Query 014340
Match_columns 426
No_of_seqs 156 out of 683
Neff 7.1
Searched_HMMs 13730
Date Mon Mar 25 09:48:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014340.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014340hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1v54g_ f.23.2.1 (G:) Mitochon 22.3 25 0.0018 25.3 2.6 22 401-422 15-36 (84)
2 d1eg3a2 a.39.1.7 (A:210-306) D 20.9 69 0.005 23.5 5.0 51 74-124 3-76 (97)
3 d1duxc_ a.4.5.21 (C:) Elk-1 {H 20.6 39 0.0028 24.3 3.4 41 340-385 27-67 (86)
4 d1yo5c1 a.4.5.21 (C:247-334) S 16.2 44 0.0032 24.2 2.8 36 346-386 36-71 (88)
5 d2qapa1 c.1.10.1 (A:1-357) Fru 15.6 14 0.001 33.9 -0.2 58 334-395 103-163 (357)
6 d1zaia1 c.1.10.1 (A:1-363) Fru 15.1 12 0.00088 34.5 -0.9 56 334-394 94-152 (363)
7 d1qo5a_ c.1.10.1 (A:) Fructose 12.4 16 0.0012 33.5 -0.8 56 334-394 94-152 (360)
8 d2outa1 a.140.3.2 (A:94-131) U 11.9 40 0.0029 19.6 1.2 16 259-274 6-21 (38)
9 d1v8ca2 d.129.5.1 (A:88-165) M 10.7 46 0.0034 22.5 1.3 11 284-294 49-59 (78)
10 d1awca_ a.4.5.21 (A:) GA bindi 10.6 48 0.0035 25.0 1.5 62 345-411 31-94 (110)
No 1
>d1v54g_ f.23.2.1 (G:) Mitochondrial cytochrome c oxidase subunit VIa {Cow (Bos taurus) [TaxId: 9913]}
Probab=22.34 E-value=25 Score=25.33 Aligned_cols=22 Identities=14% Similarity=0.261 Sum_probs=18.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHH
Q 014340 401 PWASISVIAAVILLLLTSIQTV 422 (426)
Q Consensus 401 pW~~is~vaA~~ll~lt~~QTv 422 (426)
-|+.||+++|+-.++++.+.++
T Consensus 15 lWkkis~~va~P~i~l~~~n~~ 36 (84)
T d1v54g_ 15 TWRFLTFGLALPSVALCTLNSW 36 (84)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4888999999988888888775
No 2
>d1eg3a2 a.39.1.7 (A:210-306) Dystrophin {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.91 E-value=69 Score=23.47 Aligned_cols=51 Identities=22% Similarity=0.303 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHhh-----hHHHHHHHHHH---------------HHHHHHHhhccc---cCCCChHHHHHHH
Q 014340 74 EHKKRYLKCFLQRTK-----VRIASFLGFIK---------------AREAELRNCYAE---TIHLGSDEFIKMV 124 (426)
Q Consensus 74 ~~K~~~l~~~l~r~~-----~~l~~~~~~i~---------------~~e~~aR~cY~e---~~~~~~~eF~~Mm 124 (426)
+.|.||+-+.+..++ ..++.++..+. .+|..+|+|+.. .-+++.++|++-|
T Consensus 3 ~dKyRYlF~qisd~~g~~~~~kl~~lL~d~lqlP~~vgE~~sFG~s~ie~sv~sCF~~~~~~~~i~~~~FL~wl 76 (97)
T d1eg3a2 3 EDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIEAALFLDWM 76 (97)
T ss_dssp HHHHHHHHHHHSCTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHTTTCSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHhCcccccCCCcchHHHHHHHhccCCCCcccHHHHHHHH
Confidence 358999988886543 23554444332 136677777742 2246666665544
No 3
>d1duxc_ a.4.5.21 (C:) Elk-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.64 E-value=39 Score=24.34 Aligned_cols=41 Identities=15% Similarity=0.135 Sum_probs=28.3
Q ss_pred cCccccCCCchHHHHHHhhccCCcccCCCCChHHHHHHHHhhhCCc
Q 014340 340 NEIMGLGYTEAFPTLFHNLDNGCIINYSCFQYSGVVADLQAYCKLP 385 (426)
Q Consensus 340 kGIi~lgsdeeva~lFn~L~~~~~~~~~~~y~~~v~~~ln~~~~~~ 385 (426)
+|+.-+-+.++||+++-.- |+- ...-|.++.+.+..||++.
T Consensus 27 ~g~Fklv~~~~VA~lWG~~-Knk----~~MnYeklSRaLRyyY~~~ 67 (86)
T d1duxc_ 27 GGEFKLVDAEEVARLWGLR-KNK----TNMNYDKLSRALRYYYDKN 67 (86)
T ss_dssp TTEEECTTHHHHHHHHHHT-TTC----SCCCHHHHHHHHHHHHTTT
T ss_pred CCEEEecCHHHHHHHHHhc-cCC----CCCCHHHHHHHHHHHHhcc
Confidence 3444344678999999633 331 1234999999999999875
No 4
>d1yo5c1 a.4.5.21 (C:247-334) Sam pointed domain containing ets transcription SPDEF {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.17 E-value=44 Score=24.17 Aligned_cols=36 Identities=14% Similarity=0.179 Sum_probs=25.7
Q ss_pred CCCchHHHHHHhhccCCcccCCCCChHHHHHHHHhhhCCch
Q 014340 346 GYTEAFPTLFHNLDNGCIINYSCFQYSGVVADLQAYCKLPW 386 (426)
Q Consensus 346 gsdeeva~lFn~L~~~~~~~~~~~y~~~v~~~ln~~~~~~w 386 (426)
-+.++||+++-.--..- ..-|.++.+.+..||++.-
T Consensus 36 ~~~~~VA~lWG~~Knk~-----~M~YeklSRALRyYY~~~i 71 (88)
T d1yo5c1 36 EDSAQVARLWGIRKNRP-----AMNYDKLSRSIRQYYKKGI 71 (88)
T ss_dssp SCHHHHHHHHHHHHTCT-----TCCHHHHHHHHHHTTTTTS
T ss_pred cCHHHHHHHHHHhhcCC-----CCCHHHHHHHHHHHHhccc
Confidence 46689999996442222 2239999999999998653
No 5
>d2qapa1 c.1.10.1 (A:1-357) Fructose-1,6-bisphosphate aldolase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}
Probab=15.57 E-value=14 Score=33.92 Aligned_cols=58 Identities=21% Similarity=0.339 Sum_probs=39.1
Q ss_pred HHHHHhcCcc-ccCCCchHHHHHHhhccCCcccCCCCChHHHHHHHHhhhC--CchHHHHHhhcc
Q 014340 334 AELLVQNEIM-GLGYTEAFPTLFHNLDNGCIINYSCFQYSGVVADLQAYCK--LPWHKWKATLKQ 395 (426)
Q Consensus 334 V~lL~~kGIi-~lgsdeeva~lFn~L~~~~~~~~~~~y~~~v~~~ln~~~~--~~w~~w~a~l~~ 395 (426)
+++|.++||+ ++.=|+-++.+.++.-.... -.. ++++.+...+||. -+..+|++.+.-
T Consensus 103 ~~ll~~kGIVPgIKVDkGl~~~~~G~~~ek~---t~g-LD~L~~R~~ey~~~Ga~faKwRsVi~i 163 (357)
T d2qapa1 103 PEYLTARGVVPGIKTDMGLCPLLEGAEGEQM---TEG-LDGYVKRASAYYKKGCRFCKWRNVYKI 163 (357)
T ss_dssp HHHHHHTTCEEEEECCCCEEECSSSSTTCEE---ECC-CTTHHHHHHHHHHTTCCEEEEEEEECC
T ss_pred HHHHHhCCCeeeeecCCcccCCCCCCCcccc---ccc-hHHHHHHHHHhhhcceecccchhcccc
Confidence 7899999999 88877665444433221111 123 8889999999984 466789886643
No 6
>d1zaia1 c.1.10.1 (A:1-363) Fructose-1,6-bisphosphate aldolase {Rabbit (Oryctolagus cuniculus), muscle isozyme [TaxId: 9986]}
Probab=15.14 E-value=12 Score=34.50 Aligned_cols=56 Identities=20% Similarity=0.318 Sum_probs=36.7
Q ss_pred HHHHHhcCcc-ccCCCchHHHHHHhhccCCcccCCCCChHHHHHHHHhhhCC--chHHHHHhhc
Q 014340 334 AELLVQNEIM-GLGYTEAFPTLFHNLDNGCIINYSCFQYSGVVADLQAYCKL--PWHKWKATLK 394 (426)
Q Consensus 334 V~lL~~kGIi-~lgsdeeva~lFn~L~~~~~~~~~~~y~~~v~~~ln~~~~~--~w~~w~a~l~ 394 (426)
+++|.++||| ++.=|+-+..+... .+..+. .-+.++-+.+.+|+.. +..+|++.+.
T Consensus 94 ~~ll~~kGIvPgIKVDkGl~~l~~~--~ge~~t---~gLd~L~~rl~~y~~~Ga~faKwRsVi~ 152 (363)
T d1zaia1 94 PQVIKSKGGVVGIKVDKGVVPLAGT--NGETTT---QGLDGLSERCAQYKKDGADFAKWRCVLK 152 (363)
T ss_dssp HHHHHHTTCEEEEECCCCEEECTTS--SSCEEE---CCCTTHHHHHHHHHHTTCCEEEEEEEEC
T ss_pred chhhhhcCceeeEecCccccccCCC--cccccc---cccccHHHHHHHHHhcCccccchhhccc
Confidence 9999999999 87777665554421 122111 1256677788888875 4568988664
No 7
>d1qo5a_ c.1.10.1 (A:) Fructose-1,6-bisphosphate aldolase {Human (Homo sapiens), liver isozyme [TaxId: 9606]}
Probab=12.39 E-value=16 Score=33.51 Aligned_cols=56 Identities=21% Similarity=0.310 Sum_probs=36.9
Q ss_pred HHHHHhcCcc-ccCCCchHHHHHHhhccCCcccCCCCChHHHHHHHHhhhCC--chHHHHHhhc
Q 014340 334 AELLVQNEIM-GLGYTEAFPTLFHNLDNGCIINYSCFQYSGVVADLQAYCKL--PWHKWKATLK 394 (426)
Q Consensus 334 V~lL~~kGIi-~lgsdeeva~lFn~L~~~~~~~~~~~y~~~v~~~ln~~~~~--~w~~w~a~l~ 394 (426)
+++|.++||| ++.=|+-++.+... .+..+. .-+.++-+.+.+|+.. +..+|++.++
T Consensus 94 ~~ll~~kGIvPgIKVDkGl~~l~~~--~ge~~t---~gLdgL~~Rl~~y~~~Ga~faKwRaVi~ 152 (360)
T d1qo5a_ 94 RNILKEKGIVVGIKLDQGGAPLAGT--NKETTI---QGLDGLSERCAQYKKDGVDFGKWRAVLR 152 (360)
T ss_dssp HHHHHHTTCEEEEECCCCEEECTTS--SSCEEE---CCCTTHHHHHHHHHHTTCCEEEEEEEEC
T ss_pred hHHHHhcCceeEEecCCceecCccC--Cccccc---cccccHHHHHHHHHhcCccccceeeecc
Confidence 8999999999 88777655544311 122111 1266788888889875 4568888664
No 8
>d2outa1 a.140.3.2 (A:94-131) Uncharacterized protein HI1507 in Mu-like prophage FluMu region {Haemophilus influenzae [TaxId: 727]}
Probab=11.86 E-value=40 Score=19.58 Aligned_cols=16 Identities=31% Similarity=0.669 Sum_probs=12.6
Q ss_pred HHHHHcCcEEecCCCC
Q 014340 259 KELHQAGVKFKPGSSK 274 (426)
Q Consensus 259 teL~~aGVkfk~~~~~ 274 (426)
.+|-+.||.||.+.+.
T Consensus 6 aqltergitfkqsatk 21 (38)
T d2outa1 6 AQLTERGITFKQSATK 21 (38)
T ss_dssp HHHHHHTCCCSSSCCS
T ss_pred HHHHHcCceeeccchh
Confidence 5788999999987543
No 9
>d1v8ca2 d.129.5.1 (A:88-165) MoaD-related protein, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=10.69 E-value=46 Score=22.54 Aligned_cols=11 Identities=55% Similarity=0.682 Sum_probs=9.9
Q ss_pred eeeecCeEEee
Q 014340 284 GILEIPFLTVY 294 (426)
Q Consensus 284 G~L~IP~l~id 294 (426)
|.|+||+|.+.
T Consensus 49 gsl~ip~lrve 59 (78)
T d1v8ca2 49 GSLSIPQLRVE 59 (78)
T ss_dssp TTEEEEEEEEE
T ss_pred cceecceEEEE
Confidence 88999999886
No 10
>d1awca_ a.4.5.21 (A:) GA binding protein (GABP) alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=10.59 E-value=48 Score=24.96 Aligned_cols=62 Identities=15% Similarity=0.087 Sum_probs=40.9
Q ss_pred cCCCchHHHHHHhhccCCcccCCCCChHHHHHHHHhhhCCchH-HHH-HhhcccccccchHHHHHHHHH
Q 014340 345 LGYTEAFPTLFHNLDNGCIINYSCFQYSGVVADLQAYCKLPWH-KWK-ATLKQNYFNTPWASISVIAAV 411 (426)
Q Consensus 345 lgsdeeva~lFn~L~~~~~~~~~~~y~~~v~~~ln~~~~~~w~-~w~-a~l~~~yf~npW~~is~vaA~ 411 (426)
+-+.++||+++-.- |+- ...-|.++.+.+.-||++.-- +-. ..+.-.+..+||.+++.-++-
T Consensus 31 l~d~e~VA~lWG~~-Knk----~~M~YeklSRaLRyYY~~~il~Kv~g~rl~Y~F~~d~~~~~~~~~~~ 94 (110)
T d1awca_ 31 LNQPELVAQKWGQR-KNK----PTMNYEKLSRALRYYYDGDMICKVQGKRFVYKFVCDLKTLIGYSAAE 94 (110)
T ss_dssp CSSHHHHHHHHHHH-HTC----TTCCHHHHHHHHHGGGGSSSEEECTTSTTEEEECSCHHHHTSSCHHH
T ss_pred eCCHHHHHHHHHHh-hCC----CcccHHHHHHHHHHHHhcccEEecCCcEEEEeccCCHHHHhCCCHHH
Confidence 44678999999633 331 123399999999999987542 111 235556678999987655543
Done!