BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014345
(426 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A4IF69|NHLC2_BOVIN NHL repeat-containing protein 2 OS=Bos taurus GN=NHLRC2 PE=2 SV=1
Length = 726
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 13/146 (8%)
Query: 30 PGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYS----GHVDGKPREARMNHPKG 85
P L + DS +S + +S L + LV G + + G VDG AR+ HP G
Sbjct: 422 PWSCLFVADSESSTVRTVS--LKDGAVKHLVGGERDPMNLFAFGDVDGVGINARLQHPLG 479
Query: 86 LTVDDRGN-IYIADTMNMAIRKI--SDSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDV 142
+T D + N +Y+AD+ N I+ + TT+AG G + D+ F N+
Sbjct: 480 VTWDQKRNLLYVADSYNHKIKVVDPKTKNCTTLAGT--GNASNMIGSSFTDSTF-NEPGG 536
Query: 143 VYIGSSCSLL-VIDRGNRAIREIQLH 167
+ IG + LL V D N I+ + L
Sbjct: 537 LCIGENGQLLYVADTNNHQIKVLDLE 562
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 11/82 (13%)
Query: 69 GHVDGKPREARMNHPKGLTVDDRGNIYIADTMNMAIRKISDSG--VTTIAG----GKWGR 122
G DG E+ N P+G+ + + IY+ADT N IRKI V+T+AG G
Sbjct: 267 GRKDGIFSESSFNSPQGVAIMNN-IIYVADTENHLIRKIDLEAEMVSTVAGIGIQGTDKE 325
Query: 123 GGGHVDGPSEDAKFSNDFDVVY 144
GG D + S+ +DVV+
Sbjct: 326 GGAKGD----EQPISSPWDVVF 343
>sp|Q9W6V6|TEN1_CHICK Teneurin-1 OS=Gallus gallus GN=TENM1 PE=1 SV=1
Length = 2705
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 24 YSVEVLPGGELLILDSANSN-LYRISSSL---SLYSRPKLVAGSAEGY----SGHVD--G 73
Y + V P E L L N+ +Y+ S + L +VAG+ + H G
Sbjct: 1219 YYLAVDPVSESLYLSDTNTRRVYKAKSLIETKDLAKNVDVVAGTGDQCLPFDQSHCGDGG 1278
Query: 74 KPREARMNHPKGLTVDDRGNIYIADTMNMAIRKISDSG-VTTIAG 117
K EA +N P+G+T+D G IY D IRKI ++G +TTI G
Sbjct: 1279 KASEASLNSPRGITIDKHGFIYFVD--GTMIRKIDENGMITTIIG 1321
>sp|Q5ZI67|NHLC2_CHICK NHL repeat-containing protein 2 OS=Gallus gallus GN=NHLRC2 PE=2
SV=1
Length = 727
Score = 41.2 bits (95), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 65/134 (48%), Gaps = 17/134 (12%)
Query: 23 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNH 82
P V V GE L++ A++ +RI +L + G SG DG+ EA N
Sbjct: 221 PGKVTVDKSGERLVI--ADTGHHRILVTLKNGQILHTIGGPN---SGRKDGRFSEAAFNS 275
Query: 83 PKGLTVDDRGNIYIADTMNMAIRKISDSG--VTTIAG----GKWGRGGGHVDGPSEDAKF 136
P+G+ + + IY+ADT N IRKI VTT+AG G GG E+
Sbjct: 276 PQGVAIKNN-VIYVADTENHLIRKIDLELEIVTTVAGIGIQGVDKEGGAK----GEEQPI 330
Query: 137 SNDFDVVYIGSSCS 150
S+ +DVV+ G+S S
Sbjct: 331 SSPWDVVF-GNSVS 343
Score = 35.0 bits (79), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 30 PGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYS----GHVDGKPREARMNHPKG 85
P L + DS +S + IS L + LV G + + G VDG A++ HP G
Sbjct: 417 PWNCLFVADSESSTVRMIS--LKDGAVKHLVGGERDPLNLFAFGDVDGAGINAKLQHPLG 474
Query: 86 LTVD-DRGNIYIADTMNMAIRKISD--SGVTTIAG 117
+T D R +Y+AD+ N I+ + T+AG
Sbjct: 475 ITWDKKRKLLYVADSYNHKIKVVDPKMKNCATLAG 509
>sp|Q9UKZ4|TEN1_HUMAN Teneurin-1 OS=Homo sapiens GN=TENM1 PE=1 SV=2
Length = 2725
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 13/128 (10%)
Query: 4 FESGYTVETVFDGSKLGIEPYSVEVLPGGELLILDSANS-NLYRISSSLS---LYSRPKL 59
F SG +V ++ + S Y + + P E L L N+ +Y++ S + L ++
Sbjct: 1220 FPSGNSV-SILELSTSPAHKYYLAMDPVSESLYLSDTNTRKVYKLKSLVETKDLSKNFEV 1278
Query: 60 VAGSAEGY----SGHVD--GKPREARMNHPKGLTVDDRGNIYIADTMNMAIRKISDSGVT 113
VAG+ + H G+ EA +N P+G+TVD G IY D IRKI ++ V
Sbjct: 1279 VAGTGDQCLPFDQSHCGDGGRASEASLNSPRGITVDRHGFIYFVD--GTMIRKIDENAVI 1336
Query: 114 TIAGGKWG 121
T G G
Sbjct: 1337 TTVIGSNG 1344
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 11/94 (11%)
Query: 25 SVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVD----------GK 74
++ V G L I ++ + RI ++ ++AG+ +D G
Sbjct: 1430 AISVSHSGLLFIAETDERKVNRIQQ-VTTNGEIYIIAGAPTDCDCKIDPNCDCFSGDGGY 1488
Query: 75 PREARMNHPKGLTVDDRGNIYIADTMNMAIRKIS 108
++A+M P L V G +Y+AD N+ IR IS
Sbjct: 1489 AKDAKMKAPSSLAVSPDGTLYVADLGNVRIRTIS 1522
>sp|Q03601|NHL1_CAEEL RING finger protein nhl-1 OS=Caenorhabditis elegans GN=nhl-1 PE=1
SV=2
Length = 974
Score = 40.0 bits (92), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 10/80 (12%)
Query: 83 PKGLTVDDRGNIYIADTMNMAIRKISDSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDV 142
P+G+ +D + N+ IAD+ N I+ G + G WG G G + G +
Sbjct: 903 PRGIAIDSQENLIIADSGNNRIQVFDAQGQFVSSFGTWGGGAGQLKG----------VED 952
Query: 143 VYIGSSCSLLVIDRGNRAIR 162
V + + S++V DR N I+
Sbjct: 953 VCVTADGSIVVTDRENHRIQ 972
Score = 39.3 bits (90), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 67 YSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNMAIRKISDSGVTTIAGGKWGRGGGH 126
+ GH G A+ N+P G+ VDD G+IY+AD N ++ +G G +G G
Sbjct: 795 FGGHGQGN---AKFNNPWGVAVDDLGSIYVADKDNHRVQVFDKNGQFIAKFGSFGHLPGQ 851
Query: 127 VDGP 130
++ P
Sbjct: 852 LNSP 855
>sp|Q6N022|TEN4_HUMAN Teneurin-4 OS=Homo sapiens GN=TENM4 PE=1 SV=2
Length = 2769
Score = 40.0 bits (92), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 32 GELLILDSANSNLYRISSSL---SLYSRPKLVAGSAEGYSGHVD------GKPREARMNH 82
G + + DS + +++I S++ L ++VAG+ + D GK EA + +
Sbjct: 1290 GAVFLSDSNSRRVFKIKSTVVVKDLVKNSEVVAGTGDQCLPFDDTRCGDGGKATEATLTN 1349
Query: 83 PKGLTVDDRGNIYIADTMNMAIRKISDSGVTTIAGG 118
P+G+TVD G IY D IR+I +G+ + G
Sbjct: 1350 PRGITVDKFGLIYFVD--GTMIRRIDQNGIISTLLG 1383
Score = 35.0 bits (79), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 13/94 (13%)
Query: 25 SVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEG-----------YSGHVDG 73
++ V G L I ++ + RI ++ LVAG+ G +SG DG
Sbjct: 1472 ALAVSHNGVLYIAETDEKKINRIRQ-VTTSGEISLVAGAPSGCDCKNDANCDCFSGD-DG 1529
Query: 74 KPREARMNHPKGLTVDDRGNIYIADTMNMAIRKI 107
++A++N P L V G +Y+AD N+ IR I
Sbjct: 1530 YAKDAKLNTPSSLAVCADGELYVADLGNIRIRFI 1563
>sp|Q9WTS4|TEN1_MOUSE Teneurin-1 OS=Mus musculus GN=Tenm1 PE=1 SV=1
Length = 2731
Score = 40.0 bits (92), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Query: 24 YSVEVLPGGELLILDSANS-NLYRISSSLS---LYSRPKLVAGSAEGY----SGHVD--G 73
Y + + P E L L N+ +Y++ S + L ++VAG+ + H G
Sbjct: 1245 YYLAMDPMSESLYLSDTNTRKVYKLKSLVETKDLSKNFEVVAGTGDQCLPFDQSHCGDGG 1304
Query: 74 KPREARMNHPKGLTVDDRGNIYIADTMNMAIRKISDSGVTTIAGGKWG 121
K EA +N P+G+TVD G IY D IR+I ++ V T G G
Sbjct: 1305 KASEASLNSPRGITVDRHGFIYFVD--GTMIRRIDENAVITTVIGSNG 1350
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 11/94 (11%)
Query: 25 SVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVD----------GK 74
++ V G L I ++ + RI ++ ++AG+ +D G
Sbjct: 1436 AISVSHSGLLFIAETDERKVNRIQQ-VTTNGEISIIAGAPTDCDCKIDPNCDCFSGDGGY 1494
Query: 75 PREARMNHPKGLTVDDRGNIYIADTMNMAIRKIS 108
++A+M P L V G +Y+AD N+ IR IS
Sbjct: 1495 AKDAKMKAPSSLAVSPDGTLYVADLGNVRIRTIS 1528
>sp|Q8BZW8|NHLC2_MOUSE NHL repeat-containing protein 2 OS=Mus musculus GN=Nhlrc2 PE=2 SV=1
Length = 725
Score = 39.7 bits (91), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 16/146 (10%)
Query: 30 PGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYS----GHVDGKPREARMNHPKG 85
P L + DS +S + +S L + LV G + + G VDG A++ HP G
Sbjct: 422 PWSCLFVADSESSTVRTVS--LRDGAVKHLVGGERDPMNLFAFGDVDGAGINAKLQHPLG 479
Query: 86 LTVD-DRGNIYIADTMNMAIRKI--SDSGVTTIAGGKWGRGGGHVDGPSEDAKFS-NDFD 141
+ D +R +Y+AD+ N I+ + G TT+AG G D S A+ + N+
Sbjct: 480 VAWDEERQVLYVADSYNHKIKVVDPKTKGCTTLAG-----TGDASDASSSFAESAFNEPG 534
Query: 142 VVYIGSSCSLL-VIDRGNRAIREIQL 166
+ IG S LL V D N I+ + L
Sbjct: 535 GLCIGESGRLLYVADTNNHQIKVMDL 560
Score = 38.1 bits (87), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 69 GHVDGKPREARMNHPKGLTVDDRGNIYIADTMNMAIRKISDSG--VTTIAGGKWGRGGGH 126
G DG E+ N P+G+ + D IY+ADT N IRKI VTT+AG G G
Sbjct: 267 GRKDGMFSESSFNSPQGVAIADN-VIYVADTENHLIRKIDLEAEKVTTVAGV--GIQGTD 323
Query: 127 VDGPSEDAK--FSNDFDVVYIGSSCS 150
+G E K S+ +DV +G+S S
Sbjct: 324 TEGGEEGDKQPISSPWDVA-LGTSGS 348
>sp|Q9P273|TEN3_HUMAN Teneurin-3 OS=Homo sapiens GN=TENM3 PE=2 SV=3
Length = 2699
Score = 38.9 bits (89), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 13/97 (13%)
Query: 32 GELLILDSANSNLYR---ISSSLSLYSRPKLVAGSAE-------GYSGHVDGKPREARMN 81
G+L + D+ +YR ++ + L ++VAG+ E G GK EA +
Sbjct: 1226 GDLYVSDTNTRRIYRPKSLTGAKDLTKNAEVVAGTGEQCLPFDEARCGD-GGKAVEATLM 1284
Query: 82 HPKGLTVDDRGNIYIADTMNMAIRKISDSGVTTIAGG 118
PKG+ VD G IY D IRK+ +G+ + G
Sbjct: 1285 SPKGMAVDKNGLIYFVD--GTMIRKVDQNGIISTLLG 1319
>sp|Q9WTS6|TEN3_MOUSE Teneurin-3 OS=Mus musculus GN=Tenm3 PE=1 SV=1
Length = 2715
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Query: 32 GELLILDSANSNLYR---ISSSLSLYSRPKLVAGSAEGYSGHVD------GKPREARMNH 82
G+L + D+ +YR ++ + L ++VAG+ E + GK EA +
Sbjct: 1242 GDLYVSDTNTRRIYRPKSLTGAKDLTKNAEVVAGTGEQCLPFDEARCGDGGKAVEATLMS 1301
Query: 83 PKGLTVDDRGNIYIADTMNMAIRKISDSGVTTIAGG 118
PKG+ +D G IY D IRK+ +G+ + G
Sbjct: 1302 PKGMAIDKNGLIYFVD--GTMIRKVDQNGIISTLLG 1335
Score = 35.4 bits (80), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 72 DGKPREARMNHPKGLTVDDRGNIYIADTMNMAIRKIS 108
DG ++A++N P L G +YIAD N+ IR +S
Sbjct: 1479 DGYAKDAKLNAPSSLAASPDGTLYIADLGNIRIRAVS 1515
>sp|Q8NBF2|NHLC2_HUMAN NHL repeat-containing protein 2 OS=Homo sapiens GN=NHLRC2 PE=1 SV=1
Length = 726
Score = 37.7 bits (86), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 30 PGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYS----GHVDGKPREARMNHPKG 85
P L + DS +S + +S L + LV G + + G VDG A++ HP G
Sbjct: 422 PWSCLFVADSESSTVRTVS--LKDGAVKHLVGGERDPMNLFAFGDVDGVGINAKLQHPLG 479
Query: 86 LTVDDRGN-IYIADTMNMAIRKI--SDSGVTTIAG 117
+T D + N +Y+AD+ N I+ + TT+AG
Sbjct: 480 VTWDKKRNLLYVADSYNHKIKVVDPKTKNCTTLAG 514
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Query: 69 GHVDGKPREARMNHPKGLTVDDRGNIYIADTMNMAIRKISDSG--VTTIAG----GKWGR 122
G DG E+ N P+G+ + + IY+ADT N IRKI V+T+AG G
Sbjct: 267 GRKDGIFSESTFNSPQGVAIMNN-IIYVADTENHLIRKIDLEAEKVSTVAGIGIQGTDKE 325
Query: 123 GGGHVDGPSEDAKFSNDFDVVY 144
GG E S+ +DVV+
Sbjct: 326 GGAK----GEQQPISSPWDVVF 343
>sp|Q9W7R4|TEN3_DANRE Teneurin-3 OS=Danio rerio GN=tenm3 PE=2 SV=1
Length = 2590
Score = 37.4 bits (85), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 72 DGKPREARMNHPKGLTVDDRGNIYIADTMNMAIRKI 107
DG ++AR+N P L V G +Y+AD N+ IR I
Sbjct: 1353 DGYAKDARLNAPSSLVVSPDGTLYVADLGNIRIRAI 1388
Score = 37.0 bits (84), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 11/96 (11%)
Query: 32 GELLILDSANSNLYR---ISSSLSLYSRPKLVAGSAEGYSGHVD------GKPREARMNH 82
G+L + D+ + ++R ++ + L ++VAG+ E + GK EA +
Sbjct: 1116 GQLYVSDTNSRRIFRPKALTGTKELLQNAEVVAGTGEQCLPFDEARCGDGGKATEALLLG 1175
Query: 83 PKGLTVDDRGNIYIADTMNMAIRKISDSGVTTIAGG 118
PKG+ VD G IY D IRK+ +G+ + G
Sbjct: 1176 PKGIAVDKNGFIYFVD--GTMIRKVDRNGIISTLLG 1209
>sp|Q3UHK6|TEN4_MOUSE Teneurin-4 OS=Mus musculus GN=Tenm4 PE=1 SV=2
Length = 2771
Score = 37.4 bits (85), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 11/96 (11%)
Query: 32 GELLILDSANSNLYRISSSL---SLYSRPKLVAGSAEGYSGHVD------GKPREARMNH 82
G + + D+ + ++++ S+ L ++VAG+ + D GK EA + +
Sbjct: 1292 GAVFLSDTNSRRVFKVKSTTVVKDLVKNSEVVAGTGDQCLPFDDTRCGDGGKATEATLTN 1351
Query: 83 PKGLTVDDRGNIYIADTMNMAIRKISDSGVTTIAGG 118
P+G+TVD G IY D IR++ +G+ + G
Sbjct: 1352 PRGITVDKFGLIYFVD--GTMIRRVDQNGIISTLLG 1385
Score = 35.0 bits (79), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 13/94 (13%)
Query: 25 SVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEG-----------YSGHVDG 73
++ V G L I ++ + RI ++ LVAG+ G +SG DG
Sbjct: 1474 ALAVSHNGVLYIAETDEKKINRIRQ-VTTSGEISLVAGAPSGCDCKNDANCDCFSGD-DG 1531
Query: 74 KPREARMNHPKGLTVDDRGNIYIADTMNMAIRKI 107
++A++N P L V G +Y+AD N+ IR I
Sbjct: 1532 YAKDAKLNTPSSLAVCADGELYVADLGNIRIRFI 1565
>sp|Q9V4M2|WECH_DROME Protein wech OS=Drosophila melanogaster GN=wech PE=1 SV=2
Length = 832
Score = 37.0 bits (84), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 41/103 (39%), Gaps = 15/103 (14%)
Query: 5 ESGYTVETVFD--GSKLGI-EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVA 61
E + + VFD G GI P V P G +++ D N LY I ++ L
Sbjct: 674 EGRFIRQIVFDNHGQTKGIASPRGVCYTPTGNIIVSDFDNHCLYLIDPDIN----DILSV 729
Query: 62 GSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNMAI 104
EG H N P GL DD G I +AD+ N I
Sbjct: 730 KGHEGSGFH--------EFNRPSGLCCDDEGRIIVADSKNQRI 764
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 7/138 (5%)
Query: 83 PKGLTVDDRGNIYIADTMNMAIRKISDSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDV 142
P G+ VD I + D N ++ + SGV + G +G+ G P + A S V
Sbjct: 600 PAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQIV 659
Query: 143 VYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQYGSSFPLGIAV-----LLAAGFFGYMLA 197
V + + D R IR Q+ FD+ G + P G+ ++ + F + L
Sbjct: 660 VTDSRNHRIQQFDSEGRFIR--QIVFDNHGQTKGIASPRGVCYTPTGNIIVSDFDNHCLY 717
Query: 198 LLQRRVGTIVSSQNDHGT 215
L+ + I+S + G+
Sbjct: 718 LIDPDINDILSVKGHEGS 735
>sp|Q2Q1W2|LIN41_HUMAN E3 ubiquitin-protein ligase TRIM71 OS=Homo sapiens GN=TRIM71 PE=1
SV=1
Length = 868
Score = 36.6 bits (83), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
Query: 83 PKGLTVDDRGNIYIADTMNMAIRKISDSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDV 142
P+G+ VD G I +AD+ N ++ +G G G G G +D PS
Sbjct: 797 PQGVAVDQEGRIIVADSRNHRVQMFESNGSFLCKFGAQGSGFGQMDRPSG---------- 846
Query: 143 VYIGSSCSLLVIDRGNRAI 161
+ I ++V+D GN I
Sbjct: 847 IAITPDGMIVVVDFGNNRI 865
>sp|Q9W7R3|TEN4_DANRE Teneurin-4 OS=Danio rerio GN=tenm4 PE=2 SV=1
Length = 2824
Score = 36.6 bits (83), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 13/125 (10%)
Query: 4 FESGYTVETVFDGSKLGIEPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPK---L 59
F +G V +V + S Y + P G L + D+++ ++++ S ++ K L
Sbjct: 1317 FTTG-NVTSVLELSNSPAHKYYLATSPVSGWLYLSDTSSRKVFKVKSLYAVKDVAKNLEL 1375
Query: 60 VAGSAEGYSGHVD------GKPREARMNHPKGLTVDDRGNIYIADTMNMAIRKISDSGVT 113
VAG+ + + + GK EA + +P+G+TVD G I+ D IR+I +G+
Sbjct: 1376 VAGTGDQCLPYDETRCGDGGKAVEATLTNPRGITVDKYGVIFFVD--GTMIRRIDQNGII 1433
Query: 114 TIAGG 118
+ G
Sbjct: 1434 STLLG 1438
Score = 35.8 bits (81), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 13/94 (13%)
Query: 25 SVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEG-----------YSGHVDG 73
++ V G L I +S + R+ +S L+AG+ G YSG DG
Sbjct: 1527 ALAVSHNGLLYIAESDEKKINRVRQ-VSTNGEISLLAGAPSGCDCKNDANCDCYSGD-DG 1584
Query: 74 KPREARMNHPKGLTVDDRGNIYIADTMNMAIRKI 107
++A++N P L V G ++IAD N+ IR +
Sbjct: 1585 YAKDAKLNAPSSLAVSPDGELFIADLGNIRIRYV 1618
>sp|Q9DER5|TEN2_CHICK Teneurin-2 OS=Gallus gallus GN=TENM2 PE=1 SV=1
Length = 2802
Score = 36.2 bits (82), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 63 SAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNMAIRKIS 108
+ YSG DG +A +N P L V G IYIAD N+ IR +S
Sbjct: 1555 NCNCYSGD-DGYATDAILNSPSSLAVAPDGTIYIADLGNIRIRAVS 1599
>sp|E1BJS7|LIN41_BOVIN E3 ubiquitin-protein ligase TRIM71 OS=Bos taurus GN=TRIM71 PE=3
SV=2
Length = 868
Score = 35.8 bits (81), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
Query: 83 PKGLTVDDRGNIYIADTMNMAIRKISDSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDV 142
P+G+ VD G I +AD+ N ++ +G G G G G +D PS A +
Sbjct: 797 PQGVAVDQEGRIIVADSRNHRVQMFESNGSFLCKFGAQGSGFGQMDRPSGIAVTPDGM-- 854
Query: 143 VYIGSSCSLLVIDRGNRAI 161
++V+D GN I
Sbjct: 855 --------IVVVDFGNNRI 865
>sp|Q1PSW8|LIN41_MOUSE E3 ubiquitin-protein ligase TRIM71 OS=Mus musculus GN=Trim71 PE=1
SV=1
Length = 855
Score = 35.8 bits (81), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
Query: 83 PKGLTVDDRGNIYIADTMNMAIRKISDSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDV 142
P+G+ VD G I +AD+ N ++ +G G G G G +D PS A +
Sbjct: 784 PQGVAVDQEGRIIVADSRNHRVQMFEANGSFLCKFGAQGSGFGQMDRPSGIAVTPDGL-- 841
Query: 143 VYIGSSCSLLVIDRGNRAI 161
++V+D GN I
Sbjct: 842 --------IVVVDFGNNRI 852
>sp|F6QEU4|LIN41_XENTR E3 ubiquitin-protein ligase TRIM71 OS=Xenopus tropicalis GN=trim71
PE=3 SV=1
Length = 814
Score = 35.4 bits (80), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 10/79 (12%)
Query: 83 PKGLTVDDRGNIYIADTMNMAIRKISDSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDV 142
P+G+ VD G I +AD+ N ++ +G G G G G +D PS
Sbjct: 743 PQGVAVDQEGRIIVADSRNHRVQIFEPNGSFLCKFGTQGSGFGQMDRPSG---------- 792
Query: 143 VYIGSSCSLLVIDRGNRAI 161
+ + +++V+D GN I
Sbjct: 793 IAVTPDGTIVVVDFGNNRI 811
>sp|Q1PRL4|LIN41_CHICK E3 ubiquitin-protein ligase TRIM71 OS=Gallus gallus GN=TRIM71 PE=2
SV=1
Length = 876
Score = 35.4 bits (80), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
Query: 83 PKGLTVDDRGNIYIADTMNMAIRKISDSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDV 142
P+G+ VD G I +AD+ N ++ +G G G G G +D PS
Sbjct: 805 PQGVAVDQEGRIIVADSRNHRVQIFESNGSFLCKFGAQGSGFGQMDRPSG---------- 854
Query: 143 VYIGSSCSLLVIDRGNRAI 161
+ + ++V+D GN I
Sbjct: 855 IAVTPDGMIVVVDFGNNRI 873
>sp|D3ZVM4|LIN41_RAT E3 ubiquitin-protein ligase TRIM71 OS=Rattus norvegicus GN=Trim71
PE=3 SV=1
Length = 855
Score = 35.4 bits (80), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 83 PKGLTVDDRGNIYIADTMNMAIRKISDSGVTTIAGGKWGRGGGHVDGPS 131
P+G+ VD G I +AD+ N ++ +G G G G G +D PS
Sbjct: 784 PQGVAVDQEGRIIVADSRNHRVQMFEANGSFLCKFGAQGSGFGQMDRPS 832
>sp|P34611|NCL1_CAEEL B-box type zinc finger protein ncl-1 OS=Caenorhabditis elegans
GN=ncl-1 PE=1 SV=1
Length = 851
Score = 35.4 bits (80), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 11/131 (8%)
Query: 14 FDGSKLGIEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDG 73
+D LG+EP +L GG + + L+ S S R K++ G G ++G
Sbjct: 529 YDKWSLGVEPSVGGLLEGGN--VDEEKFQTLF--PPSRSQIKRQKMIYHCKFGEFGVMEG 584
Query: 74 KPREARMNHPKGLTVDDRGNIYIADTMNMAIRKISDSGVTTIAGGKWGRGGGHVDGPSED 133
+ E P G+ V+ +G+I +ADT N I+ G G+ G+ G + P+
Sbjct: 585 QFTE-----PSGVAVNGQGDIVVADTNNHRIQVFDKEGRFKFQFGECGKRDGQLLYPNRV 639
Query: 134 A--KFSNDFDV 142
A + + DF V
Sbjct: 640 AVNRTTGDFVV 650
>sp|E7FAM5|LIN41_DANRE E3 ubiquitin-protein ligase TRIM71 OS=Danio rerio GN=trim71 PE=2
SV=1
Length = 824
Score = 33.9 bits (76), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 42/109 (38%), Gaps = 13/109 (11%)
Query: 23 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNH 82
P V G L++ D N L I RP + G G +G+
Sbjct: 706 PRGVAFNQEGHLVVTDFNNHRLLVI--------RPDCQSARFLGSEGTGNGQ-----FLR 752
Query: 83 PKGLTVDDRGNIYIADTMNMAIRKISDSGVTTIAGGKWGRGGGHVDGPS 131
P+G+ VD I +AD+ N I+ +G G G G G +D PS
Sbjct: 753 PQGVAVDQEDRIIVADSRNHRIQVFEPNGNFLCKFGTHGNGFGQMDRPS 801
>sp|G5EGQ6|TEN1_CAEEL Teneurin-1 OS=Caenorhabditis elegans GN=ten-1 PE=1 SV=1
Length = 2684
Score = 33.9 bits (76), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 23/32 (71%)
Query: 23 PYSVEVLPGGELLILDSANSNLYRISSSLSLY 54
PY+V V P G+++I DS NS + ++S+ ++ Y
Sbjct: 1486 PYAVCVSPSGDVIIADSGNSKIKKVSARMAKY 1517
>sp|Q9NT68|TEN2_HUMAN Teneurin-2 OS=Homo sapiens GN=TENM2 PE=1 SV=3
Length = 2774
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 63 SAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNMAIRKIS 108
+ YSG D +A +N P L V G IYIAD N+ IR +S
Sbjct: 1527 NCNCYSGD-DAYATDAILNSPSSLAVAPDGTIYIADLGNIRIRAVS 1571
>sp|Q9WTS5|TEN2_MOUSE Teneurin-2 OS=Mus musculus GN=Tenm2 PE=2 SV=1
Length = 2764
Score = 33.5 bits (75), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 67 YSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNMAIRKIS 108
YSG D +A +N P L V G IYIAD N+ IR +S
Sbjct: 1521 YSGD-DAYATDAILNSPSSLAVAPDGTIYIADLGNIRIRAVS 1561
>sp|Q9R1K2|TEN2_RAT Teneurin-2 OS=Rattus norvegicus GN=Tenm2 PE=1 SV=2
Length = 2774
Score = 33.5 bits (75), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 67 YSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNMAIRKIS 108
YSG D +A +N P L V G IYIAD N+ IR +S
Sbjct: 1531 YSGD-DAYATDAILNSPSSLAVAPDGTIYIADLGNIRIRAVS 1571
>sp|B0TLJ2|EX7L_SHEHH Exodeoxyribonuclease 7 large subunit OS=Shewanella halifaxensis
(strain HAW-EB4) GN=xseA PE=3 SV=1
Length = 445
Score = 33.5 bits (75), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 5/94 (5%)
Query: 314 DTRTPTPRKTYAFMSKDAEK-----IHQLRQSRAFYSGWDGDFQQQKQQHHHRYQSSTPN 368
D R PTP +SKDA+ + QL + + + + Q Q Q HR Q P
Sbjct: 249 DLRAPTPSAGAELLSKDADNKAQKLLSQLSRLKQSWQHYQLKKQNQLQACEHRLQKQDPQ 308
Query: 369 TYYEQSSEKTNEIVFGAIQEQGAKREAVVIKPVN 402
+ + +E+ Q K A +K N
Sbjct: 309 RRLQMYEQSFDEMQLRLQQAMQTKLHAYTLKQQN 342
>sp|Q9VYN8|TENA_DROME Teneurin-a OS=Drosophila melanogaster GN=Ten-a PE=1 SV=2
Length = 3004
Score = 33.1 bits (74), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 65 EGYSGHVDGKPRE-ARMNHPKGLTVDDRGNIYIADTMNMAIRKISDSGV 112
EG G DG P AR++HPKGL + +YIAD N IR + GV
Sbjct: 1345 EGNCG--DGGPALLARLSHPKGLAIAADRTMYIADGTN--IRAVDPKGV 1389
>sp|O05871|PKND_MYCTU Serine/threonine-protein kinase PknD OS=Mycobacterium tuberculosis
GN=pknD PE=1 SV=1
Length = 664
Score = 33.1 bits (74), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 80 MNHPKGLTVDDRGNIYIADTMNMAIRKI 107
+N P G+ VD+ GN+Y+ DT N + K+
Sbjct: 551 LNDPDGVAVDNSGNVYVTDTDNNRVVKL 578
Score = 32.7 bits (73), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 80 MNHPKGLTVDDRGNIYIADTMNMAIRKIS 108
+N+P+GL VD +G +Y+AD N + K++
Sbjct: 509 LNYPEGLAVDTQGAVYVADRGNNRVVKLA 537
>sp|A8H252|EX7L_SHEPA Exodeoxyribonuclease 7 large subunit OS=Shewanella pealeana (strain
ATCC 700345 / ANG-SQ1) GN=xseA PE=3 SV=1
Length = 445
Score = 32.7 bits (73), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 5/94 (5%)
Query: 314 DTRTPTPRKTYAFMSKDAEK-----IHQLRQSRAFYSGWDGDFQQQKQQHHHRYQSSTPN 368
D R PTP +SKDA+ + QL + + + + Q Q Q HR Q P
Sbjct: 249 DLRAPTPSAGAELLSKDADNKAQKLLSQLSRLKQAWQHYQLKKQSQVQTIEHRLQKQDPQ 308
Query: 369 TYYEQSSEKTNEIVFGAIQEQGAKREAVVIKPVN 402
+ + +E+ Q K A +K N
Sbjct: 309 RRLQMYEQSFDEMQLRLQQAMQTKLHAYALKQQN 342
>sp|O61307|TENM_DROME Teneurin-m OS=Drosophila melanogaster GN=Ten-m PE=1 SV=2
Length = 2731
Score = 32.7 bits (73), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 14/97 (14%)
Query: 32 GELLILDSANSNLYRISSSLSLYSRPKL----VAGSAE----GYSGHV-DGK-PREARMN 81
G L + D + + R+ + + YS+P+L V GS E G H DG ++A++
Sbjct: 1228 GTLYVSDPESHQIIRVRDT-NDYSQPELNWEAVVGSGERCLPGDEAHCGDGALAKDAKLA 1286
Query: 82 HPKGLTVDDRGNIYIADTMNMAIRKISDSG-VTTIAG 117
+PKG+ + +Y AD N IR + G V+T+ G
Sbjct: 1287 YPKGIAISSDNILYFADGTN--IRMVDRDGIVSTLIG 1321
>sp|Q9U489|LIN41_CAEEL Protein lin-41 OS=Caenorhabditis elegans GN=lin-41 PE=2 SV=1
Length = 1147
Score = 32.7 bits (73), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 13/110 (11%)
Query: 21 IEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARM 80
P+ + V G +++ D +N+ + + S+ G SG+ R +
Sbjct: 846 CRPWGICVDQRGRVIVADRSNNRVQIFDKDGNFISK--------FGTSGN-----RPGQF 892
Query: 81 NHPKGLTVDDRGNIYIADTMNMAIRKISDSGVTTIAGGKWGRGGGHVDGP 130
+ P G+T + NI +AD N ++ ++G+ + G GR G+ + P
Sbjct: 893 DRPAGITTNSLNNIVVADKDNHRVQVFDENGMFLLKFGDRGRAVGYFNYP 942
>sp|D2GXS7|TRIM2_AILME Tripartite motif-containing protein 2 OS=Ailuropoda melanoleuca
GN=TRIM2 PE=3 SV=1
Length = 744
Score = 32.3 bits (72), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 44/121 (36%), Gaps = 18/121 (14%)
Query: 23 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNH 82
P V V P G+++I D N + SS G K ++
Sbjct: 536 PTGVAVHPSGDIIIADYDNKWVSIFSSD------------------GKFKTKIGSGKLMG 577
Query: 83 PKGLTVDDRGNIYIADTMNMAIRKISDSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDV 142
PKG++VD G+I + D + +G G G G GP A SN+ +
Sbjct: 578 PKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEII 637
Query: 143 V 143
V
Sbjct: 638 V 638
>sp|A4IF63|TRIM2_BOVIN Tripartite motif-containing protein 2 OS=Bos taurus GN=TRIM2 PE=2
SV=1
Length = 744
Score = 32.3 bits (72), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 44/121 (36%), Gaps = 18/121 (14%)
Query: 23 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNH 82
P V V P G+++I D N + SS G K ++
Sbjct: 536 PTGVAVHPSGDIIIADYDNKWVSIFSSD------------------GKFKTKIGSGKLMG 577
Query: 83 PKGLTVDDRGNIYIADTMNMAIRKISDSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDV 142
PKG++VD G+I + D + +G G G G GP A SN+ +
Sbjct: 578 PKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEII 637
Query: 143 V 143
V
Sbjct: 638 V 638
>sp|Q9C040|TRIM2_HUMAN Tripartite motif-containing protein 2 OS=Homo sapiens GN=TRIM2 PE=1
SV=1
Length = 744
Score = 32.0 bits (71), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 42/117 (35%), Gaps = 18/117 (15%)
Query: 23 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNH 82
P V V P G+++I D N + SS G K ++
Sbjct: 536 PTGVAVHPSGDIIIADYDNKWVSIFSSD------------------GKFKTKIGSGKLMG 577
Query: 83 PKGLTVDDRGNIYIADTMNMAIRKISDSGVTTIAGGKWGRGGGHVDGPSEDAKFSND 139
PKG++VD G+I + D + +G G G G GP A SN+
Sbjct: 578 PKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNN 634
>sp|F7H9X2|TRIM2_CALJA Tripartite motif-containing protein 2 OS=Callithrix jacchus
GN=TRIM2 PE=3 SV=1
Length = 744
Score = 32.0 bits (71), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 42/117 (35%), Gaps = 18/117 (15%)
Query: 23 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNH 82
P V V P G+++I D N + SS G K ++
Sbjct: 536 PTGVAVHPSGDIIIADYDNKWVSIFSSD------------------GKFKTKIGSGKLMG 577
Query: 83 PKGLTVDDRGNIYIADTMNMAIRKISDSGVTTIAGGKWGRGGGHVDGPSEDAKFSND 139
PKG++VD G+I + D + +G G G G GP A SN+
Sbjct: 578 PKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNN 634
>sp|Q9ESN6|TRIM2_MOUSE Tripartite motif-containing protein 2 OS=Mus musculus GN=Trim2 PE=1
SV=1
Length = 744
Score = 32.0 bits (71), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 44/117 (37%), Gaps = 18/117 (15%)
Query: 23 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNH 82
P V V P G+++I D N +S++S G K ++
Sbjct: 536 PTGVAVHPSGDIIIADYDNK-------WVSIFSN-----------DGKFKTKIGSGKLMG 577
Query: 83 PKGLTVDDRGNIYIADTMNMAIRKISDSGVTTIAGGKWGRGGGHVDGPSEDAKFSND 139
PKG++VD G+I + D + +G G G G GP A SN+
Sbjct: 578 PKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNN 634
>sp|D3ZQG6|TRIM2_RAT Tripartite motif-containing protein 2 OS=Rattus norvegicus GN=Trim2
PE=1 SV=2
Length = 744
Score = 32.0 bits (71), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 62/170 (36%), Gaps = 35/170 (20%)
Query: 23 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNH 82
P V V P G+++I D N +S++S G K ++
Sbjct: 536 PTGVAVHPSGDIIIADYDNK-------WVSIFSN-----------DGKFKTKIGSGKLMG 577
Query: 83 PKGLTVDDRGNIYIADTMNMAIRKISDSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDV 142
PKG++VD G+I + D + +G G G G GP A
Sbjct: 578 PKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAA-------- 629
Query: 143 VYIGSSCSLLVIDRGNRAIR------EIQLHFDDCAYQYGS-SFPLGIAV 185
+ SS +++ D N +++ E L F G + P G+AV
Sbjct: 630 --VNSSNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAV 677
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.133 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 166,324,810
Number of Sequences: 539616
Number of extensions: 7216276
Number of successful extensions: 17358
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 17204
Number of HSP's gapped (non-prelim): 173
length of query: 426
length of database: 191,569,459
effective HSP length: 120
effective length of query: 306
effective length of database: 126,815,539
effective search space: 38805554934
effective search space used: 38805554934
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)