BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014343
(426 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 172/434 (39%), Gaps = 65/434 (14%)
Query: 2 GFICFSEVLAESHEKYGSVVKLWLGPTKLLVSIKEPALIKEMLSKAEDKPPLTGRAF-RL 60
GF F E H+KYG V + G +L +I +P +IK +L K R F +
Sbjct: 36 GFCMFD---MECHKKYGKVWGFYDGQQPVL-AITDPDMIKTVLVKECYSVFTNRRPFGPV 91
Query: 61 AFGQSSLFASTFDRVKKRRVTLS-TELNGRLLERGKVIPARVVDCLMERIHDILGKGN-I 118
F +S++ + + K+ R LS T +G+L E +I A+ D L+ + G +
Sbjct: 92 GFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPII-AQYGDVLVRNLRREAETGKPV 150
Query: 119 SCKMISQHMAFSLLGATIFG----------DEFFAWSKATVYEELFMTIAKDACFWASYS 168
+ K + + ++ +T FG D F +K + + F+ S +
Sbjct: 151 TLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFL------DPFFLSIT 204
Query: 169 VTPFWKRGFWRYQHLCEKLKCLTQDIIQQCQR--NCKLISGMDHNFDNETAYKRMEAALG 226
V PF ++C + +T + + +R +L H D ++ +
Sbjct: 205 VFPFLI-PILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVD------FLQLMID 257
Query: 227 GSSSFDALVSQEPSGYLQAREEPCRNIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIY 286
+S + E L E ++I+ +F GY TT+ ++ I+ LATH D+Q+K+
Sbjct: 258 SQNSKET----ESHKALSDLELVAQSII-FIFAGYETTSSVLSFIMYELATHPDVQQKLQ 312
Query: 287 SEIIMARKGLGEKDQQSVDNMLLLLATIYESARLLPAGPFLQRCSLK------------- 333
EI +V M L + E+ RL P L+R K
Sbjct: 313 EEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGV 372
Query: 334 ---------HGNAEEYVDPRQ---SSFVLNDPNNNAAFL--PFGSGSRACVGQKYVTQGI 379
H + + + +P + F + +N ++ PFGSG R C+G ++ +
Sbjct: 373 VVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNM 432
Query: 380 ATLFASLLERYEIR 393
+L+ + +
Sbjct: 433 KLALIRVLQNFSFK 446
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 172/434 (39%), Gaps = 65/434 (14%)
Query: 2 GFICFSEVLAESHEKYGSVVKLWLGPTKLLVSIKEPALIKEMLSKAEDKPPLTGRAF-RL 60
GF F E H+KYG V + G +L +I +P +IK +L K R F +
Sbjct: 35 GFCMFD---MECHKKYGKVWGFYDGQQPVL-AITDPDMIKTVLVKECYSVFTNRRPFGPV 90
Query: 61 AFGQSSLFASTFDRVKKRRVTLS-TELNGRLLERGKVIPARVVDCLMERIHDILGKGN-I 118
F +S++ + + K+ R LS T +G+L E +I A+ D L+ + G +
Sbjct: 91 GFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPII-AQYGDVLVRNLRREAETGKPV 149
Query: 119 SCKMISQHMAFSLLGATIFG----------DEFFAWSKATVYEELFMTIAKDACFWASYS 168
+ K + + ++ +T FG D F +K + + F+ S +
Sbjct: 150 TLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFL------DPFFLSIT 203
Query: 169 VTPFWKRGFWRYQHLCEKLKCLTQDIIQQCQR--NCKLISGMDHNFDNETAYKRMEAALG 226
V PF ++C + +T + + +R +L H D ++ +
Sbjct: 204 VFPFLI-PILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVD------FLQLMID 256
Query: 227 GSSSFDALVSQEPSGYLQAREEPCRNIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIY 286
+S + E L E ++I+ +F GY TT+ ++ I+ LATH D+Q+K+
Sbjct: 257 SQNSKET----ESHKALSDLELVAQSII-FIFAGYETTSSVLSFIMYELATHPDVQQKLQ 311
Query: 287 SEIIMARKGLGEKDQQSVDNMLLLLATIYESARLLPAGPFLQRCSLK------------- 333
EI +V M L + E+ RL P L+R K
Sbjct: 312 EEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGV 371
Query: 334 ---------HGNAEEYVDPRQ---SSFVLNDPNNNAAFL--PFGSGSRACVGQKYVTQGI 379
H + + + +P + F + +N ++ PFGSG R C+G ++ +
Sbjct: 372 VVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNM 431
Query: 380 ATLFASLLERYEIR 393
+L+ + +
Sbjct: 432 KLALIRVLQNFSFK 445
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 172/434 (39%), Gaps = 65/434 (14%)
Query: 2 GFICFSEVLAESHEKYGSVVKLWLGPTKLLVSIKEPALIKEMLSKAEDKPPLTGRAF-RL 60
GF F E H+KYG V + G +L +I +P +IK +L K R F +
Sbjct: 34 GFCMFD---MECHKKYGKVWGFYDGQQPVL-AITDPDMIKTVLVKECYSVFTNRRPFGPV 89
Query: 61 AFGQSSLFASTFDRVKKRRVTLS-TELNGRLLERGKVIPARVVDCLMERIHDILGKGN-I 118
F +S++ + + K+ R LS T +G+L E +I A+ D L+ + G +
Sbjct: 90 GFMKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMVPII-AQYGDVLVRNLRREAETGKPV 148
Query: 119 SCKMISQHMAFSLLGATIFG----------DEFFAWSKATVYEELFMTIAKDACFWASYS 168
+ K + + ++ +T FG D F +K + + F+ S +
Sbjct: 149 TLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVENTKKLLRFDFL------DPFFLSIT 202
Query: 169 VTPFWKRGFWRYQHLCEKLKCLTQDIIQQCQR--NCKLISGMDHNFDNETAYKRMEAALG 226
V PF ++C + +T + + +R +L H D ++ +
Sbjct: 203 VFPFLI-PILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVD------FLQLMID 255
Query: 227 GSSSFDALVSQEPSGYLQAREEPCRNIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIY 286
+S + E L E ++I+ +F GY TT+ ++ I+ LATH D+Q+K+
Sbjct: 256 SQNSKET----ESHKALSDLELVAQSII-FIFAGYETTSSVLSFIMYELATHPDVQQKLQ 310
Query: 287 SEIIMARKGLGEKDQQSVDNMLLLLATIYESARLLPAGPFLQRCSLK------------- 333
EI +V M L + E+ RL P L+R K
Sbjct: 311 EEIDAVLPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGV 370
Query: 334 ---------HGNAEEYVDPRQ---SSFVLNDPNNNAAFL--PFGSGSRACVGQKYVTQGI 379
H + + + +P + F + +N ++ PFGSG R C+G ++ +
Sbjct: 371 VVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNM 430
Query: 380 ATLFASLLERYEIR 393
+L+ + +
Sbjct: 431 KLALIRVLQNFSFK 444
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 32/166 (19%)
Query: 260 GYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGEKDQQSVDNMLLLL-ATIYESA 318
G TT +V LA L + +++K+Y EI G S N LLLL ATI E
Sbjct: 285 GVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQ-NVGFSRTPTISDRNRLLLLEATIREVL 343
Query: 319 RLLPAGPFL--QRCSLK---------------------HGNAEEYVDPRQ--SSFVLNDP 353
RL P P L + ++ H N +E+ P Q LN
Sbjct: 344 RLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPA 403
Query: 354 NN-----NAAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRL 394
+ ++LPFG+G R+C+G+ Q + + A LL+R+++ +
Sbjct: 404 GTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEV 449
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 40/207 (19%)
Query: 240 SGYLQAREEPCRNIMGVMFHGYLTTAGLVGNILARL----------ATHQDIQE------ 283
G + E C I+ MF G T+ + L H++I E
Sbjct: 243 DGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLN 302
Query: 284 --KIYSEIIMARKGLGE---KDQQSVDNMLLLLATIYESARLLPAGPFLQRCS--LKHGN 336
+ E+ A + + E +D + M ++ A + + ++P G + CS L H +
Sbjct: 303 YDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIA-CSPLLSHHD 361
Query: 337 AEEYVDPRQSSFVLNDPNNN----AAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEI 392
E + +PR L DP + AF+ FG+G C+GQK+ + T+ A+ Y+
Sbjct: 362 EEAFPNPR-----LWDPERDEKVDGAFIGFGAGVHKCIGQKFALLQVKTILATAFREYDF 416
Query: 393 RLQPGSEKNPK-------PTVNNCVFQ 412
+L +P PT+N C+ +
Sbjct: 417 QLLRDEVPDPDYHTMVVGPTLNQCLVK 443
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 40/207 (19%)
Query: 240 SGYLQAREEPCRNIMGVMFHGYLTTAGLVGNILARL----------ATHQDIQE------ 283
G + E C I+ MF G T+ + L H++I E
Sbjct: 258 DGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLN 317
Query: 284 --KIYSEIIMARKGLGE---KDQQSVDNMLLLLATIYESARLLPAGPFLQRCS--LKHGN 336
+ E+ A + + E +D + M ++ A + + ++P G + CS L H +
Sbjct: 318 YDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIA-CSPLLSHHD 376
Query: 337 AEEYVDPRQSSFVLNDPNNN----AAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEI 392
E + +PR L DP + AF+ FG+G C+GQK+ + T+ A+ Y+
Sbjct: 377 EEAFPNPR-----LWDPERDEKVDGAFIGFGAGVHKCIGQKFALLQVKTILATAFREYDF 431
Query: 393 RLQPGSEKNPK-------PTVNNCVFQ 412
+L +P PT+N C+ +
Sbjct: 432 QLLRDEVPDPDYHTMVVGPTLNQCLVK 458
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 40/207 (19%)
Query: 240 SGYLQAREEPCRNIMGVMFHGYLTTAGLVGNILARL----------ATHQDIQE------ 283
G + E C I+ MF G T+ + L H++I E
Sbjct: 249 DGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLN 308
Query: 284 --KIYSEIIMARKGLGE---KDQQSVDNMLLLLATIYESARLLPAGPFLQRCS--LKHGN 336
+ E+ A + + E +D + M ++ A + + ++P G + CS L H +
Sbjct: 309 YDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIA-CSPLLSHHD 367
Query: 337 AEEYVDPRQSSFVLNDPNNN----AAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEI 392
E + +PR L DP + AF+ FG+G C+GQK+ + T+ A+ Y+
Sbjct: 368 EEAFPNPR-----LWDPERDEKVDGAFIGFGAGVHKCIGQKFALLQVKTILATAFREYDF 422
Query: 393 RLQPGSEKNPK-------PTVNNCVFQ 412
+L +P PT+N C+ +
Sbjct: 423 QLLRDEVPDPDYHTMVVGPTLNQCLVK 449
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 60/156 (38%), Gaps = 26/156 (16%)
Query: 263 TTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGEKDQQSVDNMLLLLATIYESARLLP 322
TTA + IL L+ + Q ++ E+ + + NM L A + ES RL P
Sbjct: 298 TTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKESMRLTP 357
Query: 323 AGPFLQRCSLKHGNAEEYVDPRQSSFVLND-----------------PN---------NN 356
+ PF R K EY P+ + LN P N
Sbjct: 358 SVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKKINP 417
Query: 357 AAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEI 392
A LPFG G R C+G++ + ++++Y+I
Sbjct: 418 FAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDI 453
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 145/381 (38%), Gaps = 52/381 (13%)
Query: 61 AFGQSSLFASTFDRVKKRRVTLSTELN-GRLLERGKVIPARVVDCLMERIHDILGKGNI- 118
FG+ +A+ + R++++ L+ EL + I V + + G+ NI
Sbjct: 81 VFGEGVAYAAPYPRMREQLNFLAEELTVAKFQNFAPSIQHEVRKFMKANWNKDEGEINIL 140
Query: 119 -SCKMISQHMAFSLLGATIFGDEFFAWSKATVYEELFMTIAKDACFWASYSVTPFWKRGF 177
C + + A L FG++ A + +L + ++C + P+ +
Sbjct: 141 DDCSAMIINTACQCL----FGEDLRKRLDARQFAQLLAKM--ESCLIPAAVFLPWILKLP 194
Query: 178 WRYQHLCEKLKCLTQDIIQQCQRNCKLISGMDHNFDNETAYKRMEAALGGSSSFDALVSQ 237
+ C + QDI+ + +I+ +T + A L G+ D
Sbjct: 195 LPQSYRCRDARAELQDILSEI-----IIAREKEEAQKDTNTSDLLAGLLGAVYRD----- 244
Query: 238 EPSGYLQAREEPCRNIMGVMFHGYLTTAGLVGNILARLAT----------HQDIQE---- 283
G ++ E C I+ MF G T+ L L HQ+I E
Sbjct: 245 ---GTRMSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMDPRNKRHLAKLHQEIDEFPAQ 301
Query: 284 ----KIYSEIIMARKGLGE---KDQQSVDNMLLLLATIYESARLLPAGPFLQRCS--LKH 334
+ E+ A + E +D V M +L + ++P G + CS L H
Sbjct: 302 LNYDNVMEEMPFAEQCARESIRRDPPLVMLMRKVLKPVQVGKYVVPEGDIIA-CSPLLSH 360
Query: 335 GNAEEYVDPRQSSFVLNDPNNNAAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIR- 393
+ E + +PR+ + N + AF FG+G C+G+K+ + T+ A++L Y+
Sbjct: 361 QDEEAFPNPREWNPERNMKLVDGAFCGFGAGVHKCIGEKFGLLQVKTVLATVLRDYDFEL 420
Query: 394 LQPGSEKNPK-----PTVNNC 409
L P E N PT + C
Sbjct: 421 LGPLPEPNYHTMVVGPTASQC 441
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 65/151 (43%), Gaps = 27/151 (17%)
Query: 271 ILARLATHQDIQEKIYSEIIMARKGLGEKDQQ--SVDNMLLLLATIYESARLLPAGPFLQ 328
+L +A H +++E I EI + +GE+D + + + ++ IYES R P +
Sbjct: 318 MLFLIAKHPNVEEAIIKEI---QTVIGERDIKIDDIQKLKVMENFIYESMRYQPVVDLVM 374
Query: 329 RCSLKHGNAEEYVDPRQSSFVLN-----------DPNN----NAA-------FLPFGSGS 366
R +L+ + Y + ++ +LN PN N A F PFG G
Sbjct: 375 RKALEDDVIDGYPVKKGTNIILNIGRMHRLEFFPKPNEFTLENFAKNVPYRYFQPFGFGP 434
Query: 367 RACVGQKYVTQGIATLFASLLERYEIRLQPG 397
R C G+ + + +LL R+ ++ G
Sbjct: 435 RGCAGKYIAMVMMKAILVTLLRRFHVKTLQG 465
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 93/231 (40%), Gaps = 37/231 (16%)
Query: 214 NETAYKRMEAALGGSSSFDALVSQEPS-----GYLQAREEPCRNIMGVMFHGYLTTAGLV 268
+E R AA+ SS L+S S G + E C I+ MF G T++
Sbjct: 227 SEIIIARKAAAVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITT 286
Query: 269 ----------GNILARLATHQDIQE--------KIYSEIIMARKGLGEKDQQSVDNMLLL 310
N+ A ++I+E + E+ A + E ++ ++L+
Sbjct: 287 TWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLM 346
Query: 311 ---LATIYESARLLPAGPFLQRCS--LKHGNAEEYVDPRQSSFVLNDPNNNAAFLPFGSG 365
+A + + ++P G + CS L H + E + +PR+ D AF+ FG+G
Sbjct: 347 RKVMADVKVGSYVVPKGDIIA-CSPLLSHHDEEAFPEPRRWD-PERDEKVEGAFIGFGAG 404
Query: 366 SRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPK-------PTVNNC 409
C+GQK+ + T+ A+ Y+ +L +P PT + C
Sbjct: 405 VHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTMVVGPTASQC 455
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 353 PNNNAAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPG 397
P + PF G R+C+GQ++ + + A LL+R E RL PG
Sbjct: 373 PKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPG 417
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 77/190 (40%), Gaps = 35/190 (18%)
Query: 252 NIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGEKDQQSVDNMLLLL 311
I+ ++F G+ T + + L H DI+E++ E + E +++ M L
Sbjct: 247 QILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLS-QELTAETLKKMPYLD 305
Query: 312 ATIYESARLLP--AGPF---LQRCSLK-----------------HGNAEEYVDPRQSSFV 349
+ E RL+P G F +Q C + H + + Y DP +
Sbjct: 306 QVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPE 365
Query: 350 LNDPNNNA------AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSE---- 399
P+ +A A +PFG G R C+G+++ + L+++++ L PG
Sbjct: 366 RFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQNLELV 425
Query: 400 --KNPKPTVN 407
+P+P N
Sbjct: 426 VTPSPRPKDN 435
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 92/231 (39%), Gaps = 37/231 (16%)
Query: 214 NETAYKRMEAALGGSSSFDALVSQEPS-----GYLQAREEPCRNIMGVMFHGYLTTAGLV 268
+E R E + SS L+S S G + E C I+ MF G T++
Sbjct: 213 SEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITT 272
Query: 269 ----------GNILARLATHQDIQE--------KIYSEIIMARKGLGEKDQQSVDNMLLL 310
N+ A ++I+E + E+ A + E ++ ++L+
Sbjct: 273 TWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLM 332
Query: 311 ---LATIYESARLLPAGPFLQRCS--LKHGNAEEYVDPRQSSFVLNDPNNNAAFLPFGSG 365
+A + + ++P G + CS L H + E + +PR+ D AF+ FG+G
Sbjct: 333 RKVMADVKVGSYVVPKGDIIA-CSPLLSHHDEEAFPEPRRWD-PERDEKVEGAFIGFGAG 390
Query: 366 SRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPK-------PTVNNC 409
C+GQK+ + T+ A+ Y+ +L +P PT + C
Sbjct: 391 VHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTMVVGPTASQC 441
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 92/231 (39%), Gaps = 37/231 (16%)
Query: 214 NETAYKRMEAALGGSSSFDALVSQEPS-----GYLQAREEPCRNIMGVMFHGYLTTAGLV 268
+E R E + SS L+S S G + E C I+ MF G T++
Sbjct: 214 SEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITT 273
Query: 269 ----------GNILARLATHQDIQE--------KIYSEIIMARKGLGEKDQQSVDNMLLL 310
N+ A ++I+E + E+ A + E ++ ++L+
Sbjct: 274 TWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLM 333
Query: 311 ---LATIYESARLLPAGPFLQRCS--LKHGNAEEYVDPRQSSFVLNDPNNNAAFLPFGSG 365
+A + + ++P G + CS L H + E + +PR+ D AF+ FG+G
Sbjct: 334 RKVMADVKVGSYVVPKGDIIA-CSPLLSHHDEEAFPEPRRWD-PERDEKVEGAFIGFGAG 391
Query: 366 SRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPK-------PTVNNC 409
C+GQK+ + T+ A+ Y+ +L +P PT + C
Sbjct: 392 VHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTMVVGPTASQC 442
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 92/231 (39%), Gaps = 37/231 (16%)
Query: 214 NETAYKRMEAALGGSSSFDALVSQEPS-----GYLQAREEPCRNIMGVMFHGYLTTAGLV 268
+E R E + SS L+S S G + E C I+ MF G T++
Sbjct: 214 SEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITT 273
Query: 269 ----------GNILARLATHQDIQE--------KIYSEIIMARKGLGEKDQQSVDNMLLL 310
N+ A ++I+E + E+ A + E ++ ++L+
Sbjct: 274 TWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLM 333
Query: 311 ---LATIYESARLLPAGPFLQRCS--LKHGNAEEYVDPRQSSFVLNDPNNNAAFLPFGSG 365
+A + + ++P G + CS L H + E + +PR+ D AF+ FG+G
Sbjct: 334 RKVMADVKVGSYVVPKGDIIA-CSPLLSHHDEEAFPEPRRWD-PERDEKVEGAFIGFGAG 391
Query: 366 SRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPK-------PTVNNC 409
C+GQK+ + T+ A+ Y+ +L +P PT + C
Sbjct: 392 VHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTMVVGPTASQC 442
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 92/231 (39%), Gaps = 37/231 (16%)
Query: 214 NETAYKRMEAALGGSSSFDALVSQEPS-----GYLQAREEPCRNIMGVMFHGYLTTAGLV 268
+E R E + SS L+S S G + E C I+ MF G T++
Sbjct: 215 SEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITT 274
Query: 269 ----------GNILARLATHQDIQE--------KIYSEIIMARKGLGEKDQQSVDNMLLL 310
N+ A ++I+E + E+ A + E ++ ++L+
Sbjct: 275 TWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLM 334
Query: 311 ---LATIYESARLLPAGPFLQRCS--LKHGNAEEYVDPRQSSFVLNDPNNNAAFLPFGSG 365
+A + + ++P G + CS L H + E + +PR+ D AF+ FG+G
Sbjct: 335 RKVMADVKVGSYVVPKGDIIA-CSPLLSHHDEEAFPEPRRWD-PERDEKVEGAFIGFGAG 392
Query: 366 SRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPK-------PTVNNC 409
C+GQK+ + T+ A+ Y+ +L +P PT + C
Sbjct: 393 VHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTMVVGPTASQC 443
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 92/231 (39%), Gaps = 37/231 (16%)
Query: 214 NETAYKRMEAALGGSSSFDALVSQEPS-----GYLQAREEPCRNIMGVMFHGYLTTAGLV 268
+E R E + SS L+S S G + E C I+ MF G T++
Sbjct: 227 SEIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITT 286
Query: 269 ----------GNILARLATHQDIQE--------KIYSEIIMARKGLGEKDQQSVDNMLLL 310
N+ A ++I+E + E+ A + E ++ ++L+
Sbjct: 287 TWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLM 346
Query: 311 ---LATIYESARLLPAGPFLQRCS--LKHGNAEEYVDPRQSSFVLNDPNNNAAFLPFGSG 365
+A + + ++P G + CS L H + E + +PR+ D AF+ FG+G
Sbjct: 347 RKVMADVKVGSYVVPKGDIIA-CSPLLSHHDEEAFPEPRRWD-PERDEKVEGAFIGFGAG 404
Query: 366 SRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPK-------PTVNNC 409
C+GQK+ + T+ A+ Y+ +L +P PT + C
Sbjct: 405 VHKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTMVVGPTASQC 455
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 88/447 (19%), Positives = 175/447 (39%), Gaps = 88/447 (19%)
Query: 10 LAESHEKYGSVVKLWLGPTKLLVSIKEPALIKEMLSKAEDKPPLTGRA----FRLAFGQS 65
L + E+YG V + LGP +++V A+ + ++ +AE+ +GR F F
Sbjct: 36 LMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEE---FSGRGEQATFDWVFKGY 92
Query: 66 SLFASTFDRVKK-RRVTLSTELNGRLLERGKVIPARVVDCLMERIHDILGKG--NISCKM 122
+ S +R K+ RR +++T + + +RG I R+ + I + G G NI
Sbjct: 93 GVVFSNGERAKQLRRFSIATLRDFGVGKRG--IEERIQEEAGFLIDALRGTGGANIDPTF 150
Query: 123 ISQHMAFSLLGATIFGDEFFAWSKATVYEELFMTIAKDACFWASYSVTPFWKRGFWRYQH 182
+++ + +FGD F K F+++ + S+ T
Sbjct: 151 FLSRTVSNVISSIVFGDRFDYKDKE------FLSLLR--MMLGSFQFTS------TSTGQ 196
Query: 183 LCEKLKCLTQDIIQQCQRNCKLISGMDHNFDNETAYKRMEAALGGSSSFDALVSQEPSGY 242
L E + + + Q+ +L+ G++ + + + L +S D + S +
Sbjct: 197 LYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHN--QRTLDPNSPRDFIDS-----F 249
Query: 243 LQAREEPCRN-------------IMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEI 289
L +E +N + + F G T + + L H +++ K++ EI
Sbjct: 250 LIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEI 309
Query: 290 IMARKGLGEKDQQSVDN---MLLLLATIYESAR---LLPAGPFLQRCSLKHGNAEEYVDP 343
+ +G+ Q ++ M + A I+E R ++P G L R K ++ P
Sbjct: 310 ---DRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMG--LARRVKKDTKFRDFFLP 364
Query: 344 RQSSF------VLNDPN---------------------NNAAFLPFGSGSRACVGQKYVT 376
+ + VL DP+ + AF+PF G R C G+
Sbjct: 365 KGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLAR 424
Query: 377 QGIATLFASLLERYEIRLQPGSEKNPK 403
+ F ++++ + ++ S ++PK
Sbjct: 425 MELFLFFTTVMQNFRLK----SSQSPK 447
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 57/137 (41%), Gaps = 26/137 (18%)
Query: 263 TTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGEKDQQSVDNMLLLLATIYESARLLP 322
TTA + L LA + D+Q+ + E + A + E Q++ + LL A + E+ RL P
Sbjct: 292 TTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHPQKATTELPLLRAALKETLRLYP 351
Query: 323 AGPFLQRCSLKHGNAEEYVDPRQS---SFVLNDPNNNAAF-------------------- 359
G FL+R + Y P + F+ + N A F
Sbjct: 352 VGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPERYNPQRWLDIRGSGRN 411
Query: 360 ---LPFGSGSRACVGQK 373
+PFG G R C+G++
Sbjct: 412 FHHVPFGFGMRQCLGRR 428
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 37/202 (18%)
Query: 247 EEPCRNIMGVMFH-GYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGEKDQQSVD 305
+E R ++ +F G +TT+ + L + H D+Q ++ EI + +
Sbjct: 270 DENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQA 329
Query: 306 NMLLLLATIYESAR---LLPAGPFLQRCSLKHGNAEEYVDPRQSSFVLN----------- 351
+M A I+E R ++P G + + + + + P+ ++ + N
Sbjct: 330 HMPYTTAVIHEVQRFGDIVPLG--MTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVW 387
Query: 352 ------DPNN----------NAAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQ 395
P + AFLPF +G RAC+G+ + F SLL+ + +
Sbjct: 388 EKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVP 447
Query: 396 PGSEKNPKPTVNNCVFQLLPCP 417
G P+P+ ++ VF L P
Sbjct: 448 TG---QPRPS-HHGVFAFLVSP 465
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 43/203 (21%)
Query: 247 EEPCRNIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGEKDQQSVDN 306
E+ N+ ++ G TT+ + L +A + +Q+ + +E++ AR + Q +
Sbjct: 271 EDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAAR----HQAQGDMAT 326
Query: 307 ML----LLLATIYESARLLPAGPFLQRCSLKHGNAEEYVDP-------------RQSSFV 349
ML LL A+I E+ RL P LQR + +Y+ P R+ +F
Sbjct: 327 MLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFF 386
Query: 350 LNDPNN-----------NAAF---LPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQ 395
DP N N + L FG G R C+G++ + ++LE + + +Q
Sbjct: 387 F-DPENFDPTRWLSKDKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQ 445
Query: 396 PGSEKNPKPTVNNCVFQLLPCPE 418
S+ F L+ PE
Sbjct: 446 HLSDV-------GTTFNLILMPE 461
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 43/203 (21%)
Query: 247 EEPCRNIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGEKDQQSVDN 306
E+ N+ ++ G TT+ + L +A + +Q+ + +E++ AR + Q +
Sbjct: 274 EDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAAR----HQAQGDMAT 329
Query: 307 ML----LLLATIYESARLLPAGPFLQRCSLKHGNAEEYVDP-------------RQSSFV 349
ML LL A+I E+ RL P LQR + +Y+ P R+ +F
Sbjct: 330 MLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFF 389
Query: 350 LNDPNN-----------NAAF---LPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQ 395
DP N N + L FG G R C+G++ + ++LE + + +Q
Sbjct: 390 F-DPENFDPTRWLSKDKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQ 448
Query: 396 PGSEKNPKPTVNNCVFQLLPCPE 418
S+ F L+ PE
Sbjct: 449 HLSDV-------GTTFNLILMPE 464
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 37/202 (18%)
Query: 247 EEPCRNIMGVMFH-GYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGEKDQQSVD 305
+E R ++ +F G +TT+ + L + H D+Q ++ EI + +
Sbjct: 270 DENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQA 329
Query: 306 NMLLLLATIYESAR---LLPAGPFLQRCSLKHGNAEEYVDPRQSSFVLN----------- 351
+M A I+E R ++P G + + + + + P+ ++ + N
Sbjct: 330 HMPYTTAVIHEVQRFGDIVPLG--VTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVW 387
Query: 352 ------DPNN----------NAAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQ 395
P + AFLPF +G RAC+G+ + F SLL+ + +
Sbjct: 388 EKPFRFHPEHFLDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVP 447
Query: 396 PGSEKNPKPTVNNCVFQLLPCP 417
G P+P+ ++ VF L P
Sbjct: 448 TG---QPRPS-HHGVFAFLVSP 465
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Query: 340 YVDPRQSSFVLNDPNNNAAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQ--PG 397
Y PRQ + N ++PFG+G CVG + I +F+ LL YE + P
Sbjct: 370 YEQPRQEDLL-----NRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPE 424
Query: 398 SEKN 401
S +N
Sbjct: 425 SYRN 428
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Query: 340 YVDPRQSSFVLNDPNNNAAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQ--PG 397
Y PRQ + N ++PFG+G CVG + I +F+ LL YE + P
Sbjct: 370 YEQPRQEDLL-----NRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPE 424
Query: 398 SEKN 401
S +N
Sbjct: 425 SYRN 428
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Query: 340 YVDPRQSSFVLNDPNNNAAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQ--PG 397
Y PRQ + N ++PFG+G CVG + I +F+ LL YE + P
Sbjct: 370 YEQPRQEDLL-----NRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPE 424
Query: 398 SEKN 401
S +N
Sbjct: 425 SYRN 428
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Query: 340 YVDPRQSSFVLNDPNNNAAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQ--PG 397
Y PRQ + N ++PFG+G CVG + I +F+ LL YE + P
Sbjct: 370 YEQPRQEDLL-----NRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPE 424
Query: 398 SEKN 401
S +N
Sbjct: 425 SYRN 428
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 80/204 (39%), Gaps = 34/204 (16%)
Query: 252 NIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGEKDQQSVDNMLLLL 311
N + + F G TT+ + + + + E++Y EI + M
Sbjct: 272 NTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYTE 331
Query: 312 ATIYESAR---LLPAGPFLQRCSLKHGNAEEYVDPRQS------SFVLNDPN-------- 354
A IYE R LLP G + +H + Y+ P+ + S L+DP+
Sbjct: 332 AVIYEIQRFSDLLPMG--VPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAF 389
Query: 355 --------NNA-----AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKN 401
N A AF+PF G R C+G+ + F ++L+ + + P + ++
Sbjct: 390 NPDHFLDANGALKKTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNFSM-ASPVAPED 448
Query: 402 PKPTVNNC-VFQLLPCPEIDFVER 424
T C V ++ P +I F+ R
Sbjct: 449 IDLTPQECGVGKIPPTYQIRFLPR 472
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 82/438 (18%), Positives = 168/438 (38%), Gaps = 70/438 (15%)
Query: 10 LAESHEKYGSVVKLWLGPTKLLVSIKEPALIKEMLSKAEDKPPLTGRA----FRLAFGQS 65
L + E+YG V + LGP +++V A+ + ++ +AE+ +GR F F
Sbjct: 36 LMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEE---FSGRGEQATFDWVFKGY 92
Query: 66 SLFASTFDRVKK-RRVTLSTELNGRLLERGKVIPARVVDCLMERIHDILGKG--NISCKM 122
+ S +R K+ RR +++T + + +RG I R+ + I + G G NI
Sbjct: 93 GVVFSNGERAKQLRRFSIATLRDFGVGKRG--IEERIQEEAGFLIDALRGTGGANIDPTF 150
Query: 123 ISQHMAFSLLGATIFGDEFFAWSKATVYEELFMTIAKDACFWASYSVTPFWKRGFWRYQH 182
+++ + +FGD F K F+++ + ++ T +
Sbjct: 151 FLSRTVSNVISSIVFGDRFDYKDKE------FLSLLRMMLGIFQFTSTSTGQ-------- 196
Query: 183 LCEKLKCLTQDIIQQCQRNCKLISGMDHNFDNETAYKRMEAALGGSSSF--DALVSQEPS 240
L E + + + Q+ +L+ G++ + + + F L+ +
Sbjct: 197 LYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEE 256
Query: 241 GYLQAREEPCRNIMGVMFHGYLTTAGLVGNILAR----LATHQDIQEKIYSEIIMARKGL 296
E +N++ + ++ V L L H +++ K++ EI + +
Sbjct: 257 EKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEI---DRVI 313
Query: 297 GEKDQQSVDN---MLLLLATIYESARLLPAGPF-LQRCSLKHGNAEEYVDPRQSSF---- 348
G+ Q ++ M + A I+E R P L R K ++ P+ +
Sbjct: 314 GKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPML 373
Query: 349 --VLNDPN---------------------NNAAFLPFGSGSRACVGQKYVTQGIATLFAS 385
VL DP+ + AF+PF G R C G+ + F +
Sbjct: 374 GSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTT 433
Query: 386 LLERYEIRLQPGSEKNPK 403
+++ + ++ S ++PK
Sbjct: 434 VMQNFRLK----SSQSPK 447
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 82/438 (18%), Positives = 167/438 (38%), Gaps = 70/438 (15%)
Query: 10 LAESHEKYGSVVKLWLGPTKLLVSIKEPALIKEMLSKAEDKPPLTGRA----FRLAFGQS 65
L + E+YG V + LGP +++V A+ + ++ +AE+ +GR F F
Sbjct: 36 LMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEE---FSGRGEQATFDWVFKGY 92
Query: 66 SLFASTFDRVKK-RRVTLSTELNGRLLERGKVIPARVVDCLMERIHDILGKG--NISCKM 122
+ S +R K+ RR +++T + + +RG I R+ + I + G G NI
Sbjct: 93 GVVFSNGERAKQLRRFSIATLRDFGVGKRG--IEERIQEEAGFLIDALRGTGGANIDPTF 150
Query: 123 ISQHMAFSLLGATIFGDEFFAWSKATVYEELFMTIAKDACFWASYSVTPFWKRGFWRYQH 182
+++ + +FGD F K F+++ + ++ T +
Sbjct: 151 FLSRTVSNVISSIVFGDRFDYKDKE------FLSLLRMMLGIFQFTSTSTGQ-------- 196
Query: 183 LCEKLKCLTQDIIQQCQRNCKLISGMDHNFDNETAYKRMEAALGGSSSF--DALVSQEPS 240
L E + + + Q+ +L+ G++ + + + F L+ +
Sbjct: 197 LYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEE 256
Query: 241 GYLQAREEPCRNIMGVMFHGYLTTAGLVGNILAR----LATHQDIQEKIYSEIIMARKGL 296
E +N++ ++ V L L H +++ K++ EI + +
Sbjct: 257 EKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEI---DRVI 313
Query: 297 GEKDQQSVDN---MLLLLATIYESARLLPAGPF-LQRCSLKHGNAEEYVDPRQSSF---- 348
G+ Q ++ M + A I+E R P L R K ++ P+ +
Sbjct: 314 GKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPML 373
Query: 349 --VLNDPN---------------------NNAAFLPFGSGSRACVGQKYVTQGIATLFAS 385
VL DP+ + AF+PF G R C G+ + F +
Sbjct: 374 GSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTT 433
Query: 386 LLERYEIRLQPGSEKNPK 403
+++ + ++ S ++PK
Sbjct: 434 VMQNFRLK----SSQSPK 447
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 28/171 (16%)
Query: 252 NIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGEKDQQSVDNML-LL 310
NI ++ G TT+ + L +A ++QE + E++ AR+ E D + M+ LL
Sbjct: 280 NITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQ-AEGDISKMLQMVPLL 338
Query: 311 LATIYESARLLPAGPFLQRCSLKHGNAEEYVDP-------------RQSSFVLN----DP 353
A+I E+ RL P LQR ++Y+ P R +F + DP
Sbjct: 339 KASIKETLRLHPISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPDKFDP 398
Query: 354 NN---------NAAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQ 395
+ L FG G R CVG++ + +LE +++ +Q
Sbjct: 399 TRWLSKDKDLIHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKVEMQ 449
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 35/177 (19%)
Query: 259 HGYLTTAGLVGNILARLATHQDIQEKIYSE-IIMARKGLGEKDQQSVDNMLLLLATIYES 317
H TT+ +G LAR T +Q+K Y E + + L + ++ LL I E+
Sbjct: 266 HTSSTTSAWMGFFLARDKT---LQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKET 322
Query: 318 ARLLP---------------AG----PFLQRCSLKHGNAE------EYVDPRQSSFVLND 352
RL P AG P Q C N E +D ++ ++
Sbjct: 323 LRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDN 382
Query: 353 PNNNA--AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTVN 407
P + A++PFG+G C+G+ + I T+++++L YE L G PTVN
Sbjct: 383 PASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLIDGY----FPTVN 435
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 82/438 (18%), Positives = 167/438 (38%), Gaps = 70/438 (15%)
Query: 10 LAESHEKYGSVVKLWLGPTKLLVSIKEPALIKEMLSKAEDKPPLTGRA----FRLAFGQS 65
L + E+YG V + LGP +++V A+ + ++ +AE+ +GR F F
Sbjct: 36 LMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEE---FSGRGEQATFDWVFKGY 92
Query: 66 SLFASTFDRVKK-RRVTLSTELNGRLLERGKVIPARVVDCLMERIHDILGKG--NISCKM 122
+ S +R K+ RR +++T + + +RG I R+ + I + G G NI
Sbjct: 93 GVVFSNGERAKQLRRFSIATLRDFGVGKRG--IEERIQEEAGFLIDALRGTGGANIDPTF 150
Query: 123 ISQHMAFSLLGATIFGDEFFAWSKATVYEELFMTIAKDACFWASYSVTPFWKRGFWRYQH 182
+++ + +FGD F K F+++ + ++ T +
Sbjct: 151 FLSRTVSNVISSIVFGDRFDYKDKE------FLSLLRMMLGIFQFTSTSTGQ-------- 196
Query: 183 LCEKLKCLTQDIIQQCQRNCKLISGMDHNFDNETAYKRMEAALGGSSSF--DALVSQEPS 240
L E + + + Q+ +L+ G++ + + + F L+ +
Sbjct: 197 LYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEE 256
Query: 241 GYLQAREEPCRNIMGVMFHGYLTTAGLVGNILAR----LATHQDIQEKIYSEIIMARKGL 296
E +N++ ++ V L L H +++ K++ EI + +
Sbjct: 257 EKNPNTEFYLKNLVMTTLQLFVGGTETVSTTLRYGFLLLMKHPEVEAKVHEEI---DRVI 313
Query: 297 GEKDQQSVDN---MLLLLATIYESARLLPAGPF-LQRCSLKHGNAEEYVDPRQSSF---- 348
G+ Q ++ M + A I+E R P L R K ++ P+ +
Sbjct: 314 GKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPML 373
Query: 349 --VLNDPN---------------------NNAAFLPFGSGSRACVGQKYVTQGIATLFAS 385
VL DP+ + AF+PF G R C G+ + F +
Sbjct: 374 GSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTT 433
Query: 386 LLERYEIRLQPGSEKNPK 403
+++ + ++ S ++PK
Sbjct: 434 VMQNFRLK----SSQSPK 447
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 389 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 389 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 389 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 389 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 389 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 389 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 389 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 389 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 390 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 438
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 389 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 81/438 (18%), Positives = 166/438 (37%), Gaps = 70/438 (15%)
Query: 10 LAESHEKYGSVVKLWLGPTKLLVSIKEPALIKEMLSKAEDKPPLTGRA----FRLAFGQS 65
L + E+YG V + LGP +++V A+ + ++ +AE+ +GR F F
Sbjct: 36 LMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEE---FSGRGEQATFDWVFKGY 92
Query: 66 SLFASTFDRVKK-RRVTLSTELNGRLLERGKVIPARVVDCLMERIHDILGKG--NISCKM 122
+ S +R K+ RR +++T + + +RG I R+ + I + G G NI
Sbjct: 93 GVVFSNGERAKQLRRFSIATLRDFGVGKRG--IEERIQEEAGFLIDALRGTGGANIDPTF 150
Query: 123 ISQHMAFSLLGATIFGDEFFAWSKATVYEELFMTIAKDACFWASYSVTPFWKRGFWRYQH 182
+++ + +FGD F K F+++ + ++ T +
Sbjct: 151 FLSRTVSNVISSIVFGDRFDYKDKE------FLSLLRMMLGIFQFTSTSTGQ-------- 196
Query: 183 LCEKLKCLTQDIIQQCQRNCKLISGMDHNFDNETAYKRMEAALGGSSSF--DALVSQEPS 240
L E + + + Q+ + + G++ + + + F L+ +
Sbjct: 197 LYEMFSSVMKHLPGPQQQAFQCLQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEE 256
Query: 241 GYLQAREEPCRNIMGVMFHGYLTTAGLVGNILAR----LATHQDIQEKIYSEIIMARKGL 296
E +N++ ++ V L L H +++ K++ EI + +
Sbjct: 257 EKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEI---DRVI 313
Query: 297 GEKDQQSVDN---MLLLLATIYESARLLPAGPF-LQRCSLKHGNAEEYVDPRQSSF---- 348
G+ Q ++ M + A I+E R P L R K ++ P+ +
Sbjct: 314 GKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPML 373
Query: 349 --VLNDPN---------------------NNAAFLPFGSGSRACVGQKYVTQGIATLFAS 385
VL DP+ + AF+PF G R C G+ + F +
Sbjct: 374 GSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDAFVPFSIGKRNCFGEGLARMELFLFFTT 433
Query: 386 LLERYEIRLQPGSEKNPK 403
+++ + ++ S ++PK
Sbjct: 434 VMQNFRLK----SSQSPK 447
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 389 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 392 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 440
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 389 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 389 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 390 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 438
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 389 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 389 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 392 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 440
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 390 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 438
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 390 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 438
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 389 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 392 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 440
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 390 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 438
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 389 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 389 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 389 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 389 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 389 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 389 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 390 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 438
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 389 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 395 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 443
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPT 405
AF PFG+G RAC+GQ++ + +L+ ++ E + K T
Sbjct: 389 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKET 436
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYE 391
AF PFG+G RAC+GQ++ + +L+ ++
Sbjct: 390 AFKPFGNGQRACIGQQFALHEATLVLGMMLKHFD 423
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 69/180 (38%), Gaps = 43/180 (23%)
Query: 252 NIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGE---------KDQQ 302
+++ + G TTA + +A L H +IQ ++ E+ + LG KD+
Sbjct: 283 SVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEEL---DRELGPGASCSRVTYKDRA 339
Query: 303 SVDNMLLLLATIYESARLLPAGPF--------------------------LQRCSLKHGN 336
+ LL ATI E RL P P LQ L
Sbjct: 340 RLP---LLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETV 396
Query: 337 AEEYVDPRQSSFVLNDPNNNAAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQP 396
E+ + R F+ +P N + L FG G+R C+G+ + + A LL+ + + P
Sbjct: 397 WEQPHEFRPDRFL--EPGANPSALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPP 454
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF P+G+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 389 AFKPYGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 35.0 bits (79), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 88/450 (19%), Positives = 170/450 (37%), Gaps = 77/450 (17%)
Query: 15 EKYGSVVKLWLGPTKLLVSIKEPALIKEMLSKAEDKPPLTGRA----FRLAFGQSSLFAS 70
E+YG V + LGP +++V A+ + ++ +AE+ +GR F F + S
Sbjct: 41 ERYGPVFTIHLGPRRVVVLCGHDAVKEALVDQAEE---FSGRGEQATFDWLFKGYGVAFS 97
Query: 71 TFDRVKK-RRVTLSTELNGRLLERGKVIPARVVD---CLMERIHDILGKGNISCKMISQH 126
+R K+ RR +++T + +RG I R+ + L++ + G NI
Sbjct: 98 NGERAKQLRRFSIATLRGFGVGKRG--IEERIQEEAGFLIDALRGTHG-ANIDPTFFLSR 154
Query: 127 MAFSLLGATIFGD-------EFFAWSKATVYEELFMTIAKDACFWASYSVTPFWKRGFWR 179
+++ + +FGD EF + + + F + + SV K
Sbjct: 155 TVSNVISSIVFGDRFDYEDKEFLSLLRMMLGSFQFTATSTGQLYEMFSSV---MKHLPGP 211
Query: 180 YQHLCEKLKCLTQDIIQQCQRNCK-LISGMDHNFDNETAYKRMEAALGGSSSFDALVSQE 238
Q ++L+ L I ++ + N + L +F + + E ++ F
Sbjct: 212 QQQAFKELQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEF------- 264
Query: 239 PSGYLQAREEPCRNIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGE 298
YL+ + + F G T + + L H +++ K++ EI + +G+
Sbjct: 265 ---YLKNL---VMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEI---DRVIGK 315
Query: 299 KDQQSVDN---MLLLLATIYESAR---LLPAGPFLQRCSLKHGNAEEYVDPRQSSF---- 348
Q ++ M A I+E R +LP G L K ++ P+ +
Sbjct: 316 NRQPKFEDRAKMPYTEAVIHEIQRFGDMLPMG--LAHRVNKDTKFRDFFLPKGTEVFPML 373
Query: 349 --VLNDP---------------------NNNAAFLPFGSGSRACVGQKYVTQGIATLFAS 385
VL DP + AF+PF G R C G+ + F +
Sbjct: 374 GSVLRDPRFFSNPRDFNPQHFLDKKGQFKKSDAFVPFSIGKRYCFGEGLARMELFLFFTT 433
Query: 386 LLERYEIRLQPGSEKNPKPTVNNCVFQLLP 415
+++ + + P S K+ + + F +P
Sbjct: 434 IMQNFRFK-SPQSPKDIDVSPKHVGFATIP 462
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC+G+++ + +L+ ++ E + K T+
Sbjct: 389 AFKPFGNGQRACIGKQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF P+G+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 389 AFKPWGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC GQ++ + +L+ ++ E + K T+
Sbjct: 390 AFKPFGNGQRACPGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 438
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 14/98 (14%)
Query: 332 LKHGNAEEYVDP--------------RQSSFVLNDPNNNAAFLPFGSGSRACVGQKYVTQ 377
L H + E Y DP +++F N ++PFGSG+ C G+ +
Sbjct: 376 LMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIH 435
Query: 378 GIATLFASLLERYEIRLQPGSEKNPKPTVNNCVFQLLP 415
I +L +E+ L G K P + +LP
Sbjct: 436 EIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLGILP 473
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 14/98 (14%)
Query: 332 LKHGNAEEYVDP--------------RQSSFVLNDPNNNAAFLPFGSGSRACVGQKYVTQ 377
L H + E Y DP +++F N ++PFGSG+ C G+ +
Sbjct: 376 LMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIH 435
Query: 378 GIATLFASLLERYEIRLQPGSEKNPKPTVNNCVFQLLP 415
I +L +E+ L G K P + +LP
Sbjct: 436 EIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLGILP 473
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF PFG+G RAC GQ++ + +L+ ++ E + K T+
Sbjct: 389 AFKPFGNGQRACEGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF P G+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 389 AFKPHGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTV 406
AF P G+G RAC+GQ++ + +L+ ++ E + K T+
Sbjct: 389 AFKPAGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETL 437
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 73/177 (41%), Gaps = 22/177 (12%)
Query: 233 ALVSQEPSGYLQAREEPCRNIMGVMFHGYLTTAG-LVGNILA---------RLATHQDIQ 282
++++ P+ EE N++ ++ G TT + G +LA +L + +
Sbjct: 239 SMLAHSPATRNMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKANPALV 298
Query: 283 EKIYSEIIMARKGLGEKDQQSVDNMLLLLATIYESARLLPAGPFLQRCSLKHGNAEEYVD 342
E + EII + L + ++ + L TI + +++ GN ++ V
Sbjct: 299 ETMVPEIIRWQTPLAHMRRTAIADSELGGKTIRKGDKVV--------MWYYSGNRDDEVI 350
Query: 343 PRQSSFVLNDPNNNAAFLPFGSGSRACVGQKYVTQGIATLFASLLERY---EIRLQP 396
R F+++ P L FG G CVG + + L+ +L R+ E+ +P
Sbjct: 351 DRPEEFIIDRPRPRQ-HLSFGFGIHRCVGNRLAEMQLRILWEEILTRFSRIEVMAEP 406
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 64/172 (37%), Gaps = 34/172 (19%)
Query: 252 NIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGEKDQQSVDN---ML 308
++ + F G TT+ + + + + E++ EI + +G ++D+ M
Sbjct: 272 TVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEI---EQVIGSHRPPALDDRAKMP 328
Query: 309 LLLATIYESARLLPAGPF-LQRCSLKHGNAEEYVDPRQS------SFVLNDP-------- 353
A I+E RL PF + K YV P+ + S L+DP
Sbjct: 329 YTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNT 388
Query: 354 -------------NNNAAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEI 392
N F+PF G R C+G+ + F ++L+ + I
Sbjct: 389 FNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSI 440
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 64/172 (37%), Gaps = 34/172 (19%)
Query: 252 NIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGEKDQQSVDN---ML 308
++ + F G TT+ + + + + E++ EI + +G ++D+ M
Sbjct: 272 TVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEI---EQVIGSHRPPALDDRAKMP 328
Query: 309 LLLATIYESARLLPAGPF-LQRCSLKHGNAEEYVDPRQS------SFVLNDP-------- 353
A I+E RL PF + K YV P+ + S L+DP
Sbjct: 329 YTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNT 388
Query: 354 -------------NNNAAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEI 392
N F+PF G R C+G+ + F ++L+ + I
Sbjct: 389 FNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSI 440
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 64/172 (37%), Gaps = 34/172 (19%)
Query: 252 NIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGEKDQQSVDN---ML 308
++ + F G TT+ + + + + E++ EI + +G ++D+ M
Sbjct: 272 TVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEI---EQVIGSHRPPALDDRAKMP 328
Query: 309 LLLATIYESARLLPAGPF-LQRCSLKHGNAEEYVDPRQS------SFVLNDP-------- 353
A I+E RL PF + K YV P+ + S L+DP
Sbjct: 329 YTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNT 388
Query: 354 -------------NNNAAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEI 392
N F+PF G R C+G+ + F ++L+ + I
Sbjct: 389 FNPGHFLDANGALKRNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSI 440
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Query: 360 LPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTVNNCVF 411
L FG G +C GQ T+FA L ERYE R++ E PTV + F
Sbjct: 336 LSFGLGPHSCAGQIISRAEATTVFAVLAERYE-RIELAEE----PTVAHNDF 382
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 63/172 (36%), Gaps = 34/172 (19%)
Query: 252 NIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEIIMARKGLGEKDQQSVDN---ML 308
++ + F G TT+ + + + + E++ EI + +G ++D+ M
Sbjct: 272 TVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEI---EQVIGSHRPPALDDRAKMP 328
Query: 309 LLLATIYESARLLPAGPF-LQRCSLKHGNAEEYVDPRQS------SFVLNDP-------- 353
A I+E RL PF + K YV P+ + S L+DP
Sbjct: 329 YTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNT 388
Query: 354 -------------NNNAAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEI 392
N F+PF G R C G+ + F ++L+ + I
Sbjct: 389 FNPGHFLDANGALKRNEGFMPFSLGKRICAGEGIARTELFLFFTTILQNFSI 440
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Query: 360 LPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTVNNCVF 411
L FG G +C GQ T+FA L ERYE R++ E PTV + F
Sbjct: 334 LSFGLGPHSCAGQIISRAEATTVFAVLAERYE-RIELAEE----PTVAHNDF 380
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
Query: 320 LLPAGP--FLQRCSLKHGNAE----EYVDPRQSSFVLNDPNN---NAAFLPFGSGSRACV 370
L+P G + S+ H N E E DP L++ N + F+PF +G R CV
Sbjct: 363 LIPKGTTILISLTSVLHDNKEFPNPEMFDPHH---FLDEGGNFKKSKYFMPFSAGKRICV 419
Query: 371 GQKYVTQGIATLFASLLERYEIR 393
G+ + S+L+ + ++
Sbjct: 420 GEALAGMELFLFLTSILQNFNLK 442
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
Query: 320 LLPAGP--FLQRCSLKHGNAE----EYVDPRQSSFVLNDPNN---NAAFLPFGSGSRACV 370
L+P G + S+ H N E E DP L++ N + F+PF +G R CV
Sbjct: 361 LIPKGTTILISLTSVLHDNKEFPNPEMFDPHH---FLDEGGNFKKSKYFMPFSAGKRICV 417
Query: 371 GQKYVTQGIATLFASLLERYEIR 393
G+ + S+L+ + ++
Sbjct: 418 GEALAGMELFLFLTSILQNFNLK 440
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 61/148 (41%), Gaps = 25/148 (16%)
Query: 256 VMFHGYLTTAGLVG-NILARLATHQDIQEKIYSEIIMARKGLGEKDQQSVDNMLLLLATI 314
VM G +G++G +LA L + E I A +G + Q++VD ++ L
Sbjct: 233 VMLAGDDNISGMIGLGVLAMLR---------HPEQIDAFRGDEQSAQRAVDELIRYLTVP 283
Query: 315 YES----AR--LLPAGPFLQR-----CSLKHGNAEEYVDPRQSSF-VLNDPNNNAAFLPF 362
Y AR L AG +++ CSL N + + P V +P + AF
Sbjct: 284 YSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTREPIPHVAF--- 340
Query: 363 GSGSRACVGQKYVTQGIATLFASLLERY 390
G G C+G + T+F L R+
Sbjct: 341 GHGVHHCLGAALARLELRTVFTELWRRF 368
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Query: 320 LLPAGPFL--QRCSLKHGNAE----EYVDPRQSSFVLNDPNNNAAFLPFGSGSRACVGQK 373
L+P G + S+ H N E E DPR + + F+PF +G R CVG+
Sbjct: 363 LIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNFKKSNYFMPFSAGKRICVGEG 422
Query: 374 YVTQGIATLFASLLERYEIR-LQPGSEKNPKPTVN 407
+ +L+ + ++ L + + P VN
Sbjct: 423 LARMELFLFLTFILQNFNLKSLIDPKDLDTTPVVN 457
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 34/172 (19%)
Query: 253 IMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEI---IMARKGLGEKDQQSVDNMLL 309
+ + F G TT+ + L L + +I+EK++ EI I + KD+Q + M
Sbjct: 272 VADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDA 331
Query: 310 LLATI------------YESAR-------LLPAG----PFLQRCSLKHGNAEEYVDPRQ- 345
++ I +E+ R L+P G P L S+ + N +E+ DP +
Sbjct: 332 VVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLD--SVLYDN-QEFPDPEKF 388
Query: 346 -SSFVLNDPNN---NAAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIR 393
LN+ + F PF +G R C G+ + L ++L+ + ++
Sbjct: 389 KPEHFLNENGKFKYSDYFKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLK 440
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 356 NAAFLPFGSGSRACVGQKYVTQGIATLFASLLERYEI 392
N F+PF G R C+G+ + F ++L+ + I
Sbjct: 404 NEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSI 440
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTVNNCVFQLLPCP 417
A +PF G R C+G+ + F +LL+R+ + + KP + L P P
Sbjct: 411 ALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLG---MTLQPQP 467
Query: 418 EIDFVER 424
+ ER
Sbjct: 468 YLICAER 474
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 89/448 (19%), Positives = 160/448 (35%), Gaps = 72/448 (16%)
Query: 10 LAESHEKYGSVVKLWLGPTKLLVSIKEPALIKEMLSKAED---KPPLTGRAFRLAFGQSS 66
L+ ++YG V+++ +G T +LV + + + ++ + +D +P L + GQS
Sbjct: 41 LSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTL-ITDGQSL 99
Query: 67 LFASTFDRV-KKRRVTLSTELNGRLLERGKVIPARVVDCLME------------RIHDIL 113
F++ V RR LN + PA C +E R+ +++
Sbjct: 100 TFSTDSGPVWAARRRLAQNALNTFSIASD---PASSSSCYLEEHVSKEAKALISRLQELM 156
Query: 114 -GKGNISCKMISQHMAFSLLGATIFGDEFFAWSKATVYEELFMTIAKDACFWASYSV-TP 171
G G+ +++GA FG F S +E+ + F + S P
Sbjct: 157 AGPGHFDPYNQVVVSVANVIGAMCFGQHFPESS-----DEMLSLVKNTHEFVETASSGNP 211
Query: 172 FWKRGFWRY--QHLCEKLKCLTQDIIQQCQRNCKLISGMDHNFDNETAYKRMEAALGGSS 229
RY ++ K Q + Q K + +FD + A S
Sbjct: 212 LDFFPILRYLPNPALQRFKAFNQRFLWFLQ---KTVQEHYQDFDKNSVRDITGALFKHSK 268
Query: 230 SFDALVSQEPSGYLQAREEPCRNIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIYSEI 289
SG L +E+ + + G+ T + L L T +IQ KI E+
Sbjct: 269 K-----GPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKEL 323
Query: 290 --IMARKGLGE-KDQQSVDNMLLLLATIYESARLLPAG---------------------P 325
++ R+ D+ + + + + + LP
Sbjct: 324 DTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCV 383
Query: 326 FLQRCSLKHGNAEEYVDP---RQSSFV------LNDPNNNAAFLPFGSGSRACVGQKYVT 376
F+ + + H + E + DP R F+ +N P + L FG G R C+G+
Sbjct: 384 FVNQWQVNH-DPELWEDPSEFRPERFLTADGTAINKPLSEKMML-FGMGKRRCIGEVLAK 441
Query: 377 QGIATLFASLLERYEIRLQPGSEKNPKP 404
I A LL++ E + PG + + P
Sbjct: 442 WEIFLFLAILLQQLEFSVPPGVKVDLTP 469
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Query: 358 AFLPFGSGSRACVGQKYVTQGIATLFASLLERYEIRLQPGSEKNPKPTVNNCVFQLLPCP 417
A +PF G R C+G+ + F +LL+R+ + + KP + L P P
Sbjct: 411 ALVPFSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLG---MTLQPQP 467
Query: 418 EIDFVER 424
+ ER
Sbjct: 468 YLICAER 474
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 359 FLPFGSGSRACVGQKYVTQGIATLFASLLERYEIR 393
F+PF +G R CVG+ + S+L+ ++++
Sbjct: 404 FMPFSAGKRMCVGEGLARMELFLFLTSILQNFKLQ 438
>pdb|2FHI|A Chain A, Substrate Analog (Ib2) Complex With The His 96 Asn
Substitution Of The Fragile Histidine Triad Protein,
Fhit
Length = 147
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 75 VKKRRVTLSTELNGRLLERGKVIPARVVDCLM---ERIHDI 112
+K V L TEL+ L+ R V+P V+ C + ER HD+
Sbjct: 10 IKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDL 50
>pdb|1FHI|A Chain A, Substrate Analog (Ib2) Complex With The Fragile Histidine
Triad Protein, Fhit
pdb|4FIT|A Chain A, Fhit-Apo
pdb|6FIT|A Chain A, Fhit-Transition State Analog
Length = 147
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 75 VKKRRVTLSTELNGRLLERGKVIPARVVDCLM---ERIHDI 112
+K V L TEL+ L+ R V+P V+ C + ER HD+
Sbjct: 10 IKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDL 50
>pdb|3FIT|A Chain A, Fhit (Fragile Histidine Triad Protein) In Complex With
AdenosineSULFATE AMP ANALOG
pdb|1FIT|A Chain A, Fhit (Fragile Histidine Triad Protein)
pdb|2FIT|A Chain A, Fhit (Fragile Histidine Triad Protein)
pdb|5FIT|A Chain A, Fhit-Substrate Analog
Length = 147
Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 75 VKKRRVTLSTELNGRLLERGKVIPARVVDCLM---ERIHDI 112
+K V L TEL+ L+ R V+P V+ C + ER HD+
Sbjct: 10 IKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDL 50
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 232 DALVSQ-----EPSGYLQAREEPCRNIMGVMFHGYLTTAGLVGNILARLATHQDIQEKIY 286
DAL+S + G ++EE M ++ G+ TT L+GN + L TH D Q K+
Sbjct: 204 DALLSSLLAVSDEDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPD-QRKLL 262
Query: 287 SE 288
+E
Sbjct: 263 AE 264
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,312,821
Number of Sequences: 62578
Number of extensions: 484259
Number of successful extensions: 1189
Number of sequences better than 100.0: 110
Number of HSP's better than 100.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 1062
Number of HSP's gapped (non-prelim): 141
length of query: 426
length of database: 14,973,337
effective HSP length: 102
effective length of query: 324
effective length of database: 8,590,381
effective search space: 2783283444
effective search space used: 2783283444
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)