIY KY K G IG+ LN P
Sbjct: 259 CS-PGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIY-NKYHKGADGRIGLALNVFGRVP 316
Query: 178 ISSSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDF 237
+++ D+ A ER+ + WFL+P++ G YP M +P F +++EKL D
Sbjct: 317 YTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVSARDRVPYFKEKEQEKLVGSYDM 376
Query: 238 IGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQ-KHGVPLGEPTTLFWLNVYPQGM 296
IGIN+YTST+ + S P + + + Q ++ G +G PT W+N+YP+G+
Sbjct: 377 IGINYYTSTFSKHIDLSPNN-SPVLNTDDAYASQETKGPDGNAIGPPTGNAWINMYPKGL 435
Query: 297 WKIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDG 356
I+ +K +Y N PM+ITENG G+I + L D R++Y+ +L L ++ G
Sbjct: 436 HDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQRHLSVLKQSIDLG 495
Query: 357 ADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFAT-LKRTPKLSATWYKHFIAKHKLIKSQ 415
ADVRGYF WSLLD+FEW+ GYT RFG+ +VD +RT K SA W + F K +++
Sbjct: 496 ADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENGCERTMKRSARWLQEFNGAAKKVENN 555
>pdb|1V02|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|B Chain B, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|C Chain C, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|D Chain D, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|F Chain F, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 321 bits (823), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 171/420 (40%), Positives = 248/420 (59%), Gaps = 8/420 (1%)
Query: 1 MESLGVNSYRFSISWARILPKGRF-GDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSP 59
++ +G+++YRFSISW RILPKG G +N + + +YNKLID LL GI+P++T+ +D+P
Sbjct: 139 LKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFHWDTP 198
Query: 60 QEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAH 119
Q + D YG +L +D+ FA +CF+ FG VK W T NEP ++SY G P
Sbjct: 199 QALVDAYGGFLDERIIKDYTDFAKVCFEKFGKTVKNWLTFNEPETFCSVSYGTGVLAPGR 258
Query: 120 CSQPFGNCS--QGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEP 177
CS P +C+ GNS EP+I AHNL+ +HA VDIY KY K G IG+ LN P
Sbjct: 259 CS-PGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIY-NKYHKGADGRIGLALNVFGRVP 316
Query: 178 ISSSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDF 237
+++ D+ A ER+ + WFL+P++ G YP M +P F +++EKL D
Sbjct: 317 YTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVSARDRVPYFKEKEQEKLVGSYDM 376
Query: 238 IGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQ-KHGVPLGEPTTLFWLNVYPQGM 296
IGIN+YTST+ + S P + + + Q ++ G +G PT W+N+YP+G+
Sbjct: 377 IGINYYTSTFSKHIDLSPNN-SPVLNTDDAYASQETKGPDGNAIGPPTGNAWINMYPKGL 435
Query: 297 WKIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDG 356
I+ +K +Y N PM+ITENG G+I + L D R++Y+ +L L ++ G
Sbjct: 436 HDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQRHLSVLKQSIDLG 495
Query: 357 ADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFAT-LKRTPKLSATWYKHFIAKHKLIKSQ 415
ADVRGYF WSLLD+FEW+ GYT RFG+ +VD +RT K SA W + F K +++
Sbjct: 496 ADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENGCERTMKRSARWLQEFNGAAKKVENN 555
>pdb|1V03|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 321 bits (823), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 170/420 (40%), Positives = 249/420 (59%), Gaps = 8/420 (1%)
Query: 1 MESLGVNSYRFSISWARILPKGRF-GDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSP 59
++ +G+++YRFSISW RILPKG G +N +G+ +YNKLID LL GI+P++T+ +D+P
Sbjct: 139 LKEMGMDAYRFSISWPRILPKGTLAGGINEKGVEYYNKLIDLLLENGIEPYITIFHWDTP 198
Query: 60 QEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAH 119
Q + + YG +L +D+ FA +CF+ FG VK W T N+P ++SY G P
Sbjct: 199 QALVEAYGGFLDERIIKDYTDFAKVCFEKFGKTVKNWLTFNDPETFCSVSYGTGVLAPGR 258
Query: 120 CSQPFGNCS--QGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEP 177
CS P +C+ GNS EP+I AHNL+ +HA VDIY KY K G IG+ LN P
Sbjct: 259 CS-PGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIY-NKYHKGADGRIGLALNVFGRVP 316
Query: 178 ISSSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDF 237
+++ D+ A ER+ + WFL+P++ G YP M +P F +++EKL D
Sbjct: 317 YTNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVSARDRVPYFKEKEQEKLVGSYDM 376
Query: 238 IGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQ-KHGVPLGEPTTLFWLNVYPQGM 296
IGIN+YTST+ + S P + + + Q ++ G +G PT W+N+YP+G+
Sbjct: 377 IGINYYTSTFSKHIDLSPNN-SPVLNTDDAYASQETKGPDGNAIGPPTGNAWINMYPKGL 435
Query: 297 WKIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDG 356
I+ +K +Y N PM+ITENG G+I + L D R++Y+ +L L ++ G
Sbjct: 436 HDILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQRHLSVLKQSIDLG 495
Query: 357 ADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFAT-LKRTPKLSATWYKHFIAKHKLIKSQ 415
ADVRGYF WSLLD+FEW+ GYT RFG+ +VD +RT K SA W + F K +++
Sbjct: 496 ADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENGCERTMKRSARWLQEFNGAAKKVENN 555
>pdb|2E3Z|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E3Z|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E40|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
pdb|2E40|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
Length = 465
Score = 313 bits (803), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/416 (41%), Positives = 244/416 (58%), Gaps = 31/416 (7%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGD-VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSP 59
++S GV +YRFS+SW+RI+PKG D VN GI HY LI+ L+ +GI PFVTL +D P
Sbjct: 71 LKSYGVKAYRFSLSWSRIIPKGGRSDPVNGAGIKHYRTLIEELVKEGITPFVTLYHWDLP 130
Query: 60 QEIEDKYGAWLSPESQ-EDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPA 118
Q ++D+YG WL+ E +DF +A +CF+SFGD V+ W T NEP + + Y G P
Sbjct: 131 QALDDRYGGWLNKEEAIQDFTNYAKLCFESFGDLVQNWITFNEPWVISVMGYGNGIFAPG 190
Query: 119 HCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPI 178
H S EP+I +H++IL+HA AV +YR ++++ QGG IGI L++ W P
Sbjct: 191 HVSNT-----------EPWIVSHHIILAHAHAVKLYRDEFKEKQGGQIGITLDSHWLIPY 239
Query: 179 SSSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFI 238
+ A K A RA F + F +PI G+YP + I+G LP+F+ + E +K DF
Sbjct: 240 DDTDASKEATLRAMEFKLGRFANPIYKGEYPPRIKKILGDRLPEFTPEEIELVKGSSDFF 299
Query: 239 GINHYTSTYVQDCIFSACKPGPGASKTEGFC-LQNSQKHGVPLGEPTTLFWLNVYPQGMW 297
G+N YT+ VQD G+ + GF +++ G LG + + WL Y G
Sbjct: 300 GLNTYTTHLVQDG---------GSDELAGFVKTGHTRADGTQLGTQSDMGWLQTYGPGFR 350
Query: 298 KIIKYIKERYKNTPMFITENGY---GEICMPNSSTEDLLNDVKRVEYMASYLDALITAV- 353
++ Y+ + Y + P+++TENG+ GE +P E ++D R Y Y +AL+ AV
Sbjct: 351 WLLNYLWKAY-DKPVYVTENGFPVKGENDLP---VEQAVDDTDRQAYYRDYTEALLQAVT 406
Query: 354 RDGADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAKH 409
DGADVRGYF WSLLD+FEW GY RFG+ HVD+ T KRTPK SA + + +H
Sbjct: 407 EDGADVRGYFGWSLLDNFEWAEGYKVRFGVTHVDYETQKRTPKKSAEFLSRWFKEH 462
>pdb|1E1E|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1E|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1F|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
pdb|1E1F|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
Length = 512
Score = 305 bits (782), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 163/420 (38%), Positives = 247/420 (58%), Gaps = 13/420 (3%)
Query: 1 MESLGVNSYRFSISWARILPKG-RFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSP 59
++ +G+++YRFSISW RILPKG + G +N +GI +Y LI+ LL GI+P+VT+ +D P
Sbjct: 87 LKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHWDVP 146
Query: 60 QEIEDKYGAWLSPESQ---EDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHP 116
Q +E+KYG +L + ED+ YFA +CF +FGD+VK W T NEP + SY G
Sbjct: 147 QALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNEPQTFTSFSYGTGVFA 206
Query: 117 PAHCSQPFGNCS--QGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLW 174
P CS P +C+ GNS EP+ A HN++L+HA AVD+Y Y++D IG+ + +
Sbjct: 207 PGRCS-PGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKRDDT-RIGLAFDVMG 264
Query: 175 FEPISSSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQG 234
P +S DK A ER+ + WFL+P++ G YP M ++ LP F KEKL
Sbjct: 265 RVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARERLPFFKDEQKEKLAGS 324
Query: 235 LDFIGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQN-SQKHGVPLGEPTTLFWLNVYP 293
+ +G+N+YTS + ++ S P + + + Q + G P+G P W+ +YP
Sbjct: 325 YNMLGLNYYTSRFSKNIDISPNY-SPVLNTDDAYASQEVNGPDGKPIGPPMGNPWIYMYP 383
Query: 294 QGMWKIIKYIKERYKNTPMFITENGYGEICMPNS--STEDLLNDVKRVEYMASYLDALIT 351
+G+ ++ +K +Y N P++ITENG G++ + E LND KR++Y+ ++ L
Sbjct: 384 EGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYKRLDYIQRHIATLKE 443
Query: 352 AVRDGADVRGYFVWSLLDSFEWTYGYTARFGLHHVDF-ATLKRTPKLSATWYKHFIAKHK 410
++ G++V+GYF WSLLD+FEW G+T R+G+ +VD R K SA W K F K
Sbjct: 444 SIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEFNTAKK 503
>pdb|1HXJ|A Chain A, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
pdb|1HXJ|B Chain B, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
Length = 507
Score = 305 bits (782), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 163/420 (38%), Positives = 247/420 (58%), Gaps = 13/420 (3%)
Query: 1 MESLGVNSYRFSISWARILPKG-RFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSP 59
++ +G+++YRFSISW RILPKG + G +N +GI +Y LI+ LL GI+P+VT+ +D P
Sbjct: 82 LKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHWDVP 141
Query: 60 QEIEDKYGAWLSPESQ---EDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHP 116
Q +E+KYG +L + ED+ YFA +CF +FGD+VK W T NEP + SY G
Sbjct: 142 QALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNEPQTFTSFSYGTGVFA 201
Query: 117 PAHCSQPFGNCS--QGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLW 174
P CS P +C+ GNS EP+ A HN++L+HA AVD+Y Y++D IG+ + +
Sbjct: 202 PGRCS-PGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKRDDT-RIGLAFDVMG 259
Query: 175 FEPISSSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQG 234
P +S DK A ER+ + WFL+P++ G YP M ++ LP F KEKL
Sbjct: 260 RVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARERLPFFKDEQKEKLAGS 319
Query: 235 LDFIGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQN-SQKHGVPLGEPTTLFWLNVYP 293
+ +G+N+YTS + ++ S P + + + Q + G P+G P W+ +YP
Sbjct: 320 YNMLGLNYYTSRFSKNIDISPNY-SPVLNTDDAYASQEVNGPDGKPIGPPMGNPWIYMYP 378
Query: 294 QGMWKIIKYIKERYKNTPMFITENGYGEICMPNS--STEDLLNDVKRVEYMASYLDALIT 351
+G+ ++ +K +Y N P++ITENG G++ + E LND KR++Y+ ++ L
Sbjct: 379 EGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYKRLDYIQRHIATLKE 438
Query: 352 AVRDGADVRGYFVWSLLDSFEWTYGYTARFGLHHVDF-ATLKRTPKLSATWYKHFIAKHK 410
++ G++V+GYF WSLLD+FEW G+T R+G+ +VD R K SA W K F K
Sbjct: 439 SIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEFNTAKK 498
>pdb|1H49|A Chain A, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
pdb|1H49|B Chain B, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
Length = 512
Score = 304 bits (779), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 162/420 (38%), Positives = 248/420 (59%), Gaps = 13/420 (3%)
Query: 1 MESLGVNSYRFSISWARILPKG-RFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSP 59
++ +G+++YRFSISW RILPKG + G +N +GI +Y LI+ LL GI+P+VT+ +D P
Sbjct: 87 LKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHWDVP 146
Query: 60 QEIEDKYGAWLSPESQ---EDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHP 116
Q +E+KYG +L + ED+ YFA +CF +FGD+VK W T N+P ++SY G
Sbjct: 147 QALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNDPQTFTSVSYGTGVFA 206
Query: 117 PAHCSQPFGNCS--QGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLW 174
P CS P +C+ GNS EP+ A HN++L+HA AVD+Y Y++D IG+ + +
Sbjct: 207 PGRCS-PGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKRDDT-RIGLAFDVMG 264
Query: 175 FEPISSSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQG 234
P +S DK A ER+ + WFL+P++ G YP M ++ LP F KEKL
Sbjct: 265 RVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARERLPFFKDEQKEKLAGS 324
Query: 235 LDFIGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQN-SQKHGVPLGEPTTLFWLNVYP 293
+ +G+N+YTS + ++ S P + + + Q + G P+G P W+ +YP
Sbjct: 325 YNMLGLNYYTSRFSKNIDISPNY-SPVLNTDDAYASQEVNGPDGKPIGPPMGNPWIYMYP 383
Query: 294 QGMWKIIKYIKERYKNTPMFITENGYGEICMPNS--STEDLLNDVKRVEYMASYLDALIT 351
+G+ ++ +K +Y N P++ITENG G++ + E LND KR++Y+ ++ L
Sbjct: 384 EGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYKRLDYIQRHIATLKE 443
Query: 352 AVRDGADVRGYFVWSLLDSFEWTYGYTARFGLHHVDF-ATLKRTPKLSATWYKHFIAKHK 410
++ G++V+GYF WSLLD+FEW G+T R+G+ +VD R K SA W K F K
Sbjct: 444 SIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEFNTAKK 503
>pdb|1E4L|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4L|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4N|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E4N|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E55|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E55|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E56|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1E56|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1V08|A Chain A, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
pdb|1V08|B Chain B, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
Length = 512
Score = 304 bits (778), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 162/420 (38%), Positives = 247/420 (58%), Gaps = 13/420 (3%)
Query: 1 MESLGVNSYRFSISWARILPKG-RFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSP 59
++ +G+++YRFSISW RILPKG + G +N +GI +Y LI+ LL GI+P+VT+ +D P
Sbjct: 87 LKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHWDVP 146
Query: 60 QEIEDKYGAWLSPESQ---EDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHP 116
Q +E+KYG +L + ED+ YFA +CF +FGD+VK W T N+P + SY G
Sbjct: 147 QALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNDPQTFTSFSYGTGVFA 206
Query: 117 PAHCSQPFGNCS--QGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLW 174
P CS P +C+ GNS EP+ A HN++L+HA AVD+Y Y++D IG+ + +
Sbjct: 207 PGRCS-PGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYKRDDT-RIGLAFDVMG 264
Query: 175 FEPISSSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQG 234
P +S DK A ER+ + WFL+P++ G YP M ++ LP F KEKL
Sbjct: 265 RVPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARERLPFFKDEQKEKLAGS 324
Query: 235 LDFIGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQN-SQKHGVPLGEPTTLFWLNVYP 293
+ +G+N+YTS + ++ S P + + + Q + G P+G P W+ +YP
Sbjct: 325 YNMLGLNYYTSRFSKNIDISPNY-SPVLNTDDAYASQEVNGPDGKPIGPPMGNPWIYMYP 383
Query: 294 QGMWKIIKYIKERYKNTPMFITENGYGEICMPNS--STEDLLNDVKRVEYMASYLDALIT 351
+G+ ++ +K +Y N P++ITENG G++ + E LND KR++Y+ ++ L
Sbjct: 384 EGLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYKRLDYIQRHIATLKE 443
Query: 352 AVRDGADVRGYFVWSLLDSFEWTYGYTARFGLHHVDF-ATLKRTPKLSATWYKHFIAKHK 410
++ G++V+GYF WSLLD+FEW G+T R+G+ +VD R K SA W K F K
Sbjct: 444 SIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEFNTAKK 503
>pdb|4GXP|A Chain A, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|B Chain B, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|C Chain C, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
Length = 467
Score = 278 bits (712), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 158/414 (38%), Positives = 230/414 (55%), Gaps = 26/414 (6%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
+E LGV +YRFSISW RILP+G G VN +G++ YN++ID LL KGI PFVT+ +D P
Sbjct: 75 IEKLGVKAYRFSISWPRILPEGT-GRVNQKGLDFYNRIIDTLLEKGITPFVTIFHWDLPF 133
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
++ K G L+ E + F ++ + F++FGDRVK W T NEP Y G P
Sbjct: 134 ALQLK-GGLLNREIADWFAEYSRVLFENFGDRVKNWITFNEPLCSAIPGYGSGTFAPGR- 191
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
S EP+ HN++++H AV ++R + G IGI+LN + P +
Sbjct: 192 ----------QSTSEPWTVGHNILVAHGRAVKVFRETVKD---GKIGIVLNGDFTYPWDA 238
Query: 181 ST-ADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFIG 239
+ ADK AAER F+ WF DPI G YPA M +G LP F+ ++ + DF G
Sbjct: 239 ADPADKEAAERRLEFFTAWFADPIYLGDYPASMRKQLGDRLPTFTPEERALVHGSNDFYG 298
Query: 240 INHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKI 299
+NHYTS Y++ P + + K G +G T + WL G
Sbjct: 299 MNHYTSNYIR----HRSSPASADDTVGNVDVLFTNKQGNCIGPETAMPWLRPCAAGFRDF 354
Query: 300 IKYIKERYKNTPMFITENGYGEICMPNSSTED-LLNDVKRVEYMASYLDALITAVR-DGA 357
+ +I +RY P+++TENG + +ED ++D R++Y+ +Y+ A++TAV DG
Sbjct: 355 LVWISKRYGYPPIYVTENG---AAFDDVVSEDGRVHDQNRIDYLKAYIGAMVTAVELDGV 411
Query: 358 DVRGYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAKHKL 411
+V+GYFVWSLLD+FEW GY+ RFG+ +VD++T KR K S WY + + + L
Sbjct: 412 NVKGYFVWSLLDNFEWAEGYSKRFGIVYVDYSTQKRIVKDSGYWYSNVVKNNGL 465
>pdb|1MYR|A Chain A, Myrosinase From Sinapis Alba
Length = 501
Score = 278 bits (710), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 157/422 (37%), Positives = 242/422 (57%), Gaps = 22/422 (5%)
Query: 1 MESLGVNSYRFSISWARILPKG-RFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSP 59
++ L YRFSI+W+RI+P+G R VN +GI++Y+ LID L+ KGI PFVTL +D P
Sbjct: 86 LDELNATGYRFSIAWSRIIPRGKRSRGVNQKGIDYYHGLIDGLIKKGITPFVTLFHWDLP 145
Query: 60 QEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAH 119
Q ++D+Y +L P+ +DF +AD+CF+ FGD VKYW TIN+ T Y P
Sbjct: 146 QTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGR 205
Query: 120 CSQPFG-NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPI 178
CS +C GNS EP+I AH+ +L+HA VD+YR Y QGG IG + T WF P
Sbjct: 206 CSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNYTH-QGGKIGPTMITRWFLPY 264
Query: 179 SSSTADKLAA-ERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDF 237
+ + +AA ER + F++ WF+ P+ G YP M++ VG+ LP FS + +K DF
Sbjct: 265 NDTDRHSIAATERMKQFFLGWFMGPLTNGTYPQIMIDTVGARLPTFSPEETNLVKGSYDF 324
Query: 238 IGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQ--NSQKHGV-PLGE------PTTLFW 288
+G+N+Y + Y Q A G L N+ H + PL E + +++
Sbjct: 325 LGLNYYFTQYAQPSPNPVNATNHTAMMDAGAKLTYINASGHYIGPLFESDGGDGSSNIYY 384
Query: 289 LNVYPQGMWKIIKYIKERYKNTPMFITENGYGEICMPNSST-EDLLNDVKRVEYMASYLD 347
YP+G++ ++ Y K +Y N +++TENG I P S ++ + D R++Y+ S+L
Sbjct: 385 ---YPKGIYSVMDYFKNKYYNPLIYVTENG---ISTPGSENRKESMLDYTRIDYLCSHLC 438
Query: 348 ALITAVRD-GADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFATL-KRTPKLSATWYKHF 405
L +++ +V+GY W+L D++E+ G+T RFGL ++++ + R K S WY+ F
Sbjct: 439 FLNKVIKEKDVNVKGYLAWALGDNYEFNNGFTVRFGLSYINWNNVTDRDLKKSGQWYQKF 498
Query: 406 IA 407
I+
Sbjct: 499 IS 500
>pdb|1E6Q|M Chain M, Myrosinase From Sinapis Alba With The Bound Transition
State Analogue Gluco-Tetrazole
pdb|1E6X|M Chain M, Myrosinase From Sinapis Alba With A Bound Transition State
Analogue,D-Glucono-1,5-Lactone
pdb|1E70|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba
pdb|1E71|M Chain M, Myrosinase From Sinapis Alba With Bound Ascorbate
pdb|1E72|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate Or Ascorbate
pdb|1E73|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba With Bound
L-Ascorbate
pdb|1E6S|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate
pdb|1E4M|M Chain M, Myrosinase From Sinapis Alba
pdb|1W9B|M Chain M, S. Alba Myrosinase In Complex With Carba-Glucotropaeolin
pdb|1W9D|M Chain M, S. Alba Myrosinase In Complex With S-Ethyl
Phenylacetothiohydroximate-O-Sulfate
pdb|2WXD|M Chain M, A Micromolar O-Sulfated Thiohydroximate Inhibitor Bound To
Plant Myrosinase
Length = 501
Score = 275 bits (704), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 156/419 (37%), Positives = 236/419 (56%), Gaps = 16/419 (3%)
Query: 1 MESLGVNSYRFSISWARILPKG-RFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSP 59
++ L YRFSI+W+RI+P+G R VN +GI++Y+ LI L+ KGI PFVTL +D P
Sbjct: 86 LDELNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLP 145
Query: 60 QEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAH 119
Q ++D+Y +L P+ +DF +AD+CF+ FGD VKYW TIN+ T Y P
Sbjct: 146 QTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGR 205
Query: 120 CSQPFG-NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPI 178
CS +C GNS EP+I AH+ +L+HA VD+YR Y QGG IG + T WF P
Sbjct: 206 CSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNYTH-QGGKIGPTMITRWFLPY 264
Query: 179 SSSTADKLAA-ERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDF 237
+ + +AA ER + F++ WF+ P+ G YP M++ VG LP FS + +K DF
Sbjct: 265 NDTDRHSIAATERMKEFFLGWFMGPLTNGTYPQIMIDTVGERLPSFSPEESNLVKGSYDF 324
Query: 238 IGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQ--NSQKHGV-PLGE---PTTLFWLNV 291
+G+N+Y + Y Q A G L N+ H + PL E + +
Sbjct: 325 LGLNYYFTQYAQPSPNPVNSTNHTAMMDAGAKLTYINASGHYIGPLFEKDKADSTDNIYY 384
Query: 292 YPQGMWKIIKYIKERYKNTPMFITENGYGEICMPNSSTEDL-LNDVKRVEYMASYLDALI 350
YP+G++ ++ Y K +Y N +++TENG I P + + D R++Y+ S+L L
Sbjct: 385 YPKGIYSVMDYFKNKYYNPLIYVTENG---ISTPGDENRNQSMLDYTRIDYLCSHLCFLN 441
Query: 351 TAVRD-GADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFATL-KRTPKLSATWYKHFIA 407
+++ +V+GY W+L D++E+ G+T RFGL ++D+ + R K S WY+ FI+
Sbjct: 442 KVIKEKDVNVKGYLAWALGDNYEFNKGFTVRFGLSYIDWNNVTDRDLKKSGQWYQSFIS 500
>pdb|1DWA|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 1:
Structure Prior To Irradiation
pdb|1DWF|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 2:
Structure After Irradiation With 9.110e15 PhotonsMM2
pdb|1DWG|M Chain M, Study On Radiation Damage On A Cryocooled Crystal: Part 3
Structure After Irradiation With 18.210e15 PhotonsMM2.
pdb|1DWH|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 4:
Structure After Irradiation With 27.210e15 PhotonsMM2
pdb|1DWI|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 5:
Structure After Irradiation With 54.010e15 PhotonsMM2
pdb|1DWJ|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Refined
Part 6: Structure After A Radiation Dose Of 5410e15
PhotonsMM2
Length = 499
Score = 275 bits (703), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 156/419 (37%), Positives = 236/419 (56%), Gaps = 16/419 (3%)
Query: 1 MESLGVNSYRFSISWARILPKG-RFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSP 59
++ L YRFSI+W+RI+P+G R VN +GI++Y+ LI L+ KGI PFVTL +D P
Sbjct: 84 LDELNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLP 143
Query: 60 QEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAH 119
Q ++D+Y +L P+ +DF +AD+CF+ FGD VKYW TIN+ T Y P
Sbjct: 144 QTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGR 203
Query: 120 CSQPFG-NCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPI 178
CS +C GNS EP+I AH+ +L+HA VD+YR Y QGG IG + T WF P
Sbjct: 204 CSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNYTH-QGGKIGPTMITRWFLPY 262
Query: 179 SSSTADKLAA-ERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDF 237
+ + +AA ER + F++ WF+ P+ G YP M++ VG LP FS + +K DF
Sbjct: 263 NDTDRHSIAATERMKEFFLGWFMGPLTNGTYPQIMIDTVGERLPSFSPEESNLVKGSYDF 322
Query: 238 IGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQ--NSQKHGV-PLGE---PTTLFWLNV 291
+G+N+Y + Y Q A G L N+ H + PL E + +
Sbjct: 323 LGLNYYFTQYAQPSPNPVNSTNHTAMMDAGAKLTYINASGHYIGPLFEKDKADSTDNIYY 382
Query: 292 YPQGMWKIIKYIKERYKNTPMFITENGYGEICMPNSSTEDL-LNDVKRVEYMASYLDALI 350
YP+G++ ++ Y K +Y N +++TENG I P + + D R++Y+ S+L L
Sbjct: 383 YPKGIYSVMDYFKNKYYNPLIYVTENG---ISTPGDENRNQSMLDYTRIDYLCSHLCFLN 439
Query: 351 TAVRD-GADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFATL-KRTPKLSATWYKHFIA 407
+++ +V+GY W+L D++E+ G+T RFGL ++D+ + R K S WY+ FI+
Sbjct: 440 KVIKEKDVNVKGYLAWALGDNYEFNKGFTVRFGLSYIDWNNVTDRDLKKSGQWYQTFIS 498
>pdb|1QOX|A Chain A, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|B Chain B, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|C Chain C, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|D Chain D, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|E Chain E, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|F Chain F, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|G Chain G, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|H Chain H, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|I Chain I, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|J Chain J, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|K Chain K, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|L Chain L, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|M Chain M, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|N Chain N, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|O Chain O, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|P Chain P, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
Length = 449
Score = 261 bits (667), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 149/412 (36%), Positives = 227/412 (55%), Gaps = 38/412 (9%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
++ LGV YRFSISW R+LP+G G+VN G+++Y++L+D LL GI+PF TL +D PQ
Sbjct: 67 LKDLGVKVYRFSISWPRVLPQGT-GEVNRAGLDYYHRLVDELLANGIEPFCTLYHWDLPQ 125
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
++D+ G W S + + F +A++ FK G ++K W T NEP LS LG H P
Sbjct: 126 ALQDQ-GGWGSRITIDAFAEYAELMFKELGGKIKQWITFNEPWCMAFLSNYLGVHAP--- 181
Query: 121 SQPFGNCSQGNSEEEPFI-AAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPIS 179
GN + + I +H+L+++H AV ++R + G IGI NT W P
Sbjct: 182 ---------GNKDLQLAIDVSHHLLVAHGRAVTLFR---ELGISGEIGIAPNTSWAVPYR 229
Query: 180 SSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGST--LPKFSSRDKEKLKQGLDF 237
+ D A R + +W+LDPI +G+YP M++ + P D E + Q +DF
Sbjct: 230 RTKEDMEACLRVNGWSGDWYLDPIYFGEYPKFMLDWYENLGYKPPIVDGDMELIHQPIDF 289
Query: 238 IGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMW 297
IGIN+YTS+ + PG + +G P T +Y +G++
Sbjct: 290 IGINYYTSS------MNRYNPGEAGGML--------SSEAISMGAPKTDIGWEIYAEGLY 335
Query: 298 KIIKYIKERYKNTPMFITENGYGEICMPNS-STEDLLNDVKRVEYMASYLDALITAVRDG 356
+++Y ++Y N ++ITENG C + S + ++D +R++Y+A +L A+ DG
Sbjct: 336 DLLRYTADKYGNPTLYITENG---ACYNDGLSLDGRIHDQRRIDYLAMHLIQASRAIEDG 392
Query: 357 ADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAK 408
+++GY WSL+D+FEW GY RFGL HVD+ TL RTPK S WYK I++
Sbjct: 393 INLKGYMEWSLMDNFEWAEGYGMRFGLVHVDYDTLVRTPKDSFYWYKGVISR 444
>pdb|2JFE|X Chain X, The Crystal Structure Of Human Cytosolic Beta-Glucosidase
Length = 469
Score = 259 bits (663), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 233/426 (54%), Gaps = 41/426 (9%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
++ LG+ YRFS+SW+R+LP G G +N +GI++YNK+ID LL G+ P VTL FD PQ
Sbjct: 66 IKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQ 125
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
+ED+ G WLS E F +A CF +FGDRVK W TINE N+ +SY LG PP
Sbjct: 126 TLEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINEANVLSVMSYDLGMFPPGIP 184
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPIS- 179
FG + AAHNLI +HA + Y + ++K Q G + + L +W EP
Sbjct: 185 H--FGTGG--------YQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPADP 234
Query: 180 SSTADKLAAERAQSFYMNWFLDPI-IYGKYPAEMMNIVGST----------LPKFSSRDK 228
+S +D+ AA+RA +F+++ F PI I G YP + + + S LP+F+ +K
Sbjct: 235 NSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEK 294
Query: 229 EKLKQGLDFIGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFW 288
+ +K DF + +YT+ ++ + K G E LQ+++ P + W
Sbjct: 295 KMIKGTADFFAVQYYTTRLIK---YQENKKG------ELGILQDAEIEFFPDPSWINVDW 345
Query: 289 LNVYPQGMWKIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDA 348
+ V P G+ K++KYIK+ Y N ++ITENG+ + S L+D +R EY
Sbjct: 346 IYVVPWGVCKLLKYIKDTYNNPVIYITENGFPQ------SDPAPLDDTQRWEYFRQTFQE 399
Query: 349 LITAVR-DGADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFA--TLKRTPKLSATWYKHF 405
L A++ D +++ Y WSLLD+FEW GY++RFGL HVDF R P SA Y
Sbjct: 400 LFKAIQLDKVNLQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSAKEYAKI 459
Query: 406 IAKHKL 411
I + L
Sbjct: 460 IRNNGL 465
>pdb|2E9L|A Chain A, Crystal Structure Of Human Cytosolic Neutral
Beta-Glycosylceramidase (Klotho-Related Prote:klrp)
Complex With Glucose And Fatty Acids
pdb|2E9M|A Chain A, Crystal Structure Of Human Cytosolic Neutral Beta-
Glycosylceramidase (Klotho-Related Prote:klrp) Complex
With Galactose And Fatty Acids
Length = 469
Score = 259 bits (663), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 233/426 (54%), Gaps = 41/426 (9%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
++ LG+ YRFS+SW+R+LP G G +N +GI++YNK+ID LL G+ P VTL FD PQ
Sbjct: 66 IKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQ 125
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
+ED+ G WLS E F +A CF +FGDRVK W TINE N+ +SY LG PP
Sbjct: 126 TLEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINEANVLSVMSYDLGMFPPGIP 184
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPIS- 179
FG + AAHNLI +HA + Y + ++K Q G + + L +W EP
Sbjct: 185 H--FGTGG--------YQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPADP 234
Query: 180 SSTADKLAAERAQSFYMNWFLDPI-IYGKYPAEMMNIVGST----------LPKFSSRDK 228
+S +D+ AA+RA +F+++ F PI I G YP + + + S LP+F+ +K
Sbjct: 235 NSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEK 294
Query: 229 EKLKQGLDFIGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFW 288
+ +K DF + +YT+ ++ + K G E LQ+++ P + W
Sbjct: 295 KMIKGTADFFAVQYYTTRLIK---YQENKKG------ELGILQDAEIEFFPDPSWKNVDW 345
Query: 289 LNVYPQGMWKIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDA 348
+ V P G+ K++KYIK+ Y N ++ITENG+ + S L+D +R EY
Sbjct: 346 IYVVPWGVCKLLKYIKDTYNNPVIYITENGFPQ------SDPAPLDDTQRWEYFRQTFQE 399
Query: 349 LITAVR-DGADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFA--TLKRTPKLSATWYKHF 405
L A++ D +++ Y WSLLD+FEW GY++RFGL HVDF R P SA Y
Sbjct: 400 LFKAIQLDKVNLQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSAKEYAKI 459
Query: 406 IAKHKL 411
I + L
Sbjct: 460 IRNNGL 465
>pdb|3AHY|A Chain A, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|B Chain B, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|C Chain C, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|D Chain D, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
Length = 473
Score = 259 bits (663), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 157/408 (38%), Positives = 218/408 (53%), Gaps = 28/408 (6%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGD-VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSP 59
++SLG SYRFSISW+RI+P+G GD VN GI+HY K +D LL GI PF+TL +D P
Sbjct: 71 LKSLGAKSYRFSISWSRIIPEGGRGDAVNQAGIDHYVKFVDDLLDAGITPFITLFHWDLP 130
Query: 60 QEIEDKYGAWLS-PESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPA 118
+ + +YG L+ E DF +A + F++ +V+ W T NEP Y G P
Sbjct: 131 EGLHQRYGGLLNRTEFPLDFENYARVMFRAL-PKVRNWITFNEPLCSAIPGYGSGTFAPG 189
Query: 119 HCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQG-GSIGIILNTLWFEP 177
S EP+ HN++++H AV YR ++ G G IGI+LN + P
Sbjct: 190 R-----------QSTSEPWTVGHNILVAHGRAVKAYRDDFKPASGDGQIGIVLNGDFTYP 238
Query: 178 ISSST-ADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLD 236
++ ADK AAER F+ WF DPI G YPA M +G LP F+ ++ + D
Sbjct: 239 WDAADPADKEAAERRLEFFTAWFADPIYLGDYPASMRKQLGDRLPTFTPEERALVHGSND 298
Query: 237 FIGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGM 296
F G+NHYTS Y++ P + + K G +G T WL G
Sbjct: 299 FYGMNHYTSNYIR----HRSSPASADDTVGNVDVLFTNKQGNCIGPETQSPWLRPCAAGF 354
Query: 297 WKIIKYIKERYKNTPMFITENGY---GEICMPNSSTEDLLNDVKRVEYMASYLDALITAV 353
+ +I +RY P+++TENG GE +P E +L D RV+Y Y+ A++TAV
Sbjct: 355 RDFLVWISKRYGYPPIYVTENGTSIKGESDLPK---EKILEDDFRVKYYNEYIRAMVTAV 411
Query: 354 R-DGADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFAT-LKRTPKLSA 399
DG +V+GYF WSL+D+FEW GY RFG+ +VD+ KR PK SA
Sbjct: 412 ELDGVNVKGYFAWSLMDNFEWADGYVTRFGVTYVDYENGQKRFPKKSA 459
>pdb|3AHX|A Chain A, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|B Chain B, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|C Chain C, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|D Chain D, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
Length = 453
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 147/410 (35%), Positives = 221/410 (53%), Gaps = 37/410 (9%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
++SLG+ SYRFSI+W RI PKG FG++N +GI Y LID L+ I+P +T+ +D PQ
Sbjct: 68 LKSLGIKSYRFSIAWPRIFPKG-FGEINQKGIQFYRDLIDELIKNDIEPAITIYHWDLPQ 126
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
+++D G W +P+ + + +A++ F+ FGDRVK W T NEP + L Y LG H P
Sbjct: 127 KLQD-IGGWANPQVADYYVDYANLLFREFGDRVKTWITHNEPWVASYLGYALGVHAPGIK 185
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
+AAHN++LSH AV YR + +Q G IGI LN S+
Sbjct: 186 DMKMA-----------LLAAHNILLSHFKAVKAYR---ELEQDGQIGITLNLSTCYSNSA 231
Query: 181 STADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGST--LPKFSSRDKEKLKQGLDFI 238
D AA R+ + WFLD + G YP +M+ I T +P+ ++ + DF+
Sbjct: 232 DEEDIAAAHRSDGWNNRWFLDAALKGTYPEDMIKIFSDTNIMPELPKELFTEVFETSDFL 291
Query: 239 GINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWK 298
GIN+YT V++ +E F S V + P T +YPQG++
Sbjct: 292 GINYYTRQVVKN-------------NSEAFIGAES----VAMDNPKTEMGWEIYPQGLYD 334
Query: 299 IIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGAD 358
++ I Y N ++ITENG M N + + D R++Y+ ++ A ++A+ G
Sbjct: 335 LLTRIHRDYGNIDLYITENGAAFNDMVNRDGK--VEDENRLDYLYTHFAAALSAIEAGVP 392
Query: 359 VRGYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAK 408
++GY++WS +D+FEW GY RFG+ HV++ T +RT K SA WYK I +
Sbjct: 393 LKGYYIWSFMDNFEWAEGYEKRFGIVHVNYKTQERTIKKSAYWYKELIER 442
>pdb|2ZOX|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase
pdb|3VKK|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase-Mannose Complex
Length = 469
Score = 258 bits (660), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 159/426 (37%), Positives = 233/426 (54%), Gaps = 41/426 (9%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
++ LG+ YRFS+SW+R+LP G G +N +GI++YNK+ID LL G+ P VTL FD PQ
Sbjct: 66 IKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQ 125
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
+ED+ G WLS E F +A CF +FGDRVK W TIN+ N+ +SY LG PP
Sbjct: 126 TLEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINQANVLSVMSYDLGMFPPGIP 184
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPIS- 179
FG + AAHNLI +HA + Y + ++K Q G + + L +W EP
Sbjct: 185 H--FGTGG--------YQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPADP 234
Query: 180 SSTADKLAAERAQSFYMNWFLDPI-IYGKYPAEMMNIVGST----------LPKFSSRDK 228
+S +D+ AA+RA +F+++ F PI I G YP + + + S LP+F+ +K
Sbjct: 235 NSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTEEEK 294
Query: 229 EKLKQGLDFIGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFW 288
+ +K DF + +YT+ ++ + K G E LQ+++ P + W
Sbjct: 295 KMIKGTADFFAVQYYTTRLIK---YQENKKG------ELGILQDAEIEFFPDPSWKNVDW 345
Query: 289 LNVYPQGMWKIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDA 348
+ V P G+ K++KYIK+ Y N ++ITENG+ + S L+D +R EY
Sbjct: 346 IYVVPWGVCKLLKYIKDTYNNPVIYITENGFPQ------SDPAPLDDTQRWEYFRQTFQE 399
Query: 349 LITAVR-DGADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFA--TLKRTPKLSATWYKHF 405
L A++ D +++ Y WSLLD+FEW GY++RFGL HVDF R P SA Y
Sbjct: 400 LFKAIQLDKVNLQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSAKEYAKI 459
Query: 406 IAKHKL 411
I + L
Sbjct: 460 IRNNGL 465
>pdb|3TA9|A Chain A, Beta-Glucosidase A From The Halothermophile H. Orenii
pdb|3TA9|B Chain B, Beta-Glucosidase A From The Halothermophile H. Orenii
Length = 458
Score = 250 bits (639), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 146/415 (35%), Positives = 225/415 (54%), Gaps = 38/415 (9%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
M+ +G+ SYRFS SW RILP+G+ G VN +G++ Y +L+D LL I+P +TL +D PQ
Sbjct: 75 MKEIGIRSYRFSTSWPRILPEGK-GRVNQKGLDFYKRLVDNLLKANIRPMITLYHWDLPQ 133
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
++DK G W + ++ + F +A + F+ F V W T NEP + + G H P
Sbjct: 134 ALQDK-GGWTNRDTAKYFAEYARLMFEEFNGLVDLWVTHNEPWVVAFEGHAFGNHAPG-- 190
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
++ F Q AH+L+LSH AVDI+R ++D G IGI LN P
Sbjct: 191 TKDFKTALQ---------VAHHLLLSHGMAVDIFR---EEDLPGEIGITLNLTPAYPAGD 238
Query: 181 STADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSR--DKEKLKQGLDFI 238
S D AA + WFL P+ G YP E+ +I L F+++ D + + + +DF+
Sbjct: 239 SEKDVKAASLLDDYINAWFLSPVFKGSYPEELHHIYEQNLGAFTTQPGDMDIISRDIDFL 298
Query: 239 GINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWK 298
GIN+Y+ V+ KPG E +++ P+T +YPQG++
Sbjct: 299 GINYYSRMVVR------HKPGDNLFNAEVVKMED---------RPSTEMGWEIYPQGLYD 343
Query: 299 IIKYIKERYKNTPMFITENGYGEICMPNSSTED-LLNDVKRVEYMASYLDALITAVRDGA 357
I+ + + Y + P++ITENG + TE+ ++D KR+ Y+ + A++DG
Sbjct: 344 ILVRVNKEYTDKPLYITENG---AAFDDKLTEEGKIHDEKRINYLGDHFKQAYKALKDGV 400
Query: 358 DVRGYFVWSLLDSFEWTYGYTARFGLHHVDFAT-LKRTPKLSATWYKHFIAKHKL 411
+RGY+VWSL+D+FEW YGY+ RFGL +VD+ +R K SA WY+ I K ++
Sbjct: 401 PLRGYYVWSLMDNFEWAYGYSKRFGLIYVDYENGNRRFLKDSALWYREVIEKGQV 455
>pdb|1OD0|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OD0|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIF|A Chain A, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIF|B Chain B, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIM|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIM|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1W3J|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1W3J|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1UZ1|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|1UZ1|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|2CBU|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBU|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBV|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CBV|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CES|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CES|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CET|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2CET|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2J77|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J77|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J78|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J78|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J79|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J79|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J7B|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7B|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7C|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7C|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7D|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7D|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7E|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7E|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7F|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7F|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7G|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7G|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7H|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J7H|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J75|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2J75|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2JAL|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2JAL|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2VRJ|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2VRJ|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2WBG|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WC3|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC4|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
Length = 468
Score = 247 bits (631), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 147/414 (35%), Positives = 229/414 (55%), Gaps = 40/414 (9%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
+E LGV +YRFSISW RILP+G G VN +G++ YN++ID LL KGI PFVT+ +D P
Sbjct: 90 IEKLGVKAYRFSISWPRILPEGT-GRVNQKGLDFYNRIIDTLLEKGITPFVTIYHWDLPF 148
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
++ K G W + E + F ++ + F++FGDRVK W T+NEP + + + G H P
Sbjct: 149 ALQLK-GGWANREIADWFAEYSRVLFENFGDRVKNWITLNEPWVVAIVGHLYGVHAPGMR 207
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
F A HNL+ +HA AV ++R + + G IGI+ N +FEP S
Sbjct: 208 DIYVA-----------FRAVHNLLRAHARAVKVFR---ETVKDGKIGIVFNNGYFEPASE 253
Query: 181 STADKLAAERAQSFYMNW--FLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFI 238
D + A R + N+ FL+PI G YP ++ LP+ D ++++ +DF+
Sbjct: 254 KEED-IRAVRFMHQFNNYPLFLNPIYRGDYPELVLEFAREYLPENYKDDMSEIQEKIDFV 312
Query: 239 GINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWK 298
G+N+Y+ V K P A F ++ K T + W + P+G++
Sbjct: 313 GLNYYSGHLV--------KFDPDAPAKVSFVERDLPK--------TAMGW-EIVPEGIYW 355
Query: 299 IIKYIKERYKNTPMFITENGYGEICMPNSSTED-LLNDVKRVEYMASYLDALITAVRDGA 357
I+K +KE Y ++ITENG + +ED ++D R++Y+ +++ A+++G
Sbjct: 356 ILKKVKEEYNPPEVYITENG---AAFDDVVSEDGRVHDQNRIDYLKAHIGQAWKAIQEGV 412
Query: 358 DVRGYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAKHKL 411
++GYFVWSLLD+FEW GY+ RFG+ +VD++T KR K S WY + + + L
Sbjct: 413 PLKGYFVWSLLDNFEWAEGYSKRFGIVYVDYSTQKRIVKDSGYWYSNVVKNNGL 466
>pdb|2O9P|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa
pdb|2O9T|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
Glucose
pdb|2Z1S|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa Complexed
With Cellotetraose
Length = 454
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 142/413 (34%), Positives = 215/413 (52%), Gaps = 40/413 (9%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
M+ LG YRFS++W RI+P G +N EG+ Y L+D + L G+ P +TL +D PQ
Sbjct: 76 MKQLGFLHYRFSVAWPRIMPAA--GIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLPQ 133
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
IED+ G W E+ + F +A + FG+R+ +W TINEP L Y G H P H
Sbjct: 134 WIEDE-GGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGEHAPGH- 191
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
+ E F AAH++++ H A ++++ +K G IGI LN + S
Sbjct: 192 ----------ENWREAFTAAHHILMCHGIASNLHK---EKGLTGKIGITLNMEHVDAASE 238
Query: 181 STADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFS---SRDKEKLKQGLDF 237
D AA R F WF +P+ GKYP +M+ G+ L D E ++Q DF
Sbjct: 239 RPEDVAAAIRRDGFINRWFAEPLFNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQPGDF 298
Query: 238 IGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMW 297
+GIN+YT + ++ S + LQ Q H + EP T ++P+ +
Sbjct: 299 LGINYYTRSIIR-------------STNDASLLQVEQVH---MEEPVTDMGWEIHPESFY 342
Query: 298 KIIKYIKERY-KNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDG 356
K++ I++ + K P+ ITENG M + + D R Y+ +L A + +G
Sbjct: 343 KLLTRIEKDFSKGLPILITENG---AAMRDELVNGQIEDTGRQRYIEEHLKACHRFIEEG 399
Query: 357 ADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAKH 409
++GYFVWS LD+FEW +GY+ RFG+ H+++ T +RTPK SA W+K +AK+
Sbjct: 400 GQLKGYFVWSFLDNFEWAWGYSKRFGIVHINYETQERTPKQSALWFKQMMAKN 452
>pdb|2O9R|A Chain A, Beta-Glucosidase B Complexed With Thiocellobiose
Length = 452
Score = 246 bits (627), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 142/413 (34%), Positives = 215/413 (52%), Gaps = 40/413 (9%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
M+ LG YRFS++W RI+P G +N EG+ Y L+D + L G+ P +TL +D PQ
Sbjct: 74 MKQLGFLHYRFSVAWPRIMPAA--GIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLPQ 131
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
IED+ G W E+ + F +A + FG+R+ +W TINEP L Y G H P H
Sbjct: 132 WIEDE-GGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGEHAPGH- 189
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
+ E F AAH++++ H A ++++ +K G IGI LN + S
Sbjct: 190 ----------ENWREAFTAAHHILMCHGIASNLHK---EKGLTGKIGITLNMEHVDAASE 236
Query: 181 STADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFS---SRDKEKLKQGLDF 237
D AA R F WF +P+ GKYP +M+ G+ L D E ++Q DF
Sbjct: 237 RPEDVAAAIRRDGFINRWFAEPLFNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQPGDF 296
Query: 238 IGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMW 297
+GIN+YT + ++ S + LQ Q H + EP T ++P+ +
Sbjct: 297 LGINYYTRSIIR-------------STNDASLLQVEQVH---MEEPVTDMGWEIHPESFY 340
Query: 298 KIIKYIKERY-KNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDG 356
K++ I++ + K P+ ITENG M + + D R Y+ +L A + +G
Sbjct: 341 KLLTRIEKDFSKGLPILITENG---AAMRDELVNGQIEDTGRQRYIEEHLKACHRFIEEG 397
Query: 357 ADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAKH 409
++GYFVWS LD+FEW +GY+ RFG+ H+++ T +RTPK SA W+K +AK+
Sbjct: 398 GQLKGYFVWSFLDNFEWAWGYSKRFGIVHINYETQERTPKQSALWFKQMMAKN 450
>pdb|2JIE|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
2- F-Glucose
Length = 454
Score = 244 bits (623), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 142/413 (34%), Positives = 215/413 (52%), Gaps = 40/413 (9%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
M+ LG YRFS++W RI+P G +N EG+ Y L+D + L G+ P +TL +D PQ
Sbjct: 76 MKQLGFLHYRFSVAWPRIMPAA--GIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLPQ 133
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
IED+ G W E+ + F +A + FG+R+ +W TINEP L Y G H P H
Sbjct: 134 WIEDE-GGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGEHAPGH- 191
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
+ E F AAH++++ H A ++++ +K G IGI LN + S
Sbjct: 192 ----------ENWREAFTAAHHILMCHGIASNLHK---EKGLTGKIGITLNMEHVDAASE 238
Query: 181 STADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFS---SRDKEKLKQGLDF 237
D AA R F WF +P+ GKYP +M+ G+ L D E ++Q DF
Sbjct: 239 RPEDVAAAIRRDGFINRWFAEPLFNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQPGDF 298
Query: 238 IGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMW 297
+GIN+YT + ++ S + LQ Q H + EP T ++P+ +
Sbjct: 299 LGINYYTRSIIR-------------STNDASLLQVEQVH---MEEPVTDMGWEIHPESFY 342
Query: 298 KIIKYIKERY-KNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDG 356
K++ I++ + K P+ ITENG M + + D R Y+ +L A + +G
Sbjct: 343 KLLTRIEKDFSKGLPILITENG---AAMRDELVNGQIEDTGRHGYIEEHLKACHRFIEEG 399
Query: 357 ADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAKH 409
++GYFVWS LD+FEW +GY+ RFG+ H+++ T +RTPK SA W+K +AK+
Sbjct: 400 GQLKGYFVWSFLDNFEWAWGYSKRFGIVHINYETQERTPKQSALWFKQMMAKN 452
>pdb|1UYQ|A Chain A, Mutated B-Glucosidase A From Paenibacillus Polymyxa
Showing Increased Stability
Length = 447
Score = 242 bits (617), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 143/414 (34%), Positives = 220/414 (53%), Gaps = 40/414 (9%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
M+ LG+ +YRFS+SW RI P G G+VN EG+++Y++++D L GI+PF TL +D PQ
Sbjct: 67 MKELGIRTYRFSVSWPRIFPNGD-GEVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQ 125
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
++D G W + + + F FA+ F+ F ++++W T NEP LS LG H P
Sbjct: 126 ALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPGLT 184
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
+ + H+L+++H +V +R + G IGI N W P S+
Sbjct: 185 NL-----------QTAIDVGHHLLVAHGLSVRRFR---ELGTSGQIGIAPNVSWAVPYST 230
Query: 181 STADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIV---GSTLPKFSSRDKEKLKQGLDF 237
S DK A R S + +WFL PI G YP +++ G+T+P D + + + +D
Sbjct: 231 SEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVP-IQDGDMDIIGEPIDM 289
Query: 238 IGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMW 297
IGIN+Y+ S + P A GF Q + +G P T V +G++
Sbjct: 290 IGINYYS--------MSVNRFNPEA----GFL----QSEEINMGLPVTDIGWPVESRGLY 333
Query: 298 KIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGA 357
+++ Y+ ++Y N ++ITENG C+ + + D +R+ YM +L + A+ DG
Sbjct: 334 EVLHYL-QKYGNIDIYITENG---ACINDEVVNGKVQDDRRISYMQQHLVQVHRAIHDGL 389
Query: 358 DVRGYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAKHKL 411
V+GY WSLLD+FEW GY RFG+ HVDF T RTPK S WY++ + + L
Sbjct: 390 HVKGYMAWSLLDNFEWAEGYNMRFGMIHVDFRTQVRTPKQSYYWYRNVVGNNWL 443
>pdb|1BGA|A Chain A, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|B Chain B, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|C Chain C, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|D Chain D, Beta-Glucosidase A From Bacillus Polymyxa
Length = 447
Score = 240 bits (613), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 142/414 (34%), Positives = 220/414 (53%), Gaps = 40/414 (9%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
M+ LG+ +YRFS+SW RI P G G+VN EG+++Y++++D L GI+PF TL +D PQ
Sbjct: 67 MKELGIRTYRFSVSWPRIFPNGD-GEVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQ 125
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
++D G W + + + F FA+ F+ F ++++W T NEP LS LG H P
Sbjct: 126 ALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPGLT 184
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
+ + H+L+++H +V +R + G IGI N W P S+
Sbjct: 185 NL-----------QTAIDVGHHLLVAHGLSVRRFR---ELGTSGQIGIAPNVSWAVPYST 230
Query: 181 STADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIV---GSTLPKFSSRDKEKLKQGLDF 237
S DK A R S + +WFL PI G YP +++ G+T+P D + + + +D
Sbjct: 231 SEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVP-IQDGDMDIIGEPIDM 289
Query: 238 IGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMW 297
IGIN+Y+ S + P A GF Q + +G P T V +G++
Sbjct: 290 IGINYYS--------MSVNRFNPEA----GFL----QSEEINMGLPVTDIGWPVESRGLY 333
Query: 298 KIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGA 357
+++ Y+ ++Y N ++ITENG C+ + + D +R+ YM +L + + DG
Sbjct: 334 EVLHYL-QKYGNIDIYITENG---ACINDEVVNGKVQDDRRISYMQQHLVQVHRTIHDGL 389
Query: 358 DVRGYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAKHKL 411
V+GY WSLLD+FEW GY RFG+ HVDF T RTPK S WY++ ++ + L
Sbjct: 390 HVKGYMAWSLLDNFEWAEGYNMRFGMIHVDFRTQVRTPKESYYWYRNVVSNNWL 443
>pdb|1BGG|A Chain A, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|B Chain B, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|C Chain C, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|D Chain D, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
Length = 448
Score = 240 bits (613), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 142/414 (34%), Positives = 220/414 (53%), Gaps = 40/414 (9%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
M+ LG+ +YRFS+SW RI P G G+VN EG+++Y++++D L GI+PF TL +D PQ
Sbjct: 68 MKELGIRTYRFSVSWPRIFPNGD-GEVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQ 126
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
++D G W + + + F FA+ F+ F ++++W T NEP LS LG H P
Sbjct: 127 ALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPGLT 185
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
+ + H+L+++H +V +R + G IGI N W P S+
Sbjct: 186 NL-----------QTAIDVGHHLLVAHGLSVRRFR---ELGTSGQIGIAPNVSWAVPYST 231
Query: 181 STADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIV---GSTLPKFSSRDKEKLKQGLDF 237
S DK A R S + +WFL PI G YP +++ G+T+P D + + + +D
Sbjct: 232 SEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVP-IQDGDMDIIGEPIDM 290
Query: 238 IGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMW 297
IGIN+Y+ S + P A GF Q + +G P T V +G++
Sbjct: 291 IGINYYS--------MSVNRFNPEA----GFL----QSEEINMGLPVTDIGWPVESRGLY 334
Query: 298 KIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGA 357
+++ Y+ ++Y N ++ITENG C+ + + D +R+ YM +L + + DG
Sbjct: 335 EVLHYL-QKYGNIDIYITENG---ACINDEVVNGKVQDDRRISYMQQHLVQVHRTIHDGL 390
Query: 358 DVRGYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAKHKL 411
V+GY WSLLD+FEW GY RFG+ HVDF T RTPK S WY++ ++ + L
Sbjct: 391 HVKGYMAWSLLDNFEWAEGYNMRFGMIHVDFRTQVRTPKESYYWYRNVVSNNWL 444
>pdb|1E4I|A Chain A, 2-Deoxy-2-Fluoro-Beta-D-GlucosylENZYME INTERMEDIATE
Complex Of The Beta-Glucosidase From Bacillus Polymyxa
Length = 447
Score = 239 bits (610), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 220/414 (53%), Gaps = 40/414 (9%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
M+ LG+ +YRFS+SW RI P G G+VN +G+++Y++++D L GI+PF TL +D PQ
Sbjct: 67 MKELGIRTYRFSVSWPRIFPNGD-GEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQ 125
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
++D G W + + + F FA+ F+ F ++++W T NEP LS LG H P
Sbjct: 126 ALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPGLT 184
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
+ + H+L+++H +V +R + G IGI N W P S+
Sbjct: 185 NL-----------QTAIDVGHHLLVAHGLSVRRFR---ELGTSGQIGIAPNVSWAVPYST 230
Query: 181 STADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIV---GSTLPKFSSRDKEKLKQGLDF 237
S DK A R S + +WFL PI G YP +++ G+T+P D + + + +D
Sbjct: 231 SEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVP-IQDGDMDIIGEPIDM 289
Query: 238 IGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMW 297
IGIN+Y+ S + P A GF Q + +G P T V +G++
Sbjct: 290 IGINYYS--------MSVNRFNPEA----GFL----QSEEINMGLPVTDIGWPVESRGLY 333
Query: 298 KIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGA 357
+++ Y+ ++Y N ++ITENG C+ + + D +R+ YM +L + + DG
Sbjct: 334 EVLHYL-QKYGNIDIYITENG---ACINDEVVNGKVQDDRRISYMQQHLVQVHRTIHDGL 389
Query: 358 DVRGYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAKHKL 411
V+GY WSLLD+FEW GY RFG+ HVDF T RTPK S WY++ ++ + L
Sbjct: 390 HVKGYMAWSLLDNFEWAEGYNMRFGMIHVDFRTQVRTPKQSYYWYRNVVSNNWL 443
>pdb|1NP2|A Chain A, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
pdb|1NP2|B Chain B, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
Length = 436
Score = 239 bits (610), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 150/411 (36%), Positives = 223/411 (54%), Gaps = 47/411 (11%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
M+SLGV YRFS++W RILP+GR G +N +G+ Y++L+D LL GI PF+TL +D PQ
Sbjct: 66 MQSLGVGVYRFSVAWPRILPEGR-GRINPKGLAFYDRLVDRLLAAGITPFLTLYHWDLPQ 124
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
+ED+ G W S E+ F +A+ ++ DRV ++ T+NEP L + G H P
Sbjct: 125 ALEDR-GGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPWCSAFLGHWTGEHAPGL- 182
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
+ E AAH+L+L H AV+ R + +GI+LN F P
Sbjct: 183 ----------RNLEAALRAAHHLLLGHGLAVEALRAAGAR----RVGIVLN---FAPAYG 225
Query: 181 STADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFIGI 240
D A + A ++ +FLDPI+ YP SRD E + + LDF+G+
Sbjct: 226 E--DPEAVDVADRYHNRYFLDPILGRGYPESPFQDPPPA--PILSRDLEAIARPLDFLGV 281
Query: 241 NHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKII 300
N+Y V PG G ++ P G T + W VYP+G++ ++
Sbjct: 282 NYYAPVRV--------APGTGPLPV---------RYLPPEGPVTAMGW-EVYPEGLYHLL 323
Query: 301 KYIKERYKNTPMFITENGYGEICMPNSST-EDLLNDVKRVEYMASYLDALITAVRDGADV 359
K + R P++ITENG P+ T E ++ D +RV Y+ ++++A + A +G D+
Sbjct: 324 KRLG-REVPWPLYITENG---AAYPDLWTGEAVVEDPERVAYLEAHVEAALRAREEGVDL 379
Query: 360 RGYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAKHK 410
RGYFVWSL+D+FEW +GYT RFGL++VDF + +R PK SA WY+ IA+ +
Sbjct: 380 RGYFVWSLMDNFEWAFGYTRRFGLYYVDFPSQRRIPKRSALWYRERIARAQ 430
>pdb|3AHZ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Tris
pdb|3VIF|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Gluconolactone
pdb|3VIG|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With 1-Deoxynojirimycin
pdb|3VIH|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glycerol
pdb|3VII|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Bis-Tris
Length = 487
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 150/431 (34%), Positives = 220/431 (51%), Gaps = 52/431 (12%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
++ LG YRFSISWAR+LP+G VN +GI++YN LI+ LL GI+P VT+ +D PQ
Sbjct: 75 LKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQ 134
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
++D G W + + +A + FK+FGDRVK W T NEP L++ G
Sbjct: 135 ALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNEP-----LTFMDGYASEIGM 188
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
+ G+ ++AAH +I +HA +Y +++ +QGG +GI LN W EP ++
Sbjct: 189 APSINTPGIGD-----YLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCEPATN 243
Query: 181 STADKLAAERAQSFYMNWFLDPIIY--GKYPAEMMNIVG----------STLPKFSSRDK 228
S D+ + E Q F + + PI G YPA + + V S LP+F++ +
Sbjct: 244 SAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEV 303
Query: 229 EKLKQGLDFIGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEP----- 283
E ++ DF+GIN YT+ G S EG+ + GV L +
Sbjct: 304 EYIRGTHDFLGINFYTALL-------------GKSGVEGYEPSRYRDSGVILTQDAAWPI 350
Query: 284 TTLFWLNVYPQGMWKIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMA 343
+ WL V P G K + +IK Y N P+FITENG+ + LND RV Y
Sbjct: 351 SASSWLKVVPWGFRKELNWIKNEYNNPPVFITENGFSDYGG--------LNDTGRVHYYT 402
Query: 344 SYLDALITAV-RDGADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFA--TLKRTPKLSAT 400
+L ++ A+ DG +V GY WSL+D+FEW GY+ +FG++ VDF R PK SA
Sbjct: 403 EHLKEMLKAIHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESAK 462
Query: 401 WYKHFIAKHKL 411
+ K+
Sbjct: 463 VLAEIMNTRKI 473
>pdb|1TR1|A Chain A, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|B Chain B, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|C Chain C, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|D Chain D, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
Length = 447
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 220/414 (53%), Gaps = 40/414 (9%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
M+ LG+ +YRFS+SW RI P G G+VN +G+++Y++++D L GI+PF TL +D PQ
Sbjct: 67 MKELGIRTYRFSVSWPRIFPNGD-GEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQ 125
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
++D G W + + + F FA+ F+ F ++++W T NEP LS LG H P
Sbjct: 126 ALQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPGLT 184
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
+ + H+L+++H +V +R + G IGI N W P S+
Sbjct: 185 NL-----------QTAIDVGHHLLVAHGLSVRRFR---ELGTSGQIGIAPNVSWAVPYST 230
Query: 181 STADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIV---GSTLPKFSSRDKEKLKQGLDF 237
S DK A R S + +WFL PI G YP +++ G+T+P D + + + +D
Sbjct: 231 SEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVP-IQDGDMDIIGEPIDM 289
Query: 238 IGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMW 297
IGIN+Y+ S + P A GF Q + +G P T V +G++
Sbjct: 290 IGINYYS--------MSVNRFNPEA----GFL----QSEEINMGLPVTDIGWPVESRGLY 333
Query: 298 KIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGA 357
+++ Y+ ++Y N ++ITENG C+ + + D +R+ YM +L + + DG
Sbjct: 334 EVLHYL-QKYGNIDIYITENG---ACINDEVVNGKVQDDRRISYMQQHLVQVHRTIHDGL 389
Query: 358 DVRGYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAKHKL 411
V+GY WSLLD+FEW GY RFG+ HVDF T RTPK S WY++ ++ + L
Sbjct: 390 HVKGYMAWSLLDNFEWAEGYNMRFGMIHVDFRTQVRTPKESYYWYRNVVSNNWL 443
>pdb|3AI0|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With
Para-Nitrophenyl-Beta-D-Glucopyranoside
pdb|3VIM|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIN|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIO|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIP|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
Length = 487
Score = 238 bits (606), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 149/431 (34%), Positives = 220/431 (51%), Gaps = 52/431 (12%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
++ LG YRFSISWAR+LP+G VN +GI++YN LI+ LL GI+P VT+ +D PQ
Sbjct: 75 LKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQ 134
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
++D G W + + +A + FK+FGDRVK W T N+P L++ G
Sbjct: 135 ALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNDP-----LTFMDGYASEIGM 188
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
+ G+ ++AAH +I +HA +Y +++ +QGG +GI LN W EP ++
Sbjct: 189 APSINTPGIGD-----YLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCEPATN 243
Query: 181 STADKLAAERAQSFYMNWFLDPIIY--GKYPAEMMNIVG----------STLPKFSSRDK 228
S D+ + E Q F + + PI G YPA + + V S LP+F++ +
Sbjct: 244 SAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEV 303
Query: 229 EKLKQGLDFIGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEP----- 283
E ++ DF+GIN YT+ G S EG+ + GV L +
Sbjct: 304 EYIRGTHDFLGINFYTALL-------------GKSGVEGYEPSRYRDSGVILTQDAAWPI 350
Query: 284 TTLFWLNVYPQGMWKIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMA 343
+ WL V P G K + +IK Y N P+FITENG+ + LND RV Y
Sbjct: 351 SASSWLKVVPWGFRKELNWIKNEYNNPPVFITENGFSDYGG--------LNDTGRVHYYT 402
Query: 344 SYLDALITAV-RDGADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFA--TLKRTPKLSAT 400
+L ++ A+ DG +V GY WSL+D+FEW GY+ +FG++ VDF R PK SA
Sbjct: 403 EHLKEMLKAIHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESAK 462
Query: 401 WYKHFIAKHKL 411
+ K+
Sbjct: 463 VLAEIMNTRKI 473
>pdb|3VIK|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Cellobiose
pdb|3VIL|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Salicin
Length = 487
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 149/431 (34%), Positives = 219/431 (50%), Gaps = 52/431 (12%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
++ LG YRFSISWAR+LP+G VN +GI++YN LI+ LL GI+P VT+ +D PQ
Sbjct: 75 LKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQ 134
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
++D G W + + +A + FK+FGDRVK W T N P L++ G
Sbjct: 135 ALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNSP-----LTFMDGYASEIGM 188
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
+ G+ ++AAH +I +HA +Y +++ +QGG +GI LN W EP ++
Sbjct: 189 APSINTPGIGD-----YLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCEPATN 243
Query: 181 STADKLAAERAQSFYMNWFLDPIIY--GKYPAEMMNIVG----------STLPKFSSRDK 228
S D+ + E Q F + + PI G YPA + + V S LP+F++ +
Sbjct: 244 SAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEV 303
Query: 229 EKLKQGLDFIGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEP----- 283
E ++ DF+GIN YT+ G S EG+ + GV L +
Sbjct: 304 EYIRGTHDFLGINFYTALL-------------GKSGVEGYEPSRYRDSGVILTQDAAWPI 350
Query: 284 TTLFWLNVYPQGMWKIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMA 343
+ WL V P G K + +IK Y N P+FITENG+ + LND RV Y
Sbjct: 351 SASSWLKVVPWGFRKELNWIKNEYNNPPVFITENGFSDYGG--------LNDTGRVHYYT 402
Query: 344 SYLDALITAV-RDGADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFA--TLKRTPKLSAT 400
+L ++ A+ DG +V GY WSL+D+FEW GY+ +FG++ VDF R PK SA
Sbjct: 403 EHLKEMLKAIHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESAK 462
Query: 401 WYKHFIAKHKL 411
+ K+
Sbjct: 463 VLAEIMNTRKI 473
>pdb|3VIJ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glucose
Length = 487
Score = 236 bits (603), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 149/431 (34%), Positives = 219/431 (50%), Gaps = 52/431 (12%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
++ LG YRFSISWAR+LP+G VN +GI++YN LI+ LL GI+P VT+ +D PQ
Sbjct: 75 LKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQ 134
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
++D G W + + +A + FK+FGDRVK W T N P L++ G
Sbjct: 135 ALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNAP-----LTFMDGYASEIGM 188
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
+ G+ ++AAH +I +HA +Y +++ +QGG +GI LN W EP ++
Sbjct: 189 APSINTPGIGD-----YLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCEPATN 243
Query: 181 STADKLAAERAQSFYMNWFLDPIIY--GKYPAEMMNIVG----------STLPKFSSRDK 228
S D+ + E Q F + + PI G YPA + + V S LP+F++ +
Sbjct: 244 SAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTAEEV 303
Query: 229 EKLKQGLDFIGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEP----- 283
E ++ DF+GIN YT+ G S EG+ + GV L +
Sbjct: 304 EYIRGTHDFLGINFYTALL-------------GKSGVEGYEPSRYRDSGVILTQDAAWPI 350
Query: 284 TTLFWLNVYPQGMWKIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMA 343
+ WL V P G K + +IK Y N P+FITENG+ + LND RV Y
Sbjct: 351 SASSWLKVVPWGFRKELNWIKNEYNNPPVFITENGFSDYGG--------LNDTGRVHYYT 402
Query: 344 SYLDALITAV-RDGADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFA--TLKRTPKLSAT 400
+L ++ A+ DG +V GY WSL+D+FEW GY+ +FG++ VDF R PK SA
Sbjct: 403 EHLKEMLKAIHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESAK 462
Query: 401 WYKHFIAKHKL 411
+ K+
Sbjct: 463 VLAEIMNTRKI 473
>pdb|3CMJ|A Chain A, Crystal Structure Of Engineered Beta-Glucosidase From Soil
Metagenome
Length = 465
Score = 235 bits (599), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 142/412 (34%), Positives = 207/412 (50%), Gaps = 37/412 (8%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
M LG+ +YRFSI+WARI P +N G++ Y +L++ L + I P TL +D PQ
Sbjct: 88 MRQLGLKTYRFSIAWARIQPDSSR-QINQRGLDFYRRLVEGLHKRDILPMATLYHWDLPQ 146
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
+ED+ G WLS ES F + + GD++ W T NEP + V Y +G P
Sbjct: 147 WVEDE-GGWLSRESASRFAEYTHALVAALGDQIPLWVTHNEPMVTVWAGYHMGLFAPGLK 205
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
G AH+L+LSH A+ +R G +GI LN P+S+
Sbjct: 206 DPTLGGR-----------VAHHLLLSHGQALQAFRAL--SPAGSQMGITLNFNTIYPVSA 252
Query: 181 STADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKF-SSRDKEKLKQGLDFIG 239
AD AA R SF FL+P+I G+Y + + LP+F + D + + +DF+G
Sbjct: 253 EPADVEAARRMHSFQNELFLEPLIRGQYNQATL-MAYPNLPEFIAPEDMQTISAPIDFLG 311
Query: 240 INHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKI 299
+N+Y V+ S PG + E P T + P+G++ +
Sbjct: 312 VNYYNPMRVKS---SPQPPGIEVVQVE---------------SPVTAMGWEIAPEGLYDL 353
Query: 300 IKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADV 359
+ I Y P++ITENG P+ S + +ND +RV Y ++ A A+ DG D+
Sbjct: 354 LMGITRTYGKLPIYITENGAAFDDQPDQSGQ--VNDPQRVGYFQGHIGAARRALADGVDL 411
Query: 360 RGYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAKHKL 411
RGY+ WSLLD+FEW GY+ RFG+ +VDF T +RT K SA WY+ IA + L
Sbjct: 412 RGYYAWSLLDNFEWAEGYSKRFGIIYVDFETQQRTLKQSAQWYRDVIANNGL 463
>pdb|1UG6|A Chain A, Structure Of Beta-Glucosidase At Atomic Resolution From
Thermus Thermophilus Hb8
Length = 431
Score = 235 bits (599), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 147/411 (35%), Positives = 223/411 (54%), Gaps = 47/411 (11%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
M+SLGV +YRFS++W RILP+GR G +N +G+ Y++L+D LL GI PF+TL +D P
Sbjct: 66 MQSLGVRAYRFSVAWPRILPEGR-GRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPL 124
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
+E++ G W S E+ F +A+ ++ DRV ++ T+NEP L + G H P
Sbjct: 125 ALEER-GGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPWCSAFLGHWTGEHAPGL- 182
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
+ E AAH+L+L H AV+ R + +GI+LN F P
Sbjct: 183 ----------RNLEAALRAAHHLLLGHGLAVEALRAAGAR----RVGIVLN---FAPAYG 225
Query: 181 STADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFIGI 240
D A + A ++ +FLDPI+ YP SRD E + + LDF+G+
Sbjct: 226 E--DPEAVDVADRYHNRFFLDPILGKGYPESPFRDPPPV--PILSRDLELVARPLDFLGV 281
Query: 241 NHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKII 300
N+Y V PG G ++ P G T + W VYP+G++ ++
Sbjct: 282 NYYAPVRV--------APGTGTLPV---------RYLPPEGPATAMGW-EVYPEGLYHLL 323
Query: 301 KYIKERYKNTPMFITENGYGEICMPNSST-EDLLNDVKRVEYMASYLDALITAVRDGADV 359
K + R P+++TENG P+ T E ++ D +RV Y+ ++++A + A +G D+
Sbjct: 324 KRLG-REVPWPLYVTENG---AAYPDLWTGEAVVEDPERVAYLEAHVEAALRAREEGVDL 379
Query: 360 RGYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAKHK 410
RGYFVWSL+D+FEW +GYT RFGL++VDF + +R PK SA WY+ IA+ +
Sbjct: 380 RGYFVWSLMDNFEWAFGYTRRFGLYYVDFPSQRRIPKRSALWYRERIARAQ 430
>pdb|1GNX|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GNX|B Chain B, B-Glucosidase From Streptomyces Sp
pdb|1GON|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GON|B Chain B, B-Glucosidase From Streptomyces Sp
Length = 479
Score = 235 bits (599), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 147/406 (36%), Positives = 209/406 (51%), Gaps = 22/406 (5%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
M LG+ +YRFS++W RI P GR G +G++ Y +L D LL KGIQP TL +D PQ
Sbjct: 80 MAELGLGAYRFSLAWPRIQPTGR-GPALQKGLDFYRRLADELLAKGIQPVATLYHWDLPQ 138
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
E+E+ G W + E F +A I + GDRVK W T+NEP L Y G H P
Sbjct: 139 ELENA-GGWPERATAERFAEYAAIAADALGDRVKTWTTLNEPWCSAFLGYGSGVHAPGR- 196
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
+ P AAH+L L H AV R + D + LN P++
Sbjct: 197 TDPVAALR----------AAHHLNLGHGLAVQALRDRLPAD--AQCSVTLNIHHVRPLTD 244
Query: 181 STADKLAAERAQSFYMNWFLDPIIYGKYPAEMM-NIVGSTLPKFSSRDKEKLK-QGLDFI 238
S AD A R + F P++ G YP +++ + G T F +L Q LDF+
Sbjct: 245 SDADADAVRRIDALANRVFTGPMLQGAYPEDLVKDTAGLTDWSFVRDGDLRLAHQKLDFL 304
Query: 239 GINHYTSTYVQDCIFSAC--KPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGM 296
G+N+Y+ T V + S G G S + + P GE T + W V P G+
Sbjct: 305 GVNYYSPTLVSEADGSGTHNSDGHGRSAHSPWPGADRVAFHQPPGETTAMGWA-VDPSGL 363
Query: 297 WKIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDG 356
+++++ + + P+ ITENG + E +ND +R+ Y+ +L A+ A++DG
Sbjct: 364 YELLRRLSSDFPALPLVITENG--AAFHDYADPEGNVNDPERIAYVRDHLAAVHRAIKDG 421
Query: 357 ADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWY 402
+DVRGYF+WSLLD+FEW +GY+ RFG +VD+ T R PK SA WY
Sbjct: 422 SDVRGYFLWSLLDNFEWAHGYSKRFGAVYVDYPTGTRIPKASARWY 467
>pdb|4HZ6|A Chain A, Crystal Structure Of Bglb
pdb|4HZ7|A Chain A, Crystal Structure Of Bglb With Glucose
pdb|4HZ8|A Chain A, Crystal Structure Of Bglb With Natural Substrate
Length = 444
Score = 234 bits (598), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 142/412 (34%), Positives = 207/412 (50%), Gaps = 37/412 (8%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
M LG+ +YRFSI+WARI P +N G++ Y +L++ L + I P TL +D PQ
Sbjct: 67 MRQLGLKTYRFSIAWARIQPDSSR-QINQRGLDFYRRLVEGLHKRDILPMATLYHWDLPQ 125
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
+ED+ G WLS ES F + + GD++ W T NEP + V Y +G P
Sbjct: 126 WVEDE-GGWLSRESASRFAEYTHALVAALGDQIPLWVTHNEPMVTVWAGYHMGLFAPGLK 184
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
G AH+L+LSH A+ +R G +GI LN P+S+
Sbjct: 185 DPTLGGR-----------VAHHLLLSHGQALQAFRAL--SPAGSQMGITLNFNTIYPVSA 231
Query: 181 STADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKF-SSRDKEKLKQGLDFIG 239
AD AA R SF FL+P+I G+Y + + LP+F + D + + +DF+G
Sbjct: 232 EPADVEAARRMHSFQNELFLEPLIRGQYNQATL-MAYPNLPEFIAPEDMQTISAPIDFLG 290
Query: 240 INHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKI 299
+N+Y V+ S PG + E P T + P+G++ +
Sbjct: 291 VNYYNPMRVKS---SPQPPGIEVVQVE---------------SPVTAMGWEIAPEGLYDL 332
Query: 300 IKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADV 359
+ I Y P++ITENG P+ S + +ND +RV Y ++ A A+ DG D+
Sbjct: 333 LMGITRTYGKLPIYITENGAAFDDQPDQSGQ--VNDPQRVGYFQGHIGAARRALADGVDL 390
Query: 360 RGYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAKHKL 411
RGY+ WSLLD+FEW GY+ RFG+ +VDF T +RT K SA WY+ IA + L
Sbjct: 391 RGYYAWSLLDNFEWAEGYSKRFGIIYVDFETQQRTLKQSAQWYRDVIANNGL 442
>pdb|3ZJK|A Chain A, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|B Chain B, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|C Chain C, Crystal Structure Of Ttb-gly F401s Mutant
Length = 431
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 146/411 (35%), Positives = 221/411 (53%), Gaps = 47/411 (11%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
M+SLGV +YRFS++W RILP+GR G +N +G+ Y++L+D LL GI PF+TL +D P
Sbjct: 66 MQSLGVRAYRFSVAWPRILPEGR-GRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPL 124
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
+E++ G W S E+ F +A+ ++ DRV ++ T+NEP L + G H P
Sbjct: 125 ALEER-GGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPWCSAFLGHWTGEHAPGL- 182
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
+ E AAH+L+L H AV+ R + +GI+LN F P
Sbjct: 183 ----------RNLEAALRAAHHLLLGHGLAVEALRAAGAR----RVGIVLN---FAPAYG 225
Query: 181 STADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFIGI 240
D A + A ++ +FLDPI+ YP SRD E + + LDF+G+
Sbjct: 226 E--DPEAVDVADRYHNRFFLDPILGKGYPESPFRDPPPV--PILSRDLELVARPLDFLGV 281
Query: 241 NHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKII 300
N+Y V PG G ++ P G T + W VYP+G+ ++
Sbjct: 282 NYYAPVRV--------APGTGTLPV---------RYLPPEGPATAMGW-EVYPEGLHHLL 323
Query: 301 KYIKERYKNTPMFITENGYGEICMPNSST-EDLLNDVKRVEYMASYLDALITAVRDGADV 359
K + R P+++TENG P+ T E ++ D +RV Y+ ++++A + A +G D+
Sbjct: 324 KRLG-REVPWPLYVTENG---AAYPDLWTGEAVVEDPERVAYLEAHVEAALRAREEGVDL 379
Query: 360 RGYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAKHK 410
RGYFVWSL+D+FEW +GYT R GL++VDF + +R PK SA WY+ IA+ +
Sbjct: 380 RGYFVWSLMDNFEWAFGYTRRSGLYYVDFPSQRRIPKRSALWYRERIARAQ 430
>pdb|1WCG|A Chain A, Aphid Myrosinase
pdb|1WCG|B Chain B, Aphid Myrosinase
Length = 464
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 139/424 (32%), Positives = 217/424 (51%), Gaps = 42/424 (9%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
++ L + YRFSISWARI P G + +GI +YN LI+ L+ I P VT+ +D PQ
Sbjct: 68 IKDLNLKFYRFSISWARIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYHWDLPQ 127
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
++D G W++P + F +A + F FGDRVK+W T NEP + V Y + + P
Sbjct: 128 YLQD-LGGWVNPIMSDYFKEYARVLFTYFGDRVKWWITFNEP-IAVCKGYSIKAYAPNLN 185
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
+ G+ ++A H +++H A +Y ++ Q G I I ++ ++F P ++
Sbjct: 186 LKTTGH----------YLAGHTQLIAHGKAYRLYEEMFKPTQNGKISISISGVFFMPKNA 235
Query: 181 STADKL-AAERAQSFYMNWFLDPIIYGKYPAEMMNIVG----------STLPKFSSRDKE 229
+ D + AERA F WF P+ G YP M V S LPKF+ + +
Sbjct: 236 ESDDDIETAERANQFERGWFGHPVYKGDYPPIMKKWVDQKSKEEGLPWSKLPKFTKDEIK 295
Query: 230 KLKQGLDFIGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWL 289
LK DF +NHY+S V P P + + + P P +
Sbjct: 296 LLKGTADFYALNHYSSRLVT----FGSDPNPNFNPDASYVTSVDEAWLKPNETPYII--- 348
Query: 290 NVYPQGMWKIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDAL 349
P+G+ K++ ++K Y N + ITENGYG+ + L+D +++ Y+ +YL+A
Sbjct: 349 -PVPEGLRKLLIWLKNEYGNPQLLITENGYGD--------DGQLDDFEKISYLKNYLNAT 399
Query: 350 ITAV-RDGADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFATLK--RTPKLSATWYKHFI 406
+ A+ D +V GY VWSLLD+FEW YGY+ FGL +DF + RT + S T++K+ +
Sbjct: 400 LQAMYEDKCNVIGYTVWSLLDNFEWFYGYSIHFGLVKIDFNDPQRTRTKRESYTYFKNVV 459
Query: 407 AKHK 410
+ K
Sbjct: 460 STGK 463
>pdb|1PBG|A Chain A, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|1PBG|B Chain B, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|3PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-C
pdb|3PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-C
Length = 468
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/414 (33%), Positives = 210/414 (50%), Gaps = 30/414 (7%)
Query: 2 ESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQE 61
E GVN R SI+W+RI P G +G+VN +G+ Y+KL + ++PFVTL FD+P+
Sbjct: 64 EEYGVNGIRISIAWSRIFPTG-YGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEA 122
Query: 62 IEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCS 121
+ G +L+ E+ E F +A CF+ F + V YW T NE Y +G PP
Sbjct: 123 LHSN-GDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPPG-IK 179
Query: 122 QPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISSS 181
F + HN+++SHA AV +Y+ K K + G + + ++P +
Sbjct: 180 YDLAKV---------FQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPYDP--EN 228
Query: 182 TADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPK----FSSRDKE-----KLK 232
AD AAE + + LD G Y + M V L + RD++ K
Sbjct: 229 PADVRAAELEDIIHNKFILDATYLGHYSDKTMEGVNHILAENGGELDLRDEDFQALDAAK 288
Query: 233 QGLDFIGINHYTSTYVQ--DCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLN 290
DF+GIN+Y S ++Q D G G + + ++ + P P T +
Sbjct: 289 DLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRVAPDYVPRTDWDWI 348
Query: 291 VYPQGMWKIIKYIKERYKN-TPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDAL 349
+YP+G++ I +K Y N ++ITENG G + ++ + D R++Y+ +L+ L
Sbjct: 349 IYPEGLYDQIMRVKNDYPNYKKIYITENGLG---YKDEFVDNTVYDDGRIDYVKQHLEVL 405
Query: 350 ITAVRDGADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYK 403
A+ DGA+V+GYF+WSL+D F W+ GY R+GL +VDF T +R PK SA WYK
Sbjct: 406 SDAIADGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFDTQERYPKKSAHWYK 459
>pdb|2PBG|A Chain A, 6-Phospho-Beta-D-Galactosidase Form-B
Length = 468
Score = 205 bits (521), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 137/414 (33%), Positives = 210/414 (50%), Gaps = 30/414 (7%)
Query: 2 ESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQE 61
E GVN R SI+W+RI P G +G+VN +G+ Y+KL + ++PFVTL FD+P+
Sbjct: 64 EEYGVNGIRISIAWSRIFPTG-YGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEA 122
Query: 62 IEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCS 121
+ G +L+ E+ E F +A CF+ F + V YW T NE Y +G PP
Sbjct: 123 LHSN-GDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPPG-IK 179
Query: 122 QPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISSS 181
Q + HN+++SHA AV +Y+ K K + G + + ++P +
Sbjct: 180 YDLAKVFQSH---------HNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPYDP--EN 228
Query: 182 TADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPK----FSSRDKE-----KLK 232
AD AAE + + LD G Y + M V L + RD++ K
Sbjct: 229 PADVRAAELEDIIHNKFILDATYLGHYCDKTMEGVNHILAENGGELDLRDEDFQALDAAK 288
Query: 233 QGLDFIGINHYTSTYVQ--DCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLN 290
DF+GIN+Y S ++Q D G G + + ++ + P P T +
Sbjct: 289 DLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRVAPDYVPRTDWDWI 348
Query: 291 VYPQGMWKIIKYIKERYKN-TPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDAL 349
+YP+G++ I +K Y N ++ITENG G + ++ + D R++Y+ +L+ L
Sbjct: 349 IYPEGLYDQIMRVKNDYPNYKKIYITENGLG---YKDEFVDNTVYDDGRIDYVKQHLEVL 405
Query: 350 ITAVRDGADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYK 403
A+ DGA+V+GYF+WSL+D F W+ GY R+GL +VDF T +R PK SA WYK
Sbjct: 406 SDAIADGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFDTQERYPKKSAHWYK 459
>pdb|4PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-Cst
pdb|4PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-Cst
Length = 468
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 136/414 (32%), Positives = 209/414 (50%), Gaps = 30/414 (7%)
Query: 2 ESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQE 61
E GVN R SI+W+RI P G +G+VN +G+ Y+KL + ++PFVTL FD+P+
Sbjct: 64 EEYGVNGIRISIAWSRIFPTG-YGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEA 122
Query: 62 IEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCS 121
+ G +L+ E+ E F +A CF+ F + V YW T NE Y +G PP
Sbjct: 123 LHSN-GDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPPG-IK 179
Query: 122 QPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISSS 181
Q + HN+++SHA AV +Y+ K K + G + + ++P +
Sbjct: 180 YDLAKVFQSH---------HNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPYDP--EN 228
Query: 182 TADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPK----FSSRDKE-----KLK 232
AD AAE + + LD G Y + M V L + RD++ K
Sbjct: 229 PADVRAAELEDIIHNKFILDATYLGHYSDKTMEGVNHILAENGGELDLRDEDFQALDAAK 288
Query: 233 QGLDFIGINHYTSTYVQ--DCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLN 290
DF+GIN+Y S ++Q D G G + + ++ + P P T +
Sbjct: 289 DLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRVAPDYVPRTDWDWI 348
Query: 291 VYPQGMWKIIKYIKERYKN-TPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDAL 349
+YP+G++ I +K Y N ++IT NG G + ++ + D R++Y+ +L+ L
Sbjct: 349 IYPEGLYDQIMRVKNDYPNYKKIYITCNGLG---YKDEFVDNTVYDDGRIDYVKQHLEVL 405
Query: 350 ITAVRDGADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYK 403
A+ DGA+V+GYF+WSL+D F W+ GY R+GL +VDF T +R PK SA WYK
Sbjct: 406 SDAIADGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDFDTQERYPKKSAHWYK 459
>pdb|4B3K|A Chain A, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|B Chain B, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|C Chain C, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|D Chain D, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|E Chain E, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|F Chain F, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|A Chain A, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|B Chain B, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|C Chain C, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|D Chain D, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|E Chain E, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|F Chain F, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
Length = 479
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 127/419 (30%), Positives = 202/419 (48%), Gaps = 27/419 (6%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
+ SLG NSYR SI W R++ +N +G+ +YN++IDA L GI+P + L FD P
Sbjct: 64 LASLGHNSYRTSIQWTRLIDDFEQATINPDGLAYYNRVIDACLANGIRPVINLHHFDLPI 123
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
+ YG W S + F F+ +CF+ FGDRVK WF NEP + V SY + H PA
Sbjct: 124 ALYQAYGGWESKHVVDLFVAFSKVCFEQFGDRVKDWFVHNEPMVVVEGSYLMQFHYPAIV 183
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
++ A+NL L+ A + YR + G IG ILN P S
Sbjct: 184 DG-----------KKAVQVAYNLALATAKVIQAYRRGPAELSDGRIGTILNLTPAYPASQ 232
Query: 181 STADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEK---LKQGLDF 237
S AD AA A+ + + F++ ++GK+P E++ ++ + S +E + +D+
Sbjct: 233 SEADMAAAHFAELWNNDLFMEAAVHGKFPEELVAVLKKDGVLWQSTPEELALIAENRVDY 292
Query: 238 IGINHYTSTYVQ--DCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQG 295
+G+N Y V+ D I P L ++ V G +YP+
Sbjct: 293 LGLNFYHPKRVKAPDAI-PVISPSWSPEWYYDPYLMPGRRMNVDKG-------WEIYPEA 344
Query: 296 MWKIIKYIKERYKNTPMFITENGYGEICMPNSSTEDL--LNDVKRVEYMASYLDALITAV 353
++ I +++ Y N P F++ENG G I + ++ + D R++++ +L L +
Sbjct: 345 VYDIAIKMRDHYDNIPWFLSENGVG-ISGEDRYRDETGQIQDDYRIQFLKEHLTYLHKGI 403
Query: 354 RDGADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAKHKLI 412
G++ GY VW+ +D + W Y R+GL + T R PK SA W+K ++LI
Sbjct: 404 EAGSNCFGYHVWTPIDGWSWLNAYKNRYGLVENNIHTQVRRPKASAYWFKKVATHNRLI 462
>pdb|1VFF|A Chain A, Beta-Glycosidase From Pyrococcus Horikoshii
Length = 423
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 136/420 (32%), Positives = 201/420 (47%), Gaps = 64/420 (15%)
Query: 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQ 60
M SLG N+YRFSI W+R+ P+ N + Y ++ID LL +GI P VTL F SP
Sbjct: 59 MTSLGYNAYRFSIEWSRLFPEE--NKFNEDAFMKYREIIDLLLTRGITPLVTLHHFTSPL 116
Query: 61 EIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHC 120
K G +L E+ + + + + ++VK T NEP + V + Y L + P
Sbjct: 117 WFMKK-GGFLREENLKHWEKYIEKV-AELLEKVKLVATFNEPMVYVMMGY-LTAYWPPFI 173
Query: 121 SQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISS 180
PF + F A NL+ +HA A ++ K++ +GI+ N P S
Sbjct: 174 RSPF----------KAFKVAANLLKAHAIAYELLHGKFK------VGIVKNIPIILPASD 217
Query: 181 STADKLAAERAQSFYMNW-FLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFIG 239
D+ AAE+A + + NW FLD I GKY +P+ + DFIG
Sbjct: 218 KERDRKAAEKADNLF-NWHFLDAIWSGKYRGVFKTY---RIPQSDA----------DFIG 263
Query: 240 INHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKI 299
+N+YT++ V+ P E S++ T + W +VYP+G++
Sbjct: 264 VNYYTASEVRHTW------NPLKFFFEVKLADISERK-------TQMGW-SVYPKGIYMA 309
Query: 300 IKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADV 359
+K K P++ITENG L+D RVE++ +L + A+ DG DV
Sbjct: 310 LK--KASRYGRPLYITENGIAT-----------LDDEWRVEFIIQHLQYVHKAIEDGLDV 356
Query: 360 RGYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAKHKLIKSQSPKH 419
RGYF WS +D++EW G+ RFGL VD+ T +R P+ SA Y IA+ K IK + K
Sbjct: 357 RGYFYWSFMDNYEWKEGFGPRFGLVEVDYQTFERRPRKSAYVYGE-IARSKEIKDELLKR 415
>pdb|4F66|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate.
pdb|4F66|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate
Length = 480
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 204/421 (48%), Gaps = 43/421 (10%)
Query: 3 SLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEI 62
+G +R SI+W RI PKG + N G+ Y+ L D L GI+P VTL+ F+ P +
Sbjct: 81 EMGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGIEPVVTLSHFELPYHL 140
Query: 63 EDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQ 122
+YG + + + + F +FA++CF+ + D+VKYW T NE N Q
Sbjct: 141 VTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWMTFNEINNQANYQEDFA--------- 191
Query: 123 PFGNCS----QGNSEEE-PFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEP 177
PF N +G+ E + AAH +++ A AV I + + +IG ++ P
Sbjct: 192 PFTNSGIVYKEGDDREAIMYQAAHYELVASARAVKI---GHAINPNLNIGCMVAMCPIYP 248
Query: 178 ISSSTADKLAAERA-QSFYMNWFLDPIIYGKYPAEMMNIVGSTLPK--FSSRDKEKLKQG 234
+ + D L A++A Q Y +F D ++G YP + K F+ RDK+ L +G
Sbjct: 249 ATCNPKDILMAQKAMQKRY--YFADVHVHGFYPEHIFKYWERKAIKVDFTERDKKDLFEG 306
Query: 235 -LDFIGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYP 293
+D+IG ++Y S +V D P +TE P + + W + P
Sbjct: 307 TVDYIGFSYYMS-FVIDA-HRENNPYYDYLETEDLVKN-------PYVKASDWDW-QIDP 356
Query: 294 QGMWKIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAV 353
QG+ + + + Y + P+FI ENG+G I + +++D R++Y+ +++ +I AV
Sbjct: 357 QGLRYALNWFTDMY-HLPLFIVENGFGAI--DQVEADGMVHDDYRIDYLGAHIKEMIKAV 413
Query: 354 -RDGADVRGYFVWSLLDSFEWTYG-YTARFGLHHVD-----FATLKRTPKLSATWYKHFI 406
DG ++ GY W +D G R+G +VD TLKR+PKLS WYK I
Sbjct: 414 DEDGVELMGYTPWGCIDLVSAGTGEMRKRYGFIYVDKDDEGKGTLKRSPKLSFNWYKEVI 473
Query: 407 A 407
A
Sbjct: 474 A 474
>pdb|4F79|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase Mutant
(E375q) In Complex With Salicin 6-Phosphate
pdb|4GPN|A Chain A, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate.
pdb|4GPN|B Chain B, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate
Length = 480
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 127/421 (30%), Positives = 204/421 (48%), Gaps = 43/421 (10%)
Query: 3 SLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEI 62
+G +R SI+W RI PKG + N G+ Y+ L D L GI+P VTL+ F+ P +
Sbjct: 81 EMGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGIEPVVTLSHFELPYHL 140
Query: 63 EDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQ 122
+YG + + + + F +FA++CF+ + D+VKYW T NE N Q
Sbjct: 141 VTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWMTFNEINNQANYQEDFA--------- 191
Query: 123 PFGNCS----QGNSEEE-PFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEP 177
PF N +G+ E + AAH +++ A AV I + + +IG ++ P
Sbjct: 192 PFTNSGIVYKEGDDREAIMYQAAHYELVASARAVKI---GHAINPNLNIGCMVAMCPIYP 248
Query: 178 ISSSTADKLAAERA-QSFYMNWFLDPIIYGKYPAEMMNIVGSTLPK--FSSRDKEKLKQG 234
+ + D L A++A Q Y +F D ++G YP + K F+ RDK+ L +G
Sbjct: 249 ATCNPKDILMAQKAMQKRY--YFADVHVHGFYPEHIFKYWERKAIKVDFTERDKKDLFEG 306
Query: 235 -LDFIGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYP 293
+D+IG ++Y S +V D P +TE P + + W + P
Sbjct: 307 TVDYIGFSYYMS-FVIDA-HRENNPYYDYLETEDLVKN-------PYVKASDWDW-QIDP 356
Query: 294 QGMWKIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAV 353
QG+ + + + Y + P+FI +NG+G I + +++D R++Y+ +++ +I AV
Sbjct: 357 QGLRYALNWFTDMY-HLPLFIVQNGFGAI--DQVEADGMVHDDYRIDYLGAHIKEMIKAV 413
Query: 354 -RDGADVRGYFVWSLLDSFEWTYG-YTARFGLHHVD-----FATLKRTPKLSATWYKHFI 406
DG ++ GY W +D G R+G +VD TLKR+PKLS WYK I
Sbjct: 414 DEDGVELMGYTPWGCIDLVSAGTGEMRKRYGFIYVDKDDEGKGTLKRSPKLSFNWYKEVI 473
Query: 407 A 407
A
Sbjct: 474 A 474
>pdb|3PN8|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
pdb|3PN8|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
Length = 480
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/419 (30%), Positives = 200/419 (47%), Gaps = 43/419 (10%)
Query: 5 GVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIED 64
G +R SI+W RI PKG + N G+ Y+ L D L GI+P VTL+ F+ P +
Sbjct: 83 GFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGIEPVVTLSHFELPYHLVT 142
Query: 65 KYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPF 124
+YG + + + + F +FA++CF+ + D+VKYW T NE N Q PF
Sbjct: 143 EYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWXTFNEINNQANYQEDFA---------PF 193
Query: 125 GNCS----QGNSEEE-PFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPIS 179
N +G+ E + AAH +++ A AV I + + +IG + P +
Sbjct: 194 TNSGIVYKEGDDREAIXYQAAHYELVASARAVKI---GHAINPNLNIGCXVAXCPIYPAT 250
Query: 180 SSTADKLAAERA-QSFYMNWFLDPIIYGKYPAEMMNIVGSTLPK--FSSRDKEKLKQG-L 235
+ D L A++A Q Y +F D ++G YP + K F+ RDK+ L +G +
Sbjct: 251 CNPKDILXAQKAXQKRY--YFADVHVHGFYPEHIFKYWERKAIKVDFTERDKKDLFEGTV 308
Query: 236 DFIGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQG 295
D+IG ++Y S +V D P +TE P + + W + PQG
Sbjct: 309 DYIGFSYYXS-FVIDA-HRENNPYYDYLETEDLVKN-------PYVKASDWDW-QIDPQG 358
Query: 296 MWKIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAV-R 354
+ + + + Y + P+FI ENG+G I + ++D R++Y+ +++ I AV
Sbjct: 359 LRYALNWFTDXY-HLPLFIVENGFGAI--DQVEADGXVHDDYRIDYLGAHIKEXIKAVDE 415
Query: 355 DGADVRGYFVWSLLDSFEWTYG-YTARFGLHHVD-----FATLKRTPKLSATWYKHFIA 407
DG ++ GY W +D G R+G +VD TLKR+PKLS WYK IA
Sbjct: 416 DGVELXGYTPWGCIDLVSAGTGEXRKRYGFIYVDKDDEGKGTLKRSPKLSFNWYKEVIA 474
>pdb|3QOM|A Chain A, Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Lactobacillus Plantarum
pdb|4GZE|A Chain A, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|B Chain B, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|C Chain C, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|D Chain D, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|E Chain E, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|F Chain F, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
Length = 481
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 123/413 (29%), Positives = 192/413 (46%), Gaps = 35/413 (8%)
Query: 5 GVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIED 64
G +R SI+W RI P G + N G+ Y+ L D L GIQP VTL F+ P +
Sbjct: 87 GFKCFRTSIAWTRIFPNGDESEPNEAGLQFYDDLFDECLKNGIQPVVTLAHFEXPYHLVK 146
Query: 65 KYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPF 124
+YG W + + + + FA +CF+ + D+V YW T NE N Q +
Sbjct: 147 QYGGWRNRKLIQFYLNFAKVCFERYRDKVTYWXTFNEINNQTNFESDGAXLTDSGIIHQP 206
Query: 125 GNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISSSTAD 184
G N E + AAH +++ A AV + +Q + IG + P++++ AD
Sbjct: 207 GE----NRERWXYQAAHYELVASAAAVQL---GHQINPDFQIGCXIAXCPIYPLTAAPAD 259
Query: 185 KLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTL--PKFSSRDKEKLKQG-LDFIGIN 241
L A+RA +F D G YP + N S ++ D + L+ G +D+IG +
Sbjct: 260 VLFAQRAXQTRF-YFADVHCNGTYPQWLRNRFESEHFNLDITAEDLKILQAGTVDYIGFS 318
Query: 242 HYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKIIK 301
+Y S V+D G A E ++N P + + W V P G+
Sbjct: 319 YYXSFTVKDT-------GKLAYNEEHDLVKN------PYVKASDWGW-QVDPVGLRYAXN 364
Query: 302 YIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAV-RDGADVR 360
+ +RY + P+FI ENG G I + ++ ++D R++Y+ +L + AV DG D+
Sbjct: 365 WFTDRY-HLPLFIVENGLGAI--DKKTADNQIHDDYRIDYLTDHLRQIKLAVLEDGVDLI 421
Query: 361 GYFVWSLLDSFEWTYG-YTARFGLHHVD-----FATLKRTPKLSATWYKHFIA 407
GY W +D + G + R+G +VD +LKR K S TW++H IA
Sbjct: 422 GYTPWGCIDLVAASTGQXSKRYGFIYVDENDDGSGSLKRYKKDSFTWFQHVIA 474
>pdb|2XHY|A Chain A, Crystal Structure Of E.Coli Bgla
pdb|2XHY|B Chain B, Crystal Structure Of E.Coli Bgla
pdb|2XHY|C Chain C, Crystal Structure Of E.Coli Bgla
pdb|2XHY|D Chain D, Crystal Structure Of E.Coli Bgla
Length = 479
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 198/426 (46%), Gaps = 51/426 (11%)
Query: 3 SLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEI 62
+G +R SI+W RI PKG N EG+ Y+ + D LL I+P +TL+ F+ P +
Sbjct: 82 EMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHL 141
Query: 63 EDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQ 122
+YG+W + + + F FA++ F+ + +VKYW T NE N Q L
Sbjct: 142 VQQYGSWTNRKVVDFFVRFAEVVFERYKHKVKYWMTFNEINNQRNWRAPL---------- 191
Query: 123 PFGNCSQG-------NSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWF 175
FG C G N EE + H+ ++ A AV R + + +G +L +
Sbjct: 192 -FGYCCSGVVYTEHENPEETMYQVLHHQFVASALAVKAAR---RINPEMKVGCMLAMVPL 247
Query: 176 EPISSSTADKL-AAERAQSFYMNWFLDPIIYGKYPAEMMN---IVGSTLPKFSSRDKEKL 231
P S + D + A E + Y+ F D + G YP+ ++N G + K D + L
Sbjct: 248 YPYSCNPDDVMFAQESMRERYV--FTDVQLRGYYPSYVLNEWERRGFNI-KMEDGDLDVL 304
Query: 232 KQG-LDFIGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLN 290
++G D++G ++Y + V+ + G S EG P + + W
Sbjct: 305 REGTCDYLGFSYYMTNAVK----AEGGTGDAISGFEGSVPN-------PYVKASDWGW-Q 352
Query: 291 VYPQGMWKIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALI 350
+ P G+ + + ERY+ P+FI ENG+G + +ND R++Y+ ++++ +
Sbjct: 353 IDPVGLRYALCELYERYQR-PLFIVENGFG--AYDKVEEDGSINDDYRIDYLRAHIEEMK 409
Query: 351 TAVR-DGADVRGYFVWSLLDSFEWTYG-YTARFGLHHVD-----FATLKRTPKLSATWYK 403
AV DG D+ GY W +D +T G Y+ R+G +V+ + R+ K S WYK
Sbjct: 410 KAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDDGTGDMSRSRKKSFNWYK 469
Query: 404 HFIAKH 409
IA +
Sbjct: 470 EVIASN 475
>pdb|4HA3|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Tris
pdb|4HA4|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Glycerol
Length = 489
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 125/456 (27%), Positives = 201/456 (44%), Gaps = 97/456 (21%)
Query: 2 ESLGVNSYRFSISWARILPKGRF---------GD------------------VNSEGINH 34
+++G+ + R + W+RI P+ F GD N + INH
Sbjct: 71 QAMGLTAARIGVEWSRIFPRPTFDVKVDAEVKGDDVLSVYVSEGALEQLDKMANRDAINH 130
Query: 35 YNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYG----------AWLSPESQEDFGYFADI 84
Y ++ L +GI + L + P + D WL + +F F+
Sbjct: 131 YREMFSDLRSRGITFILNLYHWPLPLWLHDPIAIRRGNLSAPSGWLDVRTVIEFAKFSAY 190
Query: 85 CFKSFGDRVKYWFTINEPNMQVTLSY---RLGCHPPAHCSQPFGNCSQGNSEEEPFIAAH 141
D V + T+NEPN+ L Y + G P C + G A
Sbjct: 191 VAWKLDDLVYMYSTMNEPNVVWGLGYAAVKSGFPPGYLCLECAGR------------AMK 238
Query: 142 NLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISSSTADKLAAERAQSFYMNW-FL 200
NL+ +HA A D + +K +G+I F P++ AD+ AAERA+ F W F
Sbjct: 239 NLVQAHARAYDAVKAITKK----PVGVIYANSDFTPLTD--ADREAAERAK-FDNRWAFF 291
Query: 201 DPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFIGINHYTSTYVQDCIFSACKPGP 260
D ++ G+ + GST ++ LK LD+IG+N+YT V+ G
Sbjct: 292 DAVVRGQ-------LGGST--------RDDLKGRLDWIGVNYYTRQVVR-------ARGS 329
Query: 261 GASKTEGFCLQNSQKHGV-PLGEPTTLFWLNVYPQGMWKIIKYIKERYKNTPMFITENGY 319
G G+ + +GV P G P + F YP+G++ ++K +RY + P+ +TENG
Sbjct: 330 GYEIVPGYG-HGCEPNGVSPAGRPCSDFGWEFYPEGLYNVLKEYWDRY-HLPLLVTENGI 387
Query: 320 GEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADVRGYFVWSLLDSFEWTYGYTA 379
+ D +R Y+ S++ + A++DG +V GY WSL D++EW G++
Sbjct: 388 AD-----------EGDYQRPYYLVSHVYQVHRALQDGVNVIGYLHWSLADNYEWASGFSK 436
Query: 380 RFGLHHVDFATLKRTPKLSATWYKHFIAKHKLIKSQ 415
RFGL VD++T + + SA Y+ IAK + I +
Sbjct: 437 RFGLLMVDYSTKRLHWRPSAFIYRE-IAKSRAITDE 471
>pdb|3APG|A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|B Chain B, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|C Chain C, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|D Chain D, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
Length = 473
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 132/457 (28%), Positives = 192/457 (42%), Gaps = 109/457 (23%)
Query: 2 ESLGVNSYRFSISWARILPKGRF-----------GDV-----------------NSEGIN 33
E LG++ R I WARI PK F G++ N E +
Sbjct: 70 EKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALE 129
Query: 34 HYNKLIDALLLKGIQPFVTLTQFDSPQEIED-----KYG------AWLSPESQEDFGYFA 82
HY K+ +G + L + P I D K G WL ++ +F FA
Sbjct: 130 HYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFA 189
Query: 83 DICFKSFGDRVKYWFTINEPNM---QVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIA 139
D V W T+NEPN+ Q ++ R G PP + S F + A
Sbjct: 190 AFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGF-PPGYLS--FEAAEK---------A 237
Query: 140 AHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISSSTADKLAAERAQSFYMNWF 199
NLI +H A D + +K S+G+I W +P++ D++ R + +
Sbjct: 238 KFNLIQAHIGAYDAIKEYSEK----SVGVIYAFAWHDPLAEEYKDEVEEIRKKDY----- 288
Query: 200 LDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFIGINHYTSTYVQDCIFSACKPG 259
E + I+ S K LD+IG+N+Y S V P
Sbjct: 289 -----------EFVTILHS-------------KGKLDWIGVNYY-SRLVYGAKDGHLVPL 323
Query: 260 PGASKTEGFCLQNSQKHG-VPLGEPTTLFWLNVYPQGMWKIIKYIKERYKNTPMFITENG 318
PG GF S++ G G P + F +YP+G+ ++KY+ Y+ PM ITENG
Sbjct: 324 PGY----GFM---SERGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYE-LPMIITENG 375
Query: 319 YGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADVRGYFVWSLLDSFEWTYGYT 378
+ D R Y+ S+L A+ A+++GADVRGY WSL D++EW G+
Sbjct: 376 MADAA-----------DRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFR 424
Query: 379 ARFGLHHVDFATLKRTPKLSATWYKHFIAKHKLIKSQ 415
RFGL +VDF T KR + SA ++ IA K I +
Sbjct: 425 MRFGLVYVDFETKKRYLRPSALVFRE-IATQKEIPEE 460
>pdb|1UWI|A Chain A, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|B Chain B, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|C Chain C, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|D Chain D, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
Length = 489
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 179/402 (44%), Gaps = 62/402 (15%)
Query: 27 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKY----------GAWLSPESQE 76
N + +NHY ++ L +G+ + + P + D WLS +
Sbjct: 122 ANKDALNHYREIFKDLKSRGLYFIQNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTVY 181
Query: 77 DFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRL--GCHPPAHCSQPFGNCSQGNSEE 134
+F F+ F D V + T+NEPN+ L Y PP + S
Sbjct: 182 EFARFSAYTAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLSFELSRR------- 234
Query: 135 EPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISSSTADKLAAERAQSF 194
A +N+I +HA A D ++ +K +GII F+P++ D A E A++
Sbjct: 235 ----AMYNIIQAHARAYDGIKSVSKK----PVGIIYANSSFQPLTDK--DMEAVEMAEND 284
Query: 195 YMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFIGINHYTSTYVQDCIFS 254
WF D II G+ IV ++ LK LD+IG+N+YT T V+
Sbjct: 285 NRWWFFDAIIRGEITRGNEKIV-----------RDDLKGRLDWIGVNYYTRTVVK----- 328
Query: 255 ACKPGPGASKTEGFCLQNSQKHGVPL-GEPTTLFWLNVYPQGMWKIIKYIKERYKNTPMF 313
+ G G G+ +++ V L G PT+ F +P+G++ ++ RY + M+
Sbjct: 329 --RTGKGYVSLGGYG-HGCERNSVSLAGLPTSDFGWEFFPEGLYDVLTKYWNRY-HLYMY 384
Query: 314 ITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADVRGYFVWSLLDSFEW 373
+TENG + D +R Y+ S++ + A+ GADVRGY WSL D++EW
Sbjct: 385 VTENGIADDA-----------DYQRPYYLVSHVYQVHRAINSGADVRGYLHWSLADNYEW 433
Query: 374 TYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAKHKLIKSQ 415
G++ RFGL VD+ T + + S+ Y+ IA + I +
Sbjct: 434 ASGFSMRFGLLKVDYNTKRLYWRPSSLVYRE-IATNGAITDE 474
>pdb|4EAM|A Chain A, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAM|B Chain B, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAN|A Chain A, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
pdb|4EAN|B Chain B, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
Length = 489
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 193/453 (42%), Gaps = 88/453 (19%)
Query: 2 ESLGVNSYRFSISWARILPK-------------------------GRFGD-VNSEGINHY 35
+ +G+ R ++ W+RI P R + N + +NHY
Sbjct: 71 QKMGLKIARLNVEWSRIFPNPLPRPQNFDESKQDVTEVEINENELKRLDEYANKDALNHY 130
Query: 36 NKLIDALLLKGIQPFVTLTQFDSPQEIEDKY----------GAWLSPESQEDFGYFADIC 85
++ L +G+ + + + P + D WLS + +F F+
Sbjct: 131 REIFKDLKSRGLYFILNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTVYEFARFSAYI 190
Query: 86 FKSFGDRVKYWFTINEPNMQVTLSYRL--GCHPPAHCSQPFGNCSQGNSEEEPFIAAHNL 143
F D V + T+NEPN+ L Y PP + S A +N+
Sbjct: 191 AWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLSFELSRR-----------AMYNI 239
Query: 144 ILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISSSTADKLAAERAQSFYMNWFLDPI 203
I +HA A D ++ +K +GII F+P++ D A E A++ WF D I
Sbjct: 240 IQAHARAYDGIKSVSKK----PVGIIYANSSFQPLTDK--DMEAVEMAENDNRWWFFDAI 293
Query: 204 IYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFIGINHYTSTYVQDCIFSACKPGPGAS 263
I G+ IV ++ LK LD+IG+N+YT T V+ + G
Sbjct: 294 IRGEITRGNEKIV-----------RDDLKGRLDWIGVNYYTRTVVK-------RTEKGYV 335
Query: 264 KTEGFCLQNSQKHGVPL-GEPTTLFWLNVYPQGMWKIIKYIKERYKNTPMFITENGYGEI 322
G+ +++ V L G PT+ F +P+G++ ++ RY + M++TENG +
Sbjct: 336 SLGGYG-HGCERNSVSLAGLPTSDFGWEFFPEGLYDVLTKYWNRY-HLYMYVTENGIADD 393
Query: 323 CMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADVRGYFVWSLLDSFEWTYGYTARFG 382
D +R Y+ S++ + A+ GADVRGY WSL D++EW G++ RFG
Sbjct: 394 A-----------DYQRPYYLVSHVYQVHRAINSGADVRGYLHWSLADNYEWASGFSMRFG 442
Query: 383 LHHVDFATLKRTPKLSATWYKHFIAKHKLIKSQ 415
L VD+ T + + SA Y+ IA + I +
Sbjct: 443 LLKVDYNTKRLYWRPSALVYRE-IATNGAITDE 474
>pdb|1UWQ|A Chain A, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWQ|B Chain B, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWR|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWR|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWS|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWS|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWT|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWT|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWU|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|1UWU|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|2CEQ|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CEQ|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CER|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
pdb|2CER|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
Length = 489
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 193/453 (42%), Gaps = 88/453 (19%)
Query: 2 ESLGVNSYRFSISWARILPK-------------------------GRFGD-VNSEGINHY 35
+ +G+ R ++ W+RI P R + N + +NHY
Sbjct: 71 QKMGLKIARLNVEWSRIFPNPLPRPQNFDESKQDVTEVEINENELKRLDEYANKDALNHY 130
Query: 36 NKLIDALLLKGIQPFVTLTQFDSPQEIEDKY----------GAWLSPESQEDFGYFADIC 85
++ L +G+ + + + P + D WLS + +F F+
Sbjct: 131 REIFKDLKSRGLYFILNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTVYEFARFSAYI 190
Query: 86 FKSFGDRVKYWFTINEPNMQVTLSYRL--GCHPPAHCSQPFGNCSQGNSEEEPFIAAHNL 143
F D V + T+NEPN+ L Y PP + S A +N+
Sbjct: 191 AWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLSFELSRR-----------AMYNI 239
Query: 144 ILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISSSTADKLAAERAQSFYMNWFLDPI 203
I +HA A D ++ +K +GII F+P++ D A E A++ WF D I
Sbjct: 240 IQAHARAYDGIKSVSKK----PVGIIYANSSFQPLTDK--DMEAVEMAENDNRWWFFDAI 293
Query: 204 IYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFIGINHYTSTYVQDCIFSACKPGPGAS 263
I G+ IV ++ LK LD+IG+N+YT T V+ + G
Sbjct: 294 IRGEITRGNEKIV-----------RDDLKGRLDWIGVNYYTRTVVK-------RTEKGYV 335
Query: 264 KTEGFCLQNSQKHGVPL-GEPTTLFWLNVYPQGMWKIIKYIKERYKNTPMFITENGYGEI 322
G+ +++ V L G PT+ F +P+G++ ++ RY + M++TENG +
Sbjct: 336 SLGGYG-HGCERNSVSLAGLPTSDFGWEFFPEGLYDVLTKYWNRY-HLYMYVTENGIADD 393
Query: 323 CMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADVRGYFVWSLLDSFEWTYGYTARFG 382
D +R Y+ S++ + A+ GADVRGY WSL D++EW G++ RFG
Sbjct: 394 A-----------DYQRPYYLVSHVYQVHRAINSGADVRGYLHWSLADNYEWASGFSMRFG 442
Query: 383 LHHVDFATLKRTPKLSATWYKHFIAKHKLIKSQ 415
L VD+ T + + SA Y+ IA + I +
Sbjct: 443 LLKVDYNTKRLYWRPSALVYRE-IATNGAITDE 474
>pdb|1GOW|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus
pdb|1GOW|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus
Length = 489
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 178/402 (44%), Gaps = 62/402 (15%)
Query: 27 VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKY----------GAWLSPESQE 76
N + +NHY ++ L +G+ + + P + D WLS +
Sbjct: 122 ANKDALNHYREIFKDLKSRGLYFIQNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTVY 181
Query: 77 DFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRL--GCHPPAHCSQPFGNCSQGNSEE 134
+F F+ F D V + T+NEPN+ L Y PP + S
Sbjct: 182 EFARFSAYTAWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLSFELSRR------- 234
Query: 135 EPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISSSTADKLAAERAQSF 194
A +N+I +HA A D ++ +K +GII F+P++ D A E A++
Sbjct: 235 ----AMYNIIQAHARAYDGIKSVSKK----PVGIIYANSSFQPLTDK--DMEAVEMAEND 284
Query: 195 YMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFIGINHYTSTYVQDCIFS 254
WF D II G+ IV ++ LK LD+IG+N+YT T V+
Sbjct: 285 NRWWFFDAIIRGEITRGNEKIV-----------RDDLKGRLDWIGVNYYTRTVVK----- 328
Query: 255 ACKPGPGASKTEGFCLQNSQKHGVPL-GEPTTLFWLNVYPQGMWKIIKYIKERYKNTPMF 313
+ G G+ +++ V L G PT+ F +P+G++ ++ RY + M+
Sbjct: 329 --RTEKGYVSLGGYG-HGCERNSVSLAGLPTSDFGWEFFPEGLYDVLTKYWNRY-HLYMY 384
Query: 314 ITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADVRGYFVWSLLDSFEW 373
+TENG + D +R Y+ S++ + A+ GADVRGY WSL D++EW
Sbjct: 385 VTENGIADDA-----------DYQRPYYLVSHVYQVHRAINSGADVRGYLHWSLADNYEW 433
Query: 374 TYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAKHKLIKSQ 415
G++ RFGL VD+ T + + SA Y+ IA + I +
Sbjct: 434 ASGFSMRFGLLKVDYNTKRLYWRPSALVYRE-IATNGAITDE 474
>pdb|1QVB|A Chain A, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
pdb|1QVB|B Chain B, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
Length = 481
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 187/456 (41%), Gaps = 94/456 (20%)
Query: 2 ESLGVNSYRFSISWARILPKGRFG----------------DV------------NSEGIN 33
E LGVN+ R + W+RI PK F DV N E +N
Sbjct: 70 EKLGVNTIRVGVEWSRIFPKPTFNVKVPVERDENGSIVHVDVDDKAVERLDELANKEAVN 129
Query: 34 HYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKY-----------GAWLSPESQEDFGYFA 82
HY ++ + +G + + L + P + + WL+ ES +F +A
Sbjct: 130 HYVEMYKDWVERGRKLILNLYHWPLPLWLHNPIMVRRMGPDRAPSGWLNEESVVEFAKYA 189
Query: 83 DICFKSFGDRVKYWFTINEPNMQVTLSYRL--GCHPPAHCSQPFGNCSQGNSEEEPFIAA 140
G+ W T+NEPN+ Y G PP + S E A
Sbjct: 190 AYIAWKMGELPVMWSTMNEPNVVYEQGYMFVKGGFPPGYLSL-----------EAADKAR 238
Query: 141 HNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISSSTADKLAAERAQSFYMNWFL 200
N+I +HA A D + +K +G+I WFE + ++ +S + +F
Sbjct: 239 RNMIQAHARAYDNIKRFSKK----PVGLIYAFQWFELLEGPAE---VFDKFKSSKLYYFT 291
Query: 201 DPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFIGINHYTSTYVQDCIFSACKPGP 260
D + G + ++N+ + L LD++G+N+Y+ ++ P
Sbjct: 292 DIVSKG---SSIINV----------EYRRDLANRLDWLGVNYYSR-----LVYKIVDDKP 333
Query: 261 GASKTEGFCLQNSQKHGV-PLGEPTTLFWLNVYPQGMWKIIKYIKERYKNTPMFITENGY 319
GF G+ P P + F VYP+G++ ++K + RY + +TENG
Sbjct: 334 IILHGYGFLCTPG---GISPAENPCSDFGWEVYPEGLYLLLKELYNRY-GVDLIVTENGV 389
Query: 320 GEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADVRGYFVWSLLDSFEWTYGYTA 379
S + D L R Y+ S++ ++ A +G V+GY WSL D++EW G+
Sbjct: 390 -------SDSRDAL----RPAYLVSHVYSVWKAANEGIPVKGYLHWSLTDNYEWAQGFRQ 438
Query: 380 RFGLHHVDFATLKRTPKLSATWYKHFIAKHKLIKSQ 415
+FGL VDF T KR + SA ++ IA H I +
Sbjct: 439 KFGLVMVDFKTKKRYLRPSALVFRE-IATHNGIPDE 473
>pdb|1XEW|X Chain X, Structural Biochemistry Of Atp-Driven Dimerization And Dna
Stimulated Activation Of Smc Atpases.
pdb|1XEX|A Chain A, Structural Biochemistry Of Atp-Driven Dimerization And Dna
Stimulated Activation Of Smc Atpases
Length = 182
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 245 STYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQG 295
++ + D IF+ K P A E N++ G P+ E + VYP G
Sbjct: 60 ASRISDLIFAGSKNEPPAKYAEVAIYFNNEDRGFPIDEDEVVIRRRVYPDG 110
>pdb|3KTA|A Chain A, Structural Basis For Adenylate Kinase Activity In Abc
Atpases
pdb|3KTA|C Chain C, Structural Basis For Adenylate Kinase Activity In Abc
Atpases
Length = 182
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 245 STYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQG 295
++ + D IF+ K P A E N++ G P+ E + VYP G
Sbjct: 60 ASRISDLIFAGSKNEPPAKYAEVAIYFNNEDRGFPIDEDEVVIRRRVYPDG 110
>pdb|4I99|A Chain A, Crystal Structure Of The Smchead Bound To The C-winged
Helix Domain Of Scpa
pdb|4I99|B Chain B, Crystal Structure Of The Smchead Bound To The C-winged
Helix Domain Of Scpa
Length = 354
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 245 STYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQG 295
++ + D IF+ K P A E N++ G P+ E + VYP G
Sbjct: 60 ASRISDLIFAGSKNEPPAKYAEVAIYFNNEDRGFPIDEDEVVIRRRVYPDG 110
>pdb|3B40|A Chain A, Crystal Structure Of The Probable Dipeptidase Pvdm From
Pseudomonas Aeruginosa
Length = 417
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 31/133 (23%)
Query: 136 PFIAAHNLILSHATAVDIYRT------KYQKDQGGSIGIILNTLWFEPISSSTADKLAAE 189
P +A+H+ + VDI R + KD GG I ++ + P+S T DKL A
Sbjct: 229 PIVASHS---APRALVDIKRNLSDHEMQLIKDSGGVIQVVGFPAYLRPLSKPTLDKLDAL 285
Query: 190 RAQSFY-----MNWFL---DPII-------YGKYPAEMMNIVGSTLPK------FSSRDK 228
RA+ +++ L DPII +G+Y + + I+ PK + D
Sbjct: 286 RARFDLPPLEGLDYALMPGDPIITIWPEQRFGEYASALYGILEEE-PKAGLKELVDAIDY 344
Query: 229 EKLKQGLDFIGIN 241
K G+D +GI+
Sbjct: 345 TVKKVGIDHVGIS 357
>pdb|3PXG|A Chain A, Structure Of Meca121 And Clpc1-485 Complex
pdb|3PXG|B Chain B, Structure Of Meca121 And Clpc1-485 Complex
pdb|3PXG|C Chain C, Structure Of Meca121 And Clpc1-485 Complex
pdb|3PXG|D Chain D, Structure Of Meca121 And Clpc1-485 Complex
pdb|3PXG|E Chain E, Structure Of Meca121 And Clpc1-485 Complex
pdb|3PXG|F Chain F, Structure Of Meca121 And Clpc1-485 Complex
Length = 468
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 296 MWKIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLND 335
+ ++I+ + R KN P+ I E G G+ + + ++N+
Sbjct: 189 IQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINN 228
>pdb|3PXI|A Chain A, Structure Of Meca108:clpc
pdb|3PXI|B Chain B, Structure Of Meca108:clpc
pdb|3PXI|C Chain C, Structure Of Meca108:clpc
Length = 758
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 296 MWKIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLND 335
+ ++I+ + R KN P+ I E G G+ + + ++N+
Sbjct: 189 IQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINN 228
>pdb|2EOC|A Chain A, Solution Structure Of The Wgr Domain From Human Poly
[adp- Ribose] Polymerase-3
Length = 124
Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Query: 7 NSYRFSISWARILPKGRFGDVNSEGINHYNKLIDA 41
+S RF W R GR G+V INH+ +L DA
Sbjct: 57 DSNRFFTCWNRW---GRVGEVGQSKINHFTRLEDA 88
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,358,305
Number of Sequences: 62578
Number of extensions: 633067
Number of successful extensions: 1830
Number of sequences better than 100.0: 83
Number of HSP's better than 100.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1387
Number of HSP's gapped (non-prelim): 86
length of query: 426
length of database: 14,973,337
effective HSP length: 102
effective length of query: 324
effective length of database: 8,590,381
effective search space: 2783283444
effective search space used: 2783283444
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)