Query 014339
Match_columns 426
No_of_seqs 144 out of 1228
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 04:09:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014339.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014339hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0626 Beta-glucosidase, lact 100.0 4E-121 1E-125 923.0 37.6 409 1-412 100-512 (524)
2 PLN02998 beta-glucosidase 100.0 3E-113 6E-118 888.9 40.1 394 1-409 91-488 (497)
3 PLN02814 beta-glucosidase 100.0 9E-113 2E-117 886.8 41.5 401 1-415 86-489 (504)
4 PLN02849 beta-glucosidase 100.0 1E-112 2E-117 886.1 41.2 395 1-410 88-484 (503)
5 TIGR01233 lacG 6-phospho-beta- 100.0 6E-110 1E-114 861.5 40.5 390 1-412 62-467 (467)
6 PRK13511 6-phospho-beta-galact 100.0 1E-109 2E-114 861.5 40.5 392 1-411 63-468 (469)
7 PF00232 Glyco_hydro_1: Glycos 100.0 9E-110 2E-114 862.4 32.2 385 1-411 67-455 (455)
8 PRK09593 arb 6-phospho-beta-gl 100.0 2E-108 4E-113 852.1 41.6 382 1-411 82-475 (478)
9 COG2723 BglB Beta-glucosidase/ 100.0 5E-109 1E-113 830.5 35.3 382 1-410 68-454 (460)
10 PRK09589 celA 6-phospho-beta-g 100.0 3E-108 6E-113 850.1 42.1 382 1-411 76-474 (476)
11 PRK09852 cryptic 6-phospho-bet 100.0 3E-106 5E-111 833.6 42.1 382 1-411 80-471 (474)
12 PRK15014 6-phospho-beta-glucos 100.0 5E-106 1E-110 833.1 41.3 381 1-411 78-475 (477)
13 TIGR03356 BGL beta-galactosida 100.0 3E-103 7E-108 805.0 37.0 365 1-402 63-427 (427)
14 smart00633 Glyco_10 Glycosyl h 99.7 1.2E-15 2.7E-20 147.0 24.0 251 13-401 1-253 (254)
15 PF00150 Cellulase: Cellulase 99.3 1.5E-10 3.2E-15 112.1 16.4 101 1-105 30-134 (281)
16 COG3693 XynA Beta-1,4-xylanase 99.1 1.6E-08 3.4E-13 98.1 20.7 269 13-408 67-343 (345)
17 PF00331 Glyco_hydro_10: Glyco 99.1 3E-08 6.4E-13 98.9 22.8 267 11-404 42-318 (320)
18 PF07745 Glyco_hydro_53: Glyco 99.1 2.7E-08 5.9E-13 98.9 22.3 245 1-370 33-299 (332)
19 PF01229 Glyco_hydro_39: Glyco 99.0 1.1E-08 2.3E-13 107.8 17.5 283 2-405 50-359 (486)
20 PRK10150 beta-D-glucuronidase; 98.9 4.5E-07 9.7E-12 98.1 23.8 102 296-408 489-594 (604)
21 PF02449 Glyco_hydro_42: Beta- 98.6 4.8E-08 1E-12 99.5 7.3 99 1-104 19-140 (374)
22 PF11790 Glyco_hydro_cc: Glyco 98.0 0.00018 3.9E-09 68.9 14.9 66 295-372 152-217 (239)
23 COG3867 Arabinogalactan endo-1 97.7 0.012 2.6E-07 57.1 20.7 263 1-385 72-361 (403)
24 PF02836 Glyco_hydro_2_C: Glyc 97.2 0.0042 9E-08 61.2 12.5 99 295-407 185-294 (298)
25 COG2730 BglC Endoglucanase [Ca 96.6 0.0064 1.4E-07 62.8 7.7 104 1-104 82-193 (407)
26 PF14587 Glyco_hydr_30_2: O-Gl 96.2 0.014 3.1E-07 59.0 7.7 100 2-103 57-184 (384)
27 COG1874 LacA Beta-galactosidas 96.2 0.0069 1.5E-07 65.7 5.6 110 1-115 39-175 (673)
28 PF01373 Glyco_hydro_14: Glyco 95.7 0.006 1.3E-07 61.9 2.2 96 1-103 25-151 (402)
29 PF01301 Glyco_hydro_35: Glyco 95.1 0.015 3.3E-07 58.0 3.1 88 1-90 33-131 (319)
30 PLN02803 beta-amylase 95.0 0.041 8.9E-07 57.5 5.7 98 1-104 116-252 (548)
31 PLN02161 beta-amylase 94.5 0.089 1.9E-06 54.8 6.8 97 1-103 126-261 (531)
32 PLN00197 beta-amylase; Provisi 94.4 0.089 1.9E-06 55.2 6.5 97 1-103 136-271 (573)
33 PLN02801 beta-amylase 94.2 0.16 3.6E-06 52.9 8.0 98 1-103 46-182 (517)
34 PLN02705 beta-amylase 93.4 0.21 4.5E-06 53.1 7.0 98 1-103 277-413 (681)
35 PLN03059 beta-galactosidase; P 93.4 0.21 4.6E-06 55.4 7.5 99 1-103 68-178 (840)
36 PLN02905 beta-amylase 93.2 0.22 4.8E-06 53.0 7.0 88 1-92 295-421 (702)
37 PF12891 Glyco_hydro_44: Glyco 91.5 0.66 1.4E-05 44.1 7.2 115 33-171 24-181 (239)
38 COG5309 Exo-beta-1,3-glucanase 89.0 2.7 5.9E-05 40.6 9.0 80 298-387 219-304 (305)
39 PF03198 Glyco_hydro_72: Gluca 88.2 7.6 0.00016 38.5 11.8 81 1-101 62-144 (314)
40 PF13204 DUF4038: Protein of u 87.1 1.7 3.6E-05 42.8 6.7 72 26-102 81-156 (289)
41 PF00332 Glyco_hydro_17: Glyco 84.0 0.98 2.1E-05 44.9 3.4 76 307-398 225-307 (310)
42 COG3664 XynB Beta-xylosidase [ 79.4 2.5 5.5E-05 43.1 4.4 98 2-105 15-117 (428)
43 PRK10340 ebgA cryptic beta-D-g 76.1 6.7 0.00015 45.5 7.2 85 301-408 497-601 (1021)
44 cd04733 OYE_like_2_FMN Old yel 73.4 1E+02 0.0022 30.8 14.6 40 16-56 63-105 (338)
45 PF02055 Glyco_hydro_30: O-Gly 69.9 25 0.00054 37.4 9.2 99 299-407 319-421 (496)
46 PF12876 Cellulase-like: Sugar 69.0 19 0.0004 28.6 6.3 18 86-103 2-22 (88)
47 smart00642 Aamy Alpha-amylase 64.3 11 0.00025 33.7 4.6 53 1-53 28-90 (166)
48 KOG0496 Beta-galactosidase [Ca 63.4 19 0.00042 39.0 6.8 85 1-87 58-153 (649)
49 cd02932 OYE_YqiM_FMN Old yello 61.7 1.8E+02 0.0038 29.1 15.5 40 17-57 62-101 (336)
50 cd06543 GH18_PF-ChiA-like PF-C 47.9 57 0.0012 32.2 6.8 49 34-95 55-110 (294)
51 cd02803 OYE_like_FMN_family Ol 47.8 1.6E+02 0.0035 29.0 10.2 127 25-174 69-219 (327)
52 PF03511 Fanconi_A: Fanconi an 46.5 14 0.0003 27.5 1.7 38 16-56 19-56 (64)
53 PRK09525 lacZ beta-D-galactosi 46.2 58 0.0013 38.0 7.5 32 71-102 430-463 (1027)
54 PF13547 GTA_TIM: GTA TIM-barr 45.6 34 0.00074 33.5 4.7 41 310-350 207-264 (299)
55 TIGR00612 ispG_gcpE 1-hydroxy- 44.8 82 0.0018 31.7 7.3 53 33-85 108-160 (346)
56 COG2951 MltB Membrane-bound ly 43.9 51 0.0011 33.3 5.8 106 296-411 112-241 (343)
57 PRK10340 ebgA cryptic beta-D-g 42.7 71 0.0015 37.2 7.6 31 72-102 418-450 (1021)
58 cd06601 GH31_lyase_GLase GLase 42.6 59 0.0013 32.7 6.1 69 36-108 67-140 (332)
59 COG0821 gcpE 1-hydroxy-2-methy 39.8 1.1E+02 0.0024 30.8 7.3 64 17-86 100-163 (361)
60 PF14488 DUF4434: Domain of un 38.5 98 0.0021 27.8 6.3 59 1-63 29-93 (166)
61 PRK12858 tagatose 1,6-diphosph 38.2 1E+02 0.0022 31.2 7.0 93 2-100 116-210 (340)
62 PRK09432 metF 5,10-methylenete 37.5 1.4E+02 0.003 29.5 7.7 72 34-106 190-284 (296)
63 cd06602 GH31_MGAM_SI_GAA This 37.4 1.6E+02 0.0035 29.6 8.4 69 36-105 69-169 (339)
64 cd06603 GH31_GANC_GANAB_alpha 36.4 1.2E+02 0.0027 30.3 7.4 71 36-106 67-167 (339)
65 PF04646 DUF604: Protein of un 36.2 14 0.0003 35.6 0.4 72 42-116 76-148 (255)
66 PF02638 DUF187: Glycosyl hydr 36.0 4.4E+02 0.0096 26.1 13.0 60 31-90 68-154 (311)
67 cd06598 GH31_transferase_CtsZ 35.4 1.6E+02 0.0035 29.1 8.0 68 36-105 73-168 (317)
68 cd06545 GH18_3CO4_chitinase Th 35.4 99 0.0022 29.4 6.3 74 11-90 26-99 (253)
69 PRK09525 lacZ beta-D-galactosi 35.4 93 0.002 36.3 7.0 76 309-407 531-626 (1027)
70 cd06600 GH31_MGAM-like This fa 34.6 1.7E+02 0.0037 29.0 8.0 70 35-105 66-164 (317)
71 COG1501 Alpha-glucosidases, fa 34.1 1.5E+02 0.0032 33.5 8.1 100 3-108 293-422 (772)
72 PRK05799 coproporphyrinogen II 34.1 82 0.0018 31.9 5.8 98 1-114 105-204 (374)
73 PF13812 PPR_3: Pentatricopept 33.3 26 0.00056 21.5 1.3 14 36-49 21-34 (34)
74 cd02929 TMADH_HD_FMN Trimethyl 33.1 5.4E+02 0.012 26.1 14.2 130 25-177 75-231 (370)
75 PTZ00445 p36-lilke protein; Pr 31.8 68 0.0015 30.2 4.2 50 34-87 30-89 (219)
76 cd06542 GH18_EndoS-like Endo-b 31.2 1.6E+02 0.0034 27.9 6.9 60 32-95 50-110 (255)
77 PF11775 CobT_C: Cobalamin bio 30.9 1.4E+02 0.0031 28.1 6.2 67 290-364 116-185 (219)
78 TIGR00674 dapA dihydrodipicoli 30.6 2.7E+02 0.0058 27.0 8.5 62 24-99 13-74 (285)
79 PLN00196 alpha-amylase; Provis 30.5 60 0.0013 33.8 4.1 56 1-56 53-117 (428)
80 cd06591 GH31_xylosidase_XylS X 29.7 2.4E+02 0.0052 28.0 8.1 70 35-105 68-163 (319)
81 PLN02361 alpha-amylase 29.3 88 0.0019 32.4 5.0 53 1-53 38-96 (401)
82 cd06592 GH31_glucosidase_KIAA1 29.1 1.4E+02 0.0031 29.4 6.3 94 6-103 46-167 (303)
83 PF05089 NAGLU: Alpha-N-acetyl 28.9 1.4E+02 0.0029 30.2 6.0 66 35-102 97-184 (333)
84 cd00950 DHDPS Dihydrodipicolin 28.3 2.8E+02 0.0061 26.7 8.2 61 24-98 15-75 (284)
85 PF04914 DltD_C: DltD C-termin 28.1 2.2E+02 0.0048 24.5 6.5 54 35-92 38-91 (130)
86 cd06599 GH31_glycosidase_Aec37 28.0 2.7E+02 0.0058 27.6 8.1 68 36-104 76-171 (317)
87 PF09713 A_thal_3526: Plant pr 27.7 27 0.00058 25.4 0.6 36 36-82 16-52 (54)
88 cd06595 GH31_xylosidase_XylS-l 27.6 2.8E+02 0.006 27.1 8.0 70 35-105 76-163 (292)
89 PRK03170 dihydrodipicolinate s 27.4 3E+02 0.0064 26.7 8.2 61 24-98 16-76 (292)
90 PRK00366 ispG 4-hydroxy-3-meth 27.4 2E+02 0.0043 29.3 6.8 64 17-85 106-169 (360)
91 cd06525 GH25_Lyc-like Lyc mura 27.2 1.3E+02 0.0029 27.0 5.4 29 25-59 34-62 (184)
92 TIGR01589 A_thal_3526 uncharac 27.2 41 0.00088 24.8 1.5 36 36-82 19-55 (57)
93 cd07945 DRE_TIM_CMS Leptospira 26.5 1.3E+02 0.0029 29.3 5.5 74 3-87 85-158 (280)
94 PRK13398 3-deoxy-7-phosphohept 24.3 1.4E+02 0.003 29.1 5.1 60 1-64 50-109 (266)
95 PF04551 GcpE: GcpE protein; 24.3 1.3E+02 0.0029 30.5 5.0 52 33-85 118-169 (359)
96 PLN03153 hypothetical protein; 23.9 37 0.0008 36.1 1.1 19 40-58 325-344 (537)
97 PF09585 Lin0512_fam: Conserve 23.7 69 0.0015 27.0 2.5 31 312-355 2-32 (113)
98 PF05404 TRAP-delta: Transloco 22.9 71 0.0015 28.8 2.6 65 9-80 78-151 (167)
99 TIGR02058 lin0512_fam conserve 22.8 77 0.0017 26.8 2.6 30 312-354 2-31 (116)
100 PF11997 DUF3492: Domain of un 22.7 1.1E+02 0.0024 29.7 4.1 26 295-323 185-210 (268)
101 PRK13523 NADPH dehydrogenase N 22.5 7.9E+02 0.017 24.6 12.1 124 25-173 73-217 (337)
102 cd00408 DHDPS-like Dihydrodipi 22.4 4.7E+02 0.01 25.0 8.6 63 24-100 12-74 (281)
103 PRK13516 gamma-glutamyl:cystei 21.6 85 0.0018 32.1 3.2 83 2-91 174-266 (373)
104 PRK05402 glycogen branching en 21.2 2.9E+02 0.0063 30.9 7.5 57 34-90 316-397 (726)
105 PRK08255 salicylyl-CoA 5-hydro 20.7 1.2E+03 0.026 26.1 16.0 143 16-184 459-639 (765)
106 PF02057 Glyco_hydro_59: Glyco 20.3 1.8E+02 0.0039 32.1 5.4 64 37-103 116-184 (669)
No 1
>KOG0626 consensus Beta-glucosidase, lactase phlorizinhydrolase, and related proteins [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.4e-121 Score=923.03 Aligned_cols=409 Identities=52% Similarity=0.938 Sum_probs=372.7
Q ss_pred CcccCCCeEEeccccccccccCC-CCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHH
Q 014339 1 MESLGVNSYRFSISWARILPKGR-FGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFG 79 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~-~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~ 79 (426)
||+||+++||||||||||+|.|. .+.||++||+||++||++|+++||+|+|||||||+||+|+|+||||+|++++++|.
T Consensus 100 mk~lgv~afRFSIsWSRIlP~G~~~~gVN~~Gi~fY~~LI~eL~~nGI~P~VTLfHwDlPq~LeDeYgGwLn~~ivedF~ 179 (524)
T KOG0626|consen 100 MKELGVDAFRFSISWSRILPNGRLTGGVNEAGIQFYNNLIDELLANGIEPFVTLFHWDLPQALEDEYGGWLNPEIVEDFR 179 (524)
T ss_pred HHHcCCCeEEEEeehHhhCCCCCcCCCcCHHHHHHHHHHHHHHHHcCCeEEEEEecCCCCHHHHHHhccccCHHHHHHHH
Confidence 79999999999999999999996 47899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCceeEEEeccCchhhhhhccccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhc
Q 014339 80 YFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQ 159 (426)
Q Consensus 80 ~ya~~~~~~fg~~V~~w~t~NEP~~~~~~gy~~G~~pPg~~~~~~~~~~~~~~~~~~~~~~h~~l~Aha~a~~~~~~~~~ 159 (426)
+||++||++|||+||+|||||||++++..||..|..|||+|+...++|..++|+++.|.|+||||+|||+||++||++|+
T Consensus 180 ~yA~~CF~~fGDrVK~WiT~NEP~v~s~~gY~~G~~aPGrCs~~~~~c~~g~s~~epYiv~HNllLAHA~Av~~yr~kyk 259 (524)
T KOG0626|consen 180 DYADLCFQEFGDRVKHWITFNEPNVFSIGGYDTGTKAPGRCSKYVGNCSAGNSGTEPYIVAHNLLLAHAAAVDLYRKKYK 259 (524)
T ss_pred HHHHHHHHHhcccceeeEEecccceeeeehhccCCCCCCCCCcccccCCCCCCCCCcchHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred cCCCCcEEEEecCceeecCCCCHHHHHHHHHHHHHhccccccchhcCCCcHHHHHHHhhcCCCCChHHHHhhcCCCcEEE
Q 014339 160 KDQGGSIGIILNTLWFEPISSSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFIG 239 (426)
Q Consensus 160 ~~~~~~iGi~~~~~~~~p~~~~~~d~~aa~~~~~~~~~~~~d~~~~G~yp~~~~~~l~~~lp~~t~~d~~~lk~~~DfiG 239 (426)
..|+|+|||+++..|++|++++++|++||+|+.+|..+||++|++.|+||+.|++.+++|||.||+||++.+||+.||+|
T Consensus 260 ~~Q~G~IGi~~~~~w~eP~~~s~~D~~Aa~Ra~~F~~gw~l~p~~~GdYP~~Mk~~vg~rLP~FT~ee~~~lKGS~DFvG 339 (524)
T KOG0626|consen 260 KKQGGKIGIALSARWFEPYDDSKEDKEAAERALDFFLGWFLEPLTFGDYPDEMKERVGSRLPKFTEEESKLLKGSYDFVG 339 (524)
T ss_pred hhcCCeEeEEEeeeeeccCCCChHHHHHHHHHHHhhhhhhhcccccCCcHHHHHHHhcccCCCCCHHHHHHhcCchhhce
Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred cccCCcceeeccccCCCCCCCCCCCCCCcccccCccCC-CCCCCCCCCCCcccChHHHHHHHHHHHHHcCCCCEEEeecC
Q 014339 240 INHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHG-VPLGEPTTLFWLNVYPQGMWKIIKYIKERYKNTPMFITENG 318 (426)
Q Consensus 240 iNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~t~~~w~~i~P~gl~~~L~~~~~rY~~~PI~ITENG 318 (426)
||||++.+++....+..... .....+..... ..++ .+.+..+...|+.++|+||+++|++++++|+|+||||||||
T Consensus 340 iNyYts~~~~~~~~~~~~~~-~~~~~d~~~~~--~~~~~~~~~~~~~~~~~~v~P~Glr~~L~yiK~~Y~np~iyItENG 416 (524)
T KOG0626|consen 340 INYYTSRYVKHLKPPPDPSQ-PGWSTDSGVDW--TLEGNDLIGPKAGSDWLPVYPWGLRKLLNYIKDKYGNPPIYITENG 416 (524)
T ss_pred eehhhhhhhhccCCCCCCCC-cccccccceee--eecccccccccccccceeeccHHHHHHHHHHHhhcCCCcEEEEeCC
Confidence 99999999987543221110 11112221111 1222 34556667889999999999999999999999999999999
Q ss_pred CcCCCCCCCCCCCccCcHhHHHHHHHHHHHHHHHHH-cCCCEEEEEeecCCcccccCCCCcceeeeEEecCCC-Cccccc
Q 014339 319 YGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVR-DGADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFAT-LKRTPK 396 (426)
Q Consensus 319 ~~~~~~~~~~~~~~v~D~~Ri~yl~~~l~~v~~Ai~-dGv~V~GY~~WSl~Dn~EW~~Gy~~rfGL~~VD~~~-~~R~pK 396 (426)
+++......+....++|+.||+|++.||++|++||. |||+|+|||+|||||||||..||+.||||++|||++ ++|.||
T Consensus 417 ~~d~~~~~~~~~~~l~D~~Ri~Y~~~~L~~~~kAi~~dgvnv~GYf~WSLmDnfEw~~Gy~~RFGlyyVDf~d~l~R~pK 496 (524)
T KOG0626|consen 417 FDDLDGGTKSLEVALKDTKRIEYLQNHLQAVLKAIKEDGVNVKGYFVWSLLDNFEWLDGYKVRFGLYYVDFKDPLKRYPK 496 (524)
T ss_pred CCcccccccchhhhhcchHHHHHHHHHHHHHHHHHHhcCCceeeEEEeEcccchhhhcCcccccccEEEeCCCCCcCCch
Confidence 998754433334567899999999999999999997 999999999999999999999999999999999999 999999
Q ss_pred chHHHHHHHHHhCCCC
Q 014339 397 LSATWYKHFIAKHKLI 412 (426)
Q Consensus 397 ~S~~~y~~ii~~~~~~ 412 (426)
.|+.||+++++.+..+
T Consensus 497 ~Sa~wy~~fl~~~~~~ 512 (524)
T KOG0626|consen 497 LSAKWYKKFLKGKVKP 512 (524)
T ss_pred hHHHHHHHHHcCCCCC
Confidence 9999999999987665
No 2
>PLN02998 beta-glucosidase
Probab=100.00 E-value=3e-113 Score=888.93 Aligned_cols=394 Identities=45% Similarity=0.840 Sum_probs=348.1
Q ss_pred CcccCCCeEEeccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHHH
Q 014339 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGY 80 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~ 80 (426)
||+||+++|||||+||||+|+|. |.+|++||+||+++|++|+++||+|||||||||+|+||++++|||+|++++++|++
T Consensus 91 mk~lG~~~YRfSIsWsRI~P~G~-g~vN~~gl~~Y~~lid~L~~~GIeP~VTL~H~dlP~~L~~~yGGW~n~~~v~~F~~ 169 (497)
T PLN02998 91 MADMGLEAYRFSISWSRLLPSGR-GPINPKGLQYYNNLIDELITHGIQPHVTLHHFDLPQALEDEYGGWLSQEIVRDFTA 169 (497)
T ss_pred HHHcCCCeEEeeccHHhcCcCCC-CCcCHHHHHHHHHHHHHHHHcCCceEEEecCCCCCHHHHHhhCCcCCchHHHHHHH
Confidence 78999999999999999999986 89999999999999999999999999999999999999998999999999999999
Q ss_pred HHHHHHHHhCCceeEEEeccCchhhhhhccccCCCCCCCCCCCC-CCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhc
Q 014339 81 FADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPF-GNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQ 159 (426)
Q Consensus 81 ya~~~~~~fg~~V~~w~t~NEP~~~~~~gy~~G~~pPg~~~~~~-~~~~~~~~~~~~~~~~h~~l~Aha~a~~~~~~~~~ 159 (426)
||++||++|||+||+|+||||||+++..||..|.+|||.+.... ..|..+++.++.++|+||+++|||+||++||+.++
T Consensus 170 YA~~~~~~fgdrVk~WiT~NEP~~~~~~gy~~G~~~Pg~~~~~~~~~~~~~~~~~~~~~~~hn~llAHa~A~~~~~~~~~ 249 (497)
T PLN02998 170 YADTCFKEFGDRVSHWTTINEVNVFALGGYDQGITPPARCSPPFGLNCTKGNSSIEPYIAVHNMLLAHASATILYKQQYK 249 (497)
T ss_pred HHHHHHHHhcCcCCEEEEccCcchhhhcchhhcccCCCccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999644211 13655566678899999999999999999999877
Q ss_pred cCCCCcEEEEecCceeecCCCCHHHHHHHHHHHHHhccccccchhcCCCcHHHHHHHhhcCCCCChHHHHhhcCCCcEEE
Q 014339 160 KDQGGSIGIILNTLWFEPISSSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFIG 239 (426)
Q Consensus 160 ~~~~~~iGi~~~~~~~~p~~~~~~d~~aa~~~~~~~~~~~~d~~~~G~yp~~~~~~l~~~lp~~t~~d~~~lk~~~DfiG 239 (426)
..++++||++++..+++|++++++|++||++++++.++||+||++.|+||+.|++++++++|.|+++|++.+++++||||
T Consensus 250 ~~~~g~IGi~~~~~~~~P~~~~~~D~~aa~~~~~~~~~~f~dp~~~G~YP~~~~~~l~~~lp~~t~~d~~~i~~~~DFlG 329 (497)
T PLN02998 250 YKQHGSVGISVYTYGAVPLTNSVKDKQATARVNDFYIGWILHPLVFGDYPETMKTNVGSRLPAFTEEESEQVKGAFDFVG 329 (497)
T ss_pred cCCCCcEEEEEeCCeeecCCCCHHHHHHHHHHHHHHhhhhhhHHhCCCcCHHHHHHHhcCCCCCCHHHHHHhcCCCCEEE
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCcceeeccccCCCCCCCCCCCCCCcccccCccCCCCCCCCC-CCCCcccChHHHHHHHHHHHHHcCCCCEEEeecC
Q 014339 240 INHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPT-TLFWLNVYPQGMWKIIKYIKERYKNTPMFITENG 318 (426)
Q Consensus 240 iNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t-~~~w~~i~P~gl~~~L~~~~~rY~~~PI~ITENG 318 (426)
||||++.+|+....+. .+....+..+... .....+..+ .++| +++|+||+.+|++++++|+++||+|||||
T Consensus 330 iNyYts~~v~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~~~~w-~i~P~Gl~~~L~~~~~rY~~ppI~ITENG 401 (497)
T PLN02998 330 VINYMALYVKDNSSSL-KPNLQDFNTDIAV------EMTLVGNTSIENEY-ANTPWSLQQILLYVKETYGNPPVYILENG 401 (497)
T ss_pred EchhcCcccccCCCcC-CCCcccccccccc------ccccCCCcCCCCCC-EEChHHHHHHHHHHHHHcCCCCEEEeCCC
Confidence 9999999987532110 0000000000000 000112233 3667 89999999999999999987789999999
Q ss_pred CcCCCCCCCCCCCccCcHhHHHHHHHHHHHHHHHHHcCCCEEEEEeecCCcccccCCCCcceeeeEEecCCC--Cccccc
Q 014339 319 YGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFAT--LKRTPK 396 (426)
Q Consensus 319 ~~~~~~~~~~~~~~v~D~~Ri~yl~~~l~~v~~Ai~dGv~V~GY~~WSl~Dn~EW~~Gy~~rfGL~~VD~~~--~~R~pK 396 (426)
+++.+ ++.++|+.||+||++||++|++||+|||||+|||+|||||||||.+||++||||++||++| ++|+||
T Consensus 402 ~~~~~------~g~v~D~~Ri~Yl~~hl~~~~kAi~dGv~V~GY~~WSl~DnfEW~~Gy~~RfGLv~VD~~~~~~~R~pK 475 (497)
T PLN02998 402 QMTPH------SSSLVDTTRVKYLSSYIKAVLHSLRKGSDVKGYFQWSLMDVFELFGGYERSFGLLYVDFKDPSLKRSPK 475 (497)
T ss_pred CccCC------CCcccCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeccchhhhchhccccCccceEEECCCCCCcceecc
Confidence 98753 3678999999999999999999999999999999999999999999999999999999996 699999
Q ss_pred chHHHHHHHHHhC
Q 014339 397 LSATWYKHFIAKH 409 (426)
Q Consensus 397 ~S~~~y~~ii~~~ 409 (426)
+|++||+++|+++
T Consensus 476 ~S~~wy~~ii~~~ 488 (497)
T PLN02998 476 LSAHWYSSFLKGT 488 (497)
T ss_pred cHHHHHHHHHhcc
Confidence 9999999999976
No 3
>PLN02814 beta-glucosidase
Probab=100.00 E-value=8.8e-113 Score=886.75 Aligned_cols=401 Identities=42% Similarity=0.805 Sum_probs=353.7
Q ss_pred CcccCCCeEEeccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHHH
Q 014339 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGY 80 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~ 80 (426)
||+||+++|||||+||||+|+|. |.+|++||+||+++||+|+++||+|||||||||+|+||+++||||+|++++++|++
T Consensus 86 ~k~lG~~ayRfSIsWsRI~P~G~-g~~N~~Gl~fY~~lId~l~~~GI~P~VTL~H~dlP~~L~~~yGGW~n~~~i~~F~~ 164 (504)
T PLN02814 86 MAEMGLESFRFSISWSRLIPNGR-GLINPKGLLFYKNLIKELRSHGIEPHVTLYHYDLPQSLEDEYGGWINRKIIEDFTA 164 (504)
T ss_pred HHHcCCCEEEEeccHhhcCcCCC-CCCCHHHHHHHHHHHHHHHHcCCceEEEecCCCCCHHHHHhcCCcCChhHHHHHHH
Confidence 78999999999999999999986 89999999999999999999999999999999999999998999999999999999
Q ss_pred HHHHHHHHhCCceeEEEeccCchhhhhhccccCCCCCCCCCCC-CCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhc
Q 014339 81 FADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQP-FGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQ 159 (426)
Q Consensus 81 ya~~~~~~fg~~V~~w~t~NEP~~~~~~gy~~G~~pPg~~~~~-~~~~~~~~~~~~~~~~~h~~l~Aha~a~~~~~~~~~ 159 (426)
||+.||++|||+||+|+||||||+++..||..|.. ||.++.. ...|.++++.++.++++||+++|||+||++||++++
T Consensus 165 YA~~~f~~fgdrVk~WiT~NEP~~~~~~gy~~G~~-pg~~~~~~~~~~~~~~~~~~~~~a~hn~llAHa~Av~~~~~~~~ 243 (504)
T PLN02814 165 FADVCFREFGEDVKLWTTINEATIFAIGSYGQGIR-YGHCSPNKFINCSTGNSCTETYIAGHNMLLAHASASNLYKLKYK 243 (504)
T ss_pred HHHHHHHHhCCcCCEEEeccccchhhhcccccCcC-CCCCCcccccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999985 8865421 124544555578899999999999999999999887
Q ss_pred cCCCCcEEEEecCceeecCCCCHHHHHHHHHHHHHhccccccchhcCCCcHHHHHHHhhcCCCCChHHHHhhcCCCcEEE
Q 014339 160 KDQGGSIGIILNTLWFEPISSSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFIG 239 (426)
Q Consensus 160 ~~~~~~iGi~~~~~~~~p~~~~~~d~~aa~~~~~~~~~~~~d~~~~G~yp~~~~~~l~~~lp~~t~~d~~~lk~~~DfiG 239 (426)
..|+++||++++..+++|++++++|++||++++++.++||+||++.|+||+.|+++++.++|.|+++|++.+++++||||
T Consensus 244 ~~~~g~IGi~~~~~~~~P~~~~~~D~~Aa~~~~~~~~~~f~dp~~~G~YP~~~~~~l~~~lp~~~~~d~~~ikg~~DFiG 323 (504)
T PLN02814 244 SKQRGSIGLSIFAFGLSPYTNSKDDEIATQRAKAFLYGWMLKPLVFGDYPDEMKRTLGSRLPVFSEEESEQVKGSSDFVG 323 (504)
T ss_pred cCCCCeEEEEEeCceeecCCCCHHHHHHHHHHHHHhhhhhhHHHhCCCccHHHHHHHhcCCCCCCHHHHHHhcCCCCEEE
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCcceeeccccCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCcccChHHHHHHHHHHHHHcCCCCEEEeecCC
Q 014339 240 INHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKIIKYIKERYKNTPMFITENGY 319 (426)
Q Consensus 240 iNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~w~~i~P~gl~~~L~~~~~rY~~~PI~ITENG~ 319 (426)
||||++.+|+....+...+ ... .+..... .....+..+.+++|| +|+|+||+.+|++++++|+++||+|||||+
T Consensus 324 iNyYt~~~v~~~~~~~~~~-~~~---~~~~~~~-~~~~~~~~~~~~~gW-ei~P~Gl~~~L~~~~~rY~~ppI~ITENG~ 397 (504)
T PLN02814 324 IIHYTTFYVTNRPAPSIFP-SMN---EGFFTDM-GAYIISAGNSSFFEF-DATPWGLEGILEHIKQSYNNPPIYILENGM 397 (504)
T ss_pred EcccccceeccCCCCCccc-ccC---CCccccc-ccccCCCCCcCCCCC-eECcHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 9999999886432110000 000 0000000 000112346778999 899999999999999999877999999999
Q ss_pred cCCCCCCCCCCCccCcHhHHHHHHHHHHHHHHHHHcCCCEEEEEeecCCcccccCCCCcceeeeEEecCCC--Ccccccc
Q 014339 320 GEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFAT--LKRTPKL 397 (426)
Q Consensus 320 ~~~~~~~~~~~~~v~D~~Ri~yl~~~l~~v~~Ai~dGv~V~GY~~WSl~Dn~EW~~Gy~~rfGL~~VD~~~--~~R~pK~ 397 (426)
+..+ ++.++|+.||+||++||++|++||+|||||+||++|||||||||.+||++||||+|||++| ++|+||+
T Consensus 398 ~~~~------~g~i~D~~Ri~Yl~~hl~~l~~Ai~dGv~V~GY~~WSllDnfEW~~Gy~~RfGLvyVD~~~~~~~R~pK~ 471 (504)
T PLN02814 398 PMKH------DSTLQDTPRVEFIQAYIGAVLNAIKNGSDTRGYFVWSMIDLYELLGGYTTSFGMYYVNFSDPGRKRSPKL 471 (504)
T ss_pred CCCC------CCcccCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeccchhhhchhccccCccceEEECCCCCCcceeeec
Confidence 8753 4678999999999999999999999999999999999999999999999999999999996 5999999
Q ss_pred hHHHHHHHHHhCCCCCCC
Q 014339 398 SATWYKHFIAKHKLIKSQ 415 (426)
Q Consensus 398 S~~~y~~ii~~~~~~~~~ 415 (426)
|++||+++|+++..+++.
T Consensus 472 S~~wy~~~i~~~~~~~~~ 489 (504)
T PLN02814 472 SASWYTGFLNGTIDVASQ 489 (504)
T ss_pred HHHHHHHHHhcCCChhcc
Confidence 999999999988777644
No 4
>PLN02849 beta-glucosidase
Probab=100.00 E-value=1e-112 Score=886.10 Aligned_cols=395 Identities=43% Similarity=0.846 Sum_probs=350.7
Q ss_pred CcccCCCeEEeccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHHH
Q 014339 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGY 80 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~ 80 (426)
||+||+++|||||+||||+|+|. |.+|++||+||+++|++|+++||+|||||+|||+|+||++++|||+|++++++|++
T Consensus 88 m~~lG~~aYRfSIsWsRI~P~G~-g~vN~~gl~fY~~lid~l~~~GI~P~VTL~H~dlP~~L~~~yGGW~nr~~v~~F~~ 166 (503)
T PLN02849 88 MVETGLDAFRFSISWSRLIPNGR-GSVNPKGLQFYKNFIQELVKHGIEPHVTLFHYDHPQYLEDDYGGWINRRIIKDFTA 166 (503)
T ss_pred HHHcCCCeEEEeccHHhcCcCCC-CCCCHHHHHHHHHHHHHHHHcCCeEEEeecCCCCcHHHHHhcCCcCCchHHHHHHH
Confidence 78999999999999999999986 89999999999999999999999999999999999999998999999999999999
Q ss_pred HHHHHHHHhCCceeEEEeccCchhhhhhccccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhcc
Q 014339 81 FADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQK 160 (426)
Q Consensus 81 ya~~~~~~fg~~V~~w~t~NEP~~~~~~gy~~G~~pPg~~~~~~~~~~~~~~~~~~~~~~h~~l~Aha~a~~~~~~~~~~ 160 (426)
||+.||++|||+||+|+||||||+++..||..|.+|||.+......|..+++..+.++++||+++|||+||+++|++++.
T Consensus 167 YA~~~f~~fgDrVk~WiT~NEP~~~~~~gy~~G~~~Pg~~~~~~~~~~~~~~~~~~~~a~hn~llAHa~A~~~~~~~~~~ 246 (503)
T PLN02849 167 YADVCFREFGNHVKFWTTINEANIFTIGGYNDGITPPGRCSSPGRNCSSGNSSTEPYIVGHNLLLAHASVSRLYKQKYKD 246 (503)
T ss_pred HHHHHHHHhcCcCCEEEEecchhhhhhchhhhccCCCCccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999643111234444445678999999999999999999997655
Q ss_pred CCCCcEEEEecCceeecCCCCHHHHHHHHHHHHHhccccccchhcCCCcHHHHHHHhhcCCCCChHHHHhhcCCCcEEEc
Q 014339 161 DQGGSIGIILNTLWFEPISSSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFIGI 240 (426)
Q Consensus 161 ~~~~~iGi~~~~~~~~p~~~~~~d~~aa~~~~~~~~~~~~d~~~~G~yp~~~~~~l~~~lp~~t~~d~~~lk~~~DfiGi 240 (426)
.|+++||++++..+++|++++++|++||++++++.++||+||++.|+||+.|++.+++++|.|+++|++.+++++|||||
T Consensus 247 ~~~~~IGi~~~~~~~~P~~~~~~D~~AA~~~~~~~~~~f~dp~~~G~YP~~~~~~l~~~lp~~~~~d~~~i~~~~DFlGi 326 (503)
T PLN02849 247 MQGGSIGFSLFALGFTPSTSSKDDDIATQRAKDFYLGWMLEPLIFGDYPDEMKRTIGSRLPVFSKEESEQVKGSSDFIGV 326 (503)
T ss_pred CCCCEEEEEEECceeecCCCCHHHHHHHHHHHHHhhhhhhHHHhCCCccHHHHHHHhcCCCCCCHHHHHHhcCCCCEEEE
Confidence 68899999999999999999999999999999999999999999999999999999989999999999999999999999
Q ss_pred ccCCcceeeccccCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCcccChHHHHHHHHHHHHHcCCCCEEEeecCCc
Q 014339 241 NHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKIIKYIKERYKNTPMFITENGYG 320 (426)
Q Consensus 241 NyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~w~~i~P~gl~~~L~~~~~rY~~~PI~ITENG~~ 320 (426)
|||++.+|+.........+.. . ... ..+.+....+++|| +|+|+||+.+|++++++|+++||+|||||++
T Consensus 327 NyYt~~~v~~~~~~~~~~~~~-----~--~~~--~~~~~~~~~~~~gw-~i~P~Gl~~~L~~~~~rY~~pPi~ITENG~~ 396 (503)
T PLN02849 327 IHYLAASVTNIKIKPSLSGNP-----D--FYS--DMGVSLGKFSAFEY-AVAPWAMESVLEYIKQSYGNPPVYILENGTP 396 (503)
T ss_pred eccchhhcccCCCCCCCCCCC-----c--ccc--ccCCCCCccCCCCC-eEChHHHHHHHHHHHHhcCCCCEEEeCCCCC
Confidence 999999886532110000000 0 000 00112234567899 8999999999999999998779999999999
Q ss_pred CCCCCCCCCCCccCcHhHHHHHHHHHHHHHHHHHcCCCEEEEEeecCCcccccCCCCcceeeeEEecCCC--Ccccccch
Q 014339 321 EICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFAT--LKRTPKLS 398 (426)
Q Consensus 321 ~~~~~~~~~~~~v~D~~Ri~yl~~~l~~v~~Ai~dGv~V~GY~~WSl~Dn~EW~~Gy~~rfGL~~VD~~~--~~R~pK~S 398 (426)
..+. .++.++|+.||+||++||++|++||+|||||+||++|||||||||.+||++||||++||++| ++|+||+|
T Consensus 397 ~~d~----~~~~v~D~~Ri~Yl~~hL~~l~~Ai~dGv~V~GY~~WSl~DnfEW~~Gy~~RfGLi~VD~~~~~~~R~pK~S 472 (503)
T PLN02849 397 MKQD----LQLQQKDTPRIEYLHAYIGAVLKAVRNGSDTRGYFVWSFMDLYELLKGYEFSFGLYSVNFSDPHRKRSPKLS 472 (503)
T ss_pred ccCC----CCCcccCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeccchhhhchhccccCccceEEECCCCCCcceecccH
Confidence 7653 24578999999999999999999999999999999999999999999999999999999997 59999999
Q ss_pred HHHHHHHHHhCC
Q 014339 399 ATWYKHFIAKHK 410 (426)
Q Consensus 399 ~~~y~~ii~~~~ 410 (426)
++||+++|++++
T Consensus 473 ~~wy~~ii~~~~ 484 (503)
T PLN02849 473 AHWYSAFLKGNS 484 (503)
T ss_pred HHHHHHHHHhCC
Confidence 999999999886
No 5
>TIGR01233 lacG 6-phospho-beta-galactosidase. This enzyme is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation.
Probab=100.00 E-value=6.2e-110 Score=861.46 Aligned_cols=390 Identities=35% Similarity=0.602 Sum_probs=340.1
Q ss_pred CcccCCCeEEeccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHHH
Q 014339 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGY 80 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~ 80 (426)
||+||+++||||||||||+|+|. |.+|++||+||++||++|+++||+|||||+|||+|+||+++ |||+|++++++|++
T Consensus 62 ~~~lG~~~yRfSIsWsRI~P~g~-~~~N~~gl~~Y~~lid~l~~~GI~P~VTL~H~dlP~~L~~~-GGW~n~~~v~~F~~ 139 (467)
T TIGR01233 62 AEEYGVNGIRISIAWSRIFPTGY-GEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEALHSN-GDFLNRENIEHFID 139 (467)
T ss_pred HHHcCCCEEEEecchhhccCCCC-CCcCHHHHHHHHHHHHHHHHcCCEEEEeccCCCCcHHHHHc-CCCCCHHHHHHHHH
Confidence 68999999999999999999986 89999999999999999999999999999999999999987 99999999999999
Q ss_pred HHHHHHHHhCCceeEEEeccCchhhhhhccccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhcc
Q 014339 81 FADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQK 160 (426)
Q Consensus 81 ya~~~~~~fg~~V~~w~t~NEP~~~~~~gy~~G~~pPg~~~~~~~~~~~~~~~~~~~~~~h~~l~Aha~a~~~~~~~~~~ 160 (426)
||+.||++||+ ||+|+||||||+++..||+.|.+|||.+. ...+.++++||+++|||+||++||++
T Consensus 140 YA~~~f~~fgd-Vk~WiT~NEP~~~~~~gy~~G~~~Pg~~~----------~~~~~~~a~hn~l~AHa~A~~~~~~~--- 205 (467)
T TIGR01233 140 YAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPPGIKY----------DLAKVFQSHHNMMVSHARAVKLYKDK--- 205 (467)
T ss_pred HHHHHHHHhCC-CCEEEEecchhhhhhccchhcccCCCccc----------hhHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 99999999998 99999999999999999999999999642 13478999999999999999999985
Q ss_pred CCCCcEEEEecCceeecCC-CCHHHHHHHHHHHHHhccccccchhcCCCcHHHHHHHhhc------CCCCChHHHHhh--
Q 014339 161 DQGGSIGIILNTLWFEPIS-SSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGST------LPKFSSRDKEKL-- 231 (426)
Q Consensus 161 ~~~~~iGi~~~~~~~~p~~-~~~~d~~aa~~~~~~~~~~~~d~~~~G~yp~~~~~~l~~~------lp~~t~~d~~~l-- 231 (426)
.++++|||+++..+++|++ ++++|++||++++++.++||+||++.|+||+.|++.++.+ +|.|+++|++.+
T Consensus 206 ~~~~~IGi~~~~~~~~P~~~~~~~D~~aA~~~~~~~~~~f~d~~~~G~Yp~~~~~~~~~~~~~~~~~~~~~~~d~~~i~~ 285 (467)
T TIGR01233 206 GYKGEIGVVHALPTKYPYDPENPADVRAAELEDIIHNKFILDATYLGHYSDKTMEGVNHILAENGGELDLRDEDFQALDA 285 (467)
T ss_pred CCCCeEEEEecCceeEECCCCCHHHHHHHHHHHHHhhhcccchhhCCCCCHHHHHHHHhhhhccCCCCCCCHHHHHHHhc
Confidence 7889999999999999998 8999999999999999999999999999999999988632 367999999988
Q ss_pred -cCCCcEEEcccCCcceeeccccCCC----CCCCCCCCCCCcccccCccCCCC-CCCCCCCCCcccChHHHHHHHHHHHH
Q 014339 232 -KQGLDFIGINHYTSTYVQDCIFSAC----KPGPGASKTEGFCLQNSQKHGVP-LGEPTTLFWLNVYPQGMWKIIKYIKE 305 (426)
Q Consensus 232 -k~~~DfiGiNyY~~~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~t~~~w~~i~P~gl~~~L~~~~~ 305 (426)
++++||||||||++.+|+....... ..+.......... .......+ ..+.+++|| +|+|+||+.+|+++++
T Consensus 286 ~~~~~DFlGinyYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~t~~gw-~i~P~Gl~~~L~~~~~ 362 (467)
T TIGR01233 286 AKDLNDFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIK--GVGRRVAPDYVPRTDWDW-IIYPEGLYDQIMRVKN 362 (467)
T ss_pred cCCCCCEEEEccccceeeccCCCccccccCCccccCcccccCC--CcccccCCCCCCcCCCCC-eeChHHHHHHHHHHHH
Confidence 5899999999999999875211100 0000000000000 00000112 225678999 8999999999999999
Q ss_pred HcCC-CCEEEeecCCcCCCCCCCCCCCccCcHhHHHHHHHHHHHHHHHHHcCCCEEEEEeecCCcccccCCCCcceeeeE
Q 014339 306 RYKN-TPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADVRGYFVWSLLDSFEWTYGYTARFGLH 384 (426)
Q Consensus 306 rY~~-~PI~ITENG~~~~~~~~~~~~~~v~D~~Ri~yl~~~l~~v~~Ai~dGv~V~GY~~WSl~Dn~EW~~Gy~~rfGL~ 384 (426)
+|++ +||+|||||++..+... ++.++|+.||+||++||++|++||+|||+|+||++|||||||||.+||++||||+
T Consensus 363 ~Y~~~ppi~ItENG~~~~d~~~---~g~i~D~~Ri~Yl~~hl~~~~~Ai~dGv~v~GY~~WSl~Dn~Ew~~Gy~~RfGLv 439 (467)
T TIGR01233 363 DYPNYKKIYITENGLGYKDEFV---DNTVYDDGRIDYVKQHLEVLSDAIADGANVKGYFIWSLMDVFSWSNGYEKRYGLF 439 (467)
T ss_pred HcCCCCCEEEeCCCCCCCCCCC---CCccCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeccchhhhchhccccCccceE
Confidence 9985 57999999999865431 4679999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCcccccchHHHHHHHHHhCCCC
Q 014339 385 HVDFATLKRTPKLSATWYKHFIAKHKLI 412 (426)
Q Consensus 385 ~VD~~~~~R~pK~S~~~y~~ii~~~~~~ 412 (426)
+||++|++|+||+|++||+++|+++.++
T Consensus 440 ~VD~~t~~R~~K~S~~wy~~ii~~~~~~ 467 (467)
T TIGR01233 440 YVDFDTQERYPKKSAHWYKKLAETQVIE 467 (467)
T ss_pred EECCCCCccccccHHHHHHHHHHhcCCC
Confidence 9999999999999999999999998653
No 6
>PRK13511 6-phospho-beta-galactosidase; Provisional
Probab=100.00 E-value=1.1e-109 Score=861.48 Aligned_cols=392 Identities=34% Similarity=0.606 Sum_probs=339.5
Q ss_pred CcccCCCeEEeccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHHH
Q 014339 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGY 80 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~ 80 (426)
||+||+++|||||+||||+|+|. |.+|++||+||++||++|+++||+|||||||||+|+||+++ |||+|++++++|++
T Consensus 63 ~~~lG~~~yRfSIsWsRI~P~G~-g~vN~~gl~~Y~~lid~l~~~GI~P~VTL~H~dlP~~L~~~-GGW~n~~~v~~F~~ 140 (469)
T PRK13511 63 AEEFGVNGIRISIAWSRIFPDGY-GEVNPKGVEYYHRLFAECHKRHVEPFVTLHHFDTPEALHSN-GDWLNRENIDHFVR 140 (469)
T ss_pred HHHhCCCEEEeeccHhhcCcCCC-CCcCHHHHHHHHHHHHHHHHcCCEEEEEecCCCCcHHHHHc-CCCCCHHHHHHHHH
Confidence 78999999999999999999987 89999999999999999999999999999999999999976 99999999999999
Q ss_pred HHHHHHHHhCCceeEEEeccCchhhhhhccccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhcc
Q 014339 81 FADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQK 160 (426)
Q Consensus 81 ya~~~~~~fg~~V~~w~t~NEP~~~~~~gy~~G~~pPg~~~~~~~~~~~~~~~~~~~~~~h~~l~Aha~a~~~~~~~~~~ 160 (426)
||+.||++||| ||+|+||||||+++..||..|.+|||.+. +..+.++++||+++|||+||++||+.
T Consensus 141 YA~~~~~~fgd-Vk~W~T~NEP~~~~~~gy~~G~~~Pg~~~----------~~~~~~~~~hn~llAHa~A~~~~~~~--- 206 (469)
T PRK13511 141 YAEFCFEEFPE-VKYWTTFNEIGPIGDGQYLVGKFPPGIKY----------DLAKVFQSHHNMMVAHARAVKLFKDK--- 206 (469)
T ss_pred HHHHHHHHhCC-CCEEEEccchhhhhhcchhhcccCCCCCc----------cHHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 99999999999 99999999999999999999999999753 12478999999999999999999985
Q ss_pred CCCCcEEEEecCceeecCC-CCHHHHHHHHHHHHHhccccccchhcCCCcHHHHHHHhh------cCCCCChHHHHhhcC
Q 014339 161 DQGGSIGIILNTLWFEPIS-SSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGS------TLPKFSSRDKEKLKQ 233 (426)
Q Consensus 161 ~~~~~iGi~~~~~~~~p~~-~~~~d~~aa~~~~~~~~~~~~d~~~~G~yp~~~~~~l~~------~lp~~t~~d~~~lk~ 233 (426)
.++++||++++..+++|++ ++++|++||++++++.++||+||++.|+||+.|++.++. ..+.|+++|++.+++
T Consensus 207 ~~~g~IGi~~~~~~~~P~~~~~~~d~~aa~~~~~~~~~~f~dp~~~G~Yp~~~~~~~~~~~~~~~~~l~~t~~d~~~ik~ 286 (469)
T PRK13511 207 GYKGEIGVVHALPTKYPIDPDNPEDVRAAELEDIIHNKFILDATYLGYYSEETMEGVNHILEANGGSLDIRDEDFEILKA 286 (469)
T ss_pred CCCCeEEEEecCceEeeCCCCCHHHHHHHHHHHHHhhhcccchhhCCCCCHHHHHHHHHhhhhcCCCCCCCHHHHHHHhc
Confidence 6889999999999999999 999999999999999999999999999999999998752 124799999999864
Q ss_pred ---CCcEEEcccCCcceeeccccCCCC-CCCCCCCCCCccccc--CccCCCCCCCCCCCCCcccChHHHHHHHHHHHHHc
Q 014339 234 ---GLDFIGINHYTSTYVQDCIFSACK-PGPGASKTEGFCLQN--SQKHGVPLGEPTTLFWLNVYPQGMWKIIKYIKERY 307 (426)
Q Consensus 234 ---~~DfiGiNyY~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~t~~~w~~i~P~gl~~~L~~~~~rY 307 (426)
++||||||||++.+|+........ ............... ......+..+.++++| +|+|+||+.+|++++++|
T Consensus 287 ~~~~~DFiGiNyYt~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gw-~i~P~Gl~~~l~~~~~~Y 365 (469)
T PRK13511 287 AKDLNDFLGINYYMSDWMRAYDGETEIIHNGTGEKGSSKYQLKGVGERVKPPDVPTTDWDW-IIYPQGLYDQLMRIKKDY 365 (469)
T ss_pred CCCCCCEEEechhhcceeecCCCccccccCCCCccccccccccCccccccCCCCCcCCCCC-eECcHHHHHHHHHHHHHc
Confidence 689999999999998753211000 000000000000000 0000112335678999 899999999999999999
Q ss_pred CC-CCEEEeecCCcCCCCCCCCCCCccCcHhHHHHHHHHHHHHHHHHHcCCCEEEEEeecCCcccccCCCCcceeeeEEe
Q 014339 308 KN-TPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADVRGYFVWSLLDSFEWTYGYTARFGLHHV 386 (426)
Q Consensus 308 ~~-~PI~ITENG~~~~~~~~~~~~~~v~D~~Ri~yl~~~l~~v~~Ai~dGv~V~GY~~WSl~Dn~EW~~Gy~~rfGL~~V 386 (426)
++ +||||||||++..+.. +.++.++|+.||+||++||++|++||+|||||+|||+|||||||||.+||++||||++|
T Consensus 366 ~~~~pi~ITENG~~~~d~~--~~~~~~~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~WSl~DnfEW~~Gy~~RfGl~~V 443 (469)
T PRK13511 366 PNYKKIYITENGLGYKDEF--VDGKTVDDDKRIDYVKQHLEVISDAISDGANVKGYFIWSLMDVFSWSNGYEKRYGLFYV 443 (469)
T ss_pred CCCCCEEEecCCcCCCCCc--CCCCccCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecccccccchhcCccCccceEEE
Confidence 86 6899999999976542 22457999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcccccchHHHHHHHHHhCCC
Q 014339 387 DFATLKRTPKLSATWYKHFIAKHKL 411 (426)
Q Consensus 387 D~~~~~R~pK~S~~~y~~ii~~~~~ 411 (426)
|++|++|+||+|++||+++|+++++
T Consensus 444 D~~~~~R~pK~S~~wy~~~i~~~~~ 468 (469)
T PRK13511 444 DFETQERYPKKSAYWYKKLAETKVI 468 (469)
T ss_pred CCCcCccccccHHHHHHHHHHhCCC
Confidence 9999999999999999999999875
No 7
>PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 1 GH1 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3.2.1.21 from EC); beta-galactosidase (3.2.1.23 from EC); 6-phospho-beta-galactosidase (3.2.1.85 from EC); 6-phospho-beta-glucosidase (3.2.1.86 from EC); lactase-phlorizin hydrolase (3.2.1.62 from EC), (3.2.1.108 from EC); beta-mannosidase (3.2.1.25 from EC); myrosinase (3.2.1.147 from EC). ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1QVB_A 3AHY_D 2E9L_A 2ZOX_A 2JFE_X 2E9M_A 3FIZ_A 3FIY_A 3CMJ_A 3FJ0_A ....
Probab=100.00 E-value=8.6e-110 Score=862.43 Aligned_cols=385 Identities=48% Similarity=0.850 Sum_probs=334.2
Q ss_pred CcccCCCeEEeccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHHH
Q 014339 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGY 80 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~ 80 (426)
||+||+++|||||+|+||+|+|..|.+|++|++||+++|++|+++||+|||||||||+|+||++ +|||+|+++++.|++
T Consensus 67 ~~~lg~~~yRfsi~W~Ri~P~g~~g~~n~~~~~~Y~~~i~~l~~~gi~P~vtL~H~~~P~~l~~-~ggw~~~~~~~~F~~ 145 (455)
T PF00232_consen 67 MKELGVNAYRFSISWSRIFPDGFEGKVNEEGLDFYRDLIDELLENGIEPIVTLYHFDLPLWLED-YGGWLNRETVDWFAR 145 (455)
T ss_dssp HHHHT-SEEEEE--HHHHSTTSSSSSS-HHHHHHHHHHHHHHHHTT-EEEEEEESS--BHHHHH-HTGGGSTHHHHHHHH
T ss_pred HHhhccceeeeecchhheeecccccccCHhHhhhhHHHHHHHHhhccceeeeeeecccccceee-cccccCHHHHHHHHH
Confidence 6899999999999999999998449999999999999999999999999999999999999998 699999999999999
Q ss_pred HHHHHHHHhCCceeEEEeccCchhhhhhccccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhcc
Q 014339 81 FADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQK 160 (426)
Q Consensus 81 ya~~~~~~fg~~V~~w~t~NEP~~~~~~gy~~G~~pPg~~~~~~~~~~~~~~~~~~~~~~h~~l~Aha~a~~~~~~~~~~ 160 (426)
||++|+++|||+|++|+|||||++++..||+.|.+|||..+ ..+.++++||+++||++||++||++
T Consensus 146 Ya~~~~~~~gd~V~~w~T~NEp~~~~~~~y~~g~~~p~~~~-----------~~~~~~~~h~~l~AHa~A~~~~~~~--- 211 (455)
T PF00232_consen 146 YAEFVFERFGDRVKYWITFNEPNVFALLGYLYGGFPPGRDS-----------LKAFYQAAHNLLLAHAKAVKAIKEK--- 211 (455)
T ss_dssp HHHHHHHHHTTTBSEEEEEETHHHHHHHHHTSSSSTTCSST-----------HHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHhCCCcceEEeccccceeeccccccccccccccc-----------cchhhHHHhhHHHHHHHHHHHHhhc---
Confidence 99999999999999999999999999999999999999654 7889999999999999999999996
Q ss_pred CCCCcEEEEecCceeecCCCCHHHH-HHHHHHHHHhccccccchhcCCCcHHHHHHHhhc--CCCCChHHHHhhcCCCcE
Q 014339 161 DQGGSIGIILNTLWFEPISSSTADK-LAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGST--LPKFSSRDKEKLKQGLDF 237 (426)
Q Consensus 161 ~~~~~iGi~~~~~~~~p~~~~~~d~-~aa~~~~~~~~~~~~d~~~~G~yp~~~~~~l~~~--lp~~t~~d~~~lk~~~Df 237 (426)
.++++||++++..+++|.+++++|+ +||++.+++.++||+||+++|+||..|+++++++ +|.||++|++.|++++||
T Consensus 212 ~~~~~IGi~~~~~~~~P~~~~~~d~~~Aa~~~~~~~n~~f~dpi~~G~YP~~~~~~~~~~~~lp~ft~ed~~~ikg~~DF 291 (455)
T PF00232_consen 212 YPDGKIGIALNFSPFYPLSPSPEDDVAAAERADEFHNGWFLDPIFKGDYPEEMKEYLGERGILPEFTEEDKELIKGSIDF 291 (455)
T ss_dssp TCTSEEEEEEEEEEEEESSSSHHHHHHHHHHHHHHHTHHHHHHHHHSSSEHHHHHHHGGGTSSTTSGHHHHHHHTTTTSE
T ss_pred ccceEEeccccccccCCCCccchhhHHHHHHHHHHhhcccccCchhhcCChHHhhccccccccccccchhhhcccccchh
Confidence 5999999999999999999888776 8999999999999999999999999999999988 999999999999999999
Q ss_pred EEcccCCcceeeccccCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCcccChHHHHHHHHHHHHHcCCCCEEEeec
Q 014339 238 IGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKIIKYIKERYKNTPMFITEN 317 (426)
Q Consensus 238 iGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~w~~i~P~gl~~~L~~~~~rY~~~PI~ITEN 317 (426)
||||||++..|+..+.+..... ............+.++.++++| +++|+||+++|++++++|+++||+||||
T Consensus 292 lGiNYYt~~~v~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~t~~gw-~i~P~Gl~~~L~~l~~~Y~~~pI~ITEN 363 (455)
T PF00232_consen 292 LGINYYTSRYVRADPNPSSPPS-------YDSDAPFGQPYNPGGPTTDWGW-EIYPEGLRDVLRYLKDRYGNPPIYITEN 363 (455)
T ss_dssp EEEEESEEEEEEESSSSTSSTT-------HEEEESEEEECETSSEBCTTST-BBETHHHHHHHHHHHHHHTSSEEEEEEE
T ss_pred hhhccccceeeccCcccccccc-------ccCCccccccccccccccccCc-ccccchHhhhhhhhccccCCCcEEEecc
Confidence 9999999999987653321110 0000000000124456789999 7899999999999999999899999999
Q ss_pred CCcCCCCCCCCCCCccCcHhHHHHHHHHHHHHHHHHHcCCCEEEEEeecCCcccccCCCCcceeeeEEec-CCCCccccc
Q 014339 318 GYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADVRGYFVWSLLDSFEWTYGYTARFGLHHVD-FATLKRTPK 396 (426)
Q Consensus 318 G~~~~~~~~~~~~~~v~D~~Ri~yl~~~l~~v~~Ai~dGv~V~GY~~WSl~Dn~EW~~Gy~~rfGL~~VD-~~~~~R~pK 396 (426)
|+++.++.. ++.++|+.|++||++||++|++||+|||+|+||++|||||||||.+||++||||++|| ..|++|+||
T Consensus 364 G~~~~~~~~---~~~v~D~~Ri~yl~~hl~~v~~Ai~dGv~V~GY~~WSl~Dn~Ew~~Gy~~rfGl~~VD~~~~~~R~pK 440 (455)
T PF00232_consen 364 GIGDPDEVD---DGKVDDDYRIDYLQDHLNQVLKAIEDGVNVRGYFAWSLLDNFEWAEGYKKRFGLVYVDFFDTLKRTPK 440 (455)
T ss_dssp ---EETTCT---TSHBSHHHHHHHHHHHHHHHHHHHHTT-EEEEEEEETSB---BGGGGGGSE--SEEEETTTTTEEEEB
T ss_pred ccccccccc---ccCcCcHHHHHHHHHHHHHHHhhhccCCCeeeEeeeccccccccccCccCccCceEEcCCCCcCeeec
Confidence 999876543 3789999999999999999999999999999999999999999999999999999999 788999999
Q ss_pred chHHHHHHHHHhCCC
Q 014339 397 LSATWYKHFIAKHKL 411 (426)
Q Consensus 397 ~S~~~y~~ii~~~~~ 411 (426)
+|++||+++|++||+
T Consensus 441 ~S~~~y~~~i~~ng~ 455 (455)
T PF00232_consen 441 KSAYWYKDFIRSNGF 455 (455)
T ss_dssp HHHHHHHHHHHHTEE
T ss_pred cHHHHHHHHHHhcCC
Confidence 999999999999863
No 8
>PRK09593 arb 6-phospho-beta-glucosidase; Reviewed
Probab=100.00 E-value=1.8e-108 Score=852.11 Aligned_cols=382 Identities=29% Similarity=0.506 Sum_probs=336.8
Q ss_pred CcccCCCeEEeccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHHH
Q 014339 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGY 80 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~ 80 (426)
||+||+++||||||||||+|+|..|.+|++||+||++||++|+++||+|||||||||||+||++++|||+|++++++|++
T Consensus 82 m~~lG~~aYRfSIsWsRI~P~G~~~~~N~~gl~~Y~~lId~L~~~GI~P~VTL~H~dlP~~L~~~~GGW~n~~~v~~F~~ 161 (478)
T PRK09593 82 FAEMGFKTYRMSIAWTRIFPKGDELEPNEAGLQFYEDIFKECHKYGIEPLVTITHFDCPMHLIEEYGGWRNRKMVGFYER 161 (478)
T ss_pred HHHcCCCEEEEecchhhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecccCCCHHHHhhcCCCCChHHHHHHHH
Confidence 78999999999999999999985467999999999999999999999999999999999999998999999999999999
Q ss_pred HHHHHHHHhCCceeEEEeccCchhhhhhccc-cCC-CCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhh
Q 014339 81 FADICFKSFGDRVKYWFTINEPNMQVTLSYR-LGC-HPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKY 158 (426)
Q Consensus 81 ya~~~~~~fg~~V~~w~t~NEP~~~~~~gy~-~G~-~pPg~~~~~~~~~~~~~~~~~~~~~~h~~l~Aha~a~~~~~~~~ 158 (426)
||+.||++|||+||+|+||||||+++..||. .|. +|||... ..+.++|+||+++|||+||++||+.
T Consensus 162 YA~~~~~~fgdrVk~WiT~NEP~~~~~~~~~~~g~~~~~g~~~-----------~~~~~~a~h~~llAHa~A~~~~~~~- 229 (478)
T PRK09593 162 LCRTLFTRYKGLVKYWLTFNEINMILHAPFMGAGLYFEEGENK-----------EQVKYQAAHHELVASAIATKIAHEV- 229 (478)
T ss_pred HHHHHHHHhcCcCCEEEeecchhhhhcccccccCcccCCCCch-----------hhhHHHHHHHHHHHHHHHHHHHHHh-
Confidence 9999999999999999999999999988886 554 3776422 3568999999999999999999984
Q ss_pred ccCCCCcEEEEecCceeecCCCCHHHHHHHHHHHHHhccccccchhcCCCcHHHHHHHhh--cCCCCChHHHHhhc-CCC
Q 014339 159 QKDQGGSIGIILNTLWFEPISSSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGS--TLPKFSSRDKEKLK-QGL 235 (426)
Q Consensus 159 ~~~~~~~iGi~~~~~~~~p~~~~~~d~~aa~~~~~~~~~~~~d~~~~G~yp~~~~~~l~~--~lp~~t~~d~~~lk-~~~ 235 (426)
.|+++||++++..+++|.+++++|++||++++ +.+.||+||++.|+||+.|++++++ .+|.|+++|+++++ +++
T Consensus 230 --~~~g~VGi~~~~~~~~P~~~~~~D~~aa~~~~-~~~~~fld~~~~G~YP~~~~~~~~~~~~~~~~~~~d~~~ik~g~~ 306 (478)
T PRK09593 230 --DPENKVGCMLAAGQYYPNTCHPEDVWAAMKED-RENYFFIDVQARGEYPNYAKKRFEREGITIEMTEEDLELLKENTV 306 (478)
T ss_pred --CCCCeEEEEEeCCeeEeCCCCHHHHHHHHHHH-HHhhhhhhhhhCCCccHHHHHHHHhcCCCCCCCHHHHHHHhcCCC
Confidence 78899999999999999999999999999887 4578999999999999999999986 46789999999996 999
Q ss_pred cEEEcccCCcceeeccccCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCcccChHHHHHHHHHHHHHcCCCCEEEe
Q 014339 236 DFIGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKIIKYIKERYKNTPMFIT 315 (426)
Q Consensus 236 DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~w~~i~P~gl~~~L~~~~~rY~~~PI~IT 315 (426)
||||||||++.+|+......... ..... .... .|..+.+++|| +|+|+||+.+|++++++|+ .|||||
T Consensus 307 DFlGiNyYt~~~v~~~~~~~~~~-------~~~~~-~~~~--~p~~~~~~~gw-~i~P~Gl~~~l~~~~~~Y~-~Pi~It 374 (478)
T PRK09593 307 DFISFSYYSSRVASGDPKVNEKT-------AGNIF-ASLK--NPYLKASEWGW-QIDPLGLRITLNTIWDRYQ-KPMFIV 374 (478)
T ss_pred CEEEEecccCcccccCCCCCCCC-------CCCcc-cccc--CCCcccCCCCC-EECHHHHHHHHHHHHHHcC-CCEEEE
Confidence 99999999999987532110000 00000 0001 24456788999 8999999999999999997 589999
Q ss_pred ecCCcCCCCCCCCCCCccCcHhHHHHHHHHHHHHHHHHH-cCCCEEEEEeecCCcccccCCC-CcceeeeEEecCCC---
Q 014339 316 ENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVR-DGADVRGYFVWSLLDSFEWTYG-YTARFGLHHVDFAT--- 390 (426)
Q Consensus 316 ENG~~~~~~~~~~~~~~v~D~~Ri~yl~~~l~~v~~Ai~-dGv~V~GY~~WSl~Dn~EW~~G-y~~rfGL~~VD~~~--- 390 (426)
|||++..+.. +.++.++|+.||+||++||++|++||+ |||+|+|||+|||||||||.+| |++||||++||++|
T Consensus 375 ENG~~~~d~~--~~~g~i~D~~Ri~yl~~hl~~~~~Ai~~dGv~v~GY~~WSl~Dn~EW~~G~y~~RfGl~~VD~~~~~~ 452 (478)
T PRK09593 375 ENGLGAVDKP--DENGYVEDDYRIDYLAAHIKAMRDAINEDGVELLGYTTWGCIDLVSAGTGEMKKRYGFIYVDRDNEGK 452 (478)
T ss_pred cCCCCCCCCC--CCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEeeccchHhhcccCCCccCeeceEEECCCCCCC
Confidence 9999976543 235789999999999999999999995 9999999999999999999999 99999999999994
Q ss_pred --CcccccchHHHHHHHHHhCCC
Q 014339 391 --LKRTPKLSATWYKHFIAKHKL 411 (426)
Q Consensus 391 --~~R~pK~S~~~y~~ii~~~~~ 411 (426)
++|+||+|++||+++|++++.
T Consensus 453 ~~~~R~pK~S~~wy~~ii~~~~~ 475 (478)
T PRK09593 453 GTLKRSKKKSFDWYKKVIASNGE 475 (478)
T ss_pred cccceecccHHHHHHHHHHhCCc
Confidence 699999999999999998876
No 9
>COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.7e-109 Score=830.49 Aligned_cols=382 Identities=41% Similarity=0.739 Sum_probs=344.0
Q ss_pred CcccCCCeEEeccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHHH
Q 014339 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGY 80 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~ 80 (426)
|||||+++|||||+||||+|+|..+++|++||+||+++||+|+++||+|+|||+|||+|+||++++|||+|++++++|++
T Consensus 68 ~~emG~~~~R~SI~WsRIfP~g~~~e~N~~gl~fY~~l~del~~~gIep~vTL~Hfd~P~~L~~~ygGW~nR~~i~~F~~ 147 (460)
T COG2723 68 AKEMGLNAFRTSIEWSRIFPNGDGGEVNEKGLRFYDRLFDELKARGIEPFVTLYHFDLPLWLQKPYGGWENRETVDAFAR 147 (460)
T ss_pred HHHcCCCEEEeeeeEEEeecCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEecccCCcHHHhhccCCccCHHHHHHHHH
Confidence 68999999999999999999986348999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCceeEEEeccCchhhhhhccccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhcc
Q 014339 81 FADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQK 160 (426)
Q Consensus 81 ya~~~~~~fg~~V~~w~t~NEP~~~~~~gy~~G~~pPg~~~~~~~~~~~~~~~~~~~~~~h~~l~Aha~a~~~~~~~~~~ 160 (426)
||+.||++|||+||+|+||||||+++.+||+.|.+||+..+ ...++||+||+++|||+|++++|+.
T Consensus 148 ya~~vf~~f~dkVk~W~TFNE~n~~~~~~y~~~~~~p~~~~-----------~~~~~qa~hh~~lA~A~avk~~~~~--- 213 (460)
T COG2723 148 YAATVFERFGDKVKYWFTFNEPNVVVELGYLYGGHPPGIVD-----------PKAAYQVAHHMLLAHALAVKAIKKI--- 213 (460)
T ss_pred HHHHHHHHhcCcceEEEEecchhhhhcccccccccCCCccC-----------HHHHHHHHHHHHHHHHHHHHHHHhh---
Confidence 99999999999999999999999999999999999999764 6889999999999999999999984
Q ss_pred CCCCcEEEEecCceeecCCCCHHHHHHHHHHHHHhccccccchhcCCCcHHHHHHHhhc--CCCCChHHHHhhcC-CCcE
Q 014339 161 DQGGSIGIILNTLWFEPISSSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGST--LPKFSSRDKEKLKQ-GLDF 237 (426)
Q Consensus 161 ~~~~~iGi~~~~~~~~p~~~~~~d~~aa~~~~~~~~~~~~d~~~~G~yp~~~~~~l~~~--lp~~t~~d~~~lk~-~~Df 237 (426)
.|+.+||++++..+.+|.+++++|+.||+.++++.+.+|+||+++|.||..+.+.+++. +|.++++|++.||. ++||
T Consensus 214 ~~~~kIG~~~~~~p~YP~s~~p~dv~aA~~~~~~~n~~FlD~~~~G~yp~~~~~~~~~~~~~~~~~~~Dl~~lk~~~~Df 293 (460)
T COG2723 214 NPKGKVGIILNLTPAYPLSDKPEDVKAAENADRFHNRFFLDAQVKGEYPEYLEKELEENGILPEIEDGDLEILKENTVDF 293 (460)
T ss_pred CCcCceEEEeccCcCCCCCCCHHHHHHHHHHHHHhhhhhcchhhcCcCCHHHHHHHHhcCCCcccCcchHHHHhcCCCCe
Confidence 55559999999999999999999999999999999999999999999999999999875 79999999999986 5899
Q ss_pred EEcccCCc-ceeeccccCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCcccChHHHHHHHHHHHHHcCCCCEEEee
Q 014339 238 IGINHYTS-TYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKIIKYIKERYKNTPMFITE 316 (426)
Q Consensus 238 iGiNyY~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~w~~i~P~gl~~~L~~~~~rY~~~PI~ITE 316 (426)
||+|||++ .+++.........+.. . . ......|..+.+++|| +|+|+||+.+|+++++||+ +||+|||
T Consensus 294 iG~NYY~~s~v~~~~~~~~~~~~~~------~-~--~~~~~~p~~~~sdwGW-eI~P~GL~~~l~~~~~rY~-~p~fItE 362 (460)
T COG2723 294 IGLNYYTPSRVKAAEPRYVSGYGPG------G-F--FTSVPNPGLEVSDWGW-EIYPKGLYDILEKLYERYG-IPLFITE 362 (460)
T ss_pred EEEeeeeeeeEeeccCCcCCccccc------c-c--ccccCCCCCcccCCCc-eeChHHHHHHHHHHHHHhC-CCeEEec
Confidence 99999994 4444322211000000 0 0 0111235567789999 8999999999999999998 9999999
Q ss_pred cCCcCCCCCCCCCCCccCcHhHHHHHHHHHHHHHHHHHcCCCEEEEEeecCCcccccCCCCcceeeeEEecCCC-Ccccc
Q 014339 317 NGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFAT-LKRTP 395 (426)
Q Consensus 317 NG~~~~~~~~~~~~~~v~D~~Ri~yl~~~l~~v~~Ai~dGv~V~GY~~WSl~Dn~EW~~Gy~~rfGL~~VD~~~-~~R~p 395 (426)
||++..+... .+.|+|+.||+||++||.+|++||+|||+|+||++||+|||+||.+||++||||++||++| ++|+|
T Consensus 363 NG~G~~d~~~---~~~i~DdyRI~Yl~~Hl~~v~~AI~dGv~v~GY~~Ws~iD~~sw~~gy~kRYGli~VD~~~~~~R~~ 439 (460)
T COG2723 363 NGLGVKDEVD---FDGINDDYRIDYLKEHLKAVKKAIEDGVDVRGYFAWSLIDNYSWANGYKKRYGLVYVDYDTDLERTP 439 (460)
T ss_pred CCCCcccccc---cCCcCchHHHHHHHHHHHHHHHHHHcCCCcccceecccccccchhhccccccccEEEcccccceeee
Confidence 9999876543 2339999999999999999999999999999999999999999999999999999999999 79999
Q ss_pred cchHHHHHHHHHhCC
Q 014339 396 KLSATWYKHFIAKHK 410 (426)
Q Consensus 396 K~S~~~y~~ii~~~~ 410 (426)
|+|++|||++|++||
T Consensus 440 KkS~~WyK~vi~sng 454 (460)
T COG2723 440 KKSFYWYKEVIESNG 454 (460)
T ss_pred cCceeeeHHHHhcCC
Confidence 999999999999998
No 10
>PRK09589 celA 6-phospho-beta-glucosidase; Reviewed
Probab=100.00 E-value=2.9e-108 Score=850.10 Aligned_cols=382 Identities=29% Similarity=0.515 Sum_probs=332.7
Q ss_pred CcccCCCeEEeccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHHH
Q 014339 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGY 80 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~ 80 (426)
||+||+++|||||+||||+|+|..|.+|++||+||++||++|+++||+|||||||||+|+||++++|||+|++++++|++
T Consensus 76 m~~lG~~~yRfSIsWsRI~P~G~~~~~N~~gl~~Y~~lid~L~~~GI~P~VTL~H~dlP~~L~~~yGGW~n~~~i~~F~~ 155 (476)
T PRK09589 76 FAEMGFKCFRTSIAWTRIFPQGDELEPNEEGLQFYDDLFDECLKQGIEPVVTLSHFEMPYHLVTEYGGWRNRKLIDFFVR 155 (476)
T ss_pred HHHcCCCEEEeccchhhcCcCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCCCHHHHHhcCCcCChHHHHHHHH
Confidence 78999999999999999999985467999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCceeEEEeccCchhhhhh-----ccc-cCC-CCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHH
Q 014339 81 FADICFKSFGDRVKYWFTINEPNMQVTL-----SYR-LGC-HPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDI 153 (426)
Q Consensus 81 ya~~~~~~fg~~V~~w~t~NEP~~~~~~-----gy~-~G~-~pPg~~~~~~~~~~~~~~~~~~~~~~h~~l~Aha~a~~~ 153 (426)
||+.||++|||+||+|+||||||+++.. ||. .|. +|||... ....++++||+++|||+|+++
T Consensus 156 YA~~~f~~fgdrVk~WiT~NEp~~~~~~~~~~~~~~~~g~~~~pg~~~-----------~~~~~~~~h~~llAha~A~~~ 224 (476)
T PRK09589 156 FAEVVFTRYKDKVKYWMTFNEINNQANFSEDFAPFTNSGILYSPGEDR-----------EQIMYQAAHYELVASALAVKT 224 (476)
T ss_pred HHHHHHHHhcCCCCEEEEecchhhhhccccccCCccccccccCCCCch-----------hHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999876 343 443 3565321 345799999999999999999
Q ss_pred HHHhhccCCCCcEEEEecCceeecCCCCHHHHHHHHHHHHHhccccccchhcCCCcHHHHHHHhhc--CCCCChHHHHhh
Q 014339 154 YRTKYQKDQGGSIGIILNTLWFEPISSSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGST--LPKFSSRDKEKL 231 (426)
Q Consensus 154 ~~~~~~~~~~~~iGi~~~~~~~~p~~~~~~d~~aa~~~~~~~~~~~~d~~~~G~yp~~~~~~l~~~--lp~~t~~d~~~l 231 (426)
+|+. .|+++||++++..+++|++++++|++||++++.+ +.||+||++.|+||+.|++.++++ .|.|+++|++.+
T Consensus 225 ~~~~---~~~~~iG~~~~~~~~~P~~~~~~d~~aa~~~~~~-~~~f~d~~~~G~YP~~~~~~~~~~~~~~~~t~~d~~~l 300 (476)
T PRK09589 225 GHEI---NPDFQIGCMIAMCPIYPLTCAPNDMMMATKAMHR-RYWFTDVHVRGYYPQHILNYFARKGFNLDITPEDNAIL 300 (476)
T ss_pred HHHh---CCCCcEEEEEeCCeeeeCCCCHHHHHHHHHHHHh-ccceecceeCCCCcHHHHHHHHhcCCCCCCCHHHHHHH
Confidence 9985 6889999999999999999999999999998854 679999999999999999999864 478999999988
Q ss_pred -cCCCcEEEcccCCcceeeccccCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCcccChHHHHHHHHHHHHHcCCC
Q 014339 232 -KQGLDFIGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKIIKYIKERYKNT 310 (426)
Q Consensus 232 -k~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~w~~i~P~gl~~~L~~~~~rY~~~ 310 (426)
++++||||||||++.+|+...... . .... .. .. ... .|..+.++++| +|+|+||+.+|++++++|+ .
T Consensus 301 ~~g~~DFlGiNyYts~~v~~~~~~~--~--~~~~--~~-~~-~~~--~~~~~~~~~gw-~i~P~Gl~~~L~~~~~~Y~-~ 368 (476)
T PRK09589 301 AEGCVDYIGFSYYMSFATKFHEDNP--Q--LDYV--ET-RD-LVS--NPYVKASEWGW-QIDPAGLRYSLNWFWDHYQ-L 368 (476)
T ss_pred hcCCCCEEEEecccCcccccCCCCC--C--CCcc--cc-cc-ccc--CCCcccCCCCC-ccCcHHHHHHHHHHHHhcC-C
Confidence 689999999999999886421110 0 0000 00 00 001 24446778999 8999999999999999997 6
Q ss_pred CEEEeecCCcCCCCCCCCCCCccCcHhHHHHHHHHHHHHHHHH-HcCCCEEEEEeecCCcccccCCC-CcceeeeEEecC
Q 014339 311 PMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAV-RDGADVRGYFVWSLLDSFEWTYG-YTARFGLHHVDF 388 (426)
Q Consensus 311 PI~ITENG~~~~~~~~~~~~~~v~D~~Ri~yl~~~l~~v~~Ai-~dGv~V~GY~~WSl~Dn~EW~~G-y~~rfGL~~VD~ 388 (426)
||||||||++..+.. +.++.++|+.||+||++||++|++|| +|||+|+|||+|||||||||.+| |++|||||+||+
T Consensus 369 Pi~ItENG~~~~d~~--~~~g~i~D~~Ri~Yl~~hl~~~~~Ai~~dGv~V~GY~~WSl~Dn~Ew~~G~y~~RfGlv~VD~ 446 (476)
T PRK09589 369 PLFIVENGFGAIDQR--EADGTVNDHYRIDYLAAHIREMKKAVVEDGVDLMGYTPWGCIDLVSAGTGEMKKRYGFIYVDK 446 (476)
T ss_pred CEEEEeCCcccCCCC--CcCCcccCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccccccccccCCccccceeeEEEcC
Confidence 899999999976543 23577999999999999999999999 79999999999999999999999 999999999999
Q ss_pred CC-----CcccccchHHHHHHHHHhCCC
Q 014339 389 AT-----LKRTPKLSATWYKHFIAKHKL 411 (426)
Q Consensus 389 ~~-----~~R~pK~S~~~y~~ii~~~~~ 411 (426)
+| ++|+||+|++||+++|++++.
T Consensus 447 ~~~~~~t~~R~pK~S~~wy~~~i~~ng~ 474 (476)
T PRK09589 447 DNEGKGTLERSRKKSFYWYRDVIANNGE 474 (476)
T ss_pred CCCCCcccccccccHHHHHHHHHHhcCC
Confidence 95 699999999999999998764
No 11
>PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional
Probab=100.00 E-value=2.5e-106 Score=833.63 Aligned_cols=382 Identities=28% Similarity=0.490 Sum_probs=339.0
Q ss_pred CcccCCCeEEeccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHHH
Q 014339 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGY 80 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~ 80 (426)
|++||+|+|||||+||||+|+|..+.+|++||+||+++|++|+++||+|||||+|||+|+||++++|||+|++++++|++
T Consensus 80 ~~~lG~~~yR~si~WsRi~P~g~~~~~n~~~~~~Y~~~i~~l~~~gi~p~VtL~H~~~P~~l~~~~GGW~~~~~~~~F~~ 159 (474)
T PRK09852 80 MAEMGFKVFRTSIAWSRLFPQGDELTPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKMVEFFSR 159 (474)
T ss_pred HHHcCCCeEEeeceeeeeeeCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeeCCCCCHHHHHhcCCCCCHHHHHHHHH
Confidence 68999999999999999999985467899999999999999999999999999999999999998999999999999999
Q ss_pred HHHHHHHHhCCceeEEEeccCchhhhhhccc-cCC-CCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhh
Q 014339 81 FADICFKSFGDRVKYWFTINEPNMQVTLSYR-LGC-HPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKY 158 (426)
Q Consensus 81 ya~~~~~~fg~~V~~w~t~NEP~~~~~~gy~-~G~-~pPg~~~~~~~~~~~~~~~~~~~~~~h~~l~Aha~a~~~~~~~~ 158 (426)
||++||++|||+||+|+||||||+++..||. .|. +|||... ....++++||+++|||+||+++|+.
T Consensus 160 ya~~~~~~fgd~Vk~WiTfNEPn~~~~~gy~~~g~~~~p~~~~-----------~~~~~~~~hn~llAHa~A~~~~~~~- 227 (474)
T PRK09852 160 YARTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQ-----------DQVKYQAAHHELVASALATKIAHEV- 227 (474)
T ss_pred HHHHHHHHhcCcCCeEEeecchhhhhccCccccCcccCCCCCc-----------hHhHHHHHHHHHHHHHHHHHHHHHh-
Confidence 9999999999999999999999999999996 675 5887532 3568999999999999999999985
Q ss_pred ccCCCCcEEEEecCceeecCCCCHHHHHHHHHHHHHhccccccchhcCCCcHHHHHHHhhc--CCCCChHHHHhhcCCCc
Q 014339 159 QKDQGGSIGIILNTLWFEPISSSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGST--LPKFSSRDKEKLKQGLD 236 (426)
Q Consensus 159 ~~~~~~~iGi~~~~~~~~p~~~~~~d~~aa~~~~~~~~~~~~d~~~~G~yp~~~~~~l~~~--lp~~t~~d~~~lk~~~D 236 (426)
.++++||++++..+++|++++++|++||++++ +.+.||+||++.|+||+.|++.++++ +|.|+++|+++|++++|
T Consensus 228 --~~~~~IGi~~~~~~~~P~~~~~~d~~AA~~~~-~~~~~~~d~~~~G~YP~~~~~~~~~~~~~p~~~~~d~~~i~~~~D 304 (474)
T PRK09852 228 --NPQNQVGCMLAGGNFYPYSCKPEDVWAALEKD-RENLFFIDVQARGAYPAYSARVFREKGVTIDKAPGDDEILKNTVD 304 (474)
T ss_pred --CCCCeEEEEEeCCeeeeCCCCHHHHHHHHHHH-HHhhhhcchhhCCCccHHHHHHHHhcCCCCCCCHHHHHHhcCCCC
Confidence 67899999999999999999999999998877 45889999999999999999999864 78999999999999999
Q ss_pred EEEcccCCcceeeccccCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCcccChHHHHHHHHHHHHHcCCCCEEEee
Q 014339 237 FIGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKIIKYIKERYKNTPMFITE 316 (426)
Q Consensus 237 fiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~w~~i~P~gl~~~L~~~~~rY~~~PI~ITE 316 (426)
|||||||++.+|+...... .... ... .. . ...|..+.+++|| +|+|+||+.+|++++++|+ .||||||
T Consensus 305 FlGiNyYt~~~v~~~~~~~-~~~~-----~~~-~~-~--~~~p~~~~~~~gw-~i~P~Gl~~~l~~~~~~Y~-~Pi~ItE 372 (474)
T PRK09852 305 FVSFSYYASRCASAEMNAN-NSSA-----ANV-VK-S--LRNPYLQVSDWGW-GIDPLGLRITMNMMYDRYQ-KPLFLVE 372 (474)
T ss_pred EEEEccccCeecccCCCCC-CCCc-----CCc-ee-c--ccCCCcccCCCCC-eeChHHHHHHHHHHHHhcC-CCEEEeC
Confidence 9999999999987532100 0000 000 00 0 0124456788999 8999999999999999997 6899999
Q ss_pred cCCcCCCCCCCCCCCccCcHhHHHHHHHHHHHHHHHHHcCCCEEEEEeecCCcccccCCC-CcceeeeEEecCCC-----
Q 014339 317 NGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADVRGYFVWSLLDSFEWTYG-YTARFGLHHVDFAT----- 390 (426)
Q Consensus 317 NG~~~~~~~~~~~~~~v~D~~Ri~yl~~~l~~v~~Ai~dGv~V~GY~~WSl~Dn~EW~~G-y~~rfGL~~VD~~~----- 390 (426)
||++..+.. +.++.++|+.||+||++||++|++||+|||+|+|||+|||||||||.+| |++||||++||++|
T Consensus 373 NG~~~~d~~--~~~g~i~D~~Ri~Yl~~hl~~~~~Ai~dGv~V~GY~~WSl~Dn~Ew~~G~y~~RfGLv~VD~~~~~~~t 450 (474)
T PRK09852 373 NGLGAKDEI--AANGEINDDYRISYLREHIRAMGEAIADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVYVDRDDAGNGT 450 (474)
T ss_pred CCCCCCCCc--CCCCccCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccccccCCCccceeeeEEECCCCCCCcc
Confidence 999976543 2357799999999999999999999999999999999999999999999 99999999999995
Q ss_pred CcccccchHHHHHHHHHhCCC
Q 014339 391 LKRTPKLSATWYKHFIAKHKL 411 (426)
Q Consensus 391 ~~R~pK~S~~~y~~ii~~~~~ 411 (426)
++|+||+|++||+++|++|+.
T Consensus 451 ~~R~pK~S~~wy~~ii~~ng~ 471 (474)
T PRK09852 451 LTRTRKKSFWWYKKVIASNGE 471 (474)
T ss_pred cceecccHHHHHHHHHHhCCc
Confidence 699999999999999998876
No 12
>PRK15014 6-phospho-beta-glucosidase BglA; Provisional
Probab=100.00 E-value=4.6e-106 Score=833.07 Aligned_cols=381 Identities=29% Similarity=0.520 Sum_probs=332.6
Q ss_pred CcccCCCeEEeccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHHH
Q 014339 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGY 80 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~ 80 (426)
||+||+++|||||+||||+|+|..|.+|++||+||+++|++|+++||+|+|||||||+|+||++++|||+|++++++|++
T Consensus 78 m~elG~~~yRfSIsWsRI~P~G~~~~~N~~gl~~Y~~lid~l~~~GI~P~vTL~H~dlP~~L~~~yGGW~n~~~~~~F~~ 157 (477)
T PRK15014 78 FAEMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHLVQQYGSWTNRKVVDFFVR 157 (477)
T ss_pred HHHcCCCEEEecccceeeccCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeeCCCCCHHHHHhcCCCCChHHHHHHHH
Confidence 78999999999999999999985467999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCceeEEEeccCchhh-----hhhcccc-CCC-CCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHH
Q 014339 81 FADICFKSFGDRVKYWFTINEPNMQ-----VTLSYRL-GCH-PPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDI 153 (426)
Q Consensus 81 ya~~~~~~fg~~V~~w~t~NEP~~~-----~~~gy~~-G~~-pPg~~~~~~~~~~~~~~~~~~~~~~h~~l~Aha~a~~~ 153 (426)
||+.||++|||+|++|+||||||++ +..||.. |.+ ||+.. +..+.++|+||+++|||+||++
T Consensus 158 Ya~~~f~~fgdrVk~WiT~NEp~~~~~~~~~~~gy~~~g~~~~~~~~-----------~~~~~~~~~h~~llAHa~A~~~ 226 (477)
T PRK15014 158 FAEVVFERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHEN-----------PEETMYQVLHHQFVASALAVKA 226 (477)
T ss_pred HHHHHHHHhcCcCCEEEEecCcccccccccccccccccccccCCCCc-----------hhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999987 7778874 775 45432 1356899999999999999999
Q ss_pred HHHhhccCCCCcEEEEecCceeecCCCCHHHHHHHHHHHHHhccccccchhcCCCcHHHHHHHhhcC--CCCChHHHHhh
Q 014339 154 YRTKYQKDQGGSIGIILNTLWFEPISSSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTL--PKFSSRDKEKL 231 (426)
Q Consensus 154 ~~~~~~~~~~~~iGi~~~~~~~~p~~~~~~d~~aa~~~~~~~~~~~~d~~~~G~yp~~~~~~l~~~l--p~~t~~d~~~l 231 (426)
+|+. .|+++||++++..+++|.+++++|++||++++. ...||+||++.|+||+.|++.++++. |.++++|++.+
T Consensus 227 ~~~~---~~~~~IGi~~~~~~~~P~~~~~~D~~Aa~~~~~-~~~~f~d~~~~G~YP~~~~~~~~~~~~~~~~~~~d~~~i 302 (477)
T PRK15014 227 ARRI---NPEMKVGCMLAMVPLYPYSCNPDDVMFAQESMR-ERYVFTDVQLRGYYPSYVLNEWERRGFNIKMEDGDLDVL 302 (477)
T ss_pred HHHh---CCCCeEEEEEeCceeccCCCCHHHHHHHHHHHH-hcccccccccCCCCCHHHHHHHHhcCCCCCCCHHHHHHH
Confidence 9985 678999999999999999999999999998774 23359999999999999999998764 78999999988
Q ss_pred -cCCCcEEEcccCCcceeeccccCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCcccChHHHHHHHHHHHHHcCCC
Q 014339 232 -KQGLDFIGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKIIKYIKERYKNT 310 (426)
Q Consensus 232 -k~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~w~~i~P~gl~~~L~~~~~rY~~~ 310 (426)
++++||||||||++.+|+......... .+ ...... .|..+.+++|| +|+|+||+.+|++++++|+ .
T Consensus 303 ~~~~~DFlGiNyYt~~~v~~~~~~~~~~-------~~--~~~~~~--~~~~~~~~~gw-~i~P~Gl~~~l~~~~~~Y~-~ 369 (477)
T PRK15014 303 REGTCDYLGFSYYMTNAVKAEGGTGDAI-------SG--FEGSVP--NPYVKASDWGW-QIDPVGLRYALCELYERYQ-K 369 (477)
T ss_pred hcCCCCEEEEcceeCeeeccCCCCCCCc-------cc--cccccC--CCCcccCCCCC-ccCcHHHHHHHHHHHHhcC-C
Confidence 589999999999999886422100000 00 000001 23345678999 8999999999999999997 6
Q ss_pred CEEEeecCCcCCCCCCCCCCCccCcHhHHHHHHHHHHHHHHHHH-cCCCEEEEEeecCCcccccCCC-CcceeeeEEecC
Q 014339 311 PMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVR-DGADVRGYFVWSLLDSFEWTYG-YTARFGLHHVDF 388 (426)
Q Consensus 311 PI~ITENG~~~~~~~~~~~~~~v~D~~Ri~yl~~~l~~v~~Ai~-dGv~V~GY~~WSl~Dn~EW~~G-y~~rfGL~~VD~ 388 (426)
||+|||||++..+.. +.++.++|+.||+||++||++|++||+ |||+|+||++|||||||||.+| |++||||++||+
T Consensus 370 Pi~ItENG~~~~d~~--~~~g~i~D~~Ri~Yl~~hl~~l~~Ai~~dGv~v~GY~~WSl~DnfEw~~G~y~~RfGl~~VD~ 447 (477)
T PRK15014 370 PLFIVENGFGAYDKV--EEDGSINDDYRIDYLRAHIEEMKKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNK 447 (477)
T ss_pred CEEEeCCCCCCCCCc--CcCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEeeccchhhhcccCCCccCccceEEECC
Confidence 899999999986543 235779999999999999999999996 9999999999999999999999 999999999999
Q ss_pred CC-----CcccccchHHHHHHHHHhCCC
Q 014339 389 AT-----LKRTPKLSATWYKHFIAKHKL 411 (426)
Q Consensus 389 ~~-----~~R~pK~S~~~y~~ii~~~~~ 411 (426)
+| ++|+||+|++||+++|++|+.
T Consensus 448 ~~~~~~~~~R~pK~S~~wy~~ii~~ng~ 475 (477)
T PRK15014 448 HDDGTGDMSRSRKKSFNWYKEVIASNGE 475 (477)
T ss_pred CCCCCcccceecccHHHHHHHHHHhcCC
Confidence 95 699999999999999998764
No 13
>TIGR03356 BGL beta-galactosidase.
Probab=100.00 E-value=3.3e-103 Score=804.95 Aligned_cols=365 Identities=44% Similarity=0.805 Sum_probs=333.9
Q ss_pred CcccCCCeEEeccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHHH
Q 014339 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGY 80 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~ 80 (426)
||+||+++|||||+|+||+|+|. |.+|++|++||+++|++|+++||+|||||||||+|+||+++ |||+|+++++.|++
T Consensus 63 ~~~~G~~~~R~si~Wsri~p~g~-~~~n~~~~~~y~~~i~~l~~~gi~pivtL~Hfd~P~~l~~~-gGw~~~~~~~~f~~ 140 (427)
T TIGR03356 63 MKELGVDAYRFSIAWPRIFPEGT-GPVNPKGLDFYDRLVDELLEAGIEPFVTLYHWDLPQALEDR-GGWLNRDTAEWFAE 140 (427)
T ss_pred HHHcCCCeEEcccchhhcccCCC-CCcCHHHHHHHHHHHHHHHHcCCeeEEeeccCCccHHHHhc-CCCCChHHHHHHHH
Confidence 68999999999999999999976 89999999999999999999999999999999999999988 99999999999999
Q ss_pred HHHHHHHHhCCceeEEEeccCchhhhhhccccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhcc
Q 014339 81 FADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQK 160 (426)
Q Consensus 81 ya~~~~~~fg~~V~~w~t~NEP~~~~~~gy~~G~~pPg~~~~~~~~~~~~~~~~~~~~~~h~~l~Aha~a~~~~~~~~~~ 160 (426)
||+.|+++|||+|++|+||||||+++..||..|.+||+.++ ..+.++++||+++|||+|+++||++
T Consensus 141 ya~~~~~~~~d~v~~w~t~NEp~~~~~~~y~~G~~~P~~~~-----------~~~~~~~~hnll~Aha~A~~~~~~~--- 206 (427)
T TIGR03356 141 YAAVVAERLGDRVKHWITLNEPWCSAFLGYGLGVHAPGLRD-----------LRAALQAAHHLLLAHGLAVQALRAN--- 206 (427)
T ss_pred HHHHHHHHhCCcCCEEEEecCcceecccchhhccCCCCCcc-----------HHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 99999999999999999999999999999999999999643 3567999999999999999999985
Q ss_pred CCCCcEEEEecCceeecCCCCHHHHHHHHHHHHHhccccccchhcCCCcHHHHHHHhhcCCCCChHHHHhhcCCCcEEEc
Q 014339 161 DQGGSIGIILNTLWFEPISSSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFIGI 240 (426)
Q Consensus 161 ~~~~~iGi~~~~~~~~p~~~~~~d~~aa~~~~~~~~~~~~d~~~~G~yp~~~~~~l~~~lp~~t~~d~~~lk~~~DfiGi 240 (426)
.|+++||++++..+++|.+++++|+.||++++++.++||+||++.|+||+.|++.++ .+|.||++|++.+++++|||||
T Consensus 207 ~~~~~IGi~~~~~~~~P~~~~~~d~~aa~~~~~~~~~~f~d~~~~G~yP~~~~~~l~-~~p~~~~~d~~~l~~~~DFiGi 285 (427)
T TIGR03356 207 GPGAQVGIVLNLTPVYPASDSPEDVAAARRADGLLNRWFLDPLLKGRYPEDLLEYLG-DAPFVQDGDLETIAQPLDFLGI 285 (427)
T ss_pred CCCCeEEEEEeCCeeeeCCCCHHHHHHHHHHHHHHhhhhhHHHhCCCCCHHHHHHhc-cCCCCCHHHHHHhcCCCCEEEE
Confidence 689999999999999999999999999999999999999999999999999999997 4799999999999999999999
Q ss_pred ccCCcceeeccccCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCcccChHHHHHHHHHHHHHcCCCCEEEeecCCc
Q 014339 241 NHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKIIKYIKERYKNTPMFITENGYG 320 (426)
Q Consensus 241 NyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~w~~i~P~gl~~~L~~~~~rY~~~PI~ITENG~~ 320 (426)
|||++.+|+..... .. ... ...+..+.++++| +++|+||+.+|+++++||+++||+|||||++
T Consensus 286 NyY~~~~v~~~~~~--~~--------~~~------~~~~~~~~~~~gw-~i~P~Gl~~~L~~~~~rY~~ppi~ITENG~~ 348 (427)
T TIGR03356 286 NYYTRSVVAADPGT--GA--------GFV------EVPEGVPKTAMGW-EVYPEGLYDLLLRLKEDYPGPPIYITENGAA 348 (427)
T ss_pred eccccceeccCCCC--CC--------Ccc------ccCCCCCcCCCCC-eechHHHHHHHHHHHHhcCCCCEEEeCCCCC
Confidence 99999988653210 00 000 0112335677999 8999999999999999998779999999999
Q ss_pred CCCCCCCCCCCccCcHhHHHHHHHHHHHHHHHHHcCCCEEEEEeecCCcccccCCCCcceeeeEEecCCCCcccccchHH
Q 014339 321 EICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSAT 400 (426)
Q Consensus 321 ~~~~~~~~~~~~v~D~~Ri~yl~~~l~~v~~Ai~dGv~V~GY~~WSl~Dn~EW~~Gy~~rfGL~~VD~~~~~R~pK~S~~ 400 (426)
..+.. + ++.++|+.||+||++||++|++||+|||+|+||++|||+|||||.+||++||||++||++|++|+||+|++
T Consensus 349 ~~d~~--~-~g~~~D~~Ri~yl~~hl~~~~~Ai~dGv~v~GY~~Wsl~Dn~ew~~gy~~rfGl~~VD~~~~~R~~K~S~~ 425 (427)
T TIGR03356 349 FDDEV--T-DGEVHDPERIAYLRDHLAALARAIEEGVDVRGYFVWSLLDNFEWAEGYSKRFGLVHVDYETQKRTPKDSAK 425 (427)
T ss_pred cCCCC--c-CCCcCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEecccccccchhcccccccceEEECCCCCcccccceee
Confidence 76543 2 56789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HH
Q 014339 401 WY 402 (426)
Q Consensus 401 ~y 402 (426)
||
T Consensus 426 wy 427 (427)
T TIGR03356 426 WY 427 (427)
T ss_pred eC
Confidence 97
No 14
>smart00633 Glyco_10 Glycosyl hydrolase family 10.
Probab=99.73 E-value=1.2e-15 Score=147.01 Aligned_cols=251 Identities=15% Similarity=0.158 Sum_probs=163.2
Q ss_pred cccccccccCCCCCCChHHHHHHHHHHHHHHHcCCe--EEEEeccCCCchhHHHhhCCCCChhhHHHHHHHHHHHHHHhC
Q 014339 13 ISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQ--PFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFG 90 (426)
Q Consensus 13 i~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~--P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~ya~~~~~~fg 90 (426)
+-|++|+|+. |.+|.+..+ ++++.|+++||+ ..+.+.|...|.|+... + .++..+.+.+|++.+++||+
T Consensus 1 ~kW~~~ep~~--G~~n~~~~D---~~~~~a~~~gi~v~gH~l~W~~~~P~W~~~~--~--~~~~~~~~~~~i~~v~~ry~ 71 (254)
T smart00633 1 MKWDSTEPSR--GQFNFSGAD---AIVNFAKENGIKVRGHTLVWHSQTPDWVFNL--S--KETLLARLENHIKTVVGRYK 71 (254)
T ss_pred CCcccccCCC--CccChHHHH---HHHHHHHHCCCEEEEEEEeecccCCHhhhcC--C--HHHHHHHHHHHHHHHHHHhC
Confidence 3699999997 999998655 899999999999 56677888999998743 2 57788999999999999999
Q ss_pred CceeEEEeccCchhhhhhccccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhccCCCCcEEEEe
Q 014339 91 DRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIIL 170 (426)
Q Consensus 91 ~~V~~w~t~NEP~~~~~~gy~~G~~pPg~~~~~~~~~~~~~~~~~~~~~~h~~l~Aha~a~~~~~~~~~~~~~~~iGi~~ 170 (426)
++|..|-++|||...- | +|.+. ...+.++-.-. -..|.++.|+ ..|++++=+
T Consensus 72 g~i~~wdV~NE~~~~~------~---~~~~~------------~~w~~~~G~~~--i~~af~~ar~---~~P~a~l~~-- 123 (254)
T smart00633 72 GKIYAWDVVNEALHDN------G---SGLRR------------SVWYQILGEDY--IEKAFRYARE---ADPDAKLFY-- 123 (254)
T ss_pred CcceEEEEeeecccCC------C---ccccc------------chHHHhcChHH--HHHHHHHHHH---hCCCCEEEE--
Confidence 9999999999997421 0 11111 01111110011 1245666666 478877733
Q ss_pred cCceeecCCCCHHHHHHHHHHHHHhccccccchhcCCCcHHHHHHHhhcCCCCChHHHHhhcCCCcEEEcccCCcceeec
Q 014339 171 NTLWFEPISSSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFIGINHYTSTYVQD 250 (426)
Q Consensus 171 ~~~~~~p~~~~~~d~~aa~~~~~~~~~~~~d~~~~G~yp~~~~~~l~~~lp~~t~~d~~~lk~~~DfiGiNyY~~~~v~~ 250 (426)
|--... +.. .. ......+ .+ ++..-...+|-||++.... .
T Consensus 124 Ndy~~~--~~~-~k---~~~~~~~------------------v~------------~l~~~g~~iDgiGlQ~H~~---~- 163 (254)
T smart00633 124 NDYNTE--EPN-AK---RQAIYEL------------------VK------------KLKAKGVPIDGIGLQSHLS---L- 163 (254)
T ss_pred eccCCc--Ccc-HH---HHHHHHH------------------HH------------HHHHCCCccceeeeeeeec---C-
Confidence 311000 110 00 0111111 11 1111233589999953211 0
Q ss_pred cccCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCcccChHHHHHHHHHHHHHcCCCCEEEeecCCcCCCCCCCCCC
Q 014339 251 CIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKIIKYIKERYKNTPMFITENGYGEICMPNSSTE 330 (426)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~w~~i~P~gl~~~L~~~~~rY~~~PI~ITENG~~~~~~~~~~~~ 330 (426)
. ...|..|...|+.+.+. ++||+|||.++....
T Consensus 164 -~-------------------------------------~~~~~~~~~~l~~~~~~--g~pi~iTE~dv~~~~------- 196 (254)
T smart00633 164 -G-------------------------------------SPNIAEIRAALDRFASL--GLEIQITELDISGYP------- 196 (254)
T ss_pred -C-------------------------------------CCCHHHHHHHHHHHHHc--CCceEEEEeecCCCC-------
Confidence 0 01245689999999765 599999999997642
Q ss_pred CccCcHhHHHHHHHHHHHHHHHHHcCCCEEEEEeecCCcccccCCCCcceeeeEEecCCCCcccccchHHH
Q 014339 331 DLLNDVKRVEYMASYLDALITAVRDGADVRGYFVWSLLDSFEWTYGYTARFGLHHVDFATLKRTPKLSATW 401 (426)
Q Consensus 331 ~~v~D~~Ri~yl~~~l~~v~~Ai~dGv~V~GY~~WSl~Dn~EW~~Gy~~rfGL~~VD~~~~~R~pK~S~~~ 401 (426)
....+.+++++.+..+ .+--.|.|.+.|.+.|..+|..+ .+.||+.-|++ ||+++.+
T Consensus 197 ---~~~~qA~~~~~~l~~~----~~~p~v~gi~~Wg~~d~~~W~~~--~~~~L~d~~~~-----~kpa~~~ 253 (254)
T smart00633 197 ---NPQAQAADYEEVFKAC----LAHPAVTGVTVWGVTDKYSWLDG--GAPLLFDANYQ-----PKPAYWA 253 (254)
T ss_pred ---cHHHHHHHHHHHHHHH----HcCCCeeEEEEeCCccCCcccCC--CCceeECCCCC-----CChhhhc
Confidence 1256777777766655 33238899999999999999865 57789866654 8988765
No 15
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A ....
Probab=99.27 E-value=1.5e-10 Score=112.12 Aligned_cols=101 Identities=22% Similarity=0.325 Sum_probs=83.0
Q ss_pred CcccCCCeEEecccccccc-ccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCC-CChhhHHHH
Q 014339 1 MESLGVNSYRFSISWARIL-PKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAW-LSPESQEDF 78 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~-P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw-~~~~~~~~f 78 (426)
|+++|+|+.|+-|.|..++ |... +.++...++.++++|+.|.++||.++|+||+. |.|.... +++ ......+.|
T Consensus 30 ~~~~G~n~VRi~v~~~~~~~~~~~-~~~~~~~~~~ld~~v~~a~~~gi~vild~h~~--~~w~~~~-~~~~~~~~~~~~~ 105 (281)
T PF00150_consen 30 LKALGFNTVRIPVGWEAYQEPNPG-YNYDETYLARLDRIVDAAQAYGIYVILDLHNA--PGWANGG-DGYGNNDTAQAWF 105 (281)
T ss_dssp HHHTTESEEEEEEESTSTSTTSTT-TSBTHHHHHHHHHHHHHHHHTT-EEEEEEEES--TTCSSST-STTTTHHHHHHHH
T ss_pred HHHCCCCEEEeCCCHHHhcCCCCC-ccccHHHHHHHHHHHHHHHhCCCeEEEEeccC--ccccccc-cccccchhhHHHH
Confidence 5789999999999998888 4542 56999999999999999999999999999985 7774332 233 345568889
Q ss_pred HHHHHHHHHHhC--CceeEEEeccCchhh
Q 014339 79 GYFADICFKSFG--DRVKYWFTINEPNMQ 105 (426)
Q Consensus 79 ~~ya~~~~~~fg--~~V~~w~t~NEP~~~ 105 (426)
.++.+.++++|+ +.|-.|-.+|||+..
T Consensus 106 ~~~~~~la~~y~~~~~v~~~el~NEP~~~ 134 (281)
T PF00150_consen 106 KSFWRALAKRYKDNPPVVGWELWNEPNGG 134 (281)
T ss_dssp HHHHHHHHHHHTTTTTTEEEESSSSGCST
T ss_pred HhhhhhhccccCCCCcEEEEEecCCcccc
Confidence 999999999994 468899999999853
No 16
>COG3693 XynA Beta-1,4-xylanase [Carbohydrate transport and metabolism]
Probab=99.09 E-value=1.6e-08 Score=98.05 Aligned_cols=269 Identities=16% Similarity=0.166 Sum_probs=160.8
Q ss_pred cccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEE-E-eccCCCchhHHHhhCCCCChhhHHHHHHHHHHHHHHhC
Q 014339 13 ISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFV-T-LTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFG 90 (426)
Q Consensus 13 i~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~v-t-L~H~dlP~~l~~~~ggw~~~~~~~~f~~ya~~~~~~fg 90 (426)
+-|--|+|+. |.+|+++-+ .+++.++++||.--- | +.|--.|.||... -+..+.+.+...++-..|.+||.
T Consensus 67 mKwe~i~p~~--G~f~Fe~AD---~ia~FAr~h~m~lhGHtLvW~~q~P~W~~~~--e~~~~~~~~~~e~hI~tV~~rYk 139 (345)
T COG3693 67 MKWEAIEPER--GRFNFEAAD---AIANFARKHNMPLHGHTLVWHSQVPDWLFGD--ELSKEALAKMVEEHIKTVVGRYK 139 (345)
T ss_pred cccccccCCC--CccCccchH---HHHHHHHHcCCeeccceeeecccCCchhhcc--ccChHHHHHHHHHHHHHHHHhcc
Confidence 3466777765 999998765 999999999997543 3 3455779998631 26778999999999999999999
Q ss_pred CceeEEEeccCchhhhhhccccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhccCCCCcEEEEe
Q 014339 91 DRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQGGSIGIIL 170 (426)
Q Consensus 91 ~~V~~w~t~NEP~~~~~~gy~~G~~pPg~~~~~~~~~~~~~~~~~~~~~~h~~l~Aha~a~~~~~~~~~~~~~~~iGi~~ 170 (426)
+.|.-|=..|||-- ...++..-.|--+. .+.+... .|.+.-|+ +.|+++.=+.
T Consensus 140 g~~~sWDVVNE~vd-d~g~~R~s~w~~~~------------~gpd~I~----------~aF~~Are---adP~AkL~~N- 192 (345)
T COG3693 140 GSVASWDVVNEAVD-DQGSLRRSAWYDGG------------TGPDYIK----------LAFHIARE---ADPDAKLVIN- 192 (345)
T ss_pred CceeEEEecccccC-CCchhhhhhhhccC------------CccHHHH----------HHHHHHHh---hCCCceEEee-
Confidence 99999999999953 22222222221211 1233222 34444455 5888887321
Q ss_pred cCceeecCCCCHHHHHHHHHHHHHhccccccchhcCCCcHHHHHHHhhcCCCCChHHHHhhcC-CCcEEEcccCCcceee
Q 014339 171 NTLWFEPISSSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQ-GLDFIGINHYTSTYVQ 249 (426)
Q Consensus 171 ~~~~~~p~~~~~~d~~aa~~~~~~~~~~~~d~~~~G~yp~~~~~~l~~~lp~~t~~d~~~lk~-~~DfiGiNyY~~~~v~ 249 (426)
.+. ...++ +.... + +. |++.|. -|| ++|-||++.--+.
T Consensus 193 DY~----ie~~~----~kr~~--~-----~n----------lI~~Lk-------------ekG~pIDgiG~QsH~~~--- 231 (345)
T COG3693 193 DYS----IEGNP----AKRNY--V-----LN----------LIEELK-------------EKGAPIDGIGIQSHFSG--- 231 (345)
T ss_pred ccc----ccCCh----HHHHH--H-----HH----------HHHHHH-------------HCCCCccceeeeeeecC---
Confidence 111 11222 11110 1 00 111111 144 4899999865110
Q ss_pred ccccCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCcccChHHHHHHHHHHHHHcCCCCEEEeecCCcCCCCCCCCC
Q 014339 250 DCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKIIKYIKERYKNTPMFITENGYGEICMPNSST 329 (426)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~w~~i~P~gl~~~L~~~~~rY~~~PI~ITENG~~~~~~~~~~~ 329 (426)
+| ..++-.+..+....+. ++||+|||--+......
T Consensus 232 -------------------------------------~~--~~~~~~~~a~~~~~k~--Gl~i~VTELD~~~~~P~---- 266 (345)
T COG3693 232 -------------------------------------DG--PSIEKMRAALLKFSKL--GLPIYVTELDMSDYTPD---- 266 (345)
T ss_pred -------------------------------------CC--CCHHHHHHHHHHHhhc--CCCceEEEeeeeccCCC----
Confidence 11 0112234444444444 48999999998875421
Q ss_pred CCccCcHhHHHHHHHHH--HHHHHHHHcCCCEEEEEeecCCcccccCCCCcceee---eEEecCCCCcccccchHHHHHH
Q 014339 330 EDLLNDVKRVEYMASYL--DALITAVRDGADVRGYFVWSLLDSFEWTYGYTARFG---LHHVDFATLKRTPKLSATWYKH 404 (426)
Q Consensus 330 ~~~v~D~~Ri~yl~~~l--~~v~~Ai~dGv~V~GY~~WSl~Dn~EW~~Gy~~rfG---L~~VD~~~~~R~pK~S~~~y~~ 404 (426)
.+..|-.-++... +.-.........|.+.+.|.++|+++|..|..++++ -.-+|-+ =.||+..++..+
T Consensus 267 ----~~~p~~~~~~~~~~~~~f~~~~~~~~~v~~it~WGi~D~ySWl~g~~~~~~~~rPl~~D~n---~~pKPa~~aI~e 339 (345)
T COG3693 267 ----SGAPRLYLQKAASRAKAFLLLLLNPNQVKAITFWGITDRYSWLRGRDPRRDGLRPLLFDDN---YQPKPAYKAIAE 339 (345)
T ss_pred ----CccHHHHHHHHHHHHHHHHHHHhcccccceEEEeeeccCcccccCCccCcCCCCCcccCCC---CCcchHHHHHHH
Confidence 1223332222221 222223346677999999999999999999888886 1112222 249999999987
Q ss_pred HHHh
Q 014339 405 FIAK 408 (426)
Q Consensus 405 ii~~ 408 (426)
+.+.
T Consensus 340 ~la~ 343 (345)
T COG3693 340 VLAP 343 (345)
T ss_pred HhcC
Confidence 7654
No 17
>PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 10 GH10 from CAZY comprises enzymes with a number of known activities; xylanase (3.2.1.8 from EC); endo-1,3-beta-xylanase (3.2.1.32 from EC); cellobiohydrolase (3.2.1.91 from EC). These enzymes were formerly known as cellulase family F. The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases (3.2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family F [] or as the glycosyl hydrolases family 10 []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1UQZ_A 1UQY_A 1UR2_A 1UR1_A 2CNC_A 1OD8_A 1E0W_A 1E0V_A 1V0M_A 1E0X_B ....
Probab=99.07 E-value=3e-08 Score=98.90 Aligned_cols=267 Identities=18% Similarity=0.240 Sum_probs=157.8
Q ss_pred eccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEE--EEeccCCCchhHHHhhCCCCChh---hHHHHHHHHHHH
Q 014339 11 FSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPF--VTLTQFDSPQEIEDKYGAWLSPE---SQEDFGYFADIC 85 (426)
Q Consensus 11 fsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~--vtL~H~dlP~~l~~~~ggw~~~~---~~~~f~~ya~~~ 85 (426)
-.+-|..++|.. |.+|.+.. +++++-|+++||++- .-+.|=-+|.|+... .-+...+ ..+...+|.+.+
T Consensus 42 N~~Kw~~~e~~~--g~~~~~~~---D~~~~~a~~~g~~vrGH~LvW~~~~P~w~~~~-~~~~~~~~~~~~~~l~~~I~~v 115 (320)
T PF00331_consen 42 NEMKWGSIEPEP--GRFNFESA---DAILDWARENGIKVRGHTLVWHSQTPDWVFNL-ANGSPDEKEELRARLENHIKTV 115 (320)
T ss_dssp STTSHHHHESBT--TBEE-HHH---HHHHHHHHHTT-EEEEEEEEESSSS-HHHHTS-TTSSBHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhcCCC--CccCccch---hHHHHHHHhcCcceeeeeEEEcccccceeeec-cCCCcccHHHHHHHHHHHHHHH
Confidence 357899999998 99999754 599999999999987 345577889999853 1233333 788999999999
Q ss_pred HHHhCC--ceeEEEeccCchhhhhhccccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 014339 86 FKSFGD--RVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQG 163 (426)
Q Consensus 86 ~~~fg~--~V~~w~t~NEP~~~~~~gy~~G~~pPg~~~~~~~~~~~~~~~~~~~~~~h~~l~Aha~a~~~~~~~~~~~~~ 163 (426)
++||++ +|..|=.+|||.---. -+-|.+ ....+.++=. ---..|.+..|+ ..|+
T Consensus 116 ~~~y~~~g~i~~WDVvNE~i~~~~-------~~~~~r------------~~~~~~~lG~--~yi~~aF~~A~~---~~P~ 171 (320)
T PF00331_consen 116 VTRYKDKGRIYAWDVVNEAIDDDG-------NPGGLR------------DSPWYDALGP--DYIADAFRAARE---ADPN 171 (320)
T ss_dssp HHHTTTTTTESEEEEEES-B-TTS-------SSSSBC------------TSHHHHHHTT--CHHHHHHHHHHH---HHTT
T ss_pred HhHhccccceEEEEEeeecccCCC-------cccccc------------CChhhhcccH--hHHHHHHHHHHH---hCCC
Confidence 999994 8999999999953211 011111 1122222110 011234444454 3677
Q ss_pred CcEEEEecCceeecCCCCHHHHHHHHHHHHHhccccccchhcCCCcHHHHHHHhhcCCCCChHHHHhhcCCCcEEEcccC
Q 014339 164 GSIGIILNTLWFEPISSSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKLKQGLDFIGINHY 243 (426)
Q Consensus 164 ~~iGi~~~~~~~~p~~~~~~d~~aa~~~~~~~~~~~~d~~~~G~yp~~~~~~l~~~lp~~t~~d~~~lk~~~DfiGiNyY 243 (426)
++.=+. ...-..+ +. ...+. .|.+.| ..-..++|-||++-.
T Consensus 172 a~L~~N-Dy~~~~~------~k-----~~~~~---------------~lv~~l------------~~~gvpIdgIG~Q~H 212 (320)
T PF00331_consen 172 AKLFYN-DYNIESP------AK-----RDAYL---------------NLVKDL------------KARGVPIDGIGLQSH 212 (320)
T ss_dssp SEEEEE-ESSTTST------HH-----HHHHH---------------HHHHHH------------HHTTHCS-EEEEEEE
T ss_pred cEEEec-cccccch------HH-----HHHHH---------------HHHHHH------------HhCCCccceechhhc
Confidence 666331 1111111 11 01110 011111 111225899999654
Q ss_pred CcceeeccccCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCcccChHHHHHHHHHHHHHcCCCCEEEeecCCcCCC
Q 014339 244 TSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKIIKYIKERYKNTPMFITENGYGEIC 323 (426)
Q Consensus 244 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~w~~i~P~gl~~~L~~~~~rY~~~PI~ITENG~~~~~ 323 (426)
-.. +. . |..+...|+++.+. ++||.|||..+...+
T Consensus 213 ~~~----------------------------------------~~-~--~~~i~~~l~~~~~~--Gl~i~ITElDv~~~~ 247 (320)
T PF00331_consen 213 FDA----------------------------------------GY-P--PEQIWNALDRFASL--GLPIHITELDVRDDD 247 (320)
T ss_dssp EET----------------------------------------TS-S--HHHHHHHHHHHHTT--TSEEEEEEEEEESSS
T ss_pred cCC----------------------------------------CC-C--HHHHHHHHHHHHHc--CCceEEEeeeecCCC
Confidence 210 00 1 67899999999654 499999999987754
Q ss_pred CCCCCCCCccCcHhHHHHHHHHHHHHHHHHHcCC--CEEEEEeecCCcccccCCCC-cceeeeEEecCCCCcccccchHH
Q 014339 324 MPNSSTEDLLNDVKRVEYMASYLDALITAVRDGA--DVRGYFVWSLLDSFEWTYGY-TARFGLHHVDFATLKRTPKLSAT 400 (426)
Q Consensus 324 ~~~~~~~~~v~D~~Ri~yl~~~l~~v~~Ai~dGv--~V~GY~~WSl~Dn~EW~~Gy-~~rfGL~~VD~~~~~R~pK~S~~ 400 (426)
... ....+..+.+++++.+..+ .+-- .|.|.+.|.+.|+.+|.... ..+=+|+.-|. .|||+++
T Consensus 248 ~~~----~~~~~~~qA~~~~~~~~~~----~~~~~~~v~git~Wg~~D~~sW~~~~~~~~~~lfd~~~-----~~Kpa~~ 314 (320)
T PF00331_consen 248 NPP----DAEEEEAQAEYYRDFLTAC----FSHPPAAVEGITWWGFTDGYSWRPDTPPDRPLLFDEDY-----QPKPAYD 314 (320)
T ss_dssp TTS----CHHHHHHHHHHHHHHHHHH----HHTTHCTEEEEEESSSBTTGSTTGGHSEG--SSB-TTS-----BB-HHHH
T ss_pred CCc----chHHHHHHHHHHHHHHHHH----HhCCccCCCEEEEECCCCCCcccCCCCCCCCeeECCCc-----CCCHHHH
Confidence 210 0112456666666666554 4434 89999999999999998653 23446665555 4999988
Q ss_pred HHHH
Q 014339 401 WYKH 404 (426)
Q Consensus 401 ~y~~ 404 (426)
.+.+
T Consensus 315 ~~~~ 318 (320)
T PF00331_consen 315 AIVD 318 (320)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8765
No 18
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A ....
Probab=99.07 E-value=2.7e-08 Score=98.89 Aligned_cols=245 Identities=18% Similarity=0.282 Sum_probs=139.2
Q ss_pred CcccCCCeEEeccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCC---chhHHHhhCCCCC---hhh
Q 014339 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDS---PQEIEDKYGAWLS---PES 74 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dl---P~~l~~~~ggw~~---~~~ 74 (426)
||+.|+|+.|+-+ | +.|... |.-|. ++-.++..+.+++||+.++++|.=|. |.. |....+|.+ .+.
T Consensus 33 lk~~G~N~vRlRv-w--v~P~~~-g~~~~---~~~~~~akrak~~Gm~vlldfHYSD~WaDPg~-Q~~P~aW~~~~~~~l 104 (332)
T PF07745_consen 33 LKDHGVNAVRLRV-W--VNPYDG-GYNDL---EDVIALAKRAKAAGMKVLLDFHYSDFWADPGK-QNKPAAWANLSFDQL 104 (332)
T ss_dssp HHHTT--EEEEEE----SS-TTT-TTTSH---HHHHHHHHHHHHTT-EEEEEE-SSSS--BTTB--B--TTCTSSSHHHH
T ss_pred HHhcCCCeEEEEe-c--cCCccc-ccCCH---HHHHHHHHHHHHCCCeEEEeecccCCCCCCCC-CCCCccCCCCCHHHH
Confidence 5889999999977 4 345431 55554 46679999999999999999975332 322 223368988 777
Q ss_pred HHHHHHHHHHHHHHh---CCceeEEEeccCchhhhhhccccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHH
Q 014339 75 QEDFGYFADICFKSF---GDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATAV 151 (426)
Q Consensus 75 ~~~f~~ya~~~~~~f---g~~V~~w~t~NEP~~~~~~gy~~G~~pPg~~~~~~~~~~~~~~~~~~~~~~h~~l~Aha~a~ 151 (426)
.+...+|.+.+.+.+ |-.++++.+=||.+. |.+ ||-|.. ..+..+-.++.|-.+|+
T Consensus 105 ~~~v~~yT~~vl~~l~~~G~~pd~VQVGNEin~----Gml---wp~g~~--------------~~~~~~a~ll~ag~~AV 163 (332)
T PF07745_consen 105 AKAVYDYTKDVLQALKAAGVTPDMVQVGNEINN----GML---WPDGKP--------------SNWDNLAKLLNAGIKAV 163 (332)
T ss_dssp HHHHHHHHHHHHHHHHHTT--ESEEEESSSGGG----EST---BTTTCT--------------T-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCccEEEeCccccc----ccc---CcCCCc--------------cCHHHHHHHHHHHHHHH
Confidence 888889999888877 556999999999873 221 444432 22333445666655555
Q ss_pred HHHHHhhccCCCCcEEEEecCceeecCCCCHHHHHHHHHHHHHhccccccchhcCCCcHHHHHHHhhcCCCCChHHHHhh
Q 014339 152 DIYRTKYQKDQGGSIGIILNTLWFEPISSSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSSRDKEKL 231 (426)
Q Consensus 152 ~~~~~~~~~~~~~~iGi~~~~~~~~p~~~~~~d~~aa~~~~~~~~~~~~d~~~~G~yp~~~~~~l~~~lp~~t~~d~~~l 231 (426)
|+ ..|+.+|.+-+.. | .|... ..||.+-+. ..
T Consensus 164 ---r~---~~p~~kV~lH~~~----~-----~~~~~--------~~~~f~~l~-------------------------~~ 195 (332)
T PF07745_consen 164 ---RE---VDPNIKVMLHLAN----G-----GDNDL--------YRWFFDNLK-------------------------AA 195 (332)
T ss_dssp ---HT---HSSTSEEEEEES-----T-----TSHHH--------HHHHHHHHH-------------------------HT
T ss_pred ---Hh---cCCCCcEEEEECC----C-----CchHH--------HHHHHHHHH-------------------------hc
Confidence 44 3788888544432 1 11111 122333221 12
Q ss_pred cCCCcEEEcccCCcceeeccccCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCcccChHHHHHHHHHHHHHcCCCC
Q 014339 232 KQGLDFIGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKIIKYIKERYKNTP 311 (426)
Q Consensus 232 k~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~w~~i~P~gl~~~L~~~~~rY~~~P 311 (426)
...+|.||++||... ......|...|+.+.+||+ +|
T Consensus 196 g~d~DviGlSyYP~w-------------------------------------------~~~l~~l~~~l~~l~~ry~-K~ 231 (332)
T PF07745_consen 196 GVDFDVIGLSYYPFW-------------------------------------------HGTLEDLKNNLNDLASRYG-KP 231 (332)
T ss_dssp TGG-SEEEEEE-STT-------------------------------------------ST-HHHHHHHHHHHHHHHT--E
T ss_pred CCCcceEEEecCCCC-------------------------------------------cchHHHHHHHHHHHHHHhC-Ce
Confidence 236799999999521 0134568999999999995 89
Q ss_pred EEEeecCCcCCCCCCCCCCC-----------ccCcHhHHHHHHHHHHHHHHHHHc--CCCEEEEEeecCCcc
Q 014339 312 MFITENGYGEICMPNSSTED-----------LLNDVKRVEYMASYLDALITAVRD--GADVRGYFVWSLLDS 370 (426)
Q Consensus 312 I~ITENG~~~~~~~~~~~~~-----------~v~D~~Ri~yl~~~l~~v~~Ai~d--Gv~V~GY~~WSl~Dn 370 (426)
|+|+|.|++........... ...-..+.+||++-+ +++.+ +-...|.|+|----.
T Consensus 232 V~V~Et~yp~t~~d~D~~~n~~~~~~~~~~yp~t~~GQ~~~l~~l~----~~v~~~p~~~g~GvfYWeP~w~ 299 (332)
T PF07745_consen 232 VMVVETGYPWTLDDGDGTGNIIGATSLISGYPATPQGQADFLRDLI----NAVKNVPNGGGLGVFYWEPAWI 299 (332)
T ss_dssp EEEEEE---SBS--SSSS--SSSSSTGGTTS-SSHHHHHHHHHHHH----HHHHTS--TTEEEEEEE-TT-G
T ss_pred eEEEeccccccccccccccccCccccccCCCCCCHHHHHHHHHHHH----HHHHHhccCCeEEEEeeccccc
Confidence 99999998765211100000 112245666665544 44453 679999999965433
No 19
>PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 39 GH39 from CAZY comprises enzymes with several known activities; alpha-L-iduronidase (3.2.1.76 from EC); beta-xylosidase (3.2.1.37 from EC). The most highly conserved regions in these enzymes are located in their N-terminal sections. These contain a glutamic acid residue which, on the basis of similarities with other families of glycosyl hydrolases [], probably acts as the proton donor in their catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 2BS9_D 2BFG_E 1W91_B 1UHV_D 1PX8_A.
Probab=99.01 E-value=1.1e-08 Score=107.78 Aligned_cols=283 Identities=21% Similarity=0.317 Sum_probs=132.3
Q ss_pred cccCCCeEEec--c--ccccccc-cCCCCC--CChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHh------hCC
Q 014339 2 ESLGVNSYRFS--I--SWARILP-KGRFGD--VNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDK------YGA 68 (426)
Q Consensus 2 k~lG~~~yRfs--i--~W~RI~P-~~~~g~--~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~------~gg 68 (426)
+++|+...||- + +..-..+ ++. |. +|+. .-|.++|.|+++||+|+|.|-. .|.++... +.|
T Consensus 50 ~~~gf~yvR~h~l~~ddm~~~~~~~~~-~~~~Ynf~---~lD~i~D~l~~~g~~P~vel~f--~p~~~~~~~~~~~~~~~ 123 (486)
T PF01229_consen 50 EELGFRYVRFHGLFSDDMMVYSESDED-GIPPYNFT---YLDQILDFLLENGLKPFVELGF--MPMALASGYQTVFWYKG 123 (486)
T ss_dssp CCS--SEEEES-TTSTTTT-EEEEETT-EEEEE--H---HHHHHHHHHHHCT-EEEEEE-S--B-GGGBSS--EETTTTE
T ss_pred hccCceEEEEEeeccCchhhccccccC-CCCcCChH---HHHHHHHHHHHcCCEEEEEEEe--chhhhcCCCCccccccC
Confidence 57899999984 2 2222222 221 32 6886 4569999999999999999977 67776421 112
Q ss_pred CC-ChhhHHHHHHHHHHHHHHh----C-Ccee--EEEeccCchhhhhhccccCCCCCCCCCCCCCCCCCCCCCchHHHHH
Q 014339 69 WL-SPESQEDFGYFADICFKSF----G-DRVK--YWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAA 140 (426)
Q Consensus 69 w~-~~~~~~~f~~ya~~~~~~f----g-~~V~--~w~t~NEP~~~~~~gy~~G~~pPg~~~~~~~~~~~~~~~~~~~~~~ 140 (426)
+. .|+..+.|.++++.+++|+ | +.|. +|.++|||+...+. ..|. .+.|-
T Consensus 124 ~~~pp~~~~~W~~lv~~~~~h~~~RYG~~ev~~W~fEiWNEPd~~~f~-------~~~~--------------~~ey~-- 180 (486)
T PF01229_consen 124 NISPPKDYEKWRDLVRAFARHYIDRYGIEEVSTWYFEIWNEPDLKDFW-------WDGT--------------PEEYF-- 180 (486)
T ss_dssp E-S-BS-HHHHHHHHHHHHHHHHHHHHHHHHTTSEEEESS-TTSTTTS-------GGG---------------HHHHH--
T ss_pred CcCCcccHHHHHHHHHHHHHHHHhhcCCccccceeEEeCcCCCccccc-------CCCC--------------HHHHH--
Confidence 22 3566788888777766655 4 2355 67999999963221 1111 11122
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCcEEEEecCceeecCCCCHHHHHHHHHHHHHhccccccchhcCCCcHHHHHHHhhcC
Q 014339 141 HNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISSSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTL 220 (426)
Q Consensus 141 h~~l~Aha~a~~~~~~~~~~~~~~~iGi~~~~~~~~p~~~~~~d~~aa~~~~~~~~~~~~d~~~~G~yp~~~~~~l~~~l 220 (426)
.+..+. ++++|+ ..|..+||=- .+ +.... + - ...| .+++..+
T Consensus 181 -~ly~~~---~~~iK~---~~p~~~vGGp----~~-~~~~~-~---~---~~~~------------------l~~~~~~- 222 (486)
T PF01229_consen 181 -ELYDAT---ARAIKA---VDPELKVGGP----AF-AWAYD-E---W---CEDF------------------LEFCKGN- 222 (486)
T ss_dssp -HHHHHH---HHHHHH---H-TTSEEEEE----EE-ETT-T-H---H---HHHH------------------HHHHHHC-
T ss_pred -HHHHHH---HHHHHH---hCCCCcccCc----cc-cccHH-H---H---HHHH------------------HHHHhcC-
Confidence 333333 445555 3789999733 01 00000 0 0 0111 1111111
Q ss_pred CCCChHHHHhhcCCCcEEEcccCCcceeeccccCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCcccChHHHHHHH
Q 014339 221 PKFSSRDKEKLKQGLDFIGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKII 300 (426)
Q Consensus 221 p~~t~~d~~~lk~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~w~~i~P~gl~~~L 300 (426)
.-.+|||.++.|......... +.... . .. .-..+.| .+..+.
T Consensus 223 -----------~~~~DfiS~H~y~~~~~~~~~-------------~~~~~--------~---~~--~~~~~~~-~~~~~~ 264 (486)
T PF01229_consen 223 -----------NCPLDFISFHSYGTDSAEDIN-------------ENMYE--------R---IE--DSRRLFP-ELKETR 264 (486)
T ss_dssp -----------T---SEEEEEEE-BESESE-S-------------S-EEE--------E---B----HHHHHH-HHHHHH
T ss_pred -----------CCCCCEEEEEecccccccccc-------------hhHHh--------h---hh--hHHHHHH-HHHHHH
Confidence 125699999999864321100 00000 0 00 0001111 233333
Q ss_pred HHHHH-HcCCCCEEEeecCCcCCCCCCCCCCCccCcHhHHHHHHHHHHHHHHHHH-cCCCEEEEEeecCCcccccCC---
Q 014339 301 KYIKE-RYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVR-DGADVRGYFVWSLLDSFEWTY--- 375 (426)
Q Consensus 301 ~~~~~-rY~~~PI~ITENG~~~~~~~~~~~~~~v~D~~Ri~yl~~~l~~v~~Ai~-dGv~V~GY~~WSl~Dn~EW~~--- 375 (426)
+.+.+ .+++.|+++||-+..... ...++|+. |-..++.. ..++ +|..+.++.+|++.|.||=..
T Consensus 265 ~~~~~e~~p~~~~~~tE~n~~~~~------~~~~~dt~---~~aA~i~k--~lL~~~~~~l~~~sywt~sD~Fee~~~~~ 333 (486)
T PF01229_consen 265 PIINDEADPNLPLYITEWNASISP------RNPQHDTC---FKAAYIAK--NLLSNDGAFLDSFSYWTFSDRFEENGTPR 333 (486)
T ss_dssp HHHHTSSSTT--EEEEEEES-SST------T-GGGGSH---HHHHHHHH---HHHHGGGT-SEEEES-SBS---TTSS-S
T ss_pred HHHhhccCCCCceeecccccccCC------Ccchhccc---cchhhHHH--HHHHhhhhhhhhhhccchhhhhhccCCCC
Confidence 33332 345678999997665432 12345543 44444322 1233 566777789999999998432
Q ss_pred -CCcceeeeEEecCCCCcccccchHHHHHHH
Q 014339 376 -GYTARFGLHHVDFATLKRTPKLSATWYKHF 405 (426)
Q Consensus 376 -Gy~~rfGL~~VD~~~~~R~pK~S~~~y~~i 405 (426)
-+..-|||+..+ .++|+|++.|+-+
T Consensus 334 ~pf~ggfGLlt~~-----gI~KPa~~A~~~L 359 (486)
T PF01229_consen 334 KPFHGGFGLLTKL-----GIPKPAYYAFQLL 359 (486)
T ss_dssp SSSSS-S-SEECC-----CEE-HHHHHHHHH
T ss_pred Cceecchhhhhcc-----CCCchHHHHHHHH
Confidence 133469999877 6799999888754
No 20
>PRK10150 beta-D-glucuronidase; Provisional
Probab=98.87 E-value=4.5e-07 Score=98.06 Aligned_cols=102 Identities=23% Similarity=0.314 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHcCCCCEEEeecCCcCCCCCCCCCCCccCcHhHHHHHHHHHHHHHHHHHcCCCEEEEEeecCCccc-c--
Q 014339 296 MWKIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADVRGYFVWSLLDSF-E-- 372 (426)
Q Consensus 296 l~~~L~~~~~rY~~~PI~ITENG~~~~~~~~~~~~~~v~D~~Ri~yl~~~l~~v~~Ai~dGv~V~GY~~WSl~Dn~-E-- 372 (426)
|...+...++.| ++|++|||.|.+............-....+..|++.|+..+ ++--.|.|-|+|.+.|-. +
T Consensus 489 ~~~~~~~~~~~~-~kP~~isEyg~~~~~~~h~~~~~~~~ee~q~~~~~~~~~~~----~~~p~~~G~~iW~~~D~~~~~g 563 (604)
T PRK10150 489 LEKELLAWQEKL-HKPIIITEYGADTLAGLHSMYDDMWSEEYQCAFLDMYHRVF----DRVPAVVGEQVWNFADFATSQG 563 (604)
T ss_pred HHHHHHHHHHhc-CCCEEEEccCCccccccccCCCCCCCHHHHHHHHHHHHHHH----hcCCceEEEEEEeeeccCCCCC
Confidence 445556666667 69999999996543211111112223566777777777644 555789999999999932 1
Q ss_pred -cCCCCcceeeeEEecCCCCcccccchHHHHHHHHHh
Q 014339 373 -WTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIAK 408 (426)
Q Consensus 373 -W~~Gy~~rfGL~~VD~~~~~R~pK~S~~~y~~ii~~ 408 (426)
|..| ....||+.-| |.||++++.||++-+.
T Consensus 564 ~~~~~-g~~~Gl~~~d-----r~~k~~~~~~k~~~~~ 594 (604)
T PRK10150 564 ILRVG-GNKKGIFTRD-----RQPKSAAFLLKKRWTG 594 (604)
T ss_pred CcccC-CCcceeEcCC-----CCChHHHHHHHHHhhc
Confidence 2211 1377998555 7799999999998753
No 21
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A.
Probab=98.65 E-value=4.8e-08 Score=99.46 Aligned_cols=99 Identities=27% Similarity=0.434 Sum_probs=78.0
Q ss_pred CcccCCCeEEe-ccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhh-------------
Q 014339 1 MESLGVNSYRF-SISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKY------------- 66 (426)
Q Consensus 1 mk~lG~~~yRf-si~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~------------- 66 (426)
||++|+|+.|+ .++|++|+|+. |++|.+. +|++|+.+.++||+.++.+.....|.||.+++
T Consensus 19 m~~~G~n~vri~~~~W~~lEP~e--G~ydF~~---lD~~l~~a~~~Gi~viL~~~~~~~P~Wl~~~~Pe~~~~~~~g~~~ 93 (374)
T PF02449_consen 19 MKEAGFNTVRIGEFSWSWLEPEE--GQYDFSW---LDRVLDLAAKHGIKVILGTPTAAPPAWLYDKYPEILPVDADGRRR 93 (374)
T ss_dssp HHHHT-SEEEE-CCEHHHH-SBT--TB---HH---HHHHHHHHHCTT-EEEEEECTTTS-HHHHCCSGCCC-B-TTTSBE
T ss_pred HHHcCCCEEEEEEechhhccCCC--CeeecHH---HHHHHHHHHhccCeEEEEecccccccchhhhcccccccCCCCCcC
Confidence 68999999995 78999999998 9999974 66999999999999999999889999997531
Q ss_pred --CC-----CCChhhHHHHHHHHHHHHHHhCCc--eeEEEeccCchh
Q 014339 67 --GA-----WLSPESQEDFGYFADICFKSFGDR--VKYWFTINEPNM 104 (426)
Q Consensus 67 --gg-----w~~~~~~~~f~~ya~~~~~~fg~~--V~~w~t~NEP~~ 104 (426)
|+ ..+|...+.+.++++.++++|++. |--|.+-|||..
T Consensus 94 ~~g~~~~~~~~~p~yr~~~~~~~~~l~~~y~~~p~vi~~~i~NE~~~ 140 (374)
T PF02449_consen 94 GFGSRQHYCPNSPAYREYARRFIRALAERYGDHPAVIGWQIDNEPGY 140 (374)
T ss_dssp ECCCSTT-HCCHHHHHHHHHHHHHHHHHHHTTTTTEEEEEECCSTTC
T ss_pred ccCCccccchhHHHHHHHHHHHHHHHHhhccccceEEEEEeccccCc
Confidence 11 224677888899999999999975 889999999864
No 22
>PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins.
Probab=98.00 E-value=0.00018 Score=68.87 Aligned_cols=66 Identities=20% Similarity=0.255 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHcCCCCEEEeecCCcCCCCCCCCCCCccCcHhHHHHHHHHHHHHHHHHHcCCCEEEEEeecCCcccc
Q 014339 295 GMWKIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADVRGYFVWSLLDSFE 372 (426)
Q Consensus 295 gl~~~L~~~~~rY~~~PI~ITENG~~~~~~~~~~~~~~v~D~~Ri~yl~~~l~~v~~Ai~dGv~V~GY~~WSl~Dn~E 372 (426)
++...|..++++|+ +||+|||.|+..... .-.+....+|+++-+..+ +.--.|.+|++.+.++..+
T Consensus 152 ~~~~~i~~~~~~~~-kPIWITEf~~~~~~~-------~~~~~~~~~fl~~~~~~l----d~~~~VeryawF~~~~~~~ 217 (239)
T PF11790_consen 152 DFKDYIDDLHNRYG-KPIWITEFGCWNGGS-------QGSDEQQASFLRQALPWL----DSQPYVERYAWFGFMNDGS 217 (239)
T ss_pred HHHHHHHHHHHHhC-CCEEEEeecccCCCC-------CCCHHHHHHHHHHHHHHH----hcCCCeeEEEecccccccC
Confidence 57888999999997 999999999865221 224566777766666555 6668999999999554444
No 23
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism]
Probab=97.66 E-value=0.012 Score=57.09 Aligned_cols=263 Identities=16% Similarity=0.243 Sum_probs=145.6
Q ss_pred CcccCCCeEEeccccccccccCCC------CCCChHHHHHHHHHHHHHHHcCCeEEEEecc---CCCchhHHHhhCCCCC
Q 014339 1 MESLGVNSYRFSISWARILPKGRF------GDVNSEGINHYNKLIDALLLKGIQPFVTLTQ---FDSPQEIEDKYGAWLS 71 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~~------g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H---~dlP~~l~~~~ggw~~ 71 (426)
||+-|+|..|+-| | .-|.... |.=|- +---++-++.+.+||+.++.+|. |.=|.. |++.-.|.+
T Consensus 72 LK~~GvNyvRlRv-w--ndP~dsngn~yggGnnD~---~k~ieiakRAk~~GmKVl~dFHYSDfwaDPak-Q~kPkaW~~ 144 (403)
T COG3867 72 LKNHGVNYVRLRV-W--NDPYDSNGNGYGGGNNDL---KKAIEIAKRAKNLGMKVLLDFHYSDFWADPAK-QKKPKAWEN 144 (403)
T ss_pred HHHcCcCeEEEEE-e--cCCccCCCCccCCCcchH---HHHHHHHHHHHhcCcEEEeeccchhhccChhh-cCCcHHhhh
Confidence 5788999999843 2 1232211 22232 33346778899999999999873 555654 334457765
Q ss_pred ---hhhHHHHHHHHHHHHHHh---CCceeEEEeccCchhhhhhccccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHH
Q 014339 72 ---PESQEDFGYFADICFKSF---GDRVKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLIL 145 (426)
Q Consensus 72 ---~~~~~~f~~ya~~~~~~f---g~~V~~w~t~NEP~~~~~~gy~~G~~pPg~~~~~~~~~~~~~~~~~~~~~~h~~l~ 145 (426)
++...+.-+|.+.+...+ |-....--.=||-| .|+ .||-|... -+.-+-.++.
T Consensus 145 l~fe~lk~avy~yTk~~l~~m~~eGi~pdmVQVGNEtn----~gf---lwp~Ge~~--------------~f~k~a~L~n 203 (403)
T COG3867 145 LNFEQLKKAVYSYTKYVLTTMKKEGILPDMVQVGNETN----GGF---LWPDGEGR--------------NFDKMAALLN 203 (403)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHcCCCccceEeccccC----Cce---eccCCCCc--------------ChHHHHHHHH
Confidence 333344556666666555 54566667788866 233 26655421 2333345555
Q ss_pred HHHHHHHHHHHhhccCCCCcEEEEecCceeecCCCCHHHHHHHHHHHHHhccccccchhcCCCcHHHHHHHhhcCCCCCh
Q 014339 146 SHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISSSTADKLAAERAQSFYMNWFLDPIIYGKYPAEMMNIVGSTLPKFSS 225 (426)
Q Consensus 146 Aha~a~~~~~~~~~~~~~~~iGi~~~~~~~~p~~~~~~d~~aa~~~~~~~~~~~~d~~~~G~yp~~~~~~l~~~lp~~t~ 225 (426)
|-.+ ++|+ ..|.-+| +++.. .|.+++ ...|+.|-+.
T Consensus 204 ~g~~---avre---v~p~ikv--~lHla--~g~~n~-------------~y~~~fd~lt--------------------- 239 (403)
T COG3867 204 AGIR---AVRE---VSPTIKV--ALHLA--EGENNS-------------LYRWIFDELT--------------------- 239 (403)
T ss_pred HHhh---hhhh---cCCCceE--EEEec--CCCCCc-------------hhhHHHHHHH---------------------
Confidence 5444 4555 4676666 44432 233322 1123333322
Q ss_pred HHHHhhcCCCcEEEcccCCcceeeccccCCCCCCCCCCCCCCcccccCccCCCCCCCCCCCCCcccChHHHHHHHHHHHH
Q 014339 226 RDKEKLKQGLDFIGINHYTSTYVQDCIFSACKPGPGASKTEGFCLQNSQKHGVPLGEPTTLFWLNVYPQGMWKIIKYIKE 305 (426)
Q Consensus 226 ~d~~~lk~~~DfiGiNyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~w~~i~P~gl~~~L~~~~~ 305 (426)
.-.-.+|.||++||+. +. + .-..|...|..+.+
T Consensus 240 ----k~nvdfDVig~SyYpy--Wh-----------------g------------------------tl~nL~~nl~dia~ 272 (403)
T COG3867 240 ----KRNVDFDVIGSSYYPY--WH-----------------G------------------------TLNNLTTNLNDIAS 272 (403)
T ss_pred ----HcCCCceEEeeecccc--cc-----------------C------------------------cHHHHHhHHHHHHH
Confidence 1233679999999963 10 0 01247778999999
Q ss_pred HcCCCCEEEeecCCcCC--C--CCCC--CCCC-----ccCcHhHHHHHHHHHHHHHHHHHcCCCEEEEEeecCCcccc-c
Q 014339 306 RYKNTPMFITENGYGEI--C--MPNS--STED-----LLNDVKRVEYMASYLDALITAVRDGADVRGYFVWSLLDSFE-W 373 (426)
Q Consensus 306 rY~~~PI~ITENG~~~~--~--~~~~--~~~~-----~v~D~~Ri~yl~~~l~~v~~Ai~dGv~V~GY~~WSl~Dn~E-W 373 (426)
||+ +.+||.|.+.+-- + .-.+ +..+ .+.=+-+.-++++-++.|..- -+.+=.|.|+|---=+-. -
T Consensus 273 rY~-K~VmV~Etay~yTlEdgDg~~Nt~~~~~~t~~ypitVQGQat~vrDvie~V~nv--p~~~GlGvFYWEp~wipv~~ 349 (403)
T COG3867 273 RYH-KDVMVVETAYTYTLEDGDGHENTFPSSEQTGGYPITVQGQATFVRDVIEAVKNV--PKSNGLGVFYWEPAWIPVVL 349 (403)
T ss_pred Hhc-CeEEEEEecceeeeccCCCCCCcCCcccccCCCceEEechhhHHHHHHHHHHhC--CCCCceEEEEecccceeccC
Confidence 995 7899999987311 1 0000 0011 111245677888877766221 344568999996542222 2
Q ss_pred CCCCcceeeeEE
Q 014339 374 TYGYTARFGLHH 385 (426)
Q Consensus 374 ~~Gy~~rfGL~~ 385 (426)
.+||...||.-|
T Consensus 350 g~gwat~~~~~y 361 (403)
T COG3867 350 GSGWATSYAAKY 361 (403)
T ss_pred CCccccchhhcc
Confidence 345555555554
No 24
>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. Beta-galactosidase from E. coli has a TIM-barrel-like core surrounded by four other largely beta domains [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3CMG_A 3FN9_C 1YQ2_A 3K4D_B 3LPG_B 3LPF_A 3K4A_B 3K46_B 3GM8_A 3DEC_A ....
Probab=97.23 E-value=0.0042 Score=61.24 Aligned_cols=99 Identities=22% Similarity=0.204 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHcCCCCEEEeecCCcCCCCCCCCCCCccCcHhHH---------HHHHHHHHHHHHHHH-cCCCEEEEEe
Q 014339 295 GMWKIIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRV---------EYMASYLDALITAVR-DGADVRGYFV 364 (426)
Q Consensus 295 gl~~~L~~~~~rY~~~PI~ITENG~~~~~~~~~~~~~~v~D~~Ri---------~yl~~~l~~v~~Ai~-dGv~V~GY~~ 364 (426)
.+...+...+.. .+.|+++||.|....... +...+..+. .++.++.. .++. ..-.+.|-++
T Consensus 185 ~~~~~~~~~~~~-~~kP~i~sEyg~~~~~~~-----g~~~~~~~~~~~~~~~q~~~~~~~~~---~~~~~~~~~~~g~~~ 255 (298)
T PF02836_consen 185 DFEKYLEDWYKY-PDKPIIISEYGADAYNSK-----GGDSEYWQLWSWYEEYQGAFIWDYQD---QAIQRRDPYVAGEFY 255 (298)
T ss_dssp HHHHHHHHHHHH-CTS-EEEEEESEBBSST------TTHHHHHHHHHHCTTEEEEEESHSBH---HHEEEEETTESEEEE
T ss_pred HHHHHHHhcccc-CCCCeEehhccccccccC-----CCccccccccccCchhhhhhhhhhhh---hhhccccccccceee
Confidence 355555544433 468999999998654321 111111111 11122222 2222 3455789999
Q ss_pred ecCCcccc-cCCCCcceeeeEEecCCCCcccccchHHHHHHHHH
Q 014339 365 WSLLDSFE-WTYGYTARFGLHHVDFATLKRTPKLSATWYKHFIA 407 (426)
Q Consensus 365 WSl~Dn~E-W~~Gy~~rfGL~~VD~~~~~R~pK~S~~~y~~ii~ 407 (426)
|++.|-.. -..+...-.||+.-| |+||++++.||++-+
T Consensus 256 w~~~Df~~~~~~~~~~~nGlv~~d-----R~pK~~~~~~k~~~~ 294 (298)
T PF02836_consen 256 WTGFDFGTEPTDYEFEYNGLVDYD-----RRPKPAYYEYKSQWS 294 (298)
T ss_dssp EETTTTSCSSBTGGGGSBESBETT-----SEBBHHHHHHHHHHH
T ss_pred ecceEeccCCCCCeeeeccEECCc-----CCcCHHHHHHHHHhh
Confidence 99998554 111111234999665 789999999998754
No 25
>COG2730 BglC Endoglucanase [Carbohydrate transport and metabolism]
Probab=96.57 E-value=0.0064 Score=62.80 Aligned_cols=104 Identities=17% Similarity=0.154 Sum_probs=74.9
Q ss_pred CcccCCCeEEeccccccccccC--CCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhh---CCCC-Chhh
Q 014339 1 MESLGVNSYRFSISWARILPKG--RFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKY---GAWL-SPES 74 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~--~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~---ggw~-~~~~ 74 (426)
||+.|+|+.|.-|.|-.+.+.+ .+...+..-+.+-+++|+..++.||..++.||+..-.+--++.- +.+. ..+.
T Consensus 82 ik~~G~n~VRiPi~~~~~~~~~~~~p~~~~~~~~~~ld~~I~~a~~~gi~V~iD~H~~~~~~~~~~~s~~~~~~~~~~~~ 161 (407)
T COG2730 82 IKSAGFNAVRIPIGYWALQATDGDNPYLIGLTQLKILDEAINWAKKLGIYVLIDLHGYPGGNNGHEHSGYTSDYKEENEN 161 (407)
T ss_pred HHHcCCcEEEcccchhhhhccCCCCCCeecchHHHHHHHHHHHHHhcCeeEEEEecccCCCCCCcCcccccccccccchh
Confidence 5899999999999966665542 11223233444888999999999999999999976333322221 1222 3667
Q ss_pred HHHHHHHHHHHHHHhCCc--eeEEEeccCchh
Q 014339 75 QEDFGYFADICFKSFGDR--VKYWFTINEPNM 104 (426)
Q Consensus 75 ~~~f~~ya~~~~~~fg~~--V~~w~t~NEP~~ 104 (426)
++++.+--++++.+|++. |--..++|||+.
T Consensus 162 ~~~~~~~w~~ia~~f~~~~~VIg~~~~NEP~~ 193 (407)
T COG2730 162 VEATIDIWKFIANRFKNYDTVIGFELINEPNG 193 (407)
T ss_pred HHHHHHHHHHHHHhccCCCceeeeeeecCCcc
Confidence 799999999999999874 444679999984
No 26
>PF14587 Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; PDB: 3CLW_B.
Probab=96.23 E-value=0.014 Score=58.96 Aligned_cols=100 Identities=21% Similarity=0.375 Sum_probs=56.7
Q ss_pred cccCCCeEEeccc---------------ccccc--ccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHH
Q 014339 2 ESLGVNSYRFSIS---------------WARIL--PKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIED 64 (426)
Q Consensus 2 k~lG~~~yRfsi~---------------W~RI~--P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~ 64 (426)
+-||++.+||.|- |.|.+ +... |.+|+.+=+-=+.++++++++|+.-++ ++=+.-|.|+-.
T Consensus 57 ~GlGLSI~RyNIGgGs~~~~d~~~i~~~~rr~e~f~~~d-g~yDW~~D~gQrwfL~~Ak~rGV~~f~-aFSNSPP~~MT~ 134 (384)
T PF14587_consen 57 KGLGLSIWRYNIGGGSAEQGDSSGIRDPWRRAESFLPAD-GSYDWDADAGQRWFLKAAKERGVNIFE-AFSNSPPWWMTK 134 (384)
T ss_dssp -S---S-EEEE---STTTTTTSS--SSSTT----SB-TT-S-B-TTSSHHHHHHHHHHHHTT---EE-EE-SSS-GGGSS
T ss_pred CCceeeeeeeccccCCcccccCccCCCcccCCccccCCC-CCcCCCCCHHHHHHHHHHHHcCCCeEE-EeecCCCHHHhc
Confidence 3589999999773 55543 2222 777776655667799999999999765 777888888753
Q ss_pred h---hCC-----CCChhhHHHHHHHHHHHHHHh---CCceeEEEeccCch
Q 014339 65 K---YGA-----WLSPESQEDFGYFADICFKSF---GDRVKYWFTINEPN 103 (426)
Q Consensus 65 ~---~gg-----w~~~~~~~~f~~ya~~~~~~f---g~~V~~w~t~NEP~ 103 (426)
- .|+ =+.++..+.|++|-..|+++| |=.|++-.++|||+
T Consensus 135 NG~~~g~~~~~~NLk~d~y~~FA~YLa~Vv~~~~~~GI~f~~IsP~NEP~ 184 (384)
T PF14587_consen 135 NGSASGGDDGSDNLKPDNYDAFADYLADVVKHYKKWGINFDYISPFNEPQ 184 (384)
T ss_dssp SSSSB-S-SSS-SS-TT-HHHHHHHHHHHHHHHHCTT--EEEEE--S-TT
T ss_pred CCCCCCCCccccccChhHHHHHHHHHHHHHHHHHhcCCccceeCCcCCCC
Confidence 1 111 256888999999999999988 44799999999998
No 27
>COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism]
Probab=96.20 E-value=0.0069 Score=65.65 Aligned_cols=110 Identities=18% Similarity=0.282 Sum_probs=78.9
Q ss_pred CcccCCCeEEe-ccccccccccCCCCCCChHHHHHHHHH-HHHHHHcCCeEEEEe-ccCCCchhHHHh------------
Q 014339 1 MESLGVNSYRF-SISWARILPKGRFGDVNSEGINHYNKL-IDALLLKGIQPFVTL-TQFDSPQEIEDK------------ 65 (426)
Q Consensus 1 mk~lG~~~yRf-si~W~RI~P~~~~g~~n~~gl~~Y~~~-i~~l~~~gi~P~vtL-~H~dlP~~l~~~------------ 65 (426)
||++|+|+.|. =++|++++|+. |++|.. +-|.. ++.+.+.||..++.= =-...|.|+..+
T Consensus 39 mk~~G~N~V~ig~faW~~~eP~e--G~fdf~---~~D~~~l~~a~~~Gl~vil~t~P~g~~P~Wl~~~~PeiL~~~~~~~ 113 (673)
T COG1874 39 MKALGLNTVRIGYFAWNLHEPEE--GKFDFT---WLDEIFLERAYKAGLYVILRTGPTGAPPAWLAKKYPEILAVDENGR 113 (673)
T ss_pred HHHhCCCeeEeeeEEeeccCccc--cccCcc---cchHHHHHHHHhcCceEEEecCCCCCCchHHhcCChhheEecCCCc
Confidence 79999999999 89999999997 999998 55677 999999999988755 335678887653
Q ss_pred ---hCCCCChhhHHH-HHHHHHH----HHHH-hCC--ceeEEEeccCchh-hhhhccccCCC
Q 014339 66 ---YGAWLSPESQED-FGYFADI----CFKS-FGD--RVKYWFTINEPNM-QVTLSYRLGCH 115 (426)
Q Consensus 66 ---~ggw~~~~~~~~-f~~ya~~----~~~~-fg~--~V~~w~t~NEP~~-~~~~gy~~G~~ 115 (426)
.|+|.+-+.... |..|++. +.+| +|+ .|--|-+=||=.- .|++.|....|
T Consensus 114 ~~~~g~r~~~~~~~~~Yr~~~~~i~~~irer~~~~~~~v~~w~~dneY~~~~~~~~~~~~~f 175 (673)
T COG1874 114 VRSDGARENICPVSPVYREYLDRILQQIRERLYGNGPAVITWQNDNEYGGHPCYCDYCQAAF 175 (673)
T ss_pred ccCCCcccccccccHHHHHHHHHHHHHHHHHHhccCCceeEEEccCccCCccccccccHHHH
Confidence 367755444333 6666666 6777 665 4888888886333 34444443333
No 28
>PF01373 Glyco_hydro_14: Glycosyl hydrolase family 14; InterPro: IPR001554 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 14 GH14 from CAZY comprises enzymes with only one known activity; beta-amylase (3.2.1.2 from EC). A Glu residue has been proposed as a catalytic residue, but it is not known if it is the nucleophile or the proton donor. Beta-amylase [, ] is an enzyme that hydrolyses 1,4-alpha-glucosidic linkages in starch-type polysaccharide substrates so as to remove successive maltose units from the non-reducing ends of the chains. Beta-amylase is present in certain bacteria as well as in plants. Three highly conserved sequence regions are found in all known beta-amylases. The first of these regions is located in the N-terminal section of the enzymes and contains an aspartate which is known [] to be involved in the catalytic mechanism. The second, located in a more central location, is centred around a glutamate which is also involved [] in the catalytic mechanism. The 3D structure of a complex of soybean beta-amylase with an inhibitor (alpha-cyclodextrin) has been determined to 3.0A resolution by X-ray diffraction []. The enzyme folds into large and small domains: the large domain has a (beta alpha)8 super-secondary structural core, while the smaller is formed from two long loops extending from the beta-3 and beta-4 strands of the (beta alpha)8 fold []. The interface of the two domains, together with shorter loops from the (beta alpha)8 core, form a deep cleft, in which the inhibitor binds []. Two maltose molecules also bind in the cleft, one sharing a binding site with alpha-cyclodextrin, and the other sitting more deeply in the cleft [].; GO: 0016161 beta-amylase activity, 0000272 polysaccharide catabolic process; PDB: 1FA2_A 2DQX_A 1WDP_A 1UKP_C 1BYC_A 1BYA_A 1Q6C_A 1V3I_A 1BTC_A 1BYB_A ....
Probab=95.67 E-value=0.006 Score=61.95 Aligned_cols=96 Identities=19% Similarity=0.279 Sum_probs=72.7
Q ss_pred CcccCCCeEEeccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEe-cc-----------CCCchhHHHh---
Q 014339 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTL-TQ-----------FDSPQEIEDK--- 65 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL-~H-----------~dlP~~l~~~--- 65 (426)
||++|+...-..+=|.-+++++. +++|++ .|+++++-+++.|++..|.| +| .-||.|+.++
T Consensus 25 LK~~GV~GVmvdvWWGiVE~~~p-~~ydWs---~Y~~l~~~vr~~GLk~~~vmsfH~cGgNvgD~~~IpLP~Wv~~~~~~ 100 (402)
T PF01373_consen 25 LKSAGVDGVMVDVWWGIVEGEGP-QQYDWS---GYRELFEMVRDAGLKLQVVMSFHQCGGNVGDDCNIPLPSWVWEIGKK 100 (402)
T ss_dssp HHHTTEEEEEEEEEHHHHTGSST-TB---H---HHHHHHHHHHHTT-EEEEEEE-S-BSSSTTSSSEB-S-HHHHHHHHH
T ss_pred HHHcCCcEEEEEeEeeeeccCCC-CccCcH---HHHHHHHHHHHcCCeEEEEEeeecCCCCCCCccCCcCCHHHHhcccc
Confidence 58899999999999999999975 999997 69999999999999998877 33 4689998642
Q ss_pred --------hC--------CCCChhhHHHHHHHHHHHHHHhCCceeEEEeccCch
Q 014339 66 --------YG--------AWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPN 103 (426)
Q Consensus 66 --------~g--------gw~~~~~~~~f~~ya~~~~~~fg~~V~~w~t~NEP~ 103 (426)
.| -|+...+++.|.+|-+-..++|.+.. -||-|..
T Consensus 101 ~di~ytd~~G~rn~E~lSp~~~grt~~~Y~dfm~sF~~~f~~~~---~~I~~I~ 151 (402)
T PF01373_consen 101 DDIFYTDRSGNRNKEYLSPVLDGRTLQCYSDFMRSFRDNFSDYL---STITEIQ 151 (402)
T ss_dssp SGGEEE-TTS-EEEEEE-CTBTTBCHHHHHHHHHHHHHHCHHHH---TGEEEEE
T ss_pred CCcEEECCCCCcCcceeecccCCchHHHHHHHHHHHHHHHHHHH---hhheEEE
Confidence 23 35565669999999999999997765 5666654
No 29
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B ....
Probab=95.12 E-value=0.015 Score=57.98 Aligned_cols=88 Identities=17% Similarity=0.217 Sum_probs=57.2
Q ss_pred CcccCCCeEEeccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEec--------cCCCchhHHHhhCCCC--
Q 014339 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLT--------QFDSPQEIEDKYGAWL-- 70 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~--------H~dlP~~l~~~~ggw~-- 70 (426)
||++|+|+.-.-|.|.--+|+. |++|.+|..=-+++|+.|+++||-.++-.= .-++|.||..+.+..+
T Consensus 33 ~ka~G~n~v~~yv~W~~he~~~--g~~df~g~~dl~~f~~~a~~~gl~vilrpGpyi~aE~~~gG~P~Wl~~~~~~~~R~ 110 (319)
T PF01301_consen 33 MKAAGLNTVSTYVPWNLHEPEE--GQFDFTGNRDLDRFLDLAQENGLYVILRPGPYICAEWDNGGLPAWLLRKPDIRLRT 110 (319)
T ss_dssp HHHTT-SEEEEE--HHHHSSBT--TB---SGGG-HHHHHHHHHHTT-EEEEEEES---TTBGGGG--GGGGGSTTS-SSS
T ss_pred HHhCCcceEEEeccccccCCCC--CcccccchhhHHHHHHHHHHcCcEEEecccceecccccchhhhhhhhccccccccc
Confidence 6899999999999999999997 999999987778999999999999766421 1259999986533332
Q ss_pred -ChhhHHHHHHHHHHHHHHhC
Q 014339 71 -SPESQEDFGYFADICFKSFG 90 (426)
Q Consensus 71 -~~~~~~~f~~ya~~~~~~fg 90 (426)
++...++..+|.+.+++...
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~ 131 (319)
T PF01301_consen 111 NDPPFLEAVERWYRALAKIIK 131 (319)
T ss_dssp S-HHHHHHHHHHHHHHHHHHG
T ss_pred cchhHHHHHHHHHHHHHHHHH
Confidence 45556666666666665553
No 30
>PLN02803 beta-amylase
Probab=94.97 E-value=0.041 Score=57.47 Aligned_cols=98 Identities=16% Similarity=0.212 Sum_probs=74.7
Q ss_pred CcccCCCeEEeccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccC------------CCchhHHHh---
Q 014339 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQF------------DSPQEIEDK--- 65 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~------------dlP~~l~~~--- 65 (426)
||++|+...-..+=|.-+++++. +++|+. .|+++++-+++.|++..+.|.-. -||+|+.+.
T Consensus 116 LK~~GVdGVmvDVWWGiVE~~~p-~~YdWs---gY~~l~~mvr~~GLKlq~vmSFHqCGGNVGD~~~IpLP~WV~e~~~~ 191 (548)
T PLN02803 116 LRSAGVEGVMVDAWWGLVEKDGP-MKYNWE---GYAELVQMVQKHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLEEMSK 191 (548)
T ss_pred HHHcCCCEEEEEeeeeeeccCCC-CcCCcH---HHHHHHHHHHHcCCeEEEEEEecccCCCCCCcccccCCHHHHHhhhc
Confidence 58999999999999999999885 999997 59999999999999887776433 599998652
Q ss_pred --------hCCC----------------CChhhHHHHHHHHHHHHHHhCCceeEEEeccCchh
Q 014339 66 --------YGAW----------------LSPESQEDFGYFADICFKSFGDRVKYWFTINEPNM 104 (426)
Q Consensus 66 --------~ggw----------------~~~~~~~~f~~ya~~~~~~fg~~V~~w~t~NEP~~ 104 (426)
..|- ..+.-++.|.+|-+-.-++|.+... -||.|..|
T Consensus 192 ~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTplq~Y~Dfm~SFr~~F~~~l~--~~I~eI~V 252 (548)
T PLN02803 192 NPDLVYTDRSGRRNPEYISLGCDSLPVLRGRTPIQVYSDYMRSFRERFKDYLG--GVIAEIQV 252 (548)
T ss_pred CCCceEecCCCCcccceeccccccchhccCCCHHHHHHHHHHHHHHHHHHHhc--CceEEEEe
Confidence 0121 2233457788888888888877554 47777543
No 31
>PLN02161 beta-amylase
Probab=94.51 E-value=0.089 Score=54.78 Aligned_cols=97 Identities=14% Similarity=0.168 Sum_probs=74.4
Q ss_pred CcccCCCeEEeccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccC------------CCchhHHHh---
Q 014339 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQF------------DSPQEIEDK--- 65 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~------------dlP~~l~~~--- 65 (426)
||++|+...-..+=|.-+|.++. +++|++ .|+++++-+++.|++-.|.|.-. -||+|+.+.
T Consensus 126 LK~~GVdGVmvDVWWGiVE~~~p-~~YdWs---gY~~l~~mvr~~GLKlq~vmSFHqCGGNvGd~~~IpLP~WV~~~g~~ 201 (531)
T PLN02161 126 LKLAGVHGIAVEVWWGIVERFSP-LEFKWS---LYEELFRLISEAGLKLHVALCFHSNMHLFGGKGGISLPLWIREIGDV 201 (531)
T ss_pred HHHcCCCEEEEEeeeeeeecCCC-CcCCcH---HHHHHHHHHHHcCCeEEEEEEecccCCCCCCccCccCCHHHHhhhcc
Confidence 58899999999999999999886 999997 69999999999999887776433 499998642
Q ss_pred --------hCCCC----------------ChhhHHHHHHHHHHHHHHhCCceeEEEeccCch
Q 014339 66 --------YGAWL----------------SPESQEDFGYFADICFKSFGDRVKYWFTINEPN 103 (426)
Q Consensus 66 --------~ggw~----------------~~~~~~~f~~ya~~~~~~fg~~V~~w~t~NEP~ 103 (426)
..|-. .+.-++.|.+|-+-..++|.+... -||.|..
T Consensus 202 ~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTplq~Y~Dfm~SFr~~F~~~~~--~~I~eI~ 261 (531)
T PLN02161 202 NKDIYYRDKNGFSNNDYLTLGVDQLPLFGGRTAVQCYEDFMLSFSTKFEPYIG--NVIEEIS 261 (531)
T ss_pred CCCceEEcCCCCcccceeeeecccchhcCCCCHHHHHHHHHHHHHHHHHHHhc--CceEEEE
Confidence 01212 233457888888888888877654 4777754
No 32
>PLN00197 beta-amylase; Provisional
Probab=94.40 E-value=0.089 Score=55.24 Aligned_cols=97 Identities=16% Similarity=0.211 Sum_probs=74.5
Q ss_pred CcccCCCeEEeccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccC------------CCchhHHHh---
Q 014339 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQF------------DSPQEIEDK--- 65 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~------------dlP~~l~~~--- 65 (426)
||++|+...-..+=|.-+++++. +++|++ .|+++++-+++.|++..|.|.-. -||+|+.+.
T Consensus 136 LK~~GVdGVmvDvWWGiVE~~~p-~~YdWs---gY~~L~~mvr~~GLKlq~VmSFHqCGGNVGD~~~IpLP~WV~~~g~~ 211 (573)
T PLN00197 136 LKSAGVEGIMMDVWWGLVERESP-GVYNWG---GYNELLEMAKRHGLKVQAVMSFHQCGGNVGDSCTIPLPKWVVEEVDK 211 (573)
T ss_pred HHHcCCCEEEEeeeeeeeccCCC-CcCCcH---HHHHHHHHHHHcCCeEEEEEEecccCCCCCCcccccCCHHHHHhhcc
Confidence 58899999999999999999886 999997 59999999999999888776433 599998652
Q ss_pred --------hCCCC----------------ChhhHHHHHHHHHHHHHHhCCceeEEEeccCch
Q 014339 66 --------YGAWL----------------SPESQEDFGYFADICFKSFGDRVKYWFTINEPN 103 (426)
Q Consensus 66 --------~ggw~----------------~~~~~~~f~~ya~~~~~~fg~~V~~w~t~NEP~ 103 (426)
..|-. .+.-++.|.+|-+-.-++|.+..+ -||.|..
T Consensus 212 dpDifftDr~G~rn~EyLSlg~D~~pvl~GRTpiq~Y~DFM~SFr~~F~~~l~--~~I~eI~ 271 (573)
T PLN00197 212 DPDLAYTDQWGRRNYEYVSLGCDTLPVLKGRTPVQCYADFMRAFRDNFKHLLG--DTIVEIQ 271 (573)
T ss_pred CCCceeecCCCCcccceeccccccccccCCCCHHHHHHHHHHHHHHHHHHHhc--CceeEEE
Confidence 01211 223367888888888888877554 3677754
No 33
>PLN02801 beta-amylase
Probab=94.23 E-value=0.16 Score=52.85 Aligned_cols=98 Identities=14% Similarity=0.235 Sum_probs=73.3
Q ss_pred CcccCCCeEEeccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEec-c-----------CCCchhHHHh---
Q 014339 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLT-Q-----------FDSPQEIEDK--- 65 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~-H-----------~dlP~~l~~~--- 65 (426)
||++|+...-..+=|.-++.++. +++|++ .|+++++-+++.|++-.|.|. | .-||+|+.+.
T Consensus 46 LK~~GVdGVmvDVWWGiVE~~~P-~~YdWs---gY~~l~~mvr~~GLKlq~vmSFHqCGGNVGD~~~IpLP~WV~~~g~~ 121 (517)
T PLN02801 46 LKEAGVDGVMVDVWWGIVESKGP-KQYDWS---AYRSLFELVQSFGLKIQAIMSFHQCGGNVGDAVNIPIPQWVRDVGDS 121 (517)
T ss_pred HHHcCCCEEEEeeeeeeeccCCC-CccCcH---HHHHHHHHHHHcCCeEEEEEEecccCCCCCCcccccCCHHHHHhhcc
Confidence 68999999999999999999875 999997 599999999999998777664 3 2599998752
Q ss_pred --------hCC---------------CC-ChhhHHHHHHHHHHHHHHhCCceeEEEeccCch
Q 014339 66 --------YGA---------------WL-SPESQEDFGYFADICFKSFGDRVKYWFTINEPN 103 (426)
Q Consensus 66 --------~gg---------------w~-~~~~~~~f~~ya~~~~~~fg~~V~~w~t~NEP~ 103 (426)
..| ++ .+.-++.+.+|-+-.-++|.+...- -||.|..
T Consensus 122 ~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTplq~Y~Dfm~SFr~~F~~~l~~-~~I~eI~ 182 (517)
T PLN02801 122 DPDIFYTNRSGNRNKEYLSIGVDNLPLFHGRTAVEMYSDYMKSFRENMADFLEA-GVIIDIE 182 (517)
T ss_pred CCCceeecCCCCcCcceeeeccCcccccCCCCHHHHHHHHHHHHHHHHHHhccC-CeeEEEE
Confidence 012 22 2334688888888888888774321 2555543
No 34
>PLN02705 beta-amylase
Probab=93.39 E-value=0.21 Score=53.09 Aligned_cols=98 Identities=15% Similarity=0.072 Sum_probs=71.7
Q ss_pred CcccCCCeEEeccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccC------------CCchhHHHh---
Q 014339 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQF------------DSPQEIEDK--- 65 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~------------dlP~~l~~~--- 65 (426)
||++|+...-..+=|.-++.++. +++|+. .|+++++-+++.|++..|.|.-. -||+|+.+.
T Consensus 277 LK~aGVdGVmvDVWWGiVE~~~P-~~YdWs---gY~~L~~mvr~~GLKlqvVmSFHqCGGNVGD~~~IPLP~WV~e~g~~ 352 (681)
T PLN02705 277 MKSLNVDGVVVDCWWGIVEGWNP-QKYVWS---GYRELFNIIREFKLKLQVVMAFHEYGGNASGNVMISLPQWVLEIGKD 352 (681)
T ss_pred HHHcCCCEEEEeeeeeEeecCCC-CcCCcH---HHHHHHHHHHHcCCeEEEEEEeeccCCCCCCcccccCCHHHHHhccc
Confidence 68999999999999999999875 999997 59999999999999977776432 599998752
Q ss_pred --------hCCCC----------------ChhhHHHHHHHHHHHHHHhCCceeEEEeccCch
Q 014339 66 --------YGAWL----------------SPESQEDFGYFADICFKSFGDRVKYWFTINEPN 103 (426)
Q Consensus 66 --------~ggw~----------------~~~~~~~f~~ya~~~~~~fg~~V~~w~t~NEP~ 103 (426)
..|-. .+.-++.|.+|.+-.-++|.+...- -||.|..
T Consensus 353 nPDifftDr~G~rn~EyLSlg~D~~pvl~GRTplq~Y~DFM~SFr~~F~~fl~~-g~I~eI~ 413 (681)
T PLN02705 353 NQDIFFTDREGRRNTECLSWSIDKERVLKGRTGIEVYFDFMRSFRSEFDDLFVE-GLITAVE 413 (681)
T ss_pred CCCceeecCCCCcccceeeeecCcccccCCCCHHHHHHHHHHHHHHHHHHhccC-CceeEEE
Confidence 01211 2334577888888777777663211 2455543
No 35
>PLN03059 beta-galactosidase; Provisional
Probab=93.39 E-value=0.21 Score=55.42 Aligned_cols=99 Identities=12% Similarity=0.102 Sum_probs=74.7
Q ss_pred CcccCCCeEEeccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEe--------ccCCCchhHHHhhCCCC--
Q 014339 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTL--------TQFDSPQEIEDKYGAWL-- 70 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL--------~H~dlP~~l~~~~ggw~-- 70 (426)
||.+|+|+.-.=|.|.--+|+. |++|.+|..=-.+.|+.+.+.||-.++-. -.-++|.||... .|-.
T Consensus 68 ~Ka~GlNtV~tYV~Wn~HEp~~--G~~dF~G~~DL~~Fl~la~e~GLyvilRpGPYIcAEw~~GGlP~WL~~~-~~i~~R 144 (840)
T PLN03059 68 AKDGGLDVIQTYVFWNGHEPSP--GNYYFEDRYDLVKFIKVVQAAGLYVHLRIGPYICAEWNFGGFPVWLKYV-PGIEFR 144 (840)
T ss_pred HHHcCCCeEEEEecccccCCCC--CeeeccchHHHHHHHHHHHHcCCEEEecCCcceeeeecCCCCchhhhcC-CCcccc
Confidence 6899999999999999999997 99999998888899999999998877753 234789999854 3432
Q ss_pred --ChhhHHHHHHHHHHHHHHhCCceeEEEeccCch
Q 014339 71 --SPESQEDFGYFADICFKSFGDRVKYWFTINEPN 103 (426)
Q Consensus 71 --~~~~~~~f~~ya~~~~~~fg~~V~~w~t~NEP~ 103 (426)
++.+.++-.+|.+.+++.... .++..+=.=|-
T Consensus 145 s~d~~fl~~v~~~~~~l~~~l~~-~~l~~~~GGPI 178 (840)
T PLN03059 145 TDNGPFKAAMQKFTEKIVDMMKS-EKLFEPQGGPI 178 (840)
T ss_pred cCCHHHHHHHHHHHHHHHHHHhh-cceeecCCCcE
Confidence 566667777777777776632 24444433343
No 36
>PLN02905 beta-amylase
Probab=93.24 E-value=0.22 Score=53.00 Aligned_cols=88 Identities=11% Similarity=0.157 Sum_probs=68.0
Q ss_pred CcccCCCeEEeccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccC------------CCchhHHHh---
Q 014339 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQF------------DSPQEIEDK--- 65 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~------------dlP~~l~~~--- 65 (426)
||++|+...-..+=|.-+++++. +++|+. .|+++++-+++.|++-.|.|.-. -||+|+.+.
T Consensus 295 LK~aGVdGVmvDVWWGiVE~~gP-~~YdWs---gY~~L~~mvr~~GLKlqvVMSFHqCGGNVGD~~~IPLP~WV~e~g~~ 370 (702)
T PLN02905 295 LKSINVDGVKVDCWWGIVEAHAP-QEYNWN---GYKRLFQMVRELKLKLQVVMSFHECGGNVGDDVCIPLPHWVAEIGRS 370 (702)
T ss_pred HHHcCCCEEEEeeeeeeeecCCC-CcCCcH---HHHHHHHHHHHcCCeEEEEEEecccCCCCCCcccccCCHHHHHhhhc
Confidence 58899999999999999999886 999997 59999999999999887776433 599998652
Q ss_pred --------hCCCC----------------ChhhHHHHHHHHHHHHHHhCCc
Q 014339 66 --------YGAWL----------------SPESQEDFGYFADICFKSFGDR 92 (426)
Q Consensus 66 --------~ggw~----------------~~~~~~~f~~ya~~~~~~fg~~ 92 (426)
..|-. .+.-++.|.+|-+-.-++|.+.
T Consensus 371 nPDifftDrsG~rn~EyLSlg~D~~pvl~GRTplq~Y~DFM~SFr~~F~~f 421 (702)
T PLN02905 371 NPDIFFTDREGRRNPECLSWGIDKERILRGRTALEVYFDYMRSFRVEFDEF 421 (702)
T ss_pred CCCceEecCCCCccCceeeeecccccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 01211 2334577888877777777653
No 37
>PF12891 Glyco_hydro_44: Glycoside hydrolase family 44; InterPro: IPR024745 This is a family of putative bacterial glycoside hydrolases.; PDB: 3IK2_A 3ZQ9_A 2YJQ_B 2YKK_A 2YIH_A 2EEX_A 2EQD_A 2E0P_A 2E4T_A 2EO7_A ....
Probab=91.48 E-value=0.66 Score=44.15 Aligned_cols=115 Identities=20% Similarity=0.255 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHcCCeEEEEeccC--------------CCchhH--H--------------Hhh-CC---CCChh---hH
Q 014339 33 NHYNKLIDALLLKGIQPFVTLTQF--------------DSPQEI--E--------------DKY-GA---WLSPE---SQ 75 (426)
Q Consensus 33 ~~Y~~~i~~l~~~gi~P~vtL~H~--------------dlP~~l--~--------------~~~-gg---w~~~~---~~ 75 (426)
+.++.+|+.-+++|..+|+||==- ..|.|= . .+. ++ ..+|+ ..
T Consensus 24 ~~~~~f~~~~~~~ga~~m~T~pm~G~Vakd~~~~~~~~~fp~~~y~~Q~~~d~~~~~~Gng~~~~~~~~~~~~P~~~~~~ 103 (239)
T PF12891_consen 24 DVADTFIDQNLAAGAYSMMTLPMIGYVAKDANSVSESESFPSWRYGPQQWFDPWNPDCGNGVKPDKTALTSNDPDTPDNP 103 (239)
T ss_dssp HHHHHHHHHHHHTT-EEEEEE--SSEEES-BSEGBGGGTSSSTTEEEBS-EETTEEEEE-SEESTSSS--SSSGGSSSSE
T ss_pred HHHHHHHHHhhhcCcceeEeecccceEecCCCCcccccCCChhhcccccccCcCcCCCCccccCCCCCCCCCCCCCCccH
Confidence 368899999999999999997321 112110 0 000 11 11333 01
Q ss_pred HHHHHHHHHHHHHhCCc-----eeEEEeccCchhhhhhccccCCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHH
Q 014339 76 EDFGYFADICFKSFGDR-----VKYWFTINEPNMQVTLSYRLGCHPPAHCSQPFGNCSQGNSEEEPFIAAHNLILSHATA 150 (426)
Q Consensus 76 ~~f~~ya~~~~~~fg~~-----V~~w~t~NEP~~~~~~gy~~G~~pPg~~~~~~~~~~~~~~~~~~~~~~h~~l~Aha~a 150 (426)
..-.+++..+..+||.. |++|..=|||.+.. +==.-.+|-+ -.+.-+.....+.|+|
T Consensus 104 ~y~~ewV~~l~~~~g~a~~~~gvk~y~lDNEP~LW~--~TH~dVHP~~----------------~t~~El~~r~i~~Aka 165 (239)
T PF12891_consen 104 VYMDEWVNYLVNKYGNASTNGGVKYYSLDNEPDLWH--STHRDVHPEP----------------VTYDELRDRSIEYAKA 165 (239)
T ss_dssp EEHHHHHHHHHHHH--TTSTTS--EEEESS-GGGHH--HHTTTT--S-------------------HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhccccCCCceEEEecCchHhhc--ccccccCCCC----------------CCHHHHHHHHHHHHHH
Confidence 23345577777777765 99999999998543 2111122322 1233344556677777
Q ss_pred HHHHHHhhccCCCCcE-EEEec
Q 014339 151 VDIYRTKYQKDQGGSI-GIILN 171 (426)
Q Consensus 151 ~~~~~~~~~~~~~~~i-Gi~~~ 171 (426)
++.. .|.++| |.+.-
T Consensus 166 iK~~------DP~a~v~GP~~w 181 (239)
T PF12891_consen 166 IKAA------DPDAKVFGPVEW 181 (239)
T ss_dssp HHHH-------TTSEEEEEEE-
T ss_pred HHhh------CCCCeEeechhh
Confidence 6553 788876 66533
No 38
>COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism]
Probab=89.02 E-value=2.7 Score=40.57 Aligned_cols=80 Identities=19% Similarity=0.337 Sum_probs=49.9
Q ss_pred HHHHHHHHHcCC-CCEEEeecCCcCCCCCCCCCCCccCcHhHHHHHHHHHHHHHHHHH-cCCCEEEEEeecCCcccccC-
Q 014339 298 KIIKYIKERYKN-TPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVR-DGADVRGYFVWSLLDSFEWT- 374 (426)
Q Consensus 298 ~~L~~~~~rY~~-~PI~ITENG~~~~~~~~~~~~~~v~D~~Ri~yl~~~l~~v~~Ai~-dGv~V~GY~~WSl~Dn~EW~- 374 (426)
+.|++++.-.+. ++++|||.|++......-.....++ .++.| ++++..|++ .|+++.= .+-+|-. |-
T Consensus 219 ~q~e~vqsa~g~~k~~~v~EtGWPS~G~~~G~a~pS~a--nq~~~----~~~i~~~~~~~G~d~fv---feAFdd~-WK~ 288 (305)
T COG5309 219 EQLERVQSACGTKKTVWVTETGWPSDGRTYGSAVPSVA--NQKIA----VQEILNALRSCGYDVFV---FEAFDDD-WKA 288 (305)
T ss_pred HHHHHHHHhcCCCccEEEeeccCCCCCCccCCcCCChh--HHHHH----HHHHHhhhhccCccEEE---eeecccc-ccC
Confidence 348888888875 8999999999976543222223333 24444 555666665 7888753 3334332 32
Q ss_pred ---CCCcceeeeEEec
Q 014339 375 ---YGYTARFGLHHVD 387 (426)
Q Consensus 375 ---~Gy~~rfGL~~VD 387 (426)
.|-++-||.++-|
T Consensus 289 ~~~y~VEkywGv~~s~ 304 (305)
T COG5309 289 DGSYGVEKYWGVLSSD 304 (305)
T ss_pred ccccchhhceeeeccC
Confidence 3667888888755
No 39
>PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane. It includes Candida albicans (Yeast) pH-regulated protein, which is required for apical growth and plays a role in morphogenesis and Saccharomyces cerevisiae glycolipid anchored surface protein.; PDB: 2W61_A 2W62_A 2W63_A.
Probab=88.16 E-value=7.6 Score=38.52 Aligned_cols=81 Identities=19% Similarity=0.306 Sum_probs=41.2
Q ss_pred CcccCCCeEEeccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHHH
Q 014339 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGY 80 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~ 80 (426)
||+||+|+.|.= -|-|+. =+++-...|-++||=.++.| +.|.---++...|.. =..+.|.+
T Consensus 62 l~~LgiNtIRVY----~vdp~~-----------nHd~CM~~~~~aGIYvi~Dl---~~p~~sI~r~~P~~s-w~~~l~~~ 122 (314)
T PF03198_consen 62 LKELGINTIRVY----SVDPSK-----------NHDECMSAFADAGIYVILDL---NTPNGSINRSDPAPS-WNTDLLDR 122 (314)
T ss_dssp HHHHT-SEEEES-------TTS-------------HHHHHHHHHTT-EEEEES----BTTBS--TTS-------HHHHHH
T ss_pred HHHcCCCEEEEE----EeCCCC-----------CHHHHHHHHHhCCCEEEEec---CCCCccccCCCCcCC-CCHHHHHH
Confidence 689999999972 344543 25677888999999999999 455221112111111 11345666
Q ss_pred HHHHHHHHhCC--ceeEEEeccC
Q 014339 81 FADICFKSFGD--RVKYWFTINE 101 (426)
Q Consensus 81 ya~~~~~~fg~--~V~~w~t~NE 101 (426)
|... ++.|.. -|--...=||
T Consensus 123 ~~~v-id~fa~Y~N~LgFf~GNE 144 (314)
T PF03198_consen 123 YFAV-IDAFAKYDNTLGFFAGNE 144 (314)
T ss_dssp HHHH-HHHHTT-TTEEEEEEEES
T ss_pred HHHH-HHHhccCCceEEEEecce
Confidence 6554 455543 2444455555
No 40
>PF13204 DUF4038: Protein of unknown function (DUF4038); PDB: 3KZS_D.
Probab=87.12 E-value=1.7 Score=42.83 Aligned_cols=72 Identities=15% Similarity=0.227 Sum_probs=46.8
Q ss_pred CCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCC---ChhhHHHHHHHHHHHHHHhCCc-eeEEEeccC
Q 014339 26 DVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWL---SPESQEDFGYFADICFKSFGDR-VKYWFTINE 101 (426)
Q Consensus 26 ~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~---~~~~~~~f~~ya~~~~~~fg~~-V~~w~t~NE 101 (426)
.+|++=.++-+++|+.|.+.||+|.+.+.| +.|.. + |.|- +.-.++.-.+|.+.|++||+.. =-.|+.=||
T Consensus 81 ~~N~~YF~~~d~~i~~a~~~Gi~~~lv~~w-g~~~~---~-~~Wg~~~~~m~~e~~~~Y~~yv~~Ry~~~~NviW~l~gd 155 (289)
T PF13204_consen 81 RPNPAYFDHLDRRIEKANELGIEAALVPFW-GCPYV---P-GTWGFGPNIMPPENAERYGRYVVARYGAYPNVIWILGGD 155 (289)
T ss_dssp T----HHHHHHHHHHHHHHTT-EEEEESS--HHHHH-----------TTSS-HHHHHHHHHHHHHHHTT-SSEEEEEESS
T ss_pred CCCHHHHHHHHHHHHHHHHCCCeEEEEEEE-CCccc---c-ccccccccCCCHHHHHHHHHHHHHHHhcCCCCEEEecCc
Confidence 379998999999999999999999887776 22321 1 4442 2333677789999999999998 477888887
Q ss_pred c
Q 014339 102 P 102 (426)
Q Consensus 102 P 102 (426)
=
T Consensus 156 ~ 156 (289)
T PF13204_consen 156 Y 156 (289)
T ss_dssp S
T ss_pred c
Confidence 4
No 41
>PF00332 Glyco_hydro_17: Glycosyl hydrolases family 17; InterPro: IPR000490 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 17 GH17 from CAZY comprises enzymes with several known activities; endo-1,3-beta-glucosidase (3.2.1.39 from EC); lichenase (3.2.1.73 from EC); exo-1,3-glucanase (3.2.1.58 from EC). Currently these enzymes have only been found in plants and in fungi. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1AQ0_B 1GHR_A 1GHS_B 2CYG_A 3UR8_A 3UR7_B 3EM5_C 3F55_D.
Probab=84.03 E-value=0.98 Score=44.95 Aligned_cols=76 Identities=25% Similarity=0.476 Sum_probs=36.1
Q ss_pred cCCCCEEEeecCCcCCCCCCCCCCCccCcHhHHHHHHHHHHHHHHHHHcCCCE-----EEEEeecCCcccccCCC--Ccc
Q 014339 307 YKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADV-----RGYFVWSLLDSFEWTYG--YTA 379 (426)
Q Consensus 307 Y~~~PI~ITENG~~~~~~~~~~~~~~v~D~~Ri~yl~~~l~~v~~Ai~dGv~V-----~GY~~WSl~Dn~EW~~G--y~~ 379 (426)
++++||+|||+|++...... ..+ ..- +.+.+.+.+.+.+|.+. .-+++.++.|- .|-.| .++
T Consensus 225 ~~~~~vvv~ETGWPs~G~~~----a~~--~nA----~~~~~nl~~~~~~gt~~~~~~~~~~y~F~~FdE-~~K~~~~~E~ 293 (310)
T PF00332_consen 225 FPNVPVVVGETGWPSAGDPG----ATP--ENA----QAYNQNLIKHVLKGTPLRPGNGIDVYIFEAFDE-NWKPGPEVER 293 (310)
T ss_dssp -TT--EEEEEE---SSSSTT----CSH--HHH----HHHHHHHHHHCCGBBSSSBSS---EEES-SB---TTSSSSGGGG
T ss_pred CCCceeEEeccccccCCCCC----CCc--chh----HHHHHHHHHHHhCCCcccCCCCCeEEEEEEecC-cCCCCCcccc
Confidence 45789999999999865310 011 111 34445555555566554 35777888875 45433 689
Q ss_pred eeeeEEecCCCCcccccch
Q 014339 380 RFGLHHVDFATLKRTPKLS 398 (426)
Q Consensus 380 rfGL~~VD~~~~~R~pK~S 398 (426)
.|||++-|. +||=+
T Consensus 294 ~wGlf~~d~-----~~ky~ 307 (310)
T PF00332_consen 294 HWGLFYPDG-----TPKYD 307 (310)
T ss_dssp G--SB-TTS-----SBSS-
T ss_pred eeeeECCCC-----CeecC
Confidence 999999884 46644
No 42
>COG3664 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=79.44 E-value=2.5 Score=43.13 Aligned_cols=98 Identities=17% Similarity=0.174 Sum_probs=68.6
Q ss_pred cccCCCeEEeccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCC-CCC-hhhHHHHH
Q 014339 2 ESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGA-WLS-PESQEDFG 79 (426)
Q Consensus 2 k~lG~~~yRfsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~gg-w~~-~~~~~~f~ 79 (426)
+|+|++-.|+---|.=++-. =-+++ .++++++|.+.+.|+.=+-+.+||+.++-...++-+ =.. ....+.++
T Consensus 15 ~Ei~v~yi~~~~v~h~~~q~---~~~~~---t~~d~i~d~~~~~~~~~ie~~l~~~~l~~~~~~wq~n~~~~~~~~dl~~ 88 (428)
T COG3664 15 DEIQVNYIRRHGVWHVNAQK---LFYPF---TYIDEIIDTLLDLGLDLIELFLIWNNLNTKEHQWQLNVDDPKSVFDLIA 88 (428)
T ss_pred hhhceeeehhcceeeeeecc---ccCCh---HHHHHHHHHHHHhccHHHHHhhcccchhhhhhhcccccCCcHhHHHHHH
Confidence 57899999888888822222 23455 589999999999994444467788887655432212 122 34789999
Q ss_pred HHHHHHHHHhCCc---eeEEEeccCchhh
Q 014339 80 YFADICFKSFGDR---VKYWFTINEPNMQ 105 (426)
Q Consensus 80 ~ya~~~~~~fg~~---V~~w~t~NEP~~~ 105 (426)
.++.-|+.++|-+ +=....+||||..
T Consensus 89 ~fl~h~~~~vg~e~v~kw~f~~~~~pn~~ 117 (428)
T COG3664 89 AFLKHVIRRVGVEFVRKWPFYSPNEPNLL 117 (428)
T ss_pred HHHHHHHHHhChhheeecceeecCCCCcc
Confidence 9999999999954 3345778999864
No 43
>PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed
Probab=76.14 E-value=6.7 Score=45.46 Aligned_cols=85 Identities=22% Similarity=0.263 Sum_probs=54.0
Q ss_pred HHHHHHcCCCCEEEeecCCcCCCCCCCCCCCccCcHhHHHHHHHHHHHHHHHHHcCCCEEEEEeecCCcccccC---C--
Q 014339 301 KYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADVRGYFVWSLLDSFEWT---Y-- 375 (426)
Q Consensus 301 ~~~~~rY~~~PI~ITENG~~~~~~~~~~~~~~v~D~~Ri~yl~~~l~~v~~Ai~dGv~V~GY~~WSl~Dn~EW~---~-- 375 (426)
....+...++|++++|.|.+..... |. ++++. ++++.--.+.|=|+|..+|---.. +
T Consensus 497 ~~~~~~~~~kP~i~~Ey~hamgn~~-----g~---------~~~yw----~~~~~~p~l~GgfiW~~~D~~~~~~~~~G~ 558 (1021)
T PRK10340 497 NEFGEYPHPKPRILCEYAHAMGNGP-----GG---------LTEYQ----NVFYKHDCIQGHYVWEWCDHGIQAQDDNGN 558 (1021)
T ss_pred HHHHhCCCCCcEEEEchHhccCCCC-----CC---------HHHHH----HHHHhCCceeEEeeeecCcccccccCCCCC
Confidence 3333333358999999997654221 11 23333 456777889999999999952211 1
Q ss_pred ---CCccee------------eeEEecCCCCcccccchHHHHHHHHHh
Q 014339 376 ---GYTARF------------GLHHVDFATLKRTPKLSATWYKHFIAK 408 (426)
Q Consensus 376 ---Gy~~rf------------GL~~VD~~~~~R~pK~S~~~y~~ii~~ 408 (426)
+|.--| |||..| |+||++++.||++.+-
T Consensus 559 ~~~~ygGd~g~~p~~~~f~~~Glv~~d-----r~p~p~~~e~k~~~~p 601 (1021)
T PRK10340 559 VWYKYGGDYGDYPNNYNFCIDGLIYPD-----QTPGPGLKEYKQVIAP 601 (1021)
T ss_pred EEEEECCCCCCCCCCcCcccceeECCC-----CCCChhHHHHHHhcce
Confidence 122122 666554 7899999999998774
No 44
>cd04733 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 2. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=73.42 E-value=1e+02 Score=30.79 Aligned_cols=40 Identities=13% Similarity=0.051 Sum_probs=33.3
Q ss_pred ccccc---cCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccC
Q 014339 16 ARILP---KGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQF 56 (426)
Q Consensus 16 ~RI~P---~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~ 56 (426)
++..| ... +-.|.+-+..++++.+.+.++|-..++=|+|-
T Consensus 63 ~~~~~~~~~~~-~~~~d~~i~~~~~l~~~vh~~G~~~~~Ql~h~ 105 (338)
T cd04733 63 HLEEPGIIGNV-VLESGEDLEAFREWAAAAKANGALIWAQLNHP 105 (338)
T ss_pred cccCCCcCCCc-ccCCHHHHHHHHHHHHHHHhcCCEEEEEccCC
Confidence 45555 322 67788899999999999999999999999993
No 45
>PF02055 Glyco_hydro_30: O-Glycosyl hydrolase family 30; InterPro: IPR001139 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 30 GH30 from CAZY comprises enzymes with only one known activity; glucosylceramidase (3.2.1.45 from EC). Family 30 encompasses the mammalian glucosylceramidases. Human acid beta-glucosidase (D-glucosyl-N-acylsphingosine glucohydrolase), cleaves the glucosidic bonds of glucosylceramide and synthetic beta-glucosides []. Any one of over 50 different mutations in the gene of glucocerebrosidase have been found to affect activity of this hydrolase, producing variants of Gaucher disease, the most prevalent lysosomal storage disease [, ].; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0007040 lysosome organization, 0005764 lysosome; PDB: 2VT0_B 1NOF_A 2Y24_A 2WCG_B 2J25_A 3GXM_D 1Y7V_B 2NT0_C 3GXF_C 3GXD_A ....
Probab=69.93 E-value=25 Score=37.40 Aligned_cols=99 Identities=18% Similarity=0.257 Sum_probs=55.5
Q ss_pred HHHHHHHHcCCCCEEEeecCCcCCCCCCCCCCCccCcHhHHHHHHHHHHHHHHHHHcCCCEEEEEeecCC-cc---cccC
Q 014339 299 IIKYIKERYKNTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADVRGYFVWSLL-DS---FEWT 374 (426)
Q Consensus 299 ~L~~~~~rY~~~PI~ITENG~~~~~~~~~~~~~~v~D~~Ri~yl~~~l~~v~~Ai~dGv~V~GY~~WSl~-Dn---~EW~ 374 (426)
.|..++++|+++.|+-||...+...... ...+-.-.|. ..+...+...+..| +.|+..|.|+ |. ..|.
T Consensus 319 ~l~~~h~~~P~k~l~~TE~~~g~~~~~~---~~~~g~w~~~---~~y~~~ii~~lnn~--~~gw~~WNl~LD~~GGP~~~ 390 (496)
T PF02055_consen 319 ALDQVHNKFPDKFLLFTEACCGSWNWDT---SVDLGSWDRA---ERYAHDIIGDLNNW--VSGWIDWNLALDENGGPNWV 390 (496)
T ss_dssp HHHHHHHHSTTSEEEEEEEESS-STTS----SS-TTHHHHH---HHHHHHHHHHHHTT--EEEEEEEESEBETTS---TT
T ss_pred HHHHHHHHCCCcEEEeeccccCCCCccc---ccccccHHHH---HHHHHHHHHHHHhh--ceeeeeeeeecCCCCCCccc
Confidence 5678999999999999999765432100 0011122333 23344455566776 6899999985 21 2244
Q ss_pred CCCcceeeeEEecCCCCcccccchHHHHHHHHH
Q 014339 375 YGYTARFGLHHVDFATLKRTPKLSATWYKHFIA 407 (426)
Q Consensus 375 ~Gy~~rfGL~~VD~~~~~R~pK~S~~~y~~ii~ 407 (426)
.++.. ..+-||.++.+-+..+.++.++++-+
T Consensus 391 ~n~~d--~~iivd~~~~~~~~~p~yY~~gHfSK 421 (496)
T PF02055_consen 391 GNFCD--APIIVDSDTGEFYKQPEYYAMGHFSK 421 (496)
T ss_dssp ---B----SEEEEGGGTEEEE-HHHHHHHHHHT
T ss_pred CCCCC--ceeEEEcCCCeEEEcHHHHHHHHHhc
Confidence 33333 33457777666666777877777544
No 46
>PF12876 Cellulase-like: Sugar-binding cellulase-like; InterPro: IPR024778 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This entry represents a family of putative cellulase enzymes.; PDB: 3GYC_B.
Probab=68.97 E-value=19 Score=28.55 Aligned_cols=18 Identities=44% Similarity=0.774 Sum_probs=14.0
Q ss_pred HHHhC--CceeEEEeccC-ch
Q 014339 86 FKSFG--DRVKYWFTINE-PN 103 (426)
Q Consensus 86 ~~~fg--~~V~~w~t~NE-P~ 103 (426)
+++|| ++|.+|-.+|| |+
T Consensus 2 v~~~~~~~~Il~Wdl~NE~p~ 22 (88)
T PF12876_consen 2 VTRFGYDPRILAWDLWNEPPN 22 (88)
T ss_dssp HHHTT-GGGEEEEESSTTTT-
T ss_pred chhhcCCCCEEEEEeecCCCC
Confidence 56666 47999999999 76
No 47
>smart00642 Aamy Alpha-amylase domain.
Probab=64.31 E-value=11 Score=33.74 Aligned_cols=53 Identities=19% Similarity=0.364 Sum_probs=35.1
Q ss_pred CcccCCCeEEeccccccccc--c--CCC----CCCCh--HHHHHHHHHHHHHHHcCCeEEEEe
Q 014339 1 MESLGVNSYRFSISWARILP--K--GRF----GDVNS--EGINHYNKLIDALLLKGIQPFVTL 53 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P--~--~~~----g~~n~--~gl~~Y~~~i~~l~~~gi~P~vtL 53 (426)
|++||+++.-++--+..... . +.. -.+|+ -..+=.+++|++|.++||++|+.+
T Consensus 28 l~~lG~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~ 90 (166)
T smart00642 28 LKDLGVTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDV 90 (166)
T ss_pred HHHCCCCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 57899999988876655531 1 100 11221 123457799999999999999976
No 48
>KOG0496 consensus Beta-galactosidase [Carbohydrate transport and metabolism]
Probab=63.42 E-value=19 Score=38.99 Aligned_cols=85 Identities=13% Similarity=0.124 Sum_probs=65.4
Q ss_pred CcccCCCeEEeccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEE------E--eccCCCchhHHHhhCCC---
Q 014339 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFV------T--LTQFDSPQEIEDKYGAW--- 69 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~v------t--L~H~dlP~~l~~~~ggw--- 69 (426)
+|++|+|+.-.=+.|.-.+|.. |+.|.+|.-=-.+.|..+.++|+=.++ + .-|=++|.||....|.-
T Consensus 58 ~k~~Gln~IqtYVfWn~Hep~~--g~y~FsG~~DlvkFikl~~~~GLyv~LRiGPyIcaEw~~GG~P~wL~~~pg~~~Rt 135 (649)
T KOG0496|consen 58 AKAGGLNVIQTYVFWNLHEPSP--GKYDFSGRYDLVKFIKLIHKAGLYVILRIGPYICAEWNFGGLPWWLRNVPGIVFRT 135 (649)
T ss_pred HHhcCCceeeeeeecccccCCC--CcccccchhHHHHHHHHHHHCCeEEEecCCCeEEecccCCCcchhhhhCCceEEec
Confidence 5789999999999999999997 999999976555678888888865443 2 24557899998753322
Q ss_pred CChhhHHHHHHHHHHHHH
Q 014339 70 LSPESQEDFGYFADICFK 87 (426)
Q Consensus 70 ~~~~~~~~f~~ya~~~~~ 87 (426)
.|+-+..++.+|.+.++.
T Consensus 136 ~nepfk~~~~~~~~~iv~ 153 (649)
T KOG0496|consen 136 DNEPFKAEMERWTTKIVP 153 (649)
T ss_pred CChHHHHHHHHHHHHHHH
Confidence 367788888888888876
No 49
>cd02932 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN binding domain. YqjM is involved in the oxidative stress response of Bacillus subtilis. Like the other OYE members, each monomer of YqjM contains FMN as a non-covalently bound cofactor and uses NADPH as a reducing agent. The YqjM enzyme exists as a homotetramer that is assembled as a dimer of catalytically dependent dimers, while other OYE members exist only as monomers or dimers. Moreover, the protein displays a shared active site architecture where an arginine finger at the COOH terminus of one monomer extends into the active site of the adjacent monomer and is directly involved in substrate recognition. Another remarkable difference in the binding of the ligand in YqjM is represented by the contribution of the NH2-terminal tyrosine instead of a COOH-terminal tyrosine in OYE and its homologs.
Probab=61.74 E-value=1.8e+02 Score=29.06 Aligned_cols=40 Identities=25% Similarity=0.344 Sum_probs=32.4
Q ss_pred cccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCC
Q 014339 17 RILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFD 57 (426)
Q Consensus 17 RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~d 57 (426)
+..|... +-.+.+-+..++++.+.+.++|-..++=|+|-+
T Consensus 62 ~~~~~~~-~~~~d~~~~~~~~l~~~vh~~G~~~~~QL~H~G 101 (336)
T cd02932 62 RITPGDL-GLWNDEQIEALKRIVDFIHSQGAKIGIQLAHAG 101 (336)
T ss_pred CCCCCce-eecCHHHHHHHHHHHHHHHhcCCcEEEEccCCC
Confidence 3344432 566888899999999999999999999999953
No 50
>cd06543 GH18_PF-ChiA-like PF-ChiA is an uncharacterized chitinase found in the hyperthermophilic archaeon Pyrococcus furiosus with a glycosyl hydrolase family 18 (GH18) catalytic domain as well as a cellulose-binding domain. Members of this domain family are found not only in archaea but also in eukaryotes and prokaryotes. PF-ChiA exhibits hydrolytic activity toward both colloidal and crystalline (beta/alpha) chitins at high temperature.
Probab=47.88 E-value=57 Score=32.18 Aligned_cols=49 Identities=16% Similarity=0.219 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCC------hhhHHHHHHHHHHHHHHhC-CceeE
Q 014339 34 HYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLS------PESQEDFGYFADICFKSFG-DRVKY 95 (426)
Q Consensus 34 ~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~------~~~~~~f~~ya~~~~~~fg-~~V~~ 95 (426)
.....|.+|+++|++.+|++ |||.. ...++.|++....+.+.|+ +.|++
T Consensus 55 ~~~~~i~~lk~~G~kViiS~-------------GG~~g~~~~~~~~~~~~~~~a~~~~i~~y~~dgiDf 110 (294)
T cd06543 55 WIKSDIAALRAAGGDVIVSF-------------GGASGTPLATSCTSADQLAAAYQKVIDAYGLTHLDF 110 (294)
T ss_pred hHHHHHHHHHHcCCeEEEEe-------------cCCCCCccccCcccHHHHHHHHHHHHHHhCCCeEEE
Confidence 34578999999999999988 55543 4678888888888888887 34554
No 51
>cd02803 OYE_like_FMN_family Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.
Probab=47.79 E-value=1.6e+02 Score=28.97 Aligned_cols=127 Identities=22% Similarity=0.155 Sum_probs=71.5
Q ss_pred CCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCC---chh----------HHHhhC-----CC---CChhhHHHHHHHHH
Q 014339 25 GDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDS---PQE----------IEDKYG-----AW---LSPESQEDFGYFAD 83 (426)
Q Consensus 25 g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dl---P~~----------l~~~~g-----gw---~~~~~~~~f~~ya~ 83 (426)
|-.|++-++-++++++.+.++|-..++=|.|-+- |.. ...... .- .=.++++.|++-|+
T Consensus 69 ~~~~~~~~~~~~~~~~~vh~~g~~~~~Ql~h~G~~~~~~~~~~~~~~~s~~~~~~~~~~~~~mt~~ei~~~i~~~~~aA~ 148 (327)
T cd02803 69 GIYDDEQIPGLRKLTEAVHAHGAKIFAQLAHAGRQAQPNLTGGPPPAPSAIPSPGGGEPPREMTKEEIEQIIEDFAAAAR 148 (327)
T ss_pred CcCCHHHHHHHHHHHHHHHhCCCHhhHHhhCCCcCCCCcCCCCCccCCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHH
Confidence 6778899999999999999999999999999532 100 000000 00 12567888888888
Q ss_pred HHHHHhCCceeEEEeccCchhhhhhccccCCC-CCC--CCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhcc
Q 014339 84 ICFKSFGDRVKYWFTINEPNMQVTLSYRLGCH-PPA--HCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQK 160 (426)
Q Consensus 84 ~~~~~fg~~V~~w~t~NEP~~~~~~gy~~G~~-pPg--~~~~~~~~~~~~~~~~~~~~~~h~~l~Aha~a~~~~~~~~~~ 160 (426)
.+.+.==|.|+. -+-+||+...| .|. .+.. .. |.+ +. |...--.+.++.+|+. .
T Consensus 149 ~a~~aGfDgvei---------h~~~gyL~~qFlsp~~n~R~d----~y-Ggs----~e---nr~r~~~eii~avr~~--~ 205 (327)
T cd02803 149 RAKEAGFDGVEI---------HGAHGYLLSQFLSPYTNKRTD----EY-GGS----LE---NRARFLLEIVAAVREA--V 205 (327)
T ss_pred HHHHcCCCEEEE---------cchhhhHHHHhcCccccCCCc----cc-CCC----HH---HHHHHHHHHHHHHHHH--c
Confidence 877642244443 33456765544 332 1110 00 111 11 2333333455666664 2
Q ss_pred CCCCcEEEEecCce
Q 014339 161 DQGGSIGIILNTLW 174 (426)
Q Consensus 161 ~~~~~iGi~~~~~~ 174 (426)
.++..||+-++...
T Consensus 206 g~d~~i~vris~~~ 219 (327)
T cd02803 206 GPDFPVGVRLSADD 219 (327)
T ss_pred CCCceEEEEechhc
Confidence 34567888777543
No 52
>PF03511 Fanconi_A: Fanconi anaemia group A protein; InterPro: IPR003516 Fanconi anaemia (FA) [, , ] is a recessive inherited disease characterised by defective DNA repair. FA cells are sensitive to DNA cross-linking agents that cause chromosomal instability and cell death. The disease is manifested clinically by progressive pancytopenia, variable physical anomalies, and predisposition to malignancy []. Four complementation groups have been identified, designated A to D. The FA group A gene (FAA) has been cloned [], but its function remains to be elucidated.
Probab=46.48 E-value=14 Score=27.51 Aligned_cols=38 Identities=18% Similarity=0.363 Sum_probs=31.9
Q ss_pred ccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccC
Q 014339 16 ARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQF 56 (426)
Q Consensus 16 ~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~ 56 (426)
+++.|+. |.=.+++++...+++..|-++|| |.+.|++-
T Consensus 19 s~l~p~~--~~d~~kaldiCaeIL~cLE~R~i-sWl~LFql 56 (64)
T PF03511_consen 19 SYLAPKE--GADSLKALDICAEILGCLEKRKI-SWLVLFQL 56 (64)
T ss_pred HhcCccc--ccccHHHHHHHHHHHHHHHhCCC-cHHHhhhc
Confidence 5677876 66678999999999999999999 88888764
No 53
>PRK09525 lacZ beta-D-galactosidase; Reviewed
Probab=46.25 E-value=58 Score=37.96 Aligned_cols=32 Identities=13% Similarity=0.078 Sum_probs=24.6
Q ss_pred ChhhHHHHHHHHHHHHHHhCC--ceeEEEeccCc
Q 014339 71 SPESQEDFGYFADICFKSFGD--RVKYWFTINEP 102 (426)
Q Consensus 71 ~~~~~~~f~~ya~~~~~~fg~--~V~~w~t~NEP 102 (426)
+++..+.+.+=++.+++|.++ .|-.|...||+
T Consensus 430 dp~~~~~~~~~~~~mV~RdrNHPSIi~WSlgNE~ 463 (1027)
T PRK09525 430 DPRWLPAMSERVTRMVQRDRNHPSIIIWSLGNES 463 (1027)
T ss_pred CHHHHHHHHHHHHHHHHhCCCCCEEEEEeCccCC
Confidence 355666677777788888876 48999999996
No 54
>PF13547 GTA_TIM: GTA TIM-barrel-like domain
Probab=45.55 E-value=34 Score=33.47 Aligned_cols=41 Identities=17% Similarity=0.289 Sum_probs=27.4
Q ss_pred CCEEEeecCCcCCCCCCCC-----------------CCCccCcHhHHHHHHHHHHHHH
Q 014339 310 TPMFITENGYGEICMPNSS-----------------TEDLLNDVKRVEYMASYLDALI 350 (426)
Q Consensus 310 ~PI~ITENG~~~~~~~~~~-----------------~~~~v~D~~Ri~yl~~~l~~v~ 350 (426)
+||+.||-||+.-+...+. ..|.++|--+..||+.+|..-.
T Consensus 207 KpIwftE~GcpavDkgtNqPNvF~DpkSsEs~~P~~S~g~rDd~~Qr~~lea~~~~w~ 264 (299)
T PF13547_consen 207 KPIWFTEYGCPAVDKGTNQPNVFLDPKSSESALPYFSNGARDDLIQRRYLEATLGYWD 264 (299)
T ss_pred cceEEEecCCchhcCcCCCCccccCcccccccCCCCCCCCccHHHHHHHHHHHHHHhc
Confidence 7999999999755433111 1256777777777777776553
No 55
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase. Chlamydial members of the family have a long insert. The family is largely restricted to Bacteria, where it is widely but not universally distributed. No homology can be detected between the GcpE family and other proteins.
Probab=44.83 E-value=82 Score=31.67 Aligned_cols=53 Identities=11% Similarity=0.044 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHHHHHHHH
Q 014339 33 NHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADIC 85 (426)
Q Consensus 33 ~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~ya~~~ 85 (426)
+..+.+++.++++|+--=+...|=.|+..+.++||+=+.+.+++.=.++++.|
T Consensus 108 e~v~~vv~~ak~~~ipIRIGVN~GSL~~~~~~kyg~~t~eamveSAl~~v~~l 160 (346)
T TIGR00612 108 ERVRDVVEKARDHGKAMRIGVNHGSLERRLLEKYGDATAEAMVQSALEEAAIL 160 (346)
T ss_pred HHHHHHHHHHHHCCCCEEEecCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999987645555666656666654
No 56
>COG2951 MltB Membrane-bound lytic murein transglycosylase B [Cell envelope biogenesis, outer membrane]
Probab=43.87 E-value=51 Score=33.27 Aligned_cols=106 Identities=18% Similarity=0.270 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHcCCC-C----EEEeecCCcCCCCCCCCC---CC-ccCcHhHHHHHHHHHHHHHHHHHcC-CC---EEEE
Q 014339 296 MWKIIKYIKERYKNT-P----MFITENGYGEICMPNSST---ED-LLNDVKRVEYMASYLDALITAVRDG-AD---VRGY 362 (426)
Q Consensus 296 l~~~L~~~~~rY~~~-P----I~ITENG~~~~~~~~~~~---~~-~v~D~~Ri~yl~~~l~~v~~Ai~dG-v~---V~GY 362 (426)
-..+|.++-++|+-+ | |+=+|.|++.......-. .. ...|.+|.+|.+..|.+.++.+++| ++ .+|
T Consensus 112 ~~~~l~~~e~~yGVp~~ii~aiWg~Et~fG~~~g~~~v~~ALaTLa~~~~rR~~~f~~eL~aaL~ii~~gdv~~~~~~G- 190 (343)
T COG2951 112 YAAALARAERRYGVPAPILVAIWGMETGFGRVMGKFRVLDALATLAFADPRRAGFFRDELIAALKIIQDGDVDPLALKG- 190 (343)
T ss_pred HHHHHHHHHHHhCCCchheeeeehhhcccccccCccchHHHHhhhcccccchhhhhHHHHHHHHHHHhhcCCCcccccc-
Confidence 456889999999721 2 666899998765442211 11 2248999999999999998988876 77 777
Q ss_pred EeecCCcccccCCCCc------ceeeeEEecCCC-Cccccc----chHHHHHHHHHhCCC
Q 014339 363 FVWSLLDSFEWTYGYT------ARFGLHHVDFAT-LKRTPK----LSATWYKHFIAKHKL 411 (426)
Q Consensus 363 ~~WSl~Dn~EW~~Gy~------~rfGL~~VD~~~-~~R~pK----~S~~~y~~ii~~~~~ 411 (426)
+|+..+. ..|=.+.||++. -+|-+. ++..--.+.++++|-
T Consensus 191 ---------SwAGAmGq~QFmPss~~~YaVD~DGDG~~Diw~s~~DAlaS~ANyL~~~GW 241 (343)
T COG2951 191 ---------SWAGAMGQTQFMPSSYLKYAVDGDGDGHRDIWNSVPDALASAANYLKSHGW 241 (343)
T ss_pred ---------hhhhccCCcccCcHHHHHhhhcCCCCCccCCccChHhHHHHHHHHHHHcCC
Confidence 8885443 266778899986 566666 444555556666664
No 57
>PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed
Probab=42.67 E-value=71 Score=37.20 Aligned_cols=31 Identities=13% Similarity=0.100 Sum_probs=24.5
Q ss_pred hhhHHHHHHHHHHHHHHhCC--ceeEEEeccCc
Q 014339 72 PESQEDFGYFADICFKSFGD--RVKYWFTINEP 102 (426)
Q Consensus 72 ~~~~~~f~~ya~~~~~~fg~--~V~~w~t~NEP 102 (426)
++..+.|.+=++.+++|.++ .|-.|..-||.
T Consensus 418 p~~~~~~~~~~~~mV~RdrNHPSIi~WslGNE~ 450 (1021)
T PRK10340 418 PQWEKVYVDRIVRHIHAQKNHPSIIIWSLGNES 450 (1021)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCEEEEEECccCc
Confidence 44556677778889999876 48999999996
No 58
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end. GLases cleave the bond between C1 and O1 of the nonreducing sugar residue of alpha-glucans to generate a monosaccharide product with a double bond between C1 and C2. This family corresponds to subgroup 2 in the Ernst et al classification of GH31 enzymes.
Probab=42.56 E-value=59 Score=32.69 Aligned_cols=69 Identities=19% Similarity=0.278 Sum_probs=46.1
Q ss_pred HHHHHHHHHcCCeEEEEeccC-----CCchhHHHhhCCCCChhhHHHHHHHHHHHHHHhCCceeEEEeccCchhhhhh
Q 014339 36 NKLIDALLLKGIQPFVTLTQF-----DSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTL 108 (426)
Q Consensus 36 ~~~i~~l~~~gi~P~vtL~H~-----dlP~~l~~~~ggw~~~~~~~~f~~ya~~~~~~fg~~V~~w~t~NEP~~~~~~ 108 (426)
+.++++|.+.|++.++.+.-+ ..|.. ..+--|+||++.++|.+..+.+.+ .|- .-+|+=+|||.+++..
T Consensus 67 ~~mv~~L~~~G~klv~~i~P~i~~g~~~~~~--~~~pDftnp~ar~wW~~~~~~l~~-~Gv-~~~W~DmnEp~~~~~~ 140 (332)
T cd06601 67 KEMFDNLHNKGLKCSTNITPVISYGGGLGSP--GLYPDLGRPDVREWWGNQYKYLFD-IGL-EFVWQDMTTPAIMPSY 140 (332)
T ss_pred HHHHHHHHHCCCeEEEEecCceecCccCCCC--ceeeCCCCHHHHHHHHHHHHHHHh-CCC-ceeecCCCCcccccCC
Confidence 589999999999877755321 11110 001247889999999887665543 343 3499999999987653
No 59
>COG0821 gcpE 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase [Lipid metabolism]
Probab=39.78 E-value=1.1e+02 Score=30.75 Aligned_cols=64 Identities=20% Similarity=0.222 Sum_probs=49.1
Q ss_pred cccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHHHHHHHHH
Q 014339 17 RILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICF 86 (426)
Q Consensus 17 RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~ya~~~~ 86 (426)
||.| |.+-.+. ....+++.++++||-.=+...|=.|.+-|.++||+-+.+..++-=.++|+.+-
T Consensus 100 RINP----GNig~~~--~v~~vVe~Ak~~g~piRIGVN~GSLek~~~~ky~~pt~ealveSAl~~a~~~e 163 (361)
T COG0821 100 RINP----GNIGFKD--RVREVVEAAKDKGIPIRIGVNAGSLEKRLLEKYGGPTPEALVESALEHAELLE 163 (361)
T ss_pred EECC----cccCcHH--HHHHHHHHHHHcCCCEEEecccCchhHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 5666 5444442 67899999999999999999999999999999987665555555555666543
No 60
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=38.46 E-value=98 Score=27.77 Aligned_cols=59 Identities=20% Similarity=0.339 Sum_probs=37.2
Q ss_pred CcccCCCeEEecccccccc-----ccCC-CCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHH
Q 014339 1 MESLGVNSYRFSISWARIL-----PKGR-FGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIE 63 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~-----P~~~-~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~ 63 (426)
|+++|+++.=+- |+... |... .+.+.....+-...+++++.++||+.+|.|+.. |.|.+
T Consensus 29 m~~~GidtlIlq--~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmkv~~Gl~~~--~~~w~ 93 (166)
T PF14488_consen 29 MKAIGIDTLILQ--WTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMKVFVGLYFD--PDYWD 93 (166)
T ss_pred HHHcCCcEEEEE--EeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCEEEEeCCCC--chhhh
Confidence 577888876432 44432 2210 012222344567799999999999999999873 45554
No 61
>PRK12858 tagatose 1,6-diphosphate aldolase; Reviewed
Probab=38.16 E-value=1e+02 Score=31.18 Aligned_cols=93 Identities=11% Similarity=0.150 Sum_probs=57.4
Q ss_pred cccCCCeEEeccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHHHH
Q 014339 2 ESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYF 81 (426)
Q Consensus 2 k~lG~~~yRfsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~y 81 (426)
+++|.++.-+-+-|. |+.. ..+|..-+++-.++.++|.+.||.-++=+.=++.+.-..+. .-+ .+..++..+.-
T Consensus 116 ~~~GAdAVk~lv~~~---~d~~-~~~~~~~~~~l~rv~~ec~~~giPlllE~l~y~~~~~~~~~-~~~-a~~~p~~V~~a 189 (340)
T PRK12858 116 KEAGADAVKLLLYYR---PDED-DAINDRKHAFVERVGAECRANDIPFFLEPLTYDGKGSDKKA-EEF-AKVKPEKVIKT 189 (340)
T ss_pred HHcCCCEEEEEEEeC---CCcc-hHHHHHHHHHHHHHHHHHHHcCCceEEEEeccCCCcccccc-ccc-cccCHHHHHHH
Confidence 567888888887776 5421 34577888899999999999999988854222222211110 001 11335666677
Q ss_pred HHHHHH-HhCC-ceeEEEecc
Q 014339 82 ADICFK-SFGD-RVKYWFTIN 100 (426)
Q Consensus 82 a~~~~~-~fg~-~V~~w~t~N 100 (426)
++.+.+ +||- -+|.-.|.|
T Consensus 190 ~r~~~~~elGaDvlKve~p~~ 210 (340)
T PRK12858 190 MEEFSKPRYGVDVLKVEVPVD 210 (340)
T ss_pred HHHHhhhccCCeEEEeeCCCC
Confidence 777666 7874 355555544
No 62
>PRK09432 metF 5,10-methylenetetrahydrofolate reductase; Provisional
Probab=37.48 E-value=1.4e+02 Score=29.50 Aligned_cols=72 Identities=15% Similarity=0.206 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHcCCe-EEE----------------EeccCCCchhHHHhhCCCCCh-h-----hHHHHHHHHHHHHHHhC
Q 014339 34 HYNKLIDALLLKGIQ-PFV----------------TLTQFDSPQEIEDKYGAWLSP-E-----SQEDFGYFADICFKSFG 90 (426)
Q Consensus 34 ~Y~~~i~~l~~~gi~-P~v----------------tL~H~dlP~~l~~~~ggw~~~-~-----~~~~f~~ya~~~~~~fg 90 (426)
-|.+.++.|++.||+ |++ .+++-++|.|+.+++-..... + -++.-++-++.+.+.--
T Consensus 190 ~~~~f~~~~~~~Gi~vPIi~GI~pi~s~~~~~~~~~~~Gv~vP~~l~~~l~~~~d~~~~~~~~Gi~~a~e~i~~L~~~gv 269 (296)
T PRK09432 190 SYLRFRDRCVSAGIDVEIVPGILPVSNFKQLKKFADMTNVRIPAWMAKMFDGLDDDAETRKLVGASIAMDMVKILSREGV 269 (296)
T ss_pred HHHHHHHHHHHcCCCCCEEeeccccCCHHHHHHHHHccCCCCCHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 466899999999855 322 356789999998877666432 2 23334444444444323
Q ss_pred CceeEEEeccCchhhh
Q 014339 91 DRVKYWFTINEPNMQV 106 (426)
Q Consensus 91 ~~V~~w~t~NEP~~~~ 106 (426)
+.|.++ |+|-+....
T Consensus 270 ~GvH~y-t~n~~~~~~ 284 (296)
T PRK09432 270 KDFHFY-TLNRAELTY 284 (296)
T ss_pred CEEEEe-cCCChHHHH
Confidence 457776 699887654
No 63
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal domain found near the membrane-bound end, and a C-terminal luminal domain. Both of
Probab=37.43 E-value=1.6e+02 Score=29.56 Aligned_cols=69 Identities=19% Similarity=0.214 Sum_probs=49.6
Q ss_pred HHHHHHHHHcCCeEEEEeccCCCch-------hHHH--hh--------------------C---CCCChhhHHHHHHHHH
Q 014339 36 NKLIDALLLKGIQPFVTLTQFDSPQ-------EIED--KY--------------------G---AWLSPESQEDFGYFAD 83 (426)
Q Consensus 36 ~~~i~~l~~~gi~P~vtL~H~dlP~-------~l~~--~~--------------------g---gw~~~~~~~~f~~ya~ 83 (426)
+++|++|+++|++.++.+.-+-.+. -+++ +. + -++||+..++|.+..+
T Consensus 69 ~~mi~~L~~~G~k~~~~i~P~v~~~~~~~~~~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~ 148 (339)
T cd06602 69 PEFVDELHANGQHYVPILDPAISANEPTGSYPPYDRGLEMDVFIKNDDGSPYIGKVWPGYTVFPDFLNPNTQEWWTDEIK 148 (339)
T ss_pred HHHHHHHHHCCCEEEEEEeCccccCcCCCCCHHHHHHHHCCeEEECCCCCEEEEEeCCCCCcCcCCCCHHHHHHHHHHHH
Confidence 6899999999999999886654332 0111 00 1 3678999999988887
Q ss_pred HHHHHhCCceeEEEeccCchhh
Q 014339 84 ICFKSFGDRVKYWFTINEPNMQ 105 (426)
Q Consensus 84 ~~~~~fg~~V~~w~t~NEP~~~ 105 (426)
.+++..|- --+|+=+|||..+
T Consensus 149 ~~~~~~Gv-dg~w~D~~Ep~~~ 169 (339)
T cd06602 149 DFHDQVPF-DGLWIDMNEPSNF 169 (339)
T ss_pred HHHhcCCC-cEEEecCCCCchH
Confidence 77766654 5789999999643
No 64
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae.
Probab=36.44 E-value=1.2e+02 Score=30.26 Aligned_cols=71 Identities=18% Similarity=0.216 Sum_probs=49.8
Q ss_pred HHHHHHHHHcCCeEEEEeccCCC-----chhHHHh------------------------hCCCCChhhHHHHHHHHHHHH
Q 014339 36 NKLIDALLLKGIQPFVTLTQFDS-----PQEIEDK------------------------YGAWLSPESQEDFGYFADICF 86 (426)
Q Consensus 36 ~~~i~~l~~~gi~P~vtL~H~dl-----P~~l~~~------------------------~ggw~~~~~~~~f~~ya~~~~ 86 (426)
+.+|++|+++|++.++.+.-+-. |..-+-+ +--++||++.++|.+..+.+.
T Consensus 67 ~~mi~~L~~~G~k~~~~~~P~v~~~~~~~~y~e~~~~g~~vk~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~ 146 (339)
T cd06603 67 EKMQEKLASKGRKLVTIVDPHIKRDDGYYVYKEAKDKGYLVKNSDGGDFEGWCWPGSSSWPDFLNPEVRDWWASLFSYDK 146 (339)
T ss_pred HHHHHHHHHCCCEEEEEecCceecCCCCHHHHHHHHCCeEEECCCCCEEEEEECCCCcCCccCCChhHHHHHHHHHHHHh
Confidence 47999999999999888765532 2211100 013679999999999888776
Q ss_pred HHhC-CceeEEEeccCchhhh
Q 014339 87 KSFG-DRVKYWFTINEPNMQV 106 (426)
Q Consensus 87 ~~fg-~~V~~w~t~NEP~~~~ 106 (426)
...+ .-+-+|+=+|||.++.
T Consensus 147 ~~~~~g~~g~w~D~~Ep~~f~ 167 (339)
T cd06603 147 YKGSTENLYIWNDMNEPSVFN 167 (339)
T ss_pred hcccCCCceEEeccCCccccC
Confidence 5432 3367899999998654
No 65
>PF04646 DUF604: Protein of unknown function, DUF604; InterPro: IPR006740 This family includes a conserved region found in several uncharacterised plant proteins.
Probab=36.15 E-value=14 Score=35.56 Aligned_cols=72 Identities=14% Similarity=0.135 Sum_probs=41.4
Q ss_pred HHHc-CCeEEEEeccCCCchhHHHhhCCCCChhhHHHHHHHHHHHHHHhCCceeEEEeccCchhhhhhccccCCCC
Q 014339 42 LLLK-GIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCHP 116 (426)
Q Consensus 42 l~~~-gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~ya~~~~~~fg~~V~~w~t~NEP~~~~~~gy~~G~~p 116 (426)
+.+. .+.|+|+|||||.=..+ +.+....+.++.+.+=|+.--.++-.+---|---....+-+-+||..-.++
T Consensus 76 ~~~a~~~~pl~SlHH~~~~~Pi---fP~~~~~~al~~L~~a~~~d~~~~lqqsicyd~~~~wsvsVSwGYsVqvy~ 148 (255)
T PF04646_consen 76 FLEAHPLAPLVSLHHWDSVDPI---FPNMSRLQALRHLLKAAKVDPARILQQSICYDRRRNWSVSVSWGYSVQVYR 148 (255)
T ss_pred eeecCCCCceeeeeehhhcccc---CCCCCHHHHHHHHHHHHhhChHhhhheeeeccCceEEEEEEEccEEEEEEC
Confidence 4444 58999999999973332 356666666777666444433333222222222233345566899877773
No 66
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function.
Probab=35.96 E-value=4.4e+02 Score=26.06 Aligned_cols=60 Identities=20% Similarity=0.418 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHcCCeEEEEe-ccC----------CCchhHHHh-------h----C--CCCC---hhhHHHHHHHHH
Q 014339 31 GINHYNKLIDALLLKGIQPFVTL-TQF----------DSPQEIEDK-------Y----G--AWLS---PESQEDFGYFAD 83 (426)
Q Consensus 31 gl~~Y~~~i~~l~~~gi~P~vtL-~H~----------dlP~~l~~~-------~----g--gw~~---~~~~~~f~~ya~ 83 (426)
|.+-...+|+++.++||+...-+ +-+ ..|.|+... + | .|+| |++.+...+-++
T Consensus 68 g~DpL~~~I~eaHkrGlevHAW~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lnP~~PeVr~~i~~~v~ 147 (311)
T PF02638_consen 68 GFDPLEFMIEEAHKRGLEVHAWFRVGFNAPDVSHILKKHPEWFAVNHPGWVRTYEDANGGYYWLNPGHPEVRDYIIDIVK 147 (311)
T ss_pred CccHHHHHHHHHHHcCCEEEEEEEeecCCCchhhhhhcCchhheecCCCceeecccCCCCceEECCCCHHHHHHHHHHHH
Confidence 44556699999999999998655 111 346665311 1 1 2554 788888899999
Q ss_pred HHHHHhC
Q 014339 84 ICFKSFG 90 (426)
Q Consensus 84 ~~~~~fg 90 (426)
.++++|.
T Consensus 148 Eiv~~Yd 154 (311)
T PF02638_consen 148 EIVKNYD 154 (311)
T ss_pred HHHhcCC
Confidence 9999985
No 67
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY. CtsZ and CtsY both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=35.38 E-value=1.6e+02 Score=29.14 Aligned_cols=68 Identities=24% Similarity=0.354 Sum_probs=46.3
Q ss_pred HHHHHHHHHcCCeEEEEeccC---CCchhHH--Hh-h-------------------C---CCCChhhHHHHHHHHHHHHH
Q 014339 36 NKLIDALLLKGIQPFVTLTQF---DSPQEIE--DK-Y-------------------G---AWLSPESQEDFGYFADICFK 87 (426)
Q Consensus 36 ~~~i~~l~~~gi~P~vtL~H~---dlP~~l~--~~-~-------------------g---gw~~~~~~~~f~~ya~~~~~ 87 (426)
+++|++|+++|++.++.+.-+ +.|..-+ ++ + + -++||++.++|.+..+.+ .
T Consensus 73 ~~mi~~L~~~G~k~~~~v~P~v~~~~~~y~e~~~~g~l~~~~~~~~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~-~ 151 (317)
T cd06598 73 AGMIADLAKKGVKTIVITEPFVLKNSKNWGEAVKAGALLKKDQGGVPTLFDFWFGNTGLIDWFDPAAQAWFHDNYKKL-I 151 (317)
T ss_pred HHHHHHHHHcCCcEEEEEcCcccCCchhHHHHHhCCCEEEECCCCCEeeeeccCCCccccCCCCHHHHHHHHHHHHHh-h
Confidence 489999999999999988655 3343211 10 0 0 256999999998877765 3
Q ss_pred HhCCceeEEEeccCchhh
Q 014339 88 SFGDRVKYWFTINEPNMQ 105 (426)
Q Consensus 88 ~fg~~V~~w~t~NEP~~~ 105 (426)
..|- --+|+=+|||.++
T Consensus 152 ~~Gv-dg~w~D~~Ep~~~ 168 (317)
T cd06598 152 DQGV-TGWWGDLGEPEVH 168 (317)
T ss_pred hCCc-cEEEecCCCcccc
Confidence 3332 4479999999643
No 68
>cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas.
Probab=35.37 E-value=99 Score=29.40 Aligned_cols=74 Identities=14% Similarity=0.153 Sum_probs=45.6
Q ss_pred eccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHHHHHHHHHHHhC
Q 014339 11 FSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFG 90 (426)
Q Consensus 11 fsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~ya~~~~~~fg 90 (426)
..++|..|.++|. -.+.. .......+++.++++|++.++++-.++...... --.+++..+.|++=+-..+++++
T Consensus 26 v~~~f~~i~~~G~-l~~~~-~~~~~~~~~~~~~~~~~kvl~sigg~~~~~~~~----~~~~~~~r~~fi~~lv~~~~~~~ 99 (253)
T cd06545 26 INLAFANPDANGT-LNANP-VRSELNSVVNAAHAHNVKILISLAGGSPPEFTA----ALNDPAKRKALVDKIINYVVSYN 99 (253)
T ss_pred EEEEEEEECCCCe-EEecC-cHHHHHHHHHHHHhCCCEEEEEEcCCCCCcchh----hhcCHHHHHHHHHHHHHHHHHhC
Confidence 4566777777652 12210 123456889999999999999997766543221 12466666777666555566654
No 69
>PRK09525 lacZ beta-D-galactosidase; Reviewed
Probab=35.36 E-value=93 Score=36.29 Aligned_cols=76 Identities=26% Similarity=0.322 Sum_probs=51.2
Q ss_pred CCCEEEeecCCcCCCCCCCCCCCccCcHhHHHHHHHHHHHHHHHHHcCCCEEEEEeecCCcccccC---C-----CCcce
Q 014339 309 NTPMFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRDGADVRGYFVWSLLDSFEWT---Y-----GYTAR 380 (426)
Q Consensus 309 ~~PI~ITENG~~~~~~~~~~~~~~v~D~~Ri~yl~~~l~~v~~Ai~dGv~V~GY~~WSl~Dn~EW~---~-----Gy~~r 380 (426)
++|++++|-|.+.... .| -|++|. ++++.--.+.|=|+|-.+|.--.. + +|.--
T Consensus 531 ~kP~i~cEY~Hamgn~-----~g---------~l~~yw----~~~~~~~~~~GgfIW~w~Dqg~~~~~~~G~~~~~YGGD 592 (1027)
T PRK09525 531 TRPLILCEYAHAMGNS-----LG---------GFAKYW----QAFRQYPRLQGGFIWDWVDQGLTKYDENGNPWWAYGGD 592 (1027)
T ss_pred CCCEEEEechhcccCc-----Cc---------cHHHHH----HHHhcCCCeeEEeeEeccCcceeeECCCCCEEEEECCc
Confidence 4899999999875432 11 234444 455666779999999999964322 1 13323
Q ss_pred e------------eeEEecCCCCcccccchHHHHHHHHH
Q 014339 381 F------------GLHHVDFATLKRTPKLSATWYKHFIA 407 (426)
Q Consensus 381 f------------GL~~VD~~~~~R~pK~S~~~y~~ii~ 407 (426)
| |||.-| |+|++..+=+|++.+
T Consensus 593 fgd~p~d~nFc~dGlv~~d-----R~p~p~~~E~K~v~q 626 (1027)
T PRK09525 593 FGDTPNDRQFCMNGLVFPD-----RTPHPALYEAKHAQQ 626 (1027)
T ss_pred CCCCCCCCCceeceeECCC-----CCCCccHHHHHhhcC
Confidence 3 555444 789999999999876
No 70
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal do
Probab=34.63 E-value=1.7e+02 Score=28.97 Aligned_cols=70 Identities=21% Similarity=0.293 Sum_probs=48.3
Q ss_pred HHHHHHHHHHcCCeEEEEeccCCC-----chhHHH--h----------------------hCCCCChhhHHHHHHHHHHH
Q 014339 35 YNKLIDALLLKGIQPFVTLTQFDS-----PQEIED--K----------------------YGAWLSPESQEDFGYFADIC 85 (426)
Q Consensus 35 Y~~~i~~l~~~gi~P~vtL~H~dl-----P~~l~~--~----------------------~ggw~~~~~~~~f~~ya~~~ 85 (426)
-+++|++|.++|++.++.+.-+-. |...+. + +--|+||++.++|.+..+.+
T Consensus 66 p~~~i~~l~~~g~k~~~~~~P~i~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~w~G~~~~~Dftnp~a~~ww~~~~~~~ 145 (317)
T cd06600 66 PKKLIDELHKRNVKLVTIVDPGIRVDQNYSPFLSGMDKGKFCEIESGELFVGKMWPGTTVYPDFTNPDTREWWAGLFSEW 145 (317)
T ss_pred HHHHHHHHHHCCCEEEEEeeccccCCCCChHHHHHHHCCEEEECCCCCeEEEeecCCCccccCCCChHHHHHHHHHHHHH
Confidence 358999999999998776644321 221110 0 01368999999999888887
Q ss_pred HHHhCCceeEEEeccCchhh
Q 014339 86 FKSFGDRVKYWFTINEPNMQ 105 (426)
Q Consensus 86 ~~~fg~~V~~w~t~NEP~~~ 105 (426)
....|- .-+|+=+|||..+
T Consensus 146 ~~~~gv-dg~w~D~~Ep~~~ 164 (317)
T cd06600 146 LNSQGV-DGIWLDMNEPSDF 164 (317)
T ss_pred hhcCCC-ceEEeeCCCCccH
Confidence 766655 5589999999643
No 71
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=34.13 E-value=1.5e+02 Score=33.51 Aligned_cols=100 Identities=21% Similarity=0.379 Sum_probs=62.6
Q ss_pred ccCCCeEEeccc-cccccccCCCCCC--ChHHHHHHHHHHHHHHHcCCeEEEEeccC---CCchh--HHHh---------
Q 014339 3 SLGVNSYRFSIS-WARILPKGRFGDV--NSEGINHYNKLIDALLLKGIQPFVTLTQF---DSPQE--IEDK--------- 65 (426)
Q Consensus 3 ~lG~~~yRfsi~-W~RI~P~~~~g~~--n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~---dlP~~--l~~~--------- 65 (426)
++=++++++++. |.+ .- +.| |+.-.--=+.||++|.+.||+-++.+... |.|+- +.++
T Consensus 293 ~IP~d~~~lD~~~~~~---~~--~~F~wd~~~FP~pk~mi~~l~~~Gikl~~~i~P~i~~d~~~~~e~~~~Gy~~k~~~g 367 (772)
T COG1501 293 DIPLDVFVLDIDFWMD---NW--GDFTWDPDRFPDPKQMIAELHEKGIKLIVIINPYIKQDSPLFKEAIEKGYFVKDPDG 367 (772)
T ss_pred cCcceEEEEeehhhhc---cc--cceEECcccCCCHHHHHHHHHhcCceEEEEeccccccCCchHHHHHHCCeEEECCCC
Confidence 455788999995 876 11 211 11111112389999999999999987653 33322 1111
Q ss_pred ----------hC---CCCChhhHHHHHHHHHHHHHHhCCceeEEEeccCchhhhhh
Q 014339 66 ----------YG---AWLSPESQEDFGYFADICFKSFGDRVKYWFTINEPNMQVTL 108 (426)
Q Consensus 66 ----------~g---gw~~~~~~~~f~~ya~~~~~~fg~~V~~w~t~NEP~~~~~~ 108 (426)
.+ -++||+..++|.+....-..-+|- .-+|.=+|||.+....
T Consensus 368 ~~~~~~~w~~~~a~~DFtnp~~r~Ww~~~~~~~l~d~Gv-~g~W~D~nEp~~~~~~ 422 (772)
T COG1501 368 EIYQADFWPGNSAFPDFTNPDAREWWASDKKKNLLDLGV-DGFWNDMNEPEPFDGD 422 (772)
T ss_pred CEeeecccCCcccccCCCCHHHHHHHHHHHHhHHHhcCc-cEEEccCCCCcccccc
Confidence 01 267999999999743333444443 7799999999987644
No 72
>PRK05799 coproporphyrinogen III oxidase; Provisional
Probab=34.06 E-value=82 Score=31.87 Aligned_cols=98 Identities=17% Similarity=0.191 Sum_probs=55.0
Q ss_pred CcccCCCeEEeccccccccccCC--CCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCChhhHHHH
Q 014339 1 MESLGVNSYRFSISWARILPKGR--FGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDF 78 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~--~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f 78 (426)
|+++|++ |+||.---.-++-. -|... ..+-..+.|+.|++.|+..+..-+=+++|. ++.+.|
T Consensus 105 l~~~G~~--rvsiGvqS~~d~~L~~l~R~~--~~~~~~~ai~~l~~~g~~~v~~dli~GlPg------------qt~e~~ 168 (374)
T PRK05799 105 LKSMGVN--RLSIGLQAWQNSLLKYLGRIH--TFEEFLENYKLARKLGFNNINVDLMFGLPN------------QTLEDW 168 (374)
T ss_pred HHHcCCC--EEEEECccCCHHHHHHcCCCC--CHHHHHHHHHHHHHcCCCcEEEEeecCCCC------------CCHHHH
Confidence 4678888 66666644444321 02211 133566889999999997553333456663 235666
Q ss_pred HHHHHHHHHHhCCceeEEEeccCchhhhhhccccCC
Q 014339 79 GYFADICFKSFGDRVKYWFTINEPNMQVTLSYRLGC 114 (426)
Q Consensus 79 ~~ya~~~~~~fg~~V~~w~t~NEP~~~~~~gy~~G~ 114 (426)
.+-.+.+.+.=-+.|..+.-.-+|+.....-+..|.
T Consensus 169 ~~~l~~~~~l~~~~is~y~l~~~pgT~l~~~~~~g~ 204 (374)
T PRK05799 169 KETLEKVVELNPEHISCYSLIIEEGTPFYNLYENGK 204 (374)
T ss_pred HHHHHHHHhcCCCEEEEeccEecCCCHHHHHHhcCC
Confidence 666666654322556666555577754433333343
No 73
>PF13812 PPR_3: Pentatricopeptide repeat domain
Probab=33.31 E-value=26 Score=21.51 Aligned_cols=14 Identities=29% Similarity=0.629 Sum_probs=12.1
Q ss_pred HHHHHHHHHcCCeE
Q 014339 36 NKLIDALLLKGIQP 49 (426)
Q Consensus 36 ~~~i~~l~~~gi~P 49 (426)
.++++.|++.||+|
T Consensus 21 ~~~~~~M~~~gv~P 34 (34)
T PF13812_consen 21 LQLFDEMKEQGVKP 34 (34)
T ss_pred HHHHHHHHHhCCCC
Confidence 47889999999988
No 74
>cd02929 TMADH_HD_FMN Trimethylamine dehydrogenase (TMADH) and histamine dehydrogenase (HD) FMN-binding domain. TMADH is an iron-sulfur flavoprotein that catalyzes the oxidative demethylation of trimethylamine to form dimethylamine and formaldehyde. The protein forms a symetrical dimer with each subunit containing one 4Fe-4S cluster and one FMN cofactor. It contains a unique flavin, in the form of a 6-S-cysteinyl FMN which is bent by ~25 degrees along the N5-N10 axis of the flavin isoalloxazine ring. This modification of the conformation of the flavin is thought to facilitate catalysis.The closely related histamine dehydrogenase catalyzes oxidative deamination of histamine.
Probab=33.07 E-value=5.4e+02 Score=26.14 Aligned_cols=130 Identities=11% Similarity=-0.030 Sum_probs=75.6
Q ss_pred CCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCC-------------chhHHHhh--------CCCC---ChhhHHHHHH
Q 014339 25 GDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDS-------------PQEIEDKY--------GAWL---SPESQEDFGY 80 (426)
Q Consensus 25 g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dl-------------P~~l~~~~--------ggw~---~~~~~~~f~~ 80 (426)
|-++.+-+.-++++++.+.++|-..++=|+|-+- |..+.... -..+ =.++++.|++
T Consensus 75 ~l~~d~~i~~~~~l~~~vh~~G~~i~~QL~H~G~~~~~~~~~~~~~~ps~~~~~~~~~~~~~p~~mt~~eI~~ii~~f~~ 154 (370)
T cd02929 75 RLWDDGDIRNLAAMTDAVHKHGALAGIELWHGGAHAPNRESRETPLGPSQLPSEFPTGGPVQAREMDKDDIKRVRRWYVD 154 (370)
T ss_pred CcCCHHHHHHHHHHHHHHHHCCCeEEEecccCCCCCCccCCCCCccCCCCCCCCccccCCCCCccCCHHHHHHHHHHHHH
Confidence 6788899999999999999999999999999542 10010000 0011 1256777777
Q ss_pred HHHHHHHHhCCceeEEEeccCchhhhhhccccCCC-CCC--CCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHh
Q 014339 81 FADICFKSFGDRVKYWFTINEPNMQVTLSYRLGCH-PPA--HCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTK 157 (426)
Q Consensus 81 ya~~~~~~fg~~V~~w~t~NEP~~~~~~gy~~G~~-pPg--~~~~~~~~~~~~~~~~~~~~~~h~~l~Aha~a~~~~~~~ 157 (426)
=|+.+.+.==|-|.. -+-.||+...| .|. .+. +..+| | +-|-++--.+.++.+|+.
T Consensus 155 AA~ra~~aGfDgVEi---------h~ahGyLl~QFlSp~~N~Rt----D~yGG-s-------lenR~Rf~~eii~aIr~~ 213 (370)
T cd02929 155 AALRARDAGFDIVYV---------YAAHGYLPLQFLLPRYNKRT----DEYGG-S-------LENRARFWRETLEDTKDA 213 (370)
T ss_pred HHHHHHHcCCCEEEE---------cccccchHHHhhCccccCCc----cccCC-C-------hHhhhHHHHHHHHHHHHH
Confidence 666665542254543 34567776665 232 221 01111 1 224444445666777774
Q ss_pred hccCCCCcEEEEecCceeec
Q 014339 158 YQKDQGGSIGIILNTLWFEP 177 (426)
Q Consensus 158 ~~~~~~~~iGi~~~~~~~~p 177 (426)
..++-.||+-++.....|
T Consensus 214 --vg~~~~v~vRls~~~~~~ 231 (370)
T cd02929 214 --VGDDCAVATRFSVDELIG 231 (370)
T ss_pred --cCCCceEEEEecHHHhcC
Confidence 245667888888654433
No 75
>PTZ00445 p36-lilke protein; Provisional
Probab=31.82 E-value=68 Score=30.23 Aligned_cols=50 Identities=22% Similarity=0.372 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHcCCeEEEEeccCCCch-hHHHhhCCCCChh---------hHHHHHHHHHHHHH
Q 014339 34 HYNKLIDALLLKGIQPFVTLTQFDSPQ-EIEDKYGAWLSPE---------SQEDFGYFADICFK 87 (426)
Q Consensus 34 ~Y~~~i~~l~~~gi~P~vtL~H~dlP~-~l~~~~ggw~~~~---------~~~~f~~ya~~~~~ 87 (426)
--+.+++.|++.||+.+++ .||.-. ..+ -|||.++. ....|..+...+.+
T Consensus 30 ~~~~~v~~L~~~GIk~Va~--D~DnTlI~~H--sgG~~~~~~~~~~~~~~~tpefk~~~~~l~~ 89 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIAS--DFDLTMITKH--SGGYIDPDNDDIRVLTSVTPDFKILGKRLKN 89 (219)
T ss_pred HHHHHHHHHHHcCCeEEEe--cchhhhhhhh--cccccCCCcchhhhhccCCHHHHHHHHHHHH
Confidence 3468899999999999875 344432 122 38999997 33446666555543
No 76
>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins. The endo-beta-N-acetylglucosaminidases have a glycosyl hydrolase family 18 (GH18) catalytic domain. Some members also have an additional C-terminal glycosyl hydrolase family 20 (GH20) domain while others have an N-terminal domain of unknown function (pfam08522). Members of this family include endo-beta-N-acetylglucosaminidase S (EndoS) from Streptococcus pyogenes, EndoF1, EndoF2, EndoF3, and EndoH from Flavobacterium meningosepticum, and EndoE from Enterococcus faecalis. EndoS is a secreted endoglycosidase from Streptococcus pyogenes that specifically hydrolyzes the glycan on human IgG between two core N-acetylglucosamine residues. EndoE is a secreted endoglycosidase, encoded by the ndoE gene in Enterococcus faecalis, that hydrolyzes the glycan on human RNase B.
Probab=31.18 E-value=1.6e+02 Score=27.93 Aligned_cols=60 Identities=15% Similarity=0.219 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHHHHHHHHHHHhC-CceeE
Q 014339 32 INHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFG-DRVKY 95 (426)
Q Consensus 32 l~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~ya~~~~~~fg-~~V~~ 95 (426)
++...+.|..|+++|++.++++--+.....+ ....+++..+.|++-+..++++|| |.|++
T Consensus 50 ~~~~~~~i~~l~~kG~KVl~sigg~~~~~~~----~~~~~~~~~~~fa~~l~~~v~~yglDGiDi 110 (255)
T cd06542 50 LTNKETYIRPLQAKGTKVLLSILGNHLGAGF----ANNLSDAAAKAYAKAIVDTVDKYGLDGVDF 110 (255)
T ss_pred hHHHHHHHHHHhhCCCEEEEEECCCCCCCCc----cccCCHHHHHHHHHHHHHHHHHhCCCceEE
Confidence 4667799999999999999999766554322 012455555666666666666665 33443
No 77
>PF11775 CobT_C: Cobalamin biosynthesis protein CobT VWA domain
Probab=30.94 E-value=1.4e+02 Score=28.13 Aligned_cols=67 Identities=9% Similarity=0.138 Sum_probs=42.8
Q ss_pred ccChHHHHHHHHHHHHHcCCCC-EEEeecCCcCCCCCCCCCCCccCcHhHHHHHHHHHHHHHHHHH--cCCCEEEEEe
Q 014339 290 NVYPQGMWKIIKYIKERYKNTP-MFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVR--DGADVRGYFV 364 (426)
Q Consensus 290 ~i~P~gl~~~L~~~~~rY~~~P-I~ITENG~~~~~~~~~~~~~~v~D~~Ri~yl~~~l~~v~~Ai~--dGv~V~GY~~ 364 (426)
.++-+.|..+..++..|=.... ++|---|.+.++.. -...-.+||..||.+|.+.|+ .+|.+.|.=.
T Consensus 116 niDGeAl~~a~~rL~~r~e~rkiLiViSDG~P~d~st--------~~~n~~~~L~~HLr~vi~~ie~~~~Vel~aiGI 185 (219)
T PF11775_consen 116 NIDGEALRWAAERLLARPEQRKILIVISDGAPADDST--------LSANDGDYLDAHLRQVIAEIETRSDVELIAIGI 185 (219)
T ss_pred CCcHHHHHHHHHHHHcCCccceEEEEEeCCCcCcccc--------cccCChHHHHHHHHHHHHHHhccCCcEEEEEEc
Confidence 3555666666666655532223 55666677654321 123456799999999999997 4788887543
No 78
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=30.58 E-value=2.7e+02 Score=27.01 Aligned_cols=62 Identities=19% Similarity=0.196 Sum_probs=43.7
Q ss_pred CCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHHHHHHHHHHHhCCceeEEEec
Q 014339 24 FGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTI 99 (426)
Q Consensus 24 ~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~ya~~~~~~fg~~V~~w~t~ 99 (426)
.|++|+++++ ++|+.|.+.|+.-++.+=+-+ -+ ..-+.+...+..+.+.+.-++++..+.-.
T Consensus 13 ~g~iD~~~~~---~~i~~l~~~Gv~Gi~~~GstG----------E~-~~Ls~~Er~~~~~~~~~~~~~~~~vi~gv 74 (285)
T TIGR00674 13 DGSVDFAALE---KLIDFQIENGTDAIVVVGTTG----------ES-PTLSHEEHKKVIEFVVDLVNGRVPVIAGT 74 (285)
T ss_pred CCCcCHHHHH---HHHHHHHHcCCCEEEECccCc----------cc-ccCCHHHHHHHHHHHHHHhCCCCeEEEeC
Confidence 3999999876 999999999999998774411 11 12224566667777777777777765543
No 79
>PLN00196 alpha-amylase; Provisional
Probab=30.47 E-value=60 Score=33.84 Aligned_cols=56 Identities=16% Similarity=0.261 Sum_probs=36.3
Q ss_pred CcccCCCeEEeccccccccccCCC----CCCCh---HHHHHHHHHHHHHHHcCCeEEEE--eccC
Q 014339 1 MESLGVNSYRFSISWARILPKGRF----GDVNS---EGINHYNKLIDALLLKGIQPFVT--LTQF 56 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~~----g~~n~---~gl~~Y~~~i~~l~~~gi~P~vt--L~H~ 56 (426)
|++||+++.=++-...-.-+.|.. -.+|. -..+=+++||++|.++||++|+. +.|-
T Consensus 53 L~~LGvtaIWL~P~~~s~s~hGY~~~D~y~ld~~~fGt~~elk~Lv~~aH~~GIkVilDvV~NH~ 117 (428)
T PLN00196 53 IAAAGITHVWLPPPSHSVSEQGYMPGRLYDLDASKYGNEAQLKSLIEAFHGKGVQVIADIVINHR 117 (428)
T ss_pred HHHcCCCEEEeCCCCCCCCCCCCCccccCCCCcccCCCHHHHHHHHHHHHHCCCEEEEEECccCc
Confidence 578999998888765544333320 01221 01234789999999999999997 4563
No 80
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate. XylS has been characterized in Sulfolobus solfataricus where it hydrolyzes isoprimeverose, the p-nitrophenyl-beta derivative of isoprimeverose, and xyloglucan oligosaccharides, and has transxylosidic activity. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The XylS family corresponds to subgroup 3 in the Ernst et al classification of GH31 enzymes.
Probab=29.66 E-value=2.4e+02 Score=27.96 Aligned_cols=70 Identities=14% Similarity=0.226 Sum_probs=45.5
Q ss_pred HHHHHHHHHHcCCeEEEEeccC---CCchhHH--Hh---------------------hCCCCChhhHHHHHHHHHHHHHH
Q 014339 35 YNKLIDALLLKGIQPFVTLTQF---DSPQEIE--DK---------------------YGAWLSPESQEDFGYFADICFKS 88 (426)
Q Consensus 35 Y~~~i~~l~~~gi~P~vtL~H~---dlP~~l~--~~---------------------~ggw~~~~~~~~f~~ya~~~~~~ 88 (426)
-+++|++|.++|++.++.+.-+ +.+..-+ ++ .--|+||++.++|.+..+..+..
T Consensus 68 p~~mi~~L~~~G~kv~~~i~P~v~~~~~~y~e~~~~g~~v~~~~g~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~ 147 (319)
T cd06591 68 PKAMVRELHEMNAELMISIWPTFGPETENYKEMDEKGYLIKTDRGPRVTMQFGGNTRFYDATNPEAREYYWKQLKKNYYD 147 (319)
T ss_pred HHHHHHHHHHCCCEEEEEecCCcCCCChhHHHHHHCCEEEEcCCCCeeeeeCCCCccccCCCCHHHHHHHHHHHHHHhhc
Confidence 3589999999999988876433 1221100 00 01256888888887665554544
Q ss_pred hCCceeEEEeccCchhh
Q 014339 89 FGDRVKYWFTINEPNMQ 105 (426)
Q Consensus 89 fg~~V~~w~t~NEP~~~ 105 (426)
.|= --+|+=+|||..+
T Consensus 148 ~Gv-dg~w~D~~Ep~~~ 163 (319)
T cd06591 148 KGV-DAWWLDAAEPEYS 163 (319)
T ss_pred CCC-cEEEecCCCCCcc
Confidence 443 6689999999754
No 81
>PLN02361 alpha-amylase
Probab=29.29 E-value=88 Score=32.35 Aligned_cols=53 Identities=13% Similarity=0.223 Sum_probs=33.7
Q ss_pred CcccCCCeEEeccccccccccCCC----CCCChH--HHHHHHHHHHHHHHcCCeEEEEe
Q 014339 1 MESLGVNSYRFSISWARILPKGRF----GDVNSE--GINHYNKLIDALLLKGIQPFVTL 53 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~~----g~~n~~--gl~~Y~~~i~~l~~~gi~P~vtL 53 (426)
|++||+++.=++-...-.-+.|.. -.+|.. ..+=++++|++|.++||++|+.+
T Consensus 38 l~~lG~t~iwl~P~~~~~~~~GY~~~d~y~~~~~~Gt~~el~~li~~~h~~gi~vi~D~ 96 (401)
T PLN02361 38 LAKSGFTSAWLPPPSQSLAPEGYLPQNLYSLNSAYGSEHLLKSLLRKMKQYNVRAMADI 96 (401)
T ss_pred HHHcCCCEEEeCCCCcCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 578888888777665443333310 011111 12347799999999999999864
No 82
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase. Orthologs of KIA1161 are found in eukaryotes and prokaryotes. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=29.06 E-value=1.4e+02 Score=29.36 Aligned_cols=94 Identities=18% Similarity=0.212 Sum_probs=60.0
Q ss_pred CCeEEeccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCc---hhHH---------HhhC------
Q 014339 6 VNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSP---QEIE---------DKYG------ 67 (426)
Q Consensus 6 ~~~yRfsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP---~~l~---------~~~g------ 67 (426)
++++=+.+.|..-. +. =.+|++-.---.++|++|.+.|+++++.+.=+-.+ ..-+ +.-|
T Consensus 46 ~d~i~iD~~w~~~~--g~-f~~d~~~FPdp~~mi~~l~~~G~k~~l~i~P~i~~~s~~~~e~~~~g~~vk~~~g~~~~~~ 122 (303)
T cd06592 46 NGQIEIDDNWETCY--GD-FDFDPTKFPDPKGMIDQLHDLGFRVTLWVHPFINTDSENFREAVEKGYLVSEPSGDIPALT 122 (303)
T ss_pred CCeEEeCCCccccC--Cc-cccChhhCCCHHHHHHHHHHCCCeEEEEECCeeCCCCHHHHhhhhCCeEEECCCCCCCccc
Confidence 45666667774321 10 12333322224589999999999999876544221 1110 0101
Q ss_pred -------C---CCChhhHHHHHHHHHHHHHHhCCceeEEEeccCch
Q 014339 68 -------A---WLSPESQEDFGYFADICFKSFGDRVKYWFTINEPN 103 (426)
Q Consensus 68 -------g---w~~~~~~~~f~~ya~~~~~~fg~~V~~w~t~NEP~ 103 (426)
+ ++||++.++|.+..+.+....|= --+|+=+|||.
T Consensus 123 ~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~~Gv-dg~w~D~~E~~ 167 (303)
T cd06592 123 RWWNGTAAVLDFTNPEAVDWFLSRLKSLQEKYGI-DSFKFDAGEAS 167 (303)
T ss_pred ceecCCcceEeCCCHHHHHHHHHHHHHHHHHhCC-cEEEeCCCCcc
Confidence 1 67899999999999888877764 66789999996
No 83
>PF05089 NAGLU: Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain; InterPro: IPR024733 Alpha-N-acetylglucosaminidase is a lysosomal enzyme that is required for the stepwise degradation of heparan sulphate []. Mutations on the alpha-N-acetylglucosaminidase gene can lead to mucopolysaccharidosis type IIIB (MPS IIIB; or Sanfilippo syndrome type B), characterised by neurological dysfunction but relatively mild somatic manifestations []. Alpha-N-acetylglucosaminidase is composed of three domains. This entry represents the central domain, which has a tim barrel fold [].; PDB: 4A4A_A 2VC9_A 2VCC_A 2VCB_A 2VCA_A.
Probab=28.90 E-value=1.4e+02 Score=30.16 Aligned_cols=66 Identities=24% Similarity=0.460 Sum_probs=38.0
Q ss_pred HHHHHHHHHHcCCeEEEEeccCCCchhHHHhh--------CC--------CCChhhHHHHHHHHHHHH----HHhCCcee
Q 014339 35 YNKLIDALLLKGIQPFVTLTQFDSPQEIEDKY--------GA--------WLSPESQEDFGYFADICF----KSFGDRVK 94 (426)
Q Consensus 35 Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~--------gg--------w~~~~~~~~f~~ya~~~~----~~fg~~V~ 94 (426)
=+++++++|+.||+|++-=|-=-.|..|.+++ |. |+.|.. ..|++.++... +.|| .-+
T Consensus 97 q~kIl~RmreLGm~PVLPaF~G~VP~~~~~~~P~a~i~~~~~W~~f~~~~~L~P~d-plF~~i~~~F~~~q~~~yG-~~~ 174 (333)
T PF05089_consen 97 QKKILDRMRELGMTPVLPAFAGHVPRAFKRKYPNANITRQGNWNGFCRPYFLDPTD-PLFAEIAKLFYEEQIKLYG-TDH 174 (333)
T ss_dssp HHHHHHHHHHHT-EEEEE--S-EE-TTHHHHSTT--EE---EETTEE--EEE-SS---HHHHHHHHHHHHHHHHH----S
T ss_pred HHHHHHHHHHcCCcccCCCcCCCCChHHHhcCCCCEEeeCCCcCCCCCCceeCCCC-chHHHHHHHHHHHHHHhcC-CCc
Confidence 47999999999999999877666788887754 22 334432 46666665544 6788 344
Q ss_pred EEE--eccCc
Q 014339 95 YWF--TINEP 102 (426)
Q Consensus 95 ~w~--t~NEP 102 (426)
++. +|||-
T Consensus 175 ~Y~~D~FnE~ 184 (333)
T PF05089_consen 175 IYAADPFNEG 184 (333)
T ss_dssp EEE--TTTTS
T ss_pred eeCCCccCCC
Confidence 443 67874
No 84
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=28.26 E-value=2.8e+02 Score=26.72 Aligned_cols=61 Identities=18% Similarity=0.233 Sum_probs=43.5
Q ss_pred CCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHHHHHHHHHHHhCCceeEEEe
Q 014339 24 FGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFT 98 (426)
Q Consensus 24 ~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~ya~~~~~~fg~~V~~w~t 98 (426)
+|.+|+++++ ++|+.|.+.|+.-++.+=+- |- -..-+.+...+..+.+.++-++++...+-
T Consensus 15 dg~iD~~~~~---~~i~~l~~~Gv~gl~v~Gst----------GE-~~~lt~~Er~~l~~~~~~~~~~~~~vi~g 75 (284)
T cd00950 15 DGSVDFDALE---RLIEFQIENGTDGLVVCGTT----------GE-SPTLSDEEHEAVIEAVVEAVNGRVPVIAG 75 (284)
T ss_pred CCCcCHHHHH---HHHHHHHHcCCCEEEECCCC----------cc-hhhCCHHHHHHHHHHHHHHhCCCCcEEec
Confidence 3899999876 99999999999999877331 11 12233566777788888887777775443
No 85
>PF04914 DltD_C: DltD C-terminal region; InterPro: IPR006998 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the C-terminal region of DltD.; PDB: 3BMA_C.
Probab=28.10 E-value=2.2e+02 Score=24.52 Aligned_cols=54 Identities=20% Similarity=0.200 Sum_probs=35.4
Q ss_pred HHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHHHHHHHHHHHhCCc
Q 014339 35 YNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDR 92 (426)
Q Consensus 35 Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~ya~~~~~~fg~~ 92 (426)
..-+++.|++.|++|++.+.= -.+.|.. +-| ++++..+.|.+=.+..+++.|=.
T Consensus 38 l~l~L~~~k~~g~~~lfVi~P-vNg~wyd--ytG-~~~~~r~~~y~kI~~~~~~~gf~ 91 (130)
T PF04914_consen 38 LQLLLDVCKELGIDVLFVIQP-VNGKWYD--YTG-LSKEMRQEYYKKIKYQLKSQGFN 91 (130)
T ss_dssp HHHHHHHHHHTT-EEEEEE-----HHHHH--HTT---HHHHHHHHHHHHHHHHTTT--
T ss_pred HHHHHHHHHHcCCceEEEecC-CcHHHHH--HhC-CCHHHHHHHHHHHHHHHHHCCCE
Confidence 468999999999999999821 1123432 456 46777788888888888888754
No 86
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37. The gene encoding Aec37 (aec-37) is located within a genomic island (AGI-3) isolated from the extraintestinal avian pathogenic Escherichia coli strain BEN2908. The function of Aec37 and its orthologs is unknown; however, deletion of a region of the genome that includes aec-37 affects the assimilation of seven carbohydrates, decreases growth rate of the strain in minimal medium containing galacturonate or trehalose, and attenuates the virulence of E. coli BEN2908 in chickens. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=28.00 E-value=2.7e+02 Score=27.55 Aligned_cols=68 Identities=18% Similarity=0.194 Sum_probs=46.4
Q ss_pred HHHHHHHHHcCCeEEEEeccCCC---chhHH--Hh-------hC----------------CCCChhhHHHHHHHHHHHHH
Q 014339 36 NKLIDALLLKGIQPFVTLTQFDS---PQEIE--DK-------YG----------------AWLSPESQEDFGYFADICFK 87 (426)
Q Consensus 36 ~~~i~~l~~~gi~P~vtL~H~dl---P~~l~--~~-------~g----------------gw~~~~~~~~f~~ya~~~~~ 87 (426)
++||++|+++|++.++.+.-+-. |..-+ ++ -| -++||+..++|.+..+..+.
T Consensus 76 ~~mi~~L~~~g~k~~~~i~P~i~~~~~~y~e~~~~g~~v~~~~g~~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~ 155 (317)
T cd06599 76 AAFVAKFHERGIRLAPNIKPGLLQDHPRYKELKEAGAFIKPPDGREPSIGQFWGGVGSFVDFTNPEGREWWKEGVKEALL 155 (317)
T ss_pred HHHHHHHHHCCCEEEEEeCCcccCCCHHHHHHHHCCcEEEcCCCCCcceecccCCCeEeecCCChHHHHHHHHHHHHHHh
Confidence 48999999999999987765532 22110 00 00 14689999999887765555
Q ss_pred HhCCceeEEEeccCchh
Q 014339 88 SFGDRVKYWFTINEPNM 104 (426)
Q Consensus 88 ~fg~~V~~w~t~NEP~~ 104 (426)
..|- .-+|+=+|||.+
T Consensus 156 ~~Gv-dg~w~D~~E~~~ 171 (317)
T cd06599 156 DLGI-DSTWNDNNEYEI 171 (317)
T ss_pred cCCC-cEEEecCCCCcc
Confidence 5544 468999999963
No 87
>PF09713 A_thal_3526: Plant protein 1589 of unknown function (A_thal_3526); InterPro: IPR006476 This plant-specific family of proteins are defined by an uncharacterised region 57 residues in length. It is found toward the N terminus of most proteins that contain it. Examples include at least several proteins from Arabidopsis thaliana (Mouse-ear cress) and Oryza sativa (Rice). The function of the proteins are unknown.
Probab=27.67 E-value=27 Score=25.41 Aligned_cols=36 Identities=28% Similarity=0.280 Sum_probs=24.5
Q ss_pred HHHHHHHH-HcCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHHHHH
Q 014339 36 NKLIDALL-LKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFA 82 (426)
Q Consensus 36 ~~~i~~l~-~~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~ya 82 (426)
+++++.|. .+||+|.+|.. .|-. +-.+.++.|..|-
T Consensus 16 ~E~v~~L~~~a~I~P~~T~~-----VW~~------Le~eN~eFF~aY~ 52 (54)
T PF09713_consen 16 EECVRALQKQANIEPVFTST-----VWQK------LEKENPEFFKAYY 52 (54)
T ss_pred HHHHHHHHHHcCCChHHHHH-----HHHH------HHHHCHHHHHHhh
Confidence 47888885 56999998874 4532 2355677777763
No 88
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus. Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=27.59 E-value=2.8e+02 Score=27.11 Aligned_cols=70 Identities=14% Similarity=0.186 Sum_probs=42.8
Q ss_pred HHHHHHHHHHcCCeEEEEeccCC-C-ch-h----HHHhh-----------CCCCChhhHHHHHHHHHHHHHHhCCceeEE
Q 014339 35 YNKLIDALLLKGIQPFVTLTQFD-S-PQ-E----IEDKY-----------GAWLSPESQEDFGYFADICFKSFGDRVKYW 96 (426)
Q Consensus 35 Y~~~i~~l~~~gi~P~vtL~H~d-l-P~-~----l~~~~-----------ggw~~~~~~~~f~~ya~~~~~~fg~~V~~w 96 (426)
-++||++|.++|++.++.++-.- . |. . +.... .-++||+..+.|.+-....+...|- .-+|
T Consensus 76 p~~mi~~Lh~~G~k~v~~v~P~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~D~tnp~a~~~w~~~~~~~~~~~Gi-dg~W 154 (292)
T cd06595 76 PEKLLQDLHDRGLKVTLNLHPADGIRAHEDQYPEMAKALGVDPATEGPILFDLTNPKFMDAYFDNVHRPLEKQGV-DFWW 154 (292)
T ss_pred HHHHHHHHHHCCCEEEEEeCCCcccCCCcHHHHHHHHhcCCCcccCCeEEecCCCHHHHHHHHHHHHHHHHhcCC-cEEE
Confidence 45999999999999888775331 1 11 1 21111 1356777777665444333334432 4589
Q ss_pred EeccCchhh
Q 014339 97 FTINEPNMQ 105 (426)
Q Consensus 97 ~t~NEP~~~ 105 (426)
+=+|||..+
T Consensus 155 ~D~~E~~~~ 163 (292)
T cd06595 155 LDWQQGNRT 163 (292)
T ss_pred ecCCCCccc
Confidence 999999754
No 89
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=27.38 E-value=3e+02 Score=26.72 Aligned_cols=61 Identities=20% Similarity=0.273 Sum_probs=41.6
Q ss_pred CCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHHHHHHHHHHHhCCceeEEEe
Q 014339 24 FGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFT 98 (426)
Q Consensus 24 ~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~ya~~~~~~fg~~V~~w~t 98 (426)
+|.+|.++++ ++|+.|++.|+.-++.+-+-+ + +-.++ .+...+..+.+.+.-++++...+-
T Consensus 16 dg~iD~~~l~---~~i~~l~~~Gv~gi~~~Gs~G-------E-~~~ls---~~Er~~~~~~~~~~~~~~~~vi~g 76 (292)
T PRK03170 16 DGSVDFAALR---KLVDYLIANGTDGLVVVGTTG-------E-SPTLT---HEEHEELIRAVVEAVNGRVPVIAG 76 (292)
T ss_pred CCCcCHHHHH---HHHHHHHHcCCCEEEECCcCC-------c-cccCC---HHHHHHHHHHHHHHhCCCCcEEee
Confidence 3899999876 999999999999998764311 0 11233 455566667777766777765443
No 90
>PRK00366 ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Reviewed
Probab=27.36 E-value=2e+02 Score=29.27 Aligned_cols=64 Identities=20% Similarity=0.211 Sum_probs=47.7
Q ss_pred cccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHHHHHHHH
Q 014339 17 RILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADIC 85 (426)
Q Consensus 17 RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~ya~~~ 85 (426)
||.| |.+-. --+..+.+++.++++|+--=+...|=.|+..+.++||+-+.+..++.=.++++.|
T Consensus 106 RINP----GNig~-~~~~v~~vv~~ak~~~ipIRIGvN~GSL~~~~~~~yg~~t~eamveSAl~~~~~l 169 (360)
T PRK00366 106 RINP----GNIGK-RDERVREVVEAAKDYGIPIRIGVNAGSLEKDLLEKYGEPTPEALVESALRHAKIL 169 (360)
T ss_pred EECC----CCCCc-hHHHHHHHHHHHHHCCCCEEEecCCccChHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 6767 55521 0136779999999999999999999999999999986544455666666666654
No 91
>cd06525 GH25_Lyc-like Lyc muramidase is an autolytic lysozyme (autolysin) from Clostridium acetobutylicum encoded by the lyc gene. Lyc has a glycosyl hydrolase family 25 (GH25) catalytic domain. Endo-N-acetylmuramidases are lysozymes (also referred to as peptidoglycan hydrolases) that degrade bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues.
Probab=27.21 E-value=1.3e+02 Score=27.00 Aligned_cols=29 Identities=21% Similarity=0.166 Sum_probs=23.6
Q ss_pred CCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCc
Q 014339 25 GDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSP 59 (426)
Q Consensus 25 g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP 59 (426)
+.+|+ +|..-++.++++|| .|..|||-.|
T Consensus 34 ~y~D~----~~~~~~~~a~~aGl--~~G~Yhy~~~ 62 (184)
T cd06525 34 TFVDS----YFNENYNGAKAAGL--KVGFYHFLVG 62 (184)
T ss_pred cccCH----hHHHHHHHHHHCCC--ceEEEEEeeC
Confidence 34676 68899999999999 4699998765
No 92
>TIGR01589 A_thal_3526 uncharacterized plant-specific domain TIGR01589. This model represents an uncharacterized plant-specific domain 57 residues in length. It is found toward the N-terminus of most proteins that contain it. Examples include at least 10 proteins from Arabidopsis thaliana and at least one from Oryza sativa.
Probab=27.16 E-value=41 Score=24.75 Aligned_cols=36 Identities=22% Similarity=0.220 Sum_probs=25.4
Q ss_pred HHHHHHHHH-cCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHHHHH
Q 014339 36 NKLIDALLL-KGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFA 82 (426)
Q Consensus 36 ~~~i~~l~~-~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~ya 82 (426)
+++++.|.+ +||+|.+|. ..|-+ +-.+.+|.|..|-
T Consensus 19 ~E~v~~L~~~a~I~P~~T~-----~VW~~------LekeN~eFF~aY~ 55 (57)
T TIGR01589 19 EETVSFLFENAGISPKFTR-----FVWYL------LEKENADFFRCYK 55 (57)
T ss_pred HHHHHHHHHHcCCCchhHH-----HHHHH------HHHHHHHHHHHHh
Confidence 477888876 799998876 35643 3356678888773
No 93
>cd07945 DRE_TIM_CMS Leptospira interrogans citramalate synthase (CMS) and related proteins, N-terminal catalytic TIM barrel domain. Citramalate synthase (CMS) catalyzes the conversion of pyruvate and acetyl-CoA to (R)-citramalate in the first dedicated step of the citramalate pathway. Citramalate is only found in Leptospira interrogans and a few other microorganisms. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center con
Probab=26.51 E-value=1.3e+02 Score=29.31 Aligned_cols=74 Identities=12% Similarity=0.110 Sum_probs=51.8
Q ss_pred ccCCCeEEeccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHHHHH
Q 014339 3 SLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFA 82 (426)
Q Consensus 3 ~lG~~~yRfsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~ya 82 (426)
+.|++..+++++=|...-....+.--++.++-..++|+.+++.|++..+++-+|+.|. +..++.+.+.+
T Consensus 85 ~~g~~~i~i~~~~S~~h~~~~~~~t~~e~l~~~~~~i~~a~~~G~~v~~~~~d~~~~~-----------r~~~~~~~~~~ 153 (280)
T cd07945 85 SAGAKVLNLLTKGSLKHCTEQLRKTPEEHFADIREVIEYAIKNGIEVNIYLEDWSNGM-----------RDSPDYVFQLV 153 (280)
T ss_pred HCCCCEEEEEEeCCHHHHHHHHCcCHHHHHHHHHHHHHHHHhCCCEEEEEEEeCCCCC-----------cCCHHHHHHHH
Confidence 4577777777655544332111333467788899999999999999999999887774 12257788888
Q ss_pred HHHHH
Q 014339 83 DICFK 87 (426)
Q Consensus 83 ~~~~~ 87 (426)
+.+.+
T Consensus 154 ~~~~~ 158 (280)
T cd07945 154 DFLSD 158 (280)
T ss_pred HHHHH
Confidence 88765
No 94
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=24.33 E-value=1.4e+02 Score=29.07 Aligned_cols=60 Identities=20% Similarity=0.169 Sum_probs=45.1
Q ss_pred CcccCCCeEEeccccccccccCCCCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHH
Q 014339 1 MESLGVNSYRFSISWARILPKGRFGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIED 64 (426)
Q Consensus 1 mk~lG~~~yRfsi~W~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~ 64 (426)
||++|+..+|-+..=+|--|.+.+|- .++| ++.+-+.+.+.||..+.+.++-..+..+.+
T Consensus 50 lk~~g~~~~r~~~~kpRTs~~s~~G~-g~~g---l~~l~~~~~~~Gl~~~te~~d~~~~~~l~~ 109 (266)
T PRK13398 50 LKELGVHMLRGGAFKPRTSPYSFQGL-GEEG---LKILKEVGDKYNLPVVTEVMDTRDVEEVAD 109 (266)
T ss_pred HHHcCCCEEEEeeecCCCCCCccCCc-HHHH---HHHHHHHHHHcCCCEEEeeCChhhHHHHHH
Confidence 57899999999987788877654332 2454 557777889999999999988766666653
No 95
>PF04551 GcpE: GcpE protein; InterPro: IPR004588 This protein previously of unknown biochemical function is essential in Escherichia coli. It has now been characterised as 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, which converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4CPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate in the sixth step of nonmevalonate terpenoid biosynthesis. The family is largely restricted to bacteria, where it is widely but not universally distributed. No homology can be detected between this family and other proteins.; GO: 0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity, 0016114 terpenoid biosynthetic process, 0055114 oxidation-reduction process; PDB: 2Y0F_C 3NOY_A.
Probab=24.28 E-value=1.3e+02 Score=30.49 Aligned_cols=52 Identities=15% Similarity=0.118 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHHHHHHHH
Q 014339 33 NHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADIC 85 (426)
Q Consensus 33 ~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~ya~~~ 85 (426)
+..+.+++.++++||--=+...|=.|+..+.++| |-+....++.=.++++.|
T Consensus 118 ~~~~~vv~~ake~~ipIRIGvN~GSL~~~~~~ky-~~t~~amvesA~~~~~~l 169 (359)
T PF04551_consen 118 EKVKEVVEAAKERGIPIRIGVNSGSLEKDILEKY-GPTPEAMVESALEHVRIL 169 (359)
T ss_dssp HHHHHHHHHHHHHT-EEEEEEEGGGS-HHHHHHH-CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEecccccCcHHHHhhc-cchHHHHHHHHHHHHHHH
Confidence 4667999999999999999999999999999887 334444555555566643
No 96
>PLN03153 hypothetical protein; Provisional
Probab=23.86 E-value=37 Score=36.10 Aligned_cols=19 Identities=32% Similarity=0.639 Sum_probs=15.9
Q ss_pred HHHHHcC-CeEEEEeccCCC
Q 014339 40 DALLLKG-IQPFVTLTQFDS 58 (426)
Q Consensus 40 ~~l~~~g-i~P~vtL~H~dl 58 (426)
..+++.| ++|+|+||||+.
T Consensus 325 ~G~les~p~~P~vSlHH~~~ 344 (537)
T PLN03153 325 HGLLSSHPIAPFVSIHHVEA 344 (537)
T ss_pred chHhhcCCCCCceeeeeccc
Confidence 4566776 999999999997
No 97
>PF09585 Lin0512_fam: Conserved hypothetical protein (Lin0512_fam); InterPro: IPR011719 This family consists of few members, broadly distributed. It occurs so far in several Firmicutes (twice in Oceanobacillus), one Cyanobacterium, one alpha Proteobacterium, and (with a long prefix) in plants. The function is unknown. The alignment includes a perfectly conserved motif GxGxDxHG near the N terminus.
Probab=23.69 E-value=69 Score=26.97 Aligned_cols=31 Identities=23% Similarity=0.410 Sum_probs=25.0
Q ss_pred EEEeecCCcCCCCCCCCCCCccCcHhHHHHHHHHHHHHHHHHHc
Q 014339 312 MFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVRD 355 (426)
Q Consensus 312 I~ITENG~~~~~~~~~~~~~~v~D~~Ri~yl~~~l~~v~~Ai~d 355 (426)
.+|+|.|++. |..+.+|-+.-..+++.||..
T Consensus 2 r~~iE~GmG~-------------DlhGqD~TkAA~RAv~DAI~~ 32 (113)
T PF09585_consen 2 RLFIEMGMGN-------------DLHGQDYTKAAVRAVRDAISH 32 (113)
T ss_pred eEEEEecccc-------------cccCCcHHHHHHHHHHHHHhh
Confidence 5899999986 456778888888888888863
No 98
>PF05404 TRAP-delta: Translocon-associated protein, delta subunit precursor (TRAP-delta); InterPro: IPR008855 This family consists of several eukaryotic translocon-associated protein, delta subunit precursors (TRAP-delta or SSR-delta). The exact function of this protein is unknown [].; GO: 0005783 endoplasmic reticulum, 0016021 integral to membrane
Probab=22.86 E-value=71 Score=28.80 Aligned_cols=65 Identities=25% Similarity=0.457 Sum_probs=42.1
Q ss_pred EEeccccccccccCCCCC-----CChHHHHHHHHHHHHHHH----cCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHH
Q 014339 9 YRFSISWARILPKGRFGD-----VNSEGINHYNKLIDALLL----KGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFG 79 (426)
Q Consensus 9 yRfsi~W~RI~P~~~~g~-----~n~~gl~~Y~~~i~~l~~----~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~ 79 (426)
=|+-+||..=-.+...|. +|++|..-|++ ++|. ..++|+.|+-. ++|... + |-|.+.|++..+.
T Consensus 78 nkYQVSW~~e~k~a~sG~y~V~~fDEegyaalrK---A~R~ged~~~vkplftV~v-~h~Ga~--~-gpwV~sE~lA~~~ 150 (167)
T PF05404_consen 78 NKYQVSWTEEHKKASSGTYEVKFFDEEGYAALRK---AQRNGEDVSSVKPLFTVTV-NHPGAY--K-GPWVNSEFLAALL 150 (167)
T ss_pred CceEEEEEechhhccCCceEEEEeChHHHHHHHH---HhhcCCCcccCCccEEEEE-ecCccc--c-CCCchHHHHHHHH
Confidence 467788865433332243 69998775554 4454 67999887654 556543 2 8899988887665
Q ss_pred H
Q 014339 80 Y 80 (426)
Q Consensus 80 ~ 80 (426)
.
T Consensus 151 ~ 151 (167)
T PF05404_consen 151 A 151 (167)
T ss_pred H
Confidence 4
No 99
>TIGR02058 lin0512_fam conserved hypothetical protein. This family consists of few members, broadly distributed. It occurs so far in several Firmicutes (twice in Oceanobacillus), one Cyanobacterium, one alpha Proteobacterium, and (with a long prefix) in plants. The function is unknown. The alignment includes a perfectly conserved motif GxGxDxHG near the N-terminus.
Probab=22.80 E-value=77 Score=26.81 Aligned_cols=30 Identities=20% Similarity=0.296 Sum_probs=24.7
Q ss_pred EEEeecCCcCCCCCCCCCCCccCcHhHHHHHHHHHHHHHHHHH
Q 014339 312 MFITENGYGEICMPNSSTEDLLNDVKRVEYMASYLDALITAVR 354 (426)
Q Consensus 312 I~ITENG~~~~~~~~~~~~~~v~D~~Ri~yl~~~l~~v~~Ai~ 354 (426)
.+|+|.|++. |..+.+|-+.-..+++.||.
T Consensus 2 rl~iEmGmG~-------------DlhGqD~TkAA~RAvrDAI~ 31 (116)
T TIGR02058 2 ILFIEMGMGV-------------DQHGQNITKAAMRAVRNAIA 31 (116)
T ss_pred eEEEEecccc-------------cccCccHHHHHHHHHHHHHh
Confidence 5899999986 56777888888888888885
No 100
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=22.67 E-value=1.1e+02 Score=29.67 Aligned_cols=26 Identities=27% Similarity=0.447 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHcCCCCEEEeecCCcCCC
Q 014339 295 GMWKIIKYIKERYKNTPMFITENGYGEIC 323 (426)
Q Consensus 295 gl~~~L~~~~~rY~~~PI~ITENG~~~~~ 323 (426)
||--++-+ .++ +.|++|||+|+=..+
T Consensus 185 gl~g~~~k--~~~-g~P~lLTEHGIY~RE 210 (268)
T PF11997_consen 185 GLLGALAK--YRY-GRPFLLTEHGIYTRE 210 (268)
T ss_pred HHHHHHHH--HHh-CCCEEEecCCccHHH
Confidence 56655543 356 489999999996654
No 101
>PRK13523 NADPH dehydrogenase NamA; Provisional
Probab=22.48 E-value=7.9e+02 Score=24.60 Aligned_cols=124 Identities=16% Similarity=0.093 Sum_probs=71.6
Q ss_pred CCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchh----------HHHhhC-----CCC---ChhhHHHHHHHHHHHH
Q 014339 25 GDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQE----------IEDKYG-----AWL---SPESQEDFGYFADICF 86 (426)
Q Consensus 25 g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~----------l~~~~g-----gw~---~~~~~~~f~~ya~~~~ 86 (426)
+-.+.+-+..++++.+.+.++|-..++=|+|.+.=.. ...... ..+ =.++++.|++=|+.+.
T Consensus 73 ~~~~d~~i~~~r~l~d~vh~~G~~i~~QL~H~G~~~~~~~~~~~ps~~~~~~~~~~p~~mt~eeI~~ii~~f~~aA~~a~ 152 (337)
T PRK13523 73 GIWDDEHIEGLHKLVTFIHDHGAKAAIQLAHAGRKAELEGDIVAPSAIPFDEKSKTPVEMTKEQIKETVLAFKQAAVRAK 152 (337)
T ss_pred ecCCHHHHHHHHHHHHHHHhcCCEEEEEccCCCCCCCCCCCccCCCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 4568889999999999999999999999999654110 000000 011 1367788888777766
Q ss_pred HHhCCceeEEEeccCchhhhhhccccCCC-CCC--CCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 014339 87 KSFGDRVKYWFTINEPNMQVTLSYRLGCH-PPA--HCSQPFGNCSQGNSEEEPFIAAHNLILSHATAVDIYRTKYQKDQG 163 (426)
Q Consensus 87 ~~fg~~V~~w~t~NEP~~~~~~gy~~G~~-pPg--~~~~~~~~~~~~~~~~~~~~~~h~~l~Aha~a~~~~~~~~~~~~~ 163 (426)
+.==|-|.. -+-.||+...| -|. .+... .+| | +-|-++--.+.++.+|+. . +
T Consensus 153 ~aGfDgVei---------h~ahGyLl~qFlSp~~N~RtD~----yGG-s-------lenR~Rf~~eii~~ir~~---~-~ 207 (337)
T PRK13523 153 EAGFDVIEI---------HGAHGYLINEFLSPLSNKRTDE----YGG-S-------PENRYRFLREIIDAVKEV---W-D 207 (337)
T ss_pred HcCCCEEEE---------ccccchHHHHhcCCccCCcCCC----CCC-C-------HHHHHHHHHHHHHHHHHh---c-C
Confidence 531144543 34567776665 232 12111 111 1 224444444556667764 2 4
Q ss_pred CcEEEEecCc
Q 014339 164 GSIGIILNTL 173 (426)
Q Consensus 164 ~~iGi~~~~~ 173 (426)
..||+-++..
T Consensus 208 ~~v~vRis~~ 217 (337)
T PRK13523 208 GPLFVRISAS 217 (337)
T ss_pred CCeEEEeccc
Confidence 5677777754
No 102
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=22.35 E-value=4.7e+02 Score=25.00 Aligned_cols=63 Identities=17% Similarity=0.292 Sum_probs=43.8
Q ss_pred CCCCChHHHHHHHHHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCChhhHHHHHHHHHHHHHHhCCceeEEEecc
Q 014339 24 FGDVNSEGINHYNKLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSPESQEDFGYFADICFKSFGDRVKYWFTIN 100 (426)
Q Consensus 24 ~g~~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~~~~~~~f~~ya~~~~~~fg~~V~~w~t~N 100 (426)
+|.+|+++++ ++|+.|++.|+.-++.+=+- |-+ ..-+.+...+.++.+.+.-+++++..+-..
T Consensus 12 dg~iD~~~~~---~~i~~l~~~Gv~gi~~~Gst----------GE~-~~ls~~Er~~l~~~~~~~~~~~~~vi~gv~ 74 (281)
T cd00408 12 DGEVDLDALR---RLVEFLIEAGVDGLVVLGTT----------GEA-PTLTDEERKEVIEAVVEAVAGRVPVIAGVG 74 (281)
T ss_pred CCCcCHHHHH---HHHHHHHHcCCCEEEECCCC----------ccc-ccCCHHHHHHHHHHHHHHhCCCCeEEEecC
Confidence 3899999866 99999999999998877431 111 112245667777777777777787655443
No 103
>PRK13516 gamma-glutamyl:cysteine ligase; Provisional
Probab=21.56 E-value=85 Score=32.12 Aligned_cols=83 Identities=14% Similarity=0.163 Sum_probs=59.4
Q ss_pred cccCCCeEEeccccccccccCCCCC-CChHHHHHHHHHHHHHHHcCCeEEEEeccCCC-chhHHHhhC--------CCCC
Q 014339 2 ESLGVNSYRFSISWARILPKGRFGD-VNSEGINHYNKLIDALLLKGIQPFVTLTQFDS-PQEIEDKYG--------AWLS 71 (426)
Q Consensus 2 k~lG~~~yRfsi~W~RI~P~~~~g~-~n~~gl~~Y~~~i~~l~~~gi~P~vtL~H~dl-P~~l~~~~g--------gw~~ 71 (426)
++.|+.++| +.-|.+ +|.. |. .-....+.|++.++.|.+.|+-.=..-.+||. |.- ++| .=.+
T Consensus 174 ~dTG~~S~R-~~~~~~-~P~~--G~pp~~~~~~~y~~~~~~l~~~G~i~d~~~~~WdvRp~~---~~~TvEiRv~D~~~~ 246 (373)
T PRK13516 174 VDTGFASAR-LNSVSA-FPLS--GRAPFVLNWQEFEAYFRKMSYTGVIDSMKDFYWDIRPKP---EFGTVEVRVMDTPLT 246 (373)
T ss_pred cCCcchhHH-HHHHhc-CCCC--CCCCCcCCHHHHHHHHHHHHHcCCcCCCCeeEEEeccCC---CCCCeEEecCCCCCC
Confidence 468999999 556666 4543 32 12233457999999999999988888888886 432 222 3456
Q ss_pred hhhHHHHHHHHHHHHHHhCC
Q 014339 72 PESQEDFGYFADICFKSFGD 91 (426)
Q Consensus 72 ~~~~~~f~~ya~~~~~~fg~ 91 (426)
.+-.-.++.|++.+++.+-.
T Consensus 247 ~~~~~~iaal~~alv~~~~~ 266 (373)
T PRK13516 247 LERAAAIAAYIQALARWLLT 266 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 77778899999999988843
No 104
>PRK05402 glycogen branching enzyme; Provisional
Probab=21.19 E-value=2.9e+02 Score=30.91 Aligned_cols=57 Identities=14% Similarity=0.097 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHcCCeEEEEe--ccCCCc-----------hhHHH-----hhC-------CCCChhhHHHHHHHHHHHHHH
Q 014339 34 HYNKLIDALLLKGIQPFVTL--TQFDSP-----------QEIED-----KYG-------AWLSPESQEDFGYFADICFKS 88 (426)
Q Consensus 34 ~Y~~~i~~l~~~gi~P~vtL--~H~dlP-----------~~l~~-----~~g-------gw~~~~~~~~f~~ya~~~~~~ 88 (426)
=.+++|++|-++||+.|+.+ .|+... .+... .+. .+.++++.+.+.+-++.-+++
T Consensus 316 dfk~lV~~~H~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~y~~~~~~~~~~~~w~~~~~n~~~~~v~~~l~~~~~~W~~e 395 (726)
T PRK05402 316 DFRYFVDACHQAGIGVILDWVPAHFPKDAHGLARFDGTALYEHADPREGEHPDWGTLIFNYGRNEVRNFLVANALYWLEE 395 (726)
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCCCccchhccCCCcceeccCCcCCccCCCCCccccCCCHHHHHHHHHHHHHHHHH
Confidence 36799999999999999984 465221 11110 011 234678888888888888887
Q ss_pred hC
Q 014339 89 FG 90 (426)
Q Consensus 89 fg 90 (426)
|+
T Consensus 396 ~~ 397 (726)
T PRK05402 396 FH 397 (726)
T ss_pred hC
Confidence 75
No 105
>PRK08255 salicylyl-CoA 5-hydroxylase; Reviewed
Probab=20.66 E-value=1.2e+03 Score=26.10 Aligned_cols=143 Identities=16% Similarity=0.165 Sum_probs=81.1
Q ss_pred ccccccCCCCCCChHHHHHHHHHHHHHHHc-CCeEEEEeccCCC-----chhHHH----hhCCCC---------------
Q 014339 16 ARILPKGRFGDVNSEGINHYNKLIDALLLK-GIQPFVTLTQFDS-----PQEIED----KYGAWL--------------- 70 (426)
Q Consensus 16 ~RI~P~~~~g~~n~~gl~~Y~~~i~~l~~~-gi~P~vtL~H~dl-----P~~l~~----~~ggw~--------------- 70 (426)
+|+.|... |-+|.+-++-++++++.+.++ |-..++=|.|-+- +.|... ..|||.
T Consensus 459 g~~~~~~~-~~~~d~~i~~~~~~~~~vh~~gg~~i~~QL~h~Gr~~~~~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~ 537 (765)
T PRK08255 459 GRITPGCP-GLYNDEQEAAWKRIVDFVHANSDAKIGIQLGHSGRKGSTRLGWEGIDEPLEEGNWPLISASPLPYLPGSQV 537 (765)
T ss_pred cCCCCCCC-ccCCHHHHHHHHHHHHHHHhcCCceEEEEccCCcccccccccccccccccccCCCceeCCCCCcCCCCCCC
Confidence 45555543 778999999999999999999 6999999999422 111100 012331
Q ss_pred --------ChhhHHHHHHHHHHHHHHhC-CceeEEEeccCchhhhhhccccCCC-CCC---CCCCCCCCCCCCCCCchHH
Q 014339 71 --------SPESQEDFGYFADICFKSFG-DRVKYWFTINEPNMQVTLSYRLGCH-PPA---HCSQPFGNCSQGNSEEEPF 137 (426)
Q Consensus 71 --------~~~~~~~f~~ya~~~~~~fg-~~V~~w~t~NEP~~~~~~gy~~G~~-pPg---~~~~~~~~~~~~~~~~~~~ 137 (426)
=.++++.|++=|+.+.+ -| |-|.. -+-.||+...| -|- +.+. . |-|
T Consensus 538 p~~mt~~eI~~~i~~f~~aA~~a~~-aGfDgvei---------h~ahGyLl~qFlsp~~N~RtD~-----y-GGs----- 596 (765)
T PRK08255 538 PREMTRADMDRVRDDFVAAARRAAE-AGFDWLEL---------HCAHGYLLSSFISPLTNQRTDE-----Y-GGS----- 596 (765)
T ss_pred CCcCCHHHHHHHHHHHHHHHHHHHH-cCCCEEEE---------ecccchHHHHhcCCCCCCCCCC-----C-CCC-----
Confidence 12367778777766554 34 44432 34567776654 232 1110 0 111
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCcEEEEecCceeecCCCCHHH
Q 014339 138 IAAHNLILSHATAVDIYRTKYQKDQGGSIGIILNTLWFEPISSSTAD 184 (426)
Q Consensus 138 ~~~h~~l~Aha~a~~~~~~~~~~~~~~~iGi~~~~~~~~p~~~~~~d 184 (426)
+-|.++--.+.++++|+. ..++-.||+-++...+.+.....++
T Consensus 597 --lenR~r~~~eiv~~ir~~--~~~~~~v~~ri~~~~~~~~g~~~~~ 639 (765)
T PRK08255 597 --LENRLRYPLEVFRAVRAV--WPAEKPMSVRISAHDWVEGGNTPDD 639 (765)
T ss_pred --HHHHhHHHHHHHHHHHHh--cCCCCeeEEEEccccccCCCCCHHH
Confidence 224455455667777774 2345578888886544433333443
No 106
>PF02057 Glyco_hydro_59: Glycosyl hydrolase family 59; InterPro: IPR001286 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 59 GH59 from CAZY comprises enzymes with only one known activity; galactocerebrosidase (3.2.1.46 from EC). Globoid cell leukodystrophy (Krabbe disease) is a severe, autosomal recessive disorder that results from deficiency of galactocerebrosidase (GALC) activity [, , ]. GALC is responsible for the lysosomal catabolism of certain galactolipids, including galactosylceramide and psychosine [].; GO: 0004336 galactosylceramidase activity, 0006683 galactosylceramide catabolic process; PDB: 3ZR6_A 3ZR5_A.
Probab=20.32 E-value=1.8e+02 Score=32.12 Aligned_cols=64 Identities=14% Similarity=0.016 Sum_probs=38.7
Q ss_pred HHHHHHHHcCCeEEEEeccCCCchhHHHhhCCCCCh-----hhHHHHHHHHHHHHHHhCCceeEEEeccCch
Q 014339 37 KLIDALLLKGIQPFVTLTQFDSPQEIEDKYGAWLSP-----ESQEDFGYFADICFKSFGDRVKYWFTINEPN 103 (426)
Q Consensus 37 ~~i~~l~~~gi~P~vtL~H~dlP~~l~~~~ggw~~~-----~~~~~f~~ya~~~~~~fg~~V~~w~t~NEP~ 103 (426)
-|+.+.++++=..-+....|..|.|+. .||..+ .++....++..-|.+.+|=.++|-=.+||=.
T Consensus 116 ~L~~eAKkrNP~ikl~~L~W~~PgW~~---~g~~~~~~~~~~~a~Y~~~wl~ga~~~~gl~idYvg~~NEr~ 184 (669)
T PF02057_consen 116 WLMAEAKKRNPNIKLYGLPWGFPGWVG---NGWNWPYDNPQLTAYYVVSWLLGAKKTHGLDIDYVGIWNERG 184 (669)
T ss_dssp HHHHHHHHH-TT-EEEEEES-B-GGGG---TTSS-TTSSHHHHHHHHHHHHHHHHHHH-----EE-S-TTS-
T ss_pred hhHHHHHhhCCCCeEEEeccCCCcccc---CCCCCcccchhhhhHHHHHHHHHHHHHhCCCceEechhhccC
Confidence 488899998877777888999999996 455442 3445556777778899998888888889853
Done!