Query 014345
Match_columns 426
No_of_seqs 203 out of 1681
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 09:53:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014345.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014345hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kya_A Putative phosphatase; s 99.9 5.7E-22 1.9E-26 208.4 16.5 149 22-172 311-479 (496)
2 4hw6_A Hypothetical protein, I 99.8 3.4E-20 1.1E-24 190.7 19.0 144 22-167 274-432 (433)
3 3hrp_A Uncharacterized protein 99.8 9E-19 3.1E-23 177.9 19.2 138 22-167 267-409 (409)
4 3tc9_A Hypothetical hydrolase; 99.8 3.1E-19 1.1E-23 183.0 15.8 144 21-167 270-429 (430)
5 3fvz_A Peptidyl-glycine alpha- 99.6 1.4E-14 4.7E-19 140.7 22.3 136 18-168 88-227 (329)
6 3kya_A Putative phosphatase; s 99.6 3.5E-15 1.2E-19 156.9 16.1 132 21-168 247-410 (496)
7 4hw6_A Hypothetical protein, I 99.6 6.4E-15 2.2E-19 151.4 16.9 129 21-168 228-374 (433)
8 3tc9_A Hypothetical hydrolase; 99.6 6.4E-15 2.2E-19 151.0 16.8 147 21-187 226-408 (430)
9 3hrp_A Uncharacterized protein 99.6 4.3E-14 1.5E-18 143.4 20.8 152 20-188 218-390 (409)
10 3fvz_A Peptidyl-glycine alpha- 99.6 9.9E-14 3.4E-18 134.7 19.0 143 20-188 23-206 (329)
11 3v64_C Agrin; beta propeller, 99.5 4.2E-13 1.4E-17 133.4 18.9 132 22-186 117-254 (349)
12 1ijq_A LDL receptor, low-densi 99.5 9.8E-13 3.3E-17 128.5 19.0 134 21-187 77-218 (316)
13 3v65_B Low-density lipoprotein 99.5 6E-13 2E-17 134.0 17.8 132 22-187 160-298 (386)
14 1q7f_A NHL, brain tumor CG1071 99.5 3.7E-12 1.3E-16 119.2 21.5 134 21-187 121-260 (286)
15 3p5b_L Low density lipoprotein 99.5 8.2E-13 2.8E-17 133.9 18.3 133 22-188 160-301 (400)
16 3v64_C Agrin; beta propeller, 99.5 2.6E-12 9E-17 127.6 20.6 145 7-188 62-213 (349)
17 3sov_A LRP-6, low-density lipo 99.5 1.1E-12 3.9E-17 129.2 17.6 132 22-187 80-218 (318)
18 1npe_A Nidogen, entactin; glyc 99.5 2.9E-12 9.8E-17 120.3 18.6 132 21-186 79-217 (267)
19 3sov_A LRP-6, low-density lipo 99.5 2.8E-12 9.4E-17 126.5 19.0 130 21-186 122-258 (318)
20 3v65_B Low-density lipoprotein 99.4 3.5E-12 1.2E-16 128.4 19.9 133 22-188 117-256 (386)
21 1rwi_B Serine/threonine-protei 99.4 3.8E-12 1.3E-16 117.3 18.6 133 21-188 67-202 (270)
22 1ijq_A LDL receptor, low-densi 99.4 3.4E-12 1.2E-16 124.6 18.8 132 21-186 120-258 (316)
23 3m0c_C LDL receptor, low-densi 99.4 3.1E-12 1.1E-16 141.2 19.0 132 21-186 471-611 (791)
24 3s94_A LRP-6, low-density lipo 99.4 4.3E-12 1.5E-16 136.2 19.6 133 22-188 393-532 (619)
25 1npe_A Nidogen, entactin; glyc 99.4 9.3E-12 3.2E-16 116.8 19.3 132 22-188 37-177 (267)
26 1q7f_A NHL, brain tumor CG1071 99.4 1.9E-11 6.6E-16 114.3 20.7 135 21-188 77-217 (286)
27 3p5b_L Low density lipoprotein 99.4 8.8E-12 3E-16 126.3 19.6 138 21-189 112-257 (400)
28 1rwi_B Serine/threonine-protei 99.4 1E-11 3.6E-16 114.4 18.0 133 21-187 108-243 (270)
29 3m0c_C LDL receptor, low-densi 99.4 1.2E-11 4.2E-16 136.5 20.2 137 22-189 425-569 (791)
30 4a0p_A LRP6, LRP-6, low-densit 99.4 1.7E-11 5.9E-16 131.9 20.3 131 22-187 81-217 (628)
31 2qc5_A Streptogramin B lactona 99.3 1.1E-10 3.7E-15 108.2 21.3 134 21-188 146-282 (300)
32 4a0p_A LRP6, LRP-6, low-densit 99.3 1.9E-11 6.4E-16 131.6 18.2 134 21-188 389-530 (628)
33 3s94_A LRP-6, low-density lipo 99.3 5.4E-11 1.8E-15 127.7 20.5 134 22-189 350-490 (619)
34 2fp8_A Strictosidine synthase; 99.3 3.6E-11 1.2E-15 116.0 15.2 133 22-188 81-239 (322)
35 2qc5_A Streptogramin B lactona 99.3 3.9E-10 1.3E-14 104.4 21.4 134 21-188 104-240 (300)
36 1n7d_A LDL receptor, low-densi 99.3 9.1E-12 3.1E-16 135.3 10.8 134 21-188 453-595 (699)
37 3e5z_A Putative gluconolactona 99.3 1.9E-10 6.6E-15 108.5 18.4 148 5-188 15-182 (296)
38 2z2n_A Virginiamycin B lyase; 99.2 1.4E-09 4.9E-14 100.5 21.1 135 20-188 98-235 (299)
39 2z2n_A Virginiamycin B lyase; 99.2 1.6E-09 5.4E-14 100.2 21.2 131 21-185 141-274 (299)
40 1n7d_A LDL receptor, low-densi 99.2 6.7E-11 2.3E-15 128.5 13.6 114 21-168 496-614 (699)
41 2p4o_A Hypothetical protein; p 99.2 5.5E-10 1.9E-14 107.4 17.9 114 20-169 31-148 (306)
42 2fp8_A Strictosidine synthase; 99.2 2.2E-10 7.6E-15 110.4 15.1 117 21-168 185-313 (322)
43 3dr2_A Exported gluconolactona 99.2 4.4E-10 1.5E-14 107.5 16.3 146 7-188 34-198 (305)
44 3e5z_A Putative gluconolactona 99.2 2.3E-09 8E-14 101.0 20.3 135 22-188 70-228 (296)
45 3dr2_A Exported gluconolactona 99.1 1.5E-09 5.1E-14 103.8 17.8 133 22-188 87-249 (305)
46 3a9g_A Putative uncharacterize 99.1 1.4E-09 4.7E-14 108.7 17.6 152 4-187 15-206 (354)
47 2ism_A Putative oxidoreductase 99.1 1.6E-09 5.4E-14 107.8 16.3 152 6-187 19-211 (352)
48 2p4o_A Hypothetical protein; p 99.1 5.5E-09 1.9E-13 100.5 19.3 140 22-188 73-222 (306)
49 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 7.6E-09 2.6E-13 97.0 16.0 137 22-186 19-180 (314)
50 3g4e_A Regucalcin; six bladed 99.0 5E-09 1.7E-13 99.9 15.0 131 21-186 98-249 (297)
51 3g4e_A Regucalcin; six bladed 99.0 1.3E-08 4.5E-13 97.0 15.9 134 21-188 54-209 (297)
52 2g8s_A Glucose/sorbosone dehyd 98.9 1.7E-08 5.7E-13 100.6 16.4 159 2-187 2-206 (353)
53 2qe8_A Uncharacterized protein 98.9 4.5E-08 1.5E-12 95.6 18.5 156 20-188 66-258 (343)
54 2qe8_A Uncharacterized protein 98.9 4.9E-08 1.7E-12 95.2 17.5 126 21-171 17-157 (343)
55 2ism_A Putative oxidoreductase 98.9 3.8E-08 1.3E-12 97.8 16.2 132 21-166 75-239 (352)
56 2dg1_A DRP35, lactonase; beta 98.9 1.4E-07 4.8E-12 89.7 18.8 145 7-187 34-191 (333)
57 1pjx_A Dfpase, DIISOPROPYLFLUO 98.8 3.8E-08 1.3E-12 92.2 14.0 132 21-186 117-276 (314)
58 3das_A Putative oxidoreductase 98.8 1.1E-07 3.9E-12 95.6 18.3 163 6-200 20-220 (347)
59 3dsm_A Uncharacterized protein 98.8 1.7E-07 5.9E-12 91.0 18.7 134 21-187 84-234 (328)
60 2dg1_A DRP35, lactonase; beta 98.8 7.3E-08 2.5E-12 91.7 15.7 136 21-186 135-288 (333)
61 3sre_A PON1, serum paraoxonase 98.8 4.5E-08 1.5E-12 98.8 14.9 146 21-202 112-287 (355)
62 1cru_A Protein (soluble quinop 98.8 1E-07 3.5E-12 98.6 16.2 159 3-187 12-237 (454)
63 3a9g_A Putative uncharacterize 98.7 4.3E-07 1.5E-11 90.6 17.4 125 21-166 73-229 (354)
64 3dsm_A Uncharacterized protein 98.7 3.8E-07 1.3E-11 88.5 16.3 127 22-187 132-276 (328)
65 2ghs_A AGR_C_1268P; regucalcin 98.6 1.3E-06 4.5E-11 84.6 17.4 130 21-186 134-279 (326)
66 3hfq_A Uncharacterized protein 98.6 1.5E-06 5E-11 83.1 16.1 125 21-167 40-170 (347)
67 3sre_A PON1, serum paraoxonase 98.6 8.6E-08 2.9E-12 96.7 7.6 110 19-167 163-297 (355)
68 2p9w_A MAL S 1 allergenic prot 98.5 9.8E-07 3.4E-11 88.5 14.0 131 22-168 64-215 (334)
69 3no2_A Uncharacterized protein 98.5 1.9E-06 6.6E-11 82.4 15.1 132 22-185 126-273 (276)
70 3hfq_A Uncharacterized protein 98.5 4.6E-06 1.6E-10 79.6 17.6 121 21-167 187-316 (347)
71 3no2_A Uncharacterized protein 98.5 2.5E-06 8.6E-11 81.6 15.6 136 22-188 78-223 (276)
72 2ghs_A AGR_C_1268P; regucalcin 98.4 7E-06 2.4E-10 79.5 16.2 107 22-158 180-293 (326)
73 2p9w_A MAL S 1 allergenic prot 98.4 5E-06 1.7E-10 83.3 15.2 151 22-187 14-194 (334)
74 3u4y_A Uncharacterized protein 98.3 2.1E-05 7.1E-10 74.0 17.6 140 21-185 176-321 (331)
75 2iwa_A Glutamine cyclotransfer 98.3 3.2E-05 1.1E-09 75.0 18.8 148 5-189 52-217 (266)
76 3vgz_A Uncharacterized protein 98.3 4E-05 1.4E-09 72.2 18.3 141 21-188 41-195 (353)
77 3scy_A Hypothetical bacterial 98.3 4.1E-05 1.4E-09 73.5 18.0 119 20-167 210-336 (361)
78 3das_A Putative oxidoreductase 98.2 1.6E-05 5.3E-10 80.0 15.0 124 22-166 81-233 (347)
79 3u4y_A Uncharacterized protein 98.2 3.8E-05 1.3E-09 72.2 16.6 118 21-171 128-255 (331)
80 3vgz_A Uncharacterized protein 98.2 0.00022 7.5E-09 67.1 21.5 134 23-188 143-282 (353)
81 3nol_A Glutamine cyclotransfer 98.2 6.6E-05 2.3E-09 72.8 18.0 148 4-189 72-236 (262)
82 4a9v_A PHOX; hydrolase, beta-p 98.2 1.2E-05 4E-10 85.9 13.5 120 21-155 384-549 (592)
83 3mbr_X Glutamine cyclotransfer 98.2 0.0001 3.5E-09 70.7 18.7 131 23-189 67-215 (243)
84 2g8s_A Glucose/sorbosone dehyd 98.2 5.7E-06 1.9E-10 82.2 10.3 121 22-159 67-219 (353)
85 3scy_A Hypothetical bacterial 98.2 8.6E-05 3E-09 71.3 18.3 139 22-187 156-315 (361)
86 3nok_A Glutaminyl cyclase; bet 98.2 4.4E-05 1.5E-09 74.3 15.8 131 23-189 98-246 (268)
87 1ri6_A Putative isomerase YBHE 98.1 0.00049 1.7E-08 64.1 21.1 140 21-187 178-332 (343)
88 1cru_A Protein (soluble quinop 98.0 4E-05 1.4E-09 79.2 12.9 120 22-159 78-249 (454)
89 2iwa_A Glutamine cyclotransfer 98.0 0.00025 8.5E-09 68.7 16.7 112 22-171 22-138 (266)
90 1ri6_A Putative isomerase YBHE 97.9 0.00064 2.2E-08 63.2 18.4 141 22-187 130-286 (343)
91 3qqz_A Putative uncharacterize 97.9 0.00072 2.5E-08 65.0 18.7 154 22-197 71-241 (255)
92 1l0q_A Surface layer protein; 97.8 0.0014 4.7E-08 62.9 19.2 127 22-186 75-208 (391)
93 3qqz_A Putative uncharacterize 97.8 0.00048 1.6E-08 66.2 15.3 125 23-167 123-252 (255)
94 2wg3_C Hedgehog-interacting pr 97.7 0.00071 2.4E-08 70.3 17.1 160 6-189 2-228 (463)
95 1jof_A Carboxy-CIS,CIS-muconat 97.7 0.00086 2.9E-08 65.1 16.6 149 21-187 145-316 (365)
96 1jof_A Carboxy-CIS,CIS-muconat 97.7 0.00046 1.6E-08 67.1 14.6 132 21-169 193-342 (365)
97 1l0q_A Surface layer protein; 97.7 0.0024 8.2E-08 61.2 18.8 113 22-172 33-151 (391)
98 1jmx_B Amine dehydrogenase; ox 97.5 0.00066 2.3E-08 63.5 12.1 117 23-168 2-134 (349)
99 3mbr_X Glutamine cyclotransfer 97.5 0.0017 5.7E-08 62.2 14.8 110 22-171 22-136 (243)
100 1pby_B Quinohemoprotein amine 97.5 0.0035 1.2E-07 58.0 16.6 115 22-171 35-166 (337)
101 1nir_A Nitrite reductase; hemo 97.5 0.0046 1.6E-07 64.6 19.0 139 22-188 180-334 (543)
102 1jmx_B Amine dehydrogenase; ox 97.5 0.0022 7.5E-08 59.9 15.0 117 22-172 44-179 (349)
103 3nok_A Glutaminyl cyclase; bet 97.4 0.0018 6.3E-08 62.9 13.6 107 24-171 58-167 (268)
104 3nol_A Glutamine cyclotransfer 97.4 0.0024 8.2E-08 61.9 14.1 123 22-167 128-255 (262)
105 3bws_A Protein LP49; two-domai 97.4 0.0069 2.4E-07 58.8 17.1 128 22-186 213-353 (433)
106 2mad_H Methylamine dehydrogena 97.4 0.0065 2.2E-07 60.5 17.2 115 21-166 67-194 (373)
107 3zwu_A Alkaline phosphatase PH 97.3 0.002 6.9E-08 69.0 13.6 120 20-154 383-548 (592)
108 3bws_A Protein LP49; two-domai 97.3 0.0063 2.1E-07 59.1 15.7 109 22-168 304-432 (433)
109 3c75_H MADH, methylamine dehyd 97.2 0.0033 1.1E-07 64.6 13.8 75 21-108 119-206 (426)
110 3c75_H MADH, methylamine dehyd 97.2 0.0031 1.1E-07 64.8 13.5 110 31-172 83-213 (426)
111 3sjl_D Methylamine dehydrogena 97.2 0.0031 1E-07 64.2 13.3 113 29-172 41-173 (386)
112 1qks_A Cytochrome CD1 nitrite 97.2 0.0093 3.2E-07 63.2 16.7 132 20-172 196-377 (567)
113 2mad_H Methylamine dehydrogena 97.1 0.018 6.2E-07 57.2 17.7 47 138-185 319-369 (373)
114 2oiz_A Aromatic amine dehydrog 97.1 0.013 4.4E-07 57.5 15.6 46 139-186 307-356 (361)
115 1nir_A Nitrite reductase; hemo 97.0 0.011 3.7E-07 61.8 15.7 127 21-173 222-360 (543)
116 1fwx_A Nitrous oxide reductase 96.9 0.00061 2.1E-08 73.0 4.4 114 21-161 277-413 (595)
117 1mda_H Methylamine dehydrogena 96.8 0.0056 1.9E-07 61.6 10.8 114 21-168 66-194 (368)
118 1pby_B Quinohemoprotein amine 96.7 0.076 2.6E-06 48.9 17.1 125 33-186 2-143 (337)
119 3sjl_D Methylamine dehydrogena 96.7 0.022 7.4E-07 57.9 14.2 82 21-115 79-176 (386)
120 1mda_H Methylamine dehydrogena 96.6 0.016 5.4E-07 58.3 12.3 105 32-168 32-158 (368)
121 2ece_A 462AA long hypothetical 96.5 0.065 2.2E-06 55.8 16.4 155 4-168 235-425 (462)
122 1tl2_A L10, protein (tachylect 96.5 0.024 8.1E-07 54.1 11.9 107 22-165 42-160 (236)
123 3amr_A 3-phytase; beta-propell 96.4 0.2 6.9E-06 50.4 18.7 161 22-208 69-259 (355)
124 2oiz_A Aromatic amine dehydrog 96.3 0.042 1.4E-06 53.7 13.3 74 21-108 51-137 (361)
125 1gxr_A ESG1, transducin-like e 96.3 0.24 8.2E-06 45.3 17.5 114 22-172 185-300 (337)
126 4a9v_A PHOX; hydrolase, beta-p 96.2 0.02 6.9E-07 61.2 10.9 122 78-203 381-553 (592)
127 1fwx_A Nitrous oxide reductase 96.2 0.079 2.7E-06 56.8 15.1 72 81-168 277-361 (595)
128 3hxj_A Pyrrolo-quinoline quino 96.1 0.074 2.5E-06 49.4 13.0 68 82-169 216-285 (330)
129 3ow8_A WD repeat-containing pr 96.0 0.36 1.2E-05 45.8 18.0 116 22-173 166-284 (321)
130 1qks_A Cytochrome CD1 nitrite 95.9 0.053 1.8E-06 57.3 12.4 106 28-171 163-278 (567)
131 3ow8_A WD repeat-containing pr 95.9 0.46 1.6E-05 45.0 17.9 114 22-171 124-240 (321)
132 3hxj_A Pyrrolo-quinoline quino 95.8 0.25 8.4E-06 45.8 15.5 107 22-167 216-323 (330)
133 2ymu_A WD-40 repeat protein; u 95.8 0.19 6.3E-06 50.6 15.3 106 22-164 469-576 (577)
134 3q6k_A 43.2 kDa salivary prote 95.8 0.066 2.3E-06 54.4 11.9 106 21-156 220-342 (381)
135 2ymu_A WD-40 repeat protein; u 95.7 0.44 1.5E-05 47.8 18.0 111 22-169 428-540 (577)
136 3amr_A 3-phytase; beta-propell 95.7 0.13 4.4E-06 51.8 13.6 84 13-109 172-261 (355)
137 3q6k_A 43.2 kDa salivary prote 95.5 0.41 1.4E-05 48.5 16.6 154 22-199 153-341 (381)
138 1gxr_A ESG1, transducin-like e 95.5 0.46 1.6E-05 43.4 15.5 117 22-172 99-218 (337)
139 4ery_A WD repeat-containing pr 95.4 1.2 4E-05 41.0 18.3 128 6-172 11-142 (312)
140 1got_B GT-beta; complex (GTP-b 95.3 0.8 2.7E-05 43.4 17.2 116 22-171 186-304 (340)
141 2wg3_C Hedgehog-interacting pr 95.2 0.12 4.1E-06 53.4 11.9 123 22-156 70-242 (463)
142 3iz6_a 40S ribosomal protein R 95.2 0.85 2.9E-05 44.0 17.4 122 22-168 251-375 (380)
143 2ece_A 462AA long hypothetical 95.2 0.63 2.1E-05 48.4 17.1 129 22-167 189-351 (462)
144 3ei3_B DNA damage-binding prot 95.2 0.8 2.7E-05 43.5 16.8 112 22-170 165-284 (383)
145 3s25_A Hypothetical 7-bladed b 95.2 0.31 1E-05 47.3 14.0 62 88-170 230-295 (302)
146 4ery_A WD repeat-containing pr 95.1 2 7E-05 39.4 19.5 115 22-172 67-184 (312)
147 3s25_A Hypothetical 7-bladed b 95.0 0.098 3.4E-06 50.8 10.0 109 26-176 109-224 (302)
148 2ynn_A Coatomer subunit beta'; 94.9 1.2 4.1E-05 41.4 16.8 112 22-169 15-129 (304)
149 1got_B GT-beta; complex (GTP-b 94.8 0.87 3E-05 43.1 15.7 109 22-164 228-339 (340)
150 4gqb_B Methylosome protein 50; 94.7 0.36 1.2E-05 46.7 13.1 116 23-171 130-249 (344)
151 1tl2_A L10, protein (tachylect 94.6 0.56 1.9E-05 44.6 13.5 107 24-168 91-210 (236)
152 1k8k_C P40, ARP2/3 complex 41 94.5 0.5 1.7E-05 44.1 13.1 117 22-170 10-129 (372)
153 3mmy_A MRNA export factor; mRN 94.5 0.71 2.4E-05 42.6 14.0 116 22-171 41-163 (368)
154 3vl1_A 26S proteasome regulato 94.4 1.4 4.7E-05 42.1 16.2 131 22-172 141-282 (420)
155 2aq5_A Coronin-1A; WD40 repeat 94.3 3.3 0.00011 39.7 18.9 117 22-170 178-301 (402)
156 3v9f_A Two-component system se 94.3 0.9 3.1E-05 48.7 16.2 119 21-172 495-615 (781)
157 2aq5_A Coronin-1A; WD40 repeat 94.3 0.99 3.4E-05 43.4 15.1 118 22-172 83-211 (402)
158 3iz6_a 40S ribosomal protein R 94.3 2.2 7.6E-05 41.0 17.5 122 23-172 208-333 (380)
159 1vyh_C Platelet-activating fac 94.2 0.74 2.5E-05 45.1 14.2 115 22-172 152-269 (410)
160 3zwl_B Eukaryotic translation 94.1 2.4 8.4E-05 38.9 16.9 110 22-168 220-346 (369)
161 1sq9_A Antiviral protein SKI8; 94.0 1.1 3.6E-05 42.4 14.4 139 22-168 235-395 (397)
162 2pbi_B Guanine nucleotide-bind 94.0 1.4 4.9E-05 42.1 15.5 109 22-164 242-353 (354)
163 1erj_A Transcriptional repress 93.9 1 3.4E-05 43.7 14.4 113 23-171 126-241 (393)
164 3zwl_B Eukaryotic translation 93.9 2.3 7.9E-05 39.1 16.2 123 22-168 76-206 (369)
165 1vyh_C Platelet-activating fac 93.8 0.58 2E-05 45.8 12.6 115 22-172 110-227 (410)
166 3v9f_A Two-component system se 93.7 1 3.5E-05 48.3 15.2 120 22-172 451-572 (781)
167 1sq9_A Antiviral protein SKI8; 93.7 2.4 8.2E-05 39.9 16.3 133 22-172 188-326 (397)
168 2ynn_A Coatomer subunit beta'; 93.6 3.3 0.00011 38.4 16.8 112 23-169 58-173 (304)
169 4aow_A Guanine nucleotide-bind 93.5 3 0.0001 38.0 16.2 118 22-168 217-337 (340)
170 1k8k_C P40, ARP2/3 complex 41 93.5 1.5 5.1E-05 40.8 14.2 113 22-167 54-172 (372)
171 1r5m_A SIR4-interacting protei 93.4 1.3 4.6E-05 41.6 13.8 111 22-169 249-362 (425)
172 1erj_A Transcriptional repress 93.4 2.8 9.6E-05 40.5 16.5 117 22-168 167-287 (393)
173 2vdu_B TRNA (guanine-N(7)-)-me 93.4 1.3 4.3E-05 43.6 14.2 117 21-171 150-274 (450)
174 3zwu_A Alkaline phosphatase PH 93.3 0.9 3.1E-05 48.6 13.8 121 78-202 381-552 (592)
175 4h5i_A Guanine nucleotide-exch 93.2 1.2 4E-05 43.1 13.5 69 83-168 272-343 (365)
176 2hqs_A Protein TOLB; TOLB, PAL 92.8 7.8 0.00027 38.0 19.1 115 22-173 224-349 (415)
177 2pm9_A Protein WEB1, protein t 92.8 2.4 8.3E-05 40.1 14.7 114 22-169 216-338 (416)
178 1r5m_A SIR4-interacting protei 92.8 2.3 8E-05 39.9 14.5 126 22-171 47-183 (425)
179 3mkq_A Coatomer beta'-subunit; 92.7 4.1 0.00014 42.7 17.7 112 22-169 15-129 (814)
180 3fm0_A Protein CIAO1; WDR39,SG 92.7 2.3 7.9E-05 40.3 14.5 114 22-168 18-136 (345)
181 4e54_B DNA damage-binding prot 92.7 1.9 6.4E-05 42.3 14.2 117 22-169 121-241 (435)
182 4g56_B MGC81050 protein; prote 92.6 0.8 2.8E-05 44.0 11.3 116 22-171 141-261 (357)
183 4gqb_B Methylosome protein 50; 92.6 4 0.00014 39.2 16.3 116 22-171 171-292 (344)
184 3ei3_B DNA damage-binding prot 92.6 2 6.9E-05 40.6 13.9 113 22-168 120-236 (383)
185 2pbi_B Guanine nucleotide-bind 92.5 5.1 0.00017 38.1 16.8 115 23-171 199-318 (354)
186 3frx_A Guanine nucleotide-bind 92.5 5.8 0.0002 37.0 16.9 115 22-173 109-232 (319)
187 3vl1_A 26S proteasome regulato 92.4 2.8 9.4E-05 39.9 14.7 110 27-172 104-216 (420)
188 3frx_A Guanine nucleotide-bind 92.4 4.1 0.00014 38.1 15.7 116 22-167 198-316 (319)
189 3fm0_A Protein CIAO1; WDR39,SG 92.3 3.6 0.00012 38.9 15.4 114 22-169 63-182 (345)
190 4aez_A CDC20, WD repeat-contai 92.3 7.4 0.00025 37.3 17.8 115 22-170 261-382 (401)
191 3mkq_A Coatomer beta'-subunit; 92.3 2.6 8.8E-05 44.2 15.5 112 22-168 57-172 (814)
192 3f3f_A Nucleoporin SEH1; struc 92.3 2.9 9.8E-05 37.7 13.9 113 22-169 13-144 (351)
193 3k26_A Polycomb protein EED; W 92.1 3.2 0.00011 38.1 14.3 115 22-168 71-192 (366)
194 3lrv_A PRE-mRNA-splicing facto 92.1 5.1 0.00018 37.5 16.0 114 22-171 127-247 (343)
195 3dm0_A Maltose-binding peripla 92.0 4.6 0.00016 42.2 17.0 119 22-173 474-597 (694)
196 4e54_B DNA damage-binding prot 91.9 1.6 5.3E-05 42.9 12.6 113 22-168 166-282 (435)
197 2hqs_A Protein TOLB; TOLB, PAL 91.9 5.3 0.00018 39.2 16.5 113 22-171 180-303 (415)
198 2xyi_A Probable histone-bindin 91.9 2.2 7.6E-05 41.8 13.7 115 22-168 279-410 (430)
199 4a2l_A BT_4663, two-component 91.7 3.1 0.00011 44.6 15.6 126 22-180 499-627 (795)
200 3jrp_A Fusion protein of prote 91.5 2.4 8.2E-05 39.2 12.8 117 22-169 13-135 (379)
201 4a2l_A BT_4663, two-component 91.5 3.8 0.00013 43.9 16.0 131 22-182 453-586 (795)
202 1nr0_A Actin interacting prote 91.4 1.4 4.9E-05 45.5 12.2 118 23-170 451-569 (611)
203 4aez_A CDC20, WD repeat-contai 90.6 12 0.00042 35.7 18.1 73 83-172 220-297 (401)
204 3dw8_B Serine/threonine-protei 90.5 8.7 0.0003 36.7 16.1 142 22-171 228-376 (447)
205 3sfz_A APAF-1, apoptotic pepti 90.4 4.1 0.00014 45.4 15.4 116 22-172 617-736 (1249)
206 2xyi_A Probable histone-bindin 90.2 4.5 0.00015 39.5 14.0 121 22-169 130-264 (430)
207 1nr0_A Actin interacting prote 90.2 14 0.00048 38.0 18.4 139 22-173 192-360 (611)
208 2xzm_R RACK1; ribosome, transl 90.2 12 0.00041 35.0 16.5 112 22-167 120-243 (343)
209 1pgu_A Actin interacting prote 90.1 12 0.00042 37.1 17.4 121 22-172 162-287 (615)
210 3dwl_C Actin-related protein 2 90.1 1.1 3.8E-05 42.2 9.1 113 22-167 57-176 (377)
211 2pm9_A Protein WEB1, protein t 90.0 3.6 0.00012 38.9 12.7 121 22-172 69-201 (416)
212 2pm7_B Protein transport prote 90.0 6.7 0.00023 36.1 14.3 112 23-168 12-132 (297)
213 3odt_A Protein DOA1; ubiquitin 90.0 10 0.00035 33.8 16.4 110 22-170 186-298 (313)
214 4g56_B MGC81050 protein; prote 90.0 3.5 0.00012 39.4 12.7 72 83-172 229-305 (357)
215 3o4h_A Acylamino-acid-releasin 89.7 1.5 5E-05 44.8 10.3 114 24-166 153-274 (582)
216 2vdu_B TRNA (guanine-N(7)-)-me 89.6 5.1 0.00017 39.2 13.9 117 22-172 104-233 (450)
217 3lrv_A PRE-mRNA-splicing facto 89.4 9 0.00031 35.8 15.0 116 22-168 172-292 (343)
218 3k26_A Polycomb protein EED; W 89.3 5.8 0.0002 36.3 13.3 72 22-108 117-189 (366)
219 3vu4_A KMHSV2; beta-propeller 89.0 7.3 0.00025 37.0 14.2 125 22-167 197-335 (355)
220 1pgu_A Actin interacting prote 88.7 7.7 0.00026 38.6 14.6 111 21-167 489-613 (615)
221 3dw8_B Serine/threonine-protei 88.6 7.7 0.00026 37.0 14.0 128 22-168 179-315 (447)
222 3sfz_A APAF-1, apoptotic pepti 88.5 11 0.00039 41.8 17.2 113 22-170 659-776 (1249)
223 2xzm_R RACK1; ribosome, transl 88.5 8.2 0.00028 36.2 14.0 112 23-168 24-149 (343)
224 3mmy_A MRNA export factor; mRN 88.4 15 0.0005 33.5 17.5 68 22-108 88-157 (368)
225 2z3z_A Dipeptidyl aminopeptida 88.4 22 0.00077 36.6 18.4 118 22-170 259-393 (706)
226 3dm0_A Maltose-binding peripla 88.2 9.7 0.00033 39.7 15.6 118 22-171 432-553 (694)
227 3v7d_B Cell division control p 87.8 10 0.00036 36.6 14.6 109 27-173 275-386 (464)
228 2ojh_A Uncharacterized protein 87.2 14 0.00049 32.2 15.7 69 22-108 43-116 (297)
229 1yfq_A Cell cycle arrest prote 86.9 4.6 0.00016 37.0 10.8 114 22-168 13-131 (342)
230 3ott_A Two-component system se 86.7 9.8 0.00034 40.4 14.7 116 22-172 473-590 (758)
231 3i2n_A WD repeat-containing pr 86.4 6.5 0.00022 36.0 11.6 109 28-168 176-291 (357)
232 3azo_A Aminopeptidase; POP fam 86.3 20 0.00069 36.7 16.5 84 22-116 243-332 (662)
233 3dwl_C Actin-related protein 2 86.3 1.9 6.3E-05 40.6 7.9 132 22-171 102-239 (377)
234 2hes_X YDR267CP; beta-propelle 86.1 14 0.00047 34.6 13.9 112 22-167 109-229 (330)
235 3azo_A Aminopeptidase; POP fam 86.0 13 0.00044 38.1 14.8 79 23-116 190-281 (662)
236 4h5i_A Guanine nucleotide-exch 85.9 3.3 0.00011 39.8 9.7 69 22-108 271-340 (365)
237 1yfq_A Cell cycle arrest prote 85.1 22 0.00075 32.3 14.9 125 21-172 151-286 (342)
238 3odt_A Protein DOA1; ubiquitin 85.1 20 0.00069 31.8 16.4 110 22-166 61-172 (313)
239 3vu4_A KMHSV2; beta-propeller 85.1 16 0.00055 34.6 14.1 70 83-168 198-271 (355)
240 2hes_X YDR267CP; beta-propelle 85.0 12 0.00042 34.9 13.0 113 22-168 60-184 (330)
241 3v7d_B Cell division control p 84.7 29 0.001 33.4 18.3 114 22-173 312-426 (464)
242 3jrp_A Fusion protein of prote 84.4 24 0.00083 32.2 19.4 118 22-169 103-241 (379)
243 2ecf_A Dipeptidyl peptidase IV 84.1 26 0.00088 36.4 16.2 82 22-108 38-135 (741)
244 2z3z_A Dipeptidyl aminopeptida 84.0 20 0.00068 37.0 15.2 65 22-108 83-147 (706)
245 3bg1_A Protein SEC13 homolog; 83.6 9.6 0.00033 35.4 11.5 112 23-168 16-136 (316)
246 2ojh_A Uncharacterized protein 83.6 22 0.00074 31.0 14.7 72 83-171 44-122 (297)
247 3jro_A Fusion protein of prote 83.5 5.7 0.0002 42.4 11.1 116 22-168 11-132 (753)
248 2oaj_A Protein SNI1; WD40 repe 83.0 5 0.00017 44.3 10.6 74 25-108 440-516 (902)
249 3gre_A Serine/threonine-protei 82.5 35 0.0012 32.5 15.6 115 23-170 171-294 (437)
250 3jro_A Fusion protein of prote 82.3 26 0.00089 37.3 15.7 118 22-169 101-239 (753)
251 2oaj_A Protein SNI1; WD40 repe 82.1 15 0.00053 40.3 14.1 111 22-171 19-132 (902)
252 3gre_A Serine/threonine-protei 82.0 35 0.0012 32.6 15.1 130 22-172 113-249 (437)
253 2j04_A TAU60, YPL007P, hypothe 82.0 57 0.002 34.7 18.2 72 23-108 132-208 (588)
254 2oit_A Nucleoporin 214KDA; NH2 81.6 3.9 0.00013 40.8 8.4 116 22-168 94-223 (434)
255 3i2n_A WD repeat-containing pr 81.6 31 0.001 31.3 14.7 126 22-171 67-202 (357)
256 3o4h_A Acylamino-acid-releasin 81.0 8.1 0.00028 39.2 10.6 71 84-172 153-231 (582)
257 4aow_A Guanine nucleotide-bind 80.2 33 0.0011 30.9 17.9 81 10-108 30-114 (340)
258 2j04_A TAU60, YPL007P, hypothe 80.1 15 0.0005 39.3 12.5 117 22-170 87-213 (588)
259 2ecf_A Dipeptidyl peptidase IV 77.4 10 0.00034 39.5 10.2 66 23-108 111-178 (741)
260 4a11_B DNA excision repair pro 76.5 47 0.0016 30.6 20.0 85 22-108 188-273 (408)
261 3pe7_A Oligogalacturonate lyas 75.9 37 0.0013 31.6 12.9 64 26-108 41-108 (388)
262 4gga_A P55CDC, cell division c 75.0 60 0.0021 31.1 15.3 109 22-168 149-261 (420)
263 1xfd_A DIP, dipeptidyl aminope 74.9 14 0.00047 38.2 10.4 72 21-108 17-97 (723)
264 3ott_A Two-component system se 73.1 39 0.0013 35.7 13.6 108 22-168 518-626 (758)
265 4gga_A P55CDC, cell division c 68.1 86 0.0029 29.9 15.3 67 23-108 108-175 (420)
266 1p22_A F-BOX/WD-repeat protein 67.6 67 0.0023 30.8 12.9 62 27-108 138-199 (435)
267 4a11_B DNA excision repair pro 67.4 77 0.0026 29.1 17.1 85 83-170 189-278 (408)
268 3pe7_A Oligogalacturonate lyas 67.1 80 0.0027 29.2 13.6 26 25-51 85-111 (388)
269 1k32_A Tricorn protease; prote 66.4 41 0.0014 37.1 12.3 68 22-108 380-458 (1045)
270 4a5s_A Dipeptidyl peptidase 4 65.6 24 0.00083 37.2 10.0 27 23-51 19-45 (740)
271 2j04_B YDR362CP, TAU91; beta p 65.5 18 0.0006 37.3 8.7 67 84-168 359-428 (524)
272 1xfd_A DIP, dipeptidyl aminope 65.4 99 0.0034 31.7 14.4 69 22-108 62-140 (723)
273 1k32_A Tricorn protease; prote 65.3 1.2E+02 0.004 33.4 15.8 35 82-116 380-416 (1045)
274 4gq1_A NUP37; propeller, trans 64.6 22 0.00076 34.1 8.8 110 31-170 100-220 (393)
275 2ovr_B FBW7, F-BOX/WD repeat p 60.6 1.2E+02 0.0041 29.0 16.0 70 84-168 366-442 (445)
276 4gq1_A NUP37; propeller, trans 60.2 1E+02 0.0034 29.4 12.6 129 22-168 138-286 (393)
277 2pm7_B Protein transport prote 59.4 1E+02 0.0035 27.8 15.0 59 92-168 170-238 (297)
278 2j04_B YDR362CP, TAU91; beta p 56.6 1E+02 0.0035 31.5 12.6 116 22-171 268-389 (524)
279 4ggc_A P55CDC, cell division c 56.4 1.1E+02 0.0036 27.1 16.5 108 23-168 70-181 (318)
280 2gop_A Trilobed protease; beta 56.2 95 0.0033 28.2 11.2 30 22-51 60-94 (347)
281 3f3f_A Nucleoporin SEH1; struc 54.0 1.2E+02 0.0039 26.8 16.5 127 22-169 112-250 (351)
282 3sbq_A Nitrous-oxide reductase 53.5 25 0.00087 37.7 7.3 75 21-108 323-405 (638)
283 3q7m_A Lipoprotein YFGL, BAMB; 52.0 1.2E+02 0.004 28.4 11.3 55 31-108 239-293 (376)
284 3elq_A Arylsulfate sulfotransf 51.3 2.2E+02 0.0075 30.2 14.1 76 22-102 356-454 (571)
285 2xbg_A YCF48-like protein; pho 51.2 1.6E+02 0.0054 27.6 15.9 120 7-164 108-230 (327)
286 3c5m_A Oligogalacturonate lyas 50.8 1.5E+02 0.0051 27.2 15.2 121 23-171 240-387 (396)
287 2w18_A PALB2, fancn, partner a 48.7 2.1E+02 0.0073 28.3 17.1 27 25-51 183-212 (356)
288 1p22_A F-BOX/WD-repeat protein 48.2 1.9E+02 0.0064 27.6 15.8 67 84-172 260-329 (435)
289 1z68_A Fibroblast activation p 47.9 1E+02 0.0035 31.8 10.9 71 22-108 17-96 (719)
290 2bkl_A Prolyl endopeptidase; m 41.5 2.2E+02 0.0074 29.5 12.3 80 24-117 171-269 (695)
291 4ggc_A P55CDC, cell division c 41.2 1.9E+02 0.0063 25.5 15.5 66 24-108 29-95 (318)
292 2oit_A Nucleoporin 214KDA; NH2 41.1 58 0.002 32.2 7.5 72 22-111 151-224 (434)
293 3c5m_A Oligogalacturonate lyas 40.9 2.1E+02 0.0073 26.1 12.8 29 23-51 38-69 (396)
294 1kv9_A Type II quinohemoprotei 40.3 3.5E+02 0.012 28.4 15.5 16 90-105 322-337 (668)
295 4a5s_A Dipeptidyl peptidase 4 40.0 34 0.0012 36.1 5.9 28 24-51 65-101 (740)
296 3sbq_A Nitrous-oxide reductase 39.4 52 0.0018 35.4 7.0 83 81-168 323-408 (638)
297 1kv9_A Type II quinohemoprotei 38.3 2.6E+02 0.0089 29.3 12.4 26 145-171 466-491 (668)
298 4h3o_A Lectin; cadmium, plant 37.4 1.5E+02 0.0052 23.6 8.2 24 83-106 52-75 (105)
299 2ovr_B FBW7, F-BOX/WD repeat p 36.4 2.8E+02 0.0097 26.2 18.2 68 85-171 324-394 (445)
300 3bg1_A Protein SEC13 homolog; 36.0 1.2E+02 0.004 27.8 8.3 70 23-108 60-133 (316)
301 1z68_A Fibroblast activation p 34.4 1.2E+02 0.004 31.3 8.8 62 23-108 62-136 (719)
302 1k3i_A Galactose oxidase precu 33.7 4.2E+02 0.014 27.4 15.8 122 22-174 187-329 (656)
303 3dzw_A Agglutinin; lectin, man 32.8 1.5E+02 0.0052 23.6 7.5 22 84-105 52-73 (109)
304 3mez_B Mannose-specific lectin 32.8 1.5E+02 0.0051 23.9 7.5 18 85-102 60-77 (113)
305 2gop_A Trilobed protease; beta 30.9 2.6E+02 0.009 25.1 9.8 26 83-108 61-91 (347)
306 4h3o_A Lectin; cadmium, plant 30.1 2.1E+02 0.0071 22.8 9.8 14 85-98 86-99 (105)
307 1kb0_A Quinohemoprotein alcoho 26.9 5.7E+02 0.019 26.8 14.1 27 145-172 485-511 (677)
308 2xdw_A Prolyl endopeptidase; a 26.6 5.4E+02 0.019 26.5 15.6 25 84-108 236-265 (710)
309 3q7m_A Lipoprotein YFGL, BAMB; 26.4 3.9E+02 0.013 24.7 16.8 38 148-186 239-276 (376)
310 1xip_A Nucleoporin NUP159; bet 24.8 4E+02 0.014 26.3 10.5 128 26-190 43-182 (388)
311 2xdw_A Prolyl endopeptidase; a 23.4 6.2E+02 0.021 26.0 13.9 29 23-51 127-160 (710)
312 3mez_A Mannose-specific lectin 21.8 1.2E+02 0.0041 24.4 4.9 18 84-101 52-69 (111)
313 3elq_A Arylsulfate sulfotransf 20.6 6.3E+02 0.022 26.6 11.3 80 79-160 353-455 (571)
314 3r0e_B Lectin; carbohydrate bi 20.6 2.1E+02 0.0071 22.9 6.1 21 84-104 56-76 (110)
315 3a0c_A Mannose/sialic acid-bin 20.4 3.2E+02 0.011 21.6 7.8 22 84-105 53-74 (110)
316 3s9j_A Member of DUF4221 famil 20.2 6.2E+02 0.021 24.8 10.9 71 29-112 35-112 (369)
317 2q58_A Fragment, farnesyl pyro 20.0 24 0.00083 35.1 0.3 20 358-377 5-24 (368)
No 1
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.87 E-value=5.7e-22 Score=208.45 Aligned_cols=149 Identities=26% Similarity=0.337 Sum_probs=124.2
Q ss_pred CceEEEEcCCCc-EEEEECCCCeEEEEeCCCCc--ccccEEEecCCCCcccccCCcccccccCCcc-eEEEc-------C
Q 014345 22 EPYSVEVLPGGE-LLILDSANSNLYRISSSLSL--YSRPKLVAGSAEGYSGHVDGKPREARMNHPK-GLTVD-------D 90 (426)
Q Consensus 22 ~P~GIaVd~dG~-LYVaD~~n~rI~kid~dg~~--~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~-GIaVd-------~ 90 (426)
.|++||++++|+ |||+|+.+|+|++++.++.. .....+++|.. |..|..||.+..|+|++|. |++++ .
T Consensus 311 ~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~-g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~ 389 (496)
T 3kya_A 311 WEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGY-KQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEE 389 (496)
T ss_dssp CCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBT-TBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSC
T ss_pred CceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCC-CCCcccCCcccccccCCCeEEEEEccccccccC
Confidence 699999999998 89999999999998877532 12247888874 5667778999999999999 89998 6
Q ss_pred CCCEEEEECCCCEEEEEc-CCCcEEEeCCcc------CCCCCCCCC-CcccccCCCCCeeEEECCC-CeEEEEECCCCeE
Q 014345 91 RGNIYIADTMNMAIRKIS-DSGVTTIAGGKW------GRGGGHVDG-PSEDAKFSNDFDVVYIGSS-CSLLVIDRGNRAI 161 (426)
Q Consensus 91 dG~LYVADt~N~rIrk~d-~g~VstIaGg~~------g~~~G~~dG-~~~~a~f~~P~gIa~vd~~-G~LYVaDsgN~rI 161 (426)
+|+|||||+.|||||+|+ +|.++|++|... +...|..+| ++..++|+.|++|+ ++++ |+|||+|++|+||
T Consensus 390 ~g~lyVaD~~N~rIr~i~~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIa-vd~~~g~lyVaD~~N~rI 468 (496)
T 3kya_A 390 EYDFYFVDRLNFCVRKVTPEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLV-YDDVKEMFYVHDQVGHTI 468 (496)
T ss_dssp CEEEEEEEGGGTEEEEECTTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEE-EETTTTEEEEEETTTTEE
T ss_pred CCeEEEEECCCCEEEEEeCCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEE-EECCCCEEEEEeCCCCEE
Confidence 899999999999999999 777999998522 122355677 88899999999999 5664 9999999999999
Q ss_pred EEEEcCCCceE
Q 014345 162 REIQLHFDDCA 172 (426)
Q Consensus 162 r~I~l~~~~~~ 172 (426)
|+|+++++.|.
T Consensus 469 rki~~~~~~~~ 479 (496)
T 3kya_A 469 RTISMEQEENV 479 (496)
T ss_dssp EEEEECCCC--
T ss_pred EEEECCCCccc
Confidence 99999887664
No 2
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.84 E-value=3.4e-20 Score=190.68 Aligned_cols=144 Identities=24% Similarity=0.367 Sum_probs=120.9
Q ss_pred CceEEEEcCCCc-EEEEECCCCeEEEEeCCC--CcccccEEEecCCCCcccccCCcccccccCCcceEEE---------c
Q 014345 22 EPYSVEVLPGGE-LLILDSANSNLYRISSSL--SLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTV---------D 89 (426)
Q Consensus 22 ~P~GIaVd~dG~-LYVaD~~n~rI~kid~dg--~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaV---------d 89 (426)
.+.+|+++++|+ |||+|..+|+|++++.++ .....+.+++|.. +..|..+|.+..++|+.|.||++ |
T Consensus 274 ~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~-g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd 352 (433)
T 4hw6_A 274 SNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQH-SSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEE 352 (433)
T ss_dssp SCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECT-TCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSS
T ss_pred CcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecC-CCCccCCCcccceEEcCCccEEEEccccccccC
Confidence 567899999998 999999999999998763 2234567888873 55667788888999999999999 8
Q ss_pred CCCCEEEEECCCCEEEEEc-CCCcEEEeCCccCCCCCCCCC-CcccccCCCCCeeEEEC-CCCeEEEEECCCCeEEEEEc
Q 014345 90 DRGNIYIADTMNMAIRKIS-DSGVTTIAGGKWGRGGGHVDG-PSEDAKFSNDFDVVYIG-SSCSLLVIDRGNRAIREIQL 166 (426)
Q Consensus 90 ~dG~LYVADt~N~rIrk~d-~g~VstIaGg~~g~~~G~~dG-~~~~a~f~~P~gIa~vd-~~G~LYVaDsgN~rIr~I~l 166 (426)
.+|+|||||+.|++|++++ +|.+.+++|.......|..+| .+..++|+.|++|+ ++ ++|+|||+|++|+||++|++
T Consensus 353 ~~g~lyvaD~~n~~I~~~~~~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~gia-vd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 353 DEYDFYFCDRDSHTVRVLTPEGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIA-YDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp CCEEEEEEETTTTEEEEECTTSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEE-EETTTTEEEEEEGGGTEEEEEEE
T ss_pred CCCcEEEEECCCCEEEEECCCCCEEEEEeCCCCCccccCCCccccccEeCCCcEEE-EECCCCEEEEEeCCCCEEEEEec
Confidence 9999999999999999999 677899998533222355666 77888999999999 56 89999999999999999987
Q ss_pred C
Q 014345 167 H 167 (426)
Q Consensus 167 ~ 167 (426)
+
T Consensus 432 e 432 (433)
T 4hw6_A 432 E 432 (433)
T ss_dssp C
T ss_pred C
Confidence 5
No 3
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.80 E-value=9e-19 Score=177.93 Aligned_cols=138 Identities=27% Similarity=0.412 Sum_probs=117.7
Q ss_pred Cce-EEEEcC-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEEC
Q 014345 22 EPY-SVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADT 99 (426)
Q Consensus 22 ~P~-GIaVd~-dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt 99 (426)
.|. +|++++ +|.|||+|..+++|++++.++ .+.+++|.. +..|..+|.+..++|+.|.||++|++|+|||||+
T Consensus 267 ~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g----~~~~~~g~~-~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~ 341 (409)
T 3hrp_A 267 NPGPYLIYYFVDSNFYMSDQNLSSVYKITPDG----ECEWFCGSA-TQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDG 341 (409)
T ss_dssp SSCCEEEEETTTTEEEEEETTTTEEEEECTTC----CEEEEEECT-TCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEET
T ss_pred CccccEEEeCCCCEEEEEeCCCCEEEEEecCC----CEEEEEeCC-CCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeC
Confidence 477 999999 689999999999999999984 567888874 3556677888889999999999999999999999
Q ss_pred -CCCEEEEEc--CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 014345 100 -MNMAIRKIS--DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 167 (426)
Q Consensus 100 -~N~rIrk~d--~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~ 167 (426)
.|++|++++ ++.+.+++|.... .|..+|.+..+.|..|++|+ ++++|+|||+|++|++|++|+++
T Consensus 342 ~~~~~I~~~~~~~G~v~~~~g~~~~--~g~~~g~~~~~~~~~P~gia-vd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 342 FKGYCLRKLDILDGYVSTVAGQVDV--ASQIDGTPLEATFNYPYDIC-YDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp TTTCEEEEEETTTTEEEEEEECTTC--BSCCCBSTTTCCBSSEEEEE-ECSSSEEEEEESTTCEEEEEEEC
T ss_pred CCCCEEEEEECCCCEEEEEeCCCCC--CCcCCCChhceEeCCceEEE-EcCCCCEEEEECCCCeEEEEEeC
Confidence 999999999 4558888874221 34556777888999999999 68889999999999999999863
No 4
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.80 E-value=3.1e-19 Score=183.00 Aligned_cols=144 Identities=29% Similarity=0.451 Sum_probs=119.0
Q ss_pred CCceEEEEcCCCc-EEEEECCCCeEEEEeCCCC--cccccEEEecCCCCcccccCCcccccccCCcc-eEEEc-------
Q 014345 21 IEPYSVEVLPGGE-LLILDSANSNLYRISSSLS--LYSRPKLVAGSAEGYSGHVDGKPREARMNHPK-GLTVD------- 89 (426)
Q Consensus 21 ~~P~GIaVd~dG~-LYVaD~~n~rI~kid~dg~--~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~-GIaVd------- 89 (426)
..|.+|+++++|+ |||+|..+++|++++.++. ....+.+++|.. +..|..+|.+..++|++|. |++++
T Consensus 270 ~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~-g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~ 348 (430)
T 3tc9_A 270 GWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQ-GAKDWVDGVGKKARMHAPRQGTFVKNPAYKGS 348 (430)
T ss_dssp SCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECT-TCBCCBCEEGGGCBBSSEEEEEEEECGGGTTS
T ss_pred CcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccC-CCCCCCCCCCcceEeCCCcceEEEcccccccc
Confidence 3799999999999 9999999999999988752 223467888864 5566667888889999999 89994
Q ss_pred -CCCCEEEEECCCCEEEEEc-CCCcEEEeCCcc-CCCCCCCCC-CcccccCCCCCeeEEECC-CCeEEEEECCCCeEEEE
Q 014345 90 -DRGNIYIADTMNMAIRKIS-DSGVTTIAGGKW-GRGGGHVDG-PSEDAKFSNDFDVVYIGS-SCSLLVIDRGNRAIREI 164 (426)
Q Consensus 90 -~dG~LYVADt~N~rIrk~d-~g~VstIaGg~~-g~~~G~~dG-~~~~a~f~~P~gIa~vd~-~G~LYVaDsgN~rIr~I 164 (426)
++|+|||||+.|++|++++ +|.+.+++|... +. .|..+| ++..++|+.|++|+ +++ ++.|||+|++|++|++|
T Consensus 349 D~~g~lyvaD~~n~~I~~i~~~G~v~~~~g~g~~~~-~G~~dG~~~~~~~~~~P~gia-vd~~~g~lyVaD~~n~rIr~i 426 (430)
T 3tc9_A 349 SDEYDFYFCDRENHCIRILTPQGRVTTFAGRGSNGT-SGYNDGDLRQEARFNHPEGIV-YDEERECFFIGDRENRRIRKI 426 (430)
T ss_dssp SCCEEEEEEEGGGTEEEEECTTSEEEEEEECCTTSS-SSCBCEETTTTCBCSSEEEEE-EETTTTEEEEEEGGGTEEEEE
T ss_pred CCCCeEEEEECCCcEEEEECCCCcEEEEEeCCCCCC-CcccCCCchhhcEeCCCcEEE-EECCCCEEEEEECCCCeEEEE
Confidence 6699999999999999999 677889988422 22 344466 77888999999999 566 79999999999999999
Q ss_pred EcC
Q 014345 165 QLH 167 (426)
Q Consensus 165 ~l~ 167 (426)
+++
T Consensus 427 ~~e 429 (430)
T 3tc9_A 427 GYE 429 (430)
T ss_dssp EEC
T ss_pred ccC
Confidence 875
No 5
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.65 E-value=1.4e-14 Score=140.71 Aligned_cols=136 Identities=18% Similarity=0.252 Sum_probs=102.1
Q ss_pred CCCCCceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC-CCCEEE
Q 014345 18 KLGIEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYI 96 (426)
Q Consensus 18 ~l~~~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~-dG~LYV 96 (426)
..+..|.+|+++++|+|||+|..+++|++++.++.. ..+..+... +..|.. ...|+.|.+|++++ +|+|||
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~-~~~~~~~~~--~~~g~~-----~~~~~~P~~ia~~~~~g~lyv 159 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKE-GPLLILGRS--MQPGSD-----QNHFCQPTDVAVEPSTGAVFV 159 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSS-CCSEEESBT--TBCCCS-----TTCCSSEEEEEECTTTCCEEE
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCe-EEEEEeccc--CCCCCC-----ccccCCCcEEEEeCCCCeEEE
Confidence 334589999999999999999999999999998642 123444322 223321 23588999999999 899999
Q ss_pred EEC-CCCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCC-CeEEEEECCCCeEEEEEcCC
Q 014345 97 ADT-MNMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSS-CSLLVIDRGNRAIREIQLHF 168 (426)
Q Consensus 97 ADt-~N~rIrk~d-~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~-G~LYVaDsgN~rIr~I~l~~ 168 (426)
||+ .+++|++++ ++.+...++.. +. ......+.|..|.+|+ ++++ ++|||+|.++++|++++++.
T Consensus 160 ~d~~~~~~I~~~~~~g~~~~~~~~~-g~-----~~~~~~~~~~~p~gia-~d~~~g~l~v~d~~~~~I~~~~~~~ 227 (329)
T 3fvz_A 160 SDGYCNSRIVQFSPSGKFVTQWGEE-SS-----GSSPRPGQFSVPHSLA-LVPHLDQLCVADRENGRIQCFKTDT 227 (329)
T ss_dssp EECSSCCEEEEECTTSCEEEEECEE-CC-----SSSCCTTEESCEEEEE-EETTTTEEEEEETTTTEEEEEETTT
T ss_pred EeCCCCCeEEEEcCCCCEEEEeccC-CC-----CCCCCCcccCCCcEEE-EECCCCEEEEEECCCCEEEEEECCC
Confidence 997 799999999 66655554421 11 0122345788999999 5666 99999999999999999983
No 6
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.62 E-value=3.5e-15 Score=156.90 Aligned_cols=132 Identities=17% Similarity=0.188 Sum_probs=99.8
Q ss_pred CCceEEEEcC-CCcEEEEECCCCeEEEEeCC-------CCcccc---------cEEEecCCCCcccccCCcccccccCCc
Q 014345 21 IEPYSVEVLP-GGELLILDSANSNLYRISSS-------LSLYSR---------PKLVAGSAEGYSGHVDGKPREARMNHP 83 (426)
Q Consensus 21 ~~P~GIaVd~-dG~LYVaD~~n~rI~kid~d-------g~~~g~---------v~~vaG~~~G~~G~~dG~a~~A~Ln~P 83 (426)
..|+++++++ +|.|||+|..+++|++++.+ +..... ...++.. ..-..|
T Consensus 247 ~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~--------------~~~~~p 312 (496)
T 3kya_A 247 KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI--------------ADPSWE 312 (496)
T ss_dssp SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC--------------SSSSCC
T ss_pred CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEec--------------CCCCCc
Confidence 3799999999 78899999999999999986 221100 0111100 012358
Q ss_pred ceEEEcCCCC-EEEEECCCCEEEEEc-CCCc------EEEeCCccCCCCCCCCCCcccccCCCCCeeEEEC-------CC
Q 014345 84 KGLTVDDRGN-IYIADTMNMAIRKIS-DSGV------TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIG-------SS 148 (426)
Q Consensus 84 ~GIaVd~dG~-LYVADt~N~rIrk~d-~g~V------stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd-------~~ 148 (426)
.+||++++|+ |||||+.||+|++++ ++.. .+++|.. +. .|+.||++..++|+.|.++++++ .+
T Consensus 313 ~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~-g~-~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~ 390 (496)
T 3kya_A 313 FQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGY-KQ-SGYRDDVGTEARMNNPCQGVFVKNPDYTGEEE 390 (496)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBT-TB-CCCBCCBGGGCBCSSEEEEEEEECTTCCSSCC
T ss_pred eEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCC-CC-CcccCCcccccccCCCeEEEEEccccccccCC
Confidence 9999999998 899999999999988 4432 5777742 22 45568899999999999444466 68
Q ss_pred CeEEEEECCCCeEEEEEcCC
Q 014345 149 CSLLVIDRGNRAIREIQLHF 168 (426)
Q Consensus 149 G~LYVaDsgN~rIr~I~l~~ 168 (426)
|+|||||++|||||+|++++
T Consensus 391 g~lyVaD~~N~rIr~i~~~G 410 (496)
T 3kya_A 391 YDFYFVDRLNFCVRKVTPEG 410 (496)
T ss_dssp EEEEEEEGGGTEEEEECTTC
T ss_pred CeEEEEECCCCEEEEEeCCC
Confidence 99999999999999999766
No 7
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.62 E-value=6.4e-15 Score=151.38 Aligned_cols=129 Identities=12% Similarity=0.167 Sum_probs=101.4
Q ss_pred CCceEEEEcC-CCcEEEEECCCCeEEEEeCCCCccccc-EEEecCCCCcccccCCcccccccCCcceEEEcCCCC-EEEE
Q 014345 21 IEPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRP-KLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIA 97 (426)
Q Consensus 21 ~~P~GIaVd~-dG~LYVaD~~n~rI~kid~dg~~~g~v-~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LYVA 97 (426)
..|.+|++++ +|+|||+|..+++|++++.++ +.+ ..+.... . ...+.+|+++++|+ |||+
T Consensus 228 ~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~---g~~~~~~~~~~---------~-----~~~~~~ia~dpdG~~LYva 290 (433)
T 4hw6_A 228 RGAKTCAVHPQNGKIYYTRYHHAMISSYDPAT---GTLTEEEVMMD---------T-----KGSNFHIVWHPTGDWAYII 290 (433)
T ss_dssp SSBCCCEECTTTCCEEECBTTCSEEEEECTTT---CCEEEEEEECS---------C-----CSSCEEEEECTTSSEEEEE
T ss_pred CCCCEEEEeCCCCeEEEEECCCCEEEEEECCC---CeEEEEEeccC---------C-----CCCcccEEEeCCCCEEEEE
Confidence 4799999999 899999999999999999973 233 3333221 0 12356899999998 9999
Q ss_pred ECCCCEEEEEc-C---CC---cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEE--------CCCCeEEEEECCCCeEE
Q 014345 98 DTMNMAIRKIS-D---SG---VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYI--------GSSCSLLVIDRGNRAIR 162 (426)
Q Consensus 98 Dt~N~rIrk~d-~---g~---VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~v--------d~~G~LYVaDsgN~rIr 162 (426)
|..+++|++++ + +. +.+++|.. +. .|..+|.+..+.|+.|.+|+++ +.+|+|||+|++|++|+
T Consensus 291 d~~~~~I~~~~~d~~~~~~~~~~~~ag~~-g~-~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~ 368 (433)
T 4hw6_A 291 YNGKHCIYRVDYNRETGKLAVPYIVCGQH-SS-PGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVR 368 (433)
T ss_dssp ETTTTEEEEEEBCTTTCCBCCCEEEEECT-TC-CCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEE
T ss_pred eCCCCEEEEEeCCCCCcccCcEEEEEecC-CC-CccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEE
Confidence 99999999988 3 22 35677641 11 3556777888999999999942 88999999999999999
Q ss_pred EEEcCC
Q 014345 163 EIQLHF 168 (426)
Q Consensus 163 ~I~l~~ 168 (426)
+|++++
T Consensus 369 ~~~~~G 374 (433)
T 4hw6_A 369 VLTPEG 374 (433)
T ss_dssp EECTTS
T ss_pred EECCCC
Confidence 999765
No 8
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.62 E-value=6.4e-15 Score=150.95 Aligned_cols=147 Identities=18% Similarity=0.188 Sum_probs=110.5
Q ss_pred CCceEEEEcC-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCC-EEEEE
Q 014345 21 IEPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIAD 98 (426)
Q Consensus 21 ~~P~GIaVd~-dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LYVAD 98 (426)
..|++|++++ +|.|||+|..+++|++++.++. ....+.... ....|++|+++++|+ |||+|
T Consensus 226 ~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~---~~~~~~~~~--------------~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 226 QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQ---ETTPLFTIQ--------------DSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp SSCCCEEECTTTCCEEEEETTTTEEEEEETTTT---EEEEEEECS--------------SSSCCEEEEECTTSSEEEEEE
T ss_pred CCceEEEEeCCCCEEEEEECCCCEEEEEECCCC---cEEEEEEcC--------------CCCcceeEEEcCCCCEEEEEE
Confidence 4799999999 8999999999999999999853 222332211 024699999999999 99999
Q ss_pred CCCCEEEEEc-CCC------cEEEeCCccCCCCCCCCCCcccccCCCCC-eeEEE--------CCCCeEEEEECCCCeEE
Q 014345 99 TMNMAIRKIS-DSG------VTTIAGGKWGRGGGHVDGPSEDAKFSNDF-DVVYI--------GSSCSLLVIDRGNRAIR 162 (426)
Q Consensus 99 t~N~rIrk~d-~g~------VstIaGg~~g~~~G~~dG~~~~a~f~~P~-gIa~v--------d~~G~LYVaDsgN~rIr 162 (426)
..+++|++++ ++. +.+++|.. +. .|..+|.+..+.|+.|. +++ + |++|+|||+|++|++|+
T Consensus 289 ~~~~~I~~~~~d~~~~~~~~~~~~ag~~-g~-~g~~dg~~~~a~~~~P~~gv~-v~~~~y~~~D~~g~lyvaD~~n~~I~ 365 (430)
T 3tc9_A 289 VNQHYILRSDYDWKTKRLTTPYIVCGQQ-GA-KDWVDGVGKKARMHAPRQGTF-VKNPAYKGSSDEYDFYFCDRENHCIR 365 (430)
T ss_dssp TTTTEEEEEEEETTTTEECCCEEEEECT-TC-BCCBCEEGGGCBBSSEEEEEE-EECGGGTTSSCCEEEEEEEGGGTEEE
T ss_pred CCCCEEEEEeCCcccccccceEEEeccC-CC-CCCCCCCCcceEeCCCcceEE-EccccccccCCCCeEEEEECCCcEEE
Confidence 9999999998 442 45677632 11 34456777788999999 676 6 56799999999999999
Q ss_pred EEEcCCCceEeec------------------CCCCcceEEEEe
Q 014345 163 EIQLHFDDCAYQY------------------GSSFPLGIAVLL 187 (426)
Q Consensus 163 ~I~l~~~~~~~~~------------------~~g~P~GIAv~~ 187 (426)
+|+.++...+... .+..|.|||++.
T Consensus 366 ~i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~ 408 (430)
T 3tc9_A 366 ILTPQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDE 408 (430)
T ss_dssp EECTTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEET
T ss_pred EECCCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEEC
Confidence 9997653222211 123699999985
No 9
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.60 E-value=4.3e-14 Score=143.40 Aligned_cols=152 Identities=19% Similarity=0.191 Sum_probs=115.0
Q ss_pred CCCceEEEEcC-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcc-eEEEcC-CCCEEE
Q 014345 20 GIEPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPK-GLTVDD-RGNIYI 96 (426)
Q Consensus 20 ~~~P~GIaVd~-dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~-GIaVd~-dG~LYV 96 (426)
+..|+++++++ +|.|||+|. +++|++++.++ +...++++.. ..+. . -..|. +|++++ +|.|||
T Consensus 218 ~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~---~~~~~~~~~~--~~g~-~-------~~~P~~~ia~~p~~g~lyv 283 (409)
T 3hrp_A 218 SGKIGAVALDETEEWLYFVDS-NKNFGRFNVKT---QEVTLIKQLE--LSGS-L-------GTNPGPYLIYYFVDSNFYM 283 (409)
T ss_dssp CSCCCBCEECTTSSEEEEECT-TCEEEEEETTT---CCEEEEEECC--CCSC-C-------CCSSCCEEEEETTTTEEEE
T ss_pred cCCcEEEEEeCCCCeEEEEEC-CCcEEEEECCC---CCEEEEeccc--ccCC-C-------CCCccccEEEeCCCCEEEE
Confidence 45799999999 899999886 78999999985 3345554431 1111 1 12377 999999 689999
Q ss_pred EECCCCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEEC-CCCeEEEEEcCCCceEee
Q 014345 97 ADTMNMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDR-GNRAIREIQLHFDDCAYQ 174 (426)
Q Consensus 97 ADt~N~rIrk~d-~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDs-gN~rIr~I~l~~~~~~~~ 174 (426)
+|..+++|++++ ++.+.+++|.... .|..+|.+..+.|..|.+|+ ++++|+|||+|+ ++++|+++++........
T Consensus 284 ~d~~~~~I~~~~~~g~~~~~~g~~~~--~g~~dg~~~~~~~~~P~gia-~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~ 360 (409)
T 3hrp_A 284 SDQNLSSVYKITPDGECEWFCGSATQ--KTVQDGLREEALFAQPNGMT-VDEDGNFYIVDGFKGYCLRKLDILDGYVSTV 360 (409)
T ss_dssp EETTTTEEEEECTTCCEEEEEECTTC--CSCBCEEGGGCBCSSEEEEE-ECTTCCEEEEETTTTCEEEEEETTTTEEEEE
T ss_pred EeCCCCEEEEEecCCCEEEEEeCCCC--CCcCCCcccccEeCCCeEEE-EeCCCCEEEEeCCCCCEEEEEECCCCEEEEE
Confidence 999999999999 7778888874311 35566777788999999999 789999999999 999999999544333322
Q ss_pred cC----------------CCCcceEEEEec
Q 014345 175 YG----------------SSFPLGIAVLLA 188 (426)
Q Consensus 175 ~~----------------~g~P~GIAv~~g 188 (426)
.+ +..|.|||++..
T Consensus 361 ~g~~~~~g~~~g~~~~~~~~~P~giavd~~ 390 (409)
T 3hrp_A 361 AGQVDVASQIDGTPLEATFNYPYDICYDGE 390 (409)
T ss_dssp EECTTCBSCCCBSTTTCCBSSEEEEEECSS
T ss_pred eCCCCCCCcCCCChhceEeCCceEEEEcCC
Confidence 21 356889998853
No 10
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.57 E-value=9.9e-14 Score=134.65 Aligned_cols=143 Identities=18% Similarity=0.242 Sum_probs=105.2
Q ss_pred CCCceEEEEcCCCcEEEEECCCC------------------------eEEEEeCCCCcccccEEEecCCCCcccccCCcc
Q 014345 20 GIEPYSVEVLPGGELLILDSANS------------------------NLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKP 75 (426)
Q Consensus 20 ~~~P~GIaVd~dG~LYVaD~~n~------------------------rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a 75 (426)
+..|.+||++++|+|||++..++ +|++++.+. +++....+.
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~---g~~~~~~~~------------ 87 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNN---AEILQSSGK------------ 87 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTT---CCEEEEECT------------
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCC---CeEEeccCC------------
Confidence 34899999999999999999884 588888763 333333332
Q ss_pred cccccCCcceEEEcCCCCEEEEECCCCEEEEEc-CCC---cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECC-CCe
Q 014345 76 REARMNHPKGLTVDDRGNIYIADTMNMAIRKIS-DSG---VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGS-SCS 150 (426)
Q Consensus 76 ~~A~Ln~P~GIaVd~dG~LYVADt~N~rIrk~d-~g~---VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~-~G~ 150 (426)
..|+.|.||++|++|+|||+|..+++|++++ ++. +.++ +... . .|. ....|..|.+|+ +++ ++.
T Consensus 88 --~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~-~~~~-~-~g~-----~~~~~~~P~~ia-~~~~~g~ 156 (329)
T 3fvz_A 88 --NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLIL-GRSM-Q-PGS-----DQNHFCQPTDVA-VEPSTGA 156 (329)
T ss_dssp --TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEE-SBTT-B-CCC-----STTCCSSEEEEE-ECTTTCC
T ss_pred --CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEe-cccC-C-CCC-----CccccCCCcEEE-EeCCCCe
Confidence 2378899999999999999999999999999 555 3333 3211 1 111 234688999999 677 899
Q ss_pred EEEEEC-CCCeEEEEEcCCCceEeec-----------CCCCcceEEEEec
Q 014345 151 LLVIDR-GNRAIREIQLHFDDCAYQY-----------GSSFPLGIAVLLA 188 (426)
Q Consensus 151 LYVaDs-gN~rIr~I~l~~~~~~~~~-----------~~g~P~GIAv~~g 188 (426)
|||+|. ++++|++++.++....... ....|.+||++..
T Consensus 157 lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~ 206 (329)
T 3fvz_A 157 VFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPH 206 (329)
T ss_dssp EEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETT
T ss_pred EEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECC
Confidence 999997 8999999997765443322 1234899999853
No 11
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.52 E-value=4.2e-13 Score=133.42 Aligned_cols=132 Identities=18% Similarity=0.171 Sum_probs=103.7
Q ss_pred CceEEEEcC-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC-CCCEEEEEC
Q 014345 22 EPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~-dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~-dG~LYVADt 99 (426)
.|.|||+|. +|+||++|..+++|.+++.+|.. ..+++. ..|..|+||++|+ +|.||++|.
T Consensus 117 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~---~~~l~~---------------~~l~~P~~iavdp~~g~ly~td~ 178 (349)
T 3v64_C 117 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH---RKVLLW---------------QSLEKPRAIALHPMEGTIYWTDW 178 (349)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEEC---------------TTCSCEEEEEEETTTTEEEEEEC
T ss_pred CccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc---eEEEEe---------------CCCCCcceEEEecCcCeEEEecc
Confidence 799999997 78899999999999999998642 233321 1277899999997 688999999
Q ss_pred CC-CEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEe--ec
Q 014345 100 MN-MAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAY--QY 175 (426)
Q Consensus 100 ~N-~rIrk~d-~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~~--~~ 175 (426)
.+ ++|.+++ +|...+.... ..+..|++|++...++.||++|+++++|.++++++..... ..
T Consensus 179 ~~~~~I~r~~~dG~~~~~~~~---------------~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~ 243 (349)
T 3v64_C 179 GNTPRIEASSMDGSGRRIIAD---------------THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQ 243 (349)
T ss_dssp SSSCEEEEEETTSCSCEESCC---------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS
T ss_pred CCCCEEEEEeCCCCCcEEEEE---------------CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeC
Confidence 98 9999999 6664443321 1366899999544688999999999999999998755432 34
Q ss_pred CCCCcceEEEE
Q 014345 176 GSSFPLGIAVL 186 (426)
Q Consensus 176 ~~g~P~GIAv~ 186 (426)
..+.|.|||+.
T Consensus 244 ~~~~P~giav~ 254 (349)
T 3v64_C 244 GLPHPFAITVF 254 (349)
T ss_dssp SCSSEEEEEEE
T ss_pred CCCCceEEEEE
Confidence 45789999995
No 12
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.49 E-value=9.8e-13 Score=128.50 Aligned_cols=134 Identities=16% Similarity=0.071 Sum_probs=102.8
Q ss_pred CCceEEEEcC-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC-CCCEEEEE
Q 014345 21 IEPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIAD 98 (426)
Q Consensus 21 ~~P~GIaVd~-dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~-dG~LYVAD 98 (426)
..|.|||+|. +|+||++|..+++|.+++.+|.. ..+++.. .+..|+||++|+ +|.||++|
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~---~~~~~~~---------------~~~~P~~iavdp~~g~ly~~d 138 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK---RKTLFRE---------------NGSKPRAIVVDPVHGFMYWTD 138 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS---EEEEEEC---------------TTCCEEEEEEETTTTEEEEEE
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCc---eEEEEEC---------------CCCCcceEEeCCCCCEEEEEc
Confidence 3799999996 77899999999999999998632 2333211 267899999997 68899999
Q ss_pred CCC-CEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEee--
Q 014345 99 TMN-MAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQ-- 174 (426)
Q Consensus 99 t~N-~rIrk~d-~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~~~-- 174 (426)
.++ ++|.+++ +|...++... ..+..|++|++...++.||++|+.+++|.++++++......
T Consensus 139 ~~~~~~I~~~~~dG~~~~~~~~---------------~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~ 203 (316)
T 1ijq_A 139 WGTPAKIKKGGLNGVDIYSLVT---------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE 203 (316)
T ss_dssp CSSSCEEEEEETTSCCEEEEEC---------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEE
T ss_pred cCCCCeEEEEcCCCCCeEEEEE---------------CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEee
Confidence 986 8999999 7665433321 13668999995446789999999999999999987544332
Q ss_pred --cCCCCcceEEEEe
Q 014345 175 --YGSSFPLGIAVLL 187 (426)
Q Consensus 175 --~~~g~P~GIAv~~ 187 (426)
.....|.||+++.
T Consensus 204 ~~~~~~~P~giav~~ 218 (316)
T 1ijq_A 204 DEKRLAHPFSLAVFE 218 (316)
T ss_dssp CTTTTSSEEEEEEET
T ss_pred cCCccCCcEEEEEEC
Confidence 1346799999973
No 13
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.49 E-value=6e-13 Score=134.04 Aligned_cols=132 Identities=19% Similarity=0.167 Sum_probs=103.4
Q ss_pred CceEEEEcC-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC-CCCEEEEEC
Q 014345 22 EPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~-dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~-dG~LYVADt 99 (426)
.|.|||+|+ .|+||++|..+++|.+++.+|.. ..+++.. .|..|+||++|+ +|.||++|.
T Consensus 160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~---~~~l~~~---------------~l~~P~giavdp~~g~ly~td~ 221 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH---RKVLLWQ---------------SLEKPRAIALHPMEGTIYWTDW 221 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTTTEEEECBTTSCS---CEEEECS---------------SCSCEEEEEEETTTTEEEEEEC
T ss_pred CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc---eEEeecC---------------CCCCCcEEEEEcCCCeEEEecc
Confidence 799999997 68899999999999999998632 2333211 277899999996 678999999
Q ss_pred CC-CEEEEEc-CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEe--e
Q 014345 100 MN-MAIRKIS-DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAY--Q 174 (426)
Q Consensus 100 ~N-~rIrk~d-~g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~~--~ 174 (426)
.+ ++|.+++ +|.. .++... .+..|++|++...++.||++|+.+++|.++++++..... .
T Consensus 222 ~~~~~I~r~~~dG~~~~~~~~~----------------~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~ 285 (386)
T 3v65_B 222 GNTPRIEASSMDGSGRRIIADT----------------HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVIS 285 (386)
T ss_dssp SSSCEEEEEETTSCSCEEEECS----------------SCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEEC
T ss_pred CCCCEEEEEeCCCCCcEEEEEC----------------CCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEE
Confidence 98 9999999 6664 344321 266899999543788999999999999999998755432 3
Q ss_pred cCCCCcceEEEEe
Q 014345 175 YGSSFPLGIAVLL 187 (426)
Q Consensus 175 ~~~g~P~GIAv~~ 187 (426)
...+.|.||+++.
T Consensus 286 ~~~~~P~giav~~ 298 (386)
T 3v65_B 286 QGLPHPFAITVFE 298 (386)
T ss_dssp SSCSSEEEEEEET
T ss_pred CCCCCceEEEEEC
Confidence 3456899999953
No 14
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.48 E-value=3.7e-12 Score=119.20 Aligned_cols=134 Identities=16% Similarity=0.226 Sum_probs=101.1
Q ss_pred CCceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECC
Q 014345 21 IEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 100 (426)
Q Consensus 21 ~~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~ 100 (426)
..|++|+++++|+|||++..+++|++++.++ ......+.. ..+..|.+|+++++|+|||+|..
T Consensus 121 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g----~~~~~~~~~-------------~~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 121 QHPRGVTVDNKGRIIVVECKVMRVIIFDQNG----NVLHKFGCS-------------KHLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECTTS----CEEEEEECT-------------TTCSSEEEEEECSSSEEEEEEGG
T ss_pred CCceEEEEeCCCCEEEEECCCCEEEEEcCCC----CEEEEeCCC-------------CccCCcEEEEECCCCCEEEEECC
Confidence 4799999999999999999999999999874 222222221 12667999999999999999999
Q ss_pred CCEEEEEc-CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCC-eEEEEEcCCCceEeec--
Q 014345 101 NMAIRKIS-DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNR-AIREIQLHFDDCAYQY-- 175 (426)
Q Consensus 101 N~rIrk~d-~g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~-rIr~I~l~~~~~~~~~-- 175 (426)
+++|++++ ++.. .++... ..+..|.+|+ ++++|+|||++.+++ +|.+++..+.......
T Consensus 184 ~~~i~~~~~~g~~~~~~~~~---------------g~~~~p~~i~-~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~ 247 (286)
T 1q7f_A 184 AHCVKVFNYEGQYLRQIGGE---------------GITNYPIGVG-INSNGEILIADNHNNFNLTIFTQDGQLISALESK 247 (286)
T ss_dssp GTEEEEEETTCCEEEEESCT---------------TTSCSEEEEE-ECTTCCEEEEECSSSCEEEEECTTSCEEEEEEES
T ss_pred CCEEEEEcCCCCEEEEEccC---------------CccCCCcEEE-ECCCCCEEEEeCCCCEEEEEECCCCCEEEEEccc
Confidence 99999999 5553 333221 1256799998 688999999999886 9999998765433221
Q ss_pred -CCCCcceEEEEe
Q 014345 176 -GSSFPLGIAVLL 187 (426)
Q Consensus 176 -~~g~P~GIAv~~ 187 (426)
....|.+|+++.
T Consensus 248 ~~~~~~~~i~~~~ 260 (286)
T 1q7f_A 248 VKHAQCFDVALMD 260 (286)
T ss_dssp SCCSCEEEEEEET
T ss_pred CCCCcceeEEECC
Confidence 123477888874
No 15
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.48 E-value=8.2e-13 Score=133.92 Aligned_cols=133 Identities=16% Similarity=0.099 Sum_probs=103.2
Q ss_pred CceEEEEcC-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC-CCCEEEEEC
Q 014345 22 EPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~-dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~-dG~LYVADt 99 (426)
.|.|||||. .++||++|..+++|.+++.+|.. ..+++.. .|..|+||++|+ .|.||++|.
T Consensus 160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~---~~~l~~~---------------~~~~P~~iavdp~~g~ly~td~ 221 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK---RKTLFRE---------------NGSKPRAIVVDPVHGFMYWTDW 221 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEECTTTCS---EEEEEEC---------------SSCCEEEEEEETTTTEEEEEEC
T ss_pred CcccEEEEecCCceEEEECCCCeEEEEeCCCCc---eEEEEeC---------------CCCCcceEEEecccCeEEEEeC
Confidence 799999998 78999999999999999998632 3333321 277899999997 688999998
Q ss_pred C-CCEEEEEc-CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEee-c
Q 014345 100 M-NMAIRKIS-DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQ-Y 175 (426)
Q Consensus 100 ~-N~rIrk~d-~g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~~~-~ 175 (426)
+ +++|.+++ +|.. .++.. ..|..|++|++...++.||++|+.+++|.++++++...... .
T Consensus 222 ~~~~~I~~~~~dG~~~~~~~~----------------~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~ 285 (400)
T 3p5b_L 222 GTPAKIKKGGLNGVDIYSLVT----------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILE 285 (400)
T ss_dssp SSSCCEEEEETTSCSCEEEEC----------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEE
T ss_pred CCCCEEEEEeCCCCccEEEEE----------------CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEe
Confidence 7 58999999 6664 44432 13678999995447889999999999999999987654332 1
Q ss_pred ---CCCCcceEEEEec
Q 014345 176 ---GSSFPLGIAVLLA 188 (426)
Q Consensus 176 ---~~g~P~GIAv~~g 188 (426)
....|.||++..+
T Consensus 286 ~~~~l~~P~gl~v~~~ 301 (400)
T 3p5b_L 286 DEKRLAHPFSLAVFED 301 (400)
T ss_dssp CSSTTSSEEEEEEETT
T ss_pred CCCCCCCCEEEEEeCC
Confidence 3467889988633
No 16
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.47 E-value=2.6e-12 Score=127.63 Aligned_cols=145 Identities=14% Similarity=0.135 Sum_probs=109.5
Q ss_pred CcEEEEEecCCCCCCCceEEEEcC-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcce
Q 014345 7 GYTVETVFDGSKLGIEPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKG 85 (426)
Q Consensus 7 G~tv~tv~~g~~l~~~P~GIaVd~-dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~G 85 (426)
|...+.+..+. ..|.+|++|+ ++.||++|..+++|++++.+++ ....++.. .+..|.|
T Consensus 62 g~~~~~~~~~~---~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~---~~~~~~~~---------------~~~~p~g 120 (349)
T 3v64_C 62 RSEYTLLLNNL---ENAIALDFHHRRELVFWSDVTLDRILRANLNGS---NVEEVVST---------------GLESPGG 120 (349)
T ss_dssp SCCEEEEECSC---SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECS---------------SCSCCCE
T ss_pred CCeeEEeecCC---CceEEEEEeccccEEEEEeccCCceEEEecCCC---CceEEEeC---------------CCCCccE
Confidence 33444444432 2799999996 7889999999999999999863 23444322 1667999
Q ss_pred EEEcC-CCCEEEEECCCCEEEEEc-CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCC-CeE
Q 014345 86 LTVDD-RGNIYIADTMNMAIRKIS-DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGN-RAI 161 (426)
Q Consensus 86 IaVd~-dG~LYVADt~N~rIrk~d-~g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN-~rI 161 (426)
|++|. .|+||++|..+++|.+++ +|.. .++.. ..+..|.+|++....+.||++|+++ ++|
T Consensus 121 lavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~----------------~~l~~P~~iavdp~~g~ly~td~~~~~~I 184 (349)
T 3v64_C 121 LAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW----------------QSLEKPRAIALHPMEGTIYWTDWGNTPRI 184 (349)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC----------------TTCSCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred EEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe----------------CCCCCcceEEEecCcCeEEEeccCCCCEE
Confidence 99996 689999999999999999 6664 33331 1356899999543588999999998 999
Q ss_pred EEEEcCCCceEee--cCCCCcceEEEEec
Q 014345 162 REIQLHFDDCAYQ--YGSSFPLGIAVLLA 188 (426)
Q Consensus 162 r~I~l~~~~~~~~--~~~g~P~GIAv~~g 188 (426)
.++++++...... .....|.|||++..
T Consensus 185 ~r~~~dG~~~~~~~~~~~~~PnGla~d~~ 213 (349)
T 3v64_C 185 EASSMDGSGRRIIADTHLFWPNGLTIDYA 213 (349)
T ss_dssp EEEETTSCSCEESCCSSCSCEEEEEEETT
T ss_pred EEEeCCCCCcEEEEECCCCCcceEEEeCC
Confidence 9999988655443 34567999999944
No 17
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.47 E-value=1.1e-12 Score=129.25 Aligned_cols=132 Identities=16% Similarity=0.126 Sum_probs=103.4
Q ss_pred CceEEEEcC-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC-CCCEEEEEC
Q 014345 22 EPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~-dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~-dG~LYVADt 99 (426)
.|.|||+|. +|+||++|..+++|.+++.+|.. ..+++. ..+..|+||++|+ .|.||++|.
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~---~~~l~~---------------~~~~~P~giavdp~~g~ly~td~ 141 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL---RKVLFW---------------QELDQPRAIALDPSSGFMYWTDW 141 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEEC---------------SSCSSEEEEEEEGGGTEEEEEEC
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCc---EEEEEe---------------CCCCCccEEEEeCCCCEEEEEec
Confidence 799999996 78899999999999999998632 233331 1277899999997 588999997
Q ss_pred C-CCEEEEEc-CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEee--
Q 014345 100 M-NMAIRKIS-DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQ-- 174 (426)
Q Consensus 100 ~-N~rIrk~d-~g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~~~-- 174 (426)
+ +++|.+++ +|.. .++.. ..+..|++|++...++.||++|+.+++|.++++++......
T Consensus 142 ~~~~~I~r~~~dG~~~~~~~~----------------~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~ 205 (318)
T 3sov_A 142 GEVPKIERAGMDGSSRFIIIN----------------SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVK 205 (318)
T ss_dssp SSSCEEEEEETTSCSCEEEEC----------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC
T ss_pred CCCCEEEEEEcCCCCeEEEEE----------------CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEec
Confidence 6 79999999 6664 34432 13678999995445889999999999999999987554332
Q ss_pred cCCCCcceEEEEe
Q 014345 175 YGSSFPLGIAVLL 187 (426)
Q Consensus 175 ~~~g~P~GIAv~~ 187 (426)
.....|.||+++.
T Consensus 206 ~~~~~P~glav~~ 218 (318)
T 3sov_A 206 GSLPHPFALTLFE 218 (318)
T ss_dssp SCCSCEEEEEEET
T ss_pred CCCCCceEEEEeC
Confidence 2467899999973
No 18
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.46 E-value=2.9e-12 Score=120.25 Aligned_cols=132 Identities=17% Similarity=0.224 Sum_probs=99.9
Q ss_pred CCceEEEEcC-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC-CCCEEEEE
Q 014345 21 IEPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIAD 98 (426)
Q Consensus 21 ~~P~GIaVd~-dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~-dG~LYVAD 98 (426)
..|++|++++ .|.|||+|..+++|.+++.++.. ...+... .+..|++|++|+ .|.|||+|
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~---~~~~~~~---------------~~~~P~~i~vd~~~g~lyv~~ 140 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ---RRVLFDT---------------GLVNPRGIVTDPVRGNLYWTD 140 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEECS---------------SCSSEEEEEEETTTTEEEEEE
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC---EEEEEEC---------------CCCCccEEEEeeCCCEEEEEE
Confidence 3799999998 47899999999999999998632 2333211 156799999998 58899999
Q ss_pred CC--CCEEEEEc-CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceE-e
Q 014345 99 TM--NMAIRKIS-DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCA-Y 173 (426)
Q Consensus 99 t~--N~rIrk~d-~g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~-~ 173 (426)
.. +++|.+++ ++.. .++.. ..+..|.+|++....+.|||+|+++++|.++++++.... .
T Consensus 141 ~~~~~~~I~~~~~dg~~~~~~~~----------------~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~ 204 (267)
T 1npe_A 141 WNRDNPKIETSHMDGTNRRILAQ----------------DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKV 204 (267)
T ss_dssp CCSSSCEEEEEETTSCCCEEEEC----------------TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEE
T ss_pred CCCCCcEEEEEecCCCCcEEEEE----------------CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEE
Confidence 87 68999998 6653 33321 125679999953346799999999999999999864332 2
Q ss_pred ecCCCCcceEEEE
Q 014345 174 QYGSSFPLGIAVL 186 (426)
Q Consensus 174 ~~~~g~P~GIAv~ 186 (426)
......|.||+++
T Consensus 205 ~~~~~~P~gi~~d 217 (267)
T 1npe_A 205 LEGLQYPFAVTSY 217 (267)
T ss_dssp EECCCSEEEEEEE
T ss_pred ecCCCCceEEEEe
Confidence 3455679999987
No 19
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.45 E-value=2.8e-12 Score=126.49 Aligned_cols=130 Identities=19% Similarity=0.212 Sum_probs=98.8
Q ss_pred CCceEEEEcC-CCcEEEEECC-CCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC-CCCEEEE
Q 014345 21 IEPYSVEVLP-GGELLILDSA-NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIA 97 (426)
Q Consensus 21 ~~P~GIaVd~-dG~LYVaD~~-n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~-dG~LYVA 97 (426)
..|.||++|+ .|.||++|.. +++|.+++.+|.. ...++.. .|..|+|||+|+ +++||++
T Consensus 122 ~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~---~~~~~~~---------------~l~~Pnglavd~~~~~lY~a 183 (318)
T 3sov_A 122 DQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS---RFIIINS---------------EIYWPNGLTLDYEEQKLYWA 183 (318)
T ss_dssp SSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS---CEEEECS---------------SCSCEEEEEEETTTTEEEEE
T ss_pred CCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC---eEEEEEC---------------CCCCccEEEEeccCCEEEEE
Confidence 4799999998 6889999975 7999999999632 3333321 277899999997 6789999
Q ss_pred ECCCCEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC-CCc-eEe
Q 014345 98 DTMNMAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH-FDD-CAY 173 (426)
Q Consensus 98 Dt~N~rIrk~d-~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~-~~~-~~~ 173 (426)
|+.+++|++++ +|. ..+++.+ .+..|.+|+ ++ .+.||++|+++++|.++++. +.. ...
T Consensus 184 D~~~~~I~~~d~dG~~~~~~~~~----------------~~~~P~gla-v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 184 DAKLNFIHKSNLDGTNRQAVVKG----------------SLPHPFALT-LF-EDILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp ETTTTEEEEEETTSCSCEEEECS----------------CCSCEEEEE-EE-TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred ECCCCEEEEEcCCCCceEEEecC----------------CCCCceEEE-Ee-CCEEEEEecCCCeEEEEECCCCCceEEE
Confidence 99999999999 665 4444421 356899999 45 57999999999999999984 332 233
Q ss_pred ecCCCCcceEEEE
Q 014345 174 QYGSSFPLGIAVL 186 (426)
Q Consensus 174 ~~~~g~P~GIAv~ 186 (426)
......|.+|++.
T Consensus 246 ~~~~~~P~~i~v~ 258 (318)
T 3sov_A 246 HSDIFSPMDIHAF 258 (318)
T ss_dssp ECCCSSCCCEEEE
T ss_pred eCCCCCCcEEEEe
Confidence 3444567777765
No 20
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.45 E-value=3.5e-12 Score=128.41 Aligned_cols=133 Identities=15% Similarity=0.157 Sum_probs=104.5
Q ss_pred CceEEEEcC-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC-CCCEEEEEC
Q 014345 22 EPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~-dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~-dG~LYVADt 99 (426)
.|.||++++ ++.||++|..+++|++++.+++ ....++.. .+..|.||++|. .|+||++|.
T Consensus 117 ~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~---~~~~~~~~---------------~~~~p~glavd~~~g~lY~~d~ 178 (386)
T 3v65_B 117 NAIALDFHHRRELVFWSDVTLDRILRANLNGS---NVEEVVST---------------GLESPGGLAVDWVHDKLYWTDS 178 (386)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSC---CEEEEECS---------------SCSCCCCEEEETTTTEEEEEET
T ss_pred ccEEEEEecCCCeEEEEeCCCCcEEEEecCCC---CcEEEEeC---------------CCCCccEEEEEeCCCeEEEEcC
Confidence 799999996 6789999999999999999863 23444322 166799999996 688999999
Q ss_pred CCCEEEEEc-CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCC-CeEEEEEcCCCceEee--
Q 014345 100 MNMAIRKIS-DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGN-RAIREIQLHFDDCAYQ-- 174 (426)
Q Consensus 100 ~N~rIrk~d-~g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN-~rIr~I~l~~~~~~~~-- 174 (426)
.+++|.+++ +|.. .++.. ..|..|.+|++....+.||++|+++ ++|.++++++......
T Consensus 179 ~~~~I~~~~~dg~~~~~l~~----------------~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~ 242 (386)
T 3v65_B 179 GTSRIEVANLDGAHRKVLLW----------------QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD 242 (386)
T ss_dssp TTTEEEECBTTSCSCEEEEC----------------SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred CCCeEEEEeCCCCceEEeec----------------CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEE
Confidence 999999999 6654 34432 1366899999544688999999998 9999999988655433
Q ss_pred cCCCCcceEEEEec
Q 014345 175 YGSSFPLGIAVLLA 188 (426)
Q Consensus 175 ~~~g~P~GIAv~~g 188 (426)
.....|.|||++..
T Consensus 243 ~~~~~PnGlavd~~ 256 (386)
T 3v65_B 243 THLFWPNGLTIDYA 256 (386)
T ss_dssp SSCSCEEEEEEEGG
T ss_pred CCCCCeeeEEEeCC
Confidence 44567999999843
No 21
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.45 E-value=3.8e-12 Score=117.33 Aligned_cols=133 Identities=22% Similarity=0.316 Sum_probs=100.9
Q ss_pred CCceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECC
Q 014345 21 IEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 100 (426)
Q Consensus 21 ~~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~ 100 (426)
..|.+|+++++|+|||++. +++|++++.++.. ...+.. ..+..|.+|+++++|+|||+|..
T Consensus 67 ~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~---~~~~~~---------------~~~~~p~~i~~~~~g~l~v~~~~ 127 (270)
T 1rwi_B 67 YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNN---QTVLPF---------------DGLNYPEGLAVDTQGAVYVADRG 127 (270)
T ss_dssp CSCCCEEECTTCCEEEEET-TTEEEEECTTCSC---CEECCC---------------CSCSSEEEEEECTTCCEEEEEGG
T ss_pred CCcceeEECCCCCEEEEcC-CCEEEEEeCCCce---Eeeeec---------------CCcCCCcceEECCCCCEEEEECC
Confidence 4799999999999999998 8899999988532 222211 11567999999999999999999
Q ss_pred CCEEEEEcCCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEee--cCC
Q 014345 101 NMAIRKISDSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQ--YGS 177 (426)
Q Consensus 101 N~rIrk~d~g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~~~--~~~ 177 (426)
+++|.+++.+.. ..... ...+..|.+|+ ++++|+|||++..+++|.+++..+...... ...
T Consensus 128 ~~~i~~~~~~~~~~~~~~---------------~~~~~~p~~i~-~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~ 191 (270)
T 1rwi_B 128 NNRVVKLAAGSKTQTVLP---------------FTGLNDPDGVA-VDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDI 191 (270)
T ss_dssp GTEEEEECTTCCSCEECC---------------CCSCCSCCCEE-ECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSC
T ss_pred CCEEEEEECCCceeEeec---------------cccCCCceeEE-EeCCCCEEEEECCCCEEEEEecCCCceEeecccCC
Confidence 999999985542 22211 11255799998 688999999999999999999887655432 233
Q ss_pred CCcceEEEEec
Q 014345 178 SFPLGIAVLLA 188 (426)
Q Consensus 178 g~P~GIAv~~g 188 (426)
..|.+|+++..
T Consensus 192 ~~p~~i~~d~~ 202 (270)
T 1rwi_B 192 TAPWGIAVDEA 202 (270)
T ss_dssp CSEEEEEECTT
T ss_pred CCceEEEECCC
Confidence 56889988743
No 22
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.44 E-value=3.4e-12 Score=124.62 Aligned_cols=132 Identities=18% Similarity=0.198 Sum_probs=97.7
Q ss_pred CCceEEEEcC-CCcEEEEECCC-CeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC-CCCEEEE
Q 014345 21 IEPYSVEVLP-GGELLILDSAN-SNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIA 97 (426)
Q Consensus 21 ~~P~GIaVd~-dG~LYVaD~~n-~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~-dG~LYVA 97 (426)
..|.+|++|+ +|.||++|..+ ++|.+++.+|.. ...++.. .|..|+||++|+ ++.||++
T Consensus 120 ~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~---~~~~~~~---------------~~~~P~gla~d~~~~~lY~~ 181 (316)
T 1ijq_A 120 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD---IYSLVTE---------------NIQWPNGITLDLLSGRLYWV 181 (316)
T ss_dssp CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC---EEEEECS---------------SCSCEEEEEEETTTTEEEEE
T ss_pred CCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC---eEEEEEC---------------CCCCceEEEEeccCCEEEEE
Confidence 3899999997 78899999876 899999998632 2223211 277899999996 5789999
Q ss_pred ECCCCEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC-CCceE-e
Q 014345 98 DTMNMAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH-FDDCA-Y 173 (426)
Q Consensus 98 Dt~N~rIrk~d-~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~-~~~~~-~ 173 (426)
|+.+++|.+++ +|. ..+++.. ...+..|.+|++ + ++.||++|+++++|.+++.. +.... .
T Consensus 182 D~~~~~I~~~d~dg~~~~~~~~~--------------~~~~~~P~giav-~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 182 DSKLHSISSIDVNGGNRKTILED--------------EKRLAHPFSLAV-F-EDKVFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp ETTTTEEEEEETTSCSCEEEEEC--------------TTTTSSEEEEEE-E-TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred ECCCCeEEEEecCCCceEEEeec--------------CCccCCcEEEEE-E-CCEEEEEECCCCeEEEEeCCCCcceEEE
Confidence 99999999999 665 4454421 113568999994 5 58999999999999999974 33332 2
Q ss_pred ecCCCCcceEEEE
Q 014345 174 QYGSSFPLGIAVL 186 (426)
Q Consensus 174 ~~~~g~P~GIAv~ 186 (426)
..+...|.||++.
T Consensus 246 ~~~~~~p~~i~v~ 258 (316)
T 1ijq_A 246 AENLLSPEDMVLF 258 (316)
T ss_dssp ECSCSCCCCEEEE
T ss_pred ecCCCCceEEEEe
Confidence 2333456677665
No 23
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.42 E-value=3.1e-12 Score=141.23 Aligned_cols=132 Identities=16% Similarity=0.098 Sum_probs=101.4
Q ss_pred CCceEEEEcCC-CcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCC-CCEEEEE
Q 014345 21 IEPYSVEVLPG-GELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR-GNIYIAD 98 (426)
Q Consensus 21 ~~P~GIaVd~d-G~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~d-G~LYVAD 98 (426)
..|.|||||.. ++||++|..+++|.+++.+|.. ..+++.. .|..|.|||||+. |.||++|
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~---~~~l~~~---------------~l~~P~gIaVDp~~g~LYwtD 532 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK---RKTLFRE---------------NGSKPRAIVVDPVHGFMYWTD 532 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS---EEEEEEC---------------TTCCEEEEEEETTTTEEEEEE
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCe---EEEEEeC---------------CCCCcceEEEecCCCCEEEec
Confidence 37999999975 5899999999999999999632 3344322 2778999999985 8999999
Q ss_pred CCC-CEEEEEc-CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEeec
Q 014345 99 TMN-MAIRKIS-DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQY 175 (426)
Q Consensus 99 t~N-~rIrk~d-~g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~~~~ 175 (426)
.++ ++|.+++ +|.. .++.. ..|.+|.+|++....+.|||+|+++++|.++++++.......
T Consensus 533 ~g~~~~I~~~~~dG~~~~~lv~----------------~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~ 596 (791)
T 3m0c_C 533 WGTPAKIKKGGLNGVDIYSLVT----------------ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL 596 (791)
T ss_dssp CSSSCEEEEEETTSCCEEEEEC----------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred CCCCCeEEEEecCCCceEEEEe----------------CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEe
Confidence 986 8999999 6664 34432 136789999954478999999999999999999886654332
Q ss_pred ----CCCCcceEEEE
Q 014345 176 ----GSSFPLGIAVL 186 (426)
Q Consensus 176 ----~~g~P~GIAv~ 186 (426)
....|.||++.
T Consensus 597 ~~~~~l~~P~glav~ 611 (791)
T 3m0c_C 597 EDEKRLAHPFSLAVF 611 (791)
T ss_dssp ECTTTTSSEEEEEEE
T ss_pred cCCCccCCCCEEEEe
Confidence 23456677764
No 24
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.42 E-value=4.3e-12 Score=136.23 Aligned_cols=133 Identities=12% Similarity=0.122 Sum_probs=105.2
Q ss_pred CceEEEEcC-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCC-CCEEEEEC
Q 014345 22 EPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR-GNIYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~-dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~d-G~LYVADt 99 (426)
.|.|||+|. .++||++|..+++|.+++.+|.. ..+++.. .|+.|++|++|+. |.||++|.
T Consensus 393 ~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~---~~~l~~~---------------~l~~P~~iavdp~~G~ly~tD~ 454 (619)
T 3s94_A 393 HPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM---RKILISE---------------DLEEPRAIVLDPMVGYMYWTDW 454 (619)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEECT---------------TCCSEEEEEEETTTTEEEEEEC
T ss_pred CcCceEEecccCcEEEEeCCCCcEEEEeCCCCe---EEEEEEC---------------CCCCeeeEEEEcCCCcEEEecC
Confidence 899999996 78899999999999999999642 3444321 2889999999984 99999998
Q ss_pred CC-CEEEEEc-CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEe--e
Q 014345 100 MN-MAIRKIS-DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAY--Q 174 (426)
Q Consensus 100 ~N-~rIrk~d-~g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~~--~ 174 (426)
++ .+|.+++ +|.. .++.. ..|.+|++|++...++.||++|+++++|.++++++..... .
T Consensus 455 g~~~~I~r~~~dG~~~~~l~~----------------~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~ 518 (619)
T 3s94_A 455 GEIPKIERAALDGSDRVVLVN----------------TSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVE 518 (619)
T ss_dssp SSSCEEEEEETTSCSCEEEEC----------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEE
T ss_pred CCCCEEEEEccCCCccEEEEe----------------CCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCceEEEec
Confidence 75 8999998 7663 33432 1377899999544688999999999999999998865543 3
Q ss_pred cCCCCcceEEEEec
Q 014345 175 YGSSFPLGIAVLLA 188 (426)
Q Consensus 175 ~~~g~P~GIAv~~g 188 (426)
.....|.|||+..+
T Consensus 519 ~~l~~P~glav~~~ 532 (619)
T 3s94_A 519 DKIPHIFGFTLLGD 532 (619)
T ss_dssp CCCCSSCCEEEETT
T ss_pred cCCCCcEEEEEECC
Confidence 45567999998744
No 25
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.42 E-value=9.3e-12 Score=116.76 Aligned_cols=132 Identities=14% Similarity=0.122 Sum_probs=101.0
Q ss_pred CceEEEEcC-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCC-CCEEEEEC
Q 014345 22 EPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR-GNIYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~-dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~d-G~LYVADt 99 (426)
.|+|+++|+ ++.||++|..+++|.+++.++.. ...++.. .+..|.+|++|++ ++|||+|.
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~---~~~~~~~---------------~~~~p~~ia~d~~~~~lyv~d~ 98 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGE---PTTIIRQ---------------DLGSPEGIALDHLGRTIFWTDS 98 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCC---CEEEECT---------------TCCCEEEEEEETTTTEEEEEET
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCC---cEEEEEC---------------CCCCccEEEEEecCCeEEEEEC
Confidence 689999998 57899999999999999998632 3333311 2668999999984 78999999
Q ss_pred CCCEEEEEc-CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECC-CCeEEEEECC--CCeEEEEEcCCCceEee
Q 014345 100 MNMAIRKIS-DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGS-SCSLLVIDRG--NRAIREIQLHFDDCAYQ 174 (426)
Q Consensus 100 ~N~rIrk~d-~g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~-~G~LYVaDsg--N~rIr~I~l~~~~~~~~ 174 (426)
.+++|.+++ ++.. .++... .+..|.+|+ +++ .+.|||+|.+ +++|.++++++......
T Consensus 99 ~~~~I~~~~~~g~~~~~~~~~----------------~~~~P~~i~-vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~ 161 (267)
T 1npe_A 99 QLDRIEVAKMDGTQRRVLFDT----------------GLVNPRGIV-TDPVRGNLYWTDWNRDNPKIETSHMDGTNRRIL 161 (267)
T ss_dssp TTTEEEEEETTSCSCEEEECS----------------SCSSEEEEE-EETTTTEEEEEECCSSSCEEEEEETTSCCCEEE
T ss_pred CCCEEEEEEcCCCCEEEEEEC----------------CCCCccEEE-EeeCCCEEEEEECCCCCcEEEEEecCCCCcEEE
Confidence 999999999 6553 333321 245799999 455 7999999987 78999999887544322
Q ss_pred --cCCCCcceEEEEec
Q 014345 175 --YGSSFPLGIAVLLA 188 (426)
Q Consensus 175 --~~~g~P~GIAv~~g 188 (426)
.....|.|||++..
T Consensus 162 ~~~~~~~P~gia~d~~ 177 (267)
T 1npe_A 162 AQDNLGLPNGLTFDAF 177 (267)
T ss_dssp ECTTCSCEEEEEEETT
T ss_pred EECCCCCCcEEEEcCC
Confidence 34567999999853
No 26
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.41 E-value=1.9e-11 Score=114.34 Aligned_cols=135 Identities=16% Similarity=0.299 Sum_probs=102.0
Q ss_pred CCceEEEE-cCCCcEEEEECC-CCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEE
Q 014345 21 IEPYSVEV-LPGGELLILDSA-NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIAD 98 (426)
Q Consensus 21 ~~P~GIaV-d~dG~LYVaD~~-n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVAD 98 (426)
..|.+|++ +++|+|||++.. +++|++++.++. .....+. ..+..|.+|+++++|+|||+|
T Consensus 77 ~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~----~~~~~~~--------------~~~~~~~~i~~~~~g~l~v~~ 138 (286)
T 1q7f_A 77 LYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQ----FVRKFGA--------------TILQHPRGVTVDNKGRIIVVE 138 (286)
T ss_dssp SSEEEEEEETTTTEEEEEECGGGCEEEEECTTSC----EEEEECT--------------TTCSCEEEEEECTTSCEEEEE
T ss_pred cCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCc----EEEEecC--------------ccCCCceEEEEeCCCCEEEEE
Confidence 47999999 579999999975 889999997742 2222221 125679999999999999999
Q ss_pred CCCCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEeecC-
Q 014345 99 TMNMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQYG- 176 (426)
Q Consensus 99 t~N~rIrk~d-~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~~~~~- 176 (426)
..+++|.+++ ++......+. ...+..|.+|+ ++++|+|||+|..+++|++++..+........
T Consensus 139 ~~~~~i~~~~~~g~~~~~~~~--------------~~~~~~p~~i~-~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~ 203 (286)
T 1q7f_A 139 CKVMRVIIFDQNGNVLHKFGC--------------SKHLEFPNGVV-VNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGE 203 (286)
T ss_dssp TTTTEEEEECTTSCEEEEEEC--------------TTTCSSEEEEE-ECSSSEEEEEEGGGTEEEEEETTCCEEEEESCT
T ss_pred CCCCEEEEEcCCCCEEEEeCC--------------CCccCCcEEEE-ECCCCCEEEEECCCCEEEEEcCCCCEEEEEccC
Confidence 9999999999 5554333321 01355799998 78899999999999999999987654433322
Q ss_pred --CCCcceEEEEec
Q 014345 177 --SSFPLGIAVLLA 188 (426)
Q Consensus 177 --~g~P~GIAv~~g 188 (426)
...|.+|+++..
T Consensus 204 g~~~~p~~i~~d~~ 217 (286)
T 1q7f_A 204 GITNYPIGVGINSN 217 (286)
T ss_dssp TTSCSEEEEEECTT
T ss_pred CccCCCcEEEECCC
Confidence 256899998843
No 27
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.41 E-value=8.8e-12 Score=126.34 Aligned_cols=138 Identities=17% Similarity=0.108 Sum_probs=103.6
Q ss_pred CCceEEEEcC-CCcEEEEECCCCeEEEEeCCCCcc-cccEEEecCCCCcccccCCcccccccCCcceEEEcC-CCCEEEE
Q 014345 21 IEPYSVEVLP-GGELLILDSANSNLYRISSSLSLY-SRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIA 97 (426)
Q Consensus 21 ~~P~GIaVd~-dG~LYVaD~~n~rI~kid~dg~~~-g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~-dG~LYVA 97 (426)
..|.+|++++ ++.||++|..+++|++++.++... +....++.. .+..|.|||+|. .++||++
T Consensus 112 ~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~---------------~~~~p~glavD~~~~~lY~~ 176 (400)
T 3p5b_L 112 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR---------------DIQAPDGLAVDWIHSNIYWT 176 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECS---------------SCSCEEEEEEETTTTEEEEE
T ss_pred CcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeC---------------CCCCcccEEEEecCCceEEE
Confidence 3799999997 678999999999999999985210 123334332 267899999997 7899999
Q ss_pred ECCCCEEEEEc-CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECC-CCeEEEEEcCCCceEee
Q 014345 98 DTMNMAIRKIS-DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRG-NRAIREIQLHFDDCAYQ 174 (426)
Q Consensus 98 Dt~N~rIrk~d-~g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsg-N~rIr~I~l~~~~~~~~ 174 (426)
|..+++|.+++ +|.. .++.. ..+..|.+|++....|.||++|++ +++|.++++++......
T Consensus 177 d~~~~~I~~~~~~g~~~~~l~~----------------~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~ 240 (400)
T 3p5b_L 177 DSVLGTVSVADTKGVKRKTLFR----------------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 240 (400)
T ss_dssp ETTTTEEEEECTTTCSEEEEEE----------------CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEE
T ss_pred ECCCCeEEEEeCCCCceEEEEe----------------CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEE
Confidence 99999999999 6664 34432 135679999954458899999987 58999999998655432
Q ss_pred --cCCCCcceEEEEecC
Q 014345 175 --YGSSFPLGIAVLLAA 189 (426)
Q Consensus 175 --~~~g~P~GIAv~~g~ 189 (426)
.....|.|||++...
T Consensus 241 ~~~~l~~P~glavd~~~ 257 (400)
T 3p5b_L 241 VTENIQWPNGITLDLLS 257 (400)
T ss_dssp ECSSCSCEEEEEEETTT
T ss_pred EECCCCceEEEEEEeCC
Confidence 445689999999543
No 28
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.40 E-value=1e-11 Score=114.39 Aligned_cols=133 Identities=19% Similarity=0.321 Sum_probs=99.3
Q ss_pred CCceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECC
Q 014345 21 IEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 100 (426)
Q Consensus 21 ~~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~ 100 (426)
..|.+|+++++|+|||+|..+++|++++.... ... ... ...+..|.+|+++++|+|||+|..
T Consensus 108 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~---~~~-~~~--------------~~~~~~p~~i~~~~~g~l~v~~~~ 169 (270)
T 1rwi_B 108 NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSK---TQT-VLP--------------FTGLNDPDGVAVDNSGNVYVTDTD 169 (270)
T ss_dssp SSEEEEEECTTCCEEEEEGGGTEEEEECTTCC---SCE-ECC--------------CCSCCSCCCEEECTTCCEEEEEGG
T ss_pred CCCcceEECCCCCEEEEECCCCEEEEEECCCc---eeE-eec--------------cccCCCceeEEEeCCCCEEEEECC
Confidence 37999999999999999999999999965421 111 110 012667999999999999999999
Q ss_pred CCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEeec--CC
Q 014345 101 NMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQY--GS 177 (426)
Q Consensus 101 N~rIrk~d-~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~~~~--~~ 177 (426)
+++|.+++ ++....... ...+..|.+|+ ++++|+|||++..+++|.++++.+....... +.
T Consensus 170 ~~~i~~~~~~~~~~~~~~---------------~~~~~~p~~i~-~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~ 233 (270)
T 1rwi_B 170 NNRVVKLEAESNNQVVLP---------------FTDITAPWGIA-VDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGL 233 (270)
T ss_dssp GTEEEEECTTTCCEEECC---------------CSSCCSEEEEE-ECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSC
T ss_pred CCEEEEEecCCCceEeec---------------ccCCCCceEEE-ECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCC
Confidence 99999999 444322211 01245789998 7889999999999999999998876544332 23
Q ss_pred CCcceEEEEe
Q 014345 178 SFPLGIAVLL 187 (426)
Q Consensus 178 g~P~GIAv~~ 187 (426)
..|.+|+++.
T Consensus 234 ~~p~~i~~~~ 243 (270)
T 1rwi_B 234 NTPLAVAVDS 243 (270)
T ss_dssp SCEEEEEECT
T ss_pred CCceeEEECC
Confidence 4688888873
No 29
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.38 E-value=1.2e-11 Score=136.49 Aligned_cols=137 Identities=18% Similarity=0.110 Sum_probs=103.0
Q ss_pred CceEEEEcC-CCcEEEEECCCCeEEEEeCCCCcc-cccEEEecCCCCcccccCCcccccccCCcceEEEcCC-CCEEEEE
Q 014345 22 EPYSVEVLP-GGELLILDSANSNLYRISSSLSLY-SRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR-GNIYIAD 98 (426)
Q Consensus 22 ~P~GIaVd~-dG~LYVaD~~n~rI~kid~dg~~~-g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~d-G~LYVAD 98 (426)
.|.+|+++. ++.||++|..+++|++++.++... +....++.. .|..|.|||||.. ++||++|
T Consensus 425 ~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~---------------~l~~P~GLAvD~~~~~LY~tD 489 (791)
T 3m0c_C 425 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR---------------DIQAPDGLAVDWIHSNIYWTD 489 (791)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECS---------------SCSCCCEEEEETTTTEEEEEE
T ss_pred ceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEec---------------CCCCcceeeeeecCCcEEEEe
Confidence 799999998 678999999999999999985321 123444432 2778999999975 5899999
Q ss_pred CCCCEEEEEc-CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCC-CeEEEEEcCCCceEee-
Q 014345 99 TMNMAIRKIS-DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGN-RAIREIQLHFDDCAYQ- 174 (426)
Q Consensus 99 t~N~rIrk~d-~g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN-~rIr~I~l~~~~~~~~- 174 (426)
..+++|++++ +|.. .+++. ..|..|.+|++....|.||++|+++ ++|.++++++......
T Consensus 490 ~~~~~I~v~~ldG~~~~~l~~----------------~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv 553 (791)
T 3m0c_C 490 SVLGTVSVADTKGVKRKTLFR----------------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 553 (791)
T ss_dssp TTTTEEEEEETTSSSEEEEEE----------------CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE
T ss_pred cCCCeEEEEeCCCCeEEEEEe----------------CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEE
Confidence 9999999999 6664 44432 1356799999544468999999987 9999999998765443
Q ss_pred -cCCCCcceEEEEecC
Q 014345 175 -YGSSFPLGIAVLLAA 189 (426)
Q Consensus 175 -~~~g~P~GIAv~~g~ 189 (426)
.....|.|||++...
T Consensus 554 ~~~l~~P~GLavD~~~ 569 (791)
T 3m0c_C 554 TENIQWPNGITLDLLS 569 (791)
T ss_dssp CSSCSCEEEEEEETTT
T ss_pred eCCCCCceEEEEecCC
Confidence 344679999999443
No 30
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.37 E-value=1.7e-11 Score=131.87 Aligned_cols=131 Identities=15% Similarity=0.134 Sum_probs=103.7
Q ss_pred CceEEEEcC-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC-CCCEEEEEC
Q 014345 22 EPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~-dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~-dG~LYVADt 99 (426)
.|.|||+|. .|+||++|..+++|.+++.+|.. ..+++.. .|..|.+|++|+ +|.||++|.
T Consensus 81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~---~~~l~~~---------------~l~~P~~iavdp~~G~lY~tD~ 142 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH---RQVLVWK---------------DLDSPRALALDPAEGFMYWTEW 142 (628)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSTT---CEEEECS---------------SCCCEEEEEEETTTTEEEEEEC
T ss_pred CcceEEEEeCCCEEEEEECCCCEEEEEecCCCc---EEEEEeC---------------CCCCcccEEEccCCCeEEEeCC
Confidence 799999997 67899999999999999999642 3333321 278899999997 799999998
Q ss_pred C-CCEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEe-ec
Q 014345 100 M-NMAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAY-QY 175 (426)
Q Consensus 100 ~-N~rIrk~d-~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~~-~~ 175 (426)
+ +.+|.+++ +|. ..+++. .+.+|.+|++....+.||++|..+++|.++++++..... ..
T Consensus 143 g~~~~I~r~~~dG~~~~~l~~-----------------~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~ 205 (628)
T 4a0p_A 143 GGKPKIDRAAMDGSERTTLVP-----------------NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIAD 205 (628)
T ss_dssp SSSCEEEEEETTSCSCEEEEC-----------------SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEE
T ss_pred CCCCEEEEEeCCCCceEEEEC-----------------CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeec
Confidence 7 78999999 666 445542 256899999544578999999999999999998754433 34
Q ss_pred CCCCcceEEEEe
Q 014345 176 GSSFPLGIAVLL 187 (426)
Q Consensus 176 ~~g~P~GIAv~~ 187 (426)
....|.|||++.
T Consensus 206 ~l~~P~glav~~ 217 (628)
T 4a0p_A 206 DLPHPFGLTQYQ 217 (628)
T ss_dssp CCSCEEEEEEET
T ss_pred cCCCceEEEEEC
Confidence 456799999974
No 31
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.35 E-value=1.1e-10 Score=108.21 Aligned_cols=134 Identities=16% Similarity=0.214 Sum_probs=102.0
Q ss_pred CCceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECC
Q 014345 21 IEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 100 (426)
Q Consensus 21 ~~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~ 100 (426)
..|++|+++++|+|||++..+++|++++.++ ....+... ..+..|.+|++|++|+|||++..
T Consensus 146 ~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g----~~~~~~~~--------------~~~~~~~~i~~d~~g~l~v~~~~ 207 (300)
T 2qc5_A 146 SYPAFITLGSDNALWFTENQNNSIGRITNTG----KLEEYPLP--------------TNAAAPVGITSGNDGALWFVEIM 207 (300)
T ss_dssp CCEEEEEECTTSSEEEEETTTTEEEEECTTC----CEEEEECS--------------STTCCEEEEEECTTSSEEEEETT
T ss_pred CCceeEEECCCCCEEEEecCCCeEEEECCCC----cEEEeeCC--------------CCCCCcceEEECCCCCEEEEccC
Confidence 4799999999999999999999999999863 33333211 12567999999999999999999
Q ss_pred CCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEee--cCC
Q 014345 101 NMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQ--YGS 177 (426)
Q Consensus 101 N~rIrk~d-~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~~~--~~~ 177 (426)
+++|.+++ ++.+..+... ..+..|.+|+ ++++|+|||++.++++|.++++.+....+. ...
T Consensus 208 ~~~i~~~~~~g~~~~~~~~---------------~~~~~~~~i~-~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~ 271 (300)
T 2qc5_A 208 GNKIGRITTTGEISEYDIP---------------TPNARPHAIT-AGKNSEIWFTEWGANQIGRITNDNTIQEYQLQTEN 271 (300)
T ss_dssp TTEEEEECTTCCEEEEECS---------------STTCCEEEEE-ECSTTCEEEEETTTTEEEEECTTSCEEEEECCSTT
T ss_pred CCEEEEEcCCCcEEEEECC---------------CCCCCceEEE-ECCCCCEEEeccCCCeEEEECCCCcEEEEECCccC
Confidence 99999999 5555444221 1245789998 788999999999999999999865333332 234
Q ss_pred CCcceEEEEec
Q 014345 178 SFPLGIAVLLA 188 (426)
Q Consensus 178 g~P~GIAv~~g 188 (426)
..|.+|+++..
T Consensus 272 ~~~~~i~~~~~ 282 (300)
T 2qc5_A 272 AEPHGITFGKD 282 (300)
T ss_dssp CCCCCEEECTT
T ss_pred CccceeEeCCC
Confidence 56889988743
No 32
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.34 E-value=1.9e-11 Score=131.57 Aligned_cols=134 Identities=15% Similarity=0.159 Sum_probs=104.8
Q ss_pred CCceEEEEcCC-CcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC-CCCEEEEE
Q 014345 21 IEPYSVEVLPG-GELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIAD 98 (426)
Q Consensus 21 ~~P~GIaVd~d-G~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~-dG~LYVAD 98 (426)
..|.|||+|.. ++||++|..+++|.+++.+|.. ..+++.. .|+.|++|++|+ +|.||++|
T Consensus 389 ~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G~~---~~~l~~~---------------~l~~Pr~iavdp~~g~ly~tD 450 (628)
T 4a0p_A 389 IQPYDLSIDIYSRYIYWTCEATNVINVTRLDGRS---VGVVLKG---------------EQDRPRAVVVNPEKGYMYFTN 450 (628)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCE---EEEEEEC---------------TTCCEEEEEEETTTTEEEEEE
T ss_pred CCcceEEeeccCCeEEEEcCCCCEEEEEECCCCe---EEEEEeC---------------CCCceeeEEEecCCCeEEEee
Confidence 37999999985 6799999999999999998632 2233211 277899999999 89999999
Q ss_pred CCCC--EEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEee
Q 014345 99 TMNM--AIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQ 174 (426)
Q Consensus 99 t~N~--rIrk~d-~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~~~ 174 (426)
.+++ +|.+++ +|. ..++... .+.+|++|++....++||++|..+++|.++++++......
T Consensus 451 ~g~~~~~I~r~~~dG~~~~~l~~~----------------~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~r~~~ 514 (628)
T 4a0p_A 451 LQERSPKIERAALDGTEREVLFFS----------------GLSKPIALALDSRLGKLFWADSDLRRIESSDLSGANRIVL 514 (628)
T ss_dssp EETTEEEEEEEETTSCSCEEEECS----------------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred cCCCCCeEEEEeCCCCCcEEEEec----------------cCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCceEEE
Confidence 9877 799999 776 4444321 3678999995445689999999999999999988665443
Q ss_pred --cCCCCcceEEEEec
Q 014345 175 --YGSSFPLGIAVLLA 188 (426)
Q Consensus 175 --~~~g~P~GIAv~~g 188 (426)
.....|.|||+..+
T Consensus 515 ~~~~~~~P~glav~~~ 530 (628)
T 4a0p_A 515 EDSNILQPVGLTVFEN 530 (628)
T ss_dssp ECSSCSCEEEEEEETT
T ss_pred EcCCCCCcEEEEEECC
Confidence 34567999998743
No 33
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.33 E-value=5.4e-11 Score=127.74 Aligned_cols=134 Identities=19% Similarity=0.230 Sum_probs=105.7
Q ss_pred CceEEEEcC-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC-CCCEEEEEC
Q 014345 22 EPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~-dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~-dG~LYVADt 99 (426)
.|.+|++|+ +|.||++|..+++|++++.+|+ ...+++.. .+..|.|||+|. .++||++|.
T Consensus 350 ~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~---~~~~v~~~---------------~~~~p~GlAvD~~~~~lY~tD~ 411 (619)
T 3s94_A 350 HAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGS---GSQFVVTA---------------QIAHPDGIAVDWVARNLYWTDT 411 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEECS---------------SCSCCCEEEEETTTTEEEEEET
T ss_pred ccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCC---ccEEEEEC---------------CCCCcCceEEecccCcEEEEeC
Confidence 799999998 7889999999999999999863 33444422 267899999995 788999999
Q ss_pred CCCEEEEEc-CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCC-CeEEEEEcCCCceEe--e
Q 014345 100 MNMAIRKIS-DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGN-RAIREIQLHFDDCAY--Q 174 (426)
Q Consensus 100 ~N~rIrk~d-~g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN-~rIr~I~l~~~~~~~--~ 174 (426)
.+++|.+++ +|.. .++.. ..|..|.+|++.+..|.||++|+++ .+|.++.+++..... .
T Consensus 412 ~~~~I~v~~~~G~~~~~l~~----------------~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~ 475 (619)
T 3s94_A 412 GTDRIEVTRLNGTMRKILIS----------------EDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVN 475 (619)
T ss_dssp TTTEEEEEETTSCSCEEEEC----------------TTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred CCCcEEEEeCCCCeEEEEEE----------------CCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEe
Confidence 999999999 6664 44432 1377899999544469999999875 899999998865443 3
Q ss_pred cCCCCcceEEEEecC
Q 014345 175 YGSSFPLGIAVLLAA 189 (426)
Q Consensus 175 ~~~g~P~GIAv~~g~ 189 (426)
.....|.|||++...
T Consensus 476 ~~l~~P~GlalD~~~ 490 (619)
T 3s94_A 476 TSLGWPNGLALDYDE 490 (619)
T ss_dssp SSCSCEEEEEEETTT
T ss_pred CCCCCCeeeEEcccC
Confidence 346789999999543
No 34
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.29 E-value=3.6e-11 Score=116.00 Aligned_cols=133 Identities=18% Similarity=0.158 Sum_probs=97.0
Q ss_pred CceEEEEcC-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC-CCCEEEEEC
Q 014345 22 EPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~-dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~-dG~LYVADt 99 (426)
.|.||++++ +|+|||+|.. +.|++++.++ +.+..++... .+ ..++.|++|++|+ +|+|||+|.
T Consensus 81 ~p~gi~~~~~~g~l~v~d~~-~~i~~~d~~~---g~~~~~~~~~-------~~----~~~~~p~~i~~d~~~G~l~v~d~ 145 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYIVDCY-YHLSVVGSEG---GHATQLATSV-------DG----VPFKWLYAVTVDQRTGIVYFTDV 145 (322)
T ss_dssp CEEEEEEETTTTEEEEEETT-TEEEEECTTC---EECEEEESEE-------TT----EECSCEEEEEECTTTCCEEEEES
T ss_pred CCceEEEcCCCCcEEEEECC-CCEEEEeCCC---CEEEEecccC-------CC----CcccccceEEEecCCCEEEEECC
Confidence 699999997 8999999976 5699999874 4455554321 11 2478899999999 999999997
Q ss_pred CC-----------------CEEEEEc-C-CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECCCC
Q 014345 100 MN-----------------MAIRKIS-D-SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRGNR 159 (426)
Q Consensus 100 ~N-----------------~rIrk~d-~-g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaDsgN~ 159 (426)
.+ ++|.+++ + +.+..+.. .+..|++|+ ++++| .|||+|+.++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-----------------~~~~p~gia-~~~dg~~lyv~d~~~~ 207 (322)
T 2fp8_A 146 STLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK-----------------ELHVPGGAE-VSADSSFVLVAEFLSH 207 (322)
T ss_dssp CSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE-----------------EESCCCEEE-ECTTSSEEEEEEGGGT
T ss_pred cccccccccceehcccCCCceEEEEeCCCCEEEEecc-----------------CCccCcceE-ECCCCCEEEEEeCCCC
Confidence 63 5788888 3 33444332 255799999 67776 5999999999
Q ss_pred eEEEEEcCCC---ce-EeecCCCCcceEEEEec
Q 014345 160 AIREIQLHFD---DC-AYQYGSSFPLGIAVLLA 188 (426)
Q Consensus 160 rIr~I~l~~~---~~-~~~~~~g~P~GIAv~~g 188 (426)
+|+++++.+. .. .+....+ |.||+++..
T Consensus 208 ~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~ 239 (322)
T 2fp8_A 208 QIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNAD 239 (322)
T ss_dssp EEEEEESSSTTTTCEEEEEECSS-EEEEEECTT
T ss_pred eEEEEECCCCcCCccceEEeCCC-CCCeEECCC
Confidence 9999998752 11 1112234 999999854
No 35
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.29 E-value=3.9e-10 Score=104.42 Aligned_cols=134 Identities=11% Similarity=0.136 Sum_probs=101.4
Q ss_pred CCceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECC
Q 014345 21 IEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 100 (426)
Q Consensus 21 ~~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~ 100 (426)
..|++|+++++|+|||++..++.|.+++.++ .+..+.-. ..+..|.+|++|++|+|||++..
T Consensus 104 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g----~~~~~~~~--------------~~~~~~~~i~~d~~g~l~v~~~~ 165 (300)
T 2qc5_A 104 SGPYGITEGLNGDIWFTQLNGDRIGKLTADG----TIYEYDLP--------------NKGSYPAFITLGSDNALWFTENQ 165 (300)
T ss_dssp CCEEEEEECSTTCEEEEETTTTEEEEECTTS----CEEEEECS--------------STTCCEEEEEECTTSSEEEEETT
T ss_pred CCCccceECCCCCEEEEccCCCeEEEECCCC----CEEEccCC--------------CCCCCceeEEECCCCCEEEEecC
Confidence 4799999999999999999899999999873 33333211 01457999999999999999999
Q ss_pred CCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEee--cCC
Q 014345 101 NMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQ--YGS 177 (426)
Q Consensus 101 N~rIrk~d-~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~~~--~~~ 177 (426)
++.|.+++ ++.+..+... ..+..|.+|+ ++++|+|||++..+++|.+++..+....+. ...
T Consensus 166 ~~~i~~~~~~g~~~~~~~~---------------~~~~~~~~i~-~d~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~ 229 (300)
T 2qc5_A 166 NNSIGRITNTGKLEEYPLP---------------TNAAAPVGIT-SGNDGALWFVEIMGNKIGRITTTGEISEYDIPTPN 229 (300)
T ss_dssp TTEEEEECTTCCEEEEECS---------------STTCCEEEEE-ECTTSSEEEEETTTTEEEEECTTCCEEEEECSSTT
T ss_pred CCeEEEECCCCcEEEeeCC---------------CCCCCcceEE-ECCCCCEEEEccCCCEEEEEcCCCcEEEEECCCCC
Confidence 99999999 5555544321 1245789998 688999999999999999999854433332 234
Q ss_pred CCcceEEEEec
Q 014345 178 SFPLGIAVLLA 188 (426)
Q Consensus 178 g~P~GIAv~~g 188 (426)
..|.+|+++..
T Consensus 230 ~~~~~i~~d~~ 240 (300)
T 2qc5_A 230 ARPHAITAGKN 240 (300)
T ss_dssp CCEEEEEECST
T ss_pred CCceEEEECCC
Confidence 56888888744
No 36
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.27 E-value=9.1e-12 Score=135.35 Aligned_cols=134 Identities=16% Similarity=0.118 Sum_probs=100.3
Q ss_pred CCceEEEEcC-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC-CCCEEEEE
Q 014345 21 IEPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIAD 98 (426)
Q Consensus 21 ~~P~GIaVd~-dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~-dG~LYVAD 98 (426)
..|.||||+. .|+|||+|..+++|.+++.+|. ...+++.. .+..|+||++|+ .|.||++|
T Consensus 453 ~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~---~~~~l~~~---------------~~~~P~giavDp~~g~ly~td 514 (699)
T 1n7d_A 453 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV---KRKTLFRE---------------QGSKPRAIVVDPVHGFMYWTD 514 (699)
T ss_dssp --CCCEECCCSSSBCEECCTTTSCEEEEBSSSC---CEEEECCC---------------SSCCCCCEECCSSSSCCEECC
T ss_pred CCcceEEEEeeCCcEEEEeccCCeEEEEecCCC---ceEEEEeC---------------CCCCcceEEEccCCCcEEEcc
Confidence 3799999995 7889999999999999999853 23333321 267899999998 57899999
Q ss_pred CCC-CEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEEC-CCCeEEEEECCCCeEEEEEcCCCceEeec
Q 014345 99 TMN-MAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIG-SSCSLLVIDRGNRAIREIQLHFDDCAYQY 175 (426)
Q Consensus 99 t~N-~rIrk~d-~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd-~~G~LYVaDsgN~rIr~I~l~~~~~~~~~ 175 (426)
.++ ++|.+++ +|...++... ..|..|++|+ ++ ..+.|||+|+.+++|.++++++.......
T Consensus 515 ~~~~~~I~~~~~dG~~~~~l~~---------------~~l~~PnGla-vd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~ 578 (699)
T 1n7d_A 515 WGTPAKIKKGGLNGVDIYSLVT---------------ENIQWPNGIT-LDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL 578 (699)
T ss_dssp CSSSCCEEBCCSSSCCCCEESC---------------SSCSSCCCEE-ECTTTCCEEEEETTTTEEEEECSSSSCCEEEC
T ss_pred cCCCCeEEEEeCCCCCeeEEEe---------------CCCCCccEEE-EeccCCEEEEEecCCCeEEEEccCCCceEEEE
Confidence 876 8999998 6553322221 1367899999 56 56899999999999999999875443322
Q ss_pred ----CCCCcceEEEEec
Q 014345 176 ----GSSFPLGIAVLLA 188 (426)
Q Consensus 176 ----~~g~P~GIAv~~g 188 (426)
....|.||+++..
T Consensus 579 ~~~~~~~~P~glavd~~ 595 (699)
T 1n7d_A 579 EDEKRLAHPFSLAVFED 595 (699)
T ss_dssp CCSSSCSSCCCCEEETT
T ss_pred ecCCcCCCceEeEEECC
Confidence 3467999999744
No 37
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.27 E-value=1.9e-10 Score=108.48 Aligned_cols=148 Identities=16% Similarity=0.122 Sum_probs=109.6
Q ss_pred cCCcEEEEEecCCCCCCCceEEEEcCCCc-EEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCc
Q 014345 5 ESGYTVETVFDGSKLGIEPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHP 83 (426)
Q Consensus 5 ~~G~tv~tv~~g~~l~~~P~GIaVd~dG~-LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P 83 (426)
.++..++.+..+.. .|.|++++++|+ ||+++..+++|++++.++ + ...+... ...|
T Consensus 15 ~~~~~~~~l~~~~~---~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~---~-~~~~~~~----------------~~~~ 71 (296)
T 3e5z_A 15 PAGAEARRLADGFT---WTEGPVYVPARSAVIFSDVRQNRTWAWSDDG---Q-LSPEMHP----------------SHHQ 71 (296)
T ss_dssp CTTCCCEEEECCCS---SEEEEEEEGGGTEEEEEEGGGTEEEEEETTS---C-EEEEESS----------------CSSE
T ss_pred CCCCcEEEEecCCc---cccCCeEeCCCCEEEEEeCCCCEEEEEECCC---C-eEEEECC----------------CCCc
Confidence 34566677776544 689999999998 999999999999999985 2 3344321 2358
Q ss_pred ceEEEcCCCCEEEEECCCCEEEEEc--CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEEC-----
Q 014345 84 KGLTVDDRGNIYIADTMNMAIRKIS--DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDR----- 156 (426)
Q Consensus 84 ~GIaVd~dG~LYVADt~N~rIrk~d--~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDs----- 156 (426)
.+|+++++|+|||++..+++|.+++ ++.+..+..... ...+..|.+|+ ++++|+|||+|.
T Consensus 72 ~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~------------~~~~~~~~~i~-~d~~G~l~vtd~~~g~~ 138 (296)
T 3e5z_A 72 NGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFE------------GKKLNSPNDVC-LAPDGSLWFSDPTYGID 138 (296)
T ss_dssp EEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEET------------TEECCCCCCEE-ECTTSCEEEEECSHHHH
T ss_pred ceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccC------------CCCCCCCCCEE-ECCCCCEEEECCccccc
Confidence 9999999999999999989999999 455655543211 12356789998 689999999975
Q ss_pred ------------CCCeEEEEEcCCCceEeecCCCCcceEEEEec
Q 014345 157 ------------GNRAIREIQLHFDDCAYQYGSSFPLGIAVLLA 188 (426)
Q Consensus 157 ------------gN~rIr~I~l~~~~~~~~~~~g~P~GIAv~~g 188 (426)
..+.|.+++..+...........|.||++...
T Consensus 139 ~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~gi~~s~d 182 (296)
T 3e5z_A 139 KPEEGYGGEMELPGRWVFRLAPDGTLSAPIRDRVKPNGLAFLPS 182 (296)
T ss_dssp CGGGSSCCCCCSSSCEEEEECTTSCEEEEECCCSSEEEEEECTT
T ss_pred cccccccccccCCCcEEEEECCCCCEEEeecCCCCCccEEECCC
Confidence 24689999887443344455667888887643
No 38
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.22 E-value=1.4e-09 Score=100.55 Aligned_cols=135 Identities=15% Similarity=0.211 Sum_probs=100.3
Q ss_pred CCCceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEEC
Q 014345 20 GIEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADT 99 (426)
Q Consensus 20 ~~~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt 99 (426)
...|.+|+++++|.|||++..++.|.+++.++ ....+... .....|.+|++|++|+|||++.
T Consensus 98 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g----~~~~~~~~--------------~~~~~~~~i~~~~~g~l~v~~~ 159 (299)
T 2z2n_A 98 DSAPYGITEGPNGDIWFTEMNGNRIGRITDDG----KIREYELP--------------NKGSYPSFITLGSDNALWFTEN 159 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTC----CEEEEECS--------------STTCCEEEEEECTTSCEEEEET
T ss_pred CCCceeeEECCCCCEEEEecCCceEEEECCCC----CEEEecCC--------------CCCCCCceEEEcCCCCEEEEeC
Confidence 34799999999999999999899999999853 33333211 0145699999999999999999
Q ss_pred CCCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEeec--C
Q 014345 100 MNMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQY--G 176 (426)
Q Consensus 100 ~N~rIrk~d-~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~~~~--~ 176 (426)
.++.|.+++ ++.+..+... ..+..|.+|+ ++++|.|||++..++.|.++++.+....+.. .
T Consensus 160 ~~~~i~~~~~~g~~~~~~~~---------------~~~~~~~~i~-~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~ 223 (299)
T 2z2n_A 160 QNNAIGRITESGDITEFKIP---------------TPASGPVGIT-KGNDDALWFVEIIGNKIGRITTSGEITEFKIPTP 223 (299)
T ss_dssp TTTEEEEECTTCCEEEEECS---------------STTCCEEEEE-ECTTSSEEEEETTTTEEEEECTTCCEEEEECSST
T ss_pred CCCEEEEEcCCCcEEEeeCC---------------CCCCcceeEE-ECCCCCEEEEccCCceEEEECCCCcEEEEECCCC
Confidence 899999999 5555544221 1244688998 6888999999999999999998443222211 2
Q ss_pred CCCcceEEEEec
Q 014345 177 SSFPLGIAVLLA 188 (426)
Q Consensus 177 ~g~P~GIAv~~g 188 (426)
...|.+|+++..
T Consensus 224 ~~~~~~i~~~~~ 235 (299)
T 2z2n_A 224 NARPHAITAGAG 235 (299)
T ss_dssp TCCEEEEEECST
T ss_pred CCCceeEEECCC
Confidence 356888888743
No 39
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.21 E-value=1.6e-09 Score=100.25 Aligned_cols=131 Identities=16% Similarity=0.209 Sum_probs=98.0
Q ss_pred CCceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECC
Q 014345 21 IEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 100 (426)
Q Consensus 21 ~~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~ 100 (426)
..|.+|+++++|+|||++..++.|.+++.+ +++..+... ..+..|.+|++|++|+|||++..
T Consensus 141 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~----g~~~~~~~~--------------~~~~~~~~i~~~~~g~l~v~~~~ 202 (299)
T 2z2n_A 141 SYPSFITLGSDNALWFTENQNNAIGRITES----GDITEFKIP--------------TPASGPVGITKGNDDALWFVEII 202 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT----CCEEEEECS--------------STTCCEEEEEECTTSSEEEEETT
T ss_pred CCCceEEEcCCCCEEEEeCCCCEEEEEcCC----CcEEEeeCC--------------CCCCcceeEEECCCCCEEEEccC
Confidence 479999999999999999988999999985 344433211 11557999999999999999998
Q ss_pred CCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEee--cCC
Q 014345 101 NMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQ--YGS 177 (426)
Q Consensus 101 N~rIrk~d-~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~~~--~~~ 177 (426)
++.|.+++ ++.+..+... ..+..|.+|+ ++++|+|||++..+++|.++++.+.-..+. ...
T Consensus 203 ~~~i~~~~~~g~~~~~~~~---------------~~~~~~~~i~-~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~ 266 (299)
T 2z2n_A 203 GNKIGRITTSGEITEFKIP---------------TPNARPHAIT-AGAGIDLWFTEWGANKIGRLTSNNIIEEYPIQIKS 266 (299)
T ss_dssp TTEEEEECTTCCEEEEECS---------------STTCCEEEEE-ECSTTCEEEEETTTTEEEEEETTTEEEEEECSSSS
T ss_pred CceEEEECCCCcEEEEECC---------------CCCCCceeEE-ECCCCCEEEeccCCceEEEECCCCceEEEeCCCCC
Confidence 99999999 5555444221 1245689998 688999999999999999999854322221 223
Q ss_pred CCcceEEE
Q 014345 178 SFPLGIAV 185 (426)
Q Consensus 178 g~P~GIAv 185 (426)
..|.++++
T Consensus 267 ~~~~~i~~ 274 (299)
T 2z2n_A 267 AEPHGICF 274 (299)
T ss_dssp CCEEEEEE
T ss_pred CccceEEe
Confidence 45777777
No 40
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.21 E-value=6.7e-11 Score=128.54 Aligned_cols=114 Identities=19% Similarity=0.224 Sum_probs=88.0
Q ss_pred CCceEEEEcC-CCcEEEEECCC-CeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCC-CCEEEE
Q 014345 21 IEPYSVEVLP-GGELLILDSAN-SNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR-GNIYIA 97 (426)
Q Consensus 21 ~~P~GIaVd~-dG~LYVaD~~n-~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~d-G~LYVA 97 (426)
..|.+|+||+ .|.||++|..+ ++|.+++.+|.. ..+++. ..|..|+|||+|++ +.|||+
T Consensus 496 ~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~---~~~l~~---------------~~l~~PnGlavd~~~~~LY~a 557 (699)
T 1n7d_A 496 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD---IYSLVT---------------ENIQWPNGITLDLLSGRLYWV 557 (699)
T ss_dssp CCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC---CCEESC---------------SSCSSCCCEEECTTTCCEEEE
T ss_pred CCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC---eeEEEe---------------CCCCCccEEEEeccCCEEEEE
Confidence 3799999998 57899999876 899999988532 222221 13778999999974 789999
Q ss_pred ECCCCEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 014345 98 DTMNMAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 168 (426)
Q Consensus 98 Dt~N~rIrk~d-~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~ 168 (426)
|+.+++|.+++ +|. ..+++.. ...+..|.+|+ ++. +.||++|+++++|.++++..
T Consensus 558 D~~~~~I~~~d~dG~~~~~~~~~--------------~~~~~~P~gla-vd~-~~lywtd~~~~~V~~~d~~~ 614 (699)
T 1n7d_A 558 DSKLHSISSIDVNGGNRKTILED--------------EKRLAHPFSLA-VFE-DKVFWTDIINEAIFSANRLT 614 (699)
T ss_dssp ETTTTEEEEECSSSSCCEEECCC--------------SSSCSSCCCCE-EET-TEEEEECSTTTCEEEEETTT
T ss_pred ecCCCeEEEEccCCCceEEEEec--------------CCcCCCceEeE-EEC-CEEEEEeCCCCeEEEEEccC
Confidence 99999999999 655 4444321 12466899999 454 59999999999999999753
No 41
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.20 E-value=5.5e-10 Score=107.44 Aligned_cols=114 Identities=14% Similarity=0.098 Sum_probs=87.1
Q ss_pred CCCceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEEC
Q 014345 20 GIEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADT 99 (426)
Q Consensus 20 ~~~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt 99 (426)
+..|.|++++++|+|||+|..+++|++++.++. ...++... ..|.||+++++|+|||||.
T Consensus 31 ~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~----~~~~~~~~----------------~~p~gia~~~dG~l~vad~ 90 (306)
T 2p4o_A 31 NTFLENLASAPDGTIFVTNHEVGEIVSITPDGN----QQIHATVE----------------GKVSGLAFTSNGDLVATGW 90 (306)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTCC----EEEEEECS----------------SEEEEEEECTTSCEEEEEE
T ss_pred CCCcceEEECCCCCEEEEeCCCCeEEEECCCCc----eEEEEeCC----------------CCceeEEEcCCCcEEEEec
Confidence 347999999999999999999999999999853 33333221 1499999999999999997
Q ss_pred CCC--EEEEEc--CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCC
Q 014345 100 MNM--AIRKIS--DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFD 169 (426)
Q Consensus 100 ~N~--rIrk~d--~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~ 169 (426)
.++ +|.+++ ++.+..++... ....|.+++ +...+.+||+|..+++|++++....
T Consensus 91 ~~~~~~v~~~d~~~g~~~~~~~~~---------------~~~~~~g~~-~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 91 NADSIPVVSLVKSDGTVETLLTLP---------------DAIFLNGIT-PLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp CTTSCEEEEEECTTSCEEEEEECT---------------TCSCEEEEE-ESSSSEEEEEETTTTEEEEEETTTT
T ss_pred cCCcceEEEEcCCCCeEEEEEeCC---------------CccccCccc-ccCCCcEEEEECCCCeEEEEeCCCC
Confidence 654 588876 55566665421 123467777 5677899999998999999998754
No 42
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.20 E-value=2.2e-10 Score=110.42 Aligned_cols=117 Identities=7% Similarity=-0.005 Sum_probs=87.2
Q ss_pred CCceEEEEcCCCc-EEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEEC
Q 014345 21 IEPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADT 99 (426)
Q Consensus 21 ~~P~GIaVd~dG~-LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt 99 (426)
..|+||+++++|+ |||+|..+++|++++.++...+....++. +..|.||++|++|+||||+.
T Consensus 185 ~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-----------------~~gP~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 185 HVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-----------------IPNPGNIKRNADGHFWVSSS 247 (322)
T ss_dssp SCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-----------------CSSEEEEEECTTSCEEEEEE
T ss_pred ccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-----------------CCCCCCeEECCCCCEEEEec
Confidence 3799999999987 99999999999999988543233333321 11289999999999999997
Q ss_pred C----------CCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 014345 100 M----------NMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 168 (426)
Q Consensus 100 ~----------N~rIrk~d-~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~ 168 (426)
. +++|.+++ ++.+........ | ..+..|.+++. .++.|||++..+++|.++++..
T Consensus 248 ~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~--------g----~~~~~~~~~~~--~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 248 EELDGNMHGRVDPKGIKFDEFGNILEVIPLPP--------P----FAGEHFEQIQE--HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp EETTSSTTSCEEEEEEEECTTSCEEEEEECCT--------T----TTTSCCCEEEE--ETTEEEEECSSCSEEEEEEC--
T ss_pred CcccccccCCCccEEEEECCCCCEEEEEECCC--------C----CccccceEEEE--eCCEEEEeecCCCceEEEeccc
Confidence 6 67899999 666543333211 1 12677888874 4789999999999999999864
No 43
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.18 E-value=4.4e-10 Score=107.48 Aligned_cols=146 Identities=11% Similarity=0.114 Sum_probs=108.2
Q ss_pred CcEEEEEecCCCCCCCceEEEEcCCCc-EEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcce
Q 014345 7 GYTVETVFDGSKLGIEPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKG 85 (426)
Q Consensus 7 G~tv~tv~~g~~l~~~P~GIaVd~dG~-LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~G 85 (426)
+..++.+..+.. .+.|.+.+++|+ ||++|..+++|++++.++ .+..+... -..|++
T Consensus 34 ~~~~~~l~~~~~---~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g----~~~~~~~~----------------~~~~~g 90 (305)
T 3dr2_A 34 DARLLTLYDQAT---WSEGPAWWEAQRTLVWSDLVGRRVLGWREDG----TVDVLLDA----------------TAFTNG 90 (305)
T ss_dssp TCCCEEEECCCS---SEEEEEEEGGGTEEEEEETTTTEEEEEETTS----CEEEEEES----------------CSCEEE
T ss_pred CCceEEEecCCc---CccCCeEeCCCCEEEEEECCCCEEEEEeCCC----CEEEEeCC----------------CCccce
Confidence 456777887766 578999999988 999999999999999864 33444321 234899
Q ss_pred EEEcCCCCEEEEECCCCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEEC--------
Q 014345 86 LTVDDRGNIYIADTMNMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDR-------- 156 (426)
Q Consensus 86 IaVd~dG~LYVADt~N~rIrk~d-~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDs-------- 156 (426)
+++|++|+|||++..+++|.+++ ++.+.+++.... ...++.|++|+ ++++|+|||+|.
T Consensus 91 l~~d~dG~l~v~~~~~~~v~~~~~~g~~~~~~~~~~------------~~~~~~~~~i~-~d~dG~l~~td~~~g~~~~~ 157 (305)
T 3dr2_A 91 NAVDAQQRLVHCEHGRRAITRSDADGQAHLLVGRYA------------GKRLNSPNDLI-VARDGAIWFTDPPFGLRKPS 157 (305)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTSCEEEEECEET------------TEECSCCCCEE-ECTTSCEEEECCSGGGSCGG
T ss_pred eeECCCCCEEEEECCCCEEEEECCCCCEEEEEeccC------------CCccCCCCCEE-ECCCCCEEEeCcCCCccccc
Confidence 99999999999999989999999 666666654211 12467899998 799999999984
Q ss_pred ---------CCCeEEEEEcCCCceEeecCCCCcceEEEEec
Q 014345 157 ---------GNRAIREIQLHFDDCAYQYGSSFPLGIAVLLA 188 (426)
Q Consensus 157 ---------gN~rIr~I~l~~~~~~~~~~~g~P~GIAv~~g 188 (426)
..+.|.++++.+...........|.|+++...
T Consensus 158 ~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~p~gl~~spd 198 (305)
T 3dr2_A 158 QGCPADPELAHHSVYRLPPDGSPLQRMADLDHPNGLAFSPD 198 (305)
T ss_dssp GSCCCCCSSSCEEEEEECSSSCCCEEEEEESSEEEEEECTT
T ss_pred cccccccccCCCeEEEEcCCCCcEEEEecCCCCcceEEcCC
Confidence 23679999985443332215567888887543
No 44
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.17 E-value=2.3e-09 Score=101.01 Aligned_cols=135 Identities=16% Similarity=0.178 Sum_probs=99.3
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEEC--
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADT-- 99 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt-- 99 (426)
.|.+|+++++|+|||++..+++|.+++... +++..+.... . ...++.|++|++|++|+|||+|.
T Consensus 70 ~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~---g~~~~~~~~~-------~----~~~~~~~~~i~~d~~G~l~vtd~~~ 135 (296)
T 3e5z_A 70 HQNGHCLNKQGHLIACSHGLRRLERQREPG---GEWESIADSF-------E----GKKLNSPNDVCLAPDGSLWFSDPTY 135 (296)
T ss_dssp SEEEEEECTTCCEEEEETTTTEEEEECSTT---CCEEEEECEE-------T----TEECCCCCCEEECTTSCEEEEECSH
T ss_pred CcceeeECCCCcEEEEecCCCeEEEEcCCC---CcEEEEeecc-------C----CCCCCCCCCEEECCCCCEEEECCcc
Confidence 699999999999999999889999999843 4444444321 0 12367899999999999999986
Q ss_pred ---------------CCCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEE
Q 014345 100 ---------------MNMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIRE 163 (426)
Q Consensus 100 ---------------~N~rIrk~d-~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~ 163 (426)
..++|.+++ ++.+..+.. .+..|++|+ +++++.++|+|..+++|++
T Consensus 136 g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~-----------------~~~~~~gi~-~s~dg~~lv~~~~~~~i~~ 197 (296)
T 3e5z_A 136 GIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIR-----------------DRVKPNGLA-FLPSGNLLVSDTGDNATHR 197 (296)
T ss_dssp HHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEEC-----------------CCSSEEEEE-ECTTSCEEEEETTTTEEEE
T ss_pred ccccccccccccccCCCcEEEEECCCCCEEEeec-----------------CCCCCccEE-ECCCCCEEEEeCCCCeEEE
Confidence 245899998 555555543 244688998 6888877799999999999
Q ss_pred EEcCC-Cce-----EeecCCCCcceEEEEec
Q 014345 164 IQLHF-DDC-----AYQYGSSFPLGIAVLLA 188 (426)
Q Consensus 164 I~l~~-~~~-----~~~~~~g~P~GIAv~~g 188 (426)
+++.. ... ......+.|.+|+++..
T Consensus 198 ~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~ 228 (296)
T 3e5z_A 198 YCLNARGETEYQGVHFTVEPGKTDGLRVDAG 228 (296)
T ss_dssp EEECSSSCEEEEEEEECCSSSCCCSEEEBTT
T ss_pred EEECCCCcCcCCCeEeeCCCCCCCeEEECCC
Confidence 99862 222 11223467899999844
No 45
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.14 E-value=1.5e-09 Score=103.84 Aligned_cols=133 Identities=17% Similarity=0.219 Sum_probs=97.6
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECC-
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM- 100 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~- 100 (426)
.|.+++++++|+|||++..+++|.+++.++ .+..++... .+ ..++.|++|+++++|+|||+|..
T Consensus 87 ~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g----~~~~~~~~~-------~~----~~~~~~~~i~~d~dG~l~~td~~~ 151 (305)
T 3dr2_A 87 FTNGNAVDAQQRLVHCEHGRRAITRSDADG----QAHLLVGRY-------AG----KRLNSPNDLIVARDGAIWFTDPPF 151 (305)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTS----CEEEEECEE-------TT----EECSCCCCEEECTTSCEEEECCSG
T ss_pred ccceeeECCCCCEEEEECCCCEEEEECCCC----CEEEEEecc-------CC----CccCCCCCEEECCCCCEEEeCcCC
Confidence 699999999999999999889999999873 445554321 11 24788999999999999999841
Q ss_pred ----------------CCEEEEEc--CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECCC---
Q 014345 101 ----------------NMAIRKIS--DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRGN--- 158 (426)
Q Consensus 101 ----------------N~rIrk~d--~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaDsgN--- 158 (426)
...|.+++ .+.+..+. . +..|++|+ +++++ .|||+|+.+
T Consensus 152 g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~-----------------~~~p~gl~-~spdg~~lyv~~~~~~~~ 212 (305)
T 3dr2_A 152 GLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D-----------------LDHPNGLA-FSPDEQTLYVSQTPEQGH 212 (305)
T ss_dssp GGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E-----------------ESSEEEEE-ECTTSSEEEEEECCC---
T ss_pred CccccccccccccccCCCeEEEEcCCCCcEEEEe-c-----------------CCCCcceE-EcCCCCEEEEEecCCcCC
Confidence 35788888 34455543 1 33688998 56666 599999974
Q ss_pred --CeEEEEEcCCCceE-----eecCCCCcceEEEEec
Q 014345 159 --RAIREIQLHFDDCA-----YQYGSSFPLGIAVLLA 188 (426)
Q Consensus 159 --~rIr~I~l~~~~~~-----~~~~~g~P~GIAv~~g 188 (426)
++|+++++...... .....+.|.||+++..
T Consensus 213 ~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~ 249 (305)
T 3dr2_A 213 GSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRG 249 (305)
T ss_dssp CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTT
T ss_pred CCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCC
Confidence 89999998754311 1223567999998844
No 46
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.13 E-value=1.4e-09 Score=108.72 Aligned_cols=152 Identities=22% Similarity=0.255 Sum_probs=105.9
Q ss_pred ecCCcEEEEEecCCCCCCCceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCc
Q 014345 4 FESGYTVETVFDGSKLGIEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHP 83 (426)
Q Consensus 4 ~~~G~tv~tv~~g~~l~~~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P 83 (426)
...++.++.++.+.. .|.+|+++++|.|||+|.. ++|++++.+ |. ..+++..... ..+..|
T Consensus 15 ~~~~~~~~~va~~l~---~P~~ia~~pdG~l~V~e~~-g~I~~~d~~----G~-~~~~~~~v~~----------~g~~g~ 75 (354)
T 3a9g_A 15 EEWKFKISEVASDLE---VPWSIAPLGGGRYLVTERP-GRLVLISPS----GK-KLVASFDVAN----------VGEAGL 75 (354)
T ss_dssp -CCCEEEEEEECSCS---CEEEEEEEETTEEEEEETT-TEEEEECSS----CE-EEEEECCCCC----------STTCSE
T ss_pred CCCCeEEEEEeCCCC---CCeEEEEcCCCeEEEEeCC-CEEEEEeCC----Cc-eEeeccceee----------cCCCce
Confidence 356788998888533 8999999999999999976 899999866 34 4454321000 114569
Q ss_pred ceEEEcCC----CCEEEEECC---C----CEEEEEc-CCC------cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEE
Q 014345 84 KGLTVDDR----GNIYIADTM---N----MAIRKIS-DSG------VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYI 145 (426)
Q Consensus 84 ~GIaVd~d----G~LYVADt~---N----~rIrk~d-~g~------VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~v 145 (426)
.||+++++ |.|||+++. + ++|.+++ ++. ..++..+.. ......|.+|+ +
T Consensus 76 ~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~------------~~~~h~~~~l~-~ 142 (354)
T 3a9g_A 76 LGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIP------------GAYIHNGGRIR-F 142 (354)
T ss_dssp EEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEE------------CCSSCCCCCEE-E
T ss_pred eeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCC------------CCCCcCCceEE-E
Confidence 99999996 899999974 4 7899888 433 222321100 01234578898 6
Q ss_pred CCCCeEEEEECC-------------CCeEEEEEcCCC---------ceEeecCCCCcceEEEEe
Q 014345 146 GSSCSLLVIDRG-------------NRAIREIQLHFD---------DCAYQYGSSFPLGIAVLL 187 (426)
Q Consensus 146 d~~G~LYVaDsg-------------N~rIr~I~l~~~---------~~~~~~~~g~P~GIAv~~ 187 (426)
+++|.|||++.. +++|.+|++++. ...+..+.-.|.||+++.
T Consensus 143 ~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~ 206 (354)
T 3a9g_A 143 GPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHR 206 (354)
T ss_dssp CTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECT
T ss_pred CCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeC
Confidence 899999999632 368999998764 123455666799999986
No 47
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.09 E-value=1.6e-09 Score=107.78 Aligned_cols=152 Identities=18% Similarity=0.223 Sum_probs=103.8
Q ss_pred CCcEEEEEecCCCCCCCceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcce
Q 014345 6 SGYTVETVFDGSKLGIEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKG 85 (426)
Q Consensus 6 ~G~tv~tv~~g~~l~~~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~G 85 (426)
..+.++.++.+.. .|.+|+++++|.|||+|.. ++|++++ + +....+++..... ..+..|.|
T Consensus 19 ~~~~~~~va~~l~---~P~~ia~~pdG~l~V~e~~-g~I~~i~-~----g~~~~~~~~~v~~----------~g~~~p~g 79 (352)
T 2ism_A 19 QGLRVEEVVGGLE---VPWALAFLPDGGMLIAERP-GRIRLFR-E----GRLSTYAELSVYH----------RGESGLLG 79 (352)
T ss_dssp -CCCEEEEECCCS---CEEEEEECTTSCEEEEETT-TEEEEEE-T----TEEEEEEECCCCC----------STTCSEEE
T ss_pred CCcEEEEEECCCC---CceEEEEcCCCeEEEEeCC-CeEEEEE-C----CCccEeecceEee----------cCCCCcee
Confidence 3567788887533 8999999999999999975 8999998 5 3445554432000 12567999
Q ss_pred EEEcCC----CCEEEEECCC-----CEEEEEc-CCC-c---EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeE
Q 014345 86 LTVDDR----GNIYIADTMN-----MAIRKIS-DSG-V---TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSL 151 (426)
Q Consensus 86 IaVd~d----G~LYVADt~N-----~rIrk~d-~g~-V---stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~L 151 (426)
|+++++ +.|||+++.+ ++|.+++ ++. + .++..+... .......|.+|+ ++++|.|
T Consensus 80 ia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~----------~~~~~h~~~~l~-~~pdG~L 148 (352)
T 2ism_A 80 LALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPA----------RPHGLHSGGRIA-FGPDGML 148 (352)
T ss_dssp EEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECC----------CTTCCCCCCCEE-ECTTSCE
T ss_pred EEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCC----------CCCCCcCCceEE-ECCCCCE
Confidence 999997 8899999865 7899998 432 2 223221000 011244678998 6899999
Q ss_pred EEEECC-------------CCeEEEEEcCCC--------------ceEeecCCCCcceEEEEe
Q 014345 152 LVIDRG-------------NRAIREIQLHFD--------------DCAYQYGSSFPLGIAVLL 187 (426)
Q Consensus 152 YVaDsg-------------N~rIr~I~l~~~--------------~~~~~~~~g~P~GIAv~~ 187 (426)
||++.. .++|.+|++++. ...+..+.-.|.|||++.
T Consensus 149 yv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~ 211 (352)
T 2ism_A 149 YVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHP 211 (352)
T ss_dssp EEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECT
T ss_pred EEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEEC
Confidence 999732 368999998761 123344555688999886
No 48
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.09 E-value=5.5e-09 Score=100.45 Aligned_cols=140 Identities=11% Similarity=-0.012 Sum_probs=96.5
Q ss_pred CceEEEEcCCCcEEEEECCCC--eEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEEC
Q 014345 22 EPYSVEVLPGGELLILDSANS--NLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~--rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt 99 (426)
.|+||+++++|+|||+|..++ +|++++... +++..++... ....|.|+++..++.+||+|.
T Consensus 73 ~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~---g~~~~~~~~~--------------~~~~~~g~~~~~~~~~~v~d~ 135 (306)
T 2p4o_A 73 KVSGLAFTSNGDLVATGWNADSIPVVSLVKSD---GTVETLLTLP--------------DAIFLNGITPLSDTQYLTADS 135 (306)
T ss_dssp EEEEEEECTTSCEEEEEECTTSCEEEEEECTT---SCEEEEEECT--------------TCSCEEEEEESSSSEEEEEET
T ss_pred CceeEEEcCCCcEEEEeccCCcceEEEEcCCC---CeEEEEEeCC--------------CccccCcccccCCCcEEEEEC
Confidence 799999999999999997654 599988653 4555555431 133478999988888999999
Q ss_pred CCCEEEEEc-CCC---cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCc----e
Q 014345 100 MNMAIRKIS-DSG---VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDD----C 171 (426)
Q Consensus 100 ~N~rIrk~d-~g~---VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~----~ 171 (426)
.+++|++++ .++ +....+. .. .. .....|..|++|. .+.+.|||+|+.+++|++++++... .
T Consensus 136 ~~g~i~~~d~~~~~~~v~~~~~~--~~-~~-----~~~~~~~~pngis--~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~ 205 (306)
T 2p4o_A 136 YRGAIWLIDVVQPSGSIWLEHPM--LA-RS-----NSESVFPAANGLK--RFGNFLYVSNTEKMLLLRIPVDSTDKPGEP 205 (306)
T ss_dssp TTTEEEEEETTTTEEEEEEECGG--GS-CS-----STTCCSCSEEEEE--EETTEEEEEETTTTEEEEEEBCTTSCBCCC
T ss_pred CCCeEEEEeCCCCcEeEEEECCc--cc-cc-----cccCCCCcCCCcC--cCCCEEEEEeCCCCEEEEEEeCCCCCCCcc
Confidence 899999999 332 2222221 00 00 0123467899983 3456899999999999999987521 1
Q ss_pred EeecCCCCcceEEEEec
Q 014345 172 AYQYGSSFPLGIAVLLA 188 (426)
Q Consensus 172 ~~~~~~g~P~GIAv~~g 188 (426)
........|.|||++..
T Consensus 206 ~~~~~~~~P~gi~vd~d 222 (306)
T 2p4o_A 206 EIFVEQTNIDDFAFDVE 222 (306)
T ss_dssp EEEEESCCCSSEEEBTT
T ss_pred EEEeccCCCCCeEECCC
Confidence 11222357999999854
No 49
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.00 E-value=7.6e-09 Score=97.03 Aligned_cols=137 Identities=15% Similarity=0.192 Sum_probs=96.1
Q ss_pred CceEEEEcCCCcEEEE-------ECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCC-CC
Q 014345 22 EPYSVEVLPGGELLIL-------DSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR-GN 93 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVa-------D~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~d-G~ 93 (426)
.|.+++++++|+|||+ +..+++|++++... +++..+... .. .+ ....|.+|+++++ |+
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~---g~~~~~~~~--~~----~~-----~~~~~~~i~~~~~~g~ 84 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKT---GKKTVICKP--EV----NG-----YGGIPAGCQCDRDANQ 84 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTT---CCEEEEECC--EE----TT-----EECCEEEEEECSSSSE
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCC---CcEEEEEec--cc----CC-----CCCCCceEEEecCCCc
Confidence 7999999999999999 88889999999653 344443320 00 01 1346999999999 99
Q ss_pred EEEEECCCCEEEEEc-CCCcEEE-eCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCC-------------
Q 014345 94 IYIADTMNMAIRKIS-DSGVTTI-AGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGN------------- 158 (426)
Q Consensus 94 LYVADt~N~rIrk~d-~g~VstI-aGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN------------- 158 (426)
|||++..+ .|.+++ ++.+..+ ..... ...+..|++|+ ++++|+|||++..+
T Consensus 85 l~v~~~~~-~l~~~d~~g~~~~~~~~~~~------------~~~~~~~~~i~-~d~~g~l~v~~~~~~~~~~~~~~~~~~ 150 (314)
T 1pjx_A 85 LFVADMRL-GLLVVQTDGTFEEIAKKDSE------------GRRMQGCNDCA-FDYEGNLWITAPAGEVAPADYTRSMQE 150 (314)
T ss_dssp EEEEETTT-EEEEEETTSCEEECCSBCTT------------SCBCBCCCEEE-ECTTSCEEEEECBCBCTTSCCCBTTSS
T ss_pred EEEEECCC-CEEEEeCCCCEEEEEeccCC------------CccccCCcCEE-ECCCCCEEEEecCcccccccccccccC
Confidence 99999854 899998 6445444 32110 11345789998 68999999999865
Q ss_pred --CeEEEEEcCCCceEeecCCCCcceEEEE
Q 014345 159 --RAIREIQLHFDDCAYQYGSSFPLGIAVL 186 (426)
Q Consensus 159 --~rIr~I~l~~~~~~~~~~~g~P~GIAv~ 186 (426)
+.|.+++..+...........|.++++.
T Consensus 151 ~~~~l~~~~~~g~~~~~~~~~~~~~~i~~~ 180 (314)
T 1pjx_A 151 KFGSIYCFTTDGQMIQVDTAFQFPNGIAVR 180 (314)
T ss_dssp SCEEEEEECTTSCEEEEEEEESSEEEEEEE
T ss_pred CCCeEEEECCCCCEEEeccCCCCcceEEEe
Confidence 6899998774322233344567788776
No 50
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.00 E-value=5e-09 Score=99.93 Aligned_cols=131 Identities=11% Similarity=0.058 Sum_probs=92.2
Q ss_pred CCceEEEEcCCCcEEEEEC-----------CCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEc
Q 014345 21 IEPYSVEVLPGGELLILDS-----------ANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVD 89 (426)
Q Consensus 21 ~~P~GIaVd~dG~LYVaD~-----------~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd 89 (426)
..|+++++|++|+|||++. ..++|++++.++ .+..+... +..|+||+++
T Consensus 98 ~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g----~~~~~~~~----------------~~~pngi~~s 157 (297)
T 3g4e_A 98 NRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH----HVKKYFDQ----------------VDISNGLDWS 157 (297)
T ss_dssp EEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS----CEEEEEEE----------------ESBEEEEEEC
T ss_pred CCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC----CEEEEeec----------------cccccceEEc
Confidence 4689999999999999984 345899998873 33333321 5569999999
Q ss_pred CCCC-EEEEECCCCEEEEEc-C---CCcE---EEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeE
Q 014345 90 DRGN-IYIADTMNMAIRKIS-D---SGVT---TIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAI 161 (426)
Q Consensus 90 ~dG~-LYVADt~N~rIrk~d-~---g~Vs---tIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rI 161 (426)
++|+ |||+|+.+++|++++ + |.+. .++... .....|.+|+ +|++|+|||++.++++|
T Consensus 158 pdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~--------------~~~~~p~g~~-~d~~G~lwva~~~~~~v 222 (297)
T 3g4e_A 158 LDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLE--------------KEEQIPDGMC-IDAEGKLWVACYNGGRV 222 (297)
T ss_dssp TTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECC--------------GGGCEEEEEE-EBTTSCEEEEEETTTEE
T ss_pred CCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECC--------------CCCCCCCeeE-ECCCCCEEEEEcCCCEE
Confidence 9986 999999999999997 3 2221 121100 0113588998 79999999999999999
Q ss_pred EEEEcCCCceE-e-ecCCCCcceEEEE
Q 014345 162 REIQLHFDDCA-Y-QYGSSFPLGIAVL 186 (426)
Q Consensus 162 r~I~l~~~~~~-~-~~~~g~P~GIAv~ 186 (426)
.+++++..... . ......|..+|+.
T Consensus 223 ~~~d~~tG~~~~~i~~p~~~~t~~~f~ 249 (297)
T 3g4e_A 223 IRLDPVTGKRLQTVKLPVDKTTSCCFG 249 (297)
T ss_dssp EEECTTTCCEEEEEECSSSBEEEEEEE
T ss_pred EEEcCCCceEEEEEECCCCCceEEEEe
Confidence 99999743332 2 2222356666654
No 51
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.96 E-value=1.3e-08 Score=97.00 Aligned_cols=134 Identities=11% Similarity=0.086 Sum_probs=95.0
Q ss_pred CCceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECC
Q 014345 21 IEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 100 (426)
Q Consensus 21 ~~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~ 100 (426)
..|.+|+++++|+|||+. .+.|.+++.++ +.+..++.... + ..++.|++|++|++|+|||++..
T Consensus 54 ~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~---g~~~~~~~~~~-------~----~~~~~~~di~~d~dG~l~~~~~~ 117 (297)
T 3g4e_A 54 APVSSVALRQSGGYVATI--GTKFCALNWKE---QSAVVLATVDN-------D----KKNNRFNDGKVDPAGRYFAGTMA 117 (297)
T ss_dssp SCEEEEEEBTTSSEEEEE--TTEEEEEETTT---TEEEEEEECCT-------T----CSSEEEEEEEECTTSCEEEEEEE
T ss_pred CceEEEEECCCCCEEEEE--CCeEEEEECCC---CcEEEEEecCC-------C----CCCCCCCCEEECCCCCEEEecCC
Confidence 479999999999999997 57999999874 44555543210 1 12567899999999999999843
Q ss_pred -----------CCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECCCCeEEEEEcC
Q 014345 101 -----------NMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRGNRAIREIQLH 167 (426)
Q Consensus 101 -----------N~rIrk~d-~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaDsgN~rIr~I~l~ 167 (426)
..+|.+++ ++.+..+.. .+..|++|+ +++++ .|||+|+.+++|++++.+
T Consensus 118 ~~~~~~~~~~~~~~l~~~d~~g~~~~~~~-----------------~~~~pngi~-~spdg~~lyv~~~~~~~i~~~~~d 179 (297)
T 3g4e_A 118 EETAPAVLERHQGALYSLFPDHHVKKYFD-----------------QVDISNGLD-WSLDHKIFYYIDSLSYSVDAFDYD 179 (297)
T ss_dssp CCSBTTBCCTTCEEEEEECTTSCEEEEEE-----------------EESBEEEEE-ECTTSCEEEEEEGGGTEEEEEEEC
T ss_pred cccccccccCCCcEEEEEECCCCEEEEee-----------------ccccccceE-EcCCCCEEEEecCCCCcEEEEecc
Confidence 35788888 555554432 244689999 56666 699999999999999874
Q ss_pred --CCceE----e---ecCCCCcceEEEEec
Q 014345 168 --FDDCA----Y---QYGSSFPLGIAVLLA 188 (426)
Q Consensus 168 --~~~~~----~---~~~~g~P~GIAv~~g 188 (426)
..... . ....+.|.|++++..
T Consensus 180 ~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~ 209 (297)
T 3g4e_A 180 LQTGQISNRRSVYKLEKEEQIPDGMCIDAE 209 (297)
T ss_dssp TTTCCEEEEEEEEECCGGGCEEEEEEEBTT
T ss_pred CCCCcccCcEEEEECCCCCCCCCeeEECCC
Confidence 22111 1 112357999999843
No 52
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.94 E-value=1.7e-08 Score=100.56 Aligned_cols=159 Identities=13% Similarity=0.128 Sum_probs=102.7
Q ss_pred eeecCCcEEEEEecCCCCCCCceEEEEcCCCc-EEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCccccccc
Q 014345 2 MKFESGYTVETVFDGSKLGIEPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARM 80 (426)
Q Consensus 2 vk~~~G~tv~tv~~g~~l~~~P~GIaVd~dG~-LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~L 80 (426)
+++.+|+.++.++.+.. .|.+|+++++|+ |||++. .++|++++.++.. ...+++...-. ....
T Consensus 2 ~~~p~g~~~~~va~~l~---~P~~i~~~pdG~~l~V~e~-~G~i~~~~~~g~~---~~~~~~~~~v~---------~~g~ 65 (353)
T 2g8s_A 2 AMAPATVNVEVLQDKLD---HPWALAFLPDNHGMLITLR-GGELRHWQAGKGL---SAPLSGVPDVW---------AHGQ 65 (353)
T ss_dssp ----CCSEEEEEEEEES---SEEEEEECSTTCCEEEEET-TTEEEEEETTTEE---CCCCBSCCCCC---------CSTT
T ss_pred CCCCCCcEEEEEECCCC---CcEEEEEcCCCCEEEEEeC-CceEEEEeCCCce---eeEecCCcccc---------cCCC
Confidence 45778999999998433 899999999999 999996 5899999877421 11233221000 0013
Q ss_pred CCcceEEEcC----CCCEEEEECC-------CCEEEEEc-CCC------cEEEeCCccCCCCCCCCCCcccccCCCCCee
Q 014345 81 NHPKGLTVDD----RGNIYIADTM-------NMAIRKIS-DSG------VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDV 142 (426)
Q Consensus 81 n~P~GIaVd~----dG~LYVADt~-------N~rIrk~d-~g~------VstIaGg~~g~~~G~~dG~~~~a~f~~P~gI 142 (426)
..|.||++++ +|.|||+++. .++|.+++ ++. ..++..... ........+.+|
T Consensus 66 ~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p----------~~~~~~h~~~~l 135 (353)
T 2g8s_A 66 GGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMP----------KLSTGNHFGGRL 135 (353)
T ss_dssp CSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSS----------CCBSSSCCCCCE
T ss_pred CCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECC----------CCCCCcccCccE
Confidence 3579999998 5899999875 45788876 321 222321100 001123457888
Q ss_pred EEECCCCeEEEEECC-------------CCeEEEEEcCCC--------------ceEeecCCCCcceEEEEe
Q 014345 143 VYIGSSCSLLVIDRG-------------NRAIREIQLHFD--------------DCAYQYGSSFPLGIAVLL 187 (426)
Q Consensus 143 a~vd~~G~LYVaDsg-------------N~rIr~I~l~~~--------------~~~~~~~~g~P~GIAv~~ 187 (426)
+ ++++|.|||+.-. .++|.+|++++. ...+..+.-.|.|++++.
T Consensus 136 ~-~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~ 206 (353)
T 2g8s_A 136 V-FDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNP 206 (353)
T ss_dssp E-ECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEET
T ss_pred E-ECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEEC
Confidence 8 6899999999632 368999998764 123344555688899885
No 53
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.92 E-value=4.5e-08 Score=95.56 Aligned_cols=156 Identities=14% Similarity=0.066 Sum_probs=98.4
Q ss_pred CCCceEEEEcCCCcEEEEECC-----CCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC-CCC
Q 014345 20 GIEPYSVEVLPGGELLILDSA-----NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGN 93 (426)
Q Consensus 20 ~~~P~GIaVd~dG~LYVaD~~-----n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~-dG~ 93 (426)
+..|+||++|++|+|||+|.+ .++|++++.++ +++...+..+... + .....|++|++|+ +|.
T Consensus 66 ~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~t---g~~~~~~~~~~~~-----~----~~~~~~~~v~vd~~~g~ 133 (343)
T 2qe8_A 66 FDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLN---NQLSRVIYLPPPI-----T----LSNSFVNDLAVDLIHNF 133 (343)
T ss_dssp CSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTT---TEEEEEEECCTTT-----S----CTTCCCCEEEEETTTTE
T ss_pred eeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCC---CeEEEEEECChhh-----c----ccccccceEEEecCCCE
Confidence 358999999999999999987 58999999874 3422222211000 0 1235689999996 578
Q ss_pred EEEEEC---CCCEEEEEc--CCCcEEEeCCccCCCC-C---CCCCCc-----cccc----CCCCCeeEEECCCC-eEEEE
Q 014345 94 IYIADT---MNMAIRKIS--DSGVTTIAGGKWGRGG-G---HVDGPS-----EDAK----FSNDFDVVYIGSSC-SLLVI 154 (426)
Q Consensus 94 LYVADt---~N~rIrk~d--~g~VstIaGg~~g~~~-G---~~dG~~-----~~a~----f~~P~gIa~vd~~G-~LYVa 154 (426)
+||+|. .++.|.+++ .+.+..+..+...... . ..+|.. .+.. ...|++|+ ++++| .||++
T Consensus 134 ~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia-~s~dg~~ly~~ 212 (343)
T 2qe8_A 134 VYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIV-LDAENEWLYLS 212 (343)
T ss_dssp EEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEE-ECTTSCEEEEE
T ss_pred EEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeE-eccCCCEEEEE
Confidence 999999 889999999 3555444432100000 0 001100 0000 13588999 56677 79999
Q ss_pred ECCCCeEEEEEcCC---Cc---------eEeecCCCCcceEEEEec
Q 014345 155 DRGNRAIREIQLHF---DD---------CAYQYGSSFPLGIAVLLA 188 (426)
Q Consensus 155 DsgN~rIr~I~l~~---~~---------~~~~~~~g~P~GIAv~~g 188 (426)
+...++|.+++... .. .......+.|.|||++..
T Consensus 213 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~ 258 (343)
T 2qe8_A 213 PMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKD 258 (343)
T ss_dssp ESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTT
T ss_pred eCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCC
Confidence 99999999998531 00 111223457999999854
No 54
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.89 E-value=4.9e-08 Score=95.25 Aligned_cols=126 Identities=11% Similarity=0.048 Sum_probs=87.3
Q ss_pred CCceEEEEcCCCcEEEEECC--C--CeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEE
Q 014345 21 IEPYSVEVLPGGELLILDSA--N--SNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYI 96 (426)
Q Consensus 21 ~~P~GIaVd~dG~LYVaD~~--n--~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYV 96 (426)
..|.+|+++++|.+||+... . .+|.+++ + +.+..+.... . . ....|..|.||++|++|+|||
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~-~----g~~~~~p~~~--~----~---~~~~~~~p~gv~~d~~g~L~v 82 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT-Q----DGLIPFPPQS--G----N---AIITFDTVLGIKSDGNGIVWM 82 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE-T----TEEEESCCCC--S----S---CCCCCSCEEEEEECSSSEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEEC-C----CCeecCCCcc--c----C---cccceeEeeEEEEcCCCcEEE
Confidence 47999999999999999742 2 3899998 5 3333222110 0 0 113488999999999999999
Q ss_pred EECC-----CCEEEEEc-C-CCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEEC---CCCeEEEEE
Q 014345 97 ADTM-----NMAIRKIS-D-SGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDR---GNRAIREIQ 165 (426)
Q Consensus 97 ADt~-----N~rIrk~d-~-g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDs---gN~rIr~I~ 165 (426)
+|.+ ..+|.++| + +.+ .++...... ......|++|++....+.+||+|. .++.|.+++
T Consensus 83 ~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~-----------~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d 151 (343)
T 2qe8_A 83 LDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPI-----------TLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVD 151 (343)
T ss_dssp EECHHHHTSCCEEEEEETTTTEEEEEEECCTTT-----------SCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEE
T ss_pred EcCCCCcCCCCeEEEEECCCCeEEEEEECChhh-----------cccccccceEEEecCCCEEEEEcCccCCCCeEEEEE
Confidence 9987 58999999 3 553 444321100 012356899994334689999999 889999999
Q ss_pred cCCCce
Q 014345 166 LHFDDC 171 (426)
Q Consensus 166 l~~~~~ 171 (426)
+.....
T Consensus 152 ~~~g~~ 157 (343)
T 2qe8_A 152 LQTGLA 157 (343)
T ss_dssp TTTCCE
T ss_pred CCCCCE
Confidence 875443
No 55
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.87 E-value=3.8e-08 Score=97.77 Aligned_cols=132 Identities=10% Similarity=0.061 Sum_probs=81.7
Q ss_pred CCceEEEEcCC----CcEEEEECCC-----CeEEEEeCCCCcccccEEEec-CCCCcccccCCcccccccCCcceEEEcC
Q 014345 21 IEPYSVEVLPG----GELLILDSAN-----SNLYRISSSLSLYSRPKLVAG-SAEGYSGHVDGKPREARMNHPKGLTVDD 90 (426)
Q Consensus 21 ~~P~GIaVd~d----G~LYVaD~~n-----~rI~kid~dg~~~g~v~~vaG-~~~G~~G~~dG~a~~A~Ln~P~GIaVd~ 90 (426)
..|.||+++++ |.|||++..+ ++|.+++.++........++. .+. . ......|.+|++++
T Consensus 75 ~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~-~---------~~~~h~~~~l~~~p 144 (352)
T 2ism_A 75 SGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPA-R---------PHGLHSGGRIAFGP 144 (352)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECC-C---------TTCCCCCCCEEECT
T ss_pred CCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCC-C---------CCCCcCCceEEECC
Confidence 37999999997 7899999865 799999887432122233322 110 0 01256789999999
Q ss_pred CCCEEEEECC-------------CCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECC-CCeEEEEE
Q 014345 91 RGNIYIADTM-------------NMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGS-SCSLLVID 155 (426)
Q Consensus 91 dG~LYVADt~-------------N~rIrk~d-~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~-~G~LYVaD 155 (426)
+|.|||++.. .++|.+++ ++.+ ..+....+........-...+..|++|+ +++ +|.|||+|
T Consensus 145 dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~---p~~npf~~~~~~~~~i~a~G~rnp~g~a-~d~~~g~l~v~d 220 (352)
T 2ism_A 145 DGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEP---APGNPFLGRRGARPEVYSLGHRNPQGLA-WHPKTGELFSSE 220 (352)
T ss_dssp TSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSB---CTTCTTTTCTTSCTTEEEECCSEECCCE-ECTTTCCEEEEE
T ss_pred CCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCC---CCCCcccCCCCCCccEEEEcCCCcccEE-EECCCCCEEEEE
Confidence 9999999742 36888888 5432 1110000000000011122367899999 566 89999999
Q ss_pred CCCCe--------EEEEEc
Q 014345 156 RGNRA--------IREIQL 166 (426)
Q Consensus 156 sgN~r--------Ir~I~l 166 (426)
.+.++ |..|..
T Consensus 221 ~g~~~~~~~~~dei~~i~~ 239 (352)
T 2ism_A 221 HGPSGEQGYGHDEVNLIVP 239 (352)
T ss_dssp ECC------CCCEEEEECT
T ss_pred cCCCCCCCCCCeEEEEecc
Confidence 98877 666654
No 56
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.85 E-value=1.4e-07 Score=89.71 Aligned_cols=145 Identities=14% Similarity=0.122 Sum_probs=99.3
Q ss_pred CcEEEEEecCCCCCCCceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceE
Q 014345 7 GYTVETVFDGSKLGIEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGL 86 (426)
Q Consensus 7 G~tv~tv~~g~~l~~~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GI 86 (426)
+..+..+..+.. .|.+++++++|+||+++..++.|++++.++ +.+..+.... -..|.+|
T Consensus 34 ~~~~~~~~~~~~---~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~---~~~~~~~~~~---------------~~~~~~i 92 (333)
T 2dg1_A 34 AEPWLEISKKGL---QLEGLNFDRQGQLFLLDVFEGNIFKINPET---KEIKRPFVSH---------------KANPAAI 92 (333)
T ss_dssp CEEEEEEESSCC---CEEEEEECTTSCEEEEETTTCEEEEECTTT---CCEEEEEECS---------------SSSEEEE
T ss_pred cceeEEEeccCc---cccCcEECCCCCEEEEECCCCEEEEEeCCC---CcEEEEeeCC---------------CCCcceE
Confidence 334444444333 689999999999999999999999999875 3333332110 1358999
Q ss_pred EEcCCCCEEEEECCC----CEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECC---
Q 014345 87 TVDDRGNIYIADTMN----MAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRG--- 157 (426)
Q Consensus 87 aVd~dG~LYVADt~N----~rIrk~d-~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsg--- 157 (426)
+++++|+|||++..+ +.|.+++ +++ +..+..... ....|.+|+ ++++|+|||++..
T Consensus 93 ~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--------------~~~~~~~i~-~d~~g~l~v~~~~~~~ 157 (333)
T 2dg1_A 93 KIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLS--------------TAYCIDDMV-FDSKGGFYFTDFRGYS 157 (333)
T ss_dssp EECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSS--------------SCCCEEEEE-ECTTSCEEEEECCCBT
T ss_pred EECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCc--------------cCCcccceE-ECCCCCEEEEeccccc
Confidence 999999999999876 7999999 444 443322100 123688888 6889999999975
Q ss_pred ---CCeEEEEEcCCCceEe-ecCCCCcceEEEEe
Q 014345 158 ---NRAIREIQLHFDDCAY-QYGSSFPLGIAVLL 187 (426)
Q Consensus 158 ---N~rIr~I~l~~~~~~~-~~~~g~P~GIAv~~ 187 (426)
++.|.+++..+..... ......|.++++..
T Consensus 158 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~ 191 (333)
T 2dg1_A 158 TNPLGGVYYVSPDFRTVTPIIQNISVANGIALST 191 (333)
T ss_dssp TBCCEEEEEECTTSCCEEEEEEEESSEEEEEECT
T ss_pred cCCCceEEEEeCCCCEEEEeecCCCcccceEECC
Confidence 4789999877544332 22334567776653
No 57
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.84 E-value=3.8e-08 Score=92.25 Aligned_cols=132 Identities=14% Similarity=0.112 Sum_probs=93.2
Q ss_pred CCceEEEEcCCCcEEEEECCC---------------CeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcce
Q 014345 21 IEPYSVEVLPGGELLILDSAN---------------SNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKG 85 (426)
Q Consensus 21 ~~P~GIaVd~dG~LYVaD~~n---------------~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~G 85 (426)
..|++|+++++|+|||++... +.|++++.++ .+..+.. .+..|++
T Consensus 117 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g----~~~~~~~----------------~~~~~~~ 176 (314)
T 1pjx_A 117 QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG----QMIQVDT----------------AFQFPNG 176 (314)
T ss_dssp BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS----CEEEEEE----------------EESSEEE
T ss_pred cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCC----CEEEecc----------------CCCCcce
Confidence 369999999999999999765 6899998863 3333321 1446899
Q ss_pred EEEc----CCC-CEEEEECCCCEEEEEc-C--CCcE---EEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEE
Q 014345 86 LTVD----DRG-NIYIADTMNMAIRKIS-D--SGVT---TIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVI 154 (426)
Q Consensus 86 IaVd----~dG-~LYVADt~N~rIrk~d-~--g~Vs---tIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVa 154 (426)
++++ ++| .|||+|..+++|.+++ + +.+. .+..-. ...+..|.+|+ ++++|+|||+
T Consensus 177 i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~-------------~~~~~~p~~i~-~d~~G~l~v~ 242 (314)
T 1pjx_A 177 IAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIP-------------GTHEGGADGMD-FDEDNNLLVA 242 (314)
T ss_dssp EEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECC-------------CCSSCEEEEEE-EBTTCCEEEE
T ss_pred EEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECC-------------CCCCCCCCceE-ECCCCCEEEE
Confidence 9999 998 5999999999999998 3 3322 121100 00124688888 7899999999
Q ss_pred ECCCCeEEEEEcC-CCceE-eecCCCCcceEEEE
Q 014345 155 DRGNRAIREIQLH-FDDCA-YQYGSSFPLGIAVL 186 (426)
Q Consensus 155 DsgN~rIr~I~l~-~~~~~-~~~~~g~P~GIAv~ 186 (426)
+..+++|.++++. +.... .......|.+++++
T Consensus 243 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~ 276 (314)
T 1pjx_A 243 NWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFK 276 (314)
T ss_dssp EETTTEEEEECTTCBSCSEEEECSSSCEEEEEEC
T ss_pred EcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEEC
Confidence 9989999999987 33222 22233557777774
No 58
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=98.83 E-value=1.1e-07 Score=95.59 Aligned_cols=163 Identities=18% Similarity=0.181 Sum_probs=107.7
Q ss_pred CCcEEEEEecCCCCCCCceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcce
Q 014345 6 SGYTVETVFDGSKLGIEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKG 85 (426)
Q Consensus 6 ~G~tv~tv~~g~~l~~~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~G 85 (426)
+...++++.++.. .|.+|++.+||.|||++...++|++++.++ +....+.+.+.-.. .....|.|
T Consensus 20 ~~~~~~~va~gL~---~P~~ia~~pdG~llVter~~G~I~~v~~~~---g~~~~v~~~~~v~~---------~g~~GllG 84 (347)
T 3das_A 20 SVKVLRTVATGLN---SPWGLAPLPGGDLLVSSRDEATITRVDAKT---GRKTELGEVPGVSP---------SGEGGLLG 84 (347)
T ss_dssp CEEEEEEEECCCS---SEEEEEECTTSCEEEEETTTCEEEEECTTT---CCEEEEEECTTCCC---------BTTBSEEE
T ss_pred CCceeEEeecCCC---CceEEEEcCCCcEEEEEecCCEEEEEECCC---CcEeeecccCceee---------cCCCCcee
Confidence 3456777887655 899999999999999998789999998763 33444443321000 11445899
Q ss_pred EEEcC----CCCEEEEEC--CCCEEEEEc-CC------C---cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC
Q 014345 86 LTVDD----RGNIYIADT--MNMAIRKIS-DS------G---VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC 149 (426)
Q Consensus 86 IaVd~----dG~LYVADt--~N~rIrk~d-~g------~---VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G 149 (426)
||+++ +|.|||+.+ ..++|.++. ++ . ..+|.-.... ...-....|+ ++++|
T Consensus 85 ia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~------------~~~H~g~~l~-fgpDG 151 (347)
T 3das_A 85 IALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPK------------GVIHNGGRIA-FGPDK 151 (347)
T ss_dssp EEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECC------------CSSCCCCCEE-ECTTS
T ss_pred eEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCC------------CCCccCcccc-CCCCC
Confidence 99998 488999864 456888886 33 1 2333221000 0122456788 68999
Q ss_pred eEEEEE-------------CCCCeEEEEEcCCC--------c-eEeecCCCCcceEEEEecCCceEEEEEEEe
Q 014345 150 SLLVID-------------RGNRAIREIQLHFD--------D-CAYQYGSSFPLGIAVLLAAGFFGYMLALLQ 200 (426)
Q Consensus 150 ~LYVaD-------------sgN~rIr~I~l~~~--------~-~~~~~~~g~P~GIAv~~g~g~~Gy~~a~lq 200 (426)
.|||+- ...+.|.+|++++. . ..+..+.-.|.|+|++.. |.+|+.-.
T Consensus 152 ~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~----G~L~~~d~ 220 (347)
T 3das_A 152 MLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDK----QRLFASEF 220 (347)
T ss_dssp CEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTT----CCEEEEEC
T ss_pred CEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCC----CCEEEEec
Confidence 999994 23589999998864 1 244556667999999852 45665443
No 59
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.82 E-value=1.7e-07 Score=90.95 Aligned_cols=134 Identities=11% Similarity=0.113 Sum_probs=96.4
Q ss_pred CCceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECC
Q 014345 21 IEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 100 (426)
Q Consensus 21 ~~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~ 100 (426)
..|++|+++++|.|||++...+.|.++|..+ +++...+..+ . ...++..|.+|++ .++.|||++.+
T Consensus 84 ~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t---~~~~~~i~~g--~--------~~~~~~~p~~i~~-~~~~lyv~~~~ 149 (328)
T 3dsm_A 84 TSPRYIHFLSDEKAYVTQIWDYRIFIINPKT---YEITGYIECP--D--------MDMESGSTEQMVQ-YGKYVYVNCWS 149 (328)
T ss_dssp SSEEEEEEEETTEEEEEEBSCSEEEEEETTT---TEEEEEEECT--T--------CCTTTCBCCCEEE-ETTEEEEEECT
T ss_pred CCCcEEEEeCCCeEEEEECCCCeEEEEECCC---CeEEEEEEcC--C--------ccccCCCcceEEE-ECCEEEEEcCC
Confidence 4799999988899999997789999999875 2332222111 0 0123567999999 47899999984
Q ss_pred -CCEEEEEc--CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCC----------CeEEEEEc
Q 014345 101 -NMAIRKIS--DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGN----------RAIREIQL 166 (426)
Q Consensus 101 -N~rIrk~d--~g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN----------~rIr~I~l 166 (426)
++.|.++| ++.+ .++..+ ..|.+|+ ++++|.|||++.++ ++|.+|++
T Consensus 150 ~~~~v~viD~~t~~~~~~i~~g------------------~~p~~i~-~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~ 210 (328)
T 3dsm_A 150 YQNRILKIDTETDKVVDELTIG------------------IQPTSLV-MDKYNKMWTITDGGYEGSPYGYEAPSLYRIDA 210 (328)
T ss_dssp TCCEEEEEETTTTEEEEEEECS------------------SCBCCCE-ECTTSEEEEEBCCBCTTCSSCBCCCEEEEEET
T ss_pred CCCEEEEEECCCCeEEEEEEcC------------------CCccceE-EcCCCCEEEEECCCccCCccccCCceEEEEEC
Confidence 88999999 3443 333221 2578888 68899999999886 89999999
Q ss_pred CCCceEee--cC-CCCcceEEEEe
Q 014345 167 HFDDCAYQ--YG-SSFPLGIAVLL 187 (426)
Q Consensus 167 ~~~~~~~~--~~-~g~P~GIAv~~ 187 (426)
........ .. ...|.++|+..
T Consensus 211 ~t~~v~~~~~~~~g~~p~~la~~~ 234 (328)
T 3dsm_A 211 ETFTVEKQFKFKLGDWPSEVQLNG 234 (328)
T ss_dssp TTTEEEEEEECCTTCCCEEEEECT
T ss_pred CCCeEEEEEecCCCCCceeEEEec
Confidence 87655422 11 23689999884
No 60
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.82 E-value=7.3e-08 Score=91.68 Aligned_cols=136 Identities=9% Similarity=0.036 Sum_probs=93.2
Q ss_pred CCceEEEEcCCCcEEEEECC------CCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCC-
Q 014345 21 IEPYSVEVLPGGELLILDSA------NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN- 93 (426)
Q Consensus 21 ~~P~GIaVd~dG~LYVaD~~------n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~- 93 (426)
..|++|+++++|+|||++.. ++.|++++.++ +.+..+.. .+..|++|+++++|+
T Consensus 135 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~----------------~~~~~~~i~~~~dg~~ 195 (333)
T 2dg1_A 135 YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDF---RTVTPIIQ----------------NISVANGIALSTDEKV 195 (333)
T ss_dssp CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTS---CCEEEEEE----------------EESSEEEEEECTTSSE
T ss_pred CcccceEECCCCCEEEEeccccccCCCceEEEEeCCC---CEEEEeec----------------CCCcccceEECCCCCE
Confidence 46999999999999999875 47899998874 23333321 144589999999997
Q ss_pred EEEEECCCCEEEEEc-C--CCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCC
Q 014345 94 IYIADTMNMAIRKIS-D--SGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFD 169 (426)
Q Consensus 94 LYVADt~N~rIrk~d-~--g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~ 169 (426)
|||++..+++|.+++ + +.. ..+....... . .....|.+|+ ++++|+|||++..+++|.++++.+.
T Consensus 196 l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~-~---------~~~~~~~~i~-~d~~G~l~v~~~~~~~v~~~d~~g~ 264 (333)
T 2dg1_A 196 LWVTETTANRLHRIALEDDGVTIQPFGATIPYY-F---------TGHEGPDSCC-IDSDDNLYVAMYGQGRVLVFNKRGY 264 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEE-C---------CSSSEEEEEE-EBTTCCEEEEEETTTEEEEECTTSC
T ss_pred EEEEeCCCCeEEEEEecCCCcCcccccceEEEe-c---------CCCCCCCceE-ECCCCCEEEEEcCCCEEEEECCCCC
Confidence 999999889999998 2 332 2221000000 0 0013578888 7899999999998999999998654
Q ss_pred ceEeec-CCC------CcceEEEE
Q 014345 170 DCAYQY-GSS------FPLGIAVL 186 (426)
Q Consensus 170 ~~~~~~-~~g------~P~GIAv~ 186 (426)
...... ... .|.++++.
T Consensus 265 ~~~~~~~~~~~~g~~~~~~~~~~~ 288 (333)
T 2dg1_A 265 PIGQILIPGRDEGHMLRSTHPQFI 288 (333)
T ss_dssp EEEEEECTTGGGTCSCBCCEEEEC
T ss_pred EEEEEEcCCCccccccCcceEEEC
Confidence 332221 111 57778775
No 61
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.82 E-value=4.5e-08 Score=98.79 Aligned_cols=146 Identities=10% Similarity=0.082 Sum_probs=100.0
Q ss_pred CCceEEEEcC--CC--cEEEEECC--CCe--EEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCC
Q 014345 21 IEPYSVEVLP--GG--ELLILDSA--NSN--LYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG 92 (426)
Q Consensus 21 ~~P~GIaVd~--dG--~LYVaD~~--n~r--I~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG 92 (426)
..|+||.+.. +| .|||++.. +++ |++++.++ ...+.+... .| .+|+.|++++++++|
T Consensus 112 f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~----~~~~~~~~~-------~g----~~~~~pND~~v~~~G 176 (355)
T 3sre_A 112 FNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEE----KSLLHLKTI-------RH----KLLPSVNDIVAVGPE 176 (355)
T ss_dssp CCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTT----TEEEEEEEE-------CC----TTCSSEEEEEEEETT
T ss_pred eeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCC----CEEEEEecc-------cc----CCCCCCceEEEeCCC
Confidence 4899999955 45 49999986 344 66667663 223333321 11 248999999999999
Q ss_pred CEEEEEC-----------------CCCEEEEEcCCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEE
Q 014345 93 NIYIADT-----------------MNMAIRKISDSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVI 154 (426)
Q Consensus 93 ~LYVADt-----------------~N~rIrk~d~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G-~LYVa 154 (426)
.+||++. ..++|.+++.+.++.++. .+..|+||++ ++++ .|||+
T Consensus 177 ~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~~~-----------------~l~~pNGia~-spDg~~lYva 238 (355)
T 3sre_A 177 HFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAE-----------------GFDFANGINI-SPDGKYVYIA 238 (355)
T ss_dssp EEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEEEE-----------------EESSEEEEEE-CTTSSEEEEE
T ss_pred CEEecCCcEeCCcccccchhhccCCccEEEEEECCeEEEeec-----------------CCcccCcceE-CCCCCEEEEE
Confidence 9999975 235677777655555543 3567999995 6665 89999
Q ss_pred ECCCCeEEEEEcCCCc-eE---eecCCCCcceEEEEecCCceEEEEEEEecc
Q 014345 155 DRGNRAIREIQLHFDD-CA---YQYGSSFPLGIAVLLAAGFFGYMLALLQRR 202 (426)
Q Consensus 155 DsgN~rIr~I~l~~~~-~~---~~~~~g~P~GIAv~~g~g~~Gy~~a~lq~~ 202 (426)
|+..++|++++.+... .. .....+.|.|++++.. .|.+|....+.
T Consensus 239 dt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e---~G~lwva~~~~ 287 (355)
T 3sre_A 239 ELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPV---TGDLWVGCHPN 287 (355)
T ss_dssp EGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTT---TCCEEEEEESC
T ss_pred eCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCC---CCcEEEEecCC
Confidence 9999999999986432 11 1233478999999952 24566655544
No 62
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.77 E-value=1e-07 Score=98.59 Aligned_cols=159 Identities=18% Similarity=0.244 Sum_probs=105.8
Q ss_pred eecCCcEEEEEecCCCCCCCceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCC
Q 014345 3 KFESGYTVETVFDGSKLGIEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNH 82 (426)
Q Consensus 3 k~~~G~tv~tv~~g~~l~~~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~ 82 (426)
...+|+.++.++.+.. .|.+|+++++|.|||++...++|++++... +....++.-....... . ....
T Consensus 12 ~~~~gf~~~~~a~~l~---~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~---g~~~~~~~~~~~~~~~-~------g~~G 78 (454)
T 1cru_A 12 AKSENFDKKVILSNLN---KPHALLWGPDNQIWLTERATGKILRVNPES---GSVKTVFQVPEIVNDA-D------GQNG 78 (454)
T ss_dssp CCCTTSCEEEEECCCS---SEEEEEECTTSCEEEEETTTCEEEEECTTT---CCEEEEEECTTCCCCT-T------SSCS
T ss_pred CCCCCeEEEEEECCCC---CceEEEEcCCCcEEEEEcCCCEEEEEECCC---CcEeEEecCCcccccc-C------CCCc
Confidence 3567899999997633 899999999999999998778999998752 3445554332111000 0 1234
Q ss_pred cceEEEcC----CCCEEEEECC------------CCEEEEEc-CC-C--c---EEEeCCccCCCCCCCCCCcccccCCCC
Q 014345 83 PKGLTVDD----RGNIYIADTM------------NMAIRKIS-DS-G--V---TTIAGGKWGRGGGHVDGPSEDAKFSND 139 (426)
Q Consensus 83 P~GIaVd~----dG~LYVADt~------------N~rIrk~d-~g-~--V---stIaGg~~g~~~G~~dG~~~~a~f~~P 139 (426)
+.|||+++ +|.|||+++. ..+|.+++ +. . + .++.-.... ...-.+
T Consensus 79 llgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~------------~~~H~~ 146 (454)
T 1cru_A 79 LLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPS------------SKDHQS 146 (454)
T ss_dssp EEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECC------------CSSCCE
T ss_pred eeEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCC------------CCCCCC
Confidence 68999998 7899999964 45788887 22 1 1 233321000 012357
Q ss_pred CeeEEECCCCeEEEEEC--C------------------------------CCeEEEEEcCCC------------ceEeec
Q 014345 140 FDVVYIGSSCSLLVIDR--G------------------------------NRAIREIQLHFD------------DCAYQY 175 (426)
Q Consensus 140 ~gIa~vd~~G~LYVaDs--g------------------------------N~rIr~I~l~~~------------~~~~~~ 175 (426)
.+|+ ++++|.|||+-- + .++|.+|++++. ...+..
T Consensus 147 ~~l~-f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~ 225 (454)
T 1cru_A 147 GRLV-IGPDQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTL 225 (454)
T ss_dssp EEEE-ECTTSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEB
T ss_pred CeEe-ECCCCeEEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEE
Confidence 8888 689999999842 1 368999998764 123445
Q ss_pred CCCCcceEEEEe
Q 014345 176 GSSFPLGIAVLL 187 (426)
Q Consensus 176 ~~g~P~GIAv~~ 187 (426)
+.-.|.|+|++.
T Consensus 226 G~RNp~gla~dp 237 (454)
T 1cru_A 226 GHRNPQGLAFTP 237 (454)
T ss_dssp CCSEEEEEEECT
T ss_pred CCCCcceEEECC
Confidence 556788888875
No 63
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.70 E-value=4.3e-07 Score=90.58 Aligned_cols=125 Identities=13% Similarity=0.099 Sum_probs=80.7
Q ss_pred CCceEEEEcCC----CcEEEEECC---C----CeEEEEeCCCC--cccccEEEe-cCCCCcccccCCcccccccCCcceE
Q 014345 21 IEPYSVEVLPG----GELLILDSA---N----SNLYRISSSLS--LYSRPKLVA-GSAEGYSGHVDGKPREARMNHPKGL 86 (426)
Q Consensus 21 ~~P~GIaVd~d----G~LYVaD~~---n----~rI~kid~dg~--~~g~v~~va-G~~~G~~G~~dG~a~~A~Ln~P~GI 86 (426)
..|.||+++++ |.|||++.. + ++|.+++.++. .....++++ +.+ ......|.+|
T Consensus 73 ~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~------------~~~~h~~~~l 140 (354)
T 3a9g_A 73 AGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIP------------GAYIHNGGRI 140 (354)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEE------------CCSSCCCCCE
T ss_pred CceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCC------------CCCCcCCceE
Confidence 37999999996 889999974 3 79999987743 111223322 111 0125568999
Q ss_pred EEcCCCCEEEEECC-------------CCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECC-CCeE
Q 014345 87 TVDDRGNIYIADTM-------------NMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGS-SCSL 151 (426)
Q Consensus 87 aVd~dG~LYVADt~-------------N~rIrk~d-~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~-~G~L 151 (426)
+++++|.|||++.. +++|.+++ ++.+ ..+.. +.....-...+..|++|+ +++ +|.|
T Consensus 141 ~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~---p~~np-----f~~~~i~a~G~rnp~Gla-~d~~~g~l 211 (354)
T 3a9g_A 141 RFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRP---PADNP-----FPNSPIWSYGHRNPQGID-WHRASGVM 211 (354)
T ss_dssp EECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCC---CTTSS-----STTCCEEEECCSCCCEEE-ECTTTCCE
T ss_pred EECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCC---CCCCC-----CCCCcEEEEccCCcceEE-EeCCCCCE
Confidence 99999999999642 35888888 5542 10000 000011122367899999 576 8999
Q ss_pred EEEECCCCe---EEEEEc
Q 014345 152 LVIDRGNRA---IREIQL 166 (426)
Q Consensus 152 YVaDsgN~r---Ir~I~l 166 (426)
||+|.+.++ |..|..
T Consensus 212 ~v~d~g~~~~dei~~i~~ 229 (354)
T 3a9g_A 212 VATEHGPVGHDEVNIILK 229 (354)
T ss_dssp EEEECCSSSCCEEEEECT
T ss_pred EEEecCCCCCcEEEEecC
Confidence 999998765 665553
No 64
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.69 E-value=3.8e-07 Score=88.52 Aligned_cols=127 Identities=13% Similarity=0.085 Sum_probs=89.0
Q ss_pred CceEEEEcCCCcEEEEECC-CCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECC
Q 014345 22 EPYSVEVLPGGELLILDSA-NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 100 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~-n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~ 100 (426)
.|.+|++ .++.|||++.+ .+.|.+||.... ++...+.. -..|.+|+++++|++||++.+
T Consensus 132 ~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~---~~~~~i~~----------------g~~p~~i~~~~dG~l~v~~~~ 191 (328)
T 3dsm_A 132 STEQMVQ-YGKYVYVNCWSYQNRILKIDTETD---KVVDELTI----------------GIQPTSLVMDKYNKMWTITDG 191 (328)
T ss_dssp BCCCEEE-ETTEEEEEECTTCCEEEEEETTTT---EEEEEEEC----------------SSCBCCCEECTTSEEEEEBCC
T ss_pred CcceEEE-ECCEEEEEcCCCCCEEEEEECCCC---eEEEEEEc----------------CCCccceEEcCCCCEEEEECC
Confidence 7999999 57889999984 889999998742 22222111 124899999999999999987
Q ss_pred C----------CEEEEEcC--CCcE-EEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 014345 101 N----------MAIRKISD--SGVT-TIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 167 (426)
Q Consensus 101 N----------~rIrk~d~--g~Vs-tIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~ 167 (426)
+ +.|.++|. +.+. ++.-. .+ ..|++|++..+.+.|||++. .|.++++.
T Consensus 192 ~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~-~g---------------~~p~~la~~~d~~~lyv~~~---~v~~~d~~ 252 (328)
T 3dsm_A 192 GYEGSPYGYEAPSLYRIDAETFTVEKQFKFK-LG---------------DWPSEVQLNGTRDTLYWINN---DIWRMPVE 252 (328)
T ss_dssp BCTTCSSCBCCCEEEEEETTTTEEEEEEECC-TT---------------CCCEEEEECTTSCEEEEESS---SEEEEETT
T ss_pred CccCCccccCCceEEEEECCCCeEEEEEecC-CC---------------CCceeEEEecCCCEEEEEcc---EEEEEECC
Confidence 6 89999993 3343 33210 00 26899995434678999986 89999987
Q ss_pred CCceEe---ec-CCCCcceEEEEe
Q 014345 168 FDDCAY---QY-GSSFPLGIAVLL 187 (426)
Q Consensus 168 ~~~~~~---~~-~~g~P~GIAv~~ 187 (426)
...... .. ....|.||+++.
T Consensus 253 t~~~~~~~~~~~~~~~p~gi~vdp 276 (328)
T 3dsm_A 253 ADRVPVRPFLEFRDTKYYGLTVNP 276 (328)
T ss_dssp CSSCCSSCSBCCCSSCEEEEEECT
T ss_pred CCceeeeeeecCCCCceEEEEEcC
Confidence 654321 11 135799999974
No 65
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.61 E-value=1.3e-06 Score=84.65 Aligned_cols=130 Identities=13% Similarity=0.163 Sum_probs=89.1
Q ss_pred CCceEEEEcCCCcEEEEECC------CCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCC-
Q 014345 21 IEPYSVEVLPGGELLILDSA------NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN- 93 (426)
Q Consensus 21 ~~P~GIaVd~dG~LYVaD~~------n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~- 93 (426)
..|++++++++|+|||++.. .+.|++++ + +.+..+... +..|++|+++++|+
T Consensus 134 ~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~----g~~~~~~~~----------------~~~~~~i~~s~dg~~ 192 (326)
T 2ghs_A 134 NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-K----GKVTKLFAD----------------ISIPNSICFSPDGTT 192 (326)
T ss_dssp EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-T----TEEEEEEEE----------------ESSEEEEEECTTSCE
T ss_pred CCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-C----CcEEEeeCC----------------CcccCCeEEcCCCCE
Confidence 36899999999999999853 46899998 5 334433211 34589999999986
Q ss_pred EEEEECCCCEEEEEc-C--CC--c---EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEE
Q 014345 94 IYIADTMNMAIRKIS-D--SG--V---TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQ 165 (426)
Q Consensus 94 LYVADt~N~rIrk~d-~--g~--V---stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~ 165 (426)
|||+|+.+++|.+++ + .+ + ..+.... .....|.+++ +|.+|+|||++.++++|.+++
T Consensus 193 lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~--------------~~~~~p~gi~-~d~~G~lwva~~~~~~v~~~d 257 (326)
T 2ghs_A 193 GYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDST--------------GIKGGMDGSV-CDAEGHIWNARWGEGAVDRYD 257 (326)
T ss_dssp EEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECT--------------TSSSEEEEEE-ECTTSCEEEEEETTTEEEEEC
T ss_pred EEEEECCCCEEEEEEcccccCCcccCceEEEECC--------------CCCCCCCeeE-ECCCCCEEEEEeCCCEEEEEC
Confidence 999999999999998 3 22 1 1121100 0112577888 799999999999889999999
Q ss_pred cCCCceEe-ecCCCCcceEEEE
Q 014345 166 LHFDDCAY-QYGSSFPLGIAVL 186 (426)
Q Consensus 166 l~~~~~~~-~~~~g~P~GIAv~ 186 (426)
+.+..... ......|.++++.
T Consensus 258 ~~g~~~~~i~~~~~~~~~~af~ 279 (326)
T 2ghs_A 258 TDGNHIARYEVPGKQTTCPAFI 279 (326)
T ss_dssp TTCCEEEEEECSCSBEEEEEEE
T ss_pred CCCCEEEEEECCCCCcEEEEEe
Confidence 86543322 2222345566654
No 66
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.56 E-value=1.5e-06 Score=83.10 Aligned_cols=125 Identities=16% Similarity=0.164 Sum_probs=84.7
Q ss_pred CCceEEEEcCCCcEEEEECC--CCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCC-EEEE
Q 014345 21 IEPYSVEVLPGGELLILDSA--NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIA 97 (426)
Q Consensus 21 ~~P~GIaVd~dG~LYVaD~~--n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LYVA 97 (426)
..|.+|++++||.||+++.. ++.|+.++.++ +....+.... .....|.+|+++++|+ ||++
T Consensus 40 ~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~---g~~~~~~~~~-------------~~~~~p~~~a~spdg~~l~~~ 103 (347)
T 3hfq_A 40 QNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDG---QTAHKLNTVV-------------APGTPPAYVAVDEARQLVYSA 103 (347)
T ss_dssp SCCCCEEECTTCEEEEEEEETTEEEEEEEEEET---TEEEEEEEEE-------------EESCCCSEEEEETTTTEEEEE
T ss_pred CCcceEEEccCCeEEEEEecCCCceEEEEEecC---CcEEEeeeee-------------cCCCCCEEEEECCCCCEEEEE
Confidence 37999999999999999863 57898888764 2332222100 0134599999999997 9999
Q ss_pred ECCCCEEEEEc---CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 014345 98 DTMNMAIRKIS---DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 167 (426)
Q Consensus 98 Dt~N~rIrk~d---~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~ 167 (426)
+..++.|+.++ ++....+..... . + .++........|++++ ++++|.||+++.++++|+.+++.
T Consensus 104 ~~~~~~v~v~~~~~~g~~~~~~~~~~-~--~--~~p~~~~~~~~~~~~~-~spdg~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 104 NYHKGTAEVMKIAADGALTLTDTVQH-S--G--HGPRPEQDGSHIHYTD-LTPDNRLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp ETTTTEEEEEEECTTSCEEEEEEEEC-C--C--CCSSTTCSSCCEEEEE-ECTTSCEEEEETTTTEEEEEEEC
T ss_pred eCCCCEEEEEEeCCCCCeeecceeec-C--C--CCCCccccCCCceEEE-ECCCCcEEEEeCCCCEEEEEEEC
Confidence 98888888887 233333321100 0 0 0111112345678888 68888899999999999999987
No 67
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.55 E-value=8.6e-08 Score=96.73 Aligned_cols=110 Identities=15% Similarity=0.101 Sum_probs=79.8
Q ss_pred CCCCceEEEEcCCCcEEEEEC-----------------CCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccC
Q 014345 19 LGIEPYSVEVLPGGELLILDS-----------------ANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMN 81 (426)
Q Consensus 19 l~~~P~GIaVd~dG~LYVaD~-----------------~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln 81 (426)
..+.|++++++++|.+||++. ..++|+++++. .++.++.. |.
T Consensus 163 ~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~-----~~~~~~~~----------------l~ 221 (355)
T 3sre_A 163 LLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN-----DVRVVAEG----------------FD 221 (355)
T ss_dssp TCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT-----CCEEEEEE----------------ES
T ss_pred CCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC-----eEEEeecC----------------Cc
Confidence 345899999999999999874 24689998873 34555432 77
Q ss_pred CcceEEEcCCC-CEEEEECCCCEEEEEc-C--CCcEE--EeCCccCCCCCCCCCCcccccCCCCCeeEEECC-CCeEEEE
Q 014345 82 HPKGLTVDDRG-NIYIADTMNMAIRKIS-D--SGVTT--IAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGS-SCSLLVI 154 (426)
Q Consensus 82 ~P~GIaVd~dG-~LYVADt~N~rIrk~d-~--g~Vst--IaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~-~G~LYVa 154 (426)
.|+|||+++|| .|||||+..++|++++ + +.+.. +.. . -..|-+++ +|. +|+|||+
T Consensus 222 ~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~------~-----------~g~PDGi~-vD~e~G~lwva 283 (355)
T 3sre_A 222 FANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS------F-----------DTLVDNIS-VDPVTGDLWVG 283 (355)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE------C-----------SSEEEEEE-ECTTTCCEEEE
T ss_pred ccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe------C-----------CCCCceEE-EeCCCCcEEEE
Confidence 89999999998 5999999999999998 3 33321 110 0 12588898 798 5999996
Q ss_pred E-CCCCeEEEEEcC
Q 014345 155 D-RGNRAIREIQLH 167 (426)
Q Consensus 155 D-sgN~rIr~I~l~ 167 (426)
. .+..+|.+++++
T Consensus 284 ~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 284 CHPNGMRIFFYDAE 297 (355)
T ss_dssp EESCHHHHHSCCTT
T ss_pred ecCCceEEEEECCC
Confidence 6 455566655544
No 68
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.52 E-value=9.8e-07 Score=88.46 Aligned_cols=131 Identities=20% Similarity=0.186 Sum_probs=85.7
Q ss_pred CceEEEE---cCCCcEEE-EEC------------CCCeEEEEeCCCCcccccEEEecCCCCcccccCC--cccccccCCc
Q 014345 22 EPYSVEV---LPGGELLI-LDS------------ANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDG--KPREARMNHP 83 (426)
Q Consensus 22 ~P~GIaV---d~dG~LYV-aD~------------~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG--~a~~A~Ln~P 83 (426)
.|.||.+ |++|.||| +|. +.+.|+++|.+++..++....+.-. +..++ ......+..+
T Consensus 64 ~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~----~~~~~~~~~~g~~~~~~ 139 (334)
T 2p9w_A 64 QMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFE----KVQDEFEKKAGKRPFGV 139 (334)
T ss_dssp EEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESH----HHHHHHHHHHSSCCEEE
T ss_pred eeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCc----cccccccccccccccCC
Confidence 5799999 78999998 552 3578999998832223444443311 00000 0000124458
Q ss_pred ceEEEcCCCCEEEEECCC-CEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCe
Q 014345 84 KGLTVDDRGNIYIADTMN-MAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRA 160 (426)
Q Consensus 84 ~GIaVd~dG~LYVADt~N-~rIrk~d-~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~r 160 (426)
++|++|++|++||+|+.. ..|.+++ +|. +....-. .. .......++||++.++...|+|++. .++
T Consensus 140 nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~-~~----------~~~~~~G~nGIv~~pdg~~Liv~~~-~g~ 207 (334)
T 2p9w_A 140 VQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWE-SG----------NGGQRPGYSGITFDPHSNKLIAFGG-PRA 207 (334)
T ss_dssp EEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEEC-CC----------CSSSCCSCSEEEEETTTTEEEEESS-SSS
T ss_pred ceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeec-CC----------CcccccCcceEEEeCCCCEEEEEcC-CCe
Confidence 999999999999999999 9999999 665 3333211 00 0113456899996555557888888 999
Q ss_pred EEEEEcCC
Q 014345 161 IREIQLHF 168 (426)
Q Consensus 161 Ir~I~l~~ 168 (426)
|.+|++..
T Consensus 208 L~~fD~~~ 215 (334)
T 2p9w_A 208 LTAFDVSK 215 (334)
T ss_dssp EEEEECSS
T ss_pred EEEEcCCC
Confidence 99999874
No 69
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.50 E-value=1.9e-06 Score=82.36 Aligned_cols=132 Identities=11% Similarity=0.025 Sum_probs=94.3
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
.|.+++++++|+++|++..+++|+.++.+| +.....+.. ..|.++++.++|+++|++..+
T Consensus 126 ~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G----~~~w~~~~~----------------~~~~~~~~~~~g~~~v~~~~~ 185 (276)
T 3no2_A 126 QFRQINKNKKGNYLVPLFATSEVREIAPNG----QLLNSVKLS----------------GTPFSSAFLDNGDCLVACGDA 185 (276)
T ss_dssp SCSCCEECTTSCEEEEETTTTEEEEECTTS----CEEEEEECS----------------SCCCEEEECTTSCEEEECBTT
T ss_pred cccCceECCCCCEEEEecCCCEEEEECCCC----CEEEEEECC----------------CCccceeEcCCCCEEEEeCCC
Confidence 577899999999999999999999999984 334433321 247889999999999999999
Q ss_pred CEEEEEc-C-CCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECC----------CCeEEEEEcCC
Q 014345 102 MAIRKIS-D-SGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRG----------NRAIREIQLHF 168 (426)
Q Consensus 102 ~rIrk~d-~-g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsg----------N~rIr~I~l~~ 168 (426)
++|..++ + |.+ -.+..... ....|..|.+++ +.++|+|||++.. +.++.+|+.++
T Consensus 186 ~~v~~~d~~tG~~~w~~~~~~~-----------~~~~l~~~~~~~-~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g 253 (276)
T 3no2_A 186 HCFVQLNLESNRIVRRVNANDI-----------EGVQLFFVAQLF-PLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEG 253 (276)
T ss_dssp SEEEEECTTTCCEEEEEEGGGS-----------BSCCCSEEEEEE-ECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTS
T ss_pred CeEEEEeCcCCcEEEEecCCCC-----------CCccccccccce-EcCCCCEEEEeccCccccccccCCceEEEECCCC
Confidence 9999999 4 554 33322100 012477899998 6889999999963 44688887766
Q ss_pred CceE-e--ecCCCCcceEEE
Q 014345 169 DDCA-Y--QYGSSFPLGIAV 185 (426)
Q Consensus 169 ~~~~-~--~~~~g~P~GIAv 185 (426)
..+= + ....+.+.+||.
T Consensus 254 ~~~W~~~~~~~~~~~~~~~~ 273 (276)
T 3no2_A 254 KVVWQLNDKVKFGMISTICP 273 (276)
T ss_dssp BEEEEECCTTTSCCCCEEEE
T ss_pred CEEEEecCcccccceeeeee
Confidence 4331 1 234456666654
No 70
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.50 E-value=4.6e-06 Score=79.63 Aligned_cols=121 Identities=10% Similarity=0.134 Sum_probs=81.7
Q ss_pred CCceEEEEcCCCc-EEEEECCCCeEEEEeCCCCcccccEEE---ecCCCCcccccCCcccccccCCcceEEEcCCCC-EE
Q 014345 21 IEPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPKLV---AGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IY 95 (426)
Q Consensus 21 ~~P~GIaVd~dG~-LYVaD~~n~rI~kid~dg~~~g~v~~v---aG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LY 95 (426)
..|.++++++||. ||+++...++|..++.+... +.+..+ ...+.+. .....|.+|+++++|+ ||
T Consensus 187 ~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~-g~~~~~~~~~~~~~~~----------~~~~~~~~i~~spdG~~l~ 255 (347)
T 3hfq_A 187 FGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQT-GAFTQLGIVKTIPADY----------TAHNGAAAIRLSHDGHFLY 255 (347)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEEETTT-TEEEEEEEEESSCTTC----------CSCCEEEEEEECTTSCEEE
T ss_pred CCCceEEECCCCCEEEEEeCCCCEEEEEEecCCC-CceEEeeeeeecCCCC----------CCCCcceeEEECCCCCEEE
Confidence 4699999999998 99999988988888765211 232222 1111111 1134589999999997 89
Q ss_pred EEECCCCEEEEEc-C--CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECCCCeEEEEEcC
Q 014345 96 IADTMNMAIRKIS-D--SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRGNRAIREIQLH 167 (426)
Q Consensus 96 VADt~N~rIrk~d-~--g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaDsgN~rIr~I~l~ 167 (426)
|++..++.|.+++ + +....+..... .-..|.+++ ++++| .||+++.+++.|..++.+
T Consensus 256 v~~~~~~~v~v~~~~~~g~~~~~~~~~~--------------~~~~~~~~~-~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 256 VSNRGYNTLAVFAVTADGHLTLIQQIST--------------EGDFPRDFD-LDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp EEEETTTEEEEEEECGGGCEEEEEEEEC--------------SSSCCCEEE-ECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEeCCCCEEEEEEECCCCcEEEeEEEec--------------CCCCcCeEE-ECCCCCEEEEEEcCCCcEEEEEEe
Confidence 9999889999888 3 23333321100 012588998 56777 599999998999888654
No 71
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.49 E-value=2.5e-06 Score=81.58 Aligned_cols=136 Identities=13% Similarity=0.145 Sum_probs=93.1
Q ss_pred CceEEEEcCCCcEEEEECC-CCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECC
Q 014345 22 EPYSVEVLPGGELLILDSA-NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 100 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~-n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~ 100 (426)
..+++.+.+||+++|++.. +++|+.++++|.. +..+ +...+. ...+..|.+++++++|+++|++..
T Consensus 78 ~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~---l~~~-~~~~~~---------~~~~~~~~~v~~~~~G~~lv~~~~ 144 (276)
T 3no2_A 78 EMQTARILPDGNALVAWCGHPSTILEVNMKGEV---LSKT-EFETGI---------ERPHAQFRQINKNKKGNYLVPLFA 144 (276)
T ss_dssp EEEEEEECTTSCEEEEEESTTEEEEEECTTSCE---EEEE-EECCSC---------SSGGGSCSCCEECTTSCEEEEETT
T ss_pred cccccEECCCCCEEEEecCCCCEEEEEeCCCCE---EEEE-eccCCC---------CcccccccCceECCCCCEEEEecC
Confidence 3567788889999999987 8899999887532 2222 111010 112456889999999999999999
Q ss_pred CCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEeec-C--
Q 014345 101 NMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQY-G-- 176 (426)
Q Consensus 101 N~rIrk~d-~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~~~~-~-- 176 (426)
+++|..++ +|.+.-..+.. ..|++++ ...+|+++|++..+++|..+++......... .
T Consensus 145 ~~~v~~~d~~G~~~w~~~~~-----------------~~~~~~~-~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~ 206 (276)
T 3no2_A 145 TSEVREIAPNGQLLNSVKLS-----------------GTPFSSA-FLDNGDCLVACGDAHCFVQLNLESNRIVRRVNAND 206 (276)
T ss_dssp TTEEEEECTTSCEEEEEECS-----------------SCCCEEE-ECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGG
T ss_pred CCEEEEECCCCCEEEEEECC-----------------CCcccee-EcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCC
Confidence 99999999 65543222210 1467777 5788999999999999999999843332211 1
Q ss_pred -----CCCcceEEEEec
Q 014345 177 -----SSFPLGIAVLLA 188 (426)
Q Consensus 177 -----~g~P~GIAv~~g 188 (426)
...|.+++++..
T Consensus 207 ~~~~~l~~~~~~~~~~~ 223 (276)
T 3no2_A 207 IEGVQLFFVAQLFPLQN 223 (276)
T ss_dssp SBSCCCSEEEEEEECTT
T ss_pred CCCccccccccceEcCC
Confidence 123667777644
No 72
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.39 E-value=7e-06 Score=79.47 Aligned_cols=107 Identities=19% Similarity=0.201 Sum_probs=73.9
Q ss_pred CceEEEEcCCCc-EEEEECCCCeEEEEeCC--CC-cccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEE
Q 014345 22 EPYSVEVLPGGE-LLILDSANSNLYRISSS--LS-LYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIA 97 (426)
Q Consensus 22 ~P~GIaVd~dG~-LYVaD~~n~rI~kid~d--g~-~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVA 97 (426)
.|+++++++||+ ||++|..+++|++++.+ .+ .......+.... . ....|.|+++|++|+|||+
T Consensus 180 ~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~-~------------~~~~p~gi~~d~~G~lwva 246 (326)
T 2ghs_A 180 IPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDST-G------------IKGGMDGSVCDAEGHIWNA 246 (326)
T ss_dssp SEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECT-T------------SSSEEEEEEECTTSCEEEE
T ss_pred ccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECC-C------------CCCCCCeeEECCCCCEEEE
Confidence 689999999996 89999999999999864 22 111222222110 0 0124899999999999999
Q ss_pred ECCCCEEEEEc-CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEE-CCCCeEEEEECCC
Q 014345 98 DTMNMAIRKIS-DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYI-GSSCSLLVIDRGN 158 (426)
Q Consensus 98 Dt~N~rIrk~d-~g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~v-d~~G~LYVaDsgN 158 (426)
+..+++|.+++ ++.+ .++... ...|.++++. ++.+.|||+....
T Consensus 247 ~~~~~~v~~~d~~g~~~~~i~~~-----------------~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 247 RWGEGAVDRYDTDGNHIARYEVP-----------------GKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp EETTTEEEEECTTCCEEEEEECS-----------------CSBEEEEEEESTTSCEEEEEEBCT
T ss_pred EeCCCEEEEECCCCCEEEEEECC-----------------CCCcEEEEEecCCCCEEEEEecCC
Confidence 98889999999 5554 333221 1247788865 3446899988655
No 73
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.38 E-value=5e-06 Score=83.35 Aligned_cols=151 Identities=10% Similarity=-0.019 Sum_probs=95.9
Q ss_pred CceEEEEcC-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEE---cCCCCEEE-
Q 014345 22 EPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTV---DDRGNIYI- 96 (426)
Q Consensus 22 ~P~GIaVd~-dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaV---d~dG~LYV- 96 (426)
+|.|++.|+ +|.+||++..+++|.+++++++ ....+ ...+... +|. ...+|.||.+ |++|.|+|
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~---~~~~~--~~~~~s~--~g~----~~~~~sGl~~~~~D~~grL~vv 82 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQ---SHFNV--VIDGASS--NGD----GEQQMSGLSLLTHDNSKRLFAV 82 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTC---CEEEE--CCTTTCC--SSC----CSEEEEEEEESSSSSCCEEEEE
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCC---eEEEE--ecCCccc--cCC----CcceeeEEEEeccCCCCcEEEE
Confidence 699999987 7889999999999999999742 22222 1112110 011 1335789999 78899998
Q ss_pred EEC------------CCCEEEEEc-C----CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCC-
Q 014345 97 ADT------------MNMAIRKIS-D----SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGN- 158 (426)
Q Consensus 97 ADt------------~N~rIrk~d-~----g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN- 158 (426)
+|. +.+.|.++| + +.....+.-..-. .+.. ......+..+++|+ +|.+|++||+|+..
T Consensus 83 ~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~-~~~~--~~~g~~~~~~nDva-vD~~GnaYVt~s~~~ 158 (334)
T 2p9w_A 83 MKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQ-DEFE--KKAGKRPFGVVQSA-QDRDGNSYVAFALGM 158 (334)
T ss_dssp EEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHH-HHHH--HHHSSCCEEEEEEE-ECTTSCEEEEEEESS
T ss_pred EcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCcccc-cccc--ccccccccCCceeE-ECCCCCEEEeCCCCC
Confidence 662 357899999 6 4443333310000 0000 00000234588998 89999999999999
Q ss_pred CeEEEEEcCCCceEe-ecCC------CCcceEEEEe
Q 014345 159 RAIREIQLHFDDCAY-QYGS------SFPLGIAVLL 187 (426)
Q Consensus 159 ~rIr~I~l~~~~~~~-~~~~------g~P~GIAv~~ 187 (426)
+.|.++++++..... .... ..+.||+...
T Consensus 159 ~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~p 194 (334)
T 2p9w_A 159 PAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDP 194 (334)
T ss_dssp CEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEET
T ss_pred CeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeC
Confidence 999999999864432 1111 1256888773
No 74
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.34 E-value=2.1e-05 Score=73.98 Aligned_cols=140 Identities=13% Similarity=0.210 Sum_probs=91.0
Q ss_pred CCceEEEEcCCCc-EEEEECCCCeEEEEeCCCCcc-cccEEEecCCCCcccccCCcccccccCCcceEEEcCCCC-EEEE
Q 014345 21 IEPYSVEVLPGGE-LLILDSANSNLYRISSSLSLY-SRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIA 97 (426)
Q Consensus 21 ~~P~GIaVd~dG~-LYVaD~~n~rI~kid~dg~~~-g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LYVA 97 (426)
..|.+++++++|+ ||+++..++.|..++...... ..+..+.. -..|.+++++++|+ ||++
T Consensus 176 ~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-----------------~~~~~~~~~spdg~~l~v~ 238 (331)
T 3u4y_A 176 TRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT-----------------NNLPGTIVVSRDGSTVYVL 238 (331)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-----------------SSCCCCEEECTTSSEEEEE
T ss_pred CCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC-----------------CCCCceEEECCCCCEEEEE
Confidence 4699999999997 999999999999999874221 00222211 13488999999998 9999
Q ss_pred ECCCCEEEEEc-C-CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECCCCeEEEEEcCCCceEee
Q 014345 98 DTMNMAIRKIS-D-SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRGNRAIREIQLHFDDCAYQ 174 (426)
Q Consensus 98 Dt~N~rIrk~d-~-g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaDsgN~rIr~I~l~~~~~~~~ 174 (426)
+...+.|..++ . +.+..+....... ..+ ........++++ .++| .|||+...++.|.++++......+.
T Consensus 239 ~~~~~~i~~~d~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~~~-spdg~~l~v~~~~~~~v~v~d~~~~~~~~~ 310 (331)
T 3u4y_A 239 TESTVDVFNFNQLSGTLSFVKSFGHGL---LID----PRPLFGANQMAL-NKTETKLFISANISRELKVFTISGKVVGYV 310 (331)
T ss_dssp CSSEEEEEEEETTTTEEEEEEEEECCC---CCC----CGGGTTCCCEEE-CTTSSEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred EcCCCEEEEEECCCCceeeeccccccc---ccC----CCCcccccceEE-CCCCCEEEEecCCCCcEEEEEecCCcccce
Confidence 98888999999 3 3343332111000 000 011112256774 5555 6899999999999999987666555
Q ss_pred cCCCCcceEEE
Q 014345 175 YGSSFPLGIAV 185 (426)
Q Consensus 175 ~~~g~P~GIAv 185 (426)
......-++++
T Consensus 311 ~~~~~~g~~~~ 321 (331)
T 3u4y_A 311 AGIEANGGIAI 321 (331)
T ss_dssp TTCCCBSCEEE
T ss_pred ecccccCCeEE
Confidence 44433444443
No 75
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.32 E-value=3.2e-05 Score=74.99 Aligned_cols=148 Identities=12% Similarity=-0.031 Sum_probs=94.9
Q ss_pred cCCcEEEEEecCCCCCCCceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcc
Q 014345 5 ESGYTVETVFDGSKLGIEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPK 84 (426)
Q Consensus 5 ~~G~tv~tv~~g~~l~~~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~ 84 (426)
..|..+..+.-+.. ..+.|++++ .+.||++...+++|.++|.+... .+..+. . + . ..+.
T Consensus 52 ~tg~v~~~i~l~~~--~fgeGi~~~-g~~lyv~t~~~~~v~viD~~t~~--v~~~i~-~--g-~------------~~g~ 110 (266)
T 2iwa_A 52 QTGKVENIHKMDDS--YFGEGLTLL-NEKLYQVVWLKNIGFIYDRRTLS--NIKNFT-H--Q-M------------KDGW 110 (266)
T ss_dssp TTCCEEEEEECCTT--CCEEEEEEE-TTEEEEEETTCSEEEEEETTTTE--EEEEEE-C--C-S------------SSCC
T ss_pred CCCCEEEEEecCCC--cceEEEEEe-CCEEEEEEecCCEEEEEECCCCc--EEEEEE-C--C-C------------CCeE
Confidence 34555554443222 246678887 45899999999999999987421 122221 0 1 0 0245
Q ss_pred eEEEcCCCCEEEEECCCCEEEEEcCC--C-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeE
Q 014345 85 GLTVDDRGNIYIADTMNMAIRKISDS--G-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAI 161 (426)
Q Consensus 85 GIaVd~dG~LYVADt~N~rIrk~d~g--~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rI 161 (426)
||+.| .+.+|++| +.++|.++|.. . +.++.-+..+. .+..|+++.++ +|.||++....+.|
T Consensus 111 glt~D-g~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~------------p~~~~nele~~--dg~lyvn~~~~~~V 174 (266)
T 2iwa_A 111 GLATD-GKILYGSD-GTSILYEIDPHTFKLIKKHNVKYNGH------------RVIRLNELEYI--NGEVWANIWQTDCI 174 (266)
T ss_dssp EEEEC-SSSEEEEC-SSSEEEEECTTTCCEEEEEECEETTE------------ECCCEEEEEEE--TTEEEEEETTSSEE
T ss_pred EEEEC-CCEEEEEC-CCCeEEEEECCCCcEEEEEEECCCCc------------ccccceeEEEE--CCEEEEecCCCCeE
Confidence 66665 35799999 57899999933 3 34444321111 24568899876 58999999999999
Q ss_pred EEEEcCCCceEeecC---------------CCCcceEEEEecC
Q 014345 162 REIQLHFDDCAYQYG---------------SSFPLGIAVLLAA 189 (426)
Q Consensus 162 r~I~l~~~~~~~~~~---------------~g~P~GIAv~~g~ 189 (426)
.+|++....+.-.-. ...|.|||.+...
T Consensus 175 ~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~ 217 (266)
T 2iwa_A 175 ARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQEN 217 (266)
T ss_dssp EEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTT
T ss_pred EEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCC
Confidence 999998766532111 1357899998653
No 76
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.29 E-value=4e-05 Score=72.16 Aligned_cols=141 Identities=13% Similarity=0.149 Sum_probs=92.8
Q ss_pred CCceEEEEcCCCc-EEEEECC------CCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCC
Q 014345 21 IEPYSVEVLPGGE-LLILDSA------NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN 93 (426)
Q Consensus 21 ~~P~GIaVd~dG~-LYVaD~~------n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~ 93 (426)
..|++++++++|+ ||+++.. .+.|.+++..+. +....... -..|.+++++++|+
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~---~~~~~~~~----------------~~~~~~~~~s~dg~ 101 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTL---EVTQAIHN----------------DLKPFGATINNTTQ 101 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTC---CEEEEEEE----------------SSCCCSEEEETTTT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCC---eEEEEEec----------------CCCcceEEECCCCC
Confidence 3699999999875 8999866 568999998742 22222111 11388999999987
Q ss_pred -EEEEECCCCEEEEEc--CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEEC-CCCeEEEEEcCC
Q 014345 94 -IYIADTMNMAIRKIS--DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDR-GNRAIREIQLHF 168 (426)
Q Consensus 94 -LYVADt~N~rIrk~d--~g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDs-gN~rIr~I~l~~ 168 (426)
+||++..++.|..++ .+.+ .++..+.... ........|.++++.++.+.||+++. .+++|.++++..
T Consensus 102 ~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~ 173 (353)
T 3vgz_A 102 TLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKR--------TEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGN 173 (353)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEESCCCCC--------CSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTT
T ss_pred EEEEEecCCCEEEEEeCCCCeeEEEEecCCCcc--------ccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCC
Confidence 999999999999999 3443 4443321100 00111234788885444457999995 478899999987
Q ss_pred CceEeec--CCCCcceEEEEec
Q 014345 169 DDCAYQY--GSSFPLGIAVLLA 188 (426)
Q Consensus 169 ~~~~~~~--~~g~P~GIAv~~g 188 (426)
....... ....|.++++...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~s~d 195 (353)
T 3vgz_A 174 IKLKTAIQNTGKMSTGLALDSE 195 (353)
T ss_dssp TEEEEEECCCCTTCCCCEEETT
T ss_pred CceEEEecCCCCccceEEECCC
Confidence 6654332 2234777777643
No 77
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.26 E-value=4.1e-05 Score=73.53 Aligned_cols=119 Identities=13% Similarity=0.182 Sum_probs=81.0
Q ss_pred CCCceEEEEcCCCc-EEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCC-EEEE
Q 014345 20 GIEPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIA 97 (426)
Q Consensus 20 ~~~P~GIaVd~dG~-LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LYVA 97 (426)
+..|.++++++||. ||+++..++.|..++.+. +.+..+.... ... ..+..|.+|+++++|+ ||++
T Consensus 210 ~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~---g~~~~~~~~~-~~~---------~~~~~~~~i~~spdg~~l~v~ 276 (361)
T 3scy_A 210 GSGPRHLIFNSDGKFAYLINEIGGTVIAFRYAD---GMLDEIQTVA-ADT---------VNAQGSGDIHLSPDGKYLYAS 276 (361)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTCEEEEEEEET---TEEEEEEEEE-SCS---------SCCCCEEEEEECTTSSEEEEE
T ss_pred CCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecC---CceEEeEEEe-cCC---------CCCCCcccEEECCCCCEEEEE
Confidence 34699999999997 899998889999998763 3332222110 000 1145688999999997 8899
Q ss_pred ECC-CCEEEEEc-C---CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECCCCeEEEEEcC
Q 014345 98 DTM-NMAIRKIS-D---SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRGNRAIREIQLH 167 (426)
Q Consensus 98 Dt~-N~rIrk~d-~---g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaDsgN~rIr~I~l~ 167 (426)
+.. ++.|..++ + +....+.....+ ..|.+++ ++++| .||+++..++.|..+..+
T Consensus 277 ~~~~~~~i~v~~~~~~~g~~~~~~~~~~g---------------~~~~~~~-~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 277 NRLKADGVAIFKVDETNGTLTKVGYQLTG---------------IHPRNFI-ITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp ECSSSCEEEEEEECTTTCCEEEEEEEECS---------------SCCCEEE-ECTTSCEEEEEETTTTEEEEEEEC
T ss_pred CCCCCCEEEEEEEcCCCCcEEEeeEecCC---------------CCCceEE-ECCCCCEEEEEECCCCCEEEEEEE
Confidence 988 78888876 3 333333211001 2588998 56777 599999888999886544
No 78
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=98.24 E-value=1.6e-05 Score=80.00 Aligned_cols=124 Identities=11% Similarity=0.166 Sum_probs=78.6
Q ss_pred CceEEEEcC----CCcEEEEEC--CCCeEEEEeCCCC-----cccccEEEe-cCCCCcccccCCcccccccCCcceEEEc
Q 014345 22 EPYSVEVLP----GGELLILDS--ANSNLYRISSSLS-----LYSRPKLVA-GSAEGYSGHVDGKPREARMNHPKGLTVD 89 (426)
Q Consensus 22 ~P~GIaVd~----dG~LYVaD~--~n~rI~kid~dg~-----~~g~v~~va-G~~~G~~G~~dG~a~~A~Ln~P~GIaVd 89 (426)
.|.|||++| +|.|||+.+ ..++|.|+..++. ......++. +.+. ........|+++
T Consensus 81 GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~------------~~~H~g~~l~fg 148 (347)
T 3das_A 81 GLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPK------------GVIHNGGRIAFG 148 (347)
T ss_dssp SEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECC------------CSSCCCCCEEEC
T ss_pred CceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCC------------CCCccCccccCC
Confidence 799999998 488999764 4579999977641 222334433 2211 013346789999
Q ss_pred CCCCEEEEEC-------------CCCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEE
Q 014345 90 DRGNIYIADT-------------MNMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVID 155 (426)
Q Consensus 90 ~dG~LYVADt-------------~N~rIrk~d-~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaD 155 (426)
++|.|||+-. ..++|.+++ ++.+. .+.. +.+...-...+.+|++|+ ++++|.||++|
T Consensus 149 pDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip--~~nP------f~~~~i~a~G~RNp~Gla-~dp~G~L~~~d 219 (347)
T 3das_A 149 PDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPA--PGNP------FPGSPVYSYGHRNVQGLA-WDDKQRLFASE 219 (347)
T ss_dssp TTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBC--TTCS------STTCCEEEBCCSBCCEEE-ECTTCCEEEEE
T ss_pred CCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCcc--CCCC------CCCCeEEeeCCCCcceEE-ECCCCCEEEEe
Confidence 9999999942 246788888 55421 0000 000111122477899999 57799999999
Q ss_pred CCCC---eEEEEEc
Q 014345 156 RGNR---AIREIQL 166 (426)
Q Consensus 156 sgN~---rIr~I~l 166 (426)
.+.. .|..|..
T Consensus 220 ~g~~~~deln~i~~ 233 (347)
T 3das_A 220 FGQDTWDELNAIKP 233 (347)
T ss_dssp CCSSSCEEEEEECT
T ss_pred cCCCCCceeeEEcC
Confidence 8763 5666653
No 79
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.22 E-value=3.8e-05 Score=72.21 Aligned_cols=118 Identities=13% Similarity=0.205 Sum_probs=81.7
Q ss_pred CCceEEEEcCCCc-EEEEECCCCe-EEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCC-EEEE
Q 014345 21 IEPYSVEVLPGGE-LLILDSANSN-LYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIA 97 (426)
Q Consensus 21 ~~P~GIaVd~dG~-LYVaD~~n~r-I~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LYVA 97 (426)
..|+++++++||+ ||+++...+. |..++.+.. +.+....... - ..-..|.+++++++|+ |||+
T Consensus 128 ~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~--g~~~~~~~~~-~-----------~~~~~~~~~~~spdg~~l~v~ 193 (331)
T 3u4y_A 128 YDAVGIAISPNGNGLILIDRSSANTVRRFKIDAD--GVLFDTGQEF-I-----------SGGTRPFNITFTPDGNFAFVA 193 (331)
T ss_dssp TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTT--CCEEEEEEEE-E-----------CSSSSEEEEEECTTSSEEEEE
T ss_pred CCccceEECCCCCEEEEEecCCCceEEEEEECCC--CcEeecCCcc-c-----------cCCCCccceEECCCCCEEEEE
Confidence 3699999999997 9999988777 776665421 2221111000 0 0012489999999997 9999
Q ss_pred ECCCCEEEEEc--CCCc----EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCe-EEEEECCCCeEEEEEcCCCc
Q 014345 98 DTMNMAIRKIS--DSGV----TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCS-LLVIDRGNRAIREIQLHFDD 170 (426)
Q Consensus 98 Dt~N~rIrk~d--~g~V----stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~-LYVaDsgN~rIr~I~l~~~~ 170 (426)
+..++.|++++ ++.+ .++..+ ..|.+++ ++++|. ||+++.+.+.|.++++....
T Consensus 194 ~~~~~~v~v~d~~~~~~~~~~~~~~~~------------------~~~~~~~-~spdg~~l~v~~~~~~~i~~~d~~~~~ 254 (331)
T 3u4y_A 194 NLIGNSIGILETQNPENITLLNAVGTN------------------NLPGTIV-VSRDGSTVYVLTESTVDVFNFNQLSGT 254 (331)
T ss_dssp ETTTTEEEEEECSSTTSCEEEEEEECS------------------SCCCCEE-ECTTSSEEEEECSSEEEEEEEETTTTE
T ss_pred eCCCCeEEEEECCCCcccceeeeccCC------------------CCCceEE-ECCCCCEEEEEEcCCCEEEEEECCCCc
Confidence 99999999999 3443 222211 2578888 567775 99999888999999987655
Q ss_pred e
Q 014345 171 C 171 (426)
Q Consensus 171 ~ 171 (426)
.
T Consensus 255 ~ 255 (331)
T 3u4y_A 255 L 255 (331)
T ss_dssp E
T ss_pred e
Confidence 4
No 80
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.21 E-value=0.00022 Score=67.06 Aligned_cols=134 Identities=12% Similarity=0.113 Sum_probs=88.9
Q ss_pred ceEEEEcCCCc-EEEEEC-CCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCC-EEEEEC
Q 014345 23 PYSVEVLPGGE-LLILDS-ANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADT 99 (426)
Q Consensus 23 P~GIaVd~dG~-LYVaD~-~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LYVADt 99 (426)
|.+++++++|+ ||+++. .+++|++++... ++....... . -..|.+++++++|+ ||+++.
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~---~~~~~~~~~--------~-------~~~~~~~~~s~dg~~l~~~~~ 204 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGN---IKLKTAIQN--------T-------GKMSTGLALDSEGKRLYTTNA 204 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTT---TEEEEEECC--------C-------CTTCCCCEEETTTTEEEEECT
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCC---CceEEEecC--------C-------CCccceEEECCCCCEEEEEcC
Confidence 89999999987 899984 578899999874 222222210 0 12488999999987 788876
Q ss_pred CCCEEEEEc--CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEeecC
Q 014345 100 MNMAIRKIS--DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQYG 176 (426)
Q Consensus 100 ~N~rIrk~d--~g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~~~~~ 176 (426)
++.|..++ ++.+ .++..+..+ .-..|.++++..+...||+++..++.|.++++..........
T Consensus 205 -~~~i~~~d~~~~~~~~~~~~~~~~-------------~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 270 (353)
T 3vgz_A 205 -DGELITIDTADNKILSRKKLLDDG-------------KEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVA 270 (353)
T ss_dssp -TSEEEEEETTTTEEEEEEECCCSS-------------SCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred -CCeEEEEECCCCeEEEEEEcCCCC-------------CCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 78999999 3333 233221100 122567788544445699999999999999997766544333
Q ss_pred CCCcceEEEEec
Q 014345 177 SSFPLGIAVLLA 188 (426)
Q Consensus 177 ~g~P~GIAv~~g 188 (426)
.+.|.++++...
T Consensus 271 ~~~~~~~~~s~d 282 (353)
T 3vgz_A 271 APESLAVLFNPA 282 (353)
T ss_dssp CSSCCCEEEETT
T ss_pred cCCCceEEECCC
Confidence 445666666533
No 81
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.20 E-value=6.6e-05 Score=72.83 Aligned_cols=148 Identities=15% Similarity=0.070 Sum_probs=94.2
Q ss_pred ecCCcEEEEEecCCCCCCCceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCc
Q 014345 4 FESGYTVETVFDGSKLGIEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHP 83 (426)
Q Consensus 4 ~~~G~tv~tv~~g~~l~~~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P 83 (426)
++.|..+..+.-.... ...||+++ ++.||++...+++++++|.+... .+..+.-. + .+
T Consensus 72 ~~Tgkv~~~~~l~~~~--FgeGit~~-g~~ly~ltw~~~~v~v~D~~t~~--~~~ti~~~-----~------------eG 129 (262)
T 3nol_A 72 IESGKTLQQIELGKRY--FGEGISDW-KDKIVGLTWKNGLGFVWNIRNLR--QVRSFNYD-----G------------EG 129 (262)
T ss_dssp TTTCCEEEEEECCTTC--CEEEEEEE-TTEEEEEESSSSEEEEEETTTCC--EEEEEECS-----S------------CC
T ss_pred CCCCcEEEEEecCCcc--ceeEEEEe-CCEEEEEEeeCCEEEEEECccCc--EEEEEECC-----C------------Cc
Confidence 3445555544332221 23667776 35899999999999999997421 22222110 0 24
Q ss_pred ceEEEcCCCCEEEEECCCCEEEEEcC--CC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCe
Q 014345 84 KGLTVDDRGNIYIADTMNMAIRKISD--SG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRA 160 (426)
Q Consensus 84 ~GIaVd~dG~LYVADt~N~rIrk~d~--g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~r 160 (426)
.|++.| .+.||++|. .++|+++|. .. +.+|.-+..+. .+..++.+.++ +|.||+..+..+.
T Consensus 130 ~glt~d-g~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~~g~------------~~~~lNELe~~--~G~lyan~w~~~~ 193 (262)
T 3nol_A 130 WGLTHN-DQYLIMSDG-TPVLRFLDPESLTPVRTITVTAHGE------------ELPELNELEWV--DGEIFANVWQTNK 193 (262)
T ss_dssp CCEEEC-SSCEEECCS-SSEEEEECTTTCSEEEEEECEETTE------------ECCCEEEEEEE--TTEEEEEETTSSE
T ss_pred eEEecC-CCEEEEECC-CCeEEEEcCCCCeEEEEEEeccCCc------------cccccceeEEE--CCEEEEEEccCCe
Confidence 678876 368999995 789999993 33 34443221111 24456677765 6899999999999
Q ss_pred EEEEEcCCCceEee-c-------------CCCCcceEEEEecC
Q 014345 161 IREIQLHFDDCAYQ-Y-------------GSSFPLGIAVLLAA 189 (426)
Q Consensus 161 Ir~I~l~~~~~~~~-~-------------~~g~P~GIAv~~g~ 189 (426)
|.+||+....+.-. . ....|.|||.+...
T Consensus 194 I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~ 236 (262)
T 3nol_A 194 IVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEH 236 (262)
T ss_dssp EEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTT
T ss_pred EEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCC
Confidence 99999987666421 1 11357889988653
No 82
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.19 E-value=1.2e-05 Score=85.89 Aligned_cols=120 Identities=18% Similarity=0.185 Sum_probs=79.8
Q ss_pred CCceEEEEcC-CCcEEEEECCC---------------------CeEEEEeCCCCc----cc--ccEEEecCCCCcc----
Q 014345 21 IEPYSVEVLP-GGELLILDSAN---------------------SNLYRISSSLSL----YS--RPKLVAGSAEGYS---- 68 (426)
Q Consensus 21 ~~P~GIaVd~-dG~LYVaD~~n---------------------~rI~kid~dg~~----~g--~v~~vaG~~~G~~---- 68 (426)
..|.+|++++ +|.|||+-+.| +.|+++..+++- .. .+.+++|.+....
T Consensus 384 dRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~~~ 463 (592)
T 4a9v_A 384 DRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTPK 463 (592)
T ss_dssp ECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSGG
T ss_pred cCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCcccccccc
Confidence 3799999998 89999997543 679999765321 11 2334455542111
Q ss_pred cccCCcccccccCCcceEEEcCCCCEEE-EECC-----------CCEEEEEc--CCCcEEEeCCccCCCCCCCCCCcccc
Q 014345 69 GHVDGKPREARMNHPKGLTVDDRGNIYI-ADTM-----------NMAIRKIS--DSGVTTIAGGKWGRGGGHVDGPSEDA 134 (426)
Q Consensus 69 G~~dG~a~~A~Ln~P~GIaVd~dG~LYV-ADt~-----------N~rIrk~d--~g~VstIaGg~~g~~~G~~dG~~~~a 134 (426)
+...+......|+.|.+|+||++|+||| +|.. |+.+..++ .+.+..++.+.
T Consensus 464 ~g~~~~~~~~~fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P--------------- 528 (592)
T 4a9v_A 464 GGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP--------------- 528 (592)
T ss_dssp GCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECC---------------
T ss_pred cCccCccccCccCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCC---------------
Confidence 0001122345799999999999999999 7863 56888888 35576665321
Q ss_pred cCCCCCeeEEECCCCeEEEEE
Q 014345 135 KFSNDFDVVYIGSSCSLLVID 155 (426)
Q Consensus 135 ~f~~P~gIa~vd~~G~LYVaD 155 (426)
.+..|+||++.++...|||+-
T Consensus 529 ~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 529 IGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp TTCEEEEEEECTTSSEEEEEE
T ss_pred CCccccCCEECCCCCEEEEEE
Confidence 134689999765556788875
No 83
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.18 E-value=0.0001 Score=70.71 Aligned_cols=131 Identities=18% Similarity=0.133 Sum_probs=87.3
Q ss_pred ceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCCC
Q 014345 23 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 102 (426)
Q Consensus 23 P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N~ 102 (426)
..||+++ ++.||+++..+++|+++|.+.- ..+..+.-. + .+.|||.| .+.||++|. .+
T Consensus 67 geGi~~~-~~~ly~ltw~~~~v~v~D~~tl--~~~~ti~~~-----~------------~Gwglt~d-g~~L~vSdg-s~ 124 (243)
T 3mbr_X 67 GAGIVAW-RDRLIQLTWRNHEGFVYDLATL--TPRARFRYP-----G------------EGWALTSD-DSHLYMSDG-TA 124 (243)
T ss_dssp EEEEEEE-TTEEEEEESSSSEEEEEETTTT--EEEEEEECS-----S------------CCCEEEEC-SSCEEEECS-SS
T ss_pred eeEEEEe-CCEEEEEEeeCCEEEEEECCcC--cEEEEEeCC-----C------------CceEEeeC-CCEEEEECC-CC
Confidence 4677776 4689999999999999999741 122222110 1 35788876 468999995 88
Q ss_pred EEEEEcCCC---cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEee---c-
Q 014345 103 AIRKISDSG---VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQ---Y- 175 (426)
Q Consensus 103 rIrk~d~g~---VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~~~---~- 175 (426)
+|.++|..+ +.+|.-+..+. .+...+.|.++ +|.||+..+..+.|.+||+....+.-. .
T Consensus 125 ~l~~iDp~t~~~~~~I~V~~~g~------------~~~~lNeLe~~--~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~ 190 (243)
T 3mbr_X 125 VIRKLDPDTLQQVGSIKVTAGGR------------PLDNLNELEWV--NGELLANVWLTSRIARIDPASGKVVAWIDLQA 190 (243)
T ss_dssp EEEEECTTTCCEEEEEECEETTE------------ECCCEEEEEEE--TTEEEEEETTTTEEEEECTTTCBEEEEEECGG
T ss_pred eEEEEeCCCCeEEEEEEEccCCc------------ccccceeeEEe--CCEEEEEECCCCeEEEEECCCCCEEEEEECCc
Confidence 999999433 34443221111 23455677764 689999999999999999988666321 1
Q ss_pred -----------CCCCcceEEEEecC
Q 014345 176 -----------GSSFPLGIAVLLAA 189 (426)
Q Consensus 176 -----------~~g~P~GIAv~~g~ 189 (426)
....|.|||.+...
T Consensus 191 l~~~~~~~~~~~~~vlNGIA~d~~~ 215 (243)
T 3mbr_X 191 LVPDADALTDSTNDVLNGIAFDAEH 215 (243)
T ss_dssp GSTTTTSCCCTTSSCEEEEEEETTT
T ss_pred CccccccccCCcCCceEEEEEcCCC
Confidence 12357888888653
No 84
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.18 E-value=5.7e-06 Score=82.18 Aligned_cols=121 Identities=13% Similarity=0.071 Sum_probs=75.7
Q ss_pred CceEEEEcC----CCcEEEEECC-------CCeEEEEeCCCC--cccccEEEe-cCCCCcccccCCcccccccCCcceEE
Q 014345 22 EPYSVEVLP----GGELLILDSA-------NSNLYRISSSLS--LYSRPKLVA-GSAEGYSGHVDGKPREARMNHPKGLT 87 (426)
Q Consensus 22 ~P~GIaVd~----dG~LYVaD~~-------n~rI~kid~dg~--~~g~v~~va-G~~~G~~G~~dG~a~~A~Ln~P~GIa 87 (426)
.|.||++++ +|.|||++.. .++|.+++.+.. ......++. +.+.. ......|.+|+
T Consensus 67 g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~----------~~~~h~~~~l~ 136 (353)
T 2g8s_A 67 GLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKL----------STGNHFGGRLV 136 (353)
T ss_dssp SEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCC----------BSSSCCCCCEE
T ss_pred CceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCC----------CCCcccCccEE
Confidence 689999998 5889999865 468999876532 112233332 22110 01245688999
Q ss_pred EcCCCCEEEEECC-------------CCEEEEEc-CCCcEEEeCCccCCCCCCCCC---CcccccCCCCCeeEEECC-CC
Q 014345 88 VDDRGNIYIADTM-------------NMAIRKIS-DSGVTTIAGGKWGRGGGHVDG---PSEDAKFSNDFDVVYIGS-SC 149 (426)
Q Consensus 88 Vd~dG~LYVADt~-------------N~rIrk~d-~g~VstIaGg~~g~~~G~~dG---~~~~a~f~~P~gIa~vd~-~G 149 (426)
++++|.|||+... .++|.+++ ++.+. .+.. +-...+ ..-...+..|++|++ ++ +|
T Consensus 137 ~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p--~~np----f~~~~~~~~~i~a~G~rnp~gl~~-d~~~g 209 (353)
T 2g8s_A 137 FDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP--DDNP----FIKESGVRAEIWSYGIRNPQGMAM-NPWSN 209 (353)
T ss_dssp ECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC--TTCT----TTTSTTSCTTEEEECCSEEEEEEE-ETTTT
T ss_pred ECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC--CCCC----CcCCCCCCccEEEEcCcCccceEE-ECCCC
Confidence 9999999999633 35899998 55421 1110 000011 111234778999995 55 89
Q ss_pred eEEEEECCCC
Q 014345 150 SLLVIDRGNR 159 (426)
Q Consensus 150 ~LYVaDsgN~ 159 (426)
.||++|.+.+
T Consensus 210 ~l~~~d~g~~ 219 (353)
T 2g8s_A 210 ALWLNEHGPR 219 (353)
T ss_dssp EEEEEEECSB
T ss_pred CEEEEecCCC
Confidence 9999998754
No 85
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.17 E-value=8.6e-05 Score=71.25 Aligned_cols=139 Identities=14% Similarity=0.161 Sum_probs=89.1
Q ss_pred CceEEEEcCCCc-EEEEECCCCeEEEEeCCCCccc----c-cEEE-----ecCCCCcccccCCcccccccCCcceEEEcC
Q 014345 22 EPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYS----R-PKLV-----AGSAEGYSGHVDGKPREARMNHPKGLTVDD 90 (426)
Q Consensus 22 ~P~GIaVd~dG~-LYVaD~~n~rI~kid~dg~~~g----~-v~~v-----aG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~ 90 (426)
.|+++++++||. ||+++...++|..++.+... + + +... .-. ..-..|.++++++
T Consensus 156 ~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~-~~~~~~~l~~~~~~~~~~~--------------~~~~~~~~~~~sp 220 (361)
T 3scy_A 156 HLHCVRITPDGKYLLADDLGTDQIHKFNINPNA-NADNKEKFLTKGTPEAFKV--------------APGSGPRHLIFNS 220 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTC-CTTTCCCCEEEEEEEEEEC--------------CTTCCEEEEEECT
T ss_pred cceEEEECCCCCEEEEEeCCCCEEEEEEEcCCC-Ccccccceeecccccceec--------------CCCCCCeEEEEcC
Confidence 458899999997 99999988988888655321 1 1 1111 000 0123588999999
Q ss_pred CCC-EEEEECCCCEEEEEc--CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECC-CCeEEEEE
Q 014345 91 RGN-IYIADTMNMAIRKIS--DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRG-NRAIREIQ 165 (426)
Q Consensus 91 dG~-LYVADt~N~rIrk~d--~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaDsg-N~rIr~I~ 165 (426)
+|+ |||++..++.|.+++ ++.+..+..... ....+..|.+|+ ++++| .||+++.+ +++|..++
T Consensus 221 dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~-----------~~~~~~~~~~i~-~spdg~~l~v~~~~~~~~i~v~~ 288 (361)
T 3scy_A 221 DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAA-----------DTVNAQGSGDIH-LSPDGKYLYASNRLKADGVAIFK 288 (361)
T ss_dssp TSSEEEEEETTTCEEEEEEEETTEEEEEEEEES-----------CSSCCCCEEEEE-ECTTSSEEEEEECSSSCEEEEEE
T ss_pred CCCEEEEEcCCCCeEEEEEecCCceEEeEEEec-----------CCCCCCCcccEE-ECCCCCEEEEECCCCCCEEEEEE
Confidence 997 999998889999998 444433321100 011244678998 56677 58999998 88999988
Q ss_pred cCC--CceE---eecCCCCcceEEEEe
Q 014345 166 LHF--DDCA---YQYGSSFPLGIAVLL 187 (426)
Q Consensus 166 l~~--~~~~---~~~~~g~P~GIAv~~ 187 (426)
++. .... .......|.++++..
T Consensus 289 ~~~~~g~~~~~~~~~~g~~~~~~~~sp 315 (361)
T 3scy_A 289 VDETNGTLTKVGYQLTGIHPRNFIITP 315 (361)
T ss_dssp ECTTTCCEEEEEEEECSSCCCEEEECT
T ss_pred EcCCCCcEEEeeEecCCCCCceEEECC
Confidence 752 2211 122234577777763
No 86
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.16 E-value=4.4e-05 Score=74.33 Aligned_cols=131 Identities=14% Similarity=0.014 Sum_probs=88.2
Q ss_pred ceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCCC
Q 014345 23 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 102 (426)
Q Consensus 23 P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N~ 102 (426)
..||+++. +.||++...+++|+++|.+.. ..+..+.-. ..+.|||.|. +.||++| +.+
T Consensus 98 geGit~~g-~~Ly~ltw~~~~v~V~D~~Tl--~~~~ti~~~-----------------~eGwGLt~Dg-~~L~vSd-Gs~ 155 (268)
T 3nok_A 98 AEGLASDG-ERLYQLTWTEGLLFTWSGMPP--QRERTTRYS-----------------GEGWGLCYWN-GKLVRSD-GGT 155 (268)
T ss_dssp EEEEEECS-SCEEEEESSSCEEEEEETTTT--EEEEEEECS-----------------SCCCCEEEET-TEEEEEC-SSS
T ss_pred eeEEEEeC-CEEEEEEccCCEEEEEECCcC--cEEEEEeCC-----------------CceeEEecCC-CEEEEEC-CCC
Confidence 46688864 589999999999999998741 112222110 1257888773 5899999 489
Q ss_pred EEEEEcCC--C-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEee---c-
Q 014345 103 AIRKISDS--G-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQ---Y- 175 (426)
Q Consensus 103 rIrk~d~g--~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~~~---~- 175 (426)
+|+++|.. . +.+|.-+..+. .+..++.|.++ +|.||+..+..+.|.+||+....+.-. .
T Consensus 156 ~l~~iDp~T~~v~~~I~V~~~g~------------~v~~lNeLe~~--dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~ 221 (268)
T 3nok_A 156 MLTFHEPDGFALVGAVQVKLRGQ------------PVELINELECA--NGVIYANIWHSSDVLEIDPATGTVVGVIDASA 221 (268)
T ss_dssp EEEEECTTTCCEEEEEECEETTE------------ECCCEEEEEEE--TTEEEEEETTCSEEEEECTTTCBEEEEEECHH
T ss_pred EEEEEcCCCCeEEEEEEeCCCCc------------ccccccccEEe--CCEEEEEECCCCeEEEEeCCCCcEEEEEECCC
Confidence 99999933 3 33443221111 24456778865 689999999999999999987666321 1
Q ss_pred -----------CCCCcceEEEEecC
Q 014345 176 -----------GSSFPLGIAVLLAA 189 (426)
Q Consensus 176 -----------~~g~P~GIAv~~g~ 189 (426)
....+.|||.+...
T Consensus 222 L~~~~~~~~~~~~~vlNGIA~dp~~ 246 (268)
T 3nok_A 222 LTRAVAGQVTNPEAVLNGIAVEPGS 246 (268)
T ss_dssp HHHHHTTTCCCTTCCEEEEEECTTT
T ss_pred CcccccccccCcCCceEEEEEcCCC
Confidence 11367899988653
No 87
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.09 E-value=0.00049 Score=64.06 Aligned_cols=140 Identities=11% Similarity=0.051 Sum_probs=88.5
Q ss_pred CCceEEEEcCCCc-EEEEECCCCeEEEEeCCCCcccccE---EEecCCCCcccccCCcccccccCCcceEEEcCCCC-EE
Q 014345 21 IEPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPK---LVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IY 95 (426)
Q Consensus 21 ~~P~GIaVd~dG~-LYVaD~~n~rI~kid~dg~~~g~v~---~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LY 95 (426)
..|.+++++++|. ||+++...++|..++.+... +.+. .+.....+. .....|.+|+++++|+ ||
T Consensus 178 ~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~-g~~~~~~~~~~~~~~~----------~~~~~~~~i~~s~dg~~l~ 246 (343)
T 1ri6_A 178 AGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPH-GNIECVQTLDMMPENF----------SDTRWAADIHITPDGRHLY 246 (343)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEESSCTT-SCCEEEEEEECSCTTC----------CSCCCEEEEEECTTSSEEE
T ss_pred CCcceEEECCCCCEEEEEeCCCCEEEEEEecCCC-CcEEEEeeccccCccc----------cccCCccceEECCCCCEEE
Confidence 4799999999997 88999888999999885311 2222 221111111 1134678999999985 88
Q ss_pred EEECCCCEEEEEc-C--CC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECCCCeEEEEEcC--C
Q 014345 96 IADTMNMAIRKIS-D--SG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRGNRAIREIQLH--F 168 (426)
Q Consensus 96 VADt~N~rIrk~d-~--g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaDsgN~rIr~I~l~--~ 168 (426)
+++..++.|.+++ + ++ ...+..... -..|.+++ ++++| .||+++..++.|..++.+ .
T Consensus 247 v~~~~~~~i~v~d~~~~~~~~~~~~~~~~---------------~~~~~~~~-~s~dg~~l~~~~~~~~~v~v~~~d~~~ 310 (343)
T 1ri6_A 247 ACDRTASLITVFSVSEDGSVLSKEGFQPT---------------ETQPRGFN-VDHSGKYLIAAGQKSHHISVYEIVGEQ 310 (343)
T ss_dssp EEETTTTEEEEEEECTTSCCEEEEEEEEC---------------SSSCCCEE-ECTTSSEEEEECTTTCEEEEEEEETTT
T ss_pred EEecCCCEEEEEEEcCCCCceEEeeeecC---------------CCccceEE-ECCCCCEEEEecCCCCeEEEEEEcCCC
Confidence 8998889999988 4 33 332221100 01277888 46666 589999888888888554 3
Q ss_pred CceEe---ecCCCCcceEEEEe
Q 014345 169 DDCAY---QYGSSFPLGIAVLL 187 (426)
Q Consensus 169 ~~~~~---~~~~g~P~GIAv~~ 187 (426)
..... ......|.+|++..
T Consensus 311 g~~~~~~~~~~g~~p~~i~~~~ 332 (343)
T 1ri6_A 311 GLLHEKGRYAVGQGPMWVVVNA 332 (343)
T ss_dssp TEEEEEEEEECSSSCCEEEEEE
T ss_pred ceeeEccccccCCCCeeEEEEc
Confidence 22211 22224577777764
No 88
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.01 E-value=4e-05 Score=79.18 Aligned_cols=120 Identities=13% Similarity=0.146 Sum_probs=73.2
Q ss_pred CceEEEEcC----CCcEEEEECC------------CCeEEEEeCCCC--cccccEEEe-cCCCCcccccCCcccccccCC
Q 014345 22 EPYSVEVLP----GGELLILDSA------------NSNLYRISSSLS--LYSRPKLVA-GSAEGYSGHVDGKPREARMNH 82 (426)
Q Consensus 22 ~P~GIaVd~----dG~LYVaD~~------------n~rI~kid~dg~--~~g~v~~va-G~~~G~~G~~dG~a~~A~Ln~ 82 (426)
.+.|||+++ +|.|||+++. .++|.|++.+.. .....++++ +.+. .....
T Consensus 78 Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~------------~~~H~ 145 (454)
T 1cru_A 78 GLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPS------------SKDHQ 145 (454)
T ss_dssp SEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECC------------CSSCC
T ss_pred ceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCC------------CCCCC
Confidence 577999999 6889999964 468999976431 112223333 2210 11446
Q ss_pred cceEEEcCCCCEEEEECC--------------------------------CCEEEEEc-CCCcEEEeCCccCCCCCCCCC
Q 014345 83 PKGLTVDDRGNIYIADTM--------------------------------NMAIRKIS-DSGVTTIAGGKWGRGGGHVDG 129 (426)
Q Consensus 83 P~GIaVd~dG~LYVADt~--------------------------------N~rIrk~d-~g~VstIaGg~~g~~~G~~dG 129 (426)
+.+|+++++|.|||+-.. .++|.+++ +|.+- .+.. .. .+ ...
T Consensus 146 ~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip--~~Np-f~-~~-~~~ 220 (454)
T 1cru_A 146 SGRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIP--KDNP-SF-NG-VVS 220 (454)
T ss_dssp EEEEEECTTSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCC--TTCC-EE-TT-EEC
T ss_pred CCeEeECCCCeEEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCCCCCC--CCCC-CC-CC-Ccc
Confidence 899999999999999432 25677777 54420 0000 00 00 000
Q ss_pred CcccccCCCCCeeEEECCCCeEEEEECCCC
Q 014345 130 PSEDAKFSNDFDVVYIGSSCSLLVIDRGNR 159 (426)
Q Consensus 130 ~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~ 159 (426)
..-...+.+|++|+ ++++|.||++|.+.+
T Consensus 221 ei~a~G~RNp~gla-~dp~G~L~~~d~g~~ 249 (454)
T 1cru_A 221 HIYTLGHRNPQGLA-FTPNGKLLQSEQGPN 249 (454)
T ss_dssp SEEEBCCSEEEEEE-ECTTSCEEEEEECSS
T ss_pred eEEEECCCCcceEE-ECCCCCEEEEecCCC
Confidence 01122467899999 577899999998654
No 89
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.95 E-value=0.00025 Score=68.72 Aligned_cols=112 Identities=11% Similarity=0.061 Sum_probs=78.2
Q ss_pred CceEEEEcCCCcEEEEEC--CCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEEC
Q 014345 22 EPYSVEVLPGGELLILDS--ANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~--~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt 99 (426)
.|+||++++||.||++.. +.+.|.++|.... ++....--+. -..+.|++++ .+.||+++.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg---~v~~~i~l~~--------------~~fgeGi~~~-g~~lyv~t~ 83 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTG---KVENIHKMDD--------------SYFGEGLTLL-NEKLYQVVW 83 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTC---CEEEEEECCT--------------TCCEEEEEEE-TTEEEEEET
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCC---CEEEEEecCC--------------CcceEEEEEe-CCEEEEEEe
Confidence 589999999899999974 5789999999853 3322211100 1235688998 458999999
Q ss_pred CCCEEEEEcCCC---cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 014345 100 MNMAIRKISDSG---VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 171 (426)
Q Consensus 100 ~N~rIrk~d~g~---VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~ 171 (426)
.+++|.++|... +.++.-+ .+ .+++|+. +.+.|||+| +.++|.+|++.....
T Consensus 84 ~~~~v~viD~~t~~v~~~i~~g-~~----------------~g~glt~--Dg~~l~vs~-gs~~l~viD~~t~~v 138 (266)
T 2iwa_A 84 LKNIGFIYDRRTLSNIKNFTHQ-MK----------------DGWGLAT--DGKILYGSD-GTSILYEIDPHTFKL 138 (266)
T ss_dssp TCSEEEEEETTTTEEEEEEECC-SS----------------SCCEEEE--CSSSEEEEC-SSSEEEEECTTTCCE
T ss_pred cCCEEEEEECCCCcEEEEEECC-CC----------------CeEEEEE--CCCEEEEEC-CCCeEEEEECCCCcE
Confidence 999999999333 3444321 10 2456662 457899999 689999999887443
No 90
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.92 E-value=0.00064 Score=63.23 Aligned_cols=141 Identities=12% Similarity=0.084 Sum_probs=88.0
Q ss_pred CceEEEEcCCCc-EEEEECCCCeEEEEeCCCCcccccEEEec-CCCCcccccCCcccccccCCcceEEEcCCCC-EEEEE
Q 014345 22 EPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPKLVAG-SAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIAD 98 (426)
Q Consensus 22 ~P~GIaVd~dG~-LYVaD~~n~rI~kid~dg~~~g~v~~vaG-~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LYVAD 98 (426)
.|.+++++++|+ ||+++...++|..++.+.. +.+..+.. ..... . -..|.+++++++|+ ||+++
T Consensus 130 ~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~--~~~~~~~~~~~~~~----~-------~~~~~~~~~~pdg~~l~~~~ 196 (343)
T 1ri6_A 130 GCHSANISPDNRTLWVPALKQDRICLFTVSDD--GHLVAQDPAEVTTV----E-------GAGPRHMVFHPNEQYAYCVN 196 (343)
T ss_dssp TBCCCEECTTSSEEEEEEGGGTEEEEEEECTT--SCEEEEEEEEEECS----T-------TCCEEEEEECTTSSEEEEEE
T ss_pred CceEEEECCCCCEEEEecCCCCEEEEEEecCC--CceeeecccccccC----C-------CCCcceEEECCCCCEEEEEe
Confidence 699999999986 8999878889999887631 22222110 00000 0 12488999999997 89999
Q ss_pred CCCCEEEEEc-C---CCcEE---EeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECCCCeEEEEEcCC--
Q 014345 99 TMNMAIRKIS-D---SGVTT---IAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRGNRAIREIQLHF-- 168 (426)
Q Consensus 99 t~N~rIrk~d-~---g~Vst---IaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaDsgN~rIr~I~l~~-- 168 (426)
..++.|..++ + +.+.. +.....+ ......|.+++ ++++| .||+++..++.|..+++..
T Consensus 197 ~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~-----------~~~~~~~~~i~-~s~dg~~l~v~~~~~~~i~v~d~~~~~ 264 (343)
T 1ri6_A 197 ELNSSVDVWELKDPHGNIECVQTLDMMPEN-----------FSDTRWAADIH-ITPDGRHLYACDRTASLITVFSVSEDG 264 (343)
T ss_dssp TTTTEEEEEESSCTTSCCEEEEEEECSCTT-----------CCSCCCEEEEE-ECTTSSEEEEEETTTTEEEEEEECTTS
T ss_pred CCCCEEEEEEecCCCCcEEEEeeccccCcc-----------ccccCCccceE-ECCCCCEEEEEecCCCEEEEEEEcCCC
Confidence 8889999998 2 22321 2111000 01133567888 46666 7899999899999999872
Q ss_pred CceE---eecCCCCcceEEEEe
Q 014345 169 DDCA---YQYGSSFPLGIAVLL 187 (426)
Q Consensus 169 ~~~~---~~~~~g~P~GIAv~~ 187 (426)
.... .....+.|.++++..
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~s~ 286 (343)
T 1ri6_A 265 SVLSKEGFQPTETQPRGFNVDH 286 (343)
T ss_dssp CCEEEEEEEECSSSCCCEEECT
T ss_pred CceEEeeeecCCCccceEEECC
Confidence 2221 122223377777653
No 91
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.89 E-value=0.00072 Score=65.01 Aligned_cols=154 Identities=18% Similarity=0.192 Sum_probs=95.7
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEE--EecCCCCcccccCCcccccccCCcceEEEcCCC-CEEEEE
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKL--VAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG-NIYIAD 98 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~--vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG-~LYVAD 98 (426)
.+.||+++++|.++|++-.+++|+++..+.. +.+.. ....+.+.. . .=....|||+|+++ .||++.
T Consensus 71 D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~--~~i~~~~~~~~~~~~~---~------~N~g~EGLA~d~~~~~L~va~ 139 (255)
T 3qqz_A 71 DLETIEYIGDNQFVISDERDYAIYVISLTPN--SEVKILKKIKIPLQES---P------TNCGFEGLAYSRQDHTFWFFK 139 (255)
T ss_dssp SEEEEEECSTTEEEEEETTTTEEEEEEECTT--CCEEEEEEEECCCSSC---C------CSSCCEEEEEETTTTEEEEEE
T ss_pred ChHHeEEeCCCEEEEEECCCCcEEEEEcCCC--Ceeeeeeeeccccccc---c------ccCCcceEEEeCCCCEEEEEE
Confidence 7999999999999999988999998865432 22121 111110000 0 00124899999976 688876
Q ss_pred CCC-CEEEEEc---CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEee
Q 014345 99 TMN-MAIRKIS---DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAYQ 174 (426)
Q Consensus 99 t~N-~rIrk~d---~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~~~ 174 (426)
-.. ..|..++ .+...++..... ......+..+.+|++.+..+.|||....+++|.+++..+......
T Consensus 140 E~~p~~i~~~~g~~~~~~l~i~~~~~---------~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~ 210 (255)
T 3qqz_A 140 EKNPIEVYKVNGLLSSNELHISKDKA---------LQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEM 210 (255)
T ss_dssp ESSSEEEEEEESTTCSSCCEEEECHH---------HHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEE
T ss_pred CcCCceEEEEcccccCCceeeecchh---------hccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEE
Confidence 543 3777776 111112211100 000112456899998888999999999999999999988644321
Q ss_pred --c-C-------CCCcceEEEEecCCceEEEEE
Q 014345 175 --Y-G-------SSFPLGIAVLLAAGFFGYMLA 197 (426)
Q Consensus 175 --~-~-------~g~P~GIAv~~g~g~~Gy~~a 197 (426)
. + ...|-|||++..+ .-|+.+
T Consensus 211 ~L~~g~~~l~~~~~qpEGia~d~~G--~lyIvs 241 (255)
T 3qqz_A 211 SLTKGSRGLSHNIKQAEGVAMDASG--NIYIVS 241 (255)
T ss_dssp ECSTTGGGCSSCCCSEEEEEECTTC--CEEEEE
T ss_pred EcCCccCCcccccCCCCeeEECCCC--CEEEEc
Confidence 1 1 2368999999653 245543
No 92
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.82 E-value=0.0014 Score=62.93 Aligned_cols=127 Identities=20% Similarity=0.279 Sum_probs=87.1
Q ss_pred CceEEEEcCCCc-EEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCC-EEEEEC
Q 014345 22 EPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~dG~-LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LYVADt 99 (426)
.+.+++++++|. ||++....+.|..++.... +....... -..+.+++++++|+ ||++..
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~---~~~~~~~~----------------~~~~~~~~~s~dg~~l~~~~~ 135 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN---TVAGTVKT----------------GKSPLGLALSPDGKKLYVTNN 135 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTT---EEEEEEEC----------------SSSEEEEEECTTSSEEEEEET
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEECCCC---eEEEEEeC----------------CCCcceEEECCCCCEEEEEeC
Confidence 689999999987 7889888899999998752 22222211 01368999999987 779999
Q ss_pred CCCEEEEEc-C-CCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECCCCeEEEEEcCCCceEee-
Q 014345 100 MNMAIRKIS-D-SGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRGNRAIREIQLHFDDCAYQ- 174 (426)
Q Consensus 100 ~N~rIrk~d-~-g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaDsgN~rIr~I~l~~~~~~~~- 174 (426)
.++.|+.++ . +.. .++..+ ..|.++++ .+++ .||++...++.|+.+++....+...
T Consensus 136 ~~~~v~~~d~~~~~~~~~~~~~------------------~~~~~~~~-~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 196 (391)
T 1l0q_A 136 GDKTVSVINTVTKAVINTVSVG------------------RSPKGIAV-TPDGTKVYVANFDSMSISVIDTVTNSVIDTV 196 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEECC------------------SSEEEEEE-CTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEECCCCcEEEEEecC------------------CCcceEEE-CCCCCEEEEEeCCCCEEEEEECCCCeEEEEE
Confidence 899999999 3 333 333221 13567774 5555 6889998899999999887655432
Q ss_pred cCCCCcceEEEE
Q 014345 175 YGSSFPLGIAVL 186 (426)
Q Consensus 175 ~~~g~P~GIAv~ 186 (426)
.....+.++++.
T Consensus 197 ~~~~~~~~~~~~ 208 (391)
T 1l0q_A 197 KVEAAPSGIAVN 208 (391)
T ss_dssp ECSSEEEEEEEC
T ss_pred ecCCCccceEEC
Confidence 222334444443
No 93
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.78 E-value=0.00048 Score=66.25 Aligned_cols=125 Identities=9% Similarity=0.156 Sum_probs=80.9
Q ss_pred ceEEEEcCCC-cEEEEECCCC-eEEEEeCCCCccc-ccEEEecCCCCcccccCCcccccccCCcceEEEcC-CCCEEEEE
Q 014345 23 PYSVEVLPGG-ELLILDSANS-NLYRISSSLSLYS-RPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIAD 98 (426)
Q Consensus 23 P~GIaVd~dG-~LYVaD~~n~-rI~kid~dg~~~g-~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~-dG~LYVAD 98 (426)
..|||+|+++ .||++.-... .|+.++. -..+ .+... .... .. ....+..+.+|++|+ .|.+||..
T Consensus 123 ~EGLA~d~~~~~L~va~E~~p~~i~~~~g--~~~~~~l~i~-~~~~-~~-------~~~~~~d~S~l~~dp~tg~lliLS 191 (255)
T 3qqz_A 123 FEGLAYSRQDHTFWFFKEKNPIEVYKVNG--LLSSNELHIS-KDKA-LQ-------RQFTLDDVSGAEFNQQKNTLLVLS 191 (255)
T ss_dssp CEEEEEETTTTEEEEEEESSSEEEEEEES--TTCSSCCEEE-ECHH-HH-------HTCCSSCCCEEEEETTTTEEEEEE
T ss_pred cceEEEeCCCCEEEEEECcCCceEEEEcc--cccCCceeee-cchh-hc-------cccccCCceeEEEcCCCCeEEEEE
Confidence 4999999976 6888765444 7888872 1101 12221 1100 00 011255689999998 57899999
Q ss_pred CCCCEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 014345 99 TMNMAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 167 (426)
Q Consensus 99 t~N~rIrk~d-~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~ 167 (426)
..+++|..+| +|.+.....-..+. ......+..|.||+ +|++|+|||+.-. +.++++...
T Consensus 192 ~~s~~L~~~d~~g~~~~~~~L~~g~-------~~l~~~~~qpEGia-~d~~G~lyIvsE~-n~~y~f~~~ 252 (255)
T 3qqz_A 192 HESRALQEVTLVGEVIGEMSLTKGS-------RGLSHNIKQAEGVA-MDASGNIYIVSEP-NRFYRFTPQ 252 (255)
T ss_dssp TTTTEEEEECTTCCEEEEEECSTTG-------GGCSSCCCSEEEEE-ECTTCCEEEEETT-TEEEEEEC-
T ss_pred CCCCeEEEEcCCCCEEEEEEcCCcc-------CCcccccCCCCeeE-ECCCCCEEEEcCC-ceEEEEEec
Confidence 9999999999 66653332211111 01223478899999 6999999999766 599999764
No 94
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.75 E-value=0.00071 Score=70.27 Aligned_cols=160 Identities=14% Similarity=0.173 Sum_probs=98.1
Q ss_pred CCcEEEEEecCCCCCCCceEEEEcCCCc--EEEEECCCCeEEEEeCCCCcccccEEEecCCC-CcccccCCcccccccCC
Q 014345 6 SGYTVETVFDGSKLGIEPYSVEVLPGGE--LLILDSANSNLYRISSSLSLYSRPKLVAGSAE-GYSGHVDGKPREARMNH 82 (426)
Q Consensus 6 ~G~tv~tv~~g~~l~~~P~GIaVd~dG~--LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~-G~~G~~dG~a~~A~Ln~ 82 (426)
.|+.+++++++.. .|.+|++.+||. |||++. .++|++++.++... ...+++... ...|. .......
T Consensus 2 ~gf~v~~va~gL~---~P~~~a~~pdG~~rl~V~er-~G~i~~~~~~g~~~--~~~~~~~~~~~~~g~-----~~~~e~G 70 (463)
T 2wg3_C 2 NCFCIQEVVSGLR---QPVGALHSGDGSQRLFILEK-EGYVKILTPEGEIF--KEPYLDIHKLVQSGI-----KGGDERG 70 (463)
T ss_dssp CCEEEEEEEEEES---SEEEEECCSSSSCCEEEEET-TTEEEEECTTSCBC--SSCSEECTTTBCCCC-----SSSCCCS
T ss_pred CceEEEEeccCCC---CceEEEECCCCCeEEEEEeC-CceEEEEeCCCCee--eeeecCCcceeccCc-----cccCCCc
Confidence 5788898888644 899999999986 999996 68999998775321 112222210 00110 0001234
Q ss_pred cceEEEcCC----CCEEEEECCC------------CEEEEEc-C-C--------CcEEEeCCccCCCCCCCCCCcccccC
Q 014345 83 PKGLTVDDR----GNIYIADTMN------------MAIRKIS-D-S--------GVTTIAGGKWGRGGGHVDGPSEDAKF 136 (426)
Q Consensus 83 P~GIaVd~d----G~LYVADt~N------------~rIrk~d-~-g--------~VstIaGg~~g~~~G~~dG~~~~a~f 136 (426)
+.|||++++ +.|||+-+.. .+|.++. + + ...+|....... .-
T Consensus 71 llgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~------------~~ 138 (463)
T 2wg3_C 71 LLSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELH------------RK 138 (463)
T ss_dssp EEEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESS------------SS
T ss_pred ceeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCC------------Cc
Confidence 679999985 8899986521 3666665 2 1 123333211000 01
Q ss_pred CCCCeeEEECCCCeEEEE--ECC---------------CCeEEEEEcCCC---------------------ceEeecCCC
Q 014345 137 SNDFDVVYIGSSCSLLVI--DRG---------------NRAIREIQLHFD---------------------DCAYQYGSS 178 (426)
Q Consensus 137 ~~P~gIa~vd~~G~LYVa--Dsg---------------N~rIr~I~l~~~---------------------~~~~~~~~g 178 (426)
-.-..|+ ++++|.|||+ |.+ .+.|.+|++++. .-.+..+.-
T Consensus 139 H~g~~l~-fgpDG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~R 217 (463)
T 2wg3_C 139 HLGGQLL-FGPDGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLH 217 (463)
T ss_dssp SCEEEEE-ECTTSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCS
T ss_pred ccCCcEe-ECCCCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCC
Confidence 1234677 6899999998 332 367999999873 124455666
Q ss_pred CcceEEEEecC
Q 014345 179 FPLGIAVLLAA 189 (426)
Q Consensus 179 ~P~GIAv~~g~ 189 (426)
.|.|++++...
T Consensus 218 Np~gla~dp~t 228 (463)
T 2wg3_C 218 DPGRCAVDRHP 228 (463)
T ss_dssp SCCBEEEESSC
T ss_pred CcceEEECCCC
Confidence 79999999763
No 95
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.74 E-value=0.00086 Score=65.11 Aligned_cols=149 Identities=17% Similarity=0.060 Sum_probs=87.9
Q ss_pred CCceEEEEcCCCc-EEEEECCCCeEEEEeCC-CCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCC-EEEE
Q 014345 21 IEPYSVEVLPGGE-LLILDSANSNLYRISSS-LSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIA 97 (426)
Q Consensus 21 ~~P~GIaVd~dG~-LYVaD~~n~rI~kid~d-g~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LYVA 97 (426)
..|+++++++||. ||++|...++|..++.+ . +++..+.... ... .-..|.+++++++|+ ||++
T Consensus 145 ~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~---g~~~~~~~~~-~~~----------~g~~p~~~~~spdg~~l~v~ 210 (365)
T 1jof_A 145 TGIHGMVFDPTETYLYSADLTANKLWTHRKLAS---GEVELVGSVD-APD----------PGDHPRWVAMHPTGNYLYAL 210 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTT---SCEEEEEEEE-CSS----------TTCCEEEEEECTTSSEEEEE
T ss_pred CcceEEEECCCCCEEEEEcCCCCEEEEEEECCC---CCEEEeeeEe-cCC----------CCCCCCEeEECCCCCEEEEE
Confidence 4799999999997 89999888999999876 3 3333221100 000 013489999999995 8999
Q ss_pred ECCCCEEEEEc-C---CCcE----EEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECCCC-----eEEE
Q 014345 98 DTMNMAIRKIS-D---SGVT----TIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRGNR-----AIRE 163 (426)
Q Consensus 98 Dt~N~rIrk~d-~---g~Vs----tIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaDsgN~-----rIr~ 163 (426)
+..++.|..++ + +... ++.....+. .+.. +. ......|.++++++++| .||+++++.+ +|..
T Consensus 211 ~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~-~g~~-~~--~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v 286 (365)
T 1jof_A 211 MEAGNRICEYVIDPATHMPVYTHHSFPLIPPGI-PDRD-PE--TGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAG 286 (365)
T ss_dssp ETTTTEEEEEEECTTTCCEEEEEEEEESSCTTC-CCBC-TT--TSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEE
T ss_pred ECCCCeEEEEEEeCCCCcEEEccceEEcCCCCc-CCcc-cc--cccccccccEEEECCCCCEEEEECCCCCCCCCCeEEE
Confidence 98888888875 2 3332 222111100 0000 00 00122577887346666 6899998766 8999
Q ss_pred EEcC-CCceEe----ec-CCCCcceEEEEe
Q 014345 164 IQLH-FDDCAY----QY-GSSFPLGIAVLL 187 (426)
Q Consensus 164 I~l~-~~~~~~----~~-~~g~P~GIAv~~ 187 (426)
++++ ...... .. ....|.++++..
T Consensus 287 ~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp 316 (365)
T 1jof_A 287 FKLRDCGSIEKQLFLSPTPTSGGHSNAVSP 316 (365)
T ss_dssp EEECTTSCEEEEEEEEECSSCCTTCCCEEE
T ss_pred EEECCCCCEEEeeeeeecCCCCcccceecC
Confidence 9875 222321 11 223466666654
No 96
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.73 E-value=0.00046 Score=67.07 Aligned_cols=132 Identities=12% Similarity=0.034 Sum_probs=78.3
Q ss_pred CCceEEEEcCCCc-EEEEECCCCeEEEEeCCCCcccccE----EEecCCCCcccccCCcccccccCCcceEE-EcCCCC-
Q 014345 21 IEPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPK----LVAGSAEGYSGHVDGKPREARMNHPKGLT-VDDRGN- 93 (426)
Q Consensus 21 ~~P~GIaVd~dG~-LYVaD~~n~rI~kid~dg~~~g~v~----~vaG~~~G~~G~~dG~a~~A~Ln~P~GIa-Vd~dG~- 93 (426)
..|.++++++||. ||+++..++.|..++.+.. .|++. .+...+.+..|. .+... ....|.+|+ ++++|+
T Consensus 193 ~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~-~g~~~~~~~~~~~~~~~~~g~-~~~~~--~~~~~~~i~~~spdG~~ 268 (365)
T 1jof_A 193 DHPRWVAMHPTGNYLYALMEAGNRICEYVIDPA-THMPVYTHHSFPLIPPGIPDR-DPETG--KGLYRADVCALTFSGKY 268 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTT-TCCEEEEEEEEESSCTTCCCB-CTTTS--SBSEEEEEEEECTTSSE
T ss_pred CCCCEeEECCCCCEEEEEECCCCeEEEEEEeCC-CCcEEEccceEEcCCCCcCCc-ccccc--cccccccEEEECCCCCE
Confidence 4699999999996 8899887888877754311 02322 121111111111 00000 122588999 999996
Q ss_pred EEEEECCCC-----EEEEEc---CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEEC---CCCeEEEEECCCCeEE
Q 014345 94 IYIADTMNM-----AIRKIS---DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIG---SSCSLLVIDRGNRAIR 162 (426)
Q Consensus 94 LYVADt~N~-----rIrk~d---~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd---~~G~LYVaDsgN~rIr 162 (426)
||+++...+ .|.+++ ++.+..+...... .-..|.++++.+ +...||+++..++.|.
T Consensus 269 l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~-------------~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~ 335 (365)
T 1jof_A 269 MFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPT-------------PTSGGHSNAVSPCPWSDEWMAITDDQEGWLE 335 (365)
T ss_dssp EEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEEC-------------SSCCTTCCCEEECTTCTTEEEEECSSSCEEE
T ss_pred EEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeec-------------CCCCcccceecCCCcCCCEEEEEEcCCCeEE
Confidence 899987655 787776 3444432110000 011466777544 3558999998889999
Q ss_pred EEEcCCC
Q 014345 163 EIQLHFD 169 (426)
Q Consensus 163 ~I~l~~~ 169 (426)
.++.+..
T Consensus 336 v~~~~~~ 342 (365)
T 1jof_A 336 IYRWKDE 342 (365)
T ss_dssp EEEEETT
T ss_pred EEEEchh
Confidence 8887655
No 97
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.69 E-value=0.0024 Score=61.21 Aligned_cols=113 Identities=15% Similarity=0.362 Sum_probs=81.0
Q ss_pred CceEEEEcCCCc-EEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCC-EEEEEC
Q 014345 22 EPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~dG~-LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LYVADt 99 (426)
.|.+++++++|. ||++....+.|..++... ++........ ..+.+++++++|+ ||++..
T Consensus 33 ~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~---~~~~~~~~~~----------------~~v~~~~~spdg~~l~~~~~ 93 (391)
T 1l0q_A 33 NPMGAVISPDGTKVYVANAHSNDVSIIDTAT---NNVIATVPAG----------------SSPQGVAVSPDGKQVYVTNM 93 (391)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEETTT---TEEEEEEECS----------------SSEEEEEECTTSSEEEEEET
T ss_pred CcceEEECCCCCEEEEECCCCCeEEEEECCC---CeEEEEEECC----------------CCccceEECCCCCEEEEEEC
Confidence 589999999997 678888889999999864 3332222110 1478999999987 889998
Q ss_pred CCCEEEEEc-C-CCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECCCCeEEEEEcCCCceE
Q 014345 100 MNMAIRKIS-D-SGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRGNRAIREIQLHFDDCA 172 (426)
Q Consensus 100 ~N~rIrk~d-~-g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaDsgN~rIr~I~l~~~~~~ 172 (426)
.++.|++++ . +.. .++... ..+.+++ +.+++ .||++...++.|+.+++....+.
T Consensus 94 ~~~~v~v~d~~~~~~~~~~~~~------------------~~~~~~~-~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 151 (391)
T 1l0q_A 94 ASSTLSVIDTTSNTVAGTVKTG------------------KSPLGLA-LSPDGKKLYVTNNGDKTVSVINTVTKAVI 151 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEECS------------------SSEEEEE-ECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCCEEEEEECCCCeEEEEEeCC------------------CCcceEE-ECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 889999999 3 333 233221 1357787 45555 57899988999999998765543
No 98
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.54 E-value=0.00066 Score=63.46 Aligned_cols=117 Identities=9% Similarity=-0.007 Sum_probs=77.9
Q ss_pred ceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCC-EEEEECCC
Q 014345 23 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADTMN 101 (426)
Q Consensus 23 P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LYVADt~N 101 (426)
+.|+++.+++.+||+...++.|.+++..+ +++......+ . ...|.+++++++|+ +||+...+
T Consensus 2 ~~g~~~~~~~~~~v~~~~~~~v~~~d~~~---~~~~~~~~~~--------~------~~~~~~~~~s~dg~~~~v~~~~~ 64 (349)
T 1jmx_B 2 DTGPALKAGHEYMIVTNYPNNLHVVDVAS---DTVYKSCVMP--------D------KFGPGTAMMAPDNRTAYVLNNHY 64 (349)
T ss_dssp --CCCCCTTCEEEEEEETTTEEEEEETTT---TEEEEEEECS--------S------CCSSCEEEECTTSSEEEEEETTT
T ss_pred CccccccCCCEEEEEeCCCCeEEEEECCC---CcEEEEEecC--------C------CCCCceeEECCCCCEEEEEeCCC
Confidence 35778888899999999999999999874 2322221110 0 11388999999987 89999989
Q ss_pred CEEEEEc-C-CCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECC-----------CCeEEEEEc
Q 014345 102 MAIRKIS-D-SGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRG-----------NRAIREIQL 166 (426)
Q Consensus 102 ~rIrk~d-~-g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaDsg-----------N~rIr~I~l 166 (426)
+.|.+++ . +.+ .++..... . ...-..|.+++ ++++| .||+++.. ++.|.++++
T Consensus 65 ~~i~~~d~~t~~~~~~~~~~~~---~--------~~~~~~~~~~~-~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~ 132 (349)
T 1jmx_B 65 GDIYGIDLDTCKNTFHANLSSV---P--------GEVGRSMYSFA-ISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFST 132 (349)
T ss_dssp TEEEEEETTTTEEEEEEESCCS---T--------TEEEECSSCEE-ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEG
T ss_pred CcEEEEeCCCCcEEEEEEcccc---c--------ccccccccceE-ECCCCCEEEEEcccccccccccccCCCeEEEEEC
Confidence 9999999 3 333 23321100 0 00112478888 46666 68888854 579999998
Q ss_pred CC
Q 014345 167 HF 168 (426)
Q Consensus 167 ~~ 168 (426)
..
T Consensus 133 ~~ 134 (349)
T 1jmx_B 133 AD 134 (349)
T ss_dssp GG
T ss_pred CC
Confidence 75
No 99
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.53 E-value=0.0017 Score=62.25 Aligned_cols=110 Identities=13% Similarity=0.038 Sum_probs=76.1
Q ss_pred CceEEEEcCCCcEEEEECC--CCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEEC
Q 014345 22 EPYSVEVLPGGELLILDSA--NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~--n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt 99 (426)
.-.||+++. +.||++... .+.|.++|... |++.....-+... ...||+++. +.||+++.
T Consensus 22 ftqGL~~~~-~~LyestG~~g~S~v~~vD~~t---gkv~~~~~l~~~~--------------fgeGi~~~~-~~ly~ltw 82 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGETGRSSVRKVDLET---GRILQRAEVPPPY--------------FGAGIVAWR-DRLIQLTW 82 (243)
T ss_dssp CEEEEEEET-TEEEEEECCTTSCEEEEEETTT---CCEEEEEECCTTC--------------CEEEEEEET-TEEEEEES
T ss_pred ccccEEEEC-CEEEEECCCCCCceEEEEECCC---CCEEEEEeCCCCc--------------ceeEEEEeC-CEEEEEEe
Confidence 457999986 789999654 57999999985 3333322111011 236788874 68999999
Q ss_pred CCCEEEEEcCCC---cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 014345 100 MNMAIRKISDSG---VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 171 (426)
Q Consensus 100 ~N~rIrk~d~g~---VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~ 171 (426)
.++++.++|... +.++.-+. .+++|+ . +.+.||++| +.++|..+|+.....
T Consensus 83 ~~~~v~v~D~~tl~~~~ti~~~~------------------~Gwglt-~-dg~~L~vSd-gs~~l~~iDp~t~~~ 136 (243)
T 3mbr_X 83 RNHEGFVYDLATLTPRARFRYPG------------------EGWALT-S-DDSHLYMSD-GTAVIRKLDPDTLQQ 136 (243)
T ss_dssp SSSEEEEEETTTTEEEEEEECSS------------------CCCEEE-E-CSSCEEEEC-SSSEEEEECTTTCCE
T ss_pred eCCEEEEEECCcCcEEEEEeCCC------------------CceEEe-e-CCCEEEEEC-CCCeEEEEeCCCCeE
Confidence 999999999444 34443210 357887 3 457999999 589999999886443
No 100
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=97.51 E-value=0.0035 Score=57.99 Aligned_cols=115 Identities=12% Similarity=0.117 Sum_probs=75.0
Q ss_pred CceEEEEcCCCc-EEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCC-CEEEEEC
Q 014345 22 EPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG-NIYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~dG~-LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG-~LYVADt 99 (426)
.|.+++++++|. ||+++...+.|.+++..+ ++........ ..+. .-..|.+++++++| .||+++.
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~---~~~~~~~~~~--~~~~--------~~~~~~~~~~s~dg~~l~~~~~ 101 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVT---GETLGRIDLS--TPEE--------RVKSLFGAALSPDGKTLAIYES 101 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTT---CCEEEEEECC--BTTE--------EEECTTCEEECTTSSEEEEEEE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCC---CCeEeeEEcC--Cccc--------ccccccceEECCCCCEEEEEec
Confidence 489999999985 899998889999999864 2322211110 0000 01248899999998 5889862
Q ss_pred -----------CCCEEEEEc-CC-Cc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCe-EEEEECCCCeEEEE
Q 014345 100 -----------MNMAIRKIS-DS-GV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCS-LLVIDRGNRAIREI 164 (426)
Q Consensus 100 -----------~N~rIrk~d-~g-~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~-LYVaDsgN~rIr~I 164 (426)
.++.|.+++ .. .+ ..+..+ ..|.+++ ++++|. ||++ ++.|..+
T Consensus 102 ~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~------------------~~~~~~~-~s~dg~~l~~~---~~~i~~~ 159 (337)
T 1pby_B 102 PVRLELTHFEVQPTRVALYDAETLSRRKAFEAP------------------RQITMLA-WARDGSKLYGL---GRDLHVM 159 (337)
T ss_dssp EEEECSSCEEECCCEEEEEETTTTEEEEEEECC------------------SSCCCEE-ECTTSSCEEEE---SSSEEEE
T ss_pred ccccccccccccCceEEEEECCCCcEEEEEeCC------------------CCcceeE-ECCCCCEEEEe---CCeEEEE
Confidence 358899999 33 33 233211 1367787 566664 8888 4678888
Q ss_pred EcCCCce
Q 014345 165 QLHFDDC 171 (426)
Q Consensus 165 ~l~~~~~ 171 (426)
++....+
T Consensus 160 d~~~~~~ 166 (337)
T 1pby_B 160 DPEAGTL 166 (337)
T ss_dssp ETTTTEE
T ss_pred ECCCCcE
Confidence 8876544
No 101
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.50 E-value=0.0046 Score=64.63 Aligned_cols=139 Identities=6% Similarity=-0.045 Sum_probs=89.9
Q ss_pred CceEEEEcCCCc-EEEEECCCCeEEEEeC--CCCcccc-cEEEecCCCCcccccCCcccccccCCcceEEEcC----CCC
Q 014345 22 EPYSVEVLPGGE-LLILDSANSNLYRISS--SLSLYSR-PKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD----RGN 93 (426)
Q Consensus 22 ~P~GIaVd~dG~-LYVaD~~n~rI~kid~--dg~~~g~-v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~----dG~ 93 (426)
.|+++++++||. ||+++.. +.|..++. .. ++ +..+.. | ..|.+|++++ +|+
T Consensus 180 ~~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~t---~~~~~~i~~------g-----------~~p~~va~sp~~~~dg~ 238 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRD-ARIDMIDLWAKE---PTKVAEIKI------G-----------IEARSVESSKFKGYEDR 238 (543)
T ss_dssp TEEEEEECTTSCEEEEEETT-SEEEEEETTSSS---CEEEEEEEC------C-----------SEEEEEEECCSTTCTTT
T ss_pred ccceEEECCCCCEEEEECCC-CeEEEEECcCCC---CcEEEEEec------C-----------CCcceEEeCCCcCCCCC
Confidence 389999999997 8888876 89999998 32 22 222211 0 1389999999 886
Q ss_pred -EEEEECCCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccc-cCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 014345 94 -IYIADTMNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDA-KFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 168 (426)
Q Consensus 94 -LYVADt~N~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a-~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~ 168 (426)
|||++...+.|.++| ++. +.++....... ++ .+. .-..+.+|++......+||+..+.+.|..++...
T Consensus 239 ~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~-----~~--~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~ 311 (543)
T 1nir_A 239 YTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTV-----DT--QTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKD 311 (543)
T ss_dssp EEEEEEEESSEEEEEETTTCCEEEEEECCEECS-----SS--CCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTT
T ss_pred EEEEEEccCCeEEEEeccccccceeecccCccc-----Cc--cccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecC
Confidence 899998889999999 344 34444321100 00 000 0124667875444668999999999999999875
Q ss_pred Cce---EeecCCCCcceEEEEec
Q 014345 169 DDC---AYQYGSSFPLGIAVLLA 188 (426)
Q Consensus 169 ~~~---~~~~~~g~P~GIAv~~g 188 (426)
..+ ........|.+++++..
T Consensus 312 ~~~l~~~~i~~~~~~~~~~~spd 334 (543)
T 1nir_A 312 IDNLTVTSIGAAPFLHDGGWDSS 334 (543)
T ss_dssp SSSCEEEEEECCSSCCCEEECTT
T ss_pred CCcceeEEeccCcCccCceECCC
Confidence 432 12223345777777643
No 102
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.49 E-value=0.0022 Score=59.87 Aligned_cols=117 Identities=13% Similarity=0.157 Sum_probs=74.4
Q ss_pred CceEEEEcCCCc-EEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCC-EEEEEC
Q 014345 22 EPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~dG~-LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LYVADt 99 (426)
.|.+++++++|+ +|++...++.|.+++.++ ++........ ... + .+-..|.+++++++|+ ||+++.
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t---~~~~~~~~~~-~~~----~----~~~~~~~~~~~spdg~~l~~~~~ 111 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT---CKNTFHANLS-SVP----G----EVGRSMYSFAISPDGKEVYATVN 111 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTT---TEEEEEEESC-CST----T----EEEECSSCEEECTTSSEEEEEEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCC---CcEEEEEEcc-ccc----c----cccccccceEECCCCCEEEEEcc
Confidence 599999999997 899998899999999874 2322222110 000 0 0123488999999986 788874
Q ss_pred C-----------CCEEEEEc-C-CCc----EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEE
Q 014345 100 M-----------NMAIRKIS-D-SGV----TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIR 162 (426)
Q Consensus 100 ~-----------N~rIrk~d-~-g~V----stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr 162 (426)
. ++.|.+++ . +.+ .+... -..+.+++ ++++|.||+++ +.|.
T Consensus 112 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~------------------~~~~~~~~-~s~dg~l~~~~---~~i~ 169 (349)
T 1jmx_B 112 PTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM------------------PRQVYLMR-AADDGSLYVAG---PDIY 169 (349)
T ss_dssp EEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC------------------CSSCCCEE-ECTTSCEEEES---SSEE
T ss_pred cccccccccccCCCeEEEEECCCccccceeeeccC------------------CCccccee-ECCCCcEEEcc---CcEE
Confidence 3 47888888 3 222 11111 01356777 57777888864 3488
Q ss_pred EEEcCCCceE
Q 014345 163 EIQLHFDDCA 172 (426)
Q Consensus 163 ~I~l~~~~~~ 172 (426)
++++....+.
T Consensus 170 ~~d~~~~~~~ 179 (349)
T 1jmx_B 170 KMDVKTGKYT 179 (349)
T ss_dssp EECTTTCCEE
T ss_pred EEeCCCCcee
Confidence 8887665443
No 103
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.41 E-value=0.0018 Score=62.92 Aligned_cols=107 Identities=12% Similarity=0.035 Sum_probs=75.9
Q ss_pred eEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCCCE
Q 014345 24 YSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNMA 103 (426)
Q Consensus 24 ~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N~r 103 (426)
.||.++ ++.||++....++|.++|..+... +..+.+. .. ...||+++. +.||+++..+++
T Consensus 58 qGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv--~~~~l~~--~~--------------FgeGit~~g-~~Ly~ltw~~~~ 117 (268)
T 3nok_A 58 QGLVFH-QGHFFESTGHQGTLRQLSLESAQP--VWMERLG--NI--------------FAEGLASDG-ERLYQLTWTEGL 117 (268)
T ss_dssp EEEEEE-TTEEEEEETTTTEEEECCSSCSSC--SEEEECT--TC--------------CEEEEEECS-SCEEEEESSSCE
T ss_pred ceEEEE-CCEEEEEcCCCCEEEEEECCCCcE--EeEECCC--Cc--------------ceeEEEEeC-CEEEEEEccCCE
Confidence 799998 578999999999999999985331 1112211 11 136788874 589999999999
Q ss_pred EEEEcCCC---cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 014345 104 IRKISDSG---VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 171 (426)
Q Consensus 104 Irk~d~g~---VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~ 171 (426)
+.++|... +.++.-. ..+++|+. | .+.||++| +.++|+.||+.....
T Consensus 118 v~V~D~~Tl~~~~ti~~~------------------~eGwGLt~-D-g~~L~vSd-Gs~~l~~iDp~T~~v 167 (268)
T 3nok_A 118 LFTWSGMPPQRERTTRYS------------------GEGWGLCY-W-NGKLVRSD-GGTMLTFHEPDGFAL 167 (268)
T ss_dssp EEEEETTTTEEEEEEECS------------------SCCCCEEE-E-TTEEEEEC-SSSEEEEECTTTCCE
T ss_pred EEEEECCcCcEEEEEeCC------------------CceeEEec-C-CCEEEEEC-CCCEEEEEcCCCCeE
Confidence 99999443 3444321 13577773 3 57999999 689999999886443
No 104
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.39 E-value=0.0024 Score=61.86 Aligned_cols=123 Identities=16% Similarity=0.145 Sum_probs=79.4
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEE-ecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLV-AGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 100 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~v-aG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~ 100 (426)
.+.|++.| .+.||++| +.++|..+|+.+.. ....+ ++. +|. .+..++.+... +|.||++...
T Consensus 128 eG~glt~d-g~~L~~Sd-Gs~~i~~iDp~T~~--v~~~I~V~~--------~g~----~~~~lNELe~~-~G~lyan~w~ 190 (262)
T 3nol_A 128 EGWGLTHN-DQYLIMSD-GTPVLRFLDPESLT--PVRTITVTA--------HGE----ELPELNELEWV-DGEIFANVWQ 190 (262)
T ss_dssp CCCCEEEC-SSCEEECC-SSSEEEEECTTTCS--EEEEEECEE--------TTE----ECCCEEEEEEE-TTEEEEEETT
T ss_pred CceEEecC-CCEEEEEC-CCCeEEEEcCCCCe--EEEEEEecc--------CCc----cccccceeEEE-CCEEEEEEcc
Confidence 45666655 35699999 47899999998522 12221 111 111 25567777776 7899999999
Q ss_pred CCEEEEEc--CCCcE-EEeCC-ccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 014345 101 NMAIRKIS--DSGVT-TIAGG-KWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 167 (426)
Q Consensus 101 N~rIrk~d--~g~Vs-tIaGg-~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~ 167 (426)
.+.|.+|| +|.|. +|.-. .... .. . .......|+|||+.+..+.|||+.-.=..+.+|.+.
T Consensus 191 ~~~I~vIDp~tG~V~~~Id~~~L~~~-~~----~-~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~~ 255 (262)
T 3nol_A 191 TNKIVRIDPETGKVTGIIDLNGILAE-AG----P-LPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITLT 255 (262)
T ss_dssp SSEEEEECTTTCBEEEEEECTTGGGG-SC----S-CCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred CCeEEEEECCCCcEEEEEECCcCccc-cc----c-ccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEEe
Confidence 99999999 55654 44321 1100 00 0 112345799999877788999999877788887753
No 105
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.35 E-value=0.0069 Score=58.84 Aligned_cols=128 Identities=17% Similarity=0.121 Sum_probs=83.8
Q ss_pred CceEEEEcCCCc-EEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCC-EEEEEC
Q 014345 22 EPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~dG~-LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LYVADt 99 (426)
.|.+++++++|. ||++....+.|..++... ++....... -..|.+++++++|+ |+++..
T Consensus 213 ~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~---~~~~~~~~~----------------~~~~~~~~~~~~g~~l~~~~~ 273 (433)
T 3bws_A 213 WSKILLYDPIRDLVYCSNWISEDISVIDRKT---KLEIRKTDK----------------IGLPRGLLLSKDGKELYIAQF 273 (433)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTT---TEEEEECCC----------------CSEEEEEEECTTSSEEEEEEE
T ss_pred CeeEEEEcCCCCEEEEEecCCCcEEEEECCC---CcEEEEecC----------------CCCceEEEEcCCCCEEEEEEC
Confidence 689999999887 678888889999999864 222222111 11278999999985 677764
Q ss_pred -------CCCEEEEEc-C-CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECCCCeEEEEEcCCC
Q 014345 100 -------MNMAIRKIS-D-SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRGNRAIREIQLHFD 169 (426)
Q Consensus 100 -------~N~rIrk~d-~-g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaDsgN~rIr~I~l~~~ 169 (426)
.++.|+.++ . +.+...... -..|.++++ ++++ .||++...+++|+.+++...
T Consensus 274 ~~~~~~~~dg~i~~~d~~~~~~~~~~~~-----------------~~~~~~~~~-~~~g~~l~~~~~~~~~v~v~d~~~~ 335 (433)
T 3bws_A 274 SASNQESGGGRLGIYSMDKEKLIDTIGP-----------------PGNKRHIVS-GNTENKIYVSDMCCSKIEVYDLKEK 335 (433)
T ss_dssp ESCTTCSCCEEEEEEETTTTEEEEEEEE-----------------EECEEEEEE-CSSTTEEEEEETTTTEEEEEETTTT
T ss_pred CCCccccCCCeEEEEECCCCcEEeeccC-----------------CCCcceEEE-CCCCCEEEEEecCCCEEEEEECCCC
Confidence 356888998 3 333222211 013567774 6666 79999999999999999865
Q ss_pred ceEee-cCCCCcceEEEE
Q 014345 170 DCAYQ-YGSSFPLGIAVL 186 (426)
Q Consensus 170 ~~~~~-~~~g~P~GIAv~ 186 (426)
.+... .....+.++++.
T Consensus 336 ~~~~~~~~~~~~~~~~~s 353 (433)
T 3bws_A 336 KVQKSIPVFDKPNTIALS 353 (433)
T ss_dssp EEEEEEECSSSEEEEEEC
T ss_pred cEEEEecCCCCCCeEEEc
Confidence 54332 222334555544
No 106
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.35 E-value=0.0065 Score=60.49 Aligned_cols=115 Identities=7% Similarity=-0.074 Sum_probs=69.2
Q ss_pred CCceEEEEcCCCc-EEEEEC---------CCCeEEEEeCCCCcccccEEE-ecCCCCcccccCCcccccccCCcceEEEc
Q 014345 21 IEPYSVEVLPGGE-LLILDS---------ANSNLYRISSSLSLYSRPKLV-AGSAEGYSGHVDGKPREARMNHPKGLTVD 89 (426)
Q Consensus 21 ~~P~GIaVd~dG~-LYVaD~---------~n~rI~kid~dg~~~g~v~~v-aG~~~G~~G~~dG~a~~A~Ln~P~GIaVd 89 (426)
..| +|++++||. |||++. ..+.|.+||..... .+..+ .+.. . . ...-..|.+++++
T Consensus 67 ~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~--~~~~i~~~~~-~-------~--~~~g~~p~~~~~s 133 (373)
T 2mad_H 67 FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL--PIADIELPDA-P-------R--FDVGPYSWMNANT 133 (373)
T ss_pred CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc--EEEEEECCCc-c-------c--cccCCCccceEEC
Confidence 368 999999986 999985 24678899886311 11111 1100 0 0 0002469999999
Q ss_pred CCCC-EEEEECC-CCEEEEEcCCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEc
Q 014345 90 DRGN-IYIADTM-NMAIRKISDSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQL 166 (426)
Q Consensus 90 ~dG~-LYVADt~-N~rIrk~d~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l 166 (426)
+||+ |||+... .+.|.+|| .+-..+.- .+..|.++.+.+....+|++.+..+++..|+.
T Consensus 134 pDG~~l~v~n~~~~~~v~viD-~t~~~~~~-----------------~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~ 194 (373)
T 2mad_H 134 PNNADLLFFQFAAGPAVGLVV-QGGSSDDQ-----------------LLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDH 194 (373)
T ss_pred CCCCEEEEEecCCCCeEEEEE-CCCCEEeE-----------------EcCCCceEEEEeCCCceEEEEcCCCCEEEEEC
Confidence 9986 9999865 68899998 44222110 00112223333444567777777777777777
No 107
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.30 E-value=0.002 Score=69.04 Aligned_cols=120 Identities=18% Similarity=0.201 Sum_probs=75.1
Q ss_pred CCCceEEEEcC-CCcEEEEECCC---------------------CeEEEEeCCCCc------ccccEEEecCCCCccc--
Q 014345 20 GIEPYSVEVLP-GGELLILDSAN---------------------SNLYRISSSLSL------YSRPKLVAGSAEGYSG-- 69 (426)
Q Consensus 20 ~~~P~GIaVd~-dG~LYVaD~~n---------------------~rI~kid~dg~~------~g~v~~vaG~~~G~~G-- 69 (426)
...|.+|++++ +|.|||+-+.+ +.|+++..++.. .-.+.+++|.+....+
T Consensus 383 f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~~ 462 (592)
T 3zwu_A 383 MDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTP 462 (592)
T ss_dssp EECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSG
T ss_pred EeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccccc
Confidence 34899999997 89999997643 579999765321 1123344454321111
Q ss_pred --ccCCcccccccCCcceEEEcCCCCEEEEEC------------CCCEEEEEc--CCCcEEEeCCccCCCCCCCCCCccc
Q 014345 70 --HVDGKPREARMNHPKGLTVDDRGNIYIADT------------MNMAIRKIS--DSGVTTIAGGKWGRGGGHVDGPSED 133 (426)
Q Consensus 70 --~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt------------~N~rIrk~d--~g~VstIaGg~~g~~~G~~dG~~~~ 133 (426)
..........|+.|.+|+||+.|+|||+.- +|+.++..+ .+.+..++-+..+
T Consensus 463 ~~~~~~~~~~~~f~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~g------------ 530 (592)
T 3zwu_A 463 KGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG------------ 530 (592)
T ss_dssp GGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTT------------
T ss_pred cccccccCCCCCccCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCC------------
Confidence 001112234699999999999999999853 357788887 4567766654322
Q ss_pred ccCCCCCeeEEECCCCeEEEE
Q 014345 134 AKFSNDFDVVYIGSSCSLLVI 154 (426)
Q Consensus 134 a~f~~P~gIa~vd~~G~LYVa 154 (426)
+...|+++.++...|||+
T Consensus 531 ---aE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 531 ---CEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp ---CEEEEEEECTTSSEEEEE
T ss_pred ---ccCcCeeECCCCCEEEEE
Confidence 145788864444467765
No 108
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.27 E-value=0.0063 Score=59.15 Aligned_cols=109 Identities=11% Similarity=0.089 Sum_probs=77.1
Q ss_pred CceEEEEcCCCc-EEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCC-EEEEEC
Q 014345 22 EPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~dG~-LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LYVADt 99 (426)
.|.+++++++|+ ||++....++|..++.++ ++....... ...|.+++++++|. ||++..
T Consensus 304 ~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~---~~~~~~~~~----------------~~~~~~~~~s~dg~~l~~~~~ 364 (433)
T 3bws_A 304 NKRHIVSGNTENKIYVSDMCCSKIEVYDLKE---KKVQKSIPV----------------FDKPNTIALSPDGKYLYVSCR 364 (433)
T ss_dssp CEEEEEECSSTTEEEEEETTTTEEEEEETTT---TEEEEEEEC----------------SSSEEEEEECTTSSEEEEEEC
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEECCC---CcEEEEecC----------------CCCCCeEEEcCCCCEEEEEec
Confidence 688999999985 899988999999999874 232222211 12378999999987 888887
Q ss_pred CC--------------CEEEEEc--CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECCCCeE
Q 014345 100 MN--------------MAIRKIS--DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRGNRAI 161 (426)
Q Consensus 100 ~N--------------~rIrk~d--~g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaDsgN~rI 161 (426)
.+ +.|+.++ ++.+ .++.++ ..|.++++ +++| .|++++..++.|
T Consensus 365 ~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~------------------~~~~~~~~-s~dg~~l~~~~~~d~~i 425 (433)
T 3bws_A 365 GPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG------------------NQPTGLDV-SPDNRYLVISDFLDHQI 425 (433)
T ss_dssp CCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS------------------SSEEEEEE-CTTSCEEEEEETTTTEE
T ss_pred CCCccccccccccccceEEEEEECCCCcEEEEecCC------------------CCCceEEE-cCCCCEEEEEECCCCeE
Confidence 64 3899999 3333 333221 14678884 5565 677888878999
Q ss_pred EEEEcCC
Q 014345 162 REIQLHF 168 (426)
Q Consensus 162 r~I~l~~ 168 (426)
+.+++++
T Consensus 426 ~v~~~~~ 432 (433)
T 3bws_A 426 RVYRRDG 432 (433)
T ss_dssp EEEEETT
T ss_pred EEEEecC
Confidence 9998753
No 109
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.23 E-value=0.0033 Score=64.61 Aligned_cols=75 Identities=7% Similarity=-0.093 Sum_probs=52.7
Q ss_pred CCceEEEEcCCCc-EEEEEC---------CCCeEEEEeCCCCcccccEEE-ecCCCCcccccCCcccccccCCcceEEEc
Q 014345 21 IEPYSVEVLPGGE-LLILDS---------ANSNLYRISSSLSLYSRPKLV-AGSAEGYSGHVDGKPREARMNHPKGLTVD 89 (426)
Q Consensus 21 ~~P~GIaVd~dG~-LYVaD~---------~n~rI~kid~dg~~~g~v~~v-aG~~~G~~G~~dG~a~~A~Ln~P~GIaVd 89 (426)
..| +|++++||. |||++. ..+.|.+||..... .+..+ .+.. .. ......|.+++++
T Consensus 119 ~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~--vv~~I~v~g~-~r---------~~~g~~P~~~~~s 185 (426)
T 3c75_H 119 FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL--PIADIELPDA-PR---------FLVGTYQWMNALT 185 (426)
T ss_dssp SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC--EEEEEEETTC-CC---------CCBSCCGGGSEEC
T ss_pred CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc--EEEEEECCCc-cc---------cccCCCcceEEEc
Confidence 469 999999987 999986 35679999987532 12222 2210 00 0012469999999
Q ss_pred CCCC-EEEEECC-CCEEEEEc
Q 014345 90 DRGN-IYIADTM-NMAIRKIS 108 (426)
Q Consensus 90 ~dG~-LYVADt~-N~rIrk~d 108 (426)
+||+ |||++.. .+.|.+||
T Consensus 186 pDGk~lyV~n~~~~~~VsVID 206 (426)
T 3c75_H 186 PDNKNLLFYQFSPAPAVGVVD 206 (426)
T ss_dssp TTSSEEEEEECSSSCEEEEEE
T ss_pred CCCCEEEEEecCCCCeEEEEE
Confidence 9985 9999975 78999999
No 110
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.22 E-value=0.0031 Score=64.81 Aligned_cols=110 Identities=14% Similarity=0.070 Sum_probs=72.7
Q ss_pred CC-cEEEEECCC----CeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCC-EEEEEC-----
Q 014345 31 GG-ELLILDSAN----SNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADT----- 99 (426)
Q Consensus 31 dG-~LYVaD~~n----~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LYVADt----- 99 (426)
++ .+||++... +.|.+||..... .+..+. . | ..| ||++++||+ |||+++
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~--vv~~I~-v-----G-----------~~P-gia~SpDgk~lyVan~~~~~~ 142 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGR--ILGMTD-G-----G-----------FLP-HPVAAEDGSFFAQASTVFERI 142 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTE--EEEEEE-E-----C-----------SSC-EEEECTTSSCEEEEEEEEEET
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCE--EEEEEE-C-----C-----------CCC-ceEECCCCCEEEEEecccccc
Confidence 55 499999854 799999987421 111121 0 1 148 999999986 999996
Q ss_pred ----CCCEEEEEc--CCC-cEEEe-CCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECC-CCeEEEEEcCCC
Q 014345 100 ----MNMAIRKIS--DSG-VTTIA-GGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRG-NRAIREIQLHFD 169 (426)
Q Consensus 100 ----~N~rIrk~d--~g~-VstIa-Gg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaDsg-N~rIr~I~l~~~ 169 (426)
..+.|.+|| .+. +.+|. ++.... .....|.++++ +++| .|||++.. .+.|.+||+...
T Consensus 143 ~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~-----------~~g~~P~~~~~-spDGk~lyV~n~~~~~~VsVID~~t~ 210 (426)
T 3c75_H 143 ARGKRTDYVEVFDPVTFLPIADIELPDAPRF-----------LVGTYQWMNAL-TPDNKNLLFYQFSPAPAVGVVDLEGK 210 (426)
T ss_dssp TEEEEEEEEEEECTTTCCEEEEEEETTCCCC-----------CBSCCGGGSEE-CTTSSEEEEEECSSSCEEEEEETTTT
T ss_pred ccCCCCCEEEEEECCCCcEEEEEECCCcccc-----------ccCCCcceEEE-cCCCCEEEEEecCCCCeEEEEECCCC
Confidence 356799999 344 34443 211000 01236899994 6555 89999975 789999999876
Q ss_pred ceE
Q 014345 170 DCA 172 (426)
Q Consensus 170 ~~~ 172 (426)
...
T Consensus 211 kvv 213 (426)
T 3c75_H 211 TFD 213 (426)
T ss_dssp EEE
T ss_pred eEE
Confidence 543
No 111
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.22 E-value=0.0031 Score=64.20 Aligned_cols=113 Identities=16% Similarity=0.107 Sum_probs=73.4
Q ss_pred cCCCc-EEEEECC----CCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCC-EEEEECC--
Q 014345 29 LPGGE-LLILDSA----NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADTM-- 100 (426)
Q Consensus 29 d~dG~-LYVaD~~----n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LYVADt~-- 100 (426)
.|+|+ |||+|.. .++|.+||..... .+..+. . | ..|. |++++||+ +||+++.
T Consensus 41 ~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~--v~~~I~-v-----G-----------~~P~-va~spDG~~lyVan~~~~ 100 (386)
T 3sjl_D 41 APDARRVYVNDPAHFAAVTQQFVIDGEAGR--VIGMID-G-----G-----------FLPN-PVVADDGSFIAHASTVFS 100 (386)
T ss_dssp CCCTTEEEEEECGGGCSSEEEEEEETTTTE--EEEEEE-E-----C-----------SSCE-EEECTTSSCEEEEEEEEE
T ss_pred CCCCCEEEEEcCcccCCCCEEEEEECCCCe--EEEEEE-C-----C-----------CCCc-EEECCCCCEEEEEccccc
Confidence 46765 9999986 6799999987421 112221 0 1 1275 99999986 9999852
Q ss_pred -------CCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECC-CCeEEEEEcCC
Q 014345 101 -------NMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRG-NRAIREIQLHF 168 (426)
Q Consensus 101 -------N~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaDsg-N~rIr~I~l~~ 168 (426)
.+.|.+|| .+. +.+|.-+...+ ...-..|+++++ +++| .|||++.. .+.|.+|++..
T Consensus 101 r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r----------~~~g~~P~~~a~-spDGk~lyVan~~~~~~VsVID~~t 169 (386)
T 3sjl_D 101 RIARGERTDYVEVFDPVTLLPTADIELPDAPR----------FLVGTYPWMTSL-TPDGKTLLFYQFSPAPAVGVVDLEG 169 (386)
T ss_dssp ETTEEEEEEEEEEECTTTCCEEEEEEETTCCC----------CCBSCCGGGEEE-CTTSSEEEEEECSSSCEEEEEETTT
T ss_pred ccccCCCCCEEEEEECCCCeEEEEEECCCccc----------cccCCCCceEEE-cCCCCEEEEEEcCCCCeEEEEECCC
Confidence 46699999 344 34442110000 001237999995 5555 79999974 78999999987
Q ss_pred CceE
Q 014345 169 DDCA 172 (426)
Q Consensus 169 ~~~~ 172 (426)
....
T Consensus 170 ~~vv 173 (386)
T 3sjl_D 170 KAFK 173 (386)
T ss_dssp TEEE
T ss_pred CcEE
Confidence 6553
No 112
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.15 E-value=0.0093 Score=63.17 Aligned_cols=132 Identities=8% Similarity=-0.009 Sum_probs=81.9
Q ss_pred CCCceEEEEcCCCc-EEEEECCCCeEEEEeCC-CCcccccEEE-ecCCCCcccccCCcccccccCCcceEEEc----CCC
Q 014345 20 GIEPYSVEVLPGGE-LLILDSANSNLYRISSS-LSLYSRPKLV-AGSAEGYSGHVDGKPREARMNHPKGLTVD----DRG 92 (426)
Q Consensus 20 ~~~P~GIaVd~dG~-LYVaD~~n~rI~kid~d-g~~~g~v~~v-aG~~~G~~G~~dG~a~~A~Ln~P~GIaVd----~dG 92 (426)
+..|+++++++||. |||++ ..+.|.+||.. .+. ..+..+ .|. .|.+|+++ ++|
T Consensus 196 g~~p~~v~~SpDGr~lyv~~-~dg~V~viD~~~~t~-~~v~~i~~G~------------------~P~~ia~s~~~~pDG 255 (567)
T 1qks_A 196 GYAVHISRLSASGRYLFVIG-RDGKVNMIDLWMKEP-TTVAEIKIGS------------------EARSIETSKMEGWED 255 (567)
T ss_dssp SSCEEEEEECTTSCEEEEEE-TTSEEEEEETTSSSC-CEEEEEECCS------------------EEEEEEECCSTTCTT
T ss_pred CCCccceEECCCCCEEEEEc-CCCeEEEEECCCCCC-cEeEEEecCC------------------CCceeEEccccCCCC
Confidence 34699999999997 78887 46799999984 111 112222 111 38999999 588
Q ss_pred C-EEEEECCCCEEEEEcC--CC-cEEEeCCccCCCC-----C---------CC----------CCCcccc----------
Q 014345 93 N-IYIADTMNMAIRKISD--SG-VTTIAGGKWGRGG-----G---------HV----------DGPSEDA---------- 134 (426)
Q Consensus 93 ~-LYVADt~N~rIrk~d~--g~-VstIaGg~~g~~~-----G---------~~----------dG~~~~a---------- 134 (426)
+ +||++...+.|.++|. .. +.++.-+...... . .. .|.....
T Consensus 256 k~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v 335 (567)
T 1qks_A 256 KYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKT 335 (567)
T ss_dssp TEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEE
T ss_pred CEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCcccee
Confidence 5 9999999999999993 33 3344321110000 0 00 0000000
Q ss_pred ----cCCCCCeeEEECCCC-eEEEEECCCCeEEEEEcCCCceE
Q 014345 135 ----KFSNDFDVVYIGSSC-SLLVIDRGNRAIREIQLHFDDCA 172 (426)
Q Consensus 135 ----~f~~P~gIa~vd~~G-~LYVaDsgN~rIr~I~l~~~~~~ 172 (426)
.=..|+++. ++++| .+||++...+.|.+|+.......
T Consensus 336 ~~i~~~~~~~d~~-~~pdgr~~~va~~~sn~V~ViD~~t~kl~ 377 (567)
T 1qks_A 336 TEISAERFLHDGG-LDGSHRYFITAANARNKLVVIDTKEGKLV 377 (567)
T ss_dssp EEEECCSSEEEEE-ECTTSCEEEEEEGGGTEEEEEETTTTEEE
T ss_pred eeeeccccccCce-ECCCCCEEEEEeCCCCeEEEEECCCCcEE
Confidence 012466777 46666 58899999999999999876543
No 113
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.13 E-value=0.018 Score=57.25 Aligned_cols=47 Identities=13% Similarity=0.089 Sum_probs=33.7
Q ss_pred CCCeeEEECCCCe--EEEEECCCCeEEEEEcCCCceEee-c-CCCCcceEEE
Q 014345 138 NDFDVVYIGSSCS--LLVIDRGNRAIREIQLHFDDCAYQ-Y-GSSFPLGIAV 185 (426)
Q Consensus 138 ~P~gIa~vd~~G~--LYVaDsgN~rIr~I~l~~~~~~~~-~-~~g~P~GIAv 185 (426)
.|++|+ ++++|. ||++..+.+.|.+|+......... . -...|.+|.+
T Consensus 319 ~p~~i~-~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i~~vG~~P~~~~~ 369 (373)
T 2mad_H 319 DVDAIS-VAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLSV 369 (373)
T ss_pred CcCeEE-ECCCCCeEEEEEcCCCCeEEEEECCCCCEEeeecCCCCCCcEEEE
Confidence 589999 567765 788887889999999987665433 2 2335776665
No 114
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.05 E-value=0.013 Score=57.46 Aligned_cols=46 Identities=9% Similarity=0.081 Sum_probs=32.4
Q ss_pred CCeeEEECCCCeEEEEECCCCeEEEEEcCCC--ceEee-cC-CCCcceEEEE
Q 014345 139 DFDVVYIGSSCSLLVIDRGNRAIREIQLHFD--DCAYQ-YG-SSFPLGIAVL 186 (426)
Q Consensus 139 P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~--~~~~~-~~-~g~P~GIAv~ 186 (426)
|++|++..+...||+++. +.|.+|+.... .+... .. ...|.+|++.
T Consensus 307 p~~ia~spdg~~l~v~n~--~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~ 356 (361)
T 2oiz_A 307 ALSMTIDQQRNLMLTLDG--GNVNVYDISQPEPKLLRTIEGAAEASLQVQFH 356 (361)
T ss_dssp CCEEEEETTTTEEEEECS--SCEEEEECSSSSCEEEEEETTSCSSEEEEEEC
T ss_pred eeEEEECCCCCEEEEeCC--CeEEEEECCCCcceeeEEeccCCCCcEEEEec
Confidence 899996544447888885 89999998876 55433 23 3458888775
No 115
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.04 E-value=0.011 Score=61.79 Aligned_cols=127 Identities=12% Similarity=0.040 Sum_probs=84.3
Q ss_pred CCceEEEEcC----CCc-EEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCC-CE
Q 014345 21 IEPYSVEVLP----GGE-LLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG-NI 94 (426)
Q Consensus 21 ~~P~GIaVd~----dG~-LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG-~L 94 (426)
..|++|++++ ||. |||+....+.|..+|..... .+.++... +..+ ++... ..-..+.+|++++++ .+
T Consensus 222 ~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~--~~~~i~~~--g~~~--~~~~~-~~~~~v~~i~~s~~~~~~ 294 (543)
T 1nir_A 222 IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE--PKQIVSTR--GMTV--DTQTY-HPEPRVAAIIASHEHPEF 294 (543)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC--EEEEEECC--EECS--SSCCE-ESCCCEEEEEECSSSSEE
T ss_pred CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc--cceeeccc--Cccc--Ccccc-ccCCceEEEEECCCCCEE
Confidence 4699999999 987 88988878899999876421 22333221 1100 11000 001246789999865 58
Q ss_pred EEEECCCCEEEEEc--CCC-c--EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCe-EEEEECCCCeEEEEEcCC
Q 014345 95 YIADTMNMAIRKIS--DSG-V--TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCS-LLVIDRGNRAIREIQLHF 168 (426)
Q Consensus 95 YVADt~N~rIrk~d--~g~-V--stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~-LYVaDsgN~rIr~I~l~~ 168 (426)
||+....+.|+.++ +.. + .++.. + ..|++++ ++++|. ||++....+.|.+++...
T Consensus 295 ~vs~~~~g~i~vvd~~~~~~l~~~~i~~---~---------------~~~~~~~-~spdg~~l~va~~~~~~v~v~D~~t 355 (543)
T 1nir_A 295 IVNVKETGKVLLVNYKDIDNLTVTSIGA---A---------------PFLHDGG-WDSSHRYFMTAANNSNKVAVIDSKD 355 (543)
T ss_dssp EEEETTTTEEEEEECTTSSSCEEEEEEC---C---------------SSCCCEE-ECTTSCEEEEEEGGGTEEEEEETTT
T ss_pred EEEECCCCeEEEEEecCCCcceeEEecc---C---------------cCccCce-ECCCCCEEEEEecCCCeEEEEECCC
Confidence 88888899999999 322 2 23321 0 2588888 577775 889998889999999987
Q ss_pred CceEe
Q 014345 169 DDCAY 173 (426)
Q Consensus 169 ~~~~~ 173 (426)
..+..
T Consensus 356 g~l~~ 360 (543)
T 1nir_A 356 RRLSA 360 (543)
T ss_dssp TEEEE
T ss_pred CeEEE
Confidence 76653
No 116
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.86 E-value=0.00061 Score=73.04 Aligned_cols=114 Identities=14% Similarity=0.190 Sum_probs=74.8
Q ss_pred CCceEEEEcCCCc-EEEEECCCCeEEEEeCCCCc---ccc----cEEEecCCCCcccccCCcccccccCCcceEEEcCCC
Q 014345 21 IEPYSVEVLPGGE-LLILDSANSNLYRISSSLSL---YSR----PKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG 92 (426)
Q Consensus 21 ~~P~GIaVd~dG~-LYVaD~~n~rI~kid~dg~~---~g~----v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG 92 (426)
..|+|+.++|||. +||++...++|.+|+.+... .++ -..++ .. .-| ..|.+++++++|
T Consensus 277 ~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~-~v--~vG-----------~gP~h~aF~~dG 342 (595)
T 1fwx_A 277 NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVA-EP--ELG-----------LGPLHTAFDGRG 342 (595)
T ss_dssp SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEE-CC--BCC-----------SCEEEEEECTTS
T ss_pred CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEE-Ec--CCC-----------CCcceEEECCCC
Confidence 3799999999998 99999999999999887210 000 00111 10 001 249999999999
Q ss_pred CEEEEECCCCEEEEEc-CC-----------C-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECCC
Q 014345 93 NIYIADTMNMAIRKIS-DS-----------G-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRGN 158 (426)
Q Consensus 93 ~LYVADt~N~rIrk~d-~g-----------~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaDsgN 158 (426)
++|++-...+.|.+++ +. . +.++.-+ +..| ......+++ ..++| .||+++.+.
T Consensus 343 ~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~-------yqpG-----h~~~~~g~t-~~~DGk~l~~~Nk~s 409 (595)
T 1fwx_A 343 NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVH-------YQPG-----HLKTVMGET-LDATNDWLVCLSKFS 409 (595)
T ss_dssp EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECS-------SCEE-----EEEETTTTS-TTCCSSEEEEEESCC
T ss_pred eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecc-------cccc-----cceeccceE-eCCCCCEEEEcCCCC
Confidence 9999999999999999 32 1 2333221 1111 122334555 45556 799999877
Q ss_pred -CeE
Q 014345 159 -RAI 161 (426)
Q Consensus 159 -~rI 161 (426)
.|+
T Consensus 410 kdr~ 413 (595)
T 1fwx_A 410 KDRF 413 (595)
T ss_dssp TTSS
T ss_pred cccc
Confidence 776
No 117
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.81 E-value=0.0056 Score=61.57 Aligned_cols=114 Identities=6% Similarity=-0.104 Sum_probs=71.6
Q ss_pred CCceEEEEcCCCc-EEEEEC---------CCCeEEEEeCCCCcccccEEE-ecCCCCcccccCCcccccccCCcceEEEc
Q 014345 21 IEPYSVEVLPGGE-LLILDS---------ANSNLYRISSSLSLYSRPKLV-AGSAEGYSGHVDGKPREARMNHPKGLTVD 89 (426)
Q Consensus 21 ~~P~GIaVd~dG~-LYVaD~---------~n~rI~kid~dg~~~g~v~~v-aG~~~G~~G~~dG~a~~A~Ln~P~GIaVd 89 (426)
..| ++++++||. |||++. ..+.|.+||..... .+..+ +|.... ......|.+|+++
T Consensus 66 ~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~--vv~~I~v~~~~~----------~~~g~~P~~ia~S 132 (368)
T 1mda_H 66 FLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL--PIADIELPDAPR----------FSVGPRVHIIGNC 132 (368)
T ss_dssp TTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC--EEEEEEETTSCS----------CCBSCCTTSEEEC
T ss_pred CCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC--EEEEEECCCccc----------cccCCCcceEEEc
Confidence 359 999999985 999984 35789999998532 22332 221100 0012469999999
Q ss_pred CCC-CEEEEECC-CCEEEE--EcCCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEE
Q 014345 90 DRG-NIYIADTM-NMAIRK--ISDSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQ 165 (426)
Q Consensus 90 ~dG-~LYVADt~-N~rIrk--~d~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~ 165 (426)
+|| .+||++.. .+.|.+ +|...+.++.-+ + + ..+ ......+|++.+.++++..++
T Consensus 133 pDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~------~---------~----~~~--~p~g~~~~~~~~~dg~~~~vd 191 (368)
T 1mda_H 133 ASSACLLFFLFGSSAAAGLSVPGASDDQLTKSA------S---------C----FHI--HPGAAATHYLGSCPASLAASD 191 (368)
T ss_dssp TTSSCEEEEECSSSCEEEEEETTTEEEEEEECS------S---------C----CCC--EEEETTEEECCCCTTSCEEEE
T ss_pred CCCCEEEEEccCCCCeEEEEEEchhhceEEECC------C---------c----eEE--ccCCCeEEEEEcCCCCEEEEE
Confidence 998 49999975 677888 883335555321 0 0 011 223345677777777777777
Q ss_pred cCC
Q 014345 166 LHF 168 (426)
Q Consensus 166 l~~ 168 (426)
...
T Consensus 192 ~~~ 194 (368)
T 1mda_H 192 LAA 194 (368)
T ss_dssp CCS
T ss_pred Ccc
Confidence 654
No 118
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=96.73 E-value=0.076 Score=48.88 Aligned_cols=125 Identities=11% Similarity=0.021 Sum_probs=75.6
Q ss_pred cEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCC-EEEEECCCCEEEEEc--C
Q 014345 33 ELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADTMNMAIRKIS--D 109 (426)
Q Consensus 33 ~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LYVADt~N~rIrk~d--~ 109 (426)
+++|+....+.|..++... ++.......+ + ....|.+++++++|+ +|+++..++.|.+++ .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~---~~~~~~~~~~--------~-----~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 65 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEK---MAVDKVITIA--------D-----AGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVT 65 (337)
T ss_dssp EEEEEEETTTEEEEEETTT---TEEEEEEECT--------T-----CTTCCCCEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred cEEEEcCCCCeEEEEECCC---CcEEEEEEcC--------C-----CCCCccceEEcCCCCEEEEEeCCCCeEEEEECCC
Confidence 4666666777888887763 2222111110 0 001388999999984 899999889999999 3
Q ss_pred CCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEEC-----------CCCeEEEEEcCCCceEe-ec
Q 014345 110 SGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDR-----------GNRAIREIQLHFDDCAY-QY 175 (426)
Q Consensus 110 g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaDs-----------gN~rIr~I~l~~~~~~~-~~ 175 (426)
+.+ .++..+..+ ..-..|.+++ ++++| .||+++. .++.|.++++....... ..
T Consensus 66 ~~~~~~~~~~~~~------------~~~~~~~~~~-~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~ 132 (337)
T 1pby_B 66 GETLGRIDLSTPE------------ERVKSLFGAA-LSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE 132 (337)
T ss_dssp CCEEEEEECCBTT------------EEEECTTCEE-ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE
T ss_pred CCeEeeEEcCCcc------------cccccccceE-ECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEe
Confidence 443 333321100 0012477888 56666 7899862 35899999987655432 22
Q ss_pred CCCCcceEEEE
Q 014345 176 GSSFPLGIAVL 186 (426)
Q Consensus 176 ~~g~P~GIAv~ 186 (426)
....|.++++.
T Consensus 133 ~~~~~~~~~~s 143 (337)
T 1pby_B 133 APRQITMLAWA 143 (337)
T ss_dssp CCSSCCCEEEC
T ss_pred CCCCcceeEEC
Confidence 23346677755
No 119
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=96.70 E-value=0.022 Score=57.92 Aligned_cols=82 Identities=9% Similarity=-0.003 Sum_probs=55.0
Q ss_pred CCceEEEEcCCCc-EEEEEC---------CCCeEEEEeCCCCcccccEEE-ecCCCCcccccCCcccccccCCcceEEEc
Q 014345 21 IEPYSVEVLPGGE-LLILDS---------ANSNLYRISSSLSLYSRPKLV-AGSAEGYSGHVDGKPREARMNHPKGLTVD 89 (426)
Q Consensus 21 ~~P~GIaVd~dG~-LYVaD~---------~n~rI~kid~dg~~~g~v~~v-aG~~~G~~G~~dG~a~~A~Ln~P~GIaVd 89 (426)
..|+ |++++||. |||++. ..+.|.+||..+.. .+..+ .+. |... ..-..|.+++++
T Consensus 79 ~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~--v~~~I~v~~--g~r~--------~~g~~P~~~a~s 145 (386)
T 3sjl_D 79 FLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL--PTADIELPD--APRF--------LVGTYPWMTSLT 145 (386)
T ss_dssp SSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC--EEEEEEETT--CCCC--------CBSCCGGGEEEC
T ss_pred CCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe--EEEEEECCC--cccc--------ccCCCCceEEEc
Confidence 4586 99999997 999984 24679999987532 12222 221 0000 012369999999
Q ss_pred CCCC-EEEEECC-CCEEEEEc--CCC-cEEE
Q 014345 90 DRGN-IYIADTM-NMAIRKIS--DSG-VTTI 115 (426)
Q Consensus 90 ~dG~-LYVADt~-N~rIrk~d--~g~-VstI 115 (426)
+||+ |||++.. .+.|.+|| .+. +.+|
T Consensus 146 pDGk~lyVan~~~~~~VsVID~~t~~vv~tI 176 (386)
T 3sjl_D 146 PDGKTLLFYQFSPAPAVGVVDLEGKAFKRML 176 (386)
T ss_dssp TTSSEEEEEECSSSCEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEEcCCCCeEEEEECCCCcEEEEE
Confidence 9987 9999974 78999999 444 3455
No 120
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.60 E-value=0.016 Score=58.26 Aligned_cols=105 Identities=12% Similarity=-0.078 Sum_probs=69.7
Q ss_pred CcEEEEECCCC----eEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCC-CEEEEEC-------
Q 014345 32 GELLILDSANS----NLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG-NIYIADT------- 99 (426)
Q Consensus 32 G~LYVaD~~n~----rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG-~LYVADt------- 99 (426)
..+||++...+ +|..||.+... .+..+.- | ..| +|++++|| .+||+++
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t~~--v~~~i~v------G-----------~~P-~i~~spDg~~lyVan~~~~r~~~ 91 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGCGV--TLGHSLG------A-----------FLS-LAVAGHSGSDFALASTSFARSAK 91 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTE--EEEEEEE------C-----------TTC-EEEECTTSSCEEEEEEEETTTTS
T ss_pred CeEEEECCccCCccceEEEEECCCCe--EEEEEeC------C-----------CCC-ceEECCCCCEEEEEccccccccc
Confidence 56999998877 88899987532 1222210 1 138 99999997 5999984
Q ss_pred --CCCEEEEEc--CCC-cEEEe-CCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECC-CCeEEE--EEcCC
Q 014345 100 --MNMAIRKIS--DSG-VTTIA-GGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRG-NRAIRE--IQLHF 168 (426)
Q Consensus 100 --~N~rIrk~d--~g~-VstIa-Gg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaDsg-N~rIr~--I~l~~ 168 (426)
..+.|.+|| .+. +.+|. ++.. + ......|.++++ +++| .|||++.. .+.|.+ ||+..
T Consensus 92 G~~~~~VsviD~~T~~vv~~I~v~~~~-~----------~~~g~~P~~ia~-SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 92 GKRTDYVEVFDPVTFLPIADIELPDAP-R----------FSVGPRVHIIGN-CASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp SSEEEEEEEECTTTCCEEEEEEETTSC-S----------CCBSCCTTSEEE-CTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CCCCCEEEEEECCCCCEEEEEECCCcc-c----------cccCCCcceEEE-cCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 367899999 444 45553 2110 0 001246999995 6655 89999975 678888 77654
No 121
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.50 E-value=0.065 Score=55.76 Aligned_cols=155 Identities=11% Similarity=0.069 Sum_probs=84.7
Q ss_pred ecCCcEEEEEecCCCCCCCceEEEE--cCCCc-EEEEEC-----CCCeEEEEeCCCCcccccEEEecCCCCcccccCCcc
Q 014345 4 FESGYTVETVFDGSKLGIEPYSVEV--LPGGE-LLILDS-----ANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKP 75 (426)
Q Consensus 4 ~~~G~tv~tv~~g~~l~~~P~GIaV--d~dG~-LYVaD~-----~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a 75 (426)
+..+..+.++..+.. +..|..|.+ +++|. +||+.. .++.|.++..+.+...... ++..... ...+..
T Consensus 235 ~~~~k~~~tI~vg~~-g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~-vIdi~~~---~v~~~l 309 (462)
T 2ece_A 235 LRKRKRIHSLTLGEE-NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEK-VIEIPAE---PLEGNL 309 (462)
T ss_dssp TTTTEEEEEEESCTT-EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEE-EEEECCE---ECCSSC
T ss_pred CCCCcEeeEEecCCC-CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEE-EEeCCCc---cccccc
Confidence 344544444444322 346888877 88886 888887 7788887665532111111 1111100 000000
Q ss_pred c------ccccCCcceEEEcCCCC-EEEEECCCCEEEEEc-C-CC-cE---EEe-CCccCCCCCCCCCCcccccCCCCCe
Q 014345 76 R------EARMNHPKGLTVDDRGN-IYIADTMNMAIRKIS-D-SG-VT---TIA-GGKWGRGGGHVDGPSEDAKFSNDFD 141 (426)
Q Consensus 76 ~------~A~Ln~P~GIaVd~dG~-LYVADt~N~rIrk~d-~-g~-Vs---tIa-Gg~~g~~~G~~dG~~~~a~f~~P~g 141 (426)
. .+.-+.|.+|.+++||+ |||++.+.+.|.+++ . .. .. .+. ||.... .....| ..--..|.+
T Consensus 310 p~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~-~~~~~G---~~~~ggPr~ 385 (462)
T 2ece_A 310 PEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHR-ADHPAG---HKLTGAPQM 385 (462)
T ss_dssp CGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTC-BCCTTS---CCCCSCCCC
T ss_pred cccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeecc-cccccc---ccCCCCCCE
Confidence 0 00024699999999986 999999999999998 2 22 22 222 111000 000001 001136999
Q ss_pred eEEECCCC-eEEEEE--------C-----CCCeEEEEEcCC
Q 014345 142 VVYIGSSC-SLLVID--------R-----GNRAIREIQLHF 168 (426)
Q Consensus 142 Ia~vd~~G-~LYVaD--------s-----gN~rIr~I~l~~ 168 (426)
++ ++++| .|||++ . .+..+.+++.+.
T Consensus 386 ~~-lSpDGk~LyVaNsl~~~wd~Qfyp~~~~~~~~~~~vd~ 425 (462)
T 2ece_A 386 LE-ISRDGRRVYVTNSLYSTWDNQFYPEGLKGWMVKLNANP 425 (462)
T ss_dssp EE-ECTTSSEEEEECCCCHHHHHHHSTTCCCCEEEEEEECT
T ss_pred EE-EcCCCCEEEEEcCCcccccccccCCCCceEEEEEEecC
Confidence 99 56656 799999 3 566777665553
No 122
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.48 E-value=0.024 Score=54.07 Aligned_cols=107 Identities=20% Similarity=0.212 Sum_probs=69.3
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCC----cccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEE
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLS----LYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIA 97 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~----~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVA 97 (426)
....||++|+|.||++ .++.++++++..+ +.+. .+.+|.. |..++ ..|.+|++|.||++
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s-~t~IG~~-Gw~~F-------------~a~~fD~~G~LYav 104 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGR-AKKIGNG-GWNQF-------------QFLFFDPNGYLYAV 104 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHH-CEEEECS-CGGGC-------------SEEEECTTSCEEEE
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCccccccc-ccEeccc-ccccc-------------eEEEECCCCCEEEe
Confidence 5679999999999999 5778999988531 1122 3444442 22221 56999999999999
Q ss_pred ECCCCEEEEEcC--CC---c---EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEE
Q 014345 98 DTMNMAIRKISD--SG---V---TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQ 165 (426)
Q Consensus 98 Dt~N~rIrk~d~--g~---V---stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~ 165 (426)
.++.|.+++. .+ + .+..|..... .| ..|+ .+++|.||-+. ++++.+-.
T Consensus 105 --~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~------------~~---~~lf-f~p~G~Lyav~--dg~lyr~~ 160 (236)
T 1tl2_A 105 --SKDKLYKASPPQSDTDNWIARATEVGSGGWS------------GF---KFLF-FHPNGYLYAVH--GQQFYKAL 160 (236)
T ss_dssp --ETTEEEEESCCCSTTCCHHHHSEEEECSSGG------------GE---EEEE-ECTTSCEEEEE--TTEEEEEC
T ss_pred --CCCEEEEeCCCcCCCCceeccccEeccCCCC------------ce---EEEE-ECCCceEEEEe--CCcEEecC
Confidence 3589999982 22 1 1222211000 12 4454 79999999999 55665543
No 123
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.38 E-value=0.2 Score=50.40 Aligned_cols=161 Identities=12% Similarity=0.117 Sum_probs=92.8
Q ss_pred CceEEEEcCC----C----cEEEEECC--CCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEE--c
Q 014345 22 EPYSVEVLPG----G----ELLILDSA--NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTV--D 89 (426)
Q Consensus 22 ~P~GIaVd~d----G----~LYVaD~~--n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaV--d 89 (426)
.+++|.+-++ | -+|+++.. +++|..|+.+... +.+..+.+.. .+....+..|.|||+ +
T Consensus 69 ~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~-~~l~~i~~~~---------~pv~t~~~~pyGlcly~~ 138 (355)
T 3amr_A 69 KLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKN-GTLQSMTDPD---------HPIATAINEVYGFTLYHS 138 (355)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTT-CCEEECSCTT---------SCEECCCSSCCCEEEEEC
T ss_pred CcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCC-Cceeeccccc---------cCcCCCCCCeeEEEEEec
Confidence 6788888662 2 25888988 8988777443211 2333331110 000123678999999 7
Q ss_pred CC-CC--EEEEECCCCEEEEEc-----CCCcE-EEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCe
Q 014345 90 DR-GN--IYIADTMNMAIRKIS-----DSGVT-TIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRA 160 (426)
Q Consensus 90 ~d-G~--LYVADt~N~rIrk~d-----~g~Vs-tIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~r 160 (426)
+. |. +||.+.. +++..+. ++.++ ++... -. .+ ..|.++++.+..+.|||++... .
T Consensus 139 ~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~-f~--lg-----------sq~EgcvvDd~~g~Lyv~eEd~-G 202 (355)
T 3amr_A 139 QKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRA-FK--MN-----------SQTEGMAADDEYGRLYIAEEDE-A 202 (355)
T ss_dssp TTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEE-EE--CS-----------SCEEEEEEETTTTEEEEEETTT-E
T ss_pred CCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEE-ec--CC-----------CCcceEEEcCCCCeEEEecccc-e
Confidence 64 54 7788875 7777644 22232 11110 00 00 1466777666789999999975 4
Q ss_pred EEEEEcCCCc-----eE-eecCC---CCcceEEEEecCCceEEEEEEEecccceeee
Q 014345 161 IREIQLHFDD-----CA-YQYGS---SFPLGIAVLLAAGFFGYMLALLQRRVGTIVS 208 (426)
Q Consensus 161 Ir~I~l~~~~-----~~-~~~~~---g~P~GIAv~~g~g~~Gy~~a~lq~~~g~~~~ 208 (426)
|++|+.+... .. ..... .-+.||++..+..--||.++.-|..-...+.
T Consensus 203 Iw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vy 259 (355)
T 3amr_A 203 IWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIY 259 (355)
T ss_dssp EEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEE
T ss_pred EEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEE
Confidence 9999966322 11 11112 2478899876654567888777665444444
No 124
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=96.33 E-value=0.042 Score=53.72 Aligned_cols=74 Identities=11% Similarity=0.109 Sum_probs=50.5
Q ss_pred CCceEEEEcCCCc-EEEEEC---------CCCeEEEEeCCCCcccccEEEe-cCCCCcccccCCcccccccCCcceEEEc
Q 014345 21 IEPYSVEVLPGGE-LLILDS---------ANSNLYRISSSLSLYSRPKLVA-GSAEGYSGHVDGKPREARMNHPKGLTVD 89 (426)
Q Consensus 21 ~~P~GIaVd~dG~-LYVaD~---------~n~rI~kid~dg~~~g~v~~va-G~~~G~~G~~dG~a~~A~Ln~P~GIaVd 89 (426)
..| +|++++||. |||++. ..+.|..||..... .+..+. +.. .. ..-..|.+|+++
T Consensus 51 ~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~--~~~~i~~~~~-~~----------~~g~~p~~i~~s 116 (361)
T 2oiz_A 51 FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT--FEKEISLPPK-RV----------QGLNYDGLFRQT 116 (361)
T ss_dssp EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC--EEEEEEECTT-BC----------CBCCCGGGEEEC
T ss_pred CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc--EEEEEEcCcc-cc----------ccCCCcceEEEC
Confidence 368 999999986 899974 23569999876321 122221 110 00 012469999999
Q ss_pred CCCC-EEEEECC-CCEEEEEc
Q 014345 90 DRGN-IYIADTM-NMAIRKIS 108 (426)
Q Consensus 90 ~dG~-LYVADt~-N~rIrk~d 108 (426)
++|+ |||++.. .+.|.+||
T Consensus 117 pdg~~l~v~n~~~~~~v~v~d 137 (361)
T 2oiz_A 117 TDGKFIVLQNASPATSIGIVD 137 (361)
T ss_dssp TTSSEEEEEEESSSEEEEEEE
T ss_pred CCCCEEEEECCCCCCeEEEEE
Confidence 9986 9999875 68999999
No 125
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.29 E-value=0.24 Score=45.31 Aligned_cols=114 Identities=6% Similarity=-0.005 Sum_probs=75.2
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
...+++++++|+++++-..++.|..++.... +....... -.....++++++|.++++-..+
T Consensus 185 ~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~---~~~~~~~~----------------~~~v~~~~~s~~~~~l~~~~~~ 245 (337)
T 1gxr_A 185 GASCIDISNDGTKLWTGGLDNTVRSWDLREG---RQLQQHDF----------------TSQIFSLGYCPTGEWLAVGMES 245 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTT---EEEEEEEC----------------SSCEEEEEECTTSSEEEEEETT
T ss_pred ceEEEEECCCCCEEEEEecCCcEEEEECCCC---ceEeeecC----------------CCceEEEEECCCCCEEEEEcCC
Confidence 5778899988887777667888988887642 22222111 1125679999999877777778
Q ss_pred CEEEEEc-C-CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceE
Q 014345 102 MAIRKIS-D-SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCA 172 (426)
Q Consensus 102 ~rIrk~d-~-g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~ 172 (426)
+.|+.++ . +....+.+. -.....++ +.+++.++++-..++.|+.+++......
T Consensus 246 ~~i~~~~~~~~~~~~~~~~-----------------~~~v~~~~-~~~~~~~l~~~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 246 SNVEVLHVNKPDKYQLHLH-----------------ESCVLSLK-FAYCGKWFVSTGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp SCEEEEETTSSCEEEECCC-----------------SSCEEEEE-ECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CcEEEEECCCCCeEEEcCC-----------------ccceeEEE-ECCCCCEEEEecCCCcEEEEECCCCeEE
Confidence 8899998 3 333333221 11345676 5677777777767889999998765544
No 126
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=96.22 E-value=0.02 Score=61.18 Aligned_cols=122 Identities=17% Similarity=0.154 Sum_probs=73.9
Q ss_pred cccCCcceEEEcC-CCCEEEEECCC---------------------CEEEEEc-CCC--------cE--EEeCCccCCCC
Q 014345 78 ARMNHPKGLTVDD-RGNIYIADTMN---------------------MAIRKIS-DSG--------VT--TIAGGKWGRGG 124 (426)
Q Consensus 78 A~Ln~P~GIaVd~-dG~LYVADt~N---------------------~rIrk~d-~g~--------Vs--tIaGg~~g~~~ 124 (426)
..|..|.+|++++ +|.||||=+.| +.|.++. +++ .. .++|.......
T Consensus 381 T~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~ 460 (592)
T 4a9v_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred ccccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccc
Confidence 3578899999998 79999996643 5677776 221 12 23332211100
Q ss_pred C---CCCCCcccccCCCCCeeEEECCCCeEEE-EEC-----------CCCeEEEEEcCCCceEeec---CCCCcceEEEE
Q 014345 125 G---HVDGPSEDAKFSNDFDVVYIGSSCSLLV-IDR-----------GNRAIREIQLHFDDCAYQY---GSSFPLGIAVL 186 (426)
Q Consensus 125 G---~~dG~~~~a~f~~P~gIa~vd~~G~LYV-aDs-----------gN~rIr~I~l~~~~~~~~~---~~g~P~GIAv~ 186 (426)
+ ...+......|+.|.+|+ ++++|+||| +|. +++.|.++++......... ....|.|||+.
T Consensus 461 ~~~~g~~~~~~~~~fnsPDnL~-fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafS 539 (592)
T 4a9v_A 461 TPKGGSSNITPQNMFNSPDGLG-FDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFS 539 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEE-ECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEEC
T ss_pred ccccCccCccccCccCCCCceE-ECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEEC
Confidence 0 001122344799999999 699999999 885 3568999988654443322 12347888877
Q ss_pred ecCCceEEEEEEEeccc
Q 014345 187 LAAGFFGYMLALLQRRV 203 (426)
Q Consensus 187 ~g~g~~Gy~~a~lq~~~ 203 (426)
.-. -+++...|++-
T Consensus 540 PD~---ktLfV~vQHPG 553 (592)
T 4a9v_A 540 PDQ---KTLFVGIQHPG 553 (592)
T ss_dssp TTS---SEEEEEEESTT
T ss_pred CCC---CEEEEEEeCCC
Confidence 332 23455555543
No 127
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.16 E-value=0.079 Score=56.81 Aligned_cols=72 Identities=8% Similarity=0.134 Sum_probs=55.7
Q ss_pred CCcceEEEcCCCC-EEEEECCCCEEEEEcCCCcE------------EEeCCccCCCCCCCCCCcccccCCCCCeeEEECC
Q 014345 81 NHPKGLTVDDRGN-IYIADTMNMAIRKISDSGVT------------TIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGS 147 (426)
Q Consensus 81 n~P~GIaVd~dG~-LYVADt~N~rIrk~d~g~Vs------------tIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~ 147 (426)
..|.||.+++||. +||++...++|.+++-.... .++--..| ..|.+++ +++
T Consensus 277 ~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG---------------~gP~h~a-F~~ 340 (595)
T 1fwx_A 277 NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG---------------LGPLHTA-FDG 340 (595)
T ss_dssp SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC---------------SCEEEEE-ECT
T ss_pred CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC---------------CCcceEE-ECC
Confidence 4799999999997 99999999999999933221 11111101 3699999 588
Q ss_pred CCeEEEEECCCCeEEEEEcCC
Q 014345 148 SCSLLVIDRGNRAIREIQLHF 168 (426)
Q Consensus 148 ~G~LYVaDsgN~rIr~I~l~~ 168 (426)
+|++|++..-.+.|.+++.+.
T Consensus 341 dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 341 RGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp TSEEEEEETTTTEEEEEEHHH
T ss_pred CCeEEEEEecCCcEEEEEhhH
Confidence 889999999999999999764
No 128
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.07 E-value=0.074 Score=49.40 Aligned_cols=68 Identities=15% Similarity=0.186 Sum_probs=43.7
Q ss_pred CcceEEEcCCCCEEEEECCCCEEEEEc-CCCcE-EEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCC
Q 014345 82 HPKGLTVDDRGNIYIADTMNMAIRKIS-DSGVT-TIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNR 159 (426)
Q Consensus 82 ~P~GIaVd~dG~LYVADt~N~rIrk~d-~g~Vs-tIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~ 159 (426)
....++++++|+|||+.. ++.|..++ ++... .+... . ..+..++ ++.++.|||+.. ++
T Consensus 216 ~~~~~~~~~~g~l~v~t~-~~gl~~~~~~g~~~~~~~~~-~----------------~~~~~~~-~~~~g~l~v~t~-~g 275 (330)
T 3hxj_A 216 TVTRPAISEDGTIYVTSL-DGHLYAINPDGTEKWRFKTG-K----------------RIESSPV-IGNTDTIYFGSY-DG 275 (330)
T ss_dssp CCSCCEECTTSCEEEEET-TTEEEEECTTSCEEEEEECS-S----------------CCCSCCE-ECTTSCEEEECT-TC
T ss_pred ceeceEECCCCeEEEEcC-CCeEEEECCCCCEeEEeeCC-C----------------Cccccce-EcCCCeEEEecC-CC
Confidence 356788999999999976 46788888 44432 22110 0 0122345 577899999875 45
Q ss_pred eEEEEEcCCC
Q 014345 160 AIREIQLHFD 169 (426)
Q Consensus 160 rIr~I~l~~~ 169 (426)
.|.+++..+.
T Consensus 276 gl~~~d~~g~ 285 (330)
T 3hxj_A 276 HLYAINPDGT 285 (330)
T ss_dssp EEEEECTTSC
T ss_pred CEEEECCCCc
Confidence 7888887543
No 129
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.05 E-value=0.36 Score=45.76 Aligned_cols=116 Identities=12% Similarity=0.151 Sum_probs=79.0
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
....++++++|+++++-...+.|..++..... .+..+.+. -.....|+++++|.++++-..+
T Consensus 166 ~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~--~~~~~~~h----------------~~~v~~l~~spd~~~l~s~s~d 227 (321)
T 3ow8_A 166 FILSIAYSPDGKYLASGAIDGIINIFDIATGK--LLHTLEGH----------------AMPIRSLTFSPDSQLLVTASDD 227 (321)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCC----------------SSCCCEEEECTTSCEEEEECTT
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCc--EEEEEccc----------------CCceeEEEEcCCCCEEEEEcCC
Confidence 45788999999988887788899999886421 12222221 1124679999999988888888
Q ss_pred CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEe
Q 014345 102 MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAY 173 (426)
Q Consensus 102 ~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~~ 173 (426)
+.|+.++ .+. +.++.+- -.....++ +.+++.++++-...+.|+.+++....+..
T Consensus 228 g~i~iwd~~~~~~~~~~~~h-----------------~~~v~~~~-~sp~~~~l~s~s~D~~v~iwd~~~~~~~~ 284 (321)
T 3ow8_A 228 GYIKIYDVQHANLAGTLSGH-----------------ASWVLNVA-FCPDDTHFVSSSSDKSVKVWDVGTRTCVH 284 (321)
T ss_dssp SCEEEEETTTCCEEEEECCC-----------------SSCEEEEE-ECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CeEEEEECCCcceeEEEcCC-----------------CCceEEEE-ECCCCCEEEEEeCCCcEEEEeCCCCEEEE
Confidence 8899998 333 3344331 01235677 46777777777778899999988766543
No 130
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=95.92 E-value=0.053 Score=57.35 Aligned_cols=106 Identities=10% Similarity=-0.066 Sum_probs=73.2
Q ss_pred EcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCC-EEEEECCCCEEEE
Q 014345 28 VLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADTMNMAIRK 106 (426)
Q Consensus 28 Vd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LYVADt~N~rIrk 106 (426)
+|+.+.+||+....+.|..||.++. ++...+.. | ..|.++++++||+ +||++. .+.|.+
T Consensus 163 ~d~~~~~~V~~~~~~~V~viD~~t~---~v~~~i~~-----g-----------~~p~~v~~SpDGr~lyv~~~-dg~V~v 222 (567)
T 1qks_A 163 WDLENLFSVTLRDAGQIALIDGSTY---EIKTVLDT-----G-----------YAVHISRLSASGRYLFVIGR-DGKVNM 222 (567)
T ss_dssp CCGGGEEEEEETTTTEEEEEETTTC---CEEEEEEC-----S-----------SCEEEEEECTTSCEEEEEET-TSEEEE
T ss_pred cCCCceEEEEeCCCCeEEEEECCCC---eEEEEEeC-----C-----------CCccceEECCCCCEEEEEcC-CCeEEE
Confidence 4455679999999999999998752 22222211 1 1378999999987 899885 578999
Q ss_pred EcCC--C---cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEEC---CCC-eEEEEECCCCeEEEEEcCCCce
Q 014345 107 ISDS--G---VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIG---SSC-SLLVIDRGNRAIREIQLHFDDC 171 (426)
Q Consensus 107 ~d~g--~---VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd---~~G-~LYVaDsgN~rIr~I~l~~~~~ 171 (426)
||.. + +.++..+ ..|.+|++.. ++| .|||++...+.|.+|+......
T Consensus 223 iD~~~~t~~~v~~i~~G------------------~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~ 278 (567)
T 1qks_A 223 IDLWMKEPTTVAEIKIG------------------SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEP 278 (567)
T ss_dssp EETTSSSCCEEEEEECC------------------SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCE
T ss_pred EECCCCCCcEeEEEecC------------------CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcE
Confidence 9942 3 2233211 1478998531 355 8999999999999999765443
No 131
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=95.88 E-value=0.46 Score=45.00 Aligned_cols=114 Identities=9% Similarity=0.127 Sum_probs=75.5
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
....++++++|+++++-...+.|..++..... ....+.+. -.....++++++|+++++-..+
T Consensus 124 ~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~--~~~~~~~~----------------~~~v~~~~~spdg~~lasg~~d 185 (321)
T 3ow8_A 124 DAWTLAFSPDSQYLATGTHVGKVNIFGVESGK--KEYSLDTR----------------GKFILSIAYSPDGKYLASGAID 185 (321)
T ss_dssp CCCCEEECTTSSEEEEECTTSEEEEEETTTCS--EEEEEECS----------------SSCEEEEEECTTSSEEEEEETT
T ss_pred cEEEEEECCCCCEEEEEcCCCcEEEEEcCCCc--eeEEecCC----------------CceEEEEEECCCCCEEEEEcCC
Confidence 35678888888888887778888888776421 11222111 1124679999999988887778
Q ss_pred CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 014345 102 MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 171 (426)
Q Consensus 102 ~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~ 171 (426)
+.|+.++ .+. +.++.+-. .....|+ +.+++.++++-...+.|+.+++....+
T Consensus 186 g~i~iwd~~~~~~~~~~~~h~-----------------~~v~~l~-~spd~~~l~s~s~dg~i~iwd~~~~~~ 240 (321)
T 3ow8_A 186 GIINIFDIATGKLLHTLEGHA-----------------MPIRSLT-FSPDSQLLVTASDDGYIKIYDVQHANL 240 (321)
T ss_dssp SCEEEEETTTTEEEEEECCCS-----------------SCCCEEE-ECTTSCEEEEECTTSCEEEEETTTCCE
T ss_pred CeEEEEECCCCcEEEEEcccC-----------------CceeEEE-EcCCCCEEEEEcCCCeEEEEECCCcce
Confidence 8999999 333 33443210 1235677 577888888777788899998876544
No 132
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=95.85 E-value=0.25 Score=45.80 Aligned_cols=107 Identities=11% Similarity=0.039 Sum_probs=63.4
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
...+++++++|.|||+.. ++.|++++.++.. +..+. .. -..+..++++.+|+|||+.. +
T Consensus 216 ~~~~~~~~~~g~l~v~t~-~~gl~~~~~~g~~---~~~~~-~~---------------~~~~~~~~~~~~g~l~v~t~-~ 274 (330)
T 3hxj_A 216 TVTRPAISEDGTIYVTSL-DGHLYAINPDGTE---KWRFK-TG---------------KRIESSPVIGNTDTIYFGSY-D 274 (330)
T ss_dssp CCSCCEECTTSCEEEEET-TTEEEEECTTSCE---EEEEE-CS---------------SCCCSCCEECTTSCEEEECT-T
T ss_pred ceeceEECCCCeEEEEcC-CCeEEEECCCCCE---eEEee-CC---------------CCccccceEcCCCeEEEecC-C
Confidence 356677787888888764 5577777765421 11111 10 01134578888999999976 4
Q ss_pred CEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 014345 102 MAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 167 (426)
Q Consensus 102 ~rIrk~d-~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~ 167 (426)
+.|..++ ++.......... .....++ .+.+|.|||+.. ++.|+.....
T Consensus 275 ggl~~~d~~g~~~~~~~~~~----------------~~~~~~~-~d~~g~l~~gt~-~G~~~~~~~~ 323 (330)
T 3hxj_A 275 GHLYAINPDGTEKWNFETGS----------------WIIATPV-IDENGTIYFGTR-NGKFYALFNL 323 (330)
T ss_dssp CEEEEECTTSCEEEEEECSS----------------CCCSCCE-ECTTCCEEEECT-TSCEEEEEC-
T ss_pred CCEEEECCCCcEEEEEEcCC----------------ccccceE-EcCCCEEEEEcC-CCeEEEEecc
Confidence 5788898 444322221100 0223455 688999999875 5666666544
No 133
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=95.78 E-value=0.19 Score=50.64 Aligned_cols=106 Identities=10% Similarity=0.195 Sum_probs=73.1
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
...+++++++|.++++-..++.|..++.++. .+..+.|. -...+.|++.++|.+.++-..+
T Consensus 469 ~v~~~~~spd~~~las~~~d~~i~iw~~~~~---~~~~~~~h----------------~~~v~~l~~s~dg~~l~s~~~d 529 (577)
T 2ymu_A 469 SVRGVAFSPDGQTIASASDDKTVKLWNRNGQ---LLQTLTGH----------------SSSVRGVAFSPDGQTIASASDD 529 (577)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSC---EEEEEECC----------------SSCEEEEEECTTSSCEEEEETT
T ss_pred CEEEEEEcCCCCEEEEEeCCCEEEEEcCCCC---EEEEEeCC----------------CCCEEEEEEcCCCCEEEEEECc
Confidence 4678999999998888778889999987642 23334332 1125689999999877776668
Q ss_pred CEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEE
Q 014345 102 MAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREI 164 (426)
Q Consensus 102 ~rIrk~d-~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I 164 (426)
+.|+.++ ++. +.++.|-. ...++|+ +.++|..+++-..++.|+..
T Consensus 530 g~v~lwd~~~~~~~~~~~h~-----------------~~v~~~~-fs~dg~~l~s~~~D~~i~~W 576 (577)
T 2ymu_A 530 KTVKLWNRNGQLLQTLTGHS-----------------SSVWGVA-FSPDGQTIASASSDKTVKLW 576 (577)
T ss_dssp SEEEEECTTSCEEEEEECCS-----------------SCEEEEE-ECTTSSCEEEEETTSCEEEE
T ss_pred CEEEEEeCCCCEEEEEcCCC-----------------CCEEEEE-EcCCCCEEEEEeCCCEEEEe
Confidence 8999999 555 45554410 1235677 46778777776667777765
No 134
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=95.78 E-value=0.066 Score=54.36 Aligned_cols=106 Identities=14% Similarity=0.251 Sum_probs=72.7
Q ss_pred CCceEEEEcCC----C-cEEEEECCCCeEEEEeCC----CCcccccEEEecCCCCcccccCCcccccccCCcceEEEc-C
Q 014345 21 IEPYSVEVLPG----G-ELLILDSANSNLYRISSS----LSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVD-D 90 (426)
Q Consensus 21 ~~P~GIaVd~d----G-~LYVaD~~n~rI~kid~d----g~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd-~ 90 (426)
.+-.|||++++ + .||++-....+++++... .+....+..+ |. .|. .....++++| .
T Consensus 220 ~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~-G~----kg~---------~s~~~~~~~D~~ 285 (381)
T 3q6k_A 220 AGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELL-GN----RGK---------YNDAIALAYDPK 285 (381)
T ss_dssp CCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEE-EE----CCT---------TCCEEEEEECTT
T ss_pred cCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEe-ee----cCC---------CCCcceEEEeCC
Confidence 36789999986 4 499999888899998532 1111223322 21 110 1123467897 7
Q ss_pred CCCEEEEECCCCEEEEEc-CC------CcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEEC
Q 014345 91 RGNIYIADTMNMAIRKIS-DS------GVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDR 156 (426)
Q Consensus 91 dG~LYVADt~N~rIrk~d-~g------~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDs 156 (426)
+|+||+++..++.|..++ ++ .+.+++- +..|.+|.++. ++.+|.|||...
T Consensus 286 ~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~---------------d~~l~~pd~~~-i~~~g~Lwv~sn 342 (381)
T 3q6k_A 286 TKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYT---------------SSRFVFGTDIS-VDSKGGLWFMSN 342 (381)
T ss_dssp TCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEE---------------CTTCCSEEEEE-ECTTSCEEEEEC
T ss_pred CCeEEEEeccCCeEEEEeCCCCccccCceEEEEE---------------CCCccccCeEE-ECCCCeEEEEEC
Confidence 899999999999999999 44 2355542 22688999998 788999999873
No 135
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=95.74 E-value=0.44 Score=47.83 Aligned_cols=111 Identities=9% Similarity=0.150 Sum_probs=74.9
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
...+|++.+|+.++++-..++.|..++.++. .+..+.+. -.....|+++++|.++++-..+
T Consensus 428 ~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~---~~~~~~~~----------------~~~v~~~~~spd~~~las~~~d 488 (577)
T 2ymu_A 428 SVWGVAFSPDDQTIASASDDKTVKLWNRNGQ---LLQTLTGH----------------SSSVRGVAFSPDGQTIASASDD 488 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTSC---EEEEEECC----------------SSCEEEEEECTTSCEEEEEETT
T ss_pred CeEEEEECCCCCEEEEEcCCCEEEEEECCCC---EEEEEcCC----------------CCCEEEEEEcCCCCEEEEEeCC
Confidence 4578899999988777777888888887642 23333332 1124679999999988887778
Q ss_pred CEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCC
Q 014345 102 MAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFD 169 (426)
Q Consensus 102 ~rIrk~d-~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~ 169 (426)
+.|+.++ ++. +.++.+-. .....|+ +.++|.++++-...+.|+.++..+.
T Consensus 489 ~~i~iw~~~~~~~~~~~~h~-----------------~~v~~l~-~s~dg~~l~s~~~dg~v~lwd~~~~ 540 (577)
T 2ymu_A 489 KTVKLWNRNGQLLQTLTGHS-----------------SSVRGVA-FSPDGQTIASASDDKTVKLWNRNGQ 540 (577)
T ss_dssp SEEEEEETTSCEEEEEECCS-----------------SCEEEEE-ECTTSSCEEEEETTSEEEEECTTSC
T ss_pred CEEEEEcCCCCEEEEEeCCC-----------------CCEEEEE-EcCCCCEEEEEECcCEEEEEeCCCC
Confidence 8999999 555 44554310 1235666 4667776666666778888876543
No 136
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.71 E-value=0.13 Score=51.83 Aligned_cols=84 Identities=13% Similarity=0.156 Sum_probs=55.1
Q ss_pred EecCCCCCCCceEEEEcC-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccC-CcceEEEc-
Q 014345 13 VFDGSKLGIEPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMN-HPKGLTVD- 89 (426)
Q Consensus 13 v~~g~~l~~~P~GIaVd~-dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln-~P~GIaVd- 89 (426)
+.....++..|.|+++|+ .|.|||++... .|++++.+.........++-.+ .+ .|. .+.||++.
T Consensus 172 lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~-GIw~~da~p~~~~~~~~v~~~~-------~g-----~l~aDvEGLai~~ 238 (355)
T 3amr_A 172 KVRAFKMNSQTEGMAADDEYGRLYIAEEDE-AIWKFSAEPDGGSNGTVIDRAD-------GR-----HLTRDIEGLTIYY 238 (355)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEETTT-EEEEEECSTTSCSCCEEEEEBS-------SS-----SBCSCEEEEEEEE
T ss_pred EEEEecCCCCcceEEEcCCCCeEEEecccc-eEEEEeCCcCCCCCceEEEEec-------CC-----ccccCcceEEEEe
Confidence 333344556899999997 68899999764 5999995522101122222110 00 133 58999995
Q ss_pred -CC--CCEEEEECCCCEEEEEcC
Q 014345 90 -DR--GNIYIADTMNMAIRKISD 109 (426)
Q Consensus 90 -~d--G~LYVADt~N~rIrk~d~ 109 (426)
++ |.|+|++-+++...+++.
T Consensus 239 ~~~g~gyLivSsQG~~s~~Vydr 261 (355)
T 3amr_A 239 AADGKGYLMASSQGNSSYAIYDR 261 (355)
T ss_dssp CGGGCEEEEEEEGGGTEEEEEES
T ss_pred cCCCCEEEEEEcCCCCEEEEEEC
Confidence 33 459999999999999993
No 137
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=95.51 E-value=0.41 Score=48.53 Aligned_cols=154 Identities=12% Similarity=0.072 Sum_probs=93.1
Q ss_pred CceEEEEc-C-------CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcc---c--ccCCcccccccCCcceEEE
Q 014345 22 EPYSVEVL-P-------GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYS---G--HVDGKPREARMNHPKGLTV 88 (426)
Q Consensus 22 ~P~GIaVd-~-------dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~---G--~~dG~a~~A~Ln~P~GIaV 88 (426)
.-.+|+|| . ++-+||+|.....|+++|...+ +...+.... ... + ..+|.... ....-.|||+
T Consensus 153 ~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~---~swRv~~~~-~~pd~~~~~~i~G~~~~-~~~Gi~gIaL 227 (381)
T 3q6k_A 153 YFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQ---DSWNVTHPT-FKAERPTKFDYGGKEYE-FKAGIFGITL 227 (381)
T ss_dssp GEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTT---EEEEEECGG-GSCCSCEEEEETTEEEE-ECCCEEEEEE
T ss_pred ccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCC---cEEEEccCC-CccccCcceEECCEEeE-eccCceEEEe
Confidence 46789998 2 3458999999999999998853 333333211 111 0 01222110 1135679999
Q ss_pred cCC----C-CEEEEECCCCEEEEEc-----CCCc---EEEeCCccCCCCCCCCCCcccccCCCCCeeEEEC-CCCeEEEE
Q 014345 89 DDR----G-NIYIADTMNMAIRKIS-----DSGV---TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIG-SSCSLLVI 154 (426)
Q Consensus 89 d~d----G-~LYVADt~N~rIrk~d-----~g~V---stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd-~~G~LYVa 154 (426)
+++ + .||++-....++..+. +... ....|.+. + -+.-.+++ .| .+|+||++
T Consensus 228 sp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg---------~-----~s~~~~~~-~D~~~G~ly~~ 292 (381)
T 3q6k_A 228 GDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRG---------K-----YNDAIALA-YDPKTKVIFFA 292 (381)
T ss_dssp CCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECC---------T-----TCCEEEEE-ECTTTCEEEEE
T ss_pred cCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecC---------C-----CCCcceEE-EeCCCCeEEEE
Confidence 986 3 5999999888888886 2211 11222110 0 00112345 55 79999999
Q ss_pred ECCCCeEEEEEcCC-C----c---eEeecCCCCcceEEEEecCCceEEEEEEE
Q 014345 155 DRGNRAIREIQLHF-D----D---CAYQYGSSFPLGIAVLLAAGFFGYMLALL 199 (426)
Q Consensus 155 DsgN~rIr~I~l~~-~----~---~~~~~~~g~P~GIAv~~g~g~~Gy~~a~l 199 (426)
+..++.|.+++.++ . . .......-.|.+++++ -.|++|.+.
T Consensus 293 ~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~----~~g~Lwv~s 341 (381)
T 3q6k_A 293 EANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVD----SKGGLWFMS 341 (381)
T ss_dssp ESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEEC----TTSCEEEEE
T ss_pred eccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEEC----CCCeEEEEE
Confidence 99999999999876 1 1 1223344578899886 245666543
No 138
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.45 E-value=0.46 Score=43.41 Aligned_cols=117 Identities=14% Similarity=0.062 Sum_probs=72.4
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
....++++++|+++++-..++.|..++...........+.+. -.....+++.++++++++-..+
T Consensus 99 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~----------------~~~i~~~~~~~~~~~l~~~~~d 162 (337)
T 1gxr_A 99 YIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSS----------------APACYALAISPDSKVCFSCCSD 162 (337)
T ss_dssp BEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECS----------------SSCEEEEEECTTSSEEEEEETT
T ss_pred cEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccC----------------CCceEEEEECCCCCEEEEEeCC
Confidence 467889999998777666778899998874210011112111 1124678999998877766667
Q ss_pred CEEEEEc-C-CCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceE
Q 014345 102 MAIRKIS-D-SGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCA 172 (426)
Q Consensus 102 ~rIrk~d-~-g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~ 172 (426)
+.|+.++ . +.. .++.+. -.....++ +.+++.++++-..++.|+.+++....+.
T Consensus 163 g~v~~~d~~~~~~~~~~~~~-----------------~~~i~~~~-~~~~~~~l~~~~~dg~i~~~d~~~~~~~ 218 (337)
T 1gxr_A 163 GNIAVWDLHNQTLVRQFQGH-----------------TDGASCID-ISNDGTKLWTGGLDNTVRSWDLREGRQL 218 (337)
T ss_dssp SCEEEEETTTTEEEEEECCC-----------------SSCEEEEE-ECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred CcEEEEeCCCCceeeeeecc-----------------cCceEEEE-ECCCCCEEEEEecCCcEEEEECCCCceE
Confidence 8899998 3 332 333221 01245666 4666766666556788888888765543
No 139
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=95.40 E-value=1.2 Score=41.03 Aligned_cols=128 Identities=16% Similarity=0.222 Sum_probs=82.8
Q ss_pred CCcEEEEEecCCCCCCCceEEEEcCCCcEEEEECCCCeEEEEeCCCCccccc-EEEecCCCCcccccCCcccccccCCcc
Q 014345 6 SGYTVETVFDGSKLGIEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRP-KLVAGSAEGYSGHVDGKPREARMNHPK 84 (426)
Q Consensus 6 ~G~tv~tv~~g~~l~~~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v-~~vaG~~~G~~G~~dG~a~~A~Ln~P~ 84 (426)
+.+.....+.+..- .-.+++++++|+++++-...+.|..++... +.. ..+.+. -....
T Consensus 11 ~~~~~~~~~~gh~~--~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~---~~~~~~~~~h----------------~~~v~ 69 (312)
T 4ery_A 11 PNYALKFTLAGHTK--AVSSVKFSPNGEWLASSSADKLIKIWGAYD---GKFEKTISGH----------------KLGIS 69 (312)
T ss_dssp CCCEEEEEECCCSS--CEEEEEECTTSSEEEEEETTSCEEEEETTT---CCEEEEECCC----------------SSCEE
T ss_pred CCceeEEEEcccCC--cEEEEEECCCCCEEEEeeCCCeEEEEeCCC---cccchhhccC----------------CCceE
Confidence 44455555555442 468999999999888777788898888763 222 222221 11246
Q ss_pred eEEEcCCCCEEEEECCCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeE
Q 014345 85 GLTVDDRGNIYIADTMNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAI 161 (426)
Q Consensus 85 GIaVd~dG~LYVADt~N~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rI 161 (426)
.|++.++|+++++-..++.|+.++ .+. +.++.+.. ..-..++ ..+++.++++-..++.|
T Consensus 70 ~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-----------------~~v~~~~-~~~~~~~l~s~~~d~~i 131 (312)
T 4ery_A 70 DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHS-----------------NYVFCCN-FNPQSNLIVSGSFDESV 131 (312)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCS-----------------SCEEEEE-ECSSSSEEEEEETTSCE
T ss_pred EEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCC-----------------CCEEEEE-EcCCCCEEEEEeCCCcE
Confidence 799999999888877788999998 344 34443311 0124455 46667777776677888
Q ss_pred EEEEcCCCceE
Q 014345 162 REIQLHFDDCA 172 (426)
Q Consensus 162 r~I~l~~~~~~ 172 (426)
+.+++....+.
T Consensus 132 ~iwd~~~~~~~ 142 (312)
T 4ery_A 132 RIWDVKTGKCL 142 (312)
T ss_dssp EEEETTTCCEE
T ss_pred EEEECCCCEEE
Confidence 88888765543
No 140
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=95.30 E-value=0.8 Score=43.36 Aligned_cols=116 Identities=11% Similarity=0.103 Sum_probs=77.1
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
....+++.++|.++++-...+.|..++..... .+..+.+. -.....|++.++|+++++-..+
T Consensus 186 ~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~--~~~~~~~h----------------~~~v~~v~~~p~~~~l~s~s~d 247 (340)
T 1got_B 186 DVMSLSLAPDTRLFVSGACDASAKLWDVREGM--CRQTFTGH----------------ESDINAICFFPNGNAFATGSDD 247 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCS--EEEEECCC----------------SSCEEEEEECTTSSEEEEEETT
T ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEECCCCe--eEEEEcCC----------------cCCEEEEEEcCCCCEEEEEcCC
Confidence 46788999999988888788889999876321 12222221 1125689999999988888888
Q ss_pred CEEEEEc-CC-C-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 014345 102 MAIRKIS-DS-G-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 171 (426)
Q Consensus 102 ~rIrk~d-~g-~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~ 171 (426)
+.|+.+| .. . +.++.... .......++ +.++|.++++-..++.|+.++.....+
T Consensus 248 ~~v~iwd~~~~~~~~~~~~~~---------------~~~~v~~~~-~s~~g~~l~~g~~d~~i~vwd~~~~~~ 304 (340)
T 1got_B 248 ATCRLFDLRADQELMTYSHDN---------------IICGITSVS-FSKSGRLLLAGYDDFNCNVWDALKADR 304 (340)
T ss_dssp SCEEEEETTTTEEEEEECCTT---------------CCSCEEEEE-ECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred CcEEEEECCCCcEEEEEccCC---------------cccceEEEE-ECCCCCEEEEECCCCeEEEEEcccCcE
Confidence 8999999 32 2 22221100 011235566 577888888887888999998765443
No 141
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=95.25 E-value=0.12 Score=53.44 Aligned_cols=123 Identities=15% Similarity=0.124 Sum_probs=66.2
Q ss_pred CceEEEEcCC----CcEEEEECCC------------CeEEEEeCCCC---c--ccccEEEecCCCCcccccCCccccccc
Q 014345 22 EPYSVEVLPG----GELLILDSAN------------SNLYRISSSLS---L--YSRPKLVAGSAEGYSGHVDGKPREARM 80 (426)
Q Consensus 22 ~P~GIaVd~d----G~LYVaD~~n------------~rI~kid~dg~---~--~g~v~~vaG~~~G~~G~~dG~a~~A~L 80 (426)
.+.|||++|+ |.|||+-+.. .+|.|+..... . ....+++....... + -
T Consensus 70 Gllgia~~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~-~----------~ 138 (463)
T 2wg3_C 70 GLLSLAFHPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELH-R----------K 138 (463)
T ss_dssp SEEEEEECTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESS-S----------S
T ss_pred cceeeEeCCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCC-C----------c
Confidence 6789999985 8899986421 48888876421 1 12233443221000 0 1
Q ss_pred CCcceEEEcCCCCEEEE--ECC---------------CCEEEEEc-CCCc----EEEeCCccCCCCCCCCCCcccccCCC
Q 014345 81 NHPKGLTVDDRGNIYIA--DTM---------------NMAIRKIS-DSGV----TTIAGGKWGRGGGHVDGPSEDAKFSN 138 (426)
Q Consensus 81 n~P~GIaVd~dG~LYVA--Dt~---------------N~rIrk~d-~g~V----stIaGg~~g~~~G~~dG~~~~a~f~~ 138 (426)
..-..|++++||.|||+ |.. ...|.+|+ ++.- ..|..+....+........-..-+.+
T Consensus 139 H~g~~l~fgpDG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RN 218 (463)
T 2wg3_C 139 HLGGQLLFGPDGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHD 218 (463)
T ss_dssp SCEEEEEECTTSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSS
T ss_pred ccCCcEeECCCCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCC
Confidence 23457999999999999 332 24677777 4421 11111100000000000111234789
Q ss_pred CCeeEEECCC-----C--eEEEEEC
Q 014345 139 DFDVVYIGSS-----C--SLLVIDR 156 (426)
Q Consensus 139 P~gIa~vd~~-----G--~LYVaDs 156 (426)
|+++++ |+. | .||++|.
T Consensus 219 p~gla~-dp~tg~~~G~l~~~~~D~ 242 (463)
T 2wg3_C 219 PGRCAV-DRHPTDININLTILCSDS 242 (463)
T ss_dssp CCBEEE-ESSCSSTTCSEEEEEECC
T ss_pred cceEEE-CCCCCCcccceEEEeccc
Confidence 999995 554 4 6788886
No 142
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=95.24 E-value=0.85 Score=43.99 Aligned_cols=122 Identities=9% Similarity=0.021 Sum_probs=80.0
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
.-..|++.++|.++++-...+.|..++..... .+.++...... ....+.....+++.++|.++++-..+
T Consensus 251 ~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~--~~~~~~~~~~~---------~~~~~~~v~~~~~s~~g~~l~~g~~d 319 (380)
T 3iz6_a 251 DINSVKFFPDGQRFGTGSDDGTCRLFDMRTGH--QLQVYNREPDR---------NDNELPIVTSVAFSISGRLLFAGYSN 319 (380)
T ss_dssp CCCEEEECTTSSEEEEECSSSCEEEEETTTTE--EEEEECCCCSS---------SCCSSCSCSEEEECSSSSEEEEECTT
T ss_pred CeEEEEEecCCCeEEEEcCCCeEEEEECCCCc--EEEEecccccc---------cccccCceEEEEECCCCCEEEEEECC
Confidence 35788999999988888888899999887421 12222221100 00112335789999999999998889
Q ss_pred CEEEEEc--CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 014345 102 MAIRKIS--DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 168 (426)
Q Consensus 102 ~rIrk~d--~g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~ 168 (426)
+.|+.+| .+.. ..+..... + .-..-..|+ +.++|.++++-...+.|+.+++.+
T Consensus 320 g~i~vwd~~~~~~~~~~~~~~~----~---------h~~~v~~l~-~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 320 GDCYVWDTLLAEMVLNLGTLQN----S---------HEGRISCLG-LSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp SCEEEEETTTCCEEEEECCSCS----S---------CCCCCCEEE-ECSSSSEEEEECTTSCEEEEECCS
T ss_pred CCEEEEECCCCceEEEEecccC----C---------CCCceEEEE-ECCCCCEEEEeeCCCCEEEEecCC
Confidence 9999999 3333 33321100 0 111346777 578888888888889999998764
No 143
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=95.22 E-value=0.63 Score=48.41 Aligned_cols=129 Identities=12% Similarity=-0.084 Sum_probs=72.4
Q ss_pred CceEEEEcCCCcE-EEEEC------------------CCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCC
Q 014345 22 EPYSVEVLPGGEL-LILDS------------------ANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNH 82 (426)
Q Consensus 22 ~P~GIaVd~dG~L-YVaD~------------------~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~ 82 (426)
.++++-+.+++++ |+++. ..++|..++.+.. ++...+-. +..| ..
T Consensus 189 ~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~---k~~~tI~v--g~~g-----------~~ 252 (462)
T 2ece_A 189 LAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR---KRIHSLTL--GEEN-----------RM 252 (462)
T ss_dssp CCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT---EEEEEEES--CTTE-----------EE
T ss_pred ccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC---cEeeEEec--CCCC-----------Cc
Confidence 4667878888884 55552 3789999998742 22111111 1001 13
Q ss_pred cceEEE--cCCCC-EEEEEC-----CCCEEEEEc--CCCc---EEEeCCccCCCCCCCC-CCc-ccccCCCCCeeEEECC
Q 014345 83 PKGLTV--DDRGN-IYIADT-----MNMAIRKIS--DSGV---TTIAGGKWGRGGGHVD-GPS-EDAKFSNDFDVVYIGS 147 (426)
Q Consensus 83 P~GIaV--d~dG~-LYVADt-----~N~rIrk~d--~g~V---stIaGg~~g~~~G~~d-G~~-~~a~f~~P~gIa~vd~ 147 (426)
|..|.+ +++|. +||+.. .++.|..+. ++.. .+|--..... .+... -+. ..+.-..|.+|.+..+
T Consensus 253 P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v-~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 253 ALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPL-EGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEEC-CSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred cceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccc-cccccccccccccCCCceeEEEECCC
Confidence 778877 88876 888877 777787665 3322 1211000000 00000 000 0000246899995444
Q ss_pred CCeEEEEECCCCeEEEEEcC
Q 014345 148 SCSLLVIDRGNRAIREIQLH 167 (426)
Q Consensus 148 ~G~LYVaDsgN~rIr~I~l~ 167 (426)
...|||++++.+.|.+++..
T Consensus 332 GrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 332 DKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp SCEEEEEETTTTEEEEEECS
T ss_pred CCEEEEEeCCCCEEEEEEec
Confidence 44799999999999999975
No 144
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.19 E-value=0.8 Score=43.47 Aligned_cols=112 Identities=7% Similarity=-0.041 Sum_probs=75.2
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCC-EEEEECC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADTM 100 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LYVADt~ 100 (426)
...++++.++|.++++-..++.|..++..+. .+..+.+. -.....|++++++. ++++-..
T Consensus 165 ~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~---~~~~~~~h----------------~~~v~~~~~~~~~~~~l~s~~~ 225 (383)
T 3ei3_B 165 WYCCVDVSVSRQMLATGDSTGRLLLLGLDGH---EIFKEKLH----------------KAKVTHAEFNPRCDWLMATSSV 225 (383)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEEETTSC---EEEEEECS----------------SSCEEEEEECSSCTTEEEEEET
T ss_pred CeEEEEECCCCCEEEEECCCCCEEEEECCCC---EEEEeccC----------------CCcEEEEEECCCCCCEEEEEeC
Confidence 4678899999887777777889999988642 23333322 12357899999988 7777777
Q ss_pred CCEEEEEc--C----CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECC-CCeEEEEECCCCeEEEEEcCCCc
Q 014345 101 NMAIRKIS--D----SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGS-SCSLLVIDRGNRAIREIQLHFDD 170 (426)
Q Consensus 101 N~rIrk~d--~----g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~-~G~LYVaDsgN~rIr~I~l~~~~ 170 (426)
++.|+.++ . +......+. -.....|+ +.+ ++.++++-..++.|+.+++....
T Consensus 226 d~~i~iwd~~~~~~~~~~~~~~~~-----------------~~~v~~~~-~s~~~~~~l~~~~~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 226 DATVKLWDLRNIKDKNSYIAEMPH-----------------EKPVNAAY-FNPTDSTKLLTTDQRNEIRVYSSYDWS 284 (383)
T ss_dssp TSEEEEEEGGGCCSTTCEEEEEEC-----------------SSCEEEEE-ECTTTSCEEEEEESSSEEEEEETTBTT
T ss_pred CCEEEEEeCCCCCcccceEEEecC-----------------CCceEEEE-EcCCCCCEEEEEcCCCcEEEEECCCCc
Confidence 88999998 2 222222221 01345677 466 77777777778899999987543
No 145
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.19 E-value=0.31 Score=47.30 Aligned_cols=62 Identities=16% Similarity=0.083 Sum_probs=40.3
Q ss_pred EcCCC-CEEEE-ECCCCEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEE
Q 014345 88 VDDRG-NIYIA-DTMNMAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIRE 163 (426)
Q Consensus 88 Vd~dG-~LYVA-Dt~N~rIrk~d-~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~ 163 (426)
++++| .||.+ |.....|.+++ +|+ ..++..+ ....|++ .++.||++|...+.|.+
T Consensus 230 ~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~~-------------------~~~~i~i--~~d~Iy~td~~~~~i~~ 288 (302)
T 3s25_A 230 YNVYGSLIFYQRGGDNPALCVVKNDGTGFKELAKG-------------------EFCNINV--TSQYVYFTDFVSNKEYC 288 (302)
T ss_dssp EEEETTEEEEEECSSSCEEEEEETTSCCCEEEEES-------------------CEEEEEE--CSSEEEEEETTTCCEEE
T ss_pred EEECCCEEEEEECCCCcEEEEEECCCCccEEeeCC-------------------ccceEEE--eCCEEEEEECCCCeEEE
Confidence 44444 47775 55567888888 666 3444321 0124553 56799999998888999
Q ss_pred EEcCCCc
Q 014345 164 IQLHFDD 170 (426)
Q Consensus 164 I~l~~~~ 170 (426)
+.+++..
T Consensus 289 ~~~dGs~ 295 (302)
T 3s25_A 289 TSTQNPD 295 (302)
T ss_dssp EESSSCC
T ss_pred EECCCCC
Confidence 9887644
No 146
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=95.07 E-value=2 Score=39.41 Aligned_cols=115 Identities=16% Similarity=0.114 Sum_probs=74.9
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
...+++++++|+++++-...+.|..++..... .+..+.+. -..-..+++.++++++++-..+
T Consensus 67 ~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~--~~~~~~~~----------------~~~v~~~~~~~~~~~l~s~~~d 128 (312)
T 4ery_A 67 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGK--CLKTLKGH----------------SNYVFCCNFNPQSNLIVSGSFD 128 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCC--EEEEEECC----------------SSCEEEEEECSSSSEEEEEETT
T ss_pred ceEEEEEcCCCCEEEEECCCCEEEEEECCCCc--EEEEEcCC----------------CCCEEEEEEcCCCCEEEEEeCC
Confidence 46789999999988887788899999876421 12233222 1123578888999888887778
Q ss_pred CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceE
Q 014345 102 MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCA 172 (426)
Q Consensus 102 ~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~ 172 (426)
+.|+.++ .+. +.++.+.. ..-..++ ..+++.++++-...+.|+.+++....+.
T Consensus 129 ~~i~iwd~~~~~~~~~~~~~~-----------------~~v~~~~-~~~~~~~l~~~~~d~~i~~wd~~~~~~~ 184 (312)
T 4ery_A 129 ESVRIWDVKTGKCLKTLPAHS-----------------DPVSAVH-FNRDGSLIVSSSYDGLCRIWDTASGQCL 184 (312)
T ss_dssp SCEEEEETTTCCEEEEECCCS-----------------SCEEEEE-ECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred CcEEEEECCCCEEEEEecCCC-----------------CcEEEEE-EcCCCCEEEEEeCCCcEEEEECCCCcee
Confidence 8899998 333 33332210 0124555 4667777676666788888888765543
No 147
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.05 E-value=0.098 Score=50.84 Aligned_cols=109 Identities=12% Similarity=0.100 Sum_probs=67.4
Q ss_pred EEEcCCC-cEEEEE---CCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 26 VEVLPGG-ELLILD---SANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 26 IaVd~dG-~LYVaD---~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
.++.++| .||++| ..+..|++++.+|+ ....+.... . .| +..+ .+.||.+|.+.
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs---~~~~lt~~~---------------~-~~--~~~~-g~~iy~t~~g~ 166 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRIDGE---EKKKIKNHY---------------L-FT--CNTS-DRYFYYNNPKN 166 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETTSC---CCEEEESSC---------------C-CC--SEEE-TTEEEEECTTT
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECCCC---CeEEEeCCC---------------c-eE--eeEE-CCEEEEEeCCC
Confidence 3455544 599998 67889999999974 234443221 0 12 1222 34799998888
Q ss_pred CEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCC-CeEEEEEcCCCceEeecC
Q 014345 102 MAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGN-RAIREIQLHFDDCAYQYG 176 (426)
Q Consensus 102 ~rIrk~d-~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN-~rIr~I~l~~~~~~~~~~ 176 (426)
..|.+++ +|+ ..++..+ +..+++++..+.||.+|+.+ ..|.++++++........
T Consensus 167 ~~Iy~~~l~g~~~~~l~~~--------------------~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~ 224 (302)
T 3s25_A 167 GQLYRYDTASQSEALFYDC--------------------NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTE 224 (302)
T ss_dssp CCEEEEETTTTEEEEEECS--------------------CEEEEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECSC
T ss_pred ceEEEEECCCCCEEEEeCC--------------------CccceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeC
Confidence 8899998 555 3444321 11122244577888888754 689899888766554433
No 148
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=94.89 E-value=1.2 Score=41.40 Aligned_cols=112 Identities=6% Similarity=0.050 Sum_probs=76.5
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
.-.+|+++|+|.++++-...+.|..++..... .+..+.+.. ..-..+++.++++++++-..+
T Consensus 15 ~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~--~~~~~~~~~----------------~~v~~~~~~~~~~~l~s~s~d 76 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTLYSGRVELWNYETQV--EVRSIQVTE----------------TPVRAGKFIARKNWIIVGSDD 76 (304)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTE--EEEEEECCS----------------SCEEEEEEEGGGTEEEEEETT
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCc--eeEEeeccC----------------CcEEEEEEeCCCCEEEEECCC
Confidence 57899999999988887788999999987421 223332221 012467888899988887788
Q ss_pred CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCC
Q 014345 102 MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFD 169 (426)
Q Consensus 102 ~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~ 169 (426)
+.|+.++ .+. +.++.+-. ..-..|+ +.+++.++++-...+.|+.+++...
T Consensus 77 ~~i~vwd~~~~~~~~~~~~h~-----------------~~v~~~~-~~~~~~~l~sgs~D~~v~lWd~~~~ 129 (304)
T 2ynn_A 77 FRIRVFNYNTGEKVVDFEAHP-----------------DYIRSIA-VHPTKPYVLSGSDDLTVKLWNWENN 129 (304)
T ss_dssp SEEEEEETTTCCEEEEEECCS-----------------SCEEEEE-ECSSSSEEEEEETTSCEEEEEGGGT
T ss_pred CEEEEEECCCCcEEEEEeCCC-----------------CcEEEEE-EcCCCCEEEEECCCCeEEEEECCCC
Confidence 9999999 344 34443311 1235666 5677777777777888998887654
No 149
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=94.77 E-value=0.87 Score=43.12 Aligned_cols=109 Identities=6% Similarity=0.071 Sum_probs=71.3
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
...+|++.++|+++++-...+.|..++.... ......... + .......++++++|.++++-..+
T Consensus 228 ~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~---~~~~~~~~~----~---------~~~~v~~~~~s~~g~~l~~g~~d 291 (340)
T 1got_B 228 DINAICFFPNGNAFATGSDDATCRLFDLRAD---QELMTYSHD----N---------IICGITSVSFSKSGRLLLAGYDD 291 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTT---EEEEEECCT----T---------CCSCEEEEEECTTSSEEEEEETT
T ss_pred CEEEEEEcCCCCEEEEEcCCCcEEEEECCCC---cEEEEEccC----C---------cccceEEEEECCCCCEEEEECCC
Confidence 4678999999998888878888999987632 211111110 0 01124678999999999888888
Q ss_pred CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEE
Q 014345 102 MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREI 164 (426)
Q Consensus 102 ~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I 164 (426)
+.|+.++ .+. +.++.|-. ..-.+|+ +.+++.++++-...+.|+.+
T Consensus 292 ~~i~vwd~~~~~~~~~~~~h~-----------------~~v~~~~-~s~dg~~l~s~s~D~~i~iW 339 (340)
T 1got_B 292 FNCNVWDALKADRAGVLAGHD-----------------NRVSCLG-VTDDGMAVATGSWDSFLKIW 339 (340)
T ss_dssp SEEEEEETTTCCEEEEEECCS-----------------SCEEEEE-ECTTSSCEEEEETTSCEEEE
T ss_pred CeEEEEEcccCcEeeEeecCC-----------------CcEEEEE-EcCCCCEEEEEcCCccEEec
Confidence 9999999 333 34454311 1234666 46777777766667777664
No 150
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=94.72 E-value=0.36 Score=46.71 Aligned_cols=116 Identities=9% Similarity=0.049 Sum_probs=71.3
Q ss_pred ceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCC-CEEEEECCC
Q 014345 23 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG-NIYIADTMN 101 (426)
Q Consensus 23 P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG-~LYVADt~N 101 (426)
-.+|++.++|+++++-...+.|..++..... .+..+.|. -..-..+++.+++ .++++-..+
T Consensus 130 V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~--~~~~~~~h----------------~~~V~~~~~~~~~~~~l~s~s~D 191 (344)
T 4gqb_B 130 VSTVSVLSSGTQAVSGSKDICIKVWDLAQQV--VLSSYRAH----------------AAQVTCVAASPHKDSVFLSCSED 191 (344)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCC----------------SSCEEEEEECSSCTTEEEEEETT
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCCc--EEEEEcCc----------------CCceEEEEecCCCCCceeeeccc
Confidence 5688899999988887778889999876421 12233221 1123578888877 477776667
Q ss_pred CEEEEEc--CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 014345 102 MAIRKIS--DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 171 (426)
Q Consensus 102 ~rIrk~d--~g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~ 171 (426)
+.|+.+| .+.. .++..... -.....+++...++.++++-..++.|+.+++....+
T Consensus 192 ~~v~iwd~~~~~~~~~~~~~~~---------------~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~ 249 (344)
T 4gqb_B 192 NRILLWDTRCPKPASQIGCSAP---------------GYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSC 249 (344)
T ss_dssp SCEEEEETTSSSCEEECC-------------------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--C
T ss_pred cccccccccccceeeeeeccee---------------eccceeeeecCCCCcceEEeccCCcEEEEECCCCcE
Confidence 8899988 3332 33321100 012456665445667777777778888888765444
No 151
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.56 E-value=0.56 Score=44.61 Aligned_cols=107 Identities=23% Similarity=0.260 Sum_probs=66.4
Q ss_pred eEEEEcCCCcEEEEECCCCeEEEEeCCCC----cccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEEC
Q 014345 24 YSVEVLPGGELLILDSANSNLYRISSSLS----LYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADT 99 (426)
Q Consensus 24 ~GIaVd~dG~LYVaD~~n~rI~kid~dg~----~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt 99 (426)
..+.+|++|.||++ .+++|+|+++..+ +.+. .+.+|.. + ...=.-|+++++|.||.++
T Consensus 91 ~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~-a~~vg~~-g-------------w~~~~~lff~p~G~Lyav~- 152 (236)
T 1tl2_A 91 QFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIAR-ATEVGSG-G-------------WSGFKFLFFHPNGYLYAVH- 152 (236)
T ss_dssp SEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHH-SEEEECS-S-------------GGGEEEEEECTTSCEEEEE-
T ss_pred eEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceecc-ccEeccC-C-------------CCceEEEEECCCceEEEEe-
Confidence 57899999999999 3589999988421 1111 1222221 1 1112679999999999999
Q ss_pred CCCEEEEEc-C-CC------cEEEeC-CccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 014345 100 MNMAIRKIS-D-SG------VTTIAG-GKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 168 (426)
Q Consensus 100 ~N~rIrk~d-~-g~------VstIaG-g~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~ 168 (426)
+.++.+-. . +. -.++.| +.+. .+ + -++ .+++++||.+. +++|.+.....
T Consensus 153 -dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~-------------~y--r-~l~-f~~~G~l~~v~--~g~~Y~~~~p~ 210 (236)
T 1tl2_A 153 -GQQFYKALPPVSNQDNWLARATKIGQGGWD-------------TF--K-FLF-FSSVGTLFGVQ--GGKFYEDYPPS 210 (236)
T ss_dssp -TTEEEEECCCSSTTCCHHHHCEEEESSSGG-------------GE--E-EEE-ECTTSCEEEEE--TTEEEEESCCC
T ss_pred -CCcEEecCCCCCCCcccccccceeccCCcc-------------eE--E-EEE-ECCCCcEEEEe--CCeEEecCCcc
Confidence 55675544 2 11 122322 2111 11 1 144 68999999999 78999887654
No 152
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=94.49 E-value=0.5 Score=44.07 Aligned_cols=117 Identities=8% Similarity=-0.046 Sum_probs=72.7
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
.-.+++++++|+++++-..++.|..++.++.....+..+.+. -.....|++.++|+++++-..+
T Consensus 10 ~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h----------------~~~v~~~~~~~~~~~l~~~~~d 73 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEH----------------NGQVTGVDWAPDSNRIVTCGTD 73 (372)
T ss_dssp CCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECC----------------SSCEEEEEEETTTTEEEEEETT
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCC----------------CCcccEEEEeCCCCEEEEEcCC
Confidence 457899999999888877788999998774210123333222 1125789999999877776667
Q ss_pred CEEEEEc--CCCcE-EEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCc
Q 014345 102 MAIRKIS--DSGVT-TIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDD 170 (426)
Q Consensus 102 ~rIrk~d--~g~Vs-tIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~ 170 (426)
+.|+.++ .+... .+.-... -.....++ +.+++.++++-..++.|+.+++....
T Consensus 74 g~i~vwd~~~~~~~~~~~~~~~---------------~~~v~~~~-~~~~~~~l~~~~~d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 74 RNAYVWTLKGRTWKPTLVILRI---------------NRAARCVR-WAPNEKKFAVGSGSRVISICYFEQEN 129 (372)
T ss_dssp SCEEEEEEETTEEEEEEECCCC---------------SSCEEEEE-ECTTSSEEEEEETTSSEEEEEEETTT
T ss_pred CeEEEEECCCCeeeeeEEeecC---------------CCceeEEE-ECCCCCEEEEEeCCCEEEEEEecCCC
Confidence 8888888 44322 2211100 01245666 45666665555567788887766543
No 153
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=94.46 E-value=0.71 Score=42.55 Aligned_cols=116 Identities=11% Similarity=0.050 Sum_probs=73.8
Q ss_pred CceEEEEcCC---CcEEEEECCCCeEEEEeCCCCccccc-EEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEE
Q 014345 22 EPYSVEVLPG---GELLILDSANSNLYRISSSLSLYSRP-KLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIA 97 (426)
Q Consensus 22 ~P~GIaVd~d---G~LYVaD~~n~rI~kid~dg~~~g~v-~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVA 97 (426)
.-.+|+++++ |+++++-..++.|..++.+... ..+ ..+.+. -.....|++.++|+++++
T Consensus 41 ~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~-~~~~~~~~~h----------------~~~v~~~~~~~~~~~l~s 103 (368)
T 3mmy_A 41 SIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG-QTIPKAQQMH----------------TGPVLDVCWSDDGSKVFT 103 (368)
T ss_dssp CEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTS-CEEEEEEEEC----------------SSCEEEEEECTTSSEEEE
T ss_pred ceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCC-ceeEEEeccc----------------cCCEEEEEECcCCCEEEE
Confidence 4689999998 6877777778888888876311 111 223222 112568999999987777
Q ss_pred ECCCCEEEEEc-C-CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEE-CCCCeEEEEECCCCeEEEEEcCCCce
Q 014345 98 DTMNMAIRKIS-D-SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYI-GSSCSLLVIDRGNRAIREIQLHFDDC 171 (426)
Q Consensus 98 Dt~N~rIrk~d-~-g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~v-d~~G~LYVaDsgN~rIr~I~l~~~~~ 171 (426)
-..++.|+.++ . +....+.+.. .....+++. .+++.++++-..++.|+.+++....+
T Consensus 104 ~~~dg~v~iwd~~~~~~~~~~~~~-----------------~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 163 (368)
T 3mmy_A 104 ASCDKTAKMWDLSSNQAIQIAQHD-----------------APVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNP 163 (368)
T ss_dssp EETTSEEEEEETTTTEEEEEEECS-----------------SCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSC
T ss_pred EcCCCcEEEEEcCCCCceeecccc-----------------CceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcE
Confidence 67788999999 3 3333333210 123455531 66777777766678888888765443
No 154
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=94.38 E-value=1.4 Score=42.10 Aligned_cols=131 Identities=17% Similarity=0.202 Sum_probs=77.1
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
...+++++++|.++++-..++.|..++..... .+..+.+. -.....|++.++|.++++-..+
T Consensus 141 ~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~--~~~~~~~h----------------~~~v~~~~~~~~~~~l~s~~~d 202 (420)
T 3vl1_A 141 EITKLKFFPSGEALISSSQDMQLKIWSVKDGS--NPRTLIGH----------------RATVTDIAIIDRGRNVLSASLD 202 (420)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCC--CCEEEECC----------------SSCEEEEEEETTTTEEEEEETT
T ss_pred ccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc--CceEEcCC----------------CCcEEEEEEcCCCCEEEEEcCC
Confidence 56789999999877777778899999876421 23333322 1124678999999877776677
Q ss_pred CEEEEEc--CCC-cEEEeCCccCCCCCCC--------CCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCc
Q 014345 102 MAIRKIS--DSG-VTTIAGGKWGRGGGHV--------DGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDD 170 (426)
Q Consensus 102 ~rIrk~d--~g~-VstIaGg~~g~~~G~~--------dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~ 170 (426)
+.|+.++ .+. +.++.+..... .... ..............++ +.+++.++++-..++.|+.+++....
T Consensus 203 ~~v~iwd~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~v~~~~-~s~~~~~l~~~~~dg~i~i~d~~~~~ 280 (420)
T 3vl1_A 203 GTIRLWECGTGTTIHTFNRKENPH-DGVNSIALFVGTDRQLHEISTSKKNNLE-FGTYGKYVIAGHVSGVITVHNVFSKE 280 (420)
T ss_dssp SCEEEEETTTTEEEEEECBTTBTT-CCEEEEEEEECCCSSCGGGCCCCCCTTC-SSCTTEEEEEEETTSCEEEEETTTCC
T ss_pred CcEEEeECCCCceeEEeecCCCCC-CCccEEEEecCCcceeeecccCcccceE-EcCCCCEEEEEcCCCeEEEEECCCCc
Confidence 8888888 333 33443211000 0000 0000000112334455 46778777777778889988887654
Q ss_pred eE
Q 014345 171 CA 172 (426)
Q Consensus 171 ~~ 172 (426)
..
T Consensus 281 ~~ 282 (420)
T 3vl1_A 281 QT 282 (420)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 155
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=94.32 E-value=3.3 Score=39.71 Aligned_cols=117 Identities=12% Similarity=0.112 Sum_probs=73.7
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEE---
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIAD--- 98 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVAD--- 98 (426)
...+++++++|+++++-...+.|..++... +........ +..+ ..+..+++.++|.++++-
T Consensus 178 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~---~~~~~~~~~--~~~~-----------~~~~~~~~~~~~~~l~~g~~~ 241 (402)
T 2aq5_A 178 TIYSVDWSRDGALICTSCRDKRVRVIEPRK---GTVVAEKDR--PHEG-----------TRPVHAVFVSEGKILTTGFSR 241 (402)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEEETTT---TEEEEEEEC--SSCS-----------SSCCEEEECSTTEEEEEEECT
T ss_pred ceEEEEECCCCCEEEEEecCCcEEEEeCCC---Cceeeeecc--CCCC-----------CcceEEEEcCCCcEEEEeccC
Confidence 568899999998777766788999998864 222222101 0000 125778999999888876
Q ss_pred CCCCEEEEEc-C-CC--cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCc
Q 014345 99 TMNMAIRKIS-D-SG--VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDD 170 (426)
Q Consensus 99 t~N~rIrk~d-~-g~--VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~ 170 (426)
..++.|+.++ . +. +....... -.....+++..+...|+++...++.|+.+++....
T Consensus 242 ~~d~~i~iwd~~~~~~~~~~~~~~~----------------~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 242 MSERQVALWDTKHLEEPLSLQELDT----------------SSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp TCCEEEEEEETTBCSSCSEEEECCC----------------CSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred CCCceEEEEcCccccCCceEEeccC----------------CCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 5688899998 2 22 22222110 01245667544444667788778899999987654
No 156
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.31 E-value=0.9 Score=48.72 Aligned_cols=119 Identities=10% Similarity=-0.004 Sum_probs=76.0
Q ss_pred CCceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECC
Q 014345 21 IEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 100 (426)
Q Consensus 21 ~~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~ 100 (426)
....+|+.|++|+|||+-..+ -|.+++.++ +.+..+.. . ++. .-+....|+.|++|+|||+-.
T Consensus 495 ~~i~~i~~d~~g~lWigt~~~-Gl~~~~~~~---~~~~~~~~-~-------~~l----~~~~i~~i~~d~~g~lWi~T~- 557 (781)
T 3v9f_A 495 NFVRSIAQDSEGRFWIGTFGG-GVGIYTPDM---QLVRKFNQ-Y-------EGF----CSNTINQIYRSSKGQMWLATG- 557 (781)
T ss_dssp SCEEEEEECTTCCEEEEESSS-CEEEECTTC---CEEEEECT-T-------TTC----SCSCEEEEEECTTSCEEEEET-
T ss_pred ceeEEEEEcCCCCEEEEEcCC-CEEEEeCCC---CeEEEccC-C-------CCC----CCCeeEEEEECCCCCEEEEEC-
Confidence 357899999999999997533 488898874 23333321 1 111 023457899999999999976
Q ss_pred CCEEEEEc-C-CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceE
Q 014345 101 NMAIRKIS-D-SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCA 172 (426)
Q Consensus 101 N~rIrk~d-~-g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~ 172 (426)
++-|.+++ . +.+..+ ... +|.... ...+|+ .|.+|+|||+- ++-|.++++......
T Consensus 558 ~Glv~~~d~~~~~~~~~-~~~--------~gl~~~----~i~~i~-~d~~g~lW~~t--~~Gl~~~~~~~~~~~ 615 (781)
T 3v9f_A 558 EGLVCFPSARNFDYQVF-QRK--------EGLPNT----HIRAIS-EDKNGNIWAST--NTGISCYITSKKCFY 615 (781)
T ss_dssp TEEEEESCTTTCCCEEE-CGG--------GTCSCC----CCCEEE-ECSSSCEEEEC--SSCEEEEETTTTEEE
T ss_pred CCceEEECCCCCcEEEc-ccc--------CCCCCc----eEEEEE-ECCCCCEEEEc--CCceEEEECCCCceE
Confidence 44448888 3 334433 211 111111 235776 78999999996 455899998866554
No 157
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=94.29 E-value=0.99 Score=43.43 Aligned_cols=118 Identities=9% Similarity=0.067 Sum_probs=72.7
Q ss_pred CceEEEEcC-CCcEEEEECCCCeEEEEeCCCCcc-----cccEEEecCCCCcccccCCcccccccCCcceEEEcCCC-CE
Q 014345 22 EPYSVEVLP-GGELLILDSANSNLYRISSSLSLY-----SRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG-NI 94 (426)
Q Consensus 22 ~P~GIaVd~-dG~LYVaD~~n~rI~kid~dg~~~-----g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG-~L 94 (426)
...++++++ +++++++-...+.|..++...... ..+..+.+. -.....|++.++| ++
T Consensus 83 ~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h----------------~~~v~~~~~~p~~~~~ 146 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGH----------------TKRVGIVAWHPTAQNV 146 (402)
T ss_dssp CEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECC----------------SSCEEEEEECSSBTTE
T ss_pred CEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCC----------------CCeEEEEEECcCCCCE
Confidence 357889998 888888777788888888764210 012222222 1235689999987 67
Q ss_pred EEEECCCCEEEEEc--CCC-cEEEe-CCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCc
Q 014345 95 YIADTMNMAIRKIS--DSG-VTTIA-GGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDD 170 (426)
Q Consensus 95 YVADt~N~rIrk~d--~g~-VstIa-Gg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~ 170 (426)
+++-..++.|+.++ .+. +.++. ... -.....|+ +.+++.++++-..++.|+.+++....
T Consensus 147 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~----------------~~~v~~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~ 209 (402)
T 2aq5_A 147 LLSAGCDNVILVWDVGTGAAVLTLGPDVH----------------PDTIYSVD-WSRDGALICTSCRDKRVRVIEPRKGT 209 (402)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECTTTC----------------CSCEEEEE-ECTTSSCEEEEETTSEEEEEETTTTE
T ss_pred EEEEcCCCEEEEEECCCCCccEEEecCCC----------------CCceEEEE-ECCCCCEEEEEecCCcEEEEeCCCCc
Confidence 77766678899988 333 23331 110 01235666 45566666655567788888877655
Q ss_pred eE
Q 014345 171 CA 172 (426)
Q Consensus 171 ~~ 172 (426)
+.
T Consensus 210 ~~ 211 (402)
T 2aq5_A 210 VV 211 (402)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 158
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.26 E-value=2.2 Score=41.01 Aligned_cols=122 Identities=11% Similarity=0.067 Sum_probs=72.6
Q ss_pred ceEEEEcC-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 23 PYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 23 P~GIaVd~-dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
...+++.+ +++++++-...+.|..++..... ..+..+.|. -..-..|++.++|..+++-..+
T Consensus 208 v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~-~~~~~~~~h----------------~~~v~~v~~~p~~~~l~s~s~D 270 (380)
T 3iz6_a 208 VLSLSINSLNANMFISGSCDTTVRLWDLRITS-RAVRTYHGH----------------EGDINSVKFFPDGQRFGTGSDD 270 (380)
T ss_dssp EEEEEECSSSCCEEEEEETTSCEEEEETTTTC-CCCEEECCC----------------SSCCCEEEECTTSSEEEEECSS
T ss_pred eEEEEeecCCCCEEEEEECCCeEEEEECCCCC-cceEEECCc----------------CCCeEEEEEecCCCeEEEEcCC
Confidence 34455544 55666666566666666654110 112222221 1124689999999999998888
Q ss_pred CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceE
Q 014345 102 MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCA 172 (426)
Q Consensus 102 ~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~ 172 (426)
+.|+.+| .+. +.++..... . ..........++ +.++|.++++-..++.|+.++.....+.
T Consensus 271 ~~i~lwd~~~~~~~~~~~~~~~-~---------~~~~~~~v~~~~-~s~~g~~l~~g~~dg~i~vwd~~~~~~~ 333 (380)
T 3iz6_a 271 GTCRLFDMRTGHQLQVYNREPD-R---------NDNELPIVTSVA-FSISGRLLFAGYSNGDCYVWDTLLAEMV 333 (380)
T ss_dssp SCEEEEETTTTEEEEEECCCCS-S---------SCCSSCSCSEEE-ECSSSSEEEEECTTSCEEEEETTTCCEE
T ss_pred CeEEEEECCCCcEEEEeccccc-c---------cccccCceEEEE-ECCCCCEEEEEECCCCEEEEECCCCceE
Confidence 9999999 333 333322110 0 011222346777 5788888888888999999997655443
No 159
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=94.23 E-value=0.74 Score=45.10 Aligned_cols=115 Identities=14% Similarity=0.126 Sum_probs=74.9
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
.-.+|+++++|.++++-...+.|..++..+.. .+..+. |+ -..-..|++.++|+.+++-..+
T Consensus 152 ~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~--~~~~~~-------~h---------~~~V~~v~~~p~~~~l~s~s~D 213 (410)
T 1vyh_C 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFE--CIRTMH-------GH---------DHNVSSVSIMPNGDHIVSASRD 213 (410)
T ss_dssp CEEEEEECTTSSEEEEEETTSCCCEEETTSSC--EEECCC-------CC---------SSCEEEEEECSSSSEEEEEETT
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc--eeEEEc-------CC---------CCCEEEEEEeCCCCEEEEEeCC
Confidence 35678888888877777777778777775321 111111 11 1124678999999988887788
Q ss_pred CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceE
Q 014345 102 MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCA 172 (426)
Q Consensus 102 ~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~ 172 (426)
+.|+.++ .+. +.++.+.. ..-..++ ..+++.++++-...+.|+.+++....+.
T Consensus 214 ~~i~~wd~~~~~~~~~~~~h~-----------------~~v~~~~-~~~~g~~l~s~s~D~~v~vwd~~~~~~~ 269 (410)
T 1vyh_C 214 KTIKMWEVQTGYCVKTFTGHR-----------------EWVRMVR-PNQDGTLIASCSNDQTVRVWVVATKECK 269 (410)
T ss_dssp SEEEEEETTTCCEEEEEECCS-----------------SCEEEEE-ECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred CeEEEEECCCCcEEEEEeCCC-----------------ccEEEEE-ECCCCCEEEEEcCCCeEEEEECCCCcee
Confidence 9999999 343 44554321 0123455 5677888887777889999988765543
No 160
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=94.15 E-value=2.4 Score=38.89 Aligned_cols=110 Identities=13% Similarity=0.035 Sum_probs=68.7
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
...+++++++|.++++-..++.|..++..... .+..+... .....++++++|..+++-...
T Consensus 220 ~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~~~-----------------~~~~~~~~~~~~~~l~~~~~~ 280 (369)
T 3zwl_B 220 SISDMQFSPDLTYFITSSRDTNSFLVDVSTLQ--VLKKYETD-----------------CPLNTAVITPLKEFIILGGGQ 280 (369)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCC--EEEEEECS-----------------SCEEEEEECSSSSEEEEEECC
T ss_pred ceeEEEECCCCCEEEEecCCceEEEEECCCCc--eeeeecCC-----------------CCceeEEecCCCceEEEeecC
Confidence 46789999999877777778899999886421 12222111 124578888888766554444
Q ss_pred C--------------EEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEE
Q 014345 102 M--------------AIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREI 164 (426)
Q Consensus 102 ~--------------rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I 164 (426)
+ .|+.++ .+. +.++.+. -.....++ +.+++.++++-...+.|+.+
T Consensus 281 ~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-----------------~~~v~~~~-~s~~~~~l~s~~~dg~v~iw 342 (369)
T 3zwl_B 281 EAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGH-----------------FGPLNTVA-ISPQGTSYASGGEDGFIRLH 342 (369)
T ss_dssp C-------------CEEEEEETTTCCEEEEEECC-----------------SSCEEEEE-ECTTSSEEEEEETTSEEEEE
T ss_pred CCceEEEEecCCCcceeEEEecCCCcchhheecc-----------------cCcEEEEE-ECCCCCEEEEEcCCCeEEEE
Confidence 3 566666 222 2333221 11345677 56778777777778899988
Q ss_pred EcCC
Q 014345 165 QLHF 168 (426)
Q Consensus 165 ~l~~ 168 (426)
++..
T Consensus 343 ~~~~ 346 (369)
T 3zwl_B 343 HFEK 346 (369)
T ss_dssp EECH
T ss_pred ECcc
Confidence 8764
No 161
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=94.01 E-value=1.1 Score=42.41 Aligned_cols=139 Identities=16% Similarity=0.074 Sum_probs=76.6
Q ss_pred CceEEEEcCCCcEEEEECCC---CeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEE
Q 014345 22 EPYSVEVLPGGELLILDSAN---SNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIAD 98 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n---~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVAD 98 (426)
...+++++++|.++++-... +.|..++..... .+..+.+......-. -+ ..+.-.....|+++++|.++++-
T Consensus 235 ~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~--~~~~~~~~~~~~~~~-~~--~~~~~~~v~~~~~~~~~~~l~~~ 309 (397)
T 1sq9_A 235 SIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE--RIGSLSVPTHSSQAS-LG--EFAHSSWVMSLSFNDSGETLCSA 309 (397)
T ss_dssp CEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC--EEEEECBC---------C--CBSBSSCEEEEEECSSSSEEEEE
T ss_pred ccceEEECCCCCEEEEEecCCCCceEEEEECCCCc--ccceeccCccccccc-cc--ccccCCcEEEEEECCCCCEEEEE
Confidence 57899999999977776666 789999876321 223332210000000 00 00011235689999999988887
Q ss_pred CCCCEEEEEc--CCC-cEEEeCCccCCCCCC----CCCCc--ccccCCCCCeeEEECCCC----------eEEEEECCCC
Q 014345 99 TMNMAIRKIS--DSG-VTTIAGGKWGRGGGH----VDGPS--EDAKFSNDFDVVYIGSSC----------SLLVIDRGNR 159 (426)
Q Consensus 99 t~N~rIrk~d--~g~-VstIaGg~~g~~~G~----~dG~~--~~a~f~~P~gIa~vd~~G----------~LYVaDsgN~ 159 (426)
..++.|+.++ .+. +.++...... .++ ..|.. ....-.....+++ .+++ .++++-..++
T Consensus 310 ~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~v~~~~~-~~~g~~~~~~~~~~~~l~s~~~dg 386 (397)
T 1sq9_A 310 GWDGKLRFWDVKTKERITTLNMHCDD--IEIEEDILAVDEHGDSLAEPGVFDVKF-LKKGWRSGMGADLNESLCCVCLDR 386 (397)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCGGG--CSSGGGCCCBCTTSCBCSSCCEEEEEE-ECTTTSBSTTCTTSCEEEEEETTT
T ss_pred eCCCeEEEEEcCCCceeEEEecccCc--ccchhhhhccccccccccCCceeEEEe-ccccccccccccccceEEEecCCC
Confidence 7889999999 333 4455411000 000 00000 0000123467774 5665 6777766788
Q ss_pred eEEEEEcCC
Q 014345 160 AIREIQLHF 168 (426)
Q Consensus 160 rIr~I~l~~ 168 (426)
.|+.+++..
T Consensus 387 ~i~iw~~~~ 395 (397)
T 1sq9_A 387 SIRWFREAG 395 (397)
T ss_dssp EEEEEEEEC
T ss_pred cEEEEEcCC
Confidence 999888653
No 162
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=94.00 E-value=1.4 Score=42.09 Aligned_cols=109 Identities=11% Similarity=0.130 Sum_probs=69.1
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
.-.++++.++|+++++-...+.|+.++.... ......... ........+++.++|.+.++-..+
T Consensus 242 ~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~---~~~~~~~~~-------------~~~~~~~~~~~s~~g~~l~~g~~d 305 (354)
T 2pbi_B 242 DVNSVRYYPSGDAFASGSDDATCRLYDLRAD---REVAIYSKE-------------SIIFGASSVDFSLSGRLLFAGYND 305 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTT---EEEEEECCT-------------TCCSCEEEEEECTTSSEEEEEETT
T ss_pred CeEEEEEeCCCCEEEEEeCCCeEEEEECCCC---cEEEEEcCC-------------CcccceeEEEEeCCCCEEEEEECC
Confidence 3567888888887777777778888877532 111111110 001224578999999988887778
Q ss_pred CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEE
Q 014345 102 MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREI 164 (426)
Q Consensus 102 ~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I 164 (426)
+.|+.++ .+. +.++.+-. .....|+ +.++|.++++-...+.|+.+
T Consensus 306 ~~i~vwd~~~~~~~~~l~~h~-----------------~~v~~l~-~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 306 YTINVWDVLKGSRVSILFGHE-----------------NRVSTLR-VSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp SCEEEEETTTCSEEEEECCCS-----------------SCEEEEE-ECTTSSCEEEEETTSEEEEE
T ss_pred CcEEEEECCCCceEEEEECCC-----------------CcEEEEE-ECCCCCEEEEEcCCCCEEec
Confidence 8899998 444 44443310 1245677 57788777777677888765
No 163
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=93.93 E-value=1 Score=43.68 Aligned_cols=113 Identities=12% Similarity=0.041 Sum_probs=73.9
Q ss_pred ceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCCC
Q 014345 23 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 102 (426)
Q Consensus 23 P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N~ 102 (426)
-.+++++++|.++++-...+.|..++..... .+..+.|. -..-..|++.++|..+++-..++
T Consensus 126 v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~--~~~~~~~h----------------~~~v~~~~~~p~~~~l~s~s~d~ 187 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDRLIRIWDIENRK--IVMILQGH----------------EQDIYSLDYFPSGDKLVSGSGDR 187 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCC----------------SSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCc--EEEEEccC----------------CCCEEEEEEcCCCCEEEEecCCC
Confidence 4689999999988887788899999987421 12222222 11246789999999888877889
Q ss_pred EEEEEc-C-CCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 014345 103 AIRKIS-D-SGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 171 (426)
Q Consensus 103 rIrk~d-~-g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~ 171 (426)
.|+.++ . +.. .++... .....+++...++.++++-..++.|+.+++....+
T Consensus 188 ~v~iwd~~~~~~~~~~~~~------------------~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~ 241 (393)
T 1erj_A 188 TVRIWDLRTGQCSLTLSIE------------------DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL 241 (393)
T ss_dssp EEEEEETTTTEEEEEEECS------------------SCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCE
T ss_pred cEEEEECCCCeeEEEEEcC------------------CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 999998 3 332 222211 01344554333777777777778888888765443
No 164
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=93.89 E-value=2.3 Score=39.07 Aligned_cols=123 Identities=11% Similarity=-0.028 Sum_probs=69.8
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
...+++++++|+++++-...+.|..++.... ........ -.....++++++|..+++-..+
T Consensus 76 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~----------------~~~v~~~~~~~~~~~l~~~~~~ 136 (369)
T 3zwl_B 76 TIWSIDVDCFTKYCVTGSADYSIKLWDVSNG---QCVATWKS----------------PVPVKRVEFSPCGNYFLAILDN 136 (369)
T ss_dssp CEEEEEECTTSSEEEEEETTTEEEEEETTTC---CEEEEEEC----------------SSCEEEEEECTTSSEEEEEECC
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---cEEEEeec----------------CCCeEEEEEccCCCEEEEecCC
Confidence 4678889988887777777888988887642 22222111 1125789999999877776666
Q ss_pred -----CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 014345 102 -----MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 168 (426)
Q Consensus 102 -----~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~ 168 (426)
+.|+.++ .+. ...+....... ... ............++ +.+++.++++-..++.|+.+++..
T Consensus 137 ~~~~~g~i~~~d~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~-~~~~~~~l~~~~~dg~i~i~d~~~ 206 (369)
T 3zwl_B 137 VMKNPGSINIYEIERDSATHELTKVSEEP-IHK---IITHEGLDAATVAG-WSTKGKYIIAGHKDGKISKYDVSN 206 (369)
T ss_dssp BTTBCCEEEEEEEEECTTTCCEEEECSSC-SEE---EECCTTCCCEEEEE-ECGGGCEEEEEETTSEEEEEETTT
T ss_pred ccCCCCEEEEEEecCCccceeecccccce-eee---ccCCcCccceeEEE-EcCCCCEEEEEcCCCEEEEEECCC
Confidence 7888887 222 21111100000 000 00000011345566 456666666555678888888775
No 165
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=93.83 E-value=0.58 Score=45.85 Aligned_cols=115 Identities=14% Similarity=0.182 Sum_probs=76.9
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
....+++.+++.++++-...+.|..++..... ...++.|. -..-..|+++++|+++++-..+
T Consensus 110 ~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~--~~~~l~~h----------------~~~V~~v~~~~~~~~l~sgs~D 171 (410)
T 1vyh_C 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGD--FERTLKGH----------------TDSVQDISFDHSGKLLASCSAD 171 (410)
T ss_dssp CEEEEEECSSSSEEEEEESSSCEEEEETTTCC--CCEEECCC----------------SSCEEEEEECTTSSEEEEEETT
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--EEEEEecc----------------CCcEEEEEEcCCCCEEEEEeCC
Confidence 35689999999998888888999999987421 12333222 1124679999999988887778
Q ss_pred CEEEEEc-CC-C-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceE
Q 014345 102 MAIRKIS-DS-G-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCA 172 (426)
Q Consensus 102 ~rIrk~d-~g-~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~ 172 (426)
+.|+.++ .+ . +.++.+- . ..-..++ +.+++.++++-...+.|+.+++....+.
T Consensus 172 ~~i~iwd~~~~~~~~~~~~h--------~---------~~V~~v~-~~p~~~~l~s~s~D~~i~~wd~~~~~~~ 227 (410)
T 1vyh_C 172 MTIKLWDFQGFECIRTMHGH--------D---------HNVSSVS-IMPNGDHIVSASRDKTIKMWEVQTGYCV 227 (410)
T ss_dssp SCCCEEETTSSCEEECCCCC--------S---------SCEEEEE-ECSSSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CeEEEEeCCCCceeEEEcCC--------C---------CCEEEEE-EeCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 8888888 32 2 2222221 0 1234566 4667777777777888998888766553
No 166
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=93.73 E-value=1 Score=48.32 Aligned_cols=120 Identities=9% Similarity=0.011 Sum_probs=75.4
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
...+|+.|++|.|||+-. +.|.+++..+. ....+.... . .+ ...+...+|+.|++|+|||+-.++
T Consensus 451 ~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~---~~~~~~~~~-~-----~~----~~~~~i~~i~~d~~g~lWigt~~~ 515 (781)
T 3v9f_A 451 DVRVFYEDKNKKIWIGTH--AGVFVIDLASK---KVIHHYDTS-N-----SQ----LLENFVRSIAQDSEGRFWIGTFGG 515 (781)
T ss_dssp CEEEEEECTTSEEEEEET--TEEEEEESSSS---SCCEEECTT-T-----SS----CSCSCEEEEEECTTCCEEEEESSS
T ss_pred eEEEEEECCCCCEEEEEC--CceEEEeCCCC---eEEecccCc-c-----cc----cccceeEEEEEcCCCCEEEEEcCC
Confidence 567889999999999875 57999988742 333332110 0 00 012457789999999999997644
Q ss_pred CEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceE
Q 014345 102 MAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCA 172 (426)
Q Consensus 102 ~rIrk~d-~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~ 172 (426)
+ |.+++ +.+ +..+.. . .+.. -....+|+ .|.+|.|||+-. ++.|.+++.......
T Consensus 516 G-l~~~~~~~~~~~~~~~-~--------~~l~----~~~i~~i~-~d~~g~lWi~T~-~Glv~~~d~~~~~~~ 572 (781)
T 3v9f_A 516 G-VGIYTPDMQLVRKFNQ-Y--------EGFC----SNTINQIY-RSSKGQMWLATG-EGLVCFPSARNFDYQ 572 (781)
T ss_dssp C-EEEECTTCCEEEEECT-T--------TTCS----CSCEEEEE-ECTTSCEEEEET-TEEEEESCTTTCCCE
T ss_pred C-EEEEeCCCCeEEEccC-C--------CCCC----CCeeEEEE-ECCCCCEEEEEC-CCceEEECCCCCcEE
Confidence 4 77788 333 443321 0 0110 12345666 789999999986 454488887765443
No 167
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=93.70 E-value=2.4 Score=39.90 Aligned_cols=133 Identities=11% Similarity=0.019 Sum_probs=77.4
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
...++++.++| ++++-..++.|..++..... .+..+.+. .++.. .-.....|+++++|.++++-..+
T Consensus 188 ~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~--~~~~~~~~----~~h~~------~~~~i~~i~~~~~~~~l~~~~~d 254 (397)
T 1sq9_A 188 FATSVDISERG-LIATGFNNGTVQISELSTLR--PLYNFESQ----HSMIN------NSNSIRSVKFSPQGSLLAIAHDS 254 (397)
T ss_dssp CCCEEEECTTS-EEEEECTTSEEEEEETTTTE--EEEEEECC----C---C------CCCCEEEEEECSSTTEEEEEEEE
T ss_pred CceEEEECCCc-eEEEEeCCCcEEEEECCCCc--eeEEEecc----ccccc------cCCccceEEECCCCCEEEEEecC
Confidence 57899999999 88888888999999987421 12223220 00000 01125789999999987776666
Q ss_pred ---CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceE
Q 014345 102 ---MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCA 172 (426)
Q Consensus 102 ---~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~ 172 (426)
+.|+.++ .+. +.++.+..... ...... -+.-.....++ +.+++.++++-..++.|+.+++....+.
T Consensus 255 ~~~g~i~i~d~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~v~~~~-~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 326 (397)
T 1sq9_A 255 NSFGCITLYETEFGERIGSLSVPTHSS-QASLGE---FAHSSWVMSLS-FNDSGETLCSAGWDGKLRFWDVKTKERI 326 (397)
T ss_dssp TTEEEEEEEETTTCCEEEEECBC---------CC---BSBSSCEEEEE-ECSSSSEEEEEETTSEEEEEETTTTEEE
T ss_pred CCCceEEEEECCCCcccceeccCcccc-cccccc---cccCCcEEEEE-ECCCCCEEEEEeCCCeEEEEEcCCCcee
Confidence 7899999 344 34443310000 000000 00112345666 4667777777667888999988765543
No 168
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=93.60 E-value=3.3 Score=38.36 Aligned_cols=112 Identities=8% Similarity=0.084 Sum_probs=71.4
Q ss_pred ceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCCC
Q 014345 23 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 102 (426)
Q Consensus 23 P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N~ 102 (426)
-..+++.++|+++++-...+.|..++..... .+..+.+.. ..-..|++.+++.++++-..++
T Consensus 58 v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~--~~~~~~~h~----------------~~v~~~~~~~~~~~l~sgs~D~ 119 (304)
T 2ynn_A 58 VRAGKFIARKNWIIVGSDDFRIRVFNYNTGE--KVVDFEAHP----------------DYIRSIAVHPTKPYVLSGSDDL 119 (304)
T ss_dssp EEEEEEEGGGTEEEEEETTSEEEEEETTTCC--EEEEEECCS----------------SCEEEEEECSSSSEEEEEETTS
T ss_pred EEEEEEeCCCCEEEEECCCCEEEEEECCCCc--EEEEEeCCC----------------CcEEEEEEcCCCCEEEEECCCC
Confidence 4567788888877777778888888876421 222332221 1246799999999888877788
Q ss_pred EEEEEc-CCC--c-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCC
Q 014345 103 AIRKIS-DSG--V-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFD 169 (426)
Q Consensus 103 rIrk~d-~g~--V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~ 169 (426)
.|+.++ ..+ . .++.+.. ..-..+++.+.++.++++-...+.|+.+++...
T Consensus 120 ~v~lWd~~~~~~~~~~~~~h~-----------------~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~ 173 (304)
T 2ynn_A 120 TVKLWNWENNWALEQTFEGHE-----------------HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS 173 (304)
T ss_dssp CEEEEEGGGTTEEEEEECCCC-----------------SCEEEEEECTTCTTEEEEEETTSEEEEEETTCS
T ss_pred eEEEEECCCCcchhhhhcccC-----------------CcEEEEEECCCCCCEEEEEeCCCeEEEEECCCC
Confidence 899998 322 2 2332210 123456643335677777777788888887543
No 169
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=93.47 E-value=3 Score=38.04 Aligned_cols=118 Identities=14% Similarity=0.075 Sum_probs=69.7
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
...+|+++++|+++++-...+.|..++..... .+..+.+. .....+++.+++.++++-. +
T Consensus 217 ~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~--~~~~~~~~-----------------~~v~~~~~~~~~~~~~~~~-d 276 (340)
T 4aow_A 217 YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGG-----------------DIINALCFSPNRYWLCAAT-G 276 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEETTTTE--EEEEEECS-----------------SCEEEEEECSSSSEEEEEE-T
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEEeccCc--eeeeecCC-----------------ceEEeeecCCCCceeeccC-C
Confidence 45788899999888877778888888876421 12222211 1235677777777665543 6
Q ss_pred CEEEEEc-CCC--cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 014345 102 MAIRKIS-DSG--VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 168 (426)
Q Consensus 102 ~rIrk~d-~g~--VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~ 168 (426)
+.|+.++ .+. +..+....... .....-..-..|+ +.++|.++++-..++.|+.+++..
T Consensus 277 ~~i~iwd~~~~~~~~~~~~~~~~~--------~~~~h~~~v~~l~-~s~dg~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 277 PSIKIWDLEGKIIVDELKQEVIST--------SSKAEPPQCTSLA-WSADGQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp TEEEEEETTTTEEEEEECCC---------------CCCCCEEEEE-ECTTSSEEEEEETTSCEEEEEEEC
T ss_pred CEEEEEECCCCeEEEeccccceee--------eccCCCCCEEEEE-ECCCCCEEEEEeCCCEEEEEeCCC
Confidence 7888888 433 22332211000 0001112235677 577888888777788999888654
No 170
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=93.47 E-value=1.5 Score=40.77 Aligned_cols=113 Identities=10% Similarity=-0.034 Sum_probs=68.2
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
...+++++++|+++++-...+.|..++... +......-. .++ -.....+++.++|+++++-..+
T Consensus 54 ~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~---~~~~~~~~~----~~~---------~~~v~~~~~~~~~~~l~~~~~d 117 (372)
T 1k8k_C 54 QVTGVDWAPDSNRIVTCGTDRNAYVWTLKG---RTWKPTLVI----LRI---------NRAARCVRWAPNEKKFAVGSGS 117 (372)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEEEET---TEEEEEEEC----CCC---------SSCEEEEEECTTSSEEEEEETT
T ss_pred cccEEEEeCCCCEEEEEcCCCeEEEEECCC---CeeeeeEEe----ecC---------CCceeEEEECCCCCEEEEEeCC
Confidence 467899999888777766777888887653 221111100 000 1135789999999877666667
Q ss_pred CEEEEEc--CCCc----EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 014345 102 MAIRKIS--DSGV----TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 167 (426)
Q Consensus 102 ~rIrk~d--~g~V----stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~ 167 (426)
+.|+.++ .+.. ..+... .-.....++ +.+++.++++-..++.|+.++..
T Consensus 118 ~~v~i~d~~~~~~~~~~~~~~~~----------------~~~~i~~~~-~~~~~~~l~~~~~dg~i~~~d~~ 172 (372)
T 1k8k_C 118 RVISICYFEQENDWWVCKHIKKP----------------IRSTVLSLD-WHPNSVLLAAGSCDFKCRIFSAY 172 (372)
T ss_dssp SSEEEEEEETTTTEEEEEEECTT----------------CCSCEEEEE-ECTTSSEEEEEETTSCEEEEECC
T ss_pred CEEEEEEecCCCcceeeeeeecc----------------cCCCeeEEE-EcCCCCEEEEEcCCCCEEEEEcc
Confidence 7777766 3331 222111 011345666 46677766666667888888853
No 171
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=93.38 E-value=1.3 Score=41.61 Aligned_cols=111 Identities=12% Similarity=-0.016 Sum_probs=72.1
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
....++++++|.++++-...+.|..++..... .+..+.+. -.....+++.++| ++++-..+
T Consensus 249 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~----------------~~~i~~~~~~~~~-~l~~~~~d 309 (425)
T 1r5m_A 249 PISVLEFNDTNKLLLSASDDGTLRIWHGGNGN--SQNCFYGH----------------SQSIVSASWVGDD-KVISCSMD 309 (425)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEECSSSBS--CSEEECCC----------------SSCEEEEEEETTT-EEEEEETT
T ss_pred ceEEEEECCCCCEEEEEcCCCEEEEEECCCCc--cceEecCC----------------CccEEEEEECCCC-EEEEEeCC
Confidence 45788999998877777778889888876321 12233211 1124688999988 66666678
Q ss_pred CEEEEEc-C-CC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCC
Q 014345 102 MAIRKIS-D-SG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFD 169 (426)
Q Consensus 102 ~rIrk~d-~-g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~ 169 (426)
+.|+.++ . +. +.++.+.. .....++ +.+++.++++-..++.|+.+++...
T Consensus 310 ~~i~i~d~~~~~~~~~~~~~~-----------------~~i~~~~-~s~~~~~l~~~~~dg~i~i~~~~~~ 362 (425)
T 1r5m_A 310 GSVRLWSLKQNTLLALSIVDG-----------------VPIFAGR-ISQDGQKYAVAFMDGQVNVYDLKKL 362 (425)
T ss_dssp SEEEEEETTTTEEEEEEECTT-----------------CCEEEEE-ECTTSSEEEEEETTSCEEEEECHHH
T ss_pred CcEEEEECCCCcEeEecccCC-----------------ccEEEEE-EcCCCCEEEEEECCCeEEEEECCCC
Confidence 8999999 3 33 23333210 1245666 5677777777667788999987643
No 172
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=93.37 E-value=2.8 Score=40.46 Aligned_cols=117 Identities=16% Similarity=0.223 Sum_probs=70.7
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC-CCCEEEEECC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIADTM 100 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~-dG~LYVADt~ 100 (426)
.-.++++.++|..+++-...+.|..++... +........ -.....+++.+ +|.++++-..
T Consensus 167 ~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~---~~~~~~~~~----------------~~~v~~~~~~~~~~~~l~~~s~ 227 (393)
T 1erj_A 167 DIYSLDYFPSGDKLVSGSGDRTVRIWDLRT---GQCSLTLSI----------------EDGVTTVAVSPGDGKYIAAGSL 227 (393)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTT---TEEEEEEEC----------------SSCEEEEEECSTTCCEEEEEET
T ss_pred CEEEEEEcCCCCEEEEecCCCcEEEEECCC---CeeEEEEEc----------------CCCcEEEEEECCCCCEEEEEcC
Confidence 356788888888777777778888888764 222222111 01245688887 7888888777
Q ss_pred CCEEEEEc--CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 014345 101 NMAIRKIS--DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 168 (426)
Q Consensus 101 N~rIrk~d--~g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~ 168 (426)
++.|+.++ .+.. ..+..... ...+ .-.....|+ +.+++.++++-...+.|+.+++..
T Consensus 228 d~~v~iwd~~~~~~~~~~~~~~~-~~~~---------h~~~v~~v~-~~~~g~~l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 228 DRAVRVWDSETGFLVERLDSENE-SGTG---------HKDSVYSVV-FTRDGQSVVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp TSCEEEEETTTCCEEEEEC-------CC---------CSSCEEEEE-ECTTSSEEEEEETTSEEEEEEC--
T ss_pred CCcEEEEECCCCcEEEeeccccc-CCCC---------CCCCEEEEE-ECCCCCEEEEEeCCCEEEEEECCC
Confidence 88899998 3332 33321100 0001 112345677 577787777777788999998764
No 173
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=93.36 E-value=1.3 Score=43.64 Aligned_cols=117 Identities=13% Similarity=0.124 Sum_probs=71.7
Q ss_pred CCceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccc--cEEEecCCCCcccccCCcccccccCCcceEEEcCC---CCEE
Q 014345 21 IEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSR--PKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR---GNIY 95 (426)
Q Consensus 21 ~~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~--v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~d---G~LY 95 (426)
..+.+|+++++|.++++-...+.|+.++........ ...+. ++ -.....|++.++ +.++
T Consensus 150 ~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~-------~h---------~~~v~~~~~sp~~~~~~~l 213 (450)
T 2vdu_B 150 KRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPIL-------GH---------VSMLTDVHLIKDSDGHQFI 213 (450)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSE-------EC---------SSCEEEEEEEECTTSCEEE
T ss_pred CCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeee-------cc---------cCceEEEEEcCCCCCCcEE
Confidence 357899999998865555567889888765321000 00111 11 223578999998 8766
Q ss_pred EEECCCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 014345 96 IADTMNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 171 (426)
Q Consensus 96 VADt~N~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~ 171 (426)
++-..++.|+.++ .+. +.++..+. -.....+++ . ++.++++-...+.|+.+++....+
T Consensus 214 ~s~~~d~~i~vwd~~~~~~~~~~~~~h----------------~~~v~~~~~-s-d~~~l~s~~~d~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 214 ITSDRDEHIKISHYPQCFIVDKWLFGH----------------KHFVSSICC-G-KDYLLLSAGGDDKIFAWDWKTGKN 274 (450)
T ss_dssp EEEETTSCEEEEEESCTTCEEEECCCC----------------SSCEEEEEE-C-STTEEEEEESSSEEEEEETTTCCE
T ss_pred EEEcCCCcEEEEECCCCceeeeeecCC----------------CCceEEEEE-C-CCCEEEEEeCCCeEEEEECCCCcE
Confidence 6655678888888 344 33332110 113466774 4 677777666788999998876543
No 174
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=93.32 E-value=0.9 Score=48.61 Aligned_cols=121 Identities=17% Similarity=0.188 Sum_probs=69.3
Q ss_pred cccCCcceEEEcC-CCCEEEEECCC---------------------CEEEEEc-CC---C-------cEEEeCCccCCCC
Q 014345 78 ARMNHPKGLTVDD-RGNIYIADTMN---------------------MAIRKIS-DS---G-------VTTIAGGKWGRGG 124 (426)
Q Consensus 78 A~Ln~P~GIaVd~-dG~LYVADt~N---------------------~rIrk~d-~g---~-------VstIaGg~~g~~~ 124 (426)
..|..|.||++++ +|.||||-+.| +.|.++. ++ . +..++|.......
T Consensus 381 T~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~ 460 (592)
T 3zwu_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred EEEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccc
Confidence 4689999999996 79999998753 4688775 21 1 1122232211100
Q ss_pred ---CCCCCCcccccCCCCCeeEEECCCCeEEEEEC------------CCCeEEEEEcCCCceEeecCC---CCcceEEEE
Q 014345 125 ---GHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDR------------GNRAIREIQLHFDDCAYQYGS---SFPLGIAVL 186 (426)
Q Consensus 125 ---G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDs------------gN~rIr~I~l~~~~~~~~~~~---g~P~GIAv~ 186 (426)
+..........|+.|-.|+ +++.|+|||+.- +|+.+..+.+.......+... .-.+|+++.
T Consensus 461 ~~~~~~~~~~~~~~f~~PDNL~-fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fs 539 (592)
T 3zwu_A 461 TPKGGSSNITPQNMFNSPDGLG-FDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFS 539 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEE-ECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEEC
T ss_pred cccccccccCCCCCccCCcceE-ECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeEC
Confidence 0011122344699999999 689999999864 356677776654443322111 123445544
Q ss_pred ecCCceEEEEEEEecc
Q 014345 187 LAAGFFGYMLALLQRR 202 (426)
Q Consensus 187 ~g~g~~Gy~~a~lq~~ 202 (426)
.- ..+++...|++
T Consensus 540 pD---g~tlfvniQHP 552 (592)
T 3zwu_A 540 PD---QKTLFVGIQHP 552 (592)
T ss_dssp TT---SSEEEEEEEST
T ss_pred CC---CCEEEEEEECC
Confidence 21 12455566776
No 175
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=93.23 E-value=1.2 Score=43.07 Aligned_cols=69 Identities=16% Similarity=0.206 Sum_probs=50.7
Q ss_pred cceEEEcCCCCEEEEECCCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCC
Q 014345 83 PKGLTVDDRGNIYIADTMNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNR 159 (426)
Q Consensus 83 P~GIaVd~dG~LYVADt~N~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~ 159 (426)
-..|++.++|+++++-..++.|+.+| ++. +.++..+ + -...++|+ +.++|.++++-+..+
T Consensus 272 V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~g-------H---------~~~V~~v~-fSpdg~~laS~S~D~ 334 (365)
T 4h5i_A 272 ITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQA-------H---------SFAITEVT-ISPDSTYVASVSAAN 334 (365)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTS-------S---------SSCEEEEE-ECTTSCEEEEEETTS
T ss_pred eEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCc-------c---------cCCEEEEE-ECCCCCEEEEEeCCC
Confidence 46789999999888877788899999 333 3343221 1 11346788 588999999998899
Q ss_pred eEEEEEcCC
Q 014345 160 AIREIQLHF 168 (426)
Q Consensus 160 rIr~I~l~~ 168 (426)
.|+++++..
T Consensus 335 tvrvw~ip~ 343 (365)
T 4h5i_A 335 TIHIIKLPL 343 (365)
T ss_dssp EEEEEECCT
T ss_pred eEEEEEcCC
Confidence 999999753
No 176
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=92.81 E-value=7.8 Score=38.00 Aligned_cols=115 Identities=15% Similarity=0.155 Sum_probs=64.8
Q ss_pred CceEEEEcCCCc-EEEEECC--CCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCC-EEEE
Q 014345 22 EPYSVEVLPGGE-LLILDSA--NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIA 97 (426)
Q Consensus 22 ~P~GIaVd~dG~-LYVaD~~--n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LYVA 97 (426)
....++++|||. |+++... +..|+.++..+ +....+.+.. .....+++.++|+ |+++
T Consensus 224 ~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~---~~~~~l~~~~----------------~~~~~~~~spdg~~l~~~ 284 (415)
T 2hqs_A 224 HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS---GQIRQVTDGR----------------SNNTEPTWFPDSQNLAFT 284 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTT---CCEEECCCCS----------------SCEEEEEECTTSSEEEEE
T ss_pred cccCEEEcCCCCEEEEEEecCCCceEEEEECCC---CCEEeCcCCC----------------CcccceEECCCCCEEEEE
Confidence 467889999998 5545432 45699998874 3333332210 1245788999997 5544
Q ss_pred EC--CCCEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCe-EEEEECC--CCeEEEEEcCCCc
Q 014345 98 DT--MNMAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCS-LLVIDRG--NRAIREIQLHFDD 170 (426)
Q Consensus 98 Dt--~N~rIrk~d-~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~-LYVaDsg--N~rIr~I~l~~~~ 170 (426)
.. +..+|+.++ .++ +..+.... .....++ +.++|. |+++... ...|+.+++.+..
T Consensus 285 s~~~g~~~i~~~d~~~~~~~~l~~~~-----------------~~~~~~~-~spdG~~l~~~~~~~g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 285 SDQAGRPQVYKVNINGGAPQRITWEG-----------------SQNQDAD-VSSDGKFMVMVSSNGGQQHIAKQDLATGG 346 (415)
T ss_dssp ECTTSSCEEEEEETTSSCCEECCCSS-----------------SEEEEEE-ECTTSSEEEEEEECSSCEEEEEEETTTCC
T ss_pred ECCCCCcEEEEEECCCCCEEEEecCC-----------------CcccCeE-ECCCCCEEEEEECcCCceEEEEEECCCCC
Confidence 42 234788888 333 44332210 0123455 455554 5555443 3578888877655
Q ss_pred eEe
Q 014345 171 CAY 173 (426)
Q Consensus 171 ~~~ 173 (426)
+..
T Consensus 347 ~~~ 349 (415)
T 2hqs_A 347 VQV 349 (415)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 177
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=92.76 E-value=2.4 Score=40.08 Aligned_cols=114 Identities=9% Similarity=0.045 Sum_probs=70.4
Q ss_pred CceEEEEcCCC-cEEEEECCCC---eEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC-CCCEEE
Q 014345 22 EPYSVEVLPGG-ELLILDSANS---NLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYI 96 (426)
Q Consensus 22 ~P~GIaVd~dG-~LYVaD~~n~---rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~-dG~LYV 96 (426)
...+++++++| .++++-...+ .|..++..... ..+..+. .++ -.....|++.+ ++.+++
T Consensus 216 ~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~-~~~~~~~------~~~---------~~~v~~~~~s~~~~~~l~ 279 (416)
T 2pm9_A 216 QLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN-TPLQTLN------QGH---------QKGILSLDWCHQDEHLLL 279 (416)
T ss_dssp CEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT-SCSBCCC------SCC---------SSCEEEEEECSSCSSCEE
T ss_pred ceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC-CCcEEee------cCc---------cCceeEEEeCCCCCCeEE
Confidence 46778888876 4666555555 77777765310 0011110 011 12356899998 888777
Q ss_pred EECCCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECCCCeEEEEEcCCC
Q 014345 97 ADTMNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRGNRAIREIQLHFD 169 (426)
Q Consensus 97 ADt~N~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaDsgN~rIr~I~l~~~ 169 (426)
+-..++.|+.++ .+. +.++.+.. .....++ +.+++ .++++-...+.|+.+++...
T Consensus 280 s~~~dg~v~~wd~~~~~~~~~~~~~~-----------------~~v~~~~-~s~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 280 SSGRDNTVLLWNPESAEQLSQFPARG-----------------NWCFKTK-FAPEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp EEESSSEEEEECSSSCCEEEEEECSS-----------------SCCCCEE-ECTTCTTEEEECCSSSEEEEEESCCC
T ss_pred EEeCCCCEEEeeCCCCccceeecCCC-----------------CceEEEE-ECCCCCCEEEEEecCCcEEEEEccCC
Confidence 777789999999 333 34443311 1245677 46666 78888878899999998753
No 178
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=92.75 E-value=2.3 Score=39.91 Aligned_cols=126 Identities=10% Similarity=-0.056 Sum_probs=71.1
Q ss_pred CceEEEEcCCCc-EEEEECCCCeEEEEeC----CCCcc-c---ccEEEecCCCCcccccCCcccccccCCcceEEEcCCC
Q 014345 22 EPYSVEVLPGGE-LLILDSANSNLYRISS----SLSLY-S---RPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG 92 (426)
Q Consensus 22 ~P~GIaVd~dG~-LYVaD~~n~rI~kid~----dg~~~-g---~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG 92 (426)
...+++++++|. ++++-..++.|..++. ..... - ....+.....+. .... ..-.....|++.++|
T Consensus 47 ~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~v~~~~~s~~~ 120 (425)
T 1r5m_A 47 NIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALS-ASSG-----KTTNQVTCLAWSHDG 120 (425)
T ss_dssp CCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------------CBCEEEEEECTTS
T ss_pred ceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccccccccccccccccccc-cccc-----CCCCceEEEEEcCCC
Confidence 567999999998 7777777888888877 53110 0 112222111010 0000 001135689999999
Q ss_pred CEEEEECCCCEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCc
Q 014345 93 NIYIADTMNMAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDD 170 (426)
Q Consensus 93 ~LYVADt~N~rIrk~d-~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~ 170 (426)
+++++-..++.|+.++ ++. +..+.+.. .....++ +.+++.++++-..++.|+.+++....
T Consensus 121 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~-----------------~~v~~~~-~~~~~~~l~~~~~d~~i~iwd~~~~~ 182 (425)
T 1r5m_A 121 NSIVTGVENGELRLWNKTGALLNVLNFHR-----------------APIVSVK-WNKDGTHIISMDVENVTILWNVISGT 182 (425)
T ss_dssp SEEEEEETTSCEEEEETTSCEEEEECCCC-----------------SCEEEEE-ECTTSSEEEEEETTCCEEEEETTTTE
T ss_pred CEEEEEeCCCeEEEEeCCCCeeeeccCCC-----------------ccEEEEE-ECCCCCEEEEEecCCeEEEEECCCCc
Confidence 8777766778899998 444 33433210 1235566 45566554444456778888876544
Q ss_pred e
Q 014345 171 C 171 (426)
Q Consensus 171 ~ 171 (426)
+
T Consensus 183 ~ 183 (425)
T 1r5m_A 183 V 183 (425)
T ss_dssp E
T ss_pred E
Confidence 4
No 179
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=92.70 E-value=4.1 Score=42.67 Aligned_cols=112 Identities=6% Similarity=0.041 Sum_probs=71.6
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
...+|+++|+|.++++-..++.|..++.... ..+..+.+.. .....++++++|+.+++-..+
T Consensus 15 ~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~--~~~~~~~~~~----------------~~v~~~~~s~~~~~l~~~~~d 76 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLYSGRVEIWNYETQ--VEVRSIQVTE----------------TPVRAGKFIARKNWIIVGSDD 76 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTT--EEEEEEECCS----------------SCEEEEEEEGGGTEEEEEETT
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEECCCC--ceEEEEecCC----------------CcEEEEEEeCCCCEEEEEeCC
Confidence 5789999999997777667889999997642 1223333221 124679999999876666668
Q ss_pred CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCC
Q 014345 102 MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFD 169 (426)
Q Consensus 102 ~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~ 169 (426)
+.|+.++ .+. +.++.+.. .....++ +.+++..+++-..++.|+.+++...
T Consensus 77 g~i~vw~~~~~~~~~~~~~~~-----------------~~v~~~~-~s~~~~~l~~~~~dg~i~vw~~~~~ 129 (814)
T 3mkq_A 77 FRIRVFNYNTGEKVVDFEAHP-----------------DYIRSIA-VHPTKPYVLSGSDDLTVKLWNWENN 129 (814)
T ss_dssp SEEEEEETTTCCEEEEEECCS-----------------SCEEEEE-ECSSSSEEEEEETTSEEEEEEGGGT
T ss_pred CeEEEEECCCCcEEEEEecCC-----------------CCEEEEE-EeCCCCEEEEEcCCCEEEEEECCCC
Confidence 8999998 344 34443311 1234566 4556654444445677777777654
No 180
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=92.70 E-value=2.3 Score=40.28 Aligned_cols=114 Identities=15% Similarity=0.132 Sum_probs=70.9
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
.-..|+++++|.++++-...+.|..++.++... ........ |+ -..-..|++.++|+++++-..+
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~-~~~~~~~~-----~h---------~~~v~~~~~sp~g~~l~s~s~D 82 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSW-ICKSVLSE-----GH---------QRTVRKVAWSPCGNYLASASFD 82 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEETTEE-EEEEEECS-----SC---------SSCEEEEEECTTSSEEEEEETT
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcc-eeeeeecc-----cc---------CCcEEEEEECCCCCEEEEEECC
Confidence 356899999999888877888888887764210 01111111 11 1124679999999987777667
Q ss_pred CEEEEEc--CCCc---EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 014345 102 MAIRKIS--DSGV---TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 168 (426)
Q Consensus 102 ~rIrk~d--~g~V---stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~ 168 (426)
+.|+.++ .+.. .++.+- -.....|+ +.+++.++++-...+.|+.+++..
T Consensus 83 ~~v~iw~~~~~~~~~~~~~~~h-----------------~~~v~~v~-~sp~~~~l~s~s~D~~v~iwd~~~ 136 (345)
T 3fm0_A 83 ATTCIWKKNQDDFECVTTLEGH-----------------ENEVKSVA-WAPSGNLLATCSRDKSVWVWEVDE 136 (345)
T ss_dssp SCEEEEEECCC-EEEEEEECCC-----------------SSCEEEEE-ECTTSSEEEEEETTSCEEEEEECT
T ss_pred CcEEEEEccCCCeEEEEEccCC-----------------CCCceEEE-EeCCCCEEEEEECCCeEEEEECCC
Confidence 7777776 3332 233221 01235666 466777777776778888888764
No 181
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=92.67 E-value=1.9 Score=42.29 Aligned_cols=117 Identities=13% Similarity=0.145 Sum_probs=73.8
Q ss_pred CceEEEEcC-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC-CCCEEEEEC
Q 014345 22 EPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~-dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~-dG~LYVADt 99 (426)
.-++|++.| +++++++-...+.|..++.+... ....+.. .|+ . ..-.+|++.+ +++++++=.
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~--~~~~~~~-----~gH-~--------~~V~~l~f~p~~~~~l~s~s 184 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKD--KPTFIKG-----IGA-G--------GSITGLKFNPLNTNQFYASS 184 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSSCCS--CCEEECC-----CSS-S--------CCCCEEEECSSCTTEEEEEC
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCC--ceeEEEc-----cCC-C--------CCEEEEEEeCCCCCEEEEEe
Confidence 357899998 56777777788899999876421 1122211 111 1 1236789986 688888877
Q ss_pred CCCEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCC
Q 014345 100 MNMAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFD 169 (426)
Q Consensus 100 ~N~rIrk~d-~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~ 169 (426)
.++.|+.+| .+. ..++...... -..-..++ +.+++.++++-..++.|+.+++.+.
T Consensus 185 ~D~~v~iwd~~~~~~~~~~~~~~~--------------~~~~~~~~-~~~~~~~l~~g~~dg~i~~wd~~~~ 241 (435)
T 4e54_B 185 MEGTTRLQDFKGNILRVFASSDTI--------------NIWFCSLD-VSASSRMVVTGDNVGNVILLNMDGK 241 (435)
T ss_dssp SSSCEEEEETTSCEEEEEECCSSC--------------SCCCCCEE-EETTTTEEEEECSSSBEEEEESSSC
T ss_pred CCCEEEEeeccCCceeEEeccCCC--------------CccEEEEE-ECCCCCEEEEEeCCCcEeeeccCcc
Confidence 788999999 544 4444432110 01224556 4567777777777888998887654
No 182
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=92.62 E-value=0.8 Score=44.02 Aligned_cols=116 Identities=9% Similarity=-0.011 Sum_probs=71.2
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCccccc-EEEecCCCCcccccCCcccccccCCcceEEEcCCCC-EEEEEC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRP-KLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v-~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LYVADt 99 (426)
.-.+|++.++|+++++-...+.|..++... +.. ..+.+. -...+.|++.+++. ++++-.
T Consensus 141 ~V~~v~~spdg~~l~sgs~dg~v~iwd~~~---~~~~~~~~~h----------------~~~v~~v~~s~~~~~~~~s~~ 201 (357)
T 4g56_B 141 IVKTLSVFSDGTQAVSGGKDFSVKVWDLSQ---KAVLKSYNAH----------------SSEVNCVAACPGKDTIFLSCG 201 (357)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEETTT---TEEEEEECCC----------------SSCEEEEEECTTCSSCEEEEE
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEECCC---CcEEEEEcCC----------------CCCEEEEEEccCCCceeeeec
Confidence 357889999999888777788899998864 222 222111 11246788888764 667766
Q ss_pred CCCEEEEEc--CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 014345 100 MNMAIRKIS--DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 171 (426)
Q Consensus 100 ~N~rIrk~d--~g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~ 171 (426)
.++.|+.+| .+.. ..+.... .-..+..|++.+..+.++++-..++.|+.+++....+
T Consensus 202 ~dg~v~~wd~~~~~~~~~~~~~~---------------~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~ 261 (357)
T 4g56_B 202 EDGRILLWDTRKPKPATRIDFCA---------------SDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDS 261 (357)
T ss_dssp TTSCEEECCTTSSSCBCBCCCTT---------------CCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGG
T ss_pred cCCceEEEECCCCceeeeeeecc---------------ccccccchhhhhcccceEEEeecccceeEEECCCCcE
Confidence 678888888 2222 1111100 0113456775444566777666678888888775443
No 183
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=92.60 E-value=4 Score=39.17 Aligned_cols=116 Identities=10% Similarity=0.151 Sum_probs=63.3
Q ss_pred CceEEEEcCCC-cEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC-CCCEEEEEC
Q 014345 22 EPYSVEVLPGG-ELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~dG-~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~-dG~LYVADt 99 (426)
.-..+++.+++ .++++-...+.|+.+|... ++........ + .-.....+++.+ +++++++-.
T Consensus 171 ~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~---~~~~~~~~~~----~---------~~~~~~~~~~~p~~~~~l~sg~ 234 (344)
T 4gqb_B 171 QVTCVAASPHKDSVFLSCSEDNRILLWDTRC---PKPASQIGCS----A---------PGYLPTSLAWHPQQSEVFVFGD 234 (344)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTS---SSCEEECC-----------------CCCEEEEEECSSCTTEEEEEE
T ss_pred ceEEEEecCCCCCceeeeccccccccccccc---cceeeeeecc----e---------eeccceeeeecCCCCcceEEec
Confidence 34677777766 3666666667777777653 2221111110 0 011256788887 457888777
Q ss_pred CCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECCCCeEEEEEcCCCce
Q 014345 100 MNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRGNRAIREIQLHFDDC 171 (426)
Q Consensus 100 ~N~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaDsgN~rIr~I~l~~~~~ 171 (426)
.++.|+.+| .+. +.++.+-.. .-..|++ .+++ .++++-...+.|+.++.....+
T Consensus 235 ~dg~v~~wd~~~~~~~~~~~~h~~-----------------~v~~v~f-sp~g~~~lasgs~D~~i~vwd~~~~~~ 292 (344)
T 4gqb_B 235 ENGTVSLVDTKSTSCVLSSAVHSQ-----------------CVTGLVF-SPHSVPFLASLSEDCSLAVLDSSLSEL 292 (344)
T ss_dssp TTSEEEEEESCC--CCEEEECCSS-----------------CEEEEEE-CSSSSCCEEEEETTSCEEEECTTCCEE
T ss_pred cCCcEEEEECCCCcEEEEEcCCCC-----------------CEEEEEE-ccCCCeEEEEEeCCCeEEEEECCCCcE
Confidence 788999998 333 555554210 1244553 4444 4555555566677776655443
No 184
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=92.57 E-value=2 Score=40.61 Aligned_cols=113 Identities=10% Similarity=0.001 Sum_probs=73.2
Q ss_pred CceEEEEcC-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECC
Q 014345 22 EPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 100 (426)
Q Consensus 22 ~P~GIaVd~-dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~ 100 (426)
...++++.+ +++++++-...+.|..++..+ ..+..+.+.. +. -.....+++.+++.++++-..
T Consensus 120 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~---~~~~~~~~~~----~~---------~~~v~~~~~~~~~~~l~~~~~ 183 (383)
T 3ei3_B 120 AITGMKFNQFNTNQLFVSSIRGATTLRDFSG---SVIQVFAKTD----SW---------DYWYCCVDVSVSRQMLATGDS 183 (383)
T ss_dssp BEEEEEEETTEEEEEEEEETTTEEEEEETTS---CEEEEEECCC----CS---------SCCEEEEEEETTTTEEEEEET
T ss_pred ceeEEEeCCCCCCEEEEEeCCCEEEEEECCC---CceEEEeccC----CC---------CCCeEEEEECCCCCEEEEECC
Confidence 456788887 566666666677888888764 2333333221 00 122568999999998888777
Q ss_pred CCEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCe-EEEEECCCCeEEEEEcCC
Q 014345 101 NMAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCS-LLVIDRGNRAIREIQLHF 168 (426)
Q Consensus 101 N~rIrk~d-~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~-LYVaDsgN~rIr~I~l~~ 168 (426)
++.|+.++ .+. +.++.+.. .....|+ +.+++. ++++-..++.|+.+++..
T Consensus 184 d~~i~i~d~~~~~~~~~~~h~-----------------~~v~~~~-~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 184 TGRLLLLGLDGHEIFKEKLHK-----------------AKVTHAE-FNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp TSEEEEEETTSCEEEEEECSS-----------------SCEEEEE-ECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred CCCEEEEECCCCEEEEeccCC-----------------CcEEEEE-ECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 89999999 544 44444311 1245667 456665 777777778899998875
No 185
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=92.54 E-value=5.1 Score=38.14 Aligned_cols=115 Identities=9% Similarity=0.059 Sum_probs=70.7
Q ss_pred ceEEEEcC--CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECC
Q 014345 23 PYSVEVLP--GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 100 (426)
Q Consensus 23 P~GIaVd~--dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~ 100 (426)
...+++.+ +|+++++-...+.|..++..... .+..+.+. -..-+.|++.++|+++++-..
T Consensus 199 v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~--~~~~~~~h----------------~~~v~~v~~~p~~~~l~s~s~ 260 (354)
T 2pbi_B 199 VLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ--CVQAFETH----------------ESDVNSVRYYPSGDAFASGSD 260 (354)
T ss_dssp EEEEEECCCSSCCEEEEEETTSCEEEEETTTCC--EEEEECCC----------------SSCEEEEEECTTSSEEEEEET
T ss_pred eEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc--EEEEecCC----------------CCCeEEEEEeCCCCEEEEEeC
Confidence 45666655 56777776677888888876321 12222211 112467999999998888777
Q ss_pred CCEEEEEc-CCC--cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 014345 101 NMAIRKIS-DSG--VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 171 (426)
Q Consensus 101 N~rIrk~d-~g~--VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~ 171 (426)
++.|+.+| ... +..+.... .......++ +.+++.++++-...+.|+.+++....+
T Consensus 261 D~~v~lwd~~~~~~~~~~~~~~---------------~~~~~~~~~-~s~~g~~l~~g~~d~~i~vwd~~~~~~ 318 (354)
T 2pbi_B 261 DATCRLYDLRADREVAIYSKES---------------IIFGASSVD-FSLSGRLLFAGYNDYTINVWDVLKGSR 318 (354)
T ss_dssp TSCEEEEETTTTEEEEEECCTT---------------CCSCEEEEE-ECTTSSEEEEEETTSCEEEEETTTCSE
T ss_pred CCeEEEEECCCCcEEEEEcCCC---------------cccceeEEE-EeCCCCEEEEEECCCcEEEEECCCCce
Confidence 88999999 322 22222110 011234566 567788777777788899998765443
No 186
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=92.51 E-value=5.8 Score=36.98 Aligned_cols=115 Identities=12% Similarity=0.088 Sum_probs=70.4
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC------CCCEE
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD------RGNIY 95 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~------dG~LY 95 (426)
.-..+++++++.++++-...+.|..++..+. .+..+.|.. ..-..+++.+ ++.++
T Consensus 109 ~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~---~~~~~~~h~----------------~~v~~~~~~~~~~~~~~~~~l 169 (319)
T 3frx_A 109 DVMSVDIDKKASMIISGSRDKTIKVWTIKGQ---CLATLLGHN----------------DWVSQVRVVPNEKADDDSVTI 169 (319)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEETTSC---EEEEECCCS----------------SCEEEEEECCC------CCEE
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---eEEEEeccC----------------CcEEEEEEccCCCCCCCccEE
Confidence 4678888888888888777888888887642 233333221 0123344444 34566
Q ss_pred EEECCCCEEEEEcC--CCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceE
Q 014345 96 IADTMNMAIRKISD--SGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCA 172 (426)
Q Consensus 96 VADt~N~rIrk~d~--g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~ 172 (426)
++-..++.|+.++- ... ..+.+-. .....++ +.+++.++++-...+.|+.+++....+.
T Consensus 170 ~s~~~d~~i~~wd~~~~~~~~~~~~h~-----------------~~v~~~~-~sp~g~~l~s~~~dg~i~iwd~~~~~~~ 231 (319)
T 3frx_A 170 ISAGNDKMVKAWNLNQFQIEADFIGHN-----------------SNINTLT-ASPDGTLIASAGKDGEIMLWNLAAKKAM 231 (319)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCC-----------------SCEEEEE-ECTTSSEEEEEETTCEEEEEETTTTEEE
T ss_pred EEEeCCCEEEEEECCcchhheeecCCC-----------------CcEEEEE-EcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 66666788888882 222 2332210 1234566 5777887777777889999998776554
Q ss_pred e
Q 014345 173 Y 173 (426)
Q Consensus 173 ~ 173 (426)
.
T Consensus 232 ~ 232 (319)
T 3frx_A 232 Y 232 (319)
T ss_dssp E
T ss_pred E
Confidence 3
No 187
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=92.44 E-value=2.8 Score=39.94 Aligned_cols=110 Identities=14% Similarity=0.148 Sum_probs=69.8
Q ss_pred EEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCCCEEEE
Q 014345 27 EVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNMAIRK 106 (426)
Q Consensus 27 aVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N~rIrk 106 (426)
++.++|+++++-..++.|..++... +....... ++ -.....|++.++|+++++-..++.|+.
T Consensus 104 ~~~~~~~~l~~~~~dg~i~iwd~~~---~~~~~~~~------~h---------~~~v~~~~~~~~~~~l~s~s~d~~i~i 165 (420)
T 3vl1_A 104 TAKLQMRRFILGTTEGDIKVLDSNF---NLQREIDQ------AH---------VSEITKLKFFPSGEALISSSQDMQLKI 165 (420)
T ss_dssp EECSSSCEEEEEETTSCEEEECTTS---CEEEEETT------SS---------SSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEecCCCEEEEEECCCCEEEEeCCC---cceeeecc------cc---------cCccEEEEECCCCCEEEEEeCCCeEEE
Confidence 4566787777666777888887763 22222210 11 123568999999987777777889999
Q ss_pred Ec--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceE
Q 014345 107 IS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCA 172 (426)
Q Consensus 107 ~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~ 172 (426)
++ .+. +.++.+.. .....+++ .+++.++++-...+.|+.+++....+.
T Consensus 166 wd~~~~~~~~~~~~h~-----------------~~v~~~~~-~~~~~~l~s~~~d~~v~iwd~~~~~~~ 216 (420)
T 3vl1_A 166 WSVKDGSNPRTLIGHR-----------------ATVTDIAI-IDRGRNVLSASLDGTIRLWECGTGTTI 216 (420)
T ss_dssp EETTTCCCCEEEECCS-----------------SCEEEEEE-ETTTTEEEEEETTSCEEEEETTTTEEE
T ss_pred EeCCCCcCceEEcCCC-----------------CcEEEEEE-cCCCCEEEEEcCCCcEEEeECCCCcee
Confidence 98 343 45554311 12356674 556666666666788999998765554
No 188
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=92.41 E-value=4.1 Score=38.06 Aligned_cols=116 Identities=14% Similarity=0.111 Sum_probs=70.9
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
....++++++|.++++-...+.|+.++..... .+..+.+. .....+++.++|.++++-..
T Consensus 198 ~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~-----------------~~v~~~~~sp~~~~la~~~~- 257 (319)
T 3frx_A 198 NINTLTASPDGTLIASAGKDGEIMLWNLAAKK--AMYTLSAQ-----------------DEVFSLAFSPNRYWLAAATA- 257 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEETTTTE--EEEEEECC-----------------SCEEEEEECSSSSEEEEEET-
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--EEEEecCC-----------------CcEEEEEEcCCCCEEEEEcC-
Confidence 46789999999988887788899999887421 12222111 12467999999986665443
Q ss_pred CEEEEEc-CCC--cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 014345 102 MAIRKIS-DSG--VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 167 (426)
Q Consensus 102 ~rIrk~d-~g~--VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~ 167 (426)
..|+.++ +.. +..+.....+. ....-.....++ ..++|.++++-...+.|+.+++.
T Consensus 258 ~~i~v~~~~~~~~~~~~~~~~~~~---------~~~~~~~v~~~~-~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 258 TGIKVFSLDPQYLVDDLRPEFAGY---------SKAAEPHAVSLA-WSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp TEEEEEEETTEEEEEEECCCCTTC---------CGGGCCCEEEEE-ECTTSSEEEEEETTSCEEEEEEE
T ss_pred CCcEEEEeCcCeeeeccCcccccc---------ccCcCcceeEEE-ECCCCCEEEEeecCceEEEEEEe
Confidence 4466666 332 23332211110 000112335677 57888888887778899988754
No 189
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=92.35 E-value=3.6 Score=38.89 Aligned_cols=114 Identities=14% Similarity=0.094 Sum_probs=69.1
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
.-.+|+++++|+++++-...+.|..++.+......+..+.|. -..-..|++.++|+++++-..+
T Consensus 63 ~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h----------------~~~v~~v~~sp~~~~l~s~s~D 126 (345)
T 3fm0_A 63 TVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGH----------------ENEVKSVAWAPSGNLLATCSRD 126 (345)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCC----------------SSCEEEEEECTTSSEEEEEETT
T ss_pred cEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCC----------------CCCceEEEEeCCCCEEEEEECC
Confidence 457889999999877777777777776653210111222221 1124689999999988887777
Q ss_pred CEEEEEc--CCC-cE---EEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCC
Q 014345 102 MAIRKIS--DSG-VT---TIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFD 169 (426)
Q Consensus 102 ~rIrk~d--~g~-Vs---tIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~ 169 (426)
+.|+.++ .+. .. ++.+. -..-..++ ..+++.++++-...+.|+.++....
T Consensus 127 ~~v~iwd~~~~~~~~~~~~~~~h-----------------~~~v~~~~-~~p~~~~l~s~s~d~~i~~w~~~~~ 182 (345)
T 3fm0_A 127 KSVWVWEVDEEDEYECVSVLNSH-----------------TQDVKHVV-WHPSQELLASASYDDTVKLYREEED 182 (345)
T ss_dssp SCEEEEEECTTSCEEEEEEECCC-----------------CSCEEEEE-ECSSSSCEEEEETTSCEEEEEEETT
T ss_pred CeEEEEECCCCCCeEEEEEecCc-----------------CCCeEEEE-ECCCCCEEEEEeCCCcEEEEEecCC
Confidence 8888887 332 22 22110 01124556 4666776666666778888776554
No 190
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=92.31 E-value=7.4 Score=37.33 Aligned_cols=115 Identities=10% Similarity=0.027 Sum_probs=70.3
Q ss_pred CceEEEEcCCC-cEEEEEC--CCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEE-
Q 014345 22 EPYSVEVLPGG-ELLILDS--ANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIA- 97 (426)
Q Consensus 22 ~P~GIaVd~dG-~LYVaD~--~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVA- 97 (426)
...++++.++| .++++.. ..+.|..++... +........ -.....+++.++|..+++
T Consensus 261 ~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~---~~~~~~~~~----------------~~~v~~~~~s~~~~~l~~~ 321 (401)
T 4aez_A 261 AVKAVAWCPWQSNLLATGGGTMDKQIHFWNAAT---GARVNTVDA----------------GSQVTSLIWSPHSKEIMST 321 (401)
T ss_dssp CCCEEEECTTSTTEEEEECCTTTCEEEEEETTT---CCEEEEEEC----------------SSCEEEEEECSSSSEEEEE
T ss_pred eEEEEEECCCCCCEEEEecCCCCCEEEEEECCC---CCEEEEEeC----------------CCcEEEEEECCCCCeEEEE
Confidence 46788888865 4666643 577888888764 222222111 012578999999987776
Q ss_pred -ECCCCEEEEEc--CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCc
Q 014345 98 -DTMNMAIRKIS--DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDD 170 (426)
Q Consensus 98 -Dt~N~rIrk~d--~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~ 170 (426)
...++.|+.++ .+....+.--. + .-.....++ +.+++.++++-..++.|+.+++....
T Consensus 322 ~g~~dg~i~v~~~~~~~~~~~~~~~-~-------------h~~~v~~~~-~s~dg~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 322 HGFPDNNLSIWSYSSSGLTKQVDIP-A-------------HDTRVLYSA-LSPDGRILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp ECTTTCEEEEEEEETTEEEEEEEEE-C-------------CSSCCCEEE-ECTTSSEEEEECTTSEEEEEECCC--
T ss_pred eecCCCcEEEEecCCccceeEEEec-C-------------CCCCEEEEE-ECCCCCEEEEEeCCCcEEEEECCCCc
Confidence 44678899888 33332221100 0 011345677 57788877777778999999987544
No 191
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=92.27 E-value=2.6 Score=44.25 Aligned_cols=112 Identities=8% Similarity=0.074 Sum_probs=69.7
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
...+++++++|.++++-..++.|..++.+... .+..+.+. -.....+++.++|..+++-..+
T Consensus 57 ~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~~~----------------~~~v~~~~~s~~~~~l~~~~~d 118 (814)
T 3mkq_A 57 PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE--KVVDFEAH----------------PDYIRSIAVHPTKPYVLSGSDD 118 (814)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEETTTCC--EEEEEECC----------------SSCEEEEEECSSSSEEEEEETT
T ss_pred cEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--EEEEEecC----------------CCCEEEEEEeCCCCEEEEEcCC
Confidence 46788999988876666678889999876421 22233221 1125689999999866665567
Q ss_pred CEEEEEc-C-C-Cc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 014345 102 MAIRKIS-D-S-GV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 168 (426)
Q Consensus 102 ~rIrk~d-~-g-~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~ 168 (426)
+.|+.++ . + .. .++.+.. .....+++.+.++.++++-..++.|+.+++..
T Consensus 119 g~i~vw~~~~~~~~~~~~~~~~-----------------~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~ 172 (814)
T 3mkq_A 119 LTVKLWNWENNWALEQTFEGHE-----------------HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ 172 (814)
T ss_dssp SEEEEEEGGGTSEEEEEEECCS-----------------SCEEEEEEETTEEEEEEEEETTSEEEEEETTC
T ss_pred CEEEEEECCCCceEEEEEcCCC-----------------CcEEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 8899888 3 3 22 3333210 12345564332666666666677888887754
No 192
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=92.25 E-value=2.9 Score=37.68 Aligned_cols=113 Identities=10% Similarity=-0.003 Sum_probs=69.6
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccc---cEEEecCCCCcccccCCcccccccCCcceEEEcC--CCCEEE
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSR---PKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD--RGNIYI 96 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~---v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~--dG~LYV 96 (426)
.-.+|+++++|+++++-..++.|..++.+... .. ...+.+. -.....|++.+ ++++++
T Consensus 13 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-~~~~~~~~~~~~----------------~~~v~~~~~~~~~d~~~l~ 75 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCSSDQHIKVFKLDKDT-SNWELSDSWRAH----------------DSSIVAIDWASPEYGRIIA 75 (351)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEEECSSS-CCEEEEEEEECC----------------SSCEEEEEECCGGGCSEEE
T ss_pred ceeEEEEcCCCCEEEEeeCCCeEEEEECCCCC-CcceecceeccC----------------CCcEEEEEEcCCCCCCEEE
Confidence 46899999999987777778889888876321 11 1112121 11246788887 577777
Q ss_pred EECCCCEEEEEc-CCC-----------cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCC--CeEEEEECCCCeEE
Q 014345 97 ADTMNMAIRKIS-DSG-----------VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSS--CSLLVIDRGNRAIR 162 (426)
Q Consensus 97 ADt~N~rIrk~d-~g~-----------VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~--G~LYVaDsgN~rIr 162 (426)
+=..++.|+.++ ..+ +.++.+. -.....|+ +.++ +.++++-..++.|+
T Consensus 76 s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~-----------------~~~v~~~~-~~~~~~~~~l~~~~~dg~v~ 137 (351)
T 3f3f_A 76 SASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDS-----------------KGSLYSVK-FAPAHLGLKLACLGNDGILR 137 (351)
T ss_dssp EEETTSCEEEEEECTTSCTTSSCSEEEEEEECCC-----------------SSCEEEEE-ECCGGGCSEEEEEETTCEEE
T ss_pred EEcCCCeEEEEecCCCcccccccCcceeeeeccc-----------------CCceeEEE-EcCCCCCcEEEEecCCCcEE
Confidence 766677888887 322 2222211 01235666 4555 66666666678888
Q ss_pred EEEcCCC
Q 014345 163 EIQLHFD 169 (426)
Q Consensus 163 ~I~l~~~ 169 (426)
.+++...
T Consensus 138 iwd~~~~ 144 (351)
T 3f3f_A 138 LYDALEP 144 (351)
T ss_dssp EEECSST
T ss_pred EecCCCh
Confidence 8887653
No 193
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=92.09 E-value=3.2 Score=38.15 Aligned_cols=115 Identities=13% Similarity=0.079 Sum_probs=73.5
Q ss_pred CceEEEEcCC----CcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC-CCCEEE
Q 014345 22 EPYSVEVLPG----GELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYI 96 (426)
Q Consensus 22 ~P~GIaVd~d----G~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~-dG~LYV 96 (426)
....+++.++ |.++++-..++.|..++..... .+..+.+. -.....|++.+ ++++++
T Consensus 71 ~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~--~~~~~~~~----------------~~~i~~~~~~~~~~~~l~ 132 (366)
T 3k26_A 71 NFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQ--CIKHYVGH----------------GNAINELKFHPRDPNLLL 132 (366)
T ss_dssp CEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCC--EEEEEESC----------------CSCEEEEEECSSCTTEEE
T ss_pred cEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhce--EeeeecCC----------------CCcEEEEEECCCCCCEEE
Confidence 4678888887 6677777788899999876421 12333222 11256789998 888777
Q ss_pred EECCCCEEEEEc--CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 014345 97 ADTMNMAIRKIS--DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 168 (426)
Q Consensus 97 ADt~N~rIrk~d--~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~ 168 (426)
+-..++.|+.++ .+..........+ .-.....++ +.+++.++++-..++.|+.+++..
T Consensus 133 s~~~dg~i~iwd~~~~~~~~~~~~~~~-------------~~~~v~~~~-~~~~~~~l~~~~~dg~i~i~d~~~ 192 (366)
T 3k26_A 133 SVSKDHALRLWNIQTDTLVAIFGGVEG-------------HRDEVLSAD-YDLLGEKIMSCGMDHSLKLWRINS 192 (366)
T ss_dssp EEETTSCEEEEETTTTEEEEEECSTTS-------------CSSCEEEEE-ECTTSSEEEEEETTSCEEEEESCS
T ss_pred EEeCCCeEEEEEeecCeEEEEeccccc-------------ccCceeEEE-ECCCCCEEEEecCCCCEEEEECCC
Confidence 777788899998 3333222211000 011356677 466777767666688999999875
No 194
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=92.07 E-value=5.1 Score=37.53 Aligned_cols=114 Identities=8% Similarity=-0.037 Sum_probs=74.1
Q ss_pred CceEEEEcC--CCcEEEEECCCCeEEEEeCCCCcccccEEEe-cCCCCcccccCCcccccccCCcceEEEcCCCCEEEEE
Q 014345 22 EPYSVEVLP--GGELLILDSANSNLYRISSSLSLYSRPKLVA-GSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIAD 98 (426)
Q Consensus 22 ~P~GIaVd~--dG~LYVaD~~n~rI~kid~dg~~~g~v~~va-G~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVAD 98 (426)
...++++.+ +|+++++-...+.|..++... +....+. +.. -.....++++++|.++++-
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~---~~~~~~~~~~~---------------~~~i~~~~~~pdg~~lasg 188 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADNRGTIGFQSYED---DSQYIVHSAKS---------------DVEYSSGVLHKDSLLLALY 188 (343)
T ss_dssp CEEEEECCC---CCEEEEEETTCCEEEEESSS---SCEEEEECCCS---------------SCCCCEEEECTTSCEEEEE
T ss_pred CEEEEEcCCCCCCCEEEEEeCCCcEEEEECCC---CcEEEEEecCC---------------CCceEEEEECCCCCEEEEE
Confidence 467889999 999888777888999999874 2222221 110 1125689999999999887
Q ss_pred CCCCEEEEEc--CCC-c-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 014345 99 TMNMAIRKIS--DSG-V-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 171 (426)
Q Consensus 99 t~N~rIrk~d--~g~-V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~ 171 (426)
..++.|+.+| .+. + .++.++ + -.....|+ +.+++.++++-..+ .|+.+++....+
T Consensus 189 ~~dg~i~iwd~~~~~~~~~~~~~~-------h---------~~~v~~l~-fs~~g~~l~s~~~~-~v~iwd~~~~~~ 247 (343)
T 3lrv_A 189 SPDGILDVYNLSSPDQASSRFPVD-------E---------EAKIKEVK-FADNGYWMVVECDQ-TVVCFDLRKDVG 247 (343)
T ss_dssp CTTSCEEEEESSCTTSCCEECCCC-------T---------TSCEEEEE-ECTTSSEEEEEESS-BEEEEETTSSTT
T ss_pred cCCCEEEEEECCCCCCCccEEecc-------C---------CCCEEEEE-EeCCCCEEEEEeCC-eEEEEEcCCCCc
Confidence 7789999999 333 2 233220 0 01345677 46677665555444 999999876544
No 195
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=91.98 E-value=4.6 Score=42.19 Aligned_cols=119 Identities=11% Similarity=0.091 Sum_probs=74.5
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCC--CEEEEEC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG--NIYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG--~LYVADt 99 (426)
.-.+|+++++|.++++-+..+.|..++..+. ....+... ..++ -..-..+++.+++ .++++-.
T Consensus 474 ~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~---~~~~~~~~---~~~h---------~~~v~~~~~~~~~~~~~l~s~s 538 (694)
T 3dm0_A 474 DVLSVAFSLDNRQIVSASRDRTIKLWNTLGE---CKYTISEG---GEGH---------RDWVSCVRFSPNTLQPTIVSAS 538 (694)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECTTSC---EEEEECSS---TTSC---------SSCEEEEEECSCSSSCEEEEEE
T ss_pred CEEEEEEeCCCCEEEEEeCCCEEEEEECCCC---cceeeccC---CCCC---------CCcEEEEEEeCCCCcceEEEEe
Confidence 4578888888887777777788888876532 11222111 1111 1124578888776 4666666
Q ss_pred CCCEEEEEc--CCCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEe
Q 014345 100 MNMAIRKIS--DSGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAY 173 (426)
Q Consensus 100 ~N~rIrk~d--~g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~~ 173 (426)
.++.|+.++ .+.. .++.+.. .....|+ +.+++.++++-...+.|+.+++....+..
T Consensus 539 ~d~~v~vwd~~~~~~~~~~~~h~-----------------~~v~~v~-~spdg~~l~sg~~Dg~i~iwd~~~~~~~~ 597 (694)
T 3dm0_A 539 WDKTVKVWNLSNCKLRSTLAGHT-----------------GYVSTVA-VSPDGSLCASGGKDGVVLLWDLAEGKKLY 597 (694)
T ss_dssp TTSCEEEEETTTCCEEEEECCCS-----------------SCEEEEE-ECTTSSEEEEEETTSBCEEEETTTTEEEE
T ss_pred CCCeEEEEECCCCcEEEEEcCCC-----------------CCEEEEE-EeCCCCEEEEEeCCCeEEEEECCCCceEE
Confidence 678888888 3333 3443210 1235666 57788888888888999999988766554
No 196
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=91.94 E-value=1.6 Score=42.87 Aligned_cols=113 Identities=10% Similarity=0.024 Sum_probs=70.9
Q ss_pred CceEEEEcC-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECC
Q 014345 22 EPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 100 (426)
Q Consensus 22 ~P~GIaVd~-dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~ 100 (426)
.-.+|++.| +++++++-...+.|..++..+ +....+.... .. -..-..++++++|.++++-..
T Consensus 166 ~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~---~~~~~~~~~~-~~------------~~~~~~~~~~~~~~~l~~g~~ 229 (435)
T 4e54_B 166 SITGLKFNPLNTNQFYASSMEGTTRLQDFKG---NILRVFASSD-TI------------NIWFCSLDVSASSRMVVTGDN 229 (435)
T ss_dssp CCCEEEECSSCTTEEEEECSSSCEEEEETTS---CEEEEEECCS-SC------------SCCCCCEEEETTTTEEEEECS
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEeeccC---CceeEEeccC-CC------------CccEEEEEECCCCCEEEEEeC
Confidence 356888887 677777777778888888774 2333443221 00 112356899999998888888
Q ss_pred CCEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECCCCeEEEEEcCC
Q 014345 101 NMAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRGNRAIREIQLHF 168 (426)
Q Consensus 101 N~rIrk~d-~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaDsgN~rIr~I~l~~ 168 (426)
++.|+.++ ++. +.++.+- -..-.+|++ .+++ .++++-...+.|+.+++..
T Consensus 230 dg~i~~wd~~~~~~~~~~~h-----------------~~~v~~v~~-~p~~~~~~~s~s~d~~v~iwd~~~ 282 (435)
T 4e54_B 230 VGNVILLNMDGKELWNLRMH-----------------KKKVTHVAL-NPCCDWFLATASVDQTVKIWDLRQ 282 (435)
T ss_dssp SSBEEEEESSSCBCCCSBCC-----------------SSCEEEEEE-CTTCSSEEEEEETTSBCCEEETTT
T ss_pred CCcEeeeccCcceeEEEecc-----------------cceEEeeee-cCCCceEEEEecCcceeeEEeccc
Confidence 88899998 443 2222210 012345664 4444 5666666678888888765
No 197
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=91.91 E-value=5.3 Score=39.24 Aligned_cols=113 Identities=14% Similarity=0.148 Sum_probs=65.4
Q ss_pred CceEEEEcCCCc-EEEEECC--CCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCC-EEEE
Q 014345 22 EPYSVEVLPGGE-LLILDSA--NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIA 97 (426)
Q Consensus 22 ~P~GIaVd~dG~-LYVaD~~--n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LYVA 97 (426)
...+++++|||. |+++... ...|+.++..+ ++...+.+.. .....++++++|+ |+++
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~t---g~~~~l~~~~----------------~~~~~~~~spdg~~la~~ 240 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLAN---GAVRQVASFP----------------RHNGAPAFSPDGSKLAFA 240 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTT---CCEEEEECCS----------------SCEEEEEECTTSSEEEEE
T ss_pred cceeeEEcCCCCEEEEEEecCCCcEEEEEECCC---CcEEEeecCC----------------CcccCEEEcCCCCEEEEE
Confidence 467889999997 4444433 25899999875 3444443321 1246789999998 5545
Q ss_pred EC--CCCEEEEEc-C-CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCe-EEEEEC--CCCeEEEEEcCCCc
Q 014345 98 DT--MNMAIRKIS-D-SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCS-LLVIDR--GNRAIREIQLHFDD 170 (426)
Q Consensus 98 Dt--~N~rIrk~d-~-g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~-LYVaDs--gN~rIr~I~l~~~~ 170 (426)
-. ++..|+.++ . +....+.+.. .....++ ..++|. |+++.. +..+|+.+++.+..
T Consensus 241 ~~~~g~~~i~~~d~~~~~~~~l~~~~-----------------~~~~~~~-~spdg~~l~~~s~~~g~~~i~~~d~~~~~ 302 (415)
T 2hqs_A 241 LSKTGSLNLYVMDLASGQIRQVTDGR-----------------SNNTEPT-WFPDSQNLAFTSDQAGRPQVYKVNINGGA 302 (415)
T ss_dssp ECTTSSCEEEEEETTTCCEEECCCCS-----------------SCEEEEE-ECTTSSEEEEEECTTSSCEEEEEETTSSC
T ss_pred EecCCCceEEEEECCCCCEEeCcCCC-----------------CcccceE-ECCCCCEEEEEECCCCCcEEEEEECCCCC
Confidence 43 245788888 3 3344443211 0234556 455664 554432 23478888877654
Q ss_pred e
Q 014345 171 C 171 (426)
Q Consensus 171 ~ 171 (426)
+
T Consensus 303 ~ 303 (415)
T 2hqs_A 303 P 303 (415)
T ss_dssp C
T ss_pred E
Confidence 4
No 198
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=91.90 E-value=2.2 Score=41.76 Aligned_cols=115 Identities=9% Similarity=-0.004 Sum_probs=72.2
Q ss_pred CceEEEEcCCCc-EEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCC-CEEEEEC
Q 014345 22 EPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG-NIYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~dG~-LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG-~LYVADt 99 (426)
.+..|++.+++. ++++-...+.|..++..... ..+..+.+. -.....|++.+++ .++++-.
T Consensus 279 ~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~-~~~~~~~~h----------------~~~v~~i~~sp~~~~~l~s~~ 341 (430)
T 2xyi_A 279 EVNCLSFNPYSEFILATGSADKTVALWDLRNLK-LKLHSFESH----------------KDEIFQVQWSPHNETILASSG 341 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCTT-SCSEEEECC----------------SSCEEEEEECSSCTTEEEEEE
T ss_pred CeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC-CCeEEeecC----------------CCCEEEEEECCCCCCEEEEEe
Confidence 477888888775 77777777888888876311 123333221 1124679999988 4787777
Q ss_pred CCCEEEEEc-CC-C-c-----------EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCe-EEEEECCCCeEEEE
Q 014345 100 MNMAIRKIS-DS-G-V-----------TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCS-LLVIDRGNRAIREI 164 (426)
Q Consensus 100 ~N~rIrk~d-~g-~-V-----------stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~-LYVaDsgN~rIr~I 164 (426)
.+++|+.++ .. + . ..+.-- ...-..+.+++ +.+++. ++++-...+.|+.+
T Consensus 342 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~--------------~~h~~~v~~~~-~~p~~~~~l~s~s~dg~i~iw 406 (430)
T 2xyi_A 342 TDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIH--------------GGHTAKISDFS-WNPNEPWIICSVSEDNIMQVW 406 (430)
T ss_dssp TTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEEC--------------CCCSSCEEEEE-ECSSSTTEEEEEETTSEEEEE
T ss_pred CCCcEEEEeCCCCccccCccccccCCcceEEEc--------------CCCCCCceEEE-ECCCCCCEEEEEECCCCEEEe
Confidence 788888888 22 1 1 111100 00112467788 566676 88888888999988
Q ss_pred EcCC
Q 014345 165 QLHF 168 (426)
Q Consensus 165 ~l~~ 168 (426)
++..
T Consensus 407 ~~~~ 410 (430)
T 2xyi_A 407 QMAE 410 (430)
T ss_dssp EECH
T ss_pred Eccc
Confidence 8754
No 199
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=91.74 E-value=3.1 Score=44.59 Aligned_cols=126 Identities=10% Similarity=0.019 Sum_probs=77.1
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
....|+.|++|.|||+.. +.|.+++.++. .. .+.... .. .+. .-+...+|+.|++|+|||+-..
T Consensus 499 ~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~---~~-~~~~~~-~~----~~l----~~~~i~~i~~d~~g~lWigT~~- 562 (795)
T 4a2l_A 499 QITTLFRDSHKRLWIGGE--EGLSVFKQEGL---DI-QKASIL-PV----SNV----TKLFTNCIYEASNGIIWVGTRE- 562 (795)
T ss_dssp CEEEEEECTTCCEEEEES--SCEEEEEEETT---EE-EECCCS-CS----CGG----GGSCEEEEEECTTSCEEEEESS-
T ss_pred eEEEEEECCCCCEEEEeC--CceEEEeCCCC---eE-EEecCC-CC----CCC----CCCeeEEEEECCCCCEEEEeCC-
Confidence 467889999999999986 56888887642 22 221100 00 110 1234578999999999999763
Q ss_pred CEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEe-ecCCC
Q 014345 102 MAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAY-QYGSS 178 (426)
Q Consensus 102 ~rIrk~d-~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~~-~~~~g 178 (426)
-|.+++ ... +..+ ... +|.... ...+|+ .|.+|+|||+- ++-|.++++....+.. ....|
T Consensus 563 -Gl~~~d~~~~~~~~~-~~~--------~gl~~~----~i~~i~-~d~~g~lWi~t--~~Gl~~~~~~~~~~~~~~~~dG 625 (795)
T 4a2l_A 563 -GFYCFNEKDKQIKRY-NTT--------NGLPNN----VVYGIL-EDSFGRLWLST--NRGISCFNPETEKFRNFTESDG 625 (795)
T ss_dssp -CEEEEETTTTEEEEE-CGG--------GTCSCS----CEEEEE-ECTTSCEEEEE--TTEEEEEETTTTEEEEECGGGT
T ss_pred -CceeECCCCCcEEEe-CCC--------CCCchh----heEEEE-ECCCCCEEEEc--CCceEEEcCCCCcEEEcCCcCC
Confidence 588888 333 3333 211 111111 234566 78899999998 4678999988766543 33334
Q ss_pred Cc
Q 014345 179 FP 180 (426)
Q Consensus 179 ~P 180 (426)
+|
T Consensus 626 l~ 627 (795)
T 4a2l_A 626 LQ 627 (795)
T ss_dssp CS
T ss_pred Cc
Confidence 44
No 200
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=91.53 E-value=2.4 Score=39.22 Aligned_cols=117 Identities=10% Similarity=0.012 Sum_probs=65.1
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCC--CCEEEEEC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR--GNIYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~d--G~LYVADt 99 (426)
.-.+|+++++|.++++-..++.|..++.+......+..+.+. . ..-..|++.++ ++++++-.
T Consensus 13 ~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h--------~--------~~v~~~~~~~~~~~~~l~s~~ 76 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGH--------E--------GPVWRVDWAHPKFGTILASCS 76 (379)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCC--------S--------SCEEEEEECCGGGCSEEEEEE
T ss_pred cEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCC--------C--------CcEEEEEeCCCCCCCEEEEec
Confidence 467899999999777777788888887753210111222221 1 12356777765 77766666
Q ss_pred CCCEEEEEc--CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCC--CeEEEEECCCCeEEEEEcCCC
Q 014345 100 MNMAIRKIS--DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSS--CSLLVIDRGNRAIREIQLHFD 169 (426)
Q Consensus 100 ~N~rIrk~d--~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~--G~LYVaDsgN~rIr~I~l~~~ 169 (426)
.++.|+.++ .+....+.--. ++ -.....++ +.++ +.++++-..++.|+.+++...
T Consensus 77 ~dg~v~iwd~~~~~~~~~~~~~-----~~---------~~~v~~~~-~~~~~~~~~l~~~~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 77 YDGKVLIWKEENGRWSQIAVHA-----VH---------SASVNSVQ-WAPHEYGPLLLVASSDGKVSVVEFKEN 135 (379)
T ss_dssp TTSCEEEEEEETTEEEEEEEEC-----CC---------SSCEEEEE-ECCGGGCSEEEEEETTSEEEEEECCTT
T ss_pred cCCEEEEEEcCCCceeEeeeec-----CC---------CcceEEEE-eCCCCCCCEEEEecCCCcEEEEecCCC
Confidence 677788877 44322211100 00 01234555 3444 555555555677777776543
No 201
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=91.50 E-value=3.8 Score=43.88 Aligned_cols=131 Identities=11% Similarity=0.024 Sum_probs=77.6
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
...+|+.|++|+|||+-. +.|.+++.+. ++...+.... . ... -.-+....|+.|++|+|||+-.
T Consensus 453 ~v~~i~~d~~g~lwigt~--~Gl~~~~~~~---~~~~~~~~~~-----~-~~~---~~~~~i~~i~~d~~g~lWigt~-- 516 (795)
T 4a2l_A 453 NVYAILPDGEGNLWLGTL--SALVRFNPEQ---RSFTTIEKEK-----D-GTP---VVSKQITTLFRDSHKRLWIGGE-- 516 (795)
T ss_dssp CEEEEEECSSSCEEEEES--SCEEEEETTT---TEEEECCBCT-----T-CCB---CCCCCEEEEEECTTCCEEEEES--
T ss_pred eeEEEEECCCCCEEEEec--CceeEEeCCC---CeEEEccccc-----c-ccc---cCCceEEEEEECCCCCEEEEeC--
Confidence 467888899999999875 4688898864 2333322110 0 000 0013457899999999999987
Q ss_pred CEEEEEc-C-CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEe-ecCCC
Q 014345 102 MAIRKIS-D-SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAY-QYGSS 178 (426)
Q Consensus 102 ~rIrk~d-~-g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~~-~~~~g 178 (426)
+-|.+++ . +.+ .+.... . ..+. .-....+|+ .|.+|.|||+-.+ .|.+++........ ....+
T Consensus 517 ~Gl~~~~~~~~~~-~~~~~~-~-----~~~l----~~~~i~~i~-~d~~g~lWigT~~--Gl~~~d~~~~~~~~~~~~~g 582 (795)
T 4a2l_A 517 EGLSVFKQEGLDI-QKASIL-P-----VSNV----TKLFTNCIY-EASNGIIWVGTRE--GFYCFNEKDKQIKRYNTTNG 582 (795)
T ss_dssp SCEEEEEEETTEE-EECCCS-C-----SCGG----GGSCEEEEE-ECTTSCEEEEESS--CEEEEETTTTEEEEECGGGT
T ss_pred CceEEEeCCCCeE-EEecCC-C-----CCCC----CCCeeEEEE-ECCCCCEEEEeCC--CceeECCCCCcEEEeCCCCC
Confidence 4577777 3 334 322100 0 0010 012345666 7899999998864 68889987665543 33334
Q ss_pred Ccce
Q 014345 179 FPLG 182 (426)
Q Consensus 179 ~P~G 182 (426)
+|..
T Consensus 583 l~~~ 586 (795)
T 4a2l_A 583 LPNN 586 (795)
T ss_dssp CSCS
T ss_pred Cchh
Confidence 5543
No 202
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=91.39 E-value=1.4 Score=45.55 Aligned_cols=118 Identities=10% Similarity=0.052 Sum_probs=68.8
Q ss_pred ceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCCC
Q 014345 23 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 102 (426)
Q Consensus 23 P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N~ 102 (426)
+..+++++||.++++-...+.|+.++..+. .+..+.-. ++ -.....|++.++|.++++-..++
T Consensus 451 v~~va~spdg~~lasgs~D~~v~lwd~~~~---~~~~~~~~-----~h---------~~~v~~v~fspdg~~las~s~d~ 513 (611)
T 1nr0_A 451 SSCVALSNDKQFVAVGGQDSKVHVYKLSGA---SVSEVKTI-----VH---------PAEITSVAFSNNGAFLVATDQSR 513 (611)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEEEETT---EEEEEEEE-----EC---------SSCEEEEEECTTSSEEEEEETTS
T ss_pred ceEEEEeCCCCEEEEeCCCCeEEEEEccCC---ceeeeecc-----CC---------CCceEEEEECCCCCEEEEEcCCC
Confidence 456666666666666556666666655431 11111000 00 11356899999999888877788
Q ss_pred EEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCc
Q 014345 103 AIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDD 170 (426)
Q Consensus 103 rIrk~d-~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~ 170 (426)
.|+.++ ......+.-...+ ++ -..-++|+ +.++|.++++-...+.|+.+++....
T Consensus 514 ~v~~w~~~~~~~~~~~~~~~---~H---------~~~V~~v~-fspdg~~lasgs~D~~v~lW~~~~~~ 569 (611)
T 1nr0_A 514 KVIPYSVANNFELAHTNSWT---FH---------TAKVACVS-WSPDNVRLATGSLDNSVIVWNMNKPS 569 (611)
T ss_dssp CEEEEEGGGTTEESCCCCCC---CC---------SSCEEEEE-ECTTSSEEEEEETTSCEEEEETTCTT
T ss_pred CEEEEEcCCCCceeeeeeee---ec---------ccceeEEE-ECCCCCEEEEEECCCcEEEEECCCcc
Confidence 898888 3211111100000 01 11346777 57888888887788999999987543
No 203
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=90.61 E-value=12 Score=35.74 Aligned_cols=73 Identities=12% Similarity=-0.014 Sum_probs=44.6
Q ss_pred cceEEEcCCCCEEEEECCCCEEEEEc-C-CC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEEC--C
Q 014345 83 PKGLTVDDRGNIYIADTMNMAIRKIS-D-SG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDR--G 157 (426)
Q Consensus 83 P~GIaVd~dG~LYVADt~N~rIrk~d-~-g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDs--g 157 (426)
..++++.++|.++++-..++.|+.++ . +. +.++.+.. .....+++......|+++-. .
T Consensus 220 v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~-----------------~~v~~~~~~p~~~~ll~~~~gs~ 282 (401)
T 4aez_A 220 VCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHN-----------------AAVKAVAWCPWQSNLLATGGGTM 282 (401)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCS-----------------SCCCEEEECTTSTTEEEEECCTT
T ss_pred eeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCc-----------------ceEEEEEECCCCCCEEEEecCCC
Confidence 56889999998888777778899999 3 33 23333210 12355664333445666543 4
Q ss_pred CCeEEEEEcCCCceE
Q 014345 158 NRAIREIQLHFDDCA 172 (426)
Q Consensus 158 N~rIr~I~l~~~~~~ 172 (426)
++.|+.+++....+.
T Consensus 283 d~~i~i~d~~~~~~~ 297 (401)
T 4aez_A 283 DKQIHFWNAATGARV 297 (401)
T ss_dssp TCEEEEEETTTCCEE
T ss_pred CCEEEEEECCCCCEE
Confidence 677777777655443
No 204
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=90.50 E-value=8.7 Score=36.66 Aligned_cols=142 Identities=11% Similarity=0.119 Sum_probs=78.9
Q ss_pred CceEEEEcCCC-cEEEEECCCCeEEEEeCCCCcc-c-ccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEE
Q 014345 22 EPYSVEVLPGG-ELLILDSANSNLYRISSSLSLY-S-RPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIAD 98 (426)
Q Consensus 22 ~P~GIaVd~dG-~LYVaD~~n~rI~kid~dg~~~-g-~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVAD 98 (426)
....++++++| +++++-...+.|..++...... . .+..+.+.... . ...........-..|+++++|.++++-
T Consensus 228 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~v~~~~~s~~g~~l~~~ 303 (447)
T 3dw8_B 228 VITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDP--S--NRSFFSEIISSISDVKFSHSGRYMMTR 303 (447)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC---------CCHHHHHTTCEEEEEECTTSSEEEEE
T ss_pred ceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCc--c--ccccccccCceEEEEEECCCCCEEEEe
Confidence 47899999998 8888877888999998764220 0 02333322100 0 000000011235789999999877776
Q ss_pred CCCCEEEEEc-C--CC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 014345 99 TMNMAIRKIS-D--SG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 171 (426)
Q Consensus 99 t~N~rIrk~d-~--g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~ 171 (426)
.. +.|+.++ . +. +.++.+..... .. .........+.....++ +.+++.++++-..++.|+.+++....+
T Consensus 304 ~~-~~v~iwd~~~~~~~~~~~~~~~~~~-~~-l~~~~~~~~i~~~~~~~-~s~~~~~l~s~s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 304 DY-LSVKVWDLNMENRPVETYQVHEYLR-SK-LCSLYENDCIFDKFECC-WNGSDSVVMTGSYNNFFRMFDRNTKRD 376 (447)
T ss_dssp ES-SEEEEEETTCCSSCSCCEESCGGGT-TT-HHHHHHTSGGGCCCCEE-ECTTSSEEEEECSTTEEEEEETTTCCE
T ss_pred eC-CeEEEEeCCCCccccceeecccccc-cc-ccccccccccccceEEE-ECCCCCEEEEeccCCEEEEEEcCCCcc
Confidence 66 8999998 3 33 44444421100 00 00000001111223466 577787778777889999998876443
No 205
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=90.44 E-value=4.1 Score=45.38 Aligned_cols=116 Identities=9% Similarity=0.038 Sum_probs=73.0
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
.-.+++++++|.++++-...+.|..++..... .+..+.+. -.....++++++|++.++-..+
T Consensus 617 ~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~--~~~~~~~h----------------~~~v~~~~~s~~~~~l~s~~~d 678 (1249)
T 3sfz_A 617 AVYHACFSQDGQRIASCGADKTLQVFKAETGE--KLLDIKAH----------------EDEVLCCAFSSDDSYIATCSAD 678 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCC--EEEEECCC----------------SSCEEEEEECTTSSEEEEEETT
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEECCCCC--EEEEeccC----------------CCCEEEEEEecCCCEEEEEeCC
Confidence 46789999999988877788899999887421 22333221 1124679999999888777778
Q ss_pred CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECC-CCeEEEEECCCCeEEEEEcCCCceE
Q 014345 102 MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGS-SCSLLVIDRGNRAIREIQLHFDDCA 172 (426)
Q Consensus 102 ~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~-~G~LYVaDsgN~rIr~I~l~~~~~~ 172 (426)
+.|+.++ ++. +.++.+... ....+++.+. ++.++++-..++.|+.+++....+.
T Consensus 679 ~~v~vwd~~~~~~~~~~~~~~~-----------------~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~ 736 (1249)
T 3sfz_A 679 KKVKIWDSATGKLVHTYDEHSE-----------------QVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECR 736 (1249)
T ss_dssp SEEEEEETTTCCEEEEEECCSS-----------------CEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEE
T ss_pred CeEEEEECCCCceEEEEcCCCC-----------------cEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchh
Confidence 8999999 444 344443110 1234443222 3445556556677777776655443
No 206
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=90.21 E-value=4.5 Score=39.55 Aligned_cols=121 Identities=12% Similarity=0.043 Sum_probs=74.1
Q ss_pred CceEEEEcCC-CcEEEEECCCCeEEEEeCCCCc--------ccccEEEecCCCCcccccCCcccccccCCcceEEEcCCC
Q 014345 22 EPYSVEVLPG-GELLILDSANSNLYRISSSLSL--------YSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG 92 (426)
Q Consensus 22 ~P~GIaVd~d-G~LYVaD~~n~rI~kid~dg~~--------~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG 92 (426)
.+..|++.++ +.++++-..++.|..++..... ...+..+.+. -....+|++++++
T Consensus 130 ~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h----------------~~~v~~l~~~~~~ 193 (430)
T 2xyi_A 130 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGH----------------QKEGYGLSWNPNL 193 (430)
T ss_dssp CCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECC----------------SSCCCCEEECTTS
T ss_pred cEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCC----------------CCCeEEEEeCCCC
Confidence 6889999996 6788887778889888775310 0112222221 1135789999988
Q ss_pred C-EEEEECCCCEEEEEc-CC-C-c-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 014345 93 N-IYIADTMNMAIRKIS-DS-G-V-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 167 (426)
Q Consensus 93 ~-LYVADt~N~rIrk~d-~g-~-V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~ 167 (426)
. ++++-..++.|+.++ .. . . ..+...... .+ .-....+|++...++.++++...++.|+.+++.
T Consensus 194 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~--~~---------h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~ 262 (430)
T 2xyi_A 194 NGYLLSASDDHTICLWDINATPKEHRVIDAKNIF--TG---------HTAVVEDVAWHLLHESLFGSVADDQKLMIWDTR 262 (430)
T ss_dssp TTEEEEECTTSCEEEEETTSCCBGGGEEECSEEE--CC---------CSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred CCeEEEEeCCCeEEEEeCCCCCCCCceeccceee--cC---------CCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECC
Confidence 7 777777788899888 32 1 1 111100000 00 111346677543367888888888999999987
Q ss_pred CC
Q 014345 168 FD 169 (426)
Q Consensus 168 ~~ 169 (426)
..
T Consensus 263 ~~ 264 (430)
T 2xyi_A 263 NN 264 (430)
T ss_dssp CS
T ss_pred CC
Confidence 53
No 207
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=90.21 E-value=14 Score=38.00 Aligned_cols=139 Identities=13% Similarity=0.015 Sum_probs=79.9
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCC-CCcccccCCcccccccCCcceEEEcCCCCEEEEECC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSA-EGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 100 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~-~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~ 100 (426)
...+|++.++|.++++-...+.|+.++... +......... ....++ -....+|+++++|.++++-..
T Consensus 192 ~V~~v~fspdg~~las~s~D~~i~lwd~~~---g~~~~~~~~~~~~~~~h---------~~~V~~v~~spdg~~l~s~s~ 259 (611)
T 1nr0_A 192 FVHSVRYNPDGSLFASTGGDGTIVLYNGVD---GTKTGVFEDDSLKNVAH---------SGSVFGLTWSPDGTKIASASA 259 (611)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTT---CCEEEECBCTTSSSCSS---------SSCEEEEEECTTSSEEEEEET
T ss_pred ceEEEEECCCCCEEEEEECCCcEEEEECCC---CcEeeeecccccccccc---------CCCEEEEEECCCCCEEEEEeC
Confidence 467899999999888888888999998653 2222221110 000011 123578999999998888777
Q ss_pred CCEEEEEc--CCC-cEEEeCCccCC--------C-----CCCCCCC-------------cccccCCCCCeeEEECCCCeE
Q 014345 101 NMAIRKIS--DSG-VTTIAGGKWGR--------G-----GGHVDGP-------------SEDAKFSNDFDVVYIGSSCSL 151 (426)
Q Consensus 101 N~rIrk~d--~g~-VstIaGg~~g~--------~-----~G~~dG~-------------~~~a~f~~P~gIa~vd~~G~L 151 (426)
++.|+.++ .+. +.++..+.... . .+..+|. .....-....+|+ +.++|.+
T Consensus 260 D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~-~spdg~~ 338 (611)
T 1nr0_A 260 DKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALS-SSADGKT 338 (611)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEE-ECTTSSE
T ss_pred CCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEE-EeCCCCE
Confidence 88999998 333 33332210000 0 0000000 0001112345676 4677777
Q ss_pred EEEECCCCeEEEEEcCCCceEe
Q 014345 152 LVIDRGNRAIREIQLHFDDCAY 173 (426)
Q Consensus 152 YVaDsgN~rIr~I~l~~~~~~~ 173 (426)
+++-...+.|+.+++....+..
T Consensus 339 l~s~s~D~~v~~Wd~~~~~~~~ 360 (611)
T 1nr0_A 339 LFSADAEGHINSWDISTGISNR 360 (611)
T ss_dssp EEEEETTSCEEEEETTTCCEEE
T ss_pred EEEEeCCCcEEEEECCCCceee
Confidence 7776677899999987655543
No 208
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=90.20 E-value=12 Score=35.03 Aligned_cols=112 Identities=11% Similarity=0.052 Sum_probs=66.6
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCC---------
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG--------- 92 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG--------- 92 (426)
.-.+++++++|+++++-...+.|..++..+.. ..... .. .++ -..-..+++.+++
T Consensus 120 ~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~---~~~~~-~~---~~~---------~~~v~~~~~~~~~~~~~~~~~~ 183 (343)
T 2xzm_R 120 EVYSVAFSPDNRQILSAGAEREIKLWNILGEC---KFSSA-EK---ENH---------SDWVSCVRYSPIMKSANKVQPF 183 (343)
T ss_dssp CEEEEEECSSTTEEEEEETTSCEEEEESSSCE---EEECC-TT---TSC---------SSCEEEEEECCCCCSCSCCCSS
T ss_pred cEEEEEECCCCCEEEEEcCCCEEEEEeccCCc---eeeee-cc---cCC---------CceeeeeeeccccccccccCCC
Confidence 46788899988877776677888888876321 11111 00 011 0112345555554
Q ss_pred -CEEEEECCCCEEEEEcC-CCc-EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 014345 93 -NIYIADTMNMAIRKISD-SGV-TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 167 (426)
Q Consensus 93 -~LYVADt~N~rIrk~d~-g~V-stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~ 167 (426)
.++++-..++.|+.++. ... .++.+-. .....|+ +.++|.++++-...+.|+.+++.
T Consensus 184 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~-----------------~~v~~~~-~s~~g~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 184 APYFASVGWDGRLKVWNTNFQIRYTFKAHE-----------------SNVNHLS-ISPNGKYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp CCEEEEEETTSEEEEEETTTEEEEEEECCS-----------------SCEEEEE-ECTTSSEEEEEETTCEEEEEESS
T ss_pred CCEEEEEcCCCEEEEEcCCCceeEEEcCcc-----------------ccceEEE-ECCCCCEEEEEcCCCeEEEEECC
Confidence 56666666788888883 322 2332210 1235666 57788888877778899999874
No 209
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=90.12 E-value=12 Score=37.15 Aligned_cols=121 Identities=6% Similarity=-0.012 Sum_probs=72.3
Q ss_pred CceEEEEcCCCc-EEEEECCCCeEEEEeCCCCccccc-EEEecCCCCcccccCCcccccccCCcceEEEcCC-CCEEEEE
Q 014345 22 EPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRP-KLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR-GNIYIAD 98 (426)
Q Consensus 22 ~P~GIaVd~dG~-LYVaD~~n~rI~kid~dg~~~g~v-~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~d-G~LYVAD 98 (426)
...++++.++|. ++++-...+.|..++... ++. ..+.+.. .. -.....+++.++ |+++++-
T Consensus 162 ~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~---~~~~~~~~~~~-------~~------~~~v~~~~~~~~~~~~l~~~ 225 (615)
T 1pgu_A 162 RINACHLKQSRPMRSMTVGDDGSVVFYQGPP---FKFSASDRTHH-------KQ------GSFVRDVEFSPDSGEFVITV 225 (615)
T ss_dssp CEEEEEECSSSSCEEEEEETTTEEEEEETTT---BEEEEEECSSS-------CT------TCCEEEEEECSTTCCEEEEE
T ss_pred cEEEEEECCCCCcEEEEEeCCCcEEEEeCCC---cceeeeecccC-------CC------CceEEEEEECCCCCCEEEEE
Confidence 467899999887 677777788999998763 222 2222210 00 002468999999 9877777
Q ss_pred CCCCEEEEEc--CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceE
Q 014345 99 TMNMAIRKIS--DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCA 172 (426)
Q Consensus 99 t~N~rIrk~d--~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~ 172 (426)
..++.|+.++ .+.......... .+ .-.....+++ . ++.++++-..++.|+.+++....+.
T Consensus 226 ~~dg~i~vwd~~~~~~~~~~~~~~---~~---------~~~~v~~~~~-~-~~~~l~~~~~d~~i~~wd~~~~~~~ 287 (615)
T 1pgu_A 226 GSDRKISCFDGKSGEFLKYIEDDQ---EP---------VQGGIFALSW-L-DSQKFATVGADATIRVWDVTTSKCV 287 (615)
T ss_dssp ETTCCEEEEETTTCCEEEECCBTT---BC---------CCSCEEEEEE-S-SSSEEEEEETTSEEEEEETTTTEEE
T ss_pred eCCCeEEEEECCCCCEeEEecccc---cc---------cCCceEEEEE-c-CCCEEEEEcCCCcEEEEECCCCcEE
Confidence 6788899998 344322221000 00 0012345664 4 6666666666778888887755443
No 210
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=90.09 E-value=1.1 Score=42.16 Aligned_cols=113 Identities=9% Similarity=0.002 Sum_probs=66.1
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCc-ccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSL-YSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 100 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~-~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~ 100 (426)
.-.++++.++|+++++-...+.|..++..... ......+.+. -.....|++.++|+++++-..
T Consensus 57 ~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~l~~~~~ 120 (377)
T 3dwl_C 57 IVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRL----------------NRAATFVRWSPNEDKFAVGSG 120 (377)
T ss_dssp CEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCC----------------SSCEEEEECCTTSSCCEEEES
T ss_pred eEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEeccc----------------CCceEEEEECCCCCEEEEEec
Confidence 46788999998877776677888888776321 0011111111 112467888888886666666
Q ss_pred CCEEEEEc--CCC----cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 014345 101 NMAIRKIS--DSG----VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 167 (426)
Q Consensus 101 N~rIrk~d--~g~----VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~ 167 (426)
++.|+.++ .+. +..+.+.. -.....|+ +.+++.++++-..++.|+.+++.
T Consensus 121 d~~i~iwd~~~~~~~~~~~~~~~~h----------------~~~v~~~~-~~~~~~~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 121 ARVISVCYFEQENDWWVSKHLKRPL----------------RSTILSLD-WHPNNVLLAAGCADRKAYVLSAY 176 (377)
T ss_dssp SSCEEECCC-----CCCCEEECSSC----------------CSCEEEEE-ECTTSSEEEEEESSSCEEEEEEC
T ss_pred CCeEEEEEECCcccceeeeEeeccc----------------CCCeEEEE-EcCCCCEEEEEeCCCEEEEEEEE
Confidence 77888887 222 23333210 11345677 46677777776667889999875
No 211
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=90.04 E-value=3.6 Score=38.87 Aligned_cols=121 Identities=9% Similarity=0.050 Sum_probs=74.3
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCccc--ccEEEecCCCCcccccCCcccccccCCcceEEEcCC-CCEEEEE
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYS--RPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR-GNIYIAD 98 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g--~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~d-G~LYVAD 98 (426)
...+++++++|.++++-..++.|..++......+ .+..+.+. -.....|++.++ ++++++-
T Consensus 69 ~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h----------------~~~v~~~~~~~~~~~~l~s~ 132 (416)
T 2pm9_A 69 KFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNH----------------SSSVKTVKFNAKQDNVLASG 132 (416)
T ss_dssp CEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCS----------------SSCCCEEEECSSSTTBEEEE
T ss_pred ceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCC----------------ccceEEEEEcCCCCCEEEEE
Confidence 4678999999987777667788999888641111 11222111 112467999987 7888777
Q ss_pred CCCCEEEEEc-CCCc------EEE-eCCccCCCCCCCCCCcccccCCCCCeeEEECCC-CeEEEEECCCCeEEEEEcCCC
Q 014345 99 TMNMAIRKIS-DSGV------TTI-AGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSS-CSLLVIDRGNRAIREIQLHFD 169 (426)
Q Consensus 99 t~N~rIrk~d-~g~V------stI-aGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~-G~LYVaDsgN~rIr~I~l~~~ 169 (426)
..++.|+.++ ...- ..+ .... ...-.....+++ .++ +.++++-..++.|+.+++...
T Consensus 133 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~-------------~~~~~~v~~~~~-~~~~~~~l~~~~~dg~v~iwd~~~~ 198 (416)
T 2pm9_A 133 GNNGEIFIWDMNKCTESPSNYTPLTPGQS-------------MSSVDEVISLAW-NQSLAHVFASAGSSNFASIWDLKAK 198 (416)
T ss_dssp CSSSCEEBCBTTTTSSCTTTCCCBCCCCS-------------CCSSCCCCEEEE-CSSCTTEEEEESSSSCEEEEETTTT
T ss_pred cCCCeEEEEECCCCccccccccccccccc-------------cCCCCCeeEEEe-CCCCCcEEEEEcCCCCEEEEECCCC
Confidence 7788899888 2221 111 0000 001123467774 555 677777777888999998775
Q ss_pred ceE
Q 014345 170 DCA 172 (426)
Q Consensus 170 ~~~ 172 (426)
.+.
T Consensus 199 ~~~ 201 (416)
T 2pm9_A 199 KEV 201 (416)
T ss_dssp EEE
T ss_pred Ccc
Confidence 554
No 212
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=90.01 E-value=6.7 Score=36.07 Aligned_cols=112 Identities=8% Similarity=0.034 Sum_probs=66.2
Q ss_pred ceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC--CCCEEEEECC
Q 014345 23 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD--RGNIYIADTM 100 (426)
Q Consensus 23 P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~--dG~LYVADt~ 100 (426)
-..++++++|.++++-...+.|..++.++.....+.++.|. .+ .-..|++.+ +|+++++=..
T Consensus 12 V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH--------~~--------~V~~v~~s~~~~g~~l~s~s~ 75 (297)
T 2pm7_B 12 IHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGH--------EG--------PVWRVDWAHPKFGTILASCSY 75 (297)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCC--------SS--------CEEEEEECCGGGCSEEEEEET
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccc--------cC--------CeEEEEecCCCcCCEEEEEcC
Confidence 56899999999888888888899888763211122333322 11 124677754 3777777777
Q ss_pred CCEEEEEc--CCC---cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCC--CeEEEEECCCCeEEEEEcCC
Q 014345 101 NMAIRKIS--DSG---VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSS--CSLLVIDRGNRAIREIQLHF 168 (426)
Q Consensus 101 N~rIrk~d--~g~---VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~--G~LYVaDsgN~rIr~I~l~~ 168 (426)
++.|+.++ .+. +.++.+.. .....+++ .++ +.++++-...+.|+.+++..
T Consensus 76 D~~v~iWd~~~~~~~~~~~~~~h~-----------------~~v~~v~~-~p~~~g~~l~s~s~d~~v~~wd~~~ 132 (297)
T 2pm7_B 76 DGKVMIWKEENGRWSQIAVHAVHS-----------------ASVNSVQW-APHEYGPMLLVASSDGKVSVVEFKE 132 (297)
T ss_dssp TTEEEEEEBSSSCBCCCEEECCCS-----------------SCEEEEEE-CCGGGCSEEEEEETTSEEEEEEBCS
T ss_pred CCEEEEEEcCCCceEEEEEeecCC-----------------CceeEEEe-CcCCCCcEEEEEECCCcEEEEEecC
Confidence 78888888 332 22332210 01245553 333 55555555667787777654
No 213
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=89.96 E-value=10 Score=33.85 Aligned_cols=110 Identities=13% Similarity=0.069 Sum_probs=67.7
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
....+++.++|.| ++-...+.|..++..... .+..+.+. -.....|+++++|.|+.+. .+
T Consensus 186 ~i~~~~~~~~~~~-~~~~~dg~i~i~d~~~~~--~~~~~~~~----------------~~~i~~~~~~~~~~l~~~~-~d 245 (313)
T 3odt_A 186 VVRHLAVVDDGHF-ISCSNDGLIKLVDMHTGD--VLRTYEGH----------------ESFVYCIKLLPNGDIVSCG-ED 245 (313)
T ss_dssp CEEEEEEEETTEE-EEEETTSEEEEEETTTCC--EEEEEECC----------------SSCEEEEEECTTSCEEEEE-TT
T ss_pred cEEEEEEcCCCeE-EEccCCCeEEEEECCchh--hhhhhhcC----------------CceEEEEEEecCCCEEEEe-cC
Confidence 4678888888884 444467788888876321 12222221 1125689999998766555 47
Q ss_pred CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCc
Q 014345 102 MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDD 170 (426)
Q Consensus 102 ~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~ 170 (426)
+.|+.++ .+. +.++.+.. .....++ ..+++.|+++. .++.|+.+++....
T Consensus 246 g~v~iwd~~~~~~~~~~~~~~-----------------~~i~~~~-~~~~~~~~~~~-~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 246 RTVRIWSKENGSLKQVITLPA-----------------ISIWSVD-CMSNGDIIVGS-SDNLVRIFSQEKSR 298 (313)
T ss_dssp SEEEEECTTTCCEEEEEECSS-----------------SCEEEEE-ECTTSCEEEEE-TTSCEEEEESCGGG
T ss_pred CEEEEEECCCCceeEEEeccC-----------------ceEEEEE-EccCCCEEEEe-CCCcEEEEeCCCCc
Confidence 8899999 444 34443310 1235666 56777765554 46889999877543
No 214
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=89.96 E-value=3.5 Score=39.43 Aligned_cols=72 Identities=11% Similarity=0.166 Sum_probs=41.4
Q ss_pred cceEEEcCC-CCEEEEECCCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEECC
Q 014345 83 PKGLTVDDR-GNIYIADTMNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDRG 157 (426)
Q Consensus 83 P~GIaVd~d-G~LYVADt~N~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaDsg 157 (426)
+..|++.++ +.++++-..++.|+.++ .+. +.++.+.. ..-..|++ .+++ .++++-..
T Consensus 229 v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~-----------------~~v~~l~~-sp~~~~~lasgs~ 290 (357)
T 4g56_B 229 PTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHS-----------------QNITGLAY-SYHSSPFLASISE 290 (357)
T ss_dssp EEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCS-----------------SCEEEEEE-CSSSSCCEEEEET
T ss_pred ccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccc-----------------eeEEEEEE-cCCCCCEEEEEeC
Confidence 567888876 46776655678888888 333 44554311 01245553 3333 45555555
Q ss_pred CCeEEEEEcCCCceE
Q 014345 158 NRAIREIQLHFDDCA 172 (426)
Q Consensus 158 N~rIr~I~l~~~~~~ 172 (426)
++.|+.+++....+.
T Consensus 291 D~~i~iwd~~~~~~~ 305 (357)
T 4g56_B 291 DCTVAVLDADFSEVF 305 (357)
T ss_dssp TSCEEEECTTSCEEE
T ss_pred CCEEEEEECCCCcEe
Confidence 667777776654443
No 215
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=89.69 E-value=1.5 Score=44.81 Aligned_cols=114 Identities=10% Similarity=-0.037 Sum_probs=64.0
Q ss_pred eEEEEcCCCcEEEE---ECCC-CeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCC-EEEEE
Q 014345 24 YSVEVLPGGELLIL---DSAN-SNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIAD 98 (426)
Q Consensus 24 ~GIaVd~dG~LYVa---D~~n-~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LYVAD 98 (426)
..++++|||..++. |..+ ..|++++.++ +....+.+.. + ....+++.+||+ |+.++
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~---g~~~~l~~~~--------~--------~~~~~~~SpDG~~l~~~~ 213 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSS---GGLRVFDSGE--------G--------SFSSASISPGMKVTAGLE 213 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTT---CCCEEECCSS--------C--------EEEEEEECTTSCEEEEEE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCC---CCceEeecCC--------C--------ccccceECCCCCEEEEcc
Confidence 67889999985552 2122 5688898765 4455553321 1 126789999998 44444
Q ss_pred CCC-CEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEc
Q 014345 99 TMN-MAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQL 166 (426)
Q Consensus 99 t~N-~rIrk~d-~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l 166 (426)
..+ ..|+.++ +++ .. +..+.... ..... -..+...+ ++++|.||++-..+++++.+..
T Consensus 214 ~~~~~~i~~~d~~~~~~~-~~~~~~~~----~~~~~----~~~~~~~~-~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 214 TAREARLVTVDPRDGSVE-DLELPSKD----FSSYR----PTAITWLG-YLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp CSSCEEEEEECTTTCCEE-ECCCSCSH----HHHHC----CSEEEEEE-ECTTSCEEEEEEETTEEEEEET
T ss_pred CCCeeEEEEEcCCCCcEE-EccCCCcC----hhhhh----hcccccee-EcCCCcEEEEEEcCCcEEEEEE
Confidence 432 3899998 444 44 33211000 00000 00112223 4677888887777788888877
No 216
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=89.62 E-value=5.1 Score=39.24 Aligned_cols=117 Identities=10% Similarity=0.047 Sum_probs=71.4
Q ss_pred CceEEEEcCCCcE-EEEECCCCeEEEEeCC--CCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEE
Q 014345 22 EPYSVEVLPGGEL-LILDSANSNLYRISSS--LSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIAD 98 (426)
Q Consensus 22 ~P~GIaVd~dG~L-YVaD~~n~rI~kid~d--g~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVAD 98 (426)
...+++++++|.. +++-...+.|..++.. .. ..+..+.+.. . -..+..|+++++|..+++-
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~--~~~~~~~~~~-----~---------~~~v~~~~~sp~~~~l~~~ 167 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSK--NVLKLRKRFC-----F---------SKRPNAISIAEDDTTVIIA 167 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSS--SCEEEEEEEE-----C---------SSCEEEEEECTTSSEEEEE
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCC--ceeeeeeccc-----C---------CCCceEEEEcCCCCEEEEE
Confidence 4689999999986 4776677888888765 32 1223332110 0 1236789999998755554
Q ss_pred CCCCEEEEEc--CCCcE-----EEeCCccCCCCCCCCCCcccccCCCCCeeEEECCC---CeEEEEECCCCeEEEEEcCC
Q 014345 99 TMNMAIRKIS--DSGVT-----TIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSS---CSLLVIDRGNRAIREIQLHF 168 (426)
Q Consensus 99 t~N~rIrk~d--~g~Vs-----tIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~---G~LYVaDsgN~rIr~I~l~~ 168 (426)
..++.|+.++ ++... ++.+ ......+|++ .++ +.++++-...+.|+.+++..
T Consensus 168 ~~~g~v~~~~~~~~~~~~~~~~~~~~-----------------h~~~v~~~~~-sp~~~~~~~l~s~~~d~~i~vwd~~~ 229 (450)
T 2vdu_B 168 DKFGDVYSIDINSIPEEKFTQEPILG-----------------HVSMLTDVHL-IKDSDGHQFIITSDRDEHIKISHYPQ 229 (450)
T ss_dssp ETTSEEEEEETTSCCCSSCCCCCSEE-----------------CSSCEEEEEE-EECTTSCEEEEEEETTSCEEEEEESC
T ss_pred eCCCcEEEEecCCcccccccceeeec-----------------ccCceEEEEE-cCCCCCCcEEEEEcCCCcEEEEECCC
Confidence 4578888887 22221 1111 1123466774 555 76666666678999999876
Q ss_pred CceE
Q 014345 169 DDCA 172 (426)
Q Consensus 169 ~~~~ 172 (426)
..+.
T Consensus 230 ~~~~ 233 (450)
T 2vdu_B 230 CFIV 233 (450)
T ss_dssp TTCE
T ss_pred Ccee
Confidence 5544
No 217
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=89.42 E-value=9 Score=35.81 Aligned_cols=116 Identities=12% Similarity=-0.008 Sum_probs=68.3
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCccccc-EEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRP-KLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 100 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v-~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~ 100 (426)
....++++++|.++++-..++.|..++..... .+ ..+.+ ++ -.....|++.++|.+.++-..
T Consensus 172 ~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~--~~~~~~~~------~h---------~~~v~~l~fs~~g~~l~s~~~ 234 (343)
T 3lrv_A 172 EYSSGVLHKDSLLLALYSPDGILDVYNLSSPD--QASSRFPV------DE---------EAKIKEVKFADNGYWMVVECD 234 (343)
T ss_dssp CCCEEEECTTSCEEEEECTTSCEEEEESSCTT--SCCEECCC------CT---------TSCEEEEEECTTSSEEEEEES
T ss_pred ceEEEEECCCCCEEEEEcCCCEEEEEECCCCC--CCccEEec------cC---------CCCEEEEEEeCCCCEEEEEeC
Confidence 36788999999988887788889999886421 11 22221 01 112568999999986666554
Q ss_pred CCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECC-CCeEEEEEcCC
Q 014345 101 NMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRG-NRAIREIQLHF 168 (426)
Q Consensus 101 N~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsg-N~rIr~I~l~~ 168 (426)
+.|+.+| .+. +.++..-. . ....... ..++ ++++|.++++-.+ ++.|+.++...
T Consensus 235 -~~v~iwd~~~~~~~~~~~~~~--------~---~~~~~~~-~~~~-~~~~g~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 235 -QTVVCFDLRKDVGTLAYPTYT--------I---PEFKTGT-VTYD-IDDSGKNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp -SBEEEEETTSSTTCBSSCCCB--------C--------CC-EEEE-ECTTSSEEEEEETTTTEEEEEEECT
T ss_pred -CeEEEEEcCCCCcceeecccc--------c---ccccccc-eEEE-ECCCCCEEEEecCCCCcEEEEEEcc
Confidence 3899988 222 22221100 0 0001111 3477 5778877666444 77888887754
No 218
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=89.30 E-value=5.8 Score=36.35 Aligned_cols=72 Identities=15% Similarity=0.146 Sum_probs=50.2
Q ss_pred CceEEEEcC-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECC
Q 014345 22 EPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 100 (426)
Q Consensus 22 ~P~GIaVd~-dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~ 100 (426)
...+|++.+ +++++++-...+.|..++... +......... .++ -.....|+++++|+.+++-..
T Consensus 117 ~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~---~~~---------~~~v~~~~~~~~~~~l~~~~~ 181 (366)
T 3k26_A 117 AINELKFHPRDPNLLLSVSKDHALRLWNIQT---DTLVAIFGGV---EGH---------RDEVLSADYDLLGEKIMSCGM 181 (366)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTT---TEEEEEECST---TSC---------SSCEEEEEECTTSSEEEEEET
T ss_pred cEEEEEECCCCCCEEEEEeCCCeEEEEEeec---CeEEEEeccc---ccc---------cCceeEEEECCCCCEEEEecC
Confidence 578899998 888877777788999998864 2322222110 111 123578999999987777777
Q ss_pred CCEEEEEc
Q 014345 101 NMAIRKIS 108 (426)
Q Consensus 101 N~rIrk~d 108 (426)
++.|+.++
T Consensus 182 dg~i~i~d 189 (366)
T 3k26_A 182 DHSLKLWR 189 (366)
T ss_dssp TSCEEEEE
T ss_pred CCCEEEEE
Confidence 88899998
No 219
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=89.00 E-value=7.3 Score=37.04 Aligned_cols=125 Identities=10% Similarity=0.029 Sum_probs=73.9
Q ss_pred CceEEEEcCCCcEEEEECCCCe-EEEEeCCCCcccccEEEe-cCCCCcccccCCcccccccCCcceEEEcCCCCEEEEEC
Q 014345 22 EPYSVEVLPGGELLILDSANSN-LYRISSSLSLYSRPKLVA-GSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~r-I~kid~dg~~~g~v~~va-G~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt 99 (426)
...+|+++++|.++++-...+. |..++..... .+..+. |. + -..-..|+++++|.++++-.
T Consensus 197 ~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~--~~~~~~~g~------h---------~~~v~~~~~s~~~~~l~s~s 259 (355)
T 3vu4_A 197 PIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV--LVREFRRGL------D---------RADVVDMKWSTDGSKLAVVS 259 (355)
T ss_dssp CEEEEEECTTSSEEEEEETTCSEEEEEETTTCC--EEEEEECTT------C---------CSCEEEEEECTTSCEEEEEE
T ss_pred ceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc--EEEEEEcCC------C---------CCcEEEEEECCCCCEEEEEE
Confidence 4689999999998888888887 9999887421 223332 21 0 11246899999999888877
Q ss_pred CCCEEEEEc--CCC---cEEEeCCccCCCCCCCCCCc--ccccCC----CC-CeeEEECCCCeEEEEECCCCeEEEEEcC
Q 014345 100 MNMAIRKIS--DSG---VTTIAGGKWGRGGGHVDGPS--EDAKFS----ND-FDVVYIGSSCSLLVIDRGNRAIREIQLH 167 (426)
Q Consensus 100 ~N~rIrk~d--~g~---VstIaGg~~g~~~G~~dG~~--~~a~f~----~P-~gIa~vd~~G~LYVaDsgN~rIr~I~l~ 167 (426)
.++.|+.++ .+. ...+.+-... ....... ....+. .+ ..++ ..+++..+++-..++++++++..
T Consensus 260 ~d~~v~iw~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a-~~~d~~~l~~~~~dg~~~~~~~~ 335 (355)
T 3vu4_A 260 DKWTLHVFEIFNDQDNKRHALKGWINM---KYFQSEWSLCNFKLSVDKHVRGCKIA-WISESSLVVVWPHTRMIETFKVV 335 (355)
T ss_dssp TTCEEEEEESSCCSCCCSEETTTTEEC---CCCCCSSCSEEEECCCCTTCCCCEEE-ESSSSEEEEEETTTTEEEEEEEE
T ss_pred CCCEEEEEEccCCCCcccccccceeec---cccccccceeEEEeccCCCCCceEEE-EeCCCCEEEEEeCCCeEEEEEEE
Confidence 788999988 221 1111110000 0000000 000010 11 3344 68888887777778888888754
No 220
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=88.71 E-value=7.7 Score=38.64 Aligned_cols=111 Identities=7% Similarity=0.146 Sum_probs=71.6
Q ss_pred CCceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC----------
Q 014345 21 IEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD---------- 90 (426)
Q Consensus 21 ~~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~---------- 90 (426)
.....++++++|.++++-...+.|..++.... . .+.-- .+. .-.....|++.+
T Consensus 489 ~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~---~--~~~~~----~~~--------h~~~v~~~~~sp~~~~~~~~~~ 551 (615)
T 1pgu_A 489 AKPSYISISPSETYIAAGDVMGKILLYDLQSR---E--VKTSR----WAF--------RTSKINAISWKPAEKGANEEEI 551 (615)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTT---E--EEECC----SCC--------CSSCEEEEEECCCC------CC
T ss_pred CceEEEEECCCCCEEEEcCCCCeEEEeeCCCC---c--ceeEe----ecC--------CCCceeEEEEcCcccccccccc
Confidence 35789999999998887778889999988632 2 12111 110 012357899998
Q ss_pred CCCEEEEECCCCEEEEEc--CC-C-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEc
Q 014345 91 RGNIYIADTMNMAIRKIS--DS-G-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQL 166 (426)
Q Consensus 91 dG~LYVADt~N~rIrk~d--~g-~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l 166 (426)
+|.++++-..++.|+.++ .+ . +.++.+- -....+|++ .+++. +++-...+.|+.+++
T Consensus 552 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h-----------------~~~v~~l~~-s~~~~-l~s~~~d~~v~iw~~ 612 (615)
T 1pgu_A 552 EEDLVATGSLDTNIFIYSVKRPMKIIKALNAH-----------------KDGVNNLLW-ETPST-LVSSGADACIKRWNV 612 (615)
T ss_dssp SCCEEEEEETTSCEEEEESSCTTCCEEETTSS-----------------TTCEEEEEE-EETTE-EEEEETTSCEEEEEE
T ss_pred CCCEEEEEcCCCcEEEEECCCCceechhhhcC-----------------ccceEEEEE-cCCCC-eEEecCCceEEEEee
Confidence 898888777788899888 33 2 2222211 113466774 56677 666666788888876
Q ss_pred C
Q 014345 167 H 167 (426)
Q Consensus 167 ~ 167 (426)
.
T Consensus 613 ~ 613 (615)
T 1pgu_A 613 V 613 (615)
T ss_dssp C
T ss_pred e
Confidence 5
No 221
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=88.55 E-value=7.7 Score=37.03 Aligned_cols=128 Identities=9% Similarity=0.024 Sum_probs=74.5
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEe-cCCCCcccccCCcccccccCCcceEEEcCCC-CEEEEEC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVA-GSAEGYSGHVDGKPREARMNHPKGLTVDDRG-NIYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~va-G~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG-~LYVADt 99 (426)
...++++.++|+++++- ..+.|..++.... +....+. -......++ -.....++++++| +++++-.
T Consensus 179 ~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~--~~~~~~~~~~~~~~~~~---------~~~v~~~~~~p~~~~~l~s~~ 246 (447)
T 3dw8_B 179 HINSISINSDYETYLSA-DDLRINLWHLEIT--DRSFNIVDIKPANMEEL---------TEVITAAEFHPNSCNTFVYSS 246 (447)
T ss_dssp CCCEEEECTTSSEEEEE-CSSEEEEEETTEE--EEEEEEEECCCSSGGGC---------CCCEEEEEECSSCTTEEEEEE
T ss_pred ceEEEEEcCCCCEEEEe-CCCeEEEEECCCC--Cceeeeeeccccccccc---------CcceEEEEECCCCCcEEEEEe
Confidence 46799999999988876 6889999988721 1111111 111011111 1235789999998 8888777
Q ss_pred CCCEEEEEc--CCCc-----EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 014345 100 MNMAIRKIS--DSGV-----TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 168 (426)
Q Consensus 100 ~N~rIrk~d--~g~V-----stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~ 168 (426)
.++.|+.++ .+.. .++.+..... ..............|+ +.+++.++++-.. +.|+.+++..
T Consensus 247 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~v~~~~-~s~~g~~l~~~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 247 SKGTIRLCDMRASALCDRHSKLFEEPEDPS-----NRSFFSEIISSISDVK-FSHSGRYMMTRDY-LSVKVWDLNM 315 (447)
T ss_dssp TTSCEEEEETTTCSSSCTTCEEECCC----------CCHHHHHTTCEEEEE-ECTTSSEEEEEES-SEEEEEETTC
T ss_pred CCCeEEEEECcCCccccceeeEeccCCCcc-----ccccccccCceEEEEE-ECCCCCEEEEeeC-CeEEEEeCCC
Confidence 788899998 3332 3333211000 0000000111345677 5677877666666 8999999864
No 222
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=88.54 E-value=11 Score=41.79 Aligned_cols=113 Identities=8% Similarity=0.026 Sum_probs=71.7
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC--CCCEEEEEC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD--RGNIYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~--dG~LYVADt 99 (426)
...+++++++|.++++-..++.|..++..... .+..+.+.. ..-..+++.+ ++.++++-.
T Consensus 659 ~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~--~~~~~~~~~----------------~~v~~~~~~~~~~~~~l~sg~ 720 (1249)
T 3sfz_A 659 EVLCCAFSSDDSYIATCSADKKVKIWDSATGK--LVHTYDEHS----------------EQVNCCHFTNKSNHLLLATGS 720 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCC--EEEEEECCS----------------SCEEEEEECSSSSCCEEEEEE
T ss_pred CEEEEEEecCCCEEEEEeCCCeEEEEECCCCc--eEEEEcCCC----------------CcEEEEEEecCCCceEEEEEe
Confidence 56789999999888877778899999887421 122332221 1235677777 445777766
Q ss_pred CCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCc
Q 014345 100 MNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDD 170 (426)
Q Consensus 100 ~N~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~ 170 (426)
.++.|+.++ .+. +.++.+.. .....++ +.+++.++++-...+.|+.+++....
T Consensus 721 ~d~~v~vwd~~~~~~~~~~~~h~-----------------~~v~~~~-~sp~~~~l~s~s~dg~v~vwd~~~~~ 776 (1249)
T 3sfz_A 721 NDFFLKLWDLNQKECRNTMFGHT-----------------NSVNHCR-FSPDDELLASCSADGTLRLWDVRSAN 776 (1249)
T ss_dssp TTSCEEEEETTSSSEEEEECCCS-----------------SCEEEEE-ECSSTTEEEEEESSSEEEEEEGGGTE
T ss_pred CCCeEEEEECCCcchhheecCCC-----------------CCEEEEE-EecCCCEEEEEECCCeEEEEeCCCCc
Confidence 778888888 333 33443310 1235566 46677777766667888888876543
No 223
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=88.52 E-value=8.2 Score=36.17 Aligned_cols=112 Identities=14% Similarity=0.176 Sum_probs=71.4
Q ss_pred ceEEEE-----cC-CCcEEEEECCCCeEEEEeCCCCc----cccc-EEEecCCCCcccccCCcccccccCCcceEEEcCC
Q 014345 23 PYSVEV-----LP-GGELLILDSANSNLYRISSSLSL----YSRP-KLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR 91 (426)
Q Consensus 23 P~GIaV-----d~-dG~LYVaD~~n~rI~kid~dg~~----~g~v-~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~d 91 (426)
-.+|++ .+ +|.++++-...+.|+.++..... .+.. ..+.| + -..-..|++.++
T Consensus 24 V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~-------h---------~~~V~~~~~~~~ 87 (343)
T 2xzm_R 24 VTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTG-------H---------NHFVSDLALSQE 87 (343)
T ss_dssp EEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECC-------C---------SSCEEEEEECSS
T ss_pred hhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhcc-------C---------CCceEEEEECCC
Confidence 577888 65 88888888788888888765211 0111 11111 1 112467899999
Q ss_pred CCEEEEECCCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 014345 92 GNIYIADTMNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 168 (426)
Q Consensus 92 G~LYVADt~N~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~ 168 (426)
+.+.++-..++.|+.++ .+. +.++.+-. ..-..|+ +.+++.++++-...+.|+.+++.+
T Consensus 88 ~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~-----------------~~v~~v~-~sp~~~~l~s~~~d~~i~~wd~~~ 149 (343)
T 2xzm_R 88 NCFAISSSWDKTLRLWDLRTGTTYKRFVGHQ-----------------SEVYSVA-FSPDNRQILSAGAEREIKLWNILG 149 (343)
T ss_dssp TTEEEEEETTSEEEEEETTSSCEEEEEECCC-----------------SCEEEEE-ECSSTTEEEEEETTSCEEEEESSS
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEEEcCCC-----------------CcEEEEE-ECCCCCEEEEEcCCCEEEEEeccC
Confidence 99888888889999998 344 34444311 1234666 466776666666678888888764
No 224
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=88.41 E-value=15 Score=33.53 Aligned_cols=68 Identities=9% Similarity=-0.019 Sum_probs=48.7
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEE--cCCCCEEEEEC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTV--DDRGNIYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaV--d~dG~LYVADt 99 (426)
...++++.++|+++++-..++.|..++.+. +......+. -.....|++ ++++.++++-.
T Consensus 88 ~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~---~~~~~~~~~----------------~~~v~~~~~~~~~~~~~l~~~~ 148 (368)
T 3mmy_A 88 PVLDVCWSDDGSKVFTASCDKTAKMWDLSS---NQAIQIAQH----------------DAPVKTIHWIKAPNYSCVMTGS 148 (368)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTT---TEEEEEEEC----------------SSCEEEEEEEECSSCEEEEEEE
T ss_pred CEEEEEECcCCCEEEEEcCCCcEEEEEcCC---CCceeeccc----------------cCceEEEEEEeCCCCCEEEEcc
Confidence 467899999998777777788999998874 233333222 112467888 78888777776
Q ss_pred CCCEEEEEc
Q 014345 100 MNMAIRKIS 108 (426)
Q Consensus 100 ~N~rIrk~d 108 (426)
.++.|+.++
T Consensus 149 ~dg~i~vwd 157 (368)
T 3mmy_A 149 WDKTLKFWD 157 (368)
T ss_dssp TTSEEEEEC
T ss_pred CCCcEEEEE
Confidence 788999998
No 225
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=88.39 E-value=22 Score=36.64 Aligned_cols=118 Identities=7% Similarity=0.005 Sum_probs=63.8
Q ss_pred CceEEEEcCCCc-EEEEECCC----CeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC--CCCE
Q 014345 22 EPYSVEVLPGGE-LLILDSAN----SNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD--RGNI 94 (426)
Q Consensus 22 ~P~GIaVd~dG~-LYVaD~~n----~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~--dG~L 94 (426)
.+..+++++||. |+++.... ..|+.++..++. ....+.... ..+ -.+....+++.+ +|.+
T Consensus 259 ~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~--~~~~~~~~~--~~~---------~~~~~~~~~~sp~~dg~~ 325 (706)
T 2z3z_A 259 FLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR--FVRTLFVET--DKH---------YVEPLHPLTFLPGSNNQF 325 (706)
T ss_dssp EEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC--EEEEEEEEE--CSS---------CCCCCSCCEECTTCSSEE
T ss_pred eEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc--eeeEEEEcc--CCC---------eECccCCceeecCCCCEE
Confidence 467899999998 66543222 378889887521 333333210 000 011235678888 8875
Q ss_pred EEEE-C-CCCEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCe-eEEECCCC-eEEEEECCCC----eEEEE
Q 014345 95 YIAD-T-MNMAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFD-VVYIGSSC-SLLVIDRGNR----AIREI 164 (426)
Q Consensus 95 YVAD-t-~N~rIrk~d-~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~g-Ia~vd~~G-~LYVaDsgN~----rIr~I 164 (426)
+++- . +..+|+.++ +++ +..+.++.. .... ++ ++++| .||++...++ .|+.+
T Consensus 326 l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~-----------------~v~~~~~-~spdg~~l~~~~~~~~~~~~~l~~~ 387 (706)
T 2z3z_A 326 IWQSRRDGWNHLYLYDTTGRLIRQVTKGEW-----------------EVTNFAG-FDPKGTRLYFESTEASPLERHFYCI 387 (706)
T ss_dssp EEEECTTSSCEEEEEETTSCEEEECCCSSS-----------------CEEEEEE-ECTTSSEEEEEESSSCTTCBEEEEE
T ss_pred EEEEccCCccEEEEEECCCCEEEecCCCCe-----------------EEEeeeE-EcCCCCEEEEEecCCCCceEEEEEE
Confidence 5443 2 235777777 555 344433210 0112 34 45555 5777666544 78888
Q ss_pred EcCCCc
Q 014345 165 QLHFDD 170 (426)
Q Consensus 165 ~l~~~~ 170 (426)
++.+..
T Consensus 388 d~~~~~ 393 (706)
T 2z3z_A 388 DIKGGK 393 (706)
T ss_dssp ETTCCC
T ss_pred EcCCCC
Confidence 776543
No 226
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=88.20 E-value=9.7 Score=39.71 Aligned_cols=118 Identities=12% Similarity=0.070 Sum_probs=72.8
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
.-.+|+++++|.++++-...+.|+.++..... .+..+.|.. ..-..|+++++|+.+++-..+
T Consensus 432 ~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~--~~~~~~~h~----------------~~v~~~~~s~~~~~l~s~s~D 493 (694)
T 3dm0_A 432 FVEDVVLSSDGQFALSGSWDGELRLWDLAAGV--STRRFVGHT----------------KDVLSVAFSLDNRQIVSASRD 493 (694)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTE--EEEEEECCS----------------SCEEEEEECTTSSCEEEEETT
T ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEECCCCc--ceeEEeCCC----------------CCEEEEEEeCCCCEEEEEeCC
Confidence 35688999999988888788899999886421 123333221 124678999999877777778
Q ss_pred CEEEEEc-CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC--eEEEEECCCCeEEEEEcCCCce
Q 014345 102 MAIRKIS-DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC--SLLVIDRGNRAIREIQLHFDDC 171 (426)
Q Consensus 102 ~rIrk~d-~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G--~LYVaDsgN~rIr~I~l~~~~~ 171 (426)
+.|+.++ .+. ..++..... ++ -..-.++++ .+++ .++++-...+.|+.+++....+
T Consensus 494 ~~i~iwd~~~~~~~~~~~~~~----~h---------~~~v~~~~~-~~~~~~~~l~s~s~d~~v~vwd~~~~~~ 553 (694)
T 3dm0_A 494 RTIKLWNTLGECKYTISEGGE----GH---------RDWVSCVRF-SPNTLQPTIVSASWDKTVKVWNLSNCKL 553 (694)
T ss_dssp SCEEEECTTSCEEEEECSSTT----SC---------SSCEEEEEE-CSCSSSCEEEEEETTSCEEEEETTTCCE
T ss_pred CEEEEEECCCCcceeeccCCC----CC---------CCcEEEEEE-eCCCCcceEEEEeCCCeEEEEECCCCcE
Confidence 8999999 333 233322110 11 112345553 4443 4566666677888888765544
No 227
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=87.85 E-value=10 Score=36.63 Aligned_cols=109 Identities=15% Similarity=0.119 Sum_probs=65.0
Q ss_pred EEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCCCEEEE
Q 014345 27 EVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNMAIRK 106 (426)
Q Consensus 27 aVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N~rIrk 106 (426)
+++++++++++-...+.|..++..... .+..+.+. -.....++++++|+.+++-..++.|+.
T Consensus 275 ~~~~~~~~l~~~~~d~~i~vwd~~~~~--~~~~~~~~----------------~~~v~~~~~~~~~~~l~sg~~dg~i~v 336 (464)
T 3v7d_B 275 TVSGHGNIVVSGSYDNTLIVWDVAQMK--CLYILSGH----------------TDRIYSTIYDHERKRCISASMDTTIRI 336 (464)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTTE--EEEEECCC----------------SSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCc--EEEEecCC----------------CCCEEEEEEcCCCCEEEEEeCCCcEEE
Confidence 445667777776678888888876321 12222221 112467999999998888777889999
Q ss_pred Ec--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEe
Q 014345 107 IS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAY 173 (426)
Q Consensus 107 ~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~~ 173 (426)
++ .+. +.++.+.. .....+++ + +..+++-...+.|+.+++.......
T Consensus 337 wd~~~~~~~~~~~~h~-----------------~~v~~~~~-~--~~~l~s~s~dg~v~vwd~~~~~~~~ 386 (464)
T 3v7d_B 337 WDLENGELMYTLQGHT-----------------ALVGLLRL-S--DKFLVSAAADGSIRGWDANDYSRKF 386 (464)
T ss_dssp EETTTTEEEEEECCCS-----------------SCEEEEEE-C--SSEEEEEETTSEEEEEETTTCCEEE
T ss_pred EECCCCcEEEEEeCCC-----------------CcEEEEEE-c--CCEEEEEeCCCcEEEEECCCCceee
Confidence 99 333 33443210 01234442 2 4555555556788888877654443
No 228
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=87.23 E-value=14 Score=32.17 Aligned_cols=69 Identities=22% Similarity=0.254 Sum_probs=43.7
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCC-CcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEEC-
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSL-SLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADT- 99 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg-~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt- 99 (426)
...+++++++|..+++.. .+.|+.++.++ . ....+... . .-.....++++++|..+++-.
T Consensus 43 ~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~---~~~~~~~~------~--------~~~~~~~~~~spdg~~l~~~~~ 104 (297)
T 2ojh_A 43 LFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDP---SPEKVDTG------F--------ATICNNDHGISPDGALYAISDK 104 (297)
T ss_dssp CCEEEEECTTSSEEEEEE-TTEEEEEESSSCC---SCEECCCT------T--------CCCBCSCCEECTTSSEEEEEEC
T ss_pred ceEeeEECCCCCEEEEEc-CCeEEEEeCCCCC---CceEeccc------c--------ccccccceEECCCCCEEEEEEe
Confidence 578999999999666553 67999998874 2 22222211 0 012356789999987444433
Q ss_pred ---CCCEEEEEc
Q 014345 100 ---MNMAIRKIS 108 (426)
Q Consensus 100 ---~N~rIrk~d 108 (426)
...+|+.++
T Consensus 105 ~~~~~~~l~~~~ 116 (297)
T 2ojh_A 105 VEFGKSAIYLLP 116 (297)
T ss_dssp TTTSSCEEEEEE
T ss_pred CCCCcceEEEEE
Confidence 357888887
No 229
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=86.89 E-value=4.6 Score=36.96 Aligned_cols=114 Identities=11% Similarity=0.014 Sum_probs=69.0
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcc-cccEEEecCCCCcccccCCcccccccCCcceEEEcCCCC-EEEEEC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLY-SRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~-g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LYVADt 99 (426)
...+++++++|.++++-...+.|..++.+.... ..+....+. -.....+++.++|+ ++++-.
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~~l~~~~ 76 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRY----------------KHPLLCCNFIDNTDLQIYVGT 76 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEEC----------------SSCEEEEEEEESSSEEEEEEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeec----------------CCceEEEEECCCCCcEEEEEc
Confidence 467899999998777766788888887763210 012222221 11256799999998 666655
Q ss_pred CCCEEEEEcC-CC--cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 014345 100 MNMAIRKISD-SG--VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 168 (426)
Q Consensus 100 ~N~rIrk~d~-g~--VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~ 168 (426)
.++.|+.++- .. ..++.+.. + -.....|++. + +.++++-..++.|+.+++..
T Consensus 77 ~dg~i~~wd~~~~~~~~~~~~~~------~---------~~~v~~l~~~-~-~~~l~s~~~d~~i~iwd~~~ 131 (342)
T 1yfq_A 77 VQGEILKVDLIGSPSFQALTNNE------A---------NLGICRICKY-G-DDKLIAASWDGLIEVIDPRN 131 (342)
T ss_dssp TTSCEEEECSSSSSSEEECBSCC------C---------CSCEEEEEEE-T-TTEEEEEETTSEEEEECHHH
T ss_pred CCCeEEEEEeccCCceEeccccC------C---------CCceEEEEeC-C-CCEEEEEcCCCeEEEEcccc
Confidence 6788888874 33 33332200 0 0123566754 4 55666666678899888754
No 230
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=86.67 E-value=9.8 Score=40.41 Aligned_cols=116 Identities=14% Similarity=0.129 Sum_probs=71.9
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
....|+.|.+|+|||+...++-|.++++.. +++..+... +..+ -+.+..|+.|.+|+|||+-.
T Consensus 473 ~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~---~~~~~~~~~--~~~~----------~~~~~~i~~d~~g~lWigt~-- 535 (758)
T 3ott_A 473 FINQIIPDNEGNVWVLLYNNKGIDKINPRT---REVTKLFAD--ELTG----------EKSPNYLLCDEDGLLWVGFH-- 535 (758)
T ss_dssp CEEEEEECTTSCEEEEETTCSSEEEEETTT---TEEEEECTT--TSCG----------GGCEEEEEECTTSCEEEEET--
T ss_pred eeeeEEEcCCCCEEEEccCCCCcEEEeCCC---CceEEecCC--CcCC----------CcccceEEECCCCCEEEEec--
Confidence 367899999999999443346799999874 334433211 1000 13467899999999999963
Q ss_pred CEEEEEcC--CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceE
Q 014345 102 MAIRKISD--SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCA 172 (426)
Q Consensus 102 ~rIrk~d~--g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~ 172 (426)
+-|.+++. +.+..+.- +|... ....+|+ . ++|+|||+- ++-|.++++......
T Consensus 536 ~Gl~~~~~~~~~~~~~~~----------~gl~~----~~i~~i~-~-~~g~lWi~t--~~Gl~~~~~~~~~~~ 590 (758)
T 3ott_A 536 GGVMRINPKDESQQSISF----------GSFSN----NEILSMT-C-VKNSIWVST--TNGLWIIDRKTMDAR 590 (758)
T ss_dssp TEEEEECC--CCCCBCCC----------CC-------CCEEEEE-E-ETTEEEEEE--SSCEEEEETTTCCEE
T ss_pred CceEEEecCCCceEEecc----------cCCCc----cceEEEE-E-CCCCEEEEC--CCCeEEEcCCCceeE
Confidence 46888882 33332210 11111 2345565 3 489999987 456889998865544
No 231
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=86.39 E-value=6.5 Score=35.96 Aligned_cols=109 Identities=10% Similarity=0.025 Sum_probs=65.4
Q ss_pred EcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC---CCCEEEEECCCCEE
Q 014345 28 VLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD---RGNIYIADTMNMAI 104 (426)
Q Consensus 28 Vd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~---dG~LYVADt~N~rI 104 (426)
++++++++++-..++.|..++.... ......+. -.....+++++ +++++++-..++.|
T Consensus 176 ~~~~~~~l~~~~~d~~i~i~d~~~~---~~~~~~~~----------------~~~v~~~~~~~~~~~~~~l~~~~~dg~i 236 (357)
T 3i2n_A 176 YNQEERVVCAGYDNGDIKLFDLRNM---ALRWETNI----------------KNGVCSLEFDRKDISMNKLVATSLEGKF 236 (357)
T ss_dssp CC-CCCEEEEEETTSEEEEEETTTT---EEEEEEEC----------------SSCEEEEEESCSSSSCCEEEEEESTTEE
T ss_pred cCCCCCEEEEEccCCeEEEEECccC---ceeeecCC----------------CCceEEEEcCCCCCCCCEEEEECCCCeE
Confidence 5678888887778889999998742 22222211 11256789998 78877776778889
Q ss_pred EEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCe-EEEEECCCCeEEEEEcCC
Q 014345 105 RKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCS-LLVIDRGNRAIREIQLHF 168 (426)
Q Consensus 105 rk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~-LYVaDsgN~rIr~I~l~~ 168 (426)
+.++ .+. +..+.-.... + .-.....+++ .+++. ++++-..++.|+.+++..
T Consensus 237 ~i~d~~~~~~~~~~~~~~~~---~---------~~~~v~~~~~-~~~~~~~l~~~~~dg~i~iwd~~~ 291 (357)
T 3i2n_A 237 HVFDMRTQHPTKGFASVSEK---A---------HKSTVWQVRH-LPQNRELFLTAGGAGGLHLWKYEY 291 (357)
T ss_dssp EEEEEEEEETTTEEEEEEEE---C---------CSSCEEEEEE-ETTEEEEEEEEETTSEEEEEEEEC
T ss_pred EEEeCcCCCcccceeeeccC---C---------CcCCEEEEEE-CCCCCcEEEEEeCCCcEEEeecCC
Confidence 9888 222 2222100000 0 0112456664 55665 677777778888888764
No 232
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=86.31 E-value=20 Score=36.66 Aligned_cols=84 Identities=15% Similarity=0.179 Sum_probs=48.4
Q ss_pred CceEEEEcCCCcEEEEECCCC--eEEEEeCCCCcccccEEEecCCCCcccccCCcccccccC-CcceEEEcCCCCEEEEE
Q 014345 22 EPYSVEVLPGGELLILDSANS--NLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMN-HPKGLTVDDRGNIYIAD 98 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~--rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln-~P~GIaVd~dG~LYVAD 98 (426)
....+++++||.||++...++ +|++++.++ +....+.... ...+ . ..+. ....+++.++|.++++-
T Consensus 243 ~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~---~~~~~l~~~~-~~~~---~----p~w~~~~~~~~~~~~~~~~~~~ 311 (662)
T 3azo_A 243 AIAQAEWAPDGSLIVATDRTGWWNLHRVDPAT---GAATQLCRRE-EEFA---G----PLWTPGMRWFAPLANGLIAVVH 311 (662)
T ss_dssp CEEEEEECTTSCEEEEECTTSSCEEEEECTTT---CCEEESSCCS-SBSS---C----CCCSTTCCSEEECTTSCEEEEE
T ss_pred eEcceEECCCCeEEEEECCCCCeEEEEEECCC---Cceeeccccc-cccc---C----ccccccCceEeEeCCCEEEEEE
Confidence 567889999999877665555 899998754 3334333211 0000 0 0011 13468888888877664
Q ss_pred C-CCCEEEEEc-CCC-cEEEe
Q 014345 99 T-MNMAIRKIS-DSG-VTTIA 116 (426)
Q Consensus 99 t-~N~rIrk~d-~g~-VstIa 116 (426)
. +..+|+.++ +++ +.++.
T Consensus 312 ~~~~~~l~~~d~~~~~~~~l~ 332 (662)
T 3azo_A 312 GKGAAVLGILDPESGELVDAA 332 (662)
T ss_dssp BSSSCEEEEEETTTTEEEECC
T ss_pred EcCccEEEEEECCCCcEEEec
Confidence 4 445677777 433 54443
No 233
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=86.30 E-value=1.9 Score=40.59 Aligned_cols=132 Identities=10% Similarity=-0.059 Sum_probs=68.3
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcc-cccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLY-SRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 100 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~-g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~ 100 (426)
...++++.++|+++++-...+.|..++.+.... .....+.+. + -.....|++.++|+++++-..
T Consensus 102 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~------h---------~~~v~~~~~~~~~~~l~~~~~ 166 (377)
T 3dwl_C 102 AATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRP------L---------RSTILSLDWHPNNVLLAAGCA 166 (377)
T ss_dssp CEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSS------C---------CSCEEEEEECTTSSEEEEEES
T ss_pred ceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecc------c---------CCCeEEEEEcCCCCEEEEEeC
Confidence 456777778777666555667777777653210 012222220 0 123568999999987777766
Q ss_pred CCEEEEEc-C-CCcEEEe-CCccCCCCCCCCCCcc--cccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 014345 101 NMAIRKIS-D-SGVTTIA-GGKWGRGGGHVDGPSE--DAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 171 (426)
Q Consensus 101 N~rIrk~d-~-g~VstIa-Gg~~g~~~G~~dG~~~--~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~ 171 (426)
++.|+.++ . ..+.... ....+.. ...+... -..-.....++ +.+++.++++-..++.|+.+++....+
T Consensus 167 d~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~-~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 167 DRKAYVLSAYVRDVDAKPEASVWGSR--LPFNTVCAEYPSGGWVHAVG-FSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp SSCEEEEEECCSSCC-CCCSCSSCSC--CCEEEEEECCCCSSSEEEEE-ECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred CCEEEEEEEEecccCCCccccccccc--cchhhhhhcccCCceEEEEE-ECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 77888887 2 2211100 0000000 0000000 00112345677 577787777666788999999876554
No 234
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=86.07 E-value=14 Score=34.56 Aligned_cols=112 Identities=11% Similarity=0.101 Sum_probs=66.6
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCC-CCcccc-cEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEEC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSS-LSLYSR-PKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~d-g~~~g~-v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt 99 (426)
.-.+|+++++|+++++-...+.|+.++.. ...... +..+.+. -..-..|++.+++.++++-.
T Consensus 109 ~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h----------------~~~v~~v~~~p~~~~l~s~s 172 (330)
T 2hes_X 109 EVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEH----------------SQDVKHVIWHPSEALLASSS 172 (330)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCC----------------SSCEEEEEECSSSSEEEEEE
T ss_pred cEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccC----------------CCceEEEEECCCCCEEEEEc
Confidence 35688899999888877778888888873 211011 1122111 11246789999999888877
Q ss_pred CCCEEEEEc--CCC---cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCC--CeEEEEECCCCeEEEEEcC
Q 014345 100 MNMAIRKIS--DSG---VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSS--CSLLVIDRGNRAIREIQLH 167 (426)
Q Consensus 100 ~N~rIrk~d--~g~---VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~--G~LYVaDsgN~rIr~I~l~ 167 (426)
.++.|+.++ .+. +.++.+-. ..-+.+++ .++ +.++++-...+.|+.+++.
T Consensus 173 ~D~~i~iW~~~~~~~~~~~~~~~h~-----------------~~v~~~~~-~~~~~~~~l~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 173 YDDTVRIWKDYDDDWECVAVLNGHE-----------------GTVWSSDF-DKTEGVFRLCSGSDDSTVRVWKYM 229 (330)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCS-----------------SCEEEEEE-CCSSSSCEEEEEETTSCEEEEEEE
T ss_pred CCCeEEEEECCCCCeeEEEEccCCC-----------------CcEEEEEe-cCCCCeeEEEEEeCCCeEEEEEec
Confidence 788888887 332 23332210 11244553 444 4555555566777777654
No 235
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=85.96 E-value=13 Score=38.12 Aligned_cols=79 Identities=10% Similarity=0.166 Sum_probs=46.4
Q ss_pred ceEEEEcCCCc-EEEEECC-------CCeEEEEeCCC-CcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCC
Q 014345 23 PYSVEVLPGGE-LLILDSA-------NSNLYRISSSL-SLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN 93 (426)
Q Consensus 23 P~GIaVd~dG~-LYVaD~~-------n~rI~kid~dg-~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~ 93 (426)
..++++++||. |+++... ...|+.++.++ +..+....+.... -.....+++.+||+
T Consensus 190 ~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~---------------~~~~~~~~~spdg~ 254 (662)
T 3azo_A 190 VTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP---------------EEAIAQAEWAPDGS 254 (662)
T ss_dssp ECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET---------------TBCEEEEEECTTSC
T ss_pred ccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC---------------CceEcceEECCCCe
Confidence 45678999997 5444422 24788888762 2111334443210 01246788999998
Q ss_pred EEEEECCCC--EEEEEc--CCCcEEEe
Q 014345 94 IYIADTMNM--AIRKIS--DSGVTTIA 116 (426)
Q Consensus 94 LYVADt~N~--rIrk~d--~g~VstIa 116 (426)
||++...++ +|..++ .+....+.
T Consensus 255 l~~~~~~~~~~~l~~~~~~~~~~~~l~ 281 (662)
T 3azo_A 255 LIVATDRTGWWNLHRVDPATGAATQLC 281 (662)
T ss_dssp EEEEECTTSSCEEEEECTTTCCEEESS
T ss_pred EEEEECCCCCeEEEEEECCCCceeecc
Confidence 777665444 888888 33344443
No 236
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=85.86 E-value=3.3 Score=39.84 Aligned_cols=69 Identities=17% Similarity=0.130 Sum_probs=51.5
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCccccc-EEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRP-KLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 100 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v-~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~ 100 (426)
.-.+|+++|||.++++-...+.|..++... ++. ..+. .|+ -..-++|++.+||+++++=..
T Consensus 271 ~V~~~~~Spdg~~lasgs~D~~V~iwd~~~---~~~~~~~~------~gH---------~~~V~~v~fSpdg~~laS~S~ 332 (365)
T 4h5i_A 271 GITSMDVDMKGELAVLASNDNSIALVKLKD---LSMSKIFK------QAH---------SFAITEVTISPDSTYVASVSA 332 (365)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEETTT---TEEEEEET------TSS---------SSCEEEEEECTTSCEEEEEET
T ss_pred CeEeEEECCCCCceEEEcCCCEEEEEECCC---CcEEEEec------Ccc---------cCCEEEEEECCCCCEEEEEeC
Confidence 357899999999888877888999999864 222 2221 111 112578999999999999888
Q ss_pred CCEEEEEc
Q 014345 101 NMAIRKIS 108 (426)
Q Consensus 101 N~rIrk~d 108 (426)
.+.||+++
T Consensus 333 D~tvrvw~ 340 (365)
T 4h5i_A 333 ANTIHIIK 340 (365)
T ss_dssp TSEEEEEE
T ss_pred CCeEEEEE
Confidence 89999988
No 237
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=85.10 E-value=22 Score=32.26 Aligned_cols=125 Identities=7% Similarity=0.007 Sum_probs=73.8
Q ss_pred CCceEEEEcCCCcEEEEECCCCeEEEEeCCC-CcccccEEEecCCCCcccccCCcccccccCCcceEEEcC-CCCEEEEE
Q 014345 21 IEPYSVEVLPGGELLILDSANSNLYRISSSL-SLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYIAD 98 (426)
Q Consensus 21 ~~P~GIaVd~dG~LYVaD~~n~rI~kid~dg-~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~-dG~LYVAD 98 (426)
..+.++++++++ |+++. ..+.|..++... .. ......... . -.....|++.+ +|+++++-
T Consensus 151 ~~v~~~~~~~~~-l~~~~-~d~~i~i~d~~~~~~-~~~~~~~~~---~------------~~~i~~i~~~~~~~~~l~~~ 212 (342)
T 1yfq_A 151 NKIFTMDTNSSR-LIVGM-NNSQVQWFRLPLCED-DNGTIEESG---L------------KYQIRDVALLPKEQEGYACS 212 (342)
T ss_dssp CCEEEEEECSSE-EEEEE-STTEEEEEESSCCTT-CCCEEEECS---C------------SSCEEEEEECSGGGCEEEEE
T ss_pred CceEEEEecCCc-EEEEe-CCCeEEEEECCcccc-ccceeeecC---C------------CCceeEEEECCCCCCEEEEE
Confidence 357889998877 55554 577898888764 21 111111111 0 11357899999 88888777
Q ss_pred CCCCEEEEEc--CC------C-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCC
Q 014345 99 TMNMAIRKIS--DS------G-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFD 169 (426)
Q Consensus 99 t~N~rIrk~d--~g------~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~ 169 (426)
..++.|+.++ .. . +.++.+..... .+ .........++ +.+++.++++-..++.|+.+++...
T Consensus 213 ~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~~~~i~~~~-~s~~~~~l~~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 213 SIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL-----KD---TNLAYPVNSIE-FSPRHKFLYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp ETTSEEEEEECCTTCCSTTCTTCEEEECCCCCT-----TC---CSSCCCEEEEE-ECTTTCCEEEEETTSCEEEEETTTT
T ss_pred ecCCcEEEEEEcCCCcccccccceeeecccccc-----cc---cccceeEEEEE-EcCCCCEEEEecCCceEEEEcCccH
Confidence 7788888866 33 3 34443321100 00 01112345666 4667776666667889999998765
Q ss_pred ceE
Q 014345 170 DCA 172 (426)
Q Consensus 170 ~~~ 172 (426)
.+.
T Consensus 284 ~~~ 286 (342)
T 1yfq_A 284 KKI 286 (342)
T ss_dssp EEE
T ss_pred hHh
Confidence 544
No 238
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=85.07 E-value=20 Score=31.84 Aligned_cols=110 Identities=12% Similarity=0.107 Sum_probs=59.1
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccc-cEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSR-PKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 100 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~-v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~ 100 (426)
....++++++|.++++-..++.|..++......+. +..+.+. -..-..|++ +++++++-..
T Consensus 61 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~----------------~~~i~~~~~--~~~~l~~~~~ 122 (313)
T 3odt_A 61 FLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGH----------------QGNVCSLSF--QDGVVISGSW 122 (313)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCC----------------SSCEEEEEE--ETTEEEEEET
T ss_pred cEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhc----------------ccCEEEEEe--cCCEEEEEeC
Confidence 46778888888877766677777777654221111 1111111 112345666 3556666566
Q ss_pred CCEEEEEcCCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEc
Q 014345 101 NMAIRKISDSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQL 166 (426)
Q Consensus 101 N~rIrk~d~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l 166 (426)
++.|+.++.+. +..+.+.. .....+++...++.++++-..++.|+.++.
T Consensus 123 d~~i~~~d~~~~~~~~~~~~-----------------~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~ 172 (313)
T 3odt_A 123 DKTAKVWKEGSLVYNLQAHN-----------------ASVWDAKVVSFSENKFLTASADKTIKLWQN 172 (313)
T ss_dssp TSEEEEEETTEEEEEEECCS-----------------SCEEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred CCCEEEEcCCcEEEecccCC-----------------CceeEEEEccCCCCEEEEEECCCCEEEEec
Confidence 78888888444 33333210 112344544435555555555677777763
No 239
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=85.05 E-value=16 Score=34.59 Aligned_cols=70 Identities=13% Similarity=0.124 Sum_probs=49.6
Q ss_pred cceEEEcCCCCEEEEECCCCE-EEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCC
Q 014345 83 PKGLTVDDRGNIYIADTMNMA-IRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGN 158 (426)
Q Consensus 83 P~GIaVd~dG~LYVADt~N~r-Irk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN 158 (426)
...|+++++|.++++-..++. |+.+| .+. +.++..+.. -..-..|+ +.+++.++++-...
T Consensus 198 v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h---------------~~~v~~~~-~s~~~~~l~s~s~d 261 (355)
T 3vu4_A 198 IKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLD---------------RADVVDMK-WSTDGSKLAVVSDK 261 (355)
T ss_dssp EEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTC---------------CSCEEEEE-ECTTSCEEEEEETT
T ss_pred eEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC---------------CCcEEEEE-ECCCCCEEEEEECC
Confidence 468999999998888777786 99998 344 445541100 01235677 57788888888788
Q ss_pred CeEEEEEcCC
Q 014345 159 RAIREIQLHF 168 (426)
Q Consensus 159 ~rIr~I~l~~ 168 (426)
+.|+.+++..
T Consensus 262 ~~v~iw~~~~ 271 (355)
T 3vu4_A 262 WTLHVFEIFN 271 (355)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEEccC
Confidence 9999999864
No 240
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=84.96 E-value=12 Score=34.87 Aligned_cols=113 Identities=17% Similarity=0.077 Sum_probs=68.3
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCc----ccc-cEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEE
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSL----YSR-PKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYI 96 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~----~g~-v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYV 96 (426)
.-.+|++.++|+++++-...+.|..++..... ... +..+.|. -..-..|+++++|++++
T Consensus 60 ~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h----------------~~~V~~v~~sp~g~~la 123 (330)
T 2hes_X 60 AIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGH----------------ENEVKGVAWSNDGYYLA 123 (330)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC--------------------CEEEEEECTTSCEEE
T ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCC----------------CCcEEEEEECCCCCEEE
Confidence 35789999999988887778888888764210 001 1111111 11246799999999888
Q ss_pred EECCCCEEEEEcC--C-C-c---EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 014345 97 ADTMNMAIRKISD--S-G-V---TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 168 (426)
Q Consensus 97 ADt~N~rIrk~d~--g-~-V---stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~ 168 (426)
+=..++.|+.++- . . . .++.+- -.....|+ ..+++.++++-...+.|+.++...
T Consensus 124 s~s~D~~v~iwd~~~~~~~~~~~~~~~~h-----------------~~~v~~v~-~~p~~~~l~s~s~D~~i~iW~~~~ 184 (330)
T 2hes_X 124 TCSRDKSVWIWETDESGEEYECISVLQEH-----------------SQDVKHVI-WHPSEALLASSSYDDTVRIWKDYD 184 (330)
T ss_dssp EEETTSCEEEEECCTTCCCCEEEEEECCC-----------------SSCEEEEE-ECSSSSEEEEEETTSCEEEEEEET
T ss_pred EEeCCCEEEEEeccCCCCCeEEEEEeccC-----------------CCceEEEE-ECCCCCEEEEEcCCCeEEEEECCC
Confidence 7777788888872 2 1 1 222221 01234566 466777777777778888887654
No 241
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=84.71 E-value=29 Score=33.39 Aligned_cols=114 Identities=11% Similarity=-0.031 Sum_probs=66.5
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
....++++++|+.+++-...+.|..++..... .+..+.+. -.....++++ +..+++-..+
T Consensus 312 ~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~--~~~~~~~h----------------~~~v~~~~~~--~~~l~s~s~d 371 (464)
T 3v7d_B 312 RIYSTIYDHERKRCISASMDTTIRIWDLENGE--LMYTLQGH----------------TALVGLLRLS--DKFLVSAAAD 371 (464)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEETTTTE--EEEEECCC----------------SSCEEEEEEC--SSEEEEEETT
T ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc--EEEEEeCC----------------CCcEEEEEEc--CCEEEEEeCC
Confidence 46788999998887777778889999876321 12222221 0113456665 5666666667
Q ss_pred CEEEEEc-CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEe
Q 014345 102 MAIRKIS-DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAY 173 (426)
Q Consensus 102 ~rIrk~d-~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~~ 173 (426)
+.|+.++ ........... . .....++ +.+++.++++-. .+.|+.++.....+..
T Consensus 372 g~v~vwd~~~~~~~~~~~~-~---------------~~~~~~~-~~~~~~~l~~~~-dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 372 GSIRGWDANDYSRKFSYHH-T---------------NLSAITT-FYVSDNILVSGS-ENQFNIYNLRSGKLVH 426 (464)
T ss_dssp SEEEEEETTTCCEEEEEEC-T---------------TCCCEEE-EEECSSEEEEEE-TTEEEEEETTTCCEEE
T ss_pred CcEEEEECCCCceeeeecC-C---------------CCccEEE-EEeCCCEEEEec-CCeEEEEECCCCcEEe
Confidence 8899988 33222221110 0 0112334 455666666655 6789888887665543
No 242
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=84.44 E-value=24 Score=32.24 Aligned_cols=118 Identities=12% Similarity=0.082 Sum_probs=70.0
Q ss_pred CceEEEEcCC--CcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC---------
Q 014345 22 EPYSVEVLPG--GELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD--------- 90 (426)
Q Consensus 22 ~P~GIaVd~d--G~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~--------- 90 (426)
...++++.++ |.++++-...+.|..++...........+.+. -.....+++.+
T Consensus 103 ~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~~~~~~ 166 (379)
T 3jrp_A 103 SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH----------------AIGVNSASWAPATIEEDGEH 166 (379)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECC----------------TTCEEEEEECCCC-------
T ss_pred ceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCC----------------CCceEEEEEcCccccccccc
Confidence 5778889887 88777777788888888764311111122111 11235677776
Q ss_pred ----CCCEEEEECCCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCC---CeEEEEECCCCe
Q 014345 91 ----RGNIYIADTMNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSS---CSLLVIDRGNRA 160 (426)
Q Consensus 91 ----dG~LYVADt~N~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~---G~LYVaDsgN~r 160 (426)
++.++++-..++.|+.++ .+. ...+.....+ .-.....++ +.++ +.++++-...+.
T Consensus 167 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-------------h~~~v~~~~-~sp~~~~~~~l~s~~~dg~ 232 (379)
T 3jrp_A 167 NGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG-------------HSDWVRDVA-WSPTVLLRSYLASVSQDRT 232 (379)
T ss_dssp ---CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECC-------------CSSCEEEEE-ECCCCSSSEEEEEEETTSC
T ss_pred cCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEec-------------ccCcEeEEE-ECCCCCCCCeEEEEeCCCE
Confidence 578777777778888887 333 1111110000 011245666 4666 777777777788
Q ss_pred EEEEEcCCC
Q 014345 161 IREIQLHFD 169 (426)
Q Consensus 161 Ir~I~l~~~ 169 (426)
|+.+++...
T Consensus 233 i~iwd~~~~ 241 (379)
T 3jrp_A 233 CIIWTQDNE 241 (379)
T ss_dssp EEEEEESST
T ss_pred EEEEeCCCC
Confidence 988887764
No 243
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=84.10 E-value=26 Score=36.37 Aligned_cols=82 Identities=13% Similarity=0.157 Sum_probs=44.2
Q ss_pred CceEEEEcCCCc-EEEEECCCC-----eEEEEeCCCCcccccEEEecCCCCcc-c---ccCCccccc--cc---CCcceE
Q 014345 22 EPYSVEVLPGGE-LLILDSANS-----NLYRISSSLSLYSRPKLVAGSAEGYS-G---HVDGKPREA--RM---NHPKGL 86 (426)
Q Consensus 22 ~P~GIaVd~dG~-LYVaD~~n~-----rI~kid~dg~~~g~v~~vaG~~~G~~-G---~~dG~a~~A--~L---n~P~GI 86 (426)
.+..+++++||. |+++....+ .|+.++.++ ++...+........ | ...+..... ++ .....+
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGS---GQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTT---CCEEEEECGGGTC--------------------CCEESCCC
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCC---CceeEccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 588999999998 555554244 899999875 33333332100000 0 000000000 00 114678
Q ss_pred EEcCCCC-EEEEECCCCEEEEEc
Q 014345 87 TVDDRGN-IYIADTMNMAIRKIS 108 (426)
Q Consensus 87 aVd~dG~-LYVADt~N~rIrk~d 108 (426)
++++||+ |+++.. +.|+.++
T Consensus 115 ~~SpDg~~l~~~~~--~~i~~~d 135 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG--GELYLYD 135 (741)
T ss_dssp EECTTSSEEEEEET--TEEEEEE
T ss_pred EECCCCCEEEEEeC--CcEEEEE
Confidence 9999997 555554 7888888
No 244
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=84.02 E-value=20 Score=37.03 Aligned_cols=65 Identities=8% Similarity=0.062 Sum_probs=40.8
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
.+..+++++|+.|+++. ++.|+.++..+ ++...+.... + ....+++++||+.++. ..+
T Consensus 83 ~v~~~~~spd~~~~~~~--~~~i~~~d~~~---~~~~~l~~~~--------~--------~~~~~~~SpdG~~la~-~~~ 140 (706)
T 2z3z_A 83 PSFRTLDAGRGLVVLFT--QGGLVGFDMLA---RKVTYLFDTN--------E--------ETASLDFSPVGDRVAY-VRN 140 (706)
T ss_dssp CCEEEEETTTTEEEEEE--TTEEEEEETTT---TEEEEEECCT--------T--------CCTTCEECTTSSEEEE-EET
T ss_pred CceeEEECCCCeEEEEE--CCEEEEEECCC---CceEEccCCc--------c--------cccCCcCCCCCCEEEE-EEC
Confidence 57899999996666653 48999999875 3343333221 0 1355788888863332 134
Q ss_pred CEEEEEc
Q 014345 102 MAIRKIS 108 (426)
Q Consensus 102 ~rIrk~d 108 (426)
+.|+.++
T Consensus 141 ~~i~v~~ 147 (706)
T 2z3z_A 141 HNLYIAR 147 (706)
T ss_dssp TEEEEEE
T ss_pred CeEEEEe
Confidence 6777777
No 245
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=83.62 E-value=9.6 Score=35.41 Aligned_cols=112 Identities=13% Similarity=0.006 Sum_probs=67.0
Q ss_pred ceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC--CCCEEEEECC
Q 014345 23 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD--RGNIYIADTM 100 (426)
Q Consensus 23 P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~--dG~LYVADt~ 100 (426)
-..|+++++|+++++-...+.|..++........+..+.|. .+ .-..|++.+ +|+++++=..
T Consensus 16 V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH--------~~--------~V~~v~~~~~~~~~~l~s~s~ 79 (316)
T 3bg1_A 16 IHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGH--------EG--------PVWQVAWAHPMYGNILASCSY 79 (316)
T ss_dssp EEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECC--------SS--------CEEEEEECCGGGSSCEEEEET
T ss_pred EEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCC--------Cc--------cEEEEEeCCCCCCCEEEEEEC
Confidence 57899999999888888888898888753210011222222 11 135677754 3676666666
Q ss_pred CCEEEEEc--CCCc---EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCC--CeEEEEECCCCeEEEEEcCC
Q 014345 101 NMAIRKIS--DSGV---TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSS--CSLLVIDRGNRAIREIQLHF 168 (426)
Q Consensus 101 N~rIrk~d--~g~V---stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~--G~LYVaDsgN~rIr~I~l~~ 168 (426)
++.|+.++ .+.. .++.+- -.....|++ .++ +.++++-...+.|+.++...
T Consensus 80 D~~v~iWd~~~~~~~~~~~~~~h-----------------~~~V~~v~~-~p~~~g~~lasgs~D~~i~lwd~~~ 136 (316)
T 3bg1_A 80 DRKVIIWREENGTWEKSHEHAGH-----------------DSSVNSVCW-APHDYGLILACGSSDGAISLLTYTG 136 (316)
T ss_dssp TSCEEEECCSSSCCCEEEEECCC-----------------SSCCCEEEE-CCTTTCSCEEEECSSSCEEEEEECS
T ss_pred CCEEEEEECCCCcceEEEEccCC-----------------CCceEEEEE-CCCCCCcEEEEEcCCCCEEEEecCC
Confidence 78888888 3322 222221 012356664 443 66777777778888887654
No 246
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=83.59 E-value=22 Score=30.99 Aligned_cols=72 Identities=13% Similarity=0.075 Sum_probs=41.0
Q ss_pred cceEEEcCCCCEEEEECCCCEEEEEc-CC--CcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCe-EEEEEC--
Q 014345 83 PKGLTVDDRGNIYIADTMNMAIRKIS-DS--GVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCS-LLVIDR-- 156 (426)
Q Consensus 83 P~GIaVd~dG~LYVADt~N~rIrk~d-~g--~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~-LYVaDs-- 156 (426)
...++++++|+.+++.. +..|+.++ .+ ....+..... -....+++ +.+++. |+++..
T Consensus 44 v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~---------------~~~~~~~~-~spdg~~l~~~~~~~ 106 (297)
T 2ojh_A 44 FEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFA---------------TICNNDHG-ISPDGALYAISDKVE 106 (297)
T ss_dssp CEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTC---------------CCBCSCCE-ECTTSSEEEEEECTT
T ss_pred eEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccc---------------cccccceE-ECCCCCEEEEEEeCC
Confidence 56799999998665544 67899888 33 3443332110 01234566 455554 444442
Q ss_pred -CCCeEEEEEcCCCce
Q 014345 157 -GNRAIREIQLHFDDC 171 (426)
Q Consensus 157 -gN~rIr~I~l~~~~~ 171 (426)
+..+|+.+++.+...
T Consensus 107 ~~~~~l~~~~~~~~~~ 122 (297)
T 2ojh_A 107 FGKSAIYLLPSTGGTP 122 (297)
T ss_dssp TSSCEEEEEETTCCCC
T ss_pred CCcceEEEEECCCCce
Confidence 357788887765443
No 247
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=83.55 E-value=5.7 Score=42.40 Aligned_cols=116 Identities=10% Similarity=0.005 Sum_probs=64.7
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCC--CCEEEEEC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR--GNIYIADT 99 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~d--G~LYVADt 99 (426)
.-++++++++|+++++-..++.|..++..+.....+..+.+. . ..-..|++.++ |+++++-.
T Consensus 11 ~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h--------~--------~~V~~l~~s~~~~~~~l~s~s 74 (753)
T 3jro_A 11 LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGH--------E--------GPVWRVDWAHPKFGTILASCS 74 (753)
T ss_dssp CEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCC--------S--------SCEEEEEECCTTSCSEEEEEE
T ss_pred eeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCC--------c--------CceEEEEecCCCCCCEEEEEe
Confidence 467888999998777776788888887753210111222121 1 12357788766 77777766
Q ss_pred CCCEEEEEc--CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCC--CeEEEEECCCCeEEEEEcCC
Q 014345 100 MNMAIRKIS--DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSS--CSLLVIDRGNRAIREIQLHF 168 (426)
Q Consensus 100 ~N~rIrk~d--~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~--G~LYVaDsgN~rIr~I~l~~ 168 (426)
.++.|+.++ .+....+.... ++ -.....++ +.++ +.++++-..++.|+.+++..
T Consensus 75 ~Dg~I~vwd~~~~~~~~~~~~~-----~h---------~~~V~~v~-~sp~~~~~~l~sgs~dg~I~vwdl~~ 132 (753)
T 3jro_A 75 YDGKVLIWKEENGRWSQIAVHA-----VH---------SASVNSVQ-WAPHEYGPLLLVASSDGKVSVVEFKE 132 (753)
T ss_dssp TTSCEEEEEEETTEEEEEEEEC-----CC---------SSCEEEEE-ECCGGGCSEEEEEETTSEEEEEECCS
T ss_pred CCCeEEEEECCCCccccccccc-----CC---------CCCeEEEE-ECCCCCCCEEEEEeCCCcEEEEEeec
Confidence 678888887 43322221100 00 01234455 3444 55555555566777777654
No 248
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=83.03 E-value=5 Score=44.27 Aligned_cols=74 Identities=5% Similarity=-0.095 Sum_probs=46.8
Q ss_pred EEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEe---cCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 25 SVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVA---GSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 25 GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~va---G~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
.|++.++|+++++-...+.|..++..+........+. ....+ .|+ -.....|+++++|.+.++-..+
T Consensus 440 sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~-~~h---------~~~V~svafspdg~~LAsgs~D 509 (902)
T 2oaj_A 440 QKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLN-KAK---------ELAVDKISFAAETLELAVSIET 509 (902)
T ss_dssp CCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTT-CSS---------SCCEEEEEEETTTTEEEEEETT
T ss_pred cccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcC-CCC---------CCceeEEEecCCCCeEEEEecC
Confidence 4566788999999888999999998753211100000 00000 011 1236789999999988777777
Q ss_pred CEEEEEc
Q 014345 102 MAIRKIS 108 (426)
Q Consensus 102 ~rIrk~d 108 (426)
+.|+.++
T Consensus 510 gtV~lwd 516 (902)
T 2oaj_A 510 GDVVLFK 516 (902)
T ss_dssp SCEEEEE
T ss_pred cEEEEEE
Confidence 8888777
No 249
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=82.47 E-value=35 Score=32.55 Aligned_cols=115 Identities=12% Similarity=0.073 Sum_probs=67.3
Q ss_pred ceEEE--EcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECC
Q 014345 23 PYSVE--VLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 100 (426)
Q Consensus 23 P~GIa--Vd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~ 100 (426)
...++ ..+++.++++-...+.|..++..... .+..+.+.. + -.....|+++++|+++++-..
T Consensus 171 ~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~-----h---------~~~v~~~~~s~~~~~l~s~~~ 234 (437)
T 3gre_A 171 AVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLE--RLQIIENSP-----R---------HGAVSSICIDEECCVLILGTT 234 (437)
T ss_dssp EEEEEEEECSSCEEEEEEETTSEEEEEETTTCC--EEEEEECCG-----G---------GCCEEEEEECTTSCEEEEEET
T ss_pred ceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCe--eeEEEccCC-----C---------CCceEEEEECCCCCEEEEEcC
Confidence 34444 44678888887788999999986421 223332210 0 123578999999998887777
Q ss_pred CCEEEEEc-C-CC-cEEEe-CCccCCCCCCCCCCcccccCCCCCeeEE---ECCCCeEEEEECCCCeEEEEEcCCCc
Q 014345 101 NMAIRKIS-D-SG-VTTIA-GGKWGRGGGHVDGPSEDAKFSNDFDVVY---IGSSCSLLVIDRGNRAIREIQLHFDD 170 (426)
Q Consensus 101 N~rIrk~d-~-g~-VstIa-Gg~~g~~~G~~dG~~~~a~f~~P~gIa~---vd~~G~LYVaDsgN~rIr~I~l~~~~ 170 (426)
++.|+.+| . +. +.++. +... .-..|++ ..+++.++++-..++.|+.+++....
T Consensus 235 dg~i~iwd~~~~~~~~~~~~~~~~-----------------~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 294 (437)
T 3gre_A 235 RGIIDIWDIRFNVLIRSWSFGDHA-----------------PITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGH 294 (437)
T ss_dssp TSCEEEEETTTTEEEEEEBCTTCE-----------------EEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTE
T ss_pred CCeEEEEEcCCccEEEEEecCCCC-----------------ceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCc
Confidence 88899998 3 33 23332 2100 0122321 12345666666666777777776544
No 250
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=82.35 E-value=26 Score=37.25 Aligned_cols=118 Identities=13% Similarity=0.097 Sum_probs=69.1
Q ss_pred CceEEEEcCC--CcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC---------
Q 014345 22 EPYSVEVLPG--GELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD--------- 90 (426)
Q Consensus 22 ~P~GIaVd~d--G~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~--------- 90 (426)
...++++.++ |+++++-..++.|..++...........+.+. -.....+++++
T Consensus 101 ~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~----------------~~~v~~l~~~p~~~~~~~~~ 164 (753)
T 3jro_A 101 SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH----------------AIGVNSASWAPATIEEDGEH 164 (753)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECC----------------SSCEEEEEECCCC-------
T ss_pred CeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecC----------------CCceEEEEecCccccccccc
Confidence 5678888887 77777777788888888764211112222221 11234566666
Q ss_pred ----CCCEEEEECCCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCC---CeEEEEECCCCe
Q 014345 91 ----RGNIYIADTMNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSS---CSLLVIDRGNRA 160 (426)
Q Consensus 91 ----dG~LYVADt~N~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~---G~LYVaDsgN~r 160 (426)
++.++++-..++.|+.++ .+. ...+..... ++ -....+|+ +.++ +.++++-...+.
T Consensus 165 ~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~----~h---------~~~V~~l~-~sp~~~~~~~l~s~s~Dg~ 230 (753)
T 3jro_A 165 NGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE----GH---------SDWVRDVA-WSPTVLLRSYLASVSQDRT 230 (753)
T ss_dssp --CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEEC----CC---------SSCEEEEE-ECCCCSSSEEEEEEESSSC
T ss_pred ccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeec----CC---------CCcEEEEE-eccCCCCCCEEEEEecCCE
Confidence 467676666678888887 332 111111000 00 01245677 4666 787777777889
Q ss_pred EEEEEcCCC
Q 014345 161 IREIQLHFD 169 (426)
Q Consensus 161 Ir~I~l~~~ 169 (426)
|+.+++...
T Consensus 231 I~iwd~~~~ 239 (753)
T 3jro_A 231 CIIWTQDNE 239 (753)
T ss_dssp EEEEEESSS
T ss_pred EEEecCCCC
Confidence 999988764
No 251
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=82.10 E-value=15 Score=40.32 Aligned_cols=111 Identities=11% Similarity=0.066 Sum_probs=69.7
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
...+|+++++|.++++-...+.|+.++..+. ........ . ..-..|++.+ |.+.++=..+
T Consensus 19 ~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~---~~~~~~~~--------~--------~~V~~l~fsp-g~~L~S~s~D 78 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATVTGEVHIYGQQQV---EVVIKLED--------R--------SAIKEMRFVK-GIYLVVINAK 78 (902)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEECSTTC---EEEEECSS--------C--------CCEEEEEEET-TTEEEEEETT
T ss_pred CcEEEEECCCCCEEEEEeCCCEEEEEeCCCc---EEEEEcCC--------C--------CCEEEEEEcC-CCEEEEEECc
Confidence 5789999999998888888899999987632 22111111 0 0135788988 7744444457
Q ss_pred CEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 014345 102 MAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 171 (426)
Q Consensus 102 ~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~ 171 (426)
+.|+.++ .+. +.++... .....++ +++++.++++-..++.|+.+++....+
T Consensus 79 ~~v~lWd~~~~~~~~~~~~~------------------~~V~~v~-~sp~g~~l~sgs~dg~V~lwd~~~~~~ 132 (902)
T 2oaj_A 79 DTVYVLSLYSQKVLTTVFVP------------------GKITSID-TDASLDWMLIGLQNGSMIVYDIDRDQL 132 (902)
T ss_dssp CEEEEEETTTCSEEEEEECS------------------SCEEEEE-CCTTCSEEEEEETTSCEEEEETTTTEE
T ss_pred CeEEEEECCCCcEEEEEcCC------------------CCEEEEE-ECCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 8899988 333 3333210 0134555 456666555555677888888776544
No 252
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=82.00 E-value=35 Score=32.57 Aligned_cols=130 Identities=9% Similarity=0.105 Sum_probs=71.0
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEE-EecCCC-CcccccCCcccccccCCcceEE--EcCCCCEEEE
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKL-VAGSAE-GYSGHVDGKPREARMNHPKGLT--VDDRGNIYIA 97 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~-vaG~~~-G~~G~~dG~a~~A~Ln~P~GIa--Vd~dG~LYVA 97 (426)
...+|++.++++++++-...+.|..++.+....+.... ..+... ...-..++ .-.....++ ..+++.++++
T Consensus 113 ~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~ 187 (437)
T 3gre_A 113 TVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFG-----KNEYAVRMRAFVNEEKSLLVA 187 (437)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGS-----SCCCEEEEEEEECSSCEEEEE
T ss_pred CEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcc-----cccCceEEEEEEcCCCCEEEE
Confidence 46788999988877777777888887663100011111 111100 00000000 001122333 4467887777
Q ss_pred ECCCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceE
Q 014345 98 DTMNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCA 172 (426)
Q Consensus 98 Dt~N~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~ 172 (426)
-..++.|+.+| .+. +.++.+... -.....++ +.+++.++++-..++.|+.+++....+.
T Consensus 188 ~~~d~~i~iwd~~~~~~~~~~~~~~h---------------~~~v~~~~-~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 249 (437)
T 3gre_A 188 LTNLSRVIIFDIRTLERLQIIENSPR---------------HGAVSSIC-IDEECCVLILGTTRGIIDIWDIRFNVLI 249 (437)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCGG---------------GCCEEEEE-ECTTSCEEEEEETTSCEEEEETTTTEEE
T ss_pred EeCCCeEEEEeCCCCeeeEEEccCCC---------------CCceEEEE-ECCCCCEEEEEcCCCeEEEEEcCCccEE
Confidence 77789999999 333 344443100 01345666 4667777776667788888888765554
No 253
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=81.96 E-value=57 Score=34.72 Aligned_cols=72 Identities=11% Similarity=0.040 Sum_probs=49.2
Q ss_pred ceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccc-----cEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEE
Q 014345 23 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSR-----PKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIA 97 (426)
Q Consensus 23 P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~-----v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVA 97 (426)
-++++++|||.++++-...+.|..++..+..... +.++-+.. .|+ .+.-..|++.++| +++
T Consensus 132 v~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~---~gh---------~~~V~sVawSPdg--Laa 197 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSD---AGS---------KDWVTHIVWYEDV--LVA 197 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSC---TTC---------CCCEEEEEEETTE--EEE
T ss_pred EEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeeccc---ccc---------cccEEEEEEcCCc--EEE
Confidence 5789999999977777788999999988642111 23332221 122 2345789999999 556
Q ss_pred ECCCCEEEEEc
Q 014345 98 DTMNMAIRKIS 108 (426)
Q Consensus 98 Dt~N~rIrk~d 108 (426)
-...+.|+.++
T Consensus 198 ss~D~tVrlWd 208 (588)
T 2j04_A 198 ALSNNSVFSMT 208 (588)
T ss_dssp EETTCCEEEEC
T ss_pred EeCCCeEEEEE
Confidence 56678899888
No 254
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=81.57 E-value=3.9 Score=40.82 Aligned_cols=116 Identities=7% Similarity=-0.087 Sum_probs=68.6
Q ss_pred CceEEEEcCCCcEEE----EECCCCeEEEEeCCCCccc-----c-cEEEecCCCCcccccCCcccccccCCcceEEEcCC
Q 014345 22 EPYSVEVLPGGELLI----LDSANSNLYRISSSLSLYS-----R-PKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR 91 (426)
Q Consensus 22 ~P~GIaVd~dG~LYV----aD~~n~rI~kid~dg~~~g-----~-v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~d 91 (426)
...+|+++++|++++ +-...+.|..++......+ + +..+. . ..|+ -....+|++.++
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~-~---~~~h---------~~~V~~v~~~p~ 160 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHK-L---LKDA---------GGMVIDMKWNPT 160 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEE-C---CCSG---------GGSEEEEEECSS
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeee-c---cCCC---------CCceEEEEECCC
Confidence 478999999998665 4555678888876421000 0 00010 0 0111 113578999987
Q ss_pred -CCEEEEECCCCEEEEEc-CCCcEE--EeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcC
Q 014345 92 -GNIYIADTMNMAIRKIS-DSGVTT--IAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLH 167 (426)
Q Consensus 92 -G~LYVADt~N~rIrk~d-~g~Vst--IaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~ 167 (426)
++++++-..++.|+.+| ..+... ..+. -....+++ ..++|..+++-..++.|+.++..
T Consensus 161 ~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~-----------------~~~v~~v~-wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 161 VPSMVAVCLADGSIAVLQVTETVKVCATLPS-----------------TVAVTSVC-WSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp CTTEEEEEETTSCEEEEEESSSEEEEEEECG-----------------GGCEEEEE-ECTTSSCEEEEETTSCEEEECTT
T ss_pred CCCEEEEEECCCeEEEEEcCCCcceeeccCC-----------------CCceeEEE-EcCCCCEEEEEcCCCcEEEEccC
Confidence 78887766788899888 333221 1110 01346677 46667666666677889988887
Q ss_pred C
Q 014345 168 F 168 (426)
Q Consensus 168 ~ 168 (426)
+
T Consensus 223 ~ 223 (434)
T 2oit_A 223 L 223 (434)
T ss_dssp C
T ss_pred C
Confidence 3
No 255
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=81.57 E-value=31 Score=31.31 Aligned_cols=126 Identities=10% Similarity=0.023 Sum_probs=63.9
Q ss_pred CceEEEEcCC---CcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEE
Q 014345 22 EPYSVEVLPG---GELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIAD 98 (426)
Q Consensus 22 ~P~GIaVd~d---G~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVAD 98 (426)
...++++.++ |+++++-..++.|..++..... ..+..+.+.. +... .+....+++++++++++++-
T Consensus 67 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~--------~~v~--~~~~~~~~~~s~~~~~l~~~ 135 (357)
T 3i2n_A 67 PIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPE-MPVYSVKGHK--------EIIN--AIDGIGGLGIGEGAPEIVTG 135 (357)
T ss_dssp CEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCS-SCSEEECCCS--------SCEE--EEEEESGGGCC-CCCEEEEE
T ss_pred cEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCC-ccEEEEEecc--------cceE--EEeeccccccCCCccEEEEE
Confidence 4567888887 5766666677888888876421 1233332221 1000 01111122456778877777
Q ss_pred CCCCEEEEEc--CCC--cEEEeCCccCCCCCCCCCCcccccCCCCCeeEE---ECCCCeEEEEECCCCeEEEEEcCCCce
Q 014345 99 TMNMAIRKIS--DSG--VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVY---IGSSCSLLVIDRGNRAIREIQLHFDDC 171 (426)
Q Consensus 99 t~N~rIrk~d--~g~--VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~---vd~~G~LYVaDsgN~rIr~I~l~~~~~ 171 (426)
..++.|+.++ .+. +.++..... . .. .....+++ ..+++.++++-..++.|+.+++....+
T Consensus 136 ~~d~~i~vwd~~~~~~~~~~~~~~~~-~----~~--------~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 202 (357)
T 3i2n_A 136 SRDGTVKVWDPRQKDDPVANMEPVQG-E----NK--------RDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL 202 (357)
T ss_dssp ETTSCEEEECTTSCSSCSEEECCCTT-S----CC--------CCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE
T ss_pred eCCCeEEEEeCCCCCCcceeccccCC-C----CC--------CceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce
Confidence 6778899888 332 344432110 0 00 01122221 235566666655667777777766544
No 256
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=80.98 E-value=8.1 Score=39.20 Aligned_cols=71 Identities=10% Similarity=0.111 Sum_probs=39.2
Q ss_pred ceEEEcCCCCEEEE---ECCC-CEEEEEc--CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCe-EEEEEC
Q 014345 84 KGLTVDDRGNIYIA---DTMN-MAIRKIS--DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCS-LLVIDR 156 (426)
Q Consensus 84 ~GIaVd~dG~LYVA---Dt~N-~rIrk~d--~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~-LYVaDs 156 (426)
..+++++||+.+++ |..+ ..|+.++ .+...++.+... ....++ ..++|. |+.++.
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~-----------------~~~~~~-~SpDG~~l~~~~~ 214 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEG-----------------SFSSAS-ISPGMKVTAGLET 214 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSC-----------------EEEEEE-ECTTSCEEEEEEC
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCC-----------------ccccce-ECCCCCEEEEccC
Confidence 57889999985552 2222 5688888 344666644210 114455 355554 444443
Q ss_pred CC-CeEEEEEcCCCceE
Q 014345 157 GN-RAIREIQLHFDDCA 172 (426)
Q Consensus 157 gN-~rIr~I~l~~~~~~ 172 (426)
.+ ..|+.+++++..+.
T Consensus 215 ~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 215 AREARLVTVDPRDGSVE 231 (582)
T ss_dssp SSCEEEEEECTTTCCEE
T ss_pred CCeeEEEEEcCCCCcEE
Confidence 22 26777777655443
No 257
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=80.21 E-value=33 Score=30.89 Aligned_cols=81 Identities=10% Similarity=0.202 Sum_probs=51.8
Q ss_pred EEEEecCCCCCCCceEEEEcCC-CcEEEEECCCCeEEEEeCCCCcc--ccc-EEEecCCCCcccccCCcccccccCCcce
Q 014345 10 VETVFDGSKLGIEPYSVEVLPG-GELLILDSANSNLYRISSSLSLY--SRP-KLVAGSAEGYSGHVDGKPREARMNHPKG 85 (426)
Q Consensus 10 v~tv~~g~~l~~~P~GIaVd~d-G~LYVaD~~n~rI~kid~dg~~~--g~v-~~vaG~~~G~~G~~dG~a~~A~Ln~P~G 85 (426)
++..+.|.. ..-++|++.|+ ++++++-...+.|..++...... +.. ..+.| + -.....
T Consensus 30 l~~tL~GH~--~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~-------h---------~~~V~~ 91 (340)
T 4aow_A 30 LRGTLKGHN--GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG-------H---------SHFVSD 91 (340)
T ss_dssp EEEEECCCS--SCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECC-------C---------SSCEEE
T ss_pred EEEEECCcc--CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeC-------C---------CCCEEE
Confidence 333444544 24689999986 67888777778888887653210 111 11111 1 123568
Q ss_pred EEEcCCCCEEEEECCCCEEEEEc
Q 014345 86 LTVDDRGNIYIADTMNMAIRKIS 108 (426)
Q Consensus 86 IaVd~dG~LYVADt~N~rIrk~d 108 (426)
+++.++|+++++-..++.|+.++
T Consensus 92 ~~~s~dg~~l~s~~~d~~i~~~~ 114 (340)
T 4aow_A 92 VVISSDGQFALSGSWDGTLRLWD 114 (340)
T ss_dssp EEECTTSSEEEEEETTSEEEEEE
T ss_pred EEECCCCCEEEEEcccccceEEe
Confidence 99999999888777788898888
No 258
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=80.12 E-value=15 Score=39.30 Aligned_cols=117 Identities=12% Similarity=0.091 Sum_probs=72.2
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
.-.+++.+|||..+++-+.++.|+.++.+ +.+..+. .. . .... ..-..|++.++|++.++-..+
T Consensus 87 ~V~~vawSPdG~~LAs~s~dg~V~iwd~~----~~l~~l~-~~-~---~~~~-------~sv~svafSPDG~~LAsgs~D 150 (588)
T 2j04_A 87 YPRVCKPSPIDDWMAVLSNNGNVSVFKDN----KMLTNLD-SK-G---NLSS-------RTYHCFEWNPIESSIVVGNED 150 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSCEEEEETT----EEEEECC-CS-S---CSTT-------TCEEEEEECSSSSCEEEEETT
T ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEeCC----ceeeecc-CC-C---cccc-------ccEEEEEEcCCCCEEEEEcCC
Confidence 57899999999977777788889999865 2222221 10 0 0000 013589999999877776678
Q ss_pred CEEEEEc-CCC-c--------EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCc
Q 014345 102 MAIRKIS-DSG-V--------TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDD 170 (426)
Q Consensus 102 ~rIrk~d-~g~-V--------stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~ 170 (426)
+.|+.++ .++ . .++-+... | ...+-..|++ .++| +++-...+.|+.+++.+..
T Consensus 151 GtVkIWd~~~~~l~~~~~i~l~ti~~~~~----g---------h~~~V~sVaw-SPdg--Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 151 GELQFFSIRKNSENTPEFYFESSIRLSDA----G---------SKDWVTHIVW-YEDV--LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp SEEEEEECCCCTTTCCCCEEEEEEECSCT----T---------CCCCEEEEEE-ETTE--EEEEETTCCEEEECCCSSS
T ss_pred CEEEEEECCCCccccccceeeeeeecccc----c---------ccccEEEEEE-cCCc--EEEEeCCCeEEEEECCCCc
Confidence 9999999 333 2 44432211 1 1134567774 4566 4555567888888877655
No 259
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=77.45 E-value=10 Score=39.50 Aligned_cols=66 Identities=11% Similarity=0.104 Sum_probs=40.3
Q ss_pred ceEEEEcCCCc-EEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCC-EEEEECC
Q 014345 23 PYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADTM 100 (426)
Q Consensus 23 P~GIaVd~dG~-LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LYVADt~ 100 (426)
...+++++||. |+++.. +.|+.++.++.....+..+.+. -.....+++++||+ |+++.
T Consensus 111 v~~~~~SpDg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~~----------------~~~~~~~~~SPDG~~la~~~-- 170 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG--GELYLYDLKQEGKAAVRQLTHG----------------EGFATDAKLSPKGGFVSFIR-- 170 (741)
T ss_dssp SCCCEECTTSSEEEEEET--TEEEEEESSSCSTTSCCBCCCS----------------SSCEEEEEECTTSSEEEEEE--
T ss_pred cceeEECCCCCEEEEEeC--CcEEEEECCCCCcceEEEcccC----------------CcccccccCCCCCCEEEEEe--
Confidence 46789999998 455543 8899998875300022222111 01256789999987 44443
Q ss_pred CCEEEEEc
Q 014345 101 NMAIRKIS 108 (426)
Q Consensus 101 N~rIrk~d 108 (426)
++.|+.++
T Consensus 171 ~~~i~~~d 178 (741)
T 2ecf_A 171 GRNLWVID 178 (741)
T ss_dssp TTEEEEEE
T ss_pred CCcEEEEe
Confidence 35788888
No 260
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=76.53 E-value=47 Score=30.60 Aligned_cols=85 Identities=15% Similarity=0.091 Sum_probs=48.9
Q ss_pred CceEEEEcCCCc-EEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECC
Q 014345 22 EPYSVEVLPGGE-LLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 100 (426)
Q Consensus 22 ~P~GIaVd~dG~-LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~ 100 (426)
...++++.+++. ++++-...+.|..++..... ..+..+-... +......-......-.....++++++|+.+++-..
T Consensus 188 ~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 265 (408)
T 4a11_B 188 EILAVSWSPRYDYILATASADSRVKLWDVRRAS-GCLITLDQHN-GKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGT 265 (408)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTCSS-CCSEECCTTT-TCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEET
T ss_pred cEEEEEECCCCCcEEEEEcCCCcEEEEECCCCC-cccccccccc-cccceeeccccccccCceeEEEEcCCCCEEEEecC
Confidence 467889999887 67666677888888876321 1222221110 00000000000111233568999999987777667
Q ss_pred CCEEEEEc
Q 014345 101 NMAIRKIS 108 (426)
Q Consensus 101 N~rIrk~d 108 (426)
++.|+.++
T Consensus 266 dg~i~vwd 273 (408)
T 4a11_B 266 DNRMRLWN 273 (408)
T ss_dssp TSCEEEEE
T ss_pred CCeEEEEE
Confidence 78899998
No 261
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=75.88 E-value=37 Score=31.56 Aligned_cols=64 Identities=9% Similarity=0.140 Sum_probs=36.5
Q ss_pred EEEcCCCc-EEEEEC--CCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCC-EEEEECCC
Q 014345 26 VEVLPGGE-LLILDS--ANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIADTMN 101 (426)
Q Consensus 26 IaVd~dG~-LYVaD~--~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LYVADt~N 101 (426)
.+++|||. |+++.. ++.+|+.++.++ +....+.... .. ...+++++++|. |+++.. +
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~---g~~~~lt~~~---~~------------~~~~~~~spdg~~l~~~~~-~ 101 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNT---QVATQLTEGR---GD------------NTFGGFLSPDDDALFYVKD-G 101 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTT---CEEEECCCSS---CB------------CSSSCEECTTSSEEEEEET-T
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCC---CceEEeeeCC---CC------------CccceEEcCCCCEEEEEeC-C
Confidence 57899997 444433 334799999875 3333332110 00 012457888886 555553 4
Q ss_pred CEEEEEc
Q 014345 102 MAIRKIS 108 (426)
Q Consensus 102 ~rIrk~d 108 (426)
..|+.++
T Consensus 102 ~~l~~~d 108 (388)
T 3pe7_A 102 RNLMRVD 108 (388)
T ss_dssp TEEEEEE
T ss_pred CeEEEEE
Confidence 6788887
No 262
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=75.02 E-value=60 Score=31.07 Aligned_cols=109 Identities=10% Similarity=0.040 Sum_probs=61.4
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
.-.+|+++++|+++++-...+.|..++..... .+....|.. + .-.++..++.+.++-...
T Consensus 149 ~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~--~~~~~~~h~----~--------------~v~~~s~~~~~l~sgs~d 208 (420)
T 4gga_A 149 YISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK--RLRNMTSHS----A--------------RVGSLSWNSYILSSGSRS 208 (420)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCCS----S--------------CEEEEEEETTEEEEEETT
T ss_pred cEEEEEECCCCCEEEEEECCCeEEEEEcCCCc--EEEEEeCCC----C--------------ceEEEeeCCCEEEEEeCC
Confidence 35788888888877777778888888876421 122222210 0 112333356677776667
Q ss_pred CEEEEEc-CC-C--cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 014345 102 MAIRKIS-DS-G--VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 168 (426)
Q Consensus 102 ~rIrk~d-~g-~--VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~ 168 (426)
..|+.++ .. . +.++.+.. .....+. ..+++.++++-...+.|+.++...
T Consensus 209 ~~i~~~d~~~~~~~~~~~~~h~-----------------~~~~~~~-~~~~g~~l~s~~~D~~v~i~~~~~ 261 (420)
T 4gga_A 209 GHIHHHDVRVAEHHVATLSGHS-----------------QEVCGLR-WAPDGRHLASGGNDNLVNVWPSAP 261 (420)
T ss_dssp SEEEEEETTSSSCEEEEEECCS-----------------SCEEEEE-ECTTSSEEEEEETTSCEEEEESSC
T ss_pred CceeEeeecccceeeEEecccc-----------------cceeeee-ecCCCCeeeeeeccccceEEeecc
Confidence 7787777 22 1 33343311 1123344 456666666666667777776654
No 263
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=74.90 E-value=14 Score=38.22 Aligned_cols=72 Identities=3% Similarity=-0.076 Sum_probs=44.4
Q ss_pred CCceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEE-EEEC
Q 014345 21 IEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIY-IADT 99 (426)
Q Consensus 21 ~~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LY-VADt 99 (426)
..+..+++.+||.++++ ...+.|+.++..+ ++...+...... . -.....+++++||+.. ++..
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~---g~~~~~~~~~~~---~---------~~~v~~~~~SpDg~~l~~~~~ 80 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVET---NTSTVLIEGKKI---E---------SLRAIRYEISPDREYALFSYN 80 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGG---CCCEEEECTTTT---T---------TTTCSEEEECTTSSEEEEEES
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCC---CcEEEEeccccc---c---------ccccceEEECCCCCEEEEEec
Confidence 35788899999996655 4567899998875 334444322100 0 0135789999999843 3321
Q ss_pred -C-------CCEEEEEc
Q 014345 100 -M-------NMAIRKIS 108 (426)
Q Consensus 100 -~-------N~rIrk~d 108 (426)
. ...|+.++
T Consensus 81 ~~~~~~~~~~~~i~~~d 97 (723)
T 1xfd_A 81 VEPIYQHSYTGYYVLSK 97 (723)
T ss_dssp CCCCSSSCCCSEEEEEE
T ss_pred CccceeecceeeEEEEE
Confidence 1 25677777
No 264
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=73.13 E-value=39 Score=35.70 Aligned_cols=108 Identities=9% Similarity=0.081 Sum_probs=63.4
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
.+.+++.|.+|+||++-. +-|.++++.... ...+. . +|.. -+...+|+.+ +|+|||+- +
T Consensus 518 ~~~~i~~d~~g~lWigt~--~Gl~~~~~~~~~---~~~~~-~--------~gl~----~~~i~~i~~~-~g~lWi~t--~ 576 (758)
T 3ott_A 518 SPNYLLCDEDGLLWVGFH--GGVMRINPKDES---QQSIS-F--------GSFS----NNEILSMTCV-KNSIWVST--T 576 (758)
T ss_dssp CEEEEEECTTSCEEEEET--TEEEEECC--CC---CCBCC-C--------CC-------CCEEEEEEE-TTEEEEEE--S
T ss_pred ccceEEECCCCCEEEEec--CceEEEecCCCc---eEEec-c--------cCCC----ccceEEEEEC-CCCEEEEC--C
Confidence 578899999999999863 469999886422 11110 0 1111 1345677776 89999997 3
Q ss_pred CEEEEEcCCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 014345 102 MAIRKISDSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 168 (426)
Q Consensus 102 ~rIrk~d~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~ 168 (426)
+-|.+++... .....+.. ...|. ..++.+.+|.||+.-. +-+..|++..
T Consensus 577 ~Gl~~~~~~~~~~~~~~~~-------------~~~~~---~~~~~~~~G~l~fG~~--~Gl~~f~p~~ 626 (758)
T 3ott_A 577 NGLWIIDRKTMDARQQNMT-------------NKRFT---SLLFDPKEDCVYLGGA--DGFGISHSNL 626 (758)
T ss_dssp SCEEEEETTTCCEEEC--C-------------CCCCS---EEEEETTTTEEEEECB--SEEEEEEC--
T ss_pred CCeEEEcCCCceeEEecCC-------------CCcee---eeEEECCCCcEEEecC--CceEEEChhh
Confidence 4588888333 22222210 11232 3455678999999864 5688888763
No 265
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=68.07 E-value=86 Score=29.95 Aligned_cols=67 Identities=13% Similarity=0.038 Sum_probs=41.9
Q ss_pred ceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEE-EecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCC
Q 014345 23 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKL-VAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 23 P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~-vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N 101 (426)
.+-|+.++++-|-|+- .+.|+.++... |++.. +-... + -..-+.|++.++|+++++-+.+
T Consensus 108 ~~~l~wS~~n~lAvgl--d~tV~lWd~~t---g~~~~~~~~~~-----~---------~~~V~sv~fspdg~~lasgs~D 168 (420)
T 4gga_A 108 LNLVDWSSGNVLAVAL--DNSVYLWSASS---GDILQLLQMEQ-----P---------GEYISSVAWIKEGNYLAVGTSS 168 (420)
T ss_dssp CBCEEECTTSEEEEEE--TTEEEEEETTT---CCEEEEEECCS-----T---------TCCEEEEEECTTSSEEEEEETT
T ss_pred ceeEEECCCCEEEEEe--CCEEEEEECCC---CCEEEEEEecC-----C---------CCcEEEEEECCCCCEEEEEECC
Confidence 4456666554344443 56888888774 33322 22211 0 1123679999999988887778
Q ss_pred CEEEEEc
Q 014345 102 MAIRKIS 108 (426)
Q Consensus 102 ~rIrk~d 108 (426)
+.|+.++
T Consensus 169 g~v~iWd 175 (420)
T 4gga_A 169 AEVQLWD 175 (420)
T ss_dssp SCEEEEE
T ss_pred CeEEEEE
Confidence 8899998
No 266
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=67.60 E-value=67 Score=30.83 Aligned_cols=62 Identities=8% Similarity=0.099 Sum_probs=38.0
Q ss_pred EEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCCCEEEE
Q 014345 27 EVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNMAIRK 106 (426)
Q Consensus 27 aVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N~rIrk 106 (426)
++..+|+++++-..++.|..++..... ....+.|. .+ .-..|++ +++++++-..++.|+.
T Consensus 138 ~~~~d~~~l~~g~~dg~i~iwd~~~~~--~~~~~~~h--------~~--------~v~~l~~--~~~~l~sg~~dg~i~v 197 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDNTIKIWDKNTLE--CKRILTGH--------TG--------SVLCLQY--DERVIITGSSDSTVRV 197 (435)
T ss_dssp EEECCSSEEEEEESSSCEEEEESSSCC--EEEEECCC--------SS--------CEEEEEC--CSSEEEEEETTSCEEE
T ss_pred EEEECCCEEEEEeCCCeEEEEeCCCCe--EEEEEcCC--------CC--------cEEEEEE--CCCEEEEEcCCCeEEE
Confidence 455578887777788899999886421 12233222 11 1234444 5677776666788888
Q ss_pred Ec
Q 014345 107 IS 108 (426)
Q Consensus 107 ~d 108 (426)
++
T Consensus 198 wd 199 (435)
T 1p22_A 198 WD 199 (435)
T ss_dssp EE
T ss_pred EE
Confidence 88
No 267
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=67.39 E-value=77 Score=29.13 Aligned_cols=85 Identities=8% Similarity=0.019 Sum_probs=47.6
Q ss_pred cceEEEcCCCC-EEEEECCCCEEEEEc--CCC--cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECC
Q 014345 83 PKGLTVDDRGN-IYIADTMNMAIRKIS--DSG--VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRG 157 (426)
Q Consensus 83 P~GIaVd~dG~-LYVADt~N~rIrk~d--~g~--VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsg 157 (426)
...|++.+++. ++++-..++.|+.++ .+. +..+....... .. ..-......-.....++ +.+++.++++-..
T Consensus 189 v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~v~~~~-~~~~~~~l~~~~~ 265 (408)
T 4a11_B 189 ILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKK-SQ-AVESANTAHNGKVNGLC-FTSDGLHLLTVGT 265 (408)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCS-CC-CTTTSSCSCSSCEEEEE-ECTTSSEEEEEET
T ss_pred EEEEEECCCCCcEEEEEcCCCcEEEEECCCCCccccccccccccc-ce-eeccccccccCceeEEE-EcCCCCEEEEecC
Confidence 46789999887 666666678888888 222 23332210000 00 00000011122356677 5677776666666
Q ss_pred CCeEEEEEcCCCc
Q 014345 158 NRAIREIQLHFDD 170 (426)
Q Consensus 158 N~rIr~I~l~~~~ 170 (426)
++.|+.+++....
T Consensus 266 dg~i~vwd~~~~~ 278 (408)
T 4a11_B 266 DNRMRLWNSSNGE 278 (408)
T ss_dssp TSCEEEEETTTCC
T ss_pred CCeEEEEECCCCc
Confidence 7899999987644
No 268
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=67.06 E-value=80 Score=29.22 Aligned_cols=26 Identities=19% Similarity=0.316 Sum_probs=18.3
Q ss_pred EEEEcCCCc-EEEEECCCCeEEEEeCCC
Q 014345 25 SVEVLPGGE-LLILDSANSNLYRISSSL 51 (426)
Q Consensus 25 GIaVd~dG~-LYVaD~~n~rI~kid~dg 51 (426)
++++++||. |+++. .+..|++++..+
T Consensus 85 ~~~~spdg~~l~~~~-~~~~l~~~d~~~ 111 (388)
T 3pe7_A 85 GGFLSPDDDALFYVK-DGRNLMRVDLAT 111 (388)
T ss_dssp SCEECTTSSEEEEEE-TTTEEEEEETTT
T ss_pred ceEEcCCCCEEEEEe-CCCeEEEEECCC
Confidence 567888886 55554 456788888875
No 269
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=66.38 E-value=41 Score=37.12 Aligned_cols=68 Identities=10% Similarity=0.222 Sum_probs=44.1
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEe-cCCCCcccccCCcccccccCCcceEEEcCCCCEE-EEEC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVA-GSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIY-IADT 99 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~va-G~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LY-VADt 99 (426)
.+..+++++||..++.-...+.|+.++..+ +....+. +.. .....+++++||+.+ ++..
T Consensus 380 ~~~~~~~SpDG~~la~~~~~~~v~~~d~~t---g~~~~~~~~~~----------------~~v~~~~~SpDG~~la~~~~ 440 (1045)
T 1k32_A 380 NVFAMGVDRNGKFAVVANDRFEIMTVDLET---GKPTVIERSRE----------------AMITDFTISDNSRFIAYGFP 440 (1045)
T ss_dssp SEEEEEECTTSSEEEEEETTSEEEEEETTT---CCEEEEEECSS----------------SCCCCEEECTTSCEEEEEEE
T ss_pred ceeeeEECCCCCEEEEECCCCeEEEEECCC---CceEEeccCCC----------------CCccceEECCCCCeEEEEec
Confidence 578999999998655555567999999875 3444443 220 113568999999843 3322
Q ss_pred ---------CCCEEEEEc
Q 014345 100 ---------MNMAIRKIS 108 (426)
Q Consensus 100 ---------~N~rIrk~d 108 (426)
.+..|+.++
T Consensus 441 ~~~~~~~~~~~~~i~l~d 458 (1045)
T 1k32_A 441 LKHGETDGYVMQAIHVYD 458 (1045)
T ss_dssp ECSSTTCSCCEEEEEEEE
T ss_pred CccccccCCCCCeEEEEE
Confidence 134788888
No 270
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=65.64 E-value=24 Score=37.23 Aligned_cols=27 Identities=19% Similarity=0.304 Sum_probs=22.1
Q ss_pred ceEEEEcCCCcEEEEECCCCeEEEEeCCC
Q 014345 23 PYSVEVLPGGELLILDSANSNLYRISSSL 51 (426)
Q Consensus 23 P~GIaVd~dG~LYVaD~~n~rI~kid~dg 51 (426)
-..++..+||.+++++ .+.|+.++..+
T Consensus 19 ~~~~~w~~dg~~~~~~--~~~i~~~~~~~ 45 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ--ENNILVFNAEY 45 (740)
T ss_dssp CCCEEECSSSEEEEEE--TTEEEEEETTT
T ss_pred ccccEECCCCcEEEEc--CCcEEEEECCC
Confidence 4578889999888777 67999999875
No 271
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=65.53 E-value=18 Score=37.32 Aligned_cols=67 Identities=6% Similarity=-0.008 Sum_probs=47.0
Q ss_pred ceEEEcCCCCEEEEECCCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCe
Q 014345 84 KGLTVDDRGNIYIADTMNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRA 160 (426)
Q Consensus 84 ~GIaVd~dG~LYVADt~N~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~r 160 (426)
..|++.++|..+++-...+.|+.++ .+. +.++.|- ....+.|+ +.+++.++++-...+.
T Consensus 359 ~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH-----------------~~~V~sva-~Sp~g~~l~Sgs~Dgt 420 (524)
T 2j04_B 359 VPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSR-----------------ETTITAIG-VSRLHPMVLAGSADGS 420 (524)
T ss_dssp CCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEEC-----------------SSCEEEEE-CCSSCCBCEEEETTTE
T ss_pred cceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecC-----------------CCceEEEE-eCCCCCeEEEEECCCE
Confidence 5799999999888877778899988 333 3555441 11245677 4677877777777888
Q ss_pred EEEEEcCC
Q 014345 161 IREIQLHF 168 (426)
Q Consensus 161 Ir~I~l~~ 168 (426)
|+.+++..
T Consensus 421 v~lwd~~~ 428 (524)
T 2j04_B 421 LIITNAAR 428 (524)
T ss_dssp EECCBSCS
T ss_pred EEEEechH
Confidence 88877643
No 272
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=65.44 E-value=99 Score=31.70 Aligned_cols=69 Identities=9% Similarity=0.020 Sum_probs=38.2
Q ss_pred CceEEEEcCCCcEEEEECC---------CCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCC
Q 014345 22 EPYSVEVLPGGELLILDSA---------NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG 92 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~---------n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG 92 (426)
....++++|||..++.-.. .+.|+.++.++ +....+.... +. -.....+++++||
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~---~~~~~l~~~~----~~---------~~~~~~~~~SPdG 125 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPH---GDPQSLDPPE----VS---------NAKLQYAGWGPKG 125 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSS---CCCEECCCTT----CC---------SCCCSBCCBCSST
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCC---CceEeccCCc----cc---------cccccccEECCCC
Confidence 3788999999984333222 26788888775 2333232110 00 0114556777787
Q ss_pred C-EEEEECCCCEEEEEc
Q 014345 93 N-IYIADTMNMAIRKIS 108 (426)
Q Consensus 93 ~-LYVADt~N~rIrk~d 108 (426)
+ |.++.. +.|++++
T Consensus 126 ~~la~~~~--~~i~~~~ 140 (723)
T 1xfd_A 126 QQLIFIFE--NNIYYCA 140 (723)
T ss_dssp TCEEEEET--TEEEEES
T ss_pred CEEEEEEC--CeEEEEE
Confidence 5 333332 5677777
No 273
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=65.32 E-value=1.2e+02 Score=33.40 Aligned_cols=35 Identities=17% Similarity=0.239 Sum_probs=23.8
Q ss_pred CcceEEEcCCCCEEEEECCCCEEEEEc--CCCcEEEe
Q 014345 82 HPKGLTVDDRGNIYIADTMNMAIRKIS--DSGVTTIA 116 (426)
Q Consensus 82 ~P~GIaVd~dG~LYVADt~N~rIrk~d--~g~VstIa 116 (426)
....++++++|..+++-...+.|+.++ .+.+..+.
T Consensus 380 ~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~ 416 (1045)
T 1k32_A 380 NVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIE 416 (1045)
T ss_dssp SEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEec
Confidence 356899999998554444467899998 44454444
No 274
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=64.56 E-value=22 Score=34.12 Aligned_cols=110 Identities=16% Similarity=0.136 Sum_probs=62.4
Q ss_pred CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC--------CCCEEEEECCCC
Q 014345 31 GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD--------RGNIYIADTMNM 102 (426)
Q Consensus 31 dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~--------dG~LYVADt~N~ 102 (426)
++.++++-...+.|+.++.+...... ..+.+. ..|+. ..-+.|++.+ +|.++++=...+
T Consensus 100 ~~~~las~~~d~~v~lw~~~~~~~~~-~~~~~~---~~gH~---------~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 100 YSLFLACVCQDNTVRLIITKNETIIT-QHVLGG---KSGHH---------NFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp EEEEEEEEETTSCEEEEEEETTEEEE-EEEECT---TTSCS---------SCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred CCCEEEEEeCCCcEEEEECCCCccce-eeeecc---cCCCC---------CceEEEEEccccccccCCCCCEEEEEECCC
Confidence 34455555566777777665321101 112222 22321 1235677765 688888877888
Q ss_pred EEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCc
Q 014345 103 AIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDD 170 (426)
Q Consensus 103 rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~ 170 (426)
.|+.+| .++ +.++.+.. .....+++.+.+.+++++-..++.|+.+++....
T Consensus 167 tv~~Wd~~~~~~~~~~~~~~-----------------~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~ 220 (393)
T 4gq1_A 167 TLIIWRLTDEGPILAGYPLS-----------------SPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNL 220 (393)
T ss_dssp EEEEEEEETTEEEEEEEECS-----------------SCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC
T ss_pred eEEEEECCCCceeeeecCCC-----------------CCcEEEEECCCCCceEEecCCCCEEEEEECCCCc
Confidence 899888 333 33443311 1234677544444667776778999999987543
No 275
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=60.58 E-value=1.2e+02 Score=28.99 Aligned_cols=70 Identities=7% Similarity=0.091 Sum_probs=40.0
Q ss_pred ceEEEcCCCCEEEEECCCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCe
Q 014345 84 KGLTVDDRGNIYIADTMNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRA 160 (426)
Q Consensus 84 ~GIaVd~dG~LYVADt~N~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~r 160 (426)
..++++ ++++++-..++.|+.++ ++. +.++....... .-...+.++ ..+++.++++-..++.
T Consensus 366 ~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~------------~~~~v~~~~-~s~~~~~la~~~~dg~ 430 (445)
T 2ovr_B 366 TCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGG------------SGGVVWRIR-ASNTKLVCAVGSRNGT 430 (445)
T ss_dssp EEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGG------------GTCEEEEEE-ECSSEEEEEEECSSSS
T ss_pred EEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCC------------CCceEEEEE-ecCCEEEEEEcccCCC
Confidence 456664 56666666778899988 444 34442110000 011346677 4677777666655554
Q ss_pred ----EEEEEcCC
Q 014345 161 ----IREIQLHF 168 (426)
Q Consensus 161 ----Ir~I~l~~ 168 (426)
|..++...
T Consensus 431 ~~~~l~v~df~~ 442 (445)
T 2ovr_B 431 EETKLLVLDFDV 442 (445)
T ss_dssp SCCEEEEEECCC
T ss_pred CccEEEEEECCC
Confidence 88887654
No 276
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=60.16 E-value=1e+02 Score=29.39 Aligned_cols=129 Identities=12% Similarity=-0.041 Sum_probs=69.5
Q ss_pred CceEEEEcC--------CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCC-
Q 014345 22 EPYSVEVLP--------GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG- 92 (426)
Q Consensus 22 ~P~GIaVd~--------dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG- 92 (426)
.-+.|++.| ||+++++-...+.|+.+|.... +.+....+.. .....|++.+++
T Consensus 138 ~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~--~~~~~~~~~~----------------~~v~~v~~~p~~~ 199 (393)
T 4gq1_A 138 FVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE--GPILAGYPLS----------------SPGISVQFRPSNP 199 (393)
T ss_dssp CEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT--EEEEEEEECS----------------SCEEEEEEETTEE
T ss_pred ceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC--ceeeeecCCC----------------CCcEEEEECCCCC
Confidence 356788875 7888888888888998886421 2222232210 123578888876
Q ss_pred CEEEEECCCCEEEEEc--CCC-cEEEeCCccCCC-C-------CCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeE
Q 014345 93 NIYIADTMNMAIRKIS--DSG-VTTIAGGKWGRG-G-------GHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAI 161 (426)
Q Consensus 93 ~LYVADt~N~rIrk~d--~g~-VstIaGg~~g~~-~-------G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rI 161 (426)
+++++-..++.|+.+| .+. ............ . ...........-..-..+++...++..+++-...+.|
T Consensus 200 ~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i 279 (393)
T 4gq1_A 200 NQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAW 279 (393)
T ss_dssp EEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEE
T ss_pred ceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCE
Confidence 4566655678899988 222 111111100000 0 0000000111123345666666788888888888899
Q ss_pred EEEEcCC
Q 014345 162 REIQLHF 168 (426)
Q Consensus 162 r~I~l~~ 168 (426)
+.+++..
T Consensus 280 ~vwd~~~ 286 (393)
T 4gq1_A 280 LRWNLFA 286 (393)
T ss_dssp EEEEC--
T ss_pred EEEECcc
Confidence 9888754
No 277
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=59.40 E-value=1e+02 Score=27.84 Aligned_cols=59 Identities=10% Similarity=0.078 Sum_probs=34.6
Q ss_pred CCEEEEECCCCEEEEEc--CCCc-----EEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCC---CeEEEEECCCCeE
Q 014345 92 GNIYIADTMNMAIRKIS--DSGV-----TTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSS---CSLLVIDRGNRAI 161 (426)
Q Consensus 92 G~LYVADt~N~rIrk~d--~g~V-----stIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~---G~LYVaDsgN~rI 161 (426)
+.++++-..++.|+.++ .+.. .++.+- -..-.+|++ .++ +.++++-...+.|
T Consensus 170 ~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H-----------------~~~V~~v~~-sp~~~~~~~las~s~D~~v 231 (297)
T 2pm7_B 170 SRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH-----------------SDWVRDVAW-SPTVLLRSYMASVSQDRTC 231 (297)
T ss_dssp CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC-----------------SSCEEEEEE-CCCCSSSEEEEEEETTSCE
T ss_pred cceEEEEcCCCcEEEEEEcCCCceEEEEEEecCC-----------------CCceEEEEE-CCCCCCceEEEEEECCCcE
Confidence 45666666677788777 3331 122221 012356664 555 4677777777888
Q ss_pred EEEEcCC
Q 014345 162 REIQLHF 168 (426)
Q Consensus 162 r~I~l~~ 168 (426)
+.+++..
T Consensus 232 ~iWd~~~ 238 (297)
T 2pm7_B 232 IIWTQDN 238 (297)
T ss_dssp EEEEESS
T ss_pred EEEEeCC
Confidence 8888764
No 278
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=56.62 E-value=1e+02 Score=31.49 Aligned_cols=116 Identities=11% Similarity=0.009 Sum_probs=68.2
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceE--EEcCCC-CEEEEE
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGL--TVDDRG-NIYIAD 98 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GI--aVd~dG-~LYVAD 98 (426)
...++++.+++ .+++-+.++.|..++..... .....+.+.. + .-.+| ++.++| .++++-
T Consensus 268 ~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~-~~~~~~~~H~--------~--------~V~sv~~~~s~~g~~~laS~ 329 (524)
T 2j04_B 268 LITTFDFLSPT-TVVCGFKNGFVAEFDLTDPE-VPSFYDQVHD--------S--------YILSVSTAYSDFEDTVVSTV 329 (524)
T ss_dssp CEEEEEESSSS-EEEEEETTSEEEEEETTBCS-SCSEEEECSS--------S--------CEEEEEEECCTTSCCEEEEE
T ss_pred CEEEEEecCCC-eEEEEeCCCEEEEEECCCCC-CceEEeeccc--------c--------cEEEEEEEcCCCCCeEEEEe
Confidence 35677777654 55666678899999886321 0112222221 1 12456 345677 788888
Q ss_pred CCCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCce
Q 014345 99 TMNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDC 171 (426)
Q Consensus 99 t~N~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~ 171 (426)
...+.|+.+| ++. +.++.+.... .....|++ .+++..+++-...+.|+.+++....|
T Consensus 330 S~D~tvklWD~~~~~~~~~~~~~~~~---------------~~v~~v~f-sp~~~~l~s~~~d~tv~lwd~~~~~~ 389 (524)
T 2j04_B 330 AVDGYFYIFNPKDIATTKTTVSRFRG---------------SNLVPVVY-CPQIYSYIYSDGASSLRAVPSRAAFA 389 (524)
T ss_dssp ETTSEEEEECGGGHHHHCEEEEECSC---------------CSCCCEEE-ETTTTEEEEECSSSEEEEEETTCTTC
T ss_pred ccCCeEEEEECCCCCccccccccccc---------------CcccceEe-CCCcCeEEEeCCCCcEEEEECccccc
Confidence 8889999999 323 3344331100 01245674 56676777766778888888765443
No 279
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=56.37 E-value=1.1e+02 Score=27.11 Aligned_cols=108 Identities=10% Similarity=0.043 Sum_probs=61.0
Q ss_pred ceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCCC
Q 014345 23 PYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 102 (426)
Q Consensus 23 P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N~ 102 (426)
-.+|++.++|+++++-...+.|..++..... .+..+.+.. ..-.++..++.+.++-....
T Consensus 70 V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~--~~~~~~~h~------------------~~~~~~~~~~~~l~s~~~~~ 129 (318)
T 4ggc_A 70 ISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK--RLRNMTSHS------------------ARVGSLSWNSYILSSGSRSG 129 (318)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTE--EEEEEECCS------------------SCEEEEEEETTEEEEEETTS
T ss_pred EEEEEECCCCCEEEEEECCCcEEEeecCCce--eEEEecCcc------------------ceEEEeecCCCEEEEEecCC
Confidence 4678888888877777777788888776421 122222210 11233444556666666666
Q ss_pred EEEEEc-CCC---cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCC
Q 014345 103 AIRKIS-DSG---VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHF 168 (426)
Q Consensus 103 rIrk~d-~g~---VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~ 168 (426)
.++..+ ... +.++.+. ......++ ...++.++++-...+.|+.+++..
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~-~~~~~~~l~s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 130 HIHHHDVRVAEHHVATLSGH-----------------SQEVCGLR-WAPDGRHLASGGNDNLVNVWPSAP 181 (318)
T ss_dssp EEEEEETTSSSCEEEEEECC-----------------SSCEEEEE-ECTTSSEEEEEETTSCEEEEESSC
T ss_pred ceEeeecCCCceeEEEEcCc-----------------cCceEEEE-EcCCCCEEEEEecCcceeEEECCC
Confidence 666666 222 2333321 11223444 466777777776778888888764
No 280
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=56.18 E-value=95 Score=28.23 Aligned_cols=30 Identities=10% Similarity=0.234 Sum_probs=18.9
Q ss_pred CceEEEEcCCCc-EEEEE-C---CCCeEEEEeCCC
Q 014345 22 EPYSVEVLPGGE-LLILD-S---ANSNLYRISSSL 51 (426)
Q Consensus 22 ~P~GIaVd~dG~-LYVaD-~---~n~rI~kid~dg 51 (426)
....++++|||. |+++. . ...+|+.++.++
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~ 94 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLET 94 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTT
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCC
Confidence 456778888886 44433 2 234588888764
No 281
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=53.95 E-value=1.2e+02 Score=26.78 Aligned_cols=127 Identities=17% Similarity=0.073 Sum_probs=69.7
Q ss_pred CceEEEEcCC--CcEEEEECCCCeEEEEeCCCCc-ccccEEEecCCCCcccccCCcccccccCCcceEEEcCC---CCEE
Q 014345 22 EPYSVEVLPG--GELLILDSANSNLYRISSSLSL-YSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR---GNIY 95 (426)
Q Consensus 22 ~P~GIaVd~d--G~LYVaD~~n~rI~kid~dg~~-~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~d---G~LY 95 (426)
...++++.++ ++++++-..++.|..++..... ........... ... ............+++.++ +.++
T Consensus 112 ~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~p~~~~~~~l 185 (351)
T 3f3f_A 112 SLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMK-VLS-----IPPANHLQSDFCLSWCPSRFSPEKL 185 (351)
T ss_dssp CEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEE-SCS-----CCCSSCSCCCEEEEECCCSSSCCEE
T ss_pred ceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccc-ccc-----cccCCcccceeEEEeccCCCCCcEE
Confidence 5788999998 8877777778899999876322 11111110000 000 000112344567888876 6766
Q ss_pred EEECCCCEEEEEc--CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC----eEEEEECCCCeEEEEEcCCC
Q 014345 96 IADTMNMAIRKIS--DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC----SLLVIDRGNRAIREIQLHFD 169 (426)
Q Consensus 96 VADt~N~rIrk~d--~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G----~LYVaDsgN~rIr~I~l~~~ 169 (426)
++-..++.+.... .+....+.--. ++ -.....|+ +.+++ .++++-...+.|+.+++...
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~h---------~~~i~~~~-~~p~~~~~~~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 186 AVSALEQAIIYQRGKDGKLHVAAKLP-----GH---------KSLIRSIS-WAPSIGRWYQLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp EEEETTEEEEEEECTTSCEEEEEECC-----CC---------CSCEEEEE-ECCCSSCSSEEEEEEETTSCEEEEEEEEC
T ss_pred EEecCCCcEEEEccCCCceeeeeecC-----CC---------CcceeEEE-ECCCCCCcceEEEEEcCCCeEEEEeCCCC
Confidence 6665566665444 23332221100 00 01235666 46666 77777777888988887643
No 282
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=53.49 E-value=25 Score=37.70 Aligned_cols=75 Identities=19% Similarity=0.252 Sum_probs=51.9
Q ss_pred CCceEEEEcCCCc-EEEEECCCCeEEEEeCCCCc---ccc----cEEEecCCCCcccccCCcccccccCCcceEEEcCCC
Q 014345 21 IEPYSVEVLPGGE-LLILDSANSNLYRISSSLSL---YSR----PKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRG 92 (426)
Q Consensus 21 ~~P~GIaVd~dG~-LYVaD~~n~rI~kid~dg~~---~g~----v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG 92 (426)
.+|+|+.++|||. ++++.-....+.+++...-. .+. -.++++... -| -.|.-.++|.+|
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e--~G-----------lGPlHt~Fd~~G 389 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE--LG-----------LGPLHTTFDGRG 389 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB--CC-----------SCEEEEEECSSS
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc--CC-----------CcccEEEECCCC
Confidence 5899999999998 77777777888888765100 000 011122210 01 148889999999
Q ss_pred CEEEEECCCCEEEEEc
Q 014345 93 NIYIADTMNMAIRKIS 108 (426)
Q Consensus 93 ~LYVADt~N~rIrk~d 108 (426)
+.|.+=.-...|.+++
T Consensus 390 ~aYTtlfidSqvvkWn 405 (638)
T 3sbq_A 390 NAYTTLFIDSQVVKWN 405 (638)
T ss_dssp EEEEEETTTTEEEEEE
T ss_pred ceEeeeeecceEEEEe
Confidence 9999988888999987
No 283
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=51.99 E-value=1.2e+02 Score=28.36 Aligned_cols=55 Identities=20% Similarity=0.294 Sum_probs=33.2
Q ss_pred CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCCCEEEEEc
Q 014345 31 GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNMAIRKIS 108 (426)
Q Consensus 31 dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N~rIrk~d 108 (426)
+|.||++. .++.|+.++... |+...... +..+.+++++ ++.||+++. ++.|..++
T Consensus 239 ~~~v~~~~-~~g~l~~~d~~t---G~~~w~~~-----------------~~~~~~~~~~-~~~l~~~~~-~g~l~~~d 293 (376)
T 3q7m_A 239 NGVVFALA-YNGNLTALDLRS---GQIMWKRE-----------------LGSVNDFIVD-GNRIYLVDQ-NDRVMALT 293 (376)
T ss_dssp TTEEEEEC-TTSCEEEEETTT---CCEEEEEC-----------------CCCEEEEEEE-TTEEEEEET-TCCEEEEE
T ss_pred CCEEEEEe-cCcEEEEEECCC---CcEEeecc-----------------CCCCCCceEE-CCEEEEEcC-CCeEEEEE
Confidence 46677765 356777777653 23222211 2223456666 678999986 46788888
No 284
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=51.34 E-value=2.2e+02 Score=30.16 Aligned_cols=76 Identities=13% Similarity=0.288 Sum_probs=47.8
Q ss_pred CceEEEEcC-CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCccccc----------CCcc--------c-ccccC
Q 014345 22 EPYSVEVLP-GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHV----------DGKP--------R-EARMN 81 (426)
Q Consensus 22 ~P~GIaVd~-dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~----------dG~a--------~-~A~Ln 81 (426)
.-+.|..++ +++++|+-... .|++|+.+ |++.+..|...+..+.- +|.+ . +..|.
T Consensus 356 HiNsv~~d~~dd~~liSsR~~-~I~~Id~t----G~V~W~LGg~~~w~~d~~~~~l~Pvd~~G~~~~~~~~~~~~~~~F~ 430 (571)
T 3elq_A 356 HVNSIAYDAKDDSIILSSRHQ-GVVKIGRD----KQVKWILAPSKGWEKPLASKLLKPVDANGKPITCNENGLCENSDFD 430 (571)
T ss_dssp CEEEEEEETTTTEEEEEETTT-EEEEEETT----SCEEEEESCSTTCCTTGGGGBCEEBCTTSCBCCBCTTSCBSSSSCC
T ss_pred EecceeEcCCCCEEEEECCcc-EEEEEcCC----CcEEEEECCCCCCchhhhhhccccccccCcccccccccccccCCCc
Confidence 566788877 55788887766 99999874 67888887654332210 1211 0 12343
Q ss_pred C---cceEEEcCCCCEEEEECCCC
Q 014345 82 H---PKGLTVDDRGNIYIADTMNM 102 (426)
Q Consensus 82 ~---P~GIaVd~dG~LYVADt~N~ 102 (426)
. -+...+-++|+|.+-|-++.
T Consensus 431 ~~~gQH~a~~~~~g~i~vFDNg~~ 454 (571)
T 3elq_A 431 FTYTQHTAWISSKGTLTIFDNGDG 454 (571)
T ss_dssp CCSSCEEEEECTTSCEEEEECCTT
T ss_pred cccCCcCeEEcCCCeEEEEeCCCC
Confidence 3 35666667889999887653
No 285
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=51.21 E-value=1.6e+02 Score=27.59 Aligned_cols=120 Identities=12% Similarity=0.052 Sum_probs=61.3
Q ss_pred CcEEEEEecCCCCCCCceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceE
Q 014345 7 GYTVETVFDGSKLGIEPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGL 86 (426)
Q Consensus 7 G~tv~tv~~g~~l~~~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GI 86 (426)
|.+.+.+.....+...+.+|++..++.+|++.. .+.|++-...|. ....+... .. ....+|
T Consensus 108 G~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~S~DgG~---tW~~~~~~---~~------------~~~~~~ 168 (327)
T 2xbg_A 108 GQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYRTKDSGK---NWQALVQE---AI------------GVMRNL 168 (327)
T ss_dssp TSSCEECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEEESSTTS---SEEEEECS---CC------------CCEEEE
T ss_pred CCCceECccccCCCCCeEEEEEECCCCEEEEeC-CccEEEEcCCCC---CCEEeecC---CC------------cceEEE
Confidence 444444433322222467787777778887763 456766443321 22222211 00 123578
Q ss_pred EEcCCCCEEEEECCCCEEEEEc-C-CC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEE
Q 014345 87 TVDDRGNIYIADTMNMAIRKIS-D-SG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIRE 163 (426)
Q Consensus 87 aVd~dG~LYVADt~N~rIrk~d-~-g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~ 163 (426)
++++++.+|++.... .|.+-+ . +. .+.+.... . .....|+ +++++.+|++.. ++.|++
T Consensus 169 ~~~~~~~~~~~g~~G-~~~~S~d~gG~tW~~~~~~~-~---------------~~~~~~~-~~~~g~~~~~~~-~G~~~~ 229 (327)
T 2xbg_A 169 NRSPSGEYVAVSSRG-SFYSTWEPGQTAWEPHNRTT-S---------------RRLHNMG-FTPDGRLWMIVN-GGKIAF 229 (327)
T ss_dssp EECTTSCEEEEETTS-SEEEEECTTCSSCEEEECCS-S---------------SCEEEEE-ECTTSCEEEEET-TTEEEE
T ss_pred EEcCCCcEEEEECCC-cEEEEeCCCCCceeECCCCC-C---------------CccceeE-ECCCCCEEEEeC-CceEEE
Confidence 888888888776543 444443 3 23 34442210 0 1234566 567788887765 355554
Q ss_pred E
Q 014345 164 I 164 (426)
Q Consensus 164 I 164 (426)
-
T Consensus 230 s 230 (327)
T 2xbg_A 230 S 230 (327)
T ss_dssp E
T ss_pred e
Confidence 3
No 286
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=50.81 E-value=1.5e+02 Score=27.17 Aligned_cols=121 Identities=11% Similarity=0.121 Sum_probs=60.4
Q ss_pred ceEEEEcCCCc-EEEEE--CCCCe--EEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC-CCCEEE
Q 014345 23 PYSVEVLPGGE-LLILD--SANSN--LYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD-RGNIYI 96 (426)
Q Consensus 23 P~GIaVd~dG~-LYVaD--~~n~r--I~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~-dG~LYV 96 (426)
+..+++++||. |+++. ..... |++++..+ +....+... .+ . . +++.+ +|.+++
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~---g~~~~l~~~--------~~------~---~-~~~s~~dg~~l~ 298 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPET---LENEEVMVM--------PP------C---S-HLMSNFDGSLMV 298 (396)
T ss_dssp EEEEEECTTSSCEEEEEEETTTCCEEEEEECTTT---CCEEEEEEC--------CS------E---E-EEEECSSSSEEE
T ss_pred ccceEECCCCCEEEEEecCCCCccceEEEEECCC---CCeEEeeeC--------CC------C---C-CCccCCCCceEE
Confidence 45678899987 55442 23334 88888764 333333211 01 1 1 67777 888776
Q ss_pred EEC----------------CCCEEEEEc-C-CCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCC-eEEEEEC-
Q 014345 97 ADT----------------MNMAIRKIS-D-SGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSC-SLLVIDR- 156 (426)
Q Consensus 97 ADt----------------~N~rIrk~d-~-g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G-~LYVaDs- 156 (426)
+.. ++..|..++ . +....+....... +..++ + .......+++ .++| .|+++..
T Consensus 299 ~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~--~~~~~---~-~~~~~~~~~~-s~dg~~l~~~s~~ 371 (396)
T 3c5m_A 299 GDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSW--DVLDG---D-RQITHPHPSF-TPNDDGVLFTSDF 371 (396)
T ss_dssp EEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCC--CCBTT---B-SSTTCCCCEE-CTTSSEEEEEECT
T ss_pred EecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCcc--ccccc---c-ccCCCCCceE-ccCCCeEEEEecC
Confidence 532 346788888 3 3344444321100 00000 0 0112344553 4555 5655543
Q ss_pred -CCCeEEEEEcCCCce
Q 014345 157 -GNRAIREIQLHFDDC 171 (426)
Q Consensus 157 -gN~rIr~I~l~~~~~ 171 (426)
+...|..+++.+...
T Consensus 372 ~~~~~l~~~~~~~~~~ 387 (396)
T 3c5m_A 372 EGVPAIYIADVPESYK 387 (396)
T ss_dssp TSSCEEEEEECCTTCC
T ss_pred CCCceEEEEEEccccc
Confidence 234677777665433
No 287
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=48.74 E-value=2.1e+02 Score=28.33 Aligned_cols=27 Identities=11% Similarity=-0.036 Sum_probs=21.1
Q ss_pred EEEEcC---CCcEEEEECCCCeEEEEeCCC
Q 014345 25 SVEVLP---GGELLILDSANSNLYRISSSL 51 (426)
Q Consensus 25 GIaVd~---dG~LYVaD~~n~rI~kid~dg 51 (426)
.+++.+ +|+++++-+..+.|..++...
T Consensus 183 ~l~fs~~~g~~~~LaSgS~D~TIkIWDl~T 212 (356)
T 2w18_A 183 ILTFAEVQGMQEALLGTTIMNNIVIWNLKT 212 (356)
T ss_dssp EEEEEEEETSTTEEEEEETTSEEEEEETTT
T ss_pred eEEeeccCCCCceEEEecCCCcEEEEECCC
Confidence 445555 678899888889999999885
No 288
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=48.25 E-value=1.9e+02 Score=27.57 Aligned_cols=67 Identities=16% Similarity=0.227 Sum_probs=36.8
Q ss_pred ceEEEcCCCCEEEEECCCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCe
Q 014345 84 KGLTVDDRGNIYIADTMNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRA 160 (426)
Q Consensus 84 ~GIaVd~dG~LYVADt~N~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~r 160 (426)
..+++ +++.+++-..++.|+.++ .+. +.++.+.. .....+++ ++.++++-..++.
T Consensus 260 ~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-----------------~~v~~~~~---~~~~l~~g~~dg~ 317 (435)
T 1p22_A 260 NVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHK-----------------RGIACLQY---RDRLVVSGSSDNT 317 (435)
T ss_dssp EEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCS-----------------SCEEEEEE---ETTEEEEEETTSC
T ss_pred EEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCC-----------------CcEEEEEe---CCCEEEEEeCCCe
Confidence 34555 456666655678898888 333 34443311 01123332 3455555555677
Q ss_pred EEEEEcCCCceE
Q 014345 161 IREIQLHFDDCA 172 (426)
Q Consensus 161 Ir~I~l~~~~~~ 172 (426)
|+.+++....+.
T Consensus 318 i~iwd~~~~~~~ 329 (435)
T 1p22_A 318 IRLWDIECGACL 329 (435)
T ss_dssp EEEEETTTCCEE
T ss_pred EEEEECCCCCEE
Confidence 888887765543
No 289
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=47.91 E-value=1e+02 Score=31.76 Aligned_cols=71 Identities=10% Similarity=0.142 Sum_probs=42.8
Q ss_pred CceEEEEcCCCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCC-EEEE-EC
Q 014345 22 EPYSVEVLPGGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGN-IYIA-DT 99 (426)
Q Consensus 22 ~P~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~-LYVA-Dt 99 (426)
.+.+++..+||.+++++ .++.|+.++.++ +....+.... .. +. .....+++++||+ |.++ +.
T Consensus 17 ~~~~~~~s~dg~~~~~~-~d~~i~~~~~~~---g~~~~~~~~~---~~--------~~-~~~~~~~~SpDg~~la~~~~~ 80 (719)
T 1z68_A 17 KTFFPNWISGQEYLHQS-ADNNIVLYNIET---GQSYTILSNR---TM--------KS-VNASNYGLSPDRQFVYLESDY 80 (719)
T ss_dssp CCCCCEESSSSEEEEEC-TTSCEEEEESSS---CCEEEEECHH---HH--------HT-TTCSEEEECTTSSEEEEEEEE
T ss_pred CCCccEECCCCeEEEEc-CCCCEEEEEcCC---CcEEEEEccc---cc--------cc-cceeeEEECCCCCeEEEEecC
Confidence 34578899999766555 477899999875 3344443210 00 00 0246789999998 3333 31
Q ss_pred -------CCCEEEEEc
Q 014345 100 -------MNMAIRKIS 108 (426)
Q Consensus 100 -------~N~rIrk~d 108 (426)
....|+.++
T Consensus 81 ~~~~~~s~~~~i~~~d 96 (719)
T 1z68_A 81 SKLWRYSYTATYYIYD 96 (719)
T ss_dssp EECSSSCEEEEEEEEE
T ss_pred ceeEEeecceEEEEEE
Confidence 136788887
No 290
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=41.47 E-value=2.2e+02 Score=29.55 Aligned_cols=80 Identities=6% Similarity=0.012 Sum_probs=42.7
Q ss_pred eEEEEcCCCc-EEEEECC------------CCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcC
Q 014345 24 YSVEVLPGGE-LLILDSA------------NSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD 90 (426)
Q Consensus 24 ~GIaVd~dG~-LYVaD~~------------n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~ 90 (426)
.+++.++||. |+++... ..+|++++..+.. ....++.... ... ..-.++++++
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~-~~~~lv~~~~-~~~------------~~~~~~~~Sp 236 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEP-SKDTVVHERT-GDP------------TTFLQSDLSR 236 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCG-GGCEEEECCC-CCT------------TCEEEEEECT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCc-hhceEEEecC-CCC------------EEEEEEEECC
Confidence 5788999987 5544431 3458888776432 1123333221 000 0124688899
Q ss_pred CCC-EEEE--EC-CCCEEEEEcC--CCcEEEeC
Q 014345 91 RGN-IYIA--DT-MNMAIRKISD--SGVTTIAG 117 (426)
Q Consensus 91 dG~-LYVA--Dt-~N~rIrk~d~--g~VstIaG 117 (426)
||+ |+++ +. .+..|+.++. +.+..+..
T Consensus 237 DG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~ 269 (695)
T 2bkl_A 237 DGKYLFVYILRGWSENDVYWKRPGEKDFRLLVK 269 (695)
T ss_dssp TSCCEEEEEEETTTEEEEEEECTTCSSCEEEEE
T ss_pred CCCEEEEEEeCCCCceEEEEEcCCCCceEEeec
Confidence 987 3332 22 3457888872 34555554
No 291
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=41.15 E-value=1.9e+02 Score=25.46 Aligned_cols=66 Identities=15% Similarity=0.101 Sum_probs=43.6
Q ss_pred eEEEEcCCCcEEEEECCCCeEEEEeCCCCccccc-EEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECCCC
Q 014345 24 YSVEVLPGGELLILDSANSNLYRISSSLSLYSRP-KLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTMNM 102 (426)
Q Consensus 24 ~GIaVd~dG~LYVaD~~n~rI~kid~dg~~~g~v-~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~N~ 102 (426)
+.|+.+++|-|-|+ ..+.|+.++.+. ++. .++.+.. . -..-..|++.++|+++++-..++
T Consensus 29 ~~l~WS~~~~lAvg--~D~tV~iWd~~t---g~~~~~~~~~~--~------------~~~V~~v~~~~~~~~l~sgs~Dg 89 (318)
T 4ggc_A 29 NLVDWSSGNVLAVA--LDNSVYLWSASS---GDILQLLQMEQ--P------------GEYISSVAWIKEGNYLAVGTSSA 89 (318)
T ss_dssp BCEEECTTSEEEEE--ETTEEEEEETTT---CCEEEEEECCS--T------------TCCEEEEEECTTSSEEEEEETTS
T ss_pred eEEEECCCCEEEEE--eCCEEEEEECCC---CCEEEEEEecC--C------------CCeEEEEEECCCCCEEEEEECCC
Confidence 56888877634343 367899998874 333 3332221 0 01136799999999888888889
Q ss_pred EEEEEc
Q 014345 103 AIRKIS 108 (426)
Q Consensus 103 rIrk~d 108 (426)
.|+.++
T Consensus 90 ~v~iw~ 95 (318)
T 4ggc_A 90 EVQLWD 95 (318)
T ss_dssp EEEEEE
T ss_pred cEEEee
Confidence 999998
No 292
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=41.10 E-value=58 Score=32.16 Aligned_cols=72 Identities=7% Similarity=0.009 Sum_probs=49.6
Q ss_pred CceEEEEcCC-CcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEEEECC
Q 014345 22 EPYSVEVLPG-GELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYIADTM 100 (426)
Q Consensus 22 ~P~GIaVd~d-G~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYVADt~ 100 (426)
...+|++.++ ++++++-...+.|..+|..... .+....+. -.....|+++++|+.+++-..
T Consensus 151 ~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~--~~~~~~~~----------------~~~v~~v~wspdg~~lasgs~ 212 (434)
T 2oit_A 151 MVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV--KVCATLPS----------------TVAVTSVCWSPKGKQLAVGKQ 212 (434)
T ss_dssp SEEEEEECSSCTTEEEEEETTSCEEEEEESSSE--EEEEEECG----------------GGCEEEEEECTTSSCEEEEET
T ss_pred ceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc--ceeeccCC----------------CCceeEEEEcCCCCEEEEEcC
Confidence 4789999996 7888877788899999886321 11111111 113678999999986666667
Q ss_pred CCEEEEEc-CCC
Q 014345 101 NMAIRKIS-DSG 111 (426)
Q Consensus 101 N~rIrk~d-~g~ 111 (426)
++.|+.++ .+.
T Consensus 213 dg~v~iwd~~~~ 224 (434)
T 2oit_A 213 NGTVVQYLPTLQ 224 (434)
T ss_dssp TSCEEEECTTCC
T ss_pred CCcEEEEccCCc
Confidence 88999999 533
No 293
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=40.88 E-value=2.1e+02 Score=26.09 Aligned_cols=29 Identities=24% Similarity=0.263 Sum_probs=19.9
Q ss_pred ceEEEEcCCCc-E-EEEEC-CCCeEEEEeCCC
Q 014345 23 PYSVEVLPGGE-L-LILDS-ANSNLYRISSSL 51 (426)
Q Consensus 23 P~GIaVd~dG~-L-YVaD~-~n~rI~kid~dg 51 (426)
+..+++++||. | |+.+. +...|+.++.++
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~ 69 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLET 69 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTT
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCC
Confidence 56678999997 3 34443 345788888875
No 294
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=40.32 E-value=3.5e+02 Score=28.36 Aligned_cols=16 Identities=25% Similarity=0.401 Sum_probs=10.5
Q ss_pred CCCCEEEEECCCCEEE
Q 014345 90 DRGNIYIADTMNMAIR 105 (426)
Q Consensus 90 ~dG~LYVADt~N~rIr 105 (426)
.+|.||+.|..++.+.
T Consensus 322 ~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 322 KNGFFYVLDRTNGKLI 337 (668)
T ss_dssp TTSEEEEEETTTCCEE
T ss_pred CCCEEEEEECCCCCEe
Confidence 4667777777666554
No 295
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=40.04 E-value=34 Score=36.09 Aligned_cols=28 Identities=11% Similarity=0.230 Sum_probs=16.6
Q ss_pred eEEEEcCCCcEEEEECCC---------CeEEEEeCCC
Q 014345 24 YSVEVLPGGELLILDSAN---------SNLYRISSSL 51 (426)
Q Consensus 24 ~GIaVd~dG~LYVaD~~n---------~rI~kid~dg 51 (426)
.+++++|||..++..... +.|+.++..+
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~ 101 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNK 101 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCC
Confidence 457889999843332221 4566777764
No 296
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=39.39 E-value=52 Score=35.36 Aligned_cols=83 Identities=10% Similarity=0.078 Sum_probs=52.8
Q ss_pred CCcceEEEcCCCC-EEEEECCCCEEEEEcCCCcE-EEeCCccCCCCCCCCCCcccccC-CCCCeeEEECCCCeEEEEECC
Q 014345 81 NHPKGLTVDDRGN-IYIADTMNMAIRKISDSGVT-TIAGGKWGRGGGHVDGPSEDAKF-SNDFDVVYIGSSCSLLVIDRG 157 (426)
Q Consensus 81 n~P~GIaVd~dG~-LYVADt~N~rIrk~d~g~Vs-tIaGg~~g~~~G~~dG~~~~a~f-~~P~gIa~vd~~G~LYVaDsg 157 (426)
++|+|+-+++||. ++|+......+-+++-..+. .+++... ...+-...+..+ ..|...+ .|.+|+.|.+=.-
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~----~~~~~~~ae~e~GlGPlHt~-Fd~~G~aYTtlfi 397 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLA----DPRDVIVGEPELGLGPLHTT-FDGRGNAYTTLFI 397 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCS----CGGGGEEECCBCCSCEEEEE-ECSSSEEEEEETT
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhcccc----CcccceEeeccCCCcccEEE-ECCCCceEeeeee
Confidence 7899999999997 77777778888888732211 1111000 000000000001 3689999 5889999999988
Q ss_pred CCeEEEEEcCC
Q 014345 158 NRAIREIQLHF 168 (426)
Q Consensus 158 N~rIr~I~l~~ 168 (426)
...|.+++++.
T Consensus 398 dSqvvkWni~~ 408 (638)
T 3sbq_A 398 DSQVVKWNMEE 408 (638)
T ss_dssp TTEEEEEEHHH
T ss_pred cceEEEEeccH
Confidence 88999988753
No 297
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=38.32 E-value=2.6e+02 Score=29.31 Aligned_cols=26 Identities=0% Similarity=-0.083 Sum_probs=14.6
Q ss_pred ECCCCeEEEEECCCCeEEEEEcCCCce
Q 014345 145 IGSSCSLLVIDRGNRAIREIQLHFDDC 171 (426)
Q Consensus 145 vd~~G~LYVaDsgN~rIr~I~l~~~~~ 171 (426)
+...+.||+.+ .++.|+.++......
T Consensus 466 ~t~gg~vf~g~-~dg~l~a~d~~tG~~ 491 (668)
T 1kv9_A 466 STAGNLVFQGT-AAGQMHAYSADKGEA 491 (668)
T ss_dssp EETTTEEEEEC-TTSEEEEEETTTCCE
T ss_pred EeCCCEEEEEC-CcccchhhhhhcChh
Confidence 33455666663 456677776654433
No 298
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=37.44 E-value=1.5e+02 Score=23.56 Aligned_cols=24 Identities=13% Similarity=0.201 Sum_probs=18.3
Q ss_pred cceEEEcCCCCEEEEECCCCEEEE
Q 014345 83 PKGLTVDDRGNIYIADTMNMAIRK 106 (426)
Q Consensus 83 P~GIaVd~dG~LYVADt~N~rIrk 106 (426)
+.-+.+..+|+|.+.|..+..|+.
T Consensus 52 ~~~L~l~~dGnLvL~d~~~~~vWs 75 (105)
T 4h3o_A 52 GCSAVLQSDGNFVVYDSSGRSLWA 75 (105)
T ss_dssp SCEEEECTTSCEEEECTTCCEEEE
T ss_pred cEEEEEeCCccEEEECCCcEEEEE
Confidence 456889999999999986655543
No 299
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=36.38 E-value=2.8e+02 Score=26.23 Aligned_cols=68 Identities=10% Similarity=0.233 Sum_probs=36.1
Q ss_pred eEEEcCCCCEEEEECCCCEEEEEc--CCC-cEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeE
Q 014345 85 GLTVDDRGNIYIADTMNMAIRKIS--DSG-VTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAI 161 (426)
Q Consensus 85 GIaVd~dG~LYVADt~N~rIrk~d--~g~-VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rI 161 (426)
.+++ +++++++-..++.|+.++ .+. +.++.+.... -.....+++ ++.++++-..++.|
T Consensus 324 ~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~--------------~~~v~~~~~---~~~~l~s~~~dg~v 384 (445)
T 2ovr_B 324 GMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKH--------------QSAVTCLQF---NKNFVITSSDDGTV 384 (445)
T ss_dssp EEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSC--------------SSCEEEEEE---CSSEEEEEETTSEE
T ss_pred EEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCC--------------CCCEEEEEE---CCCEEEEEeCCCeE
Confidence 4444 456666666678888888 344 3444331100 011234442 24555555566777
Q ss_pred EEEEcCCCce
Q 014345 162 REIQLHFDDC 171 (426)
Q Consensus 162 r~I~l~~~~~ 171 (426)
+.+++.....
T Consensus 385 ~iwd~~~~~~ 394 (445)
T 2ovr_B 385 KLWDLKTGEF 394 (445)
T ss_dssp EEEETTTCCE
T ss_pred EEEECCCCce
Confidence 7777765443
No 300
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=36.00 E-value=1.2e+02 Score=27.76 Aligned_cols=70 Identities=14% Similarity=0.113 Sum_probs=41.9
Q ss_pred ceEEEEcC--CCcEEEEECCCCeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEcCC--CCEEEEE
Q 014345 23 PYSVEVLP--GGELLILDSANSNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDR--GNIYIAD 98 (426)
Q Consensus 23 P~GIaVd~--dG~LYVaD~~n~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~d--G~LYVAD 98 (426)
-.+|++.+ +|+++++-...+.|..++...........+.|. -..-+.|++.++ |.++++-
T Consensus 60 V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h----------------~~~V~~v~~~p~~~g~~lasg 123 (316)
T 3bg1_A 60 VWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGH----------------DSSVNSVCWAPHDYGLILACG 123 (316)
T ss_dssp EEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCC----------------SSCCCEEEECCTTTCSCEEEE
T ss_pred EEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCC----------------CCceEEEEECCCCCCcEEEEE
Confidence 45677754 467666666677788887753210111222111 112467888876 7777777
Q ss_pred CCCCEEEEEc
Q 014345 99 TMNMAIRKIS 108 (426)
Q Consensus 99 t~N~rIrk~d 108 (426)
..++.|+.++
T Consensus 124 s~D~~i~lwd 133 (316)
T 3bg1_A 124 SSDGAISLLT 133 (316)
T ss_dssp CSSSCEEEEE
T ss_pred cCCCCEEEEe
Confidence 7778888877
No 301
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=34.40 E-value=1.2e+02 Score=31.34 Aligned_cols=62 Identities=10% Similarity=0.012 Sum_probs=37.3
Q ss_pred ceEEEEcCCCcE-EEEEC--------CCCeEEEEeCCCCccccc---EEEecCCCCcccccCCcccccccCCcceEEEcC
Q 014345 23 PYSVEVLPGGEL-LILDS--------ANSNLYRISSSLSLYSRP---KLVAGSAEGYSGHVDGKPREARMNHPKGLTVDD 90 (426)
Q Consensus 23 P~GIaVd~dG~L-YVaD~--------~n~rI~kid~dg~~~g~v---~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~ 90 (426)
...++++|||+. +++.. ..+.|+.++.+++ +. ..+. .....+++.+
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g---~~~~~~~l~-------------------~~~~~~~~SP 119 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNG---EFVRGNELP-------------------RPIQYLCWSP 119 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT---EECCSSCCC-------------------SSBCCEEECS
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCC---ccccceecC-------------------cccccceECC
Confidence 568899999983 33321 1367888887642 21 1110 1245688889
Q ss_pred CCC-EEEEECCCCEEEEEc
Q 014345 91 RGN-IYIADTMNMAIRKIS 108 (426)
Q Consensus 91 dG~-LYVADt~N~rIrk~d 108 (426)
||+ |.++. ++.|+.++
T Consensus 120 DG~~la~~~--~~~i~~~~ 136 (719)
T 1z68_A 120 VGSKLAYVY--QNNIYLKQ 136 (719)
T ss_dssp STTCEEEEE--TTEEEEES
T ss_pred CCCEEEEEE--CCeEEEEe
Confidence 886 44443 46788888
No 302
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=33.72 E-value=4.2e+02 Score=27.35 Aligned_cols=122 Identities=11% Similarity=0.027 Sum_probs=68.3
Q ss_pred CceEEEEcC-CCcEEEEECCC-----------CeEEEEeCCCCcccccEEEecCCCCcccccCCcccccccCCcceEEEc
Q 014345 22 EPYSVEVLP-GGELLILDSAN-----------SNLYRISSSLSLYSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVD 89 (426)
Q Consensus 22 ~P~GIaVd~-dG~LYVaD~~n-----------~rI~kid~dg~~~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd 89 (426)
.+..+++.+ +|.|||.-... ..+.++|+.... ...+...+ ..+-.+-.++++.
T Consensus 187 ~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~---w~~~~~~~------------~~~~~~~~~~~~~ 251 (656)
T 1k3i_A 187 VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI---VSDRTVTV------------TKHDMFCPGISMD 251 (656)
T ss_dssp CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCC---BCCCEEEE------------CSCCCSSCEEEEC
T ss_pred CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCc---EEeCcccC------------CCCCCccccccCC
Confidence 467888887 88999974211 257778876422 11111000 0011123467877
Q ss_pred CCCCEEEEECC-CCEEEEEc--CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEEC-C-----CCe
Q 014345 90 DRGNIYIADTM-NMAIRKIS--DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDR-G-----NRA 160 (426)
Q Consensus 90 ~dG~LYVADt~-N~rIrk~d--~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDs-g-----N~r 160 (426)
.+|.|||.-.. ...++++| .+....+..-...+ .-+.++ +-++|.|||.-- . ...
T Consensus 252 ~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R---------------~~~s~~-~~~dg~iyv~GG~~~~~~~~~~ 315 (656)
T 1k3i_A 252 GNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVAR---------------GYQSSA-TMSDGRVFTIGGSWSGGVFEKN 315 (656)
T ss_dssp TTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCC---------------SSCEEE-ECTTSCEEEECCCCCSSSCCCC
T ss_pred CCCCEEEeCCCCCCceEEecCcCCceeECCCCCccc---------------cccceE-EecCCeEEEEeCcccCCccccc
Confidence 88999999653 34688888 34444443211111 112333 334788999764 1 256
Q ss_pred EEEEEcCCCceEee
Q 014345 161 IREIQLHFDDCAYQ 174 (426)
Q Consensus 161 Ir~I~l~~~~~~~~ 174 (426)
+.++++........
T Consensus 316 ~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 316 GEVYSPSSKTWTSL 329 (656)
T ss_dssp EEEEETTTTEEEEE
T ss_pred ceEeCCCCCcceeC
Confidence 88899887666553
No 303
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=32.83 E-value=1.5e+02 Score=23.58 Aligned_cols=22 Identities=23% Similarity=0.308 Sum_probs=15.9
Q ss_pred ceEEEcCCCCEEEEECCCCEEE
Q 014345 84 KGLTVDDRGNIYIADTMNMAIR 105 (426)
Q Consensus 84 ~GIaVd~dG~LYVADt~N~rIr 105 (426)
.-+.+..+|+|++-|..+..|+
T Consensus 52 ~~l~l~~dGNLvl~~~~~~~~W 73 (109)
T 3dzw_A 52 CHLSMQSDGNLVVYSPRNNPIW 73 (109)
T ss_dssp CEEEECTTSCEEEECTTSCEEE
T ss_pred EEEEEeCCCCEEEECCCCCEEE
Confidence 3478888999999987544444
No 304
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=32.76 E-value=1.5e+02 Score=23.88 Aligned_cols=18 Identities=17% Similarity=0.176 Sum_probs=14.0
Q ss_pred eEEEcCCCCEEEEECCCC
Q 014345 85 GLTVDDRGNIYIADTMNM 102 (426)
Q Consensus 85 GIaVd~dG~LYVADt~N~ 102 (426)
-+.+..+|+|++.|..+.
T Consensus 60 ~l~l~~dGNLVl~d~~~~ 77 (113)
T 3mez_B 60 FMRLGHSGELDITDDRLN 77 (113)
T ss_dssp EEEECTTSCEEEECTTSC
T ss_pred EEEEeCCCcEEEECCCCC
Confidence 478888999999986443
No 305
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=30.93 E-value=2.6e+02 Score=25.15 Aligned_cols=26 Identities=12% Similarity=0.031 Sum_probs=15.1
Q ss_pred cceEEEcCCCC-EEE-EEC---CCCEEEEEc
Q 014345 83 PKGLTVDDRGN-IYI-ADT---MNMAIRKIS 108 (426)
Q Consensus 83 P~GIaVd~dG~-LYV-ADt---~N~rIrk~d 108 (426)
...+++.+||+ |++ ++. ....|+.++
T Consensus 61 ~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~ 91 (347)
T 2gop_A 61 ATMPRISPDGKKIAFMRANEEKKVSEIWVAD 91 (347)
T ss_dssp CEEEEECTTSSEEEEEEEETTTTEEEEEEEE
T ss_pred CCCeEECCCCCEEEEEEeccCCCcceEEEEE
Confidence 45678888886 333 332 234577777
No 306
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=30.14 E-value=2.1e+02 Score=22.75 Aligned_cols=14 Identities=36% Similarity=0.494 Sum_probs=8.7
Q ss_pred eEEEcCCCCEEEEE
Q 014345 85 GLTVDDRGNIYIAD 98 (426)
Q Consensus 85 GIaVd~dG~LYVAD 98 (426)
-+.+.++|+|.+-|
T Consensus 86 ~l~L~ddGNlVly~ 99 (105)
T 4h3o_A 86 ILILQDDGNVIIYG 99 (105)
T ss_dssp EEEECTTSCEEEEE
T ss_pred EEEEeCCCeEEEEC
Confidence 35566677766655
No 307
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=26.86 E-value=5.7e+02 Score=26.76 Aligned_cols=27 Identities=0% Similarity=-0.101 Sum_probs=15.9
Q ss_pred ECCCCeEEEEECCCCeEEEEEcCCCceE
Q 014345 145 IGSSCSLLVIDRGNRAIREIQLHFDDCA 172 (426)
Q Consensus 145 vd~~G~LYVaDsgN~rIr~I~l~~~~~~ 172 (426)
....+.||+. +..+.|+.|+.....+.
T Consensus 485 ~~~g~~v~~g-~~dg~l~a~D~~tG~~l 511 (677)
T 1kb0_A 485 TTAGNVVFQG-TADGRLVAYHAATGEKL 511 (677)
T ss_dssp EETTTEEEEE-CTTSEEEEEETTTCCEE
T ss_pred EeCCCEEEEE-CCCCcEEEEECCCCcee
Confidence 3445566665 44667777776655443
No 308
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=26.57 E-value=5.4e+02 Score=26.46 Aligned_cols=25 Identities=12% Similarity=0.169 Sum_probs=16.8
Q ss_pred ceEEEcCCCC-EEE-EECC---CCEEEEEc
Q 014345 84 KGLTVDDRGN-IYI-ADTM---NMAIRKIS 108 (426)
Q Consensus 84 ~GIaVd~dG~-LYV-ADt~---N~rIrk~d 108 (426)
.++++++||+ |++ +... +..|+.++
T Consensus 236 ~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d 265 (710)
T 2xdw_A 236 GGAELSDDGRYVLLSIREGCDPVNRLWYCD 265 (710)
T ss_dssp EEEEECTTSCEEEEEEECSSSSCCEEEEEE
T ss_pred EEEEEcCCCCEEEEEEEccCCCccEEEEEE
Confidence 4788999987 333 3322 56888888
No 309
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=26.38 E-value=3.9e+02 Score=24.67 Aligned_cols=38 Identities=8% Similarity=0.052 Sum_probs=22.4
Q ss_pred CCeEEEEECCCCeEEEEEcCCCceEeecCCCCcceEEEE
Q 014345 148 SCSLLVIDRGNRAIREIQLHFDDCAYQYGSSFPLGIAVL 186 (426)
Q Consensus 148 ~G~LYVaDsgN~rIr~I~l~~~~~~~~~~~g~P~GIAv~ 186 (426)
++.||++.. ++.|..+++...........+...++++.
T Consensus 239 ~~~v~~~~~-~g~l~~~d~~tG~~~w~~~~~~~~~~~~~ 276 (376)
T 3q7m_A 239 NGVVFALAY-NGNLTALDLRSGQIMWKRELGSVNDFIVD 276 (376)
T ss_dssp TTEEEEECT-TSCEEEEETTTCCEEEEECCCCEEEEEEE
T ss_pred CCEEEEEec-CcEEEEEECCCCcEEeeccCCCCCCceEE
Confidence 478888764 56788888865554443333333444443
No 310
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=24.82 E-value=4e+02 Score=26.27 Aligned_cols=128 Identities=13% Similarity=0.057 Sum_probs=0.0
Q ss_pred EEEcCCCcEEEEECCCCeEEEEeCCCCc---------ccccEEEecCCCCcccccCCcccccccCCcceEEEcCCCCEEE
Q 014345 26 VEVLPGGELLILDSANSNLYRISSSLSL---------YSRPKLVAGSAEGYSGHVDGKPREARMNHPKGLTVDDRGNIYI 96 (426)
Q Consensus 26 IaVd~dG~LYVaD~~n~rI~kid~dg~~---------~g~v~~vaG~~~G~~G~~dG~a~~A~Ln~P~GIaVd~dG~LYV 96 (426)
+++++...++++-..++-+. ++.+.-. ......+. +..+..|++ ....|+|
T Consensus 43 Lais~~~gll~a~~~~~l~v-~~~~~l~~~~~~~~~~~~~~~~~~------------------lp~V~~l~f-d~~~L~v 102 (388)
T 1xip_A 43 LDISNSKSLFVAASGSKAVV-GELQLLRDHITSDSTPLTFKWEKE------------------IPDVIFVCF-HGDQVLV 102 (388)
T ss_dssp EEEETTTTEEEEEETTEEEE-EEHHHHHHHHHSSSCCCCCSEEEE------------------CTTEEEEEE-ETTEEEE
T ss_pred EEEcCCCCEEEEeCCCEEEE-EEhhHhhhhhccccccccceEEee------------------CCCeeEEEE-CCCEEEE
Q ss_pred EECCCCEEEEEc---CCCcEEEeCCccCCCCCCCCCCcccccCCCCCeeEEECCCCeEEEEECCCCeEEEEEcCCCceEe
Q 014345 97 ADTMNMAIRKIS---DSGVTTIAGGKWGRGGGHVDGPSEDAKFSNDFDVVYIGSSCSLLVIDRGNRAIREIQLHFDDCAY 173 (426)
Q Consensus 97 ADt~N~rIrk~d---~g~VstIaGg~~g~~~G~~dG~~~~a~f~~P~gIa~vd~~G~LYVaDsgN~rIr~I~l~~~~~~~ 173 (426)
+ .++.|++++ -....++..-.... ...++..|. ++.+..+|.|++.|-.++....+... .
T Consensus 103 ~--~~~~l~v~dv~sl~~~~~~~~~~~~v---------~~i~~~~p~-~av~~~dG~L~v~dl~~~~~~~~~~~-----V 165 (388)
T 1xip_A 103 S--TRNALYSLDLEELSEFRTVTSFEKPV---------FQLKNVNNT-LVILNSVNDLSALDLRTKSTKQLAQN-----V 165 (388)
T ss_dssp E--ESSEEEEEESSSTTCEEEEEECSSCE---------EEEEECSSE-EEEEETTSEEEEEETTTCCEEEEEES-----E
T ss_pred E--cCCcEEEEEchhhhccCccceeecce---------eeEEecCCC-EEEEECCCCEEEEEccCCccccccCC-----c
Q ss_pred ecCCCCcceEEEEecCC
Q 014345 174 QYGSSFPLGIAVLLAAG 190 (426)
Q Consensus 174 ~~~~g~P~GIAv~~g~g 190 (426)
....-.|.|+++..+.+
T Consensus 166 s~v~WSpkG~~vg~~dg 182 (388)
T 1xip_A 166 TSFDVTNSQLAVLLKDR 182 (388)
T ss_dssp EEEEECSSEEEEEETTS
T ss_pred eEEEEcCCceEEEEcCC
No 311
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=23.43 E-value=6.2e+02 Score=26.02 Aligned_cols=29 Identities=14% Similarity=0.043 Sum_probs=19.9
Q ss_pred ceEEEEcCCCcE--EEEECCCC---eEEEEeCCC
Q 014345 23 PYSVEVLPGGEL--LILDSANS---NLYRISSSL 51 (426)
Q Consensus 23 P~GIaVd~dG~L--YVaD~~n~---rI~kid~dg 51 (426)
-.+++++|||.. |.++...+ .|+.++.++
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 357889999983 44443332 799999875
No 312
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=21.80 E-value=1.2e+02 Score=24.44 Aligned_cols=18 Identities=22% Similarity=0.394 Sum_probs=13.9
Q ss_pred ceEEEcCCCCEEEEECCC
Q 014345 84 KGLTVDDRGNIYIADTMN 101 (426)
Q Consensus 84 ~GIaVd~dG~LYVADt~N 101 (426)
.-+.+..+|+|++-|..+
T Consensus 52 ~~l~l~~dGNLVl~~~~~ 69 (111)
T 3mez_A 52 CTLRLNNRGQLEIHSANS 69 (111)
T ss_dssp CEEEECTTSCEEEECSSC
T ss_pred EEEEEcCCCcEEEEeCCC
Confidence 457788899999988643
No 313
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=20.56 E-value=6.3e+02 Score=26.61 Aligned_cols=80 Identities=19% Similarity=0.258 Sum_probs=49.7
Q ss_pred ccCCcceEEEcCC-CCEEEEECCCCEEEEEc-CCCcEEEeCCccCCCCCCCC---------CCc--------c-cccCCC
Q 014345 79 RMNHPKGLTVDDR-GNIYIADTMNMAIRKIS-DSGVTTIAGGKWGRGGGHVD---------GPS--------E-DAKFSN 138 (426)
Q Consensus 79 ~Ln~P~GIaVd~d-G~LYVADt~N~rIrk~d-~g~VstIaGg~~g~~~G~~d---------G~~--------~-~a~f~~ 138 (426)
..-|-+.|..|+. ++|+|+-+.. .|.+|+ ++.|.=+.|+..+......+ |.. . +..|.+
T Consensus 353 Dw~HiNsv~~d~~dd~~liSsR~~-~I~~Id~tG~V~W~LGg~~~w~~d~~~~~l~Pvd~~G~~~~~~~~~~~~~~~F~~ 431 (571)
T 3elq_A 353 NWAHVNSIAYDAKDDSIILSSRHQ-GVVKIGRDKQVKWILAPSKGWEKPLASKLLKPVDANGKPITCNENGLCENSDFDF 431 (571)
T ss_dssp CSCCEEEEEEETTTTEEEEEETTT-EEEEEETTSCEEEEESCSTTCCTTGGGGBCEEBCTTSCBCCBCTTSCBSSSSCCC
T ss_pred CCcEecceeEcCCCCEEEEECCcc-EEEEEcCCCcEEEEECCCCCCchhhhhhccccccccCcccccccccccccCCCcc
Confidence 4567789999984 4677777766 999999 77787777765443111111 110 0 134443
Q ss_pred ---CCeeEEECCCCeEEEEECCCCe
Q 014345 139 ---DFDVVYIGSSCSLLVIDRGNRA 160 (426)
Q Consensus 139 ---P~gIa~vd~~G~LYVaDsgN~r 160 (426)
-++..++ +++.|.|.|-++.+
T Consensus 432 ~~gQH~a~~~-~~g~i~vFDNg~~~ 455 (571)
T 3elq_A 432 TYTQHTAWIS-SKGTLTIFDNGDGR 455 (571)
T ss_dssp CSSCEEEEEC-TTSCEEEEECCTTG
T ss_pred ccCCcCeEEc-CCCeEEEEeCCCCC
Confidence 4566544 67999999976543
No 314
>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}
Probab=20.56 E-value=2.1e+02 Score=22.92 Aligned_cols=21 Identities=24% Similarity=0.286 Sum_probs=15.3
Q ss_pred ceEEEcCCCCEEEEECCCCEE
Q 014345 84 KGLTVDDRGNIYIADTMNMAI 104 (426)
Q Consensus 84 ~GIaVd~dG~LYVADt~N~rI 104 (426)
.-+.+..+|+|++.|..+..|
T Consensus 56 ~~l~l~~dGNLvl~d~~~~~i 76 (110)
T 3r0e_B 56 CFLRLNHKGELIIKDDDFKTI 76 (110)
T ss_dssp CEEEECTTSCEEEECTTCCEE
T ss_pred EEEEEeCCCcEEEEeCCCCEE
Confidence 347888899999998754333
No 315
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=20.41 E-value=3.2e+02 Score=21.62 Aligned_cols=22 Identities=36% Similarity=0.444 Sum_probs=15.4
Q ss_pred ceEEEcCCCCEEEEECCCCEEE
Q 014345 84 KGLTVDDRGNIYIADTMNMAIR 105 (426)
Q Consensus 84 ~GIaVd~dG~LYVADt~N~rIr 105 (426)
.-+.+..+|+|.+-|..+..|+
T Consensus 53 ~~l~l~~dGNLVl~~~~~~~~W 74 (110)
T 3a0c_A 53 CRLTLHNNGNLVIYDQSNRVIW 74 (110)
T ss_dssp CEEEECTTSCEEEECTTCCEEE
T ss_pred EEEEEeCCCCEEEECCCCcEEE
Confidence 3477788999999886544443
No 316
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=20.23 E-value=6.2e+02 Score=24.85 Aligned_cols=71 Identities=13% Similarity=0.123 Sum_probs=46.5
Q ss_pred cCCCc--EEEEECCCC--eEEEEeCCCCcccccE-EEecCCCCcccccCCcccccccCCcc-eEEEcCCCCEEEEECCCC
Q 014345 29 LPGGE--LLILDSANS--NLYRISSSLSLYSRPK-LVAGSAEGYSGHVDGKPREARMNHPK-GLTVDDRGNIYIADTMNM 102 (426)
Q Consensus 29 d~dG~--LYVaD~~n~--rI~kid~dg~~~g~v~-~vaG~~~G~~G~~dG~a~~A~Ln~P~-GIaVd~dG~LYVADt~N~ 102 (426)
+.+|. ||..+...+ .|..+|.+.. ++. .+.=...|..| ...+. ++-+.....|||.+....
T Consensus 35 ~~~~k~yL~~~N~~~~~~~i~~iDL~~~---kl~k~i~~ekEGPNg----------i~~~~~~~~i~~~DsI~i~~~~~~ 101 (369)
T 3s9j_A 35 EENGKEYLHFENTQKSLYDIVIFDIENQ---QIAKRIPLHKTGPNG----------LPAVFGSRPSPDSQYILVAQNNIS 101 (369)
T ss_dssp EETTEEEEEEEECSTTCCEEEEEETTTT---EEEEEEECBSSSTTB----------CTTCCCEEESSSTTSEEEEEGGGT
T ss_pred ecCCcEEEEEeCCCCCcCcEEEEECCCC---ceeeeeccccCCCCC----------cccceeeEEecCCCEEEEEeCCcc
Confidence 35664 777888778 9999999842 221 11101122222 33464 577777889999998888
Q ss_pred EEEEEc-CCCc
Q 014345 103 AIRKIS-DSGV 112 (426)
Q Consensus 103 rIrk~d-~g~V 112 (426)
+|..++ .|.+
T Consensus 102 ~i~l~n~~G~~ 112 (369)
T 3s9j_A 102 RLSSINSQGEI 112 (369)
T ss_dssp EEEEECTTCCE
T ss_pred eEEEECCCceE
Confidence 999999 6664
No 317
>2q58_A Fragment, farnesyl pyrophosphate synthase; farnesyl diphosphate synthase, structural genomics, structur genomics consortium, SGC; HET: ZOL; 2.37A {Cryptosporidium parvum} PDB: 2o1o_A*
Probab=20.03 E-value=24 Score=35.11 Aligned_cols=20 Identities=35% Similarity=0.441 Sum_probs=0.8
Q ss_pred hccccccCCCCccccccccc
Q 014345 358 HHHRYQSSTPNTYYEQSSEK 377 (426)
Q Consensus 358 ~~~r~~~~~~~~~~~~~~e~ 377 (426)
|||-|+||++.+.|.|++..
T Consensus 5 ~~~~~~~s~~~~~~~~~~~~ 24 (368)
T 2q58_A 5 HHHHHHSSGRENLYFQGEYD 24 (368)
T ss_dssp ------------------CC
T ss_pred cccccccCCcccccccccch
Confidence 67778999999999999843
Done!