Query 014342
Match_columns 426
No_of_seqs 394 out of 2816
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 09:50:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014342.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014342hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t4n_C Nuclear protein SNF4; C 100.0 6.9E-32 2.4E-36 263.7 22.6 246 143-417 18-263 (323)
2 2qrd_G Protein C1556.08C; AMPK 100.0 1.4E-26 4.8E-31 227.1 24.8 234 142-402 9-246 (334)
3 2v8q_E 5'-AMP-activated protei 99.9 7.2E-27 2.5E-31 228.9 18.9 231 144-402 24-254 (330)
4 1z0n_A 5'-AMP-activated protei 99.9 4.4E-24 1.5E-28 170.9 11.0 86 16-106 6-91 (96)
5 3kh5_A Protein MJ1225; AMPK, A 99.9 9.7E-23 3.3E-27 194.0 22.4 201 156-398 4-204 (280)
6 2qlv_B Protein SIP2, protein S 99.9 1.3E-23 4.3E-28 196.4 11.1 88 19-107 2-89 (252)
7 3ddj_A CBS domain-containing p 99.9 6.7E-23 2.3E-27 197.4 14.6 195 154-400 92-286 (296)
8 3kh5_A Protein MJ1225; AMPK, A 99.9 3.3E-22 1.1E-26 190.3 16.4 193 154-397 83-279 (280)
9 3t4n_C Nuclear protein SNF4; C 99.9 6.9E-22 2.4E-26 192.7 18.4 201 157-399 116-320 (323)
10 3ddj_A CBS domain-containing p 99.9 1.2E-22 4E-27 195.7 11.6 195 154-398 19-213 (296)
11 3nme_A Ptpkis1 protein, SEX4 g 99.9 6E-22 2.1E-26 190.9 12.3 87 17-105 166-254 (294)
12 2yzq_A Putative uncharacterize 99.9 2.1E-21 7.2E-26 185.2 13.9 195 155-398 60-278 (282)
13 2qrd_G Protein C1556.08C; AMPK 99.9 2.5E-20 8.5E-25 182.5 20.0 201 160-400 112-316 (334)
14 2v8q_E 5'-AMP-activated protei 99.8 1.3E-20 4.5E-25 184.2 17.3 203 158-400 121-324 (330)
15 2yzq_A Putative uncharacterize 99.8 3.2E-20 1.1E-24 177.0 10.2 177 156-394 2-179 (282)
16 4esy_A CBS domain containing m 99.7 1.3E-18 4.6E-23 153.9 8.1 151 143-315 6-162 (170)
17 3l2b_A Probable manganase-depe 99.7 9E-17 3.1E-21 150.6 14.3 215 154-398 6-243 (245)
18 4esy_A CBS domain containing m 99.7 2.4E-17 8.1E-22 145.8 8.1 129 256-398 23-161 (170)
19 3k6e_A CBS domain protein; str 99.7 1E-16 3.5E-21 140.1 11.6 120 258-400 24-143 (156)
20 3i8n_A Uncharacterized protein 99.7 2E-16 6.9E-21 133.3 12.2 113 259-398 16-128 (130)
21 3lv9_A Putative transporter; C 99.7 4.3E-16 1.5E-20 134.2 14.1 115 257-399 29-145 (148)
22 3hf7_A Uncharacterized CBS-dom 99.7 1.9E-16 6.3E-21 133.8 11.3 116 259-399 12-127 (130)
23 3kpb_A Uncharacterized protein 99.7 3.9E-16 1.3E-20 129.5 12.8 114 257-399 7-120 (122)
24 3i8n_A Uncharacterized protein 99.7 2.7E-16 9.1E-21 132.5 11.5 126 152-314 3-128 (130)
25 3k6e_A CBS domain protein; str 99.7 3.2E-16 1.1E-20 136.9 12.1 138 147-318 8-145 (156)
26 3lfr_A Putative metal ION tran 99.7 9.8E-17 3.4E-21 136.5 8.5 116 259-400 13-128 (136)
27 3jtf_A Magnesium and cobalt ef 99.7 2.5E-16 8.5E-21 132.6 10.8 112 259-399 15-126 (129)
28 3gby_A Uncharacterized protein 99.7 1.8E-16 6.3E-21 133.1 8.8 116 257-399 11-126 (128)
29 3nqr_A Magnesium and cobalt ef 99.7 1.7E-16 5.8E-21 133.2 8.5 111 260-397 14-124 (127)
30 3lhh_A CBS domain protein; str 99.7 1.3E-15 4.4E-20 135.0 14.4 117 257-401 48-166 (172)
31 1pbj_A Hypothetical protein; s 99.7 7.7E-16 2.6E-20 128.2 12.0 118 257-401 7-124 (125)
32 3oco_A Hemolysin-like protein 99.6 5.5E-16 1.9E-20 134.4 11.1 116 260-403 31-147 (153)
33 2ef7_A Hypothetical protein ST 99.6 1.1E-15 3.8E-20 128.9 12.5 117 257-400 10-126 (133)
34 3lv9_A Putative transporter; C 99.6 1.7E-15 5.9E-20 130.4 13.4 126 152-315 20-145 (148)
35 3hf7_A Uncharacterized CBS-dom 99.6 5E-16 1.7E-20 131.1 9.5 126 155-315 2-127 (130)
36 3fhm_A Uncharacterized protein 99.6 2.4E-15 8.1E-20 132.1 13.4 117 259-400 35-151 (165)
37 2rih_A Conserved protein with 99.6 1.9E-15 6.4E-20 129.0 12.3 116 257-398 11-127 (141)
38 3ocm_A Putative membrane prote 99.6 3.9E-15 1.3E-19 132.2 14.3 126 152-316 33-158 (173)
39 2nyc_A Nuclear protein SNF4; b 99.6 2.3E-15 7.9E-20 128.3 12.0 125 257-399 17-141 (144)
40 3ocm_A Putative membrane prote 99.6 3.5E-15 1.2E-19 132.5 13.4 118 259-405 46-163 (173)
41 3lqn_A CBS domain protein; csg 99.6 2.6E-15 9E-20 129.4 12.1 121 259-401 25-145 (150)
42 1vr9_A CBS domain protein/ACT 99.6 2.3E-15 7.9E-20 138.2 12.2 163 154-382 12-174 (213)
43 3fv6_A YQZB protein; CBS domai 99.6 2.4E-15 8.2E-20 131.2 11.6 119 257-399 23-144 (159)
44 3lhh_A CBS domain protein; str 99.6 3.3E-15 1.1E-19 132.3 12.5 128 151-316 38-165 (172)
45 2o16_A Acetoin utilization pro 99.6 3.4E-15 1.2E-19 130.5 12.4 124 257-399 11-135 (160)
46 2p9m_A Hypothetical protein MJ 99.6 2.5E-15 8.6E-20 127.4 11.0 117 257-399 14-136 (138)
47 2yzi_A Hypothetical protein PH 99.6 5.2E-15 1.8E-19 125.5 12.6 120 257-402 13-132 (138)
48 1o50_A CBS domain-containing p 99.6 6.1E-15 2.1E-19 128.3 13.0 125 256-400 21-154 (157)
49 3nqr_A Magnesium and cobalt ef 99.6 9E-16 3.1E-20 128.7 7.2 124 154-314 2-125 (127)
50 2uv4_A 5'-AMP-activated protei 99.6 7.3E-15 2.5E-19 127.1 12.9 122 259-398 29-150 (152)
51 3fv6_A YQZB protein; CBS domai 99.6 7.4E-15 2.5E-19 128.1 12.9 140 145-319 7-148 (159)
52 2rc3_A CBS domain; in SITU pro 99.6 5.6E-15 1.9E-19 124.9 11.8 116 259-400 17-132 (135)
53 4fry_A Putative signal-transdu 99.6 5.4E-15 1.8E-19 128.5 11.9 130 259-418 21-150 (157)
54 3k2v_A Putative D-arabinose 5- 99.6 4.1E-15 1.4E-19 128.2 10.4 113 257-395 34-148 (149)
55 3oco_A Hemolysin-like protein 99.6 3.4E-15 1.2E-19 129.4 9.8 127 152-316 17-144 (153)
56 4gqw_A CBS domain-containing p 99.6 3.7E-15 1.3E-19 128.2 9.6 122 260-399 16-143 (152)
57 3oi8_A Uncharacterized protein 99.6 1.8E-15 6.1E-20 131.8 7.7 110 257-394 44-155 (156)
58 3ctu_A CBS domain protein; str 99.6 3.9E-15 1.3E-19 129.2 9.7 120 259-401 25-144 (156)
59 3lqn_A CBS domain protein; csg 99.6 6.9E-15 2.4E-19 126.7 11.2 137 150-318 10-146 (150)
60 2pfi_A Chloride channel protei 99.6 9.4E-15 3.2E-19 127.5 12.1 129 257-400 19-148 (164)
61 1y5h_A Hypothetical protein RV 99.6 1.9E-15 6.5E-20 127.4 7.2 116 257-398 14-130 (133)
62 3jtf_A Magnesium and cobalt ef 99.6 2.7E-15 9.1E-20 126.3 7.9 124 153-315 3-126 (129)
63 2emq_A Hypothetical conserved 99.6 1.4E-14 4.8E-19 125.6 12.7 119 260-400 22-140 (157)
64 1pvm_A Conserved hypothetical 99.6 8.3E-15 2.8E-19 131.0 11.4 119 257-399 15-133 (184)
65 3lfr_A Putative metal ION tran 99.6 1.3E-15 4.3E-20 129.6 5.6 126 154-315 2-127 (136)
66 3ctu_A CBS domain protein; str 99.6 1.7E-14 5.9E-19 125.1 12.0 136 151-319 11-146 (156)
67 2d4z_A Chloride channel protei 99.6 2.6E-14 8.8E-19 134.3 14.0 139 256-399 18-246 (250)
68 3sl7_A CBS domain-containing p 99.6 9.6E-15 3.3E-19 129.4 10.4 123 260-400 15-157 (180)
69 3kxr_A Magnesium transporter, 99.6 2.2E-14 7.5E-19 131.0 12.5 115 256-401 59-176 (205)
70 3fhm_A Uncharacterized protein 99.6 1.1E-14 3.8E-19 127.8 9.8 130 152-316 21-151 (165)
71 2ef7_A Hypothetical protein ST 99.5 3.9E-14 1.3E-18 119.3 12.3 128 152-318 1-128 (133)
72 1yav_A Hypothetical protein BS 99.5 1.5E-14 5.1E-19 126.0 10.0 119 260-400 25-143 (159)
73 3oi8_A Uncharacterized protein 99.5 1.4E-14 4.9E-19 126.0 9.9 122 151-310 34-155 (156)
74 3gby_A Uncharacterized protein 99.5 1.1E-14 3.7E-19 122.1 8.2 124 153-315 3-126 (128)
75 2j9l_A Chloride channel protei 99.5 4.4E-14 1.5E-18 125.8 12.6 123 261-400 25-166 (185)
76 1vr9_A CBS domain protein/ACT 99.5 4.5E-14 1.5E-18 129.6 12.4 112 257-399 19-130 (213)
77 4gqw_A CBS domain-containing p 99.5 2E-14 6.9E-19 123.5 9.5 142 153-316 3-144 (152)
78 1pbj_A Hypothetical protein; s 99.5 7E-14 2.4E-18 116.2 12.1 121 156-315 2-122 (125)
79 2p9m_A Hypothetical protein MJ 99.5 4.7E-14 1.6E-18 119.4 11.2 128 150-315 3-136 (138)
80 3kpb_A Uncharacterized protein 99.5 3E-14 1E-18 118.1 9.6 119 156-315 2-120 (122)
81 2o16_A Acetoin utilization pro 99.5 1.1E-13 3.8E-18 120.8 13.8 134 154-317 4-137 (160)
82 4aee_A Alpha amylase, catalyti 99.5 1.3E-14 4.4E-19 155.7 9.3 82 16-100 13-102 (696)
83 2d4z_A Chloride channel protei 99.5 5.3E-14 1.8E-18 132.2 11.4 151 152-315 10-246 (250)
84 2j9l_A Chloride channel protei 99.5 7E-14 2.4E-18 124.5 11.7 150 150-318 6-168 (185)
85 3kxr_A Magnesium transporter, 99.5 2.5E-13 8.6E-18 123.9 15.1 132 144-318 41-177 (205)
86 2uv4_A 5'-AMP-activated protei 99.5 9.2E-14 3.1E-18 120.1 11.3 136 147-314 15-150 (152)
87 2emq_A Hypothetical conserved 99.5 1.5E-13 5.1E-18 119.1 12.7 137 151-319 7-143 (157)
88 3sl7_A CBS domain-containing p 99.5 4.8E-14 1.6E-18 124.9 9.5 154 154-318 3-159 (180)
89 2rih_A Conserved protein with 99.5 2.5E-13 8.6E-18 115.6 13.4 122 155-315 5-128 (141)
90 1o50_A CBS domain-containing p 99.5 3.8E-13 1.3E-17 116.8 14.8 135 152-316 13-154 (157)
91 2yzi_A Hypothetical protein PH 99.5 1.5E-13 5.1E-18 116.4 11.6 129 151-317 3-131 (138)
92 3k2v_A Putative D-arabinose 5- 99.5 6.9E-14 2.4E-18 120.5 9.6 121 155-311 28-148 (149)
93 2rc3_A CBS domain; in SITU pro 99.5 1.1E-13 3.9E-18 116.8 9.9 125 156-316 7-132 (135)
94 1yav_A Hypothetical protein BS 99.5 1.8E-13 6E-18 119.2 10.8 135 152-318 11-145 (159)
95 2pfi_A Chloride channel protei 99.5 1.6E-13 5.5E-18 119.5 10.5 139 152-317 10-149 (164)
96 4fry_A Putative signal-transdu 99.5 1.2E-13 4E-18 119.9 9.5 128 155-318 7-138 (157)
97 1y5h_A Hypothetical protein RV 99.5 7.6E-14 2.6E-18 117.5 6.9 126 151-314 4-130 (133)
98 2oux_A Magnesium transporter; 99.5 2.3E-13 7.9E-18 130.6 11.1 114 256-400 142-260 (286)
99 2nyc_A Nuclear protein SNF4; b 99.4 4.9E-13 1.7E-17 113.7 11.4 132 154-315 7-141 (144)
100 2yvy_A MGTE, Mg2+ transporter 99.4 6.5E-13 2.2E-17 126.8 12.6 115 256-401 140-259 (278)
101 3pc3_A CG1753, isoform A; CBS, 99.4 5E-13 1.7E-17 139.0 11.3 120 256-401 389-513 (527)
102 1pvm_A Conserved hypothetical 99.4 6.1E-13 2.1E-17 118.8 10.0 125 155-315 9-133 (184)
103 2zy9_A Mg2+ transporter MGTE; 99.3 8.1E-12 2.8E-16 128.0 12.8 114 255-399 159-277 (473)
104 2oux_A Magnesium transporter; 99.3 9.6E-12 3.3E-16 119.2 12.2 130 145-317 125-261 (286)
105 3usb_A Inosine-5'-monophosphat 99.3 1.2E-11 4E-16 127.7 11.8 115 257-399 119-234 (511)
106 3pc3_A CG1753, isoform A; CBS, 99.3 9.1E-12 3.1E-16 129.4 11.0 131 152-317 381-513 (527)
107 2yvy_A MGTE, Mg2+ transporter 99.3 1.8E-11 6.1E-16 116.8 10.8 121 153-316 133-258 (278)
108 3org_A CMCLC; transporter, tra 99.2 6.2E-12 2.1E-16 133.4 7.2 133 257-396 459-622 (632)
109 1zfj_A Inosine monophosphate d 99.2 7.6E-11 2.6E-15 121.5 14.7 115 257-399 96-211 (491)
110 1me8_A Inosine-5'-monophosphat 99.2 2.7E-12 9.2E-17 132.5 3.2 163 152-377 93-260 (503)
111 3usb_A Inosine-5'-monophosphat 99.2 6.3E-10 2.1E-14 114.8 20.7 170 147-382 108-279 (511)
112 1me8_A Inosine-5'-monophosphat 99.2 1.2E-12 4.1E-17 135.1 0.0 117 257-399 103-221 (503)
113 4af0_A Inosine-5'-monophosphat 99.2 1.4E-12 4.7E-17 131.9 0.0 112 258-397 145-256 (556)
114 4fxs_A Inosine-5'-monophosphat 99.2 6.7E-12 2.3E-16 129.0 4.0 113 257-397 95-207 (496)
115 2zy9_A Mg2+ transporter MGTE; 99.2 2.1E-10 7.2E-15 117.5 13.7 129 145-316 143-278 (473)
116 3org_A CMCLC; transporter, tra 99.1 1.2E-11 4.2E-16 131.1 3.4 152 153-313 451-623 (632)
117 4avf_A Inosine-5'-monophosphat 99.1 4.7E-12 1.6E-16 130.1 0.0 113 257-398 94-206 (490)
118 1vrd_A Inosine-5'-monophosphat 99.1 5.8E-12 2E-16 129.9 0.1 116 257-400 101-216 (494)
119 4aef_A Neopullulanase (alpha-a 99.1 9.5E-11 3.2E-15 124.7 8.9 68 19-89 15-83 (645)
120 1zfj_A Inosine monophosphate d 99.0 2.9E-09 9.8E-14 109.7 14.7 117 158-315 93-211 (491)
121 1jcn_A Inosine monophosphate d 99.0 8.9E-12 3E-16 129.1 -4.6 117 257-398 114-232 (514)
122 4fxs_A Inosine-5'-monophosphat 98.9 6.6E-10 2.2E-14 114.2 6.3 116 156-313 90-207 (496)
123 3ghd_A A cystathionine beta-sy 98.9 1.2E-09 4.2E-14 81.6 5.6 47 351-398 2-48 (70)
124 2cu0_A Inosine-5'-monophosphat 98.9 1.3E-10 4.3E-15 119.6 0.0 109 257-398 99-207 (486)
125 4avf_A Inosine-5'-monophosphat 98.9 1.1E-09 3.8E-14 112.4 6.5 117 155-314 88-206 (490)
126 1vrd_A Inosine-5'-monophosphat 98.9 1.1E-09 3.9E-14 112.7 4.7 118 156-315 96-215 (494)
127 2cu0_A Inosine-5'-monophosphat 98.8 3.1E-09 1.1E-13 109.2 4.9 161 158-388 96-257 (486)
128 4af0_A Inosine-5'-monophosphat 98.8 7E-10 2.4E-14 112.2 0.0 108 166-313 147-256 (556)
129 3fio_A A cystathionine beta-sy 98.7 1.1E-08 3.7E-13 75.7 5.6 50 350-400 1-50 (70)
130 3ghd_A A cystathionine beta-sy 98.7 1.4E-08 4.7E-13 75.8 5.8 62 261-335 2-63 (70)
131 1jcn_A Inosine monophosphate d 98.7 7.8E-10 2.7E-14 114.5 -2.7 119 156-313 109-231 (514)
132 2z0b_A GDE5, KIAA1434, putativ 98.5 2.2E-07 7.5E-12 78.0 7.4 58 19-76 7-75 (131)
133 3l2b_A Probable manganase-depe 98.4 5E-07 1.7E-11 83.9 7.2 51 349-399 15-65 (245)
134 3fio_A A cystathionine beta-sy 98.3 1.7E-06 5.7E-11 63.6 7.1 47 166-214 1-47 (70)
135 1ac0_A Glucoamylase; hydrolase 98.0 2.9E-06 9.9E-11 68.7 4.2 59 18-76 4-73 (108)
136 3c8d_A Enterochelin esterase; 98.0 1.2E-05 4.2E-10 80.3 9.8 87 19-108 29-154 (403)
137 1m7x_A 1,4-alpha-glucan branch 97.4 0.00035 1.2E-08 73.6 9.2 68 21-90 25-100 (617)
138 3aml_A OS06G0726400 protein; s 97.4 0.00025 8.7E-09 76.2 7.6 64 22-88 66-143 (755)
139 3k1d_A 1,4-alpha-glucan-branch 97.3 0.0003 1E-08 75.1 7.8 68 21-90 136-211 (722)
140 2laa_A Beta/alpha-amylase; SBD 96.4 0.0094 3.2E-07 47.3 7.3 66 21-88 5-77 (104)
141 1qho_A Alpha-amylase; glycosid 96.2 0.011 3.9E-07 62.8 9.0 58 17-76 578-653 (686)
142 3vgf_A Malto-oligosyltrehalose 96.0 0.0042 1.4E-07 64.5 4.5 62 22-89 10-74 (558)
143 1bf2_A Isoamylase; hydrolase, 96.0 0.0052 1.8E-07 66.1 5.0 55 23-80 18-85 (750)
144 1cyg_A Cyclodextrin glucanotra 95.8 0.018 6.1E-07 61.3 8.1 59 18-76 577-647 (680)
145 2wsk_A Glycogen debranching en 95.8 0.011 3.6E-07 62.7 6.2 54 22-79 20-77 (657)
146 1wzl_A Alpha-amylase II; pullu 95.7 0.0092 3.1E-07 62.3 5.5 60 18-77 20-87 (585)
147 2vn4_A Glucoamylase; hydrolase 95.7 0.029 9.8E-07 58.6 9.1 58 19-76 495-563 (599)
148 2vr5_A Glycogen operon protein 95.6 0.015 5.1E-07 62.2 6.7 55 22-80 30-91 (718)
149 3bmv_A Cyclomaltodextrin gluca 95.5 0.021 7.1E-07 60.8 7.4 59 18-76 581-651 (683)
150 2bhu_A Maltooligosyltrehalose 95.5 0.011 3.9E-07 61.8 5.2 62 22-90 35-97 (602)
151 1d3c_A Cyclodextrin glycosyltr 95.3 0.026 8.9E-07 60.0 7.4 59 18-76 584-654 (686)
152 1vem_A Beta-amylase; beta-alph 95.1 0.026 8.7E-07 57.9 6.4 60 16-76 415-485 (516)
153 1j0h_A Neopullulanase; beta-al 95.1 0.011 3.8E-07 61.7 3.8 62 16-77 18-89 (588)
154 2e8y_A AMYX protein, pullulana 94.5 0.039 1.3E-06 59.0 6.1 65 22-89 114-185 (718)
155 2fhf_A Pullulanase; multiple d 93.8 0.057 1.9E-06 60.1 5.7 67 22-90 305-385 (1083)
156 3faw_A Reticulocyte binding pr 93.0 0.048 1.7E-06 59.4 3.5 65 23-89 146-224 (877)
157 2ya0_A Putative alkaline amylo 92.7 0.12 4.3E-06 55.0 6.2 65 23-89 26-106 (714)
158 1gcy_A Glucan 1,4-alpha-maltot 92.6 0.022 7.4E-07 58.7 0.0 58 18-76 428-495 (527)
159 4aio_A Limit dextrinase; hydro 92.4 0.09 3.1E-06 57.3 4.5 53 23-78 138-194 (884)
160 1ea9_C Cyclomaltodextrinase; h 92.1 0.026 8.9E-07 58.8 -0.1 61 17-77 19-86 (583)
161 2wan_A Pullulanase; hydrolase, 92.1 0.11 3.9E-06 56.9 4.8 63 22-88 326-398 (921)
162 3m07_A Putative alpha amylase; 91.7 0.2 6.8E-06 52.5 6.0 62 22-90 43-107 (618)
163 2wan_A Pullulanase; hydrolase, 91.1 0.3 1E-05 53.6 6.9 60 20-81 152-221 (921)
164 2ya1_A Putative alkaline amylo 88.9 0.31 1.1E-05 54.0 4.9 64 23-88 333-412 (1014)
165 4fch_A Outer membrane protein 88.8 0.34 1.1E-05 43.7 4.2 50 31-81 12-63 (221)
166 1ji1_A Alpha-amylase I; beta/a 88.2 0.4 1.4E-05 50.3 4.9 56 22-78 31-96 (637)
167 2c3v_A Alpha-amylase G-6; carb 87.0 1.2 4.1E-05 34.9 5.8 63 22-86 11-80 (102)
168 4fe9_A Outer membrane protein 64.2 6.1 0.00021 39.5 4.8 47 31-78 150-198 (470)
169 2djm_A Glucoamylase A; beta sa 56.3 23 0.00077 27.8 5.7 59 21-79 21-91 (106)
170 1tif_A IF3-N, translation init 55.0 19 0.00065 26.5 4.8 30 372-401 13-42 (78)
171 2eef_A Protein phosphatase 1, 51.4 14 0.00048 31.1 4.0 60 20-79 47-122 (156)
172 4fem_A Outer membrane protein 49.1 15 0.00053 35.1 4.6 50 31-81 149-200 (358)
173 4fe9_A Outer membrane protein 43.9 24 0.0008 35.1 5.1 54 31-85 260-320 (470)
174 4dny_A Metalloprotease STCE; m 41.0 25 0.00085 28.4 3.7 23 62-85 99-122 (126)
175 4fch_A Outer membrane protein 40.1 13 0.00045 33.0 2.3 49 32-80 117-169 (221)
176 2fqm_A Phosphoprotein, P prote 38.3 14 0.00049 26.2 1.7 27 38-68 1-27 (75)
177 3fan_A Non-structural protein; 30.2 22 0.00074 31.4 1.9 26 370-395 124-149 (213)
178 1ew4_A CYAY protein; friedreic 27.4 84 0.0029 24.4 4.8 17 68-86 68-84 (106)
179 2jnz_A PHL P 3 allergen; timot 26.3 1.7E+02 0.0058 22.8 6.3 60 18-83 25-90 (108)
180 1p0z_A Sensor kinase CITA; tra 26.2 43 0.0015 26.6 3.0 17 374-390 105-121 (131)
181 1r7h_A NRDH-redoxin; thioredox 25.2 52 0.0018 22.5 3.0 35 363-397 39-73 (75)
182 4aee_A Alpha amylase, catalyti 25.0 48 0.0016 34.8 3.9 57 19-78 132-188 (696)
183 1mhx_A Immunoglobulin-binding 24.8 25 0.00084 23.9 1.0 13 76-88 48-60 (65)
184 3by8_A Sensor protein DCUS; hi 24.7 46 0.0016 26.9 3.0 19 374-392 110-128 (142)
185 2bem_A CBP21; chitin-binding p 24.3 1.8E+02 0.0061 24.6 6.6 71 22-102 76-166 (170)
186 4a02_A EFCBM33A, CBM33, chitin 24.0 1.8E+02 0.0063 24.4 6.6 71 22-102 75-163 (166)
187 2fwh_A Thiol:disulfide interch 22.6 57 0.0019 25.6 3.1 48 352-399 69-125 (134)
188 3ic4_A Glutaredoxin (GRX-1); s 22.3 46 0.0016 24.1 2.3 34 365-398 58-91 (92)
189 3tjo_A Serine protease HTRA1; 21.3 47 0.0016 29.4 2.5 22 370-391 186-207 (231)
190 1fov_A Glutaredoxin 3, GRX3; a 21.2 89 0.003 21.7 3.7 33 368-402 45-77 (82)
191 4aef_A Neopullulanase (alpha-a 21.0 86 0.0029 32.4 4.8 51 20-76 124-178 (645)
192 3lgi_A Protease DEGS; stress-s 20.3 49 0.0017 29.4 2.4 22 369-390 172-193 (237)
193 3ft1_A PHL P 3 allergen; beta- 20.1 1.9E+02 0.0066 22.1 5.5 60 18-83 14-79 (100)
No 1
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=100.00 E-value=6.9e-32 Score=263.69 Aligned_cols=246 Identities=25% Similarity=0.434 Sum_probs=190.9
Q ss_pred HHHHHHHHHhccccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCC
Q 014342 143 LSRDRISSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGS 222 (426)
Q Consensus 143 ~~~~~~~~~l~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~ 222 (426)
...+++.+||++++|+|+||.+.++++++.+.|+.+|+++|.+++++++||||++.++++|++|..|++.++.+++....
T Consensus 18 ~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~~~l~~~~~~~~ 97 (323)
T 3t4n_C 18 LAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFINVIQYYFSNPD 97 (323)
T ss_dssp HHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHHHHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHHHHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHHHHHHHHHcCcc
Confidence 36789999999999999999999999999999999999999999999999999876799999999999998776554321
Q ss_pred CCChhhhcccchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEE
Q 014342 223 NLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILY 302 (426)
Q Consensus 223 ~~~~~~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvG 302 (426)
.. +.+.......+.+...... .|+++++++.+++++.+|++.|.+++++++||++++...+ ..+++|
T Consensus 98 ~~--~~l~~~~~~~v~~i~~~~~----------~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~-~~~l~G 164 (323)
T 3t4n_C 98 KF--ELVDKLQLDGLKDIERALG----------VDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETH-REIVVS 164 (323)
T ss_dssp GG--GGGGGCBHHHHHHHHHHTT----------C----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTC-CEEEEE
T ss_pred hh--HHHHHHHHHHHHHHHHHhC----------CCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCC-ccceEE
Confidence 11 2333333334444332221 3577889999999999999999999999999997532222 113999
Q ss_pred EecHHhHHHHHHhhccccCCCccccccccccccccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCC
Q 014342 303 LASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDND 382 (426)
Q Consensus 303 iit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g 382 (426)
++|++|+++++..+... ......++.+++++. .++++++.+++++.+|+++|.+++++++||+|++|
T Consensus 165 ivt~~di~~~l~~~~~~----~~~~~~~v~~~~~~m---------~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~ 231 (323)
T 3t4n_C 165 VLTQYRILKFVALNCRE----THFLKIPIGDLNIIT---------QDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENG 231 (323)
T ss_dssp EEEHHHHHHHHHHHCGG----GGGCCSBGGGTTCSB---------CTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTC
T ss_pred EecHHHHHHHHHhcCCc----hhhhhCcHHHcCCCC---------CCCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCC
Confidence 99999999998866543 234456777774432 25788999999999999999999999999999999
Q ss_pred cEEEEEeHHHHHHHHhccccccCCCCCccHHHHHH
Q 014342 383 SLLDIYSRSDITALAKDKAYAQIHLDEMNIHQVIA 417 (426)
Q Consensus 383 ~lvGiis~~DI~~~~~~~~~~~l~~~~~~v~~~l~ 417 (426)
+++|+||++||++.+..+.+..+. .+|++++.
T Consensus 232 ~~~Giit~~dl~~~~~~~~~~~~~---~~v~~~m~ 263 (323)
T 3t4n_C 232 YLINVYEAYDVLGLIKGGIYNDLS---LSVGEALM 263 (323)
T ss_dssp BEEEEEETTHHHHHHHTTHHHHTT---SBHHHHGG
T ss_pred eEEEEEeHHHHHHHHhhchhhhcc---CCHHHHHh
Confidence 999999999999988776554442 45555543
No 2
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.95 E-value=1.4e-26 Score=227.08 Aligned_cols=234 Identities=22% Similarity=0.419 Sum_probs=180.0
Q ss_pred HHHHHHHHHHhccccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCC
Q 014342 142 QLSRDRISSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNG 221 (426)
Q Consensus 142 ~~~~~~~~~~l~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~ 221 (426)
....+.+.+||...+|+|+|+...++++++.+.|+.+|+++|.+++++++||+|++.++++|+||.+|++..+...+...
T Consensus 9 ~~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~~~~~~~~ 88 (334)
T 2qrd_G 9 KGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYYQSS 88 (334)
T ss_dssp HHHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHHHHHhhcc
Confidence 34677889999999999999999999999999999999999999999999999976679999999999998765433210
Q ss_pred CCC-ChhhhcccchhhhHHHHHhhccccccCCCCCCCCCCc--eEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCC-Cc
Q 014342 222 SNL-TEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPL--VQAGPYDSLKEVALKILQNKVATVPIIHSTGPAG-SC 297 (426)
Q Consensus 222 ~~~-~~~~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~--v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g-~~ 297 (426)
... ..+.+....+..+.+....++ .+++ +++.+++++.+|++.|.+++++++||++++ .+ ..
T Consensus 89 ~~~~~~~~~~~~~~~~i~~~l~~im------------~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~--~~~~~ 154 (334)
T 2qrd_G 89 SFPEAIAEIDKFRLLGLREVERKIG------------AIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVD--GETGS 154 (334)
T ss_dssp SCGGGGGGGGSCBHHHHHHHHHHHT------------CSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEE--TTTTE
T ss_pred CCccHHHHHhhhchhhHHHHHHhhc------------cCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCC--CCcCc
Confidence 000 011233444555555444433 3445 889999999999999999999999999742 12 00
Q ss_pred ceEEEEecHHhHHHHHHhhccccCCCccccccccccccccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeE
Q 014342 298 QEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPI 377 (426)
Q Consensus 298 ~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPV 377 (426)
..++|++|..||++++...... ......++.+++. . |.++++++.+++++.+|+++|.+++++++||
T Consensus 155 ~~~~Givt~~dl~~~~~~~~~~----~~~~~~~v~~l~~--~-------m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~V 221 (334)
T 2qrd_G 155 EMIVSVLTQYRILKFISMNCKE----TAMLRVPLNQMTI--G-------TWSNLATASMETKVYDVIKMLAEKNISAVPI 221 (334)
T ss_dssp EEEEEEEEHHHHHHHHHHHCGG----GGGCCCBGGGSSC--S-------BCSSCCCBCTTSBHHHHHHHHHHHTCSEEEE
T ss_pred cceEEEeeHHHHHHHHHhhccc----hhhhhCcHHHhCC--c-------ccCCceEECCCCcHHHHHHHHHHcCCcEEEE
Confidence 1299999999999988754322 1223455555421 1 1257788999999999999999999999999
Q ss_pred EcCCCcEEEEEeHHHHHHHHhcccc
Q 014342 378 VDDNDSLLDIYSRSDITALAKDKAY 402 (426)
Q Consensus 378 Vd~~g~lvGiis~~DI~~~~~~~~~ 402 (426)
+|++|+++|+||.+||++.+..+.+
T Consensus 222 vd~~~~~~Giit~~dl~~~~~~~~~ 246 (334)
T 2qrd_G 222 VNSEGTLLNVYESVDVMHLIQDGDY 246 (334)
T ss_dssp ECTTCBEEEEEETHHHHHHHTTSCG
T ss_pred EcCCCcEEEEEEHHHHHHHhhcccc
Confidence 9998999999999999998765543
No 3
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.95 E-value=7.2e-27 Score=228.88 Aligned_cols=231 Identities=34% Similarity=0.594 Sum_probs=181.4
Q ss_pred HHHHHHHHhccccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCC
Q 014342 144 SRDRISSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSN 223 (426)
Q Consensus 144 ~~~~~~~~l~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~ 223 (426)
+.+.+..||...+++|+|+.+.++++++.+.|+.+|+++|.+++++++||+|++.++++|++|.+|++..+........
T Consensus 24 ~~~~~~~~l~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~~~~- 102 (330)
T 2v8q_E 24 NSSVYTTFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSAL- 102 (330)
T ss_dssp CSCHHHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHHHHT-
T ss_pred hhHHHHHHHHcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHhccc-
Confidence 5678999999999999999888999999999999999999999999999999765799999999999987654321100
Q ss_pred CChhhhcccchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEE
Q 014342 224 LTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYL 303 (426)
Q Consensus 224 ~~~~~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGi 303 (426)
.....+....+..+...... .|.++++++.+++++.+|++.|.+++++++||+| ++.| +++|+
T Consensus 103 ~~~~~l~~~~~~~~~~~~~~------------im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~---~~~Gi 165 (330)
T 2v8q_E 103 VQIYELEEHKIETWREVYLQ------------DSFKPLVCISPNASLFDAVSSLIRNKIHRLPVID--PESG---NTLYI 165 (330)
T ss_dssp TTCCCGGGCBHHHHHHHHSS------------SSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEEC--TTTC---CEEEE
T ss_pred cchhHHhhccHHHHHHHHhh------------cccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEe--CCCC---cEEEE
Confidence 00122333444555443332 3578889999999999999999999999999995 2145 69999
Q ss_pred ecHHhHHHHHHhhccccCCCccccccccccccccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCc
Q 014342 304 ASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDS 383 (426)
Q Consensus 304 it~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~ 383 (426)
+|..|+++++..+....+. ..++..++.++.+++. ++++++.+++++.+|+++|.+++++++||+|++|+
T Consensus 166 vt~~dl~~~~~~~~~~~~~-~~~~~~~v~~~~v~~~---------~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~ 235 (330)
T 2v8q_E 166 LTHKRILKFLKLFITEFPK-PEFMSKSLEELQIGTY---------ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGR 235 (330)
T ss_dssp ECHHHHHHHHHHHSCSSSC-CGGGGSBHHHHTCSBC---------SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSB
T ss_pred EcHHHHHHHHHHHhhccCc-hhhhcCCHHHhcccCc---------CCceEECCCCCHHHHHHHHHHcCCCeEEEECCCCc
Confidence 9999999998765432211 1234455555543331 37788999999999999999999999999998899
Q ss_pred EEEEEeHHHHHHHHhcccc
Q 014342 384 LLDIYSRSDITALAKDKAY 402 (426)
Q Consensus 384 lvGiis~~DI~~~~~~~~~ 402 (426)
++|+||.+||++.+..+.+
T Consensus 236 l~Giit~~dl~~~~~~~~~ 254 (330)
T 2v8q_E 236 VVDIYSKFDVINLAAEKTY 254 (330)
T ss_dssp EEEEEEGGGTGGGGGSSCC
T ss_pred EEEEEEHHHHHHHHhcccc
Confidence 9999999999987765433
No 4
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A
Probab=99.91 E-value=4.4e-24 Score=170.94 Aligned_cols=86 Identities=43% Similarity=0.835 Sum_probs=77.1
Q ss_pred CCCcceEEEEEecCCCceEEEEeccCCCCCCCCCCCCCCCCCeEEEEEecCCceEEEEEEEcCeeecCCCCCeeeCCCCC
Q 014342 16 VGSILVPVRFIWPNGGRRVSLSGSFTRWSEPMPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEWRHDENQPHVSGNYGV 95 (426)
Q Consensus 16 ~~~~~~~v~f~~~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~~~~~~~L~~g~y~ykFiVDg~w~~d~~~p~~~d~~G~ 95 (426)
..+.+++++|+|.++|++|+|+|+||+|+ ..+|.+. .|.|+++++|++|.|+|||+|||.|++||.+|++.|+.|+
T Consensus 6 ~~~~~~~v~F~wap~a~~V~v~GdFn~W~-~~~m~~~---~g~w~~~v~l~~G~~~YKf~VdG~~~~DP~~~~~~d~~G~ 81 (96)
T 1z0n_A 6 APAQARPTVFRWTGGGKEVYLSGSFNNWS-KLPMTRS---QNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGT 81 (96)
T ss_dssp ----CEEEEEEECSCCSCEEEEEGGGTTC-CEECEEE---TTEEEEEEEECSEEEEEEEEETTEEECCTTSCEEECTTSC
T ss_pred CCCCceEEEEEECCCCcEEEEEEEeCCCc-cccCEEC---CCEEEEEEEccCCCEEEEEEECCeEEcCCCCCeEECCCCC
Confidence 45678999999999999999999999999 6899984 4899999999999999999999999999999999999999
Q ss_pred eeeEEEeccCC
Q 014342 96 VNCVYIAVPQP 106 (426)
Q Consensus 96 ~nn~~~v~~~~ 106 (426)
.||+|.| ..+
T Consensus 82 ~Nnvi~V-~~~ 91 (96)
T 1z0n_A 82 VNNIIQV-KKT 91 (96)
T ss_dssp EEEEEEE-CSC
T ss_pred EeEEEEE-cCC
Confidence 9999999 543
No 5
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.91 E-value=9.7e-23 Score=194.02 Aligned_cols=201 Identities=14% Similarity=0.283 Sum_probs=149.8
Q ss_pred cccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhcccchh
Q 014342 156 TVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTIS 235 (426)
Q Consensus 156 ~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i~ 235 (426)
++.+++... ++++++++.|+.+|+++|.+++++++||+|+++++++|++|..|++..+....... +.........+.
T Consensus 4 ~v~~~i~~~-~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~~~--~~~~~~~~~~~~ 80 (280)
T 3kh5_A 4 RVMKIAQNK-KIVTVYPTTTIRKALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKYN--LIREKHERNFLA 80 (280)
T ss_dssp BGGGTSCCS-CCCCBCTTSBHHHHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGGGH--HHHTTSTTCHHH
T ss_pred hHHHHhcCC-CcEEECCCCcHHHHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccchhh--hhhhccccchhH
Confidence 344544433 79999999999999999999999999999975689999999999987653211000 000000000000
Q ss_pred hhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHh
Q 014342 236 AWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICR 315 (426)
Q Consensus 236 ~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~ 315 (426)
....... ..|.++++++.+++++.+|++.|.+++++++||+|+ +| +++|++|..|+++++..
T Consensus 81 ~~~~~v~------------~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~ 142 (280)
T 3kh5_A 81 AINEPVR------------EIMEENVITLKENADIDEAIETFLTKNVGGAPIVND---EN---QLISLITERDVIRALLD 142 (280)
T ss_dssp HTTSBGG------------GTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECT---TC---BEEEEEEHHHHHHHHGG
T ss_pred HhhhhHH------------HhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcC---CC---EEEEEEEHHHHHHHHhh
Confidence 0100111 135678899999999999999999999999999952 35 79999999999998765
Q ss_pred hccccCCCccccccccccccccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHH
Q 014342 316 HFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITA 395 (426)
Q Consensus 316 ~~~~~~~~~~~~~~~v~~l~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~ 395 (426)
.... ..++.++| .++++++.+++++.+|++.|.+++++++||+ ++|+++|+||.+||++
T Consensus 143 ~~~~--------~~~v~~~m------------~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~ 201 (280)
T 3kh5_A 143 KIDE--------NEVIDDYI------------TRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIK 201 (280)
T ss_dssp GSCT--------TCBSGGGC------------BCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHH
T ss_pred cCCC--------CCCHHHHh------------CCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHH
Confidence 4221 22444444 2477889999999999999999999999999 5799999999999998
Q ss_pred HHh
Q 014342 396 LAK 398 (426)
Q Consensus 396 ~~~ 398 (426)
.+.
T Consensus 202 ~~~ 204 (280)
T 3kh5_A 202 LLG 204 (280)
T ss_dssp HHT
T ss_pred HHh
Confidence 764
No 6
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} SCOP: b.1.18.21 d.353.1.1
Probab=99.89 E-value=1.3e-23 Score=196.44 Aligned_cols=88 Identities=32% Similarity=0.663 Sum_probs=80.7
Q ss_pred cceEEEEEecCCCceEEEEeccCCCCCCCCCCCCCCCCCeEEEEEecCCceEEEEEEEcCeeecCCCCCeeeCCCCCeee
Q 014342 19 ILVPVRFIWPNGGRRVSLSGSFTRWSEPMPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEWRHDENQPHVSGNYGVVNC 98 (426)
Q Consensus 19 ~~~~v~f~~~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~~~~~~~L~~g~y~ykFiVDg~w~~d~~~p~~~d~~G~~nn 98 (426)
..+|++|+|+++|++|+|+|+|++|++.++|.+.++.+|.|++++.||||.|+|||+|||+|++||++|++.|+.|+.||
T Consensus 2 ~~vpv~f~W~~~a~~V~V~GsF~~W~~~~~m~k~~~~~G~f~~tv~LppG~y~YKFiVDG~w~~Dp~~p~~~d~~G~~nN 81 (252)
T 2qlv_B 2 LMVPVEIRWQQGGSKVYVTGSFTKWRKMIGLIPDSDNNGSFHVKLRLLPGTHRFRFIVDNELRVSDFLPTATDQMGNFVN 81 (252)
T ss_dssp CCEEEEEEECSCCSCEEEEEGGGTTSSCEECEECSSSTTCEEEEEEECSEEEEEEEEETTEEECCTTSCEEBCSSCCCEE
T ss_pred CcEEEEEEEeCCCcEEEEEEEeCCCcCcccceeccCCCCcEEEEEECCCCEEEEEEEECCEEEeCCCCCEEecCCCcCcc
Confidence 47899999999999999999999999888999854457999999999999999999999999999999999999999999
Q ss_pred EEEeccCCC
Q 014342 99 VYIAVPQPD 107 (426)
Q Consensus 99 ~~~v~~~~~ 107 (426)
+|+| .+++
T Consensus 82 vi~V-~~~~ 89 (252)
T 2qlv_B 82 YIEV-RQPE 89 (252)
T ss_dssp EEEE-CC--
T ss_pred eeec-cCcc
Confidence 9999 6543
No 7
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.89 E-value=6.7e-23 Score=197.42 Aligned_cols=195 Identities=12% Similarity=0.237 Sum_probs=155.0
Q ss_pred cccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhcccc
Q 014342 154 THTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHT 233 (426)
Q Consensus 154 ~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~ 233 (426)
..++.++|.. .++++.++.++.+|+++|.+++++++||+|+ +++++|++|..|++..+.... ...+
T Consensus 92 ~~~v~~im~~--~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~-~~~lvGivt~~dl~~~~~~~~-----------~~~~ 157 (296)
T 3ddj_A 92 TTPIIDYMTP--NPVTVYNTSDEFTAINIMVTRNFGSLPVVDI-NDKPVGIVTEREFLLLYKDLD-----------EIFP 157 (296)
T ss_dssp TSBGGGTSEE--SCCCEETTSCHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHGGGGGGSC-----------CCCB
T ss_pred cccHHHhccC--CCEEEcCCCCHHHHHHHHHHcCCCEEEEEcC-CCcEEEEEeHHHHHHhhhccc-----------cccc
Confidence 5789999976 6778999999999999999999999999985 479999999999875442111 0111
Q ss_pred hhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHH
Q 014342 234 ISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCI 313 (426)
Q Consensus 234 i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l 313 (426)
+..+ |.++++++.+++++.+|++.|.+++++++||+| ++| +++|++|..|+++.+
T Consensus 158 v~~~-------------------m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd---~~~---~~~Givt~~dl~~~~ 212 (296)
T 3ddj_A 158 VKVF-------------------MSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVID---DDN---KVVGIVTVVNAIKQL 212 (296)
T ss_dssp HHHH-------------------SBCSCCCEETTSBHHHHHHHHHHHTCSEEEEEC---TTS---CEEEEEEHHHHHHHH
T ss_pred HHHh-------------------hcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEc---CCC---EEEEEEEHHHHHHHH
Confidence 2221 356788899999999999999999999999995 235 699999999999988
Q ss_pred HhhccccCCCccccccccccccccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHH
Q 014342 314 CRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDI 393 (426)
Q Consensus 314 ~~~~~~~~~~~~~~~~~v~~l~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI 393 (426)
...+..... ......++.++| .++++++.+++++.+|+++|.+++++++||+|++|+++|+||++||
T Consensus 213 ~~~~~~~~~-~~~~~~~v~~~m------------~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~Di 279 (296)
T 3ddj_A 213 AKAVDKLDP-DYFYGKVVKDVM------------VTNLVTIDELASVNRAAAEMIVKRIGSLLILNKDNTIRGIITERDL 279 (296)
T ss_dssp HHHHHHTCT-HHHHTCBHHHHS------------BCCCCBCCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHH
T ss_pred HHHHhhcCh-hhhcCcCHHHHh------------CCCCeEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEcHHHH
Confidence 754432110 011233444443 2578899999999999999999999999999999999999999999
Q ss_pred HHHHhcc
Q 014342 394 TALAKDK 400 (426)
Q Consensus 394 ~~~~~~~ 400 (426)
++.+...
T Consensus 280 l~~l~~~ 286 (296)
T 3ddj_A 280 LIALHHI 286 (296)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9987654
No 8
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.88 E-value=3.3e-22 Score=190.27 Aligned_cols=193 Identities=19% Similarity=0.344 Sum_probs=151.2
Q ss_pred cccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhcccc
Q 014342 154 THTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHT 233 (426)
Q Consensus 154 ~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~ 233 (426)
..++.++|.+ ++++++.+.++.+|+++|.+++++++||+|+ .++++|++|..|++..+...... ..+
T Consensus 83 ~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~~----------~~~ 149 (280)
T 3kh5_A 83 NEPVREIMEE--NVITLKENADIDEAIETFLTKNVGGAPIVND-ENQLISLITERDVIRALLDKIDE----------NEV 149 (280)
T ss_dssp TSBGGGTSBC--SCCCEETTCBHHHHHHHHHHTTCSEEEEECT-TCBEEEEEEHHHHHHHHGGGSCT----------TCB
T ss_pred hhhHHHhcCC--CCEEECCCCCHHHHHHHHHhCCCCEEEEEcC-CCEEEEEEEHHHHHHHHhhcCCC----------CCC
Confidence 4688999986 6788999999999999999999999999986 47999999999988765422110 001
Q ss_pred hhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHH
Q 014342 234 ISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCI 313 (426)
Q Consensus 234 i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l 313 (426)
+.. .|.++++++.+++++.+|++.|.+++++++||++ +| +++|++|.+|+++.+
T Consensus 150 v~~-------------------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~----~~---~~~Givt~~dl~~~~ 203 (280)
T 3kh5_A 150 IDD-------------------YITRDVIVATPGERLKDVARTMVRNGFRRLPVVS----EG---RLVGIITSTDFIKLL 203 (280)
T ss_dssp SGG-------------------GCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE----TT---EEEEEEEHHHHHHHH
T ss_pred HHH-------------------HhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE----CC---EEEEEEEHHHHHHHH
Confidence 111 2456788999999999999999999999999993 35 799999999999987
Q ss_pred Hhhccc--c--CCCccccccccccccccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEe
Q 014342 314 CRHFKH--S--SSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYS 389 (426)
Q Consensus 314 ~~~~~~--~--~~~~~~~~~~v~~l~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis 389 (426)
...... . .........++.++| .++++++++++++.+|+++|.+++++++||+|++|+++|+||
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~v~~~m------------~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Givt 271 (280)
T 3kh5_A 204 GSDWAFNHMQTGNVREITNVRMEEIM------------KRDVITAKEGDKLKKIAEIMVTNDIGALPVVDENLRIKGIIT 271 (280)
T ss_dssp TSHHHHHHHHSCCTHHHHHCBHHHHS------------BSSCCCBCTTCBHHHHHHHHHHHTCCEEEEECTTCBEEEEEE
T ss_pred hhhhhhhhhcccchhhhhCCcHHHHh------------cCCCEEECCCCCHHHHHHHHHHCCCCEEEEECCCCeEEEEEe
Confidence 543210 0 000011233444443 257889999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 014342 390 RSDITALA 397 (426)
Q Consensus 390 ~~DI~~~~ 397 (426)
++||++.+
T Consensus 272 ~~dil~~l 279 (280)
T 3kh5_A 272 EKDVLKYF 279 (280)
T ss_dssp HHHHGGGG
T ss_pred HHHHHHhh
Confidence 99998753
No 9
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.88 E-value=6.9e-22 Score=192.70 Aligned_cols=201 Identities=16% Similarity=0.131 Sum_probs=150.7
Q ss_pred ccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCC----cEEEEeehHHHHHHHHHhccCCCCCChhhhccc
Q 014342 157 VYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKG----RFVGVLSALDFILILRELGTNGSNLTEEELETH 232 (426)
Q Consensus 157 ~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~----~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~ 232 (426)
+.++|+. .+++++++.++.+|++.|.+++++.+||+|++.+ +++|++|..|++..+...... ......
T Consensus 116 ~~~~~~~--~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~------~~~~~~ 187 (323)
T 3t4n_C 116 ALGVDQL--DTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRE------THFLKI 187 (323)
T ss_dssp HTTC------CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGG------GGGCCS
T ss_pred HhCCCCC--CceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCCc------hhhhhC
Confidence 3445544 6788899999999999999999999999996422 399999999999877543211 111111
Q ss_pred chhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHH
Q 014342 233 TISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKC 312 (426)
Q Consensus 233 ~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~ 312 (426)
++..+ + ..|.++++++.+++++.+|++.|.+++++++||+| ++| +++|++|.+|++++
T Consensus 188 ~v~~~-------~---------~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd---~~~---~~~Giit~~dl~~~ 245 (323)
T 3t4n_C 188 PIGDL-------N---------IITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIID---ENG---YLINVYEAYDVLGL 245 (323)
T ss_dssp BGGGT-------T---------CSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEEC---TTC---BEEEEEETTHHHHH
T ss_pred cHHHc-------C---------CCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEEC---CCC---eEEEEEeHHHHHHH
Confidence 22211 0 12567889999999999999999999999999995 245 79999999999998
Q ss_pred HHhhccccCCCccccccccccccccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHH
Q 014342 313 ICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSD 392 (426)
Q Consensus 313 l~~~~~~~~~~~~~~~~~v~~l~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~D 392 (426)
+..... ..+..++.+++.... ...++++++.+++++.+|+++|.+++++++||||++|+++|+||.+|
T Consensus 246 ~~~~~~------~~~~~~v~~~m~~~~------~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~l~Giit~~D 313 (323)
T 3t4n_C 246 IKGGIY------NDLSLSVGEALMRRS------DDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSD 313 (323)
T ss_dssp HHTTHH------HHTTSBHHHHGGGSC------TTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECTTSBEEEEEEHHH
T ss_pred Hhhchh------hhccCCHHHHHhhcc------ccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECCCCcEEEEEEHHH
Confidence 765321 112445555542110 00126889999999999999999999999999999999999999999
Q ss_pred HHHHHhc
Q 014342 393 ITALAKD 399 (426)
Q Consensus 393 I~~~~~~ 399 (426)
|++.+..
T Consensus 314 il~~l~~ 320 (323)
T 3t4n_C 314 ILKYILL 320 (323)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9997754
No 10
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.88 E-value=1.2e-22 Score=195.73 Aligned_cols=195 Identities=12% Similarity=0.142 Sum_probs=151.2
Q ss_pred cccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhcccc
Q 014342 154 THTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHT 233 (426)
Q Consensus 154 ~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~ 233 (426)
..++.|+|.. ++++++++.|+.+|+++|.+++++++||+| ++++|++|..|++..+...... ... ...+.
T Consensus 19 ~~~V~dim~~--~~~~v~~~~~v~~a~~~m~~~~~~~~~V~d---~~l~GivT~~Di~~~~~~~~~~-~~~-~~~~~--- 88 (296)
T 3ddj_A 19 GMNIETLMIK--NPPILSKEDRLGSAFKKINEGGIGRIIVAN---EKIEGLLTTRDLLSTVESYCKD-SCS-QGDLY--- 88 (296)
T ss_dssp CSSGGGTCEE--SCCEECTTSBHHHHHHHTTGGGCCEEEEES---SSEEEEEEHHHHHGGGTTCC----CC-HHHHH---
T ss_pred ccCHHHhccC--CCcEECCCccHHHHHHHHHHCCCceEEEEC---CeEEEEEeHHHHHHHhcccccc-ccc-chhhH---
Confidence 5678999976 788999999999999999999999999998 6899999999988755321100 000 00000
Q ss_pred hhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHH
Q 014342 234 ISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCI 313 (426)
Q Consensus 234 i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l 313 (426)
........ ..|.++++++.+++++.+|++.|.+++++++||+|+ ++ +++|++|..|+++++
T Consensus 89 -~~~~~~v~------------~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~---~~---~lvGivt~~dl~~~~ 149 (296)
T 3ddj_A 89 -HISTTPII------------DYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDI---ND---KPVGIVTEREFLLLY 149 (296)
T ss_dssp -HHHTSBGG------------GTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHGGGG
T ss_pred -HHhcccHH------------HhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcC---CC---cEEEEEeHHHHHHhh
Confidence 00000011 135678889999999999999999999999999952 35 699999999998865
Q ss_pred HhhccccCCCccccccccccccccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHH
Q 014342 314 CRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDI 393 (426)
Q Consensus 314 ~~~~~~~~~~~~~~~~~v~~l~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI 393 (426)
.... ...++.++|. ++++++.+++++.+|+++|.+++++++||+|++|+++|+||.+||
T Consensus 150 ~~~~---------~~~~v~~~m~------------~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl 208 (296)
T 3ddj_A 150 KDLD---------EIFPVKVFMS------------TKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNA 208 (296)
T ss_dssp GGSC---------CCCBHHHHSB------------CSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHH
T ss_pred hccc---------ccccHHHhhc------------CCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHH
Confidence 4321 1234555442 477889999999999999999999999999999999999999999
Q ss_pred HHHHh
Q 014342 394 TALAK 398 (426)
Q Consensus 394 ~~~~~ 398 (426)
++.+.
T Consensus 209 ~~~~~ 213 (296)
T 3ddj_A 209 IKQLA 213 (296)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98765
No 11
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=99.86 E-value=6e-22 Score=190.89 Aligned_cols=87 Identities=26% Similarity=0.523 Sum_probs=79.7
Q ss_pred CCcceEEEEEecC-CCceEEEEeccCCCCCCCCCCCCCCCCCeEEEEEecCCceEEEEEEEcCeeecCCCCCee-eCCCC
Q 014342 17 GSILVPVRFIWPN-GGRRVSLSGSFTRWSEPMPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEWRHDENQPHV-SGNYG 94 (426)
Q Consensus 17 ~~~~~~v~f~~~~-~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~~~~~~~L~~g~y~ykFiVDg~w~~d~~~p~~-~d~~G 94 (426)
+..+++++|+|++ +|++|+|+||||||+..++|.+.+ ++|.|++++.||||.|+|||+|||+|++||++|.. .|++|
T Consensus 166 ~~~k~~v~f~~~~~~~~~V~v~GsF~~W~~~~~l~k~~-~~g~~~~~~~L~~G~y~YkFiVDG~w~~d~~~~~~~~d~~G 244 (294)
T 3nme_A 166 GLKRKTVTLTLKDKGFSRVEISGLDIGWGQRIPLTLGK-GTGFWILKRELPEGQFEYKYIIDGEWTHNEAEPFIGPNKDG 244 (294)
T ss_dssp CCCCEEEEEEEECSSCSCEEEEETTTEEEEEEECEECT-TTCEEEEEEEECSEEEEEEEEETTEEECCTTSCEECSCTTS
T ss_pred ccccccceeeeccCCCCEEEEEEeccCCCCcccceEcC-CCCEEEEEEECCCceEEEEEEECCEEeeCCCCCeeeECCCC
Confidence 4567999999999 689999999999999778999865 37999999999999999999999999999999976 79999
Q ss_pred CeeeEEEeccC
Q 014342 95 VVNCVYIAVPQ 105 (426)
Q Consensus 95 ~~nn~~~v~~~ 105 (426)
+.||+|.| ++
T Consensus 245 ~~nn~~~v-~~ 254 (294)
T 3nme_A 245 HTNNYAKV-VD 254 (294)
T ss_dssp CCEEEEEE-CC
T ss_pred CEeEEEEE-CC
Confidence 99999999 53
No 12
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.86 E-value=2.1e-21 Score=185.21 Aligned_cols=195 Identities=17% Similarity=0.253 Sum_probs=141.6
Q ss_pred ccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHH-HHHHhccCCCCCChhhhcccc
Q 014342 155 HTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFIL-ILRELGTNGSNLTEEELETHT 233 (426)
Q Consensus 155 ~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~-~l~~~~~~~~~~~~~~l~~~~ 233 (426)
.++.++|.. .+++++++.++.+|++.|.++++..+||+|++ ++++|++|..|++. .+... ......+
T Consensus 60 ~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~-~~~~Giit~~di~~~~~~~~---------~~~~~~~ 127 (282)
T 2yzq_A 60 EQLAMLVKR--DVPVVKENDTLKKAAKLMLEYDYRRVVVVDSK-GKPVGILTVGDIIRRYFAKS---------EKYKGVE 127 (282)
T ss_dssp ----CCCBS--CCCEEETTSBHHHHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHTTTTC---------SGGGGCB
T ss_pred CCHHHHcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHhcc---------CCcccCc
Confidence 567777765 46788999999999999999999999999964 78999999999875 43210 0000111
Q ss_pred hhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHH---
Q 014342 234 ISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDIL--- 310 (426)
Q Consensus 234 i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil--- 310 (426)
+. ..|..+++++.+++++.+|++.|.+++++++||+| +.| +++|++|..|++
T Consensus 128 v~-------------------~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd---~~~---~~~Giit~~dl~~~~ 182 (282)
T 2yzq_A 128 IE-------------------PYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVD---SEG---NLVGIVDETDLLRDS 182 (282)
T ss_dssp ST-------------------TTSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEEC---TTS---CEEEEEEGGGGGGCG
T ss_pred HH-------------------HHhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEc---CCC---eEEEEEEHHHHhhhh
Confidence 11 12456788999999999999999999999999995 235 699999999998
Q ss_pred ---HHHHhhc---c--------ccC------CCccccccccccccccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhc
Q 014342 311 ---KCICRHF---K--------HSS------SSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQA 370 (426)
Q Consensus 311 ---~~l~~~~---~--------~~~------~~~~~~~~~v~~l~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~ 370 (426)
+++..+. . ... ........+++++ |.++++++++++++.+|+++|.++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i------------m~~~~~~v~~~~~l~~a~~~m~~~ 250 (282)
T 2yzq_A 183 EIVRIMKSTELAASSEEEWILESHPTLLFEKFELQLPNKPVAEI------------MTRDVIVATPHMTVHEVALKMAKY 250 (282)
T ss_dssp GGCC--------------------------------CCCBGGGT------------CBSSCCCBCTTSBHHHHHHHHHHH
T ss_pred hhhhhhccchhhhhhhhhhhcccchHHHHhHhhhhhccCCHHHh------------cCCCCceeCCCCCHHHHHHHHHHc
Confidence 5442100 0 000 0001122333333 346888999999999999999999
Q ss_pred CCcEeeEEcCCCcEEEEEeHHHHHHHHh
Q 014342 371 DVSSIPIVDDNDSLLDIYSRSDITALAK 398 (426)
Q Consensus 371 ~i~~lPVVd~~g~lvGiis~~DI~~~~~ 398 (426)
+++++||+|++|+++|+||++||++.+.
T Consensus 251 ~~~~lpVvd~~~~lvGiit~~Dil~~~~ 278 (282)
T 2yzq_A 251 SIEQLPVIRGEGDLIGLIRDFDLLKVLV 278 (282)
T ss_dssp TCSEEEEEETTTEEEEEEEHHHHGGGGC
T ss_pred CcceeEEECCCCCEEEEEeHHHHHHHHH
Confidence 9999999998889999999999997554
No 13
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.85 E-value=2.5e-20 Score=182.49 Aligned_cols=201 Identities=16% Similarity=0.125 Sum_probs=150.7
Q ss_pred cCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCc----EEEEeehHHHHHHHHHhccCCCCCChhhhcccchh
Q 014342 160 LLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGR----FVGVLSALDFILILRELGTNGSNLTEEELETHTIS 235 (426)
Q Consensus 160 ~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~----~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i~ 235 (426)
+|.....++++.++.++.+|++.|.+++++.+||+|+..++ ++|++|..|++..+...... ......++.
T Consensus 112 im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~~~~~------~~~~~~~v~ 185 (334)
T 2qrd_G 112 IGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMNCKE------TAMLRVPLN 185 (334)
T ss_dssp HTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHHHCGG------GGGCCCBGG
T ss_pred hccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHhhccc------hhhhhCcHH
Confidence 45454455888999999999999999999999999965445 99999999998776532110 001111111
Q ss_pred hhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHh
Q 014342 236 AWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICR 315 (426)
Q Consensus 236 ~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~ 315 (426)
.+ + ..|.++++++.+++++.+|++.|.+++++++||+| ++| +++|+||..|+++++..
T Consensus 186 ~l-------~---------~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd---~~~---~~~Giit~~dl~~~~~~ 243 (334)
T 2qrd_G 186 QM-------T---------IGTWSNLATASMETKVYDVIKMLAEKNISAVPIVN---SEG---TLLNVYESVDVMHLIQD 243 (334)
T ss_dssp GS-------S---------CSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEC---TTC---BEEEEEETHHHHHHHTT
T ss_pred Hh-------C---------CcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEc---CCC---cEEEEEEHHHHHHHhhc
Confidence 11 0 02567888999999999999999999999999995 245 79999999999998754
Q ss_pred hccccCCCccccccccccccccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHH
Q 014342 316 HFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITA 395 (426)
Q Consensus 316 ~~~~~~~~~~~~~~~v~~l~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~ 395 (426)
... .....++.++|.... .+ .++++++.+++++.+|+++|.+++++++||||++|+++|+||++||++
T Consensus 244 ~~~------~~~~~~v~~~m~~~~----~~--~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~l~Giit~~dil~ 311 (334)
T 2qrd_G 244 GDY------SNLDLSVGEALLKRP----AN--FDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLEGILSLADILN 311 (334)
T ss_dssp SCG------GGGGSBHHHHHTTCC----TT--CCCCCEECTTCBHHHHHHHHHHSCCCEEEEECTTCBEEEEEEHHHHHH
T ss_pred ccc------ccccCcHHHHHhccc----cc--CCCCEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHH
Confidence 321 112344555442100 00 036789999999999999999999999999999999999999999999
Q ss_pred HHhcc
Q 014342 396 LAKDK 400 (426)
Q Consensus 396 ~~~~~ 400 (426)
.+...
T Consensus 312 ~~~~~ 316 (334)
T 2qrd_G 312 YIIYD 316 (334)
T ss_dssp HHHSC
T ss_pred HHHhc
Confidence 87654
No 14
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.85 E-value=1.3e-20 Score=184.22 Aligned_cols=203 Identities=16% Similarity=0.149 Sum_probs=152.1
Q ss_pred cccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhcccchhhh
Q 014342 158 YELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTISAW 237 (426)
Q Consensus 158 ~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i~~~ 237 (426)
.++|.. .+++++++.++.+|++.|.+++++.+||+|++.++++|+||..|++..+....... .. ..+...++..
T Consensus 121 ~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl~~~~~~~~~~~-~~--~~~~~~~v~~- 194 (330)
T 2v8q_E 121 LQDSFK--PLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRILKFLKLFITEF-PK--PEFMSKSLEE- 194 (330)
T ss_dssp SSSSCC--CCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHHHHHHHHHHHSCSS-SC--CGGGGSBHHH-
T ss_pred hhcccC--CceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHHHHHHHHHhhcc-Cc--hhhhcCCHHH-
Confidence 355654 58889999999999999999999999999963579999999999998775432211 01 1111111111
Q ss_pred HHHHHhhccccccCCCCCCCC-CCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhh
Q 014342 238 KVGKLQLNLKRQMDGNGRPCP-RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRH 316 (426)
Q Consensus 238 ~~~~~~~~~~~~~~g~~~~~~-~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~ 316 (426)
+. .|. .+++++.+++++.+|++.|.+++++++||+| ++| +++|+||..|+++.+...
T Consensus 195 ------~~----------v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd---~~~---~l~Giit~~dl~~~~~~~ 252 (330)
T 2v8q_E 195 ------LQ----------IGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVD---EKG---RVVDIYSKFDVINLAAEK 252 (330)
T ss_dssp ------HT----------CSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEEC---TTS---BEEEEEEGGGTGGGGGSS
T ss_pred ------hc----------ccCcCCceEECCCCCHHHHHHHHHHcCCCeEEEEC---CCC---cEEEEEEHHHHHHHHhcc
Confidence 11 123 5678899999999999999999999999995 235 799999999999865432
Q ss_pred ccccCCCccccccccccccccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHH
Q 014342 317 FKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITAL 396 (426)
Q Consensus 317 ~~~~~~~~~~~~~~v~~l~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~ 396 (426)
.. .....++.+++-. ...+.++++++.+++++.+|+++|.+++++++||+|++|+++|+||++||++.
T Consensus 253 ~~------~~~~~~v~~~~~~------~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~l~Giit~~Dil~~ 320 (330)
T 2v8q_E 253 TY------NNLDVSVTKALQH------RSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQA 320 (330)
T ss_dssp CC------CCCSSBHHHHGGG------CCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHH
T ss_pred cc------ccccCcHHHHHhc------cccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcCCCcEEEEEeHHHHHHH
Confidence 10 1123444444310 11223688899999999999999999999999999999999999999999997
Q ss_pred Hhcc
Q 014342 397 AKDK 400 (426)
Q Consensus 397 ~~~~ 400 (426)
+...
T Consensus 321 ~~~~ 324 (330)
T 2v8q_E 321 LVLT 324 (330)
T ss_dssp HHSS
T ss_pred HHhh
Confidence 7654
No 15
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.81 E-value=3.2e-20 Score=177.03 Aligned_cols=177 Identities=16% Similarity=0.291 Sum_probs=127.3
Q ss_pred cccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhcccchh
Q 014342 156 TVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTIS 235 (426)
Q Consensus 156 ~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i~ 235 (426)
++.|+|. .++++++++.|+.+|+++|.++++.++||+|+ +++++|++|..|++..+. ..+++
T Consensus 2 ~v~~im~--~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~-~~~~~Giv~~~dl~~~~~---------------~~~v~ 63 (282)
T 2yzq_A 2 RVKTIMT--QNPVTITLPATRNYALELFKKYKVRSFPVVNK-EGKLVGIISVKRILVNPD---------------EEQLA 63 (282)
T ss_dssp BHHHHSE--ESCCCEESSCC------------CCEEEEECT-TCCEEEEEESSCC-------------------------
T ss_pred chHHhcc--CCCeEECCCCcHHHHHHHHHHcCCCeEEEEcC-CCcEEEEEEHHHHHhhhc---------------cCCHH
Confidence 3456675 36788999999999999999999999999996 579999999999764321 00111
Q ss_pred hhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHH-HHH
Q 014342 236 AWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILK-CIC 314 (426)
Q Consensus 236 ~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~-~l~ 314 (426)
. .|.++++++.+++++.+|++.|.+++++++||+|+ +| +++|++|..|+++ ++.
T Consensus 64 ~-------------------~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~---~~---~~~Giit~~di~~~~~~ 118 (282)
T 2yzq_A 64 M-------------------LVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDS---KG---KPVGILTVGDIIRRYFA 118 (282)
T ss_dssp C-------------------CCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHHHTTT
T ss_pred H-------------------HcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---EEEEEEEHHHHHHHHHh
Confidence 1 24556788999999999999999999999999952 35 6999999999998 654
Q ss_pred hhccccCCCccccccccccccccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHH
Q 014342 315 RHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDIT 394 (426)
Q Consensus 315 ~~~~~~~~~~~~~~~~v~~l~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~ 394 (426)
... .....++.++| .++++++.+++++.+|++.|.+++++++||+|++|+++|+||.+||+
T Consensus 119 ~~~-------~~~~~~v~~~m------------~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~ 179 (282)
T 2yzq_A 119 KSE-------KYKGVEIEPYY------------QRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLL 179 (282)
T ss_dssp TCS-------GGGGCBSTTTS------------BSCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGG
T ss_pred ccC-------CcccCcHHHHh------------CCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHh
Confidence 320 11233444444 24777899999999999999999999999999889999999999998
No 16
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.75 E-value=1.3e-18 Score=153.87 Aligned_cols=151 Identities=17% Similarity=0.295 Sum_probs=111.5
Q ss_pred HHHHHHHHHhccccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccC--
Q 014342 143 LSRDRISSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTN-- 220 (426)
Q Consensus 143 ~~~~~~~~~l~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~-- 220 (426)
+.++++.+.|.+.++.|+|.. ++++++++.|+.+|+++|.+++++++||+|+ +|+++|+||.+|++..+......
T Consensus 6 ~~~~~~~~~l~~~~V~diM~~--~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~-~g~lvGiit~~Dll~~~~~~~~~~~ 82 (170)
T 4esy_A 6 ARRRAIARAIRQVPIRDILTS--PVVTVREDDTLDAVAKTMLEHQIGCAPVVDQ-NGHLVGIITESDFLRGSIPFWIYEA 82 (170)
T ss_dssp HHHHHHHHHHHTSBGGGGCCS--CCCCEETTSBHHHHHHHHHHTTCSEEEEECT-TSCEEEEEEGGGGGGGTCCTTHHHH
T ss_pred HHHHHHHHHHcCCCHHHhcCC--CCcEECCcCcHHHHHHHHHHcCCeEEEEEcC-CccEEEEEEHHHHHHHHhhccccch
Confidence 357788999999999999975 7899999999999999999999999999996 57999999999987532110000
Q ss_pred ----CCCCChhhhcccchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCC
Q 014342 221 ----GSNLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGS 296 (426)
Q Consensus 221 ----~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~ 296 (426)
........ .....+...... . ...|+++++++.+++++.+|+++|.+++++++||++ +|
T Consensus 83 ~~~~~~~~~~~~-----~~~~~~~~~~~~---v----~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd----~g- 145 (170)
T 4esy_A 83 SEILSRAIPAPE-----VEHLFETGRKLT---A----SAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ----DG- 145 (170)
T ss_dssp HHHHTTTSCHHH-----HHHHHHHHTTCB---H----HHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE----TT-
T ss_pred hhhhhhccchhh-----HHhhhccccccc---h----hhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE----CC-
Confidence 00000000 000000000000 0 013678999999999999999999999999999995 26
Q ss_pred cceEEEEecHHhHHHHHHh
Q 014342 297 CQEILYLASLSDILKCICR 315 (426)
Q Consensus 297 ~~~lvGiit~~dil~~l~~ 315 (426)
+++||||++||++++..
T Consensus 146 --~lvGivt~~Dil~~l~~ 162 (170)
T 4esy_A 146 --VPVGIVTRRDLLKLLLL 162 (170)
T ss_dssp --EEEEEEEHHHHTTTSCC
T ss_pred --EEEEEEEHHHHHHHHHh
Confidence 79999999999987653
No 17
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.71 E-value=9e-17 Score=150.57 Aligned_cols=215 Identities=14% Similarity=0.223 Sum_probs=129.4
Q ss_pred cccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhcccc
Q 014342 154 THTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHT 233 (426)
Q Consensus 154 ~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~ 233 (426)
..++.|+|.. .++++.++.++.+|+++|.+++++++||+|+ +++++|++|..|++..+....... .......+
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~-~~~l~Giit~~di~~~~~~~~~~~----~~~~~~~~ 78 (245)
T 3l2b_A 6 KLKVEDLEMD--KIAPLAPEVSLKMAWNIMRDKNLKSIPVADG-NNHLLGMLSTSNITATYMDIWDSN----ILAKSATS 78 (245)
T ss_dssp CCBGGGSCCB--CCCCBCTTCBHHHHHHHHHHTTCSEEEEECT-TCBEEEEEEHHHHHHHHHCCCCTT----HHHHTTCC
T ss_pred cCcHHHhcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEcC-CCEEEEEEEHHHHHHHHHHhhhhh----hhhhccCC
Confidence 3578899965 5788999999999999999999999999995 479999999999987764321100 00000001
Q ss_pred hhhhHHHHHhh--cc-c--cccCC------------CCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCC
Q 014342 234 ISAWKVGKLQL--NL-K--RQMDG------------NGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGS 296 (426)
Q Consensus 234 i~~~~~~~~~~--~~-~--~~~~g------------~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~ 296 (426)
+..+....... .. . ....| ...+....++.+. + -.++...+++.+++++++.++......
T Consensus 79 ~~~v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvg-d--r~~~~~~~i~~~~~~liit~~~~~~~~ 155 (245)
T 3l2b_A 79 LDNILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAG-D--RAEIQAELIELKVSLLIVTGGHTPSKE 155 (245)
T ss_dssp HHHHHHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEEC-S--CHHHHHHHHHTTCSEEEECTTCCCCHH
T ss_pred HHHHHHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEEC-C--CHHHHHHHHHcCCCEEEECCCCCCCHH
Confidence 11111100000 00 0 00000 0001123344332 2 368889999999999998842111000
Q ss_pred ------cceEEEEecHHhHHHHHHhhccccCCCccccccccccccccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhc
Q 014342 297 ------CQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQA 370 (426)
Q Consensus 297 ------~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~ 370 (426)
...+-.+.|..|........ ....+++++|.. ++++++++++++.+|+++|.++
T Consensus 156 v~~~a~~~~~~~i~t~~d~~~~~~~~---------~~~~~v~~im~~-----------~~~~~~~~~~~~~~~~~~m~~~ 215 (245)
T 3l2b_A 156 IIELAKKNNITVITTPHDSFTASRLI---------VQSLPVDYVMTK-----------DNLVAVSTDDLVEDVKVTMSET 215 (245)
T ss_dssp HHHHHHHHTCEEEECSSCHHHHHHHG---------GGGSBHHHHSBC-----------TTCCCEETTSBHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEeCCChHHHHHHH---------hcCCceeeEecC-----------CccEEECCCCcHHHHHHHHHhc
Confidence 00134455555544432211 113344444420 4778999999999999999999
Q ss_pred CCcEeeEEcCCCcEEEEEeHHHHHHHHh
Q 014342 371 DVSSIPIVDDNDSLLDIYSRSDITALAK 398 (426)
Q Consensus 371 ~i~~lPVVd~~g~lvGiis~~DI~~~~~ 398 (426)
+++++||||++|+++|+||++||++..+
T Consensus 216 ~~~~~pVvd~~~~~~Giit~~dll~~~~ 243 (245)
T 3l2b_A 216 RYSNYPVIDENNKVVGSIARFHLISTHK 243 (245)
T ss_dssp CCSEEEEECTTCBEEEEEECC-------
T ss_pred CCceEEEEcCCCeEEEEEEHHHhhchhh
Confidence 9999999999999999999999997654
No 18
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.69 E-value=2.4e-17 Score=145.80 Aligned_cols=129 Identities=21% Similarity=0.353 Sum_probs=96.5
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhcccc-----CCCcc-----
Q 014342 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHS-----SSSLP----- 325 (426)
Q Consensus 256 ~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~-----~~~~~----- 325 (426)
.|+++++++.+++++.+|++.|.+++++++||+| ++| +++|+||.+||++.+....... .....
T Consensus 23 iM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd---~~g---~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (170)
T 4esy_A 23 ILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVD---QNG---HLVGIITESDFLRGSIPFWIYEASEILSRAIPAPEVE 96 (170)
T ss_dssp GCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEEC---TTS---CEEEEEEGGGGGGGTCCTTHHHHHHHHTTTSCHHHHH
T ss_pred hcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEc---CCc---cEEEEEEHHHHHHHHhhccccchhhhhhhccchhhHH
Confidence 3688999999999999999999999999999995 346 7999999999987543221000 00000
Q ss_pred ccccccccccccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHh
Q 014342 326 ILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (426)
Q Consensus 326 ~~~~~v~~l~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~ 398 (426)
.+........ +.+.|.++++++++++++.+|+++|.+++++++||+| +|+++|+||++||++++.
T Consensus 97 ~~~~~~~~~~-------v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd-~g~lvGivt~~Dil~~l~ 161 (170)
T 4esy_A 97 HLFETGRKLT-------ASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ-DGVPVGIVTRRDLLKLLL 161 (170)
T ss_dssp HHHHHHTTCB-------HHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHTTTSC
T ss_pred hhhccccccc-------hhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 0000000111 1223447899999999999999999999999999998 599999999999997543
No 19
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.69 E-value=1e-16 Score=140.08 Aligned_cols=120 Identities=17% Similarity=0.223 Sum_probs=97.5
Q ss_pred CCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCcccccccccccccc
Q 014342 258 PRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLG 337 (426)
Q Consensus 258 ~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i~ 337 (426)
...++++.+++|+.+|+.+|.+++++++||+| +++ +++|++|.+|+++++....... ......++.++|
T Consensus 24 ~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd---~~~---~lvGiit~~Di~~~~~~~~~~~---~~~~~~~v~~im-- 92 (156)
T 3k6e_A 24 AKNLAVLIDTHNADHATLLLSQMTYTRVPVVT---DEK---QFVGTIGLRDIMAYQMEHDLSQ---EIMADTDIVHMT-- 92 (156)
T ss_dssp TTSSCCEETTSBHHHHHHHHTTSSSSEEEEEC---C-C---BEEEEEEHHHHHHHHHHHTCCH---HHHTTSBGGGTC--
T ss_pred hhHeEEECCcCCHHHHHHHHHHcCCcEEEEEc---CCC---cEEEEEEecchhhhhhhccccc---ccccccCHHHhh--
Confidence 45788999999999999999999999999995 235 7999999999999876542210 112234454444
Q ss_pred ccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhcc
Q 014342 338 TWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDK 400 (426)
Q Consensus 338 ~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~~ 400 (426)
.++++++++++++.+|+++|.++++ +||||++|+++|+||++||++.+...
T Consensus 93 ----------~~~~~~v~~~~~l~~~~~~m~~~~~--lpVVd~~g~l~GiiT~~Dil~~~~~~ 143 (156)
T 3k6e_A 93 ----------KTDVAVVSPDFTITEVLHKLVDESF--LPVVDAEGIFQGIITRKSILKAVNAL 143 (156)
T ss_dssp ----------BCSCCCBCTTCCHHHHHHHTTTSSE--EEEECTTSBEEEEEEHHHHHHHHHHH
T ss_pred ----------cCCceecccccHHHHHHHHHHHcCC--eEEEecCCEEEEEEEHHHHHHHHHHH
Confidence 3688899999999999999998775 99999999999999999999977543
No 20
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.68 E-value=2e-16 Score=133.27 Aligned_cols=113 Identities=12% Similarity=0.151 Sum_probs=95.3
Q ss_pred CCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccccc
Q 014342 259 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 338 (426)
Q Consensus 259 ~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i~~ 338 (426)
.+++++.+++++.+|++.|.+++++++||+++ +.+ +++|++|.+|+++.+..... ..++.++|
T Consensus 16 ~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--~~~---~~~Givt~~dl~~~~~~~~~---------~~~v~~~m--- 78 (130)
T 3i8n_A 16 PVVFRVDATMTINEFLDKHKDTPFSRPLVYSE--QKD---NIIGFVHRLELFKMQQSGSG---------QKQLGAVM--- 78 (130)
T ss_dssp CCCCEEETTSBHHHHHHHTTTCSCSCCEEESS--STT---CEEEECCHHHHHHHHHTTTT---------TSBHHHHS---
T ss_pred HHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeC--CCC---cEEEEEEHHHHHHHHhcCCC---------cCCHHHHh---
Confidence 45678999999999999999999999999952 225 69999999999998764321 23444444
Q ss_pred cccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHh
Q 014342 339 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (426)
Q Consensus 339 ~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~ 398 (426)
++++++.+++++.+|+++|.+++++.+||+|++|+++|+||+.||++.+.
T Consensus 79 ----------~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~ 128 (130)
T 3i8n_A 79 ----------RPIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLV 128 (130)
T ss_dssp ----------EECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred ----------cCCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHc
Confidence 25678999999999999999999999999999999999999999998654
No 21
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.68 E-value=4.3e-16 Score=134.22 Aligned_cols=115 Identities=14% Similarity=0.156 Sum_probs=97.8
Q ss_pred CCC--CceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccc
Q 014342 257 CPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSI 334 (426)
Q Consensus 257 ~~~--~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l 334 (426)
|++ +++++.+++++.+|++.|.+++++++||+++ +.| +++|++|..|+++.+.... ..++.++
T Consensus 29 M~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--~~~---~lvGivt~~dl~~~~~~~~----------~~~v~~~ 93 (148)
T 3lv9_A 29 MVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRK--NKD---DILGFVHIRDLYNQKINEN----------KIELEEI 93 (148)
T ss_dssp SEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESS--STT---SEEEEEEHHHHHHHHHHHS----------CCCGGGT
T ss_pred cccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcC--CCC---cEEEEEEHHHHHHHHhcCC----------CccHHHh
Confidence 455 7889999999999999999999999999952 225 6999999999999876542 2334444
Q ss_pred cccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhc
Q 014342 335 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (426)
Q Consensus 335 ~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~ 399 (426)
| ++++++.+++++.+|+++|.+++++.+||+|++|+++|+||+.||++.+..
T Consensus 94 m-------------~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~ 145 (148)
T 3lv9_A 94 L-------------RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIVG 145 (148)
T ss_dssp C-------------BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHHH
T ss_pred c-------------CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 3 377899999999999999999999999999999999999999999987654
No 22
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.68 E-value=1.9e-16 Score=133.75 Aligned_cols=116 Identities=8% Similarity=0.119 Sum_probs=96.4
Q ss_pred CCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccccc
Q 014342 259 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 338 (426)
Q Consensus 259 ~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i~~ 338 (426)
.+++++.+++++.+|++.|.+++++++||++ ++.+ +++|++|.+|+++++.... .+...++.++|
T Consensus 12 ~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~--~~~~---~lvGivt~~dl~~~~~~~~-------~~~~~~v~~~m--- 76 (130)
T 3hf7_A 12 NEIVGIDINDDWKSIVRQLTHSPHGRIVLYR--DSLD---DAISMLRVREAYRLMTEKK-------EFTKEIMLRAA--- 76 (130)
T ss_dssp GGCCEEETTSCHHHHHHHHHTCSSSEEEEES--SSGG---GEEEEEEHHHHHHHHTSSS-------CCCHHHHHHHS---
T ss_pred HHEEEEcCCCCHHHHHHHHHHCCCCeEEEEc--CCCC---cEEEEEEHHHHHHHHhccC-------ccchhhHHHhc---
Confidence 3578999999999999999999999999995 2235 7999999999999875421 11123444443
Q ss_pred cccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhc
Q 014342 339 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (426)
Q Consensus 339 ~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~ 399 (426)
++++++.+++++.+|+++|.+++++.+||+|++|+++|+||+.||++.+..
T Consensus 77 ----------~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~g 127 (130)
T 3hf7_A 77 ----------DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVG 127 (130)
T ss_dssp ----------BCCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHHC
T ss_pred ----------cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHhC
Confidence 267789999999999999999999999999999999999999999987654
No 23
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.67 E-value=3.9e-16 Score=129.51 Aligned_cols=114 Identities=19% Similarity=0.345 Sum_probs=97.4
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccc
Q 014342 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 336 (426)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i 336 (426)
|.++++++.+++++.+|++.|.+++++++||++ ++| +++|++|..|+++++.... .++.+++.
T Consensus 7 m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd---~~~---~~~G~vt~~dl~~~~~~~~-----------~~v~~~~~ 69 (122)
T 3kpb_A 7 LSKPPITAHSNISIMEAAKILIKHNINHLPIVD---EHG---KLVGIITSWDIAKALAQNK-----------KTIEEIMT 69 (122)
T ss_dssp CCSCCCCEETTSBHHHHHHHHHHHTCSCEEEEC---TTS---BEEEEECHHHHHHHHHTTC-----------CBGGGTSB
T ss_pred hCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEEC---CCC---CEEEEEEHHHHHHHHHhcc-----------cCHHHHhc
Confidence 467788999999999999999999999999995 245 7999999999999876431 24444442
Q ss_pred cccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhc
Q 014342 337 GTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (426)
Q Consensus 337 ~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~ 399 (426)
+++.++.+++++.+|+++|.+++++++||+|++|+++|+||+.||++.+.+
T Consensus 70 ------------~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 70 ------------RNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp ------------SSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC-
T ss_pred ------------CCCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhhc
Confidence 467789999999999999999999999999998999999999999987654
No 24
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.67 E-value=2.7e-16 Score=132.54 Aligned_cols=126 Identities=13% Similarity=0.249 Sum_probs=101.3
Q ss_pred hccccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhcc
Q 014342 152 LSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELET 231 (426)
Q Consensus 152 l~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~ 231 (426)
|.+.++.|+|.....+++++++.|+.+|+++|.++++.++||+|++.++++|+||..|++..+.... ..
T Consensus 3 l~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~-----------~~ 71 (130)
T 3i8n_A 3 AQDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGS-----------GQ 71 (130)
T ss_dssp ----CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTT-----------TT
T ss_pred cCcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCC-----------Cc
Confidence 6778999999887788899999999999999999999999999965479999999999987654211 01
Q ss_pred cchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHH
Q 014342 232 HTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILK 311 (426)
Q Consensus 232 ~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~ 311 (426)
.++..+ | ++++++.+++++.+|++.|.+++++++||+| ++| +++|+||..||++
T Consensus 72 ~~v~~~-------------------m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd---~~g---~~vGivt~~dil~ 125 (130)
T 3i8n_A 72 KQLGAV-------------------M-RPIQVVLNNTALPKVFDQMMTHRLQLALVVD---EYG---TVLGLVTLEDIFE 125 (130)
T ss_dssp SBHHHH-------------------S-EECCEEETTSCHHHHHHHHHHHTCCEEEEEC---TTS---CEEEEEEHHHHHH
T ss_pred CCHHHH-------------------h-cCCcCcCCCCcHHHHHHHHHHcCCeEEEEEc---CCC---CEEEEEEHHHHHH
Confidence 112222 3 3467899999999999999999999999995 345 7999999999999
Q ss_pred HHH
Q 014342 312 CIC 314 (426)
Q Consensus 312 ~l~ 314 (426)
.+.
T Consensus 126 ~l~ 128 (130)
T 3i8n_A 126 HLV 128 (130)
T ss_dssp HHH
T ss_pred HHc
Confidence 875
No 25
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.67 E-value=3.2e-16 Score=136.88 Aligned_cols=138 Identities=18% Similarity=0.246 Sum_probs=106.6
Q ss_pred HHHHHhccccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCCh
Q 014342 147 RISSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTE 226 (426)
Q Consensus 147 ~~~~~l~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~ 226 (426)
.+.+||. .++.++|.....+++++.+.|+.+|+++|.+++++++||+|+ .++++|+||.+|++..+..... ..
T Consensus 8 ~~e~~l~-~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~-~~~lvGiit~~Di~~~~~~~~~-----~~ 80 (156)
T 3k6e_A 8 EFETFLL-GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD-EKQFVGTIGLRDIMAYQMEHDL-----SQ 80 (156)
T ss_dssp HHHHHHH-TTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTC-----CH
T ss_pred HHHHHhh-ccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcC-CCcEEEEEEecchhhhhhhccc-----cc
Confidence 3445554 457788877778999999999999999999999999999985 5799999999999877654321 11
Q ss_pred hhhcccchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecH
Q 014342 227 EELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASL 306 (426)
Q Consensus 227 ~~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~ 306 (426)
..+...++.. .|.++++++.+++++.+|++.|.+++ .+||+| ++| +++|+||.
T Consensus 81 ~~~~~~~v~~-------------------im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd---~~g---~l~GiiT~ 133 (156)
T 3k6e_A 81 EIMADTDIVH-------------------MTKTDVAVVSPDFTITEVLHKLVDES--FLPVVD---AEG---IFQGIITR 133 (156)
T ss_dssp HHHTTSBGGG-------------------TCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEEC---TTS---BEEEEEEH
T ss_pred ccccccCHHH-------------------hhcCCceecccccHHHHHHHHHHHcC--CeEEEe---cCC---EEEEEEEH
Confidence 1221212111 35788899999999999999999876 499995 346 79999999
Q ss_pred HhHHHHHHhhcc
Q 014342 307 SDILKCICRHFK 318 (426)
Q Consensus 307 ~dil~~l~~~~~ 318 (426)
.||++.+.....
T Consensus 134 ~Dil~~~~~~~~ 145 (156)
T 3k6e_A 134 KSILKAVNALLH 145 (156)
T ss_dssp HHHHHHHHHHSC
T ss_pred HHHHHHHHHHhc
Confidence 999999876544
No 26
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.67 E-value=9.8e-17 Score=136.47 Aligned_cols=116 Identities=12% Similarity=0.167 Sum_probs=94.4
Q ss_pred CCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccccc
Q 014342 259 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 338 (426)
Q Consensus 259 ~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i~~ 338 (426)
.+++++.+++++.+|++.|.+++++++||+++ +.+ +++|+||..|+++++.... ....++.++|
T Consensus 13 ~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~--~~~---~~vGivt~~dl~~~~~~~~--------~~~~~v~~~m--- 76 (136)
T 3lfr_A 13 SQMISIKATQTPREFLPAVIDAAHSRYPVIGE--SHD---DVLGVLLAKDLLPLILKAD--------GDSDDVKKLL--- 76 (136)
T ss_dssp GGCCCEETTCCHHHHHHHHHHHCCSEEEEESS--STT---CEEEEEEGGGGGGGGGSSS--------GGGCCGGGTC---
T ss_pred HHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcC--CCC---cEEEEEEHHHHHHHHHhcc--------CCCcCHHHHc---
Confidence 46788999999999999999999999999952 224 6999999999998754211 1234455544
Q ss_pred cccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhcc
Q 014342 339 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDK 400 (426)
Q Consensus 339 ~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~~ 400 (426)
++++++.+++++.+|+++|.+++++.+||+|++|+++|+||++||++.+...
T Consensus 77 ----------~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~~~ 128 (136)
T 3lfr_A 77 ----------RPATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIVGD 128 (136)
T ss_dssp ----------BCCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC---
T ss_pred ----------CCCeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCC
Confidence 2577999999999999999999999999999999999999999999865543
No 27
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.67 E-value=2.5e-16 Score=132.62 Aligned_cols=112 Identities=12% Similarity=0.186 Sum_probs=93.1
Q ss_pred CCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccccc
Q 014342 259 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 338 (426)
Q Consensus 259 ~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i~~ 338 (426)
.+++++.+++++.+|++.|.+++++++||+++ +.+ +++|++|..|+++++.. ...++.++|
T Consensus 15 ~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--~~~---~~~Givt~~dl~~~~~~-----------~~~~v~~~m--- 75 (129)
T 3jtf_A 15 SRMDLLDISQPLPQLLATIIETAHSRFPVYED--DRD---NIIGILLAKDLLRYMLE-----------PALDIRSLV--- 75 (129)
T ss_dssp GGCCCEETTSCHHHHHHHHHHSCCSEEEEESS--STT---CEEEEEEGGGGGGGGTC-----------TTSCGGGGC---
T ss_pred HHeEEECCCCCHHHHHHHHHHcCCCEEEEEcC--CCC---cEEEEEEHHHHHhHhcc-----------CCcCHHHHh---
Confidence 56788999999999999999999999999952 225 69999999999876431 123344443
Q ss_pred cccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhc
Q 014342 339 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (426)
Q Consensus 339 ~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~ 399 (426)
++++++.+++++.+|+++|.+++++.+||+|++|+++|+||+.||++.+..
T Consensus 76 ----------~~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~g 126 (129)
T 3jtf_A 76 ----------RPAVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIVG 126 (129)
T ss_dssp ----------BCCCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHHH
T ss_pred ----------CCCeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 256789999999999999999999999999999999999999999987654
No 28
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.66 E-value=1.8e-16 Score=133.10 Aligned_cols=116 Identities=17% Similarity=0.199 Sum_probs=97.0
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccc
Q 014342 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 336 (426)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i 336 (426)
|.+++.++.+++++.+|++.|.+++++++||+| + | +++|++|..|+++.+..... ...++.++|.
T Consensus 11 m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd---~-~---~~~Givt~~dl~~~~~~~~~--------~~~~v~~~m~ 75 (128)
T 3gby_A 11 AETDYPVFTLGGSTADAARRLAASGCACAPVLD---G-E---RYLGMVHLSRLLEGRKGWPT--------VKEKLGEELL 75 (128)
T ss_dssp CBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEE---T-T---EEEEEEEHHHHHTTCSSSCC--------TTCBCCGGGC
T ss_pred hcCCcceECCCCCHHHHHHHHHHCCCcEEEEEE---C-C---EEEEEEEHHHHHHHHhhCCc--------ccCcHHHHcc
Confidence 567788999999999999999999999999996 2 5 79999999999875432211 1134444442
Q ss_pred cccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhc
Q 014342 337 GTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (426)
Q Consensus 337 ~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~ 399 (426)
+++.++.+++++.+|+++|.+++++++||+|++|+++|+||++||++.+.+
T Consensus 76 ------------~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 76 ------------ETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLAE 126 (128)
T ss_dssp ------------BCCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHHT
T ss_pred ------------CCCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 467789999999999999999999999999999999999999999987754
No 29
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.66 E-value=1.7e-16 Score=133.22 Aligned_cols=111 Identities=13% Similarity=0.162 Sum_probs=92.7
Q ss_pred CceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCcccccccccccccccc
Q 014342 260 PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTW 339 (426)
Q Consensus 260 ~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i~~~ 339 (426)
+++++.+++++.+|++.|.+++++++||+++ +.| +++|++|..|+++.+.... ...++.++|
T Consensus 14 ~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~--~~~---~~vGivt~~dl~~~~~~~~---------~~~~v~~~m---- 75 (127)
T 3nqr_A 14 QMITLKRNQTLDECLDVIIESAHSRFPVISE--DKD---HIEGILMAKDLLPFMRSDA---------EAFSMDKVL---- 75 (127)
T ss_dssp GCCCEETTCCHHHHHHHHHHHCCSEEEEESS--STT---CEEEEEEGGGGGGGGSTTC---------CCCCHHHHC----
T ss_pred HeEEEcCCCCHHHHHHHHHhCCCCEEEEEcC--CCC---cEEEEEEHHHHHHHHhccC---------CCCCHHHHc----
Confidence 4788999999999999999999999999952 225 6999999999988654221 133444444
Q ss_pred ccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHH
Q 014342 340 VPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 397 (426)
Q Consensus 340 ~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~ 397 (426)
+++.++.+++++.+|+++|.+++++.+||+|++|+++|+||++||++.+
T Consensus 76 ---------~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 76 ---------RTAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELI 124 (127)
T ss_dssp ---------BCCCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC
T ss_pred ---------CCCeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 2466899999999999999999999999999999999999999999754
No 30
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.65 E-value=1.3e-15 Score=134.95 Aligned_cols=117 Identities=10% Similarity=0.082 Sum_probs=99.2
Q ss_pred CC--CCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccc
Q 014342 257 CP--RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSI 334 (426)
Q Consensus 257 ~~--~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l 334 (426)
|+ .+++++.+++++.+|++.|.+++++++||+++ +.+ +++|+||..|+++.+.... ..++.++
T Consensus 48 M~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~--~~~---~lvGivt~~dl~~~~~~~~----------~~~v~~i 112 (172)
T 3lhh_A 48 MVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRN--NVD---DMVGIISAKQLLSESIAGE----------RLELVDL 112 (172)
T ss_dssp SEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESS--STT---SEEEEEEHHHHHHHHHTTC----------CCCGGGG
T ss_pred CccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeC--CCC---eEEEEEEHHHHHHHHhhcC----------cccHHHH
Confidence 55 67789999999999999999999999999952 225 6999999999999875431 2344544
Q ss_pred cccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhccc
Q 014342 335 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKA 401 (426)
Q Consensus 335 ~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~~~ 401 (426)
| ++++++.+++++.+|+++|.+++++.+||+|++|+++|+||+.||++.+....
T Consensus 113 m-------------~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~l~~~~ 166 (172)
T 3lhh_A 113 V-------------KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDALTGEF 166 (172)
T ss_dssp C-------------BCCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHTTC
T ss_pred h-------------cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHHHhCCC
Confidence 4 37789999999999999999999999999999999999999999999876544
No 31
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.65 E-value=7.7e-16 Score=128.18 Aligned_cols=118 Identities=18% Similarity=0.231 Sum_probs=97.7
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccc
Q 014342 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 336 (426)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i 336 (426)
|.++++++.+++++.+|++.|.+++.+++||+| +| +++|++|..|+++++..... ....++.+++.
T Consensus 7 m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~---~~~G~it~~dl~~~~~~~~~-------~~~~~v~~~m~ 72 (125)
T 1pbj_A 7 MVTDVDTIDITASLEDVLRNYVENAKGSSVVVK----EG---VRVGIVTTWDVLEAIAEGDD-------LAEVKVWEVME 72 (125)
T ss_dssp CBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE----TT---EEEEEEEHHHHHHHHHHTCC-------TTTSBHHHHCB
T ss_pred cCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe----CC---eeEEEEeHHHHHHHHhcCCc-------ccccCHHHHcC
Confidence 466788999999999999999999999999995 35 79999999999988765321 12344555442
Q ss_pred cccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhccc
Q 014342 337 GTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKA 401 (426)
Q Consensus 337 ~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~~~ 401 (426)
+++.++.+++++.+|+++|.+++++++||+|+ |+++|+||++||++.+..+.
T Consensus 73 ------------~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~~~~ 124 (125)
T 1pbj_A 73 ------------RDLVTISPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKMAKR 124 (125)
T ss_dssp ------------CGGGEECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC---
T ss_pred ------------CCCeEECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHHhcc
Confidence 46779999999999999999999999999998 99999999999999876543
No 32
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.65 E-value=5.5e-16 Score=134.44 Aligned_cols=116 Identities=12% Similarity=0.146 Sum_probs=96.8
Q ss_pred CceEeCCCCCHHHHHHHHHhCCCCeeEEE-ecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccccc
Q 014342 260 PLVQAGPYDSLKEVALKILQNKVATVPII-HSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 338 (426)
Q Consensus 260 ~~v~v~~~~sl~~a~~~m~~~~v~~lpVv-d~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i~~ 338 (426)
+++++.+++++.+|++.|.+++++++||+ ++ +.| +++|+||..|+++++.... ..++.++|
T Consensus 31 ~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~--~~~---~lvGivt~~dl~~~~~~~~----------~~~v~~~m--- 92 (153)
T 3oco_A 31 SMSVVDVDETIADALLLYLEEQYSRFPVTADN--DKD---KIIGYAYNYDIVRQARIDD----------KAKISTIM--- 92 (153)
T ss_dssp GCCCEETTSBHHHHHHHHHHHCCSEEEEEETT--EEE---EEEEEEEHHHHHHHHHHHT----------TSBGGGTC---
T ss_pred heEEEcCCCCHHHHHHHHHhCCCCEEEEEECC--CCC---cEEEEEEHHHHHhHHhcCC----------CCcHHHHh---
Confidence 67889999999999999999999999999 42 235 7999999999999876431 23444443
Q ss_pred cccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhccccc
Q 014342 339 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYA 403 (426)
Q Consensus 339 ~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~~~~~ 403 (426)
++++++.+++++.+|+++|.+++++.+||+|++|+++|+||+.||++.+......
T Consensus 93 ----------~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~~~~d 147 (153)
T 3oco_A 93 ----------RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFGNLRD 147 (153)
T ss_dssp ----------BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC----
T ss_pred ----------CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhccCCC
Confidence 3778999999999999999999999999999999999999999999987765443
No 33
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.65 E-value=1.1e-15 Score=128.87 Aligned_cols=117 Identities=21% Similarity=0.333 Sum_probs=99.2
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccc
Q 014342 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 336 (426)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i 336 (426)
|.++++++.+++++.+|++.|.+++++++||+| +| +++|++|..|+++++..... ...++.+++.
T Consensus 10 m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~---~~~Givt~~dl~~~~~~~~~--------~~~~v~~~~~ 74 (133)
T 2ef7_A 10 MKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD----GN---KPVGIITERDIVKAIGKGKS--------LETKAEEFMT 74 (133)
T ss_dssp SBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE----TT---EEEEEEEHHHHHHHHHTTCC--------TTCBGGGTSE
T ss_pred ccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE----CC---EEEEEEcHHHHHHHHhcCCC--------cccCHHHHcC
Confidence 567788999999999999999999999999995 35 79999999999988764321 1344555442
Q ss_pred cccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhcc
Q 014342 337 GTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDK 400 (426)
Q Consensus 337 ~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~~ 400 (426)
+++.++.+++++.+|+++|.+++++++||+|++|+++|+||+.||++.+.+.
T Consensus 75 ------------~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~ 126 (133)
T 2ef7_A 75 ------------ASLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDDM 126 (133)
T ss_dssp ------------ECCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHH
T ss_pred ------------CCCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHH
Confidence 3677899999999999999999999999999899999999999999877654
No 34
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.64 E-value=1.7e-15 Score=130.39 Aligned_cols=126 Identities=13% Similarity=0.184 Sum_probs=105.3
Q ss_pred hccccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhcc
Q 014342 152 LSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELET 231 (426)
Q Consensus 152 l~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~ 231 (426)
|...++.|+|.....+++++++.|+.+|++.|.++++.++||+|++.++++|+||..|++..+.... .
T Consensus 20 l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~------------~ 87 (148)
T 3lv9_A 20 FEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINEN------------K 87 (148)
T ss_dssp GGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS------------C
T ss_pred cCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCC------------C
Confidence 5688999999876678899999999999999999999999999964379999999999987654321 0
Q ss_pred cchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHH
Q 014342 232 HTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILK 311 (426)
Q Consensus 232 ~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~ 311 (426)
.++.. .| ++++++.+++++.+|++.|.+++++++||+| +.| +++|+||..||++
T Consensus 88 ~~v~~-------------------~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd---~~g---~~~Giit~~dil~ 141 (148)
T 3lv9_A 88 IELEE-------------------IL-RDIIYISENLTIDKALERIRKEKLQLAIVVD---EYG---GTSGVVTIEDILE 141 (148)
T ss_dssp CCGGG-------------------TC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEEC---TTS---SEEEEEEHHHHHH
T ss_pred ccHHH-------------------hc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEe---CCC---CEEEEEEHHHHHH
Confidence 01111 25 6778999999999999999999999999995 345 6999999999999
Q ss_pred HHHh
Q 014342 312 CICR 315 (426)
Q Consensus 312 ~l~~ 315 (426)
.+..
T Consensus 142 ~l~~ 145 (148)
T 3lv9_A 142 EIVG 145 (148)
T ss_dssp HHHH
T ss_pred HHhC
Confidence 8764
No 35
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.64 E-value=5e-16 Score=131.11 Aligned_cols=126 Identities=16% Similarity=0.197 Sum_probs=100.5
Q ss_pred ccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhcccch
Q 014342 155 HTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTI 234 (426)
Q Consensus 155 ~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i 234 (426)
.++.|+|.....+++++++.|+.+|++.|.++++.++||+|.+.++++|+||..|++..+.. . ... ...++
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~---~-~~~-----~~~~v 72 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTE---K-KEF-----TKEIM 72 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTS---S-SCC-----CHHHH
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhc---c-Ccc-----chhhH
Confidence 46788897666789999999999999999999999999997555799999999998876531 1 001 01111
Q ss_pred hhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHH
Q 014342 235 SAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCIC 314 (426)
Q Consensus 235 ~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~ 314 (426)
.. .| ++++++.+++++.+|++.|.+++++++||+| ++| +++|++|..||++.+.
T Consensus 73 ~~-------------------~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd---~~g---~lvGiit~~Dil~~l~ 126 (130)
T 3hf7_A 73 LR-------------------AA-DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVD---EYG---DIQGLVTVEDILEEIV 126 (130)
T ss_dssp HH-------------------HS-BCCCEEETTCBHHHHHHHHHHHCCCEEEEEC---TTS---CEEEEEEHHHHHHHHH
T ss_pred HH-------------------hc-cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEc---CCC---CEEEEeeHHHHHHHHh
Confidence 11 13 4567899999999999999999999999995 345 6999999999999876
Q ss_pred h
Q 014342 315 R 315 (426)
Q Consensus 315 ~ 315 (426)
.
T Consensus 127 g 127 (130)
T 3hf7_A 127 G 127 (130)
T ss_dssp C
T ss_pred C
Confidence 3
No 36
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.63 E-value=2.4e-15 Score=132.10 Aligned_cols=117 Identities=20% Similarity=0.284 Sum_probs=98.7
Q ss_pred CCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccccc
Q 014342 259 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 338 (426)
Q Consensus 259 ~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i~~ 338 (426)
.+++++.+++++.+|++.|.+++++++||+| ++| +++|+||..||++++...... ....++.++|.
T Consensus 35 ~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd---~~~---~~~Givt~~dl~~~~~~~~~~------~~~~~v~~~m~-- 100 (165)
T 3fhm_A 35 RDVVTVGPDVSIGEAAGTLHAHKIGAVVVTD---ADG---VVLGIFTERDLVKAVAGQGAA------SLQQSVSVAMT-- 100 (165)
T ss_dssp SCCCEECTTSBHHHHHHHHHHHTCSEEEEEC---TTS---CEEEEEEHHHHHHHHHHHGGG------GGTSBGGGTSB--
T ss_pred CCCeEECCCCCHHHHHHHHHHcCCCEEEEEc---CCC---eEEEEEEHHHHHHHHHhcCCc------cccCCHHHHhc--
Confidence 3678999999999999999999999999995 235 699999999999988764211 12345555542
Q ss_pred cccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhcc
Q 014342 339 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDK 400 (426)
Q Consensus 339 ~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~~ 400 (426)
++++++.+++++.+|+++|.+++++++||+|+ |+++|+||+.||++.+...
T Consensus 101 ----------~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~~ 151 (165)
T 3fhm_A 101 ----------KNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARIGE 151 (165)
T ss_dssp ----------SSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTCC
T ss_pred ----------CCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHH
Confidence 47788999999999999999999999999998 9999999999999977654
No 37
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.63 E-value=1.9e-15 Score=128.99 Aligned_cols=116 Identities=20% Similarity=0.326 Sum_probs=96.6
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCC-CCcceEEEEecHHhHHHHHHhhccccCCCcccccccccccc
Q 014342 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPA-GSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (426)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~-g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (426)
|.++++++.+++++.+|++.|.+++++++||+|+ +. . +++|++|..|+++++..... ...++.++|
T Consensus 11 m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~--~~~~---~~~Givt~~dl~~~~~~~~~--------~~~~v~~~m 77 (141)
T 2rih_A 11 LKRPPVSLPETATIREVATELAKNRVGLAVLTAR--DNPK---RPVAVVSERDILRAVAQRLD--------LDGPAMPIA 77 (141)
T ss_dssp CCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEET--TEEE---EEEEEEEHHHHHHHHHTTCC--------TTSBSGGGC
T ss_pred hcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcC--CCcc---eeEEEEEHHHHHHHHhcCCC--------CCCCHHHHc
Confidence 5678899999999999999999999999999963 21 1 49999999999998764311 134455544
Q ss_pred ccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHh
Q 014342 336 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (426)
Q Consensus 336 i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~ 398 (426)
.++++++.++ ++.+|+++|.+++++++||+|++|+++|+||++||++.+.
T Consensus 78 ------------~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 127 (141)
T 2rih_A 78 ------------NSPITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFERA 127 (141)
T ss_dssp ------------BCCCEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCHH
T ss_pred ------------CCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHHH
Confidence 2578899999 9999999999999999999998999999999999986443
No 38
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.63 E-value=3.9e-15 Score=132.21 Aligned_cols=126 Identities=13% Similarity=0.124 Sum_probs=105.2
Q ss_pred hccccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhcc
Q 014342 152 LSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELET 231 (426)
Q Consensus 152 l~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~ 231 (426)
|...++.|+|.....+++++++.|+.+|++.|.++++.++||+|.+.++++|+||..|++..+.... .
T Consensus 33 l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~~------------~ 100 (173)
T 3ocm_A 33 LAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITEG------------R 100 (173)
T ss_dssp HTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS------------S
T ss_pred cCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcCC------------c
Confidence 5788999999876688999999999999999999999999999865479999999999987654211 0
Q ss_pred cchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHH
Q 014342 232 HTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILK 311 (426)
Q Consensus 232 ~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~ 311 (426)
.++. |.++++++.+++++.+|+..|.+++++.+||+| +.| +++||||..||++
T Consensus 101 ~~v~---------------------~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvd---e~g---~lvGiIT~~Dil~ 153 (173)
T 3ocm_A 101 VRRN---------------------RLRDPIIVHESIGILRLMDTLKRSRGQLVLVAD---EFG---AIEGLVTPIDVFE 153 (173)
T ss_dssp CCGG---------------------GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEEC---TTC---CEEEEECHHHHHH
T ss_pred chhH---------------------hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEe---CCC---CEEEEEeHHHHHH
Confidence 0111 125678999999999999999999999999995 345 7999999999999
Q ss_pred HHHhh
Q 014342 312 CICRH 316 (426)
Q Consensus 312 ~l~~~ 316 (426)
.+...
T Consensus 154 ~l~~~ 158 (173)
T 3ocm_A 154 AIAGE 158 (173)
T ss_dssp HHHCC
T ss_pred HHhCc
Confidence 98754
No 39
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.62 E-value=2.3e-15 Score=128.33 Aligned_cols=125 Identities=18% Similarity=0.165 Sum_probs=97.1
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccc
Q 014342 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 336 (426)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i 336 (426)
|.++++++.+++++.+|++.|.+++++++||+|+ +| +++|++|..|+++++..... .....++.++|.
T Consensus 17 ~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~------~~~~~~v~~~m~ 84 (144)
T 2nyc_A 17 TQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDE---NG---YLINVYEAYDVLGLIKGGIY------NDLSLSVGEALM 84 (144)
T ss_dssp BCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECT---TC---BEEEEEEHHHHHHHHHTC----------CCSBHHHHHH
T ss_pred CCCCceEECCCCcHHHHHHHHHHcCcceeeEEcC---CC---cEEEEEcHHHHHHHhccccc------ccCCccHHHHHh
Confidence 5678889999999999999999999999999952 35 79999999999988754210 112345555442
Q ss_pred cccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhc
Q 014342 337 GTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (426)
Q Consensus 337 ~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~ 399 (426)
.... ..++++++.+++++.+|+++|.+++++++||+|++|+++|+||++||++.+..
T Consensus 85 ~~~~------~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~ 141 (144)
T 2nyc_A 85 RRSD------DFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILL 141 (144)
T ss_dssp HCC------------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred cCcc------ccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 1100 00157799999999999999999999999999988999999999999987654
No 40
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.62 E-value=3.5e-15 Score=132.53 Aligned_cols=118 Identities=7% Similarity=0.062 Sum_probs=98.7
Q ss_pred CCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccccc
Q 014342 259 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 338 (426)
Q Consensus 259 ~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i~~ 338 (426)
.+++++.+++++.+|++.|.+++++++||+++ ..+ +++|+||.+||++++.... ..++. +
T Consensus 46 ~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~--~~~---~lvGivt~~Dl~~~~~~~~----------~~~v~-~---- 105 (173)
T 3ocm_A 46 TDVSWVNIDDDAATIRQQLTAAPHSFFPVCRG--SLD---EVVGIGRAKDLVADLITEG----------RVRRN-R---- 105 (173)
T ss_dssp GGCCCEETTSCHHHHHHHHHHSSCSEEEEESS--STT---SEEEEEEHHHHHHHHHHHS----------SCCGG-G----
T ss_pred HHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeC--CCC---CEEEEEEHHHHHHHHhcCC----------cchhH-h----
Confidence 45788999999999999999999999999952 225 6999999999999876431 12233 1
Q ss_pred cccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhccccccC
Q 014342 339 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQI 405 (426)
Q Consensus 339 ~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~~~~~~l 405 (426)
+ ++++++.+++++.+|+++|.+++++.+||+|++|+++|+||+.||+..+....+...
T Consensus 106 -~--------~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~~i~de~ 163 (173)
T 3ocm_A 106 -L--------RDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEFPDED 163 (173)
T ss_dssp -S--------BCCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHCCCCCTT
T ss_pred -c--------CCCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhCcCCCcc
Confidence 1 377899999999999999999999999999999999999999999998877655443
No 41
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.62 E-value=2.6e-15 Score=129.35 Aligned_cols=121 Identities=17% Similarity=0.231 Sum_probs=96.7
Q ss_pred CCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccccc
Q 014342 259 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 338 (426)
Q Consensus 259 ~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i~~ 338 (426)
.+++++.+++++.+|++.|.+++++++||+| ++| +++|+||..||++++....... .......++.++|
T Consensus 25 ~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd---~~~---~~~Givt~~dl~~~~~~~~~~~--~~~~~~~~v~~~m--- 93 (150)
T 3lqn_A 25 EKVAHVQIGNGLEHALLVLVKSGYSAIPVLD---PMY---KLHGLISTAMILDGILGLERIE--FERLEEMKVEQVM--- 93 (150)
T ss_dssp GGSCCBCTTSBHHHHHHHHHHHTCSEEEEEC---TTC---BEEEEEEHHHHHHHTBCSSSBC--GGGGGGCBGGGTC---
T ss_pred CceEEECCCCcHHHHHHHHHHcCCcEEEEEC---CCC---CEEEEEEHHHHHHHHHhhcccc--hhHHhcCCHHHHh---
Confidence 4578999999999999999999999999995 245 7999999999998865321100 0011234444443
Q ss_pred cccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhccc
Q 014342 339 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKA 401 (426)
Q Consensus 339 ~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~~~ 401 (426)
.++++++.+++++.+|+++|.++++ +||||++|+++|+||++||++.+.+..
T Consensus 94 ---------~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~~~ 145 (150)
T 3lqn_A 94 ---------KQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNKKV 145 (150)
T ss_dssp ---------BSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC
T ss_pred ---------cCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHHHh
Confidence 2577899999999999999999997 999999999999999999999877643
No 42
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.62 E-value=2.3e-15 Score=138.19 Aligned_cols=163 Identities=12% Similarity=0.194 Sum_probs=97.1
Q ss_pred cccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhcccc
Q 014342 154 THTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHT 233 (426)
Q Consensus 154 ~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~ 233 (426)
.-+|.+.|.. .+++++++.|+.+|+++|.+++++++||+|+ +++++|+||..|+...+. ..+
T Consensus 12 ~~~~~~~~~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~-~~~l~Givt~~dl~~~~~---------------~~~ 73 (213)
T 1vr9_A 12 HMKVKKWVTQ--DFPMVEESATVRECLHRMRQYQTNECIVKDR-EGHFRGVVNKEDLLDLDL---------------DSS 73 (213)
T ss_dssp -CBGGGGCBS--CSCEEETTCBHHHHHHHHHHTTSSEEEEECT-TSBEEEEEEGGGGTTSCT---------------TSB
T ss_pred ccCHHHhhcC--CCeEECCCCcHHHHHHHHHHCCCCEEEEEcC-CCEEEEEEEHHHHHhhcC---------------CCc
Confidence 4567788866 5678899999999999999999999999985 479999999999753210 001
Q ss_pred hhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHH
Q 014342 234 ISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCI 313 (426)
Q Consensus 234 i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l 313 (426)
++. .|.++++++.+++++.+|+++|.+++++++||+| ++| +++|+||.+|+++.+
T Consensus 74 v~~-------------------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd---~~g---~lvGiit~~Dil~~~ 128 (213)
T 1vr9_A 74 VFN-------------------KVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVD---EEM---RLKGAVSLHDFLEAL 128 (213)
T ss_dssp SGG-------------------GCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEEC---TTC---BEEEEEEHHHHHHHH
T ss_pred HHH-------------------HccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEc---CCC---EEEEEEEHHHHHHHH
Confidence 111 2466788999999999999999999999999995 235 799999999999987
Q ss_pred HhhccccCCCccccccccccccccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCC
Q 014342 314 CRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDND 382 (426)
Q Consensus 314 ~~~~~~~~~~~~~~~~~v~~l~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g 382 (426)
...... .+.+ +.. .+.+.....++.+|.++|.+++++.+||++.+|
T Consensus 129 ~~~~~~------------~~~~--~~l---------~~~~~~~~~~l~~~~~~l~~~~~~~l~V~~~~~ 174 (213)
T 1vr9_A 129 IEALAM------------DVPG--IRF---------SVLLEDKPGELRKVVDALALSNINILSVITTRS 174 (213)
T ss_dssp HHSCC----------------------------------------------------------------
T ss_pred HHHhcC------------CCCc--EEE---------EEEeCCCCccHHHHHHHHHHCCCcEEEEEEEec
Confidence 643210 0000 100 111113334599999999999999999987544
No 43
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.62 E-value=2.4e-15 Score=131.25 Aligned_cols=119 Identities=14% Similarity=0.237 Sum_probs=97.7
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccc
Q 014342 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 336 (426)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i 336 (426)
|.++ +++.+++++.+|++.|.+++++++||+| ++| +++|+||..||++++.... .....++.++|.
T Consensus 23 m~~~-~~v~~~~~~~~a~~~m~~~~~~~~~Vvd---~~~---~~~Givt~~dl~~~~~~~~-------~~~~~~v~~~m~ 88 (159)
T 3fv6_A 23 QSIP-VVIHENVSVYDAICTMFLEDVGTLFVVD---RDA---VLVGVLSRKDLLRASIGQQ-------ELTSVPVHIIMT 88 (159)
T ss_dssp CBCC-CEEETTSBHHHHHHHHHHHTCSEEEEEC---TTS---CEEEEEEHHHHHHHHTSCS-------CTTTCBGGGTSE
T ss_pred cCCC-EEECCCCcHHHHHHHHHHCCCCEEEEEc---CCC---cEEEEEeHHHHHHHhhccC-------cccCcCHHHHHc
Confidence 4554 5899999999999999999999999995 235 6999999999999774321 122445665552
Q ss_pred cccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCC---cEEEEEeHHHHHHHHhc
Q 014342 337 GTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDND---SLLDIYSRSDITALAKD 399 (426)
Q Consensus 337 ~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g---~lvGiis~~DI~~~~~~ 399 (426)
.. .+++++.+++++.+|+++|.+++++++||+|++| +++|+||+.||++.+.+
T Consensus 89 ~~----------~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~ 144 (159)
T 3fv6_A 89 RM----------PNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVS 144 (159)
T ss_dssp ET----------TSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHH
T ss_pred CC----------CCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHH
Confidence 10 1677899999999999999999999999999888 99999999999997765
No 44
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.61 E-value=3.3e-15 Score=132.32 Aligned_cols=128 Identities=15% Similarity=0.160 Sum_probs=102.9
Q ss_pred HhccccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhc
Q 014342 151 FLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELE 230 (426)
Q Consensus 151 ~l~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~ 230 (426)
.|...++.|+|....++++++++.|+.+|+++|.++++.++||+|.+.++++|+||..|++..+....
T Consensus 38 ~l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~------------ 105 (172)
T 3lhh_A 38 RLDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAGE------------ 105 (172)
T ss_dssp -----CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTTC------------
T ss_pred ccCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhcC------------
Confidence 36678999999866688999999999999999999999999999864379999999999987654210
Q ss_pred ccchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHH
Q 014342 231 THTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDIL 310 (426)
Q Consensus 231 ~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil 310 (426)
..++.. .| ++++++.+++++.+|+..|.+++++++||+| +.| +++|+||..||+
T Consensus 106 ~~~v~~-------------------im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd---~~g---~lvGiit~~Dil 159 (172)
T 3lhh_A 106 RLELVD-------------------LV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVD---EYG---DLKGLVTLQDMM 159 (172)
T ss_dssp CCCGGG-------------------GC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEEC---TTS---CEEEEEEHHHHH
T ss_pred cccHHH-------------------Hh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEe---CCC---CEEEEeeHHHHH
Confidence 011111 25 6788999999999999999999999999995 335 699999999999
Q ss_pred HHHHhh
Q 014342 311 KCICRH 316 (426)
Q Consensus 311 ~~l~~~ 316 (426)
+.+...
T Consensus 160 ~~l~~~ 165 (172)
T 3lhh_A 160 DALTGE 165 (172)
T ss_dssp HHHHTT
T ss_pred HHHhCC
Confidence 998754
No 45
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.61 E-value=3.4e-15 Score=130.48 Aligned_cols=124 Identities=18% Similarity=0.278 Sum_probs=98.3
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCC-Ccccccccccccc
Q 014342 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSS-SLPILQQPVSSIQ 335 (426)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~-~~~~~~~~v~~l~ 335 (426)
|.++++++.+++++.+|+..|.+++++++||+| ++| +++|+||..||++++......... .......++.++|
T Consensus 11 m~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd---~~~---~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v~~im 84 (160)
T 2o16_A 11 MTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVD---ANK---KLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPLFEVM 84 (160)
T ss_dssp SEESCCCBCTTSBHHHHHHHHHHHTCSEEEEEC---TTC---BEEEEEEHHHHHHHHHHHCC---------CCCBHHHHS
T ss_pred hcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEc---CCC---cEEEEEeHHHHHHHHHHhhcccccccchhcccCHHHHh
Confidence 566788999999999999999999999999995 235 799999999999987653221100 0011233444443
Q ss_pred ccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhc
Q 014342 336 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (426)
Q Consensus 336 i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~ 399 (426)
.++++++.+++++.+|+++|.+++++++||+|+ |+++|+||++||++.+..
T Consensus 85 ------------~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~~~~ 135 (160)
T 2o16_A 85 ------------HTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTIAIN 135 (160)
T ss_dssp ------------CSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHHHHH
T ss_pred ------------cCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 357889999999999999999999999999998 999999999999987654
No 46
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.61 E-value=2.5e-15 Score=127.37 Aligned_cols=117 Identities=20% Similarity=0.383 Sum_probs=96.5
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhH-HHHHHhhccccCCCcccccccccccc
Q 014342 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDI-LKCICRHFKHSSSSLPILQQPVSSIQ 335 (426)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~di-l~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (426)
|.++++++.+++++.+|++.|.+++.+++||+|+ +| +++|++|..|+ ++++.... ....++.++|
T Consensus 14 m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~--------~~~~~v~~~m 79 (138)
T 2p9m_A 14 MTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDD---EN---KVIGIVTTTDIGYNLIRDKY--------TLETTIGDVM 79 (138)
T ss_dssp SBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECT---TC---BEEEEEEHHHHHHHHTTTCC--------CSSCBHHHHS
T ss_pred hcCCceEECCCCcHHHHHHHHHHCCCcEEEEECC---CC---eEEEEEEHHHHHHHHHhhcc--------cCCcCHHHHh
Confidence 5677888999999999999999999999999952 35 79999999999 87654221 1234455544
Q ss_pred ccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcC-----CcEeeEEcCCCcEEEEEeHHHHHHHHhc
Q 014342 336 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQAD-----VSSIPIVDDNDSLLDIYSRSDITALAKD 399 (426)
Q Consensus 336 i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~-----i~~lPVVd~~g~lvGiis~~DI~~~~~~ 399 (426)
. +++.++.+++++.+|+++|.+++ ++++||+|++|+++|+||++||++.+.+
T Consensus 80 ~------------~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 80 T------------KDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTISK 136 (138)
T ss_dssp C------------SSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred C------------CCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 2 46778999999999999999999 9999999988999999999999987654
No 47
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.61 E-value=5.2e-15 Score=125.54 Aligned_cols=120 Identities=18% Similarity=0.330 Sum_probs=97.9
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccc
Q 014342 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 336 (426)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i 336 (426)
|.++++++.+++++.+|++.|.+++++++||+|+ +| +++|++|..|+++.+.... .....++.++|
T Consensus 13 m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~-------~~~~~~v~~~m- 78 (138)
T 2yzi_A 13 MTKKLLGVKPSTSVQEASRLMMEFDVGSLVVIND---DG---NVVGFFTKSDIIRRVIVPG-------LPYDIPVERIM- 78 (138)
T ss_dssp CBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECT---TS---CEEEEEEHHHHHHHTTTTC-------CCTTSBGGGTC-
T ss_pred hcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---cEEEEEeHHHHHHHHHhcC-------CcccCCHHHHh-
Confidence 5678899999999999999999999999999952 35 7999999999985332110 01234444444
Q ss_pred cccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhcccc
Q 014342 337 GTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAY 402 (426)
Q Consensus 337 ~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~~~~ 402 (426)
.+++.++.+++++.+|+++|.+++++++ |+|++|+++|+||+.||++.+.....
T Consensus 79 -----------~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~~~~ 132 (138)
T 2yzi_A 79 -----------TRNLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRRRLE 132 (138)
T ss_dssp -----------BCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHCCSC
T ss_pred -----------hCCCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHHHHH
Confidence 2477899999999999999999999999 99988999999999999998876543
No 48
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.60 E-value=6.1e-15 Score=128.30 Aligned_cols=125 Identities=16% Similarity=0.232 Sum_probs=98.0
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCCCe-eEEEecCCCCCCcceEEEEecHHhHHHHHHhhc----cccC---C-Cccc
Q 014342 256 PCPRPLVQAGPYDSLKEVALKILQNKVAT-VPIIHSTGPAGSCQEILYLASLSDILKCICRHF----KHSS---S-SLPI 326 (426)
Q Consensus 256 ~~~~~~v~v~~~~sl~~a~~~m~~~~v~~-lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~----~~~~---~-~~~~ 326 (426)
.|.++++++.+++++.+|++.|.++++++ +||+|+ + +++|+||..||++++...+ .... . ....
T Consensus 21 im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~----~---~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (157)
T 1o50_A 21 LISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARD----N---KLVGMIPVMHLLKVSGFHFFGFIPKEELIRSSMKRL 93 (157)
T ss_dssp SSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEET----T---EEEEEEEHHHHHHHHHHHHHCCCC-------CCCCC
T ss_pred cccCCCceECCCCCHHHHHHHHHhCCCCccEEEEEC----C---EEEEEEEHHHHHHHHhhhHHhhhccHHHHHHHHHHH
Confidence 36788999999999999999999999999 999962 2 4999999999998765210 0000 0 0011
Q ss_pred cccccccccccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhcc
Q 014342 327 LQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDK 400 (426)
Q Consensus 327 ~~~~v~~l~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~~ 400 (426)
...++.++| .+ ++++.+++++.+|+++|.+++++++||+|++|+++|+||+.||++.+.+.
T Consensus 94 ~~~~v~~im------------~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~~~ 154 (157)
T 1o50_A 94 IAKNASEIM------------LD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALWKG 154 (157)
T ss_dssp SSCBHHHHC------------BC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHS
T ss_pred cCCcHHHHc------------CC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHHHh
Confidence 223344333 24 77899999999999999999999999999889999999999999977653
No 49
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.60 E-value=9e-16 Score=128.74 Aligned_cols=124 Identities=17% Similarity=0.278 Sum_probs=97.6
Q ss_pred cccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhcccc
Q 014342 154 THTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHT 233 (426)
Q Consensus 154 ~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~ 233 (426)
+.++.|+|.....+++++++.|+.+|+++|.++++.++||+|++.++++|+||..|++..+.. .. ...+
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~---~~--------~~~~ 70 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRS---DA--------EAFS 70 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGST---TC--------CCCC
T ss_pred CcCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhc---cC--------CCCC
Confidence 457788887655788999999999999999999999999999654799999999998754321 00 0111
Q ss_pred hhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHH
Q 014342 234 ISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCI 313 (426)
Q Consensus 234 i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l 313 (426)
++.+ |. +++++.+++++.+|++.|.+++++++||+| ++| +++|+||..||++.+
T Consensus 71 v~~~-------------------m~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd---~~g---~~~Giit~~dll~~l 124 (127)
T 3nqr_A 71 MDKV-------------------LR-TAVVVPESKRVDRMLKEFRSQRYHMAIVID---EFG---GVSGLVTIEDILELI 124 (127)
T ss_dssp HHHH-------------------CB-CCCEEETTCBHHHHHHHHHHTTCCEEEEEC---TTS---CEEEEEEHHHHHHHC
T ss_pred HHHH-------------------cC-CCeEECCCCcHHHHHHHHHhcCCeEEEEEe---CCC---CEEEEEEHHHHHHHH
Confidence 2221 33 357899999999999999999999999995 345 799999999999875
Q ss_pred H
Q 014342 314 C 314 (426)
Q Consensus 314 ~ 314 (426)
.
T Consensus 125 ~ 125 (127)
T 3nqr_A 125 V 125 (127)
T ss_dssp -
T ss_pred h
Confidence 4
No 50
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.60 E-value=7.3e-15 Score=127.11 Aligned_cols=122 Identities=18% Similarity=0.187 Sum_probs=97.1
Q ss_pred CCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccccc
Q 014342 259 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 338 (426)
Q Consensus 259 ~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i~~ 338 (426)
++++++.+++++.+|++.|.+++++++||+|+ +| +++|++|..|+++++..... .....++.+++...
T Consensus 29 ~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~---~~---~~vGivt~~dl~~~~~~~~~------~~~~~~v~~~m~~~ 96 (152)
T 2uv4_A 29 ANIAMVRTTTPVYVALGIFVQHRVSALPVVDE---KG---RVVDIYSKFDVINLAAEKTY------NNLDVSVTKALQHR 96 (152)
T ss_dssp SSCCCEETTCBHHHHHHHHHHHCCSEEEEECT---TS---BEEEEEEHHHHHHHHHCSSC------CCTTSBGGGGGGTC
T ss_pred CCceEeCCCCcHHHHHHHHHHcCCceEeEECC---CC---cEEEEEeHHHHHHHhcchhh------hhhcchHHHHHhhh
Confidence 56788999999999999999999999999952 35 79999999999987754311 11234455554200
Q ss_pred cccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHh
Q 014342 339 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (426)
Q Consensus 339 ~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~ 398 (426)
..+.++++++.+++++.+|+++|.+++++++||+|++|+++|+||++||++.+.
T Consensus 97 ------~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l~ 150 (152)
T 2uv4_A 97 ------SHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALV 150 (152)
T ss_dssp ------CHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHC
T ss_pred ------hcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 000137789999999999999999999999999999899999999999998764
No 51
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.60 E-value=7.4e-15 Score=128.13 Aligned_cols=140 Identities=16% Similarity=0.228 Sum_probs=109.2
Q ss_pred HHHHHHHhccccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCC
Q 014342 145 RDRISSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNL 224 (426)
Q Consensus 145 ~~~~~~~l~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~ 224 (426)
+..+.+.|...++.|+|.. .+++.++.++.+|+++|.++++..+||+|+ +++++|+||..|++..+.. ..
T Consensus 7 ~~~l~~~l~~~~v~~im~~---~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~---~~--- 76 (159)
T 3fv6_A 7 TQLLADKLKKLQVKDFQSI---PVVIHENVSVYDAICTMFLEDVGTLFVVDR-DAVLVGVLSRKDLLRASIG---QQ--- 76 (159)
T ss_dssp CHHHHHHHTTCBGGGSCBC---CCEEETTSBHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHTS---CS---
T ss_pred HHHHHHHHhhCCHHHHcCC---CEEECCCCcHHHHHHHHHHCCCCEEEEEcC-CCcEEEEEeHHHHHHHhhc---cC---
Confidence 3467889999999999974 358999999999999999999999999995 4799999999998876521 10
Q ss_pred ChhhhcccchhhhHHHHHhhccccccCCCCCCCCC--CceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEE
Q 014342 225 TEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILY 302 (426)
Q Consensus 225 ~~~~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~--~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvG 302 (426)
.....++.. .|.+ +++++.+++++.+|++.|.+++++++||+|++.+.. +++|
T Consensus 77 ---~~~~~~v~~-------------------~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~---~~vG 131 (159)
T 3fv6_A 77 ---ELTSVPVHI-------------------IMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGF---EVIG 131 (159)
T ss_dssp ---CTTTCBGGG-------------------TSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSE---EEEE
T ss_pred ---cccCcCHHH-------------------HHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcce---eEEE
Confidence 001111222 1344 778899999999999999999999999997421111 4999
Q ss_pred EecHHhHHHHHHhhccc
Q 014342 303 LASLSDILKCICRHFKH 319 (426)
Q Consensus 303 iit~~dil~~l~~~~~~ 319 (426)
+||..||++++.+....
T Consensus 132 iit~~dil~~l~~~~~~ 148 (159)
T 3fv6_A 132 RVTKTNMTKILVSLSEN 148 (159)
T ss_dssp EEEHHHHHHHHHHHHTT
T ss_pred EEEHHHHHHHHHHHhhc
Confidence 99999999998876443
No 52
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.60 E-value=5.6e-15 Score=124.92 Aligned_cols=116 Identities=18% Similarity=0.303 Sum_probs=95.4
Q ss_pred CCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccccc
Q 014342 259 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 338 (426)
Q Consensus 259 ~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i~~ 338 (426)
++++++.+++++.+|++.|.+++++++||++ +| +++|++|..|+++.+..... .....++.++|.
T Consensus 17 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd----~~---~~~Givt~~dl~~~~~~~~~------~~~~~~v~~~m~-- 81 (135)
T 2rc3_A 17 HTVVAIGPDDSVFNAMQKMAADNIGALLVMK----DE---KLVGILTERDFSRKSYLLDK------PVKDTQVKEIMT-- 81 (135)
T ss_dssp CCCCEECTTSBHHHHHHHHHHHTCSEEEEEE----TT---EEEEEEEHHHHHHHGGGSSS------CGGGSBGGGTSB--
T ss_pred CCcEEECCCCcHHHHHHHHHhcCCCEEEEEE----CC---EEEEEEehHHHHHHHHHcCC------CcccCCHHHhcc--
Confidence 6788999999999999999999999999994 35 79999999999875432210 112344555442
Q ss_pred cccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhcc
Q 014342 339 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDK 400 (426)
Q Consensus 339 ~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~~ 400 (426)
+++.++.+++++.+|+++|.+++++++||+| +|+++|+||++||++.+.+.
T Consensus 82 ----------~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~~~ 132 (135)
T 2rc3_A 82 ----------RQVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAISQ 132 (135)
T ss_dssp ----------CSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC-
T ss_pred ----------CCCeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHHhc
Confidence 4778899999999999999999999999999 79999999999999877643
No 53
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.60 E-value=5.4e-15 Score=128.48 Aligned_cols=130 Identities=13% Similarity=0.221 Sum_probs=100.1
Q ss_pred CCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccccc
Q 014342 259 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 338 (426)
Q Consensus 259 ~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i~~ 338 (426)
++++++.+++++.+|++.|.+++++++||.+ +| +++|++|..|+++++...... ....++.++|.
T Consensus 21 ~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~----~~---~~~Givt~~dl~~~~~~~~~~------~~~~~v~~~m~-- 85 (157)
T 4fry_A 21 RTIYTVTKNDFVYDAIKLMAEKGIGALLVVD----GD---DIAGIVTERDYARKVVLQERS------SKATRVEEIMT-- 85 (157)
T ss_dssp CCCCEEETTSBHHHHHHHHHHHTCSEEEEES----SS---SEEEEEEHHHHHHHSGGGTCC------SSSCBHHHHSB--
T ss_pred CCCeEECCCCcHHHHHHHHHHcCCCEEEEee----CC---EEEEEEEHHHHHHHHHhccCC------ccccCHHHHcC--
Confidence 5678999999999999999999999999962 35 699999999999987644221 12445555542
Q ss_pred cccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhccccccCCCCCccHHHHHHH
Q 014342 339 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAYAQIHLDEMNIHQVIAR 418 (426)
Q Consensus 339 ~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~~~~~~l~~~~~~v~~~l~~ 418 (426)
++++++.+++++.+|+++|.+++++++||+| +|+++|+||++||++.+........ ..+.+++..
T Consensus 86 ----------~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~~~~~~~----~~~~~~i~~ 150 (157)
T 4fry_A 86 ----------AKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIADQQFTI----SQLEHYIHG 150 (157)
T ss_dssp ----------SSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTCCCCC----C--------
T ss_pred ----------CCCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHHHHHhhH----HHHHhhccC
Confidence 4677899999999999999999999999999 7999999999999998877654333 344555543
No 54
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.59 E-value=4.1e-15 Score=128.24 Aligned_cols=113 Identities=15% Similarity=0.239 Sum_probs=95.1
Q ss_pred CCC--CceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccc
Q 014342 257 CPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSI 334 (426)
Q Consensus 257 ~~~--~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l 334 (426)
|.+ +++++.+++++.+|++.|.+++++++||+| ++| +++|+||..||++++.... .....++.++
T Consensus 34 m~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd---~~~---~~~Givt~~dl~~~~~~~~-------~~~~~~v~~~ 100 (149)
T 3k2v_A 34 MHTGDEIPHVGLQATLRDALLEITRKNLGMTAICD---DDM---NIIGIFTDGDLRRVFDTGV-------DMRDASIADV 100 (149)
T ss_dssp SBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEEC---TTC---BEEEEEEHHHHHHHHCSSS-------CCTTCBHHHH
T ss_pred hcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEEC---CCC---cEEEEecHHHHHHHHhcCC-------CcccCcHHHH
Confidence 566 788999999999999999999999999995 235 7999999999998875431 1234555555
Q ss_pred cccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHH
Q 014342 335 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITA 395 (426)
Q Consensus 335 ~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~ 395 (426)
|. ++++++.+++++.+|+++|.+++++.+||+|++ +++|+||+.||++
T Consensus 101 m~------------~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 101 MT------------RGGIRIRPGTLAVDALNLMQSRHITCVLVADGD-HLLGVVHMHDLLR 148 (149)
T ss_dssp SE------------ESCCEECTTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEHHHHTC
T ss_pred cC------------CCCeEECCCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEEEHHHhhc
Confidence 42 367789999999999999999999999999975 9999999999864
No 55
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.59 E-value=3.4e-15 Score=129.41 Aligned_cols=127 Identities=16% Similarity=0.227 Sum_probs=104.5
Q ss_pred hccccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeee-eCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhc
Q 014342 152 LSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLW-DDFKGRFVGVLSALDFILILRELGTNGSNLTEEELE 230 (426)
Q Consensus 152 l~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~-D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~ 230 (426)
|...++.|+|.....+++++++.|+.+|+++|.++++.++||+ |.+.++++|+||..|++..+....
T Consensus 17 l~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~------------ 84 (153)
T 3oco_A 17 MNDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDD------------ 84 (153)
T ss_dssp HHHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHT------------
T ss_pred cCCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCC------------
Confidence 5678899999765578899999999999999999999999999 544479999999999987654221
Q ss_pred ccchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHH
Q 014342 231 THTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDIL 310 (426)
Q Consensus 231 ~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil 310 (426)
..++.. .| ++++++.+++++.+|+..|.+++++++||+| +.| +++|+||..||+
T Consensus 85 ~~~v~~-------------------~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd---~~g---~~vGivt~~dil 138 (153)
T 3oco_A 85 KAKIST-------------------IM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVID---EYG---GTSGIITDKDVY 138 (153)
T ss_dssp TSBGGG-------------------TC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEEC---TTS---CEEEEECHHHHH
T ss_pred CCcHHH-------------------Hh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEe---CCC---CEEEEeeHHHHH
Confidence 011111 25 6789999999999999999999999999995 345 799999999999
Q ss_pred HHHHhh
Q 014342 311 KCICRH 316 (426)
Q Consensus 311 ~~l~~~ 316 (426)
+.+...
T Consensus 139 ~~l~~~ 144 (153)
T 3oco_A 139 EELFGN 144 (153)
T ss_dssp HHHHC-
T ss_pred HHHhcc
Confidence 988754
No 56
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.58 E-value=3.7e-15 Score=128.16 Aligned_cols=122 Identities=17% Similarity=0.240 Sum_probs=93.8
Q ss_pred CceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhcccc------CCCcccccccccc
Q 014342 260 PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHS------SSSLPILQQPVSS 333 (426)
Q Consensus 260 ~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~------~~~~~~~~~~v~~ 333 (426)
+++++.+++++.+|++.|.+++++++||+| +++ +++|++|..|+++++....... .........++.+
T Consensus 16 ~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd---~~~---~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 89 (152)
T 4gqw_A 16 DLHVVKPTTTVDEALELLVENRITGFPVID---EDW---KLVGLVSDYDLLALDSGDSTWKTFNAVQKLLSKTNGKLVGD 89 (152)
T ss_dssp TCCCBCTTSBHHHHHHHHHHTTCSEEEEEC---TTC---BEEEEEEHHHHTTCC----CCHHHHHHHTC-----CCBHHH
T ss_pred CCeEECCCCcHHHHHHHHHHcCCceEEEEe---CCC---eEEEEEEHHHHHHhhcccCcccchHHHHHHHHHhccccHHH
Confidence 688999999999999999999999999995 235 7999999999986532110000 0000111234444
Q ss_pred ccccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhc
Q 014342 334 IQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (426)
Q Consensus 334 l~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~ 399 (426)
+| .++++++.+++++.+|+++|.+++++++||+|++|+++|+||++||++.+.+
T Consensus 90 ~m------------~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~ 143 (152)
T 4gqw_A 90 LM------------TPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQ 143 (152)
T ss_dssp HS------------EESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred hc------------CCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHh
Confidence 43 2466789999999999999999999999999999999999999999997765
No 57
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.58 E-value=1.8e-15 Score=131.79 Aligned_cols=110 Identities=18% Similarity=0.224 Sum_probs=91.9
Q ss_pred CCC--CceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccc
Q 014342 257 CPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSI 334 (426)
Q Consensus 257 ~~~--~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l 334 (426)
|++ +++++.+++++.+|++.|.+++++++||+++ +.+ +++|+||..|+++++... ...++.++
T Consensus 44 M~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~--~~~---~lvGivt~~dl~~~~~~~----------~~~~v~~i 108 (156)
T 3oi8_A 44 MITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGE--DKD---EVLGILHAKDLLKYMFNP----------EQFHLKSI 108 (156)
T ss_dssp CEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESS--STT---CEEEEEEGGGGGGGSSCG----------GGCCHHHH
T ss_pred eeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcC--CCC---cEEEEEEHHHHHHHHHcC----------CcccHHHH
Confidence 454 6889999999999999999999999999953 334 699999999998764321 13344444
Q ss_pred cccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHH
Q 014342 335 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDIT 394 (426)
Q Consensus 335 ~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~ 394 (426)
| ++++++.+++++.+|+++|.+++++.+||+|++|+++|+||+.||+
T Consensus 109 m-------------~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 109 L-------------RPAVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp C-------------BCCCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred c-------------CCCEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 4 2567899999999999999999999999999999999999999985
No 58
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.58 E-value=3.9e-15 Score=129.24 Aligned_cols=120 Identities=17% Similarity=0.211 Sum_probs=97.0
Q ss_pred CCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccccc
Q 014342 259 RPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGT 338 (426)
Q Consensus 259 ~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i~~ 338 (426)
.+++++.+++++.+|++.|.+++++++||+| ++| +++|++|..||++++....... ..+...++.++|
T Consensus 25 ~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd---~~~---~~~Giit~~dl~~~~~~~~~~~---~~~~~~~v~~~m--- 92 (156)
T 3ctu_A 25 KNLAVLIDTHNADHATLLLSQMTYTRVPVVT---DEK---QFVGTIGLRDIMAYQMEHDLSQ---EIMADTDIVHMT--- 92 (156)
T ss_dssp GGCCCEETTSBHHHHHHHHTTCSSSEEEEEC---C-C---BEEEEEEHHHHHHHHHHHTCCH---HHHTTSBGGGGC---
T ss_pred cCceEECCCCCHHHHHHHHHHCCCceEeEEC---CCC---EEEEEEcHHHHHHHHHhccccc---cccccCcHHHhc---
Confidence 5678899999999999999999999999995 235 7999999999999886532110 011234555544
Q ss_pred cccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhccc
Q 014342 339 WVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKA 401 (426)
Q Consensus 339 ~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~~~ 401 (426)
.++++++.+++++.+|+++|.+++ ++||||++|+++|+||++||++.+.+..
T Consensus 93 ---------~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~~~ 144 (156)
T 3ctu_A 93 ---------KTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNALL 144 (156)
T ss_dssp ---------BCSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHHHS
T ss_pred ---------cCCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHHHH
Confidence 247778999999999999999886 7999999999999999999999887653
No 59
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.58 E-value=6.9e-15 Score=126.70 Aligned_cols=137 Identities=17% Similarity=0.208 Sum_probs=106.2
Q ss_pred HHhccccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhh
Q 014342 150 SFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEEL 229 (426)
Q Consensus 150 ~~l~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l 229 (426)
..|...++.|+|.....++++.++.|+.+|++.|.++++.++||+|+ +++++|+||..|++..+.... ....+..
T Consensus 10 ~~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~-~~~~~Givt~~dl~~~~~~~~----~~~~~~~ 84 (150)
T 3lqn_A 10 DEFQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDP-MYKLHGLISTAMILDGILGLE----RIEFERL 84 (150)
T ss_dssp HHHHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHTBCSS----SBCGGGG
T ss_pred HhhhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECC-CCCEEEEEEHHHHHHHHHhhc----ccchhHH
Confidence 45677899999987667899999999999999999999999999995 479999999999876553110 0111111
Q ss_pred cccchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhH
Q 014342 230 ETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDI 309 (426)
Q Consensus 230 ~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~di 309 (426)
...++.. .|.++++++.+++++.+|++.|.++++ +||+| ++| +++|+||..||
T Consensus 85 ~~~~v~~-------------------~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd---~~g---~~~Giit~~di 137 (150)
T 3lqn_A 85 EEMKVEQ-------------------VMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVN---EDG---YFEGILTRRAI 137 (150)
T ss_dssp GGCBGGG-------------------TCBSSCCEEETTCBHHHHHHHHHHCSE--EEEEC---TTC---BEEEEEEHHHH
T ss_pred hcCCHHH-------------------HhcCCCceeCCCCCHHHHHHHHHhCCE--EEEEC---CCC---cEEEEEEHHHH
Confidence 1111111 246778899999999999999999886 99995 346 79999999999
Q ss_pred HHHHHhhcc
Q 014342 310 LKCICRHFK 318 (426)
Q Consensus 310 l~~l~~~~~ 318 (426)
++++.....
T Consensus 138 l~~l~~~~~ 146 (150)
T 3lqn_A 138 LKLLNKKVR 146 (150)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHhH
Confidence 999887654
No 60
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.58 E-value=9.4e-15 Score=127.45 Aligned_cols=129 Identities=13% Similarity=0.137 Sum_probs=97.6
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccc
Q 014342 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 336 (426)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i 336 (426)
|.++++++.+++++.+|++.|.+++++++||+|+ +++| +++|+||..||++++....... ......++.+++.
T Consensus 19 m~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~-~~~~---~~~Givt~~dl~~~~~~~~~~~---~~~~~~~v~~~m~ 91 (164)
T 2pfi_A 19 MNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVES-TESQ---ILVGIVQRAQLVQALQAEPPSR---APGHQQCLQDILA 91 (164)
T ss_dssp CBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESC-TTTC---BEEEEEEHHHHHHHHHC----------CCCCBHHHHHH
T ss_pred cCCCCeEECCCCcHHHHHHHHHhCCCCceeEEec-CCCC---EEEEEEEHHHHHHHHHhhcccc---CCcccchhhhhhc
Confidence 4667888999999999999999999999999952 1245 7999999999998875432110 0112234444442
Q ss_pred cccccccCCCCCCC-eEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhcc
Q 014342 337 GTWVPRIGEANGRP-FAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDK 400 (426)
Q Consensus 337 ~~~~~~~~~~~~~~-v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~~ 400 (426)
.... ..+ ++++.+++++.+|+++|.+++++++||+| +|+++|+||++||++.+...
T Consensus 92 ~~~~-------~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~dil~~~~~~ 148 (164)
T 2pfi_A 92 RGCP-------TEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVEMKKAISNL 148 (164)
T ss_dssp TTCC-------CBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHHHHH
T ss_pred cccc-------ccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHHHHHHHHhh
Confidence 1100 012 67899999999999999999999999999 79999999999999887653
No 61
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.58 E-value=1.9e-15 Score=127.43 Aligned_cols=116 Identities=14% Similarity=0.239 Sum_probs=94.4
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHH-HHHhhccccCCCcccccccccccc
Q 014342 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILK-CICRHFKHSSSSLPILQQPVSSIQ 335 (426)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~-~l~~~~~~~~~~~~~~~~~v~~l~ 335 (426)
|.++++++.+++++.+|++.|.+++++++||+|+ ++ +++|++|..|+++ ++..... ....++.++|
T Consensus 14 m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~---~~---~~~Givt~~dl~~~~~~~~~~-------~~~~~v~~~m 80 (133)
T 1y5h_A 14 MNAGVTCVGEHETLTAAAQYMREHDIGALPICGD---DD---RLHGMLTDRDIVIKGLAAGLD-------PNTATAGELA 80 (133)
T ss_dssp SEETCCCEETTSBHHHHHHHHHHHTCSEEEEECG---GG---BEEEEEEHHHHHHTTGGGTCC-------TTTSBHHHHH
T ss_pred hcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECC---CC---eEEEEEeHHHHHHHHHhcCCC-------ccccCHHHHh
Confidence 4567788999999999999999999999999952 35 7999999999984 4433211 1234455444
Q ss_pred ccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHh
Q 014342 336 LGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (426)
Q Consensus 336 i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~ 398 (426)
. ++++++.+++++.+|+++|.+++++++||+|+ |+++|+||++||++.+.
T Consensus 81 ~------------~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l~ 130 (133)
T 1y5h_A 81 R------------DSIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHLP 130 (133)
T ss_dssp T------------TCCCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTCC
T ss_pred c------------CCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 2 47778999999999999999999999999997 99999999999997543
No 62
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.58 E-value=2.7e-15 Score=126.27 Aligned_cols=124 Identities=19% Similarity=0.291 Sum_probs=99.4
Q ss_pred ccccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhccc
Q 014342 153 STHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETH 232 (426)
Q Consensus 153 ~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~ 232 (426)
.+.++.|+|.....+++++++.|+.+|++.|.++++.++||+|++.++++|+||..|++..+. . . ..
T Consensus 3 ~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~---~-~---------~~ 69 (129)
T 3jtf_A 3 AERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYML---E-P---------AL 69 (129)
T ss_dssp -CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGT---C-T---------TS
T ss_pred CCCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhc---c-C---------Cc
Confidence 456788999866678999999999999999999999999999964479999999999865432 0 0 00
Q ss_pred chhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHH
Q 014342 233 TISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKC 312 (426)
Q Consensus 233 ~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~ 312 (426)
++.. .|. +++++.+++++.+|++.|.+++++++||+| +.| +++|+||..||++.
T Consensus 70 ~v~~-------------------~m~-~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd---~~g---~~~Giit~~Dil~~ 123 (129)
T 3jtf_A 70 DIRS-------------------LVR-PAVFIPEVKRLNVLLREFRASRNHLAIVID---EHG---GISGLVTMEDVLEQ 123 (129)
T ss_dssp CGGG-------------------GCB-CCCEEETTCBHHHHHHHHHTSSCCEEEEEC---C-C---CEEEEEEHHHHHHH
T ss_pred CHHH-------------------HhC-CCeEeCCCCcHHHHHHHHHhcCCeEEEEEe---CCC---CEEEEEEHHHHHHH
Confidence 1111 133 467899999999999999999999999995 335 69999999999998
Q ss_pred HHh
Q 014342 313 ICR 315 (426)
Q Consensus 313 l~~ 315 (426)
+..
T Consensus 124 l~g 126 (129)
T 3jtf_A 124 IVG 126 (129)
T ss_dssp HHH
T ss_pred HhC
Confidence 764
No 63
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.58 E-value=1.4e-14 Score=125.64 Aligned_cols=119 Identities=16% Similarity=0.257 Sum_probs=95.2
Q ss_pred CceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCcccccccccccccccc
Q 014342 260 PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTW 339 (426)
Q Consensus 260 ~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i~~~ 339 (426)
+++++.+++++.+|++.|.+++++++||+|+ +| +++|++|..|+++++...... . .......++.+++
T Consensus 22 ~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~---~~---~~~Givt~~dl~~~~~~~~~~-~-~~~~~~~~v~~~m---- 89 (157)
T 2emq_A 22 KVAHVQPGNYLDHALLVLTKTGYSAIPVLDT---SY---KLHGLISMTMMMDAILGLERI-E-FERLETMKVEEVM---- 89 (157)
T ss_dssp GSCCBCTTSBHHHHHHHHHHSSSSEEEEECT---TC---CEEEEEEHHHHHHHSBCSSSB-C-GGGGGTCBGGGTC----
T ss_pred cceEECCCCcHHHHHHHHHHCCceEEEEEcC---CC---CEEEEeeHHHHHHHHhccccc-c-hHHhcCCcHHHHh----
Confidence 7788999999999999999999999999952 35 699999999999875432100 0 0011233444443
Q ss_pred ccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhcc
Q 014342 340 VPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDK 400 (426)
Q Consensus 340 ~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~~ 400 (426)
.++++++.+++++.+|+++|.++++ +||||++|+++|+||++||++.+...
T Consensus 90 --------~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~~ 140 (157)
T 2emq_A 90 --------NRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNKQ 140 (157)
T ss_dssp --------BCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHHT
T ss_pred --------CCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 2577899999999999999999988 99999889999999999999987764
No 64
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.58 E-value=8.3e-15 Score=131.03 Aligned_cols=119 Identities=13% Similarity=0.172 Sum_probs=98.3
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccc
Q 014342 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 336 (426)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i 336 (426)
|.++++++.+++++.+|++.|.+++++++||+++ +| +++|++|..||++++..... .....++.++|
T Consensus 15 m~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~---~g---~~vGivt~~dl~~~~~~~~~------~~~~~~v~~im- 81 (184)
T 1pvm_A 15 MNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDD---NG---NDVGLLSERSIIKRFIPRNK------KPDEVPIRLVM- 81 (184)
T ss_dssp SBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECT---TS---CEEEEEEHHHHHHHTGGGCC------CGGGSBGGGTS-
T ss_pred cCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC---CC---cEEEEEeHHHHHHHHhhccc------CcccCCHHHHh-
Confidence 5678899999999999999999999999999952 35 69999999999987653211 11233444444
Q ss_pred cccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhc
Q 014342 337 GTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (426)
Q Consensus 337 ~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~ 399 (426)
.++++++.+++++.+|+++|.+++++.+||+|++|+++|+||+.||++.+..
T Consensus 82 -----------~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 82 -----------RKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp -----------BSSCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSCH
T ss_pred -----------CCCCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHh
Confidence 2477899999999999999999999999999988999999999999876544
No 65
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.57 E-value=1.3e-15 Score=129.57 Aligned_cols=126 Identities=13% Similarity=0.209 Sum_probs=98.3
Q ss_pred cccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhcccc
Q 014342 154 THTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHT 233 (426)
Q Consensus 154 ~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~ 233 (426)
+.++.|+|....++++++++.|+.+|+++|.++++.++||+|.+.++++|+||..|++..+.. . .....+
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~---~-------~~~~~~ 71 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILK---A-------DGDSDD 71 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGS---S-------SGGGCC
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHh---c-------cCCCcC
Confidence 467888897656789999999999999999999999999999644799999999998754321 0 000111
Q ss_pred hhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHH
Q 014342 234 ISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCI 313 (426)
Q Consensus 234 i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l 313 (426)
++. .|. +++++.+++++.+|+..|.+++++++||+| +.| +++|+||..||++.+
T Consensus 72 v~~-------------------~m~-~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd---~~g---~lvGiit~~Dil~~l 125 (136)
T 3lfr_A 72 VKK-------------------LLR-PATFVPESKRLNVLLREFRANHNHMAIVID---EYG---GVAGLVTIEDVLEQI 125 (136)
T ss_dssp GGG-------------------TCB-CCCEEETTCBHHHHHHHHHHHTCCEEEEEC---TTS---CEEEEEEHHHHHTTC
T ss_pred HHH-------------------HcC-CCeEECCCCcHHHHHHHHHhcCCeEEEEEe---CCC---CEEEEEEHHHHHHHH
Confidence 111 233 378999999999999999999999999995 345 699999999999876
Q ss_pred Hh
Q 014342 314 CR 315 (426)
Q Consensus 314 ~~ 315 (426)
..
T Consensus 126 ~~ 127 (136)
T 3lfr_A 126 VG 127 (136)
T ss_dssp --
T ss_pred hC
Confidence 54
No 66
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.56 E-value=1.7e-14 Score=125.11 Aligned_cols=136 Identities=17% Similarity=0.212 Sum_probs=106.4
Q ss_pred HhccccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhc
Q 014342 151 FLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELE 230 (426)
Q Consensus 151 ~l~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~ 230 (426)
.|...++.|+|.....+++++++.|+.+|+++|.++++.++||+|+ +++++|+||..|++..+..... ......
T Consensus 11 ~l~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~-~~~~~Giit~~dl~~~~~~~~~-----~~~~~~ 84 (156)
T 3ctu_A 11 TFLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD-EKQFVGTIGLRDIMAYQMEHDL-----SQEIMA 84 (156)
T ss_dssp HHHHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTC-----CHHHHT
T ss_pred HHHHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECC-CCEEEEEEcHHHHHHHHHhccc-----cccccc
Confidence 3444678999997778999999999999999999999999999995 4799999999999887653211 011111
Q ss_pred ccchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHH
Q 014342 231 THTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDIL 310 (426)
Q Consensus 231 ~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil 310 (426)
..++.. .|.++++++.+++++.+|++.|.+++ ++||++ ++| +++|+||..||+
T Consensus 85 ~~~v~~-------------------~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd---~~g---~~~Giit~~dil 137 (156)
T 3ctu_A 85 DTDIVH-------------------MTKTDVAVVSPDFTITEVLHKLVDES--FLPVVD---AEG---IFQGIITRKSIL 137 (156)
T ss_dssp TSBGGG-------------------GCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEEC---TTS---BEEEEEETTHHH
T ss_pred cCcHHH-------------------hccCCceeeCCCCcHHHHHHHHHHcC--eEEEEc---CCC---eEEEEEEHHHHH
Confidence 111211 24567889999999999999999886 799995 346 799999999999
Q ss_pred HHHHhhccc
Q 014342 311 KCICRHFKH 319 (426)
Q Consensus 311 ~~l~~~~~~ 319 (426)
+++......
T Consensus 138 ~~l~~~~~~ 146 (156)
T 3ctu_A 138 KAVNALLHD 146 (156)
T ss_dssp HHHHHHSCC
T ss_pred HHHHHHHHh
Confidence 999877554
No 67
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.56 E-value=2.6e-14 Score=134.28 Aligned_cols=139 Identities=12% Similarity=0.116 Sum_probs=98.8
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCC-------------
Q 014342 256 PCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSS------------- 322 (426)
Q Consensus 256 ~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~------------- 322 (426)
+|+++++++.+++++.+|+++|.+++++++||+++ .+.+ +++|+||++||++++.........
T Consensus 18 iMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~-~~~~---~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~~~~~~ 93 (250)
T 2d4z_A 18 IMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDT-PDTN---TLLGSIDRTEVEGLLQRRISAYRRQPAAAAEADEEGR 93 (250)
T ss_dssp SSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESC-TTTC---BEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCBCCC--
T ss_pred hcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEec-CCCC---eEEEEEEHHHHHHHHHHhhhhhhhhhhhhhccccccc
Confidence 47889999999999999999999999999999963 2235 799999999999887644210000
Q ss_pred --------------Cccccccc--------------------------------------------------cccccc--
Q 014342 323 --------------SLPILQQP--------------------------------------------------VSSIQL-- 336 (426)
Q Consensus 323 --------------~~~~~~~~--------------------------------------------------v~~l~i-- 336 (426)
...++... ..++.+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 173 (250)
T 2d4z_A 94 NGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFEEMLTL 173 (250)
T ss_dssp -------------------------------------------------------------------------CCSCCBH
T ss_pred ccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccccccCh
Confidence 00000000 000000
Q ss_pred ---ccc----cc-cc--C-CCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhc
Q 014342 337 ---GTW----VP-RI--G-EANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (426)
Q Consensus 337 ---~~~----~~-~~--~-~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~ 399 (426)
..| +. .+ . ..|.+.++++.++++|.+|..+|...+++++||++ .|+|+||||+.||++.+..
T Consensus 174 ~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkDl~kai~~ 246 (250)
T 2d4z_A 174 EEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQAAIEG 246 (250)
T ss_dssp HHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC
T ss_pred hhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 000 00 01 1 12446778999999999999999999999999998 6999999999999998764
No 68
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.56 E-value=9.6e-15 Score=129.43 Aligned_cols=123 Identities=20% Similarity=0.276 Sum_probs=93.6
Q ss_pred CceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhcccc---------CCCc------
Q 014342 260 PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHS---------SSSL------ 324 (426)
Q Consensus 260 ~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~---------~~~~------ 324 (426)
+++++.+++++.+|++.|.+++++++||+| +++ +++|+||..||++++....... ....
T Consensus 15 ~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd---~~~---~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (180)
T 3sl7_A 15 NLHVVKPSTSVDDALELLVEKKVTGLPVID---DNW---TLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTWKTFNEL 88 (180)
T ss_dssp GCCCBCTTSBHHHHHHHHHHHTCSEEEEEC---TTC---BEEEEEEHHHHTCC-------------------CCCSHHHH
T ss_pred CceeeCCCCcHHHHHHHHHHcCCCeEEEEC---CCC---eEEEEEEHHHHHhhhhhccccCCcccccccccchhhhhHHH
Confidence 678999999999999999999999999995 245 7999999999986432110000 0000
Q ss_pred -----cccccccccccccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhc
Q 014342 325 -----PILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (426)
Q Consensus 325 -----~~~~~~v~~l~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~ 399 (426)
.....++.++| .++++++++++++.+|+++|.+++++++||+|++|+++|+||++||++.+..
T Consensus 89 ~~~~~~~~~~~v~~~m------------~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~~ 156 (180)
T 3sl7_A 89 QKLISKTYGKVVGDLM------------TPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQ 156 (180)
T ss_dssp HHHHHTTTTCBHHHHS------------EESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred HHHHhccccccHHHHh------------CCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHH
Confidence 01122333333 3467789999999999999999999999999999999999999999997764
Q ss_pred c
Q 014342 400 K 400 (426)
Q Consensus 400 ~ 400 (426)
.
T Consensus 157 ~ 157 (180)
T 3sl7_A 157 I 157 (180)
T ss_dssp H
T ss_pred H
Confidence 3
No 69
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.56 E-value=2.2e-14 Score=130.95 Aligned_cols=115 Identities=16% Similarity=0.168 Sum_probs=97.6
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhC---CCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccc
Q 014342 256 PCPRPLVQAGPYDSLKEVALKILQN---KVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVS 332 (426)
Q Consensus 256 ~~~~~~v~v~~~~sl~~a~~~m~~~---~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~ 332 (426)
.|++.++++.+++++.+|++.|.+. +++.+||+| +.+ +++|+||.+|++.. . ...++.
T Consensus 59 iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd---~~~---~lvGivt~~dll~~-----~--------~~~~v~ 119 (205)
T 3kxr_A 59 YTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVD---EAD---KYLGTVRRYDIFKH-----E--------PHEPLI 119 (205)
T ss_dssp GCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEEC---TTC---BEEEEEEHHHHTTS-----C--------TTSBGG
T ss_pred hccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEc---CCC---eEEEEEEHHHHHhC-----C--------CcchHH
Confidence 5788899999999999999999987 899999995 245 79999999998642 0 133455
Q ss_pred cccccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhccc
Q 014342 333 SIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKA 401 (426)
Q Consensus 333 ~l~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~~~ 401 (426)
++| .++++++++++++.+|+++|.+++++.+||||++|+++|+||..||+..+....
T Consensus 120 ~im------------~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~e~ 176 (205)
T 3kxr_A 120 SLL------------SEDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVREHY 176 (205)
T ss_dssp GGC------------CSSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHHHH
T ss_pred HHh------------cCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHHHH
Confidence 554 257789999999999999999999999999999999999999999999887553
No 70
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.55 E-value=1.1e-14 Score=127.77 Aligned_cols=130 Identities=15% Similarity=0.243 Sum_probs=103.5
Q ss_pred hccccccccCCCC-CcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhc
Q 014342 152 LSTHTVYELLPDS-GKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELE 230 (426)
Q Consensus 152 l~~~~~~d~~p~s-~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~ 230 (426)
|...++.|+|... ..+++++++.++.+|+++|.++++..+||+|+ +++++|+||..|++..+..... ...
T Consensus 21 l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~--------~~~ 91 (165)
T 3fhm_A 21 GMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDA-DGVVLGIFTERDLVKAVAGQGA--------ASL 91 (165)
T ss_dssp SSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHHHHHGG--------GGG
T ss_pred hhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcC-CCeEEEEEEHHHHHHHHHhcCC--------ccc
Confidence 4456777888652 46889999999999999999999999999995 4799999999999877653210 001
Q ss_pred ccchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHH
Q 014342 231 THTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDIL 310 (426)
Q Consensus 231 ~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil 310 (426)
..++.. .|.++++++.+++++.+|++.|.+++++++||+| + | +++|+||..||+
T Consensus 92 ~~~v~~-------------------~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd---~-g---~~~Giit~~dil 145 (165)
T 3fhm_A 92 QQSVSV-------------------AMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEE---N-G---RLAGIISIGDVV 145 (165)
T ss_dssp TSBGGG-------------------TSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE---T-T---EEEEEEEHHHHH
T ss_pred cCCHHH-------------------HhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE---C-C---EEEEEEEHHHHH
Confidence 111111 2457788999999999999999999999999995 2 6 799999999999
Q ss_pred HHHHhh
Q 014342 311 KCICRH 316 (426)
Q Consensus 311 ~~l~~~ 316 (426)
+++...
T Consensus 146 ~~~~~~ 151 (165)
T 3fhm_A 146 KARIGE 151 (165)
T ss_dssp HHTTCC
T ss_pred HHHHHH
Confidence 987654
No 71
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.55 E-value=3.9e-14 Score=119.26 Aligned_cols=128 Identities=15% Similarity=0.232 Sum_probs=102.5
Q ss_pred hccccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhcc
Q 014342 152 LSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELET 231 (426)
Q Consensus 152 l~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~ 231 (426)
|.+.++.|+|.. ++++++++.++.+|++.|.++++..+||+| +++++|++|..|++..+..... ..
T Consensus 1 l~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~Givt~~dl~~~~~~~~~----------~~ 66 (133)
T 2ef7_A 1 MEEEIVKEYMKT--QVISVTKDAKLNDIAKVMTEKNIGSVIVVD--GNKPVGIITERDIVKAIGKGKS----------LE 66 (133)
T ss_dssp CCCCBGGGTSBC--SCCEEETTCBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHHHTTCC----------TT
T ss_pred CCcccHHHhccC--CCEEECCCCcHHHHHHHHHhcCCCEEEEEE--CCEEEEEEcHHHHHHHHhcCCC----------cc
Confidence 456788999976 577889999999999999999999999999 3799999999999776542110 00
Q ss_pred cchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHH
Q 014342 232 HTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILK 311 (426)
Q Consensus 232 ~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~ 311 (426)
.++.. .|.++++++.+++++.+|++.|.+++++++||+| ++| +++|+||..||++
T Consensus 67 ~~v~~-------------------~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd---~~g---~~~Giit~~dll~ 121 (133)
T 2ef7_A 67 TKAEE-------------------FMTASLITIREDSPITGALALMRQFNIRHLPVVD---DKG---NLKGIISIRDITR 121 (133)
T ss_dssp CBGGG-------------------TSEECCCCEETTSBHHHHHHHHHHHTCSEEEEEC---TTS---CEEEEEEHHHHHH
T ss_pred cCHHH-------------------HcCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEC---CCC---eEEEEEEHHHHHH
Confidence 11111 2355778899999999999999999999999995 235 6999999999999
Q ss_pred HHHhhcc
Q 014342 312 CICRHFK 318 (426)
Q Consensus 312 ~l~~~~~ 318 (426)
++.+...
T Consensus 122 ~~~~~~~ 128 (133)
T 2ef7_A 122 AIDDMFE 128 (133)
T ss_dssp HHHHHC-
T ss_pred HHHHHHH
Confidence 9877654
No 72
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.55 E-value=1.5e-14 Score=125.99 Aligned_cols=119 Identities=11% Similarity=0.167 Sum_probs=95.1
Q ss_pred CceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCcccccccccccccccc
Q 014342 260 PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTW 339 (426)
Q Consensus 260 ~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i~~~ 339 (426)
+++++.+++++.+|++.|.+++++++||+| ++| +++|+||..||++++...... . .......++.+++
T Consensus 25 ~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd---~~~---~lvGivt~~dl~~~~~~~~~~-~-~~~~~~~~v~~~m---- 92 (159)
T 1yav_A 25 KVAHVQVGNNLEHALLVLTKTGYTAIPVLD---PSY---RLHGLIGTNMIMNSIFGLERI-E-FEKLDQITVEEVM---- 92 (159)
T ss_dssp GSCCEETTCBHHHHHHHHHHHCCSEEEEEC---TTC---BEEEEEEHHHHHHHHBCSSSB-C-GGGTTTSBHHHHS----
T ss_pred ceEEECCCCcHHHHHHHHHhCCCcEEEEEC---CCC---CEEEEeEHHHHHHHhhhhccc-c-hhhhccCCHHHhc----
Confidence 678899999999999999999999999995 245 799999999999877532110 0 0011233444443
Q ss_pred ccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhcc
Q 014342 340 VPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDK 400 (426)
Q Consensus 340 ~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~~ 400 (426)
.++++++.+++++.+|+++|.++++ +||+|++|+++|+||++||++.+...
T Consensus 93 --------~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~~~ 143 (159)
T 1yav_A 93 --------LTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELNKH 143 (159)
T ss_dssp --------BCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHHHH
T ss_pred --------CCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHHHH
Confidence 2477899999999999999999887 99999889999999999999987654
No 73
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.55 E-value=1.4e-14 Score=126.00 Aligned_cols=122 Identities=16% Similarity=0.208 Sum_probs=98.5
Q ss_pred HhccccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhc
Q 014342 151 FLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELE 230 (426)
Q Consensus 151 ~l~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~ 230 (426)
.|...++.|+|.....+++++++.|+.+|++.|.++++.++||+|.+.++++|+||..|++..+.. . .
T Consensus 34 ~l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~-----------~-~ 101 (156)
T 3oi8_A 34 DFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFN-----------P-E 101 (156)
T ss_dssp HHTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSC-----------G-G
T ss_pred ccCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHc-----------C-C
Confidence 366889999998766789999999999999999999999999999654599999999998643210 0 1
Q ss_pred ccchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHH
Q 014342 231 THTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDIL 310 (426)
Q Consensus 231 ~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil 310 (426)
..++..+ |. +++++.+++++.+|++.|.+++++++||+| +.| +++|+||..||+
T Consensus 102 ~~~v~~i-------------------m~-~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd---~~g---~~~Givt~~Dil 155 (156)
T 3oi8_A 102 QFHLKSI-------------------LR-PAVFVPEGKSLTALLKEFREQRNHMAIVID---EYG---GTSGLVTFEDII 155 (156)
T ss_dssp GCCHHHH-------------------CB-CCCEEETTSBHHHHHHHHHHTTCCEEEEEC---TTS---SEEEEEEHHHHC
T ss_pred cccHHHH-------------------cC-CCEEECCCCCHHHHHHHHHhcCCeEEEEEC---CCC---CEEEEEEHHHhc
Confidence 1112221 33 368899999999999999999999999995 345 699999999985
No 74
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.54 E-value=1.1e-14 Score=122.14 Aligned_cols=124 Identities=15% Similarity=0.175 Sum_probs=99.2
Q ss_pred ccccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhccc
Q 014342 153 STHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETH 232 (426)
Q Consensus 153 ~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~ 232 (426)
.+.++.++|... +.+++++.++.+|++.|.++++..+||+|+ ++++|+||..|+...+. .... ...
T Consensus 3 ~s~~v~~~m~~~--~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~--~~~~Givt~~dl~~~~~---~~~~-------~~~ 68 (128)
T 3gby_A 3 ASVTFSYLAETD--YPVFTLGGSTADAARRLAASGCACAPVLDG--ERYLGMVHLSRLLEGRK---GWPT-------VKE 68 (128)
T ss_dssp TTCBGGGGCBCC--SCCEETTSBHHHHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHTTCS---SSCC-------TTC
T ss_pred cceEHHHhhcCC--cceECCCCCHHHHHHHHHHCCCcEEEEEEC--CEEEEEEEHHHHHHHHh---hCCc-------ccC
Confidence 357889999774 677889999999999999999999999996 79999999999874321 1000 001
Q ss_pred chhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHH
Q 014342 233 TISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKC 312 (426)
Q Consensus 233 ~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~ 312 (426)
++.. .|.++++++.+++++.+|++.|.+++++++||+| ++| +++|++|..|++++
T Consensus 69 ~v~~-------------------~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd---~~g---~~~Giit~~dll~~ 123 (128)
T 3gby_A 69 KLGE-------------------ELLETVRSYRPGEQLFDNLISVAAAKCSVVPLAD---EDG---RYEGVVSRKRILGF 123 (128)
T ss_dssp BCCG-------------------GGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEEC---TTC---BEEEEEEHHHHHHH
T ss_pred cHHH-------------------HccCCCcEECCCCCHHHHHHHHHhCCCcEEEEEC---CCC---CEEEEEEHHHHHHH
Confidence 1111 2456778899999999999999999999999995 346 79999999999998
Q ss_pred HHh
Q 014342 313 ICR 315 (426)
Q Consensus 313 l~~ 315 (426)
+.+
T Consensus 124 l~~ 126 (128)
T 3gby_A 124 LAE 126 (128)
T ss_dssp HHT
T ss_pred HHh
Confidence 764
No 75
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.54 E-value=4.4e-14 Score=125.78 Aligned_cols=123 Identities=12% Similarity=0.151 Sum_probs=95.6
Q ss_pred ceEe--CCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccC----CCc----------
Q 014342 261 LVQA--GPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSS----SSL---------- 324 (426)
Q Consensus 261 ~v~v--~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~----~~~---------- 324 (426)
++++ .+++++.+|++.|.+++++++||+++ +++| +++|+||..|+++.+........ ...
T Consensus 25 ~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~-d~~~---~lvGiit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (185)
T 2j9l_A 25 LLTVLTQDSMTVEDVETIISETTYSGFPVVVS-RESQ---RLVGFVLRRDLIISIENARKKQDGVVSTSIIYFTEHSPPL 100 (185)
T ss_dssp CCCCEESSCEEHHHHHHHHHHCCCSEEEEESC-TTTC---BEEEEEEHHHHHHHHHHHHTSCSCCCTTCEEECSSSCCCC
T ss_pred eEEEecCCCccHHHHHHHHHhcCCCceeEEEE-CCCC---eEEEEEEHHHHHHHHHhhcccCCCccccceeecccCCccc
Confidence 6778 99999999999999999999999931 1345 79999999999998765321000 000
Q ss_pred ---cccccccccccccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhcc
Q 014342 325 ---PILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDK 400 (426)
Q Consensus 325 ---~~~~~~v~~l~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~~ 400 (426)
.....++.++ |.++++++.+++++.+|+++|.+++++++||+| +|+++|+||++||++.+...
T Consensus 101 ~~~~~~~~~v~~i------------m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~~~ 166 (185)
T 2j9l_A 101 PPYTPPTLKLRNI------------LDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIAQM 166 (185)
T ss_dssp CTTCCCCEECGGG------------EESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHHH
T ss_pred ccccccCccHHHh------------hCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHHHh
Confidence 0112223332 235788999999999999999999999999999 79999999999999987654
No 76
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.53 E-value=4.5e-14 Score=129.58 Aligned_cols=112 Identities=14% Similarity=0.156 Sum_probs=95.6
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccc
Q 014342 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 336 (426)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i 336 (426)
|.++++++.+++++.+|+++|.+++++++||+| +++ +++|++|.+|+++.+. +.++.++|.
T Consensus 19 ~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd---~~~---~l~Givt~~dl~~~~~-------------~~~v~~im~ 79 (213)
T 1vr9_A 19 VTQDFPMVEESATVRECLHRMRQYQTNECIVKD---REG---HFRGVVNKEDLLDLDL-------------DSSVFNKVS 79 (213)
T ss_dssp CBSCSCEEETTCBHHHHHHHHHHTTSSEEEEEC---TTS---BEEEEEEGGGGTTSCT-------------TSBSGGGCB
T ss_pred hcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEc---CCC---EEEEEEEHHHHHhhcC-------------CCcHHHHcc
Confidence 567889999999999999999999999999995 235 7999999999875321 234555542
Q ss_pred cccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhc
Q 014342 337 GTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (426)
Q Consensus 337 ~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~ 399 (426)
++++++.+++++.+|+++|.+++++++||+|++|+++|+||.+||++.+..
T Consensus 80 ------------~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~ 130 (213)
T 1vr9_A 80 ------------LPDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIE 130 (213)
T ss_dssp ------------CTTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred ------------CCCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 467889999999999999999999999999988999999999999987653
No 77
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.53 E-value=2e-14 Score=123.49 Aligned_cols=142 Identities=15% Similarity=0.200 Sum_probs=102.0
Q ss_pred ccccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhccc
Q 014342 153 STHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETH 232 (426)
Q Consensus 153 ~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~ 232 (426)
+..++.|+|.....+++++++.++.+|+++|.++++..+||+|+ +++++|+||..|++..+..... ......+...
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~G~vt~~dl~~~~~~~~~---~~~~~~~~~~ 78 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDE-DWKLVGLVSDYDLLALDSGDST---WKTFNAVQKL 78 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECT-TCBEEEEEEHHHHTTCC----C---CHHHHHHHTC
T ss_pred ceEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeC-CCeEEEEEEHHHHHHhhcccCc---ccchHHHHHH
Confidence 45788999988767899999999999999999999999999996 4799999999998653221000 0000000000
Q ss_pred chhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHH
Q 014342 233 TISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKC 312 (426)
Q Consensus 233 ~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~ 312 (426)
........... .|.++++++.+++++.+|++.|.+++++++||++ ++| +++|+||..||+++
T Consensus 79 ~~~~~~~~v~~------------~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd---~~g---~~~Giit~~dil~~ 140 (152)
T 4gqw_A 79 LSKTNGKLVGD------------LMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVD---SDG---KLVGIITRGNVVRA 140 (152)
T ss_dssp -----CCBHHH------------HSEESCCCEESSSBHHHHHHHHHHSSCCEEEEEC---TTS---BEEEEEEHHHHHHH
T ss_pred HHHhccccHHH------------hcCCCceEECCCCcHHHHHHHHHHCCCCEEEEEC---CCC---cEEEEEEHHHHHHH
Confidence 00000000111 1456678899999999999999999999999995 346 79999999999999
Q ss_pred HHhh
Q 014342 313 ICRH 316 (426)
Q Consensus 313 l~~~ 316 (426)
+...
T Consensus 141 ~~~~ 144 (152)
T 4gqw_A 141 ALQI 144 (152)
T ss_dssp HHC-
T ss_pred HHhc
Confidence 8754
No 78
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.53 E-value=7e-14 Score=116.16 Aligned_cols=121 Identities=21% Similarity=0.287 Sum_probs=96.5
Q ss_pred cccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhcccchh
Q 014342 156 TVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTIS 235 (426)
Q Consensus 156 ~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i~ 235 (426)
++.|+|.. ++++++++.|+.+|++.|.++++..+||+| +++++|++|..|++..+..... ....++.
T Consensus 2 ~v~~~m~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~G~it~~dl~~~~~~~~~---------~~~~~v~ 68 (125)
T 1pbj_A 2 RVEDVMVT--DVDTIDITASLEDVLRNYVENAKGSSVVVK--EGVRVGIVTTWDVLEAIAEGDD---------LAEVKVW 68 (125)
T ss_dssp CHHHHCBC--SCCEEETTCBHHHHHHHHHHHCCCEEEEEE--TTEEEEEEEHHHHHHHHHHTCC---------TTTSBHH
T ss_pred CHHHhcCC--CceEECCCCcHHHHHHHHHHcCCCEEEEEe--CCeeEEEEeHHHHHHHHhcCCc---------ccccCHH
Confidence 45667755 678889999999999999999999999999 4799999999999876543110 0111122
Q ss_pred hhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHh
Q 014342 236 AWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICR 315 (426)
Q Consensus 236 ~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~ 315 (426)
.+ |.++++++.+++++.+|++.|.+++++++||++ + | +++|++|..|+++++..
T Consensus 69 ~~-------------------m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd---~-~---~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 69 EV-------------------MERDLVTISPRATIKEAAEKMVKNVVWRLLVEE---D-D---EIIGVISATDILRAKMA 122 (125)
T ss_dssp HH-------------------CBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEE---T-T---EEEEEEEHHHHHHHHC-
T ss_pred HH-------------------cCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEE---C-C---EEEEEEEHHHHHHHHHh
Confidence 21 356788999999999999999999999999995 2 5 79999999999998753
No 79
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.53 E-value=4.7e-14 Score=119.43 Aligned_cols=128 Identities=17% Similarity=0.316 Sum_probs=100.6
Q ss_pred HHhccccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHH-HHHHHHhccCCCCCChhh
Q 014342 150 SFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDF-ILILRELGTNGSNLTEEE 228 (426)
Q Consensus 150 ~~l~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dl-i~~l~~~~~~~~~~~~~~ 228 (426)
++|...++.++|.+ +++++.++.++.+|+++|.++++..+||+|+ +++++|++|..|+ ...+.. . .
T Consensus 3 ~~l~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~---~-------~ 69 (138)
T 2p9m_A 3 DTLKNIKVKDVMTK--NVITAKRHEGVVEAFEKMLKYKISSLPVIDD-ENKVIGIVTTTDIGYNLIRD---K-------Y 69 (138)
T ss_dssp --CTTCBGGGTSBC--SCCCEETTSBHHHHHHHHHHHTCCEEEEECT-TCBEEEEEEHHHHHHHHTTT---C-------C
T ss_pred cccccCCHHHhhcC--CceEECCCCcHHHHHHHHHHCCCcEEEEECC-CCeEEEEEEHHHHHHHHHhh---c-------c
Confidence 56788999999965 6778899999999999999999999999995 4799999999998 654321 0 0
Q ss_pred hcccchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCC-----CCeeEEEecCCCCCCcceEEEE
Q 014342 229 LETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNK-----VATVPIIHSTGPAGSCQEILYL 303 (426)
Q Consensus 229 l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~-----v~~lpVvd~d~~~g~~~~lvGi 303 (426)
....++..+ |.++++++.+++++.+|++.|.+++ ++++||+| ++| +++|+
T Consensus 70 ~~~~~v~~~-------------------m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd---~~g---~~~Gi 124 (138)
T 2p9m_A 70 TLETTIGDV-------------------MTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVD---KNN---KLVGI 124 (138)
T ss_dssp CSSCBHHHH-------------------SCSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEEC---TTS---BEEEE
T ss_pred cCCcCHHHH-------------------hCCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEEC---CCC---eEEEE
Confidence 011112221 3567788999999999999999999 99999995 245 79999
Q ss_pred ecHHhHHHHHHh
Q 014342 304 ASLSDILKCICR 315 (426)
Q Consensus 304 it~~dil~~l~~ 315 (426)
+|..|+++++.+
T Consensus 125 it~~dll~~~~~ 136 (138)
T 2p9m_A 125 ISDGDIIRTISK 136 (138)
T ss_dssp EEHHHHHHHHHH
T ss_pred EEHHHHHHHHHh
Confidence 999999998754
No 80
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.52 E-value=3e-14 Score=118.05 Aligned_cols=119 Identities=19% Similarity=0.376 Sum_probs=96.8
Q ss_pred cccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhcccchh
Q 014342 156 TVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTIS 235 (426)
Q Consensus 156 ~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i~ 235 (426)
++.|+|.. .+++++++.++.+|++.|.++++..+||+|+ +++++|++|..|++..+.... . ++.
T Consensus 2 ~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~G~vt~~dl~~~~~~~~--------~-----~v~ 65 (122)
T 3kpb_A 2 LVKDILSK--PPITAHSNISIMEAAKILIKHNINHLPIVDE-HGKLVGIITSWDIAKALAQNK--------K-----TIE 65 (122)
T ss_dssp BHHHHCCS--CCCCEETTSBHHHHHHHHHHHTCSCEEEECT-TSBEEEEECHHHHHHHHHTTC--------C-----BGG
T ss_pred chHHhhCC--CCEEeCCCCcHHHHHHHHHHcCCCeEEEECC-CCCEEEEEEHHHHHHHHHhcc--------c-----CHH
Confidence 45677766 5778899999999999999999999999995 479999999999887654210 0 111
Q ss_pred hhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHh
Q 014342 236 AWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICR 315 (426)
Q Consensus 236 ~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~ 315 (426)
. .|.++++++.+++++.+|++.|.+++++++||+| ++| +++|++|..||++++..
T Consensus 66 ~-------------------~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd---~~g---~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 66 E-------------------IMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVD---DYR---RVVGIVTSEDISRLFGG 120 (122)
T ss_dssp G-------------------TSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEEC---TTC---BEEEEEEHHHHHHHHC-
T ss_pred H-------------------HhcCCCeEECCCCCHHHHHHHHHHhCCCeEEEEC---CCC---CEEEEEeHHHHHHHhhc
Confidence 1 2456778899999999999999999999999995 235 79999999999998754
No 81
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.52 E-value=1.1e-13 Score=120.76 Aligned_cols=134 Identities=14% Similarity=0.224 Sum_probs=102.4
Q ss_pred cccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhcccc
Q 014342 154 THTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHT 233 (426)
Q Consensus 154 ~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~ 233 (426)
..++.|+|.. .++++.++.|+.+|+++|.++++..+||+|+ +++++|+||..|++..+......... ........+
T Consensus 4 ~~~v~dim~~--~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~-~~~lvGivt~~dl~~~~~~~~~~~~~-~~~~~~~~~ 79 (160)
T 2o16_A 4 MIKVEDMMTR--HPHTLLRTHTLNDAKHLMEALDIRHVPIVDA-NKKLLGIVSQRDLLAAQESSLQRSAQ-GDSLAFETP 79 (160)
T ss_dssp CCBGGGTSEE--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHHHHHCC----------CCCB
T ss_pred cCcHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcC-CCcEEEEEeHHHHHHHHHHhhccccc-ccchhcccC
Confidence 4578888865 6788999999999999999999999999995 47999999999998776533211000 000001111
Q ss_pred hhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHH
Q 014342 234 ISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCI 313 (426)
Q Consensus 234 i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l 313 (426)
+. . .|.++++++.+++++.+|+..|.+++++++||+| + | +++|+||..||++++
T Consensus 80 v~-------~------------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd---~-g---~lvGiit~~dil~~~ 133 (160)
T 2o16_A 80 LF-------E------------VMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVA---K-D---VLVGIITDSDFVTIA 133 (160)
T ss_dssp HH-------H------------HSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEE---T-T---EEEEEECHHHHHHHH
T ss_pred HH-------H------------HhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEE---C-C---EEEEEEEHHHHHHHH
Confidence 11 1 1467889999999999999999999999999995 2 6 799999999999987
Q ss_pred Hhhc
Q 014342 314 CRHF 317 (426)
Q Consensus 314 ~~~~ 317 (426)
....
T Consensus 134 ~~~~ 137 (160)
T 2o16_A 134 INLL 137 (160)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7643
No 82
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=99.52 E-value=1.3e-14 Score=155.73 Aligned_cols=82 Identities=17% Similarity=0.152 Sum_probs=70.3
Q ss_pred CCCcceEEEEEecC--CCceEEEEeccCCCCCC-CCCCCCCCCCCeEEEEEecCCceEEEEEEEcCeee--cCCCCCe--
Q 014342 16 VGSILVPVRFIWPN--GGRRVSLSGSFTRWSEP-MPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEWR--HDENQPH-- 88 (426)
Q Consensus 16 ~~~~~~~v~f~~~~--~~~~V~l~Gsf~~W~~~-~~m~~~~~~~~~~~~~~~L~~g~y~ykFiVDg~w~--~d~~~p~-- 88 (426)
.....++|+|+++. +|++|+|+||||||++. .+|.+. +|.|++++.||||+|||||+|||+|. +||++|.
T Consensus 13 ~~~~~~~v~f~~~~~~~~~~v~~~G~Fn~w~~~~~~~~~~---~~~~~~~~~L~~g~~~y~f~vdg~~~~~~d~~~~~~~ 89 (696)
T 4aee_A 13 GRKGRYIVKFTRHWPQYAKNIYLIGEFTSLYPGFVKLRKI---EEQGIVYLKLWPGEYGYGFQIDNDFENVLDPDNEEKK 89 (696)
T ss_dssp TEEEEEEEEEEEECCTTCSCEEEEETTSCSSTTSCBCEEE---TTEEEEEEEECSEEEEEEEEETTCCSCCCCTTCCCEE
T ss_pred CCCCcEEEEEEEECCCCCcEEEEEEecCCCCCCCcceEec---CCeEEEEEEcCCceEEEEEEECCEEeecCCCCCCccc
Confidence 45567788888776 68999999999999764 578764 79999999999999999999999999 8888873
Q ss_pred -eeCCCCCeeeEE
Q 014342 89 -VSGNYGVVNCVY 100 (426)
Q Consensus 89 -~~d~~G~~nn~~ 100 (426)
+.|.+|..|++.
T Consensus 90 y~~~~~g~~n~~~ 102 (696)
T 4aee_A 90 CVHTSFFPEYKKC 102 (696)
T ss_dssp EEECSSCTTSEEE
T ss_pred ccccCCcccccee
Confidence 568999999985
No 83
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.51 E-value=5.3e-14 Score=132.17 Aligned_cols=151 Identities=14% Similarity=0.117 Sum_probs=105.9
Q ss_pred hccccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCC-CCcEEEEeehHHHHHHHHHhccC-CC---CC--
Q 014342 152 LSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDF-KGRFVGVLSALDFILILRELGTN-GS---NL-- 224 (426)
Q Consensus 152 l~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~-~~~~vGilT~~Dli~~l~~~~~~-~~---~~-- 224 (426)
....++.|+|.+ .++++.++.++.+|.++|.+++++++||+|++ .++++|+||..||+.++...... .. ..
T Consensus 10 ~~~~~v~diMt~--~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~ 87 (250)
T 2d4z_A 10 KYNIQVGDIMVR--DVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAE 87 (250)
T ss_dssp CSSCBTTSSSBS--SCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCC
T ss_pred cCCCChHHhcCC--CCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhc
Confidence 345689999976 68899999999999999999999999999964 36899999999999876543210 00 00
Q ss_pred -C---------------hhh---hc-------------------------------------------------------
Q 014342 225 -T---------------EEE---LE------------------------------------------------------- 230 (426)
Q Consensus 225 -~---------------~~~---l~------------------------------------------------------- 230 (426)
. ... +.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (250)
T 2d4z_A 88 ADEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRF 167 (250)
T ss_dssp BCCC---------------------------------------------------------------------------C
T ss_pred ccccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCccc
Confidence 0 000 00
Q ss_pred --ccch---hhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEec
Q 014342 231 --THTI---SAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLAS 305 (426)
Q Consensus 231 --~~~i---~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit 305 (426)
..+. ..|... .+. ...+-....|...++++.++++|.++..+|.+.|++++||++ .| +|+||||
T Consensus 168 ~~~i~~~~~~~~~~~---~l~-~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~----~G---rLVGIVT 236 (250)
T 2d4z_A 168 EEMLTLEEIYRWEQR---EKN-VVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS----MG---KLVGVVA 236 (250)
T ss_dssp CSCCBHHHHHHHHHH---HTT-CBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE----TT---EEEEEEE
T ss_pred ccccChhhhhhHHHH---hcC-ceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE----CC---EEEEEEE
Confidence 0000 011111 010 001000113567788999999999999999999999999995 36 8999999
Q ss_pred HHhHHHHHHh
Q 014342 306 LSDILKCICR 315 (426)
Q Consensus 306 ~~dil~~l~~ 315 (426)
..||++++..
T Consensus 237 rkDl~kai~~ 246 (250)
T 2d4z_A 237 LAEIQAAIEG 246 (250)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHHH
Confidence 9999998763
No 84
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.51 E-value=7e-14 Score=124.46 Aligned_cols=150 Identities=11% Similarity=0.124 Sum_probs=106.2
Q ss_pred HHhccccccccCCCCCc--EEEE--cCCccHHHHHHHHHHCCCCeeeeee-CCCCcEEEEeehHHHHHHHHHhccCCCCC
Q 014342 150 SFLSTHTVYELLPDSGK--VTAL--DVNLAVKQAFHVLYEQGLPMVPLWD-DFKGRFVGVLSALDFILILRELGTNGSNL 224 (426)
Q Consensus 150 ~~l~~~~~~d~~p~s~~--vi~l--~~~~sv~~A~~~l~~~~i~slPV~D-~~~~~~vGilT~~Dli~~l~~~~~~~~~~ 224 (426)
.++...++.|+|..... ++++ +++.++.+|+++|.+++++++||++ .++++++|+||..|++..+.........+
T Consensus 6 ~~~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~ 85 (185)
T 2j9l_A 6 EFAHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGV 85 (185)
T ss_dssp ---CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCC
T ss_pred hhhccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCc
Confidence 67888999999987633 6777 9999999999999999999999993 24579999999999988765422110000
Q ss_pred Chhhhccc-c------hhhh-HHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCC
Q 014342 225 TEEELETH-T------ISAW-KVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGS 296 (426)
Q Consensus 225 ~~~~l~~~-~------i~~~-~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~ 296 (426)
........ . .... ..... ..|.++++++.+++++.+|+..|.+++++++||++ +|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~v~------------~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd----~g- 148 (185)
T 2j9l_A 86 VSTSIIYFTEHSPPLPPYTPPTLKLR------------NILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH----NG- 148 (185)
T ss_dssp CTTCEEECSSSCCCCCTTCCCCEECG------------GGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE----TT-
T ss_pred cccceeecccCCcccccccccCccHH------------HhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE----CC-
Confidence 00000000 0 0000 00000 12456788999999999999999999999999995 36
Q ss_pred cceEEEEecHHhHHHHHHhhcc
Q 014342 297 CQEILYLASLSDILKCICRHFK 318 (426)
Q Consensus 297 ~~~lvGiit~~dil~~l~~~~~ 318 (426)
+++|+||..||++++.....
T Consensus 149 --~~vGiit~~dll~~l~~~~~ 168 (185)
T 2j9l_A 149 --RLLGIITKKDVLKHIAQMAN 168 (185)
T ss_dssp --EEEEEEEHHHHHHHHHHHCC
T ss_pred --EEEEEEEHHHHHHHHHHhhc
Confidence 79999999999999886644
No 85
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.51 E-value=2.5e-13 Score=123.90 Aligned_cols=132 Identities=15% Similarity=0.202 Sum_probs=106.2
Q ss_pred HHHHHHHHh--ccccccccCCCCCcEEEEcCCccHHHHHHHHHHC---CCCeeeeeeCCCCcEEEEeehHHHHHHHHHhc
Q 014342 144 SRDRISSFL--STHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQ---GLPMVPLWDDFKGRFVGVLSALDFILILRELG 218 (426)
Q Consensus 144 ~~~~~~~~l--~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~---~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~ 218 (426)
+++.+...| .+.++.++|.. .+++++++.|+.+|++.|.++ ++..+||+|+ .++++|+||.+|++..
T Consensus 41 e~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~-~~~lvGivt~~dll~~----- 112 (205)
T 3kxr_A 41 QRQRFELYDQYSENEIGRYTDH--QMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDE-ADKYLGTVRRYDIFKH----- 112 (205)
T ss_dssp HHHHHHHHHHSCTTCGGGGCBC--CCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECT-TCBEEEEEEHHHHTTS-----
T ss_pred HHHHHHHHhCCCcchHHhhccC--ceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcC-CCeEEEEEEHHHHHhC-----
Confidence 455555554 47789999976 688999999999999999998 8999999995 5799999999997521
Q ss_pred cCCCCCChhhhcccchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcc
Q 014342 219 TNGSNLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQ 298 (426)
Q Consensus 219 ~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~ 298 (426)
.. ..++.. .|.++++++.+++++.+|++.|.+++++++||+| +.|
T Consensus 113 --~~--------~~~v~~-------------------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD---~~g--- 157 (205)
T 3kxr_A 113 --EP--------HEPLIS-------------------LLSEDSRALTANTTLLDAAEAIEHSREIELPVID---DAG--- 157 (205)
T ss_dssp --CT--------TSBGGG-------------------GCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEEC---TTS---
T ss_pred --CC--------cchHHH-------------------HhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEc---CCC---
Confidence 00 011111 2467788999999999999999999999999995 346
Q ss_pred eEEEEecHHhHHHHHHhhcc
Q 014342 299 EILYLASLSDILKCICRHFK 318 (426)
Q Consensus 299 ~lvGiit~~dil~~l~~~~~ 318 (426)
+++|+||..||++.+.....
T Consensus 158 ~lvGiIT~~Dil~~i~~e~~ 177 (205)
T 3kxr_A 158 ELIGRVTLRAATALVREHYE 177 (205)
T ss_dssp BEEEEEEHHHHHHHHHHHHC
T ss_pred eEEEEEEHHHHHHHHHHHHH
Confidence 79999999999999876543
No 86
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.50 E-value=9.2e-14 Score=120.12 Aligned_cols=136 Identities=18% Similarity=0.265 Sum_probs=102.2
Q ss_pred HHHHHhccccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCCh
Q 014342 147 RISSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTE 226 (426)
Q Consensus 147 ~~~~~l~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~ 226 (426)
...+.|...++.++ .++++++++.++.+|+++|.++++..+||+|+ +++++|+||..|++..+.... ....
T Consensus 15 ~~~~~l~~~~v~~~----~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~-~~~~vGivt~~dl~~~~~~~~--~~~~-- 85 (152)
T 2uv4_A 15 FMSKSLEELQIGTY----ANIAMVRTTTPVYVALGIFVQHRVSALPVVDE-KGRVVDIYSKFDVINLAAEKT--YNNL-- 85 (152)
T ss_dssp HHTSBHHHHTCSBC----SSCCCEETTCBHHHHHHHHHHHCCSEEEEECT-TSBEEEEEEHHHHHHHHHCSS--CCCT--
T ss_pred HHHhhHHHccCCcc----CCceEeCCCCcHHHHHHHHHHcCCceEeEECC-CCcEEEEEeHHHHHHHhcchh--hhhh--
Confidence 34456677888887 46788999999999999999999999999995 479999999999987654211 0000
Q ss_pred hhhcccchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecH
Q 014342 227 EELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASL 306 (426)
Q Consensus 227 ~~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~ 306 (426)
..++..+.... . .|.++++++.+++++.+|++.|.+++++++||+| ++| +++|+||.
T Consensus 86 ----~~~v~~~m~~~-~------------~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd---~~g---~~vGiit~ 142 (152)
T 2uv4_A 86 ----DVSVTKALQHR-S------------HYFEGVLKCYLHETLETIINRLVEAEVHRLVVVD---END---VVKGIVSL 142 (152)
T ss_dssp ----TSBGGGGGGTC-C------------HHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEEC---TTS---BEEEEEEH
T ss_pred ----cchHHHHHhhh-h------------cccCCCeEECCCCcHHHHHHHHHHcCCeEEEEEC---CCC---eEEEEEEH
Confidence 11122221100 0 0125678999999999999999999999999995 246 79999999
Q ss_pred HhHHHHHH
Q 014342 307 SDILKCIC 314 (426)
Q Consensus 307 ~dil~~l~ 314 (426)
.||++++.
T Consensus 143 ~dil~~l~ 150 (152)
T 2uv4_A 143 SDILQALV 150 (152)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHH
Confidence 99999864
No 87
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.50 E-value=1.5e-13 Score=119.05 Aligned_cols=137 Identities=19% Similarity=0.209 Sum_probs=102.8
Q ss_pred HhccccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhc
Q 014342 151 FLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELE 230 (426)
Q Consensus 151 ~l~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~ 230 (426)
.|...++.|+|.....++++.++.|+.+|++.|.++++.++||+|+ +++++|+||..|++..+.. . .........
T Consensus 7 ~l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~-~~~~~Givt~~dl~~~~~~---~-~~~~~~~~~ 81 (157)
T 2emq_A 7 EFMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDT-SYKLHGLISMTMMMDAILG---L-ERIEFERLE 81 (157)
T ss_dssp ---CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECT-TCCEEEEEEHHHHHHHSBC---S-SSBCGGGGG
T ss_pred hHhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcC-CCCEEEEeeHHHHHHHHhc---c-cccchHHhc
Confidence 4567889999976557888999999999999999999999999995 4799999999998764321 0 000000111
Q ss_pred ccchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHH
Q 014342 231 THTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDIL 310 (426)
Q Consensus 231 ~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil 310 (426)
..++.. .|.++++++.+++++.+|+..|.++++ +||++ ++| +++|+||..||+
T Consensus 82 ~~~v~~-------------------~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd---~~g---~~~Giit~~dil 134 (157)
T 2emq_A 82 TMKVEE-------------------VMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVEN---DDG---YFAGIFTRREVL 134 (157)
T ss_dssp TCBGGG-------------------TCBCCCCEEETTSBHHHHHHHHHHSSE--EEEEC---SSS---SEEEEEEHHHHH
T ss_pred CCcHHH-------------------HhCCCCceecCCCcHHHHHHHHhhCCE--EEEEc---CCC---eEEEEEEHHHHH
Confidence 111111 246778899999999999999999987 99995 235 699999999999
Q ss_pred HHHHhhccc
Q 014342 311 KCICRHFKH 319 (426)
Q Consensus 311 ~~l~~~~~~ 319 (426)
+++......
T Consensus 135 ~~~~~~~~~ 143 (157)
T 2emq_A 135 KQLNKQLHR 143 (157)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHHhhc
Confidence 998866543
No 88
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.50 E-value=4.8e-14 Score=124.87 Aligned_cols=154 Identities=17% Similarity=0.245 Sum_probs=102.2
Q ss_pred cccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCC--CCCChh-hhc
Q 014342 154 THTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNG--SNLTEE-ELE 230 (426)
Q Consensus 154 ~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~--~~~~~~-~l~ 230 (426)
..++.|+|.....++++.++.|+.+|+++|.++++.++||+|+ +++++|+||..|++..+....... ..+... ...
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~-~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 81 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDD-NWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDST 81 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHTCC-------------------C
T ss_pred ceeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECC-CCeEEEEEEHHHHHhhhhhccccCCcccccccccch
Confidence 3567888877667889999999999999999999999999996 479999999999874321110000 000000 000
Q ss_pred ccchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHH
Q 014342 231 THTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDIL 310 (426)
Q Consensus 231 ~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil 310 (426)
-..+............... ...|.++++++.+++++.+|++.|.+++++++||+| ++| +++|+||..||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~v----~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd---~~g---~~vGiit~~dil 151 (180)
T 3sl7_A 82 WKTFNELQKLISKTYGKVV----GDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVD---ADG---KLIGILTRGNVV 151 (180)
T ss_dssp CCSHHHHHHHHHTTTTCBH----HHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEEC---TTC---BEEEEEEHHHHH
T ss_pred hhhhHHHHHHHhccccccH----HHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEEC---CCC---eEEEEEEHHHHH
Confidence 0000000000000000000 012456678899999999999999999999999995 346 799999999999
Q ss_pred HHHHhhcc
Q 014342 311 KCICRHFK 318 (426)
Q Consensus 311 ~~l~~~~~ 318 (426)
+++.....
T Consensus 152 ~~~~~~~~ 159 (180)
T 3sl7_A 152 RAALQIKR 159 (180)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 99887644
No 89
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.50 E-value=2.5e-13 Score=115.63 Aligned_cols=122 Identities=16% Similarity=0.161 Sum_probs=98.4
Q ss_pred ccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCC--cEEEEeehHHHHHHHHHhccCCCCCChhhhccc
Q 014342 155 HTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKG--RFVGVLSALDFILILRELGTNGSNLTEEELETH 232 (426)
Q Consensus 155 ~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~--~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~ 232 (426)
.++.|+|.. .++++.++.|+.+|++.|.++++..+||+|+ ++ +++|+||..|++..+..... . ..
T Consensus 5 ~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~~~Givt~~dl~~~~~~~~~----~------~~ 71 (141)
T 2rih_A 5 IRTSELLKR--PPVSLPETATIREVATELAKNRVGLAVLTAR-DNPKRPVAVVSERDILRAVAQRLD----L------DG 71 (141)
T ss_dssp CBGGGGCCS--CCEEEETTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEEEEHHHHHHHHHTTCC----T------TS
T ss_pred eEHHHHhcC--CCeEeCCCCcHHHHHHHHHHcCCCEEEEEcC-CCcceeEEEEEHHHHHHHHhcCCC----C------CC
Confidence 578899975 6888999999999999999999999999995 45 89999999999876542100 0 01
Q ss_pred chhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHH
Q 014342 233 TISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKC 312 (426)
Q Consensus 233 ~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~ 312 (426)
++.. .|.++++++.++ ++.+|++.|.+++++++||+| ++| +++|+||..||++.
T Consensus 72 ~v~~-------------------~m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd---~~g---~~~Giit~~dll~~ 125 (141)
T 2rih_A 72 PAMP-------------------IANSPITVLDTD-PVHVAAEKMRRHNIRHVVVVN---KNG---ELVGVLSIRDLCFE 125 (141)
T ss_dssp BSGG-------------------GCBCCCEEETTS-BHHHHHHHHHHHTCSEEEEEC---TTS---CEEEEEEHHHHHSC
T ss_pred CHHH-------------------HcCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEc---CCC---cEEEEEEHHHHHHH
Confidence 1111 246788999999 999999999999999999995 245 79999999999876
Q ss_pred HHh
Q 014342 313 ICR 315 (426)
Q Consensus 313 l~~ 315 (426)
+..
T Consensus 126 ~~~ 128 (141)
T 2rih_A 126 RAI 128 (141)
T ss_dssp HHH
T ss_pred HHH
Confidence 553
No 90
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.50 E-value=3.8e-13 Score=116.84 Aligned_cols=135 Identities=16% Similarity=0.214 Sum_probs=101.3
Q ss_pred hccccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCe-eeeeeCCCCcEEEEeehHHHHHHHHHh----ccCCCCCCh
Q 014342 152 LSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPM-VPLWDDFKGRFVGVLSALDFILILREL----GTNGSNLTE 226 (426)
Q Consensus 152 l~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~s-lPV~D~~~~~~vGilT~~Dli~~l~~~----~~~~~~~~~ 226 (426)
+...++.|+|.. ++++++++.|+.+|+++|.++++.. +||+|++ +++|+||..|++..+... ......+..
T Consensus 13 ~~~~~v~~im~~--~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~--~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~ 88 (157)
T 1o50_A 13 MKVKDVCKLISL--KPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN--KLVGMIPVMHLLKVSGFHFFGFIPKEELIRS 88 (157)
T ss_dssp CBHHHHTTSSCC--CCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT--EEEEEEEHHHHHHHHHHHHHCCCC-------
T ss_pred hccccHhhcccC--CCceECCCCCHHHHHHHHHhCCCCccEEEEECC--EEEEEEEHHHHHHHHhhhHHhhhccHHHHHH
Confidence 455678899966 6889999999999999999999999 9999963 899999999998765421 000000000
Q ss_pred --hhhcccchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEe
Q 014342 227 --EELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLA 304 (426)
Q Consensus 227 --~~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGii 304 (426)
......++. . .|.+ ++++.+++++.+|++.|.+++++++||+| ++| +++|+|
T Consensus 89 ~~~~~~~~~v~-------~------------im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd---~~g---~~vGii 142 (157)
T 1o50_A 89 SMKRLIAKNAS-------E------------IMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVD---EKG---EIVGDL 142 (157)
T ss_dssp CCCCCSSCBHH-------H------------HCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEEC---TTS---CEEEEE
T ss_pred HHHHHcCCcHH-------H------------HcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEc---CCC---EEEEEE
Confidence 000011111 1 1456 88999999999999999999999999995 235 699999
Q ss_pred cHHhHHHHHHhh
Q 014342 305 SLSDILKCICRH 316 (426)
Q Consensus 305 t~~dil~~l~~~ 316 (426)
|..||++++...
T Consensus 143 t~~dll~~l~~~ 154 (157)
T 1o50_A 143 NSLEILLALWKG 154 (157)
T ss_dssp EHHHHHHHHHHS
T ss_pred EHHHHHHHHHHh
Confidence 999999988654
No 91
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.49 E-value=1.5e-13 Score=116.42 Aligned_cols=129 Identities=20% Similarity=0.299 Sum_probs=101.6
Q ss_pred HhccccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhc
Q 014342 151 FLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELE 230 (426)
Q Consensus 151 ~l~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~ 230 (426)
.|...++.|+|.. .+++++++.|+.+|++.|.++++.++||+|+ +++++|+||..|++..+. .... ..
T Consensus 3 ~l~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~---~~~~------~~ 70 (138)
T 2yzi_A 3 MDMKAPIKVYMTK--KLLGVKPSTSVQEASRLMMEFDVGSLVVIND-DGNVVGFFTKSDIIRRVI---VPGL------PY 70 (138)
T ss_dssp CCTTSBGGGTCBC--CCCEECTTSBHHHHHHHHHHHTCSEEEEECT-TSCEEEEEEHHHHHHHTT---TTCC------CT
T ss_pred chhhhhHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcC-CCcEEEEEeHHHHHHHHH---hcCC------cc
Confidence 3567889999975 6788999999999999999999999999995 479999999999863221 1100 00
Q ss_pred ccchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHH
Q 014342 231 THTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDIL 310 (426)
Q Consensus 231 ~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil 310 (426)
..++.. .|.++++++.+++++.+|++.|.+++++++ |+|+ +| +++|++|..||+
T Consensus 71 ~~~v~~-------------------~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~---~g---~~~Giit~~dil 124 (138)
T 2yzi_A 71 DIPVER-------------------IMTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEE---EG---KIVGIFTLSDLL 124 (138)
T ss_dssp TSBGGG-------------------TCBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEE---TT---EEEEEEEHHHHH
T ss_pred cCCHHH-------------------HhhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECC---CC---CEEEEEEHHHHH
Confidence 111111 245678899999999999999999999999 9962 46 799999999999
Q ss_pred HHHHhhc
Q 014342 311 KCICRHF 317 (426)
Q Consensus 311 ~~l~~~~ 317 (426)
+++....
T Consensus 125 ~~~~~~~ 131 (138)
T 2yzi_A 125 EASRRRL 131 (138)
T ss_dssp HHHHCCS
T ss_pred HHHHHHH
Confidence 9887543
No 92
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.49 E-value=6.9e-14 Score=120.49 Aligned_cols=121 Identities=12% Similarity=0.242 Sum_probs=97.9
Q ss_pred ccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhcccch
Q 014342 155 HTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTI 234 (426)
Q Consensus 155 ~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i 234 (426)
.++.|+|.....+++++++.|+.+|+++|.++++..+||+|+ +++++|+||..|++..+.... .....++
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~---------~~~~~~v 97 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDD-DMNIIGIFTDGDLRRVFDTGV---------DMRDASI 97 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECT-TCBEEEEEEHHHHHHHHCSSS---------CCTTCBH
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECC-CCcEEEEecHHHHHHHHhcCC---------CcccCcH
Confidence 589999977557889999999999999999999999999995 479999999999987653210 0011122
Q ss_pred hhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHH
Q 014342 235 SAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILK 311 (426)
Q Consensus 235 ~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~ 311 (426)
..+ |.++++++.+++++.+|++.|.+++++++||+|+ + +++|+||..||++
T Consensus 98 ~~~-------------------m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~----~---~~~Giit~~dil~ 148 (149)
T 3k2v_A 98 ADV-------------------MTRGGIRIRPGTLAVDALNLMQSRHITCVLVADG----D---HLLGVVHMHDLLR 148 (149)
T ss_dssp HHH-------------------SEESCCEECTTCBHHHHHHHHHHHTCSEEEEEET----T---EEEEEEEHHHHTC
T ss_pred HHH-------------------cCCCCeEECCCCCHHHHHHHHHHcCCCEEEEecC----C---EEEEEEEHHHhhc
Confidence 222 3566789999999999999999999999999962 3 5999999999874
No 93
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.48 E-value=1.1e-13 Score=116.81 Aligned_cols=125 Identities=18% Similarity=0.255 Sum_probs=96.9
Q ss_pred cccccCC-CCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhcccch
Q 014342 156 TVYELLP-DSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTI 234 (426)
Q Consensus 156 ~~~d~~p-~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i 234 (426)
++.|+|. +...+++++++.|+.+|++.|.++++..+||+| +++++|+||..|++..+.. .+. .....++
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd--~~~~~Givt~~dl~~~~~~---~~~-----~~~~~~v 76 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK--DEKLVGILTERDFSRKSYL---LDK-----PVKDTQV 76 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE--TTEEEEEEEHHHHHHHGGG---SSS-----CGGGSBG
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE--CCEEEEEEehHHHHHHHHH---cCC-----CcccCCH
Confidence 6777775 224678899999999999999999999999998 3799999999998753221 100 0011111
Q ss_pred hhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHH
Q 014342 235 SAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCIC 314 (426)
Q Consensus 235 ~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~ 314 (426)
.. .|.++++++.+++++.+|++.|.+++++++||+| +| +++|+||..||++++.
T Consensus 77 ~~-------------------~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd----~g---~~~Giit~~dll~~~~ 130 (135)
T 2rc3_A 77 KE-------------------IMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD----DG---KVIGLLSIGDLVKDAI 130 (135)
T ss_dssp GG-------------------TSBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE----TT---EEEEEEEHHHHHHHHH
T ss_pred HH-------------------hccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe----CC---EEEEEEEHHHHHHHHH
Confidence 11 2466788999999999999999999999999995 25 7999999999999876
Q ss_pred hh
Q 014342 315 RH 316 (426)
Q Consensus 315 ~~ 316 (426)
..
T Consensus 131 ~~ 132 (135)
T 2rc3_A 131 SQ 132 (135)
T ss_dssp C-
T ss_pred hc
Confidence 43
No 94
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.47 E-value=1.8e-13 Score=119.15 Aligned_cols=135 Identities=18% Similarity=0.216 Sum_probs=102.2
Q ss_pred hccccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhcc
Q 014342 152 LSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELET 231 (426)
Q Consensus 152 l~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~ 231 (426)
|...++.|+|.....+++++++.++.+|+++|.++++.++||+|+ +++++|+||..|++..+.... .+.......
T Consensus 11 l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~-~~~lvGivt~~dl~~~~~~~~----~~~~~~~~~ 85 (159)
T 1yav_A 11 LLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDP-SYRLHGLIGTNMIMNSIFGLE----RIEFEKLDQ 85 (159)
T ss_dssp CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECT-TCBEEEEEEHHHHHHHHBCSS----SBCGGGTTT
T ss_pred HhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECC-CCCEEEEeEHHHHHHHhhhhc----ccchhhhcc
Confidence 456788898876446788999999999999999999999999995 479999999999886553110 000011111
Q ss_pred cchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHH
Q 014342 232 HTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILK 311 (426)
Q Consensus 232 ~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~ 311 (426)
.++.. + |.++++++.+++++.+|++.|.++++ +||+| ++| +++|+||.+||++
T Consensus 86 ~~v~~-------~------------m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd---~~g---~~vGiit~~dil~ 138 (159)
T 1yav_A 86 ITVEE-------V------------MLTDIPRLHINDPIMKGFGMVINNGF--VCVEN---DEQ---VFEGIFTRRVVLK 138 (159)
T ss_dssp SBHHH-------H------------SBCSCCEEETTSBHHHHHHHTTTCSE--EEEEC---TTC---BEEEEEEHHHHHH
T ss_pred CCHHH-------h------------cCCCCceEcCCCCHHHHHHHHHhCCE--EEEEe---CCC---eEEEEEEHHHHHH
Confidence 11111 1 45678899999999999999999876 99995 246 7999999999999
Q ss_pred HHHhhcc
Q 014342 312 CICRHFK 318 (426)
Q Consensus 312 ~l~~~~~ 318 (426)
++.....
T Consensus 139 ~~~~~~~ 145 (159)
T 1yav_A 139 ELNKHIR 145 (159)
T ss_dssp HHHHHC-
T ss_pred HHHHHHH
Confidence 9876654
No 95
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.47 E-value=1.6e-13 Score=119.55 Aligned_cols=139 Identities=11% Similarity=0.101 Sum_probs=102.0
Q ss_pred hccccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeC-CCCcEEEEeehHHHHHHHHHhccCCCCCChhhhc
Q 014342 152 LSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDD-FKGRFVGVLSALDFILILRELGTNGSNLTEEELE 230 (426)
Q Consensus 152 l~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~-~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~ 230 (426)
+...++.|+|.. .+++++.+.++.+|+++|.+++++++||+|+ ++++++|+||..|++..+...... .. ...
T Consensus 10 ~~~~~v~dim~~--~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~--~~---~~~ 82 (164)
T 2pfi_A 10 SHHVRVEHFMNH--SITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPS--RA---PGH 82 (164)
T ss_dssp CCSCBHHHHCBC--CCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC------------CC
T ss_pred ccCCCHHHHcCC--CCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccc--cC---Ccc
Confidence 446778899976 6778899999999999999999999999996 357999999999998766421110 00 001
Q ss_pred ccchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHH
Q 014342 231 THTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDIL 310 (426)
Q Consensus 231 ~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil 310 (426)
...+..+.... . .....++++.+++++.+|++.|.+++++++||++ +| +++|+||..||+
T Consensus 83 ~~~v~~~m~~~--~-----------~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd----~g---~l~Giit~~dil 142 (164)
T 2pfi_A 83 QQCLQDILARG--C-----------PTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS----RG---RAVGCVSWVEMK 142 (164)
T ss_dssp CCBHHHHHHTT--C-----------CCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE----TT---EEEEEEEHHHHH
T ss_pred cchhhhhhccc--c-----------cccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE----CC---EEEEEEEHHHHH
Confidence 11222221110 0 0011267899999999999999999999999995 25 799999999999
Q ss_pred HHHHhhc
Q 014342 311 KCICRHF 317 (426)
Q Consensus 311 ~~l~~~~ 317 (426)
+++....
T Consensus 143 ~~~~~~~ 149 (164)
T 2pfi_A 143 KAISNLT 149 (164)
T ss_dssp HHHHHHH
T ss_pred HHHHhhh
Confidence 9987654
No 96
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.47 E-value=1.2e-13 Score=119.91 Aligned_cols=128 Identities=16% Similarity=0.270 Sum_probs=100.3
Q ss_pred ccccccCCCC----CcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhc
Q 014342 155 HTVYELLPDS----GKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELE 230 (426)
Q Consensus 155 ~~~~d~~p~s----~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~ 230 (426)
.++.|+|... ..+++++++.|+.+|+++|.++++..+||.| +++++|+||..|++..+...... ..
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~--~~~~~Givt~~dl~~~~~~~~~~--------~~ 76 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD--GDDIAGIVTERDYARKVVLQERS--------SK 76 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES--SSSEEEEEEHHHHHHHSGGGTCC--------SS
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee--CCEEEEEEEHHHHHHHHHhccCC--------cc
Confidence 3566777544 5788999999999999999999999999954 57999999999988765321110 01
Q ss_pred ccchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHH
Q 014342 231 THTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDIL 310 (426)
Q Consensus 231 ~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil 310 (426)
..++..+ |.++++++.+++++.+|++.|.+++++++||+| +| +++|+||..||+
T Consensus 77 ~~~v~~~-------------------m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd----~g---~~~Giit~~dil 130 (157)
T 4fry_A 77 ATRVEEI-------------------MTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD----GG---KLIGLISIGDLV 130 (157)
T ss_dssp SCBHHHH-------------------SBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE----TT---EEEEEEEHHHHH
T ss_pred ccCHHHH-------------------cCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE----CC---EEEEEEEHHHHH
Confidence 1112221 356778999999999999999999999999995 25 799999999999
Q ss_pred HHHHhhcc
Q 014342 311 KCICRHFK 318 (426)
Q Consensus 311 ~~l~~~~~ 318 (426)
+++.....
T Consensus 131 ~~l~~~~~ 138 (157)
T 4fry_A 131 KSVIADQQ 138 (157)
T ss_dssp HHHHTTCC
T ss_pred HHHHHHHH
Confidence 99886543
No 97
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.45 E-value=7.6e-14 Score=117.48 Aligned_cols=126 Identities=17% Similarity=0.259 Sum_probs=95.9
Q ss_pred HhccccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHH-HHHHhccCCCCCChhhh
Q 014342 151 FLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFIL-ILRELGTNGSNLTEEEL 229 (426)
Q Consensus 151 ~l~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~-~l~~~~~~~~~~~~~~l 229 (426)
.+...++.|+|.. +++++.++.|+.+|+++|.++++..+||+|+ +++++|+||..|++. .+.... ..
T Consensus 4 ~~~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~~---------~~ 71 (133)
T 1y5h_A 4 PFTMTTARDIMNA--GVTCVGEHETLTAAAQYMREHDIGALPICGD-DDRLHGMLTDRDIVIKGLAAGL---------DP 71 (133)
T ss_dssp ----CCHHHHSEE--TCCCEETTSBHHHHHHHHHHHTCSEEEEECG-GGBEEEEEEHHHHHHTTGGGTC---------CT
T ss_pred hhhhcCHHHHhcC--CceEeCCCCCHHHHHHHHHHhCCCeEEEECC-CCeEEEEEeHHHHHHHHHhcCC---------Cc
Confidence 3445677888865 5778899999999999999999999999985 479999999999863 332100 00
Q ss_pred cccchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhH
Q 014342 230 ETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDI 309 (426)
Q Consensus 230 ~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~di 309 (426)
...++..+ |.++++++.+++++.+|++.|.+++++++||++ + | +++|++|..||
T Consensus 72 ~~~~v~~~-------------------m~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd---~-g---~~~Giit~~di 125 (133)
T 1y5h_A 72 NTATAGEL-------------------ARDSIYYVDANASIQEMLNVMEEHQVRRVPVIS---E-H---RLVGIVTEADI 125 (133)
T ss_dssp TTSBHHHH-------------------HTTCCCCEETTCCHHHHHHHHHHHTCSEEEEEE---T-T---EEEEEEEHHHH
T ss_pred cccCHHHH-------------------hcCCCEEECCCCCHHHHHHHHHHcCCCEEEEEE---C-C---EEEEEEEHHHH
Confidence 11122222 346778899999999999999999999999996 2 5 79999999999
Q ss_pred HHHHH
Q 014342 310 LKCIC 314 (426)
Q Consensus 310 l~~l~ 314 (426)
++++.
T Consensus 126 l~~l~ 130 (133)
T 1y5h_A 126 ARHLP 130 (133)
T ss_dssp HHTCC
T ss_pred HHHHH
Confidence 98653
No 98
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.45 E-value=2.3e-13 Score=130.56 Aligned_cols=114 Identities=14% Similarity=0.189 Sum_probs=96.8
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhC-----CCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccc
Q 014342 256 PCPRPLVQAGPYDSLKEVALKILQN-----KVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQP 330 (426)
Q Consensus 256 ~~~~~~v~v~~~~sl~~a~~~m~~~-----~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~ 330 (426)
.|++.++++.+++++.+|++.|.++ +++++||+|+ +| +++|+||..|+++.. ...+
T Consensus 142 iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~---~~---~lvGivt~~dll~~~-------------~~~~ 202 (286)
T 2oux_A 142 IMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQ---EN---HLVGVISLRDLIVND-------------DDTL 202 (286)
T ss_dssp HCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECT---TC---BEEEEEEHHHHTTSC-------------TTSB
T ss_pred hCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcC---CC---eEEEEEEHHHHHcCC-------------CCCc
Confidence 3678899999999999999999987 8899999952 35 799999999987530 1334
Q ss_pred cccccccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhcc
Q 014342 331 VSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDK 400 (426)
Q Consensus 331 v~~l~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~~ 400 (426)
+.++|. ++++++++++++.+|+++|.+++++++||||++|+++|+||..||+..+...
T Consensus 203 v~~im~------------~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~e 260 (286)
T 2oux_A 203 IADILN------------ERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDDE 260 (286)
T ss_dssp HHHHSB------------SCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHH
T ss_pred HHHHcC------------CCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 555442 4778899999999999999999999999999999999999999999987654
No 99
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.44 E-value=4.9e-13 Score=113.73 Aligned_cols=132 Identities=16% Similarity=0.212 Sum_probs=96.0
Q ss_pred cccccc---cCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhc
Q 014342 154 THTVYE---LLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELE 230 (426)
Q Consensus 154 ~~~~~d---~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~ 230 (426)
+.++.+ +|. .++++++++.++.+|+++|.++++..+||+|+ +++++|++|..|++..+.... . ...
T Consensus 7 ~~~v~~~~~~~~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~~Givt~~dl~~~~~~~~--~------~~~ 75 (144)
T 2nyc_A 7 KIPIGDLNIITQ--DNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDE-NGYLINVYEAYDVLGLIKGGI--Y------NDL 75 (144)
T ss_dssp GSBGGGSSCCBC--SSCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-TCBEEEEEEHHHHHHHHHTC------------C
T ss_pred hcchhhcCCCCC--CCceEECCCCcHHHHHHHHHHcCcceeeEEcC-CCcEEEEEcHHHHHHHhcccc--c------ccC
Confidence 355666 444 46888999999999999999999999999995 479999999999987654210 0 001
Q ss_pred ccchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHH
Q 014342 231 THTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDIL 310 (426)
Q Consensus 231 ~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil 310 (426)
..++..+...... ...+++++.+++++.+|++.|.+++++++||+| ++| +++|+||..||+
T Consensus 76 ~~~v~~~m~~~~~-------------~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd---~~g---~~~Giit~~dil 136 (144)
T 2nyc_A 76 SLSVGEALMRRSD-------------DFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVD---DVG---RLVGVLTLSDIL 136 (144)
T ss_dssp CSBHHHHHHHCC-------------------CEECTTSBHHHHHHHHHHHTCSEEEEEC---TTS---BEEEEEEHHHHH
T ss_pred CccHHHHHhcCcc-------------ccCCCeEECCCCcHHHHHHHHHHCCCCEEEEEC---CCC---CEEEEEEHHHHH
Confidence 1122332110000 002578999999999999999999999999995 236 799999999999
Q ss_pred HHHHh
Q 014342 311 KCICR 315 (426)
Q Consensus 311 ~~l~~ 315 (426)
+.+..
T Consensus 137 ~~l~~ 141 (144)
T 2nyc_A 137 KYILL 141 (144)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98764
No 100
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.43 E-value=6.5e-13 Score=126.81 Aligned_cols=115 Identities=17% Similarity=0.254 Sum_probs=95.1
Q ss_pred CCCCCceEeCCCCCHHHHHHHHHhC-----CCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccc
Q 014342 256 PCPRPLVQAGPYDSLKEVALKILQN-----KVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQP 330 (426)
Q Consensus 256 ~~~~~~v~v~~~~sl~~a~~~m~~~-----~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~ 330 (426)
.|++.++++.+++++.+|++.|.++ ++.++||+++ .+ +++|+||.+|++.. . ...+
T Consensus 140 iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~---~~---~lvGivt~~dll~~-----~--------~~~~ 200 (278)
T 2yvy_A 140 LMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDE---KG---RLKGVLSLRDLIVA-----D--------PRTR 200 (278)
T ss_dssp TCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECT---TC---BEEEEEEHHHHHHS-----C--------TTCB
T ss_pred hcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECC---CC---CEEEEEEHHHHhcC-----C--------CCCc
Confidence 5778899999999999999999987 7899999952 35 79999999999863 0 1234
Q ss_pred cccccccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhccc
Q 014342 331 VSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDKA 401 (426)
Q Consensus 331 v~~l~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~~~ 401 (426)
+.++| .++++++++++++.+|+++|.+++++.+||||++|+++|+||..||+..+....
T Consensus 201 v~~im------------~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~~e~ 259 (278)
T 2yvy_A 201 VAEIM------------NPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAEA 259 (278)
T ss_dssp STTTS------------BSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC----
T ss_pred HHHHh------------CCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHHHHh
Confidence 45444 247788999999999999999999999999999999999999999998766543
No 101
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.41 E-value=5e-13 Score=138.99 Aligned_cols=120 Identities=13% Similarity=0.147 Sum_probs=100.0
Q ss_pred CCCCCceEeCCC-CCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccc
Q 014342 256 PCPRPLVQAGPY-DSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSI 334 (426)
Q Consensus 256 ~~~~~~v~v~~~-~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l 334 (426)
.|+++++++.++ +++.+|+++|.+++++++||+|+ +++ +++|+||.+||++.+..... ....+|.++
T Consensus 389 iM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~--~~g---~lvGiVt~~Dll~~l~~~~~-------~~~~~V~~i 456 (527)
T 3pc3_A 389 LELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQ--DDG---SVLGVVGQETLITQIVSMNR-------QQSDPAIKA 456 (527)
T ss_dssp GCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECT--TTC---CEEEEEEHHHHHHHHHHHCC-------CTTSBGGGG
T ss_pred hCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEEC--CCC---EEEEEEEHHHHHHHHHhccC-------cCCCcHHHH
Confidence 467889999999 99999999999999999999951 235 69999999999998875422 124556665
Q ss_pred cccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCC----CcEEEEEeHHHHHHHHhccc
Q 014342 335 QLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDN----DSLLDIYSRSDITALAKDKA 401 (426)
Q Consensus 335 ~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~----g~lvGiis~~DI~~~~~~~~ 401 (426)
|. ++++++.+++++.+|+++|.++++ +||||++ |+++|+||+.||++.+.+..
T Consensus 457 m~------------~~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~~ 513 (527)
T 3pc3_A 457 LN------------KRVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFIAAGK 513 (527)
T ss_dssp EE------------TTCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHHHTCC
T ss_pred hc------------CCCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHHHhcc
Confidence 52 578899999999999999987776 7999984 99999999999999887654
No 102
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.41 E-value=6.1e-13 Score=118.83 Aligned_cols=125 Identities=19% Similarity=0.279 Sum_probs=98.8
Q ss_pred ccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhcccch
Q 014342 155 HTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTI 234 (426)
Q Consensus 155 ~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i 234 (426)
.++.|+|.+ .+++++++.|+.+|+++|.++++.++||+|++ ++++|++|..|++..+..... .....++
T Consensus 9 ~~v~~im~~--~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~-g~~vGivt~~dl~~~~~~~~~--------~~~~~~v 77 (184)
T 1pvm_A 9 MRVEKIMNS--NFKTVNWNTTVFDAVKIMNENHLYGLVVKDDN-GNDVGLLSERSIIKRFIPRNK--------KPDEVPI 77 (184)
T ss_dssp CBGGGTSBT--TCCEEETTCBHHHHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHHHTGGGCC--------CGGGSBG
T ss_pred cCHHHhcCC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHhhccc--------CcccCCH
Confidence 678899964 68889999999999999999999999999854 799999999998765431100 0001111
Q ss_pred hhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHH
Q 014342 235 SAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCIC 314 (426)
Q Consensus 235 ~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~ 314 (426)
.. .|.++++++.+++++.+|++.|.+++++++||+| ++| +++|+||..||++++.
T Consensus 78 ~~-------------------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd---~~g---~~~Givt~~dll~~~~ 132 (184)
T 1pvm_A 78 RL-------------------VMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVD---DPG---RVVGIVTLTDLSRYLS 132 (184)
T ss_dssp GG-------------------TSBSSCCEEETTCBHHHHHHHHHHHTCSEEEEEC---TTC---CEEEEEEHHHHTTTSC
T ss_pred HH-------------------HhCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEc---CCC---eEEEEEEHHHHHHHHH
Confidence 11 2466788999999999999999999999999995 235 6999999999998765
Q ss_pred h
Q 014342 315 R 315 (426)
Q Consensus 315 ~ 315 (426)
.
T Consensus 133 ~ 133 (184)
T 1pvm_A 133 R 133 (184)
T ss_dssp H
T ss_pred h
Confidence 4
No 103
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.31 E-value=8.1e-12 Score=127.97 Aligned_cols=114 Identities=16% Similarity=0.233 Sum_probs=96.6
Q ss_pred CCCCCCceEeCCCCCHHHHHHHHHhC-----CCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCcccccc
Q 014342 255 RPCPRPLVQAGPYDSLKEVALKILQN-----KVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQ 329 (426)
Q Consensus 255 ~~~~~~~v~v~~~~sl~~a~~~m~~~-----~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~ 329 (426)
..|+++++++.+++++.+|++.|.++ +++++||+|+ ++ +++|++|.+|++.. . .+.
T Consensus 159 ~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~---~~---~lvGiVt~~Dll~~-----~--------~~~ 219 (473)
T 2zy9_A 159 GLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDE---KG---RLKGVLSLRDLIVA-----D--------PRT 219 (473)
T ss_dssp TTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECT---TS---BEEEEEEHHHHHHS-----C--------TTS
T ss_pred HhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECC---CC---cEEEEEEHHHHhcC-----C--------CCC
Confidence 35788999999999999999999986 5899999952 35 79999999999862 0 134
Q ss_pred ccccccccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhc
Q 014342 330 PVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (426)
Q Consensus 330 ~v~~l~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~ 399 (426)
+++++|. ++++++++++++.+|+++|.++++..+||||++|+++|+||..||++.+..
T Consensus 220 ~v~dim~------------~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~ 277 (473)
T 2zy9_A 220 RVAEIMN------------PKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 277 (473)
T ss_dssp BGGGTSB------------SSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred cHHHHhC------------CCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHH
Confidence 5555552 477899999999999999999999999999999999999999999987654
No 104
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.31 E-value=9.6e-12 Score=119.22 Aligned_cols=130 Identities=22% Similarity=0.296 Sum_probs=103.5
Q ss_pred HHHHHHHhc--cccccccCCCCCcEEEEcCCccHHHHHHHHHHC-----CCCeeeeeeCCCCcEEEEeehHHHHHHHHHh
Q 014342 145 RDRISSFLS--THTVYELLPDSGKVTALDVNLAVKQAFHVLYEQ-----GLPMVPLWDDFKGRFVGVLSALDFILILREL 217 (426)
Q Consensus 145 ~~~~~~~l~--~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~-----~i~slPV~D~~~~~~vGilT~~Dli~~l~~~ 217 (426)
+..+.+.+. ..++.++|.. .++++.++.++.+|++.|.++ ++..+||+|+ +++++|+||..|++..
T Consensus 125 ~~~i~~ll~~~~~~v~~iM~~--~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~-~~~lvGivt~~dll~~---- 197 (286)
T 2oux_A 125 AGEIKELLHYEDETAGAIMTT--EFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQ-ENHLVGVISLRDLIVN---- 197 (286)
T ss_dssp HHHHHHHTTSCTTBHHHHCBS--CCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECT-TCBEEEEEEHHHHTTS----
T ss_pred HHHHHHHhcCChHHHHHhCCC--CceEECCCCcHHHHHHHHHHcccCccceeEEEEEcC-CCeEEEEEEHHHHHcC----
Confidence 444555553 5678899965 688999999999999999998 8888999996 4799999999997531
Q ss_pred ccCCCCCChhhhcccchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCc
Q 014342 218 GTNGSNLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSC 297 (426)
Q Consensus 218 ~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~ 297 (426)
. ...++..+ |.++++++.+++++.+|++.|.+++++++||+| +.|
T Consensus 198 --~---------~~~~v~~i-------------------m~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd---~~g-- 242 (286)
T 2oux_A 198 --D---------DDTLIADI-------------------LNERVISVHVGDDQEDVAQTIRDYDFLAVPVTD---YDD-- 242 (286)
T ss_dssp --C---------TTSBHHHH-------------------SBSCCCCEETTSBHHHHHHHHHHHTCSEEEEEC---TTC--
T ss_pred --C---------CCCcHHHH-------------------cCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEc---CCC--
Confidence 0 01112221 456788999999999999999999999999995 346
Q ss_pred ceEEEEecHHhHHHHHHhhc
Q 014342 298 QEILYLASLSDILKCICRHF 317 (426)
Q Consensus 298 ~~lvGiit~~dil~~l~~~~ 317 (426)
+++|+||..||++.+....
T Consensus 243 -~lvGiIT~~Dil~~i~~e~ 261 (286)
T 2oux_A 243 -HLLGIVTVDDIIDVIDDEA 261 (286)
T ss_dssp -BEEEEEEHHHHHHHHHHHH
T ss_pred -eEEEEEEHHHHHHHHHHHh
Confidence 7999999999999887653
No 105
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.28 E-value=1.2e-11 Score=127.71 Aligned_cols=115 Identities=13% Similarity=0.188 Sum_probs=96.9
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccc
Q 014342 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 336 (426)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i 336 (426)
|..+++++.+++++.+++++|.+++++++||+++. .++ +++|+||.+|++. . ...+.++.++|.
T Consensus 119 m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g-~~~---~lvGiVt~rDl~~------~------~~~~~~V~~vM~ 182 (511)
T 3usb_A 119 VISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNL-DER---KLVGIITNRDMRF------I------QDYSIKISDVMT 182 (511)
T ss_dssp SSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCT-TTC---BEEEEEEHHHHTT------C------CCSSSBHHHHCC
T ss_pred cccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecC-CCC---EEEEEEEehHhhh------h------ccCCCcHHHhcc
Confidence 46678899999999999999999999999999521 135 7999999999853 0 112455666553
Q ss_pred cccccccCCCCCC-CeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhc
Q 014342 337 GTWVPRIGEANGR-PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (426)
Q Consensus 337 ~~~~~~~~~~~~~-~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~ 399 (426)
+ +++++++++++.+|+++|.+++++.+||||++|+++|+||+.||++.+..
T Consensus 183 ------------~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 183 ------------KEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp ------------CCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred ------------cCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhc
Confidence 3 78899999999999999999999999999999999999999999998765
No 106
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.28 E-value=9.1e-12 Score=129.44 Aligned_cols=131 Identities=15% Similarity=0.152 Sum_probs=101.5
Q ss_pred hccccccccCCCCCcEEEEcCC-ccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhc
Q 014342 152 LSTHTVYELLPDSGKVTALDVN-LAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELE 230 (426)
Q Consensus 152 l~~~~~~d~~p~s~~vi~l~~~-~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~ 230 (426)
+...++.|+|.+ .+++++++ .|+.+|+++|.++++.++||+|.++++++||||..|++..+...... .
T Consensus 381 l~~~~V~diM~~--~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~---------~ 449 (527)
T 3pc3_A 381 WWSLAIAELELP--APPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQ---------Q 449 (527)
T ss_dssp TTTSBGGGGCCC--CCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCC---------T
T ss_pred ccCCcHHHhCcC--CCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCc---------C
Confidence 345789999975 67888889 99999999999999999999993357999999999998776532110 0
Q ss_pred ccchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCC-CCCCcceEEEEecHHhH
Q 014342 231 THTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTG-PAGSCQEILYLASLSDI 309 (426)
Q Consensus 231 ~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~-~~g~~~~lvGiit~~di 309 (426)
..++.. .|.++++++.+++++.+++++|.++++ +||+|++. ..| +++||||..||
T Consensus 450 ~~~V~~-------------------im~~~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~~~~g---~lvGIVT~~Dl 505 (527)
T 3pc3_A 450 SDPAIK-------------------ALNKRVIRLNESEILGKLARVLEVDPS--VLILGKNPAGKV---ELKALATKLDV 505 (527)
T ss_dssp TSBGGG-------------------GEETTCCEEETTSBHHHHHHHHTTCSE--EEEEEECSSSCE---EEEEEEEHHHH
T ss_pred CCcHHH-------------------HhcCCCeEECCCCcHHHHHHHHhhCCE--EEEEeCCcccCC---eEEEEEEHHHH
Confidence 111111 246788999999999999999977664 69996421 025 79999999999
Q ss_pred HHHHHhhc
Q 014342 310 LKCICRHF 317 (426)
Q Consensus 310 l~~l~~~~ 317 (426)
++++..+.
T Consensus 506 l~~l~~~~ 513 (527)
T 3pc3_A 506 TTFIAAGK 513 (527)
T ss_dssp HHHHHTCC
T ss_pred HHHHHhcc
Confidence 99998654
No 107
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.26 E-value=1.8e-11 Score=116.80 Aligned_cols=121 Identities=18% Similarity=0.306 Sum_probs=97.5
Q ss_pred ccccccccCCCCCcEEEEcCCccHHHHHHHHHHC-----CCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChh
Q 014342 153 STHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQ-----GLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEE 227 (426)
Q Consensus 153 ~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~-----~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~ 227 (426)
...++.++|.. .++++.++.++.+|++.|.++ ++..+||+|+ .++++|+||..|++.. . .
T Consensus 133 ~~~~v~~iM~~--~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~-~~~lvGivt~~dll~~-----~--~----- 197 (278)
T 2yvy_A 133 EEDEAGGLMTP--EYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDE-KGRLKGVLSLRDLIVA-----D--P----- 197 (278)
T ss_dssp CTTBGGGTCBS--CCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECT-TCBEEEEEEHHHHHHS-----C--T-----
T ss_pred CcchHHhhcCC--CceEECCCCcHHHHHHHHHHccCCccceeEEEEECC-CCCEEEEEEHHHHhcC-----C--C-----
Confidence 35789999975 688999999999999999997 7999999996 4799999999998632 0 0
Q ss_pred hhcccchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHH
Q 014342 228 ELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLS 307 (426)
Q Consensus 228 ~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~ 307 (426)
..++.. .|.++++++.+++++.+|++.|.+++++++||+| +.| +++|+||..
T Consensus 198 ---~~~v~~-------------------im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd---~~g---~lvGivT~~ 249 (278)
T 2yvy_A 198 ---RTRVAE-------------------IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVD---EEG---RLVGIVTVD 249 (278)
T ss_dssp ---TCBSTT-------------------TSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEEC---TTS---BEEEEEEHH
T ss_pred ---CCcHHH-------------------HhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEe---CCC---eEEEEEEHH
Confidence 001111 2456788999999999999999999999999995 246 799999999
Q ss_pred hHHHHHHhh
Q 014342 308 DILKCICRH 316 (426)
Q Consensus 308 dil~~l~~~ 316 (426)
||++.+...
T Consensus 250 Dil~~i~~e 258 (278)
T 2yvy_A 250 DVLDVLEAE 258 (278)
T ss_dssp HHHHHC---
T ss_pred HHHHHHHHH
Confidence 999987644
No 108
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.24 E-value=6.2e-12 Score=133.37 Aligned_cols=133 Identities=12% Similarity=0.054 Sum_probs=94.4
Q ss_pred CC--CCceEeCCCCCHHHHHHHHH-hCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCC----------
Q 014342 257 CP--RPLVQAGPYDSLKEVALKIL-QNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSS---------- 323 (426)
Q Consensus 257 ~~--~~~v~v~~~~sl~~a~~~m~-~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~---------- 323 (426)
|+ ++++++.+++++.|+.+.|. +++++++||+|+ ++ +++|+||++|+++.+..........
T Consensus 459 M~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~---~~---~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~~~ 532 (632)
T 3org_A 459 MHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDA---NG---YLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLVLL 532 (632)
T ss_dssp CBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCT---TC---BBCCEESHHHHTTTTTTC-----------------
T ss_pred hhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEec---CC---eEEEEEEHHHHHHHHHHHhhhcccccccccceecc
Confidence 56 78899999999999999999 799999999962 45 7999999999998765432110000
Q ss_pred -cccccccccccccc-----------------ccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEE
Q 014342 324 -LPILQQPVSSIQLG-----------------TWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLL 385 (426)
Q Consensus 324 -~~~~~~~v~~l~i~-----------------~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lv 385 (426)
...+.+.+..+.-. ...+.+.+.|.++++++++++++.+|+++|.+++++++||+ |+|+++
T Consensus 533 ~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~G~lv 611 (632)
T 3org_A 533 DAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ERGKLV 611 (632)
T ss_dssp --------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-ETTEEE
T ss_pred CHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE-ECCEEE
Confidence 00000111110000 00011345677899999999999999999999999999999 689999
Q ss_pred EEEeHHHHHHH
Q 014342 386 DIYSRSDITAL 396 (426)
Q Consensus 386 Giis~~DI~~~ 396 (426)
|+||++||++.
T Consensus 612 GIVT~~Dll~~ 622 (632)
T 3org_A 612 GIVEREDVAYG 622 (632)
T ss_dssp EEEEGGGTEEC
T ss_pred EEEehhhHHHH
Confidence 99999999763
No 109
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.23 E-value=7.6e-11 Score=121.46 Aligned_cols=115 Identities=15% Similarity=0.204 Sum_probs=96.7
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccc
Q 014342 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 336 (426)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i 336 (426)
|..+++++.+++++.++++.|.+++++++||+++ .+++ +++|+||.+|+++. .. .+.++.++|
T Consensus 96 m~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~-~~~~---~lvGivt~~Dl~~~-----~~-------~~~~v~~im- 158 (491)
T 1zfj_A 96 VIIDPFFLTPEHKVSEAEELMQRYRISGVPIVET-LANR---KLVGIITNRDMRFI-----SD-------YNAPISEHM- 158 (491)
T ss_dssp TSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESC-TTTC---BEEEEEEHHHHHHC-----SC-------SSSBTTTSC-
T ss_pred CcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEe-CCCC---EEEEEEEHHHHhhh-----cc-------CCCcHHHHc-
Confidence 5678889999999999999999999999999951 0235 79999999999853 00 134455554
Q ss_pred cccccccCCCCCC-CeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhc
Q 014342 337 GTWVPRIGEANGR-PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (426)
Q Consensus 337 ~~~~~~~~~~~~~-~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~ 399 (426)
.+ +++++++++++.+++++|.+++++.+||||++|+++|+||+.||++.+..
T Consensus 159 -----------~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 159 -----------TSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp -----------CCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred -----------CCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhc
Confidence 24 67889999999999999999999999999999999999999999998874
No 110
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.22 E-value=2.7e-12 Score=132.48 Aligned_cols=163 Identities=16% Similarity=0.164 Sum_probs=24.8
Q ss_pred hcccccccc-CCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCC--CCcEEEEeehHHHHHHHHHhccCCCCCChhh
Q 014342 152 LSTHTVYEL-LPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDF--KGRFVGVLSALDFILILRELGTNGSNLTEEE 228 (426)
Q Consensus 152 l~~~~~~d~-~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~--~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~ 228 (426)
+.....+++ |.. .+++++++.|+.+|+++|.+++++.+||+|++ .++++|+||.+|+... .. .
T Consensus 93 v~~V~~~e~gM~~--~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~----~~---~----- 158 (503)
T 1me8_A 93 VHAVKNFKAGFVV--SDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID----LT---Q----- 158 (503)
T ss_dssp HHHHHTTTC-----------------------------------------------------------------------
T ss_pred HhhhhhcccCccc--CCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh----hc---c-----
Confidence 344455666 755 78899999999999999999999999999964 2799999999998642 00 0
Q ss_pred hcccchhhhHHHHHhhccccccCCCCCCCCCC--ceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecH
Q 014342 229 LETHTISAWKVGKLQLNLKRQMDGNGRPCPRP--LVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASL 306 (426)
Q Consensus 229 l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~--~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~ 306 (426)
...++++ .|+++ ++++.+++++.+|+++|.+++++++||+|+ +| +++|+||.
T Consensus 159 -~~~~V~d-------------------iM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe---~g---~lvGiIT~ 212 (503)
T 1me8_A 159 -TETKVSD-------------------MMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDD---DQ---HLRYIVFR 212 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -ccCcHHH-------------------HhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcC---CC---eEEEEEEe
Confidence 0001111 24555 889999999999999999999999999962 35 69999999
Q ss_pred HhHHHHHHhhccccCCCccccccccccccccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeE
Q 014342 307 SDILKCICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPI 377 (426)
Q Consensus 307 ~dil~~l~~~~~~~~~~~~~~~~~v~~l~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPV 377 (426)
.||++.+...... ......++. -..+.. ....+.++.|.+.++..+.|
T Consensus 213 ~Dil~~~~~~~~~--------~d~~~~l~v--------------~a~v~~-~~~~e~~~~l~e~gv~~l~V 260 (503)
T 1me8_A 213 KDYDRSQVCHNEL--------VDSQKRYLV--------------GAGINT-RDFRERVPALVEAGADVLCI 260 (503)
T ss_dssp ---------CCCC--------BCTTSCBCC--------------EEEECS-SSHHHHHHHHHHHTCSEEEE
T ss_pred cHHHHhhhcccch--------hcccccccc--------------ccccCc-hhHHHHHHHHHhhhccceEE
Confidence 9999976532110 111111111 123444 66777788888889987755
No 111
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.22 E-value=6.3e-10 Score=114.77 Aligned_cols=170 Identities=19% Similarity=0.207 Sum_probs=116.4
Q ss_pred HHHHHhccccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCC-CCcEEEEeehHHHHHHHHHhccCCCCCC
Q 014342 147 RISSFLSTHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDF-KGRFVGVLSALDFILILRELGTNGSNLT 225 (426)
Q Consensus 147 ~~~~~l~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~-~~~~vGilT~~Dli~~l~~~~~~~~~~~ 225 (426)
.+.+.+. ..+.|.. .+++++++.|+.+|+++|.++++..+||+|+. +++++|+||.+|+.. .. .
T Consensus 108 ~V~~V~~---~~~~m~~--d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~------~~--~-- 172 (511)
T 3usb_A 108 QVDKVKR---SESGVIS--DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRF------IQ--D-- 172 (511)
T ss_dssp HHHHHHT---SSSCSSS--SCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTT------CC--C--
T ss_pred HHHHhhc---ccccccc--CCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhh------hc--c--
Confidence 3445443 2344544 56789999999999999999999999999951 479999999999742 10 0
Q ss_pred hhhhcccchhhhHHHHHhhccccccCCCCCCCCC-CceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEe
Q 014342 226 EEELETHTISAWKVGKLQLNLKRQMDGNGRPCPR-PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLA 304 (426)
Q Consensus 226 ~~~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~-~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGii 304 (426)
...++.++ |++ +++++.+++++.+++++|.+++++.+||+| ++| +++|+|
T Consensus 173 ----~~~~V~~v-------------------M~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVD---e~g---~l~GiI 223 (511)
T 3usb_A 173 ----YSIKISDV-------------------MTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVD---NNG---VLQGLI 223 (511)
T ss_dssp ----SSSBHHHH-------------------CCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEEC---TTS---BEEEEE
T ss_pred ----CCCcHHHh-------------------cccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEe---CCC---CEeeec
Confidence 01122222 355 889999999999999999999999999995 346 799999
Q ss_pred cHHhHHHHHHhhccccCCCccccccccccccccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCC
Q 014342 305 SLSDILKCICRHFKHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDND 382 (426)
Q Consensus 305 t~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g 382 (426)
|..||++.+..... ..+.+ +.. .--..+.......+.++.|.+.++..+.|-..++
T Consensus 224 T~~Dil~~~~~p~a------------~~D~~-~rl---------~V~aavg~~~d~~era~aLveaGvd~I~Id~a~g 279 (511)
T 3usb_A 224 TIKDIEKVIEFPNS------------AKDKQ-GRL---------LVGAAVGVTADAMTRIDALVKASVDAIVLDTAHG 279 (511)
T ss_dssp EHHHHHHHHHCTTC------------CBCTT-SCB---------CCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCT
T ss_pred cHHHHHHhhhcccc------------hhhhc-cce---------eeeeeeeeccchHHHHHHHHhhccceEEeccccc
Confidence 99999998753211 00110 000 0112344444456666777788888776654443
No 112
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.21 E-value=1.2e-12 Score=135.10 Aligned_cols=117 Identities=18% Similarity=0.173 Sum_probs=0.0
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccc
Q 014342 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 336 (426)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i 336 (426)
|.++++++.+++++.+|+++|.+++++++||+|++...+ +++|+||.+|++.. . .....++.++|.
T Consensus 103 M~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g---~lvGiVt~~Dl~~~--~---------~~~~~~V~diM~ 168 (503)
T 1me8_A 103 FVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHG---VLLGLVTQRDYPID--L---------TQTETKVSDMMT 168 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCC---eEEEEEEHHHHHhh--h---------ccccCcHHHHhC
Confidence 567889999999999999999999999999996310015 69999999999863 1 112445665552
Q ss_pred cccccccCCCCCCC--eEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhc
Q 014342 337 GTWVPRIGEANGRP--FAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (426)
Q Consensus 337 ~~~~~~~~~~~~~~--v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~ 399 (426)
++ ++++++++++.+|+++|.+++++.+||||++|+++|+||++||++.+..
T Consensus 169 ------------~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~ 221 (503)
T 1me8_A 169 ------------PFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVC 221 (503)
T ss_dssp -----------------------------------------------------------------
T ss_pred ------------CCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhc
Confidence 23 8899999999999999999999999999999999999999999987653
No 113
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.20 E-value=1.4e-12 Score=131.87 Aligned_cols=112 Identities=21% Similarity=0.286 Sum_probs=0.0
Q ss_pred CCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCcccccccccccccc
Q 014342 258 PRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQLG 337 (426)
Q Consensus 258 ~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i~ 337 (426)
...++++.|+.++.+|.++|.+++++.+||+++...++ +++||||.+|+. +. . .+.+|.++|.
T Consensus 145 i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~---kLvGIvT~RD~r-f~--d----------~~~~V~evMT- 207 (556)
T 4af0_A 145 ITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDS---KLLGIVTGRDVQ-FQ--D----------AETPIKSVMT- 207 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCC---EEEEEEeccccc-cc--c----------cceEhhhhcc-
Confidence 45678999999999999999999999999996433345 799999999963 21 1 1345666652
Q ss_pred ccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHH
Q 014342 338 TWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 397 (426)
Q Consensus 338 ~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~ 397 (426)
++++|++.+.++.+|.++|.++++..+||||++|+++|+||+.||.+..
T Consensus 208 -----------~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~ 256 (556)
T 4af0_A 208 -----------TEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQ 256 (556)
T ss_dssp ------------------------------------------------------------
T ss_pred -----------cceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhh
Confidence 4789999999999999999999999999999999999999999998754
No 114
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.18 E-value=6.7e-12 Score=129.03 Aligned_cols=113 Identities=16% Similarity=0.170 Sum_probs=82.7
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccc
Q 014342 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 336 (426)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i 336 (426)
|..+++++.+++++.+++++|.+++++++||+++ ++ +++|+||.+|++. . .....++.++|.
T Consensus 95 m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~---~~---~lvGiVt~rDL~~------~------~~~~~~v~diM~ 156 (496)
T 4fxs_A 95 VVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTE---NN---ELVGIITGRDVRF------V------TDLTKSVAAVMT 156 (496)
T ss_dssp -CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECS---SS---BEEEEEEHHHHTT------C------CCTTSBGGGTSE
T ss_pred cccCceEECCCCCHHHHHHHHHHcCCcEEEEEcc---CC---EEEEEEEHHHHhh------c------ccCCCcHHHHhc
Confidence 5678899999999999999999999999999963 35 7999999999851 1 112445666552
Q ss_pred cccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHH
Q 014342 337 GTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 397 (426)
Q Consensus 337 ~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~ 397 (426)
. . .+++++++++++.+|+++|.++++..+||||++|+++|+||+.||++..
T Consensus 157 p-~---------~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 157 P-K---------ERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKAE 207 (496)
T ss_dssp E-G---------GGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEECCC-----C
T ss_pred C-C---------CCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEeehHhHHHHhh
Confidence 0 1 1578999999999999999999999999999999999999999999854
No 115
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.16 E-value=2.1e-10 Score=117.46 Aligned_cols=129 Identities=17% Similarity=0.296 Sum_probs=102.4
Q ss_pred HHHHHHHh--ccccccccCCCCCcEEEEcCCccHHHHHHHHHHC-----CCCeeeeeeCCCCcEEEEeehHHHHHHHHHh
Q 014342 145 RDRISSFL--STHTVYELLPDSGKVTALDVNLAVKQAFHVLYEQ-----GLPMVPLWDDFKGRFVGVLSALDFILILREL 217 (426)
Q Consensus 145 ~~~~~~~l--~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~-----~i~slPV~D~~~~~~vGilT~~Dli~~l~~~ 217 (426)
++.+.+.+ .+.++.++|.. .+++++++.++.+|++.|.++ ++..+||+|++ ++++|++|.+|++..
T Consensus 143 ~~~i~~~l~~~~~~v~~iM~~--~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~-~~lvGiVt~~Dll~~---- 215 (473)
T 2zy9_A 143 RAEVEALARYEEDEAGGLMTP--EYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEK-GRLKGVLSLRDLIVA---- 215 (473)
T ss_dssp HHHHHHHHTSCTTBSTTTCBS--CEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTT-SBEEEEEEHHHHHHS----
T ss_pred HHHHHHHhcCCCCCHHHhCCC--CceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCC-CcEEEEEEHHHHhcC----
Confidence 33344444 36778899975 799999999999999999986 58999999964 799999999998631
Q ss_pred ccCCCCCChhhhcccchhhhHHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCc
Q 014342 218 GTNGSNLTEEELETHTISAWKVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSC 297 (426)
Q Consensus 218 ~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~ 297 (426)
. . ..++++ .|.++++++.+++++.++++.|.+++.+++||+| +.|
T Consensus 216 -~--~--------~~~v~d-------------------im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVD---e~g-- 260 (473)
T 2zy9_A 216 -D--P--------RTRVAE-------------------IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVD---EEG-- 260 (473)
T ss_dssp -C--T--------TSBGGG-------------------TSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEEC---TTS--
T ss_pred -C--C--------CCcHHH-------------------HhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEc---CCC--
Confidence 0 0 011121 2466788999999999999999999999999995 346
Q ss_pred ceEEEEecHHhHHHHHHhh
Q 014342 298 QEILYLASLSDILKCICRH 316 (426)
Q Consensus 298 ~~lvGiit~~dil~~l~~~ 316 (426)
+++|+||..|+++.+...
T Consensus 261 -~lvGiIT~~Dil~~i~~e 278 (473)
T 2zy9_A 261 -RLVGIVTVDDVLDVLEAE 278 (473)
T ss_dssp -BEEEEEEHHHHHHHHHHH
T ss_pred -EEEEEEehHhhHHHHHHH
Confidence 799999999999987643
No 116
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.14 E-value=1.2e-11 Score=131.06 Aligned_cols=152 Identities=12% Similarity=0.131 Sum_probs=100.7
Q ss_pred ccccccccCCCCCcEEEEcCCccHHHHHHHHH-HCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccC-CCC-------
Q 014342 153 STHTVYELLPDSGKVTALDVNLAVKQAFHVLY-EQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTN-GSN------- 223 (426)
Q Consensus 153 ~~~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~-~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~-~~~------- 223 (426)
.+.++.|+|....++++++++.|+.++.+.|. +++++++||+|+ +++++|+||.+|+.+.+...... ...
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~-~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~ 529 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDA-NGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTL 529 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCT-TCBBCCEESHHHHTTTTTTC--------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEec-CCeEEEEEEHHHHHHHHHHHhhhcccccccccce
Confidence 45678899985557889999999999999999 799999999996 57999999999987654321100 000
Q ss_pred --CChhhhcccchhhhHHHH-----Hhhcc-----ccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecC
Q 014342 224 --LTEEELETHTISAWKVGK-----LQLNL-----KRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHST 291 (426)
Q Consensus 224 --~~~~~l~~~~i~~~~~~~-----~~~~~-----~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d 291 (426)
....++.+ .++...+.. ....+ ....+-....|+++++++++++++.+|++.|.+++++++||++
T Consensus 530 ~~~~~~~l~~-~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVve-- 606 (632)
T 3org_A 530 VLLDAADLSE-NIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVTE-- 606 (632)
T ss_dssp ------------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEEE--
T ss_pred eccCHHHHHh-hcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEEE--
Confidence 00000000 000000000 00000 0000011235788899999999999999999999999999993
Q ss_pred CCCCCcceEEEEecHHhHHHHH
Q 014342 292 GPAGSCQEILYLASLSDILKCI 313 (426)
Q Consensus 292 ~~~g~~~~lvGiit~~dil~~l 313 (426)
+| +++||||.+||++.+
T Consensus 607 --~G---~lvGIVT~~Dll~~~ 623 (632)
T 3org_A 607 --RG---KLVGIVEREDVAYGY 623 (632)
T ss_dssp --TT---EEEEEEEGGGTEECC
T ss_pred --CC---EEEEEEehhhHHHHH
Confidence 35 799999999997653
No 117
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.13 E-value=4.7e-12 Score=130.09 Aligned_cols=113 Identities=18% Similarity=0.173 Sum_probs=0.0
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccc
Q 014342 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 336 (426)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i 336 (426)
|..+++++.+++++.+|+++|.+++++++||++ ++ +++|+||.+|+.... ....++.++|.
T Consensus 94 m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd----~g---~lvGIVt~rDl~~~~------------~~~~~V~~vMt 154 (490)
T 4avf_A 94 IVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE----QG---ELVGIVTGRDLRVKP------------NAGDTVAAIMT 154 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE----CC---EEEEEEEhHHhhhcc------------ccCCcHHHHhc
Confidence 567788999999999999999999999999995 35 699999999985311 12345555552
Q ss_pred cccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHh
Q 014342 337 GTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (426)
Q Consensus 337 ~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~ 398 (426)
. . .+++++++++++.+|+++|.+++++.+||||++|+++|+||+.||++...
T Consensus 155 p-~---------~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 155 P-K---------DKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp --------------------------------------------------------------
T ss_pred c-C---------CCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhcc
Confidence 0 0 16889999999999999999999999999999999999999999998654
No 118
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.12 E-value=5.8e-12 Score=129.90 Aligned_cols=116 Identities=17% Similarity=0.287 Sum_probs=5.9
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccc
Q 014342 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 336 (426)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i 336 (426)
|.++++++.+++++.+|+++|.+++++++||+|+ ++ +++|+||..|+++.. . ...++.++|.
T Consensus 101 M~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~---~~---~lvGivt~~Dl~~~~-----~-------~~~~v~~im~ 162 (494)
T 1vrd_A 101 IIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDE---EG---RLVGLLTNRDVRFEK-----N-------LSKKIKDLMT 162 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccCCeEECCCCCHHHHHHHHHHcCceEEEEEcC---CC---EEEEEEEHHHHHhhc-----C-------CCCcHHHHhC
Confidence 5678899999999999999999999999999952 35 699999999998520 0 1345555552
Q ss_pred cccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhcc
Q 014342 337 GTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDK 400 (426)
Q Consensus 337 ~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~~ 400 (426)
. ..+++++.+++++.+|+++|.+++++.+||||++|+++|+||+.||++.+...
T Consensus 163 ~----------~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~~ 216 (494)
T 1vrd_A 163 P----------REKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEHP 216 (494)
T ss_dssp --------------------------------------------------------CHHHHTCT
T ss_pred C----------CCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhccc
Confidence 1 01778999999999999999999999999999999999999999999987644
No 119
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=99.11 E-value=9.5e-11 Score=124.72 Aligned_cols=68 Identities=26% Similarity=0.455 Sum_probs=60.3
Q ss_pred cceEEEEEecCCCceEEEEeccCCCCCC-CCCCCCCCCCCeEEEEEecCCceEEEEEEEcCeeecCCCCCee
Q 014342 19 ILVPVRFIWPNGGRRVSLSGSFTRWSEP-MPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEWRHDENQPHV 89 (426)
Q Consensus 19 ~~~~v~f~~~~~~~~V~l~Gsf~~W~~~-~~m~~~~~~~~~~~~~~~L~~g~y~ykFiVDg~w~~d~~~p~~ 89 (426)
....|.|.|+.+|+.++|+|+||+|.+. .+|++. ++.|.+++.||||.|+|||+|||+|..||.+|..
T Consensus 15 ~~~~~~~~~~~~~~~~yl~G~Fn~w~~~~~~m~~~---g~~~~~~v~L~~G~y~Y~f~vdg~~~~dp~n~~~ 83 (645)
T 4aef_A 15 RVAEVEFSLIREGSYAYLLGDFNAFNEGSFRMEQE---GKNWKIKIALPEGVWHYAFSIDGKFVLDPDNPER 83 (645)
T ss_dssp EEEEEEEEEECCSSCEEEEETTTTTCTTSSEEEEC---SSEEEEEEEECSEEEEEEEEETTEEECCTTCCCE
T ss_pred eEEEEEEecCCCCeEEEEEEcCCCCCCCcccceEc---CCEEEEEEEeCCceEEEEEEECCeEecCCCCCCc
Confidence 3567899999999999999999999975 477653 6899999999999999999999999999999854
No 120
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.01 E-value=2.9e-09 Score=109.66 Aligned_cols=117 Identities=19% Similarity=0.238 Sum_probs=94.6
Q ss_pred cccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeC-CCCcEEEEeehHHHHHHHHHhccCCCCCChhhhcccchhh
Q 014342 158 YELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDD-FKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTISA 236 (426)
Q Consensus 158 ~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~-~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i~~ 236 (426)
.++|.. .+++++++.++.+|+++|.++++..+||+|. +.++++|+||.+|++.. .. ...++.+
T Consensus 93 ~~im~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~-----~~---------~~~~v~~ 156 (491)
T 1zfj_A 93 ENGVII--DPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFI-----SD---------YNAPISE 156 (491)
T ss_dssp TTTTSS--SCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHC-----SC---------SSSBTTT
T ss_pred HhcCcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhh-----cc---------CCCcHHH
Confidence 567765 6788899999999999999999999999982 34799999999997632 00 0001111
Q ss_pred hHHHHHhhccccccCCCCCCCCC-CceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHh
Q 014342 237 WKVGKLQLNLKRQMDGNGRPCPR-PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICR 315 (426)
Q Consensus 237 ~~~~~~~~~~~~~~~g~~~~~~~-~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~ 315 (426)
.|++ +++++.+++++.++++.|.+++++++||+| +.+ +++|++|..||++.+..
T Consensus 157 -------------------im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd---~~g---~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 157 -------------------HMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVD---NSG---RLSGLITIKDIEKVIEF 211 (491)
T ss_dssp -------------------SCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEEC---TTS---BEEEEEEHHHHHHHHHC
T ss_pred -------------------HcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEc---CCC---cEEEEEEHHHHHHHHhc
Confidence 2455 788999999999999999999999999995 346 79999999999998764
No 121
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.00 E-value=8.9e-12 Score=129.12 Aligned_cols=117 Identities=17% Similarity=0.213 Sum_probs=65.0
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccc
Q 014342 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 336 (426)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i 336 (426)
|.++++++.+++++.+|+++|.+++++.+||+|++..++ +++|+||.+|+..... .....++.++|.
T Consensus 114 m~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~---~lvGiVt~~Dl~~~~~----------~~~~~~v~~vm~ 180 (514)
T 1jcn_A 114 FITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGS---KLVGIVTSRDIDFLAE----------KDHTTLLSEVMT 180 (514)
T ss_dssp SCSSCCCCCC-----------------CEESCC-----------CCEECTTTTC--------------------------
T ss_pred cccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCC---EEEEEEEHHHHHhhhh----------ccCCCCHHHHhC
Confidence 566788999999999999999999999999996311035 7999999999875310 012344555542
Q ss_pred cccccccCCCCCC--CeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHh
Q 014342 337 GTWVPRIGEANGR--PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (426)
Q Consensus 337 ~~~~~~~~~~~~~--~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~ 398 (426)
+ +++++.+++++.+|+++|.+++++.+||||++|+++|+||++||++.+.
T Consensus 181 ------------~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~ 232 (514)
T 1jcn_A 181 ------------PRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNRD 232 (514)
T ss_dssp ------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCCC
T ss_pred ------------CCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHhh
Confidence 3 6789999999999999999999999999999999999999999887543
No 122
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=98.94 E-value=6.6e-10 Score=114.21 Aligned_cols=116 Identities=12% Similarity=0.153 Sum_probs=79.5
Q ss_pred cccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhcccchh
Q 014342 156 TVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTIS 235 (426)
Q Consensus 156 ~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i~ 235 (426)
+..++|. ..+++++++.++.+|+++|.+++++.+||+|+ +++++|+||.+|+. ... . ...++.
T Consensus 90 ~~~~~m~--~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~-~~~lvGiVt~rDL~------~~~--~------~~~~v~ 152 (496)
T 4fxs_A 90 IFEAGVV--THPVTVRPEQTIADVMELTHYHGFAGFPVVTE-NNELVGIITGRDVR------FVT--D------LTKSVA 152 (496)
T ss_dssp HCCC--C--BCCCCBCSSSBHHHHHHHHTSSCCCEEEEECS-SSBEEEEEEHHHHT------TCC--C------TTSBGG
T ss_pred ccccccc--cCceEECCCCCHHHHHHHHHHcCCcEEEEEcc-CCEEEEEEEHHHHh------hcc--c------CCCcHH
Confidence 3456676 36788999999999999999999999999996 47999999999974 110 0 001111
Q ss_pred hhHHHHHhhccccccCCCCCCCC-C-CceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHH
Q 014342 236 AWKVGKLQLNLKRQMDGNGRPCP-R-PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCI 313 (426)
Q Consensus 236 ~~~~~~~~~~~~~~~~g~~~~~~-~-~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l 313 (426)
+ .|+ + +++++.+++++.+++++|.+++++.+||+| +.| +++|+||..||++..
T Consensus 153 d-------------------iM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVD---e~G---~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 153 A-------------------VMTPKERLATVKEGATGAEVQEKMHKARVEKILVVN---DEF---QLKGMITAKDFHKAE 207 (496)
T ss_dssp G-------------------TSEEGGGCCEEECC----CGGGTCC---CCCEEEEC---TTS---BCCEEECCC-----C
T ss_pred H-------------------HhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEc---CCC---CEEEeehHhHHHHhh
Confidence 1 134 2 578999999999999999999999999995 346 799999999999864
No 123
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.92 E-value=1.2e-09 Score=81.60 Aligned_cols=47 Identities=15% Similarity=0.322 Sum_probs=42.9
Q ss_pred eEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHh
Q 014342 351 FAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (426)
Q Consensus 351 v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~ 398 (426)
++++++++++.+|+++|.+++++++||+| +|+++|+||.+||++.+.
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~~ 48 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME-GDEILGVVTERDILDKVV 48 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHTT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 57899999999999999999999999998 589999999999986443
No 124
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.91 E-value=1.3e-10 Score=119.56 Aligned_cols=109 Identities=15% Similarity=0.335 Sum_probs=0.5
Q ss_pred CCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCccccccccccccc
Q 014342 257 CPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQL 336 (426)
Q Consensus 257 ~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~i 336 (426)
|..+++++.+++++.++++.|.+++++++||++ + + +++|+||.+|++. . ...++.++|
T Consensus 99 m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd--~--~---~lvGivt~~Dl~~---~-----------~~~~v~~im- 156 (486)
T 2cu0_A 99 IVEDVITIAPDETVDFALFLMEKHGIDGLPVVE--D--E---KVVGIITKKDIAA---R-----------EGKLVKELM- 156 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCceEECCCCCHHHHHHHHHHcCCcEEEEEE--C--C---EEEEEEEHHHhcc---C-----------CCCCHHHHc-
Confidence 567888999999999999999999999999995 2 4 6999999999875 1 123444444
Q ss_pred cccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHh
Q 014342 337 GTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (426)
Q Consensus 337 ~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~ 398 (426)
.++++++++++++.+|+++|.+++++.+||||++|+++|+||+.||++...
T Consensus 157 -----------~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 157 -----------TKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKK 207 (486)
T ss_dssp -------------------------------------------------------------C
T ss_pred -----------cCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhhh
Confidence 247788999999999999999999999999999999999999999998765
No 125
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=98.90 E-value=1.1e-09 Score=112.42 Aligned_cols=117 Identities=17% Similarity=0.252 Sum_probs=2.7
Q ss_pred ccccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhcccch
Q 014342 155 HTVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTI 234 (426)
Q Consensus 155 ~~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i 234 (426)
.++.++|.. .+++++++.|+.+|+++|.++++..+||+| .++++|+||..|+.... . ...++
T Consensus 88 k~~~~~m~~--~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd--~g~lvGIVt~rDl~~~~----~----------~~~~V 149 (490)
T 4avf_A 88 KKHETAIVR--DPVTVTPSTKIIELLQMAREYGFSGFPVVE--QGELVGIVTGRDLRVKP----N----------AGDTV 149 (490)
T ss_dssp HHCCC---------------------------------------------------------------------------
T ss_pred cccccCccc--CceEeCCCCcHHHHHHHHHHhCCCEEEEEE--CCEEEEEEEhHHhhhcc----c----------cCCcH
Confidence 345677764 578999999999999999999999999999 47999999999974110 0 00011
Q ss_pred hhhHHHHHhhccccccCCCCCCCC-C-CceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHH
Q 014342 235 SAWKVGKLQLNLKRQMDGNGRPCP-R-PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKC 312 (426)
Q Consensus 235 ~~~~~~~~~~~~~~~~~g~~~~~~-~-~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~ 312 (426)
.+ .|+ + +++++.+++++.+|+++|.+++++.+||+| ++| +++|+||..||++.
T Consensus 150 ~~-------------------vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVD---e~g---~lvGiIT~~Dil~~ 204 (490)
T 4avf_A 150 AA-------------------IMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVD---ENF---YLRGLVTFRDIEKA 204 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HH-------------------HhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEc---CCC---cEEEEEehHHhhhh
Confidence 11 244 3 689999999999999999999999999996 346 79999999999987
Q ss_pred HH
Q 014342 313 IC 314 (426)
Q Consensus 313 l~ 314 (426)
..
T Consensus 205 ~~ 206 (490)
T 4avf_A 205 KT 206 (490)
T ss_dssp --
T ss_pred cc
Confidence 53
No 126
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=98.85 E-value=1.1e-09 Score=112.70 Aligned_cols=118 Identities=20% Similarity=0.329 Sum_probs=6.3
Q ss_pred cccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhcccchh
Q 014342 156 TVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTIS 235 (426)
Q Consensus 156 ~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i~ 235 (426)
+..|+|.. ++++++++.++.+|+++|.++++..+||+|+ +++++|+||..|+... . . ...++.
T Consensus 96 ~~~~iM~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~-~~~lvGivt~~Dl~~~-~---~----------~~~~v~ 158 (494)
T 1vrd_A 96 KTENGIIY--DPITVTPDMTVKEAIDLMAEYKIGGLPVVDE-EGRLVGLLTNRDVRFE-K---N----------LSKKIK 158 (494)
T ss_dssp TC------------------------------------------------------------------------------
T ss_pred hHhhcCcc--CCeEECCCCCHHHHHHHHHHcCceEEEEEcC-CCEEEEEEEHHHHHhh-c---C----------CCCcHH
Confidence 35677865 6888999999999999999999999999995 4799999999997631 0 0 000111
Q ss_pred hhHHHHHhhccccccCCCCCCCCC--CceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHH
Q 014342 236 AWKVGKLQLNLKRQMDGNGRPCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCI 313 (426)
Q Consensus 236 ~~~~~~~~~~~~~~~~g~~~~~~~--~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l 313 (426)
+ .|++ +++++.+++++.+++++|.+++++++||+| ++| +++|+||..|+++.+
T Consensus 159 ~-------------------im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd---~~g---~lvGiIt~~Dll~~~ 213 (494)
T 1vrd_A 159 D-------------------LMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVS---KDN---KLVGLITIKDIMSVI 213 (494)
T ss_dssp ---------------------------------------------------------------------------CHHHH
T ss_pred H-------------------HhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEc---CCC---eEEEEEEHHHHHhhh
Confidence 1 2455 788999999999999999999999999996 245 799999999999987
Q ss_pred Hh
Q 014342 314 CR 315 (426)
Q Consensus 314 ~~ 315 (426)
..
T Consensus 214 ~~ 215 (494)
T 1vrd_A 214 EH 215 (494)
T ss_dssp TC
T ss_pred cc
Confidence 53
No 127
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=98.78 E-value=3.1e-09 Score=109.15 Aligned_cols=161 Identities=17% Similarity=0.277 Sum_probs=22.6
Q ss_pred cccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHHHHhccCCCCCChhhhcccchhhh
Q 014342 158 YELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILILRELGTNGSNLTEEELETHTISAW 237 (426)
Q Consensus 158 ~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i~~~ 237 (426)
.+.|. .++++++++.++.+|+++|.++++..+||+|. ++++|+||.+|++. .. ..++.+
T Consensus 96 ~~~m~--~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~--~~lvGivt~~Dl~~------~~----------~~~v~~- 154 (486)
T 2cu0_A 96 ERLIV--EDVITIAPDETVDFALFLMEKHGIDGLPVVED--EKVVGIITKKDIAA------RE----------GKLVKE- 154 (486)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred hhccc--cCceEECCCCCHHHHHHHHHHcCCcEEEEEEC--CEEEEEEEHHHhcc------CC----------CCCHHH-
Confidence 34565 47889999999999999999999999999985 78999999999753 00 001111
Q ss_pred HHHHHhhccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhc
Q 014342 238 KVGKLQLNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHF 317 (426)
Q Consensus 238 ~~~~~~~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~ 317 (426)
.|.++++++.+++++.++++.|.+++++.+||+| +.| +++|++|..||++.+...
T Consensus 155 ------------------im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVd---e~g---~lvGiiT~~Dil~~~~~~- 209 (486)
T 2cu0_A 155 ------------------LMTKEVITVPESIEVEEALKIMIENRIDRLPVVD---ERG---KLVGLITMSDLVARKKYK- 209 (486)
T ss_dssp ----------------------------------------------------------------------------CCT-
T ss_pred ------------------HccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEe---cCC---eEEEEEEHHHHHHhhhcc-
Confidence 2456788999999999999999999999999995 345 699999999999874311
Q ss_pred cccCCCccccccccccccccccccccCCCCCCCeEEEcCCCCHHHHHHHHHhcCCcEeeEEc-CCCcEEEEE
Q 014342 318 KHSSSSLPILQQPVSSIQLGTWVPRIGEANGRPFAMLRPTASLGSALALLVQADVSSIPIVD-DNDSLLDIY 388 (426)
Q Consensus 318 ~~~~~~~~~~~~~v~~l~i~~~~~~~~~~~~~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd-~~g~lvGii 388 (426)
. ...+. .+.+. --..+..++ .+.+..|.+.++..+ |++ ..|...+++
T Consensus 210 -~----------~~~~~-~g~~~---------v~~~~~~~~--~~~a~~l~~~gvd~l-vvdta~G~~~~~L 257 (486)
T 2cu0_A 210 -N----------AVRDE-NGELL---------VAAAVSPFD--IKRAIELDKAGVDVI-VVDTAHAHNLKAI 257 (486)
T ss_dssp -T----------CCBCT-TSCBC---------CEEEECTTC--HHHHHHHHHTTCSEE-EEECSCCCCHHHH
T ss_pred -c----------ccccc-CCcee---------ecceechhh--HHHHHHHHHhcCCce-EEEecCCcEeehh
Confidence 0 00000 01111 001233333 566788889999886 555 345544443
No 128
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.78 E-value=7e-10 Score=112.23 Aligned_cols=108 Identities=19% Similarity=0.295 Sum_probs=0.0
Q ss_pred cEEEEcCCccHHHHHHHHHHCCCCeeeeeeCC--CCcEEEEeehHHHHHHHHHhccCCCCCChhhhcccchhhhHHHHHh
Q 014342 166 KVTALDVNLAVKQAFHVLYEQGLPMVPLWDDF--KGRFVGVLSALDFILILRELGTNGSNLTEEELETHTISAWKVGKLQ 243 (426)
Q Consensus 166 ~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~--~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~i~~~~~~~~~ 243 (426)
.++++.++.||.+|+++|.++++..+||+|.. +++++||||.+|+- + . +.. ..+++
T Consensus 147 dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~r-f-----~--------d~~-~~V~e------- 204 (556)
T 4af0_A 147 DPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQ-F-----Q--------DAE-TPIKS------- 204 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccc-c-----c--------ccc-eEhhh-------
Confidence 47899999999999999999999999999853 47999999999952 1 0 000 01111
Q ss_pred hccccccCCCCCCCCCCceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHH
Q 014342 244 LNLKRQMDGNGRPCPRPLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCI 313 (426)
Q Consensus 244 ~~~~~~~~g~~~~~~~~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l 313 (426)
.|+++++++.++.++.+|.++|.++++..+||+| +++ +|+|+||..|+++.-
T Consensus 205 ------------vMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd---~~g---~LvGlIT~kDi~k~~ 256 (556)
T 4af0_A 205 ------------VMTTEVVTGSSPITLEKANSLLRETKKGKLPIVD---SNG---HLVSLVARSDLLKNQ 256 (556)
T ss_dssp ----------------------------------------------------------------------
T ss_pred ------------hcccceEEecCCCCHHHHHHHHHHccccceeEEc---cCC---cEEEEEEechhhhhh
Confidence 3577899999999999999999999999999996 345 799999999998753
No 129
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.74 E-value=1.1e-08 Score=75.73 Aligned_cols=50 Identities=16% Similarity=0.316 Sum_probs=45.4
Q ss_pred CeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhcc
Q 014342 350 PFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKDK 400 (426)
Q Consensus 350 ~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~~ 400 (426)
+++++.+++++.+|+++|.+++++++||+|+ |+++|+||.+||++.+..+
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~~ 50 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVAK 50 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTTT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHc
Confidence 3578999999999999999999999999997 9999999999999876543
No 130
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.73 E-value=1.4e-08 Score=75.83 Aligned_cols=62 Identities=23% Similarity=0.253 Sum_probs=49.1
Q ss_pred ceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHHHHHhhccccCCCcccccccccccc
Q 014342 261 LVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILKCICRHFKHSSSSLPILQQPVSSIQ 335 (426)
Q Consensus 261 ~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~~l~~~~~~~~~~~~~~~~~v~~l~ 335 (426)
++++.|++++.+|+++|.+++++++||++ +| +++||+|.+||++.+.... ....+.+++++|
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d----~~---~lvGIvT~~Di~~~~~~~~------~~~~~~~V~~iM 63 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME----GD---EILGVVTERDILDKVVAKG------KNPKEVKVEEIM 63 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE----TT---EEEEEEEHHHHHHHTTTTT------CCGGGCBGGGTC
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE----CC---EEEEEEEHHHHHHHHHhcC------CCcccCCHHHhc
Confidence 57899999999999999999999999995 25 7999999999987654321 123345666665
No 131
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=98.70 E-value=7.8e-10 Score=114.48 Aligned_cols=119 Identities=18% Similarity=0.231 Sum_probs=66.2
Q ss_pred cccccCCCCCcEEEEcCCccHHHHHHHHHHCCCCeeeeeeCC--CCcEEEEeehHHHHHHHHHhccCCCCCChhhhcccc
Q 014342 156 TVYELLPDSGKVTALDVNLAVKQAFHVLYEQGLPMVPLWDDF--KGRFVGVLSALDFILILRELGTNGSNLTEEELETHT 233 (426)
Q Consensus 156 ~~~d~~p~s~~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~--~~~~vGilT~~Dli~~l~~~~~~~~~~~~~~l~~~~ 233 (426)
++.++|.. .++++.++.++.+|+++|.+++++.+||+|++ .++++|+||..|+..... .....+
T Consensus 109 ~~~~im~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~------------~~~~~~ 174 (514)
T 1jcn_A 109 NFEQGFIT--DPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAE------------KDHTTL 174 (514)
T ss_dssp TCCTTSCS--SCCCCCC-----------------CEESCC--------CCEECTTTTC----------------------
T ss_pred hhhhcccc--CCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhh------------ccCCCC
Confidence 67788875 57789999999999999999999999999963 479999999999753210 000001
Q ss_pred hhhhHHHHHhhccccccCCCCCCCCC--CceEeCCCCCHHHHHHHHHhCCCCeeEEEecCCCCCCcceEEEEecHHhHHH
Q 014342 234 ISAWKVGKLQLNLKRQMDGNGRPCPR--PLVQAGPYDSLKEVALKILQNKVATVPIIHSTGPAGSCQEILYLASLSDILK 311 (426)
Q Consensus 234 i~~~~~~~~~~~~~~~~~g~~~~~~~--~~v~v~~~~sl~~a~~~m~~~~v~~lpVvd~d~~~g~~~~lvGiit~~dil~ 311 (426)
+.+ .|.+ +++++.+++++.+|+++|.+++++.+||+| ++| +++|+||++||++
T Consensus 175 v~~-------------------vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd---~~g---~lvGiIt~~Dll~ 229 (514)
T 1jcn_A 175 LSE-------------------VMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVN---DCD---ELVAIIARTDLKK 229 (514)
T ss_dssp -------------------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEES---SSS---CCC----CCCCSS
T ss_pred HHH-------------------HhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEEC---CCC---eEEEEEEHHHHHH
Confidence 111 2455 788999999999999999999999999995 245 7999999999987
Q ss_pred HH
Q 014342 312 CI 313 (426)
Q Consensus 312 ~l 313 (426)
.+
T Consensus 230 ~~ 231 (514)
T 1jcn_A 230 NR 231 (514)
T ss_dssp CC
T ss_pred Hh
Confidence 54
No 132
>2z0b_A GDE5, KIAA1434, putative glycerophosphodiester phosphodiesterase; CBM20 domain, starch-binding, hydrolase, STR genomics, NPPSFA; 2.00A {Homo sapiens}
Probab=98.50 E-value=2.2e-07 Score=78.05 Aligned_cols=58 Identities=21% Similarity=0.424 Sum_probs=48.1
Q ss_pred cceEEEEEecC---CCceEEEEec---cCCCCCC--CCCCCCC--CCCCeEEEEEecCCce-EEEEEEE
Q 014342 19 ILVPVRFIWPN---GGRRVSLSGS---FTRWSEP--MPMSPSE--GCPAVFQIICRLPPGH-HQYKFYV 76 (426)
Q Consensus 19 ~~~~v~f~~~~---~~~~V~l~Gs---f~~W~~~--~~m~~~~--~~~~~~~~~~~L~~g~-y~ykFiV 76 (426)
..+.|+|+... .++.|+|+|+ +.+|++. ++|.+.+ .....|++++.||+|. +||||++
T Consensus 7 ~~v~V~F~v~~~~~~ge~v~vvGs~~~LG~W~p~~av~L~~~~~~~~~~~W~~~v~lp~~~~~eYKyvi 75 (131)
T 2z0b_A 7 GPSQVAFEIRGTLLPGEVFAICGSCDALGNWNPQNAVALLPENDTGESMLWKATIVLSRGVSVQYRYFK 75 (131)
T ss_dssp CCEEEEEEEECCCCTTCEEEEEESSGGGTTTCGGGCEECEECCTTCCSSEEEEEEEECTTCCEEEEEEE
T ss_pred CeEEEEEEEeeecCCCCEEEEEeCCCcCCCCCccccccccccccCCCCCeEEEEEEcCCCCcEEEEEEE
Confidence 56788888875 3799999999 8999974 5888762 1378999999999985 9999998
No 133
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.37 E-value=5e-07 Score=83.86 Aligned_cols=51 Identities=37% Similarity=0.509 Sum_probs=47.6
Q ss_pred CCeEEEcCCCCHHHHHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhc
Q 014342 349 RPFAMLRPTASLGSALALLVQADVSSIPIVDDNDSLLDIYSRSDITALAKD 399 (426)
Q Consensus 349 ~~v~tv~~~~~l~~a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~ 399 (426)
++++++.+++++.+|+++|.+++++++||+|++|+++|+||..||++.+..
T Consensus 15 ~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~~ 65 (245)
T 3l2b_A 15 DKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYMD 65 (245)
T ss_dssp BCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHHC
T ss_pred CCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 577889999999999999999999999999999999999999999987754
No 134
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.29 E-value=1.7e-06 Score=63.64 Aligned_cols=47 Identities=13% Similarity=0.189 Sum_probs=42.9
Q ss_pred cEEEEcCCccHHHHHHHHHHCCCCeeeeeeCCCCcEEEEeehHHHHHHH
Q 014342 166 KVTALDVNLAVKQAFHVLYEQGLPMVPLWDDFKGRFVGVLSALDFILIL 214 (426)
Q Consensus 166 ~vi~l~~~~sv~~A~~~l~~~~i~slPV~D~~~~~~vGilT~~Dli~~l 214 (426)
++++++++.++.+|++.|.++++.++||+|+ ++++|+||.+|++..+
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~--~~l~Givt~~dl~~~~ 47 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKV 47 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHH
Confidence 3678999999999999999999999999995 7999999999988755
No 135
>1ac0_A Glucoamylase; hydrolase, starch binding domain; HET: GLC BGC GLO; NMR {Aspergillus niger} SCOP: b.3.1.1 PDB: 1acz_A* 1kul_A 1kum_A
Probab=98.05 E-value=2.9e-06 Score=68.73 Aligned_cols=59 Identities=25% Similarity=0.485 Sum_probs=46.9
Q ss_pred CcceEEEEEecC---CCceEEEEecc---CCCCCC--CCCCCCCC--CCCeEEEEEecCCce-EEEEEEE
Q 014342 18 SILVPVRFIWPN---GGRRVSLSGSF---TRWSEP--MPMSPSEG--CPAVFQIICRLPPGH-HQYKFYV 76 (426)
Q Consensus 18 ~~~~~v~f~~~~---~~~~V~l~Gsf---~~W~~~--~~m~~~~~--~~~~~~~~~~L~~g~-y~ykFiV 76 (426)
+..+.++|+... .|+.|+|+|+. .+|++. ++|..... .++.|++++.||+|. +||||++
T Consensus 4 ~~~v~V~F~v~~~t~~Ge~v~vvGs~~~LG~W~~~~a~~l~~~~~~~~~~~W~~~v~lp~~~~~eYKy~v 73 (108)
T 1ac0_A 4 PTAVAVTFDLTATTTYGENIYLVGSISQLGDWETSDGIALSADKYTSSDPLWYVTVTLPAGESFEYKFIR 73 (108)
T ss_dssp CCCCCEEEEEECCCCSSCCEECCCSSSTTCSSSGGGSCCBBCSSSSSSCSSCEEEECCCSSSCEECCCEE
T ss_pred CCeEEEEEEEeeECCCCCEEEEEeCcHHHCCCCHHHCccccccccCCcCCeEEEEEEeCCCCeEEEEEEE
Confidence 345778888775 37999999986 489963 68987531 358999999999985 9999999
No 136
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=98.05 E-value=1.2e-05 Score=80.27 Aligned_cols=87 Identities=22% Similarity=0.294 Sum_probs=65.9
Q ss_pred cceEEEEEecCC-C-------ceEEEE--eccC---CCCCCCCCCCCCCCCCeEEEEEecCCceE-EEEEEEc-------
Q 014342 19 ILVPVRFIWPNG-G-------RRVSLS--GSFT---RWSEPMPMSPSEGCPAVFQIICRLPPGHH-QYKFYVD------- 77 (426)
Q Consensus 19 ~~~~v~f~~~~~-~-------~~V~l~--Gsf~---~W~~~~~m~~~~~~~~~~~~~~~L~~g~y-~ykFiVD------- 77 (426)
....|||.|.++ | ++|+|. |..+ +|.+ .+|.|.++ +|+|+.++.||++-| .|.|+||
T Consensus 29 ~~~~vtF~~~~p~a~~~~~~~~~V~~~~~~~~d~~~~~~~-~~m~r~~~-~~~W~~t~~l~~~~~~~Y~~~~~~~~~~~~ 106 (403)
T 3c8d_A 29 EMFEVTFWWRDPQGSEEYSTIKRVWVYITGVTDHHQNSQP-QSMQRIAG-TDVWQWTTQLNANWRGSYCFIPTERDDIFS 106 (403)
T ss_dssp SEEEEEEEEECTTCSTTTCCCCEEEEEETTTC-------C-CBCEECTT-SSEEEEEEEEETTCEEEEEEEEESCCSTTC
T ss_pred CcEEEEEEeeCCCcccccCccceEEEECcCCCccccccCc-cccccCCC-CCeEEEEEEECCCcEEEEEEEecCcccccc
Confidence 356899999986 5 789998 3333 2222 47988432 899999999999999 9999999
Q ss_pred -----------------CeeecCCCCCeeeCC-CCCeeeEEEeccCCCC
Q 014342 78 -----------------GEWRHDENQPHVSGN-YGVVNCVYIAVPQPDM 108 (426)
Q Consensus 78 -----------------g~w~~d~~~p~~~d~-~G~~nn~~~v~~~~~~ 108 (426)
|..+.||.||..... .|...|++++ ..+..
T Consensus 107 ~~~~~~~~~r~~w~~~~~~~~~DP~n~~~~~~~~~~~~s~~~~-p~~~~ 154 (403)
T 3c8d_A 107 APSPDRLELREGWRKLLPQAIADPLNPQSWKGGLGHAVSALEM-PQAPL 154 (403)
T ss_dssp CC--CHHHHHHHHHHHGGGCBCCTTCSSEECCSSSSCEEEEEC-TTCCC
T ss_pred cccchHHHHHHHHHHhhcccccCCCCCCCCCCCCCcccccccC-CCCCc
Confidence 778899999977643 4888899999 54433
No 137
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=97.41 E-value=0.00035 Score=73.61 Aligned_cols=68 Identities=25% Similarity=0.541 Sum_probs=52.4
Q ss_pred eEEEEE-ecCCCceEEEEeccCCCCC-CCCCCCCCCCCCeEEEEEe-cCCceEEEEEEE---cCee--ecCCCCCeee
Q 014342 21 VPVRFI-WPNGGRRVSLSGSFTRWSE-PMPMSPSEGCPAVFQIICR-LPPGHHQYKFYV---DGEW--RHDENQPHVS 90 (426)
Q Consensus 21 ~~v~f~-~~~~~~~V~l~Gsf~~W~~-~~~m~~~~~~~~~~~~~~~-L~~g~y~ykFiV---Dg~w--~~d~~~p~~~ 90 (426)
..++|+ |...|++|.|+|+|++|.. ..+|.+.. ..|+|++.++ +++|. .|+|.| ||.+ ..||......
T Consensus 25 ~gv~F~vwAP~A~~V~L~gdfn~~~~~~~~M~~~~-~~GvW~~~v~~~~~g~-~Y~f~i~~~~g~~~~~~DPya~~~~ 100 (617)
T 1m7x_A 25 TGTRFSVWAPNARRVSVVGQFNYWDGRRHPMRLRK-ESGIWELFIPGAHNGQ-LYKYEMIDANGNLRLKSDPYAFEAQ 100 (617)
T ss_dssp EEEEEEEECSSCSCEEEEEGGGTSCTTTCBCCCCT-TTTEEEEEEETCCTTC-EEEEEEECTTSCEEEECCTTCSSEE
T ss_pred CcEEEEEECCCCCEEEEEEEeCCCCCceeEeEECC-CCCEEEEEEcCCCCCC-EEEEEEEcCCCcEEEecCccceeec
Confidence 357786 6667999999999999975 46898632 3799999997 67787 499988 6764 6787776554
No 138
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=97.36 E-value=0.00025 Score=76.23 Aligned_cols=64 Identities=20% Similarity=0.459 Sum_probs=49.7
Q ss_pred EEEEE-ecCCCceEEEEeccCCCCCC-CCCCCCCCCCCeEEEEEe-------cCCceEEEEEEEc---Cee--ecCCCCC
Q 014342 22 PVRFI-WPNGGRRVSLSGSFTRWSEP-MPMSPSEGCPAVFQIICR-------LPPGHHQYKFYVD---GEW--RHDENQP 87 (426)
Q Consensus 22 ~v~f~-~~~~~~~V~l~Gsf~~W~~~-~~m~~~~~~~~~~~~~~~-------L~~g~y~ykFiVD---g~w--~~d~~~p 87 (426)
-++|+ |...|++|+|+|+||+|... .+|.+.+ .|+|++.++ +++|.+ |||.|+ |.| ..||-..
T Consensus 66 gv~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~~--~GvW~~~v~~~~g~~~i~~g~~-Y~y~i~~~~g~~~~~~dpya~ 142 (755)
T 3aml_A 66 ATIYREWAPAAQEAQLIGEFNNWNGAKHKMEKDK--FGIWSIKISHVNGKPAIPHNSK-VKFRFRHGGGAWVDRIPAWIR 142 (755)
T ss_dssp EEEEEEECTTCSEEEEEEGGGTTCCTTCBCEECT--TSEEEEEEECBTTBCSSCTTEE-EEEEEECTTCCCEEECCTTCS
T ss_pred eEEEEEECCCCCEEEEEEecCCCCCceeeceeCC--CCEEEEEEcccccccCCCCCCE-EEEEEECCCCcEEecCCcchh
Confidence 46776 77779999999999999864 7998753 799999998 788874 888886 455 3577555
Q ss_pred e
Q 014342 88 H 88 (426)
Q Consensus 88 ~ 88 (426)
.
T Consensus 143 ~ 143 (755)
T 3aml_A 143 Y 143 (755)
T ss_dssp C
T ss_pred e
Confidence 4
No 139
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=97.34 E-value=0.0003 Score=75.05 Aligned_cols=68 Identities=31% Similarity=0.500 Sum_probs=51.7
Q ss_pred eEEEEE-ecCCCceEEEEeccCCCCCC-CCCCCCCCCCCeEEEEEe-cCCceEEEEEEE---cCee--ecCCCCCeee
Q 014342 21 VPVRFI-WPNGGRRVSLSGSFTRWSEP-MPMSPSEGCPAVFQIICR-LPPGHHQYKFYV---DGEW--RHDENQPHVS 90 (426)
Q Consensus 21 ~~v~f~-~~~~~~~V~l~Gsf~~W~~~-~~m~~~~~~~~~~~~~~~-L~~g~y~ykFiV---Dg~w--~~d~~~p~~~ 90 (426)
.-++|+ |...|++|.|+|+||+|+.. .+|.+.. ..|+|++.++ +.+|. .|||.| ||.+ ..||-.....
T Consensus 136 ~g~~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~~-~~GvW~~~i~~~~~g~-~Y~y~i~~~~g~~~~~~DPya~~~~ 211 (722)
T 3k1d_A 136 SGVSFAVWAPNAKGVSLIGEFNGWNGHEAPMRVLG-PSGVWELFWPDFPCDG-LYKFRVHGADGVVTDRADPFAFGTE 211 (722)
T ss_dssp EEEEEEEECTTCSEEEEEEGGGTTCCCSCBCEECG-GGCEEEEEEETCCTTC-EEEEEEECTTSCEEEECCTTCSSBC
T ss_pred ceEEEEEECCCCCEEEEEeecCCCCCCcccCEEcC-CCCEEEEEeCCCCCCC-EEEEEEEcCCCcEEEeecccceeec
Confidence 346776 66779999999999999864 6898753 2599999987 78885 578887 5654 6787766543
No 140
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A
Probab=96.40 E-value=0.0094 Score=47.29 Aligned_cols=66 Identities=15% Similarity=0.296 Sum_probs=49.2
Q ss_pred eEEEEEecCCCceEEEEeccC--CCCCC--CCCCCCCCCCCeEEEEEecCCc-eEEEEEEEcC--eeecCCCCCe
Q 014342 21 VPVRFIWPNGGRRVSLSGSFT--RWSEP--MPMSPSEGCPAVFQIICRLPPG-HHQYKFYVDG--EWRHDENQPH 88 (426)
Q Consensus 21 ~~v~f~~~~~~~~V~l~Gsf~--~W~~~--~~m~~~~~~~~~~~~~~~L~~g-~y~ykFiVDg--~w~~d~~~p~ 88 (426)
..+++.|..+.++|+|-..+. +|+.. ++|.+.. .++.+..+++||.| .++|+|. || .|-.++..-+
T Consensus 5 ~~vtiyY~~g~~~vylHyg~~~g~Wt~~~~v~M~~~~-~~gw~~~TI~l~~g~~~~~~F~-dG~~~WDNn~g~Ny 77 (104)
T 2laa_A 5 NKVTIYYKKGFNSPYIHYRPAGGSWTAAPGVKMQDAE-ISGYAKITVDIGSASQLEAAFN-DGNNNWDSNNTKNY 77 (104)
T ss_dssp CEEEEEEECSSSSCEEEEEETTSCCCSSSCEECEEET-TTTEEEEEEECTTCSCEEEEEE-CSSSCEESTTTSCE
T ss_pred CEEEEEEcCCCCcEEEEEcCCCCCCCcCCcccccccc-CCCeEEEEEECCCCCEEEEEEe-CCCCcCcCCCCccE
Confidence 467778878899999999986 79974 4787653 24544699999976 6999995 87 4877665433
No 141
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=96.19 E-value=0.011 Score=62.81 Aligned_cols=58 Identities=22% Similarity=0.505 Sum_probs=47.1
Q ss_pred CCcceEEEEEecC-----CCceEEEEeccC---CCCC--------CC-CCCCCCCCCCeEEEEEecCCce-EEEEEEE
Q 014342 17 GSILVPVRFIWPN-----GGRRVSLSGSFT---RWSE--------PM-PMSPSEGCPAVFQIICRLPPGH-HQYKFYV 76 (426)
Q Consensus 17 ~~~~~~v~f~~~~-----~~~~V~l~Gsf~---~W~~--------~~-~m~~~~~~~~~~~~~~~L~~g~-y~ykFiV 76 (426)
....+.|+|+..+ .|++|+|+|+-. +|++ .+ +|...+ ...|++++.||+|. +||||++
T Consensus 578 ~~~~v~v~F~v~~~~t~~~G~~l~v~G~~~~LG~W~~~~~~~~~~a~~~l~~~~--~~~W~~~v~l~~~~~~eyKy~~ 653 (686)
T 1qho_A 578 SGTQTSVVFTVKSAPPTNLGDKIYLTGNIPELGNWSTDTSGAVNNAQGPLLAPN--YPDWFYVFSVPAGKTIQFKFFI 653 (686)
T ss_dssp SSSEEEEEEEEESCCCCCTTCEEEEEESSGGGTTTCCCCSSCSSCCBCCCBCTT--TTSEEEEEEEETTCEEEEEEEE
T ss_pred CCCeEEEEEEEecccCCCCCCEEEEEeChHHhCCCCCccccchhhhhcccccCC--CCcEEEEEEeCCCCeEEEEEEE
Confidence 3467888888865 478999999986 7998 34 777643 67999999999985 9999998
No 142
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=96.02 E-value=0.0042 Score=64.50 Aligned_cols=62 Identities=21% Similarity=0.227 Sum_probs=50.1
Q ss_pred EEEEE-ecCCCceEEEEeccCCCCCCCCCCCCCCCCCeEEEEEe-cCCceEEEEEEEcCe-eecCCCCCee
Q 014342 22 PVRFI-WPNGGRRVSLSGSFTRWSEPMPMSPSEGCPAVFQIICR-LPPGHHQYKFYVDGE-WRHDENQPHV 89 (426)
Q Consensus 22 ~v~f~-~~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~~~~~~~-L~~g~y~ykFiVDg~-w~~d~~~p~~ 89 (426)
-++|+ |...|++|.|++.|+ ..++|.+.+ +|+|++.++ +.+|. .|+|.|||. ...||.....
T Consensus 10 ~~~f~vwap~a~~v~l~~~~~---~~~~m~~~~--~g~w~~~~~~~~~g~-~Y~~~~~~~~~~~DP~~~~~ 74 (558)
T 3vgf_A 10 EVIFTLWAPYQKSVKLKVLEK---GLYEMERDE--KGYFTITLNNVKVRD-RYKYVLDDASEIPDPASRYQ 74 (558)
T ss_dssp EEEEEEECTTCSCCEEEETTT---EEEECEECT--TCEEEEEESSCCTTC-EEEEECTTSCEECCTTCSCC
T ss_pred cEEEEEECCCCCEEEEEEecC---ceeecccCC--CCEEEEEECCCCCCC-EEEEEEeCCccccCcchhhc
Confidence 46676 666799999999997 457998864 799999997 78885 699999996 7888876543
No 143
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=95.97 E-value=0.0052 Score=66.11 Aligned_cols=55 Identities=16% Similarity=0.281 Sum_probs=43.9
Q ss_pred EEEE-ecCCCceEEEEeccCCCCC-----CCCCCCCCCCCCeEEEEEe-cC------CceEEEEEEEcCee
Q 014342 23 VRFI-WPNGGRRVSLSGSFTRWSE-----PMPMSPSEGCPAVFQIICR-LP------PGHHQYKFYVDGEW 80 (426)
Q Consensus 23 v~f~-~~~~~~~V~l~Gsf~~W~~-----~~~m~~~~~~~~~~~~~~~-L~------~g~y~ykFiVDg~w 80 (426)
++|+ |...|++|.|++ |++|.. .++|.+.. .|+|++.++ +. +|.|.|+|.|+|.|
T Consensus 18 ~~F~vwap~A~~V~l~l-~~~~~~~~~~~~~~m~~~~--~gvW~~~v~~~~~~~~~~~g~y~Y~y~v~g~~ 85 (750)
T 1bf2_A 18 ITFRVYSSQATRIVLYL-YSAGYGVQESATYTLSPAG--SGVWAVTVPVSSIKAAGITGAVYYGYRAWGPN 85 (750)
T ss_dssp EEEEEECSSCSEEEEEE-ESSSSSCCCSEEEECEECS--TTEEEEEEEHHHHHHTTCCSCCEEEEEEEBTT
T ss_pred EEEEEECCCCCEEEEEE-EccCCCCccceEEecccCC--CCEEEEEECCcccccccCCCCEEEEEEEEeee
Confidence 6776 666799999999 987653 36787653 699999986 66 89999999999753
No 144
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=95.78 E-value=0.018 Score=61.26 Aligned_cols=59 Identities=25% Similarity=0.439 Sum_probs=47.0
Q ss_pred CcceEEEEEecC----CCceEEEEeccC---CCCCC--C-CCCCCC-CCCCeEEEEEecCCc-eEEEEEEE
Q 014342 18 SILVPVRFIWPN----GGRRVSLSGSFT---RWSEP--M-PMSPSE-GCPAVFQIICRLPPG-HHQYKFYV 76 (426)
Q Consensus 18 ~~~~~v~f~~~~----~~~~V~l~Gsf~---~W~~~--~-~m~~~~-~~~~~~~~~~~L~~g-~y~ykFiV 76 (426)
...++|+|+... .|+.|+|+|+-. +|++. + +|.... .....|++++.||+| .+||||++
T Consensus 577 ~~~v~v~f~v~~~~~~~ge~v~v~G~~~~LG~W~~~~a~~~l~~~~~~~~~~W~~~v~lp~~~~~eyK~v~ 647 (680)
T 1cyg_A 577 NDQVSVRFVVNNATTNLGQNIYIVGNVYELGNWDTSKAIGPMFNQVVYSYPTWYIDVSVPEGKTIEFKFIK 647 (680)
T ss_dssp SCEEEEEEEEESCCCCSSCEEEEEESSGGGBTTCGGGCBCCCBCSSSSCTTCEEEEEEEESSCEEEEEEEE
T ss_pred CCeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhccccCCCCCcEEEEEEeCCCCcEEEEEEE
Confidence 357889999865 389999999887 89974 5 677610 136799999999988 59999997
No 145
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=95.75 E-value=0.011 Score=62.75 Aligned_cols=54 Identities=20% Similarity=0.330 Sum_probs=42.7
Q ss_pred EEEEE-ecCCCceEEEEeccCCCC--CCCCCCCCCCCCCeEEEEEe-cCCceEEEEEEEcCe
Q 014342 22 PVRFI-WPNGGRRVSLSGSFTRWS--EPMPMSPSEGCPAVFQIICR-LPPGHHQYKFYVDGE 79 (426)
Q Consensus 22 ~v~f~-~~~~~~~V~l~Gsf~~W~--~~~~m~~~~~~~~~~~~~~~-L~~g~y~ykFiVDg~ 79 (426)
-++|+ |...|++|.|++ |+++. ..++|.+.. +|+|++.++ +.+|.+ |+|.|+|.
T Consensus 20 g~~F~vwap~A~~V~l~~-f~~~~~~~~~~m~~~~--~g~w~~~v~~~~~g~~-Y~y~v~~~ 77 (657)
T 2wsk_A 20 GVNFTLFSAHAERVELCV-FDANGQEHRYDLPGHS--GDIWHGYLPDARPGLR-YGYRVHGP 77 (657)
T ss_dssp EEEEEEECSSCSEEEEEE-ECTTCCEEEEECCEEE--TTEEEEEEETCCTTCE-EEEEEECC
T ss_pred eEEEEEECCCCCEEEEEE-ECCCCCEEEEeCcCCC--CCEEEEEECCCCCCCE-EEEEEeee
Confidence 47776 666799999999 98765 247898643 799999985 778876 99999983
No 146
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=95.71 E-value=0.0092 Score=62.31 Aligned_cols=60 Identities=12% Similarity=0.047 Sum_probs=46.4
Q ss_pred CcceEEEEE-ecCCCceEEE-EeccCCCCC----CCCCCCCC--CCCCeEEEEEecCCceEEEEEEEc
Q 014342 18 SILVPVRFI-WPNGGRRVSL-SGSFTRWSE----PMPMSPSE--GCPAVFQIICRLPPGHHQYKFYVD 77 (426)
Q Consensus 18 ~~~~~v~f~-~~~~~~~V~l-~Gsf~~W~~----~~~m~~~~--~~~~~~~~~~~L~~g~y~ykFiVD 77 (426)
...+.++|+ |.+.+++|.| +|+|++|+. ..+|.+.. +..|+|++.++.....+.|||.|.
T Consensus 20 ~~~~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~m~~~~~~~~~~~w~~~i~~~~~~~~Y~f~i~ 87 (585)
T 1wzl_A 20 ETQLRVRLRAKKGDVVRCEVLYADRYASPEEELAHALAGKAGSDERFDYFEALLECSTKRVKYVFLLT 87 (585)
T ss_dssp TTEEEEEEEEETTTCSEEEEEEECTTCCTTSCCEEEECEEEEECSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCEEEEEEEECCCCccEEEEEECCCcCCCCCceEEEEEEEeecCCCEEEEEEEEECCCCeEEEEEEEE
Confidence 456677775 6667999999 899999975 36898753 123579999998877899999985
No 147
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=95.69 E-value=0.029 Score=58.61 Aligned_cols=58 Identities=21% Similarity=0.308 Sum_probs=46.4
Q ss_pred cceEEEEEecC---CCceEEEEeccC---CCCCC--CCCCCCCC--CCCeEEEEEecCCce-EEEEEEE
Q 014342 19 ILVPVRFIWPN---GGRRVSLSGSFT---RWSEP--MPMSPSEG--CPAVFQIICRLPPGH-HQYKFYV 76 (426)
Q Consensus 19 ~~~~v~f~~~~---~~~~V~l~Gsf~---~W~~~--~~m~~~~~--~~~~~~~~~~L~~g~-y~ykFiV 76 (426)
..+.++|+..+ .|++|+|+|+-. +|++. ++|...+- ++..|+.++.||+|. +||||+|
T Consensus 495 ~~v~v~F~v~~~t~~Ge~l~vvGs~~~LG~W~~~~a~~L~~~~~t~~~~~W~~~v~lp~~~~~eYKyvv 563 (599)
T 2vn4_A 495 TSVAVTFHELVSTQFGQTVKVAGNAAALGNWSTSAAVALDAVNYADNHPLWIGTVNLEAGDVVEYKYIN 563 (599)
T ss_dssp SEEEEEEEEECCCCTTCEEEEEESSGGGTTTCTTTSEECBCTTCBTTBCEEEEEEEEETTCEEEEEEEE
T ss_pred CeEEEEEEEeEEcCCCCEEEEEecccCCCCcChhheeecccccCCCCCCcEEEEEEcCCCCcEEEEEEE
Confidence 45788898876 389999999886 89974 57886531 137999999999985 9999998
No 148
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=95.59 E-value=0.015 Score=62.20 Aligned_cols=55 Identities=18% Similarity=0.415 Sum_probs=42.8
Q ss_pred EEEEE-ecCCCceEEEEeccCCCCC-----CCCCCCCCCCCCeEEEEEe-cCCceEEEEEEEcCee
Q 014342 22 PVRFI-WPNGGRRVSLSGSFTRWSE-----PMPMSPSEGCPAVFQIICR-LPPGHHQYKFYVDGEW 80 (426)
Q Consensus 22 ~v~f~-~~~~~~~V~l~Gsf~~W~~-----~~~m~~~~~~~~~~~~~~~-L~~g~y~ykFiVDg~w 80 (426)
-+.|+ |...|++|.|++ |+++.. .++|.+.. .|+|.+.++ +.+|.+ |+|.|+|.|
T Consensus 30 g~~F~vwap~A~~V~l~l-f~~~~~~~~~~~~~m~~~~--~gvw~~~v~~~~~g~~-Y~y~v~g~~ 91 (718)
T 2vr5_A 30 GVNFSLFSENAEKVELLL-YSLTNQKYPKEIIEVKNKT--GDIWHVFVPGLRPGQL-YAYRVYGPY 91 (718)
T ss_dssp EEEEEEECSSCSEEEEEE-CCSSCCSSCSEEEEECEES--SSEEEEEEETCCTTCE-EEEEEECCE
T ss_pred eEEEEEECCCCCEEEEEE-EcCCCCCCcceEEeCccCC--CCEEEEEeCCCCCCCE-EEEEEeeec
Confidence 47786 666799999999 876442 36888653 799999985 788987 999999853
No 149
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=95.51 E-value=0.021 Score=60.78 Aligned_cols=59 Identities=27% Similarity=0.423 Sum_probs=47.2
Q ss_pred CcceEEEEEecC----CCceEEEEeccC---CCCCC--C-CCCCCC-CCCCeEEEEEecCCc-eEEEEEEE
Q 014342 18 SILVPVRFIWPN----GGRRVSLSGSFT---RWSEP--M-PMSPSE-GCPAVFQIICRLPPG-HHQYKFYV 76 (426)
Q Consensus 18 ~~~~~v~f~~~~----~~~~V~l~Gsf~---~W~~~--~-~m~~~~-~~~~~~~~~~~L~~g-~y~ykFiV 76 (426)
...++|+|+... .|+.|+|+||-. +|++. + +|.... .....|++++.||+| .+||||++
T Consensus 581 ~~~v~v~f~v~~~~~~~g~~v~v~G~~~~LG~W~~~~a~~~l~~~~~~~~~~W~~~v~lp~~~~~eyK~~~ 651 (683)
T 3bmv_A 581 GNQICVRFVVNNASTVYGENVYLTGNVAELGNWDTSKAIGPMFNQVVYQYPTWYYDVSVPAGTTIQFKFIK 651 (683)
T ss_dssp SSEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCGGGCBCSCBCSSSSCTTSEEEEEEEETTCEEEEEEEE
T ss_pred CCeEEEEEEEEeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccCCCCCCcEEEEEEeCCCCcEEEEEEE
Confidence 357889999865 389999999987 89963 5 777610 126799999999998 59999997
No 150
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=95.48 E-value=0.011 Score=61.83 Aligned_cols=62 Identities=21% Similarity=0.362 Sum_probs=49.3
Q ss_pred EEEEE-ecCCCceEEEEeccCCCCCCCCCCCCCCCCCeEEEEEecCCceEEEEEEEcCeeecCCCCCeee
Q 014342 22 PVRFI-WPNGGRRVSLSGSFTRWSEPMPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEWRHDENQPHVS 90 (426)
Q Consensus 22 ~v~f~-~~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~~~~~~~L~~g~y~ykFiVDg~w~~d~~~p~~~ 90 (426)
.++|+ |...|+.|.|+|+ + ..++|.+.+ .|+|++.+++.+|.+ |+|.|||..+.||......
T Consensus 35 ~~~f~vwap~a~~v~l~~~---~-~~~~m~~~~--~g~w~~~~~~~~g~~-Y~~~v~g~~~~DPya~~~~ 97 (602)
T 2bhu_A 35 GTRFRLWTSTARTVAVRVN---G-TEHVMTSLG--GGIYELELPVGPGAR-YLFVLDGVPTPDPYARFLP 97 (602)
T ss_dssp CEEEEEECSSCSSEEEEET---T-EEEECEEEE--TTEEEEEESCCTTCE-EEEEETTEEECCTTCSCCT
T ss_pred eEEEEEECCCCCEEEEEEc---C-CEEeCeeCC--CcEEEEEEECCCCcE-EEEEECCeEecCCCccccC
Confidence 57776 6667999999994 2 357898764 799999999888886 9999999777888776543
No 151
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=95.33 E-value=0.026 Score=60.03 Aligned_cols=59 Identities=29% Similarity=0.443 Sum_probs=46.8
Q ss_pred CcceEEEEEecC----CCceEEEEeccC---CCCCC--C-CCCCCC-CCCCeEEEEEecCCc-eEEEEEEE
Q 014342 18 SILVPVRFIWPN----GGRRVSLSGSFT---RWSEP--M-PMSPSE-GCPAVFQIICRLPPG-HHQYKFYV 76 (426)
Q Consensus 18 ~~~~~v~f~~~~----~~~~V~l~Gsf~---~W~~~--~-~m~~~~-~~~~~~~~~~~L~~g-~y~ykFiV 76 (426)
...++|+|+... .|+.|+|+||-. +|++. + +|.... .....|++++.||+| .+||||++
T Consensus 584 ~~~v~v~f~v~~~~~~~g~~~~v~G~~~~LG~W~~~~a~~~l~~~~~~~~~~W~~~v~lp~~~~~eyK~~~ 654 (686)
T 1d3c_A 584 GDQVSVRFVVNNATTALGQNVYLTGSVSELGNWDPAKAIGPMYNQVVYQYPNWYYDVSVPAGKTIEFKFLK 654 (686)
T ss_dssp SSEEEEEEEEECCCCCTTCEEEEEESSGGGTTTCGGGCBCCCBCSSSSCTTCEEEEEEEETTCEEEEEEEE
T ss_pred CCeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhccccCCCCCeEEEEEEeCCCCcEEEEEEE
Confidence 357889999865 389999999887 89974 5 676510 136799999999998 59999997
No 152
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=95.15 E-value=0.026 Score=57.90 Aligned_cols=60 Identities=17% Similarity=0.274 Sum_probs=46.6
Q ss_pred CCCcceEEEEEecC----CCceEEEEeccC---CCCCCC---CCCCCCCCCCeEEEEEecCCce-EEEEEEE
Q 014342 16 VGSILVPVRFIWPN----GGRRVSLSGSFT---RWSEPM---PMSPSEGCPAVFQIICRLPPGH-HQYKFYV 76 (426)
Q Consensus 16 ~~~~~~~v~f~~~~----~~~~V~l~Gsf~---~W~~~~---~m~~~~~~~~~~~~~~~L~~g~-y~ykFiV 76 (426)
-....+.++|+..+ .|++|+|+|+-. +|++.. +|.... .++.|++++.||+|. ++|||++
T Consensus 415 Vt~~~v~V~F~v~~~~t~~Ge~v~vvGs~~eLG~W~~~~a~~~l~~~~-~p~~W~~~v~lp~~~~~eYKyv~ 485 (516)
T 1vem_A 415 LGVTPVMQTIVVKNVPTTIGDTVYITGNRAELGSWDTKQYPIQLYYDS-HSNDWRGNVVLPAERNIEFKAFI 485 (516)
T ss_dssp TSCCEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCSSSSCEECEEET-TTTEEEEEEEEETTCCEEEEEEE
T ss_pred cccCccceEEEEeeccCCCCCEEEEEeChhhhCCCChhhhceecccCC-CCCEEEEEEEECCCCcEEEEEEE
Confidence 34567889999764 389999999886 799852 565522 245999999999985 9999998
No 153
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=95.14 E-value=0.011 Score=61.71 Aligned_cols=62 Identities=21% Similarity=0.245 Sum_probs=47.6
Q ss_pred CCCcceEEEEE-ecCCCceEEE-EeccCCCCC------CCCCCCCC--CCCCeEEEEEecCCceEEEEEEEc
Q 014342 16 VGSILVPVRFI-WPNGGRRVSL-SGSFTRWSE------PMPMSPSE--GCPAVFQIICRLPPGHHQYKFYVD 77 (426)
Q Consensus 16 ~~~~~~~v~f~-~~~~~~~V~l-~Gsf~~W~~------~~~m~~~~--~~~~~~~~~~~L~~g~y~ykFiVD 77 (426)
.....+.++|+ |.+.+++|.| +|+|++|+. ..+|.+.+ +..|+|++.++.....+.|+|.|.
T Consensus 18 ~~~~~~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~~~m~~~~~~~~~~~w~~~v~~~~~~~~Y~f~i~ 89 (588)
T 1j0h_A 18 YDSETLHLRLRTKKDDIDRVELLHGDPYDWQNGAWQFQMMPMRKTGSDELFDYWFAEVKPPYRRLRYGFVLY 89 (588)
T ss_dssp SSSSCEEEEEEEETTTCSEEEEEEECTTCEETTEECCEEEECEEEEECSSEEEEEEEECCTTSCEEEEEEEE
T ss_pred cCCCEEEEEEEECCCCccEEEEEECCCCCccccccceEEEEeEEeecCCCeEEEEEEEECCCcEEEEEEEEE
Confidence 34567788886 6667999999 799999965 46898753 124579999998777889999885
No 154
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=94.50 E-value=0.039 Score=58.98 Aligned_cols=65 Identities=22% Similarity=0.345 Sum_probs=47.8
Q ss_pred EEEEE-ecCCCceEEEEeccCCCCC-CCCCCCCCCCCCeEEEEEe-cCCceEEEEEEEc--Cee--ecCCCCCee
Q 014342 22 PVRFI-WPNGGRRVSLSGSFTRWSE-PMPMSPSEGCPAVFQIICR-LPPGHHQYKFYVD--GEW--RHDENQPHV 89 (426)
Q Consensus 22 ~v~f~-~~~~~~~V~l~Gsf~~W~~-~~~m~~~~~~~~~~~~~~~-L~~g~y~ykFiVD--g~w--~~d~~~p~~ 89 (426)
.++|+ |...|+.|.|++.|++|.. .++|.+.+ .|+|++.++ +.+|. .|+|.|+ |.| ..||.....
T Consensus 114 ~~~f~vwap~a~~V~l~~~~~~~~~~~~~m~~~~--~g~w~~~v~~~~~g~-~Y~f~v~~~g~~~~~~DPya~~~ 185 (718)
T 2e8y_A 114 HTVFKVWAPAATSAAVKLSHPNKSGRTFQMTRLE--KGVYAVTVTGDLHGY-EYLFCICNNSEWMETVDQYAKAV 185 (718)
T ss_dssp EEEEEEECTTCSEEEEEEECTTSCCEEEECEECG--GGEEEEEEESCCTTC-EEEEEEEETTEEEEECCTTCSSB
T ss_pred cEEEEEECCCCCEEEEEEEcCCCcceEEeCccCC--CCEEEEEECCCCCCC-eEEEEEEeCCeEEEecCCccccc
Confidence 46776 6667999999999998875 36898764 699999987 45563 5666664 764 578876543
No 155
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A*
Probab=93.83 E-value=0.057 Score=60.13 Aligned_cols=67 Identities=18% Similarity=0.198 Sum_probs=49.0
Q ss_pred EEEEE-ecCCCceEEEEe-ccCCCCC-CCCCCCCCCCCCeEEEEEe-cCCceEEEEEEEc------C----eeecCCCCC
Q 014342 22 PVRFI-WPNGGRRVSLSG-SFTRWSE-PMPMSPSEGCPAVFQIICR-LPPGHHQYKFYVD------G----EWRHDENQP 87 (426)
Q Consensus 22 ~v~f~-~~~~~~~V~l~G-sf~~W~~-~~~m~~~~~~~~~~~~~~~-L~~g~y~ykFiVD------g----~w~~d~~~p 87 (426)
-+.|+ |...|++|.|++ +|++|.. .++|.+.. ..|+|++.++ +.+|.+ |+|.|+ | ....||...
T Consensus 305 gv~F~vwAP~A~~V~L~l~d~~~~~~~~~~m~~~~-~~GvW~~~v~~~~~G~~-Y~y~v~~~~p~~g~~~~~~~~DPYa~ 382 (1083)
T 2fhf_A 305 GVTFRVWAPTAQQVELVIYSADKKVIASHPMTRDS-ASGAWSWQGGSDLKGAF-YRYAMTVYHPQSRKVEQYEVTDPYAH 382 (1083)
T ss_dssp EEEEEEECTTCSEEEEEEECTTCCEEEEEECEECT-TTCEEEEEECGGGTTCE-EEEEEEEEETTTTEEEEEEECCTTCS
T ss_pred eEEEEEECCCCCEEEEEEEcCCCCccceEECeECC-CCCEEEEEECCCCCCCE-EEEEEEeecCCCCccccceecCCccc
Confidence 36777 677799999999 9999975 46898543 3699999985 677865 777775 3 246777765
Q ss_pred eee
Q 014342 88 HVS 90 (426)
Q Consensus 88 ~~~ 90 (426)
...
T Consensus 383 ~~~ 385 (1083)
T 2fhf_A 383 SLS 385 (1083)
T ss_dssp CBC
T ss_pred eec
Confidence 544
No 156
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=93.03 E-value=0.048 Score=59.39 Aligned_cols=65 Identities=15% Similarity=0.197 Sum_probs=48.8
Q ss_pred EEEE-ecCCCceEEEEe-ccCCCCC---CCCCCCCCCCCCeEEEEEecCCce-----EEEEEEEcC--e--eecCCCCCe
Q 014342 23 VRFI-WPNGGRRVSLSG-SFTRWSE---PMPMSPSEGCPAVFQIICRLPPGH-----HQYKFYVDG--E--WRHDENQPH 88 (426)
Q Consensus 23 v~f~-~~~~~~~V~l~G-sf~~W~~---~~~m~~~~~~~~~~~~~~~L~~g~-----y~ykFiVDg--~--w~~d~~~p~ 88 (426)
+.|+ |...|++|.|++ ++++|.. .++|.+.. +|+|++.+.+.||. +.|+|.|++ . ...||....
T Consensus 146 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~~--~gvW~~~v~~~~G~~~~~g~~Y~yrv~~~~~~~~~~DPYA~~ 223 (877)
T 3faw_A 146 VEASLWSPSADSVTMIIYDKDNQNRVVATTPLVKNN--KGVWQTILDTKLGIKNYTGYYYLYEIKRGKDKVKILDPYAKS 223 (877)
T ss_dssp EEEEEECTTCSEEEEEEEETTEEEEEEEEEECEECT--TSEEEEEECGGGTCSCCTTCEEEEEEEETTEEEEECCTTCSC
T ss_pred EEEEEECCCCCEEEEEEEeCCCCccceeeeccccCC--CCEEEEEECCCCCCccCCCeEEEEEEeeCCceeEecCcccee
Confidence 6777 666799999998 7888853 47898753 79999999776762 678888863 3 578887754
Q ss_pred e
Q 014342 89 V 89 (426)
Q Consensus 89 ~ 89 (426)
+
T Consensus 224 ~ 224 (877)
T 3faw_A 224 L 224 (877)
T ss_dssp B
T ss_pred c
Confidence 4
No 157
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=92.75 E-value=0.12 Score=55.03 Aligned_cols=65 Identities=14% Similarity=0.264 Sum_probs=47.7
Q ss_pred EEEE-ecCCCceEEEEe-ccCCCCC---CCCCCCCCCCCCeEEEEEecC--Cc-----eEEEEEEEc--Ce--eecCCCC
Q 014342 23 VRFI-WPNGGRRVSLSG-SFTRWSE---PMPMSPSEGCPAVFQIICRLP--PG-----HHQYKFYVD--GE--WRHDENQ 86 (426)
Q Consensus 23 v~f~-~~~~~~~V~l~G-sf~~W~~---~~~m~~~~~~~~~~~~~~~L~--~g-----~y~ykFiVD--g~--w~~d~~~ 86 (426)
+.|+ |...|++|.|++ +|++|.. .++|.+.. .|+|++.++-. +| -+.|+|.|+ |. ...||..
T Consensus 26 v~F~vwap~A~~V~l~l~~~~~~~~~~~~~~m~~~~--~gvW~~~v~~~~~~g~~~~~g~~Y~y~v~~~~~~~~~~DPya 103 (714)
T 2ya0_A 26 VDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKGE--RGTWKQTLDSTNKLGITDFTGYYYQYQIERQGKTVLALDPYA 103 (714)
T ss_dssp EEEEEECTTCSEEEEEEECSSCTTSEEEEEECEECG--GGEEEEEECTTCSSSCSCCTTCEEEEEEEETTEEEEECCTTC
T ss_pred EEEEEECCCCCEEEEEEEeCCCCCccceEEeCccCC--CCEEEEEECCccCCCccccCCcEEEEEEEeCCceEEecCCce
Confidence 6776 777799999999 8988864 47898743 69999998741 34 267888886 53 4678876
Q ss_pred Cee
Q 014342 87 PHV 89 (426)
Q Consensus 87 p~~ 89 (426)
..+
T Consensus 104 ~~~ 106 (714)
T 2ya0_A 104 KSL 106 (714)
T ss_dssp SEE
T ss_pred eee
Confidence 543
No 158
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=92.61 E-value=0.022 Score=58.68 Aligned_cols=58 Identities=22% Similarity=0.415 Sum_probs=0.0
Q ss_pred CcceEEEEEe-cC---CCceEEEEeccC---CCCCC--CCCCCCCCCCCeEEEEEecCCc-eEEEEEEE
Q 014342 18 SILVPVRFIW-PN---GGRRVSLSGSFT---RWSEP--MPMSPSEGCPAVFQIICRLPPG-HHQYKFYV 76 (426)
Q Consensus 18 ~~~~~v~f~~-~~---~~~~V~l~Gsf~---~W~~~--~~m~~~~~~~~~~~~~~~L~~g-~y~ykFiV 76 (426)
...++|+|+. .+ .|++|+|+||-. +|++. ++|.... ....|++++.||+| .+||||+|
T Consensus 428 ~~~v~v~F~v~~~~t~~G~~v~v~G~~~~LG~W~~~~a~~l~~~~-~~~~W~~~v~lp~~~~~eyKy~~ 495 (527)
T 1gcy_A 428 GALVSVSFRCDNGATQMGDSVYAVGNVSQLGNWSPAAALRLTDTS-GYPTWKGSIALPAGQNEEWKCLI 495 (527)
T ss_dssp ---------------------------------------------------------------------
T ss_pred CCEEEEEEEEecccCCCCCeEEEEcChhHhCCCCcccCccCccCC-CCCeEEEEEEeCCCCcEEEEEEE
Confidence 3468889987 33 389999999987 79973 6887321 25789999999998 49999997
No 159
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=92.35 E-value=0.09 Score=57.29 Aligned_cols=53 Identities=15% Similarity=0.090 Sum_probs=37.9
Q ss_pred EEEE-ecCCCceEEEEeccCCCCCCC--CCCCCCCCCCeEEEEEe-cCCceEEEEEEEcC
Q 014342 23 VRFI-WPNGGRRVSLSGSFTRWSEPM--PMSPSEGCPAVFQIICR-LPPGHHQYKFYVDG 78 (426)
Q Consensus 23 v~f~-~~~~~~~V~l~Gsf~~W~~~~--~m~~~~~~~~~~~~~~~-L~~g~y~ykFiVDg 78 (426)
|+|+ |...|++|.|++-+++|.+.. .|.+. .+|+|++.++ +.+|. .|+|.|+|
T Consensus 138 ~~F~vwAp~A~~V~l~l~~~~~~~~~~~~~~~~--~~g~W~~~~~~~~~g~-~Y~y~v~~ 194 (884)
T 4aio_A 138 VSLHLWAPTAQGVSVCFFDGPAGPALETVQLKE--SNGVWSVTGPREWENR-YYLYEVDV 194 (884)
T ss_dssp EEEEEECTTCSEEEEEEESTTTSCEEEEEECEE--ETTEEEEEEEGGGTTC-EEEEEEEE
T ss_pred EEEEEECCCCCEEEEEEEeCCCCCeeeeeeecC--CCCEEEEEECCCCCCC-EEEEEEeC
Confidence 6787 777799999999666665532 23332 3799999986 56665 48888865
No 160
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=92.14 E-value=0.026 Score=58.83 Aligned_cols=61 Identities=16% Similarity=0.206 Sum_probs=45.6
Q ss_pred CCcceEEEEE-ecCCCceEEE-EeccCCCCC---CCCCCCCCC--CCCeEEEEEecCCceEEEEEEEc
Q 014342 17 GSILVPVRFI-WPNGGRRVSL-SGSFTRWSE---PMPMSPSEG--CPAVFQIICRLPPGHHQYKFYVD 77 (426)
Q Consensus 17 ~~~~~~v~f~-~~~~~~~V~l-~Gsf~~W~~---~~~m~~~~~--~~~~~~~~~~L~~g~y~ykFiVD 77 (426)
....+.++|+ |.+.+++|.| +|+|++|.. ..+|.+... ..|+|++.++.....+.|||.|.
T Consensus 19 ~~~~~~~~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~M~~~~~~~~~~~w~~~i~~~~~~~~Y~f~i~ 86 (583)
T 1ea9_C 19 NGTTVHLRIRTKKDDMTAVYALAGDKYMWDHTMEYVPMTKLATDELFDYWECEVTPPYRRVKYGFLLQ 86 (583)
T ss_dssp SSSCEECCCEECTTCCSBEEEEEECSSSCTTTCEEEEECEEEECSSCEEECCEECCTTSCEEECBCCE
T ss_pred CCCEEEEEEEECCCCccEEEEEECCCcCCCCcEEEEEEEEEeccCCeEEEEEEEECCCceEEEEEEEE
Confidence 3456667765 6667999999 799999975 368987431 24579999988777788888873
No 161
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=92.05 E-value=0.11 Score=56.95 Aligned_cols=63 Identities=16% Similarity=0.244 Sum_probs=45.3
Q ss_pred EEEEE-ecCCCceEEEEeccCCCC----CCCCCCCCCCCCCeEEEEEe-cCCceEEEEEEE--cCe--eecCCCCCe
Q 014342 22 PVRFI-WPNGGRRVSLSGSFTRWS----EPMPMSPSEGCPAVFQIICR-LPPGHHQYKFYV--DGE--WRHDENQPH 88 (426)
Q Consensus 22 ~v~f~-~~~~~~~V~l~Gsf~~W~----~~~~m~~~~~~~~~~~~~~~-L~~g~y~ykFiV--Dg~--w~~d~~~p~ 88 (426)
-++|+ |...|+.|.|++ |++|. ..++|.+.+ .|+|++.++ +.+|. .|+|.| +|. ...||....
T Consensus 326 gv~F~vwaP~A~~V~l~l-f~~~~~~~~~~~~m~~~~--~gvW~~~v~~~~~g~-~Y~y~v~~~g~~~~~~DPya~~ 398 (921)
T 2wan_A 326 ATSFRVWAPTASNVQLLL-YNSEKGSITKQLEMQKSD--NGTWKLQVSGNLENW-YYLYQVTVNGTTQTAVDPYARA 398 (921)
T ss_dssp EEEEEEECTTCSEEEEEE-ESSSSSCCSEEEECEECG--GGEEEEEEESCCTTC-EEEEEEECSSCEEEECCTTCSS
T ss_pred eEEEEEECCCCCEEEEEE-EeCCCCCcCeEEeCeeCC--CCEEEEEEccCCCCC-EEEEEEEeCCeEEEecCCccee
Confidence 46676 566699999997 99995 247898754 699999987 45665 366666 564 467776654
No 162
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=91.67 E-value=0.2 Score=52.49 Aligned_cols=62 Identities=24% Similarity=0.405 Sum_probs=46.9
Q ss_pred EEEEE-ecCCCceEEEEeccCCCCCCCCCCCCCCCCCeEEEEE-ecCCceEEEEEEEc-CeeecCCCCCeee
Q 014342 22 PVRFI-WPNGGRRVSLSGSFTRWSEPMPMSPSEGCPAVFQIIC-RLPPGHHQYKFYVD-GEWRHDENQPHVS 90 (426)
Q Consensus 22 ~v~f~-~~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~~~~~~-~L~~g~y~ykFiVD-g~w~~d~~~p~~~ 90 (426)
-++|+ |...|++|.|++ +|.. .+|.+.+ +|+|.+.+ .+.+|. .|+|.|+ |..+.||......
T Consensus 43 ~~~F~vwap~a~~v~l~~---~~~~-~~m~~~~--~g~~~~~~~~~~~g~-~Y~y~v~~~~~~~DP~a~~~~ 107 (618)
T 3m07_A 43 VVRFRLWATGQQKVMLRL---AGKD-QEMQANG--DGWFTLDVAGVTPGT-EYNFVLSDGMVVPDPASRAQK 107 (618)
T ss_dssp EEEEEEECTTCSCEEEEE---TTEE-EECEECS--TTEEEEEEETCCTTC-EEEEEETTSCEECCTTCSCBS
T ss_pred cEEEEEECCCCCEEEEEE---CCCc-ccCeecC--CEEEEEEeCCCCCCC-EEEEEEeCCeEeccccceeee
Confidence 36777 666799999998 3543 7898864 68999988 477786 5889995 5688898876554
No 163
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=91.10 E-value=0.3 Score=53.63 Aligned_cols=60 Identities=27% Similarity=0.484 Sum_probs=42.9
Q ss_pred ceEEEEEecCCCceEEEEecc-------CCCCCCC---CCCCCCCCCCeEEEEEecCCceEEEEEEEcCeee
Q 014342 20 LVPVRFIWPNGGRRVSLSGSF-------TRWSEPM---PMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEWR 81 (426)
Q Consensus 20 ~~~v~f~~~~~~~~V~l~Gsf-------~~W~~~~---~m~~~~~~~~~~~~~~~L~~g~y~ykFiVDg~w~ 81 (426)
+++|..--...+..+.+.|+| .+|++.. -|.+. .+|.|+.+-.||+|.|+||+.++|.|.
T Consensus 152 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~w~p~~~~~~~~~~--~~~~y~~~~~l~~g~y~~kv~~~~~w~ 221 (921)
T 2wan_A 152 KIPVTSAVSANPVTAVLVGDLQQALGAANNWSPDDDHTLLKKI--NPNLYQLSGTLPAGTYQYKIALDHSWN 221 (921)
T ss_dssp EECEEEEEECCCCCEEEEETTSGGGTCSSSSCTTCGGGBCEEE--ETTEEEEEEEECSEEEEEEEEETTSSS
T ss_pred cccccccccccccccccccchhhhccccccCCCCCCcceeecc--CCcceeeeeccCCcceeEEEeecCccc
Confidence 444433333345568888877 5799864 24332 278999999999999999999998774
No 164
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=88.95 E-value=0.31 Score=53.99 Aligned_cols=64 Identities=13% Similarity=0.225 Sum_probs=45.9
Q ss_pred EEEE-ecCCCceEEEEe-ccCCCCC---CCCCCCCCCCCCeEEEEEecC--Cc-----eEEEEEEEc--Ce--eecCCCC
Q 014342 23 VRFI-WPNGGRRVSLSG-SFTRWSE---PMPMSPSEGCPAVFQIICRLP--PG-----HHQYKFYVD--GE--WRHDENQ 86 (426)
Q Consensus 23 v~f~-~~~~~~~V~l~G-sf~~W~~---~~~m~~~~~~~~~~~~~~~L~--~g-----~y~ykFiVD--g~--w~~d~~~ 86 (426)
+.|+ |...|+.|.|++ +|++|.. .++|.+. ..|+|++.++-. +| -+.|+|.|+ |. ...||..
T Consensus 333 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~--~~gvW~~~v~~~~~~g~~~~~G~~Y~y~i~~~~~~~~~~DPYa 410 (1014)
T 2ya1_A 333 VDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKG--ERGTWKQTLDSTNKLGITDFTGYYYQYQIERQGKTVLALDPYA 410 (1014)
T ss_dssp EEEEEECTTCSEEEEEEECSSCTTSEEEEEECEEC--GGGEEEEEECTTCSSCCSCCTTCEEEEEEEETTEEEEECCTTC
T ss_pred EEEEEECCCCCEEEEEEEECCCCCccceEEecccC--CCCEEEEEEcccccCCccccCCcEEEEEEEeCCeEEEecCccc
Confidence 6776 666799999999 8998864 4789874 379999998742 23 256777775 53 4678765
Q ss_pred Ce
Q 014342 87 PH 88 (426)
Q Consensus 87 p~ 88 (426)
..
T Consensus 411 ~~ 412 (1014)
T 2ya1_A 411 KS 412 (1014)
T ss_dssp SS
T ss_pred ee
Confidence 43
No 165
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=88.80 E-value=0.34 Score=43.73 Aligned_cols=50 Identities=16% Similarity=0.169 Sum_probs=40.1
Q ss_pred CceEEEEeccCCCCCC--CCCCCCCCCCCeEEEEEecCCceEEEEEEEcCeee
Q 014342 31 GRRVSLSGSFTRWSEP--MPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEWR 81 (426)
Q Consensus 31 ~~~V~l~Gsf~~W~~~--~~m~~~~~~~~~~~~~~~L~~g~y~ykFiVDg~w~ 81 (426)
.+++|++|++++|... .+|.+....+|.|...+.|+.|. +|||.-+..|-
T Consensus 12 p~~lY~vG~~~gW~~~~~~~m~~~~~~~g~y~~~~yl~ag~-~fKf~~~~~~~ 63 (221)
T 4fch_A 12 PKTMFIVGSMLDTDWKVWKPMAGVYGMDGQFYSMIYFDANS-EFKFGTKENEY 63 (221)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECTTCTTEEEEEEEECTTE-EEEEESSTTCC
T ss_pred cceEEEEecCCCCCCCccceeeeccCCCceEEEEEEEcCCC-eEEEeeccCcc
Confidence 6789999999988743 57877665689999999998775 89999776553
No 166
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=88.16 E-value=0.4 Score=50.31 Aligned_cols=56 Identities=13% Similarity=0.146 Sum_probs=40.7
Q ss_pred EEEEE-e----cCCCceEEEEeccCCCCC-CCCCCC--CC--CCCCeEEEEEecCCceEEEEEEEcC
Q 014342 22 PVRFI-W----PNGGRRVSLSGSFTRWSE-PMPMSP--SE--GCPAVFQIICRLPPGHHQYKFYVDG 78 (426)
Q Consensus 22 ~v~f~-~----~~~~~~V~l~Gsf~~W~~-~~~m~~--~~--~~~~~~~~~~~L~~g~y~ykFiVDg 78 (426)
.|+|+ | ...+++|.|++.|++ .. .++|.+ .. +..|+|++.++.......|+|.|+|
T Consensus 31 ~v~f~v~~~~~ap~a~~V~l~~~~~~-~~~~~~m~~~~~~~~~~~~~w~~~i~~~~~g~~Y~f~i~~ 96 (637)
T 1ji1_A 31 SVTLKLRTFKGDITSANIKYWDTADN-AFHWVPMVWDSNDPTGTFDYWKGTIPASPSIKYYRFQIND 96 (637)
T ss_dssp CEEEEEEEETTCCSEEEEEEEETTTT-EEEEEECEEEEECTTSSEEEEEEEECCCSSCEEEEEEEEE
T ss_pred EEEEEEEEecCcCCeeEEEEEEecCC-CEEEEEeEEeeccccCCeeEEEEEEECCCceEEEEEEEEE
Confidence 46676 5 345899999999874 32 368987 32 1347999999876666789999975
No 167
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=86.95 E-value=1.2 Score=34.90 Aligned_cols=63 Identities=16% Similarity=0.448 Sum_probs=43.0
Q ss_pred EEEEEecCCCceEEEEeccC--CCCCC--CCCCCCCCCCCeEEEEEecCCc-eEEEEEEEcC--eeecCCCC
Q 014342 22 PVRFIWPNGGRRVSLSGSFT--RWSEP--MPMSPSEGCPAVFQIICRLPPG-HHQYKFYVDG--EWRHDENQ 86 (426)
Q Consensus 22 ~v~f~~~~~~~~V~l~Gsf~--~W~~~--~~m~~~~~~~~~~~~~~~L~~g-~y~ykFiVDg--~w~~d~~~ 86 (426)
.+++.|..+...|+|==.+. +|... ++|.+.. +.|.|..+|.|+.+ .++|+| -|| .|-.+...
T Consensus 11 ~vTvyY~sg~~~~ylHy~~~~g~Wt~vpgv~M~~~~-~~Gw~~~TI~~~~~~~l~~~F-~dG~~~WDNN~g~ 80 (102)
T 2c3v_A 11 DITIYYKTGWTHPHIHYSLNQGAWTTLPGVPLTKSE-XEGXVKVTIEAEEGSQLRAAF-NNGSGQWDNNQGR 80 (102)
T ss_dssp SEEEEEECCCSSCEEEEEETTCCBCCTTCEECEECS-STTEEEEEECCCTTCEEEEEE-ECSSSCEECGGGT
T ss_pred EEEEEEcCCCCcEEEEEeCCCCCcccCCCcCccccc-cCCceEEEEecCCCceEEEEE-eCCCcccccCCCc
Confidence 34444546678888765565 48763 5787642 47889999999975 799999 555 58665443
No 168
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=64.23 E-value=6.1 Score=39.50 Aligned_cols=47 Identities=13% Similarity=0.285 Sum_probs=36.1
Q ss_pred CceEEEEeccCCCCCC--CCCCCCCCCCCeEEEEEecCCceEEEEEEEcC
Q 014342 31 GRRVSLSGSFTRWSEP--MPMSPSEGCPAVFQIICRLPPGHHQYKFYVDG 78 (426)
Q Consensus 31 ~~~V~l~Gsf~~W~~~--~~m~~~~~~~~~~~~~~~L~~g~y~ykFiVDg 78 (426)
....||+|++++|... .+|.+....++.|.....+..+. +|||.-..
T Consensus 150 ~~~~YlvG~~~gW~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~fK~~~~~ 198 (470)
T 4fe9_A 150 PDGYYIVGDFTGWDGNSAQQMKKDALDENLYILEAEIESTS-NFKIFPAS 198 (470)
T ss_dssp TTCEEEEETTTCSSGGGCEECEECSSCTTEEEEEEEESSCC-EEEEEEGG
T ss_pred cceeEEEcccCCCCcccCeeeeeecCCCceEEEEEEeccCc-eEEEeecc
Confidence 3568999999999864 45666555578999999987766 79999643
No 169
>2djm_A Glucoamylase A; beta sandwich, anti-parallel, strach binding, carbohydrate binding, sugar binding protein; NMR {Rhizopus oryzae} PDB: 2v8l_A* 2v8m_A* 2vq4_A
Probab=56.30 E-value=23 Score=27.76 Aligned_cols=59 Identities=14% Similarity=0.125 Sum_probs=38.2
Q ss_pred eEEEEEecCC--CceEEEEec--cCCCCC-CC--CCCCC----CCCCCeEEEEEecCCc-eEEEEEEEcCe
Q 014342 21 VPVRFIWPNG--GRRVSLSGS--FTRWSE-PM--PMSPS----EGCPAVFQIICRLPPG-HHQYKFYVDGE 79 (426)
Q Consensus 21 ~~v~f~~~~~--~~~V~l~Gs--f~~W~~-~~--~m~~~----~~~~~~~~~~~~L~~g-~y~ykFiVDg~ 79 (426)
+.-+++-..- .|.|.|-=+ |++|+. .. +.... ...-..|...+.||+. .+--+|.++|.
T Consensus 21 l~GtV~V~NlafeK~V~VR~T~~~D~W~t~~~dv~a~y~~~~~~~~~D~F~F~i~l~~~~eFcIrY~v~g~ 91 (106)
T 2djm_A 21 FSGKIYVKNIAYSKKVTVVYADGSDNWNNNGNIIAASFSGPISGSNYEYWTFSASVKGIKEFYIKYEVSGK 91 (106)
T ss_dssp EEEEEEECCSSSCEEEEEEEEETTSSCSSCCCEEECEEEEECTTSSCEEEEEEECCSSEEEEEEEEEESSC
T ss_pred EEEEEEEeecCcCcEEEEEECCCcCCCccccEEEEEEEecCCCCCCeEEEEEEEECCCCeEEEEEEEECCc
Confidence 3444444442 477887777 999998 32 11111 1124589999999875 47778999996
No 170
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=54.99 E-value=19 Score=26.54 Aligned_cols=30 Identities=20% Similarity=0.392 Sum_probs=25.4
Q ss_pred CcEeeEEcCCCcEEEEEeHHHHHHHHhccc
Q 014342 372 VSSIPIVDDNDSLLDIYSRSDITALAKDKA 401 (426)
Q Consensus 372 i~~lPVVd~~g~lvGiis~~DI~~~~~~~~ 401 (426)
...+=|||++|+-+|+++..+-++++.+.-
T Consensus 13 ~~eVrli~~~Ge~lGv~~~~eAl~~A~e~~ 42 (78)
T 1tif_A 13 AREVRLIDQNGDQLGIKSKQEALEIAARRN 42 (78)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHHHHHHHTT
T ss_pred CCEEEEECCCCcCCCcccHHHHHHHHHHcC
Confidence 345779999999999999999999887753
No 171
>2eef_A Protein phosphatase 1, regulatory (inhibitor) subunit 3B; CBM_21 domain, carbohydrate binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.37 E-value=14 Score=31.15 Aligned_cols=60 Identities=15% Similarity=0.229 Sum_probs=40.7
Q ss_pred ceEEEEEecC--CCceEEEEeccCCCCCC--CCCCCCCC-----CCCeEEEEEecCC-----c--eEEEEEEEcCe
Q 014342 20 LVPVRFIWPN--GGRRVSLSGSFTRWSEP--MPMSPSEG-----CPAVFQIICRLPP-----G--HHQYKFYVDGE 79 (426)
Q Consensus 20 ~~~v~f~~~~--~~~~V~l~Gsf~~W~~~--~~m~~~~~-----~~~~~~~~~~L~~-----g--~y~ykFiVDg~ 79 (426)
.+.-+++-.. -.+.|.|-=+|++|+.. +++.+... ....|...+.||+ + .+-.+|.++|.
T Consensus 47 ~l~GtV~V~NlafeK~V~VR~T~D~Wkt~~dv~a~y~~~~~~~~~~D~F~F~I~lp~~~~~~~~leFcIrY~v~g~ 122 (156)
T 2eef_A 47 AIAGTVKVQNLAFEKTVKIRMTFDTWKSYTDFPCQYVKDTYAGSDRDTFSFDISLPEKIQSYERMEFAVYYECNGQ 122 (156)
T ss_dssp EEEEEEEECCSSSCCEEEEEEESSTTSSEEEEECEECCCSSSCSSSCEEEECCCCCSCCCTTSCCEEEEEEEETTE
T ss_pred EEEEEEEEeccCCCcEEEEEEeECCCcccEEEEEEEccccCCCCCceEEEEEEECCCccCCCcEEEEEEEEEeCCC
Confidence 3444555554 36899999999999964 24443321 2358999999986 3 36678889986
No 172
>4fem_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: ACX; 2.50A {Bacteroides thetaiotaomicron}
Probab=49.08 E-value=15 Score=35.10 Aligned_cols=50 Identities=16% Similarity=0.169 Sum_probs=38.0
Q ss_pred CceEEEEeccCCCCCC--CCCCCCCCCCCeEEEEEecCCceEEEEEEEcCeee
Q 014342 31 GRRVSLSGSFTRWSEP--MPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEWR 81 (426)
Q Consensus 31 ~~~V~l~Gsf~~W~~~--~~m~~~~~~~~~~~~~~~L~~g~y~ykFiVDg~w~ 81 (426)
.+..+|+|++.+|... .+|.+....+|.|.....|+.| .+|||.-+..|-
T Consensus 149 p~~lYlvG~~~~~~w~~~~~l~~~~~~~g~y~~~~yl~~~-~~fKf~~~~~~~ 200 (358)
T 4fem_A 149 PKTMFIVGSMLDTDWKVWKPMAGVYGMDGQFYSMIYFDAN-SEFKFGTKENEY 200 (358)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECTTSTTEEEEEEEECTT-EEEEEESSTTCC
T ss_pred cceEEEeccccCCCCcccceeeeccCCCceEEEEEEecCC-ceEEeccccCCc
Confidence 4679999999876543 4677665558999999999876 578998776554
No 173
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=43.89 E-value=24 Score=35.14 Aligned_cols=54 Identities=24% Similarity=0.460 Sum_probs=38.0
Q ss_pred CceEEEEeccCCCCCC-------CCCCCCCCCCCeEEEEEecCCceEEEEEEEcCeeecCCC
Q 014342 31 GRRVSLSGSFTRWSEP-------MPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEWRHDEN 85 (426)
Q Consensus 31 ~~~V~l~Gsf~~W~~~-------~~m~~~~~~~~~~~~~~~L~~g~y~ykFiVDg~w~~d~~ 85 (426)
...++++|++++|... .+|.+.....+.|...+.+..+ .+|||.-++.|-.+-.
T Consensus 260 ~~~lyivG~~~~wg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-gefKF~~~~~W~~~~G 320 (470)
T 4fe9_A 260 PTELYMTGSAYNWGTPAGDPNAWKALVPVNGTKGTFWGIFYFAAN-DQVKFAPQANWGNDFG 320 (470)
T ss_dssp CSCCEEEEGGGGGGCSTTCTTTCEECEECTTCTTEEEEEEEECTT-CEEEEESSSSSSSCBC
T ss_pred cceEEEEeecccCCCCCCCcccccccccccCcCceEEEEEEECCC-ceEEEEecCCcccccc
Confidence 4679999999977532 1344333457889998888654 5889999888866543
No 174
>4dny_A Metalloprotease STCE; metzincin, bacterial zinc metalloprotease, O-linked glycoPro hydrolase; 1.61A {Escherichia coli}
Probab=40.98 E-value=25 Score=28.38 Aligned_cols=23 Identities=26% Similarity=0.618 Sum_probs=18.6
Q ss_pred EEecCCc-eEEEEEEEcCeeecCCC
Q 014342 62 ICRLPPG-HHQYKFYVDGEWRHDEN 85 (426)
Q Consensus 62 ~~~L~~g-~y~ykFiVDg~w~~d~~ 85 (426)
++.|..| .|.|+| ++|.|+-+.+
T Consensus 99 svtl~rG~t~~F~y-~~g~Wv~~gd 122 (126)
T 4dny_A 99 KVTLSVGNTLLFKY-VNGQWFRSGE 122 (126)
T ss_dssp EEEECTTCEEEEEE-ETTEEEETTC
T ss_pred EEEecCCCEEEEEE-cCCEEEEccc
Confidence 3567888 699999 9999998654
No 175
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=40.07 E-value=13 Score=32.98 Aligned_cols=49 Identities=18% Similarity=0.224 Sum_probs=35.1
Q ss_pred ceEEEEec--cCCCCCC--CCCCCCCCCCCeEEEEEecCCceEEEEEEEcCee
Q 014342 32 RRVSLSGS--FTRWSEP--MPMSPSEGCPAVFQIICRLPPGHHQYKFYVDGEW 80 (426)
Q Consensus 32 ~~V~l~Gs--f~~W~~~--~~m~~~~~~~~~~~~~~~L~~g~y~ykFiVDg~w 80 (426)
.+|+|+|+ -++|... .+|......++.|.....|..|.++++|-.+..|
T Consensus 117 ~~v~liG~at~~gW~~~~~~~~t~~~t~~g~~~~~~~l~~Ge~k~~~~~~~DW 169 (221)
T 4fch_A 117 AEVYLFGNTTGGSWAFNDEWKFTVPATKDGNFVSPAMTASGEVRMCFKTDLDW 169 (221)
T ss_dssp CCEEEEBGGGTSBCSCBGGGBCBCCSSTTCCEECCCCCSCEECEEEECCSSCG
T ss_pred ceEEEEEeecCCCCCCCcccceeeccCCCceEEeEEEecCCcEEEEEcCCCCc
Confidence 45999998 4689864 3565433457899988999999887776555433
No 176
>2fqm_A Phosphoprotein, P protein; negative strand RNA virus, polymerase, replication, cofactor, viral protein; 2.30A {Vesicular stomatitis indiana virus} SCOP: d.378.1.1
Probab=38.30 E-value=14 Score=26.22 Aligned_cols=27 Identities=22% Similarity=0.412 Sum_probs=16.5
Q ss_pred eccCCCCCCCCCCCCCCCCCeEEEEEecCCc
Q 014342 38 GSFTRWSEPMPMSPSEGCPAVFQIICRLPPG 68 (426)
Q Consensus 38 Gsf~~W~~~~~m~~~~~~~~~~~~~~~L~~g 68 (426)
|||.+|+. ..|+.+ ++.-++.+.+|.|
T Consensus 1 ~~~s~W~q-P~lk~~---g~~KsL~Lf~P~g 27 (75)
T 2fqm_A 1 GSHMDWKQ-PELESD---EHGKTLRLTLPEG 27 (75)
T ss_dssp ----CCCC-CEEEEE---TTEEEEEEECCSS
T ss_pred CCcccccC-ceeecC---CCCceEEEeCCCC
Confidence 89999987 346543 5677888888877
No 177
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=30.18 E-value=22 Score=31.39 Aligned_cols=26 Identities=15% Similarity=0.323 Sum_probs=19.6
Q ss_pred cCCcEeeEEcCCCcEEEEEeHHHHHH
Q 014342 370 ADVSSIPIVDDNDSLLDIYSRSDITA 395 (426)
Q Consensus 370 ~~i~~lPVVd~~g~lvGiis~~DI~~ 395 (426)
.+-|.=||+|.+|+++||-+.+|=..
T Consensus 124 pGdSGsPVvn~dG~VIGVHt~s~~~g 149 (213)
T 3fan_A 124 CGDSGSPVITEAGELVGVHTGSNKQG 149 (213)
T ss_dssp CCSTTCEEEETTSCEEEEEEC-----
T ss_pred CCCCCCccCCCCCcEEEEEeccCCcc
Confidence 57888999999999999999998543
No 178
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=27.37 E-value=84 Score=24.39 Aligned_cols=17 Identities=24% Similarity=0.597 Sum_probs=13.1
Q ss_pred ceEEEEEEEcCeeecCCCC
Q 014342 68 GHHQYKFYVDGEWRHDENQ 86 (426)
Q Consensus 68 g~y~ykFiVDg~w~~d~~~ 86 (426)
| |+|.|. +|.|+++-+.
T Consensus 68 G-~hfd~~-~~~Wi~~r~g 84 (106)
T 1ew4_A 68 G-YHFDLK-GDEWICDRSG 84 (106)
T ss_dssp E-EEEEEE-TTEEEETTTC
T ss_pred c-eeeeec-CCEEEECCCC
Confidence 5 888885 8999987543
No 179
>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}
Probab=26.35 E-value=1.7e+02 Score=22.78 Aligned_cols=60 Identities=15% Similarity=0.301 Sum_probs=41.9
Q ss_pred CcceEEEEEecCCC---ceEEEEe-ccCCCCCCCCCCCCCCCCCeEEEEEe-cCCceEEEEEEE-cCeeecC
Q 014342 18 SILVPVRFIWPNGG---RRVSLSG-SFTRWSEPMPMSPSEGCPAVFQIICR-LPPGHHQYKFYV-DGEWRHD 83 (426)
Q Consensus 18 ~~~~~v~f~~~~~~---~~V~l~G-sf~~W~~~~~m~~~~~~~~~~~~~~~-L~~g~y~ykFiV-Dg~w~~d 83 (426)
+...-+.+.+-+++ ..|.|.| +=.+|. +|.+. ...|+..-. .+.|-+.||+.. ||+|...
T Consensus 25 p~~l~VlV~nv~G~GdI~~V~Ik~~~~~~W~---~M~rn---Ga~W~~~s~~~L~GplSfRvtts~G~~~va 90 (108)
T 2jnz_A 25 PKKLVLDIKYTRPGDSLAEVELRQHGSEEWE---PLTKK---GNVWEVKSSKPLVGPFNFRFMSKGGMRNVF 90 (108)
T ss_dssp SSEEEEEEEEEBTTBCEEEEEEECTTCCCCE---ECEEE---TTEEEEECSSCCCSSEEEEEEETTTEEEEE
T ss_pred ccEEEEEEEEeCCCCCEEEEEEEeCCCCcEe---Ecccc---CCEeEeCCCCCCCCCEEEEEEEcCCcEEEE
Confidence 45566666676643 6689996 666785 68886 468998752 345789999987 6787654
No 180
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=26.17 E-value=43 Score=26.55 Aligned_cols=17 Identities=29% Similarity=0.419 Sum_probs=14.2
Q ss_pred EeeEEcCCCcEEEEEeH
Q 014342 374 SIPIVDDNDSLLDIYSR 390 (426)
Q Consensus 374 ~lPVVd~~g~lvGiis~ 390 (426)
..||.|++|+++|+++.
T Consensus 105 ~~PV~~~~g~viGvv~v 121 (131)
T 1p0z_A 105 KSPIQDATGKVIGIVSV 121 (131)
T ss_dssp EEEEECTTCCEEEEEEE
T ss_pred EEeEECCCCCEEEEEEE
Confidence 46999888999999874
No 181
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=25.23 E-value=52 Score=22.46 Aligned_cols=35 Identities=14% Similarity=0.199 Sum_probs=24.6
Q ss_pred HHHHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHH
Q 014342 363 ALALLVQADVSSIPIVDDNDSLLDIYSRSDITALA 397 (426)
Q Consensus 363 a~~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~ 397 (426)
..+.+...++..+|++-.+|+.+|-.+...|..++
T Consensus 39 ~~~~~~~~~~~~vP~l~~~g~~~~g~~~~~l~~~l 73 (75)
T 1r7h_A 39 ARDYVMALGYVQAPVVEVDGEHWSGFRPERIKQLQ 73 (75)
T ss_dssp HHHHHHHTTCBCCCEEEETTEEEESCCHHHHHHHH
T ss_pred HHHHHHHcCCCccCEEEECCeEEcCCCHHHHHHHH
Confidence 33444668999999886678877767776666544
No 182
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=24.98 E-value=48 Score=34.78 Aligned_cols=57 Identities=16% Similarity=0.088 Sum_probs=36.3
Q ss_pred cceEEEEEecCCCceEEEEeccCCCCCCCCCCCCCCCCCeEEEEEecCCceEEEEEEEcC
Q 014342 19 ILVPVRFIWPNGGRRVSLSGSFTRWSEPMPMSPSEGCPAVFQIICRLPPGHHQYKFYVDG 78 (426)
Q Consensus 19 ~~~~v~f~~~~~~~~V~l~Gsf~~W~~~~~m~~~~~~~~~~~~~~~L~~g~y~ykFiVDg 78 (426)
..+.++|+-+.+..+|.+...-..|.. .|.........|+++++ +.+.+.|.|.+++
T Consensus 132 ~~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~Y~f~~~~ 188 (696)
T 4aee_A 132 GEIIIRLIAPTEINEPLIDLGNEIREP--LTKHVVGDNIVYQYIIP-SRSILRYRFIFNY 188 (696)
T ss_dssp TEEEEEEEEETTSCCCEEECSSCEECC--SEEEEETTEEEEEEEEE-CCSEEEEEEEEEE
T ss_pred CEEEEEEEEcCCCCEEEEEcCCcceee--eeeeecCCceEEEEEEc-CCCeEEEEEEEEE
Confidence 466777765556666767654344442 33332222348999999 7788999999853
No 183
>1mhx_A Immunoglobulin-binding protein G; alpha-beta protein, redesigned first beta-hairpin, immune SY; 1.80A {Finegoldia magna} SCOP: d.15.7.1 PDB: 1mi0_A
Probab=24.85 E-value=25 Score=23.90 Aligned_cols=13 Identities=46% Similarity=0.925 Sum_probs=10.3
Q ss_pred EcCeeecCCCCCe
Q 014342 76 VDGEWRHDENQPH 88 (426)
Q Consensus 76 VDg~w~~d~~~p~ 88 (426)
|||+|.+|+.-.+
T Consensus 48 vdgeWsYD~ATkT 60 (65)
T 1mhx_A 48 VDGEWTYDDAAKT 60 (65)
T ss_dssp CCSEEEEETTTTE
T ss_pred CccEEEecCceeE
Confidence 5899999987654
No 184
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=24.73 E-value=46 Score=26.88 Aligned_cols=19 Identities=21% Similarity=0.303 Sum_probs=15.1
Q ss_pred EeeEEcCCCcEEEEEeHHH
Q 014342 374 SIPIVDDNDSLLDIYSRSD 392 (426)
Q Consensus 374 ~lPVVd~~g~lvGiis~~D 392 (426)
..||.|++|+++|+++..-
T Consensus 110 ~~PV~~~~g~viGvv~vg~ 128 (142)
T 3by8_A 110 FTPIYDENHKQIGVVAIGL 128 (142)
T ss_dssp EEEEECTTSCEEEEEEEEE
T ss_pred EEeEEcCCCCEEEEEEEeE
Confidence 4699987899999987543
No 185
>2bem_A CBP21; chitin-binding protein, chitin degradation, chitin-binding, FNIII-like fold; 1.55A {Serratia marcescens} SCOP: b.1.18.2 PDB: 2lhs_A 2ben_A
Probab=24.34 E-value=1.8e+02 Score=24.61 Aligned_cols=71 Identities=14% Similarity=0.289 Sum_probs=42.5
Q ss_pred EEEEEecCCC------ceEEEEeccCCCCCCCCCCCCCC--------------CCCeEEEEEecCCceEEEEEEEcCeee
Q 014342 22 PVRFIWPNGG------RRVSLSGSFTRWSEPMPMSPSEG--------------CPAVFQIICRLPPGHHQYKFYVDGEWR 81 (426)
Q Consensus 22 ~v~f~~~~~~------~~V~l~Gsf~~W~~~~~m~~~~~--------------~~~~~~~~~~L~~g~y~ykFiVDg~w~ 81 (426)
+++|+|...| =++||+- .+|++..||.+.+. .++.++.++.||.|+--| ++|=.+|.
T Consensus 76 ~~~f~w~~TA~H~t~~~~~YITK--~gwdp~~pLtw~dlel~pf~~~~~~~~~p~~~~~~~~~lP~~rsG~-hVI~~vWq 152 (170)
T 2bem_A 76 PNSFTWKLTARHSTTSWRYFITK--PNWDASQPLTRASFDLTPFCQFNDGGAIPAAQVTHQCNIPADRSGS-HVILAVWD 152 (170)
T ss_dssp EEEEEEEESSCCCEEEEEEEEEC--TTCCTTSCCCGGGEEEEEEEEEECTTCCCCSEEEEEEEECTTCCEE-EEEEEEEE
T ss_pred cEEEEEEeecccCCceEEEEECC--CCCCCCCCccHHHccccceeecCCCCcCCCceEEEEEEcCCCCccC-EEEEEEEE
Confidence 6788887643 2366654 46777667764321 124677788888754332 44556787
Q ss_pred cCCCCCeeeCCCCCeeeEEEe
Q 014342 82 HDENQPHVSGNYGVVNCVYIA 102 (426)
Q Consensus 82 ~d~~~p~~~d~~G~~nn~~~v 102 (426)
..+ ..-.+.|+++|
T Consensus 153 ~~D-------t~eaFY~c~DV 166 (170)
T 2bem_A 153 IAD-------TANAFYQAIDV 166 (170)
T ss_dssp ESS-------SSEEEEEEEEE
T ss_pred ecc-------CCCCCEEEEEE
Confidence 654 12246777776
No 186
>4a02_A EFCBM33A, CBM33, chitin binding protein; chitin degradation, chitin oxidation; 0.95A {Enterococcus faecalis} SCOP: b.1.18.0
Probab=23.96 E-value=1.8e+02 Score=24.45 Aligned_cols=71 Identities=11% Similarity=0.250 Sum_probs=42.4
Q ss_pred EEEEEecCCC------ceEEEEeccCCCCCCCCCCCCC------------CCCCeEEEEEecCCceEEEEEEEcCeeecC
Q 014342 22 PVRFIWPNGG------RRVSLSGSFTRWSEPMPMSPSE------------GCPAVFQIICRLPPGHHQYKFYVDGEWRHD 83 (426)
Q Consensus 22 ~v~f~~~~~~------~~V~l~Gsf~~W~~~~~m~~~~------------~~~~~~~~~~~L~~g~y~ykFiVDg~w~~d 83 (426)
+++|+|...| =++||+ =.+|++..||.+++ ..++.|+.++.||.++--| ++|=.+|...
T Consensus 75 ~~~f~w~~TA~H~t~~~~~YIT--K~gwdp~~pLtw~dle~~~~~~~~~~~p~~~y~~~v~lP~~rsG~-hVI~~vWq~~ 151 (166)
T 4a02_A 75 PLDITWNLTAQHRTASWDYYIT--KNGWNPNQPLDIKNFDKIASIDGKQEVPNKVVKQTINIPTDRKGY-HVIYAVWGIG 151 (166)
T ss_dssp EEEEEEEESSCCCEEEEEEEEE--CTTCCTTSCCCGGGEEEEEEEEEEEECCCSEEEEEEEECTTCCEE-EEEEEEEEES
T ss_pred ceEEEEeeecccCCCeEEEEEc--CCCCCCCCCccHHHCeeeeeecCCCcCCCCeEEEEEEeCCCCccC-EEEEEEEEec
Confidence 4788887643 236664 35788877887542 1135677778888653221 2555778765
Q ss_pred CCCCeeeCCCCCeeeEEEe
Q 014342 84 ENQPHVSGNYGVVNCVYIA 102 (426)
Q Consensus 84 ~~~p~~~d~~G~~nn~~~v 102 (426)
+. .-.+.|+++|
T Consensus 152 Dt-------~eaFY~csDV 163 (166)
T 4a02_A 152 DT-------VNAFYQAIDV 163 (166)
T ss_dssp SS-------SEEEEEEEEE
T ss_pred CC-------CCCCEEEEEE
Confidence 33 2246677776
No 187
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=22.64 E-value=57 Score=25.62 Aligned_cols=48 Identities=21% Similarity=0.241 Sum_probs=30.5
Q ss_pred EEEcCCCCHHHHHHHHHhcCCcEee---EEcCCCcEE------EEEeHHHHHHHHhc
Q 014342 352 AMLRPTASLGSALALLVQADVSSIP---IVDDNDSLL------DIYSRSDITALAKD 399 (426)
Q Consensus 352 ~tv~~~~~l~~a~~~m~~~~i~~lP---VVd~~g~lv------Giis~~DI~~~~~~ 399 (426)
+.+..+....+..++..+.++.++| ++|.+|+++ |..+..+|...+..
T Consensus 69 ~~vd~~~~~~~~~~l~~~~~v~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~ 125 (134)
T 2fwh_A 69 LQANVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRD 125 (134)
T ss_dssp EEEECTTCCHHHHHHHHHTTCCSSSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHH
T ss_pred EEEeCCCCcchHHHHHHHcCCCCCCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHh
Confidence 3444443334444555566776666 677888765 78888888887654
No 188
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=22.26 E-value=46 Score=24.15 Aligned_cols=34 Identities=18% Similarity=0.267 Sum_probs=26.0
Q ss_pred HHHHhcCCcEeeEEcCCCcEEEEEeHHHHHHHHh
Q 014342 365 ALLVQADVSSIPIVDDNDSLLDIYSRSDITALAK 398 (426)
Q Consensus 365 ~~m~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~ 398 (426)
++...+++..+|++-.+|+.+|-.+...|.+++.
T Consensus 58 ~l~~~~g~~~vP~l~~~g~~i~G~~~~~l~~~l~ 91 (92)
T 3ic4_A 58 KVHSISGSYSVPVVVKGDKHVLGYNEEKLKELIR 91 (92)
T ss_dssp HHHHHHSSSCSCEEEETTEEEESCCHHHHHHHHH
T ss_pred HHHHhcCCCCcCEEEECCEEEeCCCHHHHHHHhc
Confidence 3344678889999877888888888888877653
No 189
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=21.27 E-value=47 Score=29.40 Aligned_cols=22 Identities=14% Similarity=0.212 Sum_probs=18.8
Q ss_pred cCCcEeeEEcCCCcEEEEEeHH
Q 014342 370 ADVSSIPIVDDNDSLLDIYSRS 391 (426)
Q Consensus 370 ~~i~~lPVVd~~g~lvGiis~~ 391 (426)
.+-++=|++|.+|+++||++..
T Consensus 186 ~G~SGGPLv~~~G~vVGI~s~~ 207 (231)
T 3tjo_A 186 YGNAGGPLVNLDGEVIGINTLK 207 (231)
T ss_dssp TTTTTSEEECTTSCEEEEEEEE
T ss_pred CCCchhHeecCCCeEEEEEeEE
Confidence 4778889999899999999864
No 190
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=21.22 E-value=89 Score=21.68 Aligned_cols=33 Identities=12% Similarity=0.186 Sum_probs=24.1
Q ss_pred HhcCCcEeeEEcCCCcEEEEEeHHHHHHHHhcccc
Q 014342 368 VQADVSSIPIVDDNDSLLDIYSRSDITALAKDKAY 402 (426)
Q Consensus 368 ~~~~i~~lPVVd~~g~lvGiis~~DI~~~~~~~~~ 402 (426)
...++..+|++-.+|+.+| ...+|..++..+..
T Consensus 45 ~~~~~~~vP~l~~~g~~i~--g~~~i~~~~~~g~l 77 (82)
T 1fov_A 45 KRSGRTTVPQIFIDAQHIG--GYDDLYALDARGGL 77 (82)
T ss_dssp HHHSSCCSCEEEETTEEEE--SHHHHHHHHHTTCS
T ss_pred HHhCCCCcCEEEECCEEEe--CHHHHHHHHHCCCH
Confidence 3468999999866788766 45678888777643
No 191
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=21.01 E-value=86 Score=32.40 Aligned_cols=51 Identities=20% Similarity=0.229 Sum_probs=36.1
Q ss_pred ceEEEEEecC-CCceEEEEeccCCCCCCCCCCCCCCCCC---eEEEEEecCCceEEEEEEE
Q 014342 20 LVPVRFIWPN-GGRRVSLSGSFTRWSEPMPMSPSEGCPA---VFQIICRLPPGHHQYKFYV 76 (426)
Q Consensus 20 ~~~v~f~~~~-~~~~V~l~Gsf~~W~~~~~m~~~~~~~~---~~~~~~~L~~g~y~ykFiV 76 (426)
.+.++|+-+. ...+|.++|. ...||.+.. +.+ .|.+.++.+.....|+|.|
T Consensus 124 ~~~~r~~~~~~~~~~~~~~~~-----~~~~m~~~~-~~~~~d~w~~~v~~~~~~~~Y~f~i 178 (645)
T 4aef_A 124 RVHVLLRTQKGVIKGATFLGE-----KHVPMRKKA-SDELFDYFEVIVEGGDKRLNYSFEV 178 (645)
T ss_dssp EEEEEEEEETTTEEEEEEESS-----SEEECEEEE-ECSSEEEEEEEEECSCSCEEEEEEE
T ss_pred eEEEEEEcccCCcceEEEeCC-----CEEEEEEEe-cCCCeEEEEEEEECCCCceEEEEEE
Confidence 4556665444 3677888764 457998764 344 4889998888888999987
No 192
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=20.28 E-value=49 Score=29.36 Aligned_cols=22 Identities=18% Similarity=0.172 Sum_probs=19.2
Q ss_pred hcCCcEeeEEcCCCcEEEEEeH
Q 014342 369 QADVSSIPIVDDNDSLLDIYSR 390 (426)
Q Consensus 369 ~~~i~~lPVVd~~g~lvGiis~ 390 (426)
..+-++=|++|.+|+++||+|.
T Consensus 172 ~~G~SGGPlv~~~G~vvGI~s~ 193 (237)
T 3lgi_A 172 NHGNSGGALVNSLGELMGINTL 193 (237)
T ss_dssp CTTCTTCEEECTTCCEEEEECC
T ss_pred CCCCchHHeeCCCCeEEEEEee
Confidence 4677888999999999999886
No 193
>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} SCOP: b.7.3.0 PDB: 3ft9_A
Probab=20.08 E-value=1.9e+02 Score=22.05 Aligned_cols=60 Identities=15% Similarity=0.299 Sum_probs=42.1
Q ss_pred CcceEEEEEecCCC---ceEEEEeccC-CCCCCCCCCCCCCCCCeEEEEEe-cCCceEEEEEEE-cCeeecC
Q 014342 18 SILVPVRFIWPNGG---RRVSLSGSFT-RWSEPMPMSPSEGCPAVFQIICR-LPPGHHQYKFYV-DGEWRHD 83 (426)
Q Consensus 18 ~~~~~v~f~~~~~~---~~V~l~Gsf~-~W~~~~~m~~~~~~~~~~~~~~~-L~~g~y~ykFiV-Dg~w~~d 83 (426)
+...-+.+.+-+++ ..|.|.|+=+ +|. +|.+ - +..|++.-. ...|-+.||+.. ||++...
T Consensus 14 ~~~l~vlv~nv~G~gdI~~V~ik~s~t~~W~---~M~r-w--Ga~W~~~s~~~l~GplSfRvt~~~G~~~v~ 79 (100)
T 3ft1_A 14 PKKLVLDIKYTRPGDSLAEVELRQHGSEEWE---PLTK-K--GNVWEVKSSKPLVGPFNFRFMSKGGMRNVF 79 (100)
T ss_dssp TTEEEEEEEEECTTCCEEEEEEECTTCCCCE---ECEE-E--TTEEEEECSSCCCSSEEEEEEETTCCEEEE
T ss_pred cceEEEEEEEcCCCccEEEEEEEeCCCCCeE---Eecc-c--CCEeEeCCCCCCCCCEEEEEEEcCCcEEEE
Confidence 44556666766643 6688999876 686 6887 4 568998852 345788888887 7877654
Done!