BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014344
(426 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 159/356 (44%), Gaps = 85/356 (23%)
Query: 14 DFSCLRIVSALGRGAKGVVFLVKDVESSES---FALKVIWRDLIEKKSKELTNNDNGDKY 70
D S ++ LG+G+ G VFLVK + S++ +A+KV+ + ++ + +
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDR----------- 70
Query: 71 RRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R E+ +L V HP + +L T+ + +D+ G DL + + E MF+++ +
Sbjct: 71 VRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFT--RLSKEVMFTEEDV 128
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
+F H++GI+YRDLKPENI++ E GHI
Sbjct: 129 KFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHI----------------------- 165
Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEY 250
K G+S E H F GT EY
Sbjct: 166 -----------------KLTDFGLSKESIDHEKKAYS----------------FCGTVEY 192
Query: 251 VAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL 310
+APE++ +GH + DWWS GV++ EML G PF+G RKET IL +G P L
Sbjct: 193 MAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK---LGMPQFL 249
Query: 311 ----RNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNWELLLKIS-RPPNIPA 356
++L+R L +++P R+ GVEEIK H FF ++W L + PP PA
Sbjct: 250 SPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKPA 305
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/351 (31%), Positives = 160/351 (45%), Gaps = 81/351 (23%)
Query: 14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
DF L+++ G+G+ G V L + +A+KV+ + I KK +E + I
Sbjct: 39 DFHFLKVI---GKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEE----------KHI 85
Query: 74 SFEQRV-LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
E+ V L+NV+HP L L T + + +DY G +L Q E+ F + RF
Sbjct: 86 MSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL--FYHLQRERCFLEPRARF 143
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
H++ IVYRDLKPENI++ GHI+L DF L K +
Sbjct: 144 YAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLC------------KENIE 191
Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVA 252
N+ + S FC GT EY+A
Sbjct: 192 HNSTT---------STFC-----------------------------------GTPEYLA 207
Query: 253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT-PLR 311
PE++ + +D VDWW LG VL+EMLYG PF + E + IL +P L T R
Sbjct: 208 PEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSAR 267
Query: 312 NLIRRLLEKDPTKRIGVE----EIKGHEFFKGVNWELLL--KISRP--PNI 354
+L+ LL+KD TKR+G + EIK H FF +NW+ L+ KI+ P PN+
Sbjct: 268 HLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKITPPFNPNV 318
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 169/356 (47%), Gaps = 86/356 (24%)
Query: 20 IVSALGRGAKGVVFLVKDVESSES---FALKVIWRDLIEKKSKELTNNDNGDKYRRISFE 76
++ LG GA G VFLV+ + ++ +A+KV+ + I +K+K + E
Sbjct: 58 LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRT---------E 108
Query: 77 QRVLRNV-EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++VL ++ + P L L T+ + +DY G +L + Q+ + F++ ++
Sbjct: 109 RQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVG 166
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
H +GI+YRD+K ENI++ NGH++L DF LS K +A T
Sbjct: 167 EIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS------------KEFVADET 214
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
R++ FC GT EY+AP+I
Sbjct: 215 ------ERAY--DFC-----------------------------------GTIEYMAPDI 231
Query: 256 IEG--KGHDFAVDWWSLGVVLHEMLYGATPF----RGSSRKETFYRILCRPPDLVGEPTP 309
+ G GHD AVDWWSLGV+++E+L GA+PF +S+ E RIL P E +
Sbjct: 232 VRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSA 291
Query: 310 L-RNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWELLLKISRPPNIPARFE 359
L ++LI+RLL KDP KR+G +EIK H FF+ +NW+ L +PA F+
Sbjct: 292 LAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDL----AAKKVPAPFK 343
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 151/349 (43%), Gaps = 78/349 (22%)
Query: 14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
DF L++ LG+G G V LV++ + +A+K++ +++I K D+
Sbjct: 9 DFDYLKL---LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------DEVAHT 55
Query: 74 SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFX 133
E RVL+N HP L L+ T + + ++Y G +L E++F+++ RF
Sbjct: 56 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY 113
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
H+ +VYRD+K EN+M+ ++GHI + DF L
Sbjct: 114 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL------------------- 154
Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAP 253
C GIS F GT EY+AP
Sbjct: 155 ----------------CKEGIS---------------------DGATMKTFCGTPEYLAP 177
Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRN 312
E++E + AVDWW LGVV++EM+ G PF + F IL +P ++
Sbjct: 178 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS 237
Query: 313 LIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWE-LLLKISRPPNIP 355
L+ LL+KDP +R+G +E+ H FF +NW+ ++ K PP P
Sbjct: 238 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKP 286
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 151/349 (43%), Gaps = 78/349 (22%)
Query: 14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
DF L++ LG+G G V LV++ + +A+K++ +++I K D+
Sbjct: 6 DFDYLKL---LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------DEVAHT 52
Query: 74 SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFX 133
E RVL+N HP L L+ T + + ++Y G +L E++F+++ RF
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY 110
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
H+ +VYRD+K EN+M+ ++GHI + DF L
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL------------------- 151
Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAP 253
C GIS F GT EY+AP
Sbjct: 152 ----------------CKEGIS---------------------DGATMKTFCGTPEYLAP 174
Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRN 312
E++E + AVDWW LGVV++EM+ G PF + F IL +P ++
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS 234
Query: 313 LIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWE-LLLKISRPPNIP 355
L+ LL+KDP +R+G +E+ H FF +NW+ ++ K PP P
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKP 283
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 151/349 (43%), Gaps = 78/349 (22%)
Query: 14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
DF L++ LG+G G V LV++ + +A+K++ +++I K D+
Sbjct: 6 DFDYLKL---LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------DEVAHT 52
Query: 74 SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFX 133
E RVL+N HP L L+ T + + ++Y G +L E++F+++ RF
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY 110
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
H+ +VYRD+K EN+M+ ++GHI + DF L
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL------------------- 151
Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAP 253
C GIS F GT EY+AP
Sbjct: 152 ----------------CKEGIS---------------------DGATMKTFCGTPEYLAP 174
Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRN 312
E++E + AVDWW LGVV++EM+ G PF + F IL +P ++
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS 234
Query: 313 LIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWE-LLLKISRPPNIP 355
L+ LL+KDP +R+G +E+ H FF +NW+ ++ K PP P
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKP 283
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 152/349 (43%), Gaps = 78/349 (22%)
Query: 14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
DF L++ LG+G G V LV++ + +A+K++ +++I K D+
Sbjct: 6 DFDYLKL---LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------DEVAHT 52
Query: 74 SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFX 133
E RVL+N HP L L+ T + + ++Y G +L E++F+++ RF
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY 110
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
H+ +VYRD+K EN+M+ ++GHI + DF L
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL------------------- 151
Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAP 253
C GIS F GT EY+AP
Sbjct: 152 ----------------CKEGIS---------------------DGATMKXFCGTPEYLAP 174
Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRN 312
E++E + AVDWW LGVV++EM+ G PF + F IL +P ++
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS 234
Query: 313 LIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWE-LLLKISRPPNIP 355
L+ LL+KDP +R+G +E+ H FF +NW+ ++ K PP P
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKP 283
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 152/349 (43%), Gaps = 78/349 (22%)
Query: 14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
DF L++ LG+G G V LV++ + +A+K++ +++I K D+
Sbjct: 6 DFDYLKL---LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------DEVAHT 52
Query: 74 SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFX 133
E RVL+N HP L L+ T + + ++Y G +L E++F+++ RF
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY 110
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
H+ +VYRD+K EN+M+ ++GHI + DF L
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL------------------- 151
Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAP 253
C GIS F GT EY+AP
Sbjct: 152 ----------------CKEGIS---------------------DGATMKXFCGTPEYLAP 174
Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRN 312
E++E + AVDWW LGVV++EM+ G PF + F IL +P ++
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS 234
Query: 313 LIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWE-LLLKISRPPNIP 355
L+ LL+KDP +R+G +E+ H FF +NW+ ++ K PP P
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKP 283
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 152/349 (43%), Gaps = 78/349 (22%)
Query: 14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
DF L++ LG+G G V LV++ + +A+K++ +++I K D+
Sbjct: 11 DFDYLKL---LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------DEVAHT 57
Query: 74 SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFX 133
E RVL+N HP L L+ T + + ++Y G +L E++F+++ RF
Sbjct: 58 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY 115
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
H+ +VYRD+K EN+M+ ++GHI + DF L
Sbjct: 116 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL------------------- 156
Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAP 253
C GIS F GT EY+AP
Sbjct: 157 ----------------CKEGIS---------------------DGATMKXFCGTPEYLAP 179
Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRN 312
E++E + AVDWW LGVV++EM+ G PF + F IL +P ++
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS 239
Query: 313 LIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWE-LLLKISRPPNIP 355
L+ LL+KDP +R+G +E+ H FF +NW+ ++ K PP P
Sbjct: 240 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKP 288
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 158/374 (42%), Gaps = 84/374 (22%)
Query: 8 RPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNG 67
+P + + + LG+G G V LVK+ + +A+K++ +++I K
Sbjct: 140 KPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK---------- 189
Query: 68 DKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD 127
D+ E RVL+N HP L L+ T + + ++Y G +L E++FS+
Sbjct: 190 DEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSE 247
Query: 128 DTIRFXXXXXXXXXXXXHN-MGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQAS 186
D RF H+ +VYRDLK EN+M+ ++GHI + DF L
Sbjct: 248 DRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL------------ 295
Query: 187 PKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVG 246
C GI F G
Sbjct: 296 -----------------------CKEGIK---------------------DGATMKTFCG 311
Query: 247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDL 303
T EY+APE++E + AVDWW LGVV++EM+ G PF ++ F IL R P
Sbjct: 312 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT 371
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWELLL-KISRPPNIPAR 357
+G ++L+ LL+KDP +R+G +EI H FF G+ W+ + K PP P
Sbjct: 372 LGPEA--KSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKP-- 427
Query: 358 FEHENNESDGRGRD 371
+E+D R D
Sbjct: 428 --QVTSETDTRYFD 439
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 152/349 (43%), Gaps = 78/349 (22%)
Query: 14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
DF L++ LG+G G V LV++ + +A+K++ +++I K D+
Sbjct: 6 DFDYLKL---LGKGTFGKVILVREKATGRYYAMKILRKEVIIAK----------DEVAHT 52
Query: 74 SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFX 133
E RVL+N HP L L+ T + + ++Y G +L E++F+++ RF
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFY 110
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
H+ +VYRD+K EN+M+ ++GHI + DF L
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL------------------- 151
Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAP 253
C GIS F GT EY+AP
Sbjct: 152 ----------------CKEGIS---------------------DGATMKXFCGTPEYLAP 174
Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRN 312
E++E + AVDWW LGVV++EM+ G PF + F IL +P ++
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKS 234
Query: 313 LIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWE-LLLKISRPPNIP 355
L+ LL+KDP +R+G +E+ H FF +NW+ ++ K PP P
Sbjct: 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKP 283
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 158/374 (42%), Gaps = 84/374 (22%)
Query: 8 RPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNG 67
+P + + + LG+G G V LVK+ + +A+K++ +++I K
Sbjct: 143 KPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK---------- 192
Query: 68 DKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD 127
D+ E RVL+N HP L L+ T + + ++Y G +L E++FS+
Sbjct: 193 DEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSE 250
Query: 128 DTIRFXXXXXXXXXXXXHN-MGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQAS 186
D RF H+ +VYRDLK EN+M+ ++GHI + DF L
Sbjct: 251 DRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL------------ 298
Query: 187 PKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVG 246
C GI F G
Sbjct: 299 -----------------------CKEGIK---------------------DGATMKTFCG 314
Query: 247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDL 303
T EY+APE++E + AVDWW LGVV++EM+ G PF ++ F IL R P
Sbjct: 315 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT 374
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNWELLL-KISRPPNIPAR 357
+G ++L+ LL+KDP +R+G +EI H FF G+ W+ + K PP P
Sbjct: 375 LGPEA--KSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKP-- 430
Query: 358 FEHENNESDGRGRD 371
+E+D R D
Sbjct: 431 --QVTSETDTRYFD 442
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 157/358 (43%), Gaps = 84/358 (23%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V LVK+ + +A+K++ +++I K D+ E RVL+N
Sbjct: 17 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK----------DEVAHTLTENRVLQNS 66
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP L L+ T + + ++Y G +L E++FS+D RF
Sbjct: 67 RHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDY 124
Query: 144 XHN-MGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H+ +VYRDLK EN+M+ ++GHI + DF L + GIK
Sbjct: 125 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC--------------------KEGIKDG 164
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
+ + FC GT EY+APE++E +
Sbjct: 165 AT-MKXFC-----------------------------------GTPEYLAPEVLEDNDYG 188
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTPLRNLIRRLLE 319
AVDWW LGVV++EM+ G PF ++ F IL R P +G ++L+ LL+
Sbjct: 189 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEA--KSLLSGLLK 246
Query: 320 KDPTKRIG-----VEEIKGHEFFKGVNWELLL-KISRPPNIPARFEHENNESDGRGRD 371
KDP +R+G +EI H FF G+ W+ + K PP P +E+D R D
Sbjct: 247 KDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKP----QVTSETDTRYFD 300
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 157/358 (43%), Gaps = 84/358 (23%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V LVK+ + +A+K++ +++I K D+ E RVL+N
Sbjct: 18 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK----------DEVAHTLTENRVLQNS 67
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP L L+ T + + ++Y G +L E++FS+D RF
Sbjct: 68 RHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDY 125
Query: 144 XHN-MGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H+ +VYRDLK EN+M+ ++GHI + DF L + GIK
Sbjct: 126 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC--------------------KEGIKDG 165
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
+ + FC GT EY+APE++E +
Sbjct: 166 AT-MKXFC-----------------------------------GTPEYLAPEVLEDNDYG 189
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTPLRNLIRRLLE 319
AVDWW LGVV++EM+ G PF ++ F IL R P +G ++L+ LL+
Sbjct: 190 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEA--KSLLSGLLK 247
Query: 320 KDPTKRIG-----VEEIKGHEFFKGVNWELLL-KISRPPNIPARFEHENNESDGRGRD 371
KDP +R+G +EI H FF G+ W+ + K PP P +E+D R D
Sbjct: 248 KDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKP----QVTSETDTRYFD 301
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 157/358 (43%), Gaps = 84/358 (23%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V LVK+ + +A+K++ +++I K D+ E RVL+N
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAK----------DEVAHTLTENRVLQNS 65
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP L L+ T + + ++Y G +L E++FS+D RF
Sbjct: 66 RHPFLTALKYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDY 123
Query: 144 XHN-MGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H+ +VYRDLK EN+M+ ++GHI + DF L + GIK
Sbjct: 124 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC--------------------KEGIKDG 163
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
+ + FC GT EY+APE++E +
Sbjct: 164 AT-MKXFC-----------------------------------GTPEYLAPEVLEDNDYG 187
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTPLRNLIRRLLE 319
AVDWW LGVV++EM+ G PF ++ F IL R P +G ++L+ LL+
Sbjct: 188 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEA--KSLLSGLLK 245
Query: 320 KDPTKRIG-----VEEIKGHEFFKGVNWELLL-KISRPPNIPARFEHENNESDGRGRD 371
KDP +R+G +EI H FF G+ W+ + K PP P +E+D R D
Sbjct: 246 KDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKP----QVTSETDTRYFD 299
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 162/373 (43%), Gaps = 92/373 (24%)
Query: 14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
DF LR++ GRG+ V LV+ ++ +A+KV+ KEL N+D + +
Sbjct: 21 DFDLLRVI---GRGSYAKVLLVRLKKTDRIYAMKVV--------KKELVNDDEDIDW--V 67
Query: 74 SFEQRVLRNVE-HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
E+ V HP L L T+ + + I+Y G DL + Q ++ ++ RF
Sbjct: 68 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARF 125
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
H GI+YRDLK +N+++ GHI L D+ +
Sbjct: 126 YSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM------------------ 167
Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVA 252
C G+ D F GT Y+A
Sbjct: 168 -----------------CKEGLRPGDTT---------------------SXFCGTPNYIA 189
Query: 253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR--GSS------RKETFYRILCRPPDLV 304
PEI+ G+ + F+VDWW+LGV++ EM+ G +PF GSS ++ ++++ +
Sbjct: 190 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 249
Query: 305 GEPTPLR--NLIRRLLEKDPTKRIGV------EEIKGHEFFKGVNWELL--LKISRP--P 352
++ ++++ L KDP +R+G +I+GH FF+ V+W+++ ++ P P
Sbjct: 250 PRSMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKP 309
Query: 353 NIPARFEHENNES 365
NI F +N +S
Sbjct: 310 NISGEFGLDNFDS 322
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 164/378 (43%), Gaps = 92/378 (24%)
Query: 9 PIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGD 68
P+ DF LR++ GRG+ V LV+ ++ +A+KV+ KEL N+D
Sbjct: 5 PLGLQDFDLLRVI---GRGSYAKVLLVRLKKTDRIYAMKVV--------KKELVNDDEDI 53
Query: 69 KYRRISFEQRVLRNVE-HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD 127
+ + E+ V HP L L T+ + + I+Y G DL + Q ++ +
Sbjct: 54 DW--VQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPE 109
Query: 128 DTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASP 187
+ RF H GI+YRDLK +N+++ GHI L D+ +
Sbjct: 110 EHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM------------- 156
Query: 188 KTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGT 247
C G+ D F GT
Sbjct: 157 ----------------------CKEGLRPGD---------------------TTSXFCGT 173
Query: 248 EEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR--GSS------RKETFYRILCR 299
Y+APEI+ G+ + F+VDWW+LGV++ EM+ G +PF GSS ++ ++++
Sbjct: 174 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 233
Query: 300 PPDLVGEPTPLR--NLIRRLLEKDPTKRIGVE------EIKGHEFFKGVNWELL--LKIS 349
+ ++ ++++ L KDP +R+G +I+GH FF+ V+W+++ ++
Sbjct: 234 KQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVV 293
Query: 350 RP--PNIPARFEHENNES 365
P PNI F +N +S
Sbjct: 294 PPFKPNISGEFGLDNFDS 311
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 162/373 (43%), Gaps = 92/373 (24%)
Query: 14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
DF LR++ GRG+ V LV+ ++ +A+KV+ KEL N+D + +
Sbjct: 6 DFDLLRVI---GRGSYAKVLLVRLKKTDRIYAMKVV--------KKELVNDDEDIDW--V 52
Query: 74 SFEQRVLRNVE-HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
E+ V HP L L T+ + + I+Y G DL + Q ++ ++ RF
Sbjct: 53 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARF 110
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
H GI+YRDLK +N+++ GHI L D+ +
Sbjct: 111 YSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM------------------ 152
Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVA 252
C G+ D F GT Y+A
Sbjct: 153 -----------------CKEGLRPGDTT---------------------SXFCGTPNYIA 174
Query: 253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR--GSS------RKETFYRILCRPPDLV 304
PEI+ G+ + F+VDWW+LGV++ EM+ G +PF GSS ++ ++++ +
Sbjct: 175 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 234
Query: 305 GEPTPLR--NLIRRLLEKDPTKRIGVE------EIKGHEFFKGVNWELL--LKISRP--P 352
++ ++++ L KDP +R+G +I+GH FF+ V+W+++ ++ P P
Sbjct: 235 PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKP 294
Query: 353 NIPARFEHENNES 365
NI F +N +S
Sbjct: 295 NISGEFGLDNFDS 307
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 161/373 (43%), Gaps = 92/373 (24%)
Query: 14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
DF LR++ GRG+ V LV+ ++ +A++V+ KEL N+D + +
Sbjct: 53 DFDLLRVI---GRGSYAKVLLVRLKKTDRIYAMRVV--------KKELVNDDEDIDW--V 99
Query: 74 SFEQRVLRNVE-HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
E+ V HP L L T+ + + I+Y G DL + Q ++ ++ RF
Sbjct: 100 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPEEHARF 157
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
H GI+YRDLK +N+++ GHI L D+ +
Sbjct: 158 YSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM------------------ 199
Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVA 252
C G+ D F GT Y+A
Sbjct: 200 -----------------CKEGLRPGDTT---------------------STFCGTPNYIA 221
Query: 253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR--GSS------RKETFYRILCRPPDLV 304
PEI+ G+ + F+VDWW+LGV++ EM+ G +PF GSS ++ ++++ +
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 281
Query: 305 GEPTPLR--NLIRRLLEKDPTKRIGVE------EIKGHEFFKGVNWELL--LKISRP--P 352
++ ++++ L KDP +R+G +I+GH FF+ V+W+++ ++ P P
Sbjct: 282 PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKP 341
Query: 353 NIPARFEHENNES 365
NI F +N +S
Sbjct: 342 NISGEFGLDNFDS 354
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 151/328 (46%), Gaps = 77/328 (23%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G+ G VFL + ++++ FA+K + +D++ L ++D E+RVL
Sbjct: 26 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVV------LMDDD----VECTMVEKRVLSLA 75
Query: 84 -EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
EHP L + T + + + ++Y G DL + QS F F
Sbjct: 76 WEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIILGLQ 133
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H+ GIVYRDLK +NI++ ++GHI + DF + K + + ++
Sbjct: 134 FLHSKGIVYRDLKLDNILLDKDGHIKIADFGMC------------KENMLGDAKT----- 176
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
++FC GT +Y+APEI+ G+ ++
Sbjct: 177 ----NEFC-----------------------------------GTPDYIAPEILLGQKYN 197
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL----RNLIRRLL 318
+VDWWS GV+L+EML G +PF G +E F+ I P P L ++L+ +L
Sbjct: 198 HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNP---FYPRWLEKEAKDLLVKLF 254
Query: 319 EKDPTKRIGVE-EIKGHEFFKGVNWELL 345
++P KR+GV +I+ H F+ +NWE L
Sbjct: 255 VREPEKRLGVRGDIRQHPLFREINWEEL 282
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 148/336 (44%), Gaps = 75/336 (22%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G+ V L +++ +S +A+K++ + I K+ +K ++ E+ V+ +
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 90
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+HP +L D+ + + + Y G L +RK S F + RF
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 147
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H GI++RDLKPENI++ E+ HI + DF + LSP++ QA AN+ G
Sbjct: 148 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------ANSFVG---- 197
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
T +YV+PE++ K
Sbjct: 198 --------------------------------------------TAQYVSPELLTEKSAC 213
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
+ D W+LG ++++++ G PFR + F +I+ D + P R+L+ +LL D
Sbjct: 214 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 273
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRP 351
TKR+G EE++G H FF+ V WE L + + P
Sbjct: 274 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 309
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 148/339 (43%), Gaps = 76/339 (22%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G+ V L +++ +S +A+K++ + I K+ +K ++ E+ V+ +
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 71
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+HP +L D+ + + + Y G L +RK S F + RF
Sbjct: 72 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 128
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H GI++RDLKPENI++ E+ HI + DF + LSP++ QA AN G
Sbjct: 129 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------ANXFVG---- 178
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
T +YV+PE++ K
Sbjct: 179 --------------------------------------------TAQYVSPELLTEKSAC 194
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
+ D W+LG ++++++ G PFR + F +I+ D + P R+L+ +LL D
Sbjct: 195 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 254
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRPPNI 354
TKR+G EE++G H FF+ V WE L + PP +
Sbjct: 255 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQ-QTPPKL 292
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 151/341 (44%), Gaps = 76/341 (22%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G+ V L +++ +S +A+K++ + I K+ +K ++ E+ V+ +
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 87
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+HP +L D+ + + + Y G L +RK S F + RF
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 144
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H GI++RDLKPENI++ E+ HI + DF + L SP++ K+
Sbjct: 145 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-------SPES----------KQA 187
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
R+ FVGT +YV+PE++ K
Sbjct: 188 RA-------------------------------------NAFVGTAQYVSPELLTEKSAC 210
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
+ D W+LG ++++++ G PFR + F +I+ D + P R+L+ +LL D
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 270
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRPPNIPA 356
TKR+G EE++G H FF+ V WE L + PP + A
Sbjct: 271 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQ-QTPPKLTA 310
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 151/341 (44%), Gaps = 76/341 (22%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G+ V L +++ +S +A+K++ + I K+ +K ++ E+ V+ +
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 86
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+HP +L D+ + + + Y G L +RK S F + RF
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 143
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H GI++RDLKPENI++ E+ HI + DF + L SP++ K+
Sbjct: 144 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-------SPES----------KQA 186
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
R+ FVGT +YV+PE++ K
Sbjct: 187 RA-------------------------------------NSFVGTAQYVSPELLTEKSAC 209
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
+ D W+LG ++++++ G PFR + F +I+ D + P R+L+ +LL D
Sbjct: 210 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 269
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRPPNIPA 356
TKR+G EE++G H FF+ V WE L + PP + A
Sbjct: 270 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQ-QTPPKLTA 309
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 152/341 (44%), Gaps = 76/341 (22%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G+ V L +++ +S +A+K++ + I K+ +K ++ E+ V+ +
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 87
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+HP +L D+ + + + Y G L +RK S F + RF
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 144
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H GI++RDLKPENI++ E+ HI + DF + L SP++ K+
Sbjct: 145 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-------SPES----------KQA 187
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
R+ FVGT +YV+PE++ K
Sbjct: 188 RA-------------------------------------NXFVGTAQYVSPELLTEKSAC 210
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
+ D W+LG ++++++ G PFR + F +I+ D + P R+L+ +LL D
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 270
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRPPNIPA 356
TKR+G EE++G H FF+ V WE L + PP + A
Sbjct: 271 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQ-QTPPKLTA 310
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 152/341 (44%), Gaps = 76/341 (22%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G+ V L +++ +S +A+K++ + I K+ +K ++ E+ V+ +
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 86
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+HP +L D+ + + + Y G L +RK S F + RF
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 143
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H GI++RDLKPENI++ E+ HI + DF + L SP++ K+
Sbjct: 144 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-------SPES----------KQA 186
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
R+ FVGT +YV+PE++ K
Sbjct: 187 RA-------------------------------------NXFVGTAQYVSPELLTEKSAC 209
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
+ D W+LG ++++++ G PFR + F +I+ D + P R+L+ +LL D
Sbjct: 210 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 269
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRPPNIPA 356
TKR+G EE++G H FF+ V WE L + PP + A
Sbjct: 270 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQ-QTPPKLTA 309
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 148/339 (43%), Gaps = 76/339 (22%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G+ V L +++ +S +A+K++ + I K+ +K ++ E+ V+ +
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 65
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+HP +L D+ + + + Y G L +RK S F + RF
Sbjct: 66 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 122
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H GI++RDLKPENI++ E+ HI + DF + LSP++ QA AN G
Sbjct: 123 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------ANXFVG---- 172
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
T +YV+PE++ K
Sbjct: 173 --------------------------------------------TAQYVSPELLTEKSAC 188
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
+ D W+LG ++++++ G PFR + F +I+ D + P R+L+ +LL D
Sbjct: 189 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 248
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRPPNI 354
TKR+G EE++G H FF+ V WE L + PP +
Sbjct: 249 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQ-QTPPKL 286
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 148/339 (43%), Gaps = 76/339 (22%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G+ V L +++ +S +A+K++ + I K+ +K ++ E+ V+ +
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 64
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+HP +L D+ + + + Y G L +RK S F + RF
Sbjct: 65 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 121
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H GI++RDLKPENI++ E+ HI + DF + LSP++ QA AN G
Sbjct: 122 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------ANXFVG---- 171
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
T +YV+PE++ K
Sbjct: 172 --------------------------------------------TAQYVSPELLTEKSAC 187
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
+ D W+LG ++++++ G PFR + F +I+ D + P R+L+ +LL D
Sbjct: 188 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 247
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRPPNI 354
TKR+G EE++G H FF+ V WE L + PP +
Sbjct: 248 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQ-QTPPKL 285
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 147/336 (43%), Gaps = 75/336 (22%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G+ V L +++ +S +A+K++ + I K+ +K ++ E+ V+ +
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 66
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+HP +L D+ + + + Y G L +RK S F + RF
Sbjct: 67 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 123
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H GI++RDLKPENI++ E+ HI + DF + LSP++ QA AN G
Sbjct: 124 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------ANXFVG---- 173
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
T +YV+PE++ K
Sbjct: 174 --------------------------------------------TAQYVSPELLTEKSAC 189
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
+ D W+LG ++++++ G PFR + F +I+ D + P R+L+ +LL D
Sbjct: 190 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 249
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRP 351
TKR+G EE++G H FF+ V WE L + + P
Sbjct: 250 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 285
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 147/336 (43%), Gaps = 75/336 (22%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G+ V L +++ +S +A+K++ + I K+ +K ++ E+ V+ +
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 67
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+HP +L D+ + + + Y G L +RK S F + RF
Sbjct: 68 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 124
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H GI++RDLKPENI++ E+ HI + DF + LSP++ QA AN G
Sbjct: 125 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------ANXFVG---- 174
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
T +YV+PE++ K
Sbjct: 175 --------------------------------------------TAQYVSPELLTEKSAC 190
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
+ D W+LG ++++++ G PFR + F +I+ D + P R+L+ +LL D
Sbjct: 191 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 250
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRP 351
TKR+G EE++G H FF+ V WE L + + P
Sbjct: 251 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 286
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 150/336 (44%), Gaps = 75/336 (22%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G+ V L +++ +S +A+K++ + I K+ +K ++ E+ V+ +
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 89
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+HP +L D+ + + + Y G L +RK S F + RF
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 146
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H GI++RDLKPENI++ E+ HI + DF + L SP++ K+
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-------SPES----------KQA 189
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
R+ FVGT +YV+PE++ K
Sbjct: 190 RA-------------------------------------NXFVGTAQYVSPELLTEKSAX 212
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
+ D W+LG ++++++ G PFR + F +I+ D + P R+L+ +LL D
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRP 351
TKR+G EE++G H FF+ V WE L + + P
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 308
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 149/336 (44%), Gaps = 75/336 (22%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G+ V L +++ +S +A+K++ + I K+ +K ++ E+ V+ +
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 89
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+HP +L D+ + + + Y G L +RK S F + RF
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGS---FDETCTRFYTAEIVSALE 146
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H GI++RDLKPENI++ E+ HI + DF + L SP++ K+
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-------SPES----------KQA 189
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
R+ FVGT +YV+PE++ K
Sbjct: 190 RA-------------------------------------NSFVGTAQYVSPELLTEKSAS 212
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
+ D W+LG ++++++ G PFR + F +I+ D + P R+L+ +LL D
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRP 351
TKR+G EE++G H FF+ V WE L + + P
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 308
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 150/336 (44%), Gaps = 75/336 (22%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G+ V L +++ +S +A+K++ + I K+ +K ++ E+ V+ +
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 94
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+HP +L D+ + + + Y G L +RK S F + RF
Sbjct: 95 DHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 151
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H GI++RDLKPENI++ E+ HI + DF + L SP++ K+
Sbjct: 152 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-------SPES----------KQA 194
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
R+ FVGT +YV+PE++ K
Sbjct: 195 RA-------------------------------------NXFVGTAQYVSPELLTEKSAC 217
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
+ D W+LG ++++++ G PFR + F +I+ D + P R+L+ +LL D
Sbjct: 218 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 277
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRP 351
TKR+G EE++G H FF+ V WE L + + P
Sbjct: 278 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 313
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 149/336 (44%), Gaps = 75/336 (22%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G+ L +++ +S +A+K++ + I K+ +K ++ E+ V+ +
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 87
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+HP +L D+ + + + Y G L +RK S F + RF
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 144
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H GI++RDLKPENI++ E+ HI + DF + L SP++ K+
Sbjct: 145 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL-------SPES----------KQA 187
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
R+ FVGT +YV+PE++ K
Sbjct: 188 RA-------------------------------------NXFVGTAQYVSPELLTEKSAC 210
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
+ D W+LG ++++++ G PFR + F +I+ D + P R+L+ +LL D
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 270
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRP 351
TKR+G EE++G H FF+ V WE L + + P
Sbjct: 271 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 306
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 149/366 (40%), Gaps = 90/366 (24%)
Query: 18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
+ LG+G+ G V L + E+ + +A+KV+ +D+I + D E+
Sbjct: 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQD----------DDVECTMTEK 74
Query: 78 RVL---RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXX 134
R+L RN HP L +L T + + +++ G DL + Q + F + RF
Sbjct: 75 RILSLARN--HPFLTQLFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDEARARFYA 130
Query: 135 XXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAAN 194
H+ GI+YRDLK +N+++ GH L DF +
Sbjct: 131 AEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGM-------------------- 170
Query: 195 TRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPE 254
C GI F GT +Y+APE
Sbjct: 171 ---------------CKEGIC---------------------NGVTTATFCGTPDYIAPE 194
Query: 255 IIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLR--- 311
I++ + AVDWW++GV+L+EML G PF + + F IL D V PT L
Sbjct: 195 ILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL---NDEVVYPTWLHEDA 251
Query: 312 -NLIRRLLEKDPTKRIGV------EEIKGHEFFKGVNWELL--LKISRP--PNIPARFEH 360
+++ + K+PT R+G I H FFK ++W L +I P P I +R +
Sbjct: 252 TGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQIEPPFRPRIKSREDV 311
Query: 361 ENNESD 366
N + D
Sbjct: 312 SNFDPD 317
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 143/336 (42%), Gaps = 75/336 (22%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G+ V L +++ +S +A+K++ + I K+ +K ++ E+ V+ +
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 92
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+HP +L D+ + + + Y G L +RK S F + RF
Sbjct: 93 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 149
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H GI++RDLKPENI++ E+ HI + DF + LSP++ QA AN G +
Sbjct: 150 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------ANXFVGTAQY 203
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
S PE++ K
Sbjct: 204 VS------------------------------------------------PELLTEKSAC 215
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
+ D W+LG ++++++ G PFR + F +I+ D P R+L+ +LL D
Sbjct: 216 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPKARDLVEKLLVLD 275
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRP 351
TKR+G EE++G H FF+ V WE L + + P
Sbjct: 276 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 311
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 75/336 (22%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G+ V L +++ +S +A+K++ + I K+ +K ++ E+ V+ +
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 89
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+HP +L D+ + + + Y G L +RK S F + RF
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 146
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H GI++RDLKPENI++ E+ HI + DF + LSP++ QA AN G +
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------ANXFVGTAQY 200
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
S PE++ K
Sbjct: 201 VS------------------------------------------------PELLTEKSAC 212
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
+ D W+LG ++++++ G PFR + F +I+ D + P R+L+ +LL D
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRP 351
TKR+G EE++G H FF+ V WE L + + P
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 308
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 75/336 (22%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G+ V L +++ +S +A+K++ + I K+ +K ++ E+ V+ +
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 90
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+HP +L D+ + + + Y G L +RK S F + RF
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 147
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H GI++RDLKPENI++ E+ HI + DF + LSP++ QA AN G +
Sbjct: 148 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------ANXFVGTAQY 201
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
S PE++ K
Sbjct: 202 VS------------------------------------------------PELLTEKSAC 213
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
+ D W+LG ++++++ G PFR + F +I+ D + P R+L+ +LL D
Sbjct: 214 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 273
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRP 351
TKR+G EE++G H FF+ V WE L + + P
Sbjct: 274 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 309
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 75/336 (22%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G+ V L +++ +S +A+K++ + I K+ +K ++ E+ V+ +
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 89
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+HP +L D+ + + + Y G L +RK S F + RF
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 146
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H GI++RDLKPENI++ E+ HI + DF + LSP++ QA AN G +
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------ANXFVGTAQY 200
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
S PE++ K
Sbjct: 201 VS------------------------------------------------PELLTEKSAC 212
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
+ D W+LG ++++++ G PFR + F +I+ D + P R+L+ +LL D
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRP 351
TKR+G EE++G H FF+ V WE L + + P
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 308
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 75/336 (22%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G+ V L +++ +S +A+K++ + I K+ +K ++ E+ V+ +
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 89
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+HP +L D+ + + + Y G L +RK S F + RF
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 146
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H GI++RDLKPENI++ E+ HI + DF + LSP++ QA AN G +
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------ANXFVGTAQY 200
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
S PE++ K
Sbjct: 201 VS------------------------------------------------PELLTEKSAC 212
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
+ D W+LG ++++++ G PFR + F +I+ D + P R+L+ +LL D
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRP 351
TKR+G EE++G H FF+ V WE L + + P
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 308
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 75/336 (22%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G+ V L +++ +S +A+K++ + I K+ +K ++ E+ V+ +
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 87
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+HP +L D+ + + + Y G L +RK S F + RF
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 144
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H GI++RDLKPENI++ E+ HI + DF + LSP++ QA AN G +
Sbjct: 145 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------ANXFVGTAQY 198
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
S PE++ K
Sbjct: 199 VS------------------------------------------------PELLTEKSAC 210
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
+ D W+LG ++++++ G PFR + F +I+ D + P R+L+ +LL D
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 270
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRP 351
TKR+G EE++G H FF+ V WE L + + P
Sbjct: 271 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 306
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 144/336 (42%), Gaps = 75/336 (22%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G+ V L +++ +S +A+K++ + I K+ +K ++ E+ V+ +
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKE----------NKVPYVTRERDVMSRL 89
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+HP +L D+ + + + Y G L +RK S F + RF
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSALE 146
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H GI++RDLKPENI++ E+ HI + DF + LSP++ QA AN G +
Sbjct: 147 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------ANXFVGTAQY 200
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
S PE++ K
Sbjct: 201 VS------------------------------------------------PELLTEKSAC 212
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRRLLEKD 321
+ D W+LG ++++++ G PFR + F +I+ D + P R+L+ +LL D
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 322 PTKRIGVEEIKG------HEFFKGVNWELLLKISRP 351
TKR+G EE++G H FF+ V WE L + + P
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPP 308
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 144/346 (41%), Gaps = 84/346 (24%)
Query: 10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDK 69
++ DF+ L + LG+G+ G V L + E +A+K++ +D++ + D
Sbjct: 16 VKLTDFNFLMV---LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQD----------DD 62
Query: 70 YRRISFEQRVLRNVEHP-LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDD 128
E+RVL ++ P L +L T + + ++Y G DL +Q + F +
Sbjct: 63 VECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK--FKEP 120
Query: 129 TIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPK 188
F H GI+YRDLK +N+M+ GHI + DF + +
Sbjct: 121 QAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKE----------- 169
Query: 189 TVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTE 248
+ G+ R +FC GT
Sbjct: 170 -----HMMDGVTTR-----EFC-----------------------------------GTP 184
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL----CRPPDLV 304
+Y+APEII + + +VDWW+ GV+L+EML G PF G E F I+ P L
Sbjct: 185 DYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLS 244
Query: 305 GEPTPLRNLIRRLLEKDPTKRIGV-----EEIKGHEFFKGVNWELL 345
E ++ + L+ K P KR+G +++ H FF+ ++WE L
Sbjct: 245 KEAV---SICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKL 287
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 153/345 (44%), Gaps = 81/345 (23%)
Query: 13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
++F I+ A+G+G+ G V +V+ ++ + +A+K + K K + N+ R
Sbjct: 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYM------NKQKCVERNE----VRN 61
Query: 73 ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
+ E ++++ +EHP L L ++ + +D G DL +Q F ++T++
Sbjct: 62 VFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH--FKEETVKL 119
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
N I++RD+KP+NI++ E+GH+ + DF+++ L P+ + T +A
Sbjct: 120 FICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAML----PRETQITTMA 175
Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVA 252
GT+ Y+A
Sbjct: 176 -----------------------------------------------------GTKPYMA 182
Query: 253 PEII---EGKGHDFAVDWWSLGVVLHEMLYGATPFR---GSSRKE---TFYRILCRPPDL 303
PE+ +G G+ FAVDWWSLGV +E+L G P+ +S KE TF + P
Sbjct: 183 PEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSA 242
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIG-VEEIKGHEFFKGVNWELLLK 347
+ + +L+++LLE +P +R + +++ + +NW+ + +
Sbjct: 243 WSQ--EMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINWDAVFQ 285
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 148/349 (42%), Gaps = 82/349 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR- 78
+V +GRGA G V LV+ + + +A+K++ + + K+S +E+R
Sbjct: 73 VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDS-----------AFFWEERD 121
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
++ P + +L D+++ ++Y PG DL +L S + RF
Sbjct: 122 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL---MSNYDVPEKWARFYTAEVV 178
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
H+MG ++RD+KP+N+++ ++GH+ L DF K++ + G
Sbjct: 179 LALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN----------------KEG 222
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
+ + C + + GT +Y++PE+++
Sbjct: 223 MVR--------CDTAV-------------------------------GTPDYISPEVLKS 243
Query: 259 KGHDFA----VDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLVGEPTP 309
+G D DWWS+GV L+EML G TPF S T+ +I+ PD
Sbjct: 244 QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKE 303
Query: 310 LRNLIRRLLEKDPTK--RIGVEEIKGHEFFKGVNWEL-LLKISRPPNIP 355
+NLI L + R GVEEIK H FFK W L+ + P +P
Sbjct: 304 AKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVP 352
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 148/348 (42%), Gaps = 80/348 (22%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
+V +GRGA G V LV+ + + +A+K++ K + + +D+ + E+ +
Sbjct: 78 VVKVIGRGAFGEVQLVRHKSTRKVYAMKLL------SKFEMIKRSDSAFFWE----ERDI 127
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
+ P + +L D+++ ++Y PG DL +L S + RF
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL---MSNYDVPEKWARFYTAEVVL 184
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H+MG ++RD+KP+N+++ ++GH+ L DF K++ + G+
Sbjct: 185 ALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN----------------KEGM 228
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
+ C + + GT +Y++PE+++ +
Sbjct: 229 VR--------CDTAV-------------------------------GTPDYISPEVLKSQ 249
Query: 260 GHDFA----VDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLVGEPTPL 310
G D DWWS+GV L+EML G TPF S T+ +I+ PD
Sbjct: 250 GGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEA 309
Query: 311 RNLIRRLLEKDPTK--RIGVEEIKGHEFFKGVNWEL-LLKISRPPNIP 355
+NLI L + R GVEEIK H FFK W L+ + P +P
Sbjct: 310 KNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVP 357
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 148/349 (42%), Gaps = 82/349 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR- 78
+V +GRGA G V LV+ + + +A+K++ + + K+S +E+R
Sbjct: 78 VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDS-----------AFFWEERD 126
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
++ P + +L D+++ ++Y PG DL +L S + RF
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNL---MSNYDVPEKWARFYTAEVV 183
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
H+MG ++RD+KP+N+++ ++GH+ L DF K++ + G
Sbjct: 184 LALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN----------------KEG 227
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
+ + C + + GT +Y++PE+++
Sbjct: 228 MVR--------CDTAV-------------------------------GTPDYISPEVLKS 248
Query: 259 KGHDFA----VDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLVGEPTP 309
+G D DWWS+GV L+EML G TPF S T+ +I+ PD
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKE 308
Query: 310 LRNLIRRLLEKDPTK--RIGVEEIKGHEFFKGVNWEL-LLKISRPPNIP 355
+NLI L + R GVEEIK H FFK W L+ + P +P
Sbjct: 309 AKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVP 357
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 146/357 (40%), Gaps = 85/357 (23%)
Query: 10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDK 69
++ DF+ L + LG+G+ G V L + + E +A+K++ +D++ + D
Sbjct: 17 MKLTDFNFLMV---LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQD----------DD 63
Query: 70 YRRISFEQRVLR-NVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDD 128
E+RVL + P L +L T + + ++Y G DL + Q F +
Sbjct: 64 VECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEP 121
Query: 129 TIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPK 188
F + GI+YRDLK +N+M+ GHI + DF + +
Sbjct: 122 HAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE----------- 170
Query: 189 TVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTE 248
N G+ + FC GT
Sbjct: 171 -----NIWDGVTTK-----XFC-----------------------------------GTP 185
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL----CRPPDLV 304
+Y+APEII + + +VDWW+ GV+L+EML G PF G E F I+ P +
Sbjct: 186 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMS 245
Query: 305 GEPTPLRNLIRRLLEKDPTKRIGV-----EEIKGHEFFKGVNWELL-LKISRPPNIP 355
E + + L+ K P KR+G +IK H FF+ ++WE L K +PP P
Sbjct: 246 KEAVA---ICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKP 299
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 146/357 (40%), Gaps = 85/357 (23%)
Query: 10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDK 69
++ DF+ L + LG+G+ G V L + + E +A+K++ +D++ + D
Sbjct: 338 MKLTDFNFLMV---LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQD----------DD 384
Query: 70 YRRISFEQRVLR-NVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDD 128
E+RVL + P L +L T + + ++Y G DL + Q F +
Sbjct: 385 VECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEP 442
Query: 129 TIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPK 188
F + GI+YRDLK +N+M+ GHI + DF + +
Sbjct: 443 HAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE----------- 491
Query: 189 TVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTE 248
N G+ + FC GT
Sbjct: 492 -----NIWDGVTTK-----XFC-----------------------------------GTP 506
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL----CRPPDLV 304
+Y+APEII + + +VDWW+ GV+L+EML G PF G E F I+ P +
Sbjct: 507 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMS 566
Query: 305 GEPTPLRNLIRRLLEKDPTKRIGV-----EEIKGHEFFKGVNWELL-LKISRPPNIP 355
E + + L+ K P KR+G +IK H FF+ ++WE L K +PP P
Sbjct: 567 KEAV---AICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKP 620
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 139/335 (41%), Gaps = 81/335 (24%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
+V +GRGA G V LV+ S + +A+K++ K + + +D+ + E+ +
Sbjct: 79 VVKVIGRGAFGEVQLVRHKASQKVYAMKLL------SKFEMIKRSDSAFFWE----ERDI 128
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
+ P + +L DK++ ++Y PG DL +L S + +F
Sbjct: 129 MAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNL---MSNYDVPEKWAKFYTAEVVL 185
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H+MG+++RD+KP+N+++ ++GH+ L DF K+ +G+
Sbjct: 186 ALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD----------------ETGM 229
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
C + + D Y++PE+++ +
Sbjct: 230 VH--------CDTAVGTPD-------------------------------YISPEVLKSQ 250
Query: 260 GHDFA----VDWWSLGVVLHEMLYGATPFRGSSRKETFYRI------LCRPPDLVGEPTP 309
G D DWWS+GV L EML G TPF S T+ +I LC P D
Sbjct: 251 GGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPED-AEISKH 309
Query: 310 LRNLIRRLLEKDPTK--RIGVEEIKGHEFFKGVNW 342
+NLI L + R GVEEIK H FFK W
Sbjct: 310 AKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQW 344
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 78/122 (63%), Gaps = 13/122 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-CR--- 299
F GT EY+APEI+ GH+ AVDWWSLG ++++ML GA PF G +RK+T +IL C+
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL 240
Query: 300 PPDLVGEPTPLRNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNW-ELLLKISRPPN 353
PP L E R+L+++LL+++ R+G E++ H FF+ +NW ELL + PP
Sbjct: 241 PPYLTQEA---RDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPF 297
Query: 354 IP 355
P
Sbjct: 298 KP 299
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 14/162 (8%)
Query: 17 CLRIVSALGRGAKGVVFLVKDVESSES---FALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
C ++ LG+G G VF V+ V + + FA+KV+ + +I + +K+ +
Sbjct: 18 CFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKA------- 70
Query: 74 SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFX 133
E+ +L V+HP + L T + ++Y G +L + + E +F +DT F
Sbjct: 71 --ERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFY 126
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H GI+YRDLKPENIM+ GH+ L DF L
Sbjct: 127 LAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLC 168
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 78/122 (63%), Gaps = 13/122 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-CR--- 299
F GT EY+APEI+ GH+ AVDWWSLG ++++ML GA PF G +RK+T +IL C+
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL 240
Query: 300 PPDLVGEPTPLRNLIRRLLEKDPTKRIG-----VEEIKGHEFFKGVNW-ELLLKISRPPN 353
PP L E R+L+++LL+++ R+G E++ H FF+ +NW ELL + PP
Sbjct: 241 PPYLTQEA---RDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPF 297
Query: 354 IP 355
P
Sbjct: 298 KP 299
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 14/162 (8%)
Query: 17 CLRIVSALGRGAKGVVFLVKDVESSES---FALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
C ++ LG+G G VF V+ V + + FA+KV+ + +I + +K+ +
Sbjct: 18 CFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKA------- 70
Query: 74 SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFX 133
E+ +L V+HP + L T + ++Y G +L + + E +F +DT F
Sbjct: 71 --ERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFY 126
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H GI+YRDLKPENIM+ GH+ L DF L
Sbjct: 127 LAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLC 168
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 135/319 (42%), Gaps = 75/319 (23%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 66
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 124
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H+ +++RD+KPEN+++ G + + DF S +P + RR
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSCH--------APSS------------RR 164
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
+ LS GT +Y+ PE+IEG+ HD
Sbjct: 165 TTLS--------------------------------------GTLDYLPPEMIEGRMHDE 186
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTPLRNLIRRLLEK 320
VD WSLGV+ +E L G PF ++ +ET+ RI PD V E R+LI RLL+
Sbjct: 187 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--RDLISRLLKH 244
Query: 321 DPTKRIGVEEIKGHEFFKG 339
+P++R + E+ H +
Sbjct: 245 NPSQRPMLREVLEHPWITA 263
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 131/328 (39%), Gaps = 83/328 (25%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWR--DLIEKKSKELTNNDNGDKYRRISFEQ 77
+V +G G GV L++D +S+E A+K I R + E +E+ N+
Sbjct: 23 LVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINH------------- 69
Query: 78 RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXX 137
R++ HP + R + V+ T + ++Y G +L + + FS+D RF
Sbjct: 70 ---RSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARFFFQQL 124
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
H M + +RDLK EN ++ SP L
Sbjct: 125 ISGVSYCHAMQVCHRDLKLENTLLD----------------------GSPAPRL------ 156
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
K C+ G S +H VGT Y+APE++
Sbjct: 157 ----------KICAFGYSKSSVLHSQPKST-----------------VGTPAYIAPEVLL 189
Query: 258 GKGHDFAV-DWWSLGVVLHEMLYGATPFRGSSR----KETFYRIL---CRPPDLVGEPTP 309
K +D V D WS GV L+ ML GA PF ++T +RIL PD V
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPE 249
Query: 310 LRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
R+LI R+ DP KRI + EI+ HE+F
Sbjct: 250 CRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 131/328 (39%), Gaps = 83/328 (25%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWR--DLIEKKSKELTNNDNGDKYRRISFEQ 77
+V +G G GV L++D +S+E A+K I R + E +E+ N+
Sbjct: 23 LVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINH------------- 69
Query: 78 RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXX 137
R++ HP + R + V+ T + ++Y G +L + + FS+D RF
Sbjct: 70 ---RSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARFFFQQL 124
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
H M + +RDLK EN ++ SP L
Sbjct: 125 ISGVSYCHAMQVCHRDLKLENTLLD----------------------GSPAPRL------ 156
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
K C+ G S +H VGT Y+APE++
Sbjct: 157 ----------KICAFGYSKSSVLHSQPKDT-----------------VGTPAYIAPEVLL 189
Query: 258 GKGHDFAV-DWWSLGVVLHEMLYGATPFRGSSR----KETFYRIL---CRPPDLVGEPTP 309
K +D V D WS GV L+ ML GA PF ++T +RIL PD V
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPE 249
Query: 310 LRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
R+LI R+ DP KRI + EI+ HE+F
Sbjct: 250 CRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 72/123 (58%), Gaps = 13/123 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
F GT EY+APE++ +GH + DWWS GV++ EML G+ PF+G RKET IL
Sbjct: 190 FCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAK--- 246
Query: 304 VGEP----TPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNWELLLKIS-RPPN 353
+G P T ++L+R L +++P R+ G EEIK H F+ ++W L + +PP
Sbjct: 247 LGMPQFLSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHVFYSTIDWNKLYRREIKPPF 306
Query: 354 IPA 356
PA
Sbjct: 307 KPA 309
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 87/165 (52%), Gaps = 16/165 (9%)
Query: 14 DFSCLRIVSALGRGAKGVVFLVKDV---ESSESFALKVIWRDLIEKKSKELTNNDNGDKY 70
D S ++ LG+G+ G VFLV+ V +S +A+KV+ + ++ + +
Sbjct: 26 DPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDR----------- 74
Query: 71 RRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R E+ +L +V HP + +L T+ + +D+ G DL + + E MF+++ +
Sbjct: 75 VRTKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFT--RLSKEVMFTEEDV 132
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+F H++GI+YRDLKPENI++ E GHI L DF LS
Sbjct: 133 KFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 177
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 130/328 (39%), Gaps = 83/328 (25%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWR--DLIEKKSKELTNNDNGDKYRRISFEQ 77
+V +G G GV L++D +S+E A+K I R + E +E+ N+
Sbjct: 22 LVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINH------------- 68
Query: 78 RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXX 137
R++ HP + R + V+ T + ++Y G +L + + FS+D RF
Sbjct: 69 ---RSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARFFFQQL 123
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
H M + +RDLK EN ++ SP L
Sbjct: 124 ISGVSYCHAMQVCHRDLKLENTLLD----------------------GSPAPRL------ 155
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
K C G S +H VGT Y+APE++
Sbjct: 156 ----------KICDFGYSKSSVLHSQPKST-----------------VGTPAYIAPEVLL 188
Query: 258 GKGHDFAV-DWWSLGVVLHEMLYGATPFRGSSR----KETFYRIL---CRPPDLVGEPTP 309
K +D V D WS GV L+ ML GA PF ++T +RIL PD V
Sbjct: 189 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPE 248
Query: 310 LRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
R+LI R+ DP KRI + EI+ HE+F
Sbjct: 249 CRHLISRIFVADPAKRISIPEIRNHEWF 276
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 70/122 (57%), Gaps = 13/122 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
F GT EY+APE++ +GH + DWWS GV++ EML G PF+G RKET IL
Sbjct: 187 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK--- 243
Query: 304 VGEPTPL----RNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNWELLLKIS-RPPN 353
+G P L ++L+R L +++P R+ GVEEIK H FF ++W L + PP
Sbjct: 244 LGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPF 303
Query: 354 IP 355
P
Sbjct: 304 KP 305
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 87/165 (52%), Gaps = 16/165 (9%)
Query: 14 DFSCLRIVSALGRGAKGVVFLVKDVESSES---FALKVIWRDLIEKKSKELTNNDNGDKY 70
D S ++ LG+G+ G VFLVK + S++ +A+KV+ + ++ + +
Sbjct: 23 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDR----------- 71
Query: 71 RRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R E+ +L V HP + +L T+ + +D+ G DL + + E MF+++ +
Sbjct: 72 VRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFT--RLSKEVMFTEEDV 129
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+F H++GI+YRDLKPENI++ E GHI L DF LS
Sbjct: 130 KFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 174
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 70/122 (57%), Gaps = 13/122 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
F GT EY+APE++ +GH + DWWS GV++ EML G PF+G RKET IL
Sbjct: 186 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK--- 242
Query: 304 VGEPTPL----RNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNWELLLKIS-RPPN 353
+G P L ++L+R L +++P R+ GVEEIK H FF ++W L + PP
Sbjct: 243 LGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPF 302
Query: 354 IP 355
P
Sbjct: 303 KP 304
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 87/165 (52%), Gaps = 16/165 (9%)
Query: 14 DFSCLRIVSALGRGAKGVVFLVKDVESSES---FALKVIWRDLIEKKSKELTNNDNGDKY 70
D S ++ LG+G+ G VFLVK + S++ +A+KV+ + ++ + +
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDR----------- 70
Query: 71 RRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R E+ +L V HP + +L T+ + +D+ G DL + + E MF+++ +
Sbjct: 71 VRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFT--RLSKEVMFTEEDV 128
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+F H++GI+YRDLKPENI++ E GHI L DF LS
Sbjct: 129 KFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 129/328 (39%), Gaps = 83/328 (25%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWR--DLIEKKSKELTNNDNGDKYRRISFEQ 77
+V +G G GV L++D +S+E A+K I R + +E+ N+
Sbjct: 23 LVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINH------------- 69
Query: 78 RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXX 137
R++ HP + R + V+ T + ++Y G +L + + FS+D RF
Sbjct: 70 ---RSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARFFFQQL 124
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
H M + +RDLK EN ++ SP L
Sbjct: 125 ISGVSYCHAMQVCHRDLKLENTLLD----------------------GSPAPRL------ 156
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
K C G S +H VGT Y+APE++
Sbjct: 157 ----------KICDFGYSKSSVLHSQPKST-----------------VGTPAYIAPEVLL 189
Query: 258 GKGHDFAV-DWWSLGVVLHEMLYGATPFRGSSR----KETFYRIL---CRPPDLVGEPTP 309
K +D V D WS GV L+ ML GA PF ++T +RIL PD V
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPE 249
Query: 310 LRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
R+LI R+ DP KRI + EI+ HE+F
Sbjct: 250 CRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 132/328 (40%), Gaps = 83/328 (25%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWR--DLIEKKSKELTNNDNGDKYRRISFEQ 77
+V +G G GV L++D +++E A+K I R + E +E+ N+
Sbjct: 23 LVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINH------------- 69
Query: 78 RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXX 137
R++ HP + R + V+ T + ++Y G +L + + FS+D RF
Sbjct: 70 ---RSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL--FERICNAGRFSEDEARFFFQQL 124
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
H M + +RDLK EN L+D + +L S +VL + +S
Sbjct: 125 ISGVSYAHAMQVAHRDLKLEN---------TLLDGSPAPRLKIADFGYSKASVLHSQPKS 175
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
VGT Y+APE++
Sbjct: 176 A----------------------------------------------VGTPAYIAPEVLL 189
Query: 258 GKGHDFAV-DWWSLGVVLHEMLYGATPFRGSSR----KETFYRIL---CRPPDLVGEPTP 309
K +D V D WS GV L+ ML GA PF ++T +RIL PD V
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPE 249
Query: 310 LRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
R+LI R+ DP KRI + EI+ HE+F
Sbjct: 250 CRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 83/147 (56%), Gaps = 12/147 (8%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT +Y+APE++ K ++ ++DWWS G++++EML G TPF S+ +T+ +IL R P
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP 224
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNWELLLKISRPPNIPAR 357
E +++L+ RL+ +D ++R+ G E++K H +FK V WE LL SR P
Sbjct: 225 FFNE--DVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLL--SRNIETPYE 280
Query: 358 FEHENNESDGRGRDGTKEIDVEKFVQG 384
+ + D D E D+ VQG
Sbjct: 281 PPIQQGQGDTSQFDKYPEEDINYGVQG 307
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 15/162 (9%)
Query: 14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
DF LR LG G+ G V L++ + +A+KV+ ++++ + + ND
Sbjct: 7 DFQILR---TLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTND-------- 55
Query: 74 SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFX 133
E+ +L V HP + R+ G + + +DY G +L SL ++ Q F + +F
Sbjct: 56 --ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFY 111
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I+YRDLKPENI++ +NGHI + DF +
Sbjct: 112 AAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFA 153
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 67/107 (62%), Gaps = 8/107 (7%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
F GT +Y+APEI+ G+ ++ +VDWWS GV+L+EML G +PF G +E F+ I P
Sbjct: 178 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNP-- 235
Query: 304 VGEPTPL----RNLIRRLLEKDPTKRIGVE-EIKGHEFFKGVNWELL 345
P L ++L+ +L ++P KR+GV +I+ H F+ +NWE L
Sbjct: 236 -FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEEL 281
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 76/153 (49%), Gaps = 13/153 (8%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G+ G VFL + ++++ FA+K + +D++ L ++D E+RVL
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVV------LMDDD----VECTMVEKRVLSLA 74
Query: 84 -EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
EHP L + T + + + ++Y G DL + QS F F
Sbjct: 75 WEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIILGLQ 132
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GIVYRDLK +NI++ ++GHI + DF +
Sbjct: 133 FLHSKGIVYRDLKLDNILLDKDGHIKIADFGMC 165
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 131/322 (40%), Gaps = 76/322 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
I LG G+ G V L ++ + ALK I R L++K D + R+ E
Sbjct: 13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKK----------SDMHMRVEREISY 62
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ + HP + +L V++T + I+Y G + +++ +M D+ RF
Sbjct: 63 LKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKK--RMTEDEGRRFFQQIICA 120
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H IV+RDLKPEN+++ +N ++ + DF L S I
Sbjct: 121 IEYC-HRHKIVHRDLKPENLLLDDNLNVKIADFGL----------------------SNI 157
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
+FL C S Y APE+I GK
Sbjct: 158 MTDGNFLKTSCGS-----------------------------------PNYAAPEVINGK 182
Query: 260 GHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRI---LCRPPDLVGEPTPLRNLIR 315
+ VD WS G+VL+ ML G PF F ++ + PD + ++LIR
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGA--QSLIR 240
Query: 316 RLLEKDPTKRIGVEEIKGHEFF 337
R++ DP +RI ++EI+ +F
Sbjct: 241 RMIVADPMQRITIQEIRRDPWF 262
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 123/324 (37%), Gaps = 79/324 (24%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG GA V L +D + + A+K I ++ +E K + N E VL +
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN------------EIAVLHKI 73
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+HP + L + + + + G +L + + +++
Sbjct: 74 KHPNIVALDDIYESGGHLYLIMQLVSGGEL--FDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 144 XHNMGIVYRDLKPENIM---IQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H++GIV+RDLKPEN++ + E+ IM+ DF LS P
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG------------------- 172
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKG 260
S LS C GT YVAPE++ K
Sbjct: 173 ---SVLSTAC-----------------------------------GTPGYVAPEVLAQKP 194
Query: 261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-----CRPPDLVGEPTPLRNLIR 315
+ AVD WS+GV+ + +L G PF + + F +IL P ++ IR
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 316 RLLEKDPTKRIGVEEIKGHEFFKG 339
L+EKDP KR E+ H + G
Sbjct: 255 HLMEKDPEKRFTCEQALQHPWIAG 278
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 123/324 (37%), Gaps = 79/324 (24%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG GA V L +D + + A+K I ++ +E K + N E VL +
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN------------EIAVLHKI 73
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+HP + L + + + + G +L + + +++
Sbjct: 74 KHPNIVALDDIYESGGHLYLIMQLVSGGEL--FDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 144 XHNMGIVYRDLKPENIM---IQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H++GIV+RDLKPEN++ + E+ IM+ DF LS P
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG------------------- 172
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKG 260
S LS C GT YVAPE++ K
Sbjct: 173 ---SVLSTAC-----------------------------------GTPGYVAPEVLAQKP 194
Query: 261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-----CRPPDLVGEPTPLRNLIR 315
+ AVD WS+GV+ + +L G PF + + F +IL P ++ IR
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 316 RLLEKDPTKRIGVEEIKGHEFFKG 339
L+EKDP KR E+ H + G
Sbjct: 255 HLMEKDPEKRFTCEQALQHPWIAG 278
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 123/324 (37%), Gaps = 79/324 (24%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG GA V L +D + + A+K I ++ +E K + N E VL +
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN------------EIAVLHKI 73
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+HP + L + + + + G +L + + +++
Sbjct: 74 KHPNIVALDDIYESGGHLYLIMQLVSGGEL--FDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 144 XHNMGIVYRDLKPENIM---IQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H++GIV+RDLKPEN++ + E+ IM+ DF LS P
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG------------------- 172
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKG 260
S LS C GT YVAPE++ K
Sbjct: 173 ---SVLSTAC-----------------------------------GTPGYVAPEVLAQKP 194
Query: 261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-----CRPPDLVGEPTPLRNLIR 315
+ AVD WS+GV+ + +L G PF + + F +IL P ++ IR
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 316 RLLEKDPTKRIGVEEIKGHEFFKG 339
L+EKDP KR E+ H + G
Sbjct: 255 HLMEKDPEKRFTCEQALQHPWIAG 278
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
GT Y+APE++ KGH F VD WSLG +L+ +L G PF S KET+ RI +
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSV 261
Query: 304 VGEPTPLRN-LIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARF 358
P+ + LIRR+L DPT R V E+ EFF + L S +P RF
Sbjct: 262 PRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTSC-LTVPPRF 316
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G + + D+++ E FA KV+ + ++ K ++ ++S E + +++
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK----------EKMSTEIAIHKSL 99
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
++P + G D FV ++ C R L L K++ + ++ R+
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQY 157
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
HN +++RDLK N+ + ++ + + DF L+TK+
Sbjct: 158 LHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI 192
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
GT Y+APE++ KGH F VD WSLG +L+ +L G PF S KET+ RI +
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSV 261
Query: 304 VGEPTPLRN-LIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARF 358
P+ + LIRR+L DPT R V E+ EFF + L S +P RF
Sbjct: 262 PRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTSC-LTVPPRF 316
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G + + D+++ E FA KV+ + ++ K ++ ++S E + +++
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK----------EKMSTEIAIHKSL 99
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
++P + G D FV ++ C R L L K++ + ++ R+
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQY 157
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
HN +++RDLK N+ + ++ + + DF L+TK+
Sbjct: 158 LHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI 192
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
GT Y+APE++ KGH F VD WSLG +L+ +L G PF S KET+ RI +
Sbjct: 202 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSV 261
Query: 304 VGEPTPLRN-LIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARF 358
P+ + LIRR+L DPT R V E+ EFF + L S +P RF
Sbjct: 262 PRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTSC-LTVPPRF 316
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G + + D+++ E FA KV+ + ++ K ++ ++S E + +++
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK----------EKMSTEIAIHKSL 99
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
++P + G D FV ++ C R L L K++ + ++ R+
Sbjct: 100 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQY 157
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
HN +++RDLK N+ + ++ + + DF L+TK+
Sbjct: 158 LHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI 192
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
GT Y+APE++ KGH F VD WSLG +L+ +L G PF S KET+ RI +
Sbjct: 186 LCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSV 245
Query: 304 VGEPTPLRN-LIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARF 358
P+ + LIRR+L DPT R V E+ EFF + L S +P RF
Sbjct: 246 PRHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTSC-LTVPPRF 300
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G + + D+++ E FA KV+ + ++ K ++ ++S E + +++
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK----------EKMSTEIAIHKSL 83
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
++P + G D FV ++ C R L L K++ + ++ R+
Sbjct: 84 DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQY 141
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
HN +++RDLK N+ + ++ + + DF L+TK+
Sbjct: 142 LHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI 176
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 135/353 (38%), Gaps = 96/353 (27%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWR--DLIEKKSKELTNNDNGDKYRRISFEQR 78
V +G G GV L++D + E A+K I R + E +E+ N+
Sbjct: 25 VKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINH-------------- 70
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
R++ HP + R + V+ T + ++Y G +L+ + + FS+D RF
Sbjct: 71 --RSLRHPNIVRFKEVILTPTHLAIIMEYASGGELY--ERICNAGRFSEDEARFFFQQLL 126
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
H+M I +RDLK EN ++ SP L
Sbjct: 127 SGVSYCHSMQICHRDLKLENTLLD----------------------GSPAPRL------- 157
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
K C G S +H VGT Y+APE++
Sbjct: 158 ---------KICDFGYSKSSVLHSQPKST-----------------VGTPAYIAPEVLLR 191
Query: 259 KGHDFAV-DWWSLGVVLHEMLYGATPFRGSSR----KETFYRILC---RPPDLVGEPTPL 310
+ +D + D WS GV L+ ML GA PF ++T RIL PD +
Sbjct: 192 QEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPEC 251
Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENN 363
+LI R+ DP RI + EIK H +F LK N+PA +E+N
Sbjct: 252 CHLISRIFVADPATRISIPEIKTHSWF--------LK-----NLPADLMNESN 291
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 122/324 (37%), Gaps = 79/324 (24%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG GA V L +D + + A+K I + +E K + N E VL +
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMEN------------EIAVLHKI 73
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+HP + L + + + + G +L + + +++
Sbjct: 74 KHPNIVALDDIYESGGHLYLIMQLVSGGEL--FDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 144 XHNMGIVYRDLKPENIM---IQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H++GIV+RDLKPEN++ + E+ IM+ DF LS P
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG------------------- 172
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKG 260
S LS C GT YVAPE++ K
Sbjct: 173 ---SVLSTAC-----------------------------------GTPGYVAPEVLAQKP 194
Query: 261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-----CRPPDLVGEPTPLRNLIR 315
+ AVD WS+GV+ + +L G PF + + F +IL P ++ IR
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 316 RLLEKDPTKRIGVEEIKGHEFFKG 339
L+EKDP KR E+ H + G
Sbjct: 255 HLMEKDPEKRFTCEQALQHPWIAG 278
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 10/106 (9%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPP 301
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 199 AGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP 258
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 259 SHFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRD-LIEKKSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK ES +A+K++ + +++ K E T N E+R+
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y G ++ S ++ FS+ RF
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRD-LIEKKSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK ES +A+K++ + +++ K E T N E+R+
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y G ++ S ++ FS+ RF
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEK-KSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK ES +A+K++ + + K K E T N E+R+
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y G ++ S ++ FS+ RF
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 68/119 (57%), Gaps = 11/119 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW-ELLLKISRPPNIP 355
+ L++L+R LL+ D TKR GV +IK H++F +W + + P IP
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEK-KSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK ES +A+K++ + + K K E T N E+R+
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y G ++ S ++ F + RF
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 68/119 (57%), Gaps = 11/119 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW-ELLLKISRPPNIP 355
+ L++L+R LL+ D TKR GV +IK H++F +W + + P IP
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIP 316
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEK-KSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK ES +A+K++ + + K K E T N E+R+
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y G ++ S ++ FS+ RF
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 261 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEK-KSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK ES +A+K++ + + K K E T N E+R+
Sbjct: 47 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 95
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y G ++ S ++ FS+ RF
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVL 153
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 193 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 252
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 253 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 295
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRD-LIEKKSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK E+ +A+K++ + +++ K E T N E+R+
Sbjct: 39 IKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 87
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y PG ++ S ++ FS+ RF
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVL 145
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 146 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 188
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEK-KSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK ES +A+K++ + + K K E T N E+R+
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y G ++ S ++ F++ RF
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FAEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 261 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEK-KSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK +E+ +A+K++ + + K K E T N E+R+
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 95
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y PG ++ S ++ FS+ RF
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVL 153
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN+MI + G+I + DF + ++ +T
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 196
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDW 302
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRD-LIEKKSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK +E+ +A+K++ + +++ K E T N E+R+
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y G ++ S ++ FS+ RF
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 261 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRD-LIEKKSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK +E+ +A+K++ + +++ K E T N E+R+
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 95
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y PG ++ S ++ FS+ RF
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVL 153
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEK-KSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK E+ FA+K++ + + K K E T N E+R+
Sbjct: 46 IKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y PG ++ S ++ FS+ RF
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDW 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEK-KSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK E+ FA+K++ + + K K E T N E+R+
Sbjct: 46 IKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y PG ++ S ++ FS+ RF
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLPNGVNDIKNHKWFATTDW 302
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEK-KSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK ES +A+K++ + + K K E T N E+R+
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y G ++ S ++ FS+ RF
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 193 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 252
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 253 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 295
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 81/163 (49%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRD-LIEKKSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK E+ +A+K++ + +++ K E T N E+R+
Sbjct: 39 IKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 87
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y PG ++ S ++ F + RF
Sbjct: 88 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FXEPHARFYAAQIVL 145
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 146 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 188
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 261 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRD-LIEKKSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK E+ +A+K++ + +++ K E T N E+R+
Sbjct: 47 IKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 95
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y PG ++ S ++ FS+ RF
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVL 153
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 195 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 254
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 255 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 297
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRD-LIEKKSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK ES +A+K++ + +++ K E T N E+R+
Sbjct: 41 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 89
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y G ++ S ++ F + RF
Sbjct: 90 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQIVL 147
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 148 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 190
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 261 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEK-KSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK E+ +A+K++ + + K K E T N E+R+
Sbjct: 47 IKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 95
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y PG ++ S ++ FS+ RF
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVL 153
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN+MI + G+I + DF + ++ +T
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 196
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 261 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEK-KSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK E+ +A+K++ + + K K E T N E+R+
Sbjct: 47 IKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 95
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y PG ++ S ++ FS+ RF
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVL 153
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRD-LIEKKSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK ES +A+K++ + +++ K E T N E+R+
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y G ++ S ++ F + RF
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEK-KSKELTNNDNGDKYRRISFEQRV 79
+ +G G+ G V LVK +E+ +A+K++ + + K K E T N E+R+
Sbjct: 46 IKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y PG D+ S ++ FS+ RF
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGR--FSEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT 195
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEK-KSKELTNNDNGDKYRRISFEQRV 79
+ +G G+ G V LVK +E+ +A+K++ + + K K E T N E+R+
Sbjct: 46 IKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y PG ++ S ++ FS+ RF
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT 195
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRD-LIEKKSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK +E+ +A+K++ + +++ K E T N E+R+
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y PG ++ S ++ F + RF
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FXEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN+MI + G+I + DF + ++ +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 195
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEK-KSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK +E+ +A+K++ + + K K E T N E+R+
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y PG ++ S ++ FS+ RF
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN+MI + G+I + DF + ++ +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 195
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRD-LIEKKSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK +E+ +A+K++ + +++ K E T N E+R+
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y PG ++ S ++ FS+ RF
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+ LG G+ G V LVK +E+ +A+K++ + + K KE+ + N E+R+L
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKV-VKLKEIEHTLN---------EKRIL 95
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ V P L +L + + ++Y PG ++ S ++ FS+ RF
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLT 153
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN+MI + G+I + DF L+ ++ +T
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRT 195
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEK-KSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK +E+ +A+K++ + + K K E T N E+R+
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y PG ++ S ++ FS+ RF
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN+MI + G+I + DF + ++ +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 280
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 281 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 323
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRD-LIEKKSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK ES +A+K++ + +++ K E T N E+R+
Sbjct: 67 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 115
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y G ++ S ++ FS+ RF
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVL 173
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ T
Sbjct: 174 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGAT 216
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 261 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEK-KSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK +E+ +A+K++ + + K K E T N E+R+
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 95
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y PG ++ S ++ FS+ RF
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVL 153
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN+MI + G+I + DF + ++ +T
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 196
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 261 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEK-KSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK +E+ +A+K++ + + K K E T N E+R+
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 95
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y PG ++ S ++ F + RF
Sbjct: 96 LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FXEPHARFYAAQIVL 153
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN+MI + G+I + DF + ++ +T
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 196
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEK-KSKELTNNDNGDKYRRISFEQRV 79
+ +G G+ G V LVK +E+ +A+K++ + + K K E T N E+R+
Sbjct: 46 IKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y PG D+ S ++ FS+ RF
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGR--FSEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT 195
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 261 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEK-KSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK +E+ +A+K++ + + K K E T N E+R+
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 95
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y PG ++ S ++ FS+ RF
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVL 153
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRD-LIEKKSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK ES +A+K++ + +++ K E T N E+R+
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y G ++ S ++ F + RF
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEK-KSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK ES +A+K++ + + K K E T N E+R+
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y G ++ S ++ FS+ RF
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 261 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRD-LIEKKSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK +E+ +A+K++ + +++ K E T N E+R+
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 95
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y PG ++ S ++ F + RF
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FXEPHARFYAAQIVL 153
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+ LG G+ G V LVK +E+ +A+K++ + + K KE+ + N E+R+L
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKV-VKLKEIEHTLN---------EKRIL 95
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ V P L +L + + ++Y PG ++ S ++ FS+ RF
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLT 153
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN+MI + G+I + DF L+ ++ +T
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRT 195
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 280
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 281 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 323
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRD-LIEKKSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK ES +A+K++ + +++ K E T N E+R+
Sbjct: 67 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 115
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y G ++ S ++ F + RF
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQIVL 173
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 174 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 216
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 187 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 246
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 247 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 289
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRD-LIEKKSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK ES +A+K++ + +++ K E T N E+R+
Sbjct: 33 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 81
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y G ++ S ++ FS+ RF
Sbjct: 82 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVL 139
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I E G+I + DF + ++ +T
Sbjct: 140 TFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRT 182
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDW 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRD-LIEKKSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK +E+ +A+K++ + +++ K E T N E+R+
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y PG ++ S ++ FS+ RF
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEK-KSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK ES +A+K++ + + K K E T N E+R+
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y G ++ S ++ FS+ RF
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDW 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRD-LIEKKSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK E+ FA+K++ + +++ K E T N E+R+
Sbjct: 46 IKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y PG ++ S ++ FS+ RF
Sbjct: 95 LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEK-KSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK +E+ +A+K++ + + K K E T N E+R+
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y PG ++ S ++ F + RF
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FXEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEK-KSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK +E+ +A+K++ + + K K E T N E+R+
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y PG ++ S ++ F + RF
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FXEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEK-KSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK +E+ +A+K++ + + K K E T N E+R+
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y PG ++ S ++ FS+ RF
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 261 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 303
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEK-KSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK E+ +A+K++ + + K K E T N E+R+
Sbjct: 47 IRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 95
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
+ V P L +L + + ++Y PG ++ S ++ FS+ RF
Sbjct: 96 QQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVL 153
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT 196
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
GT Y+APE++ KGH F VD WS+G +++ +L G PF S KET+ RI +
Sbjct: 199 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI 258
Query: 304 VGEPTPL-RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHEN 362
P+ +LI+++L+ DPT R + E+ EFF L I+ IP RF
Sbjct: 259 PKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITC-LTIPPRFSIAP 317
Query: 363 NESDGRGR 370
+ D R
Sbjct: 318 SSLDPSNR 325
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G F + D ++ E FA K++ + L+ K + ++S E + R++
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQR----------EKMSMEISIHRSL 96
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
H + G + FV ++ C R L L K++ + ++ R+
Sbjct: 97 AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQY 154
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
H +++RDLK N+ + E+ + + DF L+TK+
Sbjct: 155 LHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 189
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 186 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 245
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 246 HFS--SDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDW 288
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRD-LIEKKSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK +E+ +A+K++ + +++ K E T N E+R+
Sbjct: 32 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 80
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y PG ++ S ++ FS+ RF
Sbjct: 81 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVL 138
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 139 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 181
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
GT Y+APE++ KGH F VD WS+G +++ +L G PF S KET+ RI +
Sbjct: 201 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI 260
Query: 304 VGEPTPL-RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHEN 362
P+ +LI+++L+ DPT R + E+ EFF L I+ IP RF
Sbjct: 261 PKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITC-LTIPPRFSIAP 319
Query: 363 NESDGRGR 370
+ D R
Sbjct: 320 SSLDPSNR 327
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G F + D ++ E FA K++ + L+ K + ++S E + R++
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQR----------EKMSMEISIHRSL 98
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
H + G + FV ++ C R L L K++ + ++ R+
Sbjct: 99 AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQY 156
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
H +++RDLK N+ + E+ + + DF L+TK+
Sbjct: 157 LHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 191
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
GT Y+APE++ KGH F VD WS+G +++ +L G PF S KET+ RI +
Sbjct: 181 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI 240
Query: 304 VGEPTPL-RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHEN 362
P+ +LI+++L+ DPT R + E+ EFF L I+ IP RF
Sbjct: 241 PKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITC-LTIPPRFSIAP 299
Query: 363 NESDGRGR 370
+ D R
Sbjct: 300 SSLDPSNR 307
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G F + D ++ E FA K++ + L+ K + ++S E + R++
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQR----------EKMSMEISIHRSL 78
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
H + G + FV ++ C R L L K++ + ++ R+
Sbjct: 79 AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQY 136
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
H +++RDLK N+ + E+ + + DF L+TK+
Sbjct: 137 LHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 171
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 2/128 (1%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
GT Y+APE++ KGH F VD WS+G +++ +L G PF S KET+ RI +
Sbjct: 177 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI 236
Query: 304 VGEPTPL-RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHEN 362
P+ +LI+++L+ DPT R + E+ EFF L I+ IP RF
Sbjct: 237 PKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITC-LTIPPRFSIAP 295
Query: 363 NESDGRGR 370
+ D R
Sbjct: 296 SSLDPSNR 303
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G F + D ++ E FA K++ + L+ K + ++S E + R++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQR----------EKMSMEISIHRSL 74
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
H + G + FV ++ C R L L K++ + ++ R+
Sbjct: 75 AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQY 132
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
H +++RDLK N+ + E+ + + DF L+TK+
Sbjct: 133 LHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 167
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 280
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 281 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 323
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRD-LIEKKSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK E+ +A+K++ + +++ K E T N E+R+
Sbjct: 67 IKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 115
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y PG ++ S ++ FS+ RF
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVL 173
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 174 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 216
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 14/124 (11%)
Query: 245 VGTEEYVAPEIIE----GKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR 299
VGT +Y++PEI++ GKG + DWWSLGV ++EMLYG TPF S ET+ +I+
Sbjct: 237 VGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 296
Query: 300 ------PPDLVGEPTPLRNLIRRLLEKDPTK--RIGVEEIKGHEFFKGVNWELLLKISRP 351
P + ++LIRRL+ + + G+E+ K H FF G++W+ ++
Sbjct: 297 KERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWD-NIRNCEA 355
Query: 352 PNIP 355
P IP
Sbjct: 356 PYIP 359
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Query: 14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
DF L+++ GRGA G V +VK + + FA+K++ + + K+++ +
Sbjct: 75 DFEILKVI---GRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFRE-------- 123
Query: 74 SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFX 133
E+ VL N + + L D + +DY G DL +L + +++ ++ RF
Sbjct: 124 --ERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRL-PEEMARFY 180
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
H + V+RD+KP+NI++ NGHI L DF KL
Sbjct: 181 LAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKL 225
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 15/137 (10%)
Query: 245 VGTEEYVAPEIIE----GKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR 299
VGT +Y++PEI++ G G + DWWSLGV ++EMLYG TPF S ET+ +I+
Sbjct: 253 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 312
Query: 300 ------PPDLVGEPTPLRNLIRRLLEKDPTK--RIGVEEIKGHEFFKGVNWELLLKISRP 351
P + ++LI+RL+ + + G+E+ K H FF+G+NWE + + P
Sbjct: 313 EERFQFPSHVTDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLNWENIRNLEAP 372
Query: 352 --PNIPARFEHENNESD 366
P++ + + N + D
Sbjct: 373 YIPDVSSPSDTSNFDVD 389
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 11/162 (6%)
Query: 18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
I+ +GRGA G V +VK + +A+K++ + + K+++ + E+
Sbjct: 92 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFRE----------ER 141
Query: 78 RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXX 137
VL N + + L + + +DY G DL +L + +++ +D RF
Sbjct: 142 DVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKL-PEDMARFYIGEM 200
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
H + V+RD+KP+N+++ NGHI L DF K++
Sbjct: 201 VLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMN 242
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 15/137 (10%)
Query: 245 VGTEEYVAPEIIE----GKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR 299
VGT +Y++PEI++ G G + DWWSLGV ++EMLYG TPF S ET+ +I+
Sbjct: 237 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 296
Query: 300 ------PPDLVGEPTPLRNLIRRLLEKDPTK--RIGVEEIKGHEFFKGVNWELLLKISRP 351
P + ++LI+RL+ + + G+E+ K H FF+G+NWE + + P
Sbjct: 297 EERFQFPSHVTDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLNWENIRNLEAP 356
Query: 352 --PNIPARFEHENNESD 366
P++ + + N + D
Sbjct: 357 YIPDVSSPSDTSNFDVD 373
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 11/162 (6%)
Query: 18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
I+ +GRGA G V +VK + +A+K++ + + K+++ + E+
Sbjct: 76 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFRE----------ER 125
Query: 78 RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXX 137
VL N + + L + + +DY G DL +L + +++ +D RF
Sbjct: 126 DVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKL-PEDMARFYIGEM 184
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
H + V+RD+KP+N+++ NGHI L DF K++
Sbjct: 185 VLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMN 226
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 63/105 (60%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV++++M G PF + + +I+ R P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRD-LIEKKSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK ES +A+K++ + +++ K E T N E+R+
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y G ++ S ++ FS+ RF
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 140/371 (37%), Gaps = 80/371 (21%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LGRG G VF + + + +A K Y+ E+++L V
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACK----------KLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIRFXXXXXXXXX 141
+ L T + + G D+ H + F + F
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 142 XXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
H I+YRDLKPEN+++ ++G++ + D L A ++G K
Sbjct: 303 EHLHQRNIIYRDLKPENVLLDDDGNVRISDLGL-----------------AVELKAGQTK 345
Query: 202 RRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGH 261
+ + GT ++APE++ G+ +
Sbjct: 346 TKGY---------------------------------------AGTPGFMAPELLLGEEY 366
Query: 262 DFAVDWWSLGVVLHEMLYGATPFRGSSR----KETFYRILCRPPDLVGEPTPL-RNLIRR 316
DF+VD+++LGV L+EM+ PFR KE R+L + + +P ++
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEA 426
Query: 317 LLEKDPTKRIGVEE-----IKGHEFFKGVNW-ELLLKISRPPNIP-ARFEHENNESDGRG 369
LL+KDP KR+G + ++ H F+ ++W +L + PP +P +R + N D
Sbjct: 427 LLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDSRTVYAKNIQDVGA 486
Query: 370 RDGTKEIDVEK 380
K + EK
Sbjct: 487 FSTVKGVAFEK 497
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
GT Y+APE++ KGH F VD WS+G +++ +L G PF S KET+ RI +
Sbjct: 175 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI 234
Query: 304 VGEPTPL-RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARF 358
P+ +LI+++L+ DPT R + E+ EFF L I+ IP RF
Sbjct: 235 PKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITC-LTIPPRF 289
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G F + D ++ E FA K++ + L+ K + ++S E + R++
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQR----------EKMSMEISIHRSL 72
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
H + G + FV ++ C R L L K++ + ++ R+
Sbjct: 73 AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQY 130
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
H +++RDLK N+ + E+ + + DF L+TK+
Sbjct: 131 LHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 165
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 140/371 (37%), Gaps = 80/371 (21%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LGRG G VF + + + +A K Y+ E+++L V
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACK----------KLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIRFXXXXXXXXX 141
+ L T + + G D+ H + F + F
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 142 XXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
H I+YRDLKPEN+++ ++G++ + D L A ++G K
Sbjct: 303 EHLHQRNIIYRDLKPENVLLDDDGNVRISDLGL-----------------AVELKAGQTK 345
Query: 202 RRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGH 261
+ + GT ++APE++ G+ +
Sbjct: 346 TKGY---------------------------------------AGTPGFMAPELLLGEEY 366
Query: 262 DFAVDWWSLGVVLHEMLYGATPFRGSSR----KETFYRILCRPPDLVGEPTPL-RNLIRR 316
DF+VD+++LGV L+EM+ PFR KE R+L + + +P ++
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEA 426
Query: 317 LLEKDPTKRIGVEE-----IKGHEFFKGVNW-ELLLKISRPPNIP-ARFEHENNESDGRG 369
LL+KDP KR+G + ++ H F+ ++W +L + PP +P +R + N D
Sbjct: 427 LLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDSRTVYAKNIQDVGA 486
Query: 370 RDGTKEIDVEK 380
K + EK
Sbjct: 487 FSTVKGVAFEK 497
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 140/371 (37%), Gaps = 80/371 (21%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LGRG G VF + + + +A K Y+ E+++L V
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACK----------KLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIRFXXXXXXXXX 141
+ L T + + G D+ H + F + F
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 142 XXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
H I+YRDLKPEN+++ ++G++ + D L A ++G K
Sbjct: 303 EHLHQRNIIYRDLKPENVLLDDDGNVRISDLGL-----------------AVELKAGQTK 345
Query: 202 RRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGH 261
+ + GT ++APE++ G+ +
Sbjct: 346 TKGY---------------------------------------AGTPGFMAPELLLGEEY 366
Query: 262 DFAVDWWSLGVVLHEMLYGATPFRGSSR----KETFYRILCRPPDLVGEPTPL-RNLIRR 316
DF+VD+++LGV L+EM+ PFR KE R+L + + +P ++
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEA 426
Query: 317 LLEKDPTKRIGVEE-----IKGHEFFKGVNW-ELLLKISRPPNIP-ARFEHENNESDGRG 369
LL+KDP KR+G + ++ H F+ ++W +L + PP +P +R + N D
Sbjct: 427 LLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVPDSRTVYAKNIQDVGA 486
Query: 370 RDGTKEIDVEK 380
K + EK
Sbjct: 487 FSTVKGVAFEK 497
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+AP II KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEK-KSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK ES +A+K++ + + K K E T N E+R+
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y G ++ S ++ FS+ RF
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
GT Y+APE++ KGH F VD WS+G +++ +L G PF S KET+ RI +
Sbjct: 177 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSI 236
Query: 304 VGEPTPL-RNLIRRLLEKDPTKRIGVEEIKGHEFF 337
P+ +LI+++L+ DPT R + E+ EFF
Sbjct: 237 PKHINPVAASLIQKMLQTDPTARPTINELLNDEFF 271
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G F + D ++ E FA K++ + L+ K + ++S E + R++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQR----------EKMSMEISIHRSL 74
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
H + G + FV ++ C R L L K++ + ++ R+
Sbjct: 75 AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQY 132
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
H +++RDLK N+ + E+ + + DF L+TK+
Sbjct: 133 LHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV 167
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 260
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +I H++F +W
Sbjct: 261 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIXNHKWFATTDW 303
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRD-LIEKKSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK E+ +A+K++ + +++ K E T N E+R+
Sbjct: 47 IKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 95
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y PG ++ S ++ FS+ RF
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVL 153
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT EY+APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TK GV +IK H++F +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKAFGNLKNGVNDIKNHKWFATTDW 302
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 14/163 (8%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEK-KSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK ES +A+K++ + + K K E T N E+R+
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y G ++ S ++ FS+ RF
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
H++ ++YRDLKPEN++I + G+I + DF + ++ +T
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 131/345 (37%), Gaps = 79/345 (22%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LGRG G VF + + + +A K Y+ E+++L V
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACK----------KLNKKRLKKRKGYQGAMVEKKILAKV 242
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIRFXXXXXXXXX 141
+ L T + + G D+ H + F + F
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 142 XXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
H I+YRDLKPEN+++ ++G++ + D L A ++G K
Sbjct: 303 EHLHQRNIIYRDLKPENVLLDDDGNVRISDLGL-----------------AVELKAGQTK 345
Query: 202 RRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGH 261
+ + GT ++APE++ G+ +
Sbjct: 346 TKGY---------------------------------------AGTPGFMAPELLLGEEY 366
Query: 262 DFAVDWWSLGVVLHEMLYGATPFRGSSR----KETFYRILCRPPDLVGEPTPL-RNLIRR 316
DF+VD+++LGV L+EM+ PFR KE R+L + + +P ++
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEA 426
Query: 317 LLEKDPTKRIGVEE-----IKGHEFFKGVNW-ELLLKISRPPNIP 355
LL+KDP KR+G + ++ H F+ ++W +L + PP +P
Sbjct: 427 LLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVP 471
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 10/105 (9%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT E +APEII KG++ AVDWW+LGV+++EM G PF + + +I+ R P
Sbjct: 200 GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNW 342
+ L++L+R LL+ D TKR GV +IK H++F +W
Sbjct: 260 HFS--SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 21/187 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEK-KSKELTNNDNGDKYRRISFEQRV 79
+ LG G+ G V LVK ES +A+K++ + + K K E T N E+R+
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-----------EKRI 94
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ V P L +L + + ++Y G ++ S ++ FS+ RF
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVL 152
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPK------TPQA-SPKTVLA 192
H++ ++YRDLKPEN++I + G+I + DF + ++ + TP+A +P+ +L+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEIILS 212
Query: 193 ANTRSGI 199
+
Sbjct: 213 KGYNKAV 219
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 121/324 (37%), Gaps = 79/324 (24%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG GA V L ++ + + FA+K I + ++ K + N E VLR +
Sbjct: 30 LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIEN------------EIAVLRKI 77
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+H + L + + + + G +L + + +++
Sbjct: 78 KHENIVALEDIYESPNHLYLVMQLVSGGEL--FDRIVEKGFYTEKDASTLIRQVLDAVYY 135
Query: 144 XHNMGIVYRDLKPENIMI---QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H MGIV+RDLKPEN++ E IM+ DF L S ++
Sbjct: 136 LHRMGIVHRDLKPENLLYYSQDEESKIMISDFGL----------------------SKME 173
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKG 260
+ +S C GT YVAPE++ K
Sbjct: 174 GKGDVMSTAC-----------------------------------GTPGYVAPEVLAQKP 198
Query: 261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-----CRPPDLVGEPTPLRNLIR 315
+ AVD WS+GV+ + +L G PF + + F +IL P ++ IR
Sbjct: 199 YSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIR 258
Query: 316 RLLEKDPTKRIGVEEIKGHEFFKG 339
L+EKDP KR E+ H + G
Sbjct: 259 NLMEKDPNKRYTCEQAARHPWIAG 282
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 124/325 (38%), Gaps = 84/325 (25%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V LG GA G V L KD + A+K+I KKS T +++G ++ VL
Sbjct: 9 VKKLGSGAYGEVLLCKDKLTGAERAIKII------KKSSVTTTSNSGALLDEVA----VL 58
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS---LRKQQSEQMFSDDTIRFXXXXX 137
+ ++HP + +L + ++ G +L LR Q FS+
Sbjct: 59 KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR-----QKFSEVDAAVIMKQV 113
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV---LAAN 194
H IV+RDLKPEN++ L K+ A K V L+A+
Sbjct: 114 LSGTTYLHKHNIVHRDLKPENLL-----------------LESKSRDALIKIVDFGLSAH 156
Query: 195 TRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPE 254
G K + +GT Y+APE
Sbjct: 157 FEVGGKMKER----------------------------------------LGTAYYIAPE 176
Query: 255 IIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-----LCRPPDLVGEPTP 309
++ K +D D WS GV+L+ +L G PF G + +E R+ PPD
Sbjct: 177 VLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDE 235
Query: 310 LRNLIRRLLEKDPTKRIGVEEIKGH 334
+ L++ +L +P+KRI EE H
Sbjct: 236 AKQLVKLMLTYEPSKRISAEEALNH 260
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 132/338 (39%), Gaps = 76/338 (22%)
Query: 19 RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
+IV LG G+ G V L + + ALK+I + ++ K D RI E
Sbjct: 11 QIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK----------SDMQGRIEREIS 60
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
LR + HP + +L V+ + + I+Y G +L Q+ ++M + RF
Sbjct: 61 YLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQR-DKMSEQEARRFFQQIIS 118
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
H IV+RDLKPEN+++ E+ ++ + DF LS
Sbjct: 119 AVEYC-HRHKIVHRDLKPENLLLDEHLNVKIADFGLSN---------------------- 155
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
I +FL C S Y APE+I G
Sbjct: 156 IMTDGNFLKTSCGS-----------------------------------PNYAAPEVISG 180
Query: 259 KGHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRR 316
K + VD WS GV+L+ ML PF S F I L +P LI+R
Sbjct: 181 KLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKR 240
Query: 317 LLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI 354
+L +P RI + EI ++FK E LL PP++
Sbjct: 241 MLIVNPLNRISIHEIMQDDWFKVDLPEYLL----PPDL 274
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 132/317 (41%), Gaps = 76/317 (23%)
Query: 19 RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
R++ +G+G V L + + + + A+++I + + N +++ E R
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQL-----------NSSSLQKLFREVR 65
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
+++ + HP + +L V+ T+K + ++Y G ++ + +F
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
H IV+RDLK EN+++ + +I + DF S + + G
Sbjct: 126 VQYC--HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFT-----------------FG 166
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
K L +FC G+ Y APE+ +G
Sbjct: 167 NK-----LDEFC-----------------------------------GSPPYAAPELFQG 186
Query: 259 KGHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTPLRNLI 314
K +D VD WSLGV+L+ ++ G+ PF G + KE R+L R P + T NL+
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS--TDCENLL 244
Query: 315 RRLLEKDPTKRIGVEEI 331
++ L +P+KR +E+I
Sbjct: 245 KKFLILNPSKRGTLEQI 261
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 132/338 (39%), Gaps = 76/338 (22%)
Query: 19 RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
+IV LG G+ G V L + + ALK+I + ++ K D RI E
Sbjct: 7 QIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK----------SDMQGRIEREIS 56
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
LR + HP + +L V+ + + I+Y G +L Q+ ++M + RF
Sbjct: 57 YLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQR-DKMSEQEARRFFQQIIS 114
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
H IV+RDLKPEN+++ E+ ++ + DF LS
Sbjct: 115 AVEYC-HRHKIVHRDLKPENLLLDEHLNVKIADFGLSN---------------------- 151
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
I +FL C S Y APE+I G
Sbjct: 152 IMTDGNFLKTSCGS-----------------------------------PNYAAPEVISG 176
Query: 259 KGHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRR 316
K + VD WS GV+L+ ML PF S F I L +P LI+R
Sbjct: 177 KLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKR 236
Query: 317 LLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI 354
+L +P RI + EI ++FK E LL PP++
Sbjct: 237 MLIVNPLNRISIHEIMQDDWFKVDLPEYLL----PPDL 270
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 125/322 (38%), Gaps = 72/322 (22%)
Query: 19 RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
+IV LG G+ G V L + + ALK+I + ++ K D RI E
Sbjct: 16 QIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK----------SDMQGRIEREIS 65
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
LR + HP + +L V+ + + I+Y G +L Q+ ++M + RF
Sbjct: 66 YLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQR-DKMSEQEARRFFQQIIS 123
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
H IV+RDLKPEN+++ E+ ++ + DF LS
Sbjct: 124 AVEYC-HRHKIVHRDLKPENLLLDEHLNVKIADFGLSN---------------------- 160
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
I +FL C S Y APE+I G
Sbjct: 161 IMTDGNFLKTSCGS-----------------------------------PNYAAPEVISG 185
Query: 259 KGHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRR 316
K + VD WS GV+L+ ML PF S F I L +P LI+R
Sbjct: 186 KLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKR 245
Query: 317 LLEKDPTKRIGVEEIKGHEFFK 338
+L +P RI + EI ++FK
Sbjct: 246 MLIVNPLNRISIHEIMQDDWFK 267
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 125/322 (38%), Gaps = 72/322 (22%)
Query: 19 RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
+IV LG G+ G V L + + ALK+I + ++ K D RI E
Sbjct: 17 QIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK----------SDMQGRIEREIS 66
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
LR + HP + +L V+ + + I+Y G +L Q+ ++M + RF
Sbjct: 67 YLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQR-DKMSEQEARRFFQQIIS 124
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
H IV+RDLKPEN+++ E+ ++ + DF LS
Sbjct: 125 AVEYC-HRHKIVHRDLKPENLLLDEHLNVKIADFGLSN---------------------- 161
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
I +FL C S Y APE+I G
Sbjct: 162 IMTDGNFLKTSCGS-----------------------------------PNYAAPEVISG 186
Query: 259 KGHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-LRNLIRR 316
K + VD WS GV+L+ ML PF S F I L +P LI+R
Sbjct: 187 KLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKR 246
Query: 317 LLEKDPTKRIGVEEIKGHEFFK 338
+L +P RI + EI ++FK
Sbjct: 247 MLIVNPLNRISIHEIMQDDWFK 268
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF ++ +ET+ RI
Sbjct: 183 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 242
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ +P++R + E+ H +
Sbjct: 243 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 279
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 82
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 140
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
H+ +++RD+KPEN+++ G + + DF S
Sbjct: 141 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 173
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF ++ +ET+ RI
Sbjct: 192 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 251
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ +P++R + E+ H +
Sbjct: 252 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 288
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 91
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 149
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
H+ +++RD+KPEN+++ G + + DF S
Sbjct: 150 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 182
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF + +ET+ RI
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTF 229
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ + ++R+ + E+ H + K
Sbjct: 230 PDFVTEGA--RDLISRLLKHNASQRLTLAEVLEHPWIKA 266
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE-------HQLRR---EVEIQSHL 69
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSRFDEQRTATYITELANALSY 127
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
H+ +++RD+KPEN+++ NG + + DF S
Sbjct: 128 CHSKRVIHRDIKPENLLLGSNGELKIADFGWSV 160
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF + +ET+ RI
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTF 229
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ + ++R+ + E+ H + K
Sbjct: 230 PDFVTEGA--RDLISRLLKHNASQRLTLAEVLEHPWIKA 266
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE-------HQLRR---EVEIQSHL 69
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSRFDEQRTATYITELANALSY 127
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
H+ +++RD+KPEN+++ NG + + DF S
Sbjct: 128 CHSKRVIHRDIKPENLLLGSNGELKIADFGWSV 160
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 78/164 (47%), Gaps = 27/164 (16%)
Query: 245 VGTEEYVAPEIIEGKGHDFA-------VDWWSLGVVLHEMLYGATPFRGSSRKETFYRI- 296
VGT +Y++PEI++ G DWW+LGV +EM YG TPF S ET+ +I
Sbjct: 224 VGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIV 283
Query: 297 -----LCRPPDLVGEPTPLRNLIRRLLEKDPTK--RIGVEEIKGHEFFKGVNWELLLKIS 349
L P G P R+ I+RLL T+ R G + + H FF G++W+ L+ S
Sbjct: 284 HYKEHLSLPLVDEGVPEEARDFIQRLLCPPETRLGRGGAGDFRTHPFFFGLDWD-GLRDS 342
Query: 350 RPPNIPARFEHENNESDGRGRDGTKEID-VEKFVQGIFAGGGDA 392
PP P D G T D VE + + +GGG+
Sbjct: 343 VPPFTP----------DFEGATDTCNFDLVEDGLTAMVSGGGET 376
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 18/167 (10%)
Query: 14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVI--WRDLIEKKSKELTNNDNGDKYR 71
DF L+++ GRGA V +VK ++ + +A+K++ W D++++
Sbjct: 62 DFEILKVI---GRGAFSEVAVVKMKQTGQVYAMKIMNKW-DMLKRGEVSCFRE------- 110
Query: 72 RISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIR 131
E+ VL N + + +L + ++ ++Y G DL +L + E++ + R
Sbjct: 111 ----ERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERI-PAEMAR 165
Query: 132 FXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
F H +G V+RD+KP+NI++ GHI L DF KL
Sbjct: 166 FYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKL 212
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF ++ +ET+ RI
Sbjct: 192 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 251
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ +P++R + E+ H +
Sbjct: 252 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 288
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 91
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 149
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
H+ +++RD+KPEN+++ G + + DF S
Sbjct: 150 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 182
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF ++ +ET+ RI
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ +P++R + E+ H +
Sbjct: 229 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 265
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 68
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 126
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
H+ +++RD+KPEN+++ G + + DF S
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 159
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 20/180 (11%)
Query: 14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
DFS RI+ GRG G V+ + ++ + +A+K + + I+ K E +
Sbjct: 190 DFSVHRII---GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE-----------TL 235
Query: 74 SFEQRVLRNV----EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDT 129
+ +R++ ++ + P + + T + + +D G DLH Q +FS+
Sbjct: 236 ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG--VFSEAD 293
Query: 130 IRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
+RF HN +VYRDLKP NI++ E+GH+ + D L+ S K P AS T
Sbjct: 294 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT 353
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 73/126 (57%), Gaps = 11/126 (8%)
Query: 245 VGTEEYVAPEIIE-GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK---ETFYRILCRP 300
VGT Y+APE+++ G +D + DW+SLG +L ++L G +PFR K E L
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 301 PDLVGEPTP-LRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNWELL-LKISRPPN 353
+L +P LR+L+ LL++D +R+ G +E+K FF+ ++W+++ L+ PP
Sbjct: 411 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPL 470
Query: 354 IPARFE 359
IP R E
Sbjct: 471 IPPRGE 476
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF ++ +ET+ RI
Sbjct: 167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 226
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ +P++R + E+ H +
Sbjct: 227 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 263
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 66
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 124
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
H+ +++RD+KPEN+++ G + + DF S
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 157
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 20/180 (11%)
Query: 14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
DFS RI+ GRG G V+ + ++ + +A+K + + I+ K E +
Sbjct: 189 DFSVHRII---GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE-----------TL 234
Query: 74 SFEQRVLRNV----EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDT 129
+ +R++ ++ + P + + T + + +D G DLH Q +FS+
Sbjct: 235 ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG--VFSEAD 292
Query: 130 IRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
+RF HN +VYRDLKP NI++ E+GH+ + D L+ S K P AS T
Sbjct: 293 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT 352
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 73/126 (57%), Gaps = 11/126 (8%)
Query: 245 VGTEEYVAPEIIE-GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK---ETFYRILCRP 300
VGT Y+APE+++ G +D + DW+SLG +L ++L G +PFR K E L
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 409
Query: 301 PDLVGEPTP-LRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNWELL-LKISRPPN 353
+L +P LR+L+ LL++D +R+ G +E+K FF+ ++W+++ L+ PP
Sbjct: 410 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPL 469
Query: 354 IPARFE 359
IP R E
Sbjct: 470 IPPRGE 475
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF ++ +ET+ RI
Sbjct: 167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 226
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ +P++R + E+ H +
Sbjct: 227 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 263
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 66
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 124
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
H+ +++RD+KPEN+++ G + + DF S
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 157
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF ++ +ET+ RI
Sbjct: 168 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 227
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ +P++R + E+ H +
Sbjct: 228 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 264
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 67
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 125
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
H+ +++RD+KPEN+++ G + + +F S
Sbjct: 126 CHSKRVIHRDIKPENLLLGSAGELKIANFGWSV 158
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF ++ +ET+ RI
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 230
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ +P++R + E+ H +
Sbjct: 231 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 267
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 70
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 128
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
H+ +++RD+KPEN+++ G + + DF S
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 161
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF ++ +ET+ RI
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ +P++R + E+ H +
Sbjct: 226 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 262
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 65
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
H+ +++RD+KPEN+++ G + + DF S
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 156
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF ++ +ET+ RI
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 230
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ +P++R + E+ H +
Sbjct: 231 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 267
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 70
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 128
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
H+ +++RD+KPEN+++ G + + DF S
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 161
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF ++ +ET+ RI
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ +P++R + E+ H +
Sbjct: 226 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 262
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 65
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
H+ +++RD+KPEN+++ G + + DF S
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 156
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF ++ +ET+ RI
Sbjct: 168 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 227
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ +P++R + E+ H +
Sbjct: 228 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 264
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 67
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 125
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
H+ +++RD+KPEN+++ G + + DF S
Sbjct: 126 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 158
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF ++ +ET+ RI
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 230
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ +P++R + E+ H +
Sbjct: 231 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 267
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 70
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P +++ ++ Q F +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVY--KELQKLSKFDEQRTATYITELANALSY 128
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
H+ +++RD+KPEN+++ G + + DF S
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 161
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF ++ +ET+ RI
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ +P++R + E+ H +
Sbjct: 226 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 262
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 65
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
H+ +++RD+KPEN+++ G + + DF S
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 156
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF ++ +ET+ RI
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ +P++R + E+ H +
Sbjct: 226 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 262
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 65
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
H+ +++RD+KPEN+++ G + + DF S
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 156
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 20/180 (11%)
Query: 14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
DFS RI+ GRG G V+ + ++ + +A+K + + I+ K E +
Sbjct: 190 DFSVHRII---GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE-----------TL 235
Query: 74 SFEQRVLRNV----EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDT 129
+ +R++ ++ + P + + T + + +D G DLH Q +FS+
Sbjct: 236 ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG--VFSEAD 293
Query: 130 IRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
+RF HN +VYRDLKP NI++ E+GH+ + D L+ S K P AS T
Sbjct: 294 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT 353
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 25/205 (12%)
Query: 245 VGTEEYVAPEIIE-GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK---ETFYRILCRP 300
VGT Y+APE+++ G +D + DW+SLG +L ++L G +PFR K E L
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 301 PDLVGEPTP-LRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNWELL-LKISRPPN 353
+L +P LR+L+ LL++D +R+ G +E+K FF+ ++W+++ L+ PP
Sbjct: 411 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPL 470
Query: 354 IPARFEHENNES------DGRGRDGTKEIDVEKFVQGIFAGGGDAEQKNEV--------N 399
IP R E ++ D G K +D ++ + F + EV N
Sbjct: 471 IPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQELYRNFPLTISERWQQEVAETVFDTIN 530
Query: 400 DEMNKNRGGEKVNNQRHACEEDNFL 424
E ++ +K N++ EED L
Sbjct: 531 AETDRLEARKKTKNKQLGHEEDYAL 555
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 20/180 (11%)
Query: 14 DFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRI 73
DFS RI+ GRG G V+ + ++ + +A+K + + I+ K E +
Sbjct: 190 DFSVHRII---GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE-----------TL 235
Query: 74 SFEQRVLRNV----EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDT 129
+ +R++ ++ + P + + T + + +D G DLH Q +FS+
Sbjct: 236 ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG--VFSEAD 293
Query: 130 IRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
+RF HN +VYRDLKP NI++ E+GH+ + D L+ S K P AS T
Sbjct: 294 MRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT 353
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 25/205 (12%)
Query: 245 VGTEEYVAPEIIE-GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK---ETFYRILCRP 300
VGT Y+APE+++ G +D + DW+SLG +L ++L G +PFR K E L
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 301 PDLVGEPTP-LRNLIRRLLEKDPTKRI-----GVEEIKGHEFFKGVNWELL-LKISRPPN 353
+L +P LR+L+ LL++D +R+ G +E+K FF+ ++W+++ L+ PP
Sbjct: 411 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPL 470
Query: 354 IPARFEHENNES------DGRGRDGTKEIDVEKFVQGIFAGGGDAEQKNEV--------N 399
IP R E ++ D G K +D ++ + F + EV N
Sbjct: 471 IPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQELYRNFPLTISERWQQEVAETVFDTIN 530
Query: 400 DEMNKNRGGEKVNNQRHACEEDNFL 424
E ++ +K N++ EED L
Sbjct: 531 AETDRLEARKKTKNKQLGHEEDYAL 555
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF ++ +ET+ RI
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ +P++R + E+ H +
Sbjct: 229 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 265
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 68
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 126
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQAS 186
H+ +++RD+KPEN+++ G + + DF S +P + +A+
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRAA 168
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF ++ +ET+ RI
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ +P++R + E+ H +
Sbjct: 229 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 265
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 68
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 126
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
H+ +++RD+KPEN+++ G + + +F S
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIANFGWSV 159
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPD 302
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF ++ +ET+ RI PD
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 232
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
V E R+LI RLL+ +P++R + E+ H +
Sbjct: 233 FVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 267
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 70
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P +++ ++ Q F +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVY--KELQKLSKFDEQRTATYITELANALSY 128
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
H+ +++RD+KPEN+++ G + + DF S
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 161
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF ++ +ET+ RI
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ +P++R + E+ H +
Sbjct: 226 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 262
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 65
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQAS 186
H+ +++RD+KPEN+++ G + + DF S +P + +A+
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRAA 165
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF ++ +ET+ RI
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ +P++R + E+ H +
Sbjct: 229 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 265
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 68
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 126
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
H+ +++RD+KPEN+++ G + + DF S
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 159
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF ++ +ET+ RI
Sbjct: 165 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 224
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ +P++R + E+ H +
Sbjct: 225 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 261
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 64
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 122
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
H+ +++RD+KPEN+++ G + + DF S
Sbjct: 123 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 155
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF ++ +ET+ RI
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ +P++R + E+ H +
Sbjct: 229 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 265
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 68
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 126
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
H+ +++RD+KPEN+++ G + + DF S
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 159
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF ++ +ET+ RI
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 229
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ +P++R + E+ H +
Sbjct: 230 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 266
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 69
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 127
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
H+ +++RD+KPEN+++ G + + DF S
Sbjct: 128 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 160
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE IEG+ HD VD WSLGV+ +E L G PF ++ +ET+ RI
Sbjct: 171 LCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 230
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ +P++R + E+ H +
Sbjct: 231 PDFVTEGA--RDLISRLLKHNPSQRPXLREVLEHPWITA 267
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 70
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 128
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
H+ +++RD+KPEN+++ G + + DF S
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 161
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF ++ +ET+ RI
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 228
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ +P++R + E+ H +
Sbjct: 229 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 265
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 68
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 126
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
H+ +++RD+KPEN+++ G + + DF S
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 159
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF ++ +ET+ RI
Sbjct: 163 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 222
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ +P++R + E+ H +
Sbjct: 223 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 259
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ + ALKV+++ +EK E + RR E + ++
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 62
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 120
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
H+ +++RD+KPEN+++ G + + DF S
Sbjct: 121 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 153
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF ++ +ET+ RI
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ +P++R + E+ H +
Sbjct: 226 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 262
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 65
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
H+ +++RD+KPEN+++ G + + DF S
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 156
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF ++ +ET+ RI
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF 225
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ +P++R + E+ H +
Sbjct: 226 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 262
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ +EK E + RR E + ++
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 65
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
H+ +++RD+KPEN+++ G + + DF S
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 156
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 11/122 (9%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK---ETFYRILCRPP 301
VGT Y+APE+++ + + F+ DWW+LG +L+EM+ G +PF+ +K E R++ P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
Query: 302 DLVGE--PTPLRNLIRRLLEKDPTKRIGV-----EEIKGHEFFKGVNWELL-LKISRPPN 353
+ E R+L +LL KDP +R+G E+K H FK +N++ L + PP
Sbjct: 406 EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPF 465
Query: 354 IP 355
P
Sbjct: 466 KP 467
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 42/103 (40%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E+++L V + L T + + G DL + F + F
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
H IVYRDLKPENI++ ++GHI + D L+ +
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHV 336
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 11/122 (9%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK---ETFYRILCRPP 301
VGT Y+APE+++ + + F+ DWW+LG +L+EM+ G +PF+ +K E R++ P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
Query: 302 DLVGE--PTPLRNLIRRLLEKDPTKRIGV-----EEIKGHEFFKGVNWELL-LKISRPPN 353
+ E R+L +LL KDP +R+G E+K H FK +N++ L + PP
Sbjct: 406 EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPF 465
Query: 354 IP 355
P
Sbjct: 466 KP 467
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 42/103 (40%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E+++L V + L T + + G DL + F + F
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
H IVYRDLKPENI++ ++GHI + D L+ +
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHV 336
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 120/317 (37%), Gaps = 71/317 (22%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
+G G V L + + E A+K+ + N G RI E L+N
Sbjct: 17 TIGTGGFAKVKLACHILTGEMVAIKI------------MDKNTLGSDLPRIKTEIEALKN 64
Query: 83 VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+ H + +L VL T + ++YCPG +L Q S++ R
Sbjct: 65 LRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR--LSEEETRVVFRQIVSAVA 122
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H+ G +RDLKPEN++ E + L+DF L K PK
Sbjct: 123 YVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAK--PKG-------------------N 161
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGH- 261
+ + + C ++ P E+I+GK +
Sbjct: 162 KDYHLQTCCGSLAYAAP----------------------------------ELIQGKSYL 187
Query: 262 DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRN-LIRRLLEK 320
D WS+G++L+ ++ G PF + + +I+ D+ +P L++++L+
Sbjct: 188 GSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQV 247
Query: 321 DPTKRIGVEEIKGHEFF 337
DP KRI ++ + H +
Sbjct: 248 DPKKRISMKNLLNHPWI 264
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ H+ VD W +GV+ +E+L G PF +S ET+ RI+ +
Sbjct: 181 MCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKF 240
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
P V PT ++LI +LL +P++R+ + ++ H + +
Sbjct: 241 PASV--PTGAQDLISKLLRHNPSERLPLAQVSAHPWVRA 277
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ +S ALKV+++ IEK+ E + RR E + ++
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVE-------HQLRR---EIEIQAHL 80
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL + + ++Y P +L+ ++ Q F +
Sbjct: 81 HHPNILRLYNYFYDRRRIYLILEYAPRGELY--KELQKSCTFDEQRTATIMEELADALMY 138
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
H +++RD+KPEN+++ G + + DF S
Sbjct: 139 CHGKKVIHRDIKPENLLLGLKGELKIADFGWSV 171
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 131/317 (41%), Gaps = 76/317 (23%)
Query: 19 RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
R++ +G+G V L + + + + A+K+I + + N +++ E R
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-----------NSSSLQKLFREVR 65
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
+++ + HP + +L V+ T+K + ++Y G ++ + +F
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
H IV+RDLK EN +L+D D++ K++ G
Sbjct: 126 VQYC--HQKFIVHRDLKAEN---------LLLDADMNIKIAD----------------FG 158
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
+F +K + F G+ Y APE+ +G
Sbjct: 159 FSNEFTFGNKLDT--------------------------------FCGSPPYAAPELFQG 186
Query: 259 KGHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTPLRNLI 314
K +D VD WSLGV+L+ ++ G+ PF G + KE R+L R P + T NL+
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS--TDCENLL 244
Query: 315 RRLLEKDPTKRIGVEEI 331
++ L +P+KR +E+I
Sbjct: 245 KKFLILNPSKRGTLEQI 261
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 131/317 (41%), Gaps = 76/317 (23%)
Query: 19 RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
R++ +G+G V L + + + + A+K+I + + N +++ E R
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-----------NSSSLQKLFREVR 65
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
+++ + HP + +L V+ T+K + ++Y G ++ + +F
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
H IV+RDLK EN +L+D D++ K++ G
Sbjct: 126 VQYC--HQKFIVHRDLKAEN---------LLLDADMNIKIAD----------------FG 158
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
+F +K + F G+ Y APE+ +G
Sbjct: 159 FSNEFTFGNKLDT--------------------------------FCGSPPYAAPELFQG 186
Query: 259 KGHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTPLRNLI 314
K +D VD WSLGV+L+ ++ G+ PF G + KE R+L R P + T NL+
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS--TDCENLL 244
Query: 315 RRLLEKDPTKRIGVEEI 331
++ L +P+KR +E+I
Sbjct: 245 KKFLILNPSKRGTLEQI 261
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEG+ HD VD WSLGV+ +E L G PF ++ ++T+ RI
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTF 225
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
PD V E R+LI RLL+ +P++R + E+ H +
Sbjct: 226 PDFVTEGA--RDLISRLLKHNPSQRPMLREVLEHPWITA 262
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 13/163 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G G V+L ++ S ALKV+++ +EK E + RR E + ++
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVE-------HQLRR---EVEIQSHL 65
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + RL G V ++Y P ++ R+ Q F +
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVY--RELQKLSKFDEQRTATYITELANALSY 123
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQAS 186
H+ +++RD+KPEN+++ G + + DF S +P + +A+
Sbjct: 124 CHSKKVIHRDIKPENLLLGSAGELKIADFGWSVH-APSSRRAA 165
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 130/317 (41%), Gaps = 76/317 (23%)
Query: 19 RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
R++ +G+G V L + + + + A+K+I + + N +++ E R
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-----------NSSSLQKLFREVR 65
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
+++ + HP + +L V+ T+K + ++Y G ++ + +F
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
H IV+RDLK EN +L+D D++ K++ G
Sbjct: 126 VQYC--HQKFIVHRDLKAEN---------LLLDADMNIKIAD----------------FG 158
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
+F +K + F G Y APE+ +G
Sbjct: 159 FSNEFTFGNKLDA--------------------------------FCGAPPYAAPELFQG 186
Query: 259 KGHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTPLRNLI 314
K +D VD WSLGV+L+ ++ G+ PF G + KE R+L R P + T NL+
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS--TDCENLL 244
Query: 315 RRLLEKDPTKRIGVEEI 331
++ L +P+KR +E+I
Sbjct: 245 KKFLILNPSKRGTLEQI 261
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 127/331 (38%), Gaps = 79/331 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
IV LG GA G V+ K+ E+ A KVI E KS+E + E +
Sbjct: 15 IVGELGDGAFGKVYKAKNKETGALAAAKVI-----ETKSEE--------ELEDYIVEIEI 61
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L +HP + +L G D + I++CPG + ++ + ++ ++ I+
Sbjct: 62 LATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIM-LELDRGLTEPQIQVVCRQMLE 120
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H+ I++RDLK N+++ G I L DF +S K N ++ +
Sbjct: 121 ALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAK----------------NLKT-L 163
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEII--- 256
+KR S F+GT ++APE++
Sbjct: 164 QKRDS---------------------------------------FIGTPYWMAPEVVMCE 184
Query: 257 --EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP----L 310
+ +D+ D WSLG+ L EM P + +I P + P+
Sbjct: 185 TMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEF 244
Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
R+ ++ L+K+P R ++ H F +
Sbjct: 245 RDFLKIALDKNPETRPSAAQLLEHPFVSSIT 275
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 127/317 (40%), Gaps = 76/317 (23%)
Query: 19 RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
R++ +G+G V L + + + A+K+I + + N +++ E R
Sbjct: 15 RLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-----------NPTSLQKLFREVR 63
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
+++ + HP + +L V+ T+K + ++Y G ++ + R
Sbjct: 64 IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQIV 121
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
H IV+RDLK EN +L+D D++ K++
Sbjct: 122 SAVQYCHQKRIVHRDLKAEN---------LLLDADMNIKIAD------------------ 154
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
F ++F G F G+ Y APE+ +G
Sbjct: 155 ----FGFSNEFTVGG--------------------------KLDTFCGSPPYAAPELFQG 184
Query: 259 KGHDF-AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTPLRNLI 314
K +D VD WSLGV+L+ ++ G+ PF G + KE R+L R P + T NL+
Sbjct: 185 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS--TDCENLL 242
Query: 315 RRLLEKDPTKRIGVEEI 331
+R L +P KR +E+I
Sbjct: 243 KRFLVLNPIKRGTLEQI 259
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 129/328 (39%), Gaps = 83/328 (25%)
Query: 19 RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
R++ +G+G V L + + + A+K+I + + N +++ E R
Sbjct: 18 RLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-----------NPTSLQKLFREVR 66
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
+++ + HP + +L V+ T+K + ++Y G ++ + R
Sbjct: 67 IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQIV 124
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
H IV+RDLK EN +L+D D++ K++
Sbjct: 125 SAVQYCHQKRIVHRDLKAEN---------LLLDADMNIKIAD------------------ 157
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
F ++F G F G Y APE+ +G
Sbjct: 158 ----FGFSNEFTVGG--------------------------KLDAFCGAPPYAAPELFQG 187
Query: 259 KGHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTPLRNLI 314
K +D VD WSLGV+L+ ++ G+ PF G + KE R+L R P + T NL+
Sbjct: 188 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS--TDCENLL 245
Query: 315 RRLLEKDPTKRIGVEEI-------KGHE 335
+R L +P KR +E+I GHE
Sbjct: 246 KRFLVLNPIKRGTLEQIMKDRWINAGHE 273
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 127/331 (38%), Gaps = 79/331 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
IV LG GA G V+ K+ E+ A KVI E KS+E + E +
Sbjct: 23 IVGELGDGAFGKVYKAKNKETGALAAAKVI-----ETKSEE--------ELEDYIVEIEI 69
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L +HP + +L G D + I++CPG + ++ + ++ ++ I+
Sbjct: 70 LATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIM-LELDRGLTEPQIQVVCRQMLE 128
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H+ I++RDLK N+++ G I L DF +S K N ++ +
Sbjct: 129 ALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAK----------------NLKT-L 171
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEII--- 256
+KR S F+GT ++APE++
Sbjct: 172 QKRDS---------------------------------------FIGTPYWMAPEVVMCE 192
Query: 257 --EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP----L 310
+ +D+ D WSLG+ L EM P + +I P + P+
Sbjct: 193 TMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEF 252
Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
R+ ++ L+K+P R ++ H F +
Sbjct: 253 RDFLKIALDKNPETRPSAAQLLEHPFVSSIT 283
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 131/317 (41%), Gaps = 76/317 (23%)
Query: 19 RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
R++ +G+G V L + + + + A+K+I + + N +++ E R
Sbjct: 10 RLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-----------NSSSLQKLFREVR 58
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
+++ + HP + +L V+ T+K + ++Y G ++ + + R
Sbjct: 59 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHGWMKEKEARAKFRQIV 116
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
H IV+RDLK EN +L+D D++ K++ G
Sbjct: 117 SAVQYCHQKFIVHRDLKAEN---------LLLDADMNIKIAD----------------FG 151
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
+F +K + F G+ Y APE+ +G
Sbjct: 152 FSNEFTFGNKLDT--------------------------------FCGSPPYAAPELFQG 179
Query: 259 KGHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTPLRNLI 314
K +D VD WSLGV+L+ ++ G+ PF G + KE R+L R P + T NL+
Sbjct: 180 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS--TDCENLL 237
Query: 315 RRLLEKDPTKRIGVEEI 331
++ L +P+KR +E+I
Sbjct: 238 KKFLILNPSKRGTLEQI 254
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 131/317 (41%), Gaps = 76/317 (23%)
Query: 19 RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
R++ +G+G V L + + + + A+++I + + N +++ E R
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQL-----------NSSSLQKLFREVR 65
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
+++ + HP + +L V+ T+K + ++Y G ++ + +F
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
H IV+RDLK EN +L+D D++ K++ G
Sbjct: 126 VQYC--HQKFIVHRDLKAEN---------LLLDADMNIKIAD----------------FG 158
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
+F +K + F G+ Y APE+ +G
Sbjct: 159 FSNEFTFGNKLDT--------------------------------FCGSPPYAAPELFQG 186
Query: 259 KGHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTPLRNLI 314
K +D VD WSLGV+L+ ++ G+ PF G + KE R+L R P + T NL+
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMS--TDCENLL 244
Query: 315 RRLLEKDPTKRIGVEEI 331
++ L +P+KR +E+I
Sbjct: 245 KKFLILNPSKRGTLEQI 261
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 123/327 (37%), Gaps = 75/327 (22%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G +V ++ + +A K I K ++ + G I E +LR V
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFI-------KKRQSRASRRGVCREEIEREVSILRQV 72
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + L V V ++ G +L Q+ E + ++ F
Sbjct: 73 LHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYL 131
Query: 144 XHNMGIVYRDLKPENIMIQENG----HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H I + DLKPENIM+ + HI L+DF LA G+
Sbjct: 132 -HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-----------------LAHEIEDGV 173
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
+ + F GT E+VAPEI+ +
Sbjct: 174 EFKNIF----------------------------------------GTPEFVAPEIVNYE 193
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD----LVGEPTPL-RNLI 314
D WS+GV+ + +L GA+PF G +++ET I D + + L ++ I
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFI 253
Query: 315 RRLLEKDPTKRIGVEEIKGHEFFKGVN 341
R+LL K+ KR+ ++E H + V+
Sbjct: 254 RKLLVKETRKRLTIQEALRHPWITPVD 280
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 123/321 (38%), Gaps = 77/321 (23%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G+GA VV + + +A K+I +K+L+ D ++++ E R+ R +
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKII-------NTKKLSARD----HQKLEREARICRLL 60
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+H + RL +S + F D G +L + + +S+
Sbjct: 61 KHSNIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIQQILEAVLH 118
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H MG+V+RDLKPEN++ LA+ + K
Sbjct: 119 CHQMGVVHRDLKPENLL------------------------------LASKCKGAAVKLA 148
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
F G+++E F GT Y++PE++ + +
Sbjct: 149 DF-------GLAIE----------------VQGDQQAWFGFAGTPGYLSPEVLRKEAYGK 185
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP--------LRNLIR 315
VD W+ GV+L+ +L G PF + + + +I D P+P +NLI
Sbjct: 186 PVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDF---PSPEWDTVTPEAKNLIN 242
Query: 316 RLLEKDPTKRIGVEEIKGHEF 336
++L +P KRI E H +
Sbjct: 243 QMLTINPAKRITAHEALKHPW 263
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 125/327 (38%), Gaps = 77/327 (23%)
Query: 19 RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
++ LG+GA VV + + + +A K+I +K+L+ D ++++ E R
Sbjct: 7 QLFEELGKGAFSVVRRCMKIPTGQEYAAKII-------NTKKLSARD----HQKLEREAR 55
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
+ R ++HP + RL +S + F D G +L + + +S+
Sbjct: 56 ICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIQQIL 113
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
H GIV+RDLKPEN++ LA+ ++
Sbjct: 114 ESVNHCHLNGIVHRDLKPENLL------------------------------LASKSKGA 143
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
K F G+++E F GT Y++PE++
Sbjct: 144 AVKLADF-------GLAIE----------------VQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP--------L 310
+ VD W+ GV+L+ +L G PF + + +I D P+P
Sbjct: 181 DPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF---PSPEWDTVTPEA 237
Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEFF 337
++LI ++L +P KRI E H +
Sbjct: 238 KDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 125/327 (38%), Gaps = 77/327 (23%)
Query: 19 RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
++ LG+GA VV + + + +A K+I +K+L+ D ++++ E R
Sbjct: 7 QLFEELGKGAFSVVRRCMKIPTGQEYAAKII-------NTKKLSARD----HQKLEREAR 55
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
+ R ++HP + RL +S + F D G +L + + +S+
Sbjct: 56 ICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIQQIL 113
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
H GIV+RDLKPEN++ LA+ ++
Sbjct: 114 ESVNHCHLNGIVHRDLKPENLL------------------------------LASKSKGA 143
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
K F G+++E F GT Y++PE++
Sbjct: 144 AVKLADF-------GLAIE----------------VQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP--------L 310
+ VD W+ GV+L+ +L G PF + + +I D P+P
Sbjct: 181 DPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF---PSPEWDTVTPEA 237
Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEFF 337
++LI ++L +P KRI E H +
Sbjct: 238 KDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 126/330 (38%), Gaps = 77/330 (23%)
Query: 16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISF 75
S ++ LG+GA VV V + + +A K+I +K+L+ D ++++
Sbjct: 22 SMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKII-------NTKKLSARD----HQKLER 70
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E R+ R ++HP + RL +S + D G +L + + +S+
Sbjct: 71 EARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL--FEDIVAREYYSEADASHCIQ 128
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
H MG+V+RDLKPEN+ +LA+
Sbjct: 129 QILEAVLHCHQMGVVHRDLKPENL------------------------------LLASKL 158
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
+ K F G+++E F GT Y++PE+
Sbjct: 159 KGAAVKLADF-------GLAIE----------------VEGEQQAWFGFAGTPGYLSPEV 195
Query: 256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP------ 309
+ + VD W+ GV+L+ +L G PF + + +I D P+P
Sbjct: 196 LRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF---PSPEWDTVT 252
Query: 310 --LRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
++LI ++L +P+KRI E H +
Sbjct: 253 PEAKDLINKMLTINPSKRITAAEALKHPWI 282
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 129/326 (39%), Gaps = 79/326 (24%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
I+ LG GA G V+ ++ E+S A KVI + KS+E + E +
Sbjct: 41 IIGELGDGAFGKVYKAQNKETSVLAAAKVI-----DTKSEE--------ELEDYMVEIDI 87
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L + +HP + +L + + I++C G + ++ + E+ ++ I+
Sbjct: 88 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM-LELERPLTESQIQVVCKQTLD 146
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H+ I++RDLK NI+ +G I L DF +S K NTR+ I
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK----------------NTRT-I 189
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEII--- 256
++R S F+GT ++APE++
Sbjct: 190 QRRDS---------------------------------------FIGTPYWMAPEVVMCE 210
Query: 257 --EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP----TPL 310
+ + +D+ D WSLG+ L EM P + +I P + +P +
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNF 270
Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEF 336
++ +++ LEK+ R ++ H F
Sbjct: 271 KDFLKKCLEKNVDARWTTSQLLQHPF 296
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 124/320 (38%), Gaps = 78/320 (24%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G+GA G V+ DV + + A++ + +L ++ KEL N E V+R
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQM--NLQQQPKKELIIN-----------EILVMREN 74
Query: 84 EHP-LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
++P ++ L L D+ ++Y G SL +E + I
Sbjct: 75 KNPNIVNYLDSYLVGDEL-WVVMEYLAG---GSLTDVVTETCMDEGQIAAVCRECLQALE 130
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H+ +++RD+K +NI++ +G + L DF ++ TP+ S ++ +
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI---TPEQSKRSXM----------- 176
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
VGT ++APE++ K +
Sbjct: 177 ------------------------------------------VGTPYWMAPEVVTRKAYG 194
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL----RNLIRRLL 318
VD WSLG++ EM+ G P+ + Y I + P L R+ + R L
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 254
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
E D KR +E+ H+F K
Sbjct: 255 EMDVEKRGSAKELLQHQFLK 274
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 130/333 (39%), Gaps = 81/333 (24%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
IV LG+G+ G V KD + + +A+KVI K S + N D R + +
Sbjct: 26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVI-----NKASAK--NKDTSTILREV----EL 74
Query: 80 LRNVEHPLLPRLRGVLS-TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
L+ ++HP + +L +L + F Y G + K++ FS+
Sbjct: 75 LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVF 131
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQ---ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
H IV+RDLKPENI+++ ++ I ++DF LS T NT
Sbjct: 132 SGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS-------------TCFQQNT 178
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
+ +K R +GT Y+APE+
Sbjct: 179 K--MKDR------------------------------------------IGTAYYIAPEV 194
Query: 256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLVGEPTPL 310
+ G +D D WS GV+L+ +L G PF G + + R+ P
Sbjct: 195 LRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDA 253
Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWE 343
++LIR++L P+ RI + H + + + E
Sbjct: 254 KDLIRKMLTFHPSLRITATQCLEHPWIQKYSSE 286
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 124/320 (38%), Gaps = 78/320 (24%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G+GA G V+ DV + + A++ + +L ++ KEL N E V+R
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQM--NLQQQPKKELIIN-----------EILVMREN 75
Query: 84 EHP-LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
++P ++ L L D+ ++Y G SL +E + I
Sbjct: 76 KNPNIVNYLDSYLVGDEL-WVVMEYLAG---GSLTDVVTETCMDEGQIAAVCRECLQALE 131
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H+ +++RD+K +NI++ +G + L DF ++ TP+ S ++ +
Sbjct: 132 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI---TPEQSKRSXM----------- 177
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
VGT ++APE++ K +
Sbjct: 178 ------------------------------------------VGTPYWMAPEVVTRKAYG 195
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL----RNLIRRLL 318
VD WSLG++ EM+ G P+ + Y I + P L R+ + R L
Sbjct: 196 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 255
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
E D KR +E+ H+F K
Sbjct: 256 EMDVEKRGSAKELIQHQFLK 275
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 130/333 (39%), Gaps = 81/333 (24%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
IV LG+G+ G V KD + + +A+KVI K S + N D R E +
Sbjct: 26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVI-----NKASAK--NKDTSTILR----EVEL 74
Query: 80 LRNVEHPLLPRLRGVLS-TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
L+ ++HP + +L +L + F Y G + K++ FS+
Sbjct: 75 LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVF 131
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQ---ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
H IV+RDLKPENI+++ ++ I ++DF LS T NT
Sbjct: 132 SGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS-------------TCFQQNT 178
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
+ +K R +GT Y+APE+
Sbjct: 179 K--MKDR------------------------------------------IGTAYYIAPEV 194
Query: 256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLVGEPTPL 310
+ G +D D WS GV+L+ +L G PF G + + R+ P
Sbjct: 195 LRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDA 253
Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWE 343
++LIR++L P+ RI + H + + + E
Sbjct: 254 KDLIRKMLTFHPSLRITATQCLEHPWIQKYSSE 286
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 128/326 (39%), Gaps = 79/326 (24%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
I+ LG GA G V+ ++ E+S A KVI + KS+E + E +
Sbjct: 41 IIGELGDGAFGKVYKAQNKETSVLAAAKVI-----DTKSEE--------ELEDYMVEIDI 87
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L + +HP + +L + + I++C G + ++ + E+ ++ I+
Sbjct: 88 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM-LELERPLTESQIQVVCKQTLD 146
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H+ I++RDLK NI+ +G I L DF +S K NTR I
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK----------------NTRX-I 189
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEII--- 256
++R S F+GT ++APE++
Sbjct: 190 QRRDS---------------------------------------FIGTPYWMAPEVVMCE 210
Query: 257 --EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP----TPL 310
+ + +D+ D WSLG+ L EM P + +I P + +P +
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNF 270
Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEF 336
++ +++ LEK+ R ++ H F
Sbjct: 271 KDFLKKCLEKNVDARWTTSQLLQHPF 296
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 130/333 (39%), Gaps = 81/333 (24%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
IV LG+G+ G V KD + + +A+KVI K S + N D R E +
Sbjct: 26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVI-----NKASAK--NKDTSTILR----EVEL 74
Query: 80 LRNVEHPLLPRLRGVLS-TDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
L+ ++HP + +L +L + F Y G + K++ FS+
Sbjct: 75 LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVF 131
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQ---ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
H IV+RDLKPENI+++ ++ I ++DF LS T NT
Sbjct: 132 SGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS-------------TCFQQNT 178
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
+ +K R +GT Y+APE+
Sbjct: 179 K--MKDR------------------------------------------IGTAYYIAPEV 194
Query: 256 IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP-----PDLVGEPTPL 310
+ G +D D WS GV+L+ +L G PF G + + R+ P
Sbjct: 195 LRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDA 253
Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWE 343
++LIR++L P+ RI + H + + + E
Sbjct: 254 KDLIRKMLTFHPSLRITATQCLEHPWIQKYSSE 286
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 122/328 (37%), Gaps = 83/328 (25%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+ LG GA VFLVK + + FALK I KKS ++ + E VL
Sbjct: 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCI------KKSPAFRDSS-------LENEIAVL 60
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ ++H + L + + + G +L + ++++
Sbjct: 61 KKIKHENIVTLEDIYESTTHYYLVMQLVSGGEL--FDRILERGVYTEKDASLVIQQVLSA 118
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H GIV+RDLKPEN++ TP+ + K ++ T G+
Sbjct: 119 VKYLHENGIVHRDLKPENLLYL-------------------TPEENSKIMI---TDFGLS 156
Query: 201 K--RRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
K + +S C GT YVAPE++
Sbjct: 157 KMEQNGIMSTAC-----------------------------------GTPGYVAPEVLAQ 181
Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSR-------KETFYRILCRPPDLVGEPTPLR 311
K + AVD WS+GV+ + +L G PF + KE +Y D + E +
Sbjct: 182 KPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESA--K 239
Query: 312 NLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
+ I LLEKDP +R E+ H + G
Sbjct: 240 DFICHLLEKDPNERYTCEKALSHPWIDG 267
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 124/320 (38%), Gaps = 78/320 (24%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G+GA G V+ DV + + A++ + +L ++ KEL N E V+R
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQM--NLQQQPKKELIIN-----------EILVMREN 74
Query: 84 EHP-LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
++P ++ L L D+ ++Y G SL +E + I
Sbjct: 75 KNPNIVNYLDSYLVGDEL-WVVMEYLAG---GSLTDVVTETCMDEGQIAAVCRECLQALE 130
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H+ +++RD+K +NI++ +G + L DF ++ TP+ S ++ +
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI---TPEQSKRSTM----------- 176
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
VGT ++APE++ K +
Sbjct: 177 ------------------------------------------VGTPYWMAPEVVTRKAYG 194
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL----RNLIRRLL 318
VD WSLG++ EM+ G P+ + Y I + P L R+ + R L
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 254
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
+ D KR +E+ H+F K
Sbjct: 255 DMDVEKRGSAKELLQHQFLK 274
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 126/320 (39%), Gaps = 67/320 (20%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G VV ++ + +A K I K + ++ G I E +L+ +
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFI-------KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+HP + L V V ++ G +L ++ E + ++ F
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYL 130
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H++ I + DLKPENI ML+D ++ P+ K + G+ +
Sbjct: 131 -HSLQIAHFDLKPENI--------MLLDRNV--------PKPRIKII-----DFGLAHKI 168
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
F ++F + GT E+VAPEI+ +
Sbjct: 169 DFGNEFKN--------------------------------IFGTPEFVAPEIVNYEPLGL 196
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLIRRLL 318
D WS+GV+ + +L GA+PF G +++ET + + E ++ IRRLL
Sbjct: 197 EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLL 256
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
KDP KR+ +++ H + K
Sbjct: 257 VKDPKKRMTIQDSLQHPWIK 276
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 124/320 (38%), Gaps = 78/320 (24%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G+GA G V+ DV + + A++ + +L ++ KEL N E V+R
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQM--NLQQQPKKELIIN-----------EILVMREN 75
Query: 84 EHP-LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
++P ++ L L D+ ++Y G SL +E + I
Sbjct: 76 KNPNIVNYLDSYLVGDEL-WVVMEYLAG---GSLTDVVTETCMDEGQIAAVCRECLQALE 131
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H+ +++R++K +NI++ +G + L DF ++ TP+ S ++ +
Sbjct: 132 FLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQI---TPEQSKRSTM----------- 177
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
VGT ++APE++ K +
Sbjct: 178 ------------------------------------------VGTPYWMAPEVVTRKAYG 195
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL----RNLIRRLL 318
VD WSLG++ EM+ G P+ + Y I + P L R+ + R L
Sbjct: 196 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 255
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
E D KR +E+ H+F K
Sbjct: 256 EMDVEKRGSAKELIQHQFLK 275
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 122/327 (37%), Gaps = 75/327 (22%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G +V ++ + +A K I K ++ + G I E +LR V
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFI-------KKRQSRASRRGVSREEIEREVSILRQV 72
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
H + L V V ++ G +L Q+ E + ++ F
Sbjct: 73 LHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYL 131
Query: 144 XHNMGIVYRDLKPENIMIQENG----HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H I + DLKPENIM+ + HI L+DF LA G+
Sbjct: 132 -HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-----------------LAHEIEDGV 173
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
+ + F GT E+VAPEI+ +
Sbjct: 174 EFKNIF----------------------------------------GTPEFVAPEIVNYE 193
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD----LVGEPTPL-RNLI 314
D WS+GV+ + +L GA+PF G +++ET I D + + L ++ I
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFI 253
Query: 315 RRLLEKDPTKRIGVEEIKGHEFFKGVN 341
R+LL K+ KR+ ++E H + V+
Sbjct: 254 RKLLVKETRKRLTIQEALRHPWITPVD 280
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 124/320 (38%), Gaps = 78/320 (24%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G+GA G V+ DV + + A++ + +L ++ KEL N E V+R
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQM--NLQQQPKKELIIN-----------EILVMREN 74
Query: 84 EHP-LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
++P ++ L L D+ ++Y G SL +E + I
Sbjct: 75 KNPNIVNYLDSYLVGDEL-WVVMEYLAG---GSLTDVVTETCMDEGQIAAVCRECLQALE 130
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H+ +++RD+K +NI++ +G + L DF ++ TP+ S +
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI---TPEQS---------------K 172
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
RS VGT ++APE++ K +
Sbjct: 173 RS--------------------------------------EMVGTPYWMAPEVVTRKAYG 194
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPL----RNLIRRLL 318
VD WSLG++ EM+ G P+ + Y I + P L R+ + R L
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL 254
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
+ D KR +E+ H+F K
Sbjct: 255 DMDVEKRGSAKELLQHQFLK 274
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 126/317 (39%), Gaps = 76/317 (23%)
Query: 19 RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
R++ +G+G V L + + + + A+K+I + + N +++ E R
Sbjct: 17 RLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-----------NSSSLQKLFREVR 65
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
+ + + HP + +L V+ T+K + +Y G ++ + +F
Sbjct: 66 IXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSA 125
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
H IV+RDLK EN +L+D D + K++ G
Sbjct: 126 VQYC--HQKFIVHRDLKAEN---------LLLDADXNIKIAD----------------FG 158
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
+F +K + F G Y APE+ +G
Sbjct: 159 FSNEFTFGNKLDA--------------------------------FCGAPPYAAPELFQG 186
Query: 259 KGHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDLVGEPTPLRNLI 314
K +D VD WSLGV+L+ ++ G+ PF G + KE R+L R P T NL+
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP--FYXSTDCENLL 244
Query: 315 RRLLEKDPTKRIGVEEI 331
++ L +P+KR +E+I
Sbjct: 245 KKFLILNPSKRGTLEQI 261
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 122/327 (37%), Gaps = 75/327 (22%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G +V ++ + +A K I K ++ + G I E +LR V
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFI-------KKRQSRASRRGVSREEIEREVSILRQV 72
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
H + L V V ++ G +L Q+ E + ++ F
Sbjct: 73 LHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYL 131
Query: 144 XHNMGIVYRDLKPENIMIQENG----HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H I + DLKPENIM+ + HI L+DF LA G+
Sbjct: 132 -HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-----------------LAHEIEDGV 173
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
+ + F GT E+VAPEI+ +
Sbjct: 174 EFKNIF----------------------------------------GTPEFVAPEIVNYE 193
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD----LVGEPTPL-RNLI 314
D WS+GV+ + +L GA+PF G +++ET I D + + L ++ I
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFI 253
Query: 315 RRLLEKDPTKRIGVEEIKGHEFFKGVN 341
R+LL K+ KR+ ++E H + V+
Sbjct: 254 RKLLVKETRKRLTIQEALRHPWITPVD 280
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 126/320 (39%), Gaps = 67/320 (20%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G VV ++ + +A K I K + ++ G I E +L+ +
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFI-------KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+HP + L V V ++ G +L ++ E + ++ F
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYL 130
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H++ I + DLKPENI ML+D ++ P+ K + G+ +
Sbjct: 131 -HSLQIAHFDLKPENI--------MLLDRNV--------PKPRIKII-----DFGLAHKI 168
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
F ++F + GT E+VAPEI+ +
Sbjct: 169 DFGNEFKN--------------------------------IFGTPEFVAPEIVNYEPLGL 196
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLIRRLL 318
D WS+GV+ + +L GA+PF G +++ET + + E ++ IRRLL
Sbjct: 197 EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLL 256
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
KDP KR+ +++ H + K
Sbjct: 257 VKDPKKRMTIQDSLQHPWIK 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 126/320 (39%), Gaps = 67/320 (20%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G VV ++ + +A K I K + ++ G I E +L+ +
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFI-------KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+HP + L V V ++ G +L ++ E + ++ F
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYL 130
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H++ I + DLKPENI ML+D ++ P+ K + G+ +
Sbjct: 131 -HSLQIAHFDLKPENI--------MLLDRNV--------PKPRIKII-----DFGLAHKI 168
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
F ++F + GT E+VAPEI+ +
Sbjct: 169 DFGNEFKN--------------------------------IFGTPEFVAPEIVNYEPLGL 196
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLIRRLL 318
D WS+GV+ + +L GA+PF G +++ET + + E ++ IRRLL
Sbjct: 197 EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLL 256
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
KDP KR+ +++ H + K
Sbjct: 257 VKDPKKRMTIQDSLQHPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 125/320 (39%), Gaps = 67/320 (20%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G VV ++ + +A K I K + ++ G I E +L+ +
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFI-------KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+HP + L V V ++ G +L ++ E + ++ F
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYL 130
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H++ I + DLKPENI ML+D ++ P+ K + G+ +
Sbjct: 131 -HSLQIAHFDLKPENI--------MLLDRNV--------PKPRIKII-----DFGLAHKI 168
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
F ++F GT E+VAPEI+ +
Sbjct: 169 DFGNEF--------------------------------KNIFGTPEFVAPEIVNYEPLGL 196
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLIRRLL 318
D WS+GV+ + +L GA+PF G +++ET + + E ++ IRRLL
Sbjct: 197 EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLL 256
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
KDP KR+ +++ H + K
Sbjct: 257 VKDPKKRMTIQDSLQHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 126/320 (39%), Gaps = 67/320 (20%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G VV ++ + +A K I K + ++ G I E +L+ +
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFI-------KKRRTKSSRRGVSREDIEREVSILKEI 70
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+HP + L V V ++ G +L ++ E + ++ F
Sbjct: 71 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYL 129
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H++ I + DLKPENI ML+D ++ P+ K + G+ +
Sbjct: 130 -HSLQIAHFDLKPENI--------MLLDRNV--------PKPRIKII-----DFGLAHKI 167
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
F ++F + GT E+VAPEI+ +
Sbjct: 168 DFGNEFKN--------------------------------IFGTPEFVAPEIVNYEPLGL 195
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLIRRLL 318
D WS+GV+ + +L GA+PF G +++ET + + E ++ IRRLL
Sbjct: 196 EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLL 255
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
KDP KR+ +++ H + K
Sbjct: 256 VKDPKKRMTIQDSLQHPWIK 275
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 126/320 (39%), Gaps = 67/320 (20%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G VV ++ + +A K I K + ++ G I E +L+ +
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFI-------KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+HP + L V V ++ G +L ++ E + ++ F
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYL 130
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H++ I + DLKPENI ML+D ++ P+ K + G+ +
Sbjct: 131 -HSLQIAHFDLKPENI--------MLLDRNV--------PKPRIKII-----DFGLAHKI 168
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
F ++F + GT E+VAPEI+ +
Sbjct: 169 DFGNEFKN--------------------------------IFGTPEFVAPEIVNYEPLGL 196
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLIRRLL 318
D WS+GV+ + +L GA+PF G +++ET + + E ++ IRRLL
Sbjct: 197 EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLL 256
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
KDP KR+ +++ H + K
Sbjct: 257 VKDPKKRMTIQDSLQHPWIK 276
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 126/320 (39%), Gaps = 67/320 (20%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G VV ++ + +A K I K + ++ G I E +L+ +
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFI-------KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+HP + L V V ++ G +L ++ E + ++ F
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYL 130
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H++ I + DLKPENI ML+D ++ P+ K + G+ +
Sbjct: 131 -HSLQIAHFDLKPENI--------MLLDRNV--------PKPRIKII-----DFGLAHKI 168
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
F ++F + GT E+VAPEI+ +
Sbjct: 169 DFGNEFKN--------------------------------IFGTPEFVAPEIVNYEPLGL 196
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLIRRLL 318
D WS+GV+ + +L GA+PF G +++ET + + E ++ IRRLL
Sbjct: 197 EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLL 256
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
KDP KR+ +++ H + K
Sbjct: 257 VKDPKKRMTIQDSLQHPWIK 276
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 127/326 (38%), Gaps = 79/326 (24%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
I+ LG GA G V+ ++ E+S A KVI + KS+E + E +
Sbjct: 41 IIGELGDGAFGKVYKAQNKETSVLAAAKVI-----DTKSEE--------ELEDYMVEIDI 87
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L + +HP + +L + + I++C G + ++ + E+ ++ I+
Sbjct: 88 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM-LELERPLTESQIQVVCKQTLD 146
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H+ I++RDLK NI+ +G I L DF +S K NTR I
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK----------------NTRX-I 189
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEII--- 256
++R F+GT ++APE++
Sbjct: 190 QRRDX---------------------------------------FIGTPYWMAPEVVMCE 210
Query: 257 --EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP----TPL 310
+ + +D+ D WSLG+ L EM P + +I P + +P +
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNF 270
Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEF 336
++ +++ LEK+ R ++ H F
Sbjct: 271 KDFLKKCLEKNVDARWTTSQLLQHPF 296
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 126/320 (39%), Gaps = 67/320 (20%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G VV ++ + +A K I K + ++ G I E +L+ +
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFI-------KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+HP + L V V ++ G +L ++ E + ++ F
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYL 130
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H++ I + DLKPENI ML+D ++ P+ K + G+ +
Sbjct: 131 -HSLQIAHFDLKPENI--------MLLDRNV--------PKPRIKII-----DFGLAHKI 168
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
F ++F + GT E+VAPEI+ +
Sbjct: 169 DFGNEFKN--------------------------------IFGTPEFVAPEIVNYEPLGL 196
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLIRRLL 318
D WS+GV+ + +L GA+PF G +++ET + + E ++ IRRLL
Sbjct: 197 EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLL 256
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
KDP KR+ +++ H + K
Sbjct: 257 VKDPKKRMTIQDSLQHPWIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 126/320 (39%), Gaps = 67/320 (20%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G VV ++ + +A K I K + ++ G I E +L+ +
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFI-------KKRRTKSSRRGVSREDIEREVSILKEI 70
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+HP + L V V ++ G +L ++ E + ++ F
Sbjct: 71 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYL 129
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H++ I + DLKPENI ML+D ++ P+ K + G+ +
Sbjct: 130 -HSLQIAHFDLKPENI--------MLLDRNV--------PKPRIKII-----DFGLAHKI 167
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
F ++F + GT E+VAPEI+ +
Sbjct: 168 DFGNEFKN--------------------------------IFGTPEFVAPEIVNYEPLGL 195
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLIRRLL 318
D WS+GV+ + +L GA+PF G +++ET + + E ++ IRRLL
Sbjct: 196 EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLL 255
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
KDP KR+ +++ H + K
Sbjct: 256 VKDPKKRMTIQDSLQHPWIK 275
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 126/320 (39%), Gaps = 67/320 (20%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G VV ++ + +A K I K + ++ G I E +L+ +
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFI-------KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+HP + L V V ++ G +L ++ E + ++ F
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYL 130
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H++ I + DLKPENI ML+D ++ P+ K + G+ +
Sbjct: 131 -HSLQIAHFDLKPENI--------MLLDRNV--------PKPRIKII-----DFGLAHKI 168
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
F ++F + GT E+VAPEI+ +
Sbjct: 169 DFGNEFKN--------------------------------IFGTPEFVAPEIVNYEPLGL 196
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLIRRLL 318
D WS+GV+ + +L GA+PF G +++ET + + E ++ IRRLL
Sbjct: 197 EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLL 256
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
KDP KR+ +++ H + K
Sbjct: 257 VKDPKKRMTIQDSLQHPWIK 276
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 120/327 (36%), Gaps = 75/327 (22%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G +V ++ + +A K I K ++ + G I E +LR V
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFI-------KKRQSRASRRGVSREEIEREVSILRQV 72
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
H + L V V ++ G +L Q+ E + ++ F
Sbjct: 73 LHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYL 131
Query: 144 XHNMGIVYRDLKPENIMIQENG----HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H I + DLKPENIM+ + HI L+DF LA G+
Sbjct: 132 -HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-----------------LAHEIEDGV 173
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
+ + F GT E+VAPEI+ +
Sbjct: 174 EFKNIF----------------------------------------GTPEFVAPEIVNYE 193
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLI 314
D WS+GV+ + +L GA+PF G +++ET I D E ++ I
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFI 253
Query: 315 RRLLEKDPTKRIGVEEIKGHEFFKGVN 341
R+LL K+ KR+ ++E H + V+
Sbjct: 254 RKLLVKETRKRLTIQEALRHPWITPVD 280
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 126/320 (39%), Gaps = 67/320 (20%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G VV ++ + +A K I K + ++ G I E +L+ +
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFI-------KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+HP + L V V ++ G +L ++ E + ++ F
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYL 130
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H++ I + DLKPENI ML+D ++ P+ K + G+ +
Sbjct: 131 -HSLQIAHFDLKPENI--------MLLDRNV--------PKPRIKII-----DFGLAHKI 168
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
F ++F + GT E+VAPEI+ +
Sbjct: 169 DFGNEFKN--------------------------------IFGTPEFVAPEIVNYEPLGL 196
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLIRRLL 318
D WS+GV+ + +L GA+PF G +++ET + + E ++ IRRLL
Sbjct: 197 EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLL 256
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
KDP KR+ +++ H + K
Sbjct: 257 VKDPKKRMTIQDSLQHPWIK 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 126/320 (39%), Gaps = 67/320 (20%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G VV ++ + +A K I K + ++ G I E +L+ +
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFI-------KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+HP + L V V ++ G +L ++ E + ++ F
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYL 130
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H++ I + DLKPENI ML+D ++ P+ K + G+ +
Sbjct: 131 -HSLQIAHFDLKPENI--------MLLDRNV--------PKPRIKII-----DFGLAHKI 168
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
F ++F + GT E+VAPEI+ +
Sbjct: 169 DFGNEFKN--------------------------------IFGTPEFVAPEIVNYEPLGL 196
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLIRRLL 318
D WS+GV+ + +L GA+PF G +++ET + + E ++ IRRLL
Sbjct: 197 EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLL 256
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
KDP KR+ +++ H + K
Sbjct: 257 VKDPKKRMTIQDSLQHPWIK 276
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVG 305
GT E+VAPEI+ + D WS+GV+ + +L GA+PF G +++ET I D
Sbjct: 194 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 253
Query: 306 E-----PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV 340
E ++ IRRLL KDP +R+ + + H + K +
Sbjct: 254 EYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIKAI 293
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 13/159 (8%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G +V + + + +A K I K + L ++ G I E +LR +
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFI-------KKRRLXSSRRGVSREEIEREVNILREI 86
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + L + V ++ G +L ++ E + D+ +F
Sbjct: 87 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK-ESLTEDEATQFLKQILDGVHYL 145
Query: 144 XHNMGIVYRDLKPENIMIQE----NGHIMLVDFDLSTKL 178
H+ I + DLKPENIM+ + N I L+DF ++ K+
Sbjct: 146 -HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 183
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVG 305
GT E+VAPEI+ + D WS+GV+ + +L GA+PF G +++ET I D
Sbjct: 173 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 232
Query: 306 E-----PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV 340
E ++ IRRLL KDP +R+ + + H + K +
Sbjct: 233 EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI 272
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 13/159 (8%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G +V + + + +A K I K + L+++ G I E +LR +
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFI-------KKRRLSSSRRGVSREEIEREVNILREI 65
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + L + V ++ G +L ++ E + D+ +F
Sbjct: 66 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK-ESLTEDEATQF-LKQILDGVHY 123
Query: 144 XHNMGIVYRDLKPENIMIQE----NGHIMLVDFDLSTKL 178
H+ I + DLKPENIM+ + N I L+DF ++ K+
Sbjct: 124 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 162
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 124/326 (38%), Gaps = 77/326 (23%)
Query: 19 RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
++ LG+GA VV ++ +A K+I +K+L+ D ++++ E R
Sbjct: 34 QLFEELGKGAFSVVRRCVKKTPTQEYAAKII-------NTKKLSARD----HQKLEREAR 82
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
+ R ++HP + RL +S + F D G +L + + +S+
Sbjct: 83 ICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIHQIL 140
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
H IV+RDLKPEN++ LA+ +
Sbjct: 141 ESVNHIHQHDIVHRDLKPENLL------------------------------LASKCKGA 170
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
K F G+++E F GT Y++PE++
Sbjct: 171 AVKLADF-------GLAIE----------------VQGEQQAWFGFAGTPGYLSPEVLRK 207
Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP--------L 310
+ VD W+ GV+L+ +L G PF + + + +I D P+P
Sbjct: 208 DPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDF---PSPEWDTVTPEA 264
Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEF 336
+NLI ++L +P KRI ++ H +
Sbjct: 265 KNLINQMLTINPAKRITADQALKHPW 290
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 120/327 (36%), Gaps = 75/327 (22%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G +V ++ + +A K I K ++ + G I E +LR V
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFI-------KKRQSRASRRGVSREEIEREVSILRQV 72
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
H + L V V ++ G +L Q+ E + ++ F
Sbjct: 73 LHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYL 131
Query: 144 XHNMGIVYRDLKPENIMIQENG----HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H I + DLKPENIM+ + HI L+DF LA G+
Sbjct: 132 -HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-----------------LAHEIEDGV 173
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
+ + F GT E+VAPEI+ +
Sbjct: 174 EFKNIF----------------------------------------GTPEFVAPEIVNYE 193
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLI 314
D WS+GV+ + +L GA+PF G +++ET I D E ++ I
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFI 253
Query: 315 RRLLEKDPTKRIGVEEIKGHEFFKGVN 341
R+LL K+ KR+ ++E H + V+
Sbjct: 254 RKLLVKETRKRLTIQEALRHPWITPVD 280
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 119/329 (36%), Gaps = 78/329 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
I LG GA GVV V + + +FA K + + +S + T + E +
Sbjct: 55 IHEELGTGAFGVVHRVTERATGNNFAAKFV---MTPHESDKET----------VRKEIQT 101
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
+ + HP L L D + ++ G +L + +M D+ + +
Sbjct: 102 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKG 161
Query: 140 XXXXXHNMGIVYRDLKPENIMI--QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
H V+ DLKPENIM + + + L+DF L+ L PK + T
Sbjct: 162 LCHM-HENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD-------PKQSVKVTT-- 211
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
GT E+ APE+ E
Sbjct: 212 ------------------------------------------------GTAEFAAPEVAE 223
Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-----VGEPTPLRN 312
GK + D WS+GV+ + +L G +PF G + ET + ++ G ++
Sbjct: 224 GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKD 283
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
IR+LL DP R+ + + H + N
Sbjct: 284 FIRKLLLADPNTRMTIHQALEHPWLTPGN 312
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 120/327 (36%), Gaps = 75/327 (22%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G +V ++ + +A K I K ++ + G I E +LR V
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFI-------KKRQSRASRRGVSREEIEREVSILRQV 72
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
H + L V V ++ G +L Q+ E + ++ F
Sbjct: 73 LHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYL 131
Query: 144 XHNMGIVYRDLKPENIMIQENG----HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H I + DLKPENIM+ + HI L+DF LA G+
Sbjct: 132 -HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFG-----------------LAHEIEDGV 173
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
+ + F GT E+VAPEI+ +
Sbjct: 174 EFKNIF----------------------------------------GTPEFVAPEIVNYE 193
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLI 314
D WS+GV+ + +L GA+PF G +++ET I D E ++ I
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFI 253
Query: 315 RRLLEKDPTKRIGVEEIKGHEFFKGVN 341
R+LL K+ KR+ ++E H + V+
Sbjct: 254 RKLLVKETRKRLTIQEALRHPWITPVD 280
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 99/256 (38%), Gaps = 56/256 (21%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
LG+G G V E+ E +K EL D + R E +V+R
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMK------------ELIRFDE-ETQRTFLKEVKVMRC 63
Query: 83 VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+EHP + + GVL DK + + +Y G L + K Q + F
Sbjct: 64 LEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAY 123
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H+M I++RDL N +++EN ++++ DF L+ + + Q L R KKR
Sbjct: 124 L-HSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDR---KKR 179
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
+ VG ++APE+I G+ +D
Sbjct: 180 YT---------------------------------------VVGNPYWMAPEMINGRSYD 200
Query: 263 FAVDWWSLGVVLHEML 278
VD +S G+VL E++
Sbjct: 201 EKVDVFSFGIVLCEII 216
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 119/321 (37%), Gaps = 74/321 (23%)
Query: 19 RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
+IV LG G V+L +D + A+K I+ I + KE T +R E
Sbjct: 14 KIVDKLGGGGMSTVYLAEDTILNIKVAIKAIF---IPPREKEET-------LKRFEREVH 63
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
+ H + + V D ++Y G L +S S DT
Sbjct: 64 NSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI--ESHGPLSVDTAINFTNQIL 121
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
H+M IV+RD+KP+NI+I N + + DF G
Sbjct: 122 DGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDF-------------------------G 156
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
I K S SL H +GT +Y +PE +G
Sbjct: 157 IAK--------ALSETSLTQTNH----------------------VLGTVQYFSPEQAKG 186
Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYR-ILCRPPDLVGE-----PTPLRN 312
+ D D +S+G+VL+EML G PF G + + I P++ + P L N
Sbjct: 187 EATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSN 246
Query: 313 LIRRLLEKDPTKRI-GVEEIK 332
+I R EKD R ++E+K
Sbjct: 247 VILRATEKDKANRYKTIQEMK 267
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 108/280 (38%), Gaps = 71/280 (25%)
Query: 19 RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
R+ +G+G V L + V + A+K+I + + N +++ E R
Sbjct: 18 RLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQL-----------NPTSLQKLFREVR 66
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
+++ + HP + +L V+ T+K + ++Y G ++ + +F
Sbjct: 67 IMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 126
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
H IV+RDLK EN+++ + +I + DF S + +
Sbjct: 127 VQYC--HQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNK--------------- 169
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
L FC G+ Y APE+ +G
Sbjct: 170 -------LDTFC-----------------------------------GSPPYAAPELFQG 187
Query: 259 KGHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL 297
K +D VD WSLGV+L+ ++ G+ PF G + KE R+L
Sbjct: 188 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 227
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 133/331 (40%), Gaps = 79/331 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIE-KKSKELTNNDNGDKYRRISFEQR 78
+ +G+GA VV + E+ + FA+K++ D+ + S L+ D + E
Sbjct: 28 LCEVIGKGAFSVVRRCINRETGQQFAVKIV--DVAKFTSSPGLSTED-------LKREAS 78
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIRFXXXX 136
+ ++HP + L S+D + ++ G DL +++ + ++S+
Sbjct: 79 ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138
Query: 137 XXXXXXXXHNMGIVYRDLKPENIMI---QENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
H+ I++RD+KPEN+++ + + + L DF ++ +L ++ L A
Sbjct: 139 ILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG--------ESGLVA 190
Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAP 253
R G T ++AP
Sbjct: 191 GGRVG------------------------------------------------TPHFMAP 202
Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK------ETFYRILCRPPDLVGEP 307
E+++ + + VD W GV+L +L G PF G+ + + Y++ R + E
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISES 262
Query: 308 TPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
++L+RR+L DP +RI V E H + K
Sbjct: 263 A--KDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV 304
GT Y+APE+ + + F D WS GVV++ +L G PF G+S +E + + P+
Sbjct: 187 AGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYA 245
Query: 305 GEPTPLR----NLIRRLLEKDPTKRIGVEEIKGHEFFK 338
E PL +L++++L KDP +R ++ HE+FK
Sbjct: 246 VECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFK 283
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG GA G V LV++ S +E+ K + + + +I E VL+++
Sbjct: 30 LGSGAFGDVHLVEERSSG------------LERVIKTINKDRSQVPMEQIEAEIEVLKSL 77
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIRFXXXXXXXXX 141
+HP + ++ V + ++ C G +L + Q + S+ +
Sbjct: 78 DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNAL 137
Query: 142 XXXHNMGIVYRDLKPENIMIQE---NGHIMLVDFDLS 175
H+ +V++DLKPENI+ Q+ + I ++DF L+
Sbjct: 138 AYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVG 305
GT E+VAPEI+ + D WS+GV+ + +L GA+PF G +++ET + +
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 306 E-----PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
E ++ IRRLL KDP KR+ +++ H + K
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
Score = 35.0 bits (79), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 65/159 (40%), Gaps = 13/159 (8%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G VV ++ + +A K I K + ++ G I E +L+ +
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFI-------KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+HP + L V V + G +L ++ E + ++ F
Sbjct: 72 QHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYL 130
Query: 144 XHNMGIVYRDLKPENIMIQENG----HIMLVDFDLSTKL 178
H++ I + DLKPENIM+ + I ++DF L+ K+
Sbjct: 131 -HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 124/319 (38%), Gaps = 78/319 (24%)
Query: 27 GAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHP 86
G G V+ ++ E+S A KVI + KS+E + E +L + +HP
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVI-----DTKSEE--------ELEDYMVEIDILASCDHP 67
Query: 87 LLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXXXHN 146
+ +L + + I++C G + ++ + E+ ++ I+ H+
Sbjct: 68 NIVKLLDAFYYENNLWILIEFCAGGAVDAVM-LELERPLTESQIQVVCKQTLDALNYLHD 126
Query: 147 MGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFL 206
I++RDLK NI+ +G I L DF +S K NTR+ I++R S
Sbjct: 127 NKIIHRDLKAGNILFTLDGDIKLADFGVSAK----------------NTRTXIQRRDS-- 168
Query: 207 SKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEII-----EGKGH 261
F+GT ++APE++ + + +
Sbjct: 169 -------------------------------------FIGTPYWMAPEVVMCETSKDRPY 191
Query: 262 DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP----TPLRNLIRRL 317
D+ D WSLG+ L EM P + +I P + +P + ++ +++
Sbjct: 192 DYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKC 251
Query: 318 LEKDPTKRIGVEEIKGHEF 336
LEK+ R ++ H F
Sbjct: 252 LEKNVDARWTTSQLLQHPF 270
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 118/329 (35%), Gaps = 78/329 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
I LG GA GVV V + + +FA K + + +S + T + E +
Sbjct: 161 IHEELGTGAFGVVHRVTERATGNNFAAKFV---MTPHESDKET----------VRKEIQT 207
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
+ + HP L L D + ++ G +L + +M D+ + +
Sbjct: 208 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKG 267
Query: 140 XXXXXHNMGIVYRDLKPENIMI--QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
H V+ DLKPENIM + + + L+DF L T PK + T
Sbjct: 268 LCHM-HENNYVHLDLKPENIMFTTKRSNELKLIDFGL-------TAHLDPKQSVKVTT-- 317
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
GT E+ APE+ E
Sbjct: 318 ------------------------------------------------GTAEFAAPEVAE 329
Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL-----VGEPTPLRN 312
GK + D WS+GV+ + +L G +PF G + ET + ++ G ++
Sbjct: 330 GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKD 389
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
IR+LL DP R+ + + H + N
Sbjct: 390 FIRKLLLADPNTRMTIHQALEHPWLTPGN 418
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVG 305
GT E+VAPEI+ + D WS+GV+ + +L GA+PF G +++ET I D
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 239
Query: 306 E-----PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
E ++ IRRLL KDP +R+ + + H + K
Sbjct: 240 EYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIKA 278
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 13/159 (8%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G +V + + + +A K I K + L+++ G I E +LR +
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFI-------KKRRLSSSRRGVSREEIEREVNILREI 72
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + L + V ++ G +L ++ E + D+ +F
Sbjct: 73 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK-ESLTEDEATQF-LKQILDGVHY 130
Query: 144 XHNMGIVYRDLKPENIMIQE----NGHIMLVDFDLSTKL 178
H+ I + DLKPENIM+ + N I L+DF ++ K+
Sbjct: 131 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 169
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 129/360 (35%), Gaps = 95/360 (26%)
Query: 4 VVNDRPIRSLD---FSCLR-------IVSALGRGAKGVVFLVKDVESSESFALKVIWRDL 53
+ +D P RSLD S LR +V +G G G V+ + V++ + A+KV+
Sbjct: 2 MASDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVM---- 57
Query: 54 IEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPL-LPRLRGVL------STDKFVGYAID 106
+ GD+ I E +L+ H + G D + ++
Sbjct: 58 ----------DVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVME 107
Query: 107 YCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGH 166
+C + L K ++ I + H +++RD+K +N+++ EN
Sbjct: 108 FCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAE 167
Query: 167 IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXX 226
+ LVDF +S +L +TV NT
Sbjct: 168 VKLVDFGVSAQLD--------RTVGRRNT------------------------------- 188
Query: 227 XXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-----GKGHDFAVDWWSLGVVLHEMLYGA 281
F+GT ++APE+I +DF D WSLG+ EM GA
Sbjct: 189 -----------------FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGA 231
Query: 282 TPFRGSSRKETFYRILCRP-PDLVGE--PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
P + I P P L + ++ I L K+ ++R E++ H F +
Sbjct: 232 PPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIR 291
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 129/328 (39%), Gaps = 91/328 (27%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
LG G G V + K + A+K++ R +++ + D K RR E + L+
Sbjct: 23 TLGVGTFGKVKVGKHELTGHKVAVKILNR-------QKIRSLDVVGKIRR---EIQNLKL 72
Query: 83 VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-------LRKQQSEQMFSDDTIRFXXX 135
HP + +L V+ST + ++Y G +L L +++S ++F
Sbjct: 73 FRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQ-------- 124
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
H +V+RDLKPEN+++ + + + DF L
Sbjct: 125 -ILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGL--------------------- 162
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
S + FL C G+ Y APE+
Sbjct: 163 -SNMMSDGEFLRXSC-----------------------------------GSPNYAAPEV 186
Query: 256 IEGKGHDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLR--- 311
I G+ + VD WS GV+L+ +L G PF T ++ +C + P L
Sbjct: 187 ISGRLYAGPEVDIWSSGVILYALLCGTLPF-DDDHVPTLFKKICD--GIFYTPQYLNPSV 243
Query: 312 -NLIRRLLEKDPTKRIGVEEIKGHEFFK 338
+L++ +L+ DP KR +++I+ HE+FK
Sbjct: 244 ISLLKHMLQVDPMKRATIKDIREHEWFK 271
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 124/320 (38%), Gaps = 67/320 (20%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G VV ++ + +A K I K + ++ G I E +L+ +
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFI-------KKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+HP + L V V ++ G +L ++ E + ++ F
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYL 130
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H++ I + DLKPENI ML+D ++ P+ K + G+ +
Sbjct: 131 -HSLQIAHFDLKPENI--------MLLDRNV--------PKPRIKII-----DFGLAHKI 168
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
F ++F GT +VAPEI+ +
Sbjct: 169 DFGNEF--------------------------------KNIFGTPAFVAPEIVNYEPLGL 196
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE-----PTPLRNLIRRLL 318
D WS+GV+ + +L GA+PF G +++ET + + E ++ IRRLL
Sbjct: 197 EADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLL 256
Query: 319 EKDPTKRIGVEEIKGHEFFK 338
KDP KR+ +++ H + K
Sbjct: 257 VKDPKKRMTIQDSLQHPWIK 276
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 122/319 (38%), Gaps = 70/319 (21%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR-ISFEQRV 79
V LG GA G V L K+ A+KVI + +K + +N N +K+ I E +
Sbjct: 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDK-GRYSDDNKNIEKFHEEIYNEISL 99
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L++++HP + +L V K+ ++ G +L + + F +
Sbjct: 100 LKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL--FEQIINRHKFDECDAANIMKQILS 157
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENG---HIMLVDFDLSTKLSPKTPQASPKTVLAANTR 196
H IV+RD+KPENI+++ +I +VDF L
Sbjct: 158 GICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGL---------------------- 195
Query: 197 SGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEII 256
S F S L D + GT Y+APE++
Sbjct: 196 ----------SSFFSKDYKLRDRL-------------------------GTAYYIAPEVL 220
Query: 257 EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-----LCRPPDLVGEPTPLR 311
+ K ++ D WS GV+++ +L G PF G + ++ ++ D +
Sbjct: 221 KKKYNE-KCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAK 279
Query: 312 NLIRRLLEKDPTKRIGVEE 330
LI+ +L D KR EE
Sbjct: 280 ELIKLMLTYDYNKRCTAEE 298
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 134/371 (36%), Gaps = 100/371 (26%)
Query: 13 LDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRR 72
+D + V +G G GVV+ ++ + E ALK I D T R
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIRE 56
Query: 73 ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
IS +L+ + HP + +L V+ T+ + ++ +DL + I+
Sbjct: 57 IS----LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKS 111
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
H+ +++RDLKP+N++I G I L DF L+
Sbjct: 112 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA----------------- 154
Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVA 252
R+F G+ + H V T Y A
Sbjct: 155 ----------RAF-------GVPVRTYTHE----------------------VVTLWYRA 175
Query: 253 PEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP-- 307
PEI+ G K + AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 235
Query: 308 ----------------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 236 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 295
Query: 342 WEL-LLKISRP 351
+ L++ RP
Sbjct: 296 KPVPHLRLERP 306
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 119/315 (37%), Gaps = 78/315 (24%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+GA VV + FA K+I +K+L+ D ++++ E R+ R +
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKII-------NTKKLSARD----FQKLEREARICRKL 62
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+HP + RL + + F D G +L + + +S+
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAY 120
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H+ GIV+R+LKPEN++ LA+ + K
Sbjct: 121 CHSNGIVHRNLKPENLL------------------------------LASKAKGAAVKLA 150
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
F G+++E F GT Y++PE+++ +
Sbjct: 151 DF-------GLAIE-----------------VNDSEAWHGFAGTPGYLSPEVLKKDPYSK 186
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP--------LRNLIR 315
VD W+ GV+L+ +L G PF + + +I D P+P ++LI
Sbjct: 187 PVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY---PSPEWDTVTPEAKSLID 243
Query: 316 RLLEKDPTKRIGVEE 330
+L +P KRI ++
Sbjct: 244 SMLTVNPKKRITADQ 258
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 119/315 (37%), Gaps = 78/315 (24%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+GA VV + FA K+I +K+L+ D ++++ E R+ R +
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKII-------NTKKLSARD----FQKLEREARICRKL 62
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+HP + RL + + F D G +L + + +S+
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAY 120
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H+ GIV+R+LKPEN++ LA+ + K
Sbjct: 121 CHSNGIVHRNLKPENLL------------------------------LASKAKGAAVKLA 150
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
F G+++E F GT Y++PE+++ +
Sbjct: 151 DF-------GLAIE-----------------VNDSEAWHGFAGTPGYLSPEVLKKDPYSK 186
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP--------LRNLIR 315
VD W+ GV+L+ +L G PF + + +I D P+P ++LI
Sbjct: 187 PVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY---PSPEWDTVTPEAKSLID 243
Query: 316 RLLEKDPTKRIGVEE 330
+L +P KRI ++
Sbjct: 244 SMLTVNPKKRITADQ 258
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 119/315 (37%), Gaps = 78/315 (24%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+GA VV + FA K+I +K+L+ D ++++ E R+ R +
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKII-------NTKKLSARD----FQKLEREARICRKL 61
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+HP + RL + + F D G +L + + +S+
Sbjct: 62 QHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAY 119
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H+ GIV+R+LKPEN++ LA+ + K
Sbjct: 120 CHSNGIVHRNLKPENLL------------------------------LASKAKGAAVKLA 149
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
F G+++E F GT Y++PE+++ +
Sbjct: 150 DF-------GLAIE-----------------VNDSEAWHGFAGTPGYLSPEVLKKDPYSK 185
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP--------LRNLIR 315
VD W+ GV+L+ +L G PF + + +I D P+P ++LI
Sbjct: 186 PVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY---PSPEWDTVTPEAKSLID 242
Query: 316 RLLEKDPTKRIGVEE 330
+L +P KRI ++
Sbjct: 243 SMLTVNPKKRITADQ 257
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 126/352 (35%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 55
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + + I+
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I G I L DF L+
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------------- 149
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
R+F G+ + H V T Y APEI+ G K
Sbjct: 150 --RAF-------GVPVRTYTHE----------------------VVTLWYRAPEILLGCK 178
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 119/315 (37%), Gaps = 78/315 (24%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+GA VV + FA K+I +K+L+ D ++++ E R+ R +
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKII-------NTKKLSARD----FQKLEREARICRKL 85
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+HP + RL + + F D G +L + + +S+
Sbjct: 86 QHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAY 143
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H+ GIV+R+LKPEN+ +LA+ + K
Sbjct: 144 CHSNGIVHRNLKPENL------------------------------LLASKAKGAAVKLA 173
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
F G+++E F GT Y++PE+++ +
Sbjct: 174 DF-------GLAIE-----------------VNDSEAWHGFAGTPGYLSPEVLKKDPYSK 209
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP--------LRNLIR 315
VD W+ GV+L+ +L G PF + + +I D P+P ++LI
Sbjct: 210 PVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY---PSPEWDTVTPEAKSLID 266
Query: 316 RLLEKDPTKRIGVEE 330
+L +P KRI ++
Sbjct: 267 SMLTVNPKKRITADQ 281
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 125/352 (35%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 56
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + I+
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I G I L DF L+
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------------- 150
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
R+F G+ + H V T Y APEI+ G K
Sbjct: 151 --RAF-------GVPVRTYTHE----------------------VVTLWYRAPEILLGCK 179
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 125/352 (35%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 55
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + I+
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I G I L DF L+
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------------- 149
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
R+F G+ + H V T Y APEI+ G K
Sbjct: 150 --RAF-------GVPVRTYTHE----------------------VVTLWYRAPEILLGCK 178
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 125/318 (39%), Gaps = 76/318 (23%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G G+ G+V L ++ S A+K++ DL +++ +EL N E ++R+
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMM--DLRKQQRRELLFN-----------EVVIMRDY 99
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+H + + + + +++ G L + Q +++ I
Sbjct: 100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR---LNEEQIATVCEAVLQALAY 156
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H G+++RD+K ++I++ +G + L DF A + KR+
Sbjct: 157 LHAQGVIHRDIKSDSILLTLDGRVKLSDFGF-----------------CAQISKDVPKRK 199
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
VGT ++APE+I +
Sbjct: 200 XL---------------------------------------VGTPYWMAPEVISRSLYAT 220
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVG---EPTP-LRNLIRRLLE 319
VD WSLG+++ EM+ G P+ S + R+ PP + + +P LR+ + R+L
Sbjct: 221 EVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLV 280
Query: 320 KDPTKRIGVEEIKGHEFF 337
+DP +R +E+ H F
Sbjct: 281 RDPQERATAQELLDHPFL 298
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 119/326 (36%), Gaps = 81/326 (24%)
Query: 22 SALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLR 81
S LGRGA +V+ K + + +ALKV+ + ++KK + E VL
Sbjct: 59 SELGRGATSIVYRCKQKGTQKPYALKVL-KKTVDKKI--------------VRTEIGVLL 103
Query: 82 NVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS--LRKQQSEQMFSDDTIRFXXXXXXX 139
+ HP + +L+ + T + ++ G +L + K + + D ++
Sbjct: 104 RLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK----QILE 159
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H GIV+RDLKPEN++ TP +A S I
Sbjct: 160 AVAYLHENGIVHRDLKPENLLYA-------------------TPAPDAPLKIADFGLSKI 200
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
+ + + C GT Y APEI+ G
Sbjct: 201 VEHQVLMKTVC-----------------------------------GTPGYCAPEILRGC 225
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP------TPLRNL 313
+ VD WS+G++ + +L G PF + +R + P ++L
Sbjct: 226 AYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDL 285
Query: 314 IRRLLEKDPTKRIGVEEIKGHEFFKG 339
+R+L+ DP KR+ + H + G
Sbjct: 286 VRKLIVLDPKKRLTTFQALQHPWVTG 311
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 125/352 (35%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 56
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + I+
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I G I L DF L+
Sbjct: 116 LSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------------- 150
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
R+F G+ + H V T Y APEI+ G K
Sbjct: 151 --RAF-------GVPVRTYTHE----------------------VVTLWYRAPEILLGCK 179
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 125/352 (35%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 63
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + I+
Sbjct: 64 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 122
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I G I L DF L+
Sbjct: 123 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------------- 157
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
R+F G+ + H V T Y APEI+ G K
Sbjct: 158 --RAF-------GVPVRTYTHE----------------------VVTLWYRAPEILLGCK 186
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 246
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 247 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 298
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 125/352 (35%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 56
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + I+
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I G I L DF L+
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------------- 150
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
R+F G+ + H V T Y APEI+ G K
Sbjct: 151 --RAF-------GVPVRTYTHE----------------------VVTLWYRAPEILLGCK 179
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 125/352 (35%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 57
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + I+
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I G I L DF L+
Sbjct: 117 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------------- 151
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
R+F G+ + H V T Y APEI+ G K
Sbjct: 152 --RAF-------GVPVRTYTHE----------------------VVTLWYRAPEILLGCK 180
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 125/352 (35%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 55
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + I+
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I G I L DF L+
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------------- 149
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
R+F G+ + H V T Y APEI+ G K
Sbjct: 150 --RAF-------GVPVRTYTHE----------------------VVTLWYRAPEILLGCK 178
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 125/352 (35%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 56
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + I+
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I G I L DF L+
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------------- 150
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
R+F G+ + H V T Y APEI+ G K
Sbjct: 151 --RAF-------GVPVRTYTHE----------------------VVTLWYRAPEILLGXK 179
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 125/352 (35%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 63
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + I+
Sbjct: 64 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 122
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I G I L DF L+
Sbjct: 123 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------------- 157
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
R+F G+ + H V T Y APEI+ G K
Sbjct: 158 --RAF-------GVPVRTYTHE----------------------VVTLWYRAPEILLGXK 186
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 246
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 247 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 298
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEGK HD VD W GV+ +E L G PF S ET RI+ +
Sbjct: 172 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF 231
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
P + + + ++LI +LL P +R+ ++ + H + K
Sbjct: 232 PPFLSDGS--KDLISKLLRYHPPQRLPLKGVMEHPWVKA 268
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 76/173 (43%), Gaps = 12/173 (6%)
Query: 4 VVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTN 63
+ + P R IV LG+G G V+L ++ ++ ALKV+++ +EK+ E
Sbjct: 2 ALAEMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--- 58
Query: 64 NDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQ 123
+ RR E + ++ HP + R+ K + +++ P +L+ ++ Q
Sbjct: 59 ----HQLRR---EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELY--KELQKHG 109
Query: 124 MFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
F + H +++RD+KPEN+++ G + + DF S
Sbjct: 110 RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV 162
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEGK HD VD W GV+ +E L G PF S ET RI+ +
Sbjct: 173 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF 232
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
P + + + ++LI +LL P +R+ ++ + H + K
Sbjct: 233 PPFLSDGS--KDLISKLLRYHPPQRLPLKGVMEHPWVKA 269
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 75/175 (42%), Gaps = 12/175 (6%)
Query: 2 NDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL 61
N + + P R I LG+G G V+L ++ ++ ALKV+++ +EK+ E
Sbjct: 1 NTALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE- 59
Query: 62 TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS 121
++ E + ++ HP + R+ K + +++ P +L+ ++ Q
Sbjct: 60 ---------HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELY--KELQK 108
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
F + H +++RD+KPEN+++ G + + DF S
Sbjct: 109 HGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV 163
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
GT +Y+ PE+IEGK HD VD W GV+ +E L G PF S ET RI+ +
Sbjct: 172 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF 231
Query: 301 PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
P + + + ++LI +LL P +R+ ++ + H + K
Sbjct: 232 PPFLSDGS--KDLISKLLRYHPPQRLPLKGVMEHPWVKA 268
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 75/173 (43%), Gaps = 12/173 (6%)
Query: 4 VVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTN 63
+ + P R I LG+G G V+L ++ ++ ALKV+++ +EK+ E
Sbjct: 2 ALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--- 58
Query: 64 NDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQ 123
+ RR E + ++ HP + R+ K + +++ P +L+ ++ Q
Sbjct: 59 ----HQLRR---EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELY--KELQKHG 109
Query: 124 MFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLST 176
F + H +++RD+KPEN+++ G + + DF S
Sbjct: 110 RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV 162
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 127/326 (38%), Gaps = 81/326 (24%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL-R 81
LG+G G+V+ +D+ + A+K E+ D+ +Y + E+ L +
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIK------------EIPERDS--RYSQPLHEEIALHK 74
Query: 82 NVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSL-RKQQSEQMFSDDTIRFXXXXXXXX 140
+++H + + G S + F+ ++ PG L +L R + ++ TI F
Sbjct: 75 HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG 134
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ IV+RD+K +N++I NT SG+
Sbjct: 135 LKYLHDNQIVHRDIKGDNVLI--------------------------------NTYSGVL 162
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-- 258
K F + +GI +P F GT +Y+APEII+
Sbjct: 163 KISDFGTSKRLAGI---NPC--------------------TETFTGTLQYMAPEIIDKGP 199
Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPF------RGSSRKETFYRILCRPPDLVGEPTPLRN 312
+G+ A D WSLG + EM G PF + + K +++ P+ + +
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEA--KA 257
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFFK 338
I + E DP KR ++ EF K
Sbjct: 258 FILKCFEPDPDKRACANDLLVDEFLK 283
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 127/326 (38%), Gaps = 81/326 (24%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL-R 81
LG+G G+V+ +D+ + A+K E+ D+ +Y + E+ L +
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIK------------EIPERDS--RYSQPLHEEIALHK 60
Query: 82 NVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSL-RKQQSEQMFSDDTIRFXXXXXXXX 140
+++H + + G S + F+ ++ PG L +L R + ++ TI F
Sbjct: 61 HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG 120
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ IV+RD+K +N++I NT SG+
Sbjct: 121 LKYLHDNQIVHRDIKGDNVLI--------------------------------NTYSGVL 148
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-- 258
K F + +GI +P F GT +Y+APEII+
Sbjct: 149 KISDFGTSKRLAGI---NPC--------------------TETFTGTLQYMAPEIIDKGP 185
Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPF------RGSSRKETFYRILCRPPDLVGEPTPLRN 312
+G+ A D WSLG + EM G PF + + K +++ P+ + +
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEA--KA 243
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFFK 338
I + E DP KR ++ EF K
Sbjct: 244 FILKCFEPDPDKRACANDLLVDEFLK 269
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 125/326 (38%), Gaps = 70/326 (21%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELT--------NNDNGDKYRR 72
++ LG+GA G V ++ S +A+K I R EK S L+ N+ +Y
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 73 ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
E+R N P+ + + ++YC R L+ L ++ D+ R
Sbjct: 70 AWLERR---NFVKPM-----TAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
H+ GI++RDLKP NI I E+ ++ + DF LA
Sbjct: 122 FRQILEALSYI-HSQGIIHRDLKPMNIFIDESRNVKIGDFG-----------------LA 163
Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVA 252
N + + S +L + GT YVA
Sbjct: 164 KNVHRSLDILKLDSQNLPGSSDNLTSAI-------------------------GTAMYVA 198
Query: 253 PEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-----PPDLVGE 306
E+++G GH + +D +SLG++ EM+Y PF + + L PPD
Sbjct: 199 TEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDN 255
Query: 307 PTPL-RNLIRRLLEKDPTKRIGVEEI 331
+ + +IR L++ DP KR G +
Sbjct: 256 KMKVEKKIIRLLIDHDPNKRPGARTL 281
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 134/336 (39%), Gaps = 87/336 (25%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYR-RISFEQR 78
I+ +G G VF V + E + +A+K + + E +N D YR I++ +
Sbjct: 16 ILKQIGSGGSSKVFQVLN-EKKQIYAIKYV--------NLEEADNQTLDSYRNEIAYLNK 66
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFXXXXX 137
+ ++ + + RL TD+++ Y + C DL+S L+K++S + +
Sbjct: 67 LQQHSDKII--RLYDYEITDQYI-YMVMECGNIDLNSWLKKKKSIDPWERKS---YWKNM 120
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
H GIV+ DLKP N +I + G + L+DF ++ ++ P +T S
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP-------------DTTS 166
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
+K + VGT Y+ PE I+
Sbjct: 167 VVKDSQ-----------------------------------------VGTVNYMPPEAIK 185
Query: 258 GKGHD-----------FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE 306
D WSLG +L+ M YG TPF+ + + + P +
Sbjct: 186 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 245
Query: 307 P----TPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
P L+++++ L++DP +RI + E+ H + +
Sbjct: 246 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 281
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
+V LG GA G V L + + E+ A+K++ D+ K++ + N I E +
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEIXI 57
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
+ + H + + G ++YC G +L R + M D RF
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 116
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H +GI +RD+KPEN+++ E ++ + DF L+ TV N R
Sbjct: 117 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRE-- 160
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
L+K C GT YVAPE+++ +
Sbjct: 161 ----RLLNKMC-----------------------------------GTLPYVAPELLKRR 181
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
H VD WS G+VL ML G P+ S Y + P + + PL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPL-A 239
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
L+ ++L ++P+ RI + +IK ++
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWY 264
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 134/336 (39%), Gaps = 87/336 (25%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYR-RISFEQR 78
I+ +G G VF V + E + +A+K + + E +N D YR I++ +
Sbjct: 60 ILKQIGSGGSSKVFQVLN-EKKQIYAIKYV--------NLEEADNQTLDSYRNEIAYLNK 110
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFXXXXX 137
+ ++ + + RL TD+++ Y + C DL+S L+K++S + +
Sbjct: 111 LQQHSDKII--RLYDYEITDQYI-YMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNM 164
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
H GIV+ DLKP N +I + G + L+DF ++ ++ P +T S
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP-------------DTTS 210
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
+K + VGT Y+ PE I+
Sbjct: 211 VVKDSQ-----------------------------------------VGTVNYMPPEAIK 229
Query: 258 GKGHD-----------FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE 306
D WSLG +L+ M YG TPF+ + + + P +
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 289
Query: 307 P----TPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
P L+++++ L++DP +RI + E+ H + +
Sbjct: 290 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 134/336 (39%), Gaps = 87/336 (25%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYR-RISFEQR 78
I+ +G G VF V + E + +A+K + + E +N D YR I++ +
Sbjct: 32 ILKQIGSGGSSKVFQVLN-EKKQIYAIKYV--------NLEEADNQTLDSYRNEIAYLNK 82
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFXXXXX 137
+ ++ + + RL TD+++ Y + C DL+S L+K++S + +
Sbjct: 83 LQQHSDKII--RLYDYEITDQYI-YMVMECGNIDLNSWLKKKKSIDPWERKS---YWKNM 136
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
H GIV+ DLKP N +I + G + L+DF ++ ++ P +T S
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP-------------DTTS 182
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
+K + VGT Y+ PE I+
Sbjct: 183 VVKDSQ-----------------------------------------VGTVNYMPPEAIK 201
Query: 258 GKGHD-----------FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE 306
D WSLG +L+ M YG TPF+ + + + P +
Sbjct: 202 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 261
Query: 307 P----TPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
P L+++++ L++DP +RI + E+ H + +
Sbjct: 262 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
+V LG GA G V L + + E+ A+K++ D+ K++ + N I E +
Sbjct: 10 LVQTLGEGAAGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 57
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
+ + H + + G ++YC G +L R + M D RF
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 116
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H +GI +RD+KPEN+++ E ++ + DF L+ TV N R
Sbjct: 117 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRE-- 160
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
L+K C GT YVAPE+++ +
Sbjct: 161 ----RLLNKMC-----------------------------------GTLPYVAPELLKRR 181
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
H VD WS G+VL ML G P+ S Y + P + + PL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 239
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
L+ ++L ++P+ RI + +IK ++
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWY 264
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 134/336 (39%), Gaps = 87/336 (25%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYR-RISFEQR 78
I+ +G G VF V + E + +A+K + + E +N D YR I++ +
Sbjct: 12 ILKQIGSGGSSKVFQVLN-EKKQIYAIKYV--------NLEEADNQTLDSYRNEIAYLNK 62
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFXXXXX 137
+ ++ + + RL TD+++ Y + C DL+S L+K++S + +
Sbjct: 63 LQQHSDKII--RLYDYEITDQYI-YMVMECGNIDLNSWLKKKKSIDPWERKS---YWKNM 116
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
H GIV+ DLKP N +I + G + L+DF ++ ++ P +T S
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP-------------DTTS 162
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
+K + VGT Y+ PE I+
Sbjct: 163 VVKDSQ-----------------------------------------VGTVNYMPPEAIK 181
Query: 258 GKGHD-----------FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE 306
D WSLG +L+ M YG TPF+ + + + P +
Sbjct: 182 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 241
Query: 307 P----TPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
P L+++++ L++DP +RI + E+ H + +
Sbjct: 242 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 134/336 (39%), Gaps = 87/336 (25%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYR-RISFEQR 78
I+ +G G VF V + E + +A+K + + E +N D YR I++ +
Sbjct: 13 ILKQIGSGGSSKVFQVLN-EKKQIYAIKYV--------NLEEADNQTLDSYRNEIAYLNK 63
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFXXXXX 137
+ ++ + + RL TD+++ Y + C DL+S L+K++S + +
Sbjct: 64 LQQHSDKII--RLYDYEITDQYI-YMVMECGNIDLNSWLKKKKSIDPWERKS---YWKNM 117
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
H GIV+ DLKP N +I + G + L+DF ++ ++ P +T S
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP-------------DTTS 163
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
+K + VGT Y+ PE I+
Sbjct: 164 VVKDSQ-----------------------------------------VGTVNYMPPEAIK 182
Query: 258 GKGHD-----------FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE 306
D WSLG +L+ M YG TPF+ + + + P +
Sbjct: 183 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 242
Query: 307 P----TPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
P L+++++ L++DP +RI + E+ H + +
Sbjct: 243 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 124/352 (35%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E AL I D T R IS +L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLD-------TETEGVPSTAIREIS----LL 56
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + I+
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I G I L DF L+
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------------- 150
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
R+F G+ + H V T Y APEI+ G K
Sbjct: 151 --RAF-------GVPVRTYTHE----------------------VVTLWYRAPEILLGCK 179
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 124/352 (35%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E AL I D T R IS +L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLD-------TETEGVPSTAIREIS----LL 55
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + I+
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I G I L DF L+
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA------------------------- 149
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
R+F G+ + H V T Y APEI+ G K
Sbjct: 150 --RAF-------GVPVRTYTHE----------------------VVTLWYRAPEILLGCK 178
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
+V LG GA G V L + + E+ A+K++ D+ K++ + N I E +
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 58
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
+ + H + + G ++YC G +L R + M D RF
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 117
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H +GI +RD+KPEN+++ E ++ + DF L+ TV N
Sbjct: 118 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNN---- 159
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
R L+K C GT YVAPE+++ +
Sbjct: 160 --RERLLNKMC-----------------------------------GTLPYVAPELLKRR 182
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
H VD WS G+VL ML G P+ S Y + P + + PL
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 240
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
L+ ++L ++P+ RI + +IK ++
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWY 265
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 125/319 (39%), Gaps = 76/319 (23%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G G+ G+V + + + + A+K + DL +++ +EL N E ++R+
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKM--DLRKQQRRELLFN-----------EVVIMRDY 99
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
H + + + +++ G L + + +++ I
Sbjct: 100 HHDNVVDMYSSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIATVCLSVLRALSY 156
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
HN G+++RD+K ++I++ +G I L DF
Sbjct: 157 LHNQGVIHRDIKSDSILLTSDGRIKLSDFG------------------------------ 186
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
FC+ +S E P VGT ++APE+I +
Sbjct: 187 -----FCAQ-VSKEVP--------------------KRKXLVGTPYWMAPEVISRLPYGT 220
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-CRPP---DLVGEPTPLRNLIRRLLE 319
VD WSLG+++ EM+ G P+ + RI PP DL + LR + +L
Sbjct: 221 EVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLV 280
Query: 320 KDPTKRIGVEEIKGHEFFK 338
++P++R +E+ GH F K
Sbjct: 281 REPSQRATAQELLGHPFLK 299
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-----LCR 299
+GT Y+APE++ K +D D WS GV+L+ +L G PF G + +E R+
Sbjct: 184 LGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFD 242
Query: 300 PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
PPD + L++ +L +P+KRI EE H
Sbjct: 243 PPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNH 277
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 21/162 (12%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V LG GA G V L KD + A+K+I KKS T +++G ++ VL
Sbjct: 26 VKKLGSGAYGEVLLCKDKLTGAERAIKII------KKSSVTTTSNSGALLDEVA----VL 75
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS---LRKQQSEQMFSDDTIRFXXXXX 137
+ ++HP + +L + ++ G +L LR Q FS+
Sbjct: 76 KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR-----QKFSEVDAAVIMKQV 130
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQE---NGHIMLVDFDLST 176
H IV+RDLKPEN++++ + I +VDF LS
Sbjct: 131 LSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSA 172
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 134/336 (39%), Gaps = 87/336 (25%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYR-RISFEQR 78
I+ +G G VF V + E + +A+K + + E +N D YR I++ +
Sbjct: 60 ILKQIGSGGSSKVFQVLN-EKKQIYAIKYV--------NLEEADNQTLDSYRNEIAYLNK 110
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFXXXXX 137
+ ++ + + RL TD+++ Y + C DL+S L+K++S + +
Sbjct: 111 LQQHSDKII--RLYDYEITDQYI-YMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNM 164
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
H GIV+ DLKP N +I + G + L+DF ++ ++ P +T S
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP-------------DTTS 210
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
+K + VGT Y+ PE I+
Sbjct: 211 VVKDSQ-----------------------------------------VGTVNYMPPEAIK 229
Query: 258 GKGHD-----------FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE 306
D WSLG +L+ M YG TPF+ + + + P +
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 289
Query: 307 P----TPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
P L+++++ L++DP +RI + E+ H + +
Sbjct: 290 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
+V LG GA G V L + + E+ A+K++ D+ K++ + N I E +
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 57
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
+ + H + + G ++YC G +L R + M D RF
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 116
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H +GI +RD+KPEN+++ E ++ + DF L+ TV N R
Sbjct: 117 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRE-- 160
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
L+K C GT YVAPE+++ +
Sbjct: 161 ----RLLNKMC-----------------------------------GTLPYVAPELLKRR 181
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
H VD WS G+VL ML G P+ S Y + P + + PL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 239
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
L+ ++L ++P+ RI + +IK ++
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWY 264
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
+V LG GA G V L + + E+ A+K++ D+ K++ + N I E +
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 57
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
+ + H + + G ++YC G +L R + M D RF
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 116
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H +GI +RD+KPEN+++ E ++ + DF L+ TV N
Sbjct: 117 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNN---- 158
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
R L+K C GT YVAPE+++ +
Sbjct: 159 --RERLLNKMC-----------------------------------GTLPYVAPELLKRR 181
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
H VD WS G+VL ML G P+ S Y + P + + PL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 239
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
L+ ++L ++P+ RI + +IK ++
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWY 264
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
+V LG GA G V L + + E+ A+K++ D+ K++ + N I E +
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 58
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
+ + H + + G ++YC G +L R + M D RF
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 117
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H +GI +RD+KPEN+++ E ++ + DF L+ TV N R
Sbjct: 118 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRE-- 161
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
L+K C GT YVAPE+++ +
Sbjct: 162 ----RLLNKMC-----------------------------------GTLPYVAPELLKRR 182
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
H VD WS G+VL ML G P+ S Y + P + + PL
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 240
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
L+ ++L ++P+ RI + +IK ++
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWY 265
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
+V LG GA G V L + + E+ A+K++ D+ K++ + N I E +
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 58
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
+ + H + + G ++YC G +L R + M D RF
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 117
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H +GI +RD+KPEN+++ E ++ + DF L+ TV N R
Sbjct: 118 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRE-- 161
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
L+K C GT YVAPE+++ +
Sbjct: 162 ----RLLNKMC-----------------------------------GTLPYVAPELLKRR 182
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
H VD WS G+VL ML G P+ S Y + P + + PL
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 240
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
L+ ++L ++P+ RI + +IK ++
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWY 265
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 122/331 (36%), Gaps = 83/331 (25%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
LG GA G V L + ++ + A+K+I K+ + + D + E +L+
Sbjct: 17 TLGSGACGEVKLAFERKTCKKVAIKII-----SKRKFAIGSAREADPALNVETEIEILKK 71
Query: 83 VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+ HP + +++ + + ++ G +L K + + T +
Sbjct: 72 LNHPCIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 143 XXHNMGIVYRDLKPENIMI---QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H GI++RDLKPEN+++ +E+ I + DF S I
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG----------------------HSKI 166
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG- 258
S + C GT Y+APE++
Sbjct: 167 LGETSLMRTLC-----------------------------------GTPTYLAPEVLVSV 191
Query: 259 --KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF--------YRILCRPPDLVGEPT 308
G++ AVD WSLGV+L L G PF + + Y + P++ E +
Sbjct: 192 GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI---PEVWAEVS 248
Query: 309 -PLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
+L+++LL DP R EE H + +
Sbjct: 249 EKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
+V LG GA G V L + + E+ A+K++ D+ K++ + N I E +
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 58
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
+ + H + + G ++YC G +L R + M D RF
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 117
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H +GI +RD+KPEN+++ E ++ + DF L+ TV N R
Sbjct: 118 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRE-- 161
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
L+K C GT YVAPE+++ +
Sbjct: 162 ----RLLNKMC-----------------------------------GTLPYVAPELLKRR 182
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
H VD WS G+VL ML G P+ S Y + P + + PL
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 240
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
L+ ++L ++P+ RI + +IK ++
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWY 265
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 122/331 (36%), Gaps = 83/331 (25%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
LG GA G V L + ++ + A+K+I K+ + + D + E +L+
Sbjct: 16 TLGSGACGEVKLAFERKTCKKVAIKII-----SKRKFAIGSAREADPALNVETEIEILKK 70
Query: 83 VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+ HP + +++ + + ++ G +L K + + T +
Sbjct: 71 LNHPCIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAVQ 127
Query: 143 XXHNMGIVYRDLKPENIMI---QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H GI++RDLKPEN+++ +E+ I + DF S I
Sbjct: 128 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG----------------------HSKI 165
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG- 258
S + C GT Y+APE++
Sbjct: 166 LGETSLMRTLC-----------------------------------GTPTYLAPEVLVSV 190
Query: 259 --KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF--------YRILCRPPDLVGEPT 308
G++ AVD WSLGV+L L G PF + + Y + P++ E +
Sbjct: 191 GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI---PEVWAEVS 247
Query: 309 -PLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
+L+++LL DP R EE H + +
Sbjct: 248 EKALDLVKKLLVVDPKARFTTEEALRHPWLQ 278
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
+V LG GA G V L + + E+ A+K++ D+ K++ + N I E +
Sbjct: 9 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 56
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
+ + H + + G ++YC G +L R + M D RF
Sbjct: 57 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 115
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H +GI +RD+KPEN+++ E ++ + DF L+ TV N R
Sbjct: 116 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRE-- 159
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
L+K C GT YVAPE+++ +
Sbjct: 160 ----RLLNKMC-----------------------------------GTLPYVAPELLKRR 180
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
H VD WS G+VL ML G P+ S Y + P + + PL
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPL-A 238
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
L+ ++L ++P+ RI + +IK ++
Sbjct: 239 LLHKILVENPSARITIPDIKKDRWY 263
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
+V LG GA G V L + + E+ A+K++ D+ K++ + N I E +
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 57
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
+ + H + + G ++YC G +L R + M D RF
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 116
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H +GI +RD+KPEN+++ E ++ + DF L+ TV N R
Sbjct: 117 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRE-- 160
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
L+K C GT YVAPE+++ +
Sbjct: 161 ----RLLNKMC-----------------------------------GTLPYVAPELLKRR 181
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
H VD WS G+VL ML G P+ S Y + P + + PL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 239
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
L+ ++L ++P+ RI + +IK ++
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWY 264
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
+V LG GA G V L + + E+ A+K++ D+ K++ + N I E +
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 57
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
+ + H + + G ++YC G +L R + M D RF
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 116
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H +GI +RD+KPEN+++ E ++ + DF L+ TV N R
Sbjct: 117 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRE-- 160
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
L+K C GT YVAPE+++ +
Sbjct: 161 ----RLLNKMC-----------------------------------GTLPYVAPELLKRR 181
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
H VD WS G+VL ML G P+ S Y + P + + PL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 239
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
L+ ++L ++P+ RI + +IK ++
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWY 264
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 122/331 (36%), Gaps = 83/331 (25%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
LG GA G V L + ++ + A+K+I K+ + + D + E +L+
Sbjct: 23 TLGSGACGEVKLAFERKTCKKVAIKII-----SKRKFAIGSAREADPALNVETEIEILKK 77
Query: 83 VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+ HP + +++ + + ++ G +L K + + T +
Sbjct: 78 LNHPCIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQ 134
Query: 143 XXHNMGIVYRDLKPENIMI---QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H GI++RDLKPEN+++ +E+ I + DF S I
Sbjct: 135 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG----------------------HSKI 172
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG- 258
S + C GT Y+APE++
Sbjct: 173 LGETSLMRTLC-----------------------------------GTPTYLAPEVLVSV 197
Query: 259 --KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF--------YRILCRPPDLVGEPT 308
G++ AVD WSLGV+L L G PF + + Y + P++ E +
Sbjct: 198 GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI---PEVWAEVS 254
Query: 309 -PLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
+L+++LL DP R EE H + +
Sbjct: 255 EKALDLVKKLLVVDPKARFTTEEALRHPWLQ 285
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 122/331 (36%), Gaps = 83/331 (25%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
LG GA G V L + ++ + A+K+I K+ + + D + E +L+
Sbjct: 17 TLGSGACGEVKLAFERKTCKKVAIKII-----SKRKFAIGSAREADPALNVETEIEILKK 71
Query: 83 VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+ HP + +++ + + ++ G +L K + + T +
Sbjct: 72 LNHPCIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 143 XXHNMGIVYRDLKPENIMI---QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H GI++RDLKPEN+++ +E+ I + DF S I
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG----------------------HSKI 166
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG- 258
S + C GT Y+APE++
Sbjct: 167 LGETSLMRTLC-----------------------------------GTPTYLAPEVLVSV 191
Query: 259 --KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF--------YRILCRPPDLVGEPT 308
G++ AVD WSLGV+L L G PF + + Y + P++ E +
Sbjct: 192 GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI---PEVWAEVS 248
Query: 309 -PLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
+L+++LL DP R EE H + +
Sbjct: 249 EKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
+V LG GA G V L + + E+ A+K++ D+ K++ + N I E +
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 58
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
+ + H + + G ++YC G +L R + M D RF
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 117
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H +GI +RD+KPEN+++ E ++ + DF L+ TV N R
Sbjct: 118 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRE-- 161
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
L+K C GT YVAPE+++ +
Sbjct: 162 ----RLLNKMC-----------------------------------GTLPYVAPELLKRR 182
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
H VD WS G+VL ML G P+ S Y + P + + PL
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 240
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
L+ ++L ++P+ RI + +IK ++
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWY 265
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 122/331 (36%), Gaps = 83/331 (25%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
LG GA G V L + ++ + A+K+I K+ + + D + E +L+
Sbjct: 17 TLGSGACGEVKLAFERKTCKKVAIKII-----SKRKFAIGSAREADPALNVETEIEILKK 71
Query: 83 VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+ HP + +++ + + ++ G +L K + + T +
Sbjct: 72 LNHPCIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 143 XXHNMGIVYRDLKPENIMI---QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H GI++RDLKPEN+++ +E+ I + DF S I
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG----------------------HSKI 166
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG- 258
S + C GT Y+APE++
Sbjct: 167 LGETSLMRTLC-----------------------------------GTPTYLAPEVLVSV 191
Query: 259 --KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF--------YRILCRPPDLVGEPT 308
G++ AVD WSLGV+L L G PF + + Y + P++ E +
Sbjct: 192 GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI---PEVWAEVS 248
Query: 309 -PLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
+L+++LL DP R EE H + +
Sbjct: 249 EKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
+V LG GA G V L + + E+ A+K++ D+ K++ + N I E +
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 57
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
+ + H + + G ++YC G +L R + M D RF
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 116
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H +GI +RD+KPEN+++ E ++ + DF L+ TV N R
Sbjct: 117 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRE-- 160
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
L+K C GT YVAPE+++ +
Sbjct: 161 ----RLLNKMC-----------------------------------GTLPYVAPELLKRR 181
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
H VD WS G+VL ML G P+ S Y + P + + PL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 239
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
L+ ++L ++P+ RI + +IK ++
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWY 264
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
+V LG GA G V L + + E+ A+K++ D+ K++ + N I E +
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 57
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
+ + H + + G ++YC G +L R + M D RF
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 116
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H +GI +RD+KPEN+++ E ++ + DF L+ TV N R
Sbjct: 117 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRE-- 160
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
L+K C GT YVAPE+++ +
Sbjct: 161 ----RLLNKMC-----------------------------------GTLPYVAPELLKRR 181
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
H VD WS G+VL ML G P+ S Y + P + + PL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 239
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
L+ ++L ++P+ RI + +IK ++
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWY 264
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 128/325 (39%), Gaps = 77/325 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
+V LG GA G V L + + E+ A+K++ D+ K++ + N I E +
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 58
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
+ + H + + G ++YC G +L R + M D RF
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 117
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H +GI +RD+KPEN+++ E ++ + DF L+ TV N R
Sbjct: 118 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRE-- 161
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
L+K C GT YVAPE+++ +
Sbjct: 162 ----RLLNKMC-----------------------------------GTLPYVAPELLKRR 182
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
H VD WS G+VL ML G P+ S Y + P + + PL
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 240
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
L+ ++L ++P+ RI + +IK ++
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWY 265
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 85/214 (39%), Gaps = 64/214 (29%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRS 204
H G ++RD+K NI++ E+G + + DF +S L+ TR+ ++K
Sbjct: 138 HKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG----------GDITRNKVRK--- 184
Query: 205 FLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-KGHDF 263
FVGT ++APE++E +G+DF
Sbjct: 185 --------------------------------------TFVGTPCWMAPEVMEQVRGYDF 206
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-PPDL---VGEPTPL-------RN 312
D WS G+ E+ GA P+ + L PP L V + L R
Sbjct: 207 KADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRK 266
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF-KGVNWELL 345
+I L+KDP KR E+ H+FF K N E L
Sbjct: 267 MISLCLQKDPEKRPTAAELLRHKFFQKAKNKEFL 300
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 124/322 (38%), Gaps = 79/322 (24%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
LG G G V + + + A+K++ R +K + L D +I E + L+
Sbjct: 18 TLGVGTFGKVKIGEHQLTGHKVAVKILNR----QKIRSL------DVVGKIKREIQNLKL 67
Query: 83 VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIRFXXXXXXXX 140
HP + +L V+ST ++Y G +L + + + E+M + R
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEA----RRLFQQILSA 123
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H +V+RDLKPEN+++ + + + DF L
Sbjct: 124 VDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGL-------------------------- 157
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKG 260
S S G L D G+ Y APE+I G+
Sbjct: 158 ------SNMMSDGEFLRDSC-------------------------GSPNYAAPEVISGRL 186
Query: 261 HDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRI---LCRPPDLVGEPTPLRNLIRR 316
+ VD WS GV+L+ +L G PF F +I + P+ + L+
Sbjct: 187 YAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVA--TLLMH 244
Query: 317 LLEKDPTKRIGVEEIKGHEFFK 338
+L+ DP KR +++I+ HE+FK
Sbjct: 245 MLQVDPLKRATIKDIREHEWFK 266
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 124/322 (38%), Gaps = 79/322 (24%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
LG G G V + + + A+K++ R +K + L D +I E + L+
Sbjct: 18 TLGVGTFGKVKIGEHQLTGHKVAVKILNR----QKIRSL------DVVGKIKREIQNLKL 67
Query: 83 VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIRFXXXXXXXX 140
HP + +L V+ST ++Y G +L + + + E+M + R
Sbjct: 68 FRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEA----RRLFQQILSA 123
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H +V+RDLKPEN+++ + + + DF L S +
Sbjct: 124 VDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGL----------------------SNMM 161
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKG 260
FL C G+ Y APE+I G+
Sbjct: 162 SDGEFLRTSC-----------------------------------GSPNYAAPEVISGRL 186
Query: 261 HDFA-VDWWSLGVVLHEMLYGATPFRGSSRKETFYRI---LCRPPDLVGEPTPLRNLIRR 316
+ VD WS GV+L+ +L G PF F +I + P+ + L+
Sbjct: 187 YAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVA--TLLMH 244
Query: 317 LLEKDPTKRIGVEEIKGHEFFK 338
+L+ DP KR +++I+ HE+FK
Sbjct: 245 MLQVDPLKRATIKDIREHEWFK 266
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 122/331 (36%), Gaps = 83/331 (25%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
LG GA G V L + ++ + A+++I K+ + + D + E +L+
Sbjct: 156 TLGSGACGEVKLAFERKTCKKVAIRII-----SKRKFAIGSAREADPALNVETEIEILKK 210
Query: 83 VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+ HP + +++ + + ++ G +L K + + T +
Sbjct: 211 LNHPCIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAVQ 267
Query: 143 XXHNMGIVYRDLKPENIMI---QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H GI++RDLKPEN+++ +E+ I + DF S I
Sbjct: 268 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG----------------------HSKI 305
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG- 258
S + C GT Y+APE++
Sbjct: 306 LGETSLMRTLC-----------------------------------GTPTYLAPEVLVSV 330
Query: 259 --KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF--------YRILCRPPDLVGEPT 308
G++ AVD WSLGV+L L G PF + + Y + P++ E +
Sbjct: 331 GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI---PEVWAEVS 387
Query: 309 -PLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
+L+++LL DP R EE H + +
Sbjct: 388 EKALDLVKKLLVVDPKARFTTEEALRHPWLQ 418
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 126/330 (38%), Gaps = 87/330 (26%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVI----WRDLIEKKSKELTNNDNGDKYRRISF 75
+V LG GA G V L + + E+ A+K++ D E KE+ N + + F
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKF 70
Query: 76 E-QRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXX 134
R N+++ L +YC G +L R + M D RF
Sbjct: 71 YGHRREGNIQYLFL-----------------EYCSGGELFD-RIEPDIGMPEPDAQRFFH 112
Query: 135 XXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAAN 194
H +GI +RD+KPEN+++ E ++ + DF L+ TV N
Sbjct: 113 QLMAGVVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYN 158
Query: 195 TRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPE 254
R L+K C GT YVAPE
Sbjct: 159 NRE------RLLNKMC-----------------------------------GTLPYVAPE 177
Query: 255 IIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEP 307
+++ + H VD WS G+VL ML G P+ S Y + P + +
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DS 236
Query: 308 TPLRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
PL L+ ++L ++P+ RI + +IK ++
Sbjct: 237 APLA-LLHKILVENPSARITIPDIKKDRWY 265
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 63/206 (30%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRS 204
H G ++RD+K NI++ E+G + + DF +S L+ TR+ ++K
Sbjct: 133 HKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATG----------GDITRNKVRK--- 179
Query: 205 FLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-KGHDF 263
FVGT ++APE++E +G+DF
Sbjct: 180 --------------------------------------TFVGTPCWMAPEVMEQVRGYDF 201
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-PPDL---VGEPTPL-------RN 312
D WS G+ E+ GA P+ + L PP L V + L R
Sbjct: 202 KADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRK 261
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFFK 338
+I L+KDP KR E+ H+FF+
Sbjct: 262 MISLCLQKDPEKRPTAAELLRHKFFQ 287
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 122/331 (36%), Gaps = 83/331 (25%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
LG GA G V L + ++ + A+++I K+ + + D + E +L+
Sbjct: 142 TLGSGACGEVKLAFERKTCKKVAIRII-----SKRKFAIGSAREADPALNVETEIEILKK 196
Query: 83 VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+ HP + +++ + + ++ G +L K + + T +
Sbjct: 197 LNHPCIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCKLYFYQMLLAVQ 253
Query: 143 XXHNMGIVYRDLKPENIMI---QENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H GI++RDLKPEN+++ +E+ I + DF S I
Sbjct: 254 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG----------------------HSKI 291
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG- 258
S + C GT Y+APE++
Sbjct: 292 LGETSLMRTLC-----------------------------------GTPTYLAPEVLVSV 316
Query: 259 --KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF--------YRILCRPPDLVGEPT 308
G++ AVD WSLGV+L L G PF + + Y + P++ E +
Sbjct: 317 GTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI---PEVWAEVS 373
Query: 309 -PLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
+L+++LL DP R EE H + +
Sbjct: 374 EKALDLVKKLLVVDPKARFTTEEALRHPWLQ 404
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 133/336 (39%), Gaps = 87/336 (25%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYR-RISFEQR 78
I+ +G G VF V + E + +A+K + + E +N D YR I++ +
Sbjct: 60 ILKQIGSGGSSKVFQVLN-EKKQIYAIKYV--------NLEEADNQTLDSYRNEIAYLNK 110
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFXXXXX 137
+ ++ + + RL TD+++ Y + C DL+S L+K++S + +
Sbjct: 111 LQQHSDKII--RLYDYEITDQYI-YMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNM 164
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
H GIV+ DLKP N +I + G + L+DF ++ ++ P +T S
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP-------------DTTS 210
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
+K + VG Y+ PE I+
Sbjct: 211 VVKDSQ-----------------------------------------VGAVNYMPPEAIK 229
Query: 258 GKGHD-----------FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGE 306
D WSLG +L+ M YG TPF+ + + + P +
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 289
Query: 307 P----TPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
P L+++++ L++DP +RI + E+ H + +
Sbjct: 290 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 114/331 (34%), Gaps = 90/331 (27%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S LG G GVVF V S V+ R LI + K N +I E +VL
Sbjct: 30 ISELGAGNGGVVFKVSHKPSG-----LVMARKLIHLEIKPAIRN-------QIIRELQVL 77
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS---EQMFSDDTIRFXXXXX 137
P + G +D + +++ G L + K+ EQ+ +I
Sbjct: 78 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 137
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
I++RD+KP NI++ G I
Sbjct: 138 YLREKHK----IMHRDVKPSNILVNSRGEI------------------------------ 163
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
K C G+S + FVGT Y++PE ++
Sbjct: 164 ----------KLCDFGVSGQ------------------LIDSMANSFVGTRSYMSPERLQ 195
Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP-------- 309
G + D WS+G+ L EM G P S + +L +V EP P
Sbjct: 196 GTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELL---DYIVNEPPPKLPSGVFS 252
Query: 310 --LRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
++ + + L K+P +R ++++ H F K
Sbjct: 253 LEFQDFVNKCLIKNPAERADLKQLMVHAFIK 283
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 102/272 (37%), Gaps = 62/272 (22%)
Query: 72 RISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIR 131
R E ++++++HP + RL + + ++ C G +L + +++F +
Sbjct: 69 RFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGEL--FERVVHKRVFRESDAA 126
Query: 132 FXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
H + + +RDLKPEN + L D SP +P L
Sbjct: 127 RIMKDVLSAVAYCHKLNVAHRDLKPENFLF-------LTD-------SPDSPLKLIDFGL 172
Query: 192 AANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYV 251
AA + G R VGT YV
Sbjct: 173 AARFKPGKMMRTK----------------------------------------VGTPYYV 192
Query: 252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI----LCRP-PDLVGE 306
+P+++EG + D WS GV+++ +L G PF + E +I P D +
Sbjct: 193 SPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNV 251
Query: 307 PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
+LIRRLL K P +RI + HE+F+
Sbjct: 252 SPQAESLIRRLLTKSPKQRITSLQALEHEWFE 283
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 102/272 (37%), Gaps = 62/272 (22%)
Query: 72 RISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIR 131
R E ++++++HP + RL + + ++ C G +L + +++F +
Sbjct: 52 RFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGEL--FERVVHKRVFRESDAA 109
Query: 132 FXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
H + + +RDLKPEN + L D SP +P L
Sbjct: 110 RIMKDVLSAVAYCHKLNVAHRDLKPENFLF-------LTD-------SPDSPLKLIDFGL 155
Query: 192 AANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYV 251
AA + G R VGT YV
Sbjct: 156 AARFKPGKMMRTK----------------------------------------VGTPYYV 175
Query: 252 APEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI----LCRP-PDLVGE 306
+P+++EG + D WS GV+++ +L G PF + E +I P D +
Sbjct: 176 SPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNV 234
Query: 307 PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
+LIRRLL K P +RI + HE+F+
Sbjct: 235 SPQAESLIRRLLTKSPKQRITSLQALEHEWFE 266
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 124/326 (38%), Gaps = 70/326 (21%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELT--------NNDNGDKYRR 72
++ LG+GA G V ++ S +A+K I R EK S L+ N+ +Y
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 73 ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
E+R N P+ + + ++YC L+ L ++ D+ R
Sbjct: 70 AWLERR---NFVKPM-----TAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL 121
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
H+ GI++RDLKP NI I E+ ++ + DF LA
Sbjct: 122 FRQILEALSYI-HSQGIIHRDLKPMNIFIDESRNVKIGDFG-----------------LA 163
Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVA 252
N + + S +L + GT YVA
Sbjct: 164 KNVHRSLDILKLDSQNLPGSSDNLTSAI-------------------------GTAMYVA 198
Query: 253 PEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-----PPDLVGE 306
E+++G GH + +D +SLG++ EM+Y PF + + L PPD
Sbjct: 199 TEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDN 255
Query: 307 PTPL-RNLIRRLLEKDPTKRIGVEEI 331
+ + +IR L++ DP KR G +
Sbjct: 256 KMKVEKKIIRLLIDHDPNKRPGARTL 281
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 10/107 (9%)
Query: 247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGS---SRKETFYRILCRPPDL 303
T +VAPE++E +G+D A D WSLGV+L+ ML G TPF + +E RI L
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSL 242
Query: 304 VG-----EPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELL 345
G ++L+ ++L DP +R+ + H + V+W+ L
Sbjct: 243 SGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI--VHWDQL 287
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 108/289 (37%), Gaps = 68/289 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
+V LG+GA G+V+ D + E A+K I+ D ++ + QR
Sbjct: 13 LVKKLGKGAYGIVWKSIDRRTGEVVAVKKIF-----------------DAFQNSTDAQRT 55
Query: 80 LRNVE-------HPLLPRLRGVL--STDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDT 129
R + H + L VL D+ V DY DLH+ +R E +
Sbjct: 56 FREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRANILEPVHK--- 111
Query: 130 IRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
++ H+ G+++RD+KP NI++ H+ + DF LS
Sbjct: 112 -QYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLS-------------- 156
Query: 190 VLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
RS + RR ++ I L +V T
Sbjct: 157 ------RSFVNIRR------VTNNIPLS---------INENTENFDDDQPILTDYVATRW 195
Query: 250 YVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL 297
Y APEI+ G + +D WSLG +L E+L G F GSS RI+
Sbjct: 196 YRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERII 244
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 115/339 (33%), Gaps = 100/339 (29%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S LG G GVVF V S V+ R LI + K N +I E +VL
Sbjct: 11 ISELGAGNGGVVFKVSHKPSG-----LVMARKLIHLEIKPAIRN-------QIIRELQVL 58
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS---EQMFSDDTIRFXXXXX 137
P + G +D + +++ G L + K+ EQ+ +I
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
I++RD+KP NI++ G I
Sbjct: 119 YLREKHK----IMHRDVKPSNILVNSRGEI------------------------------ 144
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
K C G+S + FVGT Y++PE ++
Sbjct: 145 ----------KLCDFGVSGQ------------------LIDSMANSFVGTRSYMSPERLQ 176
Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP--------DLVGEPTP 309
G + D WS+G+ L EM G P KE RPP +V EP P
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKED-----SRPPMAIFELLDYIVNEPPP 231
Query: 310 ----------LRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
++ + + L K+P +R ++++ H F K
Sbjct: 232 KLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 270
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 126/325 (38%), Gaps = 77/325 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
+V LG GA G V L + + E+ A+K++ D+ K++ + N I E +
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 57
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
+ + H + + G ++YC G +L R + M D RF
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 116
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H +GI +RD+KPEN+++ E ++ + DF L+ TV N R +
Sbjct: 117 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRERL 162
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
+ GT YVAPE+++ +
Sbjct: 163 LNK-----------------------------------------MXGTLPYVAPELLKRR 181
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
H VD WS G+VL ML G P+ S Y + P + + PL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNPWKKI-DSAPLA- 239
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
L+ ++L ++P+ RI + +IK ++
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWY 264
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 130/346 (37%), Gaps = 101/346 (29%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G G GVV+ ++ E+FALK I L D G I E +L+ +
Sbjct: 10 IGEGTYGVVYKAQN-NYGETFALKKI----------RLEKEDEGIPSTTIR-EISILKEL 57
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+H + +L V+ T K + ++ +DL L E T +
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLL-DVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H+ +++RDLKP+N++I G + + DF L+ R
Sbjct: 116 CHDRRVLHRDLKPQNLLINREGELKIADFGLA---------------------------R 148
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-KGHD 262
+F GI + H V T Y AP+++ G K +
Sbjct: 149 AF-------GIPVRKYTHE----------------------VVTLWYRAPDVLMGSKKYS 179
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETF---YRILCRP-----PDL----------- 303
+D WS+G + EM+ GA F G S + +RIL P P++
Sbjct: 180 TTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFT 239
Query: 304 VGEPTPLR-----------NLIRRLLEKDPTKRIGVEEIKGHEFFK 338
V EP P +L+ ++L+ DP +RI ++ H +FK
Sbjct: 240 VYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 126/325 (38%), Gaps = 77/325 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
+V LG GA G V L + + E+ A+K++ D+ K++ + N I E +
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEIXI 57
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
+ + H + + G ++YC G +L R + M D RF
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 116
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H +GI +RD+KPEN+++ E ++ + DF L+ TV N R +
Sbjct: 117 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRERL 162
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
+ GT YVAPE+++ +
Sbjct: 163 LNK-----------------------------------------MXGTLPYVAPELLKRR 181
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
H VD WS G+VL ML G P+ S Y + P + + PL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 239
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
L+ ++L ++P+ RI + +IK ++
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWY 264
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 126/325 (38%), Gaps = 77/325 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
+V LG GA G V L + + E+ A+K++ D+ K++ + N I E +
Sbjct: 11 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEIXI 58
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
+ + H + + G ++YC G +L R + M D RF
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 117
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H +GI +RD+KPEN+++ E ++ + DF L+ TV N R +
Sbjct: 118 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRERL 163
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
+ GT YVAPE+++ +
Sbjct: 164 LNK-----------------------------------------MXGTLPYVAPELLKRR 182
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
H VD WS G+VL ML G P+ S Y + P + + PL
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 240
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
L+ ++L ++P+ RI + +IK ++
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWY 265
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 122/336 (36%), Gaps = 78/336 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
I+ LG GA GVV + + F K I DKY + E +
Sbjct: 55 ILEELGSGAFGVVHRCVEKATGRVFVAKFI------------NTPYPLDKYT-VKNEISI 101
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
+ + HP L L + +++ G +L + +M + I +
Sbjct: 102 MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEG 161
Query: 140 XXXXXHNMGIVYRDLKPENIMIQ--ENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
H IV+ D+KPENIM + + + ++DF L+TKL+P
Sbjct: 162 LKHM-HEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE--------------- 205
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
I K + ++F + I +PV
Sbjct: 206 -IVKVTTATAEFAAPEIVDREPV------------------------------------- 227
Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-LCR---PPDLVGEPTP-LRN 312
F D W++GV+ + +L G +PF G ET + C D +P ++
Sbjct: 228 ----GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKD 283
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKI 348
I+ LL+K+P KR+ V + H + KG + L +I
Sbjct: 284 FIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRI 319
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 126/340 (37%), Gaps = 79/340 (23%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGD-KYRRISFEQRV 79
+S LG GA G V+ D E ++ +K I KK K L + D K +++ E +
Sbjct: 29 MSPLGSGAFGFVWTAVDKEKNKEVVVKFI------KKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAID-YCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
L VEH + ++ + F ++ + G DL + + + +
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR--LDEPLASYIFRQLV 140
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
I++RD+K ENI+I E+ I L+DF + L
Sbjct: 141 SAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL-------------------- 180
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
+R FC GT EY APE++ G
Sbjct: 181 --ERGKLFYTFC-----------------------------------GTIEYCAPEVLMG 203
Query: 259 KGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRL 317
+ ++ WSLGV L+ +++ PF E PP LV + L +L+ L
Sbjct: 204 NPYRGPELEMWSLGVTLYTLVFEENPF---CELEETVEAAIHPPYLVSK--ELMSLVSGL 258
Query: 318 LEKDPTKRIGVEEIKGHEF------FKGVNWELLLKISRP 351
L+ P +R +E++ + WE + ++++P
Sbjct: 259 LQPVPERRTTLEKLVTDPWVTQPVNLADYTWEEVFRVNKP 298
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 11/156 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G G+ G LVK E + +K I + K +E + RR E VL N+
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREES--------RR---EVAVLANM 80
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+HP + + R + + +DYC G DL Q +F +D I
Sbjct: 81 KHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKH 140
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
H+ I++RD+K +NI + ++G + L DF ++ L+
Sbjct: 141 VHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN 176
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR--PPD 302
+GT Y++PEI E K ++ D W+LG VL+E+ F S K +I+ PP
Sbjct: 186 IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPV 245
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
+ LR+L+ +L +++P R V I
Sbjct: 246 SLHYSYDLRSLVSQLFKRNPRDRPSVNSI 274
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 121/327 (37%), Gaps = 77/327 (23%)
Query: 19 RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
++ LG+GA VV V + + +A +I +K+L+ D ++++ E R
Sbjct: 14 QLFEELGKGAFSVVRRCVKVLAGQEYAAMII-------NTKKLSARD----HQKLEREAR 62
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
+ R ++HP + RL +S + D G +L + + +S+
Sbjct: 63 ICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL--FEDIVAREYYSEADASHCIQQIL 120
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
H MG+V+R+LK P+ +L A+ G
Sbjct: 121 EAVLHCHQMGVVHRNLK-------------------------------PENLLLASKLKG 149
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG 258
K G+++E F GT Y++PE++
Sbjct: 150 AA------VKLADFGLAIE----------------VEGEQQAWFGFAGTPGYLSPEVLRK 187
Query: 259 KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP--------L 310
+ VD W+ GV+L+ +L G PF + + +I D P+P
Sbjct: 188 DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF---PSPEWDTVTPEA 244
Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEFF 337
++LI ++L +P+KRI E H +
Sbjct: 245 KDLINKMLTINPSKRITAAEALKHPWI 271
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 126/325 (38%), Gaps = 77/325 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
+V LG GA G V L + + E+ A+K++ D+ K++ + N I E +
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 57
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
+ + H + + G ++YC G +L R + M D RF
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 116
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H +GI +RD+KPEN+++ E ++ + DF L+ TV N R +
Sbjct: 117 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRERL 162
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
+ GT YVAPE+++ +
Sbjct: 163 LNK-----------------------------------------MXGTLPYVAPELLKRR 181
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
H VD WS G+VL ML G P+ S Y + P + + PL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPL-A 239
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
L+ ++L ++P+ RI + +IK ++
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWY 264
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 126/325 (38%), Gaps = 77/325 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
+V LG GA G V L + + E+ A+K++ D+ K++ + N I E +
Sbjct: 10 LVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DM--KRAVDCPEN--------IKKEICI 57
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
+ + H + + G ++YC G +L R + M D RF
Sbjct: 58 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD-RIEPDIGMPEPDAQRFFHQLMAG 116
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H +GI +RD+KPEN+++ E ++ + DF L+ TV N R +
Sbjct: 117 VVYL-HGIGITHRDIKPENLLLDERDNLKISDFGLA-------------TVFRYNNRERL 162
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
+ GT YVAPE+++ +
Sbjct: 163 LNK-----------------------------------------MXGTLPYVAPELLKRR 181
Query: 260 G-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY------RILCRPPDLVGEPTPLRN 312
H VD WS G+VL ML G P+ S Y + P + + PL
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKI-DSAPLA- 239
Query: 313 LIRRLLEKDPTKRIGVEEIKGHEFF 337
L+ ++L ++P+ RI + +IK ++
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWY 264
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 122/331 (36%), Gaps = 80/331 (24%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
++ LG+GA G V ++ S +A+K I R EK S L+ E +L
Sbjct: 11 IAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILS-------------EVXLL 56
Query: 81 RNVEHPLLPRLRGV-LSTDKFVG------------YAIDYCPGRDLHSLRKQQSEQMFSD 127
++ H + R L FV +YC R L+ L ++ D
Sbjct: 57 ASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRD 116
Query: 128 DTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASP 187
+ R H+ GI++R+LKP NI I E+ ++ + DF
Sbjct: 117 EYWRLFRQILEALSYI-HSQGIIHRNLKPXNIFIDESRNVKIGDFG-------------- 161
Query: 188 KTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGT 247
LA N + + S +L + GT
Sbjct: 162 ---LAKNVHRSLDILKLDSQNLPGSSDNLTSAI-------------------------GT 193
Query: 248 EEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-----PP 301
YVA E+++G GH + +D +SLG++ E +Y PF + + L PP
Sbjct: 194 AXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVNILKKLRSVSIEFPP 250
Query: 302 DLVGEPTPL-RNLIRRLLEKDPTKRIGVEEI 331
D + + +IR L++ DP KR G +
Sbjct: 251 DFDDNKXKVEKKIIRLLIDHDPNKRPGARTL 281
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 107/295 (36%), Gaps = 81/295 (27%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNG---DKYRRISFEQ 77
V+ +G GA G V+ +D S ALK S + N + G R ++ +
Sbjct: 9 VAEIGVGAYGTVYKARDPHSGHFVALK----------SVRVPNGEEGLPISTVREVALLR 58
Query: 78 RVLRNVEHPLLPRLRGVLSTDKF-----VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
R L EHP + RL V +T + V ++ +DL + + +TI+
Sbjct: 59 R-LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKD 116
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLA 192
H IV+RDLKPENI++ G + L DF
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFG------------------- 157
Query: 193 ANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVA 252
L++ S ++L DPV V T Y A
Sbjct: 158 -------------LARIYSYQMAL-DPV------------------------VVTLWYRA 179
Query: 253 PEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP 307
PE++ + VD WS+G + EM F G+S + +I DL+G P
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIF----DLIGLP 230
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 25/188 (13%)
Query: 15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRIS 74
FS LR +G G+ G V+ +DV +SE A+K + + + +K++ I
Sbjct: 56 FSDLR---EIGHGSFGAVYFARDVRNSEVVAIKKM----------SYSGKQSNEKWQDII 102
Query: 75 FEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGR--DLHSLRKQQSEQMFSDDTIRF 132
E R L+ + HP + RG + ++YC G DL + K+ +++ I
Sbjct: 103 KEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEV----EIAA 158
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPK-----TPQ-AS 186
H+ +++RD+K NI++ E G + L DF ++ ++P TP +
Sbjct: 159 VTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMA 218
Query: 187 PKTVLAAN 194
P+ +LA +
Sbjct: 219 PEVILAMD 226
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 58/141 (41%), Gaps = 24/141 (17%)
Query: 244 FVGTEEYVAPEII----EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC- 298
FVGT ++APE+I EG+ +D VD WSLG+ E+ P + Y I
Sbjct: 210 FVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN 268
Query: 299 -RPPDLVGEPTP-LRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPA 356
P G + RN + L+K P R E + H F +L+ RPP +
Sbjct: 269 ESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF--------VLR-ERPPTVIM 319
Query: 357 RFEHENNESDGRGRDGTKEID 377
R +D +E+D
Sbjct: 320 DLIQ-------RTKDAVRELD 333
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 86/188 (45%), Gaps = 25/188 (13%)
Query: 15 FSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRIS 74
FS LR +G G+ G V+ +DV +SE A+K + + + +K++ I
Sbjct: 17 FSDLR---EIGHGSFGAVYFARDVRNSEVVAIKKM----------SYSGKQSNEKWQDII 63
Query: 75 FEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGR--DLHSLRKQQSEQMFSDDTIRF 132
E R L+ + HP + RG + ++YC G DL + K+ +++ I
Sbjct: 64 KEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEV----EIAA 119
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPK-----TPQ-AS 186
H+ +++RD+K NI++ E G + L DF ++ ++P TP +
Sbjct: 120 VTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMA 179
Query: 187 PKTVLAAN 194
P+ +LA +
Sbjct: 180 PEVILAMD 187
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 58/141 (41%), Gaps = 24/141 (17%)
Query: 244 FVGTEEYVAPEII----EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC- 298
FVGT ++APE+I EG+ +D VD WSLG+ E+ P + Y I
Sbjct: 171 FVGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN 229
Query: 299 -RPPDLVGEPTP-LRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPA 356
P G + RN + L+K P R E + H F +L+ RPP +
Sbjct: 230 ESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF--------VLR-ERPPTVIM 280
Query: 357 RFEHENNESDGRGRDGTKEID 377
R +D +E+D
Sbjct: 281 DLIQ-------RTKDAVRELD 294
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 130/349 (37%), Gaps = 101/349 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+ +G G GVV+ ++ E+FALK I L D G I E +L
Sbjct: 7 LEKIGEGTYGVVYKAQN-NYGETFALKKI----------RLEKEDEGIPSTTIR-EISIL 54
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ ++H + +L V+ T K + ++ +DL L E T +
Sbjct: 55 KELKHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLL-DVCEGGLESVTAKSFLLQLLNG 112
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I G + + DF L+
Sbjct: 113 IAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA------------------------- 147
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
R+F GI + H V T Y AP+++ G K
Sbjct: 148 --RAF-------GIPVRKYTHE----------------------VVTLWYRAPDVLMGSK 176
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF---YRILCRP-----PDL-------- 303
+ +D WS+G + EM+ G F G S + +RIL P P++
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236
Query: 304 ---VGEPTPLR-----------NLIRRLLEKDPTKRIGVEEIKGHEFFK 338
V EP P +L+ ++L+ DP +RI ++ H +FK
Sbjct: 237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/331 (19%), Positives = 129/331 (38%), Gaps = 79/331 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIE-KKSKELTNNDNGDKYRRISFEQR 78
+ +G+G VV + E+ + FA+K++ D+ + S L+ D + E
Sbjct: 30 LCEVIGKGPFSVVRRCINRETGQQFAVKIV--DVAKFTSSPGLSTED-------LKREAS 80
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIRFXXXX 136
+ ++HP + L S+D + ++ G DL +++ + ++S+
Sbjct: 81 ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 140
Query: 137 XXXXXXXXHNMGIVYRDLKPENIMI---QENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
H+ I++RD+KP +++ + + + L F ++ +L ++ L A
Sbjct: 141 ILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG--------ESGLVA 192
Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAP 253
R G T ++AP
Sbjct: 193 GGRVG------------------------------------------------TPHFMAP 204
Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK------ETFYRILCRPPDLVGEP 307
E+++ + + VD W GV+L +L G PF G+ + + Y++ R + E
Sbjct: 205 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISES 264
Query: 308 TPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
++L+RR+L DP +RI V E H + K
Sbjct: 265 A--KDLVRRMLMLDPAERITVYEALNHPWLK 293
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 130/349 (37%), Gaps = 101/349 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+ +G G GVV+ ++ E+FALK I L D G I E +L
Sbjct: 7 LEKIGEGTYGVVYKAQN-NYGETFALKKI----------RLEKEDEGIPSTTIR-EISIL 54
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ ++H + +L V+ T K + ++ +DL L E T +
Sbjct: 55 KELKHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLL-DVCEGGLESVTAKSFLLQLLNG 112
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I G + + DF L+
Sbjct: 113 IAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA------------------------- 147
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
R+F GI + H + T Y AP+++ G K
Sbjct: 148 --RAF-------GIPVRKYTHE----------------------IVTLWYRAPDVLMGSK 176
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF---YRILCRP-----PDL-------- 303
+ +D WS+G + EM+ G F G S + +RIL P P++
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236
Query: 304 ---VGEPTPLR-----------NLIRRLLEKDPTKRIGVEEIKGHEFFK 338
V EP P +L+ ++L+ DP +RI ++ H +FK
Sbjct: 237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-----LCR 299
+GT Y+APE++ G +D D WS GV+L+ +L G PF G++ + ++
Sbjct: 189 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 247
Query: 300 PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWE 343
P ++LIR++L P+ RI + HE+ + E
Sbjct: 248 LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKE 291
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 15/157 (9%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
LG+G+ G V L KD + + A+KVI + +++K+ DK + E ++L+
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKT---------DKESLLR-EVQLLKQ 82
Query: 83 VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
++HP + +L + + G +L + S + FS+
Sbjct: 83 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGIT 140
Query: 143 XXHNMGIVYRDLKPENIMIQ---ENGHIMLVDFDLST 176
H IV+RDLKPEN++++ ++ +I ++DF LST
Sbjct: 141 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST 177
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/331 (19%), Positives = 129/331 (38%), Gaps = 79/331 (23%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIE-KKSKELTNNDNGDKYRRISFEQR 78
+ +G+G VV + E+ + FA+K++ D+ + S L+ D + E
Sbjct: 28 LCEVIGKGPFSVVRRCINRETGQQFAVKIV--DVAKFTSSPGLSTED-------LKREAS 78
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--HSLRKQQSEQMFSDDTIRFXXXX 136
+ ++HP + L S+D + ++ G DL +++ + ++S+
Sbjct: 79 ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138
Query: 137 XXXXXXXXHNMGIVYRDLKPENIMI---QENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
H+ I++RD+KP +++ + + + L F ++ +L ++ L A
Sbjct: 139 ILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG--------ESGLVA 190
Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAP 253
R G T ++AP
Sbjct: 191 GGRVG------------------------------------------------TPHFMAP 202
Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK------ETFYRILCRPPDLVGEP 307
E+++ + + VD W GV+L +L G PF G+ + + Y++ R + E
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISES 262
Query: 308 TPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
++L+RR+L DP +RI V E H + K
Sbjct: 263 A--KDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 124/365 (33%), Gaps = 107/365 (29%)
Query: 16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISF 75
S ++ S LG GA GVV + E A+K I E K L R
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-----EPFDKPLFA-------LRTLR 58
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVG----YAIDYCPGRDLHSLRKQQSEQMFSDDTIR 131
E ++L++ +H + + + D F Y I DLH + S QM SDD I+
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQ 115
Query: 132 FXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
+ H +++RDLKP N++I N + + DF L+ + S T
Sbjct: 116 YFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT-- 173
Query: 192 AANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYV 251
+SG+ + FV T Y
Sbjct: 174 --GQQSGMVE------------------------------------------FVATRWYR 189
Query: 252 APEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP--- 307
APE+ + + A+D WS G +L E+ F G + I ++G P
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIF----GIIGTPHSD 245
Query: 308 -----------------------TPLR-----------NLIRRLLEKDPTKRIGVEEIKG 333
PL +L++R+L DP KRI +E
Sbjct: 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305
Query: 334 HEFFK 338
H + +
Sbjct: 306 HPYLQ 310
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-----CRPP 301
T Y APE++ G+D + D WSLGV+L+ ML G PF+ R T + +
Sbjct: 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG 231
Query: 302 DLVGEPTPLRN-------LIRRLLEKDPTKRIGVEEIKGHEFFK 338
D E +N LI+ LL DP KR+ + ++ +E+ +
Sbjct: 232 DFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQ 275
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G+ + +S+++FA+K+I + + KE+T L+
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEIT----------------ALKLC 62
Query: 84 E-HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
E HP + +L V ++ G +L + + ++ FS+ +
Sbjct: 63 EGHPNIVKLHEVFHDQLHTFLVMELLNGGEL--FERIKKKKHFSETEASYIMRKLVSAVS 120
Query: 143 XXHNMGIVYRDLKPENIMI---QENGHIMLVDFDLSTKLSPKTPQ 184
H++G+V+RDLKPEN++ +N I ++DF + +L P Q
Sbjct: 121 HMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFA-RLKPPDNQ 164
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-----LCR 299
+GT Y+APE++ G +D D WS GV+L+ +L G PF G++ + ++
Sbjct: 212 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 270
Query: 300 PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
P ++LIR++L P+ RI + HE+ +
Sbjct: 271 LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 309
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 15/156 (9%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G+ G V L KD + + A+KVI + +++K+ DK + E ++L+ +
Sbjct: 57 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKT---------DKESLLR-EVQLLKQL 106
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+HP + +L + + G +L + S + FS+
Sbjct: 107 DHPNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGITY 164
Query: 144 XHNMGIVYRDLKPENIMIQ---ENGHIMLVDFDLST 176
H IV+RDLKPEN++++ ++ +I ++DF LST
Sbjct: 165 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST 200
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 110/294 (37%), Gaps = 78/294 (26%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V+ +G GA G VF +D+++ F + K + + G I E VL
Sbjct: 16 VAEIGEGAYGKVFKARDLKNGGRF---------VALKRVRVQTGEEGMPLSTIR-EVAVL 65
Query: 81 RNVE---HPLLPRLRGVLS---TDKFVGYAIDY-CPGRDLHSLRKQQSEQMFSDDTIRFX 133
R++E HP + RL V + TD+ + + +DL + + E +TI+
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
H+ +V+RDLKP+NI++ +G I L DF
Sbjct: 126 MFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADF--------------------- 164
Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAP 253
G+ + SF S ++L Y AP
Sbjct: 165 ----GLARIYSFQMALTSVVVTL--------------------------------WYRAP 188
Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP 307
E++ + VD WS+G + EM FRGSS + +IL D++G P
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL----DVIGLP 238
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-----LCR 299
+GT Y+APE++ G +D D WS GV+L+ +L G PF G++ + ++
Sbjct: 213 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 271
Query: 300 PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
P ++LIR++L P+ RI + HE+ +
Sbjct: 272 LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 310
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 15/156 (9%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG+G+ G V L KD + + A+KVI + +++K+ DK + E ++L+ +
Sbjct: 58 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKT---------DKESLLR-EVQLLKQL 107
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+HP + +L + + G +L + S + FS+
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGITY 165
Query: 144 XHNMGIVYRDLKPENIMIQ---ENGHIMLVDFDLST 176
H IV+RDLKPEN++++ ++ +I ++DF LST
Sbjct: 166 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST 201
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
GT Y++PEI H D WSLG + + +L G PF + K T +++ ++
Sbjct: 172 LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEM 231
Query: 304 VGEPTPL----RNLIRRLLEKDPTKRIGVEEIKGHEFF 337
P+ L ++LI +LL ++P R+ + + H F
Sbjct: 232 ---PSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFM 266
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 77/173 (44%), Gaps = 13/173 (7%)
Query: 18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
++ + LG+G+ V+ + + + A+K+I + + K +R+ E
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK----------AGMVQRVQNEV 62
Query: 78 RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXX 137
++ ++HP + L +V ++ C +++ K + + FS++ R
Sbjct: 63 KIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKP-FSENEARHFMHQI 121
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
H+ GI++RDL N+++ N +I + DF L+T+L K P T+
Sbjct: 122 ITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQL--KMPHEKHYTL 172
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-LCRPPD 302
FVGT ++APE+I+ +DF D WSLG+ E+ G P + I PP
Sbjct: 176 FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPT 235
Query: 303 LVGEPT-PLRNLIRRLLEKDPTKRIGVEEIKGHEF 336
L G+ + P + + L KDP R +E+ H+F
Sbjct: 236 LEGQHSKPFKEFVEACLNKDPRFRPTAKELLKHKF 270
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 17/157 (10%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G+G+ G V+ D + E A+K+I DL E + + E VL
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKII--DLEEAEDEIEDIQQ----------EITVLSQC 74
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPG-RDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+ P + R G + ++Y G L L+ E+ + +R
Sbjct: 75 DSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILR----EILKGLD 130
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
H+ ++RD+K N+++ E G + L DF ++ +L+
Sbjct: 131 YLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLT 167
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVG 305
GT E++APE++ F D WS+GV+ + +L G +PF G + ET IL DL
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLED 309
Query: 306 E-----PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
E + I +LL K+ + RI E H +
Sbjct: 310 EEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWL 346
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E V+ ++H L +L + + ++Y G +L +S + DTI F
Sbjct: 136 EISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQ 195
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMI--QENGHIMLVDFDLSTKLSPK 181
H M I++ DLKPENI+ ++ I ++DF L+ + P+
Sbjct: 196 ICEGIRHM-HQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR 242
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 57
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + I+
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKPEN++I NT IK
Sbjct: 117 LAFCHSHRVLHRDLKPENLLI--------------------------------NTEGAIK 144
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
L++ + G+ + H V T Y APEI+ G K
Sbjct: 145 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 180
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 110/294 (37%), Gaps = 78/294 (26%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V+ +G GA G VF +D+++ F + K + + G I E VL
Sbjct: 16 VAEIGEGAYGKVFKARDLKNGGRF---------VALKRVRVQTGEEGMPLSTIR-EVAVL 65
Query: 81 RNVE---HPLLPRLRGVLS---TDKFVGYAIDY-CPGRDLHSLRKQQSEQMFSDDTIRFX 133
R++E HP + RL V + TD+ + + +DL + + E +TI+
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
H+ +V+RDLKP+NI++ +G I L DF
Sbjct: 126 MFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADF--------------------- 164
Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAP 253
G+ + SF S ++L Y AP
Sbjct: 165 ----GLARIYSFQMALTSVVVTLW--------------------------------YRAP 188
Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP 307
E++ + VD WS+G + EM FRGSS + +IL D++G P
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL----DVIGLP 238
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 58
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + I+
Sbjct: 59 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKPEN++I NT IK
Sbjct: 118 LAFCHSHRVLHRDLKPENLLI--------------------------------NTEGAIK 145
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
L++ + G+ + H V T Y APEI+ G K
Sbjct: 146 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 181
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 110/294 (37%), Gaps = 78/294 (26%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V+ +G GA G VF +D+++ F + K + + G I E VL
Sbjct: 16 VAEIGEGAYGKVFKARDLKNGGRF---------VALKRVRVQTGEEGMPLSTIR-EVAVL 65
Query: 81 RNVE---HPLLPRLRGVLS---TDKFVGYAIDY-CPGRDLHSLRKQQSEQMFSDDTIRFX 133
R++E HP + RL V + TD+ + + +DL + + E +TI+
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA 193
H+ +V+RDLKP+NI++ +G I L DF
Sbjct: 126 MFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADF--------------------- 164
Query: 194 NTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAP 253
G+ + SF S ++L Y AP
Sbjct: 165 ----GLARIYSFQMALTSVVVTL--------------------------------WYRAP 188
Query: 254 EIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP 307
E++ + VD WS+G + EM FRGSS + +IL D++G P
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL----DVIGLP 238
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/330 (20%), Positives = 116/330 (35%), Gaps = 85/330 (25%)
Query: 10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDK 69
+ +D+ + + +GRGA GVV K WR K + ++ +
Sbjct: 2 LHMIDYKEIEVEEVVGRGAFGVV-------------CKAKWR----AKDVAIKQIESESE 44
Query: 70 YRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDD 128
+ E R L V HP + +L G V ++Y G L++ L + ++
Sbjct: 45 RKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAA 102
Query: 129 TIRFXXXXXXXXXXXXHNM---GIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
H+M +++RDLKP N+++ G ++
Sbjct: 103 HAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVL----------------- 145
Query: 186 SPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFV 245
K C G + + H
Sbjct: 146 ----------------------KICDFGTACDIQTHMTNNK------------------- 164
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR--GSSRKETFYRIL--CRPP 301
G+ ++APE+ EG + D +S G++L E++ PF G + + RPP
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP 224
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
+ P P+ +L+ R KDP++R +EEI
Sbjct: 225 LIKNLPKPIESLMTRCWSKDPSQRPSMEEI 254
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 56
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + I+
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKPEN++I NT IK
Sbjct: 116 LAFCHSHRVLHRDLKPENLLI--------------------------------NTEGAIK 143
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
L++ + G+ + H V T Y APEI+ G K
Sbjct: 144 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 179
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-LCRPPD 302
FVGT ++APE+I+ +D D WSLG+ E+ G P + I PP
Sbjct: 180 FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPT 239
Query: 303 LVGEPT-PLRNLIRRLLEKDPTKRIGVEEIKGHEF 336
LVG+ T + I L KDP+ R +E+ H+F
Sbjct: 240 LVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKF 274
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 122/352 (34%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 59
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ DL + I+
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKPEN++I NT IK
Sbjct: 119 LAFCHSHRVLHRDLKPENLLI--------------------------------NTEGAIK 146
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
L++ + G+ + H V T Y APEI+ G K
Sbjct: 147 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 182
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 122/352 (34%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 57
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ DL + I+
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKPEN++I NT IK
Sbjct: 117 LAFCHSHRVLHRDLKPENLLI--------------------------------NTEGAIK 144
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
L++ + G+ + H V T Y APEI+ G K
Sbjct: 145 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 180
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/330 (20%), Positives = 116/330 (35%), Gaps = 85/330 (25%)
Query: 10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDK 69
+ +D+ + + +GRGA GVV K WR K + ++ +
Sbjct: 3 LHMIDYKEIEVEEVVGRGAFGVV-------------CKAKWR----AKDVAIKQIESESE 45
Query: 70 YRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDD 128
+ E R L V HP + +L G V ++Y G L++ L + ++
Sbjct: 46 RKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAA 103
Query: 129 TIRFXXXXXXXXXXXXHNM---GIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
H+M +++RDLKP N+++ G ++
Sbjct: 104 HAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVL----------------- 146
Query: 186 SPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFV 245
K C G + + H
Sbjct: 147 ----------------------KICDFGTACDIQTHMTNNK------------------- 165
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR--GSSRKETFYRIL--CRPP 301
G+ ++APE+ EG + D +S G++L E++ PF G + + RPP
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP 225
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
+ P P+ +L+ R KDP++R +EEI
Sbjct: 226 LIKNLPKPIESLMTRCWSKDPSQRPSMEEI 255
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 124/365 (33%), Gaps = 107/365 (29%)
Query: 16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISF 75
S ++ S LG GA GVV + E A+K I E K L R
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-----EPFDKPLFA-------LRTLR 58
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVG----YAIDYCPGRDLHSLRKQQSEQMFSDDTIR 131
E ++L++ +H + + + D F Y I DLH + S QM SDD I+
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQ 115
Query: 132 FXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
+ H +++RDLKP N++I N + + DF L+ + S T
Sbjct: 116 YFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT-- 173
Query: 192 AANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYV 251
+SG+ + +V T Y
Sbjct: 174 --GQQSGMTE------------------------------------------YVATRWYR 189
Query: 252 APEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP--- 307
APE+ + + A+D WS G +L E+ F G + I ++G P
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIF----GIIGTPHSD 245
Query: 308 -----------------------TPLR-----------NLIRRLLEKDPTKRIGVEEIKG 333
PL +L++R+L DP KRI +E
Sbjct: 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305
Query: 334 HEFFK 338
H + +
Sbjct: 306 HPYLQ 310
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 104/279 (37%), Gaps = 72/279 (25%)
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
+LR +HP + L+ V K+V + G +L L K ++ FS+
Sbjct: 69 LLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGEL--LDKILRQKFFSEREASAVLFTIT 126
Query: 139 XXXXXXHNMGIVYRDLKPENIM-IQENGH---IMLVDFDLSTKLSPKTPQASPKTVLAAN 194
H G+V+RDLKP NI+ + E+G+ I + DF + +L
Sbjct: 127 KTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL---------------- 170
Query: 195 TRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPE 254
+ L C + FV E
Sbjct: 171 -----RAENGLLXTPCYTA-----------------------------NFVAPE------ 190
Query: 255 IIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGS---SRKETFYRILCRPPDLVGE----- 306
++E +G+D A D WSLGV+L+ L G TPF + +E RI L G
Sbjct: 191 VLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSV 250
Query: 307 PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELL 345
++L+ + L DP +R+ + H + V+W+ L
Sbjct: 251 SDTAKDLVSKXLHVDPHQRLTAALVLRHPWI--VHWDQL 287
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 124/352 (35%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 59
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + + I+
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I NT IK
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 146
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
L++ + G+ + H V T Y APEI+ G K
Sbjct: 147 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 182
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/359 (20%), Positives = 127/359 (35%), Gaps = 110/359 (30%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G G GVV+ KD + ++ K L D G I E +L+ +
Sbjct: 29 VGEGTYGVVYKAKDSQGR-----------IVALKRIRLDAEDEGIPSTAIR-EISLLKEL 76
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + L V+ +++ + ++ +DL + + + D I+
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGL-QDSQIKIYLYQLLRGVAH 134
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H I++RDLKP+N++I +G + L DF L+ R
Sbjct: 135 CHQHRILHRDLKPQNLLINSDGALKLADFGLA---------------------------R 167
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-KGHD 262
+F GI + H V T Y AP+++ G K +
Sbjct: 168 AF-------GIPVRSYTHE----------------------VVTLWYRAPDVLMGSKKYS 198
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLR----------- 311
+VD WS+G + EM+ G F G + + +I ++G P P
Sbjct: 199 TSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIF----SILGTPNPREWPQVQELPLWK 254
Query: 312 ------------------------NLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLL 346
+L+ +L DP KRI + H +FK ++ ++++
Sbjct: 255 QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLDPQIMI 313
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-----LCR 299
+GT Y+APE++ G +D D WS GV+L+ +L G PF G++ + ++
Sbjct: 195 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 253
Query: 300 PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
P ++LIR++L P+ RI + HE+ +
Sbjct: 254 LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 292
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 15/157 (9%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
LG+G+ G V L KD + + A+KVI + +++K+ DK + E ++L+
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKT---------DK-ESLLREVQLLKQ 88
Query: 83 VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
++HP + +L + + G +L + S + FS+
Sbjct: 89 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGIT 146
Query: 143 XXHNMGIVYRDLKPENIMIQ---ENGHIMLVDFDLST 176
H IV+RDLKPEN++++ ++ +I ++DF LST
Sbjct: 147 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST 183
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 116/324 (35%), Gaps = 80/324 (24%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S LG G GVVF V S V+ R LI + K N +I E +VL
Sbjct: 14 ISELGAGNGGVVFKVSHKPSG-----LVMARKLIHLEIKPAIRN-------QIIRELQVL 61
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS---EQMFSDDTIRFXXXXX 137
P + G +D + +++ G L + K+ EQ+ +I
Sbjct: 62 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 121
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
I++RD+KP NI++ N+R
Sbjct: 122 YLREKHK----IMHRDVKPSNILV--------------------------------NSRG 145
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
IK L F SG +++ FVGT Y++PE ++
Sbjct: 146 EIK-----LCDFGVSGQLIDE---------------------MANEFVGTRSYMSPERLQ 179
Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT---PLRNLI 314
G + D WS+G+ L EM G P + E I+ PP + ++ +
Sbjct: 180 GTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFV 239
Query: 315 RRLLEKDPTKRIGVEEIKGHEFFK 338
+ L K+P +R ++++ H F K
Sbjct: 240 NKCLIKNPAERADLKQLMVHAFIK 263
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 141/387 (36%), Gaps = 99/387 (25%)
Query: 2 NDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL 61
N +++D + S LG G G V + + + E FALK++ ++ EL
Sbjct: 11 NAIIDDYKVTS---------QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL 61
Query: 62 TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS 121
+ R S ++R V+ + + K + ++ G +L S + +
Sbjct: 62 --------HWRASQCPHIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDRG 108
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQE---NGHIMLVDFDLSTKL 178
+Q F++ H++ I +RD+KPEN++ N + L DF +
Sbjct: 109 DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA--- 165
Query: 179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXX 238
K +S SL +P +
Sbjct: 166 -----------------------------KETTSHNSLTEPCY----------------- 179
Query: 239 XXXXXFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---------GSSR 289
T YVAPE++ + +D + D WSLGV+++ +L G PF G
Sbjct: 180 --------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 231
Query: 290 KETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKIS 349
+ + P+ ++ LIR LL+ +PT+R+ + E H + +++ +
Sbjct: 232 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW--------IMQST 283
Query: 350 RPPNIPARFEHENNESDGRGRDGTKEI 376
+ P P E R D +E+
Sbjct: 284 KVPQTPLHTSRVLKEDKERWEDVKEEM 310
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-----LCR 299
+GT Y+APE++ G +D D WS GV+L+ +L G PF G++ + ++
Sbjct: 189 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 247
Query: 300 PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWE 343
P ++LIR+ L P+ RI + HE+ + E
Sbjct: 248 LPQWKKVSESAKDLIRKXLTYVPSXRISARDALDHEWIQTYTKE 291
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 15/157 (9%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
LG+G+ G V L KD + + A+KVI + +++K+ + + E ++L+
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDK----------ESLLREVQLLKQ 82
Query: 83 VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
++HP + +L + + G +L + S + FS+
Sbjct: 83 LDHPNIXKLYEFFEDKGYFYLVGEVYTGGEL--FDEIISRKRFSEVDAARIIRQVLSGIT 140
Query: 143 XXHNMGIVYRDLKPENIMIQ---ENGHIMLVDFDLST 176
H IV+RDLKPEN++++ ++ +I ++DF LST
Sbjct: 141 YXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST 177
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 55
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + I+
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I NT IK
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 142
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
L++ + G+ + H V T Y APEI+ G K
Sbjct: 143 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 178
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 59
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + I+
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I NT IK
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 146
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
L++ + G+ + H V T Y APEI+ G K
Sbjct: 147 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 182
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 57
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + I+
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I NT IK
Sbjct: 117 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 144
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
L++ + G+ + H V T Y APEI+ G K
Sbjct: 145 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 180
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---GSSRKETFYRILCRPPDL 303
T +VAPE+++ +G+D D WSLG++L+ ML G TPF + +E RI L
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 304 VGE-----PTPLRNLIRRLLEKDPTKRIGVEEIKGHEF 336
G ++L+ ++L DP +R+ +++ H +
Sbjct: 248 SGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPW 285
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
+LR +HP + L+ V K V + G +L L K ++ FS+ F
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGEL--LDKILRQKFFSEREASFVLHTIG 131
Query: 139 XXXXXXHNMGIVYRDLKPENIM-IQENGH---IMLVDFDLSTKL 178
H+ G+V+RDLKP NI+ + E+G+ + + DF + +L
Sbjct: 132 KTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL 175
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 56
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + I+
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I NT IK
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 143
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
L++ + G+ + H V T Y APEI+ G K
Sbjct: 144 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 179
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 56
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + I+
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I NT IK
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 143
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
L++ + G+ + H V T Y APEI+ G K
Sbjct: 144 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 179
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 55
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + I+
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I NT IK
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 142
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
L++ + G+ + H V T Y APEI+ G K
Sbjct: 143 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 178
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 60
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + I+
Sbjct: 61 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 119
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I NT IK
Sbjct: 120 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 147
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
L++ + G+ + H V T Y APEI+ G K
Sbjct: 148 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 183
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 243
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 244 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 295
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 58
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + I+
Sbjct: 59 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I NT IK
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 145
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
L++ + G+ + H V T Y APEI+ G K
Sbjct: 146 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 181
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 57
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + I+
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I NT IK
Sbjct: 117 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 144
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
L++ + G+ + H V T Y APEI+ G K
Sbjct: 145 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 180
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 59
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + I+
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I NT IK
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 146
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
L++ + G+ + H V T Y APEI+ G K
Sbjct: 147 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 182
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 58
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + I+
Sbjct: 59 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I NT IK
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 145
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
L++ + G+ + H V T Y APEI+ G K
Sbjct: 146 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 181
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 56
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + I+
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I NT IK
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 143
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
L++ + G+ + H V T Y APEI+ G K
Sbjct: 144 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 179
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 122/352 (34%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 58
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ DL + I+
Sbjct: 59 KELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I NT IK
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 145
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
L++ + G+ + H V T Y APEI+ G K
Sbjct: 146 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 181
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 13/106 (12%)
Query: 245 VGTEEYVAPEIIEGK------GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC 298
GT Y+APEIIE G+ VD WS GV+++ +L G+ PF ++ R++
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF-WHRKQMLMLRMIM 229
Query: 299 RPPDLVGEPT------PLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
G P +++L+ R L P KR EE H FF+
Sbjct: 230 SGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 275
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 9/159 (5%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISF-EQRVLRN 82
LGRG VV + + +A+K+I D+ S + + + R + E +LR
Sbjct: 12 LGRGVSSVVRRCIHKPTCKEYAVKII--DVTGGGS---FSAEEVQELREATLKEVDILRK 66
Query: 83 VE-HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXX 141
V HP + +L+ T+ F D +L ++ S+ R
Sbjct: 67 VSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVI 124
Query: 142 XXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP 180
H + IV+RDLKPENI++ ++ +I L DF S +L P
Sbjct: 125 CALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 163
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 13/106 (12%)
Query: 245 VGTEEYVAPEIIEGK------GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC 298
GT Y+APEIIE G+ VD WS GV+++ +L G+ PF ++ R++
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF-WHRKQMLMLRMIM 242
Query: 299 RPPDLVGEPT------PLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
G P +++L+ R L P KR EE H FF+
Sbjct: 243 SGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 9/159 (5%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISF-EQRVLRN 82
LGRG VV + + +A+K+I D+ S + + + R + E +LR
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKII--DVTGGGS---FSAEEVQELREATLKEVDILRK 79
Query: 83 VE-HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXX 141
V HP + +L+ T+ F D +L ++ S+ R
Sbjct: 80 VSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVI 137
Query: 142 XXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP 180
H + IV+RDLKPENI++ ++ +I L DF S +L P
Sbjct: 138 CALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 176
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 122/352 (34%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 59
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ DL + I+
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I NT IK
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 146
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
L++ + G+ + H V T Y APEI+ G K
Sbjct: 147 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 182
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---GSSRKETFYRILCRPPDL 303
T +VAPE+++ +G+D D WSLG++L+ ML G TPF + +E RI L
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 304 VGE-----PTPLRNLIRRLLEKDPTKRIGVEEIKGHEF 336
G ++L+ ++L DP +R+ +++ H +
Sbjct: 248 SGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPW 285
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
+LR +HP + L+ V K V + G +L L K ++ FS+ F
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGEL--LDKILRQKFFSEREASFVLHTIG 131
Query: 139 XXXXXXHNMGIVYRDLKPENIM-IQENGH---IMLVDFDLSTKL 178
H+ G+V+RDLKP NI+ + E+G+ + + DF + +L
Sbjct: 132 KTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL 175
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 123/354 (34%), Gaps = 110/354 (31%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G G GVV+ KD + ++ K L D G I E +L+ +
Sbjct: 29 VGEGTYGVVYKAKDSQGR-----------IVALKRIRLDAEDEGIPSTAIR-EISLLKEL 76
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
HP + L V+ +++ + ++ +DL + + + D I+
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGL-QDSQIKIYLYQLLRGVAH 134
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H I++RDLKP+N++I +G + L DF L+ R
Sbjct: 135 CHQHRILHRDLKPQNLLINSDGALKLADFGLA---------------------------R 167
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-KGHD 262
+F GI + H V T Y AP+++ G K +
Sbjct: 168 AF-------GIPVRSYTHE----------------------VVTLWYRAPDVLMGSKKYS 198
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLR----------- 311
+VD WS+G + EM+ G F G + + +I ++G P P
Sbjct: 199 TSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIF----SILGTPNPREWPQVQELPLWK 254
Query: 312 ------------------------NLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
+L+ +L DP KRI + H +FK ++
Sbjct: 255 QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 13/106 (12%)
Query: 245 VGTEEYVAPEIIEGK------GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC 298
GT Y+APEIIE G+ VD WS GV+++ +L G+ PF ++ R++
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF-WHRKQMLMLRMIM 242
Query: 299 RPPDLVGEPT------PLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
G P +++L+ R L P KR EE H FF+
Sbjct: 243 SGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 9/159 (5%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISF-EQRVLRN 82
LGRG VV + + +A+K+I D+ S + + + R + E +LR
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKII--DVTGGGS---FSAEEVQELREATLKEVDILRK 79
Query: 83 VE-HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXX 141
V HP + +L+ T+ F D +L ++ S+ R
Sbjct: 80 VSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVI 137
Query: 142 XXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP 180
H + IV+RDLKPENI++ ++ +I L DF S +L P
Sbjct: 138 CALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 176
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-----LCR 299
+GT Y+APE++ K +D D WS+GV+L +L G PF G + +E ++
Sbjct: 199 LGTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFD 257
Query: 300 PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
P+ ++LI+++L+ D +RI ++ H + K
Sbjct: 258 SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIK 296
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 28/165 (16%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V LG GA G V L +D + A+K+I + + S ++ E VL
Sbjct: 42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNS-----------KLLEEVAVL 90
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYC-PGRDL-----HSLRKQQSEQMFSDDTIRFXX 134
+ ++HP + +L DK Y + C G +L H ++ F++
Sbjct: 91 KLLDHPNIMKLYDFFE-DKRNYYLVMECYKGGELFDEIIHRMK-------FNEVDAAVII 142
Query: 135 XXXXXXXXXXHNMGIVYRDLKPENIMI---QENGHIMLVDFDLST 176
H IV+RDLKPEN+++ +++ I +VDF LS
Sbjct: 143 KQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSA 187
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 123/352 (34%), Gaps = 99/352 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 59
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + I+
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I NT IK
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 146
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
L++ + G+ + H V T Y APEI+ G K
Sbjct: 147 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 182
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVN 341
PL R+L+ ++L DP KRI + H FF+ V
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 140/387 (36%), Gaps = 99/387 (25%)
Query: 2 NDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL 61
N +++D + S LG G G V + + + E FALK++ ++ EL
Sbjct: 27 NAIIDDYKVTS---------QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL 77
Query: 62 TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS 121
+ R S ++R V+ + + K + ++ G +L S + +
Sbjct: 78 --------HWRASQCPHIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDRG 124
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQE---NGHIMLVDFDLSTKL 178
+Q F++ H++ I +RD+KPEN++ N + L DF +
Sbjct: 125 DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA--- 181
Query: 179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXX 238
K +S SL P +
Sbjct: 182 -----------------------------KETTSHNSLTTPCY----------------- 195
Query: 239 XXXXXFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---------GSSR 289
T YVAPE++ + +D + D WSLGV+++ +L G PF G
Sbjct: 196 --------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 247
Query: 290 KETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKIS 349
+ + P+ ++ LIR LL+ +PT+R+ + E H + +++ +
Sbjct: 248 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW--------IMQST 299
Query: 350 RPPNIPARFEHENNESDGRGRDGTKEI 376
+ P P E R D +E+
Sbjct: 300 KVPQTPLHTSRVLKEDKERWEDVKEEM 326
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 140/387 (36%), Gaps = 99/387 (25%)
Query: 2 NDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL 61
N +++D + S LG G G V + + + E FALK++ ++ EL
Sbjct: 17 NAIIDDYKVTS---------QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL 67
Query: 62 TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS 121
+ R S ++R V+ + + K + ++ G +L S + +
Sbjct: 68 --------HWRASQCPHIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDRG 114
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQE---NGHIMLVDFDLSTKL 178
+Q F++ H++ I +RD+KPEN++ N + L DF +
Sbjct: 115 DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA--- 171
Query: 179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXX 238
K +S SL P +
Sbjct: 172 -----------------------------KETTSHNSLTTPCY----------------- 185
Query: 239 XXXXXFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---------GSSR 289
T YVAPE++ + +D + D WSLGV+++ +L G PF G
Sbjct: 186 --------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 237
Query: 290 KETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKIS 349
+ + P+ ++ LIR LL+ +PT+R+ + E H + +++ +
Sbjct: 238 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW--------IMQST 289
Query: 350 RPPNIPARFEHENNESDGRGRDGTKEI 376
+ P P E R D +E+
Sbjct: 290 KVPQTPLHTSRVLKEDKERWEDVKEEM 316
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 140/387 (36%), Gaps = 99/387 (25%)
Query: 2 NDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL 61
N +++D + S LG G G V + + + E FALK++ ++ EL
Sbjct: 19 NAIIDDYKVTS---------QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL 69
Query: 62 TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS 121
+ R S ++R V+ + + K + ++ G +L S + +
Sbjct: 70 --------HWRASQCPHIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDRG 116
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQE---NGHIMLVDFDLSTKL 178
+Q F++ H++ I +RD+KPEN++ N + L DF +
Sbjct: 117 DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA--- 173
Query: 179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXX 238
K +S SL P +
Sbjct: 174 -----------------------------KETTSHNSLTTPCY----------------- 187
Query: 239 XXXXXFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---------GSSR 289
T YVAPE++ + +D + D WSLGV+++ +L G PF G
Sbjct: 188 --------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 239
Query: 290 KETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKIS 349
+ + P+ ++ LIR LL+ +PT+R+ + E H + +++ +
Sbjct: 240 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW--------IMQST 291
Query: 350 RPPNIPARFEHENNESDGRGRDGTKEI 376
+ P P E R D +E+
Sbjct: 292 KVPQTPLHTSRVLKEDKERWEDVKEEM 318
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 140/387 (36%), Gaps = 99/387 (25%)
Query: 2 NDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL 61
N +++D + S LG G G V + + + E FALK++ ++ EL
Sbjct: 12 NAIIDDYKVTS---------QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL 62
Query: 62 TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS 121
+ R S ++R V+ + + K + ++ G +L S + +
Sbjct: 63 --------HWRASQCPHIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDRG 109
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQE---NGHIMLVDFDLSTKL 178
+Q F++ H++ I +RD+KPEN++ N + L DF +
Sbjct: 110 DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA--- 166
Query: 179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXX 238
K +S SL P +
Sbjct: 167 -----------------------------KETTSHNSLTTPCY----------------- 180
Query: 239 XXXXXFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---------GSSR 289
T YVAPE++ + +D + D WSLGV+++ +L G PF G
Sbjct: 181 --------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 232
Query: 290 KETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKIS 349
+ + P+ ++ LIR LL+ +PT+R+ + E H + +++ +
Sbjct: 233 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW--------IMQST 284
Query: 350 RPPNIPARFEHENNESDGRGRDGTKEI 376
+ P P E R D +E+
Sbjct: 285 KVPQTPLHTSRVLKEDKERWEDVKEEM 311
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 122/318 (38%), Gaps = 60/318 (18%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRIS-FEQR 78
++ +G G G V L + +++ + +A+KV+ N KY R + E
Sbjct: 39 VIRKMGDGTFGRVLLCQHIDNKKYYAVKVV---------------RNIKKYTRSAKIEAD 83
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGY---AIDYCP-GRDLHSLRKQQSEQMFSDDTIRFXX 134
+L+ +++ + V KF+ Y + + P G L+ + + + F + I+
Sbjct: 84 ILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYC 143
Query: 135 XXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAAN 194
M + + DLKPENI++ + P +
Sbjct: 144 IEILKALNYLRKMSLTHTDLKPENILLDD-------------------PYFEKSLITVRR 184
Query: 195 TRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPE 254
G KK + + +K S+GI L D + T +Y APE
Sbjct: 185 VTDG-KKIQIYRTK--STGIKLID------------FGCATFKSDYHGSIINTRQYRAPE 229
Query: 255 IIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLI 314
+I G D + D WS G VL E+ G+ FR E + + + +P P +N++
Sbjct: 230 VILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMM-----ESIIQPIP-KNML 283
Query: 315 RRLLEKDPTKRIGVEEIK 332
+ + +K + +E+K
Sbjct: 284 YEATKTNGSKYVNKDELK 301
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 13/107 (12%)
Query: 244 FVGTEEYVAPEIIEGK------GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL 297
GT Y+APEI++ G+ VD W+ GV+L +L G+ PF R+ R++
Sbjct: 259 LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF-WHRRQILMLRMI 317
Query: 298 CR------PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
P+ + +++LI RLL+ DP R+ E+ H FF+
Sbjct: 318 MEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 62/159 (38%), Gaps = 8/159 (5%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
+GRG VV + FA+K++ E ++ L+ + E +LR
Sbjct: 101 VIGRGVSSVVRRCVHRATGHEFAVKIM-----EVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 83 VE-HPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXX 141
V HP + L + F+ D +L ++ S+ R
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKV--ALSEKETRSIMRSLLEAV 213
Query: 142 XXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP 180
H IV+RDLKPENI++ +N I L DF S L P
Sbjct: 214 SFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEP 252
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 140/387 (36%), Gaps = 99/387 (25%)
Query: 2 NDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL 61
N +++D + S LG G G V + + + E FALK++ ++ EL
Sbjct: 11 NAIIDDYKVTS---------QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL 61
Query: 62 TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS 121
+ R S ++R V+ + + K + ++ G +L S + +
Sbjct: 62 --------HWRASQCPHIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDRG 108
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQE---NGHIMLVDFDLSTKL 178
+Q F++ H++ I +RD+KPEN++ N + L DF +
Sbjct: 109 DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA--- 165
Query: 179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXX 238
K +S SL P +
Sbjct: 166 -----------------------------KETTSHNSLTTPCY----------------- 179
Query: 239 XXXXXFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---------GSSR 289
T YVAPE++ + +D + D WSLGV+++ +L G PF G
Sbjct: 180 --------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 231
Query: 290 KETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKIS 349
+ + P+ ++ LIR LL+ +PT+R+ + E H + +++ +
Sbjct: 232 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW--------IMQST 283
Query: 350 RPPNIPARFEHENNESDGRGRDGTKEI 376
+ P P E R D +E+
Sbjct: 284 KVPQTPLHTSRVLKEDKERWEDVKEEM 310
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 140/387 (36%), Gaps = 99/387 (25%)
Query: 2 NDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL 61
N +++D + S LG G G V + + + E FALK++ ++ EL
Sbjct: 13 NAIIDDYKVTS---------QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL 63
Query: 62 TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS 121
+ R S ++R V+ + + K + ++ G +L S + +
Sbjct: 64 --------HWRASQCPHIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDRG 110
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQE---NGHIMLVDFDLSTKL 178
+Q F++ H++ I +RD+KPEN++ N + L DF +
Sbjct: 111 DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA--- 167
Query: 179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXX 238
K +S SL P +
Sbjct: 168 -----------------------------KETTSHNSLTTPCY----------------- 181
Query: 239 XXXXXFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---------GSSR 289
T YVAPE++ + +D + D WSLGV+++ +L G PF G
Sbjct: 182 --------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 233
Query: 290 KETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKIS 349
+ + P+ ++ LIR LL+ +PT+R+ + E H + +++ +
Sbjct: 234 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW--------IMQST 285
Query: 350 RPPNIPARFEHENNESDGRGRDGTKEI 376
+ P P E R D +E+
Sbjct: 286 KVPQTPLHTSRVLKEDKERWEDVKEEM 312
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 140/387 (36%), Gaps = 99/387 (25%)
Query: 2 NDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL 61
N +++D + S LG G G V + + + E FALK++ ++ EL
Sbjct: 18 NAIIDDYKVTS---------QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL 68
Query: 62 TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS 121
+ R S ++R V+ + + K + ++ G +L S + +
Sbjct: 69 --------HWRASQCPHIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDRG 115
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQE---NGHIMLVDFDLSTKL 178
+Q F++ H++ I +RD+KPEN++ N + L DF +
Sbjct: 116 DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA--- 172
Query: 179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXX 238
K +S SL P +
Sbjct: 173 -----------------------------KETTSHNSLTTPCY----------------- 186
Query: 239 XXXXXFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---------GSSR 289
T YVAPE++ + +D + D WSLGV+++ +L G PF G
Sbjct: 187 --------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 238
Query: 290 KETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKIS 349
+ + P+ ++ LIR LL+ +PT+R+ + E H + +++ +
Sbjct: 239 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW--------IMQST 290
Query: 350 RPPNIPARFEHENNESDGRGRDGTKEI 376
+ P P E R D +E+
Sbjct: 291 KVPQTPLHTSRVLKEDKERWEDVKEEM 317
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 140/387 (36%), Gaps = 99/387 (25%)
Query: 2 NDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL 61
N +++D + S LG G G V + + + E FALK++ ++ EL
Sbjct: 57 NAIIDDYKVTS---------QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL 107
Query: 62 TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS 121
+ R S ++R V+ + + K + ++ G +L S + +
Sbjct: 108 --------HWRASQCPHIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDRG 154
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQE---NGHIMLVDFDLSTKL 178
+Q F++ H++ I +RD+KPEN++ N + L DF +
Sbjct: 155 DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA--- 211
Query: 179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXX 238
K +S SL P +
Sbjct: 212 -----------------------------KETTSHNSLTTPCY----------------- 225
Query: 239 XXXXXFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---------GSSR 289
T YVAPE++ + +D + D WSLGV+++ +L G PF G
Sbjct: 226 --------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 277
Query: 290 KETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKIS 349
+ + P+ ++ LIR LL+ +PT+R+ + E H + +++ +
Sbjct: 278 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW--------IMQST 329
Query: 350 RPPNIPARFEHENNESDGRGRDGTKEI 376
+ P P E R D +E+
Sbjct: 330 KVPQTPLHTSRVLKEDKERWEDVKEEM 356
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 123/365 (33%), Gaps = 107/365 (29%)
Query: 16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISF 75
S ++ S LG GA GVV + E A+K I E K L R
Sbjct: 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-----EPFDKPLFA-------LRTLR 58
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVG----YAIDYCPGRDLHSLRKQQSEQMFSDDTIR 131
E ++L++ +H + + + D F Y I DLH + S QM SDD I+
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQ 115
Query: 132 FXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
+ H +++RDLKP N++I N + + DF L+ + S T
Sbjct: 116 YFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPT-- 173
Query: 192 AANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYV 251
+SG+ + V T Y
Sbjct: 174 --GQQSGMTEX------------------------------------------VATRWYR 189
Query: 252 APEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP--- 307
APE+ + + A+D WS G +L E+ F G + I ++G P
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIF----GIIGTPHSD 245
Query: 308 -----------------------TPLR-----------NLIRRLLEKDPTKRIGVEEIKG 333
PL +L++R+L DP KRI +E
Sbjct: 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305
Query: 334 HEFFK 338
H + +
Sbjct: 306 HPYLQ 310
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 140/387 (36%), Gaps = 99/387 (25%)
Query: 2 NDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL 61
N +++D + S LG G G V + + + E FALK++ ++ EL
Sbjct: 13 NAIIDDYKVTS---------QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL 63
Query: 62 TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS 121
+ R S ++R V+ + + K + ++ G +L S + +
Sbjct: 64 --------HWRASQCPHIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDRG 110
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQE---NGHIMLVDFDLSTKL 178
+Q F++ H++ I +RD+KPEN++ N + L DF +
Sbjct: 111 DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA--- 167
Query: 179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXX 238
K +S SL P +
Sbjct: 168 -----------------------------KETTSHNSLTTPCY----------------- 181
Query: 239 XXXXXFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---------GSSR 289
T YVAPE++ + +D + D WSLGV+++ +L G PF G
Sbjct: 182 --------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 233
Query: 290 KETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKIS 349
+ + P+ ++ LIR LL+ +PT+R+ + E H + +++ +
Sbjct: 234 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW--------IMQST 285
Query: 350 RPPNIPARFEHENNESDGRGRDGTKEI 376
+ P P E R D +E+
Sbjct: 286 KVPQTPLHTSRVLKEDKERWEDVKEEM 312
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 85/226 (37%), Gaps = 83/226 (36%)
Query: 145 HNMGIVYRDLKPENIMIQ---ENGHIMLVDFDLSTKL---SPKTPQASPKTVLAANTRSG 198
H GI +RDLKPENI+ + + + + DFDL + + + TP +P+
Sbjct: 128 HTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPE---------- 177
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE- 257
L+ C G+ EY+APE++E
Sbjct: 178 -------LTTPC-----------------------------------GSAEYMAPEVVEV 195
Query: 258 ----GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYR--ILCR------------ 299
+D D WSLGVVL+ ML G PF G + + +CR
Sbjct: 196 FTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQE 255
Query: 300 ------PPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
D + ++LI +LL +D +R+ ++ H + +G
Sbjct: 256 GKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 83/223 (37%), Gaps = 75/223 (33%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRS 204
HN GI +RDLKPENI+ + Q SP + + SGIK
Sbjct: 128 HNKGIAHRDLKPENILCEHPN------------------QVSPVKICDFDLGSGIK---- 165
Query: 205 FLSKFCS--SGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
L+ CS S L P G+ EY+APE++E +
Sbjct: 166 -LNGDCSPISTPELLTPC-------------------------GSAEYMAPEVVEAFSEE 199
Query: 263 FAV-----DWWSLGVVLHEMLYGATPFRGSSRKETFY-RILCRPP--------------- 301
++ D WSLGV+L+ +L G PF G + + R P
Sbjct: 200 ASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYE 259
Query: 302 ----DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV 340
D ++LI +LL +D +R+ ++ H + +G
Sbjct: 260 FPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGC 302
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 127/357 (35%), Gaps = 120/357 (33%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
+G G+ GVVF K VES E A+K + +D K N E +++R
Sbjct: 47 VIGNGSFGVVFQAKLVESDE-VAIKKVLQD------KRFKNR-----------ELQIMRI 88
Query: 83 VEHPLLPRLRGVLSTDK------FVGYAIDYCPGR----DLHSLRKQQSEQMFSDDTIRF 132
V+HP + L+ ++ F+ ++Y P H + +Q+ M I+
Sbjct: 89 VKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPML---LIKL 145
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQ-ENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
H++GI +RD+KP+N+++ +G + L+DF S K ++
Sbjct: 146 YMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDF------------GSAKILI 193
Query: 192 AANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYV 251
A +S CS Y
Sbjct: 194 AGEPN---------VSXICS------------------------------------RYYR 208
Query: 252 APEIIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSS---------------------- 288
APE+I G + +D WS G V+ E++ G F G S
Sbjct: 209 APELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKT 268
Query: 289 -----RKETFYRILCRPPDLVGEP-TP--LRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
+ F +I P V P TP +LI RLLE P+ R+ E H FF
Sbjct: 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 140/387 (36%), Gaps = 99/387 (25%)
Query: 2 NDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL 61
N +++D + S LG G G V + + + E FALK++ ++ EL
Sbjct: 63 NAIIDDYKVTS---------QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL 113
Query: 62 TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS 121
+ R S ++R V+ + + K + ++ G +L S + +
Sbjct: 114 --------HWRASQCPHIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDRG 160
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQE---NGHIMLVDFDLSTKL 178
+Q F++ H++ I +RD+KPEN++ N + L DF +
Sbjct: 161 DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA--- 217
Query: 179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXX 238
K +S SL P +
Sbjct: 218 -----------------------------KETTSHNSLTTPCY----------------- 231
Query: 239 XXXXXFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---------GSSR 289
T YVAPE++ + +D + D WSLGV+++ +L G PF G
Sbjct: 232 --------TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 283
Query: 290 KETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKIS 349
+ + P+ ++ LIR LL+ +PT+R+ + E H + +++ +
Sbjct: 284 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW--------IMQST 335
Query: 350 RPPNIPARFEHENNESDGRGRDGTKEI 376
+ P P E R D +E+
Sbjct: 336 KVPQTPLHTSRVLKEDKERWEDVKEEM 362
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-LCRPPD 302
FVGT ++APE+I+ +D D WSLG+ E+ G P + + I PP
Sbjct: 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPT 238
Query: 303 LVGEPT-PLRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
L G + PL+ + L K+P+ R +E+ H+F
Sbjct: 239 LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 274
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 24/35 (68%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
H+ ++RD+K N+++ E+G + L DF ++ +L+
Sbjct: 136 HSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 170
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 107/311 (34%), Gaps = 74/311 (23%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G V L +D+ A+KV+ DL S L ++RR E + +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYL-------RFRR---EAQNAAAL 69
Query: 84 EHPLLPRLRGVLSTDKFVG----YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
HP + + + G ++Y G L + + M I
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQA 128
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H GI++RD+KP NIMI + ++DF GI
Sbjct: 129 LNFS-HQNGIIHRDVKPANIMISATNAVKVMDF-------------------------GI 162
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
+ SG S+ +GT +Y++PE G
Sbjct: 163 AR------AIADSGNSV----------------------TQTAAVIGTAQYLSPEQARGD 194
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PPDL--VGEPTPLRNLI 314
D D +SLG VL+E+L G PF G S Y+ + PP G L ++
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSARHEGLSADLDAVV 254
Query: 315 RRLLEKDPTKR 325
+ L K+P R
Sbjct: 255 LKALAKNPENR 265
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
VGT Y++PE I G++F D WSLG +L+EM +PF G K Y + +
Sbjct: 196 LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD--KMNLYSLCKKIEQC 253
Query: 304 VGEPTP-------LRNLIRRLLEKDPTKRIGVEEI 331
P P LR L+ + DP KR V +
Sbjct: 254 DYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV 288
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 69/171 (40%), Gaps = 14/171 (8%)
Query: 18 LRIVSALGRGAKGVVFLVKDVESSESFALK-VIWRDLIEKKSKELTNNDNGDKYRRISFE 76
RI +GRG V+ + ALK V DL++ K++ D + I
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKAR-------ADCIKEID-- 84
Query: 77 QRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRK--QQSEQMFSDDTIRFXX 134
+L+ + HP + + D + ++ DL + K ++ +++ + T+
Sbjct: 85 --LLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYF 142
Query: 135 XXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
H+ +++RD+KP N+ I G + L D L S KT A
Sbjct: 143 VQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA 193
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 122/349 (34%), Gaps = 99/349 (28%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
V +G G GVV+ ++ + E ALK I D T R IS +L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLD-------TETEGVPSTAIREIS----LL 56
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
+ + HP + +L V+ T+ + ++ +DL + I+
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
H+ +++RDLKP+N++I NT IK
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLI--------------------------------NTEGAIK 143
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-K 259
L++ + G+ + H V T Y APEI+ G K
Sbjct: 144 LADFGLAR--AFGVPVRTYXHE----------------------VVTLWYRAPEILLGCK 179
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL--CRPPDLVGEP---------- 307
+ AVD WSLG + EM+ F G S + +RI PD V P
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 308 --------------TPL----RNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
PL R+L+ ++L DP KRI + H FF+
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-LCRPPD 302
FVGT ++APE+I+ +D D WSLG+ E+ G P + + I PP
Sbjct: 184 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPT 243
Query: 303 LVGEPT-PLRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
L G + PL+ + L K+P+ R +E+ H+F
Sbjct: 244 LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 279
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+GT EY+APEI+ A D W++G++ + +L +PF G +ET+ I D
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDY 252
Query: 304 VGEPTP-----LRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLL 346
E + I+ LL K+P KR E H + + ++E L
Sbjct: 253 SEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLF 300
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
Query: 86 PLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXXXH 145
P + L V + ++Y G ++ SL + +M S++ + H
Sbjct: 89 PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH 148
Query: 146 NMGIVYRDLKPENIM---IQENGHIMLVDFDLSTKL 178
IV+ DLKP+NI+ I G I +VDF +S K+
Sbjct: 149 QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI 184
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-LCRPPD 302
FVGT ++APE+I+ +D D WSLG+ E+ G P + + I PP
Sbjct: 164 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPT 223
Query: 303 LVGEPT-PLRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
L G + PL+ + L K+P+ R +E+ H+F
Sbjct: 224 LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 259
Score = 31.6 bits (70), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 24/35 (68%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
H+ ++RD+K N+++ E+G + L DF ++ +L+
Sbjct: 121 HSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 155
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI-LCRPPD 302
FVGT ++APE+I+ +D D WSLG+ E+ G P + + I PP
Sbjct: 164 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPT 223
Query: 303 LVGEPT-PLRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
L G + PL+ + L K+P+ R +E+ H+F
Sbjct: 224 LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 82/223 (36%), Gaps = 75/223 (33%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRS 204
HN GI +RDLKPENI+ + Q SP + SGIK
Sbjct: 128 HNKGIAHRDLKPENILCEHPN------------------QVSPVKICDFGLGSGIK---- 165
Query: 205 FLSKFCS--SGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
L+ CS S L P G+ EY+APE++E +
Sbjct: 166 -LNGDCSPISTPELLTPC-------------------------GSAEYMAPEVVEAFSEE 199
Query: 263 FAV-----DWWSLGVVLHEMLYGATPFRGSSRKETFY-RILCRPP--------------- 301
++ D WSLGV+L+ +L G PF G + + R P
Sbjct: 200 ASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYE 259
Query: 302 ----DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV 340
D ++LI +LL +D +R+ ++ H + +G
Sbjct: 260 FPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGC 302
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISF-EQRV 79
+ +G G+ GVVF ++ ++ + A+K + +++ ++I+ E R+
Sbjct: 8 IGKIGEGSYGVVFKCRNRDTGQIVAIK------------KFLESEDDPVIKKIALREIRM 55
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
L+ ++HP L L V + + +YC LH L + Q + + ++
Sbjct: 56 LKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQ--RGVPEHLVKSITWQTLQ 113
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
H ++RD+KPENI+I ++ I L DF + L+
Sbjct: 114 AVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLT 153
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 33/129 (25%)
Query: 245 VGTEEYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
V T Y +PE++ G + VD W++G V E+L G + G S + Y I DL
Sbjct: 163 VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDL 222
Query: 304 VG-----------------------EPTPLR---------NLIRRLLEKDPTKRIGVEEI 331
+ EP L+ L++ L DPT+R+ E++
Sbjct: 223 IPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQL 282
Query: 332 KGHEFFKGV 340
H +F+ +
Sbjct: 283 LHHPYFENI 291
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 94/276 (34%), Gaps = 69/276 (25%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G V L +D+ A+KV+ DL S L ++RR E + +
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYL-------RFRR---EAQNAAAL 69
Query: 84 EHPLLPRLRGVLSTDKFVG----YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
HP + + + G ++Y G L + + M I
Sbjct: 70 NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQA 128
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H GI++RD+KP NIMI + ++DF GI
Sbjct: 129 LNFS-HQNGIIHRDVKPANIMISATNAVKVMDF-------------------------GI 162
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
+ SG S+ +GT +Y++PE G
Sbjct: 163 AR------AIADSGNSV----------------------TQTAAVIGTAQYLSPEQARGD 194
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYR 295
D D +SLG VL+E+L G PF G S Y+
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 107/311 (34%), Gaps = 74/311 (23%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G V L +D+ A+KV+ DL S L ++RR E + +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYL-------RFRR---EAQNAAAL 69
Query: 84 EHPLLPRLRGVLSTDKFVG----YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
HP + + + G ++Y G L + + M I
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQA 128
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H GI++RD+KP NIMI + ++DF GI
Sbjct: 129 LNFS-HQNGIIHRDVKPANIMISATNAVKVMDF-------------------------GI 162
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
+ SG S+ +GT +Y++PE G
Sbjct: 163 AR------AIADSGNSV----------------------TQTAAVIGTAQYLSPEQARGD 194
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PPDL--VGEPTPLRNLI 314
D D +SLG VL+E+L G PF G S Y+ + PP G L ++
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVV 254
Query: 315 RRLLEKDPTKR 325
+ L K+P R
Sbjct: 255 LKALAKNPENR 265
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 94/276 (34%), Gaps = 69/276 (25%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G V L +D+ A+KV+ DL S L ++RR E + +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYL-------RFRR---EAQNAAAL 69
Query: 84 EHPLLPRLRGVLSTDKFVG----YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
HP + + + G ++Y G L + + M I
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQA 128
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H GI++RD+KP NI+I + +VDF GI
Sbjct: 129 LNFS-HQNGIIHRDVKPANILISATNAVKVVDF-------------------------GI 162
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
+ SG S+ +GT +Y++PE G
Sbjct: 163 AR------AIADSGNSVXQ----------------------TAAVIGTAQYLSPEQARGD 194
Query: 260 GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYR 295
D D +SLG VL+E+L G PF G S Y+
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 55/151 (36%), Gaps = 53/151 (35%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRS 204
H GI++RD+KP NIMI + ++DF GI +
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDF-------------------------GIAR--- 164
Query: 205 FLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDFA 264
SG S+ +GT +Y++PE G D
Sbjct: 165 ---AIADSGNSV----------------------TQTAAVIGTAQYLSPEQARGDSVDAR 199
Query: 265 VDWWSLGVVLHEMLYGATPFRGSSRKETFYR 295
D +SLG VL+E+L G PF G S Y+
Sbjct: 200 SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 13/152 (8%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G G G VF K+ E+ E ALK + L ++D G + E +L+ +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRV----------RLDDDDEGVPSSALR-EICLLKEL 58
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+H + RL VL +DK + ++C +DL + + + ++
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDL-DPEIVKSFLFQLLKGLGF 116
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ +++RDLKP+N++I NG + L DF L+
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLADFGLA 148
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 246 GTEEYVAPEIIEG--KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
G+ + PEI G F VD WS GV L+ + G PF G + + F I +
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAI 232
Query: 304 VGEP-TPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
G+ PL +L++ +LE +P KR + +I+ H +F+
Sbjct: 233 PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFR 268
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP-------KTPQASPKTVLAANTRS 197
H+ GIV++D+KP N+++ G + + ++ L P +T Q SP +
Sbjct: 126 HSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSP-AFQPPEIAN 184
Query: 198 GIKKRRSFLSKFCSSGISL 216
G+ F S+G++L
Sbjct: 185 GLDTFSGFKVDIWSAGVTL 203
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 20/103 (19%)
Query: 245 VGTEEYVAPEIIEGKGHDF---AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC--- 298
VGT ++APE + F A+D W++GV L+ ++G PF RI+C
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE-------RIMCLHS 250
Query: 299 -------RPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
PD L++LI R+L+K+P RI V EIK H
Sbjct: 251 KIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 24/173 (13%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKS--------KELTNNDNGDKYRRISF 75
+G+G+ GVV L + + +A+KV+ + + +++ + G R
Sbjct: 21 IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPI 80
Query: 76 EQ-----RVLRNVEHPLLPRLRGVLSTDK-----FVGYAIDYCPGRDLHSLRKQQSEQMF 125
EQ +L+ ++HP + +L VL V ++ P ++ +L+
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP------L 134
Query: 126 SDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
S+D RF H I++RD+KP N+++ E+GHI + DF +S +
Sbjct: 135 SEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF 187
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 68/186 (36%), Gaps = 58/186 (31%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRS 204
H GI++RD+KP NIMI + ++DF GI +
Sbjct: 150 HQNGIIHRDVKPANIMISATNAVKVMDF-------------------------GIAR--- 181
Query: 205 FLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDFA 264
SG S+ +GT +Y++PE G D
Sbjct: 182 ---AIADSGNSVTQ----------------------TAAVIGTAQYLSPEQARGDSVDAR 216
Query: 265 VDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PPDL--VGEPTPLRNLIRRLLE 319
D +SLG VL+E+L G PF G S Y+ + PP G L ++ + L
Sbjct: 217 SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALA 276
Query: 320 KDPTKR 325
K+P R
Sbjct: 277 KNPENR 282
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/365 (20%), Positives = 123/365 (33%), Gaps = 125/365 (34%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G+V D + A+K I + ++ QR L
Sbjct: 48 LSYIGEGAYGMVCSAYDNVNKVRVAIKKI------------------SPFEHQTYCQRTL 89
Query: 81 RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R ++ L R ++ + + Y + + G DL+ L K Q S+D I
Sbjct: 90 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH---LSNDHI 146
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
+ H+ +++RDLKP N+++ + + DF L+ P
Sbjct: 147 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD--------- 197
Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEY 250
FL+++ V T Y
Sbjct: 198 ---------HDHTGFLTEY-----------------------------------VATRWY 213
Query: 251 VAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT- 308
APEI + KG+ ++D WS+G +L EML F G + IL ++G P+
Sbjct: 214 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPSQ 269
Query: 309 ------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIKG 333
P +N L+ ++L +P KRI VE+
Sbjct: 270 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 329
Query: 334 HEFFK 338
H + +
Sbjct: 330 HPYLE 334
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 25/180 (13%)
Query: 1 MNDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKE 60
+N V + P R L+ + +G GA G V D + A+K + R +
Sbjct: 19 LNKTVWEVPQR------LQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPF-----QS 67
Query: 61 LTNNDNGDKYRRISFEQRVLRNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHS 115
L + RR E R+L++++H LL S + F Y + G DL++
Sbjct: 68 LIHA------RRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNN 121
Query: 116 LRKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+ K Q+ SD+ ++F H+ GI++RDLKP N+ + E+ + ++DF L+
Sbjct: 122 IVKSQA---LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA 178
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G F GS + RI+ +
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIM----E 243
Query: 303 LVGEPTP 309
+VG P+P
Sbjct: 244 VVGTPSP 250
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 125/329 (37%), Gaps = 74/329 (22%)
Query: 18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
LR+ L G V+ +DV S +ALK + L+N + +K R I E
Sbjct: 30 LRVRRVLAEGGFAFVYEAQDVGSGREYALK-----------RLLSNEE--EKNRAIIQEV 76
Query: 78 RVLRNVE-HPLLPRLRGVLSTDKF---VGYA-----IDYCPGRDLHSLRKQQSEQMFSDD 128
++ + HP + + S K G A + C G+ + L+K +S S D
Sbjct: 77 CFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCD 136
Query: 129 TIR--FXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQAS 186
T+ F I++RDLK EN+++ G I L DF +T +S
Sbjct: 137 TVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTIS-----HY 191
Query: 187 PKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVG 246
P +A R+ +++ + +
Sbjct: 192 PDYSWSAQRRALVEEEITRNT--------------------------------------- 212
Query: 247 TEEYVAPEIIEGKGHDFAV----DWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
T Y PEII+ +F + D W+LG +L+ + + PF ++ PP
Sbjct: 213 TPMYRTPEIIDLYS-NFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYSIPPH 271
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
+ T +LIR +L+ +P +R+ + E+
Sbjct: 272 DT-QYTVFHSLIRAMLQVNPEERLSIAEV 299
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 19/162 (11%)
Query: 19 RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
+ +S +G GA G V DV+S A+K K S+ + + + R E R
Sbjct: 54 QTLSPVGSGAYGSVCSSYDVKSGLKIAVK--------KLSRPFQSIIHAKRTYR---ELR 102
Query: 79 VLRNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFX 133
+L++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 103 LLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFL 159
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 160 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 201
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 33/127 (25%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGS---SRKETFYRILCR 299
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ ++ + R+
Sbjct: 211 YVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGT 270
Query: 300 PP----------------------------DLVGEPTPLR-NLIRRLLEKDPTKRIGVEE 330
PP D+ PL +L+ ++L D KRI E
Sbjct: 271 PPASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASE 330
Query: 331 IKGHEFF 337
H +F
Sbjct: 331 ALAHPYF 337
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 69/163 (42%), Gaps = 20/163 (12%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNG---DKYRRISFEQ 77
V+ +G GA G V+ +D S ALK S + N + G R ++ +
Sbjct: 9 VAEIGVGAYGTVYKARDPHSGHFVALK----------SVRVPNGEEGLPISTVREVALLR 58
Query: 78 RVLRNVEHPLLPRLRGVLSTDKF-----VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
R L EHP + RL V +T + V ++ +DL + + +TI+
Sbjct: 59 R-LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKD 116
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H IV+RDLKPENI++ G + L DF L+
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 69/163 (42%), Gaps = 20/163 (12%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNG---DKYRRISFEQ 77
V+ +G GA G V+ +D S ALK S + N + G R ++ +
Sbjct: 9 VAEIGVGAYGTVYKARDPHSGHFVALK----------SVRVPNGEEGLPISTVREVALLR 58
Query: 78 RVLRNVEHPLLPRLRGVLSTDKF-----VGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
R L EHP + RL V +T + V ++ +DL + + +TI+
Sbjct: 59 R-LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKD 116
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H IV+RDLKPENI++ G + L DF L+
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---------GSSRKETFYRIL 297
T YVAPE++ + +D + D WSLGV+++ +L G PF G R+ +
Sbjct: 192 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYG 251
Query: 298 CRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
P+ + LIR LL+ DPT+R+ + + H +
Sbjct: 252 FPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWI 291
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 110 GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI---QENGH 166
G +L S +++ +Q F++ H+ I +RD+KPEN++ +++
Sbjct: 110 GGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAV 169
Query: 167 IMLVDFDL---STKLSPKTPQASPKTV 190
+ L DF +T+ + +TP +P V
Sbjct: 170 LKLTDFGFAKETTQNALQTPCYTPYYV 196
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV 304
+GT ++APE+I+ G++ D WSLG+ EM G P+ + I PP
Sbjct: 186 IGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTF 245
Query: 305 GEPT----PLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV 340
+P + +++ L K P +R ++ H F +
Sbjct: 246 RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSA 285
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/160 (18%), Positives = 69/160 (43%), Gaps = 16/160 (10%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
++ LG G+ G V+ E+ + A+K + +E +E+ E +
Sbjct: 33 VLEKLGEGSYGSVYKAIHKETGQIVAIKQV---PVESDLQEIIK------------EISI 77
Query: 80 LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXX 139
++ + P + + G + + ++YC + + + +++ + ++D I
Sbjct: 78 MQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTL-TEDEIATILQSTLK 136
Query: 140 XXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
H M ++RD+K NI++ GH L DF ++ +L+
Sbjct: 137 GLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLT 176
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 247 TEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---------GSSRKETFYRIL 297
T YVAPE++ + +D + D WSLGV+++ +L G PF G R+ +
Sbjct: 173 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYG 232
Query: 298 CRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
P+ + LIR LL+ DPT+R+ + + H +
Sbjct: 233 FPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWI 272
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 110 GRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI---QENGH 166
G +L S +++ +Q F++ H+ I +RD+KPEN++ +++
Sbjct: 91 GGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAV 150
Query: 167 IMLVDFDL---STKLSPKTPQASPKTV 190
+ L DF +T+ + +TP +P V
Sbjct: 151 LKLTDFGFAKETTQNALQTPCYTPYYV 177
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 122/318 (38%), Gaps = 76/318 (23%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G G+ G+V + S + A+K + DL +++ +EL N E ++R+
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFN-----------EVVIMRDY 205
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+H + + + +++ G L + + +++ I
Sbjct: 206 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIAAVCLAVLQALSV 262
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H G+++RD+K ++I++ +G + L DF
Sbjct: 263 LHAQGVIHRDIKSDSILLTHDGRVKLSDFG------------------------------ 292
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
FC+ +S E P VGT ++APE+I +
Sbjct: 293 -----FCAQ-VSKEVP--------------------RRKXLVGTPYWMAPELISRLPYGP 326
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-PPDL--VGEPTP-LRNLIRRLLE 319
VD WSLG+++ EM+ G P+ + I PP L + + +P L+ + RLL
Sbjct: 327 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV 386
Query: 320 KDPTKRIGVEEIKGHEFF 337
+DP +R E+ H F
Sbjct: 387 RDPAQRATAAELLKHPFL 404
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 122/318 (38%), Gaps = 76/318 (23%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G G+ G+V + S + A+K + DL +++ +EL N E ++R+
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFN-----------EVVIMRDY 128
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+H + + + +++ G L + + +++ I
Sbjct: 129 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIAAVCLAVLQALSV 185
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H G+++RD+K ++I++ +G + L DF
Sbjct: 186 LHAQGVIHRDIKSDSILLTHDGRVKLSDFG------------------------------ 215
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
FC+ +S E P VGT ++APE+I +
Sbjct: 216 -----FCAQ-VSKEVP--------------------RRKXLVGTPYWMAPELISRLPYGP 249
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-PPDL--VGEPTP-LRNLIRRLLE 319
VD WSLG+++ EM+ G P+ + I PP L + + +P L+ + RLL
Sbjct: 250 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV 309
Query: 320 KDPTKRIGVEEIKGHEFF 337
+DP +R E+ H F
Sbjct: 310 RDPAQRATAAELLKHPFL 327
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 122/318 (38%), Gaps = 76/318 (23%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G G+ G+V + S + A+K + DL +++ +EL N E ++R+
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFN-----------EVVIMRDY 85
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+H + + + +++ G L + + +++ I
Sbjct: 86 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIAAVCLAVLQALSV 142
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H G+++RD+K ++I++ +G + L DF
Sbjct: 143 LHAQGVIHRDIKSDSILLTHDGRVKLSDFG------------------------------ 172
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
FC+ +S E P VGT ++APE+I +
Sbjct: 173 -----FCAQ-VSKEVP--------------------RRKXLVGTPYWMAPELISRLPYGP 206
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-PPDL--VGEPTP-LRNLIRRLLE 319
VD WSLG+++ EM+ G P+ + I PP L + + +P L+ + RLL
Sbjct: 207 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV 266
Query: 320 KDPTKRIGVEEIKGHEFF 337
+DP +R E+ H F
Sbjct: 267 RDPAQRATAAELLKHPFL 284
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 29/151 (19%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+V T Y APE+I G G+ VD WS+GV++ EM+ G F G+ + + +++ +
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVI----EQ 240
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHE 361
+G P+P +++L PT R VE + G ++E L P++ PA EH
Sbjct: 241 LGTPSP--EFMKKL---QPTVRTYVE---NRPKYAGYSFEKLF-----PDVLFPADSEH- 286
Query: 362 NNESDGRGR---------DGTKEIDVEKFVQ 383
N + R D +K I V++ +Q
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKVV 80
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIK 140
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 122/318 (38%), Gaps = 76/318 (23%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G G+ G+V + S + A+K + DL +++ +EL N E ++R+
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFN-----------EVVIMRDY 74
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+H + + + +++ G L + + +++ I
Sbjct: 75 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIAAVCLAVLQALSV 131
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H G+++RD+K ++I++ +G + L DF
Sbjct: 132 LHAQGVIHRDIKSDSILLTHDGRVKLSDFG------------------------------ 161
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
FC+ +S E P VGT ++APE+I +
Sbjct: 162 -----FCAQ-VSKEVP--------------------RRKXLVGTPYWMAPELISRLPYGP 195
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-PPDL--VGEPTP-LRNLIRRLLE 319
VD WSLG+++ EM+ G P+ + I PP L + + +P L+ + RLL
Sbjct: 196 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV 255
Query: 320 KDPTKRIGVEEIKGHEFF 337
+DP +R E+ H F
Sbjct: 256 RDPAQRATAAELLKHPFL 273
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 122/318 (38%), Gaps = 76/318 (23%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G G+ G+V + S + A+K + DL +++ +EL N E ++R+
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFN-----------EVVIMRDY 83
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+H + + + +++ G L + + +++ I
Sbjct: 84 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIAAVCLAVLQALSV 140
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H G+++RD+K ++I++ +G + L DF
Sbjct: 141 LHAQGVIHRDIKSDSILLTHDGRVKLSDFG------------------------------ 170
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
FC+ +S E P VGT ++APE+I +
Sbjct: 171 -----FCAQ-VSKEVP--------------------RRKXLVGTPYWMAPELISRLPYGP 204
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR-PPDL--VGEPTP-LRNLIRRLLE 319
VD WSLG+++ EM+ G P+ + I PP L + + +P L+ + RLL
Sbjct: 205 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV 264
Query: 320 KDPTKRIGVEEIKGHEFF 337
+DP +R E+ H F
Sbjct: 265 RDPAQRATAAELLKHPFL 282
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 25/180 (13%)
Query: 1 MNDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKE 60
+N V + P R L+ + +G GA G V D + A+K + R +
Sbjct: 19 LNKTVWEVPQR------LQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPF-----QS 67
Query: 61 LTNNDNGDKYRRISFEQRVLRNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHS 115
L + RR E R+L++++H LL S + F Y + G DL++
Sbjct: 68 LIHA------RRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNN 121
Query: 116 LRKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+ K Q+ SD+ ++F H+ GI++RDLKP N+ + E+ + ++DF L+
Sbjct: 122 IVKCQA---LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA 178
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G F GS + RI+ +
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIM----E 243
Query: 303 LVGEPTP 309
+VG P+P
Sbjct: 244 VVGTPSP 250
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 29/151 (19%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+V T Y APE+I G G+ VD WS+GV++ EM+ G F G+ + + +++ +
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVI----EQ 240
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHE 361
+G P+P +++L PT R VE + G ++E L P++ PA EH
Sbjct: 241 LGTPSP--EFMKKL---QPTVRTYVE---NRPKYAGYSFEKLF-----PDVLFPADSEH- 286
Query: 362 NNESDGRGR---------DGTKEIDVEKFVQ 383
N + R D +K I V++ +Q
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKVV 80
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIK 140
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 122/318 (38%), Gaps = 76/318 (23%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G G+ G+V + S + A+K + DL +++ +EL N E ++R+
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLFN-----------EVVIMRDY 78
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+H + + + +++ G L + + +++ I
Sbjct: 79 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDI---VTHTRMNEEQIAAVCLAVLQALSV 135
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H G+++RD+K ++I++ +G + L DF
Sbjct: 136 LHAQGVIHRDIKSDSILLTHDGRVKLSDFG------------------------------ 165
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
FC+ +S E P VGT ++APE+I +
Sbjct: 166 -----FCAQ-VSKEVP--------------------RRKXLVGTPYWMAPELISRLPYGP 199
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL-CRPPDL--VGEPTP-LRNLIRRLLE 319
VD WSLG+++ EM+ G P+ + I PP L + + +P L+ + RLL
Sbjct: 200 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLV 259
Query: 320 KDPTKRIGVEEIKGHEFF 337
+DP +R E+ H F
Sbjct: 260 RDPAQRATAAELLKHPFL 277
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 13/152 (8%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G G G VF K+ E+ E ALK + L ++D G + E +L+ +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRV----------RLDDDDEGVPSSALR-EICLLKEL 58
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
+H + RL VL +DK + ++C +DL + + + ++
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDL-DPEIVKSFLFQLLKGLGF 116
Query: 144 XHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ +++RDLKP+N++I NG + L +F L+
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLANFGLA 148
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 11/172 (6%)
Query: 9 PIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGD 68
P+ S+ S V+ +G GA G V+ +D S ALK + L +
Sbjct: 2 PLGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPIS---- 57
Query: 69 KYRRISFEQRVLRNVEHPLLPRLRGVLSTDKF-----VGYAIDYCPGRDLHSLRKQQSEQ 123
R ++ +R L EHP + RL V +T + V ++ +DL + +
Sbjct: 58 TVREVALLRR-LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPP 115
Query: 124 MFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+TI+ H IV+RDLKPENI++ G + L DF L+
Sbjct: 116 GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 167
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 71/151 (47%), Gaps = 29/151 (19%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
FV T Y APE+I G G+ VD WS+G ++ EM+ G F G+ + + +++ +
Sbjct: 187 FVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI----EQ 242
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHE 361
+G P P +++L PT R VE + G ++E L P++ PA EH
Sbjct: 243 LGTPCP--EFMKKL---QPTVRTYVE---NRPKYAGYSFEKLF-----PDVLFPADSEH- 288
Query: 362 NNESDGRGR---------DGTKEIDVEKFVQ 383
N + R D +K I V++ +Q
Sbjct: 289 NKLKASQARDLLSKMLVIDASKRISVDEALQ 319
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 34 IGSGAQGIVCAAYDAILERNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 82
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 83 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 142
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 143 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 175
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 25/180 (13%)
Query: 1 MNDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKE 60
+N V + P R L+ + +G GA G V D + A+K + R +
Sbjct: 11 LNKTVWEVPQR------LQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPF-----QS 59
Query: 61 LTNNDNGDKYRRISFEQRVLRNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHS 115
L + RR E R+L++++H LL S + F Y + G DL++
Sbjct: 60 LIHA------RRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNN 113
Query: 116 LRKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+ K Q+ SD+ ++F H+ GI++RDLKP N+ + E+ + ++DF L+
Sbjct: 114 IVKCQA---LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLA 170
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G F GS + RI+ +
Sbjct: 180 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIM----E 235
Query: 303 LVGEPTP 309
+VG P+P
Sbjct: 236 VVGTPSP 242
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 29/151 (19%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+V T Y APE+I G G+ VD WS+G ++ EM+ G F G+ + + +++ +
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI----EQ 240
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHE 361
+G P+P +++L PT R VE + G ++E L P++ PA EH
Sbjct: 241 LGTPSP--EFMKKL---QPTVRTYVE---NRPKYAGYSFEKLF-----PDVLFPADSEH- 286
Query: 362 NNESDGRGR---------DGTKEIDVEKFVQ 383
N + R D +K I V++ +Q
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 80
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIK 140
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 29/151 (19%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+V T Y APE+I G G+ VD WS+G ++ EM+ G F G+ + + +++ +
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI----EQ 240
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHE 361
+G P+P +++L PT R VE + G ++E L P++ PA EH
Sbjct: 241 LGTPSP--EFMKKL---QPTVRTYVE---NRPKYAGYSFEKLF-----PDVLFPADSEH- 286
Query: 362 NNESDGRGR---------DGTKEIDVEKFVQ 383
N + R D +K I V++ +Q
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 80
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 140
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 29/151 (19%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+V T Y APE+I G G+ VD WS+G ++ EM+ G F G+ + + +++ +
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI----EQ 240
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHE 361
+G P+P +++L PT R VE + G ++E L P++ PA EH
Sbjct: 241 LGTPSP--EFMKKL---QPTVRTYVE---NRPKYAGYSFEKLF-----PDVLFPADSEH- 286
Query: 362 NNESDGRGR---------DGTKEIDVEKFVQ 383
N + R D +K I V++ +Q
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 80
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIK 140
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
HN G+++RD+K ENI+I N G + L+DF
Sbjct: 174 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 202
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
SG L+D V+ F GT Y PE I + H
Sbjct: 203 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 235
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
+ WSLG++L++M+ G PF R + F+R + ++LIR L
Sbjct: 236 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLA 287
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
P+ R EEI+ H + + V
Sbjct: 288 LRPSDRPTFEEIQNHPWMQDV 308
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
HN G+++RD+K ENI+I N G + L+DF
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 187
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
SG L+D V+ F GT Y PE I + H
Sbjct: 188 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 220
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
+ WSLG++L++M+ G PF R + F+R + ++LIR L
Sbjct: 221 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLA 272
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
P+ R EEI+ H + + V
Sbjct: 273 LRPSDRPTFEEIQNHPWMQDV 293
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 29/151 (19%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+V T Y APE+I G G+ VD WS+G ++ EM+ G F G+ + + +++ +
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI----EQ 240
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHE 361
+G P+P +++L PT R VE + G ++E L P++ PA EH
Sbjct: 241 LGTPSP--EFMKKL---QPTVRTYVE---NRPKYAGYSFEKLF-----PDVLFPADSEH- 286
Query: 362 NNESDGRGR---------DGTKEIDVEKFVQ 383
N + R D +K I V++ +Q
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKVV 80
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIK 140
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
HN G+++RD+K ENI+I N G + L+DF
Sbjct: 146 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 174
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
SG L+D V+ F GT Y PE I + H
Sbjct: 175 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 207
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
+ WSLG++L++M+ G PF R + F+R + ++LIR L
Sbjct: 208 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLA 259
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
P+ R EEI+ H + + V
Sbjct: 260 LRPSDRPTFEEIQNHPWMQDV 280
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
HN G+++RD+K ENI+I N G + L+DF
Sbjct: 147 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 175
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
SG L+D V+ F GT Y PE I + H
Sbjct: 176 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 208
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
+ WSLG++L++M+ G PF R + F+R + ++LIR L
Sbjct: 209 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLA 260
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
P+ R EEI+ H + + V
Sbjct: 261 LRPSDRPTFEEIQNHPWMQDV 281
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
HN G+++RD+K ENI+I N G + L+DF
Sbjct: 174 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 202
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
SG L+D V+ F GT Y PE I + H
Sbjct: 203 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 235
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
+ WSLG++L++M+ G PF R + F+R + ++LIR L
Sbjct: 236 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLA 287
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
P+ R EEI+ H + + V
Sbjct: 288 LRPSDRPTFEEIQNHPWMQDV 308
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 29/151 (19%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+V T Y APE+I G G+ VD WS+G ++ EM+ G F G+ + + +++ +
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI----EQ 240
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHE 361
+G P P +++L PT R VE + G ++E L P++ PA EH
Sbjct: 241 LGTPCP--EFMKKL---QPTVRTYVE---NRPKYAGYSFEKLF-----PDVLFPADSEH- 286
Query: 362 NNESDGRGR---------DGTKEIDVEKFVQ 383
N + R D +K I V++ +Q
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 80
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 140
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 113/315 (35%), Gaps = 76/315 (24%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LGRG+ G V ++D ++ A+K + ++ +++EL +
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVF--RAEELM----------------ACAGL 142
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
P + L G + +V ++ G L L K+Q +D +
Sbjct: 143 TSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQG--CLPEDRALYYLGQALEGLEY 200
Query: 144 XHNMGIVYRDLKPENIMIQENG-HIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKR 202
H+ I++ D+K +N+++ +G H L DF + L P K++L +
Sbjct: 201 LHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQ---PDGLGKSLLTGD-------- 249
Query: 203 RSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHD 262
GTE ++APE++ G+ D
Sbjct: 250 ----------------------------------------YIPGTETHMAPEVVLGRSCD 269
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP---TPLR-NLIRRLL 318
VD WS ++ ML G P+ R +I PP + P PL I+ L
Sbjct: 270 AKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEGL 329
Query: 319 EKDPTKRIGVEEIKG 333
K+P R+ E+ G
Sbjct: 330 RKEPIHRVSAAELGG 344
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 29/151 (19%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+V T Y APE+I G G+ VD WS+G ++ EM+ G F G+ + + +++ +
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI----EQ 240
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHE 361
+G P+P +++L PT R VE + G ++E L P++ PA EH
Sbjct: 241 LGTPSP--EFMKKL---QPTVRTYVE---NRPKYAGYSFEKLF-----PDVLFPADSEH- 286
Query: 362 NNESDGRGR---------DGTKEIDVEKFVQ 383
N + R D +K I V++ +Q
Sbjct: 287 NKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKVV 80
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIK 140
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 29/151 (19%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+V T Y APE+I G G+ VD WS+G ++ EM+ G F G+ + + +++ +
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI----EQ 241
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHE 361
+G P P +++L PT R VE + G ++E L P++ PA EH
Sbjct: 242 LGTPCP--EFMKKL---QPTVRTYVE---NRPKYAGYSFEKLF-----PDVLFPADSEH- 287
Query: 362 NNESDGRGR---------DGTKEIDVEKFVQ 383
N + R D +K I V++ +Q
Sbjct: 288 NKLKASQARDLLSKMLVIDASKRISVDEALQ 318
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 81
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 82 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 141
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 142 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
HN G+++RD+K ENI+I N G + L+DF
Sbjct: 132 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 160
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
SG L+D V+ F GT Y PE I + H
Sbjct: 161 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 193
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
+ WSLG++L++M+ G PF R + F+R + ++LIR L
Sbjct: 194 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLA 245
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
P+ R EEI+ H + + V
Sbjct: 246 LRPSDRPTFEEIQNHPWMQDV 266
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
HN G+++RD+K ENI+I N G + L+DF
Sbjct: 132 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 160
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
SG L+D V+ F GT Y PE I + H
Sbjct: 161 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 193
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
+ WSLG++L++M+ G PF R + F+R + ++LIR L
Sbjct: 194 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLA 245
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
P+ R EEI+ H + + V
Sbjct: 246 LRPSDRPTFEEIQNHPWMQDV 266
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
HN G+++RD+K ENI+I N G + L+DF
Sbjct: 131 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 159
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
SG L+D V+ F GT Y PE I + H
Sbjct: 160 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 192
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
+ WSLG++L++M+ G PF R + F+R + ++LIR L
Sbjct: 193 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLA 244
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
P+ R EEI+ H + + V
Sbjct: 245 LRPSDRPTFEEIQNHPWMQDV 265
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
HN G+++RD+K ENI+I N G + L+DF
Sbjct: 131 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 159
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
SG L+D V+ F GT Y PE I + H
Sbjct: 160 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 192
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
+ WSLG++L++M+ G PF R + F+R + ++LIR L
Sbjct: 193 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLA 244
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
P+ R EEI+ H + + V
Sbjct: 245 LRPSDRPTFEEIQNHPWMQDV 265
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
HN G+++RD+K ENI+I N G + L+DF
Sbjct: 166 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 194
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
SG L+D V+ F GT Y PE I + H
Sbjct: 195 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 227
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
+ WSLG++L++M+ G PF R + F+R + ++LIR L
Sbjct: 228 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLA 279
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
P+ R EEI+ H + + V
Sbjct: 280 LRPSDRPTFEEIQNHPWMQDV 300
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
HN G+++RD+K ENI+I N G + L+DF
Sbjct: 132 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 160
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
SG L+D V+ F GT Y PE I + H
Sbjct: 161 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 193
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
+ WSLG++L++M+ G PF R + F+R + ++LIR L
Sbjct: 194 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLA 245
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
P+ R EEI+ H + + V
Sbjct: 246 LRPSDRPTFEEIQNHPWMQDV 266
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 15/109 (13%)
Query: 245 VGTEEYVAPEIIEGKGHD-----------FAVDWWSLGVVLHEMLYGATPFRGSSRKETF 293
VGT Y+ PE I+ D WSLG +L+ M YG TPF+ + +
Sbjct: 189 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK 248
Query: 294 YRILCRPPDLVGEP----TPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
+ P + P L+++++ L++DP +RI + E+ H + +
Sbjct: 249 LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYR-RISFEQR 78
I+ +G G VF V + E + +A+K + + E +N D YR I++ +
Sbjct: 32 ILKQIGSGGSSKVFQVLN-EKKQIYAIKYV--------NLEEADNQTLDSYRNEIAYLNK 82
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFXXXXX 137
+ ++ + + RL TD+++ Y + C DL+S L+K++S + +
Sbjct: 83 LQQHSDKII--RLYDYEITDQYI-YMVMECGNIDLNSWLKKKKSIDPWERKS---YWKNM 136
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSP 180
H GIV+ DLKP N +I + G + L+DF ++ ++ P
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP 178
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K SK + + + R E R+L
Sbjct: 39 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSKPFQSIIHAKRTYR---ELRLL 87
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 144
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 249
Query: 303 LVGEP 307
LVG P
Sbjct: 250 LVGTP 254
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPF 284
FVGT +Y+APE++E K + VD+WS G + E + G PF
Sbjct: 184 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 61/146 (41%), Gaps = 19/146 (13%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G G V ++ E A+K R + K++E R E ++++ +
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQC-RQELSPKNRE-----------RWCLEIQIMKKL 70
Query: 84 EHPLLPRLRGV------LSTDKFVGYAIDYCPGRDLHSLRKQ-QSEQMFSDDTIRFXXXX 136
HP + R V L+ + A++YC G DL Q ++ + IR
Sbjct: 71 NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD 130
Query: 137 XXXXXXXXHNMGIVYRDLKPENIMIQ 162
H I++RDLKPENI++Q
Sbjct: 131 ISSALRYLHENRIIHRDLKPENIVLQ 156
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPF 284
FVGT +Y+APE++E K + VD+WS G + E + G PF
Sbjct: 183 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 61/146 (41%), Gaps = 19/146 (13%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LG G G V ++ E A+K R + K++E R E ++++ +
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQC-RQELSPKNRE-----------RWCLEIQIMKKL 69
Query: 84 EHPLLPRLRGV------LSTDKFVGYAIDYCPGRDLHSLRKQ-QSEQMFSDDTIRFXXXX 136
HP + R V L+ + A++YC G DL Q ++ + IR
Sbjct: 70 NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD 129
Query: 137 XXXXXXXXHNMGIVYRDLKPENIMIQ 162
H I++RDLKPENI++Q
Sbjct: 130 ISSALRYLHENRIIHRDLKPENIVLQ 155
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 47 LSPVGSGAYGSVCAAFDTKTGHRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 95
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 152
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 153 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 245 VGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL L
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----RL 258
Query: 304 VGEP 307
VG P
Sbjct: 259 VGTP 262
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGHRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
FV T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 182 FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 237
Query: 303 LVGEP 307
LVG P
Sbjct: 238 LVGTP 242
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGHRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
FV T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 182 FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 237
Query: 303 LVGEP 307
LVG P
Sbjct: 238 LVGTP 242
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 124/348 (35%), Gaps = 91/348 (26%)
Query: 2 NDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL 61
N +++D + S LG G G V + + + E FALK + ++ EL
Sbjct: 57 NAIIDDYKVTS---------QVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVEL 107
Query: 62 TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS 121
+ R S ++R V+ + + K + + G +L S + +
Sbjct: 108 --------HWRASQCPHIVRIVD-----VYENLYAGRKCLLIVXECLDGGELFSRIQDRG 154
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQE---NGHIMLVDFDLSTKL 178
+Q F++ H++ I +RD+KPEN++ N + L DF +
Sbjct: 155 DQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA--- 211
Query: 179 SPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXX 238
K +S SL P +
Sbjct: 212 -----------------------------KETTSHNSLTTPCY----------------- 225
Query: 239 XXXXXFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFR---------GSSR 289
T YVAPE++ + +D + D WSLGV+ + +L G PF G
Sbjct: 226 --------TPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKT 277
Query: 290 KETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
+ + P+ ++ LIR LL+ +PT+R + E H +
Sbjct: 278 RIRXGQYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWI 325
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
HN G+++RD+K ENI+I N G + L+DF
Sbjct: 130 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 158
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
SG L+D V+ F GT Y PE I + H
Sbjct: 159 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 191
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
+ WSLG++L++M+ G PF R + F+R + ++LIR L
Sbjct: 192 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLA 243
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
P+ R EEI+ H + + V
Sbjct: 244 LRPSDRPTFEEIQNHPWMQDV 264
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 121/366 (33%), Gaps = 122/366 (33%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S LG G GVVF V S V+ R LI + K N +I E +VL
Sbjct: 73 ISELGAGNGGVVFKVSHKPSG-----LVMARKLIHLEIKPAIRN-------QIIRELQVL 120
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS---EQMFSDDTIRFXXXXX 137
P + G +D + +++ G L + K+ EQ+ +I
Sbjct: 121 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 180
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
I++RD+KP NI++ G I L DF +S +L AN+
Sbjct: 181 YLREKHK----IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----------ANSFV 226
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
G RS++S PE ++
Sbjct: 227 GT---RSYMS---------------------------------------------PERLQ 238
Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKE-------------------------- 291
G + D WS+G+ L EM G P KE
Sbjct: 239 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 298
Query: 292 -TFYRILCRPP--------DLVGEPTP----------LRNLIRRLLEKDPTKRIGVEEIK 332
+ Y + RPP +V EP P ++ + + L K+P +R ++++
Sbjct: 299 LSSYGMDSRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLM 358
Query: 333 GHEFFK 338
H F K
Sbjct: 359 VHAFIK 364
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 94/263 (35%), Gaps = 65/263 (24%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E ++ +HP + RL GV++ K V +Y L S ++ Q F+ +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 154
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
+MG V+RDL NI+I N + DF LS L P+A A T
Sbjct: 155 GIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEA------AYTT 207
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
R G + P+ + +PE
Sbjct: 208 RGG------------------KIPIR----------------------------WTSPEA 221
Query: 256 IEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETF------YRILCRPPDLVGEPT 308
I + A D WS G+VL E M YG P+ S ++ YR+ PP + P
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPPM-DCPA 277
Query: 309 PLRNLIRRLLEKDPTKRIGVEEI 331
L L+ +KD R E+I
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQI 300
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 94/263 (35%), Gaps = 65/263 (24%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E ++ +HP + RL GV++ K V +Y L S ++ Q F+ +
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 125
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
+MG V+RDL NI+I N + DF LS L P+A A T
Sbjct: 126 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEA------AYTT 178
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
R G + P+ + +PE
Sbjct: 179 RGG------------------KIPIR----------------------------WTSPEA 192
Query: 256 IEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETF------YRILCRPPDLVGEPT 308
I + A D WS G+VL E M YG P+ S ++ YR+ PP + P
Sbjct: 193 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPPM-DCPA 248
Query: 309 PLRNLIRRLLEKDPTKRIGVEEI 331
L L+ +KD R E+I
Sbjct: 249 ALYQLMLDCWQKDRNNRPKFEQI 271
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 23 LSPVGSGAYGSVCAAFDTKTGHRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 71
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 128
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 178 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 233
Query: 303 LVGEP 307
LVG P
Sbjct: 234 LVGTP 238
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 23 LSPVGSGAYGSVCAAFDTKTGHRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 71
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 128
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
FV T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 178 FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 233
Query: 303 LVGEP 307
LVG P
Sbjct: 234 LVGTP 238
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGHRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 237
Query: 303 LVGEP 307
LVG P
Sbjct: 238 LVGTP 242
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 76/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
HN G+++RD+K ENI+I N G + L+DF
Sbjct: 127 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 155
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
SG L+D V+ F GT Y PE I + H
Sbjct: 156 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 188
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
+ WSLG++L++M+ G PF R + F+R + ++LIR L
Sbjct: 189 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLA 240
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
P+ R EEI+ H + + V
Sbjct: 241 LRPSDRPTFEEIQNHPWMQDV 261
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 46 LSPVGSGAYGSVCAAFDTKTGHRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 94
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 95 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 151
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 152 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 191
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 201 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 256
Query: 303 LVGEP 307
LVG P
Sbjct: 257 LVGTP 261
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 47 LSPVGSGAYGSVCAAFDTKTGHRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 95
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 152
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 153 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 202 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 257
Query: 303 LVGEP 307
LVG P
Sbjct: 258 LVGTP 262
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 121/366 (33%), Gaps = 122/366 (33%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S LG G GVVF V S V+ R LI + K N +I E +VL
Sbjct: 11 ISELGAGNGGVVFKVSHKPSG-----LVMARKLIHLEIKPAIRN-------QIIRELQVL 58
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS---EQMFSDDTIRFXXXXX 137
P + G +D + +++ G L + K+ EQ+ +I
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
I++RD+KP NI++ G I L DF +S +L AN+
Sbjct: 119 YLREKHK----IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----------ANSFV 164
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
G RS++S PE ++
Sbjct: 165 G---TRSYMS---------------------------------------------PERLQ 176
Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKE-------------------------- 291
G + D WS+G+ L EM G P KE
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 236
Query: 292 -TFYRILCRPP--------DLVGEPTP----------LRNLIRRLLEKDPTKRIGVEEIK 332
+ Y + RPP +V EP P ++ + + L K+P +R ++++
Sbjct: 237 LSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 296
Query: 333 GHEFFK 338
H F K
Sbjct: 297 VHAFIK 302
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 33 LSPVGSGAYGSVCAAFDTKTGHRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 81
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 138
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 243
Query: 303 LVGEP 307
LVG P
Sbjct: 244 LVGTP 248
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 27/169 (15%)
Query: 16 SCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWR----DLIEKKSKELTNNDNGDKYR 71
+ R + +G GA G V D + A+K ++R +L K++ YR
Sbjct: 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRA-----------YR 73
Query: 72 RISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYC-----PGRDLHSLRKQQSEQMFS 126
E R+L+++ H + L V + D+ + D+ G DL L K +
Sbjct: 74 ----ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK---LG 126
Query: 127 DDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+D I+F H GI++RDLKP N+ + E+ + ++DF L+
Sbjct: 127 EDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA 175
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 33/130 (25%)
Query: 245 VGTEEYVAPEII-EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRP 300
V T Y APE+I + VD WS+G ++ EM+ G T F+GS + I+ P
Sbjct: 186 VVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTP 245
Query: 301 P----------------------------DLVGEPTPLR-NLIRRLLEKDPTKRIGVEEI 331
P ++ +PL NL+ ++L D +R+ E
Sbjct: 246 PAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEA 305
Query: 332 KGHEFFKGVN 341
H +F+ ++
Sbjct: 306 LAHPYFESLH 315
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 121/366 (33%), Gaps = 122/366 (33%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S LG G GVVF V S V+ R LI + K N +I E +VL
Sbjct: 11 ISELGAGNGGVVFKVSHKPSG-----LVMARKLIHLEIKPAIRN-------QIIRELQVL 58
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS---EQMFSDDTIRFXXXXX 137
P + G +D + +++ G L + K+ EQ+ +I
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
I++RD+KP NI++ G I L DF +S +L AN+
Sbjct: 119 YLREKHK----IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----------ANSFV 164
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
G RS++S PE ++
Sbjct: 165 G---TRSYMS---------------------------------------------PERLQ 176
Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKE-------------------------- 291
G + D WS+G+ L EM G P KE
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 236
Query: 292 -TFYRILCRPP--------DLVGEPTP----------LRNLIRRLLEKDPTKRIGVEEIK 332
+ Y + RPP +V EP P ++ + + L K+P +R ++++
Sbjct: 237 LSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 296
Query: 333 GHEFFK 338
H F K
Sbjct: 297 VHAFIK 302
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 94/263 (35%), Gaps = 65/263 (24%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E ++ +HP + RL GV++ K V +Y L S ++ Q F+ +
Sbjct: 84 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 142
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
+MG V+RDL NI+I N + DF LS L P+A A T
Sbjct: 143 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEA------AYTT 195
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
R G + P+ + +PE
Sbjct: 196 RGG------------------KIPIR----------------------------WTSPEA 209
Query: 256 IEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETF------YRILCRPPDLVGEPT 308
I + A D WS G+VL E M YG P+ S ++ YR+ PP + P
Sbjct: 210 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPPM-DCPA 265
Query: 309 PLRNLIRRLLEKDPTKRIGVEEI 331
L L+ +KD R E+I
Sbjct: 266 ALYQLMLDCWQKDRNNRPKFEQI 288
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVG 305
GTE ++APE++ G+ D VD WS ++ ML G P+ R +I PP +
Sbjct: 234 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVRE 293
Query: 306 EP---TPLR-NLIRRLLEKDPTKRIGVEEIKG 333
P PL I+ L K+P R+ E+ G
Sbjct: 294 IPPSCAPLTAQAIQEGLRKEPIHRVSAAELGG 325
Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 64/158 (40%), Gaps = 21/158 (13%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
LGRG+ G V ++D ++ A+K + ++ +++EL +
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVF--RAEELM----------------ACAGL 123
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXX 143
P + L G + +V ++ G L L K+Q +D +
Sbjct: 124 TSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQG--CLPEDRALYYLGQALEGLEY 181
Query: 144 XHNMGIVYRDLKPENIMIQENG-HIMLVDFDLSTKLSP 180
H+ I++ D+K +N+++ +G H L DF + L P
Sbjct: 182 LHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQP 219
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 75/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
HN G+++RD+K ENI+I N G + L+DF
Sbjct: 146 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 174
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
SG L+D V+ F GT Y PE I + H
Sbjct: 175 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 207
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
+ WSLG++L++M+ G PF R + F+R ++LIR L
Sbjct: 208 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------XECQHLIRWCLA 259
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
P+ R EEI+ H + + V
Sbjct: 260 LRPSDRPTFEEIQNHPWMQDV 280
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 19/159 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDL 174
H+ I++RDLKP N+ + E+ + ++DF L
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGL 171
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 237
Query: 303 LVGEP 307
LVG P
Sbjct: 238 LVGTP 242
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 121/366 (33%), Gaps = 122/366 (33%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S LG G GVVF V S V+ R LI + K N +I E +VL
Sbjct: 11 ISELGAGNGGVVFKVSHKPSG-----LVMARKLIHLEIKPAIRN-------QIIRELQVL 58
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS---EQMFSDDTIRFXXXXX 137
P + G +D + +++ G L + K+ EQ+ +I
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
I++RD+KP NI++ G I L DF +S +L AN+
Sbjct: 119 YLREKHK----IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----------ANSFV 164
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
G RS++S PE ++
Sbjct: 165 G---TRSYMS---------------------------------------------PERLQ 176
Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKE-------------------------- 291
G + D WS+G+ L EM G P KE
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 236
Query: 292 -TFYRILCRPP--------DLVGEPTP----------LRNLIRRLLEKDPTKRIGVEEIK 332
+ Y + RPP +V EP P ++ + + L K+P +R ++++
Sbjct: 237 LSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 296
Query: 333 GHEFFK 338
H F K
Sbjct: 297 VHAFIK 302
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 121/366 (33%), Gaps = 122/366 (33%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S LG G GVVF V S V+ R LI + K N +I E +VL
Sbjct: 11 ISELGAGNGGVVFKVSHKPSG-----LVMARKLIHLEIKPAIRN-------QIIRELQVL 58
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS---EQMFSDDTIRFXXXXX 137
P + G +D + +++ G L + K+ EQ+ +I
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 118
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
I++RD+KP NI++ G I L DF +S +L AN+
Sbjct: 119 YLREKHK----IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----------ANSFV 164
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
G RS++S PE ++
Sbjct: 165 G---TRSYMS---------------------------------------------PERLQ 176
Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKE-------------------------- 291
G + D WS+G+ L EM G P KE
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 236
Query: 292 -TFYRILCRPP--------DLVGEPTP----------LRNLIRRLLEKDPTKRIGVEEIK 332
+ Y + RPP +V EP P ++ + + L K+P +R ++++
Sbjct: 237 LSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 296
Query: 333 GHEFFK 338
H F K
Sbjct: 297 VHAFIK 302
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 245 VGTEEYVAPEIIEGKGHDFA--VDWWSLGVVLHEMLYGATPFRGSSRKETFYRI----LC 298
GT +VAPE++ + D WS GV+LH +L GA PF G + +T ++ LC
Sbjct: 235 AGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLC 294
Query: 299 RPPDLVGEPTPL-RNLIRRLLEKDPTKR 325
+PL R+L+ LL ++ +R
Sbjct: 295 FENPNYNVLSPLARDLLSNLLNRNVDER 322
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 76/198 (38%), Gaps = 58/198 (29%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
A+G+G+ GVV + + ++ A+K++ ++ I + N RI E R+++
Sbjct: 33 AIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQI--------NPKDVERIKTEVRLMKK 84
Query: 83 VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL----------------------------- 113
+ HP + RL V ++++ ++ C G L
Sbjct: 85 LHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPE 144
Query: 114 ----------HSLRKQ----QSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENI 159
H R+ Q E++ S+ HN GI +RD+KPEN
Sbjct: 145 CNEEAINGSIHGFRESLDFVQREKLISN-----IMRQIFSALHYLHNQGICHRDIKPENF 199
Query: 160 MIQENG--HIMLVDFDLS 175
+ N I LVDF LS
Sbjct: 200 LFSTNKSFEIKLVDFGLS 217
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 75/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
HN G+++RD+K ENI+I N G + L+DF
Sbjct: 147 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 175
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
SG L+D V+ F GT Y PE I + H
Sbjct: 176 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 208
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
+ WSLG++L++M+ G PF R + F+R ++LIR L
Sbjct: 209 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------XECQHLIRWCLA 260
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
P+ R EEI+ H + + V
Sbjct: 261 LRPSDRPTFEEIQNHPWMQDV 281
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGHRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLA 172
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 237
Query: 303 LVGEP 307
LVG P
Sbjct: 238 LVGTP 242
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 75/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
HN G+++RD+K ENI+I N G + L+DF
Sbjct: 174 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 202
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
SG L+D V+ F GT Y PE I + H
Sbjct: 203 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 235
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
+ WSLG++L++M+ G PF R + F+R ++LIR L
Sbjct: 236 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------XECQHLIRWCLA 287
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
P+ R EEI+ H + + V
Sbjct: 288 LRPSDRPTFEEIQNHPWMQDV 308
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/366 (21%), Positives = 119/366 (32%), Gaps = 122/366 (33%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S LG G GVVF V S V+ R LI + K N +I E +VL
Sbjct: 38 ISELGAGNGGVVFKVSHKPSG-----LVMARKLIHLEIKPAIRN-------QIIRELQVL 85
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS---EQMFSDDTIRFXXXXX 137
P + G +D + +++ G L + K+ EQ+ +I
Sbjct: 86 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT 145
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
I++RD+KP NI++ G I L DF +S +L AN+
Sbjct: 146 YLREKHK----IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----------ANSFV 191
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
G RS++S PE ++
Sbjct: 192 GT---RSYMS---------------------------------------------PERLQ 203
Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC------------------- 298
G + D WS+G+ L EM G P KE C
Sbjct: 204 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 263
Query: 299 --------RPP--------DLVGEPTP----------LRNLIRRLLEKDPTKRIGVEEIK 332
RPP +V EP P ++ + + L K+P +R ++++
Sbjct: 264 LNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 323
Query: 333 GHEFFK 338
H F K
Sbjct: 324 VHAFIK 329
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 94/263 (35%), Gaps = 65/263 (24%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E ++ +HP + RL GV++ K V +Y L S ++ Q F+ +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 154
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
+MG V+RDL NI+I N + DF LS L P+A A T
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEA------AYTT 207
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
R G + P+ + +PE
Sbjct: 208 RGG------------------KIPIR----------------------------WTSPEA 221
Query: 256 IEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETF------YRILCRPPDLVGEPT 308
I + A D WS G+VL E M YG P+ S ++ YR+ PP + P
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPPM-DCPA 277
Query: 309 PLRNLIRRLLEKDPTKRIGVEEI 331
L L+ +KD R E+I
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQI 300
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 237
Query: 303 LVGEP 307
LVG P
Sbjct: 238 LVGTP 242
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 94/263 (35%), Gaps = 65/263 (24%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E ++ +HP + RL GV++ K V +Y L S ++ Q F+ +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 154
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
+MG V+RDL NI+I N + DF LS L P+A A T
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEA------AYTT 207
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
R G + P+ + +PE
Sbjct: 208 RGG------------------KIPIR----------------------------WTSPEA 221
Query: 256 IEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETF------YRILCRPPDLVGEPT 308
I + A D WS G+VL E M YG P+ S ++ YR+ PP + P
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPPM-DCPA 277
Query: 309 PLRNLIRRLLEKDPTKRIGVEEI 331
L L+ +KD R E+I
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQI 300
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 94/263 (35%), Gaps = 65/263 (24%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E ++ +HP + RL GV++ K V +Y L S ++ Q F+ +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 154
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
+MG V+RDL NI+I N + DF LS L P+A A T
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEA------AYTT 207
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
R G + P+ + +PE
Sbjct: 208 RGG------------------KIPIR----------------------------WTSPEA 221
Query: 256 IEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETF------YRILCRPPDLVGEPT 308
I + A D WS G+VL E M YG P+ S ++ YR+ PP + P
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPPM-DCPA 277
Query: 309 PLRNLIRRLLEKDPTKRIGVEEI 331
L L+ +KD R E+I
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQI 300
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 172
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 237
Query: 303 LVGEP 307
LVG P
Sbjct: 238 LVGTP 242
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 29 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 77
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 134
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA 174
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 239
Query: 303 LVGEP 307
LVG P
Sbjct: 240 LVGTP 244
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 33 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 81
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 138
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA 178
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 243
Query: 303 LVGEP 307
LVG P
Sbjct: 244 LVGTP 248
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 75/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
HN G+++RD+K ENI+I N G + L+DF
Sbjct: 179 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 207
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
SG L+D V+ F GT Y PE I + H
Sbjct: 208 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 240
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
+ WSLG++L++M+ G PF R + F+R ++LIR L
Sbjct: 241 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------XECQHLIRWCLA 292
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
P+ R EEI+ H + + V
Sbjct: 293 LRPSDRPTFEEIQNHPWMQDV 313
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/364 (19%), Positives = 120/364 (32%), Gaps = 125/364 (34%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G+V D + A+K I + ++ QR L
Sbjct: 30 LSYIGEGAYGMVCSAYDNVNKVRVAIKKI------------------SPFEHQTYCQRTL 71
Query: 81 RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R ++ L R ++ + + Y + DL+ L K Q S+D I
Sbjct: 72 REIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 128
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
+ H+ +++RDLKP N+++ + + DF L+ P
Sbjct: 129 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPD--------- 179
Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEY 250
FL+++ V T Y
Sbjct: 180 ---------HDHTGFLTEY-----------------------------------VATRWY 195
Query: 251 VAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT- 308
APEI + KG+ ++D WS+G +L EML F G + IL ++G P+
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPSQ 251
Query: 309 ------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIKG 333
P +N L+ ++L +P KRI VE+
Sbjct: 252 EDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 311
Query: 334 HEFF 337
H +
Sbjct: 312 HPYL 315
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 94/263 (35%), Gaps = 65/263 (24%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E ++ +HP + RL GV++ K V +Y L S ++ Q F+ +
Sbjct: 94 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 152
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
+MG V+RDL NI+I N + DF LS L P+A A T
Sbjct: 153 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEA------AYTT 205
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
R G + P+ + +PE
Sbjct: 206 RGG------------------KIPIR----------------------------WTSPEA 219
Query: 256 IEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETF------YRILCRPPDLVGEPT 308
I + A D WS G+VL E M YG P+ S ++ YR+ PP + P
Sbjct: 220 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPPM-DCPA 275
Query: 309 PLRNLIRRLLEKDPTKRIGVEEI 331
L L+ +KD R E+I
Sbjct: 276 ALYQLMLDCWQKDRNNRPKFEQI 298
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 94/263 (35%), Gaps = 65/263 (24%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E ++ +HP + RL GV++ K V +Y L S ++ Q F+ +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 154
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
+MG V+RDL NI+I N + DF LS L P+A A T
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEA------AYTT 207
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
R G + P+ + +PE
Sbjct: 208 RGG------------------KIPIR----------------------------WTSPEA 221
Query: 256 IEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETF------YRILCRPPDLVGEPT 308
I + A D WS G+VL E M YG P+ S ++ YR+ PP + P
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPPM-DCPA 277
Query: 309 PLRNLIRRLLEKDPTKRIGVEEI 331
L L+ +KD R E+I
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQI 300
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 32 LSPIGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 80
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 137
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 177
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 242
Query: 303 LVGEP 307
LVG P
Sbjct: 243 LVGTP 247
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 50 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 98
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 99 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 155
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 156 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 195
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 205 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 260
Query: 303 LVGEP 307
LVG P
Sbjct: 261 LVGTP 265
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 44/181 (24%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRS 204
H+ G+++RDLKP NI + + + DF L T + + + T + A R +
Sbjct: 135 HSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQ---- 190
Query: 205 FLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDFA 264
VGT+ Y++PE I G +
Sbjct: 191 ----------------------------------------VGTKLYMSPEQIHGNSYSHK 210
Query: 265 VDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRNLIRRLLEKDPTK 324
VD +SLG++L E+LY + R T R L PP + +++ +L P +
Sbjct: 211 VDIFSLGLILFELLYPFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPME 270
Query: 325 R 325
R
Sbjct: 271 R 271
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/370 (20%), Positives = 128/370 (34%), Gaps = 113/370 (30%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL-------------------TN 63
LG G+ G+V V D+ES + FALK + +D K++EL T
Sbjct: 14 TLGTGSFGIVCEVFDIESGKRFALKKVLQD-PRYKNRELDIMKVLDHVNIIKLVDYFYTT 72
Query: 64 NDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL---STDKFVGYAIDYCPGRDLHSLRKQ- 119
D K + + L + + + V+ S +K++ ++Y P LH + K
Sbjct: 73 GDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSF 131
Query: 120 -QSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTK 177
+S + + I H++GI +RD+KP+N+++ + + L DF + K
Sbjct: 132 IRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKK 191
Query: 178 LSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXX 237
L P P + S+F +
Sbjct: 192 LIPSEPSVA-----------------XICSRFYRA------------------------- 209
Query: 238 XXXXXXFVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL 297
+G EY ++D WS+G V E++ G F G + + RI+
Sbjct: 210 ---PELMLGATEYTP-----------SIDLWSIGCVFGELILGKPLFSGETSIDQLVRII 255
Query: 298 --------------------CRPPDLV----------GEPTPLRNLIRRLLEKDPTKRIG 327
R P L G P+ +L+ ++L +P RI
Sbjct: 256 QIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRIN 315
Query: 328 VEEIKGHEFF 337
E H FF
Sbjct: 316 PYEAMAHPFF 325
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
++ +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 37 LAPVGSGAYGSVCAAFDTKTGHRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 85
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 86 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 142
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 143 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 182
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 192 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 247
Query: 303 LVGEP 307
LVG P
Sbjct: 248 LVGTP 252
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 38 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 86
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 87 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 143
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 144 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 183
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 193 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 248
Query: 303 LVGEP 307
LVG P
Sbjct: 249 LVGTP 253
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/364 (19%), Positives = 120/364 (32%), Gaps = 125/364 (34%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G+V D + A+K I + ++ QR L
Sbjct: 30 LSYIGEGAYGMVCSAYDNVNKVRVAIKKI------------------SPFEHQTYCQRTL 71
Query: 81 RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R ++ L R ++ + + Y + DL+ L K Q S+D I
Sbjct: 72 REIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 128
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
+ H+ +++RDLKP N+++ + + DF L+ P
Sbjct: 129 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD--------- 179
Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEY 250
FL+++ V T Y
Sbjct: 180 ---------HDHTGFLTEY-----------------------------------VATRWY 195
Query: 251 VAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT- 308
APEI + KG+ ++D WS+G +L EML F G + IL ++G P+
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPSQ 251
Query: 309 ------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIKG 333
P +N L+ ++L +P KRI VE+
Sbjct: 252 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 311
Query: 334 HEFF 337
H +
Sbjct: 312 HPYL 315
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 34 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 82
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 139
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 244
Query: 303 LVGEP 307
LVG P
Sbjct: 245 LVGTP 249
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 39 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 87
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 144
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 249
Query: 303 LVGEP 307
LVG P
Sbjct: 250 LVGTP 254
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 29 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 77
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 134
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 239
Query: 303 LVGEP 307
LVG P
Sbjct: 240 LVGTP 244
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 39 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 87
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 144
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 184
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 249
Query: 303 LVGEP 307
LVG P
Sbjct: 250 LVGTP 254
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 24 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 72
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 73 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 129
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 130 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 169
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 179 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 234
Query: 303 LVGEP 307
LVG P
Sbjct: 235 LVGTP 239
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 25 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 73
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 74 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 130
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 131 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 170
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 180 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 235
Query: 303 LVGEP 307
LVG P
Sbjct: 236 LVGTP 240
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 237
Query: 303 LVGEP 307
LVG P
Sbjct: 238 LVGTP 242
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 38 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 86
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 87 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 143
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 144 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 183
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 193 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 248
Query: 303 LVGEP 307
LVG P
Sbjct: 249 LVGTP 253
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 237
Query: 303 LVGEP 307
LVG P
Sbjct: 238 LVGTP 242
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 46 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 94
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 95 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 151
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 152 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 191
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 201 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 256
Query: 303 LVGEP 307
LVG P
Sbjct: 257 LVGTP 261
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 75/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
HN G+++RD+K ENI+I N G + L+DF
Sbjct: 127 HNXGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 155
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
SG L+D V+ F GT Y PE I + H
Sbjct: 156 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 188
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
+ WSLG++L++M+ G PF R + F+R ++LIR L
Sbjct: 189 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------XECQHLIRWCLA 240
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
P+ R EEI+ H + + V
Sbjct: 241 LRPSDRPTFEEIQNHPWMQDV 261
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V +F K R ++K S+ + + + R E R+L
Sbjct: 29 LSPVGSGAYGSV--------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLL 77
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 134
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 239
Query: 303 LVGEP 307
LVG P
Sbjct: 240 LVGTP 244
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 245 VGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL L
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----RL 238
Query: 304 VGEP 307
VG P
Sbjct: 239 VGTP 242
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 29 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 77
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 134
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 239
Query: 303 LVGEP 307
LVG P
Sbjct: 240 LVGTP 244
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 24 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 72
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 73 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 129
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 130 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 169
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 179 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 234
Query: 303 LVGEP 307
LVG P
Sbjct: 235 LVGTP 239
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V +F K R ++K S+ + + + R E R+L
Sbjct: 50 LSPVGSGAYGSV--------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLL 98
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 99 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 155
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 156 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 195
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 205 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 260
Query: 303 LVGEP 307
LVG P
Sbjct: 261 LVGTP 265
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 237
Query: 303 LVGEP 307
LVG P
Sbjct: 238 LVGTP 242
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 237
Query: 303 LVGEP 307
LVG P
Sbjct: 238 LVGTP 242
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V +F K R ++K S+ + + + R E R+L
Sbjct: 27 LSPVGSGAYGSV--------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 182 YVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 237
Query: 303 LVGEP 307
LVG P
Sbjct: 238 LVGTP 242
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 34 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 82
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 139
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 244
Query: 303 LVGEP 307
LVG P
Sbjct: 245 LVGTP 249
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 34 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 82
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 139
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 244
Query: 303 LVGEP 307
LVG P
Sbjct: 245 LVGTP 249
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 23 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 71
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 128
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 178 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 233
Query: 303 LVGEP 307
LVG P
Sbjct: 234 LVGTP 238
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 34 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 82
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 139
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 244
Query: 303 LVGEP 307
LVG P
Sbjct: 245 LVGTP 249
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 47 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 95
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 152
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 153 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 202 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 257
Query: 303 LVGEP 307
LVG P
Sbjct: 258 LVGTP 262
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 32 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 80
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 137
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 177
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 242
Query: 303 LVGEP 307
LVG P
Sbjct: 243 LVGTP 247
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 33 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 81
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 138
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 243
Query: 303 LVGEP 307
LVG P
Sbjct: 244 LVGTP 248
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 33 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 81
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 138
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 243
Query: 303 LVGEP 307
LVG P
Sbjct: 244 LVGTP 248
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 32 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 80
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 137
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 177
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 242
Query: 303 LVGEP 307
LVG P
Sbjct: 243 LVGTP 247
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 237
Query: 303 LVGEP 307
LVG P
Sbjct: 238 LVGTP 242
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 26 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 74
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 75 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 131
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 132 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 171
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 181 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 236
Query: 303 LVGEP 307
LVG P
Sbjct: 237 LVGTP 241
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 237
Query: 303 LVGEP 307
LVG P
Sbjct: 238 LVGTP 242
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 237
Query: 303 LVGEP 307
LVG P
Sbjct: 238 LVGTP 242
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 75/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
HN G+++RD+K ENI+I N G + L+DF
Sbjct: 154 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 182
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
SG L+D V+ F GT Y PE I + H
Sbjct: 183 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 215
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
+ WSLG++L++M+ G PF R + F+R ++LIR L
Sbjct: 216 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------XECQHLIRWCLA 267
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
P+ R EEI+ H + + V
Sbjct: 268 LRPSDRPTFEEIQNHPWMQDV 288
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 29/150 (19%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV 304
V T Y APE+I G G+ VD WS+G ++ EM+ G F G+ + + +++ + +
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI----EQL 241
Query: 305 GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHEN 362
G P P +++L PT R VE + G ++E L P++ PA EH N
Sbjct: 242 GTPCP--EFMKKL---QPTVRTYVE---NRPKYAGYSFEKLF-----PDVLFPADSEH-N 287
Query: 363 NESDGRGR---------DGTKEIDVEKFVQ 383
+ R D +K I V++ +Q
Sbjct: 288 ALKASQARDLLSKMLVIDASKRISVDEALQ 317
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 80
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 140
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 32 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 80
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 137
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA 177
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 242
Query: 303 LVGEP 307
LVG P
Sbjct: 243 LVGTP 247
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 74/201 (36%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
HN G+++RD+K ENI+I N G + L+DF
Sbjct: 147 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 175
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
SG L+D V+ F GT Y PE I + H
Sbjct: 176 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 208
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS---RKETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
+ WSLG++L++M+ G PF R + F+R ++LIR L
Sbjct: 209 RSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------XECQHLIRWCLA 260
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
P R EEI+ H + + V
Sbjct: 261 LRPXDRPTFEEIQNHPWMQDV 281
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 90/232 (38%), Gaps = 72/232 (31%)
Query: 145 HNMGIVYRDLKPENIMIQ-ENGH----IMLVDFDLSTKLSPKTPQASPKTVLAANTRSGI 199
H++ IV+RDLKP NI+I N H M+ DF L KL A R
Sbjct: 135 HSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL--------------AVGRHSF 180
Query: 200 KKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGK 259
+R SG+ GTE ++APE++
Sbjct: 181 SRR---------SGVP------------------------------GTEGWIAPEMLSED 201
Query: 260 GHD---FAVDWWSLGVVLHEMLY-GATPFRGSSRKET-----FYRILCRPPDLVGEPTPL 310
+ + VD +S G V + ++ G+ PF S +++ + C P+ E
Sbjct: 202 CKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPE-KHEDVIA 260
Query: 311 RNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHEN 362
R LI +++ DP KR + + H FF W L ++ ++ R E E+
Sbjct: 261 RELIEKMIAMDPQKRPSAKHVLKHPFF----WSLEKQLQFFQDVSDRIEKES 308
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/365 (19%), Positives = 121/365 (33%), Gaps = 125/365 (34%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G+V D + A+K I + ++ QR L
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKI------------------SPFEHQTYXQRTL 73
Query: 81 RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R ++ L R ++ + + Y + DL+ L K Q S+D I
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 130
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
+ H+ +++RDLKP N+++ + + DF L+ P
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD--------- 181
Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEY 250
FL+++ V T Y
Sbjct: 182 ---------HDHTGFLTEY-----------------------------------VATRWY 197
Query: 251 VAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT- 308
APEI + KG+ ++D WS+G +L EML F G + IL ++G P+
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPSQ 253
Query: 309 ------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIKG 333
P +N L+ ++L +P KRI VE+
Sbjct: 254 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313
Query: 334 HEFFK 338
H + +
Sbjct: 314 HPYLE 318
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 94/263 (35%), Gaps = 65/263 (24%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E ++ +HP + RL GV++ K V +Y L S ++ Q F+ +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 154
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
+MG V+RDL NI+I N + DF L+ L P+A A T
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLE-DDPEA------AYTT 207
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
R G + P+ + +PE
Sbjct: 208 RGG------------------KIPIR----------------------------WTSPEA 221
Query: 256 IEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETF------YRILCRPPDLVGEPT 308
I + A D WS G+VL E M YG P+ S ++ YR+ PP + P
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPPM-DCPA 277
Query: 309 PLRNLIRRLLEKDPTKRIGVEEI 331
L L+ +KD R E+I
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQI 300
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 75/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
HN G+++RD+K ENI+I N G + L+DF
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 188
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
SG L+D V+ F GT Y PE I + H
Sbjct: 189 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 221
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSR---KETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
+ WSLG++L++M+ G PF + F+R + ++LIR L
Sbjct: 222 RSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS--------SECQHLIRWCLA 273
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
P+ R EEI+ H + + V
Sbjct: 274 LRPSDRPTFEEIQNHPWMQDV 294
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 75/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
HN G+++RD+K ENI+I N G + L+DF
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 188
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
SG L+D V+ F GT Y PE I + H
Sbjct: 189 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 221
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSR---KETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
+ WSLG++L++M+ G PF + F+R + ++LIR L
Sbjct: 222 RSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS--------SECQHLIRWCLA 273
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
P+ R EEI+ H + + V
Sbjct: 274 LRPSDRPTFEEIQNHPWMQDV 294
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 75/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
HN G+++RD+K ENI+I N G + L+DF
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 187
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
SG L+D V+ F GT Y PE I + H
Sbjct: 188 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 220
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSR---KETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
+ WSLG++L++M+ G PF + F+R + ++LIR L
Sbjct: 221 RSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS--------SECQHLIRWCLA 272
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
P+ R EEI+ H + + V
Sbjct: 273 LRPSDRPTFEEIQNHPWMQDV 293
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 114/297 (38%), Gaps = 77/297 (25%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
I+ +G GA GVV + + + A+K I + ++ N +R E ++
Sbjct: 58 IIETIGNGAYGVVSSARRRLTGQQVAIKKI------PNAFDVVTNA-----KRTLRELKI 106
Query: 80 LRNVEHPLLPRLRGVLSTDKFVG-----YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXX 134
L++ +H + ++ +L G Y + DLH + S Q + + +R+
Sbjct: 107 LKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQI--IHSSQPLTLEHVRYFL 164
Query: 135 XXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAAN 194
H+ +++RDLKP N+++ EN + + DF ++ L SP
Sbjct: 165 YQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC-----TSP------- 212
Query: 195 TRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPE 254
+ + F+++ +V T Y APE
Sbjct: 213 -----AEHQYFMTE-----------------------------------YVATRWYRAPE 232
Query: 255 IIEGKGHDF--AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP 309
++ H++ A+D WS+G + EML F G + I+ ++G P+P
Sbjct: 233 LMLSL-HEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMM----VLGTPSP 284
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 75/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
HN G+++RD+K ENI+I N G + L+DF
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 187
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
SG L+D V+ F GT Y PE I + H
Sbjct: 188 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 220
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSR---KETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
+ WSLG++L++M+ G PF + F+R + ++LIR L
Sbjct: 221 RSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS--------SECQHLIRWCLA 272
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
P+ R EEI+ H + + V
Sbjct: 273 LRPSDRPTFEEIQNHPWMQDV 293
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 114/297 (38%), Gaps = 77/297 (25%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRV 79
I+ +G GA GVV + + + A+K I + ++ N +R E ++
Sbjct: 59 IIETIGNGAYGVVSSARRRLTGQQVAIKKI------PNAFDVVTNA-----KRTLRELKI 107
Query: 80 LRNVEHPLLPRLRGVLSTDKFVG-----YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXX 134
L++ +H + ++ +L G Y + DLH + S Q + + +R+
Sbjct: 108 LKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQI--IHSSQPLTLEHVRYFL 165
Query: 135 XXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAAN 194
H+ +++RDLKP N+++ EN + + DF ++ L SP
Sbjct: 166 YQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC-----TSP------- 213
Query: 195 TRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPE 254
+ + F+++ +V T Y APE
Sbjct: 214 -----AEHQYFMTE-----------------------------------YVATRWYRAPE 233
Query: 255 IIEGKGHDF--AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTP 309
++ H++ A+D WS+G + EML F G + I+ ++G P+P
Sbjct: 234 LMLSL-HEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMM----VLGTPSP 285
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/365 (19%), Positives = 121/365 (33%), Gaps = 125/365 (34%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G+V D + A+K I + ++ QR L
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKI------------------SPFEHQTYCQRTL 69
Query: 81 RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R ++ L R ++ + + Y + DL+ L K Q S+D I
Sbjct: 70 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 126
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
+ H+ +++RDLKP N+++ + + DF L+ P
Sbjct: 127 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD--------- 177
Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEY 250
FL+++ V T Y
Sbjct: 178 ---------HDHTGFLTEY-----------------------------------VATRWY 193
Query: 251 VAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT- 308
APEI + KG+ ++D WS+G +L EML F G + IL ++G P+
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPSQ 249
Query: 309 ------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIKG 333
P +N L+ ++L +P KRI VE+
Sbjct: 250 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 309
Query: 334 HEFFK 338
H + +
Sbjct: 310 HPYLE 314
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 70/176 (39%), Gaps = 46/176 (26%)
Query: 244 FVGTEEYVAPEII-EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V Y APE++ + KG VD WS G V+ EM FRGS TFY L + +
Sbjct: 193 YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS----TFYNQLNKIVE 248
Query: 303 LVGEP---------TP-----LRN-----------------------LIRRLLEKDPTKR 325
+VG P +P LRN LI ++LE +P +R
Sbjct: 249 VVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRR 308
Query: 326 IGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESDGRGRDGTKEIDVEKF 381
I E+ H +F+ L + + RF + + +D +VE+F
Sbjct: 309 ISTEQALRHPYFES----LFDPLDLTEGLSERFHFDESVTDVYDMHKIFTAEVERF 360
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 9/111 (8%)
Query: 71 RRISFEQRVLRNVEHPLLPRLRGVL------STDKFVGYAIDYCPGRDLHSLRKQQSEQM 124
+R+ E R+L + HP + LR + + K Y + DL + Q +
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKL--YLVTELMRTDLAQVIHDQ-RIV 130
Query: 125 FSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
S I++ H G+V+RDL P NI++ +N I + DF+L+
Sbjct: 131 ISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA 181
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 70/176 (39%), Gaps = 46/176 (26%)
Query: 244 FVGTEEYVAPEII-EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V Y APE++ + KG VD WS G V+ EM FRGS TFY L + +
Sbjct: 193 YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS----TFYNQLNKIVE 248
Query: 303 LVGEP---------TP-----LRN-----------------------LIRRLLEKDPTKR 325
+VG P +P LRN LI ++LE +P +R
Sbjct: 249 VVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRR 308
Query: 326 IGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESDGRGRDGTKEIDVEKF 381
I E+ H +F+ L + + RF + + +D +VE+F
Sbjct: 309 ISTEQALRHPYFES----LFDPLDLTEGLSERFHFDESVTDVYDMHKIFTAEVERF 360
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 19/183 (10%)
Query: 1 MNDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKE 60
M D++ + ++ R +S+ G+ G V D E + V + + S
Sbjct: 10 MRDLIAELHAMQSPYTVQRFISS---GSYGAVCAGVDSE-----GIPVAIKRVFNTVSDG 61
Query: 61 LTNNDNGDKY--RRISFEQRVLRNVEHPLLPRLRGVL------STDKFVGYAIDYCPGRD 112
T N D + +R+ E R+L + HP + LR + + K Y + D
Sbjct: 62 RTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKL--YLVTELMRTD 119
Query: 113 LHSLRKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDF 172
L + Q + S I++ H G+V+RDL P NI++ +N I + DF
Sbjct: 120 LAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDF 178
Query: 173 DLS 175
+L+
Sbjct: 179 NLA 181
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 72/365 (19%), Positives = 121/365 (33%), Gaps = 125/365 (34%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G+V D + A+K I + ++ QR L
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKI------------------SPFEHQTYCQRTL 69
Query: 81 RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R ++ L R ++ + + Y + DL+ L K Q S+D I
Sbjct: 70 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 126
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
+ H+ +++RDLKP N+++ + + DF L+ P
Sbjct: 127 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD--------- 177
Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEY 250
FL+++ V T Y
Sbjct: 178 ---------HDHTGFLTEY-----------------------------------VATRWY 193
Query: 251 VAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT- 308
APEI + KG+ ++D WS+G +L EML F G + IL ++G P+
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPSQ 249
Query: 309 ------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIKG 333
P +N L+ ++L +P KRI VE+
Sbjct: 250 EDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 309
Query: 334 HEFFK 338
H + +
Sbjct: 310 HPYLE 314
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 72/365 (19%), Positives = 121/365 (33%), Gaps = 125/365 (34%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G+V D + A+K I + ++ QR L
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKI------------------SPFEHQTYCQRTL 73
Query: 81 RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R ++ L R ++ + + Y + DL+ L K Q S+D I
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 130
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
+ H+ +++RDLKP N+++ + + DF L+ P
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD--------- 181
Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEY 250
FL+++ V T Y
Sbjct: 182 ---------HDHTGFLTEY-----------------------------------VATRWY 197
Query: 251 VAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT- 308
APEI + KG+ ++D WS+G +L EML F G + IL ++G P+
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPSQ 253
Query: 309 ------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIKG 333
P +N L+ ++L +P KRI VE+
Sbjct: 254 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313
Query: 334 HEFFK 338
H + +
Sbjct: 314 HPYLE 318
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 93/263 (35%), Gaps = 65/263 (24%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E ++ +HP + RL GV++ K V +Y L S ++ Q F+ +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGMLR 154
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
+MG V+RDL NI+I N + DF L L P+A A T
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLE-DDPEA------AYTT 207
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
R G + P+ + +PE
Sbjct: 208 RGG------------------KIPIR----------------------------WTSPEA 221
Query: 256 IEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETF------YRILCRPPDLVGEPT 308
I + A D WS G+VL E M YG P+ S ++ YR+ PP + P
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPPM-DCPA 277
Query: 309 PLRNLIRRLLEKDPTKRIGVEEI 331
L L+ +KD R E+I
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQI 300
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 75/201 (37%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
HN G+++RD+K ENI+I N G + L+DF
Sbjct: 127 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 155
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
SG L+D V+ F GT Y PE I + H
Sbjct: 156 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 188
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSR---KETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
+ WSLG++L++M+ G PF + F+R + ++LIR L
Sbjct: 189 RSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS--------SECQHLIRWCLA 240
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
P+ R EEI+ H + + V
Sbjct: 241 LRPSDRPTFEEIQNHPWMQDV 261
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 52/128 (40%), Gaps = 23/128 (17%)
Query: 246 GTEEYVAPEII--EGKGHDFAVDWWSLGVVLHEMLYGATPFRGS-SRKETFYRILCR--- 299
GT E++ PE E + VD WSLG+ L+ M Y PF S E F I +
Sbjct: 212 GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIE 271
Query: 300 -PPDLVGEPTPLRN----------------LIRRLLEKDPTKRIGVEEIKGHEFFKGVNW 342
P D PL N ++ L K+P +RI E+ HE+ N
Sbjct: 272 YPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNI 331
Query: 343 ELLLKISR 350
E L + S+
Sbjct: 332 EDLREFSK 339
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 77/187 (41%), Gaps = 23/187 (12%)
Query: 19 RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNG-----DKYRRI 73
RI+ L +G + L + + ++ +ALK + L+EKK ++ T ++N KY
Sbjct: 34 RIIRTLNQGKFNKIILCE--KDNKFYALKKYEKSLLEKK-RDFTKSNNDKISIKSKYDDF 90
Query: 74 SFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDD----- 128
E +++ ++++ G+++ V +Y + E F D
Sbjct: 91 KNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKF----DEYFFVLDKNYTC 146
Query: 129 -----TIRFXXXXXXXXXXXXHN-MGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKT 182
I+ HN I +RD+KP NI++ +NG + L DF S + K
Sbjct: 147 FIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKK 206
Query: 183 PQASPKT 189
+ S T
Sbjct: 207 IKGSRGT 213
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++D+ L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLA 172
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 237
Query: 303 LVGEP 307
LVG P
Sbjct: 238 LVGTP 242
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 23 LSPVGSGAYGSVCAAFDTKTGHRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 71
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K +DD ++F
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK---LTDDHVQFLIY 128
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++DF L+
Sbjct: 129 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 178 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 233
Query: 303 LVGEP 307
LVG P
Sbjct: 234 LVGTP 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 74/201 (36%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
HN G+++RD+K ENI+I N G + L+DF
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 188
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
SG L+D V+ F GT Y PE I + H
Sbjct: 189 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 221
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSR---KETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
+ WSLG++L++M+ G PF + F+R ++LIR L
Sbjct: 222 RSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS--------XECQHLIRWCLA 273
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
P+ R EEI+ H + + V
Sbjct: 274 LRPSDRPTFEEIQNHPWMQDV 294
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 72/365 (19%), Positives = 121/365 (33%), Gaps = 125/365 (34%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G+V D + A+K I + ++ QR L
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKI------------------SPFEHQTYCQRTL 69
Query: 81 RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R ++ L R ++ + + Y + DL+ L K Q S+D I
Sbjct: 70 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 126
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
+ H+ +++RDLKP N+++ + + DF L+ P
Sbjct: 127 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPD--------- 177
Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEY 250
FL+++ V T Y
Sbjct: 178 ---------HDHTGFLTEY-----------------------------------VATRWY 193
Query: 251 VAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT- 308
APEI + KG+ ++D WS+G +L EML F G + IL ++G P+
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPSQ 249
Query: 309 ------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIKG 333
P +N L+ ++L +P KRI VE+
Sbjct: 250 EDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 309
Query: 334 HEFFK 338
H + +
Sbjct: 310 HPYLE 314
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 25/172 (14%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
+G G+ GVV+ K +S E A+K + +D K N E +++R
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRK 69
Query: 83 VEHPLLPRLRGVLST------DKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXX 135
++H + RLR + + ++ +DY P R +++Q ++
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
H+ GI +RD+KP+N+++ + ++ L DF + +L P S
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 49/129 (37%), Gaps = 39/129 (30%)
Query: 244 FVGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
++ + Y APE+I G + ++D WS G VL E+L G F G S + I+
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII----K 237
Query: 303 LVGEPT----------------------PLRNLIR------------RLLEKDPTKRIGV 328
++G PT P + R RLLE PT R+
Sbjct: 238 VLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTP 297
Query: 329 EEIKGHEFF 337
E H FF
Sbjct: 298 LEACAHSFF 306
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 74/201 (36%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
HN G+++RD+K ENI+I N G + L+DF
Sbjct: 160 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 188
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
SG L+D V+ F GT Y PE I + H
Sbjct: 189 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 221
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSR---KETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
+ WSLG++L++M+ G PF + F+R ++LIR L
Sbjct: 222 RSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS--------XECQHLIRWCLA 273
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
P+ R EEI+ H + + V
Sbjct: 274 LRPSDRPTFEEIQNHPWMQDV 294
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 74/201 (36%), Gaps = 71/201 (35%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
HN G+++RD+K ENI+I N G + L+DF
Sbjct: 159 HNCGVLHRDIKDENILIDLNRGELKLIDF------------------------------- 187
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE-GKGHD 262
SG L+D V+ F GT Y PE I + H
Sbjct: 188 -------GSGALLKDTVYTD--------------------FDGTRVYSPPEWIRYHRYHG 220
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSSR---KETFYRILCRPPDLVGEPTPLRNLIRRLLE 319
+ WSLG++L++M+ G PF + F+R ++LIR L
Sbjct: 221 RSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVS--------XECQHLIRWCLA 272
Query: 320 KDPTKRIGVEEIKGHEFFKGV 340
P+ R EEI+ H + + V
Sbjct: 273 LRPSDRPTFEEIQNHPWMQDV 293
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 25/172 (14%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
+G G+ GVV+ K +S E A+K + +D K N E +++R
Sbjct: 31 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRK 73
Query: 83 VEHPLLPRLRGVLST------DKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXX 135
++H + RLR + + ++ +DY P R +++Q ++
Sbjct: 74 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 133
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
H+ GI +RD+KP+N+++ + ++ L DF + +L P S
Sbjct: 134 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 185
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 48/128 (37%), Gaps = 39/128 (30%)
Query: 245 VGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+ + Y APE+I G + ++D WS G VL E+L G F G S + I+ +
Sbjct: 187 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII----KV 242
Query: 304 VGEPT----------------------PLRNLIR------------RLLEKDPTKRIGVE 329
+G PT P + R RLLE PT R+
Sbjct: 243 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 302
Query: 330 EIKGHEFF 337
E H FF
Sbjct: 303 EACAHSFF 310
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 25/172 (14%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
+G G+ GVV+ K +S E A+K + +D K N E +++R
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRK 69
Query: 83 VEHPLLPRLRGVLST------DKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXX 135
++H + RLR + + ++ +DY P R +++Q ++
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
H+ GI +RD+KP+N+++ + ++ L DF + +L P S
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 48/128 (37%), Gaps = 39/128 (30%)
Query: 245 VGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+ + Y APE+I G + ++D WS G VL E+L G F G S + I+ +
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII----KV 238
Query: 304 VGEPT----------------------PLRNLIR------------RLLEKDPTKRIGVE 329
+G PT P + R RLLE PT R+
Sbjct: 239 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 298
Query: 330 EIKGHEFF 337
E H FF
Sbjct: 299 EACAHSFF 306
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 25/172 (14%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
+G G+ GVV+ K +S E A+K + +D K N E +++R
Sbjct: 46 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRK 88
Query: 83 VEHPLLPRLR------GVLSTDKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXX 135
++H + RLR G + ++ +DY P R +++Q ++
Sbjct: 89 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 148
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
H+ GI +RD+KP+N+++ + ++ L DF + +L P S
Sbjct: 149 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 200
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 48/128 (37%), Gaps = 39/128 (30%)
Query: 245 VGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+ + Y APE+I G + ++D WS G VL E+L G F G S + I+ +
Sbjct: 202 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII----KV 257
Query: 304 VGEPT----------------------PLRNLIR------------RLLEKDPTKRIGVE 329
+G PT P + R RLLE PT R+
Sbjct: 258 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 317
Query: 330 EIKGHEFF 337
E H FF
Sbjct: 318 EACAHSFF 325
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 25/172 (14%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
+G G+ GVV+ K +S E A+K + +D K N E +++R
Sbjct: 35 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRK 77
Query: 83 VEHPLLPRLR------GVLSTDKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXX 135
++H + RLR G + ++ +DY P R +++Q ++
Sbjct: 78 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 137
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
H+ GI +RD+KP+N+++ + ++ L DF + +L P S
Sbjct: 138 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 189
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 48/128 (37%), Gaps = 39/128 (30%)
Query: 245 VGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+ + Y APE+I G + ++D WS G VL E+L G F G S + I+ +
Sbjct: 191 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII----KV 246
Query: 304 VGEPT----------------------PLRNLIR------------RLLEKDPTKRIGVE 329
+G PT P + R RLLE PT R+
Sbjct: 247 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 306
Query: 330 EIKGHEFF 337
E H FF
Sbjct: 307 EACAHSFF 314
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 25/172 (14%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
+G G+ GVV+ K +S E A+K + +D K N E +++R
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRK 81
Query: 83 VEHPLLPRLRGVLST------DKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXX 135
++H + RLR + + ++ +DY P R +++Q ++
Sbjct: 82 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 141
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
H+ GI +RD+KP+N+++ + ++ L DF + +L P S
Sbjct: 142 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 193
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 48/128 (37%), Gaps = 39/128 (30%)
Query: 245 VGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+ + Y APE+I G + ++D WS G VL E+L G F G S + I+ +
Sbjct: 195 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII----KV 250
Query: 304 VGEPT----------------------PLRNLIR------------RLLEKDPTKRIGVE 329
+G PT P + R RLLE PT R+
Sbjct: 251 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 310
Query: 330 EIKGHEFF 337
E H FF
Sbjct: 311 EACAHSFF 318
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 25/172 (14%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
+G G+ GVV+ K +S E A+K + +D K N E +++R
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRK 69
Query: 83 VEHPLLPRLRGVLST------DKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXX 135
++H + RLR + + ++ +DY P R +++Q ++
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
H+ GI +RD+KP+N+++ + ++ L DF + +L P S
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 48/128 (37%), Gaps = 39/128 (30%)
Query: 245 VGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+ + Y APE+I G + ++D WS G VL E+L G F G S + I+ +
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII----KV 238
Query: 304 VGEPT----------------------PLRNLIR------------RLLEKDPTKRIGVE 329
+G PT P + R RLLE PT R+
Sbjct: 239 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 298
Query: 330 EIKGHEFF 337
E H FF
Sbjct: 299 EACAHSFF 306
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 25/172 (14%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
+G G+ GVV+ K +S E A+K + +D K N E +++R
Sbjct: 28 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRK 70
Query: 83 VEHPLLPRLRGVLST------DKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXX 135
++H + RLR + + ++ +DY P R +++Q ++
Sbjct: 71 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 130
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
H+ GI +RD+KP+N+++ + ++ L DF + +L P S
Sbjct: 131 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 182
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 48/128 (37%), Gaps = 39/128 (30%)
Query: 245 VGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+ + Y APE+I G + ++D WS G VL E+L G F G S + I+ +
Sbjct: 184 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII----KV 239
Query: 304 VGEPT----------------------PLRNLIR------------RLLEKDPTKRIGVE 329
+G PT P + R RLLE PT R+
Sbjct: 240 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 299
Query: 330 EIKGHEFF 337
E H FF
Sbjct: 300 EACAHSFF 307
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 25/171 (14%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G G+ GVV+ K +S E A+K + +D K N E +++R +
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRKL 75
Query: 84 EHPLLPRLR------GVLSTDKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXXX 136
+H + RLR G + ++ +DY P R +++Q ++
Sbjct: 76 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 135
Query: 137 XXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
H+ GI +RD+KP+N+++ + ++ L DF + +L P S
Sbjct: 136 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 186
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 69/191 (36%), Gaps = 40/191 (20%)
Query: 244 FVGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
++ + Y APE+I G + ++D WS G VL E+L G F G S + I+
Sbjct: 187 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII----K 242
Query: 303 LVGEPT----------------------PLRNLIR------------RLLEKDPTKRIGV 328
++G PT P + R RLLE PT R+
Sbjct: 243 VLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTP 302
Query: 329 EEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESDGRGRDGTKEIDVEKFVQGIFAG 388
E H FF + + +K+ + PA F E T I +Q +
Sbjct: 303 LEACAHSFFDELR-DPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAAST 361
Query: 389 GGDAEQKNEVN 399
+A ++ N
Sbjct: 362 PTNATAASDAN 372
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 25/171 (14%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G G+ GVV+ K +S E A+K + +D K N E +++R +
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRKL 82
Query: 84 EHPLLPRLR------GVLSTDKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXXX 136
+H + RLR G + ++ +DY P R +++Q ++
Sbjct: 83 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 142
Query: 137 XXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
H+ GI +RD+KP+N+++ + ++ L DF + +L P S
Sbjct: 143 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 193
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 48/128 (37%), Gaps = 39/128 (30%)
Query: 245 VGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+ + Y APE+I G + ++D WS G VL E+L G F G S + I+ +
Sbjct: 195 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII----KV 250
Query: 304 VGEPT----------------------PLRNLIR------------RLLEKDPTKRIGVE 329
+G PT P + R RLLE PT R+
Sbjct: 251 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 310
Query: 330 EIKGHEFF 337
E H FF
Sbjct: 311 EACAHSFF 318
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 25/171 (14%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G G+ GVV+ K +S E A+K + +D K N E +++R +
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRKL 104
Query: 84 EHPLLPRLR------GVLSTDKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXXX 136
+H + RLR G + ++ +DY P R +++Q ++
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 137 XXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
H+ GI +RD+KP+N+++ + ++ L DF + +L P S
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 215
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 68/190 (35%), Gaps = 40/190 (21%)
Query: 245 VGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+ + Y APE+I G + ++D WS G VL E+L G F G S + I+ +
Sbjct: 217 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII----KV 272
Query: 304 VGEPT----------------------PLRNLIR------------RLLEKDPTKRIGVE 329
+G PT P + R RLLE PT R+
Sbjct: 273 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 332
Query: 330 EIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESDGRGRDGTKEIDVEKFVQGIFAGG 389
E H FF + + +K+ + PA F E T I +Q +
Sbjct: 333 EACAHSFFDELR-DPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTP 391
Query: 390 GDAEQKNEVN 399
+A ++ N
Sbjct: 392 TNATAASDAN 401
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 25/171 (14%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G G+ GVV+ K +S E A+K + +D K N E +++R +
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRKL 98
Query: 84 EHPLLPRLR------GVLSTDKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXXX 136
+H + RLR G + ++ +DY P R +++Q ++
Sbjct: 99 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 158
Query: 137 XXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
H+ GI +RD+KP+N+++ + ++ L DF + +L P S
Sbjct: 159 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 209
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 69/191 (36%), Gaps = 40/191 (20%)
Query: 244 FVGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
++ + Y APE+I G + ++D WS G VL E+L G F G S + I+
Sbjct: 210 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII----K 265
Query: 303 LVGEPT----------------------PLRNLIR------------RLLEKDPTKRIGV 328
++G PT P + R RLLE PT R+
Sbjct: 266 VLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTP 325
Query: 329 EEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESDGRGRDGTKEIDVEKFVQGIFAG 388
E H FF + + +K+ + PA F E T I +Q +
Sbjct: 326 LEACAHSFFDELR-DPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAAST 384
Query: 389 GGDAEQKNEVN 399
+A ++ N
Sbjct: 385 PTNATAASDAN 395
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 25/172 (14%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
+G G+ GVV+ K +S E A+K + +D K N E +++R
Sbjct: 40 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRK 82
Query: 83 VEHPLLPRLRGVLST------DKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXX 135
++H + RLR + + ++ +DY P R +++Q ++
Sbjct: 83 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 142
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
H+ GI +RD+KP+N+++ + ++ L DF + +L P S
Sbjct: 143 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 194
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 49/129 (37%), Gaps = 39/129 (30%)
Query: 244 FVGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
++ + Y APE+I G + ++D WS G VL E+L G F G S + I+
Sbjct: 195 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII----K 250
Query: 303 LVGEPT----------------------PLRNLIR------------RLLEKDPTKRIGV 328
++G PT P + R RLLE PT R+
Sbjct: 251 VLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTP 310
Query: 329 EEIKGHEFF 337
E H FF
Sbjct: 311 LEACAHSFF 319
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 25/171 (14%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G G+ GVV+ K +S E A+K + +D K N E +++R +
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRKL 106
Query: 84 EHPLLPRLR------GVLSTDKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXXX 136
+H + RLR G + ++ +DY P R +++Q ++
Sbjct: 107 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 166
Query: 137 XXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
H+ GI +RD+KP+N+++ + ++ L DF + +L P S
Sbjct: 167 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 217
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 69/191 (36%), Gaps = 40/191 (20%)
Query: 244 FVGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
++ + Y APE+I G + ++D WS G VL E+L G F G S + I+
Sbjct: 218 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII----K 273
Query: 303 LVGEPT----------------------PLRNLIR------------RLLEKDPTKRIGV 328
++G PT P + R RLLE PT R+
Sbjct: 274 VLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTP 333
Query: 329 EEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESDGRGRDGTKEIDVEKFVQGIFAG 388
E H FF + + +K+ + PA F E T I +Q +
Sbjct: 334 LEACAHSFFDELR-DPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAAST 392
Query: 389 GGDAEQKNEVN 399
+A ++ N
Sbjct: 393 PTNATAASDAN 403
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 80/196 (40%), Gaps = 41/196 (20%)
Query: 2 NDVVNDRPIRSLDFSC----------LRIVSALGRGAKGVVFLVKDVESSESFALKVIWR 51
DV RP D++ ++V LGRG VF ++ ++E +K++
Sbjct: 13 TDVNTHRPREYWDYASHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL-- 70
Query: 52 DLIEKKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRG---VLSTDKFVGYAIDYC 108
K + N +I E ++L N LRG +++ V +
Sbjct: 71 -------KPVKKN-------KIKREIKILEN--------LRGGPNIITLADIVKDPVSRT 108
Query: 109 PGRDLHSLRKQQSEQMF---SDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QEN 164
P + +Q++ +D IRF H+MGI++RD+KP N+MI E+
Sbjct: 109 PALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH 168
Query: 165 GHIMLVDFDLSTKLSP 180
+ L+D+ L+ P
Sbjct: 169 RKLRLIDWGLAEFYHP 184
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 245 VGTEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPF 284
V + + PE+ ++ + +D+++D WSLG +L M++ PF
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 25/171 (14%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G G+ GVV+ K +S E A+K + +D K N E +++R +
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRKL 104
Query: 84 EHPLLPRLR------GVLSTDKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXXX 136
+H + RLR G + ++ +DY P R +++Q ++
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 137 XXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
H+ GI +RD+KP+N+++ + ++ L DF + +L P S
Sbjct: 165 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 215
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 69/191 (36%), Gaps = 40/191 (20%)
Query: 244 FVGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
++ + Y APE+I G + ++D WS G VL E+L G F G S + I+
Sbjct: 216 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII----K 271
Query: 303 LVGEPT----------------------PLRNLIR------------RLLEKDPTKRIGV 328
++G PT P + R RLLE PT R+
Sbjct: 272 VLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTP 331
Query: 329 EEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESDGRGRDGTKEIDVEKFVQGIFAG 388
E H FF + + +K+ + PA F E T I +Q +
Sbjct: 332 LEACAHSFFDELR-DPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAAST 390
Query: 389 GGDAEQKNEVN 399
+A ++ N
Sbjct: 391 PTNATAASDAN 401
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 25/171 (14%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G G+ GVV+ K +S E A+K + +D K N E +++R +
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRKL 108
Query: 84 EHPLLPRLR------GVLSTDKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXXX 136
+H + RLR G + ++ +DY P R +++Q ++
Sbjct: 109 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 168
Query: 137 XXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
H+ GI +RD+KP+N+++ + ++ L DF + +L P S
Sbjct: 169 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 219
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 69/191 (36%), Gaps = 40/191 (20%)
Query: 244 FVGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
++ + Y APE+I G + ++D WS G VL E+L G F G S + I+
Sbjct: 220 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII----K 275
Query: 303 LVGEPT----------------------PLRNLIR------------RLLEKDPTKRIGV 328
++G PT P + R RLLE PT R+
Sbjct: 276 VLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTP 335
Query: 329 EEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESDGRGRDGTKEIDVEKFVQGIFAG 388
E H FF + + +K+ + PA F E T I +Q +
Sbjct: 336 LEACAHSFFDELR-DPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAAST 394
Query: 389 GGDAEQKNEVN 399
+A ++ N
Sbjct: 395 PTNATAASDAN 405
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 73/171 (42%), Gaps = 25/171 (14%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G G+ GVV+ K +S E A+K + +D K N E +++R +
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRKL 149
Query: 84 EHPLLPRLR------GVLSTDKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXXX 136
+H + RLR G + ++ +DY P R +++Q ++
Sbjct: 150 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 209
Query: 137 XXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
H+ GI +RD+KP+N+++ + ++ L DF + +L P S
Sbjct: 210 LFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 260
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 69/191 (36%), Gaps = 40/191 (20%)
Query: 244 FVGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
++ + Y APE+I G + ++D WS G VL E+L G F G S + I+
Sbjct: 261 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII----K 316
Query: 303 LVGEPT----------------------PLRNLIR------------RLLEKDPTKRIGV 328
++G PT P + R RLLE PT R+
Sbjct: 317 VLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTP 376
Query: 329 EEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESDGRGRDGTKEIDVEKFVQGIFAG 388
E H FF + + +K+ + PA F E T I +Q +
Sbjct: 377 LEACAHSFFDELR-DPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAAST 435
Query: 389 GGDAEQKNEVN 399
+A ++ N
Sbjct: 436 PTNATAASDAN 446
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 72/172 (41%), Gaps = 25/172 (14%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
+G G+ GVV+ K +S E A+K + +D K N E +++R
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFKNR-----------ELQIMRK 69
Query: 83 VEHPLLPRLRGVLSTDK------FVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXX 135
++H + RLR + ++ +DY P R +++Q ++
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
H+ GI +RD+KP+N+++ + ++ L DF + +L P S
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 48/128 (37%), Gaps = 39/128 (30%)
Query: 245 VGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+ + Y APE+I G + ++D WS G VL E+L G F G S + I+ +
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII----KV 238
Query: 304 VGEPT----------------------PLRNLIR------------RLLEKDPTKRIGVE 329
+G PT P + R RLLE PT R+
Sbjct: 239 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 298
Query: 330 EIKGHEFF 337
E H FF
Sbjct: 299 EACAHSFF 306
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKET--------FYR 295
FVGT Y++PE + ++ D WSLG +L+E+ PF S+KE F R
Sbjct: 176 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR 235
Query: 296 ILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
I R D + E +I R+L R VEEI
Sbjct: 236 IPYRYSDELNE------IITRMLNLKDYHRPSVEEI 265
Score = 34.7 bits (78), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 67/157 (42%), Gaps = 21/157 (13%)
Query: 76 EQRVLRNVEHPLLPRL--RGVLSTDKFVGYAIDYCPGRDLHSL--RKQQSEQMFSDDTIR 131
E +LR ++HP + R R + T+ + ++YC G DL S+ + + Q ++ +
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 132 FXXXXXXXXXXXXHNMG-----IVYRDLKPENIMIQENGHIMLVDFDLSTKLSPK----- 181
H +++RDLKP N+ + ++ L DF L+ L+
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAK 174
Query: 182 ----TP-QASPKTV--LAANTRSGIKKRRSFLSKFCS 211
TP SP+ + ++ N +S I L + C+
Sbjct: 175 EFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKET--------FYR 295
FVGT Y++PE + ++ D WSLG +L+E+ PF S+KE F R
Sbjct: 176 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR 235
Query: 296 ILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
I R D + E +I R+L R VEEI
Sbjct: 236 IPYRYSDELNE------IITRMLNLKDYHRPSVEEI 265
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 67/157 (42%), Gaps = 21/157 (13%)
Query: 76 EQRVLRNVEHPLLPRL--RGVLSTDKFVGYAIDYCPGRDLHSL--RKQQSEQMFSDDTIR 131
E +LR ++HP + R R + T+ + ++YC G DL S+ + + Q ++ +
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 132 FXXXXXXXXXXXXHNMG-----IVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA- 185
H +++RDLKP N+ + ++ L DF L+ L+ T A
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK 174
Query: 186 ---------SPKTV--LAANTRSGIKKRRSFLSKFCS 211
SP+ + ++ N +S I L + C+
Sbjct: 175 TFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 14/96 (14%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKET--------FYR 295
FVGT Y++PE + ++ D WSLG +L+E+ PF S+KE F R
Sbjct: 176 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR 235
Query: 296 ILCRPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
I R D + E +I R+L R VEEI
Sbjct: 236 IPYRYSDELNE------IITRMLNLKDYHRPSVEEI 265
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 67/157 (42%), Gaps = 21/157 (13%)
Query: 76 EQRVLRNVEHPLLPRL--RGVLSTDKFVGYAIDYCPGRDLHSL--RKQQSEQMFSDDTIR 131
E +LR ++HP + R R + T+ + ++YC G DL S+ + + Q ++ +
Sbjct: 55 EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL 114
Query: 132 FXXXXXXXXXXXXHNMG-----IVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA- 185
H +++RDLKP N+ + ++ L DF L+ L+ T A
Sbjct: 115 RVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK 174
Query: 186 ---------SPKTV--LAANTRSGIKKRRSFLSKFCS 211
SP+ + ++ N +S I L + C+
Sbjct: 175 AFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 93/263 (35%), Gaps = 65/263 (24%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E ++ +HP + RL GV++ K V + L S ++ Q F+ +
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-FTVIQLVGMLR 125
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
+MG V+RDL NI+I N + DF LS L P+A A T
Sbjct: 126 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEA------AYTT 178
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
R G + P+ + +PE
Sbjct: 179 RGG------------------KIPIR----------------------------WTSPEA 192
Query: 256 IEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETF------YRILCRPPDLVGEPT 308
I + A D WS G+VL E M YG P+ S ++ YR+ PP + P
Sbjct: 193 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPPM-DCPA 248
Query: 309 PLRNLIRRLLEKDPTKRIGVEEI 331
L L+ +KD R E+I
Sbjct: 249 ALYQLMLDCWQKDRNNRPKFEQI 271
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+V T Y APE+I G G+ VD WS+G ++ E++ G F+G+ + + +++ +
Sbjct: 185 YVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVI----EQ 240
Query: 304 VGEPT-----PLRNLIRRLLEKDP 322
+G P+ L+ +R +E P
Sbjct: 241 LGTPSAEFMAALQPTVRNYVENRP 264
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +L+ V
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVK--------KLSRPFQNQTHAKRAYR---ELVLLKCV 80
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q M D + + +
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIK 140
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 79/198 (39%), Gaps = 48/198 (24%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAA-NTRSGIKKRR 203
H+ G+++RDLKP NI + + + DF L T + + + T + A T G
Sbjct: 181 HSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQ---- 236
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDF 263
VGT+ Y++PE I G +
Sbjct: 237 -----------------------------------------VGTKLYMSPEQIHGNNYSH 255
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPTPLRN-LIRRLLEKDP 322
VD +SLG++L E+LY + R T R L + P L + P + +++ +L P
Sbjct: 256 KVDIFSLGLILFELLYSFSTQMERVRIITDVRNL-KFPLLFTQKYPQEHMMVQDMLSPSP 314
Query: 323 TKRIGVEEIKGHEFFKGV 340
T+R +I + F+ +
Sbjct: 315 TERPEATDIIENAIFENL 332
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 72/172 (41%), Gaps = 25/172 (14%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
+G G+ GVV+ K +S E A+K + + K N E +++R
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVL------QGKAFKNR-----------ELQIMRK 69
Query: 83 VEHPLLPRLRGVLST------DKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXX 135
++H + RLR + + ++ +DY P R +++Q ++
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
H+ GI +RD+KP+N+++ + ++ L DF + +L P S
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 48/128 (37%), Gaps = 39/128 (30%)
Query: 245 VGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+ + Y APE+I G + ++D WS G VL E+L G F G S + I+ +
Sbjct: 183 ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII----KV 238
Query: 304 VGEPT----------------------PLRNLIR------------RLLEKDPTKRIGVE 329
+G PT P + R RLLE PT R+
Sbjct: 239 LGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 298
Query: 330 EIKGHEFF 337
E H FF
Sbjct: 299 EACAHSFF 306
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+V T Y APE+I G G+ VD WS+G ++ E++ G+ F+G+ + + +++ +
Sbjct: 183 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVI----EQ 238
Query: 304 VGEPT-----PLRNLIRRLLEKDPTKR-IGVEEI 331
+G P+ L+ +R +E P I EE+
Sbjct: 239 LGTPSAEFMAALQPTVRNYVENRPAYPGIAFEEL 272
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 12/157 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +L+ V
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVK--------KLSRPFQNQTHAKRAYR---ELVLLKCV 78
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q M D + + +
Sbjct: 79 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIK 138
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
H+ GI++RDLKP NI+++ + + ++DF L+ S
Sbjct: 139 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAS 175
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 93/263 (35%), Gaps = 65/263 (24%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E ++ +HP + RL GV++ K V + L S ++ Q F+ +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-FTVIQLVGMLR 154
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
+MG V+RDL NI+I N + DF LS L P+A A T
Sbjct: 155 GIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEA------AYTT 207
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
R G + P+ + +PE
Sbjct: 208 RGG------------------KIPIR----------------------------WTSPEA 221
Query: 256 IEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETF------YRILCRPPDLVGEPT 308
I + A D WS G+VL E M YG P+ S ++ YR+ PP + P
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPPM-DCPA 277
Query: 309 PLRNLIRRLLEKDPTKRIGVEEI 331
L L+ +KD R E+I
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQI 300
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI---LCRPPDLVGE 306
Y +PE++ G +D A+D WSLG +L EM G F G++ + +I L PP + +
Sbjct: 224 YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD 283
Query: 307 PTPLRNLIRRLLEKDP 322
P R+ EK P
Sbjct: 284 QAP---KARKFFEKLP 296
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 35/180 (19%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIW-------RDLIEKKSKELTN-NDNGDKYR 71
I S +G+G+ G V D E A+K+I + IE + EL N +D KY
Sbjct: 58 IDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYY 117
Query: 72 RISFEQRVL-RN----VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFS 126
+ ++ + RN V L L +L F G +++ L ++ ++QM +
Sbjct: 118 IVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLN---------LTRKFAQQMCT 168
Query: 127 DDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI--QENGHIMLVDFDLSTKLSPKTPQ 184
+ F + I++ DLKPENI++ + I +VDF S +L + Q
Sbjct: 169 --ALLFLATP---------ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ 217
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 129/359 (35%), Gaps = 112/359 (31%)
Query: 9 PIRSLDFSC--LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDN 66
P + DF+ L+ + +GRGA G V + S + A+K I + EK+ K+L + +
Sbjct: 13 PEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLD 72
Query: 67 GDKYRRISFEQRVLRNVEHPLLPRLRGVL---------------STDKFVGYAIDYCPGR 111
V+R+ + P + + G L S DKF Y
Sbjct: 73 -----------VVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSV---- 117
Query: 112 DLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVD 171
L E++ T+ N+ I++RD+KP NI++ +G+I
Sbjct: 118 ----LDDVIPEEILGKITL----ATVKALNHLKENLKIIHRDIKPSNILLDRSGNI---- 165
Query: 172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGIS--LEDPVHXXXXXXXX 229
K C GIS L D +
Sbjct: 166 ------------------------------------KLCDFGISGQLVDSIAKTRD---- 185
Query: 230 XXXXXXXXXXXXXXFVGTEEYVAPEIIEG----KGHDFAVDWWSLGVVLHEMLYGATPF- 284
G Y+APE I+ +G+D D WSLG+ L+E+ G P+
Sbjct: 186 ---------------AGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYP 230
Query: 285 RGSSRKETFYRIL-CRPPDLVG----EPTP-LRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
+ +S + +++ PP L E +P N + L KD +KR +E+ H F
Sbjct: 231 KWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 108/318 (33%), Gaps = 64/318 (20%)
Query: 11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKY 70
+ +D SC++I +G G G V S LK+ + I K L + +
Sbjct: 28 KEIDISCVKIEQVIGAGEFGEVC---------SGHLKLPGKREIFVAIKTLKSGYTEKQR 78
Query: 71 RRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R E ++ +HP + L GV++ V ++ L S +Q Q F+ +
Sbjct: 79 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-FTVIQL 137
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
+M V+RDL NI++ N + DF LS L T + +
Sbjct: 138 VGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA 197
Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEY 250
L P+ +
Sbjct: 198 LGGKI-----------------------PI----------------------------RW 206
Query: 251 VAPEIIEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETFYRIL--CRPPDLVGEP 307
APE I+ + A D WS G+V+ E M YG P+ + ++ I R P + P
Sbjct: 207 TAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCP 266
Query: 308 TPLRNLIRRLLEKDPTKR 325
+ L L+ +KD R
Sbjct: 267 SALHQLMLDCWQKDRNHR 284
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI---LCRPPDLVGE 306
Y +PE++ G +D A+D WSLG +L EM G F G++ + +I L PP + +
Sbjct: 205 YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD 264
Query: 307 PTPLRNLIRRLLEKDP 322
P R+ EK P
Sbjct: 265 QAP---KARKFFEKLP 277
Score = 28.9 bits (63), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 35/180 (19%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIW-------RDLIEKKSKELTN-NDNGDKYR 71
I S +G+G+ G V D E A+K+I + IE + EL N +D KY
Sbjct: 39 IDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYY 98
Query: 72 RISFEQRVL-RN----VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFS 126
+ ++ + RN V L L +L F G +++ L ++ ++QM +
Sbjct: 99 IVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLN---------LTRKFAQQMCT 149
Query: 127 DDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI--QENGHIMLVDFDLSTKLSPKTPQ 184
+ F + I++ DLKPENI++ + I +VDF S +L + Q
Sbjct: 150 --ALLFLATP---------ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQ 198
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI---LCRPPDLVGE 306
Y +PE++ G +D A+D WSLG +L EM G F G++ + +I L PP + +
Sbjct: 224 YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD 283
Query: 307 PTPLRNLIRRLLEKDP 322
P R+ EK P
Sbjct: 284 QAP---KARKFFEKLP 296
Score = 28.1 bits (61), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 35/180 (19%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIW-------RDLIEKKSKELTN-NDNGDKYR 71
I S +G+G+ G V D E A+K+I + IE + EL N +D KY
Sbjct: 58 IDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYY 117
Query: 72 RISFEQRVL-RN----VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFS 126
+ ++ + RN V L L +L F G +++ L ++ ++QM +
Sbjct: 118 IVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLN---------LTRKFAQQMCT 168
Query: 127 DDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI--QENGHIMLVDFDLSTKLSPKTPQ 184
+ F + I++ DLKPENI++ + I +VDF S +L + Q
Sbjct: 169 --ALLFLATP---------ELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQ 217
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 93/263 (35%), Gaps = 65/263 (24%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E ++ +HP + RL GV++ K V + L S ++ Q F+ +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-FTVIQLVGMLR 154
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
+MG V+RDL NI+I N + DF LS L P+A A T
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEA------AYTT 207
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
R G + P+ + +PE
Sbjct: 208 RGG------------------KIPIR----------------------------WTSPEA 221
Query: 256 IEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETF------YRILCRPPDLVGEPT 308
I + A D WS G+VL E M YG P+ S ++ YR+ PP + P
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL---PPPM-DCPA 277
Query: 309 PLRNLIRRLLEKDPTKRIGVEEI 331
L L+ +KD R E+I
Sbjct: 278 ALYQLMLDCWQKDRNNRPKFEQI 300
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++ F L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLA 172
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 237
Query: 303 LVGEP 307
LVG P
Sbjct: 238 LVGTP 242
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 23/163 (14%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWR---DLIEKKSKELTNNDNGDKYRRISFE 76
I +GRG+ G V+L D + ++ A+K + R DLI+ K RI E
Sbjct: 30 IKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCK--------------RILRE 75
Query: 77 QRVLRNVEHPLLPRLRGVLSTDKFVG----YAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
+L ++ + RL ++ D + Y + DL L K + +++ I+
Sbjct: 76 ITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFK--TPIFLTEEHIKT 133
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H GI++RDLKP N ++ ++ + + DF L+
Sbjct: 134 ILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLA 176
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+V T Y APE+I G G+ VD WS+G ++ EM+ F G + + +++ +
Sbjct: 190 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVI----EQ 245
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHE 361
+G P P +++L PT R VE + G ++E L P++ PA EH
Sbjct: 246 LGTPCP--EFMKKL---QPTVRTYVE---NRPKYAGYSFEKLF-----PDVLFPADSEH- 291
Query: 362 NNESDGRGR---------DGTKEIDVEKFVQ 383
N + R D +K I V++ +Q
Sbjct: 292 NKLKASQARDLLSKMLVIDASKRISVDEALQ 322
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 37 IGSGAQGIVCAAYDAILERNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 85
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 86 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 145
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 146 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 178
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 122/366 (33%), Gaps = 127/366 (34%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G+V D + A+K I + ++ QR L
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKI------------------SPFEHQTYCQRTL 69
Query: 81 RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R ++ L R ++ + + Y + DL+ L K Q S+D I
Sbjct: 70 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 126
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
+ H+ +++RDLKP N+++
Sbjct: 127 CYFLYQILRGLKYIHSANVLHRDLKPSNLLL----------------------------- 157
Query: 191 LAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
NT +K C G++ + DP H +V T
Sbjct: 158 ---NTTCDLK--------ICDFGLARVADPDHDHTGFLTE--------------YVATRW 192
Query: 250 YVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
Y APEI + KG+ ++D WS+G +L EML F G + IL ++G P+
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPS 248
Query: 309 -------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIK 332
P +N L+ ++L +P KRI VE+
Sbjct: 249 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 333 GHEFFK 338
H + +
Sbjct: 309 AHPYLE 314
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 122/366 (33%), Gaps = 127/366 (34%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G+V D + A+K I + ++ QR L
Sbjct: 30 LSYIGEGAYGMVCSAYDNVNKVRVAIKKI------------------SPFEHQTYCQRTL 71
Query: 81 RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R ++ L R ++ + + Y + DL+ L K Q S+D I
Sbjct: 72 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 128
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
+ H+ +++RDLKP N+++
Sbjct: 129 CYFLYQILRGLKYIHSANVLHRDLKPSNLLL----------------------------- 159
Query: 191 LAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
NT +K C G++ + DP H +V T
Sbjct: 160 ---NTTCDLK--------ICDFGLARVADPDHDHTGFLTE--------------YVATRW 194
Query: 250 YVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
Y APEI + KG+ ++D WS+G +L EML F G + IL ++G P+
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPS 250
Query: 309 -------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIK 332
P +N L+ ++L +P KRI VE+
Sbjct: 251 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 310
Query: 333 GHEFFK 338
H + +
Sbjct: 311 AHPYLE 316
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 122/366 (33%), Gaps = 127/366 (34%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G+V D + A+K I + ++ QR L
Sbjct: 48 LSYIGEGAYGMVCSAYDNVNKVRVAIKKI------------------SPFEHQTYCQRTL 89
Query: 81 RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R ++ L R ++ + + Y + DL+ L K Q S+D I
Sbjct: 90 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 146
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
+ H+ +++RDLKP N+++
Sbjct: 147 CYFLYQILRGLKYIHSANVLHRDLKPSNLLL----------------------------- 177
Query: 191 LAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
NT +K C G++ + DP H +V T
Sbjct: 178 ---NTTCDLK--------ICDFGLARVADPDHDHTGFLTE--------------YVATRW 212
Query: 250 YVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
Y APEI + KG+ ++D WS+G +L EML F G + IL ++G P+
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPS 268
Query: 309 -------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIK 332
P +N L+ ++L +P KRI VE+
Sbjct: 269 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 328
Query: 333 GHEFFK 338
H + +
Sbjct: 329 AHPYLE 334
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 29/151 (19%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+V T Y APE+I G G+ VD WS+G ++ EM+ F G + + +++ +
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVI----EQ 234
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHE 361
+G P P +++L PT R VE + G ++E L P++ PA EH
Sbjct: 235 LGTPCP--EFMKKL---QPTVRTYVE---NRPKYAGYSFEKLF-----PDVLFPADSEH- 280
Query: 362 NNESDGRGR---------DGTKEIDVEKFVQ 383
N + R D +K I V++ +Q
Sbjct: 281 NKLKASQARDLLSKMLVIDASKRISVDEALQ 311
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 26 IGSGAQGIVCAAYDAILERNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 74
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 75 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 134
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 135 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 122/366 (33%), Gaps = 127/366 (34%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G+V D + A+K I + ++ QR L
Sbjct: 36 LSYIGEGAYGMVCSAYDNVNKVRVAIKKI------------------SPFEHQTYCQRTL 77
Query: 81 RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R ++ L R ++ + + Y + DL+ L K Q S+D I
Sbjct: 78 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 134
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
+ H+ +++RDLKP N+++
Sbjct: 135 CYFLYQILRGLKYIHSANVLHRDLKPSNLLL----------------------------- 165
Query: 191 LAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
NT +K C G++ + DP H +V T
Sbjct: 166 ---NTTCDLK--------ICDFGLARVADPDHDHTGFLTE--------------YVATRW 200
Query: 250 YVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
Y APEI + KG+ ++D WS+G +L EML F G + IL ++G P+
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPS 256
Query: 309 -------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIK 332
P +N L+ ++L +P KRI VE+
Sbjct: 257 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 316
Query: 333 GHEFFK 338
H + +
Sbjct: 317 AHPYLE 322
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 122/366 (33%), Gaps = 127/366 (34%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G+V D + A+K I + ++ QR L
Sbjct: 28 LSYIGEGAYGMVCSAYDNVNKVRVAIKKI------------------SPFEHQTYCQRTL 69
Query: 81 RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R ++ L R ++ + + Y + DL+ L K Q S+D I
Sbjct: 70 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 126
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
+ H+ +++RDLKP N+++
Sbjct: 127 CYFLYQILRGLKYIHSANVLHRDLKPSNLLL----------------------------- 157
Query: 191 LAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
NT +K C G++ + DP H +V T
Sbjct: 158 ---NTTCDLK--------ICDFGLARVADPDHDHTGFLTE--------------YVATRW 192
Query: 250 YVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
Y APEI + KG+ ++D WS+G +L EML F G + IL ++G P+
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPS 248
Query: 309 -------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIK 332
P +N L+ ++L +P KRI VE+
Sbjct: 249 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 333 GHEFFK 338
H + +
Sbjct: 309 AHPYLE 314
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++D L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLA 172
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 237
Query: 303 LVGEP 307
LVG P
Sbjct: 238 LVGTP 242
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
++ + Y APE+I G H AVD WS+G + EM+ G FRG + + I+
Sbjct: 191 YICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIV----R 246
Query: 303 LVGEPTPLRNLIRRL 317
++G P+ R ++R+L
Sbjct: 247 VLGCPS--REVLRKL 259
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 146 NMGIVYRDLKPENIMIQE-NGHIMLVDFDLSTKLSPKTPQAS 186
++ + +RD+KP N+++ E +G + L DF + KLSP P +
Sbjct: 149 SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA 190
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 122/366 (33%), Gaps = 127/366 (34%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G+V D + A+K I + ++ QR L
Sbjct: 26 LSYIGEGAYGMVCSAYDNLNKVRVAIKKI------------------SPFEHQTYCQRTL 67
Query: 81 RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R ++ L R ++ + + Y + DL+ L K Q S+D I
Sbjct: 68 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 124
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
+ H+ +++RDLKP N+++
Sbjct: 125 CYFLYQILRGLKYIHSANVLHRDLKPSNLLL----------------------------- 155
Query: 191 LAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
NT +K C G++ + DP H +V T
Sbjct: 156 ---NTTCDLK--------ICDFGLARVADPDHDHTGFLTE--------------YVATRW 190
Query: 250 YVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
Y APEI + KG+ ++D WS+G +L EML F G + IL ++G P+
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPS 246
Query: 309 -------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIK 332
P +N L+ ++L +P KRI VE+
Sbjct: 247 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 306
Query: 333 GHEFFK 338
H + +
Sbjct: 307 AHPYLE 312
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 94/280 (33%), Gaps = 72/280 (25%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S LG G GVV V+ S ++ R LI + K N +I E +VL
Sbjct: 21 ISELGAGNGGVVTKVQHRPSG-----LIMARKLIHLEIKPAIRN-------QIIRELQVL 68
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXX 140
P + G +D + +++ G L + K+ ++++ + +
Sbjct: 69 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE-AKRIPEEILGKVSIAVLRGL 127
Query: 141 XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIK 200
I++RD+KP NI++ G I
Sbjct: 128 AYLREKHQIMHRDVKPSNILVNSRGEI--------------------------------- 154
Query: 201 KRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKG 260
K C G+S + FVGT Y+APE ++G
Sbjct: 155 -------KLCDFGVSGQ------------------LIDSMANSFVGTRSYMAPERLQGTH 189
Query: 261 HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP 300
+ D WS+G+ L E+ G P KE I RP
Sbjct: 190 YSVQSDIWSMGLSLVELAVGRYPIPPPDAKE-LEAIFGRP 228
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 122/366 (33%), Gaps = 127/366 (34%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G+V D + A+K I + ++ QR L
Sbjct: 33 LSYIGEGAYGMVCSAYDNLNKVRVAIKKI------------------SPFEHQTYCQRTL 74
Query: 81 RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R ++ L R ++ + + Y + DL+ L K Q S+D I
Sbjct: 75 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 131
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
+ H+ +++RDLKP N+++
Sbjct: 132 CYFLYQILRGLKYIHSANVLHRDLKPSNLLL----------------------------- 162
Query: 191 LAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
NT +K C G++ + DP H +V T
Sbjct: 163 ---NTTCDLK--------ICDFGLARVADPDHDHTGFLTE--------------YVATRW 197
Query: 250 YVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
Y APEI + KG+ ++D WS+G +L EML F G + IL ++G P+
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPS 253
Query: 309 -------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIK 332
P +N L+ ++L +P KRI VE+
Sbjct: 254 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 313
Query: 333 GHEFFK 338
H + +
Sbjct: 314 AHPYLE 319
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 122/366 (33%), Gaps = 127/366 (34%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G+V D + A+K I + ++ QR L
Sbjct: 34 LSYIGEGAYGMVCSAYDNLNKVRVAIKKI------------------SPFEHQTYCQRTL 75
Query: 81 RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R ++ L R ++ + + Y + DL+ L K Q S+D I
Sbjct: 76 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 132
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
+ H+ +++RDLKP N+++
Sbjct: 133 CYFLYQILRGLKYIHSANVLHRDLKPSNLLL----------------------------- 163
Query: 191 LAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
NT +K C G++ + DP H +V T
Sbjct: 164 ---NTTCDLK--------ICDFGLARVADPDHDHTGFLTE--------------YVATRW 198
Query: 250 YVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
Y APEI + KG+ ++D WS+G +L EML F G + IL ++G P+
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPS 254
Query: 309 -------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIK 332
P +N L+ ++L +P KRI VE+
Sbjct: 255 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 314
Query: 333 GHEFFK 338
H + +
Sbjct: 315 AHPYLE 320
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 122/366 (33%), Gaps = 127/366 (34%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G+V D + A+K I + ++ QR L
Sbjct: 25 LSYIGEGAYGMVCSAYDNLNKVRVAIKKI------------------SPFEHQTYCQRTL 66
Query: 81 RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R ++ L R ++ + + Y + DL+ L K Q S+D I
Sbjct: 67 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 123
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
+ H+ +++RDLKP N+++
Sbjct: 124 CYFLYQILRGLKYIHSANVLHRDLKPSNLLL----------------------------- 154
Query: 191 LAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
NT +K C G++ + DP H +V T
Sbjct: 155 ---NTTCDLK--------ICDFGLARVADPDHDHTGFLTE--------------YVATRW 189
Query: 250 YVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
Y APEI + KG+ ++D WS+G +L EML F G + IL ++G P+
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPS 245
Query: 309 -------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIK 332
P +N L+ ++L +P KRI VE+
Sbjct: 246 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 305
Query: 333 GHEFFK 338
H + +
Sbjct: 306 AHPYLE 311
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 122/366 (33%), Gaps = 127/366 (34%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G+V D + A+K I + ++ QR L
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKI------------------SPFEHQTYCQRTL 73
Query: 81 RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R ++ L R ++ + + Y + DL+ L K Q S+D I
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 130
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
+ H+ +++RDLKP N+++
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLL----------------------------- 161
Query: 191 LAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
NT +K C G++ + DP H +V T
Sbjct: 162 ---NTTCDLK--------ICDFGLARVADPDHDHTGFLTE--------------YVATRW 196
Query: 250 YVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
Y APEI + KG+ ++D WS+G +L EML F G + IL ++G P+
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPS 252
Query: 309 -------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIK 332
P +N L+ ++L +P KRI VE+
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 333 GHEFFK 338
H + +
Sbjct: 313 AHPYLE 318
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 89/265 (33%), Gaps = 99/265 (37%)
Query: 112 DLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVD 171
DL+ L K Q S+D I + H+ +++RDLKP N++I
Sbjct: 131 DLYKLLKSQQ---LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLI---------- 177
Query: 172 FDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXX 230
NT +K C G++ + DP H
Sbjct: 178 ----------------------NTTCDLK--------ICDFGLARIADPEHDHTGFLTEX 207
Query: 231 XXXXXXXXXXXXXFVGTEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSR 289
V T Y APEI + KG+ ++D WS+G +L EML F G
Sbjct: 208 --------------VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 253
Query: 290 KETFYRILCRPPDLVGEPT----------PLRN--------------------------L 313
+ IL ++G P+ RN L
Sbjct: 254 LDQLNHIL----GILGSPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDL 309
Query: 314 IRRLLEKDPTKRIGVEEIKGHEFFK 338
+ R+L +P KRI VEE H + +
Sbjct: 310 LDRMLTFNPNKRITVEEALAHPYLE 334
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 72/172 (41%), Gaps = 25/172 (14%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
+G G+ GVV+ K +S E A+K + + K N E +++R
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVL------QGKAFKNR-----------ELQIMRK 69
Query: 83 VEHPLLPRLRGVLST------DKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXX 135
++H + RLR + + ++ +DY P R +++Q ++
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
H+ GI +RD+KP+N+++ + ++ L DF + +L P S
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 49/129 (37%), Gaps = 39/129 (30%)
Query: 244 FVGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
++ + Y APE+I G + ++D WS G VL E+L G F G S + I+
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII----K 237
Query: 303 LVGEPT----------------------PLRNLIR------------RLLEKDPTKRIGV 328
++G PT P + R RLLE PT R+
Sbjct: 238 VLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTP 297
Query: 329 EEIKGHEFF 337
E H FF
Sbjct: 298 LEACAHSFF 306
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 72/172 (41%), Gaps = 25/172 (14%)
Query: 23 ALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRN 82
+G G+ GVV+ K +S E A+K + + K N E +++R
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVL------QGKAFKNR-----------ELQIMRK 69
Query: 83 VEHPLLPRLRGVLST------DKFVGYAIDYCPGRDLHSLRK-QQSEQMFSDDTIRFXXX 135
++H + RLR + + ++ +DY P R +++Q ++
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIM-LVDFDLSTKLSPKTPQAS 186
H+ GI +RD+KP+N+++ + ++ L DF + +L P S
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 49/129 (37%), Gaps = 39/129 (30%)
Query: 244 FVGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
++ + Y APE+I G + ++D WS G VL E+L G F G S + I+
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII----K 237
Query: 303 LVGEPT----------------------PLRNLIR------------RLLEKDPTKRIGV 328
++G PT P + R RLLE PT R+
Sbjct: 238 VLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTP 297
Query: 329 EEIKGHEFF 337
E H FF
Sbjct: 298 LEACAHSFF 306
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 122/366 (33%), Gaps = 127/366 (34%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G+V D + A+K I + ++ QR L
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKI------------------SPFEHQTYCQRTL 73
Query: 81 RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R ++ L R ++ + + Y + DL+ L K Q S+D I
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH---LSNDHI 130
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
+ H+ +++RDLKP N+++
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLL----------------------------- 161
Query: 191 LAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
NT +K C G++ + DP H +V T
Sbjct: 162 ---NTTCDLK--------ICDFGLARVADPDHDHTGFLTE--------------YVATRW 196
Query: 250 YVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
Y APEI + KG+ ++D WS+G +L EML F G + IL ++G P+
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPS 252
Query: 309 -------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIK 332
P +N L+ ++L +P KRI VE+
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 333 GHEFFK 338
H + +
Sbjct: 313 AHPYLE 318
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++D L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLA 172
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 237
Query: 303 LVGEP 307
LVG P
Sbjct: 238 LVGTP 242
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G V D ++ A+K K S+ + + + R E R+L
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVK--------KLSRPFQSIIHAKRTYR---ELRLL 75
Query: 81 RNVEHP----LLPRLRGVLSTDKFVG-YAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
++++H LL S ++F Y + + G DL+++ K Q +DD ++F
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIY 132
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ I++RDLKP N+ + E+ + ++D L+
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLA 172
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPD 302
+V T Y APEI+ H + VD WS+G ++ E+L G T F G+ + IL
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL----R 237
Query: 303 LVGEP 307
LVG P
Sbjct: 238 LVGTP 242
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 114/324 (35%), Gaps = 66/324 (20%)
Query: 11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKY 70
+ ++ SC+ I +G G G V S LK+ + + K L +
Sbjct: 17 KEIEASCITIERVIGAGEFGEVC---------SGRLKLPGKRELPVAIKTLKVGYTEKQR 67
Query: 71 RRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R E ++ +HP + L GV++ K V +Y L + K+ Q F+ +
Sbjct: 68 RDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ-FTVIQL 126
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
+MG V+RDL NI+I N + DF LS L P+A
Sbjct: 127 VGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLE-DDPEA----- 180
Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEY 250
A TR G + P+ +
Sbjct: 181 -AYTTRGG------------------KIPIR----------------------------W 193
Query: 251 VAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL--CRPPDLVGEP 307
APE I + A D WS G+V+ E++ YG P+ + ++ + R P + P
Sbjct: 194 TAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPMDCP 253
Query: 308 TPLRNLIRRLLEKDPTKRIGVEEI 331
L L+ +K+ R +EI
Sbjct: 254 AALYQLMLDCWQKERNSRPKFDEI 277
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 74/366 (20%), Positives = 121/366 (33%), Gaps = 127/366 (34%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G+V D + A+K I + ++ QR L
Sbjct: 26 LSYIGEGAYGMVCSAYDNLNKVRVAIKKI------------------SPFEHQTYCQRTL 67
Query: 81 RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R ++ L R ++ + + Y + DL+ L K Q S+D I
Sbjct: 68 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 124
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
+ H+ +++RDLKP N+++
Sbjct: 125 CYFLYQILRGLKYIHSANVLHRDLKPSNLLL----------------------------- 155
Query: 191 LAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
NT +K C G++ + DP H +V T
Sbjct: 156 ---NTTCDLK--------ICDFGLARVADPDHDHTGFLTE--------------YVATRW 190
Query: 250 YVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP- 307
Y APEI + KG+ ++D WS+G +L EML F G + IL ++G P
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPE 246
Query: 308 ------------------TPLRN-----------------LIRRLLEKDPTKRIGVEEIK 332
P +N L+ ++L +P KRI VE+
Sbjct: 247 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 306
Query: 333 GHEFFK 338
H + +
Sbjct: 307 AHPYLE 312
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 29/150 (19%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV 304
V T Y APE+I G G+ VD WS+G ++ EM+ F G + + +++ + +
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVI----EQL 241
Query: 305 GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHEN 362
G P P +++L PT R VE + G ++E L P++ PA EH N
Sbjct: 242 GTPCP--EFMKKL---QPTVRTYVE---NRPKYAGYSFEKLF-----PDVLFPADSEH-N 287
Query: 363 NESDGRGR---------DGTKEIDVEKFVQ 383
+ R D +K I V++ +Q
Sbjct: 288 KLKASQARDLLSKMLVIDASKRISVDEALQ 317
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 80
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 140
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKXV 80
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIK 140
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+V T Y APE+I G G+ VD WS+G ++ EM+ F G + + +++ +
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI----EQ 240
Query: 304 VGEPTP-----LRNLIRRLLEKDP 322
+G P P L+ +R +E P
Sbjct: 241 LGTPCPEFMKKLQPTVRNYVENRP 264
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKXV 80
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIK 140
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+V T Y APE+I G G+ VD WS+G ++ EM+ F G + + +++ +
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI----EQ 240
Query: 304 VGEPTP-----LRNLIRRLLEKDP 322
+G P P L+ +R +E P
Sbjct: 241 LGTPCPEFMKKLQPTVRNYVENRP 264
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 119 QQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTK 177
+Q Q +D IRF H+MGI++RD+KP N+MI E+ + L+D+ L+
Sbjct: 122 KQLRQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 178 LSP 180
P
Sbjct: 182 YHP 184
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 245 VGTEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATP-FRGSSRKETFYRI 296
V + + PE+ ++ + +D+++D WSLG +L M++ P F G + RI
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 245
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 73
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 74 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIK 133
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 134 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 166
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+V T Y APE+I G G+ VD WS+G ++ EM+ F G + + +++ +
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI----EQ 233
Query: 304 VGEPTP-----LRNLIRRLLEKDP 322
+G P P L+ +R +E P
Sbjct: 234 LGTPCPEFMKKLQPTVRNYVENRP 257
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 73/366 (19%), Positives = 122/366 (33%), Gaps = 127/366 (34%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G+V D + A++ I + ++ QR L
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIRKI------------------SPFEHQTYCQRTL 73
Query: 81 RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R ++ L R ++ + + Y + DL+ L K Q S+D I
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 130
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
+ H+ +++RDLKP N+++
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLL----------------------------- 161
Query: 191 LAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
NT +K C G++ + DP H +V T
Sbjct: 162 ---NTTCDLK--------ICDFGLARVADPDHDHTGFLTE--------------YVATRW 196
Query: 250 YVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
Y APEI + KG+ ++D WS+G +L EML F G + IL ++G P+
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPS 252
Query: 309 -------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIK 332
P +N L+ ++L +P KRI VE+
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 333 GHEFFK 338
H + +
Sbjct: 313 AHPYLE 318
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 80
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIK 140
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+V T Y APE+I G G+ VD WS+G ++ EM+ F G + + +++ +
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI----EQ 240
Query: 304 VGEPTP-----LRNLIRRLLEKDP 322
+G P P L+ +R +E P
Sbjct: 241 LGTPCPEFMKKLQPTVRNYVENRP 264
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 119 QQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTK 177
+Q Q +D IRF H+MGI++RD+KP N+MI E+ + L+D+ L+
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 178 LSP 180
P
Sbjct: 182 YHP 184
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 245 VGTEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATP-FRGSSRKETFYRI 296
V + + PE+ ++ + +D+++D WSLG +L M++ P F G + RI
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 245
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 119 QQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTK 177
+Q Q +D IRF H+MGI++RD+KP N+MI E+ + L+D+ L+
Sbjct: 120 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 179
Query: 178 LSP 180
P
Sbjct: 180 YHP 182
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 245 VGTEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATP-FRGSSRKETFYRI 296
V + + PE+ ++ + +D+++D WSLG +L M++ P F G + RI
Sbjct: 190 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 243
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 119 QQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTK 177
+Q Q +D IRF H+MGI++RD+KP N+MI E+ + L+D+ L+
Sbjct: 127 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 186
Query: 178 LSP 180
P
Sbjct: 187 YHP 189
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 245 VGTEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATP-FRGSSRKETFYRI 296
V + + PE+ ++ + +D+++D WSLG +L M++ P F G + RI
Sbjct: 197 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 250
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 50/139 (35%), Gaps = 45/139 (32%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY---RILCRP 300
V T Y APE+I G D WS+G +L E G T F KE RIL
Sbjct: 194 LVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPL 253
Query: 301 PDLVGEPT----------------------------PLR--------------NLIRRLL 318
P + + T PL+ +LI+++L
Sbjct: 254 PKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKML 313
Query: 319 EKDPTKRIGVEEIKGHEFF 337
E DP KRI + E H FF
Sbjct: 314 EYDPAKRITLREALKHPFF 332
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP---PD 302
G ++APE+I D WS GV+L E+L G PFRG Y + P
Sbjct: 176 GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPI 235
Query: 303 LVGEPTPLRNLIRRLLEKDPTKR 325
P P L+ DP R
Sbjct: 236 PSTCPEPFAKLMEDCWNPDPHSR 258
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 119 QQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTK 177
+Q Q +D IRF H+MGI++RD+KP N+MI E+ + L+D+ L+
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 178 LSP 180
P
Sbjct: 182 YHP 184
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 245 VGTEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPF 284
V + + PE+ ++ + +D+++D WSLG +L M++ PF
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 119 QQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTK 177
+Q Q +D IRF H+MGI++RD+KP N+MI E+ + L+D+ L+
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 178 LSP 180
P
Sbjct: 182 YHP 184
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 245 VGTEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPF 284
V + + PE+ ++ + +D+++D WSLG +L M++ PF
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 119 QQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTK 177
+Q Q +D IRF H+MGI++RD+KP N+MI E+ + L+D+ L+
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 178 LSP 180
P
Sbjct: 182 YHP 184
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 245 VGTEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPF 284
V + + PE+ ++ + +D+++D WSLG +L M++ PF
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 119 QQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTK 177
+Q Q +D IRF H+MGI++RD+KP N+MI E+ + L+D+ L+
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 178 LSP 180
P
Sbjct: 182 YHP 184
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 245 VGTEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPF 284
V + + PE+ ++ + +D+++D WSLG +L M++ PF
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 119 QQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTK 177
+Q Q +D IRF H+MGI++RD+KP N+MI E+ + L+D+ L+
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 178 LSP 180
P
Sbjct: 182 YHP 184
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 245 VGTEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPF 284
V + + PE+ ++ + +D+++D WSLG +L M++ PF
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 118
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 119 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 178
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+V T Y APE+I G G+ VD WS+G ++ EM+ F G + + +++ +
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI----EQ 278
Query: 304 VGEPTP-----LRNLIRRLLEKDP 322
+G P P L+ +R +E P
Sbjct: 279 LGTPCPEFMKKLQPTVRNYVENRP 302
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 119 QQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTK 177
+Q Q +D IRF H+MGI++RD+KP N+MI E+ + L+D+ L+
Sbjct: 121 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 180
Query: 178 LSP 180
P
Sbjct: 181 YHP 183
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 245 VGTEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPF 284
V + + PE+ ++ + +D+++D WSLG +L M++ PF
Sbjct: 191 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 231
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 74
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 75 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 134
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 135 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+V T Y APE+I G G+ VD WS+G ++ EM+ F G + + +++ +
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI----EQ 234
Query: 304 VGEPTP-----LRNLIRRLLEKDP 322
+G P P L+ +R +E P
Sbjct: 235 LGTPCPEFMKKLQPTVRNYVENRP 258
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI-----LCRPPD 302
+++APE I + A D W GV + E+L +G PF+G + RI L PP+
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 616
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
P L +L+ + DP++R E+K
Sbjct: 617 C---PPTLYSLMTKCWAYDPSRRPRFTELKAQ 645
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 9/135 (6%)
Query: 56 KKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS 115
K K T++ +K+ + E +R +HP + +L GV+ T+ V ++ C L
Sbjct: 424 KTCKNCTSDSVREKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELC---TLGE 476
Query: 116 LRKQQSEQMFSDD--TIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFD 173
LR + FS D ++ + V+RD+ N+++ N + L DF
Sbjct: 477 LRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG 536
Query: 174 LSTKLSPKTPQASPK 188
LS + T + K
Sbjct: 537 LSRYMEDSTYYKASK 551
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 119 QQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTK 177
+Q Q +D IRF H+MGI++RD+KP N+MI E+ + L+D+ L+
Sbjct: 121 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 180
Query: 178 LSP 180
P
Sbjct: 181 YHP 183
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 245 VGTEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATP-FRGSSRKETFYRI 296
V + + PE+ ++ + +D+++D WSLG +L M++ P F G + RI
Sbjct: 191 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 244
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 119 QQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTK 177
+Q Q +D IRF H+MGI++RD+KP N+MI E+ + L+D+ L+
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 178 LSP 180
P
Sbjct: 182 YHP 184
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 245 VGTEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPF 284
V + + PE+ ++ + +D+++D WSLG +L M++ PF
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 119 QQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTK 177
+Q Q +D IRF H+MGI++RD+KP N+MI E+ + L+D+ L+
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
Query: 178 LSP 180
P
Sbjct: 182 YHP 184
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 245 VGTEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATP-FRGSSRKETFYRI 296
V + + PE+ ++ + +D+++D WSLG +L M++ P F G + RI
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 245
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 118
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 119 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 178
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+V T Y APE+I G G+ VD WS+G ++ EM+ F G + + +++ +
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI----EQ 278
Query: 304 VGEPTP-----LRNLIRRLLEKDP 322
+G P P L+ +R +E P
Sbjct: 279 LGTPCPEFMKKLQPTVRNYVENRP 302
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI-----LCRPPD 302
+++APE I + A D W GV + E+L +G PF+G + RI L PP+
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 616
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
P L +L+ + DP++R E+K
Sbjct: 617 C---PPTLYSLMTKCWAYDPSRRPRFTELKAQ 645
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 9/135 (6%)
Query: 56 KKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS 115
K K T++ +K+ + E +R +HP + +L GV+ T+ V ++ C L
Sbjct: 424 KTCKNCTSDSVREKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELC---TLGE 476
Query: 116 LRKQQSEQMFSDD--TIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFD 173
LR + FS D ++ + V+RD+ N+++ + L DF
Sbjct: 477 LRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFG 536
Query: 174 LSTKLSPKTPQASPK 188
LS + T + K
Sbjct: 537 LSRYMEDSTYYKASK 551
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 81
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 82 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 141
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 142 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+V T Y APE+I G G+ VD WS+G ++ EM+ F G + + +++ +
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI----EQ 241
Query: 304 VGEPTP-----LRNLIRRLLEKDP 322
+G P P L+ +R +E P
Sbjct: 242 LGTPCPEFMKKLQPTVRNYVENRP 265
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 73
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 74 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 133
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 134 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 166
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+V T Y APE+I G G+ VD WS+G ++ EM+ F G + + +++ +
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI----EQ 233
Query: 304 VGEPTP-----LRNLIRRLLEKDP 322
+G P P L+ +R +E P
Sbjct: 234 LGTPCPEFMKKLQPTVRNYVENRP 257
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 79
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 80 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 139
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 140 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 172
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+V T Y APE+I G G+ VD WS+G ++ EM+ F G + + +++ +
Sbjct: 184 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI----EQ 239
Query: 304 VGEPTP-----LRNLIRRLLEKDP 322
+G P P L+ +R +E P
Sbjct: 240 LGTPCPEFMKKLQPTVRNYVENRP 263
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 80
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 140
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+V T Y APE+I G G+ VD WS+G ++ EM+ F G + + +++ +
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI----EQ 240
Query: 304 VGEPTP-----LRNLIRRLLEKDP 322
+G P P L+ +R +E P
Sbjct: 241 LGTPCPEFMKKLQPTVRNYVENRP 264
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 74
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 75 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 134
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 135 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+V T Y APE+I G G+ VD WS+G ++ EM+ F G + + +++ +
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI----EQ 234
Query: 304 VGEPTP-----LRNLIRRLLEKDP 322
+G P P L+ +R +E P
Sbjct: 235 LGTPCPEFMKKLQPTVRNYVENRP 258
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI-----LCRPPD 302
+++APE I + A D W GV + E+L +G PF+G + RI L PP+
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 236
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
P L +L+ + DP++R E+K
Sbjct: 237 C---PPTLYSLMTKCWAYDPSRRPRFTELKAQ 265
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 9/135 (6%)
Query: 56 KKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS 115
K K T++ +K+ + E +R +HP + +L GV+ T+ V ++ C L
Sbjct: 44 KTCKNCTSDSVREKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELC---TLGE 96
Query: 116 LRKQQSEQMFSDD--TIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFD 173
LR + FS D ++ + V+RD+ N+++ N + L DF
Sbjct: 97 LRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG 156
Query: 174 LSTKLSPKTPQASPK 188
LS + T + K
Sbjct: 157 LSRYMEDSTXXKASK 171
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 80
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 140
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+V T Y APE+I G G+ VD WS+G ++ EM+ F G + + +++ +
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI----EQ 240
Query: 304 VGEPTP-----LRNLIRRLLEKDP 322
+G P P L+ +R +E P
Sbjct: 241 LGTPCPEFMKKLQPTVRNYVENRP 264
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 81
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 82 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 141
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 142 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+V T Y APE+I G G+ VD WS+G ++ EM+ F G + + +++ +
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI----EQ 241
Query: 304 VGEPTP-----LRNLIRRLLEKDP 322
+G P P L+ +R +E P
Sbjct: 242 LGTPCPEFMKKLQPTVRNYVENRP 265
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 127/357 (35%), Gaps = 78/357 (21%)
Query: 11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKY 70
+ +D SC++I +G G G V S LKV + I K L +
Sbjct: 9 KEIDASCIKIEKVIGVGEFGEVC---------SGRLKVPGKREICVAIKTLKAGYTDKQR 59
Query: 71 RRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDT 129
R E ++ +HP + L GV++ K V +Y L + LRK F+
Sbjct: 60 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR--FTVIQ 117
Query: 130 IRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
+ +M V+RDL NI++ N + DF +S L P+A
Sbjct: 118 LVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLE-DDPEA---- 172
Query: 190 VLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
A TR G + P+
Sbjct: 173 --AYTTRGG------------------KIPIR---------------------------- 184
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETFYRIL--CRPPDLVGE 306
+ APE I + A D WS G+V+ E M YG P+ S ++ I R P +
Sbjct: 185 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDC 244
Query: 307 PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENN 363
P L L+ +K+ + R +F + VN +L K+ R PN R E++
Sbjct: 245 PIALHQLMLDCWQKERSDR--------PKFGQIVN--MLDKLIRNPNSLKRTGSESS 291
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI-----LCRPPD 302
+++APE I + A D W GV + E+L +G PF+G + RI L PP+
Sbjct: 205 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 264
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
P L +L+ + DP++R E+K
Sbjct: 265 C---PPTLYSLMTKCWAYDPSRRPRFTELKAQ 293
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 5/127 (3%)
Query: 56 KKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS 115
K K T++ +K+ + E +R +HP + +L GV+ T+ V ++ C +L S
Sbjct: 72 KTCKNCTSDSVREKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRS 127
Query: 116 LRKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+ + + I + + V+RD+ N+++ N + L DF LS
Sbjct: 128 FLQVRKYSLDLASLILYAYQLSTALAYL-ESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 186
Query: 176 TKLSPKT 182
+ T
Sbjct: 187 RYMEDST 193
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 127/357 (35%), Gaps = 78/357 (21%)
Query: 11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKY 70
+ +D SC++I +G G G V S LKV + I K L +
Sbjct: 24 KEIDASCIKIEKVIGVGEFGEVC---------SGRLKVPGKREICVAIKTLKAGYTDKQR 74
Query: 71 RRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDT 129
R E ++ +HP + L GV++ K V +Y L + LRK F+
Sbjct: 75 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR--FTVIQ 132
Query: 130 IRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
+ +M V+RDL NI++ N + DF +S L P+A
Sbjct: 133 LVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLE-DDPEA---- 187
Query: 190 VLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
A TR G + P+
Sbjct: 188 --AYTTRGG------------------KIPIR---------------------------- 199
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETFYRIL--CRPPDLVGE 306
+ APE I + A D WS G+V+ E M YG P+ S ++ I R P +
Sbjct: 200 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDC 259
Query: 307 PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENN 363
P L L+ +K+ + R +F + VN +L K+ R PN R E++
Sbjct: 260 PIALHQLMLDCWQKERSDR--------PKFGQIVN--MLDKLIRNPNSLKRTGSESS 306
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI-----LCRPPD 302
+++APE I + A D W GV + E+L +G PF+G + RI L PP+
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 236
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
P L +L+ + DP++R E+K
Sbjct: 237 C---PPTLYSLMTKCWAYDPSRRPRFTELKAQ 265
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 56/133 (42%), Gaps = 5/133 (3%)
Query: 56 KKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS 115
K K T++ +K+ + E +R +HP + +L GV+ T+ V ++ C +L S
Sbjct: 44 KTCKNCTSDSVREKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRS 99
Query: 116 LRKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+ + + I + + V+RD+ N+++ N + L DF LS
Sbjct: 100 FLQVRKYSLDLASLILYAYQLSTALAYL-ESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
Query: 176 TKLSPKTPQASPK 188
+ T + K
Sbjct: 159 RYMEDSTYYKASK 171
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI-----LCRPPD 302
+++APE I + A D W GV + E+L +G PF+G + RI L PP+
Sbjct: 179 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 238
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
P L +L+ + DP++R E+K
Sbjct: 239 C---PPTLYSLMTKCWAYDPSRRPRFTELKAQ 267
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 5/127 (3%)
Query: 56 KKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS 115
K K T++ +K+ + E +R +HP + +L GV+ T+ V ++ C +L S
Sbjct: 46 KTCKNCTSDSVREKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRS 101
Query: 116 LRKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+ + + I + + V+RD+ N+++ N + L DF LS
Sbjct: 102 FLQVRKYSLDLASLILYAYQLSTALAYL-ESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 160
Query: 176 TKLSPKT 182
+ T
Sbjct: 161 RYMEDST 167
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI-----LCRPPD 302
+++APE I + A D W GV + E+L +G PF+G + RI L PP+
Sbjct: 174 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 233
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
P L +L+ + DP++R E+K
Sbjct: 234 C---PPTLYSLMTKCWAYDPSRRPRFTELKAQ 262
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 5/127 (3%)
Query: 56 KKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS 115
K K T++ +K+ + E +R +HP + +L GV+ T+ V ++ C +L S
Sbjct: 41 KTCKNCTSDSVREKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRS 96
Query: 116 LRKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+ + + I + + V+RD+ N+++ N + L DF LS
Sbjct: 97 FLQVRKYSLDLASLILYAYQLSTALAYL-ESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 155
Query: 176 TKLSPKT 182
+ T
Sbjct: 156 RYMEDST 162
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKXV 80
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 140
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
+V T Y APE+I G G+ VD WS+G ++ EM+ F G + + +++ +
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI----EQ 240
Query: 304 VGEPTP-----LRNLIRRLLEKDP 322
+G P P L+ +R +E P
Sbjct: 241 LGTPCPEFMKKLQPTVRNYVENRP 264
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI-----LCRPPD 302
+++APE I + A D W GV + E+L +G PF+G + RI L PP+
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 236
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
P L +L+ + DP++R E+K
Sbjct: 237 C---PPTLYSLMTKCWAYDPSRRPRFTELKAQ 265
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 56/133 (42%), Gaps = 5/133 (3%)
Query: 56 KKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS 115
K K T++ +K+ + E +R +HP + +L GV+ T+ V ++ C +L S
Sbjct: 44 KTCKNCTSDSVREKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRS 99
Query: 116 LRKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+ + + I + + V+RD+ N+++ N + L DF LS
Sbjct: 100 FLQVRKYSLDLASLILYAYQLSTALAYL-ESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
Query: 176 TKLSPKTPQASPK 188
+ T + K
Sbjct: 159 RYMEDSTYYKASK 171
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI-----LCRPPD 302
+++APE I + A D W GV + E+L +G PF+G + RI L PP+
Sbjct: 182 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 241
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
P L +L+ + DP++R E+K
Sbjct: 242 C---PPTLYSLMTKCWAYDPSRRPRFTELKAQ 270
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 56/133 (42%), Gaps = 5/133 (3%)
Query: 56 KKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS 115
K K T++ +K+ + E +R +HP + +L GV+ T+ V ++ C +L S
Sbjct: 49 KTCKNCTSDSVREKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRS 104
Query: 116 LRKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+ + + I + + V+RD+ N+++ N + L DF LS
Sbjct: 105 FLQVRKYSLDLASLILYAYQLSTALAYL-ESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 163
Query: 176 TKLSPKTPQASPK 188
+ T + K
Sbjct: 164 RYMEDSTYYKASK 176
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI-----LCRPPD 302
+++APE I + A D W GV + E+L +G PF+G + RI L PP+
Sbjct: 180 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 239
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
P L +L+ + DP++R E+K
Sbjct: 240 C---PPTLYSLMTKCWAYDPSRRPRFTELKAQ 268
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 5/127 (3%)
Query: 56 KKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS 115
K K T++ +K+ + E +R +HP + +L GV+ T+ V ++ C +L S
Sbjct: 47 KTCKNCTSDSVREKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRS 102
Query: 116 LRKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+ + + I + + V+RD+ N+++ N + L DF LS
Sbjct: 103 FLQVRKYSLDLASLILYAYQLSTALAYL-ESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 161
Query: 176 TKLSPKT 182
+ T
Sbjct: 162 RYMEDST 168
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 23/163 (14%)
Query: 20 IVSALGRGAKGVVFLVKDVESSESFALKVIWR---DLIEKKSKELTNNDNGDKYRRISFE 76
I +GRG+ G V+L D ++++ A+K + R DLI+ K RI E
Sbjct: 32 IKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCK--------------RILRE 77
Query: 77 QRVLRNVEHPLLPRLRGVLSTDKFVG----YAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
+L ++ + RL ++ + + Y + DL L K + ++ ++
Sbjct: 78 ITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFK--TPIFLTEQHVKT 135
Query: 133 XXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H GI++RDLKP N ++ ++ + + DF L+
Sbjct: 136 ILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLA 178
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 9/92 (9%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI-----LCRPPD 302
+++APE I + A D W GV + E+L +G PF+G + RI L PP+
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 236
Query: 303 LVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGH 334
P L +L+ + DP++R E+K
Sbjct: 237 C---PPTLYSLMTKCWAYDPSRRPRFTELKAQ 265
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 9/135 (6%)
Query: 56 KKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS 115
K K T++ +K+ + E +R +HP + +L GV+ T+ V ++ C L
Sbjct: 44 KTCKNCTSDSVREKFLQ---EALTMRQFDHPHIVKLIGVI-TENPVWIIMELC---TLGE 96
Query: 116 LRKQQSEQMFSDD--TIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFD 173
LR + FS D ++ + V+RD+ N+++ + L DF
Sbjct: 97 LRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFG 156
Query: 174 LSTKLSPKTPQASPK 188
LS + T + K
Sbjct: 157 LSRYMEDSTYYKASK 171
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 128/357 (35%), Gaps = 78/357 (21%)
Query: 11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKY 70
+ +D SC++I +G G G V S LKV + I K L +
Sbjct: 3 KEIDASCIKIEKVIGVGEFGEVC---------SGRLKVPGKREICVAIKTLKAGYTDKQR 53
Query: 71 RRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDT 129
R E ++ +HP + L GV++ K V +Y L + LRK F+
Sbjct: 54 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR--FTVIQ 111
Query: 130 IRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKT 189
+ +M V+RDL NI++ N + DF +S L P+A
Sbjct: 112 LVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLE-DDPEA---- 166
Query: 190 VLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
A TR G + P+
Sbjct: 167 --AYTTRGG------------------KIPIR---------------------------- 178
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL--CRPPDLVGE 306
+ APE I + A D WS G+V+ E++ YG P+ S ++ I R P +
Sbjct: 179 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDC 238
Query: 307 PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENN 363
P L L+ +K+ + R +F + VN +L K+ R PN R E++
Sbjct: 239 PIALHQLMLDCWQKERSDR--------PKFGQIVN--MLDKLIRNPNSLKRTGSESS 285
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 89/253 (35%), Gaps = 57/253 (22%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E ++ +HP + RL GV++ + +Y L + + Q F+ +
Sbjct: 100 EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ-FTIMQLVGMLR 158
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANT 195
++G V+RDL N+++ N + DF LS L + P AA T
Sbjct: 159 GVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL-----EDDPD---AAXT 210
Query: 196 RSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEI 255
+G K P+ + APE
Sbjct: 211 TTGGKI-----------------PI----------------------------RWTAPEA 225
Query: 256 IEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL--CRPPDLVGEPTPLRN 312
I + A D WS GVV+ E+L YG P+ + ++ + R P +G P L
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQ 285
Query: 313 LIRRLLEKDPTKR 325
L+ KD +R
Sbjct: 286 LMLDCWHKDRAQR 298
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 123/366 (33%), Gaps = 127/366 (34%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G+V D + A+K I + ++ QR L
Sbjct: 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKI------------------SPFEHQTYCQRTL 73
Query: 81 RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R ++ L R ++ + + Y + DL+ L K Q S+D I
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 130
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
+ H+ +++RDLKP N+++
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLL----------------------------- 161
Query: 191 LAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
NT +K C G++ + DP H V T
Sbjct: 162 ---NTTCDLK--------ICDFGLARVADPDHDHTGFLXEX--------------VATRW 196
Query: 250 YVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
Y APEI + KG+ ++D WS+G +L EML F G + IL ++G P+
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPS 252
Query: 309 -------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIK 332
P +N L+ ++L +P KRI VE+
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 333 GHEFFK 338
H + +
Sbjct: 313 AHPYLE 318
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 123/366 (33%), Gaps = 127/366 (34%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S +G GA G+V D + A+K I + ++ QR L
Sbjct: 33 LSYIGEGAYGMVCSAYDNLNKVRVAIKKI------------------SPFEHQTYCQRTL 74
Query: 81 RNVEHPLLPRLRGVLSTDKFVG----------YAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R ++ L R ++ + + Y + DL+ L K Q S+D I
Sbjct: 75 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHI 131
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
+ H+ +++RDLKP N+++
Sbjct: 132 CYFLYQILRGLKYIHSANVLHRDLKPSNLLL----------------------------- 162
Query: 191 LAANTRSGIKKRRSFLSKFCSSGIS-LEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEE 249
NT +K C G++ + DP H V T
Sbjct: 163 ---NTTCDLK--------ICDFGLARVADPDHDHTGFLXEX--------------VATRW 197
Query: 250 YVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
Y APEI + KG+ ++D WS+G +L EML F G + IL ++G P+
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL----GILGSPS 253
Query: 309 -------------------PLRN-----------------LIRRLLEKDPTKRIGVEEIK 332
P +N L+ ++L +P KRI VE+
Sbjct: 254 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 313
Query: 333 GHEFFK 338
H + +
Sbjct: 314 AHPYLE 319
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 109/319 (34%), Gaps = 77/319 (24%)
Query: 19 RIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR 78
R+ LG+G G VF + A+KVI R+ + S +D+ ++ +
Sbjct: 34 RLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSP---LSDSVTCPLEVALLWK 90
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDY-CPGRDLHSLRKQQSEQMFSDDTIRFXXXXX 137
V HP + RL T + ++ P +DL ++ + R
Sbjct: 91 VGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP--LGEGPSRCFFGQV 148
Query: 138 XXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRS 197
H+ G+V+RD+K ENI+I + R
Sbjct: 149 VAAIQHCHSRGVVHRDIKDENILI--------------------------------DLRR 176
Query: 198 GIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIE 257
G K F SG L D + F GT Y PE I
Sbjct: 177 GCAKLIDF-----GSGALLHDEPYTD--------------------FDGTRVYSPPEWIS 211
Query: 258 -GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRP----PDLVGEPTPLRN 312
+ H WSLG++L++M+ G PF +E L P PD
Sbjct: 212 RHQYHALPATVWSLGILLYDMVCGDIPFE--RDQEILEAELHFPAHVSPDCCA------- 262
Query: 313 LIRRLLEKDPTKRIGVEEI 331
LIRR L P+ R +EEI
Sbjct: 263 LIRRCLAPKPSSRPSLEEI 281
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 12/69 (17%)
Query: 246 GTEEYVAPEIIE--------GKGHDFAVDWWSLGVVLHEMLYGATPFR---GSSR-KETF 293
GTEEY+ P++ E K + VD WS+GV + G+ PFR G R KE
Sbjct: 177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVM 236
Query: 294 YRILCRPPD 302
Y+I+ P
Sbjct: 237 YKIITGKPS 245
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 25/165 (15%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR---VL 80
LG+GA VF + ++ + FA+KV +N R + + R VL
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVF---------------NNISFLRPVDVQMREFEVL 61
Query: 81 RNVEHPLLPRLRGVL--STDKFVGYAIDYCPGRDLHSLRKQQSEQM-FSDDTIRFXXXXX 137
+ + H + +L + +T + +++CP L+++ ++ S +
Sbjct: 62 KKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDV 121
Query: 138 XXXXXXXHNMGIVYRDLKPENIM--IQENGHIM--LVDFDLSTKL 178
GIV+R++KP NIM I E+G + L DF + +L
Sbjct: 122 VGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 118/306 (38%), Gaps = 99/306 (32%)
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX-------- 135
+HP + R +TD+F+ A++ C +L L + ++ SD+ ++
Sbjct: 67 DHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKN---VSDENLKLQKEYNPISLLR 122
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQ-------------ENGHIMLVDFDLSTKLSPKT 182
H++ I++RDLKP+NI++ EN I++ DF L KL +
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD--S 180
Query: 183 PQASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXX 242
Q+S +T +L +P
Sbjct: 181 GQSSFRT-------------------------NLNNP----------------------- 192
Query: 243 XFVGTEEYVAPEIIEGKGH-------DFAVDWWSLGVVLHEMLY-GATPFRGS-SRKETF 293
GT + APE++E + ++D +S+G V + +L G PF SR+
Sbjct: 193 --SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNI 250
Query: 294 YR-------ILC-RPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF--KGVNWE 343
R + C L+ E T +LI ++++ DP KR ++ H F K E
Sbjct: 251 IRGIFSLDEMKCLHDRSLIAEAT---DLISQMIDHDPLKRPTAMKVLRHPLFWPKSKKLE 307
Query: 344 LLLKIS 349
LLK+S
Sbjct: 308 FLLKVS 313
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISF-EQRVLRN 82
LG G V+ +D +++ A+K K K ++ D R + E ++L+
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIK---------KIKLGHRSEAKDGINRTALREIKLLQE 68
Query: 83 VEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
+ HP + L + D+ DL + K S + + I+
Sbjct: 69 LSHPNIIGLLDAFGHKSNISLVFDFME-TDLEVIIKDNS-LVLTPSHIKAYMLMTLQGLE 126
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H I++RDLKP N+++ ENG + L DF L+
Sbjct: 127 YLHQHWILHRDLKPNNLLLDENGVLKLADFGLA 159
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 245 VGTEEYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
V T Y APE++ G + + VD W++G +L E+L G S + RI +
Sbjct: 173 VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIF----ET 228
Query: 304 VGEPT 308
+G PT
Sbjct: 229 LGTPT 233
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 52/128 (40%), Gaps = 35/128 (27%)
Query: 245 VGTEEYVAPEIIEGK-GHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL------ 297
V T Y APE++ G + AVD W++G ++ EM G F G S + Y I+
Sbjct: 185 VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNL 244
Query: 298 ----------------CRPPDLVGEPTPLR-----------NLIRRLLEKDPTKRIGVEE 330
R P+ + E PL +L ++ L DP KR E
Sbjct: 245 IPRHQELFNKNPVFAGVRLPE-IKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAE 303
Query: 331 IKGHEFFK 338
+ H+FF+
Sbjct: 304 LLHHDFFQ 311
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 25/35 (71%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
H+ I++RD+KPENI++ ++G + L DF + L+
Sbjct: 141 HSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLA 175
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 108/318 (33%), Gaps = 64/318 (20%)
Query: 11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKY 70
+ +D SC++I +G G G V S LK+ + I K L + +
Sbjct: 2 KEIDISCVKIEQVIGAGEFGEVC---------SGHLKLPGKREIFVAIKTLKSGYTEKQR 52
Query: 71 RRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R E ++ +HP + L GV++ V ++ L S +Q Q F+ +
Sbjct: 53 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-FTVIQL 111
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTV 190
+M V+R L NI++ N + DF LS L T + +
Sbjct: 112 VGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA 171
Query: 191 LAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEY 250
L P+ +
Sbjct: 172 LGGKI-----------------------PI----------------------------RW 180
Query: 251 VAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL--CRPPDLVGEP 307
APE I+ + A D WS G+V+ E++ YG P+ + ++ I R P + P
Sbjct: 181 TAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCP 240
Query: 308 TPLRNLIRRLLEKDPTKR 325
+ L L+ +KD R
Sbjct: 241 SALHQLMLDCWQKDRNHR 258
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL 297
+V T Y APE+I H + VD WS+G ++ EML G T F+G + +IL
Sbjct: 183 YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL 237
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 125 FSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
FS++ I++ H+ G+V+RDLKP N+ + E+ + ++DF L+
Sbjct: 123 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA 173
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G GA+G+V D + A+K K S+ N + + R E +++ V
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIK--------KLSRPFQNQTHAKRAYR---ELVLMKCV 80
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD-DTIRFXXXXXXXXXX 142
H + L V + K + D +L Q QM D + + +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 140
Query: 143 XXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP NI+++ + + ++DF L+
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 29/150 (19%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLV 304
V T Y APE+I G G+ VD WS+G ++ EM+ F G + + +++ + +
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVI----EQL 241
Query: 305 GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNI--PARFEHEN 362
G P P +++L PT R VE + G ++E L P++ PA EH N
Sbjct: 242 GTPCP--AFMKKL---QPTVRNYVE---NRPKYAGYSFEKLF-----PDVLFPADSEH-N 287
Query: 363 NESDGRGR---------DGTKEIDVEKFVQ 383
+ R D +K I V++ +Q
Sbjct: 288 KLKASQARDLLSKMLVIDASKRISVDEALQ 317
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 244 FVGTEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL 297
+V T Y APE+I H + VD WS+G ++ EML G T F+G + +IL
Sbjct: 201 YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL 255
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 125 FSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
FS++ I++ H+ G+V+RDLKP N+ + E+ + ++DF L+
Sbjct: 141 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA 191
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 12/68 (17%)
Query: 246 GTEEYVAPEIIE--------GKGHDFAVDWWSLGVVLHEMLYGATPFR---GSSR-KETF 293
GTEEY+ P++ E K + VD WS+GV + G+ PFR G R KE
Sbjct: 177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVM 236
Query: 294 YRILCRPP 301
Y+I+ P
Sbjct: 237 YKIITGKP 244
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 25/165 (15%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQR---VL 80
LG+GA VF + ++ + FA+KV +N R + + R VL
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVF---------------NNISFLRPVDVQMREFEVL 61
Query: 81 RNVEHPLLPRLRGVL--STDKFVGYAIDYCPGRDLHSLRKQQSEQM-FSDDTIRFXXXXX 137
+ + H + +L + +T + +++CP L+++ ++ S +
Sbjct: 62 KKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDV 121
Query: 138 XXXXXXXHNMGIVYRDLKPENIM--IQENGHIM--LVDFDLSTKL 178
GIV+R++KP NIM I E+G + L DF + +L
Sbjct: 122 VGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 55/128 (42%), Gaps = 17/128 (13%)
Query: 258 GKGHDFAVDWWSLGVVLHEMLYGATPFR---------GSSRKETFYRILCRPPDLVGEPT 308
G+ +D + D WSLGV+++ +L G PF G + + P+
Sbjct: 172 GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSE 231
Query: 309 PLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPNIPARFEHENNESDGR 368
++ LIR LL+ +PT+R+ + E H + +++ ++ P P E R
Sbjct: 232 EVKMLIRNLLKTEPTQRMTITEFMNHPW--------IMQSTKVPQTPLHTSRVLKEDKER 283
Query: 369 GRDGTKEI 376
D +E+
Sbjct: 284 WEDVKEEM 291
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 71/177 (40%), Gaps = 25/177 (14%)
Query: 2 NDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL 61
N +++D + S LG G G V + + + E FALK++ ++ EL
Sbjct: 13 NAIIDDYKVTS---------QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVEL 63
Query: 62 TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQS 121
+ R S ++R V+ + + K + ++ G +L S + +
Sbjct: 64 --------HWRASQCPHIVRIVD-----VYENLYAGRKCLLIVMECLDGGELFSRIQDRG 110
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQE---NGHIMLVDFDLS 175
+Q F++ H++ I +RD+KPEN++ N + L DF +
Sbjct: 111 DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 119 QQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTK 177
+Q Q +D IRF H+MGI++RD+KP N++I E+ + L+D+ L+
Sbjct: 122 KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEF 181
Query: 178 LSP 180
P
Sbjct: 182 YHP 184
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 245 VGTEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPF 284
V + + PE+ ++ + +D+++D WSLG +L M++ PF
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 10/165 (6%)
Query: 11 RSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKY 70
+ LD SC++I +G G G V S LK+ + + K L +
Sbjct: 38 KELDASCIKIERVIGAGEFGEVC---------SGRLKLPGKRDVAVAIKTLKVGYTEKQR 88
Query: 71 RRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTI 130
R E ++ +HP + L GV++ K V I++ L + ++ Q F+ +
Sbjct: 89 RDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ-FTVIQL 147
Query: 131 RFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+MG V+RDL NI++ N + DF LS
Sbjct: 148 VGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLS 192
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 13/107 (12%)
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL--CRPPDLVGE 306
+ APE I+ + A D WS G+V+ E++ YG P+ S ++ I R P +
Sbjct: 214 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPAPMDC 273
Query: 307 PTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGVNWELLLKISRPPN 353
P L L+ +K+ +R E+I G +L K+ R PN
Sbjct: 274 PAGLHQLMLDCWQKERAERPKFEQIVG----------ILDKMIRNPN 310
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 50/142 (35%), Gaps = 45/142 (31%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY---RIL---- 297
V T Y PE+I G D WS+G +L E G T F+ +E +IL
Sbjct: 232 VATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIP 291
Query: 298 ---------------------------------CRPPDLVG-----EPTPLRNLIRRLLE 319
C+P E L +L+RR+LE
Sbjct: 292 SHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLE 351
Query: 320 KDPTKRIGVEEIKGHEFFKGVN 341
DP +RI + E H FF G+
Sbjct: 352 FDPAQRITLAEALLHPFFAGLT 373
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 22/179 (12%)
Query: 6 NDRPIRSLDFSCLRIVSALGRGAKGVVF---LVKDVESSE-SFALKVIWRDLIEKKSKEL 61
N +R L + LR V LG GA G V+ + D E+ + A+KV+ + K +KE+
Sbjct: 7 NQALLRILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEI 66
Query: 62 TNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVL--STDKFVGYAIDYCPGRDLHSLRKQ 119
+ E V+ V P + RL G+ ST + V + Y G L +R+
Sbjct: 67 LD------------EAYVMAGVGSPYVSRLLGICLTSTVQLVTQLMPY--GCLLDHVREN 112
Query: 120 QSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
+ ++ S D + + ++ +V+RDL N++++ H+ + DF L+ L
Sbjct: 113 RG-RLGSQDLLNWCMQIAKGMSYL-EDVRLVHRDLAARNVLVKSPNHVKITDFGLARLL 169
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 50/142 (35%), Gaps = 45/142 (31%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY---RIL---- 297
V T Y PE+I G D WS+G +L E G T F+ +E +IL
Sbjct: 209 VATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIP 268
Query: 298 ---------------------------------CRPPDLVG-----EPTPLRNLIRRLLE 319
C+P E L +L+RR+LE
Sbjct: 269 SHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLE 328
Query: 320 KDPTKRIGVEEIKGHEFFKGVN 341
DP +RI + E H FF G+
Sbjct: 329 FDPAQRITLAEALLHPFFAGLT 350
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 10/104 (9%)
Query: 245 VGTEEYVAPEIIE-----GKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRK-ETFYRILC 298
G Y+APE I+ +D D WSLG+ L E+ G P++ E ++L
Sbjct: 185 AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ 244
Query: 299 RPPDLV----GEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
P L+ G ++ ++ L KD KR ++ H F K
Sbjct: 245 EEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIK 288
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 148 GIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
G+++RD+KP NI++ E G I L DF +S +L
Sbjct: 145 GVIHRDVKPSNILLDERGQIKLCDFGISGRL 175
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 50/142 (35%), Gaps = 45/142 (31%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY---RIL---- 297
V T Y PE+I G D WS+G +L E G T F+ +E +IL
Sbjct: 200 VATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIP 259
Query: 298 ---------------------------------CRPPDLVG-----EPTPLRNLIRRLLE 319
C+P E L +L+RR+LE
Sbjct: 260 SHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLE 319
Query: 320 KDPTKRIGVEEIKGHEFFKGVN 341
DP +RI + E H FF G+
Sbjct: 320 FDPAQRITLAEALLHPFFAGLT 341
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 17/165 (10%)
Query: 18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
L + LGRGA GVV ++ V S + A+K I + N + +R+ +
Sbjct: 53 LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV------------NSQEQKRLLMDL 100
Query: 78 RV-LRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSE--QMFSDDTIRFXX 134
+ +R V+ P G L + V ++ L KQ + Q +D +
Sbjct: 101 DISMRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIA 159
Query: 135 XXXXXXXXXXHN-MGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
H+ + +++RD+KP N++I G + + DF +S L
Sbjct: 160 VSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 204
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRILCRPPDLVG-- 305
+++APE I + F D WS G+ L E+ G++P+ G FY+++ ++
Sbjct: 212 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 271
Query: 306 -EPTPLRNLIRRLLEKDPTKRIGVEEI 331
P + ++++ + DP KR ++I
Sbjct: 272 HAPAEMYDIMKTCWDADPLKRPTFKQI 298
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRILCRPPDLVG-- 305
+++APE I + F D WS G+ L E+ G++P+ G FY+++ ++
Sbjct: 228 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 287
Query: 306 -EPTPLRNLIRRLLEKDPTKRIGVEEI 331
P + ++++ + DP KR ++I
Sbjct: 288 HAPAEMYDIMKTCWDADPLKRPTFKQI 314
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRILCRPPDLVG-- 305
+++APE I + F D WS G+ L E+ G++P+ G FY+++ ++
Sbjct: 230 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 289
Query: 306 -EPTPLRNLIRRLLEKDPTKRIGVEEI 331
P + ++++ + DP KR ++I
Sbjct: 290 HAPAEMYDIMKTCWDADPLKRPTFKQI 316
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 49/139 (35%), Gaps = 45/139 (32%)
Query: 244 FVGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFY---RILCRP 300
V Y APE+I G D WS+G +L E G T F KE RIL
Sbjct: 194 LVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPL 253
Query: 301 PDLVGEPT----------------------------PLR--------------NLIRRLL 318
P + + T PL+ +LI+++L
Sbjct: 254 PKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKML 313
Query: 319 EKDPTKRIGVEEIKGHEFF 337
E DP KRI + E H FF
Sbjct: 314 EYDPAKRITLREALKHPFF 332
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 83/254 (32%), Gaps = 92/254 (36%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRS 204
H+ + + DLKPENI+ + D++L+ L K + S K+
Sbjct: 154 HDNKLTHTDLKPENILFVNS------DYELTYNLEKKRDERSVKSTAV------------ 195
Query: 205 FLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDFA 264
+ G + D H V T Y APE+I G
Sbjct: 196 ---RVVDFGSATFDHEHHST-------------------IVSTRHYRAPEVILELGWSQP 233
Query: 265 VDWWSLGVVLHEMLYGATPF------------------------RGSSRKETFYRIL--- 297
D WS+G ++ E G T F R + +++ FYR
Sbjct: 234 CDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDW 293
Query: 298 -------------CRP-----PDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKG 339
C+P E L +LI +LE +P KR+ + E H FF
Sbjct: 294 DENTSAGRYVRENCKPLRRYLTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQHPFFAR 353
Query: 340 VNWELLLKISRPPN 353
+ E PPN
Sbjct: 354 LRAE-------PPN 360
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 56/146 (38%), Gaps = 30/146 (20%)
Query: 145 HNMGIVYRDLKPENIMIQEN-GHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRR 203
H GIV+RD+KP N + LVDF L+ K L +S ++ R
Sbjct: 134 HQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTH------DTKIELLKFVQSEAQQER 187
Query: 204 SFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEII-EGKGHD 262
+K CS +S V GT + APE++ +
Sbjct: 188 CSQNK-CSICLSRRQQVAPR---------------------AGTPGFRAPEVLTKCPNQT 225
Query: 263 FAVDWWSLGVVLHEMLYGATPFRGSS 288
A+D WS GV+ +L G PF +S
Sbjct: 226 TAIDMWSAGVIFLSLLSGRYPFYKAS 251
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRILCRPPDLVG-- 305
+++APE I + F D WS G+ L E+ G++P+ G FY+++ ++
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 294
Query: 306 -EPTPLRNLIRRLLEKDPTKRIGVEEI 331
P + ++++ + DP KR ++I
Sbjct: 295 HAPAEMYDIMKTCWDADPLKRPTFKQI 321
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRILCRPPDLVG-- 305
+++APE I + F D WS G+ L E+ G++P+ G FY+++ ++
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPE 294
Query: 306 -EPTPLRNLIRRLLEKDPTKRIGVEEI 331
P + ++++ + DP KR ++I
Sbjct: 295 HAPAEMYDIMKTCWDADPLKRPTFKQI 321
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 5/95 (5%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEP- 307
EY APE+ + A D WSLG +++ +L G PF + ++ I+ E
Sbjct: 168 EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAF 227
Query: 308 ----TPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
+ + RLL K+ R+ E H + K
Sbjct: 228 KEISIEAMDFVDRLLVKERKSRMTASEALQHPWLK 262
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 15/164 (9%)
Query: 18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQ 77
L + LGRGA GVV ++ V S + A+K I + ++ K L + + IS
Sbjct: 9 LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLD------IS--- 59
Query: 78 RVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSE--QMFSDDTIRFXXX 135
+R V+ P G L + V ++ L KQ + Q +D +
Sbjct: 60 --MRTVDCPFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAV 116
Query: 136 XXXXXXXXXHN-MGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
H+ + +++RD+KP N++I G + + DF +S L
Sbjct: 117 SIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 89/257 (34%), Gaps = 66/257 (25%)
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
VLR H + G ST + +C G L+ SE F +
Sbjct: 61 VLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYH-HLHASETKFEMKKLIDIARQTA 118
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSG 198
H I++RDLK NI + E+ + + DF L+T
Sbjct: 119 RGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLAT---------------------- 156
Query: 199 IKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEII-- 256
+K R S +F G+ ++APE+I
Sbjct: 157 VKSRWSGSHQF--------------------------------EQLSGSILWMAPEVIRM 184
Query: 257 -EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PPDL----VGEPT 308
+ + F D ++ G+VL+E++ G P+ + ++ ++ R PDL P
Sbjct: 185 QDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPK 244
Query: 309 PLRNLIRRLLEKDPTKR 325
++ L+ L+K +R
Sbjct: 245 RMKRLMAECLKKKRDER 261
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 74/178 (41%), Gaps = 20/178 (11%)
Query: 6 NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
N +R L + L+ V LG GA G V+ V E+ + V + ++ N
Sbjct: 28 NQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPV---------AIKILNET 78
Query: 66 NGDKYRRISF--EQRVLRNVEHPLLPRLRGVL--STDKFVGYAIDY-CPGRDLHSLRKQQ 120
G K + F E ++ +++HP L RL GV T + V + + C +H +
Sbjct: 79 TGPK-ANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNI 137
Query: 121 SEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
Q+ + ++ +V+RDL N++++ H+ + DF L+ L
Sbjct: 138 GSQLLLNWCVQIAKGMMYLEERR-----LVHRDLAARNVLVKSPNHVKITDFGLARLL 190
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 119 QQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTK 177
+Q Q+ +D IRF H+ GI++RD+KP N+MI + + L+D+ L+
Sbjct: 128 KQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEF 187
Query: 178 LSP 180
P
Sbjct: 188 YHP 190
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 245 VGTEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATP-FRGSSRKETFYRI 296
V + + PE+ ++ + +D+++D WSLG +L M++ P F G + RI
Sbjct: 198 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRI 251
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 119 QQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTK 177
+Q Q+ +D IRF H+ GI++RD+KP N+MI + + L+D+ L+
Sbjct: 123 KQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEF 182
Query: 178 LSP 180
P
Sbjct: 183 YHP 185
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 245 VGTEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATP-FRGSSRKETFYRI 296
V + + PE+ ++ + +D+++D WSLG +L M++ P F G + RI
Sbjct: 193 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRI 246
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 47/110 (42%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E V++ ++HP L +L GV + + +Y P +L ++ + + + + +
Sbjct: 78 EAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMAT 137
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
++RDL N ++ EN + + DF LS ++ T A
Sbjct: 138 QISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTA 187
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E +L++++H + L ++ T+K + +Y +DL + + ++
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYL-DDCGNIINMHNVKLFLF 107
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H +++RDLKP+N++I E G + L DF L+
Sbjct: 108 QLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLA 147
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 245 VGTEEYVAPEIIEGKG-HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETF---YRILCRP 300
V T Y P+I+ G + +D W +G + +EM G F GS+ +E +RIL P
Sbjct: 161 VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTP 220
Query: 301 PD 302
+
Sbjct: 221 TE 222
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATP----FRG 286
GTE ++APE++ GK D VD WS ++ ML G P FRG
Sbjct: 218 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG 262
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATP----FRG 286
GTE ++APE++ GK D VD WS ++ ML G P FRG
Sbjct: 232 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG 276
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATP----FRG 286
GTE ++APE++ GK D VD WS ++ ML G P FRG
Sbjct: 234 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG 278
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 91/244 (37%), Gaps = 66/244 (27%)
Query: 68 DKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSE-QMF 125
++++ E VLR H + G ++ D + +C G L+ L Q+++ QMF
Sbjct: 74 EQFQAFRNEVAVLRKTRHVNILLFMGYMTKDN-LAIVTQWCEGSSLYKHLHVQETKFQMF 132
Query: 126 SDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
I H I++RD+K NI + E + + DF L+T
Sbjct: 133 QLIDI---ARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLAT--------- 180
Query: 186 SPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFV 245
+K R S +E P
Sbjct: 181 -------------VKSR-------WSGSQQVEQP-------------------------T 195
Query: 246 GTEEYVAPEIIEGKGHD---FAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR--- 299
G+ ++APE+I + ++ F D +S G+VL+E++ G P+ + ++ ++ R
Sbjct: 196 GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYA 255
Query: 300 PPDL 303
PDL
Sbjct: 256 SPDL 259
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 101 VGYAI-DYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENI 159
VGY + +Y G+ SL++ + +++ + I + H++G+VY DLKPENI
Sbjct: 158 VGYIVMEYVGGQ---SLKRSKGQKLPVAEAIAYLLEILPALSYL-HSIGLVYNDLKPENI 213
Query: 160 MIQENGHIMLVDFDLSTKLS 179
M+ E + L+D ++++
Sbjct: 214 MLTEE-QLKLIDLGAVSRIN 232
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 74/178 (41%), Gaps = 20/178 (11%)
Query: 6 NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
N +R L + L+ V LG GA G V+ V E+ + V + ++ N
Sbjct: 5 NQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPV---------AIKILNET 55
Query: 66 NGDKYRRISF--EQRVLRNVEHPLLPRLRGVL--STDKFVGYAIDY-CPGRDLHSLRKQQ 120
G K + F E ++ +++HP L RL GV T + V + + C +H +
Sbjct: 56 TGPK-ANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNI 114
Query: 121 SEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
Q+ + ++ +V+RDL N++++ H+ + DF L+ L
Sbjct: 115 GSQLLLNWCVQIAKGMMYLEERR-----LVHRDLAARNVLVKSPNHVKITDFGLARLL 167
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 47/110 (42%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E V++ ++HP L +L GV + + I++ +L ++ + Q S + +
Sbjct: 57 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 116
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
++RDL N ++ EN + + DF LS ++ T A
Sbjct: 117 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA 166
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEM-LYGATPFRGSSRKETF------YRILCRPP 301
++ APE + D W+ GV+L E+ YG +P+ G + + YR + RP
Sbjct: 175 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYR-MERPE 233
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
G P + L+R + +P+ R EI H+ F+
Sbjct: 234 ---GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFE 265
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 47/110 (42%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E V++ ++HP L +L GV + + I++ +L ++ + Q S + +
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
++RDL N ++ EN + + DF LS ++ T A
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEM-LYGATPFRGSSRKETF------YRILCRPP 301
++ APE + D W+ GV+L E+ YG +P+ G + + YR + RP
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MERPE 235
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
G P + L+R + +P+ R EI H+ F+
Sbjct: 236 ---GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFE 267
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 47/110 (42%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E V++ ++HP L +L GV + + I++ +L ++ + Q S + +
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
++RDL N ++ EN + + DF LS ++ T A
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEM-LYGATPFRGSSRKETF------YRILCRPP 301
++ APE + D W+ GV+L E+ YG +P+ G + + YR + RP
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MERPE 235
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
G P + L+R + +P+ R EI H+ F+
Sbjct: 236 ---GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFE 267
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
Y APE+I G + +D WSLG +L E+L G G + ++ +L+G P+
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMI----ELLGMPS 319
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 112 DLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGH--IML 169
+L+ L K+ Q FS +R H I++ DLKPENI++++ G I +
Sbjct: 184 NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKV 243
Query: 170 VDFDLST 176
+DF S
Sbjct: 244 IDFGSSC 250
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL--CRPPDLVGE 306
+ APE I + A D WS GVV+ E+L YG P+ + ++ + R P +G
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGC 279
Query: 307 PTPLRNLIRRLLEKDPTKR 325
P L L+ KD +R
Sbjct: 280 PHALHQLMLDCWHKDRAQR 298
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E ++ +HP + RL GV++ + +Y L + + Q F+ +
Sbjct: 100 EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ-FTIMQLVGMLR 158
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
++G V+RDL N+++ N + DF LS L
Sbjct: 159 GVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVGEPT 308
Y APE+I G + +D WSLG +L E+L G G + ++ +L+G P+
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMI----ELLGMPS 319
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 112 DLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGH--IML 169
+L+ L K+ Q FS +R H I++ DLKPENI++++ G I +
Sbjct: 184 NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKV 243
Query: 170 VDFDLST 176
+DF S
Sbjct: 244 IDFGSSC 250
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 11/92 (11%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF------YRILCRPP 301
++ APE I D WS G++L E++ YG P+ G S E YR + RP
Sbjct: 334 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR-MPRPE 392
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKG 333
+ P L N++ R + P +R E I+
Sbjct: 393 NC---PEELYNIMMRCWKNRPEERPTFEYIQS 421
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 245 VGTEEYVAPEIIEG-KGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDL 303
V T Y AP+++ G + + ++D WS G +L EM+ G F G++ +E I D+
Sbjct: 169 VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIF----DI 224
Query: 304 VGEP 307
+G P
Sbjct: 225 MGTP 228
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H I++RDLKP+N++I + G + L DF L+
Sbjct: 125 HENKILHRDLKPQNLLINKRGQLKLGDFGLA 155
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETFYRI-----LCRPPDL 303
+ APE I + A D WS G+V+ E M +G P+ S ++ I L PPD
Sbjct: 189 WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPDC 248
Query: 304 VGEPTPLRNLIRRLLEKDPTKR 325
PT L L+ +KD R
Sbjct: 249 ---PTSLHQLMLDCWQKDRNAR 267
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 63/168 (37%), Gaps = 16/168 (9%)
Query: 11 RSLDFSCLRIVSALGRGAKGVVF---LVKDVESSESFALKVIWRDLIEKKSKELTNNDNG 67
+ +D S ++I +G G G V L + A+K + E++ +E +
Sbjct: 11 KEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLS---- 66
Query: 68 DKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD 127
E ++ EHP + RL GV++ V ++ L S + Q F+
Sbjct: 67 --------EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-FTV 117
Query: 128 DTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+ M V+RDL NI++ N + DF LS
Sbjct: 118 IQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLS 165
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 11/91 (12%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF------YRILCRPP 301
++ APE I D WS G++L E++ YG P+ G S E YR + RP
Sbjct: 350 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR-MPRPE 408
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIK 332
+ P L N++ R + P +R E I+
Sbjct: 409 NC---PEELYNIMMRCWKNRPEERPTFEYIQ 436
>pdb|3Q5Z|A Chain A, Crystal Structure Of Virulent Allele Rop5b Pseudokinase
Domain
pdb|3Q60|A Chain A, Crystal Structure Of Virulent Allele Rop5b Pseudokinase
Domain Bound To Atp
Length = 371
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 79/210 (37%), Gaps = 34/210 (16%)
Query: 18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSK-ELTNNDNGDKYRRISFE 76
L++V L G + VVFLV+DVE E FALKV +S+ E + R +
Sbjct: 64 LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGES 123
Query: 77 QRVLRNVEHPLLPR-LRGVLSTDKFVGYAIDYCPGRD---------LHSLRKQQSEQMFS 126
R+ LLP V S F PG+D L E +FS
Sbjct: 124 PEEARDRRRLLLPSDAVAVQSQPPFA----QLSPGQDDYAVANYLLLMPAASVDLELLFS 179
Query: 127 ----------DDTIRFXXXXXXXXXXXXHNM---GIVYRDLKPENIMIQENGHIMLVDFD 173
D+ I N+ G+V+ P+N+ I +G +ML D
Sbjct: 180 TLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVS 239
Query: 174 LSTKLSPKTPQAS------PKTVLAANTRS 197
K+ + P +S P+ L A+T +
Sbjct: 240 ALWKVGTRGPASSVPVTYAPREFLNASTAT 269
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEMLYG 280
Y APE+I G + +D WSLG +L E+L G
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 112 DLHSLRKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGH--IML 169
+L+ L K+ Q FS +R H I++ DLKPENI++++ G I +
Sbjct: 184 NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKV 243
Query: 170 VDFDLST 176
+DF S
Sbjct: 244 IDFGSSC 250
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 11/92 (11%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF------YRILCRPP 301
++ APE I D WS G++L E++ YG P+ G S E YR + RP
Sbjct: 177 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR-MPRPE 235
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKG 333
+ P L N++ R + P +R E I+
Sbjct: 236 NC---PEELYNIMMRCWKNRPEERPTFEYIQS 264
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 2/110 (1%)
Query: 65 DNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQM 124
DN D+ + E R H + G + + C GR L+S+ + ++ +
Sbjct: 68 DNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRD-AKIV 126
Query: 125 FSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDL 174
+ R H GI+++DLK +N+ +NG +++ DF L
Sbjct: 127 LDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY-DNGKVVITDFGL 175
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETFYRI-----LCRPPDL 303
+ APE I + A D WS G+V+ E M +G P+ S ++ I L PPD
Sbjct: 187 WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPDC 246
Query: 304 VGEPTPLRNLIRRLLEKDPTKR 325
PT L L+ +KD R
Sbjct: 247 ---PTSLHQLMLDCWQKDRNAR 265
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 63/168 (37%), Gaps = 16/168 (9%)
Query: 11 RSLDFSCLRIVSALGRGAKGVVF---LVKDVESSESFALKVIWRDLIEKKSKELTNNDNG 67
+ +D S ++I +G G G V L + A+K + E++ +E +
Sbjct: 9 KEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLS---- 64
Query: 68 DKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSD 127
E ++ EHP + RL GV++ V ++ L S + Q F+
Sbjct: 65 --------EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-FTV 115
Query: 128 DTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+ M V+RDL NI++ N + DF LS
Sbjct: 116 IQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLS 163
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 47/110 (42%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E V++ ++HP L +L GV + + I++ +L ++ + Q + + +
Sbjct: 60 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 119
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
++RDL N ++ EN + + DF LS ++ T A
Sbjct: 120 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA 169
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEM-LYGATPFRGSSRKETF------YRILCRPP 301
++ APE + D W+ GV+L E+ YG +P+ G + + YR + RP
Sbjct: 178 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MERPE 236
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
G P + L+R + +P+ R EI H+ F+
Sbjct: 237 ---GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFE 268
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 73/178 (41%), Gaps = 10/178 (5%)
Query: 1 MNDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKE 60
M + N +R L + + + LG GA G V+ + E + V ++L E S +
Sbjct: 3 MGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK 62
Query: 61 LTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQ 120
+ I E V+ +V++P + RL G+ T V + P L ++
Sbjct: 63 AN--------KEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREH 113
Query: 121 SEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
+ + S + + + +V+RDL N++++ H+ + DF L+ L
Sbjct: 114 KDNIGSQYLLNWCVQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 46/110 (41%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E V++ ++HP L +L GV + + ++ +L ++ + Q S + +
Sbjct: 57 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 116
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
++RDL N ++ EN + + DF LS ++ T A
Sbjct: 117 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA 166
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEM-LYGATPFRGSSRKETF------YRILCRPP 301
++ APE + D W+ GV+L E+ YG +P+ G + + YR + RP
Sbjct: 175 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYR-MERPE 233
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
G P + L+R + +P+ R EI H+ F+
Sbjct: 234 ---GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFE 265
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 72/209 (34%), Gaps = 56/209 (26%)
Query: 125 FSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQ 184
++D I + H G +RDLKP NI++ + G +L+D
Sbjct: 131 LTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMD------------- 177
Query: 185 ASPKTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXF 244
L + ++ I S ++L+D
Sbjct: 178 ------LGSMNQACIHVEGS------RQALTLQDWAAQRC-------------------- 205
Query: 245 VGTEEYVAPEIIEGKGH---DFAVDWWSLGVVLHEMLYGATPF-----RGSSRKETFYRI 296
T Y APE+ + H D D WSLG VL+ M++G P+ +G S
Sbjct: 206 --TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQ 263
Query: 297 LCRPPDLVGEPTPLRNLIRRLLEKDPTKR 325
L P + L L+ ++ DP +R
Sbjct: 264 LSIPQS-PRHSSALWQLLNSMMTVDPHQR 291
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 25/116 (21%)
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX-------- 135
+HP + R +TD+F+ A++ C +L L + ++ SD+ ++
Sbjct: 85 DHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKN---VSDENLKLQKEYNPISLLR 140
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQ-------------ENGHIMLVDFDLSTKL 178
H++ I++RDLKP+NI++ EN I++ DF L KL
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRG---SSRKETFYRILCRPP 301
VGT Y APE + D ++L VL+E L G+ P++G S + + RP
Sbjct: 196 VGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIPRPS 255
Query: 302 DL-VGEPTPLRNLIRRLLEKDPTKR 325
+ G P +I R K+P R
Sbjct: 256 TVRPGIPVAFDAVIARGXAKNPEDR 280
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 150 VYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
+RD+KPENI++ + LVDF +++ +
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASATT 185
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 25/116 (21%)
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX-------- 135
+HP + R +TD+F+ A++ C +L L + ++ SD+ ++
Sbjct: 85 DHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKN---VSDENLKLQKEYNPISLLR 140
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQ-------------ENGHIMLVDFDLSTKL 178
H++ I++RDLKP+NI++ EN I++ DF L KL
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 47/110 (42%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E V++ ++HP L +L GV + + I++ +L ++ + Q + + +
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
++RDL N ++ EN + + DF LS ++ T A
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 173
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 13/99 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEM-LYGATPFRGSSRKETF------YRILCRPP 301
++ APE + D W+ GV+L E+ YG +P+ G + + YR + RP
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MERPE 240
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV 340
G P + L+R + +P+ R EI H+ F+ +
Sbjct: 241 ---GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFETM 274
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 25/116 (21%)
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX-------- 135
+HP + R +TD+F+ A++ C +L L + ++ SD+ ++
Sbjct: 67 DHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKN---VSDENLKLQKEYNPISLLR 122
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQ-------------ENGHIMLVDFDLSTKL 178
H++ I++RDLKP+NI++ EN I++ DF L KL
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 178
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 72/178 (40%), Gaps = 10/178 (5%)
Query: 1 MNDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKE 60
M + N +R L + + + LG GA G V+ + E + V ++L E S +
Sbjct: 3 MGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK 62
Query: 61 LTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQ 120
+ I E V+ +V++P + RL G+ T V P L ++
Sbjct: 63 AN--------KEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREH 113
Query: 121 SEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
+ + S + + + +V+RDL N++++ H+ + DF L+ L
Sbjct: 114 KDNIGSQYLLNWCVQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 72/178 (40%), Gaps = 10/178 (5%)
Query: 1 MNDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKE 60
M + N +R L + + + LG GA G V+ + E + V ++L E S +
Sbjct: 3 MGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK 62
Query: 61 LTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQ 120
+ I E V+ +V++P + RL G+ T V P L ++
Sbjct: 63 AN--------KEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREH 113
Query: 121 SEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
+ + S + + + +V+RDL N++++ H+ + DF L+ L
Sbjct: 114 KDNIGSQYLLNWCVQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL-----CRPPD 302
+++APE I + + D WS GV+L E+ GA+P+ G E F R L R PD
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 274
Query: 303 LVGEPTP-LRNLIRRLLEKDPTKRIGVEEIKGH 334
TP + + +P++R E+ H
Sbjct: 275 YT---TPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 46/110 (41%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E V++ ++HP L +L GV + + ++ +L ++ + Q S + +
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
++RDL N ++ EN + + DF LS ++ T A
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEM-LYGATPFRGSSRKETF------YRILCRPP 301
++ APE + D W+ GV+L E+ YG +P+ G + + YR + RP
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MERPE 235
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
G P + L+R + +P+ R EI H+ F+
Sbjct: 236 ---GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFE 267
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 46/110 (41%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E V++ ++HP L +L GV + + ++ +L ++ + Q S + +
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 118
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
++RDL N ++ EN + + DF LS ++ T A
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEM-LYGATPFRGSSRKETF------YRILCRPP 301
++ APE + D W+ GV+L E+ YG +P+ G + + YR + RP
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MERPE 235
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
G P + L+R + +P+ R EI H+ F+
Sbjct: 236 ---GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFE 267
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL-----CRPPD 302
+++APE I + + D WS GV+L E+ GA+P+ G E F R L R PD
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAPD 270
Query: 303 LVGEPTP-LRNLIRRLLEKDPTKRIGVEEIKGH 334
TP + + +P++R E+ H
Sbjct: 271 YT---TPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL-----CRPPD 302
+++APE I + + D WS GV+L E+ GA+P+ G E F R L R PD
Sbjct: 265 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 324
Query: 303 LVGEPTP-LRNLIRRLLEKDPTKRIGVEEIKGH 334
TP + + +P++R E+ H
Sbjct: 325 YT---TPEMYQTMLDCWHGEPSQRPTFSELVEH 354
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 46/110 (41%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E V++ ++HP L +L GV + + ++ +L ++ + Q S + +
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 123
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
++RDL N ++ EN + + DF LS ++ T A
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 173
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEM-LYGATPFRGSSRKETF------YRILCRPP 301
++ APE + D W+ GV+L E+ YG +P+ G + + YR + RP
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MERPE 240
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
G P + L+R + +P+ R EI H+ F+
Sbjct: 241 ---GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFE 272
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 148 GIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
I +RDLK +NI++++NG + D L+ K T + + NTR G K+
Sbjct: 162 AIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVD----IPPNTRVGTKR 211
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL-----CRPPD 302
+++APE I + + D WS GV+L E+ GA+P+ G E F R L R PD
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 265
Query: 303 LVGEPTP-LRNLIRRLLEKDPTKRIGVEEIKGH 334
TP + + +P++R E+ H
Sbjct: 266 YT---TPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL-----CRPPD 302
+++APE I + + D WS GV+L E+ GA+P+ G E F R L R PD
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 274
Query: 303 LVGEPTP-LRNLIRRLLEKDPTKRIGVEEIKGH 334
TP + + +P++R E+ H
Sbjct: 275 YT---TPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 72/178 (40%), Gaps = 10/178 (5%)
Query: 1 MNDVVNDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKE 60
M + N +R L + + + LG GA G V+ + E + V ++L E S +
Sbjct: 3 MGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK 62
Query: 61 LTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQ 120
+ I E V+ +V++P + RL G+ T V P L ++
Sbjct: 63 AN--------KEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREH 113
Query: 121 SEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
+ + S + + + +V+RDL N++++ H+ + DF L+ L
Sbjct: 114 KDNIGSQYLLNWCVQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 65/167 (38%), Gaps = 21/167 (12%)
Query: 18 LRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKEL-----TNNDNGDKYRR 72
L + LGRGA GVV + V S + A+K I + ++ K L + D
Sbjct: 36 LEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFT 95
Query: 73 ISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRF 132
++F + R + + L S DKF ID Q +D +
Sbjct: 96 VTFYGALFREGDVWICXELXDT-SLDKFYKQVID--------------KGQTIPEDILGK 140
Query: 133 XXXXXXXXXXXXHN-MGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
H+ + +++RD+KP N++I G + DF +S L
Sbjct: 141 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYL 187
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL-----CRPPD 302
+++APE I + + D WS GV+L E+ GA+P+ G E F R L R PD
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 274
Query: 303 LVGEPTP-LRNLIRRLLEKDPTKRIGVEEIKGH 334
TP + + +P++R E+ H
Sbjct: 275 YT---TPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL-----CRPPD 302
+++APE I + + D WS GV+L E+ GA+P+ G E F R L R PD
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 274
Query: 303 LVGEPTP-LRNLIRRLLEKDPTKRIGVEEIKGH 334
TP + + +P++R E+ H
Sbjct: 275 YT---TPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL-----CRPPD 302
+++APE I + + D WS GV+L E+ GA+P+ G E F R L R PD
Sbjct: 267 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 326
Query: 303 LVGEPTP-LRNLIRRLLEKDPTKRIGVEEIKGH 334
TP + + +P++R E+ H
Sbjct: 327 YT---TPEMYQTMLDCWHGEPSQRPTFSELVEH 356
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL-----CRPPD 302
+++APE I + + D WS GV+L E+ GA+P+ G E F R L R PD
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 274
Query: 303 LVGEPTP-LRNLIRRLLEKDPTKRIGVEEIKGH 334
TP + + +P++R E+ H
Sbjct: 275 YT---TPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL-----CRPPD 302
+++APE I + + D WS GV+L E+ GA+P+ G E F R L R PD
Sbjct: 258 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 317
Query: 303 LVGEPTP-LRNLIRRLLEKDPTKRIGVEEIKGH 334
TP + + +P++R E+ H
Sbjct: 318 YT---TPEMYQTMLDCWHGEPSQRPTFSELVEH 347
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL-----CRPPD 302
+++APE I + + D WS GV+L E+ GA+P+ G E F R L R PD
Sbjct: 217 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 276
Query: 303 LVGEPTP-LRNLIRRLLEKDPTKRIGVEEIKGH 334
TP + + +P++R E+ H
Sbjct: 277 YT---TPEMYQTMLDCWHGEPSQRPTFSELVEH 306
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL-----CRPPD 302
+++APE I + + D WS GV+L E+ GA+P+ G E F R L R PD
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 265
Query: 303 LVGEPTP-LRNLIRRLLEKDPTKRIGVEEIKGH 334
TP + + +P++R E+ H
Sbjct: 266 YT---TPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL-----CRPPD 302
+++APE I + + D WS GV+L E+ GA+P+ G E F R L R PD
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 265
Query: 303 LVGEPTP-LRNLIRRLLEKDPTKRIGVEEIKGH 334
TP + + +P++R E+ H
Sbjct: 266 YT---TPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL-----CRPPD 302
+++APE I + + D WS GV+L E+ GA+P+ G E F R L R PD
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 265
Query: 303 LVGEPTP-LRNLIRRLLEKDPTKRIGVEEIKGH 334
TP + + +P++R E+ H
Sbjct: 266 YT---TPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL-----CRPPD 302
+++APE I + + D WS GV+L E+ GA+P+ G E F R L R PD
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 270
Query: 303 LVGEPTP-LRNLIRRLLEKDPTKRIGVEEIKGH 334
TP + + +P++R E+ H
Sbjct: 271 YT---TPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL-----CRPPD 302
+++APE I + + D WS GV+L E+ GA+P+ G E F R L R PD
Sbjct: 252 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 311
Query: 303 LVGEPTP-LRNLIRRLLEKDPTKRIGVEEIKGH 334
TP + + +P++R E+ H
Sbjct: 312 YT---TPEMYQTMLDCWHGEPSQRPTFSELVEH 341
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 59/165 (35%), Gaps = 26/165 (15%)
Query: 21 VSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVL 80
+S LG G+ G VF V+ E +A+K S D K + ++V
Sbjct: 62 LSRLGHGSYGEVFKVRSKEDGRLYAVK-------RSMSPFRGPKDRARKLAEVGSHEKV- 113
Query: 81 RNVEHPLLPRLRGVLSTDKFVGYAIDYC-PGRDLH------SLRKQQSEQMFSDDTIRFX 133
+HP RL + + C P H SL + Q D +
Sbjct: 114 --GQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALA 171
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
H+ G+V+ D+KP NI + G L DF L +L
Sbjct: 172 HL---------HSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVEL 207
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPPDLVG 305
G Y+APE+++G + A D +SLG+ + E+ G + + P G
Sbjct: 218 GDPRYMAPELLQGS-YGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAG 276
Query: 306 EPTPLRNLIRRLLEKDPTKRIGVEEI 331
+ LR+++ +LE DP R E +
Sbjct: 277 LSSELRSVLVMMLEPDPKLRATAEAL 302
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRIL-----CRPPD 302
+++APE I + + D WS GV+L E+ GA+P+ G E F R L R PD
Sbjct: 260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 319
Query: 303 LVGEPTP-LRNLIRRLLEKDPTKRIGVEEIKGH 334
TP + + +P++R E+ H
Sbjct: 320 YT---TPEMYQTMLDCWHGEPSQRPTFSELVEH 349
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 46/110 (41%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E V++ ++HP L +L GV + + ++ +L ++ + Q S + +
Sbjct: 57 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMAT 116
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
++RDL N ++ EN + + DF LS ++ T A
Sbjct: 117 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTA 166
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEM-LYGATPFRGSSRKETF------YRILCRPP 301
++ APE + D W+ GV+L E+ YG +P+ G + + YR + RP
Sbjct: 175 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYR-MERPE 233
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
G P + L+R + +P+ R EI H+ F+
Sbjct: 234 ---GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFE 265
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 35.0 bits (79), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 71/173 (41%), Gaps = 10/173 (5%)
Query: 6 NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
N +R L + + + LG GA G V+ + E + V ++L E S +
Sbjct: 6 NQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--- 62
Query: 66 NGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMF 125
+ I E V+ +V++P + RL G+ T V + P L ++ + +
Sbjct: 63 -----KEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGXLLDYVREHKDNIG 116
Query: 126 SDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
S + + + +V+RDL N++++ H+ + DF L+ L
Sbjct: 117 SQYLLNWCVQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 168
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 35.0 bits (79), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 94/261 (36%), Gaps = 61/261 (23%)
Query: 71 RRISF--EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSD 127
+R+ F E ++ H + RL GV+S K + +Y L LR++ E FS
Sbjct: 89 QRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGE--FSV 146
Query: 128 DTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASP 187
+ NM V+RDL NI++ N + DF LS L P+A+
Sbjct: 147 LQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE-DDPEAT- 204
Query: 188 KTVLAANTRSGIKKRRSFLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGT 247
+ +SG + P+
Sbjct: 205 ---------------------YTTSGGKI--PIR-------------------------- 215
Query: 248 EEYVAPEIIEGKGHDFAVDWWSLGVVLHE-MLYGATPFRGSSRKETFYRI--LCRPPDLV 304
+ APE I + A D WS G+V+ E M YG P+ S E I R P +
Sbjct: 216 --WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPM 273
Query: 305 GEPTPLRNLIRRLLEKDPTKR 325
P+ + L+ + +++ +R
Sbjct: 274 DCPSAIYQLMMQCWQQERARR 294
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 34.7 bits (78), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 250 YVAPEIIEGKGHDF---AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDL 303
+VAPE ++ K D + D WS V+L E++ PF S E ++ RP
Sbjct: 174 WVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIP 233
Query: 304 VGEPTPLRNLIRRLLEKDPTKR 325
G + L++ + +DP KR
Sbjct: 234 PGISPHVSKLMKICMNEDPAKR 255
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 34.7 bits (78), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 2/101 (1%)
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
VLR H + G ST + +C G L+ SE F +
Sbjct: 73 VLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYH-HLHASETKFEMKKLIDIARQTA 130
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
H I++RDLK NI + E+ + + DF L+T+ S
Sbjct: 131 RGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 246 GTEEYVAPEII---EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR--- 299
G+ ++APE+I + + F D ++ G+VL+E++ G P+ + ++ ++ R
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
Query: 300 PPDL----VGEPTPLRNLIRRLLEKDPTKR 325
PDL P ++ L+ L+K +R
Sbjct: 244 SPDLSKVRSNCPKRMKRLMAECLKKKRDER 273
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 34.7 bits (78), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILC---RPP 301
+GT E+ APE E K +D +VD ++ G E P+ YR + +P
Sbjct: 191 IGTPEFXAPEXYEEK-YDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPA 249
Query: 302 DLVGEPTP-LRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
P ++ +I + ++ +R ++++ H FF+
Sbjct: 250 SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 287
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 34.7 bits (78), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 71/173 (41%), Gaps = 10/173 (5%)
Query: 6 NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
N +R L + + + LG GA G V+ + E + V ++L E S +
Sbjct: 9 NQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--- 65
Query: 66 NGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMF 125
+ I E V+ +V++P + RL G+ T V + P L ++ + +
Sbjct: 66 -----KEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIG 119
Query: 126 SDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
S + + + +V+RDL N++++ H+ + DF L+ L
Sbjct: 120 SQYLLNWCVQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 171
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 2/101 (1%)
Query: 79 VLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXXXXX 138
VLR H + G ST + +C G L+ SE F +
Sbjct: 73 VLRKTRHVNILLFMG-YSTAPQLAIVTQWCEGSSLYH-HLHASETKFEMKKLIDIARQTA 130
Query: 139 XXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
H I++RDLK NI + E+ + + DF L+T+ S
Sbjct: 131 RGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 246 GTEEYVAPEII---EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR--- 299
G+ ++APE+I + + F D ++ G+VL+E++ G P+ + ++ ++ R
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
Query: 300 PPDL----VGEPTPLRNLIRRLLEKDPTKR 325
PDL P ++ L+ L+K +R
Sbjct: 244 SPDLSKVRSNCPKRMKRLMAECLKKKRDER 273
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 71/173 (41%), Gaps = 10/173 (5%)
Query: 6 NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
N +R L + + + LG GA G V+ + E + V ++L E S +
Sbjct: 5 NQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--- 61
Query: 66 NGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMF 125
+ I E V+ +V++P + RL G+ T V + P L ++ + +
Sbjct: 62 -----KEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIG 115
Query: 126 SDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
S + + + +V+RDL N++++ H+ + DF L+ L
Sbjct: 116 SQYLLNWCVQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 71/173 (41%), Gaps = 10/173 (5%)
Query: 6 NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
N +R L + + + LG GA G V+ + E + V ++L E S +
Sbjct: 7 NQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--- 63
Query: 66 NGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMF 125
+ I E V+ +V++P + RL G+ T V + P L ++ + +
Sbjct: 64 -----KEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIG 117
Query: 126 SDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
S + + + +V+RDL N++++ H+ + DF L+ L
Sbjct: 118 SQYLLNWCVQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 169
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 71/173 (41%), Gaps = 10/173 (5%)
Query: 6 NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
N +R L + + + LG GA G V+ + E + V ++L E S +
Sbjct: 6 NQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--- 62
Query: 66 NGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMF 125
+ I E V+ +V++P + RL G+ T V + P L ++ + +
Sbjct: 63 -----KEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIG 116
Query: 126 SDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
S + + + +V+RDL N++++ H+ + DF L+ L
Sbjct: 117 SQYLLNWCVQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 168
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI------LCRPPD 302
+ APE ++ + A D W GV L EM YG P+ G + + ++I L RP D
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 243
Query: 303 LVGEPTPLRNLIRRLLEKDPTKR 325
P + N++ + P R
Sbjct: 244 C---PQDIYNVMVQCWAHKPEDR 263
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 70/173 (40%), Gaps = 10/173 (5%)
Query: 6 NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
N +R L + + + LG GA G V+ + E + V ++L E S +
Sbjct: 5 NQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--- 61
Query: 66 NGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMF 125
+ I E V+ +V++P + RL G+ T V P L ++ + +
Sbjct: 62 -----KEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGXLLDYVREHKDNIG 115
Query: 126 SDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
S + + + +V+RDL N++++ H+ + DF L+ L
Sbjct: 116 SQYLLNWCVQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 22/31 (70%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
H+ GI++RDLKP N ++ ++ + + DF L+
Sbjct: 173 HSAGILHRDLKPANCLVNQDCSVKVCDFGLA 203
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 312 NLIRRLLEKDPTKRIGVEEIKGHEFFKGV 340
+L++R+L +P KRI + E H FFK V
Sbjct: 375 HLLKRMLVFNPNKRITINECLAHPFFKEV 403
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGH-----IMLVDFDLST 176
++ F+ T+ H+ ++YRD+KPEN +I G+ I ++DF L+
Sbjct: 91 DRTFTLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAK 150
Query: 177 K-LSPKTPQASP 187
+ + P+T + P
Sbjct: 151 EYIDPETKKHIP 162
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 46/110 (41%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E V++ ++HP L +L GV + + ++ +L ++ + Q + + +
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
++RDL N ++ EN + + DF LS ++ T A
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA 173
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 13/99 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEM-LYGATPFRGSSRKETF------YRILCRPP 301
++ APE + D W+ GV+L E+ YG +P+ G + + YR + RP
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MERPE 240
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV 340
G P + L+R + +P+ R EI H+ F+ +
Sbjct: 241 ---GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFETM 274
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 148 GIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
I +RDLK +NI++++NG + D L+ S T Q + N R G K+
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLD----VGNNPRVGTKR 182
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 148 GIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
I +RDLK +NI++++NG + D L+ S T Q + N R G K+
Sbjct: 162 AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLD----VGNNPRVGTKR 211
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 148 GIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
I +RDLK +NI++++NG + D L+ S T Q + N R G K+
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLD----VGNNPRVGTKR 182
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI------LCRPPD 302
+ APE ++ + A D W GV L EM YG P+ G + + ++I L RP D
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 243
Query: 303 LVGEPTPLRNLIRRLLEKDPTKR 325
P + N++ + P R
Sbjct: 244 C---PQDIYNVMVQCWAHKPEDR 263
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 125 FSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTKLSP 180
+D IR+ H+ GI++RD+KP N+MI E + L+D+ L+ P
Sbjct: 124 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 180
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 245 VGTEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPF 284
V + + PE+ ++ + +D+++D WSLG + M++ PF
Sbjct: 188 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 228
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 125 FSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTKLSP 180
+D IR+ H+ GI++RD+KP N+MI E + L+D+ L+ P
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 178
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 245 VGTEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPF 284
V + + PE+ ++ + +D+++D WSLG + M++ PF
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 46/110 (41%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E V++ ++HP L +L GV + + ++ +L ++ + Q + + +
Sbjct: 61 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
++RDL N ++ EN + + DF LS ++ T A
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 170
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 13/99 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEM-LYGATPFRGSSRKETF------YRILCRPP 301
++ APE + D W+ GV+L E+ YG +P+ G + + YR + RP
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MERPE 237
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV 340
G P + L+R + +P+ R EI H+ F+ +
Sbjct: 238 ---GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFETM 271
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 70/173 (40%), Gaps = 10/173 (5%)
Query: 6 NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
N +R L + + + LG GA G V+ + E + V ++L E S +
Sbjct: 30 NQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--- 86
Query: 66 NGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMF 125
+ I E V+ +V++P + RL G+ T V P L ++ + +
Sbjct: 87 -----KEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIG 140
Query: 126 SDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
S + + + +V+RDL N++++ H+ + DF L+ L
Sbjct: 141 SQYLLNWCVQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 192
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEM-LYGATPFRGSSRKETF------YRILCRPP 301
++ APE + D W+ GV+L E+ YG +P+ G + + YR + RP
Sbjct: 381 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MERPE 439
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
G P + L+R + +P+ R EI H+ F+
Sbjct: 440 ---GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFE 471
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 71/191 (37%), Gaps = 64/191 (33%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRS 204
H I++RDLK NI + E+ + + DF L+T +K R S
Sbjct: 149 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT----------------------VKSRWS 186
Query: 205 FLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKG---H 261
+F G+ ++APE+I + +
Sbjct: 187 GSHQF--------------------------------EQLSGSILWMAPEVIRMQDKNPY 214
Query: 262 DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PPDL----VGEPTPLRNLI 314
F D ++ G+VL+E++ G P+ + ++ ++ R PDL P ++ L+
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM 274
Query: 315 RRLLEKDPTKR 325
L+K +R
Sbjct: 275 AECLKKKRDER 285
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 125 FSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTKLSP 180
+D IR+ H+ GI++RD+KP N+MI E + L+D+ L+ P
Sbjct: 143 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 199
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 245 VGTEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPF 284
V + + PE+ ++ + +D+++D WSLG + M++ PF
Sbjct: 207 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 247
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 125 FSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTKLSP 180
+D IR+ H+ GI++RD+KP N+MI E + L+D+ L+ P
Sbjct: 123 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 179
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 245 VGTEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPF 284
V + + PE+ ++ + +D+++D WSLG + M++ PF
Sbjct: 187 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI------LCRPPD 302
+ APE ++ + A D W GV L EM YG P+ G + + ++I L RP D
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 249
Query: 303 LVGEPTPLRNLIRRLLEKDPTKR 325
P + N++ + P R
Sbjct: 250 C---PQDIYNVMVQCWAHKPEDR 269
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 46/110 (41%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E V++ ++HP L +L GV + + ++ +L ++ + Q + + +
Sbjct: 72 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 131
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
++RDL N ++ EN + + DF LS ++ T A
Sbjct: 132 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 181
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 13/99 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEM-LYGATPFRGSSRKETF------YRILCRPP 301
++ APE + D W+ GV+L E+ YG +P+ G + + YR + RP
Sbjct: 190 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MERPE 248
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV 340
G P + L+R + +P+ R EI H+ F+ +
Sbjct: 249 ---GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFETM 282
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 125 FSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTKLSP 180
+D IR+ H+ GI++RD+KP N+MI E + L+D+ L+ P
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 178
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 245 VGTEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPF 284
V + + PE+ ++ + +D+++D WSLG + M++ PF
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 46/110 (41%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E V++ ++HP L +L GV + + ++ +L ++ + Q + + +
Sbjct: 61 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
++RDL N ++ EN + + DF LS ++ T A
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 170
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 13/99 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEM-LYGATPFRGSSRKETF------YRILCRPP 301
++ APE + D W+ GV+L E+ YG +P+ G + + YR + RP
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MERPE 237
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV 340
G P + L+R + +P+ R EI H+ F+ +
Sbjct: 238 ---GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFETM 271
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI------LCRPPD 302
+ APE ++ + A D W GV L EM YG P+ G + + ++I L RP D
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 239
Query: 303 LVGEPTPLRNLIRRLLEKDPTKR 325
P + N++ + P R
Sbjct: 240 C---PQDIYNVMVQCWAHKPEDR 259
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEM-LYGATPFRGSSRKETF------YRILCRPP 301
++ APE + D W+ GV+L E+ YG +P+ G + + YR + RP
Sbjct: 423 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MERPE 481
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
G P + L+R + +P+ R EI H+ F+
Sbjct: 482 ---GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFE 513
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 125 FSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTKLSP 180
+D IR+ H+ GI++RD+KP N+MI E + L+D+ L+ P
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 178
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 245 VGTEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPF 284
V + + PE+ ++ + +D+++D WSLG + M++ PF
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 70/173 (40%), Gaps = 10/173 (5%)
Query: 6 NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
N +R L + + + LG GA G V+ + E + V ++L E S +
Sbjct: 7 NQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--- 63
Query: 66 NGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMF 125
+ I E V+ +V++P + RL G+ T V P L ++ + +
Sbjct: 64 -----KEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIG 117
Query: 126 SDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
S + + + +V+RDL N++++ H+ + DF L+ L
Sbjct: 118 SQYLLNWCVQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 169
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 46/110 (41%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E V++ ++HP L +L GV + + ++ +L ++ + Q + + +
Sbjct: 60 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 119
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
++RDL N ++ EN + + DF LS ++ T A
Sbjct: 120 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 169
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 13/99 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEM-LYGATPFRGSSRKETF------YRILCRPP 301
++ APE + D W+ GV+L E+ YG +P+ G + + YR + RP
Sbjct: 178 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MERPE 236
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV 340
G P + L+R + +P+ R EI H+ F+ +
Sbjct: 237 ---GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFETM 270
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEM-LYGATPFRGSSRKETF------YRILCRPP 301
++ APE + D W+ GV+L E+ YG +P+ G + + YR + RP
Sbjct: 384 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MERPE 442
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
G P + L+R + +P+ R EI H+ F+
Sbjct: 443 ---GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFE 474
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 46/110 (41%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E V++ ++HP L +L GV + + ++ +L ++ + Q + + +
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 118
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
++RDL N ++ EN + + DF LS ++ T A
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 13/99 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEM-LYGATPFRGSSRKETF------YRILCRPP 301
++ APE + D W+ GV+L E+ YG +P+ G + + YR + RP
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MERPE 235
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV 340
G P + L+R + +P+ R EI H+ F+ +
Sbjct: 236 ---GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFETM 269
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 46/110 (41%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E V++ ++HP L +L GV + + ++ +L ++ + Q + + +
Sbjct: 61 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 120
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
++RDL N ++ EN + + DF LS ++ T A
Sbjct: 121 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 170
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 13/99 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEM-LYGATPFRGSSRKETF------YRILCRPP 301
++ APE + D W+ GV+L E+ YG +P+ G + + YR + RP
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MERPE 237
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV 340
G P + L+R + +P+ R EI H+ F+ +
Sbjct: 238 ---GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFETM 271
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 71/191 (37%), Gaps = 64/191 (33%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRS 204
H I++RDLK NI + E+ + + DF L+T +K R S
Sbjct: 148 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT----------------------VKSRWS 185
Query: 205 FLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKG---H 261
+F G+ ++APE+I + +
Sbjct: 186 GSHQF--------------------------------EQLSGSILWMAPEVIRMQDKNPY 213
Query: 262 DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PPDL----VGEPTPLRNLI 314
F D ++ G+VL+E++ G P+ + ++ ++ R PDL P ++ L+
Sbjct: 214 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM 273
Query: 315 RRLLEKDPTKR 325
L+K +R
Sbjct: 274 AECLKKKRDER 284
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 46/110 (41%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E V++ ++HP L +L GV + + ++ +L ++ + Q + + +
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
++RDL N ++ EN + + DF LS ++ T A
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 173
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEM-LYGATPFRGSSRKETF------YRILCRPP 301
++ APE + D W+ GV+L E+ YG +P+ G + + YR + RP
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MERPE 240
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFK 338
G P + L+R + +P+ R EI H+ F+
Sbjct: 241 ---GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFE 272
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI------LCRPPD 302
+ APE ++ + A D W GV L EM YG P+ G + + ++I L RP D
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 249
Query: 303 LVGEPTPLRNLIRRLLEKDPTKR 325
P + N++ + P R
Sbjct: 250 C---PQDIYNVMVQCWAHKPEDR 269
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 125 FSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTKLSP 180
+D IR+ H+ GI++RD+KP N+MI E + L+D+ L+ P
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 178
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 245 VGTEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPF 284
V + + PE+ ++ + +D+++D WSLG + M++ PF
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 125 FSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTKLSP 180
+D IR+ H+ GI++RD+KP N+MI E + L+D+ L+ P
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 178
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 245 VGTEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPF 284
V + + PE+ ++ + +D+++D WSLG + M++ PF
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 70/173 (40%), Gaps = 10/173 (5%)
Query: 6 NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
N +R L + + + LG GA G V+ + E + V ++L E S +
Sbjct: 5 NQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--- 61
Query: 66 NGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMF 125
+ I E V+ +V++P + RL G+ T V P L ++ + +
Sbjct: 62 -----KEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIG 115
Query: 126 SDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
S + + + +V+RDL N++++ H+ + DF L+ L
Sbjct: 116 SQYLLNWCVQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 125 FSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTKLSP 180
+D IR+ H+ GI++RD+KP N+MI E + L+D+ L+ P
Sbjct: 123 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 179
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 245 VGTEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPF 284
V + + PE+ ++ + +D+++D WSLG + M++ PF
Sbjct: 187 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 46/110 (41%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E V++ ++HP L +L GV + + ++ +L ++ + Q + + +
Sbjct: 59 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 118
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
++RDL N ++ EN + + DF LS ++ T A
Sbjct: 119 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 13/99 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEM-LYGATPFRGSSRKETF------YRILCRPP 301
++ APE + D W+ GV+L E+ YG +P+ G + + YR + RP
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MERPE 235
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV 340
G P + L+R + +P+ R EI H+ F+ +
Sbjct: 236 ---GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFETM 269
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI------LCRPPD 302
+ APE ++ + A D W GV L EM YG P+ G + + ++I L RP D
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 239
Query: 303 LVGEPTPLRNLIRRLLEKDPTKR 325
P + N++ + P R
Sbjct: 240 C---PQDIYNVMVQCWAHKPEDR 259
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 125 FSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-QENGHIMLVDFDLSTKLSP 180
+D IR+ H+ GI++RD+KP N+MI E + L+D+ L+ P
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 178
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 245 VGTEEYVAPEI-IEGKGHDFAVDWWSLGVVLHEMLYGATPF 284
V + + PE+ ++ + +D+++D WSLG + M++ PF
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 10/83 (12%)
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETFYRI------LCRPPD 302
+ APE ++ + A D W GV L EM YG P+ G + + ++I L RP D
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPED 239
Query: 303 LVGEPTPLRNLIRRLLEKDPTKR 325
P + N++ + P R
Sbjct: 240 C---PQDIYNVMVQCWAHKPEDR 259
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGH-----IMLVDFDLST 176
++ FS T+ H+ ++YRD+KPEN +I G+ I ++DF L+
Sbjct: 99 DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAK 158
Query: 177 K-LSPKTPQASP 187
+ + P+T + P
Sbjct: 159 EYIDPETKKHIP 170
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 70/173 (40%), Gaps = 10/173 (5%)
Query: 6 NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
N +R L + + + LG GA G V+ + E + V ++L E S +
Sbjct: 12 NQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--- 68
Query: 66 NGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMF 125
+ I E V+ +V++P + RL G+ T V P L ++ + +
Sbjct: 69 -----KEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIG 122
Query: 126 SDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
S + + + +V+RDL N++++ H+ + DF L+ L
Sbjct: 123 SQYLLNWCVQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 174
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 46/110 (41%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E V++ ++HP L +L GV + + ++ +L ++ + Q + + +
Sbjct: 63 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 122
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
++RDL N ++ EN + + DF LS ++ T A
Sbjct: 123 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 172
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 13/99 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEM-LYGATPFRGSSRKETF------YRILCRPP 301
++ APE + D W+ GV+L E+ YG +P+ G + + YR + RP
Sbjct: 181 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MERPE 239
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV 340
G P + L+R + +P+ R EI H+ F+ +
Sbjct: 240 ---GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFETM 273
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 13/99 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEM-LYGATPFRGSSRKETF------YRILCRPP 301
++ APE + D W+ GV+L E+ YG +P+ G + + YR + RP
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-MERPE 240
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFFKGV 340
G P + L+R + +P+ R EI H+ F+ +
Sbjct: 241 ---GCPEKVYELMRACWQWNPSDRPSFAEI--HQAFETM 274
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 46/110 (41%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E V++ ++HP L +L GV + + ++ +L ++ + Q + + +
Sbjct: 64 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 123
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQA 185
++RDL N ++ EN + + DF LS ++ T A
Sbjct: 124 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 173
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 70/173 (40%), Gaps = 10/173 (5%)
Query: 6 NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
N +R L + + + LG GA G V+ + E + V ++L E S +
Sbjct: 11 NQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--- 67
Query: 66 NGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMF 125
+ I E V+ +V++P + RL G+ T V P L ++ + +
Sbjct: 68 -----KEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIG 121
Query: 126 SDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
S + + + +V+RDL N++++ H+ + DF L+ L
Sbjct: 122 SQYLLNWCVQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 173
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 70/173 (40%), Gaps = 10/173 (5%)
Query: 6 NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
N +R L + + + LG GA G V+ + E + V ++L E S +
Sbjct: 5 NQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--- 61
Query: 66 NGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMF 125
+ I E V+ +V++P + RL G+ T V P L ++ + +
Sbjct: 62 -----KEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIG 115
Query: 126 SDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
S + + + +V+RDL N++++ H+ + DF L+ L
Sbjct: 116 SQYLLNWCVQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGH-----IMLVDFDLST 176
++ FS T+ H+ ++YRD+KPEN +I G+ I ++DF L+
Sbjct: 99 DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158
Query: 177 K-LSPKTPQASP 187
+ + P+T + P
Sbjct: 159 EYIDPETKKHIP 170
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 71/191 (37%), Gaps = 64/191 (33%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRS 204
H I++RDLK NI + E+ + + DF L+T +K R S
Sbjct: 126 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT----------------------VKSRWS 163
Query: 205 FLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKG---H 261
+F G+ ++APE+I + +
Sbjct: 164 GSHQF--------------------------------EQLSGSILWMAPEVIRMQDKNPY 191
Query: 262 DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PPDL----VGEPTPLRNLI 314
F D ++ G+VL+E++ G P+ + ++ ++ R PDL P ++ L+
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM 251
Query: 315 RRLLEKDPTKR 325
L+K +R
Sbjct: 252 AECLKKKRDER 262
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 71/191 (37%), Gaps = 64/191 (33%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRS 204
H I++RDLK NI + E+ + + DF L+T +K R S
Sbjct: 126 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT----------------------VKSRWS 163
Query: 205 FLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKG---H 261
+F G+ ++APE+I + +
Sbjct: 164 GSHQF--------------------------------EQLSGSILWMAPEVIRMQDKNPY 191
Query: 262 DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PPDL----VGEPTPLRNLI 314
F D ++ G+VL+E++ G P+ + ++ ++ R PDL P ++ L+
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM 251
Query: 315 RRLLEKDPTKR 325
L+K +R
Sbjct: 252 AECLKKKRDER 262
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 122 EQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGH-----IMLVDFDLST 176
++ FS T+ H+ ++YRD+KPEN +I G+ I ++DF L+
Sbjct: 120 DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 179
Query: 177 K-LSPKTPQASP 187
+ + P+T + P
Sbjct: 180 EYIDPETKKHIP 191
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 70/173 (40%), Gaps = 10/173 (5%)
Query: 6 NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
N +R L + + + LG GA G V+ + E + V ++L E S +
Sbjct: 15 NQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--- 71
Query: 66 NGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMF 125
+ I E V+ +V++P + RL G+ T V P L ++ + +
Sbjct: 72 -----KEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIG 125
Query: 126 SDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
S + + + +V+RDL N++++ H+ + DF L+ L
Sbjct: 126 SQYLLNWCVQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 177
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 71/191 (37%), Gaps = 64/191 (33%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRS 204
H I++RDLK NI + E+ + + DF L+T +K R S
Sbjct: 121 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT----------------------VKSRWS 158
Query: 205 FLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKG---H 261
+F G+ ++APE+I + +
Sbjct: 159 GSHQF--------------------------------EQLSGSILWMAPEVIRMQDKNPY 186
Query: 262 DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PPDL----VGEPTPLRNLI 314
F D ++ G+VL+E++ G P+ + ++ ++ R PDL P ++ L+
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM 246
Query: 315 RRLLEKDPTKR 325
L+K +R
Sbjct: 247 AECLKKKRDER 257
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYR--ILCRPPDL 303
GT Y++PE I + + VD ++LG++L E+L+ +S+ T R I+ D
Sbjct: 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFD- 241
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
+ L+++LL K P R EI
Sbjct: 242 ----KKEKTLLQKLLSKKPEDRPNTSEI 265
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
H+ ++ RDLKP NI + + + + DF L T L + K L
Sbjct: 139 HSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTL 185
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 71/191 (37%), Gaps = 64/191 (33%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRS 204
H I++RDLK NI + E+ + + DF L+T +K R S
Sbjct: 123 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT----------------------VKSRWS 160
Query: 205 FLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKG---H 261
+F G+ ++APE+I + +
Sbjct: 161 GSHQF--------------------------------EQLSGSILWMAPEVIRMQDKNPY 188
Query: 262 DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PPDL----VGEPTPLRNLI 314
F D ++ G+VL+E++ G P+ + ++ ++ R PDL P ++ L+
Sbjct: 189 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM 248
Query: 315 RRLLEKDPTKR 325
L+K +R
Sbjct: 249 AECLKKKRDER 259
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 246 GTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYR--ILCRPPDL 303
GT Y++PE I + + VD ++LG++L E+L+ +S+ T R I+ D
Sbjct: 197 GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFD- 255
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
+ L+++LL K P R EI
Sbjct: 256 ----KKEKTLLQKLLSKKPEDRPNTSEI 279
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVL 191
H+ +++RDLKP NI + + + + DF L T L + K L
Sbjct: 153 HSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTL 199
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 148 GIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
I +RDLK +NI++++NG + D L+ + T +A N R G K+
Sbjct: 129 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID----IAPNHRVGTKR 178
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 71/191 (37%), Gaps = 64/191 (33%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRS 204
H I++RDLK NI + E+ + + DF L+T +K R S
Sbjct: 121 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT----------------------VKSRWS 158
Query: 205 FLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKG---H 261
+F G+ ++APE+I + +
Sbjct: 159 GSHQF--------------------------------EQLSGSILWMAPEVIRMQDKNPY 186
Query: 262 DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR---PPDL----VGEPTPLRNLI 314
F D ++ G+VL+E++ G P+ + ++ ++ R PDL P ++ L+
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLM 246
Query: 315 RRLLEKDPTKR 325
L+K +R
Sbjct: 247 AECLKKKRDER 257
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 148 GIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
I +RDLK +NI++++NG + D L+ + T +A N R G K+
Sbjct: 128 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID----IAPNHRVGTKR 177
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 148 GIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
I +RDLK +NI++++NG + D L+ + T +A N R G K+
Sbjct: 131 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID----IAPNHRVGTKR 180
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 148 GIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
I +RDLK +NI++++NG + D L+ + T +A N R G K+
Sbjct: 134 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID----IAPNHRVGTKR 183
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 148 GIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
I +RDLK +NI++++NG + D L+ + T +A N R G K+
Sbjct: 154 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID----IAPNHRVGTKR 203
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 148 GIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKK 201
I +RDLK +NI++++NG + D L+ + T +A N R G K+
Sbjct: 167 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID----IAPNHRVGTKR 216
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 246 GTEEYVAPEIIEGKG---HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR--- 299
G+ ++APE+I + + F D ++ G+VL+E++ G P+ + ++ ++ R
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 255
Query: 300 PPDL----VGEPTPLRNLIRRLLEKDPTKR 325
PDL P ++ L+ L+K +R
Sbjct: 256 SPDLSKVRSNCPKAMKRLMAECLKKKRDER 285
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
H I++RDLK NI + E+ + + DF L+T+ S
Sbjct: 149 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKS 183
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 246 GTEEYVAPEIIEGKG---HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR--- 299
G+ ++APE+I + + F D ++ G+VL+E++ G P+ + ++ ++ R
Sbjct: 188 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 247
Query: 300 PPDL----VGEPTPLRNLIRRLLEKDPTKR 325
PDL P ++ L+ L+K +R
Sbjct: 248 SPDLSKVRSNCPKAMKRLMAECLKKKRDER 277
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
H I++RDLK NI + E+ + + DF L+T+ S
Sbjct: 141 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKS 175
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 246 GTEEYVAPEIIEGKG---HDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCR--- 299
G+ ++APE+I + + F D ++ G+VL+E++ G P+ + ++ ++ R
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 300 PPDL----VGEPTPLRNLIRRLLEKDPTKR 325
PDL P ++ L+ L+K +R
Sbjct: 228 SPDLSKVRSNCPKAMKRLMAECLKKKRDER 257
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
H I++RDLK NI + E+ + + DF L+T+ S
Sbjct: 121 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKS 155
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 247 TEEYVAPEII-EGKGHDFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRILCRPP 301
T+ Y +P ++ + A+D W+ G + EML G T F G+ E IL P
Sbjct: 187 TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIP 242
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 68/167 (40%), Gaps = 10/167 (5%)
Query: 6 NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
N +R L + + + LG GA G V+ + E + V ++L E S +
Sbjct: 7 NQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--- 63
Query: 66 NGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMF 125
+ I E V+ +V++P + RL G+ T V + P L ++ + +
Sbjct: 64 -----KEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIG 117
Query: 126 SDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDF 172
S + + + +V+RDL N++++ H+ + DF
Sbjct: 118 SQYLLNWCVQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 69/169 (40%), Gaps = 10/169 (5%)
Query: 10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDK 69
+R L + + + LG GA G V+ + E + V ++L E S +
Sbjct: 6 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------- 58
Query: 70 YRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDT 129
+ I E V+ +V++P + RL G+ T V P L ++ + + S
Sbjct: 59 -KEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYL 116
Query: 130 IRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
+ + + +V+RDL N++++ H+ + DF L+ L
Sbjct: 117 LNWCVQIAEGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 164
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 68/167 (40%), Gaps = 10/167 (5%)
Query: 6 NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
N +R L + + + LG GA G V+ + E + V ++L E S +
Sbjct: 7 NQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--- 63
Query: 66 NGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMF 125
+ I E V+ +V++P + RL G+ T V + P L ++ + +
Sbjct: 64 -----KEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIG 117
Query: 126 SDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDF 172
S + + + +V+RDL N++++ H+ + DF
Sbjct: 118 SQYLLNWCVQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 32.3 bits (72), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 69/169 (40%), Gaps = 10/169 (5%)
Query: 10 IRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDK 69
+R L + + + LG GA G V+ + E + V ++L E S +
Sbjct: 3 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN------- 55
Query: 70 YRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDT 129
+ I E V+ +V++P + RL G+ T V P L ++ + + S
Sbjct: 56 -KEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYL 113
Query: 130 IRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
+ + + +V+RDL N++++ H+ + DF L+ L
Sbjct: 114 LNWCVQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 161
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 32.3 bits (72), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTP 183
H I +RD K +N++++ + +L DF L+ + P P
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKP 178
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 5/39 (12%)
Query: 245 VGTEEYVAPEIIEG-----KGHDFAVDWWSLGVVLHEML 278
VGT Y+APE++EG + +D +++G+VL E++
Sbjct: 186 VGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 247 TEEYVAPEIIEGKGH-DFAVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL 297
T Y PEI+ G H +VD WS+ + EML F G S + ++I
Sbjct: 200 TLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIF 251
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 250 YVAPEIIEGKGHDF---AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRIL---CRPPDL 303
+VAPE ++ K D + D WS V+L E++ PF S E ++ RP
Sbjct: 174 WVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPTIP 233
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
G + L + +DP KR + I
Sbjct: 234 PGISPHVSKLXKICXNEDPAKRPKFDXI 261
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKE-----TFYRILCRPPDL 303
++ PE I + D WS GV+L E+ YG P+ S E T R+L RP
Sbjct: 201 WMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVC 260
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
P + +++ +++P +R+ ++EI
Sbjct: 261 ---PKEVYDVMLGCWQREPQQRLNIKEI 285
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 70/173 (40%), Gaps = 10/173 (5%)
Query: 6 NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
N +R L + + + LG GA G V+ + E + V +L E S + N +
Sbjct: 39 NQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPK-ANKE 97
Query: 66 NGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMF 125
D E V+ +V++P + RL G+ T V P L ++ + +
Sbjct: 98 ILD-------EAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIG 149
Query: 126 SDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
S + + + +V+RDL N++++ H+ + DF L+ L
Sbjct: 150 SQYLLNWCVQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 201
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 68/167 (40%), Gaps = 10/167 (5%)
Query: 6 NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
N +R L + + + LG GA G V+ + E + V ++L E S +
Sbjct: 9 NQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--- 65
Query: 66 NGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMF 125
+ I E V+ +V++P + RL G+ T V + P L ++ + +
Sbjct: 66 -----KEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIG 119
Query: 126 SDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDF 172
S + + + +V+RDL N++++ H+ + DF
Sbjct: 120 SQYLLNWCVQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDF 165
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 70/173 (40%), Gaps = 10/173 (5%)
Query: 6 NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
N +R L + + + L GA G V+ + E + V ++L E S +
Sbjct: 12 NQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--- 68
Query: 66 NGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMF 125
+ I E V+ +V++P + RL G+ T V + P L ++ + +
Sbjct: 69 -----KEILDEAYVMASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIG 122
Query: 126 SDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
S + + + +V+RDL N++++ H+ + DF L+ L
Sbjct: 123 SQYLLNWCVQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 174
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/100 (20%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E R+L+ HP + RL GV + + + ++ G D + + + ++ ++
Sbjct: 162 EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGD 221
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
I +RDL N ++ E + + DF +S
Sbjct: 222 AAAGMEYLESKCCI-HRDLAARNCLVTEKNVLKISDFGMS 260
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 32.0 bits (71), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/100 (20%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E R+L+ HP + RL GV + + + ++ G D + + + ++ ++
Sbjct: 162 EARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGD 221
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
I +RDL N ++ E + + DF +S
Sbjct: 222 AAAGMEYLESKCCI-HRDLAARNCLVTEKNVLKISDFGMS 260
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 50/140 (35%), Gaps = 24/140 (17%)
Query: 59 KELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRK 118
K L N + + R + E VL+ V HP + +L G S D + ++Y L +
Sbjct: 59 KMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLR 118
Query: 119 QQSE-----------------------QMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLK 155
+ + + D I F M +V+RDL
Sbjct: 119 ESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA-EMSLVHRDLA 177
Query: 156 PENIMIQENGHIMLVDFDLS 175
NI++ E + + DF LS
Sbjct: 178 ARNILVAEGRKMKISDFGLS 197
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 31.6 bits (70), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 76/228 (33%), Gaps = 88/228 (38%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRS 204
H I++RD+K N++I +G + L DF L+ S LA N++ R
Sbjct: 142 HRNKILHRDMKAANVLITRDGVLKLADFGLARAFS-----------LAKNSQPNRYXNR- 189
Query: 205 FLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-KGHDF 263
V T Y PE++ G + +
Sbjct: 190 ----------------------------------------VVTLWYRPPELLLGERDYGP 209
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI--LC----------------------- 298
+D W G ++ EM + +G++ + I LC
Sbjct: 210 PIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELV 269
Query: 299 ---------RPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
R V +P L +LI +LL DP +RI ++ H+FF
Sbjct: 270 KGQKRKVKDRLKAYVRDPYAL-DLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 31.6 bits (70), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 67/167 (40%), Gaps = 10/167 (5%)
Query: 6 NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
N +R L + + + LG GA G V+ + E + V ++L E S +
Sbjct: 7 NQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--- 63
Query: 66 NGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMF 125
+ I E V+ +V++P + RL G+ T V P L ++ + +
Sbjct: 64 -----KEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIG 117
Query: 126 SDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDF 172
S + + + +V+RDL N++++ H+ + DF
Sbjct: 118 SQYLLNWCVQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 31.6 bits (70), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 76/228 (33%), Gaps = 88/228 (38%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRS 204
H I++RD+K N++I +G + L DF L+ S LA N++ R
Sbjct: 142 HRNKILHRDMKAANVLITRDGVLKLADFGLARAFS-----------LAKNSQPNRYXNR- 189
Query: 205 FLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-KGHDF 263
V T Y PE++ G + +
Sbjct: 190 ----------------------------------------VVTLWYRPPELLLGERDYGP 209
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI--LC----------------------- 298
+D W G ++ EM + +G++ + I LC
Sbjct: 210 PIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELV 269
Query: 299 ---------RPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
R V +P L +LI +LL DP +RI ++ H+FF
Sbjct: 270 KGQKRKVKDRLKAYVRDPYAL-DLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 31.6 bits (70), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 6/49 (12%)
Query: 145 HNMGIVYRDLKPENIMIQENG-----HIMLVDFDLSTK-LSPKTPQASP 187
H ++YRD+KPEN ++ G I ++DF L+ + + P+T + P
Sbjct: 117 HTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKKHIP 165
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 67/167 (40%), Gaps = 10/167 (5%)
Query: 6 NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
N +R L + + + LG GA G V+ + E + V ++L E S +
Sbjct: 12 NQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--- 68
Query: 66 NGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMF 125
+ I E V+ +V++P + RL G+ T V P L ++ + +
Sbjct: 69 -----KEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIG 122
Query: 126 SDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDF 172
S + + + +V+RDL N++++ H+ + DF
Sbjct: 123 SQYLLNWCVQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDF 168
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 67/167 (40%), Gaps = 10/167 (5%)
Query: 6 NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
N +R L + + + LG GA G V+ + E + V ++L E S +
Sbjct: 5 NQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--- 61
Query: 66 NGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMF 125
+ I E V+ +V++P + RL G+ T V P L ++ + +
Sbjct: 62 -----KEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIG 115
Query: 126 SDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDF 172
S + + + +V+RDL N++++ H+ + DF
Sbjct: 116 SQYLLNWCVQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDF 161
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 31.6 bits (70), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 76/228 (33%), Gaps = 88/228 (38%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRS 204
H I++RD+K N++I +G + L DF L+ S LA N++ R
Sbjct: 142 HRNKILHRDMKAANVLITRDGVLKLADFGLARAFS-----------LAKNSQPNRYXNR- 189
Query: 205 FLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-KGHDF 263
V T Y PE++ G + +
Sbjct: 190 ----------------------------------------VVTLWYRPPELLLGERDYGP 209
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI--LC----------------------- 298
+D W G ++ EM + +G++ + I LC
Sbjct: 210 PIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELV 269
Query: 299 ---------RPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
R V +P L +LI +LL DP +RI ++ H+FF
Sbjct: 270 KGQKRKVKDRLKAYVRDPYAL-DLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 76/228 (33%), Gaps = 88/228 (38%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRS 204
H I++RD+K N++I +G + L DF L+ S LA N++ R
Sbjct: 141 HRNKILHRDMKAANVLITRDGVLKLADFGLARAFS-----------LAKNSQPNRYXNR- 188
Query: 205 FLSKFCSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEG-KGHDF 263
V T Y PE++ G + +
Sbjct: 189 ----------------------------------------VVTLWYRPPELLLGERDYGP 208
Query: 264 AVDWWSLGVVLHEMLYGATPFRGSSRKETFYRI--LC----------------------- 298
+D W G ++ EM + +G++ + I LC
Sbjct: 209 PIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELV 268
Query: 299 ---------RPPDLVGEPTPLRNLIRRLLEKDPTKRIGVEEIKGHEFF 337
R V +P L +LI +LL DP +RI ++ H+FF
Sbjct: 269 KGQKRKVKDRLKAYVRDPYAL-DLIDKLLVLDPAQRIDSDDALNHDFF 315
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 31.6 bits (70), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFXX 134
E V+ + HP L +L GV + ++ L LR Q+ +F+ +T+
Sbjct: 52 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG--LFAAETLLGMC 109
Query: 135 XXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+++RDL N ++ EN I + DF ++
Sbjct: 110 LDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMT 150
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF 293
+++APE I K + D WS GV+L E+ G +P+ G E F
Sbjct: 266 KWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDF 311
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 31.6 bits (70), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFXX 134
E V+ + HP L +L GV + ++ L LR Q+ +F+ +T+
Sbjct: 55 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG--LFAAETLLGMC 112
Query: 135 XXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+++RDL N ++ EN I + DF ++
Sbjct: 113 LDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMT 153
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 14/160 (8%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G+G G+V + V+ A+K + E +++ + +K++ E ++ N+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI------EKFQEFQREVFIMSNL 80
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDL-HSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
HP + +L G++ + +++ P DL H L + +S
Sbjct: 81 NHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM 138
Query: 143 XXHNMGIVYRDLKPENIMIQ---ENGHIM--LVDFDLSTK 177
N IV+RDL+ NI +Q EN + + DF LS +
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQ 178
Score = 28.1 bits (61), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 293 FYRILCRPPDLVGEPTPLRNLIRRLLEK-DPTK-----RIGVEEIKGHEFFKGVNWELLL 346
Y ++ PP +V E P +L RLL+K P K R+ ++ G E+ + N ++
Sbjct: 88 LYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVH 147
Query: 347 KISRPPNI 354
+ R PNI
Sbjct: 148 RDLRSPNI 155
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKET 292
++APE I D WS GVVL E+ YG P+ G S ++
Sbjct: 213 WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV 256
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 71/184 (38%), Gaps = 31/184 (16%)
Query: 10 IRSLDFSCLRIVSALG-----RGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNN 64
++ + S +R + LG + KG +F E +++ A+K L +
Sbjct: 20 LKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKT------------LKDK 67
Query: 65 DNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS---LRKQQS 121
G E + ++HP + L GV++ D+ + YC DLH +R S
Sbjct: 68 AEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHS 127
Query: 122 EQMFSDD--TIR---------FXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLV 170
+ +DD T++ + +V++DL N+++ + ++ +
Sbjct: 128 DVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKIS 187
Query: 171 DFDL 174
D L
Sbjct: 188 DLGL 191
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFXX 134
E V+ + HP L +L GV + ++ L LR Q+ +F+ +T+
Sbjct: 52 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG--LFAAETLLGMC 109
Query: 135 XXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+++RDL N ++ EN I + DF ++
Sbjct: 110 LDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMT 150
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 69/173 (39%), Gaps = 10/173 (5%)
Query: 6 NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
N +R L + + + L GA G V+ + E + V ++L E S +
Sbjct: 12 NQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--- 68
Query: 66 NGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMF 125
+ I E V+ +V++P + RL G+ T V P L ++ + +
Sbjct: 69 -----KEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIG 122
Query: 126 SDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
S + + + +V+RDL N++++ H+ + DF L+ L
Sbjct: 123 SQYLLNWCVQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 174
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 69/173 (39%), Gaps = 10/173 (5%)
Query: 6 NDRPIRSLDFSCLRIVSALGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNND 65
N +R L + + + L GA G V+ + E + V ++L E S +
Sbjct: 5 NQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--- 61
Query: 66 NGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMF 125
+ I E V+ +V++P + RL G+ T V P L ++ + +
Sbjct: 62 -----KEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIG 115
Query: 126 SDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
S + + + +V+RDL N++++ H+ + DF L+ L
Sbjct: 116 SQYLLNWCVQIAKGMNYL-EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFXX 134
E V+ + HP L +L GV + ++ L LR Q+ +F+ +T+
Sbjct: 50 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG--LFAAETLLGMC 107
Query: 135 XXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+++RDL N ++ EN I + DF ++
Sbjct: 108 LDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMT 148
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKET 292
++APE I D WS GVVL E+ YG P+ G S ++
Sbjct: 196 WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV 239
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 71/184 (38%), Gaps = 31/184 (16%)
Query: 10 IRSLDFSCLRIVSALG-----RGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNN 64
++ + S +R + LG + KG +F E +++ A+K L +
Sbjct: 3 LKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKT------------LKDK 50
Query: 65 DNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS---LRKQQS 121
G E + ++HP + L GV++ D+ + YC DLH +R S
Sbjct: 51 AEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHS 110
Query: 122 EQMFSDD--TIR---------FXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLV 170
+ +DD T++ + +V++DL N+++ + ++ +
Sbjct: 111 DVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKIS 170
Query: 171 DFDL 174
D L
Sbjct: 171 DLGL 174
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 50/140 (35%), Gaps = 24/140 (17%)
Query: 59 KELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRK 118
K L N + + R + E VL+ V HP + +L G S D + ++Y L +
Sbjct: 59 KMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLR 118
Query: 119 QQSE-----------------------QMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLK 155
+ + + D I F M +V+RDL
Sbjct: 119 ESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA-EMKLVHRDLA 177
Query: 156 PENIMIQENGHIMLVDFDLS 175
NI++ E + + DF LS
Sbjct: 178 ARNILVAEGRKMKISDFGLS 197
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 50/140 (35%), Gaps = 24/140 (17%)
Query: 59 KELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRK 118
K L N + + R + E VL+ V HP + +L G S D + ++Y L +
Sbjct: 59 KMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLR 118
Query: 119 QQSE-----------------------QMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLK 155
+ + + D I F M +V+RDL
Sbjct: 119 ESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA-EMKLVHRDLA 177
Query: 156 PENIMIQENGHIMLVDFDLS 175
NI++ E + + DF LS
Sbjct: 178 ARNILVAEGRKMKISDFGLS 197
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFXX 134
E V+ + HP L +L GV + ++ L LR Q+ +F+ +T+
Sbjct: 72 EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG--LFAAETLLGMC 129
Query: 135 XXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+++RDL N ++ EN I + DF ++
Sbjct: 130 LDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMT 170
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS-LRKQQSEQMFSDDTIRFXX 134
E V+ + HP L +L GV + ++ L LR Q+ +F+ +T+
Sbjct: 53 EAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRG--LFAAETLLGMC 110
Query: 135 XXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+++RDL N ++ EN I + DF ++
Sbjct: 111 LDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMT 151
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 14/160 (8%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G+G G+V + V+ A+K + E +++ + +K++ E ++ N+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI------EKFQEFQREVFIMSNL 80
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDL-HSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
HP + +L G++ + +++ P DL H L + +S
Sbjct: 81 NHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM 138
Query: 143 XXHNMGIVYRDLKPENIMIQ---ENGHIM--LVDFDLSTK 177
N IV+RDL+ NI +Q EN + + DF LS +
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ 178
Score = 28.1 bits (61), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 293 FYRILCRPPDLVGEPTPLRNLIRRLLEK-DPTK-----RIGVEEIKGHEFFKGVNWELLL 346
Y ++ PP +V E P +L RLL+K P K R+ ++ G E+ + N ++
Sbjct: 88 LYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVH 147
Query: 347 KISRPPNI 354
+ R PNI
Sbjct: 148 RDLRSPNI 155
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKE-----TFYRILCRPPDL 303
++ PE I + D WSLGVVL E+ YG P+ S E T R+L RP
Sbjct: 196 WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTC 255
Query: 304 VGEPTPLRNLIRRLLEKDPTKRIGVEEI 331
P + L+ +++P R ++ I
Sbjct: 256 ---PQEVYELMLGCWQREPHMRKNIKGI 280
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 72/198 (36%), Gaps = 70/198 (35%)
Query: 150 VYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRSFLSKF 209
++RDL N M+ E+ + + DF LS K+ SG R+ SK
Sbjct: 159 IHRDLAARNCMLAEDMTVCVADFGLSRKI-----------------YSGDYYRQGCASKL 201
Query: 210 CSSGISLEDPVHXXXXXXXXXXXXXXXXXXXXXXFVGTEEYVAPEIIEGKGHDFAVDWWS 269
PV +++A E + + D W+
Sbjct: 202 ---------PV----------------------------KWLALESLADNLYTVHSDVWA 224
Query: 270 LGVVLHE-MLYGATPFRGSSRKETF-YRI----LCRPPDLVGEPTPLRNLIRRLLEKDPT 323
GV + E M G TP+ G E + Y I L +PP+ + E + +L+ + DP
Sbjct: 225 FGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECMEE---VYDLMYQCWSADPK 281
Query: 324 K-------RIGVEEIKGH 334
+ R+ +E I GH
Sbjct: 282 QRPSFTCLRMELENILGH 299
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF 293
++ APE I D WS G++L+E++ YG P+ G + +
Sbjct: 176 KWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVM 221
Score = 28.5 bits (62), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/101 (19%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDY-CPGRDLHSLRKQQSEQMFSDDTIRFXX 134
E +++ ++H L RL V++ ++ + +Y G L L+ + ++ I F
Sbjct: 58 EANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSA 117
Query: 135 XXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
++RDL+ N+++ E+ + DF L+
Sbjct: 118 QIAEGMAYIERK-NYIHRDLRAANVLVSESLMCKIADFGLA 157
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 11/84 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF------YRILCRPP 301
++ APE I D WS G++L E++ +G P+ G + E YR + RP
Sbjct: 170 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR-MVRPD 228
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKR 325
+ P L L+R ++ P R
Sbjct: 229 NC---PEELYQLMRLCWKERPEDR 249
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF 293
+++APE + + + D WS GV+L E+ G +P+ G +E F
Sbjct: 217 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 54/140 (38%), Gaps = 20/140 (14%)
Query: 52 DLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLRGVLSTDKFVGYAIDYCP- 109
D K+ KE + D+ +R + E VL + HP + L G ++ AI+Y P
Sbjct: 54 DAAIKRMKEYASKDD---HRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 110
Query: 110 GRDLHSLRKQQ--------------SEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLK 155
G L LRK + + + S + F ++RDL
Sbjct: 111 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLA 169
Query: 156 PENIMIQENGHIMLVDFDLS 175
NI++ EN + DF LS
Sbjct: 170 ARNILVGENYVAKIADFGLS 189
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF------YRILCRPP 301
++ APE I D WS G++L E++ +G P+ G + E YR++ RP
Sbjct: 171 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV-RPD 229
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKR 325
+ P L L+R ++ P R
Sbjct: 230 NC---PEELYQLMRLCWKERPEDR 250
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 54/140 (38%), Gaps = 20/140 (14%)
Query: 52 DLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLRGVLSTDKFVGYAIDYCP- 109
D K+ KE + D+ +R + E VL + HP + L G ++ AI+Y P
Sbjct: 44 DAAIKRMKEYASKDD---HRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 100
Query: 110 GRDLHSLRKQQ--------------SEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLK 155
G L LRK + + + S + F ++RDL
Sbjct: 101 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRDLA 159
Query: 156 PENIMIQENGHIMLVDFDLS 175
NI++ EN + DF LS
Sbjct: 160 ARNILVGENYVAKIADFGLS 179
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 69/164 (42%), Gaps = 14/164 (8%)
Query: 18 LRIVSALGRGAKGVVFLVK-DVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFE 76
L+ +S LG+G G V L + D + AL + K+L ++ D+ R E
Sbjct: 12 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAV---------KQLQHS-GPDQQRDFQRE 61
Query: 77 QRVLRNVEHPLLPRLRGVLSTD--KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXX 134
++L+ + + + RGV + + ++Y P L ++ ++ + + +
Sbjct: 62 IQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSS 121
Query: 135 XXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
+ V+RDL NI+++ H+ + DF L+ L
Sbjct: 122 QICKGMEYLG-SRRCVHRDLAARNILVESEAHVKIADFGLAKLL 164
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEML 278
+ APE + A D WS GV LHE+L
Sbjct: 195 WYAPECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 69/164 (42%), Gaps = 14/164 (8%)
Query: 18 LRIVSALGRGAKGVVFLVK-DVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFE 76
L+ +S LG+G G V L + D + AL + K+L ++ D+ R E
Sbjct: 13 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAV---------KQLQHS-GPDQQRDFQRE 62
Query: 77 QRVLRNVEHPLLPRLRGVLSTD--KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXX 134
++L+ + + + RGV + + ++Y P L ++ ++ + + +
Sbjct: 63 IQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSS 122
Query: 135 XXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
+ V+RDL NI+++ H+ + DF L+ L
Sbjct: 123 QICKGMEYLG-SRRCVHRDLAARNILVESEAHVKIADFGLAKLL 165
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 250 YVAPEIIEGKGHDFAVDWWSLGVVLHEML 278
+ APE + A D WS GV LHE+L
Sbjct: 183 WYAPECLMQSKFYIASDVWSFGVTLHELL 211
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF 293
+++APE + + + D WS GV+L E+ G +P+ G +E F
Sbjct: 202 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 247
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF------YRILCRPP 301
++ APE I D WS G++L E++ +G P+ G + E YR++ RP
Sbjct: 183 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV-RPD 241
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKR 325
+ P L L+R ++ P R
Sbjct: 242 NC---PEELYQLMRLCWKERPEDR 262
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF 293
+++APE + + + D WS GV+L E+ G +P+ G +E F
Sbjct: 217 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF------YRILCRPP 301
++ APE I D WS G++L E++ +G P+ G + E YR++ RP
Sbjct: 180 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV-RPD 238
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKR 325
+ P L L+R ++ P R
Sbjct: 239 NC---PEELYQLMRLCWKERPEDR 259
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF------YRILCRPP 301
++ APE I D WS G++L E++ +G P+ G + E YR++ RP
Sbjct: 185 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV-RPD 243
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKR 325
+ P L L+R ++ P R
Sbjct: 244 NC---PEELYQLMRLCWKERPEDR 264
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF------YRILCRPP 301
++ APE I D WS G++L E++ +G P+ G + E YR++ RP
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV-RPD 233
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKR 325
+ P L L+R ++ P R
Sbjct: 234 NC---PEELYQLMRLCWKERPEDR 254
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF------YRILCRPP 301
++ APE I D WS G++L E++ +G P+ G + E YR++ RP
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV-RPD 239
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKR 325
+ P L L+R ++ P R
Sbjct: 240 NC---PEELYQLMRLCWKERPEDR 260
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF------YRILCRPP 301
++ APE I D WS G++L E++ +G P+ G + E YR++ RP
Sbjct: 176 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV-RPD 234
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKR 325
+ P L L+R ++ P R
Sbjct: 235 NC---PEELYQLMRLCWKERPEDR 255
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF 293
+++APE + + + D WS GV+L E+ G +P+ G +E F
Sbjct: 210 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 255
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF 293
+++APE + + + D WS GV+L E+ G +P+ G +E F
Sbjct: 258 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 303
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF------YRILCRPP 301
++ APE I D WS G++L E++ +G P+ G + E YR++ RP
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV-RPD 233
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKR 325
+ P L L+R ++ P R
Sbjct: 234 NC---PEELYQLMRLCWKERPEDR 254
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF 293
+++APE + + + D WS GV+L E+ G +P+ G +E F
Sbjct: 206 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 251
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF 293
+++APE + + + D WS GV+L E+ G +P+ G +E F
Sbjct: 217 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF 293
+++APE + + + D WS GV+L E+ G +P+ G +E F
Sbjct: 209 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 254
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKET 292
++ APE I D WS GV++ E YG P+RG E
Sbjct: 175 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 219
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF 293
+++APE + + + D WS GV+L E+ G +P+ G +E F
Sbjct: 217 KWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 262
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF------YRILCRPP 301
++ APE I D WS G++L E++ +G P+ G + E YR++ RP
Sbjct: 177 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV-RPD 235
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKR 325
+ P L L+R ++ P R
Sbjct: 236 NC---PEELYQLMRLCWKERPEDR 256
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 7/121 (5%)
Query: 56 KKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS 115
K K+ DN +K+ E +++N++HP + +L G++ + Y G H
Sbjct: 58 KTCKKDCTLDNKEKFMS---EAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHY 114
Query: 116 L-RKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDL 174
L R + S ++ T+ ++ V+RD+ NI++ + L DF L
Sbjct: 115 LERNKNSLKVL---TLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGL 171
Query: 175 S 175
S
Sbjct: 172 S 172
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKET 292
++ APE I D WS GV++ E YG P+RG E
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 223
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF------YRILCRPP 301
++ APE I D WS G++L E++ +G P+ G + E YR++ RP
Sbjct: 184 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV-RPD 242
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKR 325
+ P L L+R ++ P R
Sbjct: 243 NC---PEELYQLMRLCWKERPEDR 263
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/164 (20%), Positives = 69/164 (42%), Gaps = 14/164 (8%)
Query: 18 LRIVSALGRGAKGVVFLVK-DVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFE 76
L+ +S LG+G G V L + D + AL + K+L ++ D+ R E
Sbjct: 25 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAV---------KQLQHS-GPDQQRDFQRE 74
Query: 77 QRVLRNVEHPLLPRLRGVLSTD--KFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXX 134
++L+ + + + RGV + + ++Y P L ++ ++ + + +
Sbjct: 75 IQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSS 134
Query: 135 XXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
+ V+RDL NI+++ H+ + DF L+ L
Sbjct: 135 QICKGMEYLG-SRRCVHRDLAARNILVESEAHVKIADFGLAKLL 177
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKET 292
++ APE I D WS GV++ E YG P+RG E
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 223
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF------YRILCRPP 301
++ APE I D WS G++L E++ +G P+ G + E YR++ RP
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV-RPD 239
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKR 325
+ P L L+R ++ P R
Sbjct: 240 NC---PEELYQLMRLCWKERPEDR 260
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKET 292
++ APE I D WS GV++ E YG P+RG E
Sbjct: 173 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 217
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKET 292
++ APE I D WS GV++ E YG P+RG E
Sbjct: 185 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 229
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKET 292
++ APE I D WS GV++ E YG P+RG E
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 239
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKET 292
++ APE I D WS GV++ E YG P+RG E
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 239
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 7/121 (5%)
Query: 56 KKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS 115
K K+ DN +K+ E +++N++HP + +L G++ + Y G H
Sbjct: 46 KTCKKDCTLDNKEKFMS---EAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHY 102
Query: 116 L-RKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDL 174
L R + S ++ T+ ++ V+RD+ NI++ + L DF L
Sbjct: 103 LERNKNSLKVL---TLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGL 159
Query: 175 S 175
S
Sbjct: 160 S 160
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF------YRILCRPP 301
++ APE I D WS G++L E++ +G P+ G + E YR++ RP
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV-RPD 233
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKR 325
+ P L L+R ++ P R
Sbjct: 234 NC---PEELYQLMRLCWKERPEDR 254
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF------YRILCRPP 301
++ APE I D WS G++L E++ +G P+ G + E YR++ RP
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV-RPD 233
Query: 302 DLVGEPTPLRNLIRRLLEKDPTKR 325
+ P L L+R ++ P R
Sbjct: 234 NC---PEELYQLMRLCWKERPEDR 254
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 7/121 (5%)
Query: 56 KKSKELTNNDNGDKYRRISFEQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHS 115
K K+ DN +K+ E +++N++HP + +L G++ + Y G H
Sbjct: 42 KTCKKDCTLDNKEKFMS---EAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHY 98
Query: 116 L-RKQQSEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDL 174
L R + S ++ T+ ++ V+RD+ NI++ + L DF L
Sbjct: 99 LERNKNSLKVL---TLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGL 155
Query: 175 S 175
S
Sbjct: 156 S 156
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKET 292
++ APE I D WS GV++ E YG P+RG E
Sbjct: 193 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 237
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKET 292
++ APE I D WS GV++ E YG P+RG E
Sbjct: 537 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 581
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKET 292
++ APE I D WS GV++ E YG P+RG E
Sbjct: 538 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 582
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 149 IVYRDLKPENIMIQENGHIMLVDFDLSTKL 178
V+RDL NI+++ H+ + DF L+ L
Sbjct: 132 CVHRDLAARNILVESEAHVKIADFGLAKLL 161
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 17/108 (15%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFV--------GYAIDYCPGRDLHSLRKQQSEQMFSD 127
E +V++ + H L +L V+S + G +D+ G LR Q M +
Sbjct: 229 EAQVMKKLRHEKLVQLYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 288
Query: 128 DTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
M V+RDL+ NI++ EN + DF L+
Sbjct: 289 ---------IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 327
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF 293
+++APE + + + D WS GV++ E+ G +P+ G +E F
Sbjct: 270 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 315
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 17/108 (15%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFV--------GYAIDYCPGRDLHSLRKQQSEQMFSD 127
E +V++ + H L +L V+S + G +D+ G LR Q M +
Sbjct: 312 EAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 371
Query: 128 DTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
M V+RDL+ NI++ EN + DF L+
Sbjct: 372 ---------IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 410
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 17/108 (15%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFV--------GYAIDYCPGRDLHSLRKQQSEQMFSD 127
E +V++ + H L +L V+S + G +D+ G LR Q M +
Sbjct: 229 EAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 288
Query: 128 DTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
M V+RDL+ NI++ EN + DF L+
Sbjct: 289 ---------IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 327
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF 293
+++APE + + + D WS GV++ E+ G +P+ G +E F
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF 293
+++APE + + + D WS GV++ E+ G +P+ G +E F
Sbjct: 211 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 256
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 17/108 (15%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFV--------GYAIDYCPGRDLHSLRKQQSEQMFSD 127
E +V++ + H L +L V+S + G +D+ G LR Q M +
Sbjct: 229 EAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 288
Query: 128 DTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
M V+RDL+ NI++ EN + DF L+
Sbjct: 289 ---------IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 327
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 148 GIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
I +RDL N++++ +G ++ DF LS +L+
Sbjct: 140 AISHRDLNSRNVLVKNDGTCVISDFGLSMRLT 171
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF 293
+++APE + + + D WS GV++ E+ G +P+ G +E F
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF 293
+++APE + + + D WS GV++ E+ G +P+ G +E F
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF 293
+++APE + + + D WS GV++ E+ G +P+ G +E F
Sbjct: 213 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 258
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
Query: 125 FSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-----QENGHIMLVDFDLSTKL- 178
FS T+ H +VYRD+KP+N +I + I +VDF +
Sbjct: 103 FSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162
Query: 179 SPKTPQASP 187
P T Q P
Sbjct: 163 DPVTKQHIP 171
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF 293
+++APE + + + D WS GV++ E+ G +P+ G +E F
Sbjct: 216 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 261
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
Query: 125 FSDDTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMI-----QENGHIMLVDFDLSTKL- 178
FS T+ H +VYRD+KP+N +I + I +VDF +
Sbjct: 102 FSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 161
Query: 179 SPKTPQASP 187
P T Q P
Sbjct: 162 DPVTKQHIP 170
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E +V++ + H L +L V+S + + I+Y L K + + +
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
M V+RDL+ NI++ EN + DF L+
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF 293
+++APE + + + D WS GV++ E+ G +P+ G +E F
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF 293
+++APE + + + D WS GV++ E+ G +P+ G +E F
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF 293
+++APE + + + D WS GV++ E+ G +P+ G +E F
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF 293
+++APE + + + D WS GV++ E+ G +P+ G +E F
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF 293
+++APE + + + D WS GV++ E+ G +P+ G +E F
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E +V++ + H L +L V+S + + I+Y L K + + +
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 136 XXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
M V+RDL+ NI++ EN + DF L+
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 245 VGTEEYVAPEIIEG-----KGHDFAVDWWSLGVVLHEMLYGATPFRG 286
VGT Y+APE++EG + +D +++G+VL E+ T G
Sbjct: 194 VGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADG 240
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 8/73 (10%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLSPKTPQASPKTVLAANTRSGIKKRRS 204
H I +RD+K +N++++ N + DF L+ K A +T + RR
Sbjct: 148 HKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS--------AGDTHGQVGTRRY 199
Query: 205 FLSKFCSSGISLE 217
+ I+ +
Sbjct: 200 MAPEVLEGAINFQ 212
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 249 EYVAPEIIEGKGHDFAVDWWSLGVVLHEML-YGATPFRGSSRKETF 293
+++APE + + + D WS GV++ E+ G +P+ G +E F
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 17/108 (15%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFV--------GYAIDYCPGRDLHSLRKQQSEQMFSD 127
E +V++ + H L +L V+S + G +D+ G LR Q M +
Sbjct: 56 EAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 115
Query: 128 DTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
M V+RDL+ NI++ EN + DF L+
Sbjct: 116 ---------IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 154
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 17/108 (15%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFV--------GYAIDYCPGRDLHSLRKQQSEQMFSD 127
E +V++ + H L +L V+S + G +D+ G LR Q M +
Sbjct: 53 EAQVMKKLRHEKLVQLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 112
Query: 128 DTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
M V+RDL+ NI++ EN + DF L+
Sbjct: 113 ---------IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 151
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPF 284
GT E++APE++ + + D +S GV+L E+ P+
Sbjct: 200 AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW 239
Score = 28.1 bits (61), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDLHSLRKQQSEQMFSDDTIRFXXX 135
E +++ + HP + G ++ + +Y L+ L + + D+ R
Sbjct: 84 EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMA 143
Query: 136 XXXXX---XXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDL-----STKLSPKTPQASP 187
N IV+R+LK N+++ + + + DF L ST LS K+ +P
Sbjct: 144 YDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTP 203
Query: 188 K 188
+
Sbjct: 204 E 204
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 17/108 (15%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFV--------GYAIDYCPGRDLHSLRKQQSEQMFSD 127
E +V++ + H L +L V+S + G +D+ G LR Q M +
Sbjct: 60 EAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQ 119
Query: 128 DTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
M V+RDL+ NI++ EN + DF L+
Sbjct: 120 ---------IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 158
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 17/108 (15%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFV--------GYAIDYCPGRDLHSLRKQQSEQMFSD 127
E +V++ + H L +L V+S + G +D+ G LR Q M +
Sbjct: 63 EAQVMKKIRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 128 DTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
M V+RDL+ NI++ EN + DF L+
Sbjct: 123 ---------IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 3/106 (2%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAID--YCPGRDLHSLRKQQSEQMFSDDTIRFX 133
E V+ + H L +L GV+ +K Y + G + LR + + D ++F
Sbjct: 55 EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 114
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
N V+RDL N+++ E+ + DF L+ + S
Sbjct: 115 LDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 159
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 17/108 (15%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFV--------GYAIDYCPGRDLHSLRKQQSEQMFSD 127
E +V++ + H L +L V+S + G +D+ G LR Q M +
Sbjct: 60 EAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQ 119
Query: 128 DTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
M V+RDL+ NI++ EN + DF L+
Sbjct: 120 ---------IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 158
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 3/106 (2%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAID--YCPGRDLHSLRKQQSEQMFSDDTIRFX 133
E V+ + H L +L GV+ +K Y + G + LR + + D ++F
Sbjct: 64 EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 123
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
N V+RDL N+++ E+ + DF L+ + S
Sbjct: 124 LDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 245 VGTEEYVAPEIIEGKGHDFAVDWWSLGVVLHEMLYGATPF 284
GT E++APE++ + + D +S GV+L E+ P+
Sbjct: 200 AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 17/108 (15%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--------HSLRKQQSEQMFSD 127
E +V+ N+ H L +L GV + + + +Y L H + QQ +M D
Sbjct: 69 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 128
Query: 128 DTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+ ++RDL N ++ + G + + DF LS
Sbjct: 129 ---------VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 17/108 (15%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--------HSLRKQQSEQMFSD 127
E +V+ N+ H L +L GV + + + +Y L H + QQ +M D
Sbjct: 69 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 128
Query: 128 DTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+ ++RDL N ++ + G + + DF LS
Sbjct: 129 ---------VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 60/140 (42%), Gaps = 9/140 (6%)
Query: 24 LGRGAKGVVFLVKDVESSESFALKVIWRDLIEKKSKELTNNDNGDKYRRISFEQRVLRNV 83
+G+G G+V + V+ A+K + E +++ + +K++ E ++ N+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI------EKFQEFQREVFIMSNL 80
Query: 84 EHPLLPRLRGVLSTDKFVGYAIDYCPGRDL-HSLRKQQSEQMFSDDTIRFXXXXXXXXXX 142
HP + +L G++ + +++ P DL H L + +S
Sbjct: 81 NHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM 138
Query: 143 XXHNMGIVYRDLKPENIMIQ 162
N IV+RDL+ NI +Q
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQ 158
Score = 28.1 bits (61), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 293 FYRILCRPPDLVGEPTPLRNLIRRLLEK-DPTK-----RIGVEEIKGHEFFKGVNWELLL 346
Y ++ PP +V E P +L RLL+K P K R+ ++ G E+ + N ++
Sbjct: 88 LYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVH 147
Query: 347 KISRPPNIPARFEHENNESDGRGRD-GTKEIDVEKFVQGIFA 387
+ R PNI + EN + D GT + V V G+
Sbjct: 148 RDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHS-VSGLLG 188
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 17/108 (15%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--------HSLRKQQSEQMFSD 127
E +V+ N+ H L +L GV + + + +Y L H + QQ +M D
Sbjct: 60 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 119
Query: 128 DTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+ ++RDL N ++ + G + + DF LS
Sbjct: 120 ---------VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 158
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 17/108 (15%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--------HSLRKQQSEQMFSD 127
E +V+ N+ H L +L GV + + + +Y L H + QQ +M D
Sbjct: 53 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 112
Query: 128 DTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+ ++RDL N ++ + G + + DF LS
Sbjct: 113 ---------VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 151
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 3/106 (2%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAID--YCPGRDLHSLRKQQSEQMFSDDTIRFX 133
E V+ + H L +L GV+ +K Y + G + LR + + D ++F
Sbjct: 49 EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 108
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
N V+RDL N+++ E+ + DF L+ + S
Sbjct: 109 LDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 153
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 17/108 (15%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--------HSLRKQQSEQMFSD 127
E +V+ N+ H L +L GV + + + +Y L H + QQ +M D
Sbjct: 54 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 113
Query: 128 DTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+ ++RDL N ++ + G + + DF LS
Sbjct: 114 ---------VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 152
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 3/106 (2%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAID--YCPGRDLHSLRKQQSEQMFSDDTIRFX 133
E V+ + H L +L GV+ +K Y + G + LR + + D ++F
Sbjct: 236 EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 295
Query: 134 XXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLSTKLS 179
N V+RDL N+++ E+ + DF L+ + S
Sbjct: 296 LDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 17/108 (15%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--------HSLRKQQSEQMFSD 127
E +V+ N+ H L +L GV + + + +Y L H + QQ +M D
Sbjct: 49 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 108
Query: 128 DTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+ ++RDL N ++ + G + + DF LS
Sbjct: 109 ---------VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 147
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTK 177
H I++RD+K NI++ EN + DF +S K
Sbjct: 156 HTRAIIHRDVKSINILLDENFVPKITDFGISKK 188
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 145 HNMGIVYRDLKPENIMIQENGHIMLVDFDLSTK 177
H I++RD+K NI++ EN + DF +S K
Sbjct: 156 HTRAIIHRDVKSINILLDENFVPKITDFGISKK 188
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 54/140 (38%), Gaps = 20/140 (14%)
Query: 52 DLIEKKSKELTNNDNGDKYRRISFEQRVLRNV-EHPLLPRLRGVLSTDKFVGYAIDYCP- 109
D K+ KE + D+ +R + E VL + HP + L G ++ AI+Y P
Sbjct: 51 DAAIKRMKEYASKDD---HRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 107
Query: 110 GRDLHSLRKQQ--------------SEQMFSDDTIRFXXXXXXXXXXXXHNMGIVYRDLK 155
G L LRK + + + S + F ++R+L
Sbjct: 108 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ-FIHRNLA 166
Query: 156 PENIMIQENGHIMLVDFDLS 175
NI++ EN + DF LS
Sbjct: 167 ARNILVGENYVAKIADFGLS 186
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 28.9 bits (63), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 17/108 (15%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFVGYAIDYCPGRDL--------HSLRKQQSEQMFSD 127
E +V+ N+ H L +L GV + + + +Y L H + QQ +M D
Sbjct: 54 EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKD 113
Query: 128 DTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
+ ++RDL N ++ + G + + DF LS
Sbjct: 114 ---------VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 152
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 17/108 (15%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFV--------GYAIDYCPGRDLHSLRKQQSEQMFSD 127
E +V++ + H L +L V+S + G +D+ G LR Q M +
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 128 DTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
M V+RDL+ NI++ EN + DF L+
Sbjct: 123 ---------IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 17/108 (15%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFV--------GYAIDYCPGRDLHSLRKQQSEQMFSD 127
E +V++ + H L +L V+S + G +D+ G LR Q M +
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 128 DTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
M V+RDL+ NI++ EN + DF L+
Sbjct: 123 ---------IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 17/108 (15%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFV--------GYAIDYCPGRDLHSLRKQQSEQMFSD 127
E +V++ + H L +L V+S + G +D+ G LR Q M +
Sbjct: 54 EAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 113
Query: 128 DTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
M V+RDL+ NI++ EN + DF L+
Sbjct: 114 ---------IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 152
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 17/108 (15%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFV--------GYAIDYCPGRDLHSLRKQQSEQMFSD 127
E +V++ + H L +L V+S + G +D+ G LR Q M +
Sbjct: 52 EAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 111
Query: 128 DTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
M V+RDL+ NI++ EN + DF L+
Sbjct: 112 ---------IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 150
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 17/108 (15%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFV--------GYAIDYCPGRDLHSLRKQQSEQMFSD 127
E +V++ + H L +L V+S + G +D+ G LR Q M +
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 128 DTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
M V+RDL+ NI++ EN + DF L+
Sbjct: 123 ---------IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 17/108 (15%)
Query: 76 EQRVLRNVEHPLLPRLRGVLSTDKFV--------GYAIDYCPGRDLHSLRKQQSEQMFSD 127
E +V++ + H L +L V+S + G +D+ G LR Q M +
Sbjct: 63 EAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 122
Query: 128 DTIRFXXXXXXXXXXXXHNMGIVYRDLKPENIMIQENGHIMLVDFDLS 175
M V+RDL+ NI++ EN + DF L+
Sbjct: 123 ---------IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 161
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.138 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,563,563
Number of Sequences: 62578
Number of extensions: 526076
Number of successful extensions: 4158
Number of sequences better than 100.0: 989
Number of HSP's better than 100.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 255
Number of HSP's that attempted gapping in prelim test: 1456
Number of HSP's gapped (non-prelim): 2062
length of query: 426
length of database: 14,973,337
effective HSP length: 102
effective length of query: 324
effective length of database: 8,590,381
effective search space: 2783283444
effective search space used: 2783283444
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)