BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014352
(426 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/315 (33%), Positives = 177/315 (56%), Gaps = 36/315 (11%)
Query: 94 KDRFTSAPSASG-------IPRYAYKDIQKATQNFTN--ILGQGAFGPVYKATMPSGGVA 144
+D F P+ + R++ +++Q A+ NF+N ILG+G FG VYK + G +
Sbjct: 6 QDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLV 65
Query: 145 AIKVLASDSHQG-EKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNL 203
A+K L + QG E +FQTEV ++ HRNL+ L G+C+ + +L+Y +M+NGS+++
Sbjct: 66 AVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASC 125
Query: 204 IYSE---ERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVAD 260
+ + L+W +R +IAL + G+ YLH+ P +IHRD+K+ANILLD A V D
Sbjct: 126 LRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 185
Query: 261 FGLSKEEVFDGRN----SGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPH 316
FGL+K + D ++ ++GT G+I P Y+ST K + K+D+F +GV++ ELIT
Sbjct: 186 FGLAK--LMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITG---- 239
Query: 317 QNLMEYVNLAS-------------MSQDGVDEILDKQLVGACNIQEVRELARIGHKCLHK 363
Q + LA+ + + ++ ++D L G +EV +L ++ C
Sbjct: 240 QRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQS 299
Query: 364 TPRKRPSIGEVTQAL 378
+P +RP + EV + L
Sbjct: 300 SPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 170/296 (57%), Gaps = 29/296 (9%)
Query: 106 IPRYAYKDIQKATQNFTN--ILGQGAFGPVYKATMPSGGVAAIKVLASDSHQG-EKEFQT 162
+ R++ +++Q A+ NF N ILG+G FG VYK + G + A+K L + QG E +FQT
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT 76
Query: 163 EVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSE---ERVLNWEERLQI 219
EV ++ HRNL+ L G+C+ + +L+Y +M+NGS+++ + + L+W +R +I
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN----SG 275
AL + G+ YLH+ P +IHRD+K+ANILLD A V DFGL+K + D ++
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK--LMDYKDXHVXXA 194
Query: 276 LKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLAS-------- 327
++G G+I P Y+ST K + K+D+F +GV++ ELIT Q + LA+
Sbjct: 195 VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITG----QRAFDLARLANDDDVMLLD 250
Query: 328 -----MSQDGVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
+ + ++ ++D L G +EV +L ++ C +P +RP + EV + L
Sbjct: 251 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 109/292 (37%), Positives = 169/292 (57%), Gaps = 22/292 (7%)
Query: 106 IPRYAYK----DIQKATQNFTN--ILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKE 159
+P +Y+ D+++AT NF + ++G G FG VYK + G A+K +S QG +E
Sbjct: 22 VPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEE 81
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEE---RVLNWEER 216
F+TE+ L H +LV+LIG+C ++ + +LIY++M NG+L +Y + ++WE+R
Sbjct: 82 FETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQR 141
Query: 217 LQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN--- 273
L+I + + G+ YLH A +IHRD+KS NILLD K+ DFG+SK+ G+
Sbjct: 142 LEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLX 198
Query: 274 SGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHP-HQNL-MEYVNLA----- 326
+KGT GYIDP Y + T KSD++SFGV++FE++ A Q+L E VNLA
Sbjct: 199 XVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVE 258
Query: 327 SMSQDGVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
S + +++I+D L + +R+ KCL + RPS+G+V L
Sbjct: 259 SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/292 (37%), Positives = 169/292 (57%), Gaps = 22/292 (7%)
Query: 106 IPRYAYK----DIQKATQNFTN--ILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKE 159
+P +Y+ D+++AT NF + ++G G FG VYK + G A+K +S QG +E
Sbjct: 22 VPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEE 81
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEE---RVLNWEER 216
F+TE+ L H +LV+LIG+C ++ + +LIY++M NG+L +Y + ++WE+R
Sbjct: 82 FETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQR 141
Query: 217 LQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEV-FDGRN-- 273
L+I + + G+ YLH A +IHRD+KS NILLD K+ DFG+SK+ D +
Sbjct: 142 LEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLX 198
Query: 274 SGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHP-HQNL-MEYVNLA----- 326
+KGT GYIDP Y + T KSD++SFGV++FE++ A Q+L E VNLA
Sbjct: 199 XVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVE 258
Query: 327 SMSQDGVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
S + +++I+D L + +R+ KCL + RPS+G+V L
Sbjct: 259 SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 157/292 (53%), Gaps = 27/292 (9%)
Query: 109 YAYKDIQKATQNFT--------NILGQGAFGPVYKATMPSGGVAAIKVLAS---DSHQGE 157
+++ +++ T NF N +G+G FG VYK + + VA K+ A + + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 158 KEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERV--LNWEE 215
++F E+ ++ + H NLV L+G+ D L+Y +M NGSL + + + L+W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 216 RLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK-EEVFDGR-- 272
R +IA ++GI +LHE IHRD+KSANILLD AK++DFGL++ E F
Sbjct: 135 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 273 NSGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT---AIHPH---QNLMEYVNLA 326
S + GT Y+ P + + T KSDI+SFGV++ E+IT A+ H Q L++
Sbjct: 192 XSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI 250
Query: 327 SMSQDGVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
+ +++ +DK++ A + V + + +CLH+ KRP I +V Q L
Sbjct: 251 EDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 157/295 (53%), Gaps = 33/295 (11%)
Query: 109 YAYKDIQKATQNFT--------NILGQGAFGPVYKATMPSGGVAAIKVLAS---DSHQGE 157
+++ +++ T NF N +G+G FG VYK + + VA K+ A + + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 158 KEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERV--LNWEE 215
++F E+ ++ + H NLV L+G+ D L+Y +M NGSL + + + L+W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 216 RLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK------EEVF 269
R +IA ++GI +LHE IHRD+KSANILLD AK++DFGL++ + V
Sbjct: 135 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 270 DGRNSGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT---AIHPH---QNLMEYV 323
R + GT Y+ P + + T KSDI+SFGV++ E+IT A+ H Q L++
Sbjct: 192 XXR---IVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247
Query: 324 NLASMSQDGVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
+ +++ +DK++ A + V + + +CLH+ KRP I +V Q L
Sbjct: 248 EEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 157/295 (53%), Gaps = 33/295 (11%)
Query: 109 YAYKDIQKATQNFT--------NILGQGAFGPVYKATMPSGGVAAIKVLAS---DSHQGE 157
+++ +++ T NF N +G+G FG VYK + + VA K+ A + + +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 158 KEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERV--LNWEE 215
++F E+ ++ + H NLV L+G+ D L+Y +M NGSL + + + L+W
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 128
Query: 216 RLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK------EEVF 269
R +IA ++GI +LHE IHRD+KSANILLD AK++DFGL++ + V
Sbjct: 129 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVM 185
Query: 270 DGRNSGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT---AIHPH---QNLMEYV 323
R + GT Y+ P + + T KSDI+SFGV++ E+IT A+ H Q L++
Sbjct: 186 XXR---IVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 241
Query: 324 NLASMSQDGVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
+ +++ +DK++ A + V + + +CLH+ KRP I +V Q L
Sbjct: 242 EEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 295
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 151/292 (51%), Gaps = 27/292 (9%)
Query: 109 YAYKDIQKATQNFT--------NILGQGAFGPVYKATMPSGGVAAIKVLAS---DSHQGE 157
+++ +++ T NF N G+G FG VYK + + VA K+ A + + +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 158 KEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERV--LNWEE 215
++F E+ + + H NLV L+G+ D L+Y + NGSL + + + L+W
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHX 125
Query: 216 RLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK-EEVFDG--R 272
R +IA ++GI +LHE IHRD+KSANILLD AK++DFGL++ E F
Sbjct: 126 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVX 182
Query: 273 NSGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT---AIHPH---QNLMEYVNLA 326
S + GT Y P + + T KSDI+SFGV++ E+IT A+ H Q L++
Sbjct: 183 XSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI 241
Query: 327 SMSQDGVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
+ +++ +DK+ A + V + +CLH+ KRP I +V Q L
Sbjct: 242 EDEEKTIEDYIDKKXNDA-DSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLL 292
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 17/272 (6%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEK--EFQTEVSLLGRL 170
DI N +G G+FG V++A G A+K+L E+ EF EV+++ RL
Sbjct: 33 DIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRL 91
Query: 171 HHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSE--ERVLNWEERLQIALDISHGIE 228
H N+V +G ++ E++S GSL L++ L+ RL +A D++ G+
Sbjct: 92 RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 229 YLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLS--KEEVFDGRNSGLKGTYGYIDPA 286
YLH PP++HR+LKS N+L+D KV DFGLS K F S GT ++ P
Sbjct: 152 YLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSA-AGTPEWMAPE 209
Query: 287 YISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACN 346
+ KSD++SFGVI++EL T P NL +A++ K+L N
Sbjct: 210 VLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG------FKCKRLEIPRN 263
Query: 347 IQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
+ ++A I C P KRPS + L
Sbjct: 264 LNP--QVAAIIEGCWTNEPWKRPSFATIMDLL 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 132/271 (48%), Gaps = 15/271 (5%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEK--EFQTEVSLLGRL 170
DI N +G G+FG V++A G A+K+L E+ EF EV+++ RL
Sbjct: 33 DIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRL 91
Query: 171 HHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSE--ERVLNWEERLQIALDISHGIE 228
H N+V +G ++ E++S GSL L++ L+ RL +A D++ G+
Sbjct: 92 RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 229 YLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGL-KGTYGYIDPAY 287
YLH PP++HRDLKS N+L+D KV DFGLS+ + S GT ++ P
Sbjct: 152 YLHNRN-PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEV 210
Query: 288 ISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNI 347
+ KSD++SFGVI++EL T P NL +A++ K+L N+
Sbjct: 211 LRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG------FKCKRLEIPRNL 264
Query: 348 QEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
++A I C P KRPS + L
Sbjct: 265 NP--QVAAIIEGCWTNEPWKRPSFATIMDLL 293
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 144/289 (49%), Gaps = 26/289 (8%)
Query: 105 GIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEKEFQTE 163
G P Y ++++ + LG G +G VY+ + A+K L D+ + E EF E
Sbjct: 14 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE 72
Query: 164 VSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERV-LNWEERLQIALD 222
+++ + H NLV L+G C + + +I EFM+ G+L + + R +N L +A
Sbjct: 73 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQ 132
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN--SGLKGTY 280
IS +EYL + IHRDL + N L+ KVADFGLS+ D +G K
Sbjct: 133 ISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 189
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDK 339
+ P ++ NKF++KSD+++FGV+++E+ T + P+ + +SQ V E+L+K
Sbjct: 190 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-------DLSQ--VYELLEK 240
Query: 340 ----QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQR 384
+ C ++V EL R C P RPS E+ QA + Q
Sbjct: 241 DYRMERPEGCP-EKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQE 285
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 145/293 (49%), Gaps = 34/293 (11%)
Query: 105 GIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEKEFQTE 163
G P Y ++++ + LG G +G VY+ + A+K L D+ + E EF E
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE 59
Query: 164 VSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE-----RLQ 218
+++ + H NLV L+G C + + +I EFM+ G+L + + R N +E L
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSAVVLLY 115
Query: 219 IALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN--SGL 276
+A IS +EYL + IHRDL + N L+ KVADFGLS+ D +G
Sbjct: 116 MATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDE 335
K + P ++ NKF++KSD+++FGV+++E+ T + P+ + +SQ V E
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-------DLSQ--VYE 223
Query: 336 ILDK----QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQR 384
+L+K + C ++V EL R C P RPS E+ QA + Q
Sbjct: 224 LLEKDYRMERPEGCP-EKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQE 272
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 145/293 (49%), Gaps = 34/293 (11%)
Query: 105 GIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEKEFQTE 163
G P Y ++++ + LG G +G VY+ + A+K L D+ + E EF E
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE 59
Query: 164 VSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE-----RLQ 218
+++ + H NLV L+G C + + +I EFM+ G+L + + R N +E L
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL----RECNRQEVSAVVLLY 115
Query: 219 IALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN--SGL 276
+A IS +EYL + IHRDL + N L+ KVADFGLS+ D +G
Sbjct: 116 MATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDE 335
K + P ++ NKF++KSD+++FGV+++E+ T + P+ + +SQ V E
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-------DLSQ--VYE 223
Query: 336 ILDK----QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQR 384
+L+K + C ++V EL R C P RPS E+ QA + Q
Sbjct: 224 LLEKDYRMERPEGCP-EKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQE 272
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 143/287 (49%), Gaps = 34/287 (11%)
Query: 105 GIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEKEFQTE 163
G P Y ++++ + LG G +G VY+ + A+K L D+ + E EF E
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE 59
Query: 164 VSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE-----RLQ 218
+++ + H NLV L+G C + + +I EFM+ G+L + + R N +E L
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL----RECNRQEVSAVVLLY 115
Query: 219 IALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN--SGL 276
+A IS +EYL + IHRDL + N L+ KVADFGLS+ D +G
Sbjct: 116 MATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDE 335
K + P ++ NKF++KSD+++FGV+++E+ T + P+ + +SQ V E
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-------DLSQ--VYE 223
Query: 336 ILDK----QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
+L+K + C ++V EL R C P RPS E+ QA
Sbjct: 224 LLEKDYRMERPEGCP-EKVYELMR---ACWQWNPSDRPSFAEIHQAF 266
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 145/292 (49%), Gaps = 34/292 (11%)
Query: 105 GIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEKEFQTE 163
G P Y ++++ + LG G +G VY+ + A+K L D+ + E EF E
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE 59
Query: 164 VSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE-----RLQ 218
+++ + H NLV L+G C + + +I EFM+ G+L + + R N +E L
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSAVVLLY 115
Query: 219 IALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN--SGL 276
+A IS +EYL + IHRDL + N L+ KVADFGLS+ D +G
Sbjct: 116 MATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDE 335
K + P ++ NKF++KSD+++FGV+++E+ T + P+ + +SQ V E
Sbjct: 173 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-------DLSQ--VYE 223
Query: 336 ILDK----QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQ 383
+L+K + C ++V EL R C P RPS E+ QA + Q
Sbjct: 224 LLEKDYRMERPEGCP-EKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 141/281 (50%), Gaps = 26/281 (9%)
Query: 107 PRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEKEFQTEVS 165
P Y ++++ + LG G +G VY+ + A+K L D+ + E EF E +
Sbjct: 4 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 62
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERV-LNWEERLQIALDIS 224
++ + H NLV L+G C + + +I EFM+ G+L + + R +N L +A IS
Sbjct: 63 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 122
Query: 225 HGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN--SGLKGTYGY 282
+EYL + IHRDL + N L+ KVADFGLS+ D +G K +
Sbjct: 123 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 179
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDK-- 339
P ++ NKF++KSD+++FGV+++E+ T + P+ + +SQ V E+L+K
Sbjct: 180 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-------DLSQ--VYELLEKDY 230
Query: 340 --QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
+ C ++V EL R C P RPS E+ QA
Sbjct: 231 RMERPEGCP-EKVYELMR---ACWQWNPSDRPSFAEIHQAF 267
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 143/287 (49%), Gaps = 26/287 (9%)
Query: 107 PRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEKEFQTEVS 165
P Y ++++ + LG G +G VY+ + A+K L D+ + E EF E +
Sbjct: 8 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 66
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERV-LNWEERLQIALDIS 224
++ + H NLV L+G C + + +I EFM+ G+L + + R +N L +A IS
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 225 HGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN--SGLKGTYGY 282
+EYL + IHRDL + N L+ KVADFGLS+ D +G K +
Sbjct: 127 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 183
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDK-- 339
P ++ NKF++KSD+++FGV+++E+ T + P+ + +SQ V E+L+K
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-------DLSQ--VYELLEKDY 234
Query: 340 --QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQR 384
+ C ++V EL R C P RPS E+ QA + Q
Sbjct: 235 RMERPEGCP-EKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 149/294 (50%), Gaps = 39/294 (13%)
Query: 104 SGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGE----- 157
S +P A +I+ Q +G+G FG V+K + V AIK L +GE
Sbjct: 11 SRLPTLADNEIEYEKQ-----IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE 65
Query: 158 --KEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE 215
+EFQ EV ++ L+H N+V L G + + ++ EF+ G L + + + + W
Sbjct: 66 KFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSV 123
Query: 216 RLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHF-----MRAKVADFGLSKEEVFD 270
+L++ LDI+ GIEY+ + PP++HRDL+S NI L + AKVADFGLS++ V
Sbjct: 124 KLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS 182
Query: 271 GRNSGLKGTYGYIDPAYISTNK--FTMKSDIFSFGVIIFELITAIHPHQNL----MEYVN 324
SGL G + ++ P I + +T K+D +SF +I++ ++T P ++++N
Sbjct: 183 --VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN 240
Query: 325 LASMSQDGVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
+ + ++G+ + + ++ V EL C P+KRP + + L
Sbjct: 241 M--IREEGLRPTIPEDC--PPRLRNVIEL------CWSGDPKKRPHFSYIVKEL 284
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 143/286 (50%), Gaps = 26/286 (9%)
Query: 107 PRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEKEFQTEVS 165
P Y ++++ + LG G +G VY+ + A+K L D+ + E EF E +
Sbjct: 8 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 66
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERV-LNWEERLQIALDIS 224
++ + H NLV L+G C + + +I EFM+ G+L + + R +N L +A IS
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 225 HGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN--SGLKGTYGY 282
+EYL + IHRDL + N L+ KVADFGLS+ D +G K +
Sbjct: 127 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDK-- 339
P ++ NKF++KSD+++FGV+++E+ T + P+ + +SQ V E+L+K
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-------DLSQ--VYELLEKDY 234
Query: 340 --QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQ 383
+ C ++V EL R C P RPS E+ QA + Q
Sbjct: 235 RMERPEGCP-EKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 143/286 (50%), Gaps = 26/286 (9%)
Query: 107 PRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEKEFQTEVS 165
P Y ++++ + LG G +G VY+ + A+K L D+ + E EF E +
Sbjct: 3 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 61
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERV-LNWEERLQIALDIS 224
++ + H NLV L+G C + + +I EFM+ G+L + + R +N L +A IS
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 121
Query: 225 HGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN--SGLKGTYGY 282
+EYL + IHRDL + N L+ KVADFGLS+ D +G K +
Sbjct: 122 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDK-- 339
P ++ NKF++KSD+++FGV+++E+ T + P+ + +SQ V E+L+K
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-------DLSQ--VYELLEKDY 229
Query: 340 --QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQ 383
+ C ++V EL R C P RPS E+ QA + Q
Sbjct: 230 RMERPEGCP-EKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 143/287 (49%), Gaps = 26/287 (9%)
Query: 107 PRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEKEFQTEVS 165
P Y ++++ + LG G +G VY+ + A+K L D+ + E EF E +
Sbjct: 4 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 62
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERV-LNWEERLQIALDIS 224
++ + H NLV L+G C + + +I EFM+ G+L + + R +N L +A IS
Sbjct: 63 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 122
Query: 225 HGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN--SGLKGTYGY 282
+EYL + IHRDL + N L+ KVADFGLS+ D +G K +
Sbjct: 123 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW 179
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDK-- 339
P ++ NKF++KSD+++FGV+++E+ T + P+ + +SQ V E+L+K
Sbjct: 180 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-------DLSQ--VYELLEKDY 230
Query: 340 --QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQR 384
+ C ++V EL R C P RPS E+ QA + Q
Sbjct: 231 RMERPEGCP-EKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQE 273
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 143/287 (49%), Gaps = 26/287 (9%)
Query: 107 PRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEKEFQTEVS 165
P Y ++++ + LG G +G VY+ + A+K L D+ + E EF E +
Sbjct: 8 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 66
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERV-LNWEERLQIALDIS 224
++ + H NLV L+G C + + +I EFM+ G+L + + R +N L +A IS
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 225 HGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN--SGLKGTYGY 282
+EYL + IHRDL + N L+ KVADFGLS+ D +G K +
Sbjct: 127 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDK-- 339
P ++ NKF++KSD+++FGV+++E+ T + P+ + +SQ V E+L+K
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-------DLSQ--VYELLEKDY 234
Query: 340 --QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQR 384
+ C ++V EL R C P RPS E+ QA + Q
Sbjct: 235 RMERPEGCP-EKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQE 277
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 143/287 (49%), Gaps = 26/287 (9%)
Query: 107 PRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEKEFQTEVS 165
P Y ++++ + LG G +G VY+ + A+K L D+ + E EF E +
Sbjct: 7 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 65
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERV-LNWEERLQIALDIS 224
++ + H NLV L+G C + + +I EFM+ G+L + + R +N L +A IS
Sbjct: 66 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 125
Query: 225 HGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN--SGLKGTYGY 282
+EYL + IHRDL + N L+ KVADFGLS+ D +G K +
Sbjct: 126 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 182
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDK-- 339
P ++ NKF++KSD+++FGV+++E+ T + P+ + +SQ V E+L+K
Sbjct: 183 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-------DLSQ--VYELLEKDY 233
Query: 340 --QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQR 384
+ C ++V EL R C P RPS E+ QA + Q
Sbjct: 234 RMERPEGCP-EKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQE 276
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 143/286 (50%), Gaps = 26/286 (9%)
Query: 107 PRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEKEFQTEVS 165
P Y ++++ + LG G +G VY+ + A+K L D+ + E EF E +
Sbjct: 8 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 66
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERV-LNWEERLQIALDIS 224
++ + H NLV L+G C + + +I EFM+ G+L + + R +N L +A IS
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 225 HGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN--SGLKGTYGY 282
+EYL + IHRDL + N L+ KVADFGLS+ D +G K +
Sbjct: 127 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 183
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDK-- 339
P ++ NKF++KSD+++FGV+++E+ T + P+ + +SQ V E+L+K
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-------DLSQ--VYELLEKDY 234
Query: 340 --QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQ 383
+ C ++V EL R C P RPS E+ QA + Q
Sbjct: 235 RMERPEGCP-EKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 143/287 (49%), Gaps = 26/287 (9%)
Query: 107 PRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEKEFQTEVS 165
P Y ++++ + LG G +G VY+ + A+K L D+ + E EF E +
Sbjct: 5 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 63
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERV-LNWEERLQIALDIS 224
++ + H NLV L+G C + + +I EFM+ G+L + + R +N L +A IS
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 225 HGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN--SGLKGTYGY 282
+EYL + IHRDL + N L+ KVADFGLS+ D +G K +
Sbjct: 124 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW 180
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDK-- 339
P ++ NKF++KSD+++FGV+++E+ T + P+ + +SQ V E+L+K
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-------DLSQ--VYELLEKDY 231
Query: 340 --QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQR 384
+ C ++V EL R C P RPS E+ QA + Q
Sbjct: 232 RMERPEGCP-EKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQE 274
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 144/290 (49%), Gaps = 34/290 (11%)
Query: 107 PRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEKEFQTEVS 165
P Y ++++ + LG G +G VY+ + A+K L D+ + E EF E +
Sbjct: 8 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 66
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE-----RLQIA 220
++ + H NLV L+G C + + +I EFM+ G+L + + R N +E L +A
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSAVVLLYMA 122
Query: 221 LDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN--SGLKG 278
IS +EYL + IHRDL + N L+ KVADFGLS+ D +G K
Sbjct: 123 TQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF 179
Query: 279 TYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEIL 337
+ P ++ NKF++KSD+++FGV+++E+ T + P+ + +SQ V E+L
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-------DLSQ--VYELL 230
Query: 338 DK----QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQ 383
+K + C ++V EL R C P RPS E+ QA + Q
Sbjct: 231 EKDYRMERPEGCP-EKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 141/281 (50%), Gaps = 26/281 (9%)
Query: 107 PRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEKEFQTEVS 165
P Y ++++ + LG G +G VY+ + A+K L D+ + E EF E +
Sbjct: 3 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 61
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERV-LNWEERLQIALDIS 224
++ + H NLV L+G C + + +I EFM+ G+L + + R +N L +A IS
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 121
Query: 225 HGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN--SGLKGTYGY 282
+EYL + IHRDL + N L+ KVADFGLS+ D +G K +
Sbjct: 122 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDK-- 339
P ++ NKF++KSD+++FGV+++E+ T + P+ + +SQ V E+L+K
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-------DLSQ--VYELLEKDY 229
Query: 340 --QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
+ C ++V EL R C P RPS E+ QA
Sbjct: 230 RMERPEGCP-EKVYELMR---ACWQWNPSDRPSFAEIHQAF 266
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 144/287 (50%), Gaps = 26/287 (9%)
Query: 107 PRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEKEFQTEVS 165
P Y ++++ + LG G +G VY+ + A+K L D+ + E EF E +
Sbjct: 5 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 63
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERV-LNWEERLQIALDIS 224
++ + H NLV L+G C + + +I EFM+ G+L + + R +N L +A IS
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 225 HGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGR--NSGLKGTYGY 282
+EYL + IHRDL + N L+ KVADFGLS+ D ++G K +
Sbjct: 124 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 180
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDK-- 339
P ++ NKF++KSD+++FGV+++E+ T + P+ + +SQ V E+L+K
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-------DLSQ--VYELLEKDY 231
Query: 340 --QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQR 384
+ C ++V EL R C P RPS E+ QA + Q
Sbjct: 232 RMERPEGCP-EKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQE 274
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 143/287 (49%), Gaps = 26/287 (9%)
Query: 107 PRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEKEFQTEVS 165
P Y ++++ + LG G +G VY+ + A+K L D+ + E EF E +
Sbjct: 5 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 63
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERV-LNWEERLQIALDIS 224
++ + H NLV L+G C + + +I EFM+ G+L + + R +N L +A IS
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 225 HGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN--SGLKGTYGY 282
+EYL + IHRDL + N L+ KVADFGLS+ D +G K +
Sbjct: 124 SAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 180
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDK-- 339
P ++ NKF++KSD+++FGV+++E+ T + P+ + +SQ V E+L+K
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-------DLSQ--VYELLEKDY 231
Query: 340 --QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQR 384
+ C ++V EL R C P RPS E+ QA + Q
Sbjct: 232 RMERPEGCP-EKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQE 274
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 148/293 (50%), Gaps = 27/293 (9%)
Query: 101 PSASGI-PRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEK 158
P+ G+ P Y ++++ + LG G +G VY+ + A+K L D+ + E
Sbjct: 200 PTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE- 258
Query: 159 EFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERV-LNWEERL 217
EF E +++ + H NLV L+G C + + +I EFM+ G+L + + R +N L
Sbjct: 259 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 318
Query: 218 QIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFD--GRNSG 275
+A IS +EYL + IHR+L + N L+ KVADFGLS+ D ++G
Sbjct: 319 YMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 375
Query: 276 LKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVD 334
K + P ++ NKF++KSD+++FGV+++E+ T + P+ + +SQ V
Sbjct: 376 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-------DLSQ--VY 426
Query: 335 EILDK----QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQ 383
E+L+K + C ++V EL R C P RPS E+ QA + Q
Sbjct: 427 ELLEKDYRMERPEGCP-EKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQ 475
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 148/293 (50%), Gaps = 27/293 (9%)
Query: 101 PSASGI-PRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEK 158
P+ G+ P Y ++++ + LG G +G VY+ + A+K L D+ + E
Sbjct: 242 PTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE- 300
Query: 159 EFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERV-LNWEERL 217
EF E +++ + H NLV L+G C + + +I EFM+ G+L + + R +N L
Sbjct: 301 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLL 360
Query: 218 QIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFD--GRNSG 275
+A IS +EYL + IHR+L + N L+ KVADFGLS+ D ++G
Sbjct: 361 YMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 417
Query: 276 LKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVD 334
K + P ++ NKF++KSD+++FGV+++E+ T + P+ + +SQ V
Sbjct: 418 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-------DLSQ--VY 468
Query: 335 EILDK----QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQ 383
E+L+K + C ++V EL R C P RPS E+ QA + Q
Sbjct: 469 ELLEKDYRMERPEGCP-EKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQ 517
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 149/297 (50%), Gaps = 35/297 (11%)
Query: 101 PSASGI-PRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEK 158
P+ G+ P Y ++++ + LG G +G VY+ + A+K L D+ + E
Sbjct: 203 PTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE- 261
Query: 159 EFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE--- 215
EF E +++ + H NLV L+G C + + +I EFM+ G+L + + R N +E
Sbjct: 262 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSA 317
Query: 216 --RLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFD--G 271
L +A IS +EYL + IHR+L + N L+ KVADFGLS+ D
Sbjct: 318 VVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 374
Query: 272 RNSGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQ 330
++G K + P ++ NKF++KSD+++FGV+++E+ T + P+ + +SQ
Sbjct: 375 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-------DLSQ 427
Query: 331 DGVDEILDK----QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQ 383
V E+L+K + C ++V EL R C P RPS E+ QA + Q
Sbjct: 428 --VYELLEKDYRMERPEGCP-EKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQ 478
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 148/294 (50%), Gaps = 39/294 (13%)
Query: 104 SGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGE----- 157
S +P A +I+ Q +G+G FG V+K + V AIK L +GE
Sbjct: 11 SRLPTLADNEIEYEKQ-----IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE 65
Query: 158 --KEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE 215
+EFQ EV ++ L+H N+V L G + + ++ EF+ G L + + + + W
Sbjct: 66 KFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSV 123
Query: 216 RLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHF-----MRAKVADFGLSKEEVFD 270
+L++ LDI+ GIEY+ + PP++HRDL+S NI L + AKVADFG S++ V
Sbjct: 124 KLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHS 182
Query: 271 GRNSGLKGTYGYIDPAYISTNK--FTMKSDIFSFGVIIFELITAIHPHQNL----MEYVN 324
SGL G + ++ P I + +T K+D +SF +I++ ++T P ++++N
Sbjct: 183 --VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN 240
Query: 325 LASMSQDGVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
+ + ++G+ + + ++ V EL C P+KRP + + L
Sbjct: 241 M--IREEGLRPTIPEDC--PPRLRNVIEL------CWSGDPKKRPHFSYIVKEL 284
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 148/294 (50%), Gaps = 39/294 (13%)
Query: 104 SGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGE----- 157
S +P A +I+ Q +G+G FG V+K + V AIK L +GE
Sbjct: 11 SRLPTLADNEIEYEKQ-----IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE 65
Query: 158 --KEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE 215
+EFQ EV ++ L+H N+V L G + + ++ EF+ G L + + + + W
Sbjct: 66 KFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSV 123
Query: 216 RLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHF-----MRAKVADFGLSKEEVFD 270
+L++ LDI+ GIEY+ + PP++HRDL+S NI L + AKVADF LS++ V
Sbjct: 124 KLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHS 182
Query: 271 GRNSGLKGTYGYIDPAYISTNK--FTMKSDIFSFGVIIFELITAIHPHQNL----MEYVN 324
SGL G + ++ P I + +T K+D +SF +I++ ++T P ++++N
Sbjct: 183 --VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN 240
Query: 325 LASMSQDGVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
+ + ++G+ + + ++ V EL C P+KRP + + L
Sbjct: 241 M--IREEGLRPTIPEDC--PPRLRNVIEL------CWSGDPKKRPHFSYIVKEL 284
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 137/279 (49%), Gaps = 34/279 (12%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEKEFQTEVSLLGRLH 171
++++ + LG G FG VY+ + A+K L D+ + E EF E +++ +
Sbjct: 7 EMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 65
Query: 172 HRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE-----RLQIALDISHG 226
H NLV L+G C + + +I EFM+ G+L + + R N +E L +A IS
Sbjct: 66 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSAVVLLYMATQISSA 121
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN--SGLKGTYGYID 284
+EYL + IHRDL + N L+ KVADFGLS+ D +G K +
Sbjct: 122 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTA 178
Query: 285 PAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDK---- 339
P ++ NKF++KSD+++FGV+++E+ T + P+ + V E+L+K
Sbjct: 179 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI---------DPSQVYELLEKDYRM 229
Query: 340 QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
+ C ++V EL R C P RPS E+ QA
Sbjct: 230 ERPEGCP-EKVYELMR---ACWQWNPSDRPSFAEIHQAF 264
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 139/285 (48%), Gaps = 34/285 (11%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEKEFQTEVSLLGRLH 171
++++ + LG G +G VY+ + A+K L D+ + E EF E +++ +
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 65
Query: 172 HRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE-----RLQIALDISHG 226
H NLV L+G C + + +I EFM+ G+L + + R N +E L +A IS
Sbjct: 66 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL----RECNRQEVSAVVLLYMATQISSA 121
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN--SGLKGTYGYID 284
+EYL + IHRDL + N L+ KVADFGLS+ D +G K +
Sbjct: 122 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTA 178
Query: 285 PAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDK---- 339
P ++ NKF++KSD+++FGV+++E+ T + P+ + V E+L+K
Sbjct: 179 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI---------DPSQVYELLEKDYRM 229
Query: 340 QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQR 384
+ C ++V EL R C P RPS E+ QA + Q
Sbjct: 230 ERPEGCP-EKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQE 270
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 131/286 (45%), Gaps = 34/286 (11%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSH----QGEKEFQTEVSLLG 168
+I A I+G G FG VY+A G A+K D Q + + E L
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFA 61
Query: 169 RLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERV-----LNWEERLQIALDI 223
L H N++ L G C+ + L+ EF G L N + S +R+ +NW A+ I
Sbjct: 62 MLKHPNIIALRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDILVNW------AVQI 114
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMR--------AKVADFGLSKEEVFDGRNSG 275
+ G+ YLH+ A+ P+IHRDLKS+NIL+ + K+ DFGL++E + S
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA 174
Query: 276 LKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDE 335
G Y ++ P I + F+ SD++S+GV+++EL+T P + + ++ +
Sbjct: 175 -AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNK--- 230
Query: 336 ILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
L + C A++ C + P RPS + L I
Sbjct: 231 -LALPIPSTCP----EPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 138/279 (49%), Gaps = 34/279 (12%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEKEFQTEVSLLGRLH 171
++++ + LG G +G VY+ + A+K L D+ + E EF E +++ +
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 65
Query: 172 HRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE-----RLQIALDISHG 226
H NLV L+G C + + +I EFM+ G+L + + R N +E L +A IS
Sbjct: 66 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSAVVLLYMATQISSA 121
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFD--GRNSGLKGTYGYID 284
+EYL + IHRDL + N L+ KVADFGLS+ D ++G K +
Sbjct: 122 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTA 178
Query: 285 PAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDK---- 339
P ++ NKF++KSD+++FGV+++E+ T + P+ + V E+L+K
Sbjct: 179 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI---------DPSQVYELLEKDYRM 229
Query: 340 QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
+ C ++V EL R C P RPS E+ QA
Sbjct: 230 ERPEGCP-EKVYELMR---ACWQWNPSDRPSFAEIHQAF 264
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 138/281 (49%), Gaps = 26/281 (9%)
Query: 114 IQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHR 173
I + F +G G FG V+ + AIK + + E++F E ++ +L H
Sbjct: 2 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHP 60
Query: 174 NLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
LV L G C+++ L++EFM +G LS+ + ++ + E L + LD+ G+ YL E
Sbjct: 61 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 120
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNS--GLKGTYGYIDPAYISTN 291
VIHRDL + N L+ KV+DFG+++ + D S G K + P S +
Sbjct: 121 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 177
Query: 292 KFTMKSDIFSFGVIIFELITAIH-PHQNLMEYVNLASMSQDGVDEI-----LDKQLVGAC 345
+++ KSD++SFGV+++E+ + P++N + + V++I L K + +
Sbjct: 178 RYSSKSDVWSFGVLMWEVFSEGKIPYEN--------RSNSEVVEDISTGFRLYKPRLAST 229
Query: 346 NIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHL 386
++ + I + C + P RP+ + + L +I + L
Sbjct: 230 HVYQ------IMNHCWKERPEDRPAFSRLLRQLAEIAESGL 264
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 138/281 (49%), Gaps = 26/281 (9%)
Query: 114 IQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHR 173
I + F +G G FG V+ + AIK + + E++F E ++ +L H
Sbjct: 7 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHP 65
Query: 174 NLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
LV L G C+++ L++EFM +G LS+ + ++ + E L + LD+ G+ YL E
Sbjct: 66 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 125
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNS--GLKGTYGYIDPAYISTN 291
VIHRDL + N L+ KV+DFG+++ + D S G K + P S +
Sbjct: 126 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 182
Query: 292 KFTMKSDIFSFGVIIFELITAIH-PHQNLMEYVNLASMSQDGVDEI-----LDKQLVGAC 345
+++ KSD++SFGV+++E+ + P++N + + V++I L K + +
Sbjct: 183 RYSSKSDVWSFGVLMWEVFSEGKIPYEN--------RSNSEVVEDISTGFRLYKPRLAST 234
Query: 346 NIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHL 386
++ + I + C + P RP+ + + L +I + L
Sbjct: 235 HVYQ------IMNHCWRERPEDRPAFSRLLRQLAEIAESGL 269
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 137/281 (48%), Gaps = 26/281 (9%)
Query: 114 IQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHR 173
I + F +G G FG V+ + AIK + S E +F E ++ +L H
Sbjct: 24 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHP 82
Query: 174 NLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
LV L G C+++ L++EFM +G LS+ + ++ + E L + LD+ G+ YL E
Sbjct: 83 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 142
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNS--GLKGTYGYIDPAYISTN 291
VIHRDL + N L+ KV+DFG+++ + D S G K + P S +
Sbjct: 143 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 199
Query: 292 KFTMKSDIFSFGVIIFELITAIH-PHQNLMEYVNLASMSQDGVDEI-----LDKQLVGAC 345
+++ KSD++SFGV+++E+ + P++N + + V++I L K + +
Sbjct: 200 RYSSKSDVWSFGVLMWEVFSEGKIPYEN--------RSNSEVVEDISTGFRLYKPRLAST 251
Query: 346 NIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHL 386
++ + I + C + P RP+ + + L +I + L
Sbjct: 252 HVYQ------IMNHCWKERPEDRPAFSRLLRQLAEIAESGL 286
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 138/281 (49%), Gaps = 26/281 (9%)
Query: 114 IQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHR 173
I + F +G G FG V+ + AIK + + E++F E ++ +L H
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHP 62
Query: 174 NLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
LV L G C+++ L++EFM +G LS+ + ++ + E L + LD+ G+ YL E
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNS--GLKGTYGYIDPAYISTN 291
VIHRDL + N L+ KV+DFG+++ + D S G K + P S +
Sbjct: 123 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 179
Query: 292 KFTMKSDIFSFGVIIFELITAIH-PHQNLMEYVNLASMSQDGVDEI-----LDKQLVGAC 345
+++ KSD++SFGV+++E+ + P++N + + V++I L K + +
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGKIPYEN--------RSNSEVVEDISTGFRLYKPRLAST 231
Query: 346 NIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHL 386
++ + I + C + P RP+ + + L +I + L
Sbjct: 232 HVYQ------IMNHCWKERPEDRPAFSRLLRQLAEIAESGL 266
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 111/208 (53%), Gaps = 7/208 (3%)
Query: 114 IQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHR 173
I + F +G G FG V+ + AIK + + E++F E ++ +L H
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHP 62
Query: 174 NLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
LV L G C+++ L++EFM +G LS+ + ++ + E L + LD+ G+ YL E
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNS--GLKGTYGYIDPAYISTN 291
+ VIHRDL + N L+ KV+DFG+++ + D S G K + P S +
Sbjct: 123 S---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 179
Query: 292 KFTMKSDIFSFGVIIFELITAIH-PHQN 318
+++ KSD++SFGV+++E+ + P++N
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGKIPYEN 207
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 137/281 (48%), Gaps = 26/281 (9%)
Query: 114 IQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHR 173
I + F +G G FG V+ + AIK + + E++F E ++ +L H
Sbjct: 5 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHP 63
Query: 174 NLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
LV L G C+++ L+ EFM +G LS+ + ++ + E L + LD+ G+ YL E
Sbjct: 64 KLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 123
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNS--GLKGTYGYIDPAYISTN 291
VIHRDL + N L+ KV+DFG+++ + D S G K + P S +
Sbjct: 124 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 180
Query: 292 KFTMKSDIFSFGVIIFELITAIH-PHQNLMEYVNLASMSQDGVDEI-----LDKQLVGAC 345
+++ KSD++SFGV+++E+ + P++N + + V++I L K + +
Sbjct: 181 RYSSKSDVWSFGVLMWEVFSEGKIPYEN--------RSNSEVVEDISTGFRLYKPRLAST 232
Query: 346 NIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHL 386
++ + I + C + P RP+ + + L +I + L
Sbjct: 233 HVYQ------IMNHCWRERPEDRPAFSRLLRQLAEIAESGL 267
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 139/290 (47%), Gaps = 26/290 (8%)
Query: 98 TSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGE 157
TS P G+ + A+ +I + + LGQG FG V+ T AIK L + E
Sbjct: 166 TSKPQTQGLAKDAW-EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE 224
Query: 158 KEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEE-RVLNWEER 216
F E ++ +L H LV L ++ Y ++ E+MS GSL + + E + L +
Sbjct: 225 A-FLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQL 282
Query: 217 LQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRN 273
+ +A I+ G+ Y+ +HRDL++ANIL+ + KVADFGL++ + + R
Sbjct: 283 VDMAAQIASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Query: 274 SGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGV 333
G K + P +FT+KSD++SFG+++ EL T + + Y + +
Sbjct: 340 -GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT-----KGRVPYPGMVNR----- 388
Query: 334 DEILDKQLVG---ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLK 380
E+LD+ G C + L + +C K P +RP+ E QA L+
Sbjct: 389 -EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF-EYLQAFLE 436
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 139/290 (47%), Gaps = 26/290 (8%)
Query: 98 TSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGE 157
TS P G+ + A+ +I + + LGQG FG V+ T AIK L + E
Sbjct: 249 TSKPQTQGLAKDAW-EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE 307
Query: 158 KEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEE-RVLNWEER 216
F E ++ +L H LV L ++ Y ++ E+MS GSL + + E + L +
Sbjct: 308 A-FLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQL 365
Query: 217 LQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRN 273
+ +A I+ G+ Y+ +HRDL++ANIL+ + KVADFGL++ + + R
Sbjct: 366 VDMAAQIASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 422
Query: 274 SGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGV 333
G K + P +FT+KSD++SFG+++ EL T + + Y + +
Sbjct: 423 -GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT-----KGRVPYPGMVNR----- 471
Query: 334 DEILDKQLVG---ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLK 380
E+LD+ G C + L + +C K P +RP+ E QA L+
Sbjct: 472 -EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF-EYLQAFLE 519
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 139/290 (47%), Gaps = 26/290 (8%)
Query: 98 TSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGE 157
TS P G+ + A+ +I + + LGQG FG V+ T AIK L + E
Sbjct: 166 TSKPQTQGLAKDAW-EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE 224
Query: 158 KEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEE-RVLNWEER 216
F E ++ +L H LV L ++ Y ++ E+MS GSL + + E + L +
Sbjct: 225 A-FLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQL 282
Query: 217 LQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRN 273
+ +A I+ G+ Y+ +HRDL++ANIL+ + KVADFGL++ + + R
Sbjct: 283 VDMAAQIASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Query: 274 SGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGV 333
G K + P +FT+KSD++SFG+++ EL T + + Y + +
Sbjct: 340 -GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT-----KGRVPYPGMVNR----- 388
Query: 334 DEILDKQLVG---ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLK 380
E+LD+ G C + L + +C K P +RP+ E QA L+
Sbjct: 389 -EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF-EYLQAFLE 436
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 140/293 (47%), Gaps = 47/293 (16%)
Query: 121 FTNILGQGAFGPVYKAT---MPSGGVA---AIKVLASDSHQGEKE-FQTEVSLLGRL-HH 172
F +LG GAFG V AT + GV+ A+K+L + E+E +E+ ++ +L H
Sbjct: 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH 108
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLI------YSEER----------------V 210
N+VNL+G C G LI+E+ G L N + +SE+ V
Sbjct: 109 ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168
Query: 211 LNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFD 270
L +E+ L A ++ G+E+L +HRDL + N+L+ H K+ DFGL++ ++
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLAR-DIMS 224
Query: 271 GRNSGLKGT----YGYIDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNL 325
N ++G ++ P + +T+KSD++S+G++++E+ + ++P+ + N
Sbjct: 225 DSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANF 284
Query: 326 ASMSQDGVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
+ Q+G +D+ E+ I C RKRPS +T L
Sbjct: 285 YKLIQNGFK--MDQPFYAT------EEIYIIMQSCWAFDSRKRPSFPNLTSFL 329
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 139/290 (47%), Gaps = 26/290 (8%)
Query: 98 TSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGE 157
TS P G+ + A+ +I + + LGQG FG V+ T AIK L + E
Sbjct: 166 TSKPQTQGLAKDAW-EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE 224
Query: 158 KEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEE-RVLNWEER 216
F E ++ +L H LV L ++ Y ++ E+MS GSL + + E + L +
Sbjct: 225 A-FLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVGEYMSKGSLLDFLKGETGKYLRLPQL 282
Query: 217 LQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRN 273
+ +A I+ G+ Y+ +HRDL++ANIL+ + KVADFGL++ + + R
Sbjct: 283 VDMAAQIASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Query: 274 SGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGV 333
G K + P +FT+KSD++SFG+++ EL T + + Y + +
Sbjct: 340 -GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT-----KGRVPYPGMVNR----- 388
Query: 334 DEILDKQLVG---ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLK 380
E+LD+ G C + L + +C K P +RP+ E QA L+
Sbjct: 389 -EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTF-EYLQAFLE 436
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 107/205 (52%), Gaps = 16/205 (7%)
Query: 121 FTNILGQGAFGPVYKATMP-----SGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNL 175
F LG+G FG V +G V A+K L + + ++F+ E+ +L L H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 176 VNLIGYCVDKGK--YMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
V G C G+ LI E++ GSL + + + ++ + LQ I G+EYL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--- 130
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYI 288
IHRDL + NIL+++ R K+ DFGL+K +E F + G + Y P +
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYA-PESL 189
Query: 289 STNKFTMKSDIFSFGVIIFELITAI 313
+ +KF++ SD++SFGV+++EL T I
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYI 214
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 137/267 (51%), Gaps = 36/267 (13%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVL--ASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYC 182
+G G+FG VYK G A+K+L + + Q + F+ EV +L + H N++ +GY
Sbjct: 32 IGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRD 242
K + ++ ++ SL + +++ E ++ + IA + G++YLH ++ IHRD
Sbjct: 90 T-KPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI---IHRD 145
Query: 243 LKSANILLDHFMRAKVADFGLSKEEVFDGRNSG------LKGTYGYIDPAYI---STNKF 293
LKS NI L K+ DFGL+ E+ R SG L G+ ++ P I +N +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEK---SRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 294 TMKSDIFSFGVIIFELITAIHPHQN------LMEYVNLASMSQDGVDEILDKQLVGACNI 347
+ +SD+++FG++++EL+T P+ N ++E V S+S D L K + C
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPD-----LSK-VRSNCP- 255
Query: 348 QEVRELARIGHKCLHKTPRKRPSIGEV 374
+ + R+ +CL K +RPS +
Sbjct: 256 ---KRMKRLMAECLKKKRDERPSFPRI 279
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 138/290 (47%), Gaps = 26/290 (8%)
Query: 98 TSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGE 157
TS P G+ + A+ +I + + LGQG FG V+ T AIK L + E
Sbjct: 167 TSKPQTQGLAKDAW-EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPE 225
Query: 158 KEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEE-RVLNWEER 216
F E ++ +L H LV L ++ Y ++ E+MS GSL + + E + L +
Sbjct: 226 A-FLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQL 283
Query: 217 LQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRN 273
+ +A I+ G+ Y+ +HRDL++ANIL+ + KVADFGL + + + R
Sbjct: 284 VDMAAQIASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQ 340
Query: 274 SGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGV 333
G K + P +FT+KSD++SFG+++ EL T + + Y + +
Sbjct: 341 -GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT-----KGRVPYPGMVNR----- 389
Query: 334 DEILDKQLVG---ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLK 380
E+LD+ G C + L + +C K P +RP+ E QA L+
Sbjct: 390 -EVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTF-EYLQAFLE 437
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 138/288 (47%), Gaps = 24/288 (8%)
Query: 111 YKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRL 170
YK+I+ ++G+GAFG V KA + VA IK + S+S + K F E+ L R+
Sbjct: 7 YKEIE-----VEEVVGRGAFGVVCKAKWRAKDVA-IKQIESESER--KAFIVELRQLSRV 58
Query: 171 HHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWE--ERLQIALDISHGIE 228
+H N+V L G C++ L+ E+ GSL N+++ E + + + L S G+
Sbjct: 59 NHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 116
Query: 229 YLHEGAVPPVIHRDLKSANILL-DHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAY 287
YLH +IHRDLK N+LL K+ DFG + + N+ KG+ ++ P
Sbjct: 117 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN--KGSAAWMAPEV 174
Query: 288 ISTNKFTMKSDIFSFGVIIFELITAIHPHQNL-MEYVNLASMSQDGVDEILDKQLVGACN 346
+ ++ K D+FS+G+I++E+IT P + + +G L K L
Sbjct: 175 FEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNL----- 229
Query: 347 IQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTMSF 394
+ + + +C K P +RPS+ E+ + + + + + + +
Sbjct: 230 ---PKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQY 274
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 138/288 (47%), Gaps = 24/288 (8%)
Query: 111 YKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRL 170
YK+I+ ++G+GAFG V KA + VA IK + S+S + K F E+ L R+
Sbjct: 8 YKEIE-----VEEVVGRGAFGVVCKAKWRAKDVA-IKQIESESER--KAFIVELRQLSRV 59
Query: 171 HHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWE--ERLQIALDISHGIE 228
+H N+V L G C++ L+ E+ GSL N+++ E + + + L S G+
Sbjct: 60 NHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 117
Query: 229 YLHEGAVPPVIHRDLKSANILL-DHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAY 287
YLH +IHRDLK N+LL K+ DFG + + N+ KG+ ++ P
Sbjct: 118 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNN--KGSAAWMAPEV 175
Query: 288 ISTNKFTMKSDIFSFGVIIFELITAIHPHQNL-MEYVNLASMSQDGVDEILDKQLVGACN 346
+ ++ K D+FS+G+I++E+IT P + + +G L K L
Sbjct: 176 FEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNL----- 230
Query: 347 IQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTMSF 394
+ + + +C K P +RPS+ E+ + + + + + + +
Sbjct: 231 ---PKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQY 275
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 136/267 (50%), Gaps = 36/267 (13%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVL--ASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYC 182
+G G+FG VYK G A+K+L + + Q + F+ EV +L + H N++ +GY
Sbjct: 32 IGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRD 242
+ ++ ++ SL + +++ E ++ + IA + G++YLH ++ IHRD
Sbjct: 90 TAP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI---IHRD 145
Query: 243 LKSANILLDHFMRAKVADFGLSKEEVFDGRNSG------LKGTYGYIDPAYI---STNKF 293
LKS NI L K+ DFGL+ E+ R SG L G+ ++ P I +N +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEK---SRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 294 TMKSDIFSFGVIIFELITAIHPHQN------LMEYVNLASMSQDGVDEILDKQLVGACNI 347
+ +SD+++FG++++EL+T P+ N ++E V S+S D L K + C
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPD-----LSK-VRSNCP- 255
Query: 348 QEVRELARIGHKCLHKTPRKRPSIGEV 374
+ + R+ +CL K +RPS +
Sbjct: 256 ---KRMKRLMAECLKKKRDERPSFPRI 279
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 135/267 (50%), Gaps = 36/267 (13%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVL--ASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYC 182
+G G+FG VYK G A+K+L + + Q + F+ EV +L + H N++ +GY
Sbjct: 20 IGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRD 242
K + ++ ++ SL + +++ E ++ + IA + G++YLH ++ IHRD
Sbjct: 78 T-KPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI---IHRD 133
Query: 243 LKSANILLDHFMRAKVADFGLSKEEVFDGRNSG------LKGTYGYIDPAYI---STNKF 293
LKS NI L K+ DFGL+ R SG L G+ ++ P I +N +
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLA---TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 190
Query: 294 TMKSDIFSFGVIIFELITAIHPHQN------LMEYVNLASMSQDGVDEILDKQLVGACNI 347
+ +SD+++FG++++EL+T P+ N ++E V S+S D L K + C
Sbjct: 191 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPD-----LSK-VRSNCP- 243
Query: 348 QEVRELARIGHKCLHKTPRKRPSIGEV 374
+ + R+ +CL K +RPS +
Sbjct: 244 ---KRMKRLMAECLKKKRDERPSFPRI 267
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 127/262 (48%), Gaps = 23/262 (8%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVD 184
LGQG FG V+ T AIK L + E F E ++ +L H LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 185 KGKYMLIYEFMSNGSLSNLIYSEE-RVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDL 243
+ Y++I E+MS GSL + + E + L + + +A I+ G+ Y+ +HRDL
Sbjct: 85 EPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 244 KSANILLDHFMRAKVADFGLSK--EEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFS 301
++ANIL+ + KVADFGL++ E+ G K + P +FT+KSD++S
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 302 FGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVG---ACNIQEVRELARIGH 358
FG+++ EL T + + Y + + E+LD+ G C + L +
Sbjct: 201 FGILLTELTT-----KGRVPYPGMVN------REVLDQVERGYRMPCPPECPESLHDLMC 249
Query: 359 KCLHKTPRKRPSIGEVTQALLK 380
+C K P +RP+ E QA L+
Sbjct: 250 QCWRKDPEERPTF-EYLQAFLE 270
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 149/306 (48%), Gaps = 46/306 (15%)
Query: 101 PSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGV---AAIKVLAS-DSHQG 156
P + P + DI+ F +++G+G FG V KA + G+ AAIK + S
Sbjct: 4 PDPTIYPVLDWNDIK-----FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD 58
Query: 157 EKEFQTEVSLLGRL-HHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIY---------- 205
++F E+ +L +L HH N++NL+G C +G L E+ +G+L + +
Sbjct: 59 HRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPA 118
Query: 206 -----SEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVAD 260
S L+ ++ L A D++ G++YL + IHRDL + NIL+ AK+AD
Sbjct: 119 FAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIAD 175
Query: 261 FGLSKEEVFDGRNSGLKGTYGYIDPAYISTNK-----FTMKSDIFSFGVIIFELITAIHP 315
FGLS+ G+ +K T G + +++ +T SD++S+GV+++E+++
Sbjct: 176 FGLSR-----GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT 230
Query: 316 HQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVT 375
M L G L+K L C+ EV +L R +C + P +RPS ++
Sbjct: 231 PYCGMTCAELYEKLPQGYR--LEKPL--NCD-DEVYDLMR---QCWREKPYERPSFAQIL 282
Query: 376 QALLKI 381
+L ++
Sbjct: 283 VSLNRM 288
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 149/306 (48%), Gaps = 46/306 (15%)
Query: 101 PSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGV---AAIKVLAS-DSHQG 156
P + P + DI+ F +++G+G FG V KA + G+ AAIK + S
Sbjct: 14 PDPTIYPVLDWNDIK-----FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD 68
Query: 157 EKEFQTEVSLLGRL-HHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIY---------- 205
++F E+ +L +L HH N++NL+G C +G L E+ +G+L + +
Sbjct: 69 HRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPA 128
Query: 206 -----SEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVAD 260
S L+ ++ L A D++ G++YL + IHRDL + NIL+ AK+AD
Sbjct: 129 FAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIAD 185
Query: 261 FGLSKEEVFDGRNSGLKGTYGYIDPAYISTNK-----FTMKSDIFSFGVIIFELITAIHP 315
FGLS+ G+ +K T G + +++ +T SD++S+GV+++E+++
Sbjct: 186 FGLSR-----GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT 240
Query: 316 HQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVT 375
M L G L+K L C+ EV +L R +C + P +RPS ++
Sbjct: 241 PYCGMTCAELYEKLPQGYR--LEKPL--NCD-DEVYDLMR---QCWREKPYERPSFAQIL 292
Query: 376 QALLKI 381
+L ++
Sbjct: 293 VSLNRM 298
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 105/205 (51%), Gaps = 16/205 (7%)
Query: 121 FTNILGQGAFGPVYKATMP-----SGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNL 175
F LG+G FG V +G V A+K L + + ++F+ E+ +L L H N+
Sbjct: 17 FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 176 VNLIGYCVDKGK--YMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
V G C G+ LI EF+ GSL + + ++ + LQ I G+EYL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYL--- 133
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYI 288
IHRDL + NIL+++ R K+ DFGL+K +E + G + Y P +
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESL 192
Query: 289 STNKFTMKSDIFSFGVIIFELITAI 313
+ +KF++ SD++SFGV+++EL T I
Sbjct: 193 TESKFSVASDVWSFGVVLYELFTYI 217
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 136/279 (48%), Gaps = 34/279 (12%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEKEFQTEVSLLGRLH 171
++++ + LG G +G VY + A+K L D+ + E EF E +++ +
Sbjct: 28 EMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 86
Query: 172 HRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE-----RLQIALDISHG 226
H NLV L+G C + + ++ E+M G+L + + R N EE L +A IS
Sbjct: 87 HPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL----RECNREEVTAVVLLYMATQISSA 142
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN--SGLKGTYGYID 284
+EYL + IHRDL + N L+ KVADFGLS+ D +G K +
Sbjct: 143 MEYLEKKN---FIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 199
Query: 285 PAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDK---- 339
P ++ N F++KSD+++FGV+++E+ T + P+ + +SQ V ++L+K
Sbjct: 200 PESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI-------DLSQ--VYDLLEKGYRM 250
Query: 340 QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
+ C +V EL R C +P RPS E QA
Sbjct: 251 EQPEGCP-PKVYELMR---ACWKWSPADRPSFAETHQAF 285
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 138/295 (46%), Gaps = 39/295 (13%)
Query: 82 KKSQVSWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSG 141
+K Q WW + + +PR K +++ LG G FG V+
Sbjct: 5 QKPQKPWWEDEWE-----------VPRETLKLVER--------LGAGQFGEVWMGYYNGH 45
Query: 142 GVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLS 201
A+K L S + F E +L+ +L H+ LV L + Y +I E+M NGSL
Sbjct: 46 TKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLV 103
Query: 202 NLIYSEERV-LNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVAD 260
+ + + + L + L +A I+ G+ ++ E IHRDL++ANIL+ + K+AD
Sbjct: 104 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIAD 160
Query: 261 FGLSK--EEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQN 318
FGL++ E+ G K + P I+ FT+KSD++SFG+++ E++T H
Sbjct: 161 FGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT----HGR 216
Query: 319 LMEYVNLASMSQDGVDEILDK--QLVGACNIQEVRELARIGHKCLHKTPRKRPSI 371
+ M+ V + L++ ++V N E EL ++ C + P RP+
Sbjct: 217 ----IPYPGMTNPEVIQNLERGYRMVRPDNCPE--ELYQLMRLCWKERPEDRPTF 265
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 16/205 (7%)
Query: 121 FTNILGQGAFGPVYKATMP-----SGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNL 175
F LG+G FG V +G V A+K L + + ++F+ E+ +L L H N+
Sbjct: 13 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 72
Query: 176 VNLIGYCVDKGK--YMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
V G C G+ LI E++ GSL + + + ++ + LQ I G+EYL
Sbjct: 73 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--- 129
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYI 288
IHRDL + NIL+++ R K+ DFGL+K +E + G + Y P +
Sbjct: 130 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESL 188
Query: 289 STNKFTMKSDIFSFGVIIFELITAI 313
+ +KF++ SD++SFGV+++EL T I
Sbjct: 189 TESKFSVASDVWSFGVVLYELFTYI 213
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 16/205 (7%)
Query: 121 FTNILGQGAFGPVYKATMP-----SGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNL 175
F LG+G FG V +G V A+K L + + ++F+ E+ +L L H N+
Sbjct: 18 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 77
Query: 176 VNLIGYCVDKGK--YMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
V G C G+ LI E++ GSL + + + ++ + LQ I G+EYL
Sbjct: 78 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--- 134
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYI 288
IHRDL + NIL+++ R K+ DFGL+K +E + G + Y P +
Sbjct: 135 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESL 193
Query: 289 STNKFTMKSDIFSFGVIIFELITAI 313
+ +KF++ SD++SFGV+++EL T I
Sbjct: 194 TESKFSVASDVWSFGVVLYELFTYI 218
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 16/205 (7%)
Query: 121 FTNILGQGAFGPVYKATMP-----SGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNL 175
F LG+G FG V +G V A+K L + + ++F+ E+ +L L H N+
Sbjct: 12 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 71
Query: 176 VNLIGYCVDKGK--YMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
V G C G+ LI E++ GSL + + + ++ + LQ I G+EYL
Sbjct: 72 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--- 128
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYI 288
IHRDL + NIL+++ R K+ DFGL+K +E + G + Y P +
Sbjct: 129 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESL 187
Query: 289 STNKFTMKSDIFSFGVIIFELITAI 313
+ +KF++ SD++SFGV+++EL T I
Sbjct: 188 TESKFSVASDVWSFGVVLYELFTYI 212
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 16/205 (7%)
Query: 121 FTNILGQGAFGPVYKATMP-----SGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNL 175
F LG+G FG V +G V A+K L + + ++F+ E+ +L L H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 176 VNLIGYCVDKGK--YMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
V G C G+ LI E++ GSL + + + ++ + LQ I G+EYL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--- 130
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYI 288
IHRDL + NIL+++ R K+ DFGL+K +E + G + Y P +
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESL 189
Query: 289 STNKFTMKSDIFSFGVIIFELITAI 313
+ +KF++ SD++SFGV+++EL T I
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYI 214
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 128/263 (48%), Gaps = 25/263 (9%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVD 184
LGQG FG V+ T AIK L + E F E ++ +L H LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 185 KGKYMLIYEFMSNGSLSNLIYSEE-RVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDL 243
+ Y++I E+MS GSL + + E + L + + +A I+ G+ Y+ +HRDL
Sbjct: 85 EPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 244 KSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
++ANIL+ + KVADFGL++ + + R G K + P +FT+KSD++
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 301 SFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVG---ACNIQEVRELARIG 357
SFG+++ EL T + + Y + + E+LD+ G C + L +
Sbjct: 200 SFGILLTELTT-----KGRVPYPGMVN------REVLDQVERGYRMPCPPECPESLHDLM 248
Query: 358 HKCLHKTPRKRPSIGEVTQALLK 380
+C K P +RP+ E QA L+
Sbjct: 249 CQCWRKDPEERPTF-EYLQAFLE 270
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 138/295 (46%), Gaps = 39/295 (13%)
Query: 82 KKSQVSWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSG 141
+K Q WW + + +PR K +++ LG G FG V+
Sbjct: 3 QKPQKPWWEDEWE-----------VPRETLKLVER--------LGAGQFGEVWMGYYNGH 43
Query: 142 GVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLS 201
A+K L S + F E +L+ +L H+ LV L + Y +I E+M NGSL
Sbjct: 44 TKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLV 101
Query: 202 NLIYSEERV-LNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVAD 260
+ + + + L + L +A I+ G+ ++ E IHRDL++ANIL+ + K+AD
Sbjct: 102 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIAD 158
Query: 261 FGLSK--EEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQN 318
FGL++ E+ G K + P I+ FT+KSD++SFG+++ E++T H
Sbjct: 159 FGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT----HGR 214
Query: 319 LMEYVNLASMSQDGVDEILDK--QLVGACNIQEVRELARIGHKCLHKTPRKRPSI 371
+ M+ V + L++ ++V N E EL ++ C + P RP+
Sbjct: 215 ----IPYPGMTNPEVIQNLERGYRMVRPDNCPE--ELYQLMRLCWKERPEDRPTF 263
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 16/205 (7%)
Query: 121 FTNILGQGAFGPVYKATMP-----SGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNL 175
F LG+G FG V +G V A+K L + + ++F+ E+ +L L H N+
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 176 VNLIGYCVDKGK--YMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
V G C G+ LI E++ GSL + + + ++ + LQ I G+EYL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--- 133
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYI 288
IHRDL + NIL+++ R K+ DFGL+K +E + G + Y P +
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESL 192
Query: 289 STNKFTMKSDIFSFGVIIFELITAI 313
+ +KF++ SD++SFGV+++EL T I
Sbjct: 193 TESKFSVASDVWSFGVVLYELFTYI 217
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 140/293 (47%), Gaps = 32/293 (10%)
Query: 121 FTNILGQGAFGPVYKATMPSGGV------AAIKVLASDSHQGEKE-FQTEVSLLGRL-HH 172
F LG GAFG V +AT G A+K+L S +H EKE +E+ ++ L H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLH- 231
N+VNL+G C G ++I E+ G L N + + RVL + IA + + LH
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169
Query: 232 -----EG----AVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGT--- 279
+G A IHRD+ + N+LL + AK+ DFGL++ ++ + N +KG
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDSNYIVKGNARL 228
Query: 280 -YGYIDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEIL 337
++ P I +T++SD++S+G++++E+ + ++P+ ++ + +DG +
Sbjct: 229 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQ--M 286
Query: 338 DKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQD 390
+ NI + + C P RP+ ++ L + Q ++D
Sbjct: 287 AQPAFAPKNIYSIMQ------ACWALEPTHRPTFQQICSFLQEQAQEDRRERD 333
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 16/205 (7%)
Query: 121 FTNILGQGAFGPVYKATMP-----SGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNL 175
F LG+G FG V +G V A+K L + + ++F+ E+ +L L H N+
Sbjct: 20 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 79
Query: 176 VNLIGYCVDKGK--YMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
V G C G+ LI E++ GSL + + + ++ + LQ I G+EYL
Sbjct: 80 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--- 136
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYI 288
IHRDL + NIL+++ R K+ DFGL+K +E + G + Y P +
Sbjct: 137 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESL 195
Query: 289 STNKFTMKSDIFSFGVIIFELITAI 313
+ +KF++ SD++SFGV+++EL T I
Sbjct: 196 TESKFSVASDVWSFGVVLYELFTYI 220
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 16/205 (7%)
Query: 121 FTNILGQGAFGPVYKATMP-----SGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNL 175
F LG+G FG V +G V A+K L + + ++F+ E+ +L L H N+
Sbjct: 19 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 78
Query: 176 VNLIGYCVDKGK--YMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
V G C G+ LI E++ GSL + + + ++ + LQ I G+EYL
Sbjct: 79 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--- 135
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYI 288
IHRDL + NIL+++ R K+ DFGL+K +E + G + Y P +
Sbjct: 136 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESL 194
Query: 289 STNKFTMKSDIFSFGVIIFELITAI 313
+ +KF++ SD++SFGV+++EL T I
Sbjct: 195 TESKFSVASDVWSFGVVLYELFTYI 219
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 16/205 (7%)
Query: 121 FTNILGQGAFGPVYKATMP-----SGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNL 175
F LG+G FG V +G V A+K L + + ++F+ E+ +L L H N+
Sbjct: 21 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 80
Query: 176 VNLIGYCVDKGK--YMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
V G C G+ LI E++ GSL + + + ++ + LQ I G+EYL
Sbjct: 81 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--- 137
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYI 288
IHRDL + NIL+++ R K+ DFGL+K +E + G + Y P +
Sbjct: 138 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESL 196
Query: 289 STNKFTMKSDIFSFGVIIFELITAI 313
+ +KF++ SD++SFGV+++EL T I
Sbjct: 197 TESKFSVASDVWSFGVVLYELFTYI 221
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 16/205 (7%)
Query: 121 FTNILGQGAFGPVYKATMP-----SGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNL 175
F LG+G FG V +G V A+K L + + ++F+ E+ +L L H N+
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 176 VNLIGYCVDKGK--YMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
V G C G+ LI E++ GSL + + + ++ + LQ I G+EYL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL--- 133
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYI 288
IHRDL + NIL+++ R K+ DFGL+K +E + G + Y P +
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESL 192
Query: 289 STNKFTMKSDIFSFGVIIFELITAI 313
+ +KF++ SD++SFGV+++EL T I
Sbjct: 193 TESKFSVASDVWSFGVVLYELFTYI 217
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 16/205 (7%)
Query: 121 FTNILGQGAFGPVYKATMP-----SGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNL 175
F LG+G FG V +G V A+K L + + ++F+ E+ +L L H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 176 VNLIGYCVDKGK--YMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
V G C G+ LI E++ GSL + + + ++ + LQ I G+EYL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--- 148
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYI 288
IHRDL + NIL+++ R K+ DFGL+K +E + G + Y P +
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESL 207
Query: 289 STNKFTMKSDIFSFGVIIFELITAI 313
+ +KF++ SD++SFGV+++EL T I
Sbjct: 208 TESKFSVASDVWSFGVVLYELFTYI 232
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 16/205 (7%)
Query: 121 FTNILGQGAFGPVYKATMP-----SGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNL 175
F LG+G FG V +G V A+K L + + ++F+ E+ +L L H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 176 VNLIGYCVDKGK--YMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
V G C G+ LI E++ GSL + + + ++ + LQ I G+EYL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--- 130
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYI 288
IHRDL + NIL+++ R K+ DFGL+K +E + G + Y P +
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESL 189
Query: 289 STNKFTMKSDIFSFGVIIFELITAI 313
+ +KF++ SD++SFGV+++EL T I
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYI 214
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 16/205 (7%)
Query: 121 FTNILGQGAFGPVYKATMP-----SGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNL 175
F LG+G FG V +G V A+K L + + ++F+ E+ +L L H N+
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 104
Query: 176 VNLIGYCVDKGK--YMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
V G C G+ LI E++ GSL + + + ++ + LQ I G+EYL
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--- 161
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYI 288
IHRDL + NIL+++ R K+ DFGL+K +E + G + Y P +
Sbjct: 162 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESL 220
Query: 289 STNKFTMKSDIFSFGVIIFELITAI 313
+ +KF++ SD++SFGV+++EL T I
Sbjct: 221 TESKFSVASDVWSFGVVLYELFTYI 245
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 106/205 (51%), Gaps = 16/205 (7%)
Query: 121 FTNILGQGAFGPVYKATMP-----SGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNL 175
F LG+G FG V +G V A+K L + + ++F+ E+ +L L H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 176 VNLIGYCVDKGK--YMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
V G C G+ LI E++ GSL + + + ++ + LQ I G+EYL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--- 148
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYI 288
IHRDL + NIL+++ R K+ DFGL+K +E + G + Y P +
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESL 207
Query: 289 STNKFTMKSDIFSFGVIIFELITAI 313
+ +KF++ SD++SFGV+++EL T I
Sbjct: 208 TESKFSVASDVWSFGVVLYELFTYI 232
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 16/205 (7%)
Query: 121 FTNILGQGAFGPVYKATMP-----SGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNL 175
F LG+G FG V +G V A+K L + + ++F+ E+ +L L H N+
Sbjct: 15 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 74
Query: 176 VNLIGYCVDKGK--YMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
V G C G+ LI E++ GSL + + + ++ + LQ I G+EYL
Sbjct: 75 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--- 131
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYI 288
IHR+L + NIL+++ R K+ DFGL+K +E + + G + Y P +
Sbjct: 132 GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYA-PESL 190
Query: 289 STNKFTMKSDIFSFGVIIFELITAI 313
+ +KF++ SD++SFGV+++EL T I
Sbjct: 191 TESKFSVASDVWSFGVVLYELFTYI 215
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 140/293 (47%), Gaps = 32/293 (10%)
Query: 121 FTNILGQGAFGPVYKATMPSGGV------AAIKVLASDSHQGEKE-FQTEVSLLGRL-HH 172
F LG GAFG V +AT G A+K+L S +H EKE +E+ ++ L H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIA------LDISHG 226
N+VNL+G C G ++I E+ G L N + + RVL + IA D+ H
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHF 169
Query: 227 IEYLHEG----AVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGT--- 279
+ +G A IHRD+ + N+LL + AK+ DFGL++ ++ + N +KG
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDSNYIVKGNARL 228
Query: 280 -YGYIDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEIL 337
++ P I +T++SD++S+G++++E+ + ++P+ ++ + +DG +
Sbjct: 229 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQ--M 286
Query: 338 DKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQD 390
+ NI + + C P RP+ ++ L + Q ++D
Sbjct: 287 AQPAFAPKNIYSIMQ------ACWALEPTHRPTFQQICSFLQEQAQEDRRERD 333
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 127/263 (48%), Gaps = 25/263 (9%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVD 184
LGQG FG V+ T AIK L + E F E ++ +L H LV L +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 185 KGKYMLIYEFMSNGSLSNLIYSEE-RVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDL 243
+ Y ++ E+MS GSL + + E + L + + +A I+ G+ Y+ +HRDL
Sbjct: 78 EPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 133
Query: 244 KSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
++ANIL+ + KVADFGL++ + + R G K + P +FT+KSD++
Sbjct: 134 RAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPEAALYGRFTIKSDVW 192
Query: 301 SFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVG---ACNIQEVRELARIG 357
SFG+++ EL T + + Y + + E+LD+ G C + L +
Sbjct: 193 SFGILLTELTT-----KGRVPYPGMVN------REVLDQVERGYRMPCPPECPESLHDLM 241
Query: 358 HKCLHKTPRKRPSIGEVTQALLK 380
+C K P +RP+ E QA L+
Sbjct: 242 CQCWRKEPEERPTF-EYLQAFLE 263
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 139/296 (46%), Gaps = 41/296 (13%)
Query: 82 KKSQVSWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSG 141
+K Q WW + + +PR K +++ LG G FG V+
Sbjct: 3 QKPQKPWWEDEWE-----------VPRETLKLVER--------LGAGQFGEVWMGYYNGH 43
Query: 142 GVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLS 201
A+K L S + F E +L+ +L H+ LV L + Y +I E+M NGSL
Sbjct: 44 TKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLV 101
Query: 202 NLIYSEERV-LNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVAD 260
+ + + + L + L +A I+ G+ ++ E IHRDL++ANIL+ + K+AD
Sbjct: 102 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIAD 158
Query: 261 FGLSK---EEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQ 317
FGL++ + + R G K + P I+ FT+KSD++SFG+++ E++T H
Sbjct: 159 FGLARLIEDNEYTAR-EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT----HG 213
Query: 318 NLMEYVNLASMSQDGVDEILDK--QLVGACNIQEVRELARIGHKCLHKTPRKRPSI 371
+ M+ V + L++ ++V N E EL ++ C + P RP+
Sbjct: 214 R----IPYPGMTNPEVIQNLERGYRMVRPDNCPE--ELYQLMRLCWKERPEDRPTF 263
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 139/296 (46%), Gaps = 41/296 (13%)
Query: 82 KKSQVSWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSG 141
+K Q WW + + +PR K +++ LG G FG V+
Sbjct: 2 QKPQKPWWEDEWE-----------VPRETLKLVER--------LGAGQFGEVWMGYYNGH 42
Query: 142 GVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLS 201
A+K L S + F E +L+ +L H+ LV L + Y +I E+M NGSL
Sbjct: 43 TKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLV 100
Query: 202 NLIYSEERV-LNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVAD 260
+ + + + L + L +A I+ G+ ++ E IHRDL++ANIL+ + K+AD
Sbjct: 101 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIAD 157
Query: 261 FGLSK---EEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQ 317
FGL++ + + R G K + P I+ FT+KSD++SFG+++ E++T H
Sbjct: 158 FGLARLIEDNEYTAR-EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT----HG 212
Query: 318 NLMEYVNLASMSQDGVDEILDK--QLVGACNIQEVRELARIGHKCLHKTPRKRPSI 371
+ M+ V + L++ ++V N E EL ++ C + P RP+
Sbjct: 213 R----IPYPGMTNPEVIQNLERGYRMVRPDNCPE--ELYQLMRLCWKERPEDRPTF 262
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 133/273 (48%), Gaps = 22/273 (8%)
Query: 120 NFTNILGQGAFGPVYKATMPSGGV----AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRN 174
+F ++G+G FG VY T+ A+K L + GE +F TE ++ H N
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 175 LVNLIGYCV-DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
+++L+G C+ +G +++ +M +G L N I +E ++ + L ++ G++YL
Sbjct: 85 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 141
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSKE----EVFDGRN-SGLKGTYGYIDPAYI 288
A +HRDL + N +LD KVADFGL+++ E + N +G K ++ +
Sbjct: 142 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 201
Query: 289 STNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQ 348
T KFT KSD++SFGV+++EL+T P + ++ G ++L+
Sbjct: 202 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG------RRLLQPEYCP 255
Query: 349 EVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+ L + KC H RPS E+ + I
Sbjct: 256 D--PLYEVMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 133/273 (48%), Gaps = 22/273 (8%)
Query: 120 NFTNILGQGAFGPVYKATMPSGGV----AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRN 174
+F ++G+G FG VY T+ A+K L + GE +F TE ++ H N
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 175 LVNLIGYCV-DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
+++L+G C+ +G +++ +M +G L N I +E ++ + L ++ G++YL
Sbjct: 90 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 146
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSKE----EVFDGRN-SGLKGTYGYIDPAYI 288
A +HRDL + N +LD KVADFGL+++ E + N +G K ++ +
Sbjct: 147 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 206
Query: 289 STNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQ 348
T KFT KSD++SFGV+++EL+T P + ++ G ++L+
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG------RRLLQPEYCP 260
Query: 349 EVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+ L + KC H RPS E+ + I
Sbjct: 261 D--PLYEVMLKCWHPKAEMRPSFSELVSRISAI 291
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 133/273 (48%), Gaps = 22/273 (8%)
Query: 120 NFTNILGQGAFGPVYKATMPSGGV----AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRN 174
+F ++G+G FG VY T+ A+K L + GE +F TE ++ H N
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 175 LVNLIGYCV-DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
+++L+G C+ +G +++ +M +G L N I +E ++ + L ++ G++YL
Sbjct: 88 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 144
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSKE----EVFDGRN-SGLKGTYGYIDPAYI 288
A +HRDL + N +LD KVADFGL+++ E + N +G K ++ +
Sbjct: 145 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 204
Query: 289 STNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQ 348
T KFT KSD++SFGV+++EL+T P + ++ G ++L+
Sbjct: 205 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG------RRLLQPEYCP 258
Query: 349 EVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+ L + KC H RPS E+ + I
Sbjct: 259 D--PLYEVMLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 133/273 (48%), Gaps = 22/273 (8%)
Query: 120 NFTNILGQGAFGPVYKATMPSGGV----AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRN 174
+F ++G+G FG VY T+ A+K L + GE +F TE ++ H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 175 LVNLIGYCV-DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
+++L+G C+ +G +++ +M +G L N I +E ++ + L ++ G++YL
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 147
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSKE----EVFDGRN-SGLKGTYGYIDPAYI 288
A +HRDL + N +LD KVADFGL+++ E + N +G K ++ +
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 207
Query: 289 STNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQ 348
T KFT KSD++SFGV+++EL+T P + ++ G ++L+
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG------RRLLQPEYCP 261
Query: 349 EVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+ L + KC H RPS E+ + I
Sbjct: 262 D--PLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 133/273 (48%), Gaps = 22/273 (8%)
Query: 120 NFTNILGQGAFGPVYKATMPSGGV----AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRN 174
+F ++G+G FG VY T+ A+K L + GE +F TE ++ H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 175 LVNLIGYCV-DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
+++L+G C+ +G +++ +M +G L N I +E ++ + L ++ G++YL
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 148
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSKE----EVFDGRN-SGLKGTYGYIDPAYI 288
A +HRDL + N +LD KVADFGL+++ E + N +G K ++ +
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 208
Query: 289 STNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQ 348
T KFT KSD++SFGV+++EL+T P + ++ G ++L+
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG------RRLLQPEYCP 262
Query: 349 EVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+ L + KC H RPS E+ + I
Sbjct: 263 D--PLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 133/273 (48%), Gaps = 22/273 (8%)
Query: 120 NFTNILGQGAFGPVYKATMPSGGV----AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRN 174
+F ++G+G FG VY T+ A+K L + GE +F TE ++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 175 LVNLIGYCV-DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
+++L+G C+ +G +++ +M +G L N I +E ++ + L ++ G++YL
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 149
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSKE----EVFDGRN-SGLKGTYGYIDPAYI 288
A +HRDL + N +LD KVADFGL+++ E + N +G K ++ +
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 289 STNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQ 348
T KFT KSD++SFGV+++EL+T P + ++ G ++L+
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG------RRLLQPEYCP 263
Query: 349 EVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+ L + KC H RPS E+ + I
Sbjct: 264 D--PLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 125/262 (47%), Gaps = 23/262 (8%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVD 184
LGQG FG V+ T AIK L + E F E ++ +L H LV L V
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYA-VVS 73
Query: 185 KGKYMLIYEFMSNGSLSNLIYSEE-RVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDL 243
+ ++ E+MS GSL + + E + L + + +A I+ G+ Y+ +HRDL
Sbjct: 74 EEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 130
Query: 244 KSANILLDHFMRAKVADFGLSK--EEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFS 301
++ANIL+ + KVADFGL++ E+ G K + P +FT+KSD++S
Sbjct: 131 RAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 190
Query: 302 FGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVG---ACNIQEVRELARIGH 358
FG+++ EL T + + Y + + E+LD+ G C + L +
Sbjct: 191 FGILLTELTT-----KGRVPYPGMVN------REVLDQVERGYRMPCPPECPESLHDLMC 239
Query: 359 KCLHKTPRKRPSIGEVTQALLK 380
+C K P +RP+ E QA L+
Sbjct: 240 QCWRKEPEERPTF-EYLQAFLE 260
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 139/296 (46%), Gaps = 41/296 (13%)
Query: 82 KKSQVSWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSG 141
+K Q WW + + +PR K +++ LG G FG V+
Sbjct: 7 QKPQKPWWEDEWE-----------VPRETLKLVER--------LGAGQFGEVWMGYYNGH 47
Query: 142 GVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLS 201
A+K L S + F E +L+ +L H+ LV L + Y +I E+M NGSL
Sbjct: 48 TKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLV 105
Query: 202 NLIYSEERV-LNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVAD 260
+ + + + L + L +A I+ G+ ++ E IHRDL++ANIL+ + K+AD
Sbjct: 106 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIAD 162
Query: 261 FGLSK---EEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQ 317
FGL++ + + R G K + P I+ FT+KSD++SFG+++ E++T H
Sbjct: 163 FGLARLIEDNEYTAR-EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT----HG 217
Query: 318 NLMEYVNLASMSQDGVDEILDK--QLVGACNIQEVRELARIGHKCLHKTPRKRPSI 371
+ M+ V + L++ ++V N E EL ++ C + P RP+
Sbjct: 218 R----IPYPGMTNPEVIQNLERGYRMVRPDNCPE--ELYQLMRLCWKERPEDRPTF 267
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 133/273 (48%), Gaps = 22/273 (8%)
Query: 120 NFTNILGQGAFGPVYKATMPSGGV----AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRN 174
+F ++G+G FG VY T+ A+K L + GE +F TE ++ H N
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 175 LVNLIGYCV-DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
+++L+G C+ +G +++ +M +G L N I +E ++ + L ++ G++YL
Sbjct: 112 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 168
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSKE----EVFDGRN-SGLKGTYGYIDPAYI 288
A +HRDL + N +LD KVADFGL+++ E + N +G K ++ +
Sbjct: 169 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 228
Query: 289 STNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQ 348
T KFT KSD++SFGV+++EL+T P + ++ G ++L+
Sbjct: 229 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG------RRLLQPEYCP 282
Query: 349 EVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+ L + KC H RPS E+ + I
Sbjct: 283 D--PLYEVMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 133/273 (48%), Gaps = 22/273 (8%)
Query: 120 NFTNILGQGAFGPVYKATMPSGGV----AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRN 174
+F ++G+G FG VY T+ A+K L + GE +F TE ++ H N
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 175 LVNLIGYCV-DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
+++L+G C+ +G +++ +M +G L N I +E ++ + L ++ G++YL
Sbjct: 111 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 167
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSKE----EVFDGRN-SGLKGTYGYIDPAYI 288
A +HRDL + N +LD KVADFGL+++ E + N +G K ++ +
Sbjct: 168 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 227
Query: 289 STNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQ 348
T KFT KSD++SFGV+++EL+T P + ++ G ++L+
Sbjct: 228 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG------RRLLQPEYCP 281
Query: 349 EVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+ L + KC H RPS E+ + I
Sbjct: 282 D--PLYEVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 127/263 (48%), Gaps = 25/263 (9%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVD 184
LGQG FG V+ T AIK L + E F E ++ +L H LV L +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 185 KGKYMLIYEFMSNGSLSNLIYSEE-RVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDL 243
+ Y ++ E+MS GSL + + E + L + + +A I+ G+ Y+ +HRDL
Sbjct: 76 EPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 131
Query: 244 KSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
++ANIL+ + KVADFGL++ + + R G K + P +FT+KSD++
Sbjct: 132 RAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 301 SFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVG---ACNIQEVRELARIG 357
SFG+++ EL T + + Y + + E+LD+ G C + L +
Sbjct: 191 SFGILLTELTT-----KGRVPYPGMVN------REVLDQVERGYRMPCPPECPESLHDLM 239
Query: 358 HKCLHKTPRKRPSIGEVTQALLK 380
+C K P +RP+ E QA L+
Sbjct: 240 CQCWRKDPEERPTF-EYLQAFLE 261
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 133/273 (48%), Gaps = 22/273 (8%)
Query: 120 NFTNILGQGAFGPVYKATMPSGGV----AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRN 174
+F ++G+G FG VY T+ A+K L + GE +F TE ++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 175 LVNLIGYCV-DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
+++L+G C+ +G +++ +M +G L N I +E ++ + L ++ G++YL
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 149
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSKE----EVFDGRN-SGLKGTYGYIDPAYI 288
A +HRDL + N +LD KVADFGL+++ E + N +G K ++ +
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 289 STNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQ 348
T KFT KSD++SFGV+++EL+T P + ++ G ++L+
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG------RRLLQPEYCP 263
Query: 349 EVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+ L + KC H RPS E+ + I
Sbjct: 264 D--PLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 127/263 (48%), Gaps = 25/263 (9%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVD 184
LGQG FG V+ T AIK L + E F E ++ +L H LV L +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 185 KGKYMLIYEFMSNGSLSNLIYSEE-RVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDL 243
+ Y ++ E+MS GSL + + E + L + + +A I+ G+ Y+ +HRDL
Sbjct: 74 EPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 129
Query: 244 KSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
++ANIL+ + KVADFGL++ + + R G K + P +FT+KSD++
Sbjct: 130 RAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPEAALYGRFTIKSDVW 188
Query: 301 SFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVG---ACNIQEVRELARIG 357
SFG+++ EL T + + Y + + E+LD+ G C + L +
Sbjct: 189 SFGILLTELTT-----KGRVPYPGMVN------REVLDQVERGYRMPCPPECPESLHDLM 237
Query: 358 HKCLHKTPRKRPSIGEVTQALLK 380
+C K P +RP+ E QA L+
Sbjct: 238 CQCWRKDPEERPTF-EYLQAFLE 259
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 127/263 (48%), Gaps = 25/263 (9%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVD 184
LGQG FG V+ T AIK L + E F E ++ +L H LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 185 KGKYMLIYEFMSNGSLSNLIYSEE-RVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDL 243
+ Y ++ E+MS GSL + + E + L + + +A I+ G+ Y+ +HRDL
Sbjct: 85 EPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 244 KSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
++ANIL+ + KVADFGL++ + + R G K + P +FT+KSD++
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 301 SFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVG---ACNIQEVRELARIG 357
SFG+++ EL T + + Y + + E+LD+ G C + L +
Sbjct: 200 SFGILLTELTT-----KGRVPYPGMVN------REVLDQVERGYRMPCPPECPESLHDLM 248
Query: 358 HKCLHKTPRKRPSIGEVTQALLK 380
+C K P +RP+ E QA L+
Sbjct: 249 CQCWRKDPEERPTF-EYLQAFLE 270
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 127/263 (48%), Gaps = 25/263 (9%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVD 184
LGQG FG V+ T AIK L + E F E ++ +L H LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 185 KGKYMLIYEFMSNGSLSNLIYSEE-RVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDL 243
+ Y ++ E+MS GSL + + E + L + + +A I+ G+ Y+ +HRDL
Sbjct: 85 EPIY-IVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 244 KSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
++ANIL+ + KVADFGL++ + + R G K + P +FT+KSD++
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 301 SFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVG---ACNIQEVRELARIG 357
SFG+++ EL T + + Y + + E+LD+ G C + L +
Sbjct: 200 SFGILLTELTT-----KGRVPYPGMVN------REVLDQVERGYRMPCPPECPESLHDLM 248
Query: 358 HKCLHKTPRKRPSIGEVTQALLK 380
+C K P +RP+ E QA L+
Sbjct: 249 CQCWRKDPEERPTF-EYLQAFLE 270
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 149/306 (48%), Gaps = 46/306 (15%)
Query: 101 PSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGV---AAIKVLAS-DSHQG 156
P + P + DI+ F +++G+G FG V KA + G+ AAIK + S
Sbjct: 11 PDPTIYPVLDWNDIK-----FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD 65
Query: 157 EKEFQTEVSLLGRL-HHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIY---------- 205
++F E+ +L +L HH N++NL+G C +G L E+ +G+L + +
Sbjct: 66 HRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPA 125
Query: 206 -----SEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVAD 260
S L+ ++ L A D++ G++YL + IHR+L + NIL+ AK+AD
Sbjct: 126 FAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRNLAARNILVGENYVAKIAD 182
Query: 261 FGLSKEEVFDGRNSGLKGTYGYIDPAYISTNK-----FTMKSDIFSFGVIIFELITAIHP 315
FGLS+ G+ +K T G + +++ +T SD++S+GV+++E+++
Sbjct: 183 FGLSR-----GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT 237
Query: 316 HQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVT 375
M L G L+K L C+ EV +L R +C + P +RPS ++
Sbjct: 238 PYCGMTCAELYEKLPQGYR--LEKPL--NCD-DEVYDLMR---QCWREKPYERPSFAQIL 289
Query: 376 QALLKI 381
+L ++
Sbjct: 290 VSLNRM 295
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 133/273 (48%), Gaps = 22/273 (8%)
Query: 120 NFTNILGQGAFGPVYKATMPSGGV----AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRN 174
+F ++G+G FG VY T+ A+K L + GE +F TE ++ H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 175 LVNLIGYCV-DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
+++L+G C+ +G +++ +M +G L N I +E ++ + L ++ G+++L
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 150
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEV---FDG--RNSGLKGTYGYIDPAYI 288
A +HRDL + N +LD KVADFGL+++ + FD +G K ++ +
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 289 STNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQ 348
T KFT KSD++SFGV+++EL+T P + ++ G ++L+
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG------RRLLQPEYCP 264
Query: 349 EVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+ L + KC H RPS E+ + I
Sbjct: 265 D--PLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 126/280 (45%), Gaps = 27/280 (9%)
Query: 124 ILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYC 182
+LG+G FG K T +G V +K L + ++ F EV ++ L H N++ IG
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRD 242
+ I E++ G+L +I S + W +R+ A DI+ G+ YLH +IHRD
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRD 133
Query: 243 LKSANILLDHFMRAKVADFGLSKEEVFD-GRNSGLK--------------GTYGYIDPAY 287
L S N L+ VADFGL++ V + + GL+ G ++ P
Sbjct: 134 LNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEM 193
Query: 288 ISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNI 347
I+ + K D+FSFG+++ E+I ++ + + ++ G LD+ C
Sbjct: 194 INGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRG---FLDRYCPPNCPP 250
Query: 348 QEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLA 387
I +C P KRPS ++ L ++ HLA
Sbjct: 251 S----FFPITVRCCDLDPEKRPSFVKLEHWLETLRM-HLA 285
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 140/300 (46%), Gaps = 58/300 (19%)
Query: 125 LGQGAFGPVYKATMP------SGGVAAIKVLASD-SHQGEKEFQTEVSLLGRLHHRNLVN 177
+G+GAFG V++A P + A+K+L + S + +FQ E +L+ + N+V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYS----------------EERV-------LNWE 214
L+G C L++E+M+ G L+ + S RV L+
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 215 ERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNS 274
E+L IA ++ G+ YL E +HRDL + N L+ M K+ADFGLS+ ++
Sbjct: 175 EQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSR-NIYSADYY 230
Query: 275 GLKGTYG----YIDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHP-----HQNLMEYVN 324
G ++ P I N++T +SD++++GV+++E+ + + P H+ ++ YV
Sbjct: 231 KADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYV- 289
Query: 325 LASMSQDGVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQR 384
+DG IL AC EL + C K P RPS + + L ++ +R
Sbjct: 290 -----RDG--NIL------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 133/273 (48%), Gaps = 22/273 (8%)
Query: 120 NFTNILGQGAFGPVYKATMPSGGV----AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRN 174
+F ++G+G FG VY T+ A+K L + GE +F TE ++ H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 175 LVNLIGYCV-DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
+++L+G C+ +G +++ +M +G L N I +E ++ + L ++ G+++L
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 147
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSKE---EVFDG--RNSGLKGTYGYIDPAYI 288
A +HRDL + N +LD KVADFGL+++ + FD +G K ++ +
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 207
Query: 289 STNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQ 348
T KFT KSD++SFGV+++EL+T P + ++ G ++L+
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG------RRLLQPEYCP 261
Query: 349 EVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+ L + KC H RPS E+ + I
Sbjct: 262 D--PLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 133/274 (48%), Gaps = 24/274 (8%)
Query: 120 NFTNILGQGAFGPVYKATMPSGGV----AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRN 174
+F ++G+G FG VY T+ A+K L + GE +F TE ++ H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 175 LVNLIGYCV-DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
+++L+G C+ +G +++ +M +G L N I +E ++ + L ++ G++YL
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL--- 148
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGR------NSGLKGTYGYIDPAY 287
A +HRDL + N +LD KVADFGL+++ ++D +G K ++
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARD-MYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 288 ISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNI 347
+ T KFT KSD++SFGV+++EL+T P + ++ G ++L+
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG------RRLLQPEYC 261
Query: 348 QEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+ L + KC H RPS E+ + I
Sbjct: 262 PD--PLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 133/273 (48%), Gaps = 22/273 (8%)
Query: 120 NFTNILGQGAFGPVYKATMPSGGV----AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRN 174
+F ++G+G FG VY T+ A+K L + GE +F TE ++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 175 LVNLIGYCV-DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
+++L+G C+ +G +++ +M +G L N I +E ++ + L ++ G+++L
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 149
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSKE---EVFDG--RNSGLKGTYGYIDPAYI 288
A +HRDL + N +LD KVADFGL+++ + FD +G K ++ +
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 289 STNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQ 348
T KFT KSD++SFGV+++EL+T P + ++ G ++L+
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG------RRLLQPEYCP 263
Query: 349 EVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+ L + KC H RPS E+ + I
Sbjct: 264 D--PLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 145/320 (45%), Gaps = 49/320 (15%)
Query: 85 QVSWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVA 144
Q WW + + +PR K +++ LG G FG V+
Sbjct: 9 QKPWWEDEWE-----------VPRETLKLVER--------LGAGQFGEVWMGYYNGHTKV 49
Query: 145 AIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLI 204
A+K L S + F E +L+ +L H+ LV L + Y +I E+M NGSL + +
Sbjct: 50 AVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFL 107
Query: 205 YSEERV-LNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGL 263
+ + L + L +A I+ G+ ++ E IHRDL++ANIL+ + K+ADFGL
Sbjct: 108 KTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGL 164
Query: 264 SK--EEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLME 321
++ E+ G K + P I+ FT+KSD++SFG+++ E++T H
Sbjct: 165 ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT----HGR--- 217
Query: 322 YVNLASMSQDGVDEILDK--QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALL 379
+ M+ V + L++ ++V N E EL ++ C + P RP+ + L
Sbjct: 218 -IPYPGMTNPEVIQNLERGYRMVRPDNCPE--ELYQLMRLCWKERPEDRPTFDYLRSVL- 273
Query: 380 KIKQRHLAKQDTMSFADGEF 399
+D + +G+F
Sbjct: 274 ---------EDFFTATEGQF 284
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 133/273 (48%), Gaps = 22/273 (8%)
Query: 120 NFTNILGQGAFGPVYKATMPSGGV----AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRN 174
+F ++G+G FG VY T+ A+K L + GE +F TE ++ H N
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 175 LVNLIGYCV-DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
+++L+G C+ +G +++ +M +G L N I +E ++ + L ++ G+++L
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 208
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSKE---EVFDG--RNSGLKGTYGYIDPAYI 288
A +HRDL + N +LD KVADFGL+++ + FD +G K ++ +
Sbjct: 209 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 268
Query: 289 STNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQ 348
T KFT KSD++SFGV+++EL+T P + ++ G ++L+
Sbjct: 269 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG------RRLLQPEYCP 322
Query: 349 EVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+ L + KC H RPS E+ + I
Sbjct: 323 D--PLYEVMLKCWHPKAEMRPSFSELVSRISAI 353
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 133/273 (48%), Gaps = 22/273 (8%)
Query: 120 NFTNILGQGAFGPVYKATMPSGGV----AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRN 174
+F ++G+G FG VY T+ A+K L + GE +F TE ++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 175 LVNLIGYCV-DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
+++L+G C+ +G +++ +M +G L N I +E ++ + L ++ G+++L
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 149
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSKE---EVFDG--RNSGLKGTYGYIDPAYI 288
A +HRDL + N +LD KVADFGL+++ + FD +G K ++ +
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 289 STNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQ 348
T KFT KSD++SFGV+++EL+T P + ++ G ++L+
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG------RRLLQPEYCP 263
Query: 349 EVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+ L + KC H RPS E+ + I
Sbjct: 264 D--PLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 133/273 (48%), Gaps = 22/273 (8%)
Query: 120 NFTNILGQGAFGPVYKATMPSGGV----AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRN 174
+F ++G+G FG VY T+ A+K L + GE +F TE ++ H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 175 LVNLIGYCV-DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
+++L+G C+ +G +++ +M +G L N I +E ++ + L ++ G+++L
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 150
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSKE---EVFDG--RNSGLKGTYGYIDPAYI 288
A +HRDL + N +LD KVADFGL+++ + FD +G K ++ +
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 289 STNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQ 348
T KFT KSD++SFGV+++EL+T P + ++ G ++L+
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG------RRLLQPEYCP 264
Query: 349 EVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+ L + KC H RPS E+ + I
Sbjct: 265 D--PLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 7/215 (3%)
Query: 99 SAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEK 158
+APS +G+ Y +I F LG G FG V AIK++ S E
Sbjct: 7 NAPSTAGLG-YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSED 64
Query: 159 EFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQ 218
EF E ++ L H LV L G C + +I E+M+NG L N + ++ L+
Sbjct: 65 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE 124
Query: 219 IALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNS--GL 276
+ D+ +EYL +HRDL + N L++ KV+DFGLS+ + D S G
Sbjct: 125 MCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGS 181
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
K + P + +KF+ KSDI++FGV+++E+ +
Sbjct: 182 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 127/263 (48%), Gaps = 25/263 (9%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVD 184
LGQG FG V+ T AIK L + E F E ++ ++ H LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 185 KGKYMLIYEFMSNGSLSNLIYSEE-RVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDL 243
+ Y ++ E+MS GSL + + E + L + + +A I+ G+ Y+ +HRDL
Sbjct: 85 EPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 244 KSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
++ANIL+ + KVADFGL++ + + R G K + P +FT+KSD++
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 301 SFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVG---ACNIQEVRELARIG 357
SFG+++ EL T + + Y + + E+LD+ G C + L +
Sbjct: 200 SFGILLTELTT-----KGRVPYPGMVN------REVLDQVERGYRMPCPPECPESLHDLM 248
Query: 358 HKCLHKTPRKRPSIGEVTQALLK 380
+C K P +RP+ E QA L+
Sbjct: 249 CQCWRKDPEERPTF-EYLQAFLE 270
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 133/273 (48%), Gaps = 22/273 (8%)
Query: 120 NFTNILGQGAFGPVYKATMPSGGV----AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRN 174
+F ++G+G FG VY T+ A+K L + GE +F TE ++ H N
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 175 LVNLIGYCV-DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
+++L+G C+ +G +++ +M +G L N I +E ++ + L ++ G+++L
Sbjct: 98 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL--- 154
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSKE---EVFDG--RNSGLKGTYGYIDPAYI 288
A +HRDL + N +LD KVADFGL+++ + FD +G K ++ +
Sbjct: 155 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 214
Query: 289 STNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQ 348
T KFT KSD++SFGV+++EL+T P + ++ G ++L+
Sbjct: 215 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG------RRLLQPEYCP 268
Query: 349 EVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+ L + KC H RPS E+ + I
Sbjct: 269 D--PLYEVMLKCWHPKAEMRPSFSELVSRISAI 299
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 136/292 (46%), Gaps = 39/292 (13%)
Query: 85 QVSWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVA 144
Q WW + + +PR K +++ LG G FG V+
Sbjct: 2 QKPWWEDEWE-----------VPRETLKLVER--------LGAGQFGEVWMGYYNGHTKV 42
Query: 145 AIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLI 204
A+K L S + F E +L+ +L H+ LV L + Y +I E+M NGSL + +
Sbjct: 43 AVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFL 100
Query: 205 YSEERV-LNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGL 263
+ + L + L +A I+ G+ ++ E IHRDL++ANIL+ + K+ADFGL
Sbjct: 101 KTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGL 157
Query: 264 SK--EEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLME 321
++ E+ G K + P I+ FT+KSD++SFG+++ E++T H
Sbjct: 158 ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT----HGR--- 210
Query: 322 YVNLASMSQDGVDEILDK--QLVGACNIQEVRELARIGHKCLHKTPRKRPSI 371
+ M+ V + L++ ++V N E EL ++ C + P RP+
Sbjct: 211 -IPYPGMTNPEVIQNLERGYRMVRPDNCPE--ELYQLMRLCWKERPEDRPTF 259
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 128/264 (48%), Gaps = 20/264 (7%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHH 172
++ + T LG G FG V+ A+K L S + F E +L+ +L H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 67
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERV-LNWEERLQIALDISHGIEYLH 231
+ LV L + Y +I E+M NGSL + + + + L + L +A I+ G+ ++
Sbjct: 68 QRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 232 EGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK--EEVFDGRNSGLKGTYGYIDPAYIS 289
E IHRDL++ANIL+ + K+ADFGL++ E+ G K + P I+
Sbjct: 127 ERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN 183
Query: 290 TNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDK--QLVGACNI 347
FT+KSD++SFG+++ E++T H + M+ V + L++ ++V N
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVT----HGR----IPYPGMTNPEVIQNLERGYRMVRPDNC 235
Query: 348 QEVRELARIGHKCLHKTPRKRPSI 371
E EL ++ C + P RP+
Sbjct: 236 PE--ELYQLMRLCWKERPEDRPTF 257
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 126/263 (47%), Gaps = 25/263 (9%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVD 184
LGQG FG V+ T AIK L + E F E ++ +L H LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 185 KGKYMLIYEFMSNGSLSNLIYSEE-RVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDL 243
+ Y ++ E+MS GSL + + E + L + + +A I+ G+ Y+ +HRDL
Sbjct: 85 EPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 244 KSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
+ANIL+ + KVADFGL++ + + R G K + P +FT+KSD++
Sbjct: 141 AAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 301 SFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVG---ACNIQEVRELARIG 357
SFG+++ EL T + + Y + + E+LD+ G C + L +
Sbjct: 200 SFGILLTELTT-----KGRVPYPGMVN------REVLDQVERGYRMPCPPECPESLHDLM 248
Query: 358 HKCLHKTPRKRPSIGEVTQALLK 380
+C K P +RP+ E QA L+
Sbjct: 249 CQCWRKDPEERPTF-EYLQAFLE 270
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 130/271 (47%), Gaps = 20/271 (7%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHH 172
++ + T LG G FG V+ A+K L S + F E +L+ +L H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 67
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERV-LNWEERLQIALDISHGIEYLH 231
+ LV L + Y +I E+M NGSL + + + + L + L +A I+ G+ ++
Sbjct: 68 QRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 232 EGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK--EEVFDGRNSGLKGTYGYIDPAYIS 289
E IHRDL++ANIL+ + K+ADFGL++ E+ G K + P I+
Sbjct: 127 ERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAIN 183
Query: 290 TNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDK--QLVGACNI 347
FT+KSD++SFG+++ E++T H + M+ V + L++ ++V N
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVT----HGR----IPYPGMTNPEVIQNLERGYRMVRPDNC 235
Query: 348 QEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
E EL ++ C + P RP+ + L
Sbjct: 236 PE--ELYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 126/263 (47%), Gaps = 25/263 (9%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVD 184
LGQG FG V+ T AIK L + E F E ++ +L H LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 185 KGKYMLIYEFMSNGSLSNLIYSEE-RVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDL 243
+ Y ++ E+MS G L + + E + L + + +A I+ G+ Y+ +HRDL
Sbjct: 85 EPIY-IVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 244 KSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
++ANIL+ + KVADFGL++ + + R G K + P +FT+KSD++
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 301 SFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVG---ACNIQEVRELARIG 357
SFG+++ EL T + + Y + + E+LD+ G C + L +
Sbjct: 200 SFGILLTELTT-----KGRVPYPGMVN------REVLDQVERGYRMPCPPECPESLHDLM 248
Query: 358 HKCLHKTPRKRPSIGEVTQALLK 380
+C K P +RP+ E QA L+
Sbjct: 249 CQCWRKDPEERPTF-EYLQAFLE 270
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 136/292 (46%), Gaps = 39/292 (13%)
Query: 85 QVSWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVA 144
Q WW + + +PR K +++ LG G FG V+
Sbjct: 1 QKPWWEDEWE-----------VPRETLKLVER--------LGAGQFGEVWMGYYNGHTKV 41
Query: 145 AIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLI 204
A+K L S + F E +L+ +L H+ LV L + Y +I E+M NGSL + +
Sbjct: 42 AVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFL 99
Query: 205 YSEERV-LNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGL 263
+ + L + L +A I+ G+ ++ E IHRDL++ANIL+ + K+ADFGL
Sbjct: 100 KTPSGIKLTINKLLDMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGL 156
Query: 264 SK--EEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLME 321
++ E+ G K + P I+ FT+KSD++SFG+++ E++T H
Sbjct: 157 ARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT----HGR--- 209
Query: 322 YVNLASMSQDGVDEILDK--QLVGACNIQEVRELARIGHKCLHKTPRKRPSI 371
+ M+ V + L++ ++V N E EL ++ C + P RP+
Sbjct: 210 -IPYPGMTNPEVIQNLERGYRMVRPDNCPE--ELYQLMRLCWKERPEDRPTF 258
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 139/292 (47%), Gaps = 34/292 (11%)
Query: 121 FTNILGQGAFGPVYKATMPSGGV------AAIKVLASDSHQGEKE-FQTEVSLLGRL-HH 172
F LG GAFG V +AT G A+K+L S +H EKE +E+ ++ L H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIY---------SEERVLNWEERLQIALDI 223
N+VNL+G C G ++I E+ G L N + + R L + L + +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 169
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGT---- 279
+ G+ +L A IHRD+ + N+LL + AK+ DFGL++ ++ + N +KG
Sbjct: 170 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDSNYIVKGNARLP 225
Query: 280 YGYIDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILD 338
++ P I +T++SD++S+G++++E+ + ++P+ ++ + +DG +
Sbjct: 226 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQ--MA 283
Query: 339 KQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQD 390
+ NI + + C P RP+ ++ L + Q ++D
Sbjct: 284 QPAFAPKNIYSIMQ------ACWALEPTHRPTFQQICSFLQEQAQEDRRERD 329
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 7/215 (3%)
Query: 99 SAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEK 158
+APS +G+ Y +I F LG G FG V AIK++ S E
Sbjct: 7 NAPSTAGLG-YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSED 64
Query: 159 EFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQ 218
EF E ++ L H LV L G C + +I E+M+NG L N + ++ L+
Sbjct: 65 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE 124
Query: 219 IALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNS--GL 276
+ D+ +EYL +HRDL + N L++ KV+DFGLS+ + D S G
Sbjct: 125 MCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS 181
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
K + P + +KF+ KSDI++FGV+++E+ +
Sbjct: 182 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 126/263 (47%), Gaps = 25/263 (9%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVD 184
LGQG FG V+ T AIK L + E F E ++ +L H LV L +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 185 KGKYMLIYEFMSNGSLSNLIYSEE-RVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDL 243
+ Y ++ E+MS G L + + E + L + + +A I+ G+ Y+ +HRDL
Sbjct: 85 EPIY-IVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDL 140
Query: 244 KSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
++ANIL+ + KVADFGL++ + + R G K + P +FT+KSD++
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 301 SFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVG---ACNIQEVRELARIG 357
SFG+++ EL T + + Y + + E+LD+ G C + L +
Sbjct: 200 SFGILLTELTT-----KGRVPYPGMVN------REVLDQVERGYRMPCPPECPESLHDLM 248
Query: 358 HKCLHKTPRKRPSIGEVTQALLK 380
+C K P +RP+ E QA L+
Sbjct: 249 CQCWRKDPEERPTF-EYLQAFLE 270
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 126/262 (48%), Gaps = 23/262 (8%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVD 184
LGQG FG V+ T AIK L + E F E ++ +L H LV L +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 185 KGKYMLIYEFMSNGSLSNLIYSEE-RVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDL 243
+ Y ++ E+M+ GSL + + E + L + + ++ I+ G+ Y+ +HRDL
Sbjct: 82 EPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY---VHRDL 137
Query: 244 KSANILLDHFMRAKVADFGLSK--EEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFS 301
++ANIL+ + KVADFGL++ E+ G K + P +FT+KSD++S
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 197
Query: 302 FGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVG---ACNIQEVRELARIGH 358
FG+++ EL T + + Y + + E+LD+ G C + L +
Sbjct: 198 FGILLTELTT-----KGRVPYPGMVN------REVLDQVERGYRMPCPPECPESLHDLMC 246
Query: 359 KCLHKTPRKRPSIGEVTQALLK 380
+C K P +RP+ E QA L+
Sbjct: 247 QCWRKEPEERPTF-EYLQAFLE 267
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 137/275 (49%), Gaps = 25/275 (9%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVL--ASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYC 182
+G G+FG VYK G A+K+L + + Q + F+ EV +L + H N++ +GY
Sbjct: 36 IGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRD 242
K + ++ ++ SL + ++ E + + IA + G++YLH ++ IHRD
Sbjct: 94 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI---IHRD 149
Query: 243 LKSANILLDHFMRAKVADFGLSKEEVFDGRNSG------LKGTYGYIDPAYI---STNKF 293
LKS NI L + K+ DFGL+ E+ R SG L G+ ++ P I N +
Sbjct: 150 LKSNNIFLHEDLTVKIGDFGLATEK---SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 206
Query: 294 TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
+ +SD+++FG++++EL+T P+ N+ + M G ++ C + +
Sbjct: 207 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP----KAM 262
Query: 354 ARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAK 388
R+ +CL K +RP ++ A +++ R L K
Sbjct: 263 KRLMAECLKKKRDERPLFPQIL-ASIELLARSLPK 296
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 137/275 (49%), Gaps = 25/275 (9%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVL--ASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYC 182
+G G+FG VYK G A+K+L + + Q + F+ EV +L + H N++ +GY
Sbjct: 16 IGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRD 242
K + ++ ++ SL + ++ E + + IA + G++YLH ++ IHRD
Sbjct: 74 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI---IHRD 129
Query: 243 LKSANILLDHFMRAKVADFGLSKEEVFDGRNSG------LKGTYGYIDPAYI---STNKF 293
LKS NI L + K+ DFGL+ E+ R SG L G+ ++ P I N +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATEK---SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 294 TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
+ +SD+++FG++++EL+T P+ N+ + M G ++ C + +
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP----KAM 242
Query: 354 ARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAK 388
R+ +CL K +RP ++ A +++ R L K
Sbjct: 243 KRLMAECLKKKRDERPLFPQIL-ASIELLARSLPK 276
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 131/272 (48%), Gaps = 22/272 (8%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHH 172
++ + T LG G FG V+ A+K L S + F E +L+ +L H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 67
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERV-LNWEERLQIALDISHGIEYLH 231
+ LV L + Y +I E+M NGSL + + + + L + L +A I+ G+ ++
Sbjct: 68 QRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 232 EGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYI 288
E IHRDL++ANIL+ + K+ADFGL++ + + R G K + P I
Sbjct: 127 ERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR-EGAKFPIKWTAPEAI 182
Query: 289 STNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDK--QLVGACN 346
+ FT+KSD++SFG+++ E++T H + M+ V + L++ ++V N
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVT----HGR----IPYPGMTNPEVIQNLERGYRMVRPDN 234
Query: 347 IQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
E EL ++ C + P RP+ + L
Sbjct: 235 CPE--ELYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 127/263 (48%), Gaps = 25/263 (9%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVD 184
LGQG FG V+ T AIK L + E F E ++ +L H LV L +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 185 KGKYMLIYEFMSNGSLSNLIYSEE-RVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDL 243
+ Y ++ E+M+ GSL + + E + L + + ++ I+ G+ Y+ +HRDL
Sbjct: 82 EPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY---VHRDL 137
Query: 244 KSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
++ANIL+ + KVADFGL++ + + R G K + P +FT+KSD++
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 301 SFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVG---ACNIQEVRELARIG 357
SFG+++ EL T + + Y + + E+LD+ G C + L +
Sbjct: 197 SFGILLTELTT-----KGRVPYPGMVN------REVLDQVERGYRMPCPPECPESLHDLM 245
Query: 358 HKCLHKTPRKRPSIGEVTQALLK 380
+C K P +RP+ E QA L+
Sbjct: 246 CQCWRKEPEERPTF-EYLQAFLE 267
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 137/275 (49%), Gaps = 25/275 (9%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVL--ASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYC 182
+G G+FG VYK G A+K+L + + Q + F+ EV +L + H N++ +GY
Sbjct: 44 IGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRD 242
K + ++ ++ SL + ++ E + + IA + G++YLH ++ IHRD
Sbjct: 102 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI---IHRD 157
Query: 243 LKSANILLDHFMRAKVADFGLSKEEVFDGRNSG------LKGTYGYIDPAYI---STNKF 293
LKS NI L + K+ DFGL+ E+ R SG L G+ ++ P I N +
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATEK---SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 294 TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
+ +SD+++FG++++EL+T P+ N+ + M G ++ C + +
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP----KAM 270
Query: 354 ARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAK 388
R+ +CL K +RP ++ A +++ R L K
Sbjct: 271 KRLMAECLKKKRDERPLFPQIL-ASIELLARSLPK 304
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 131/272 (48%), Gaps = 22/272 (8%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHH 172
++ + T LG G FG V+ A+K L S + F E +L+ +L H
Sbjct: 4 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 62
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERV-LNWEERLQIALDISHGIEYLH 231
+ LV L + Y +I E+M NGSL + + + + L + L +A I+ G+ ++
Sbjct: 63 QRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 121
Query: 232 EGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYI 288
E IHRDL++ANIL+ + K+ADFGL++ + + R G K + P I
Sbjct: 122 ERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR-EGAKFPIKWTAPEAI 177
Query: 289 STNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDK--QLVGACN 346
+ FT+KSD++SFG+++ E++T H + M+ V + L++ ++V N
Sbjct: 178 NYGTFTIKSDVWSFGILLTEIVT----HGR----IPYPGMTNPEVIQNLERGYRMVRPDN 229
Query: 347 IQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
E EL ++ C + P RP+ + L
Sbjct: 230 CPE--ELYQLMRLCWKERPEDRPTFDYLRSVL 259
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 109/189 (57%), Gaps = 10/189 (5%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVD 184
+G+G FG V G A+K + +D+ + F E S++ +L H NLV L+G V+
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 185 -KGKYMLIYEFMSNGSLSNLIYSEER-VLNWEERLQIALDISHGIEYLHEGAVPPVIHRD 242
KG ++ E+M+ GSL + + S R VL + L+ +LD+ +EYL EG +HRD
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL-EGN--NFVHRD 127
Query: 243 LKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFSF 302
L + N+L+ AKV+DFGL+K E +++G K + P + KF+ KSD++SF
Sbjct: 128 LAARNVLVSEDNVAKVSDFGLTK-EASSTQDTG-KLPVKWTAPEALREKKFSTKSDVWSF 185
Query: 303 GVIIFELIT 311
G++++E+ +
Sbjct: 186 GILLWEIYS 194
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 134/280 (47%), Gaps = 34/280 (12%)
Query: 121 FTNILGQGAFGPVYKATMPSGGV------AAIKVLASDSHQGEKE-FQTEVSLLGRL-HH 172
F LG GAFG V +AT G A+K+L S +H EKE +E+ ++ L H
Sbjct: 42 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 101
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIY---------SEERVLNWEERLQIALDI 223
N+VNL+G C G ++I E+ G L N + + R L + L + +
Sbjct: 102 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 161
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGT---- 279
+ G+ +L A IHRD+ + N+LL + AK+ DFGL++ ++ + N +KG
Sbjct: 162 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDSNYIVKGNARLP 217
Query: 280 YGYIDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILD 338
++ P I +T++SD++S+G++++E+ + ++P+ ++ + +DG +
Sbjct: 218 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQ--MA 275
Query: 339 KQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
+ NI + + C P RP+ ++ L
Sbjct: 276 QPAFAPKNIYSIMQ------ACWALEPTHRPTFQQICSFL 309
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 122/268 (45%), Gaps = 20/268 (7%)
Query: 125 LGQGAFGPVYKATMPSGG--VAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYC 182
+G+G FG V+ + + VA + + +F E +L + H N+V LIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRD 242
K ++ E + G + +E L + LQ+ D + G+EYL IHRD
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRD 238
Query: 243 LKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKG----TYGYIDPAYISTNKFTMKSD 298
L + N L+ K++DFG+S+EE DG + G + P ++ +++ +SD
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEA-DGVXAASGGLRQVPVKWTAPEALNYGRYSSESD 297
Query: 299 IFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVRELARIG 357
++SFG++++E + P+ NL S E ++K C + R+
Sbjct: 298 VWSFGILLWETFSLGASPYPNL---------SNQQTREFVEKGGRLPCPELCPDAVFRLM 348
Query: 358 HKCLHKTPRKRPSIGEVTQALLKIKQRH 385
+C P +RPS + Q L I++RH
Sbjct: 349 EQCWAYEPGQRPSFSTIYQELQSIRKRH 376
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 109/189 (57%), Gaps = 10/189 (5%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVD 184
+G+G FG V G A+K + +D+ + F E S++ +L H NLV L+G V+
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 185 -KGKYMLIYEFMSNGSLSNLIYSEER-VLNWEERLQIALDISHGIEYLHEGAVPPVIHRD 242
KG ++ E+M+ GSL + + S R VL + L+ +LD+ +EYL EG +HRD
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL-EGN--NFVHRD 314
Query: 243 LKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFSF 302
L + N+L+ AKV+DFGL+K E +++G K + P + KF+ KSD++SF
Sbjct: 315 LAARNVLVSEDNVAKVSDFGLTK-EASSTQDTG-KLPVKWTAPEALREKKFSTKSDVWSF 372
Query: 303 GVIIFELIT 311
G++++E+ +
Sbjct: 373 GILLWEIYS 381
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 124/268 (46%), Gaps = 20/268 (7%)
Query: 125 LGQGAFGPVYKATMPSGG--VAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYC 182
+G+G FG V+ + + VA + + +F E +L + H N+V LIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRD 242
K ++ E + G + +E L + LQ+ D + G+EYL IHRD
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRD 238
Query: 243 LKSANILLDHFMRAKVADFGLSKEEVFDG---RNSGLKGT-YGYIDPAYISTNKFTMKSD 298
L + N L+ K++DFG+S+EE DG + GL+ + P ++ +++ +SD
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEA-DGVYAASGGLRQVPVKWTAPEALNYGRYSSESD 297
Query: 299 IFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVRELARIG 357
++SFG++++E + P+ NL S E ++K C + R+
Sbjct: 298 VWSFGILLWETFSLGASPYPNL---------SNQQTREFVEKGGRLPCPELCPDAVFRLM 348
Query: 358 HKCLHKTPRKRPSIGEVTQALLKIKQRH 385
+C P +RPS + Q L I++RH
Sbjct: 349 EQCWAYEPGQRPSFSTIYQELQSIRKRH 376
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 109/189 (57%), Gaps = 10/189 (5%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVD 184
+G+G FG V G A+K + +D+ + F E S++ +L H NLV L+G V+
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 185 -KGKYMLIYEFMSNGSLSNLIYSEER-VLNWEERLQIALDISHGIEYLHEGAVPPVIHRD 242
KG ++ E+M+ GSL + + S R VL + L+ +LD+ +EYL EG +HRD
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL-EGN--NFVHRD 142
Query: 243 LKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFSF 302
L + N+L+ AKV+DFGL+K E +++G K + P + KF+ KSD++SF
Sbjct: 143 LAARNVLVSEDNVAKVSDFGLTK-EASSTQDTG-KLPVKWTAPEALREKKFSTKSDVWSF 200
Query: 303 GVIIFELIT 311
G++++E+ +
Sbjct: 201 GILLWEIYS 209
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 137/291 (47%), Gaps = 27/291 (9%)
Query: 99 SAPSASGIPRYAYK----DIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSH 154
S P S P+ ++ +I + + LG G FG V+ AT A+K + S
Sbjct: 166 SVPCMSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM 225
Query: 155 QGEKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWE 214
E F E +++ L H LV L V K +I EFM+ GSL + + S+E
Sbjct: 226 SVEA-FLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL 283
Query: 215 ERL-QIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFD 270
+L + I+ G+ ++ + IHRDL++ANIL+ + K+ADFGL++ + +
Sbjct: 284 PKLIDFSAQIAEGMAFIEQRNY---IHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 340
Query: 271 GRNSGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQ 330
R G K + P I+ FT+KSD++SFG+++ E++T + MS
Sbjct: 341 ARE-GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR--------IPYPGMSN 391
Query: 331 DGVDEILDK--QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALL 379
V L++ ++ N E EL I +C P +RP+ E Q++L
Sbjct: 392 PEVIRALERGYRMPRPENCPE--ELYNIMMRCWKNRPEERPTF-EYIQSVL 439
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 134/288 (46%), Gaps = 31/288 (10%)
Query: 99 SAPSASGIPRYAYK----DIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSH 154
S P S P+ ++ +I + + LG G FG V+ AT A+K + S
Sbjct: 160 SVPCMSSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM 219
Query: 155 QGEKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWE 214
E F E +++ L H LV L V K +I EFM+ GSL + + S+E
Sbjct: 220 SVEA-FLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL 277
Query: 215 ERL-QIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN 273
+L + I+ G+ ++ + IHRDL++ANIL+ + K+ADFGL++
Sbjct: 278 PKLIDFSAQIAEGMAFIEQRNY---IHRDLRAANILVSASLVCKIADFGLAR-------- 326
Query: 274 SGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGV 333
G K + P I+ FT+KSD++SFG+++ E++T + MS V
Sbjct: 327 VGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR--------IPYPGMSNPEV 378
Query: 334 DEILDK--QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALL 379
L++ ++ N E EL I +C P +RP+ E Q++L
Sbjct: 379 IRALERGYRMPRPENCPE--ELYNIMMRCWKNRPEERPTF-EYIQSVL 423
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 125/271 (46%), Gaps = 17/271 (6%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHH 172
+I + + LG G FG V+ T AIK L + E F E ++ +L H
Sbjct: 5 EIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPES-FLEEAQIMKKLKH 63
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEE-RVLNWEERLQIALDISHGIEYLH 231
LV L ++ Y ++ E+M+ GSL + + E R L + +A ++ G+ Y+
Sbjct: 64 DKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE 122
Query: 232 EGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK--EEVFDGRNSGLKGTYGYIDPAYIS 289
IHRDL+SANIL+ + + K+ADFGL++ E+ G K + P
Sbjct: 123 RMNY---IHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAAL 179
Query: 290 TNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE 349
+FT+KSD++SFG+++ EL+T V M+ V E +++ C
Sbjct: 180 YGRFTIKSDVWSFGILLTELVTKGR--------VPYPGMNNREVLEQVERGYRMPCPQDC 231
Query: 350 VRELARIGHKCLHKTPRKRPSIGEVTQALLK 380
L + C K P +RP+ E Q+ L+
Sbjct: 232 PISLHELMIHCWKKDPEERPTF-EYLQSFLE 261
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 127/264 (48%), Gaps = 20/264 (7%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHH 172
++ + T LG G G V+ A+K L S + F E +L+ +L H
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 67
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERV-LNWEERLQIALDISHGIEYLH 231
+ LV L + Y +I E+M NGSL + + + + L + L +A I+ G+ ++
Sbjct: 68 QRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 232 EGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK--EEVFDGRNSGLKGTYGYIDPAYIS 289
E IHRDL++ANIL+ + K+ADFGL++ E+ G K + P I+
Sbjct: 127 ERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAIN 183
Query: 290 TNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDK--QLVGACNI 347
FT+KSD++SFG+++ E++T H + M+ V + L++ ++V N
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVT----HGR----IPYPGMTNPEVIQNLERGYRMVRPDNC 235
Query: 348 QEVRELARIGHKCLHKTPRKRPSI 371
E EL ++ C + P RP+
Sbjct: 236 PE--ELYQLMRLCWKERPEDRPTF 257
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 141/298 (47%), Gaps = 40/298 (13%)
Query: 121 FTNILGQGAFGPVYKATMPSGGV------AAIKVLASDSHQGEKE-FQTEVSLLGRL-HH 172
F LG GAFG V +AT G A+K+L S +H EKE +E+ ++ L H
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLI---------YSEERVLNWEERL------ 217
N+VNL+G C G ++I E+ G L N + YS N EE+L
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 218 QIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK 277
+ ++ G+ +L A IHRD+ + N+LL + AK+ DFGL++ ++ + N +K
Sbjct: 170 HFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDSNYIVK 225
Query: 278 GT----YGYIDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDG 332
G ++ P I +T++SD++S+G++++E+ + ++P+ ++ + +DG
Sbjct: 226 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDG 285
Query: 333 VDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQD 390
+ + NI + + C P RP+ ++ L + Q ++D
Sbjct: 286 YQ--MAQPAFAPKNIYSIMQ------ACWALEPTHRPTFQQICSFLQEQAQEDRRERD 335
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 139/300 (46%), Gaps = 27/300 (9%)
Query: 95 DRFTSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGG----VAAIKVLA 150
D FT + +A K+I + ++G G FG V + G AIK L
Sbjct: 12 DPFTFEDPNEAVREFA-KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLK 70
Query: 151 SD-SHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEER 209
S + + ++F +E S++G+ H N+++L G M+I EFM NGSL + + +
Sbjct: 71 SGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG 130
Query: 210 VLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVF 269
+ + + I+ G++YL + +HRDL + NIL++ + KV+DFGLS+
Sbjct: 131 QFTVIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLED 187
Query: 270 DGRNSGLKGTYG------YIDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEY 322
D + G + P I KFT SD++S+G++++E+++ P+ ++
Sbjct: 188 DTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM--- 244
Query: 323 VNLASMSQDGVDEI-LDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+QD ++ I D +L + L ++ C K RP G++ L K+
Sbjct: 245 -----TNQDVINAIEQDYRLPPPMDCPSA--LHQLMLDCWQKDRNHRPKFGQIVNTLDKM 297
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 135/275 (49%), Gaps = 25/275 (9%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVL--ASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYC 182
+G G+FG VYK G A+K+L + + Q + F+ EV +L + H N++ +GY
Sbjct: 21 IGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRD 242
K + ++ ++ SL + ++ E + + IA + G++YLH ++ IHRD
Sbjct: 79 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI---IHRD 134
Query: 243 LKSANILLDHFMRAKVADFGLSKEEVFDGRNSG------LKGTYGYIDPAYI---STNKF 293
LKS NI L + K+ DFGL+ R SG L G+ ++ P I N +
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLA---TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 294 TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
+ +SD+++FG++++EL+T P+ N+ + M G ++ C + +
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP----KAM 247
Query: 354 ARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAK 388
R+ +CL K +RP ++ A +++ R L K
Sbjct: 248 KRLMAECLKKKRDERPLFPQIL-ASIELLARSLPK 281
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 134/279 (48%), Gaps = 24/279 (8%)
Query: 111 YKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVL--ASDSHQGEKEFQTEVSLLG 168
Y +I+ + + +G G+FG VYK G A+K+L + + + F+ EV++L
Sbjct: 30 YWEIEASEVMLSTRIGSGSFGTVYKGKW--HGDVAVKILKVVDPTPEQFQAFRNEVAVLR 87
Query: 169 RLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIE 228
+ H N++ +GY + K ++ ++ SL ++ +E + + IA + G++
Sbjct: 88 KTRHVNILLFMGY-MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMD 146
Query: 229 YLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK------GTYGY 282
YLH +IHRD+KS NI L + K+ DFGL+ R SG + G+ +
Sbjct: 147 YLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLA---TVKSRWSGSQQVEQPTGSVLW 200
Query: 283 IDPAYI---STNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDK 339
+ P I N F+ +SD++S+G++++EL+T P+ ++ + M G
Sbjct: 201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLS 260
Query: 340 QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
+L C + + R+ C+ K +RP ++ ++
Sbjct: 261 KLYKNCP----KAMKRLVADCVKKVKEERPLFPQILSSI 295
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 135/275 (49%), Gaps = 25/275 (9%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVL--ASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYC 182
+G G+FG VYK G A+K+L + + Q + F+ EV +L + H N++ +GY
Sbjct: 18 IGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRD 242
K + ++ ++ SL + ++ E + + IA + G++YLH ++ IHRD
Sbjct: 76 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI---IHRD 131
Query: 243 LKSANILLDHFMRAKVADFGLSKEEVFDGRNSG------LKGTYGYIDPAYI---STNKF 293
LKS NI L + K+ DFGL+ R SG L G+ ++ P I N +
Sbjct: 132 LKSNNIFLHEDLTVKIGDFGLA---TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 188
Query: 294 TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
+ +SD+++FG++++EL+T P+ N+ + M G ++ C + +
Sbjct: 189 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP----KAM 244
Query: 354 ARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAK 388
R+ +CL K +RP ++ A +++ R L K
Sbjct: 245 KRLMAECLKKKRDERPLFPQIL-ASIELLARSLPK 278
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 129/265 (48%), Gaps = 22/265 (8%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHH 172
++ + T LG G FG V+ A+K L S + F E +L+ +L H
Sbjct: 5 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 63
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERV-LNWEERLQIALDISHGIEYLH 231
+ LV L + Y +I E+M NGSL + + + + L + L +A I+ G+ ++
Sbjct: 64 QRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 122
Query: 232 EGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYI 288
E IHR+L++ANIL+ + K+ADFGL++ + + R G K + P I
Sbjct: 123 ERNY---IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAR-EGAKFPIKWTAPEAI 178
Query: 289 STNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDK--QLVGACN 346
+ FT+KSD++SFG+++ E++T H + M+ V + L++ ++V N
Sbjct: 179 NYGTFTIKSDVWSFGILLTEIVT----HGR----IPYPGMTNPEVIQNLERGYRMVRPDN 230
Query: 347 IQEVRELARIGHKCLHKTPRKRPSI 371
E EL ++ C + P RP+
Sbjct: 231 CPE--ELYQLMRLCWKERPEDRPTF 253
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 135/275 (49%), Gaps = 25/275 (9%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVL--ASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYC 182
+G G+FG VYK G A+K+L + + Q + F+ EV +L + H N++ +GY
Sbjct: 21 IGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRD 242
K + ++ ++ SL + ++ E + + IA + G++YLH ++ IHRD
Sbjct: 79 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI---IHRD 134
Query: 243 LKSANILLDHFMRAKVADFGLSKEEVFDGRNSG------LKGTYGYIDPAYI---STNKF 293
LKS NI L + K+ DFGL+ R SG L G+ ++ P I N +
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLA---TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 294 TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
+ +SD+++FG++++EL+T P+ N+ + M G ++ C + +
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP----KAM 247
Query: 354 ARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAK 388
R+ +CL K +RP ++ A +++ R L K
Sbjct: 248 KRLMAECLKKKRDERPLFPQIL-ASIELLARSLPK 281
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 130/273 (47%), Gaps = 23/273 (8%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHH 172
+I + + LG G FG V+ AT A+K + S E F E +++ L H
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQH 69
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERL-QIALDISHGIEYLH 231
LV L V K +I EFM+ GSL + + S+E +L + I+ G+ ++
Sbjct: 70 DKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 128
Query: 232 EGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYI 288
+ IHRDL++ANIL+ + K+ADFGL++ + + R G K + P I
Sbjct: 129 QRNY---IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTARE-GAKFPIKWTAPEAI 184
Query: 289 STNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDK--QLVGACN 346
+ FT+KSD++SFG+++ E++T + MS V L++ ++ N
Sbjct: 185 NFGSFTIKSDVWSFGILLMEIVTYGR--------IPYPGMSNPEVIRALERGYRMPRPEN 236
Query: 347 IQEVRELARIGHKCLHKTPRKRPSIGEVTQALL 379
E EL I +C P +RP+ E Q++L
Sbjct: 237 CPE--ELYNIMMRCWKNRPEERPTF-EYIQSVL 266
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 146/293 (49%), Gaps = 50/293 (17%)
Query: 125 LGQGAFGPVYKATM------PSGGVAAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLVN 177
LG+G FG V KAT A+K+L ++ E ++ +E ++L +++H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLI-----------------------YSEERVLNWE 214
L G C G +LI E+ GSL + + +ER L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 215 ERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNS 274
+ + A IS G++YL E + ++HRDL + NIL+ + K++DFGLS+ +V++ +S
Sbjct: 151 DLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSR-DVYE-EDS 205
Query: 275 GLKGTYGYIDPAYISTNK-----FTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASM 328
+K + G I +++ +T +SD++SFGV+++E++T +P+ + L ++
Sbjct: 206 XVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE-RLFNL 264
Query: 329 SQDGVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+ G ++ N E E+ R+ +C + P KRP ++++ L K+
Sbjct: 265 LKTG------HRMERPDNCSE--EMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 135/275 (49%), Gaps = 25/275 (9%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVL--ASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYC 182
+G G+FG VYK G A+K+L + + Q + F+ EV +L + H N++ +GY
Sbjct: 43 IGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRD 242
K + ++ ++ SL + ++ E + + IA + G++YLH ++ IHRD
Sbjct: 101 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI---IHRD 156
Query: 243 LKSANILLDHFMRAKVADFGLSKEEVFDGRNSG------LKGTYGYIDPAYI---STNKF 293
LKS NI L + K+ DFGL+ R SG L G+ ++ P I N +
Sbjct: 157 LKSNNIFLHEDLTVKIGDFGLA---TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 213
Query: 294 TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
+ +SD+++FG++++EL+T P+ N+ + M G ++ C + +
Sbjct: 214 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP----KAM 269
Query: 354 ARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAK 388
R+ +CL K +RP ++ A +++ R L K
Sbjct: 270 KRLMAECLKKKRDERPLFPQIL-ASIELLARSLPK 303
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 135/275 (49%), Gaps = 25/275 (9%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVL--ASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYC 182
+G G+FG VYK G A+K+L + + Q + F+ EV +L + H N++ +GY
Sbjct: 44 IGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRD 242
K + ++ ++ SL + ++ E + + IA + G++YLH ++ IHRD
Sbjct: 102 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI---IHRD 157
Query: 243 LKSANILLDHFMRAKVADFGLSKEEVFDGRNSG------LKGTYGYIDPAYI---STNKF 293
LKS NI L + K+ DFGL+ R SG L G+ ++ P I N +
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLA---TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 294 TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
+ +SD+++FG++++EL+T P+ N+ + M G ++ C + +
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP----KAM 270
Query: 354 ARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAK 388
R+ +CL K +RP ++ A +++ R L K
Sbjct: 271 KRLMAECLKKKRDERPLFPQIL-ASIELLARSLPK 304
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 130/265 (49%), Gaps = 24/265 (9%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVL--ASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYC 182
+G G+FG VYK G A+K+L + + Q + F+ EV +L + H N++ +GY
Sbjct: 16 IGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRD 242
K + ++ ++ SL + ++ E + + IA + G++YLH ++ IHRD
Sbjct: 74 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI---IHRD 129
Query: 243 LKSANILLDHFMRAKVADFGLSKEEVFDGRNSG------LKGTYGYIDPAYI---STNKF 293
LKS NI L + K+ DFGL+ R SG L G+ ++ P I N +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLA---TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 294 TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
+ +SD+++FG++++EL+T P+ N+ + M G ++ C + +
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP----KAM 242
Query: 354 ARIGHKCLHKTPRKRPSIGEVTQAL 378
R+ +CL K +RP ++ ++
Sbjct: 243 KRLMAECLKKKRDERPLFPQILASI 267
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 145/293 (49%), Gaps = 50/293 (17%)
Query: 125 LGQGAFGPVYKATM------PSGGVAAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLVN 177
LG+G FG V KAT A+K+L ++ E ++ +E ++L +++H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLI-----------------------YSEERVLNWE 214
L G C G +LI E+ GSL + + +ER L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 215 ERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNS 274
+ + A IS G++YL E ++HRDL + NIL+ + K++DFGLS+ +V++ +S
Sbjct: 151 DLISFAWQISQGMQYLAEMK---LVHRDLAARNILVAEGRKMKISDFGLSR-DVYE-EDS 205
Query: 275 GLKGTYGYIDPAYISTNK-----FTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASM 328
+K + G I +++ +T +SD++SFGV+++E++T +P+ + L ++
Sbjct: 206 XVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE-RLFNL 264
Query: 329 SQDGVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+ G ++ N E E+ R+ +C + P KRP ++++ L K+
Sbjct: 265 LKTG------HRMERPDNCSE--EMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 131/279 (46%), Gaps = 37/279 (13%)
Query: 125 LGQGAFGPVYKATM----PSGG--VAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNL 178
LG+GAFG V+ A P+ + A+K L + K+FQ E LL L H ++V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 179 IGYCVDKGKYMLIYEFMSNGSLSN-----------LIYSEERV----LNWEERLQIALDI 223
G C D ++++E+M +G L+ L+ + R L + L IA I
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKG----T 279
+ G+ YL A +HRDL + N L+ + K+ DFG+S+ +V+ + G
Sbjct: 143 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR-DVYSTDYYRVGGHTMLP 198
Query: 280 YGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDK 339
++ P I KFT +SD++SFGVI++E+ T + Q + N + +L++
Sbjct: 199 IRWMPPESIMYRKFTTESDVWSFGVILWEIFT--YGKQPWFQLSNTEVIECITQGRVLER 256
Query: 340 QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
V +E+ + C + P++R +I E+ + L
Sbjct: 257 PRVCP------KEVYDVMLGCWQREPQQRLNIKEIYKIL 289
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 136/286 (47%), Gaps = 32/286 (11%)
Query: 112 KDIQKATQNFTNILGQGAFGPVYKATMPSGG----VAAIKVLASD-SHQGEKEFQTEVSL 166
K+I + ++G G FG V + + + G AIK L + + +EF +E S+
Sbjct: 9 KEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASI 68
Query: 167 LGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHG 226
+G+ H N++ L G + M++ EFM NG+L + + + + + + I+ G
Sbjct: 69 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASG 128
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNS---------GLK 277
+ YL E + +HRDL + NIL++ + KV+DFGLS+ F NS G K
Sbjct: 129 MRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSR---FLEENSSDPTYTSSLGGK 182
Query: 278 GTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEI 336
+ P I+ KFT SD +S+G++++E+++ P+ ++ +QD ++ I
Sbjct: 183 IPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDM--------SNQDVINAI 234
Query: 337 -LDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
D +L + L ++ C K RP +V AL K+
Sbjct: 235 EQDYRLPPPPDCPT--SLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 136/283 (48%), Gaps = 26/283 (9%)
Query: 112 KDIQKATQNFTNILGQGAFGPVYKATMPSGG----VAAIKVLASD-SHQGEKEFQTEVSL 166
K+I + ++G G FG V + + + G AIK L + + +EF +E S+
Sbjct: 11 KEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASI 70
Query: 167 LGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHG 226
+G+ H N++ L G + M++ EFM NG+L + + + + + + I+ G
Sbjct: 71 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASG 130
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK------EEVFDGRNSGLKGTY 280
+ YL E + +HRDL + NIL++ + KV+DFGLS+ + + + G K
Sbjct: 131 MRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPI 187
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEI-LD 338
+ P I+ KFT SD +S+G++++E+++ P+ ++ +QD ++ I D
Sbjct: 188 RWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDM--------SNQDVINAIEQD 239
Query: 339 KQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+L + L ++ C K RP +V AL K+
Sbjct: 240 YRLPPPPDCPT--SLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 135/283 (47%), Gaps = 36/283 (12%)
Query: 125 LGQGAFGPVYKAT----MPSGG--VAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNL 178
LG+GAFG V+ A +P + A+K L S ++FQ E LL L H+++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 179 IGYCVDKGKYMLIYEFMSNGSLSNLIYSE----------ERV----LNWEERLQIALDIS 224
G C + ++++E+M +G L+ + S E V L + L +A ++
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 225 HGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKG----TY 280
G+ YL A +HRDL + N L+ + K+ DFG+S+ +++ + G
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR-DIYSTDYYRVGGRTMLPI 201
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQ 340
++ P I KFT +SD++SFGV+++E+ T + Q + N ++ D + + + +
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFT--YGKQPWYQLSNTEAI--DCITQGRELE 257
Query: 341 LVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQ 383
AC E+ I C + P++R SI +V L + Q
Sbjct: 258 RPRACP----PEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 296
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 108/189 (57%), Gaps = 10/189 (5%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVD 184
+G+G FG V G A+K + +D+ + F E S++ +L H NLV L+G V+
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 185 -KGKYMLIYEFMSNGSLSNLIYSEER-VLNWEERLQIALDISHGIEYLHEGAVPPVIHRD 242
KG ++ E+M+ GSL + + S R VL + L+ +LD+ +EYL EG +HRD
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL-EGN--NFVHRD 133
Query: 243 LKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFSF 302
L + N+L+ AKV+DFGL+K E +++G K + P + F+ KSD++SF
Sbjct: 134 LAARNVLVSEDNVAKVSDFGLTK-EASSTQDTG-KLPVKWTAPEALREAAFSTKSDVWSF 191
Query: 303 GVIIFELIT 311
G++++E+ +
Sbjct: 192 GILLWEIYS 200
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 135/283 (47%), Gaps = 36/283 (12%)
Query: 125 LGQGAFGPVYKAT----MPSGG--VAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNL 178
LG+GAFG V+ A +P + A+K L S ++FQ E LL L H+++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 179 IGYCVDKGKYMLIYEFMSNGSLSNLIYSE----------ERV----LNWEERLQIALDIS 224
G C + ++++E+M +G L+ + S E V L + L +A ++
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 225 HGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKG----TY 280
G+ YL A +HRDL + N L+ + K+ DFG+S+ +++ + G
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR-DIYSTDYYRVGGRTMLPI 195
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQ 340
++ P I KFT +SD++SFGV+++E+ T + Q + N ++ D + + + +
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFT--YGKQPWYQLSNTEAI--DCITQGRELE 251
Query: 341 LVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQ 383
AC E+ I C + P++R SI +V L + Q
Sbjct: 252 RPRACP----PEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 290
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 140/302 (46%), Gaps = 33/302 (10%)
Query: 95 DRFTSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGG----VAAIKVL- 149
D FT + +A K+I + ++G G FG V + G AIK L
Sbjct: 8 DPFTFEDPNQAVREFA-KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLK 66
Query: 150 ASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEER 209
A + + ++F +E S++G+ H N+++L G M+I E+M NGSL + +
Sbjct: 67 AGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG 126
Query: 210 VLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---- 265
+ + + I G++YL + + +HRDL + NIL++ + KV+DFG+S+
Sbjct: 127 RFTVIQLVGMLRGIGSGMKYLSDMS---AVHRDLAARNILVNSNLVCKVSDFGMSRVLED 183
Query: 266 --EEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEY 322
E + R G K + P I+ KFT SD++S+G++++E+++ P+ ++
Sbjct: 184 DPEAAYTTR--GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM--- 238
Query: 323 VNLASMSQDGVDEILDKQLVGA---CNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALL 379
+QD + I + + C I L ++ C K RP G++ L
Sbjct: 239 -----SNQDVIKAIEEGYRLPPPMDCPIA----LHQLMLDCWQKERSDRPKFGQIVNMLD 289
Query: 380 KI 381
K+
Sbjct: 290 KL 291
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 145/293 (49%), Gaps = 50/293 (17%)
Query: 125 LGQGAFGPVYKATM------PSGGVAAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLVN 177
LG+G FG V KAT A+K+L ++ E ++ +E ++L +++H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLI-----------------------YSEERVLNWE 214
L G C G +LI E+ GSL + + +ER L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 215 ERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNS 274
+ + A IS G++YL E ++HRDL + NIL+ + K++DFGLS+ +V++ +S
Sbjct: 151 DLISFAWQISQGMQYLAEMK---LVHRDLAARNILVAEGRKMKISDFGLSR-DVYE-EDS 205
Query: 275 GLKGTYGYIDPAYISTNK-----FTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASM 328
+K + G I +++ +T +SD++SFGV+++E++T +P+ + L ++
Sbjct: 206 YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE-RLFNL 264
Query: 329 SQDGVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+ G ++ N E E+ R+ +C + P KRP ++++ L K+
Sbjct: 265 LKTG------HRMERPDNCSE--EMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 135/283 (47%), Gaps = 36/283 (12%)
Query: 125 LGQGAFGPVYKAT----MPSGG--VAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNL 178
LG+GAFG V+ A +P + A+K L S ++FQ E LL L H+++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 179 IGYCVDKGKYMLIYEFMSNGSLSNLIYSE----------ERV----LNWEERLQIALDIS 224
G C + ++++E+M +G L+ + S E V L + L +A ++
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 225 HGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKG----TY 280
G+ YL A +HRDL + N L+ + K+ DFG+S+ +++ + G
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR-DIYSTDYYRVGGRTMLPI 224
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQ 340
++ P I KFT +SD++SFGV+++E+ T + Q + N ++ D + + + +
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFT--YGKQPWYQLSNTEAI--DCITQGRELE 280
Query: 341 LVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQ 383
AC E+ I C + P++R SI +V L + Q
Sbjct: 281 RPRACP----PEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 134/275 (48%), Gaps = 25/275 (9%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVL--ASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYC 182
+G G+FG VYK G A+K+L + + Q + F+ EV +L + H N++ +GY
Sbjct: 16 IGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRD 242
+ ++ ++ SL + ++ E + + IA + G++YLH ++ IHRD
Sbjct: 74 TAP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI---IHRD 129
Query: 243 LKSANILLDHFMRAKVADFGLSKEEVFDGRNSG------LKGTYGYIDPAYI---STNKF 293
LKS NI L + K+ DFGL+ R SG L G+ ++ P I N +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLA---TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 294 TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
+ +SD+++FG++++EL+T P+ N+ + M G ++ C + +
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCP----KAM 242
Query: 354 ARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAK 388
R+ +CL K +RP ++ A +++ R L K
Sbjct: 243 KRLMAECLKKKRDERPLFPQIL-ASIELLARSLPK 276
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 6/205 (2%)
Query: 109 YAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLG 168
Y +I F LG G FG V AIK++ S E EF E ++
Sbjct: 7 YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMM 65
Query: 169 RLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIE 228
L H LV L G C + +I E+M+NG L N + ++ L++ D+ +E
Sbjct: 66 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 125
Query: 229 YLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNS--GLKGTYGYIDPA 286
YL +HRDL + N L++ KV+DFGLS+ + D S G K + P
Sbjct: 126 YLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPE 182
Query: 287 YISTNKFTMKSDIFSFGVIIFELIT 311
+ +KF+ KSDI++FGV+++E+ +
Sbjct: 183 VLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 6/201 (2%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHH 172
+I F LG G FG V AIK++ S E EF E ++ L H
Sbjct: 4 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSH 62
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
LV L G C + +I E+M+NG L N + ++ L++ D+ +EYL
Sbjct: 63 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 122
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNS--GLKGTYGYIDPAYIST 290
+HRDL + N L++ KV+DFGLS+ + D S G K + P +
Sbjct: 123 KQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY 179
Query: 291 NKFTMKSDIFSFGVIIFELIT 311
+KF+ KSDI++FGV+++E+ +
Sbjct: 180 SKFSSKSDIWAFGVLMWEIYS 200
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 6/201 (2%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHH 172
+I F LG G FG V AIK++ S E EF E ++ L H
Sbjct: 5 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSH 63
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
LV L G C + +I E+M+NG L N + ++ L++ D+ +EYL
Sbjct: 64 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 123
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNS--GLKGTYGYIDPAYIST 290
+HRDL + N L++ KV+DFGLS+ + D S G K + P +
Sbjct: 124 KQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMY 180
Query: 291 NKFTMKSDIFSFGVIIFELIT 311
+KF+ KSDI++FGV+++E+ +
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYS 201
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 125/261 (47%), Gaps = 21/261 (8%)
Query: 125 LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCV 183
LG GAFG VYKA +G +AA KV+ + S + +++ E+ +L H +V L+G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 184 DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL-DISHGIEYLHEGAVPPVIHRD 242
GK ++ EF G++ ++ +R L E ++Q+ + + +LH +IHRD
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLT-EPQIQVVCRQMLEALNFLHSKR---IIHRD 142
Query: 243 LKSANILLDHFMRAKVADFGLSKE--EVFDGRNSGLKGTYGYIDPAYI-----STNKFTM 295
LK+ N+L+ ++ADFG+S + + R+S + GT ++ P + +
Sbjct: 143 LKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GTPYWMAPEVVMCETMKDTPYDY 201
Query: 296 KSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVRELAR 355
K+DI+S G+ + E+ PH L L +++ +L E R+ +
Sbjct: 202 KADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSV----EFRDFLK 257
Query: 356 IGHKCLHKTPRKRPSIGEVTQ 376
I L K P RPS ++ +
Sbjct: 258 IA---LDKNPETRPSAAQLLE 275
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 125/261 (47%), Gaps = 21/261 (8%)
Query: 125 LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCV 183
LG GAFG VYKA +G +AA KV+ + S + +++ E+ +L H +V L+G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 184 DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL-DISHGIEYLHEGAVPPVIHRD 242
GK ++ EF G++ ++ +R L E ++Q+ + + +LH +IHRD
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLT-EPQIQVVCRQMLEALNFLHSKR---IIHRD 134
Query: 243 LKSANILLDHFMRAKVADFGLSKE--EVFDGRNSGLKGTYGYIDPAYI-----STNKFTM 295
LK+ N+L+ ++ADFG+S + + R+S + GT ++ P + +
Sbjct: 135 LKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GTPYWMAPEVVMCETMKDTPYDY 193
Query: 296 KSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVRELAR 355
K+DI+S G+ + E+ PH L L +++ +L E R+ +
Sbjct: 194 KADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSV----EFRDFLK 249
Query: 356 IGHKCLHKTPRKRPSIGEVTQ 376
I L K P RPS ++ +
Sbjct: 250 IA---LDKNPETRPSAAQLLE 267
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 95/194 (48%), Gaps = 6/194 (3%)
Query: 120 NFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLI 179
F LG G FG V AIK++ S E EF E ++ L H LV L
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLY 65
Query: 180 GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVI 239
G C + +I E+M+NG L N + ++ L++ D+ +EYL +
Sbjct: 66 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FL 122
Query: 240 HRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNS--GLKGTYGYIDPAYISTNKFTMKS 297
HRDL + N L++ KV+DFGLS+ + D S G K + P + +KF+ KS
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 298 DIFSFGVIIFELIT 311
DI++FGV+++E+ +
Sbjct: 183 DIWAFGVLMWEIYS 196
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 6/201 (2%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHH 172
+I F LG G FG V AIK++ S E EF E ++ L H
Sbjct: 5 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSH 63
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
LV L G C + +I E+M+NG L N + ++ L++ D+ +EYL
Sbjct: 64 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 123
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNS--GLKGTYGYIDPAYIST 290
+HRDL + N L++ KV+DFGLS+ + D S G K + P +
Sbjct: 124 KQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMY 180
Query: 291 NKFTMKSDIFSFGVIIFELIT 311
+KF+ KSDI++FGV+++E+ +
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYS 201
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 130/281 (46%), Gaps = 30/281 (10%)
Query: 120 NFTNILGQGAFGPVYKATMP-----SGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRN 174
+ + LG+G FG V +G + A+K L +++FQ E+ +L LH
Sbjct: 26 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 85
Query: 175 LVNLIGYCVDKGK--YMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+V G G+ L+ E++ +G L + + L+ L + I G+EYL
Sbjct: 86 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 145
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAY 287
+HRDL + NIL++ K+ADFGL+K ++ + R G + Y P
Sbjct: 146 RRC---VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA-PES 201
Query: 288 ISTNKFTMKSDIFSFGVIIFELIT----AIHPHQNLMEYV----NLASMSQDGVDEILDK 339
+S N F+ +SD++SFGV+++EL T + P + + ++ ++S+ +
Sbjct: 202 LSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQ 261
Query: 340 QLVG--ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
+L AC EV EL ++ C +P+ RPS + L
Sbjct: 262 RLPAPPACPA-EVHELMKL---CWAPSPQDRPSFSALGPQL 298
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 130/281 (46%), Gaps = 30/281 (10%)
Query: 120 NFTNILGQGAFGPVYKATMP-----SGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRN 174
+ + LG+G FG V +G + A+K L +++FQ E+ +L LH
Sbjct: 13 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 72
Query: 175 LVNLIGYCVDKGK--YMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+V G G+ L+ E++ +G L + + L+ L + I G+EYL
Sbjct: 73 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 132
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAY 287
+HRDL + NIL++ K+ADFGL+K ++ + R G + Y P
Sbjct: 133 RRC---VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA-PES 188
Query: 288 ISTNKFTMKSDIFSFGVIIFELIT----AIHPHQNLMEYV----NLASMSQDGVDEILDK 339
+S N F+ +SD++SFGV+++EL T + P + + ++ ++S+ +
Sbjct: 189 LSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSRLLELLEEGQ 248
Query: 340 QLVG--ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
+L AC EV EL ++ C +P+ RPS + L
Sbjct: 249 RLPAPPACPA-EVHELMKL---CWAPSPQDRPSFSALGPQL 285
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 124/262 (47%), Gaps = 14/262 (5%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVD 184
LG G FG V A+K++ S E EF E + +L H LV G C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 185 KGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLK 244
+ ++ E++SNG L N + S + L + L++ D+ G+ +L IHRDL
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLA 131
Query: 245 SANILLDHFMRAKVADFGLSKEEVFDGRNS--GLKGTYGYIDPAYISTNKFTMKSDIFSF 302
+ N L+D + KV+DFG+++ + D S G K + P K++ KSD+++F
Sbjct: 132 ARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAF 191
Query: 303 GVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVRELARIGHKCLH 362
G++++E+ + +L Y N + + L + + + I + I + C H
Sbjct: 192 GILMWEVFSLGKMPYDL--YTNSEVVLKVSQGHRLYRPHLASDTIYQ------IMYSCWH 243
Query: 363 KTPRKRPSIGEVTQALLKIKQR 384
+ P KRP+ ++ ++ ++++
Sbjct: 244 ELPEKRPTFQQLLSSIEPLREK 265
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 134/285 (47%), Gaps = 32/285 (11%)
Query: 112 KDIQKATQNFTNILGQGAFGPVYKATMPSGG----VAAIKVL-ASDSHQGEKEFQTEVSL 166
K+I + ++G G FG V + G AIK L A + + ++F +E S+
Sbjct: 3 KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 62
Query: 167 LGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHG 226
+G+ H N+++L G M+I E+M NGSL + + + + + I G
Sbjct: 63 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 122
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK------EEVFDGRNSGLKGTY 280
++YL + + +HRDL + NIL++ + KV+DFG+S+ E + R G K
Sbjct: 123 MKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR--GGKIPI 177
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDK 339
+ P I+ KFT SD++S+G++++E+++ P+ ++ +QD + I +
Sbjct: 178 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM--------SNQDVIKAIEEG 229
Query: 340 QLVGA---CNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+ C I L ++ C K RP G++ L K+
Sbjct: 230 YRLPPPMDCPIA----LHQLMLDCWQKERSDRPKFGQIVNMLDKL 270
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 134/285 (47%), Gaps = 32/285 (11%)
Query: 112 KDIQKATQNFTNILGQGAFGPVYKATMPSGG----VAAIKVL-ASDSHQGEKEFQTEVSL 166
K+I + ++G G FG V + G AIK L A + + ++F +E S+
Sbjct: 9 KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 68
Query: 167 LGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHG 226
+G+ H N+++L G M+I E+M NGSL + + + + + I G
Sbjct: 69 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 128
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK------EEVFDGRNSGLKGTY 280
++YL + + +HRDL + NIL++ + KV+DFG+S+ E + R G K
Sbjct: 129 MKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR--GGKIPI 183
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDK 339
+ P I+ KFT SD++S+G++++E+++ P+ ++ +QD + I +
Sbjct: 184 RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM--------SNQDVIKAIEEG 235
Query: 340 QLVGA---CNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+ C I L ++ C K RP G++ L K+
Sbjct: 236 YRLPPPMDCPIA----LHQLMLDCWQKERSDRPKFGQIVNMLDKL 276
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 107/211 (50%), Gaps = 16/211 (7%)
Query: 112 KDIQKATQNFTNILGQGAFGPVYKATMPSGG----VAAIKVL-ASDSHQGEKEFQTEVSL 166
K+I+ + ++G G FG V + G AIK L + + ++F E S+
Sbjct: 17 KEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASI 76
Query: 167 LGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHG 226
+G+ H N+++L G M++ E+M NGSL + + + + + IS G
Sbjct: 77 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAG 136
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK------EEVFDGRNSGLKGTY 280
++YL + +HRDL + NIL++ + KV+DFGLS+ E + R G K
Sbjct: 137 MKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR--GGKIPI 191
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
+ P I+ KFT SD++S+G++++E+++
Sbjct: 192 RWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 124 ILGQGAFGPVYKATMPSGG-----VAAIKVLASDSHQGEK-EFQTEVSLLGRLHHRNLVN 177
++G G FG VYK + + AIK L + + ++ +F E ++G+ H N++
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
L G M+I E+M NG+L + ++ + + + + I+ G++YL A
Sbjct: 111 LEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL---ANMN 167
Query: 238 VIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGR----NSGLKGTYGYIDPAYISTNKF 293
+HRDL + NIL++ + KV+DFGLS+ D SG K + P IS KF
Sbjct: 168 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKF 227
Query: 294 TMKSDIFSFGVIIFELIT 311
T SD++SFG++++E++T
Sbjct: 228 TSASDVWSFGIVMWEVMT 245
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 134/293 (45%), Gaps = 47/293 (16%)
Query: 121 FTNILGQGAFGPVYKATMPSGGV------AAIKVLASDSHQGEKE-FQTEVSLLGRL-HH 172
F LG GAFG V +AT G A+K+L S +H EKE +E+ ++ L H
Sbjct: 35 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 94
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIY----------------------SEERV 210
N+VNL+G C G ++I E+ G L N + + R
Sbjct: 95 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRP 154
Query: 211 LNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFD 270
L + L + ++ G+ +L A IHRD+ + N+LL + AK+ DFGL++ ++ +
Sbjct: 155 LELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMN 210
Query: 271 GRNSGLKGT----YGYIDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNL 325
N +KG ++ P I +T++SD++S+G++++E+ + ++P+ ++
Sbjct: 211 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF 270
Query: 326 ASMSQDGVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
+ +DG + + NI + + C P RP+ ++ L
Sbjct: 271 YKLVKDGYQ--MAQPAFAPKNIYSIMQ------ACWALEPTHRPTFQQICSFL 315
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 132/283 (46%), Gaps = 26/283 (9%)
Query: 112 KDIQKATQNFTNILGQGAFGPVYKATMPSGG----VAAIKVLASD-SHQGEKEFQTEVSL 166
K+I + ++G G FG V + G AIK L S + + ++F +E S+
Sbjct: 2 KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASI 61
Query: 167 LGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHG 226
+G+ H N+++L G M+I EFM NGSL + + + + + + I+ G
Sbjct: 62 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAG 121
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYG----- 281
++YL + +HR L + NIL++ + KV+DFGLS+ D + G
Sbjct: 122 MKYLADMN---YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPI 178
Query: 282 -YIDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEI-LD 338
+ P I KFT SD++S+G++++E+++ P+ ++ +QD ++ I D
Sbjct: 179 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM--------TNQDVINAIEQD 230
Query: 339 KQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+L + L ++ C K RP G++ L K+
Sbjct: 231 YRLPPPMDCPSA--LHQLMLDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 128/281 (45%), Gaps = 30/281 (10%)
Query: 120 NFTNILGQGAFGPVYKATMP-----SGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRN 174
+ + LG+G FG V +G + A+K L +++FQ E+ +L LH
Sbjct: 10 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 69
Query: 175 LVNLIG--YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+V G Y + + L+ E++ +G L + + L+ L + I G+EYL
Sbjct: 70 IVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 129
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG-----RNSGLKGTYGYIDPAY 287
+HRDL + NIL++ K+ADFGL+K D R G + Y P
Sbjct: 130 RRC---VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYA-PES 185
Query: 288 ISTNKFTMKSDIFSFGVIIFELIT----AIHPHQNLMEYV----NLASMSQDGVDEILDK 339
+S N F+ +SD++SFGV+++EL T + P + + ++ ++ + +
Sbjct: 186 LSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQ 245
Query: 340 QLVG--ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
+L AC EV EL ++ C +P+ RPS + L
Sbjct: 246 RLPAPPACPA-EVHELMKL---CWAPSPQDRPSFSALGPQL 282
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 26/209 (12%)
Query: 125 LGQGAFGPVYKATM----PSGG--VAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNL 178
LG+GAFG V+ A P + A+K L S K+F E LL L H ++V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 179 IGYCVDKGKYMLIYEFMSNGSLSNLI--YSEERVLNWE----------ERLQIALDISHG 226
G CV+ ++++E+M +G L+ + + + VL E + L IA I+ G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKG----TYGY 282
+ YL A +HRDL + N L+ + K+ DFG+S+ +V+ + G +
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR-DVYSTDYYRVGGHTMLPIRW 196
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELIT 311
+ P I KFT +SD++S GV+++E+ T
Sbjct: 197 MPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 129/281 (45%), Gaps = 30/281 (10%)
Query: 120 NFTNILGQGAFGPVYKATMP-----SGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRN 174
+ + LG+G FG V +G + A+K L +++FQ E+ +L LH
Sbjct: 14 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 73
Query: 175 LVNLIGYCVDKGK--YMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+V G G+ L+ E++ +G L + + L+ L + I G+EYL
Sbjct: 74 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS 133
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAY 287
+HRDL + NIL++ K+ADFGL+K ++ + R G + Y P
Sbjct: 134 RRC---VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA-PES 189
Query: 288 ISTNKFTMKSDIFSFGVIIFELIT----AIHPHQNLMEYV----NLASMSQDGVDEILDK 339
+S N F+ +SD++SFGV+++EL T + P + + ++ ++ + +
Sbjct: 190 LSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQ 249
Query: 340 QLVG--ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
+L AC EV EL ++ C +P+ RPS + L
Sbjct: 250 RLPAPPACPA-EVHELMKL---CWAPSPQDRPSFSALGPQL 286
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 110/214 (51%), Gaps = 19/214 (8%)
Query: 103 ASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQT 162
A IPR + K ++K LG G FG V+ + A+K L + + F
Sbjct: 6 AWEIPRESIKLVKK--------LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLE 56
Query: 163 EVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEE--RVLNWEERLQIA 220
E +L+ L H LV L + +I EFM+ GSL + + S+E +VL + + +
Sbjct: 57 EANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVL-LPKLIDFS 115
Query: 221 LDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLK 277
I+ G+ Y+ IHRDL++AN+L+ + K+ADFGL++ + + R G K
Sbjct: 116 AQIAEGMAYIERKNY---IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR-EGAK 171
Query: 278 GTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
+ P I+ FT+KS+++SFG++++E++T
Sbjct: 172 FPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 137/303 (45%), Gaps = 49/303 (16%)
Query: 120 NFTNILGQGAFGPVYKA------TMPSGGVAAIKVLASD-SHQGEKEFQTEVSLLGRL-H 171
N LG+GAFG V +A + A+K+L +H + +E+ +L + H
Sbjct: 31 NLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 90
Query: 172 HRNLVNLIGYCVDKG-KYMLIYEFMSNGSLSNLIYSEER--------------VLNWEER 216
H N+VNL+G C G M+I EF G+LS + S+ L E
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 217 LQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG---RN 273
+ + ++ G+E+L A IHRDL + NILL K+ DFGL+++ D R
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 274 SGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGV 333
+ ++ P I +T++SD++SFGV+++E+ + L + GV
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------LGASPYPGV 254
Query: 334 --DEILDKQLVGACNIQ----EVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLA 387
DE ++L ++ E+ + C H P +RP+ E+ + L + Q + A
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN-A 313
Query: 388 KQD 390
+QD
Sbjct: 314 QQD 316
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 132/293 (45%), Gaps = 45/293 (15%)
Query: 120 NFTNILGQGAFGPVYKA------TMPSGGVAAIKVLASD-SHQGEKEFQTEVSLLGRL-H 171
N LG+GAFG V +A + A+K+L +H + +E+ +L + H
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 172 HRNLVNLIGYCVDKG-KYMLIYEFMSNGSLSNLIYSEER-----------VLNWEERLQI 219
H N+VNL+G C G M+I EF G+LS + S+ L E +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG---RNSGL 276
+ ++ G+E+L A IHRDL + NILL K+ DFGL+++ D R
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA 206
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGV--D 334
+ ++ P I +T++SD++SFGV+++E+ + L + GV D
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------LGASPYPGVKID 253
Query: 335 EILDKQLVGACNIQ----EVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQ 383
E ++L ++ E+ + C H P +RP+ E+ + L + Q
Sbjct: 254 EEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 306
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 21/207 (10%)
Query: 123 NILGQGAFGPVYKATMPSGGVA----AIKVLASDSHQGEKEFQT--EVSLLGRLHHRNLV 176
+LGQG+FG V+ SG A A+KVL + + +T E +L ++H +V
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 177 NLIGYCVDKGKYMLIYEFMSNGSL-----SNLIYSEERVLNWEERLQIALDISHGIEYLH 231
L +GK LI +F+ G L ++++EE V + L +ALD H +
Sbjct: 91 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL---- 146
Query: 232 EGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEV-FDGRNSGLKGTYGYIDPAYIST 290
+I+RDLK NILLD K+ DFGLSKE + + + GT Y+ P ++
Sbjct: 147 -----GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 201
Query: 291 NKFTMKSDIFSFGVIIFELITAIHPHQ 317
T +D +SFGV++FE++T P Q
Sbjct: 202 RGHTQSADWWSFGVLMFEMLTGTLPFQ 228
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 21/207 (10%)
Query: 123 NILGQGAFGPVYKATMPSGGVA----AIKVLASDSHQGEKEFQT--EVSLLGRLHHRNLV 176
+LGQG+FG V+ SG A A+KVL + + +T E +L ++H +V
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 177 NLIGYCVDKGKYMLIYEFMSNGSL-----SNLIYSEERVLNWEERLQIALDISHGIEYLH 231
L +GK LI +F+ G L ++++EE V + L +ALD H +
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL---- 145
Query: 232 EGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEV-FDGRNSGLKGTYGYIDPAYIST 290
+I+RDLK NILLD K+ DFGLSKE + + + GT Y+ P ++
Sbjct: 146 -----GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 291 NKFTMKSDIFSFGVIIFELITAIHPHQ 317
T +D +SFGV++FE++T P Q
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 110/214 (51%), Gaps = 19/214 (8%)
Query: 103 ASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQT 162
A IPR + K +++ LG G FG V+ + A+K L + + F
Sbjct: 7 AWEIPRESIKLVKR--------LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLE 57
Query: 163 EVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEE--RVLNWEERLQIA 220
E +L+ L H LV L + +I E+M+ GSL + + S+E +VL + + +
Sbjct: 58 EANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFS 116
Query: 221 LDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLK 277
I+ G+ Y+ IHRDL++AN+L+ + K+ADFGL++ + + R G K
Sbjct: 117 AQIAEGMAYIERKNY---IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE-GAK 172
Query: 278 GTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
+ P I+ FT+KSD++SFG++++E++T
Sbjct: 173 FPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVT 206
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 104/207 (50%), Gaps = 21/207 (10%)
Query: 123 NILGQGAFGPVYKATMPSGGVA----AIKVLASDSHQGEKEFQT--EVSLLGRLHHRNLV 176
+LGQG+FG V+ SG A A+KVL + + +T E +L ++H +V
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 177 NLIGYCVDKGKYMLIYEFMSNGSL-----SNLIYSEERVLNWEERLQIALDISHGIEYLH 231
L +GK LI +F+ G L ++++EE V + L +ALD H +
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG--- 146
Query: 232 EGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEV-FDGRNSGLKGTYGYIDPAYIST 290
+I+RDLK NILLD K+ DFGLSKE + + + GT Y+ P ++
Sbjct: 147 ------IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 291 NKFTMKSDIFSFGVIIFELITAIHPHQ 317
T +D +SFGV++FE++T P Q
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 110/203 (54%), Gaps = 13/203 (6%)
Query: 123 NILGQGAFGPVY---KATMP-SGGVAAIKVLASDSHQGEKEFQT--EVSLLGRLHHRNLV 176
+LGQG+FG V+ K T P SG + A+KVL + + +T E +L ++H +V
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 177 NLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL-DISHGIEYLHEGAV 235
L +GK LI +F+ G L + E V+ EE ++ L +++ G+++LH +
Sbjct: 94 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALGLDHLHSLGI 151
Query: 236 PPVIHRDLKSANILLDHFMRAKVADFGLSKEEV-FDGRNSGLKGTYGYIDPAYISTNKFT 294
I+RDLK NILLD K+ DFGLSKE + + + GT Y+ P ++ +
Sbjct: 152 ---IYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHS 208
Query: 295 MKSDIFSFGVIIFELITAIHPHQ 317
+D +S+GV++FE++T P Q
Sbjct: 209 HSADWWSYGVLMFEMLTGSLPFQ 231
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 132/293 (45%), Gaps = 45/293 (15%)
Query: 120 NFTNILGQGAFGPVYKA------TMPSGGVAAIKVLASD-SHQGEKEFQTEVSLLGRL-H 171
N LG+GAFG V +A + A+K+L +H + +E+ +L + H
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 172 HRNLVNLIGYCVDKG-KYMLIYEFMSNGSLSNLIYSEER-----------VLNWEERLQI 219
H N+VNL+G C G M+I EF G+LS + S+ L E +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG---RNSGL 276
+ ++ G+E+L A IHRDL + NILL K+ DFGL+++ D R
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGV--D 334
+ ++ P I +T++SD++SFGV+++E+ + L + GV D
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------LGASPYPGVKID 253
Query: 335 EILDKQLVGACNIQ----EVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQ 383
E ++L ++ E+ + C H P +RP+ E+ + L + Q
Sbjct: 254 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 306
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 136/297 (45%), Gaps = 48/297 (16%)
Query: 125 LGQGAFGPVYKA------TMPSGGVAAIKVLASD-SHQGEKEFQTEVSLLGRL-HHRNLV 176
LG+GAFG V +A + A+K+L +H + +E+ +L + HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 177 NLIGYCVDKG-KYMLIYEFMSNGSLSNLIYSEER-------------VLNWEERLQIALD 222
NL+G C G M+I EF G+LS + S+ L E + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG---RNSGLKGT 279
++ G+E+L A IHRDL + NILL K+ DFGL+++ D R +
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 280 YGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGV--DEIL 337
++ P I +T++SD++SFGV+++E+ + L + GV DE
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------LGASPYPGVKIDEEF 260
Query: 338 DKQLVGACNIQ----EVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQD 390
++L ++ E+ + C H P +RP+ E+ + L + Q + A+QD
Sbjct: 261 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN-AQQD 316
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 115/234 (49%), Gaps = 25/234 (10%)
Query: 125 LGQGAFGPV----YKATMP-SGGVAAIKVLASDS-HQGEKEFQTEVSLLGRLHHRNLVNL 178
LG+G FG V Y T +G + A+K L +D+ Q ++ E+ +L L+H +++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 179 IGYCVDKG--KYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVP 236
G C D G L+ E++ GSL + Y + + L A I G+ YLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRD--YLPRHSIGLAQLLLFAQQICEGMAYLHAQHY- 155
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYISTN 291
IHRDL + N+LLD+ K+ DFGL+K E + R G + Y P +
Sbjct: 156 --IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYA-PECLKEY 212
Query: 292 KFTMKSDIFSFGVIIFELIT----AIHPHQNLMEYVNLA--SMSQDGVDEILDK 339
KF SD++SFGV ++EL+T + P +E + +A M+ + E+L++
Sbjct: 213 KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLER 266
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 136/299 (45%), Gaps = 50/299 (16%)
Query: 125 LGQGAFGPVYKA------TMPSGGVAAIKVLASD-SHQGEKEFQTEVSLLGRL-HHRNLV 176
LG+GAFG V +A + A+K+L +H + +E+ +L + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 177 NLIGYCVDKG-KYMLIYEFMSNGSLSNLIYSEER---------------VLNWEERLQIA 220
NL+G C G M+I EF G+LS + S+ L E + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 221 LDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG---RNSGLK 277
++ G+E+L A IHRDL + NILL K+ DFGL+++ D R +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 278 GTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGV--DE 335
++ P I +T++SD++SFGV+++E+ + L + GV DE
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------LGASPYPGVKIDE 249
Query: 336 ILDKQLVGACNIQ----EVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQD 390
++L ++ E+ + C H P +RP+ E+ + L + Q + A+QD
Sbjct: 250 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN-AQQD 307
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 108/211 (51%), Gaps = 16/211 (7%)
Query: 112 KDIQKATQNFTNILGQGAFGPVY--KATMPSGG--VAAIKVL-ASDSHQGEKEFQTEVSL 166
K++ + ++G G FG V + +PS AIK L + + ++F E S+
Sbjct: 11 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 167 LGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHG 226
+G+ H N++ L G M++ E+M NGSL + + + + + + I+ G
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK------EEVFDGRNSGLKGTY 280
++YL + +HRDL + NIL++ + KV+DFGLS+ E + R G K
Sbjct: 131 MKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR--GGKIPI 185
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
+ P I+ KFT SD++S+G++++E+++
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 108/211 (51%), Gaps = 16/211 (7%)
Query: 112 KDIQKATQNFTNILGQGAFGPVY--KATMPSGG--VAAIKVL-ASDSHQGEKEFQTEVSL 166
K++ + ++G G FG V + +PS AIK L + + ++F E S+
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 167 LGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHG 226
+G+ H N++ L G M++ E+M NGSL + + + + + + I+ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK------EEVFDGRNSGLKGTY 280
++YL + +HRDL + NIL++ + KV+DFGLS+ E + R G K
Sbjct: 160 MKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR--GGKIPI 214
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
+ P I+ KFT SD++S+G++++E+++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 108/211 (51%), Gaps = 16/211 (7%)
Query: 112 KDIQKATQNFTNILGQGAFGPVY--KATMPSGG--VAAIKVL-ASDSHQGEKEFQTEVSL 166
K++ + ++G G FG V + +PS AIK L + + ++F E S+
Sbjct: 28 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 87
Query: 167 LGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHG 226
+G+ H N++ L G M++ E+M NGSL + + + + + + I+ G
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 147
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK------EEVFDGRNSGLKGTY 280
++YL + +HRDL + NIL++ + KV+DFGLS+ E + R G K
Sbjct: 148 MKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR--GGKIPI 202
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
+ P I+ KFT SD++S+G++++E+++
Sbjct: 203 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 136/299 (45%), Gaps = 50/299 (16%)
Query: 125 LGQGAFGPVYKA------TMPSGGVAAIKVLASD-SHQGEKEFQTEVSLLGRL-HHRNLV 176
LG+GAFG V +A + A+K+L +H + +E+ +L + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 177 NLIGYCVDKG-KYMLIYEFMSNGSLSNLIYSEER---------------VLNWEERLQIA 220
NL+G C G M+I EF G+LS + S+ L E + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 221 LDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG---RNSGLK 277
++ G+E+L A IHRDL + NILL K+ DFGL+++ D R +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 278 GTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGV--DE 335
++ P I +T++SD++SFGV+++E+ + L + GV DE
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------LGASPYPGVKIDE 249
Query: 336 ILDKQLVGACNIQ----EVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQD 390
++L ++ E+ + C H P +RP+ E+ + L + Q + A+QD
Sbjct: 250 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN-AQQD 307
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 136/299 (45%), Gaps = 50/299 (16%)
Query: 125 LGQGAFGPVYKA------TMPSGGVAAIKVLASD-SHQGEKEFQTEVSLLGRL-HHRNLV 176
LG+GAFG V +A + A+K+L +H + +E+ +L + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 177 NLIGYCVDKG-KYMLIYEFMSNGSLSNLIYSEER---------------VLNWEERLQIA 220
NL+G C G M+I EF G+LS + S+ L E + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 221 LDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG---RNSGLK 277
++ G+E+L A IHRDL + NILL K+ DFGL+++ D R +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 278 GTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGV--DE 335
++ P I +T++SD++SFGV+++E+ + L + GV DE
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------LGASPYPGVKIDE 249
Query: 336 ILDKQLVGACNIQ----EVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQD 390
++L ++ E+ + C H P +RP+ E+ + L + Q + A+QD
Sbjct: 250 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN-AQQD 307
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 108/211 (51%), Gaps = 16/211 (7%)
Query: 112 KDIQKATQNFTNILGQGAFGPVY--KATMPSGG--VAAIKVL-ASDSHQGEKEFQTEVSL 166
K++ + ++G G FG V + +PS AIK L + + ++F E S+
Sbjct: 38 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 97
Query: 167 LGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHG 226
+G+ H N++ L G M++ E+M NGSL + + + + + + I+ G
Sbjct: 98 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 157
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK------EEVFDGRNSGLKGTY 280
++YL + +HRDL + NIL++ + KV+DFGLS+ E + R G K
Sbjct: 158 MKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR--GGKIPI 212
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
+ P I+ KFT SD++S+G++++E+++
Sbjct: 213 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 136/299 (45%), Gaps = 50/299 (16%)
Query: 125 LGQGAFGPVYKA------TMPSGGVAAIKVLASD-SHQGEKEFQTEVSLLGRL-HHRNLV 176
LG+GAFG V +A + A+K+L +H + +E+ +L + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 177 NLIGYCVDKG-KYMLIYEFMSNGSLSNLIYSEER---------------VLNWEERLQIA 220
NL+G C G M+I EF G+LS + S+ L E + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 221 LDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG---RNSGLK 277
++ G+E+L A IHRDL + NILL K+ DFGL+++ D R +
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 278 GTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGV--DE 335
++ P I +T++SD++SFGV+++E+ + L + GV DE
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------LGASPYPGVKIDE 258
Query: 336 ILDKQLVGACNIQ----EVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQD 390
++L ++ E+ + C H P +RP+ E+ + L + Q + A+QD
Sbjct: 259 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN-AQQD 316
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 136/299 (45%), Gaps = 50/299 (16%)
Query: 125 LGQGAFGPVYKA------TMPSGGVAAIKVLASD-SHQGEKEFQTEVSLLGRL-HHRNLV 176
LG+GAFG V +A + A+K+L +H + +E+ +L + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 177 NLIGYCVDKG-KYMLIYEFMSNGSLSNLIYSEER---------------VLNWEERLQIA 220
NL+G C G M+I EF G+LS + S+ L E + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 221 LDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG---RNSGLK 277
++ G+E+L A IHRDL + NILL K+ DFGL+++ D R +
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 278 GTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGV--DE 335
++ P I +T++SD++SFGV+++E+ + L + GV DE
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------LGASPYPGVKIDE 258
Query: 336 ILDKQLVGACNIQ----EVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQD 390
++L ++ E+ + C H P +RP+ E+ + L + Q + A+QD
Sbjct: 259 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN-AQQD 316
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 136/299 (45%), Gaps = 50/299 (16%)
Query: 125 LGQGAFGPVYKA------TMPSGGVAAIKVLASD-SHQGEKEFQTEVSLLGRL-HHRNLV 176
LG+GAFG V +A + A+K+L +H + +E+ +L + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 177 NLIGYCVDKG-KYMLIYEFMSNGSLSNLIYSEER---------------VLNWEERLQIA 220
NL+G C G M+I EF G+LS + S+ L E + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 221 LDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG---RNSGLK 277
++ G+E+L A IHRDL + NILL K+ DFGL+++ D R +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 278 GTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGV--DE 335
++ P I +T++SD++SFGV+++E+ + L + GV DE
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------LGASPYPGVKIDE 249
Query: 336 ILDKQLVGACNIQ----EVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQD 390
++L ++ E+ + C H P +RP+ E+ + L + Q + A+QD
Sbjct: 250 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN-AQQD 307
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 108/211 (51%), Gaps = 16/211 (7%)
Query: 112 KDIQKATQNFTNILGQGAFGPVY--KATMPSGG--VAAIKVL-ASDSHQGEKEFQTEVSL 166
K++ + ++G G FG V + +PS AIK L + + ++F E S+
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 167 LGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHG 226
+G+ H N++ L G M++ E+M NGSL + + + + + + I+ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK------EEVFDGRNSGLKGTY 280
++YL + +HRDL + NIL++ + KV+DFGLS+ E + R G K
Sbjct: 160 MKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR--GGKIPI 214
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
+ P I+ KFT SD++S+G++++E+++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 109/222 (49%), Gaps = 15/222 (6%)
Query: 100 APSASGIPRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSGGV----AAIKVL-ASD 152
PS + P A I K T+ +LG GAFG VYK +P G AIK+L +
Sbjct: 21 TPSGTA-PNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT 79
Query: 153 SHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLN 212
+ EF E ++ + H +LV L+G C+ L+ + M +G L ++ + +
Sbjct: 80 GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIG 138
Query: 213 WEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGR 272
+ L + I+ G+ YL E ++HRDL + N+L+ K+ DFGL++ D +
Sbjct: 139 SQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 195
Query: 273 N---SGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
G K ++ I KFT +SD++S+GV I+EL+T
Sbjct: 196 EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 108/211 (51%), Gaps = 16/211 (7%)
Query: 112 KDIQKATQNFTNILGQGAFGPVY--KATMPSGG--VAAIKVL-ASDSHQGEKEFQTEVSL 166
K++ + ++G G FG V + +PS AIK L + + ++F E S+
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 167 LGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHG 226
+G+ H N++ L G M++ E+M NGSL + + + + + + I+ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK------EEVFDGRNSGLKGTY 280
++YL + +HRDL + NIL++ + KV+DFGLS+ E + R G K
Sbjct: 160 MKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR--GGKIPI 214
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
+ P I+ KFT SD++S+G++++E+++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 108/211 (51%), Gaps = 16/211 (7%)
Query: 112 KDIQKATQNFTNILGQGAFGPVY--KATMPSGG--VAAIKVL-ASDSHQGEKEFQTEVSL 166
K++ + ++G G FG V + +PS AIK L + + ++F E S+
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 167 LGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHG 226
+G+ H N++ L G M++ E+M NGSL + + + + + + I+ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK------EEVFDGRNSGLKGTY 280
++YL + +HRDL + NIL++ + KV+DFGLS+ E + R G K
Sbjct: 160 MKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR--GGKIPI 214
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
+ P I+ KFT SD++S+G++++E+++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 116/234 (49%), Gaps = 25/234 (10%)
Query: 125 LGQGAFGPV----YKATMP-SGGVAAIKVLASDS-HQGEKEFQTEVSLLGRLHHRNLVNL 178
LG+G FG V Y T +G + A+K L +D Q ++ E+ +L L+H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 179 IGYCVDKGK--YMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVP 236
G C D+G+ L+ E++ GSL + Y + + L A I G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRD--YLPRHSIGLAQLLLFAQQICEGMAYLHSQHY- 138
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYISTN 291
IHR+L + N+LLD+ K+ DFGL+K E + R G + Y P +
Sbjct: 139 --IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-PECLKEY 195
Query: 292 KFTMKSDIFSFGVIIFELIT----AIHPHQNLMEYVNLA--SMSQDGVDEILDK 339
KF SD++SFGV ++EL+T + P +E + +A M+ + E+L++
Sbjct: 196 KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLER 249
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 108/211 (51%), Gaps = 16/211 (7%)
Query: 112 KDIQKATQNFTNILGQGAFGPVY--KATMPSGG--VAAIKVL-ASDSHQGEKEFQTEVSL 166
K++ + ++G G FG V + +PS AIK L + + ++F E S+
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 167 LGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHG 226
+G+ H N++ L G M++ E+M NGSL + + + + + + I+ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK------EEVFDGRNSGLKGTY 280
++YL + +HRDL + NIL++ + KV+DFGLS+ E + R G K
Sbjct: 160 MKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR--GGKIPI 214
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
+ P I+ KFT SD++S+G++++E+++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 136/299 (45%), Gaps = 50/299 (16%)
Query: 125 LGQGAFGPVYKA------TMPSGGVAAIKVLASD-SHQGEKEFQTEVSLLGRL-HHRNLV 176
LG+GAFG V +A + A+K+L +H + +E+ +L + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 177 NLIGYCVDKG-KYMLIYEFMSNGSLSNLIYSEER---------------VLNWEERLQIA 220
NL+G C G M+I EF G+LS + S+ L E + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 221 LDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG---RNSGLK 277
++ G+E+L A IHRDL + NILL K+ DFGL+++ D R +
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 278 GTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGV--DE 335
++ P I +T++SD++SFGV+++E+ + L + GV DE
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------LGASPYPGVKIDE 258
Query: 336 ILDKQLVGACNIQ----EVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQD 390
++L ++ E+ + C H P +RP+ E+ + L + Q + A+QD
Sbjct: 259 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN-AQQD 316
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 136/299 (45%), Gaps = 50/299 (16%)
Query: 125 LGQGAFGPVYKA------TMPSGGVAAIKVLASD-SHQGEKEFQTEVSLLGRL-HHRNLV 176
LG+GAFG V +A + A+K+L +H + +E+ +L + HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 177 NLIGYCVDKG-KYMLIYEFMSNGSLSNLIYSEER---------------VLNWEERLQIA 220
NL+G C G M+I EF G+LS + S+ L E + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 221 LDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG---RNSGLK 277
++ G+E+L A IHRDL + NILL K+ DFGL+++ D R +
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 278 GTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGV--DE 335
++ P I +T++SD++SFGV+++E+ + L + GV DE
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------LGASPYPGVKIDE 260
Query: 336 ILDKQLVGACNIQ----EVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQD 390
++L ++ E+ + C H P +RP+ E+ + L + Q + A+QD
Sbjct: 261 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN-AQQD 318
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 116/234 (49%), Gaps = 25/234 (10%)
Query: 125 LGQGAFGPV----YKATMP-SGGVAAIKVLASDS-HQGEKEFQTEVSLLGRLHHRNLVNL 178
LG+G FG V Y T +G + A+K L +D Q ++ E+ +L L+H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 179 IGYCVDKGK--YMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVP 236
G C D+G+ L+ E++ GSL + Y + + L A I G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRD--YLPRHSIGLAQLLLFAQQICEGMAYLHAQHY- 138
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYISTN 291
IHR+L + N+LLD+ K+ DFGL+K E + R G + Y P +
Sbjct: 139 --IHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-PECLKEY 195
Query: 292 KFTMKSDIFSFGVIIFELIT----AIHPHQNLMEYVNLA--SMSQDGVDEILDK 339
KF SD++SFGV ++EL+T + P +E + +A M+ + E+L++
Sbjct: 196 KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLER 249
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 131/290 (45%), Gaps = 50/290 (17%)
Query: 125 LGQGAFGPVYKATMP-----SGGVAAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLVNL 178
LG+G FG V +G A+K L +S + + E+ +L L+H N+V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 179 IGYCVDKGK--YMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVP 236
G C + G LI EF+ +GSL + + +N +++L+ A+ I G++YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ-- 134
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSK--------EEVFDGRNSGLKGTYGYIDPAYI 288
+HRDL + N+L++ + K+ DFGL+K V D R+S + + P +
Sbjct: 135 -YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV----FWYAPECL 189
Query: 289 STNKFTMKSDIFSFGVIIFELIT--------------AIHPHQNLMEYVNLASMSQDGVD 334
+KF + SD++SFGV + EL+T I P M L + ++G
Sbjct: 190 MQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEG-- 247
Query: 335 EILDKQLVGACNI-QEVRELARIGHKCLHKTPRKRPSIGEVT---QALLK 380
K+L N EV +L R KC P R S + +ALLK
Sbjct: 248 ----KRLPCPPNCPDEVYQLMR---KCWEFQPSNRTSFQNLIEGFEALLK 290
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 136/299 (45%), Gaps = 50/299 (16%)
Query: 125 LGQGAFGPVYKA------TMPSGGVAAIKVLASD-SHQGEKEFQTEVSLLGRL-HHRNLV 176
LG+GAFG V +A + A+K+L +H + +E+ +L + HH N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 177 NLIGYCVDKG-KYMLIYEFMSNGSLSNLIYSEER---------------VLNWEERLQIA 220
NL+G C G M+I EF G+LS + S+ L E + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 221 LDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG---RNSGLK 277
++ G+E+L A IHRDL + NILL K+ DFGL+++ D R +
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 278 GTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGV--DE 335
++ P I +T++SD++SFGV+++E+ + L + GV DE
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------------LGASPYPGVKIDE 295
Query: 336 ILDKQLVGACNIQ----EVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQD 390
++L ++ E+ + C H P +RP+ E+ + L + Q + A+QD
Sbjct: 296 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN-AQQD 353
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 131/290 (45%), Gaps = 50/290 (17%)
Query: 125 LGQGAFGPVYKATMP-----SGGVAAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLVNL 178
LG+G FG V +G A+K L +S + + E+ +L L+H N+V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 179 IGYCVDKGK--YMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVP 236
G C + G LI EF+ +GSL + + +N +++L+ A+ I G++YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ-- 146
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSK--------EEVFDGRNSGLKGTYGYIDPAYI 288
+HRDL + N+L++ + K+ DFGL+K V D R+S + + P +
Sbjct: 147 -YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV----FWYAPECL 201
Query: 289 STNKFTMKSDIFSFGVIIFELIT--------------AIHPHQNLMEYVNLASMSQDGVD 334
+KF + SD++SFGV + EL+T I P M L + ++G
Sbjct: 202 MQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEG-- 259
Query: 335 EILDKQLVGACNI-QEVRELARIGHKCLHKTPRKRPSIG---EVTQALLK 380
K+L N EV +L R KC P R S E +ALLK
Sbjct: 260 ----KRLPCPPNCPDEVYQLMR---KCWEFQPSNRTSFQNLIEGFEALLK 302
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 12/203 (5%)
Query: 125 LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCV 183
LG GAFG VYKA V AA KV+ + S + +++ E+ +L H N+V L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 184 DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDIS-HGIEYLHEGAVPPVIHRD 242
+ ++ EF + G++ ++ ER L E ++Q+ + + YLH+ +IHRD
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLT-ESQIQVVCKQTLDALNYLHDNK---IIHRD 160
Query: 243 LKSANILLDHFMRAKVADFGLS-KEEVFDGRNSGLKGTYGYIDPAYI--STNK---FTMK 296
LK+ NIL K+ADFG+S K R GT ++ P + T+K + K
Sbjct: 161 LKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYK 220
Query: 297 SDIFSFGVIIFELITAIHPHQNL 319
+D++S G+ + E+ PH L
Sbjct: 221 ADVWSLGITLIEMAEIEPPHHEL 243
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 102/203 (50%), Gaps = 12/203 (5%)
Query: 125 LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCV 183
LG GAFG VYKA V AA KV+ + S + +++ E+ +L H N+V L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 184 DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDIS-HGIEYLHEGAVPPVIHRD 242
+ ++ EF + G++ ++ ER L E ++Q+ + + YLH+ +IHRD
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLT-ESQIQVVCKQTLDALNYLHDNK---IIHRD 160
Query: 243 LKSANILLDHFMRAKVADFGLSKEEVFD-GRNSGLKGTYGYIDPAYI--STNK---FTMK 296
LK+ NIL K+ADFG+S + R GT ++ P + T+K + K
Sbjct: 161 LKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYK 220
Query: 297 SDIFSFGVIIFELITAIHPHQNL 319
+D++S G+ + E+ PH L
Sbjct: 221 ADVWSLGITLIEMAEIEPPHHEL 243
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 132/279 (47%), Gaps = 30/279 (10%)
Query: 115 QKATQNFTNILGQGAFGPVYKATMPSGGV----AAIKVLASDSHQGEKE-FQTEVSLLGR 169
++ + ++G+G FG VY AIK L+ + + E F E L+
Sbjct: 19 ERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRG 78
Query: 170 LHHRNLVNLIGYCVD-KGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIE 228
L+H N++ LIG + +G ++ +M +G L I S +R ++ + L ++ G+E
Sbjct: 79 LNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGME 138
Query: 229 YLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE-------EVFDGRNSGLKGTYG 281
YL E +HRDL + N +LD KVADFGL+++ V R++ L +
Sbjct: 139 YLAEQKF---VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWT 195
Query: 282 YIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQL 341
++ + T +FT KSD++SFGV+++EL+T P ++ +L G ++L
Sbjct: 196 ALES--LQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQG------RRL 247
Query: 342 VGACNIQEVRELARIGHKCLHKTPRKRPS----IGEVTQ 376
+ L ++ +C P RP+ +GEV Q
Sbjct: 248 PQPEYCPD--SLYQVMQQCWEADPAVRPTFRVLVGEVEQ 284
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 18/212 (8%)
Query: 112 KDIQKATQNFTNILGQGAFGPVY--KATMPSGG--VAAIKVL-ASDSHQGEKEFQTEVSL 166
K++ + ++G G FG V + +PS AIK L + + ++F E S+
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 167 LGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHG 226
+G+ H N++ L G M++ E M NGSL + + + + + + I+ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 227 IEYLHE-GAVPPVIHRDLKSANILLDHFMRAKVADFGLSK------EEVFDGRNSGLKGT 279
++YL + GAV HRDL + NIL++ + KV+DFGLS+ E + R G K
Sbjct: 160 MKYLSDMGAV----HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR--GGKIP 213
Query: 280 YGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
+ P I+ KFT SD++S+G++++E+++
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 131/291 (45%), Gaps = 42/291 (14%)
Query: 120 NFTNILGQGAFGPVYKATM------PSGGVAAIKVLASDSHQGEKE-FQTEVSLLGRL-H 171
+F LG GAFG V +AT + A+K+L +H E+E +E+ +L L +
Sbjct: 42 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 101
Query: 172 HRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEER--------------- 216
H N+VNL+G C G ++I E+ G L N + + +
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 161
Query: 217 --LQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNS 274
L + ++ G+ +L A IHRDL + NILL H K+ DFGL++ ++ + N
Sbjct: 162 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR-DIKNDSNY 217
Query: 275 GLKGT----YGYIDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMS 329
+KG ++ P I +T +SD++S+G+ ++EL + P+ + M
Sbjct: 218 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 277
Query: 330 QDGVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLK 380
++G +L + A E+ I C P KRP+ ++ Q + K
Sbjct: 278 KEGF-RMLSPEHAPA-------EMYDIMKTCWDADPLKRPTFKQIVQLIEK 320
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 131/291 (45%), Gaps = 42/291 (14%)
Query: 120 NFTNILGQGAFGPVYKATM------PSGGVAAIKVLASDSHQGEKE-FQTEVSLLGRL-H 171
+F LG GAFG V +AT + A+K+L +H E+E +E+ +L L +
Sbjct: 44 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 103
Query: 172 HRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEER--------------- 216
H N+VNL+G C G ++I E+ G L N + + +
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 163
Query: 217 --LQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNS 274
L + ++ G+ +L A IHRDL + NILL H K+ DFGL++ ++ + N
Sbjct: 164 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR-DIKNDSNY 219
Query: 275 GLKGT----YGYIDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMS 329
+KG ++ P I +T +SD++S+G+ ++EL + P+ + M
Sbjct: 220 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 279
Query: 330 QDGVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLK 380
++G +L + A E+ I C P KRP+ ++ Q + K
Sbjct: 280 KEGF-RMLSPEHAPA-------EMYDIMKTCWDADPLKRPTFKQIVQLIEK 322
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 105/211 (49%), Gaps = 16/211 (7%)
Query: 112 KDIQKATQNFTNILGQGAFGPVYKATMPSGG----VAAIKVL-ASDSHQGEKEFQTEVSL 166
K++ + ++G G FG V + G AIK L + + ++F E S+
Sbjct: 38 KELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASI 97
Query: 167 LGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHG 226
+G+ H N+V+L G M++ EFM NG+L + + + + + I+ G
Sbjct: 98 MGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAG 157
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK------EEVFDGRNSGLKGTY 280
+ YL + +HRDL + NIL++ + KV+DFGLS+ E V+ +G K
Sbjct: 158 MRYLADMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVY--TTTGGKIPV 212
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
+ P I KFT SD++S+G++++E+++
Sbjct: 213 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 12/203 (5%)
Query: 125 LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCV 183
LG GAFG VYKA V AA KV+ + S + +++ E+ +L H N+V L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 184 DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDIS-HGIEYLHEGAVPPVIHRD 242
+ ++ EF + G++ ++ ER L E ++Q+ + + YLH+ +IHRD
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLT-ESQIQVVCKQTLDALNYLHDNK---IIHRD 160
Query: 243 LKSANILLDHFMRAKVADFGLS-KEEVFDGRNSGLKGTYGYIDPAYI--STNK---FTMK 296
LK+ NIL K+ADFG+S K R GT ++ P + T+K + K
Sbjct: 161 LKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYK 220
Query: 297 SDIFSFGVIIFELITAIHPHQNL 319
+D++S G+ + E+ PH L
Sbjct: 221 ADVWSLGITLIEMAEIEPPHHEL 243
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 131/291 (45%), Gaps = 42/291 (14%)
Query: 120 NFTNILGQGAFGPVYKATM------PSGGVAAIKVLASDSHQGEKE-FQTEVSLLGRL-H 171
+F LG GAFG V +AT + A+K+L +H E+E +E+ +L L +
Sbjct: 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 85
Query: 172 HRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEER--------------- 216
H N+VNL+G C G ++I E+ G L N + + +
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 217 --LQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNS 274
L + ++ G+ +L A IHRDL + NILL H K+ DFGL++ ++ + N
Sbjct: 146 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR-DIKNDSNY 201
Query: 275 GLKGT----YGYIDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMS 329
+KG ++ P I +T +SD++S+G+ ++EL + P+ + M
Sbjct: 202 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 261
Query: 330 QDGVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLK 380
++G +L + A E+ I C P KRP+ ++ Q + K
Sbjct: 262 KEGF-RMLSPEHAPA-------EMYDIMKTCWDADPLKRPTFKQIVQLIEK 304
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 108/211 (51%), Gaps = 16/211 (7%)
Query: 112 KDIQKATQNFTNILGQGAFGPVY--KATMPSGG--VAAIKVL-ASDSHQGEKEFQTEVSL 166
K++ + ++G G FG V + +PS AIK L + + ++F E S+
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 167 LGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHG 226
+G+ H N++ L G M++ E+M NGSL + + + + + + I+ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK------EEVFDGRNSGLKGTY 280
++YL + +HRDL + NIL++ + KV+DFGL++ E + R G K
Sbjct: 160 MKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTR--GGKIPI 214
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
+ P I+ KFT SD++S+G++++E+++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 131/291 (45%), Gaps = 42/291 (14%)
Query: 120 NFTNILGQGAFGPVYKATM------PSGGVAAIKVLASDSHQGEKE-FQTEVSLLGRL-H 171
+F LG GAFG V +AT + A+K+L +H E+E +E+ +L L +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 172 HRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEER--------------- 216
H N+VNL+G C G ++I E+ G L N + + +
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 217 --LQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNS 274
L + ++ G+ +L A IHRDL + NILL H K+ DFGL++ ++ + N
Sbjct: 169 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR-DIKNDSNY 224
Query: 275 GLKGT----YGYIDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMS 329
+KG ++ P I +T +SD++S+G+ ++EL + P+ + M
Sbjct: 225 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 284
Query: 330 QDGVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLK 380
++G +L + A E+ I C P KRP+ ++ Q + K
Sbjct: 285 KEGF-RMLSPEHAPA-------EMYDIMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 129/277 (46%), Gaps = 22/277 (7%)
Query: 112 KDIQKATQNFTNILGQGAFGPVYKATMPSGG----VAAIKVL-ASDSHQGEKEFQTEVSL 166
++I+ + + I+G G G V + G AIK L A + + ++F +E S+
Sbjct: 44 REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASI 103
Query: 167 LGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHG 226
+G+ H N++ L G M++ E+M NGSL + + + + + + + G
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAG 163
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK--EEVFDG--RNSGLKGTYGY 282
+ YL + +HRDL + N+L+D + KV+DFGLS+ E+ D +G K +
Sbjct: 164 MRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRW 220
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQL 341
P I+ F+ SD++SFGV+++E++ P+ N+ ++S V+E
Sbjct: 221 TAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISS-----VEEGYRLPA 275
Query: 342 VGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
C L ++ C HK +RP ++ L
Sbjct: 276 PMGCP----HALHQLMLDCWHKDRAQRPRFSQIVSVL 308
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 129/277 (46%), Gaps = 22/277 (7%)
Query: 112 KDIQKATQNFTNILGQGAFGPVYKATMPSGG----VAAIKVL-ASDSHQGEKEFQTEVSL 166
++I+ + + I+G G G V + G AIK L A + + ++F +E S+
Sbjct: 44 REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASI 103
Query: 167 LGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHG 226
+G+ H N++ L G M++ E+M NGSL + + + + + + + G
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAG 163
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK--EEVFDG--RNSGLKGTYGY 282
+ YL + +HRDL + N+L+D + KV+DFGLS+ E+ D +G K +
Sbjct: 164 MRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRW 220
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQL 341
P I+ F+ SD++SFGV+++E++ P+ N+ ++S V+E
Sbjct: 221 TAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISS-----VEEGYRLPA 275
Query: 342 VGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
C L ++ C HK +RP ++ L
Sbjct: 276 PMGCP----HALHQLMLDCWHKDRAQRPRFSQIVSVL 308
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 107/211 (50%), Gaps = 16/211 (7%)
Query: 112 KDIQKATQNFTNILGQGAFGPVY--KATMPSGG--VAAIKVL-ASDSHQGEKEFQTEVSL 166
K++ + ++G G FG V + +PS AIK L + + ++F E S+
Sbjct: 11 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 167 LGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHG 226
+G+ H N++ L G M++ E M NGSL + + + + + + I+ G
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK------EEVFDGRNSGLKGTY 280
++YL + +HRDL + NIL++ + KV+DFGLS+ E + R G K
Sbjct: 131 MKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR--GGKIPI 185
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
+ P I+ KFT SD++S+G++++E+++
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 106/215 (49%), Gaps = 14/215 (6%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSGGVA----AIKVL-ASDSHQGEKE 159
P A I K T+ +LG GAFG VYK +P G AIK+L + + E
Sbjct: 4 PNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE 63
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI 219
F E ++ + H +LV L+G C+ L+ + M +G L ++ + + + L
Sbjct: 64 FMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW 122
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN---SGL 276
+ I+ G+ YL E + +HRDL + N+L+ K+ DFGL++ D + G
Sbjct: 123 CVQIAKGMMYLEERRL---VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGG 179
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
K ++ I KFT +SD++S+GV I+EL+T
Sbjct: 180 KMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 107/211 (50%), Gaps = 16/211 (7%)
Query: 112 KDIQKATQNFTNILGQGAFGPVY--KATMPSGG--VAAIKVL-ASDSHQGEKEFQTEVSL 166
K++ + ++G G FG V + +PS AIK L + + ++F E S+
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 167 LGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHG 226
+G+ H N++ L G M++ E M NGSL + + + + + + I+ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK------EEVFDGRNSGLKGTY 280
++YL + +HRDL + NIL++ + KV+DFGLS+ E + R G K
Sbjct: 160 MKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR--GGKIPI 214
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
+ P I+ KFT SD++S+G++++E+++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 107/211 (50%), Gaps = 16/211 (7%)
Query: 112 KDIQKATQNFTNILGQGAFGPVY--KATMPSGG--VAAIKVL-ASDSHQGEKEFQTEVSL 166
K++ + ++G G FG V + +PS AIK L + + ++F E S+
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 167 LGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHG 226
+G+ H N++ L G M++ E+M NGSL + + + + + + I+ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK------EEVFDGRNSGLKGTY 280
++YL + +HRDL + NIL++ + KV+DFGL + E + R G K
Sbjct: 160 MKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTR--GGKIPI 214
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
+ P I+ KFT SD++S+G++++E+++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 130/291 (44%), Gaps = 42/291 (14%)
Query: 120 NFTNILGQGAFGPVYKATM------PSGGVAAIKVLASDSHQGEKE-FQTEVSLLGRL-H 171
+F LG GAFG V +AT + A+K+L +H E+E +E+ +L L +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 172 HRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEER--------------- 216
H N+VNL+G C G ++I E+ G L N + + +
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 217 --LQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNS 274
L + ++ G+ +L A IHRDL + NILL H K+ DFGL++ + + N
Sbjct: 169 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLAR-HIKNDSNY 224
Query: 275 GLKGT----YGYIDPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMS 329
+KG ++ P I +T +SD++S+G+ ++EL + P+ + M
Sbjct: 225 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 284
Query: 330 QDGVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLK 380
++G +L + A E+ I C P KRP+ ++ Q + K
Sbjct: 285 KEGF-RMLSPEHAPA-------EMYDIMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 19/210 (9%)
Query: 121 FTNILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRL-HHRNLVNL 178
++G G +G VYK + +G +AAIKV+ + E+E + E+++L + HHRN+
Sbjct: 28 LVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATY 86
Query: 179 IGYCVDKG------KYMLIYEFMSNGSLSNLIYSEE-RVLNWEERLQIALDISHGIEYLH 231
G + K + L+ EF GS+++LI + + L E I +I G+ +LH
Sbjct: 87 YGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH 146
Query: 232 EGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE-EVFDGRNSGLKGTYGYIDPAYIST 290
+ V IHRD+K N+LL K+ DFG+S + + GR + GT ++ P I+
Sbjct: 147 QHKV---IHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIAC 203
Query: 291 NK-----FTMKSDIFSFGVIIFELITAIHP 315
++ + KSD++S G+ E+ P
Sbjct: 204 DENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 136/289 (47%), Gaps = 47/289 (16%)
Query: 125 LGQGAFGPVYKATM-------PSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRL-HHRN 174
LG+GAFG V A P+ A+K+L SD+ + + + +E+ ++ + H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSL---------SNLIYSEERVLNWEERL------QI 219
++NL+G C G +I E+ S G+L L YS N EE+L
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE----EVFDGRNSG 275
A ++ G+EYL A IHRDL + N+L+ K+ADFGL+++ + + +G
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 276 LKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT---AIHPHQNLMEYVNLASMSQDG 332
+ ++ P + +T +SD++SFGV+++E+ T + +P + E L
Sbjct: 206 -RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR- 263
Query: 333 VDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+DK C EL + C H P +RP+ ++ + L +I
Sbjct: 264 ----MDKP--SNC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 302
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 136/289 (47%), Gaps = 47/289 (16%)
Query: 125 LGQGAFGPVYKATM-------PSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRL-HHRN 174
LG+GAFG V A P+ A+K+L SD+ + + + +E+ ++ + H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSL---------SNLIYSEERVLNWEERL------QI 219
++NL+G C G +I E+ S G+L L YS N EE+L
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE----EVFDGRNSG 275
A ++ G+EYL A IHRDL + N+L+ K+ADFGL+++ + + +G
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 276 LKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT---AIHPHQNLMEYVNLASMSQDG 332
+ ++ P + +T +SD++SFGV+++E+ T + +P + E L
Sbjct: 205 -RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR- 262
Query: 333 VDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+DK C EL + C H P +RP+ ++ + L +I
Sbjct: 263 ----MDKP--SNC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 301
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 136/289 (47%), Gaps = 47/289 (16%)
Query: 125 LGQGAFGPVYKATM-------PSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRL-HHRN 174
LG+GAFG V A P+ A+K+L SD+ + + + +E+ ++ + H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSL---------SNLIYSEERVLNWEERL------QI 219
++NL+G C G +I E+ S G+L L YS N EE+L
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE----EVFDGRNSG 275
A ++ G+EYL A IHRDL + N+L+ K+ADFGL+++ + + +G
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 276 LKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT---AIHPHQNLMEYVNLASMSQDG 332
+ ++ P + +T +SD++SFGV+++E+ T + +P + E L
Sbjct: 202 -RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR- 259
Query: 333 VDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+DK C EL + C H P +RP+ ++ + L +I
Sbjct: 260 ----MDKP--SNC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 298
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 136/289 (47%), Gaps = 47/289 (16%)
Query: 125 LGQGAFGPVYKATM-------PSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRL-HHRN 174
LG+GAFG V A P+ A+K+L SD+ + + + +E+ ++ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSL---------SNLIYSEERVLNWEERL------QI 219
++NL+G C G +I E+ S G+L L YS N EE+L
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE----EVFDGRNSG 275
A ++ G+EYL A IHRDL + N+L+ K+ADFGL+++ + + +G
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 276 LKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT---AIHPHQNLMEYVNLASMSQDG 332
+ ++ P + +T +SD++SFGV+++E+ T + +P + E L
Sbjct: 213 -RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR- 270
Query: 333 VDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+DK C EL + C H P +RP+ ++ + L +I
Sbjct: 271 ----MDKP--SNC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 135/290 (46%), Gaps = 49/290 (16%)
Query: 125 LGQGAFGPVYKATM-------PSGGVA-AIKVLASDSHQGE-KEFQTEVSLLGRL-HHRN 174
LG+GAFG V A P V A+K+L D+ + + + +E+ ++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLI---------YS------EERVLNWEERLQI 219
++NL+G C G +I E+ S G+L + YS E + +++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGT 279
++ G+EYL A IHRDL + N+L+ K+ADFGL+++ + + K T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARD--INNIDXXKKTT 217
Query: 280 YG-----YIDPAYISTNKFTMKSDIFSFGVIIFELIT---AIHPHQNLMEYVNLASMSQD 331
G ++ P + +T +SD++SFGV+++E+ T + +P + E L
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
Query: 332 GVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+DK C EL + C H P +RP+ ++ + L +I
Sbjct: 278 -----MDKP--ANC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 135/290 (46%), Gaps = 49/290 (16%)
Query: 125 LGQGAFGPVYKATM-------PSGGVA-AIKVLASDSHQGE-KEFQTEVSLLGRL-HHRN 174
LG+GAFG V A P V A+K+L D+ + + + +E+ ++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLI-----------YSEERV----LNWEERLQI 219
++NL+G C G +I E+ S G+L + Y RV + +++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGT 279
++ G+EYL A IHRDL + N+L+ K+ADFGL+++ + + K T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARD--INNIDXXKKTT 217
Query: 280 YG-----YIDPAYISTNKFTMKSDIFSFGVIIFELIT---AIHPHQNLMEYVNLASMSQD 331
G ++ P + +T +SD++SFGV+++E+ T + +P + E L
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
Query: 332 GVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+DK C EL + C H P +RP+ ++ + L +I
Sbjct: 278 -----MDKP--ANC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 136/289 (47%), Gaps = 47/289 (16%)
Query: 125 LGQGAFGPVYKATM-------PSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRL-HHRN 174
LG+GAFG V A P+ A+K+L SD+ + + + +E+ ++ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSL---------SNLIYSEERVLNWEERL------QI 219
++NL+G C G +I E+ S G+L L YS N EE+L
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE----EVFDGRNSG 275
A ++ G+EYL A IHRDL + N+L+ K+ADFGL+++ + + +G
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 276 LKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT---AIHPHQNLMEYVNLASMSQDG 332
+ ++ P + +T +SD++SFGV+++E+ T + +P + E L
Sbjct: 213 -RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR- 270
Query: 333 VDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+DK C EL + C H P +RP+ ++ + L +I
Sbjct: 271 ----MDKP--SNC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 102/216 (47%), Gaps = 23/216 (10%)
Query: 125 LGQGAFGPV----YKATMP-SGGVAAIKVLASDS-HQGEKEFQTEVSLLGRLHHRNLVNL 178
LG+G FG V Y T +G + A+K L Q +Q E+ +L L+H ++V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 179 IGYCVDKGK--YMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVP 236
G C D+G+ L+ E++ GSL + Y + + L A I G+ YLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRD--YLPRHCVGLAQLLLFAQQICEGMAYLHAQHY- 132
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYISTN 291
IHR L + N+LLD+ K+ DFGL+K E + R G + Y P +
Sbjct: 133 --IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-PECLKEC 189
Query: 292 KFTMKSDIFSFGVIIFELITAIH----PHQNLMEYV 323
KF SD++SFGV ++EL+T PH E +
Sbjct: 190 KFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELI 225
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 102/216 (47%), Gaps = 23/216 (10%)
Query: 125 LGQGAFGPV----YKATMP-SGGVAAIKVLASDS-HQGEKEFQTEVSLLGRLHHRNLVNL 178
LG+G FG V Y T +G + A+K L Q +Q E+ +L L+H ++V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 179 IGYCVDKGK--YMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVP 236
G C D+G+ L+ E++ GSL + Y + + L A I G+ YLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRD--YLPRHCVGLAQLLLFAQQICEGMAYLHAQHY- 133
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYISTN 291
IHR L + N+LLD+ K+ DFGL+K E + R G + Y P +
Sbjct: 134 --IHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-PECLKEC 190
Query: 292 KFTMKSDIFSFGVIIFELITAIH----PHQNLMEYV 323
KF SD++SFGV ++EL+T PH E +
Sbjct: 191 KFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELI 226
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 119 QNFTNILGQ-GAFGPVYKATMPSGGV-AAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLV 176
++F I+G+ G FG VYKA V AA KV+ + S + +++ E+ +L H N+V
Sbjct: 11 EDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV 70
Query: 177 NLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDIS-HGIEYLHEGAV 235
L+ + ++ EF + G++ ++ ER L E ++Q+ + + YLH+
Sbjct: 71 KLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT-ESQIQVVCKQTLDALNYLHDNK- 128
Query: 236 PPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG--RNSGLKGTYGYIDPAYI--STN 291
+IHRDLK+ NIL K+ADFG+S + R GT ++ P + T+
Sbjct: 129 --IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETS 186
Query: 292 K---FTMKSDIFSFGVIIFELITAIHPHQNL 319
K + K+D++S G+ + E+ PH L
Sbjct: 187 KDRPYDYKADVWSLGITLIEMAEIEPPHHEL 217
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 124/276 (44%), Gaps = 45/276 (16%)
Query: 124 ILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYC 182
++G G FG V+KA G IK + ++ + E+E V L +L H N+V+ G C
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE----VKALAKLDHVNIVHYNG-C 72
Query: 183 VD----------------KGKYMLI-YEFMSNGSLSNLIYSEERVLNWEERLQIAL--DI 223
D K K + I EF G+L I + R ++ L + L I
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKVLALELFEQI 131
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYI 283
+ G++Y+H +I+RDLK +NI L + K+ DFGL DG+ KGT Y+
Sbjct: 132 TKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYM 188
Query: 284 DPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDG-VDEILDKQLV 342
P IS+ + + D+++ G+I+ EL +H E + +DG + +I DK+
Sbjct: 189 SPEQISSQDYGKEVDLYALGLILAEL---LHVCDTAFETSKFFTDLRDGIISDIFDKK-- 243
Query: 343 GACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
+ K L K P RP+ E+ + L
Sbjct: 244 ----------EKTLLQKLLSKKPEDRPNTSEILRTL 269
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 137/289 (47%), Gaps = 47/289 (16%)
Query: 125 LGQGAFGPVYKATM-------PSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRL-HHRN 174
LG+GAFG V A P+ A+K+L SD+ + + + +E+ ++ + H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLS---------------NLIYSEERVLNWEERLQI 219
++NL+G C G +I E+ S G+L N ++ E L+ ++ +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE----EVFDGRNSG 275
A ++ G+EYL A IHRDL + N+L+ K+ADFGL+++ + + +G
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 276 LKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT---AIHPHQNLMEYVNLASMSQDG 332
+ ++ P + +T +SD++SFGV+++E+ T + +P + E L
Sbjct: 198 -RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR- 255
Query: 333 VDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+DK C EL + C H P +RP+ ++ + L +I
Sbjct: 256 ----MDKP--SNC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 135/289 (46%), Gaps = 47/289 (16%)
Query: 125 LGQGAFGPVYKATM-------PSGGVA-AIKVLASDSHQGE-KEFQTEVSLLGRL-HHRN 174
LG+GAFG V A P V A+K+L D+ + + + +E+ ++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLI-----------YSEERV----LNWEERLQI 219
++NL+G C G +I E+ S G+L + Y RV + +++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE----EVFDGRNSG 275
++ G+EYL A IHRDL + N+L+ K+ADFGL+++ + + +G
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 276 LKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT---AIHPHQNLMEYVNLASMSQDG 332
+ ++ P + +T +SD++SFGV+++E+ T + +P + E L
Sbjct: 220 -RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR- 277
Query: 333 VDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+DK C EL + C H P +RP+ ++ + L +I
Sbjct: 278 ----MDKP--ANC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 136/289 (47%), Gaps = 47/289 (16%)
Query: 125 LGQGAFGPVYKATM-------PSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRL-HHRN 174
LG+GAFG V A P+ A+K+L SD+ + + + +E+ ++ + H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSL---------SNLIYSEERVLNWEERL------QI 219
++NL+G C G +I E+ S G+L L YS N EE+L
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE----EVFDGRNSG 275
A ++ G+EYL A IHRDL + N+L+ K+ADFGL+++ + + +G
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 276 LKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT---AIHPHQNLMEYVNLASMSQDG 332
+ ++ P + +T +SD++SFGV+++E+ T + +P + E L
Sbjct: 254 -RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR- 311
Query: 333 VDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+DK C EL + C H P +RP+ ++ + L +I
Sbjct: 312 ----MDKP--SNC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 137/289 (47%), Gaps = 47/289 (16%)
Query: 125 LGQGAFGPVYKATM-------PSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRL-HHRN 174
LG+GAFG V A P+ A+K+L SD+ + + + +E+ ++ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLS---------------NLIYSEERVLNWEERLQI 219
++NL+G C G +I E+ S G+L N ++ E L+ ++ +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE----EVFDGRNSG 275
A ++ G+EYL A IHRDL + N+L+ K+ADFGL+++ + + +G
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 276 LKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT---AIHPHQNLMEYVNLASMSQDG 332
+ ++ P + +T +SD++SFGV+++E+ T + +P + E L
Sbjct: 213 -RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR- 270
Query: 333 VDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+DK C EL + C H P +RP+ ++ + L +I
Sbjct: 271 ----MDKP--SNC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 117/283 (41%), Gaps = 21/283 (7%)
Query: 98 TSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPS-----GGVAAIKVLASD 152
++AP A IP + LG+G F ++ + G K L
Sbjct: 2 SAAPPAKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK 61
Query: 153 SHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLN 212
HQ EK E+S+ L H+++V G+ D ++ E SL L + + L
Sbjct: 62 PHQREK-MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALT 119
Query: 213 WEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG- 271
E I G +YLH V IHRDLK N+ L+ + K+ DFGL+ + +DG
Sbjct: 120 EPEARYYLRQIVLGCQYLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 176
Query: 272 RNSGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQD 331
R L GT YI P +S + + D++S G I++ L+ P + S ++
Sbjct: 177 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE--------TSCLKE 228
Query: 332 GVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEV 374
I + +I V A + K L P RP+I E+
Sbjct: 229 TYLRIKKNEYSIPKHINPVA--ASLIQKMLQTDPTARPTINEL 269
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 135/294 (45%), Gaps = 40/294 (13%)
Query: 112 KDIQKATQNFTNILGQGAFGPVYKATM--PSGG----VAAIKVLASDSHQG--EKEFQTE 163
K+I + F LG+ FG VYK + P+ G AIK L D +G +EF+ E
Sbjct: 21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDKAEGPLREEFRHE 79
Query: 164 VSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIY---------------SEE 208
L RL H N+V L+G +I+ + S+G L + + +
Sbjct: 80 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 139
Query: 209 RVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEV 268
L + + + I+ G+EYL V+H+DL + N+L+ + K++D GL + EV
Sbjct: 140 SALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFR-EV 195
Query: 269 FDGRNSGLKGT----YGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVN 324
+ L G ++ P I KF++ SDI+S+GV+++E+ + L Y
Sbjct: 196 YAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS-----YGLQPYCG 250
Query: 325 LASMSQDGVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
+ +QD V+ I ++Q++ C + + +C ++ P +RP ++ L
Sbjct: 251 YS--NQDVVEMIRNRQVL-PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 301
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 135/294 (45%), Gaps = 40/294 (13%)
Query: 112 KDIQKATQNFTNILGQGAFGPVYKATM--PSGG----VAAIKVLASDSHQG--EKEFQTE 163
K+I + F LG+ FG VYK + P+ G AIK L D +G +EF+ E
Sbjct: 4 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDKAEGPLREEFRHE 62
Query: 164 VSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIY---------------SEE 208
L RL H N+V L+G +I+ + S+G L + + +
Sbjct: 63 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 122
Query: 209 RVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEV 268
L + + + I+ G+EYL V+H+DL + N+L+ + K++D GL + EV
Sbjct: 123 SALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFR-EV 178
Query: 269 FDGRNSGLKGT----YGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVN 324
+ L G ++ P I KF++ SDI+S+GV+++E+ + L Y
Sbjct: 179 YAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS-----YGLQPYCG 233
Query: 325 LASMSQDGVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
+ +QD V+ I ++Q++ C + + +C ++ P +RP ++ L
Sbjct: 234 YS--NQDVVEMIRNRQVL-PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 284
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 128/274 (46%), Gaps = 32/274 (11%)
Query: 125 LGQGAFGPVYKATM-------PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
LGQG+FG VY+ P VA V + S + EF E S++ + ++V
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYS------EERVL---NWEERLQIALDISHGIE 228
L+G ++I E M+ G L + + S VL + + +Q+A +I+ G+
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 229 YLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE-EVFDGRNSGLKGTYG--YIDP 285
YL+ +HRDL + N ++ K+ DFG++++ D G KG ++ P
Sbjct: 138 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 194
Query: 286 AYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVGA 344
+ FT SD++SFGV+++E+ T A P+Q L L + + G +LDK
Sbjct: 195 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG---LLDKP--DN 249
Query: 345 CNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
C + EL R+ C P+ RPS E+ ++
Sbjct: 250 CP-DMLLELMRM---CWQYNPKMRPSFLEIISSI 279
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 9/220 (4%)
Query: 101 PSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQG-EK 158
P A PR+ + + +F ++LG GAF V A + + AIK +A + +G E
Sbjct: 2 PGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEG 61
Query: 159 EFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQ 218
+ E+++L ++ H N+V L G LI + +S G L + I E+ + +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV-EKGFYTERDASR 120
Query: 219 IALDISHGIEYLHEGAVPPVIHRDLKSANIL---LDHFMRAKVADFGLSKEEVFDGRNSG 275
+ + ++YLH+ + +HRDLK N+L LD + ++DFGLSK E S
Sbjct: 121 LIFQVLDAVKYLHDLGI---VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST 177
Query: 276 LKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHP 315
GT GY+ P ++ ++ D +S GVI + L+ P
Sbjct: 178 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 135/289 (46%), Gaps = 47/289 (16%)
Query: 125 LGQGAFGPVYKATM-------PSGGVA-AIKVLASDSHQGE-KEFQTEVSLLGRL-HHRN 174
LG+GAFG V A P V A+K+L D+ + + + +E+ ++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLI---------YS------EERVLNWEERLQI 219
++NL+G C G +I E+ S G+L + YS E + +++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE----EVFDGRNSG 275
++ G+EYL A IHRDL + N+L+ K+ADFGL+++ + + +G
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 276 LKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT---AIHPHQNLMEYVNLASMSQDG 332
+ ++ P + +T +SD++SFGV+++E+ T + +P + E L
Sbjct: 220 -RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR- 277
Query: 333 VDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+DK C EL + C H P +RP+ ++ + L +I
Sbjct: 278 ----MDKP--ANC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 115/257 (44%), Gaps = 21/257 (8%)
Query: 124 ILGQGAFGPVYKAT-MPSGGVAAIKVLASD----SHQGEKEFQTEVSLLGRLHHRNLVNL 178
LG+G F Y+ T M + V A KV+ HQ EK TE+++ L + ++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLDNPHVVGF 107
Query: 179 IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPV 238
G+ D ++ E SL L + V E R + I G++YLH V
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-QGVQYLHNNRV--- 163
Query: 239 IHRDLKSANILLDHFMRAKVADFGLSKEEVFDG-RNSGLKGTYGYIDPAYISTNKFTMKS 297
IHRDLK N+ L+ M K+ DFGL+ + FDG R L GT YI P + + +
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEV 223
Query: 298 DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVRELARIG 357
DI+S G I++ L+ P + S ++ I + +I V + +
Sbjct: 224 DIWSLGCILYTLLVGKPPFET--------SCLKETYIRIKKNEYSVPRHINPV--ASALI 273
Query: 358 HKCLHKTPRKRPSIGEV 374
+ LH P RPS+ E+
Sbjct: 274 RRMLHADPTLRPSVAEL 290
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 128/274 (46%), Gaps = 32/274 (11%)
Query: 125 LGQGAFGPVYKATM-------PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
LGQG+FG VY+ P VA V + S + EF E S++ + ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYS------EERVL---NWEERLQIALDISHGIE 228
L+G ++I E M+ G L + + S VL + + +Q+A +I+ G+
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 229 YLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE-EVFDGRNSGLKGTYG--YIDP 285
YL+ +HRDL + N ++ K+ DFG++++ D G KG ++ P
Sbjct: 147 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 203
Query: 286 AYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVGA 344
+ FT SD++SFGV+++E+ T A P+Q L L + + G +LDK
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG---LLDKP--DN 258
Query: 345 CNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
C + EL R+ C P+ RPS E+ ++
Sbjct: 259 CP-DMLFELMRM---CWQYNPKMRPSFLEIISSI 288
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 134/288 (46%), Gaps = 45/288 (15%)
Query: 125 LGQGAFGPVYKATM-------PSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRL-HHRN 174
LG+GAFG V A P+ A+K+L SD+ + + + +E+ ++ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLS---------------NLIYSEERVLNWEERLQI 219
++NL+G C G +I E+ S G+L N ++ E L+ ++ +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE-EVFDGRNSGLKG 278
A ++ G+EYL A IHRDL + N+L+ K+ADFGL+++ D G
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 279 --TYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT---AIHPHQNLMEYVNLASMSQDGV 333
++ P + +T +SD++SFGV+++E+ T + +P + E L
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR-- 270
Query: 334 DEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+DK C EL + C H P +RP+ ++ + L +I
Sbjct: 271 ---MDKP--SNC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 115/257 (44%), Gaps = 21/257 (8%)
Query: 124 ILGQGAFGPVYKAT-MPSGGVAAIKVLASD----SHQGEKEFQTEVSLLGRLHHRNLVNL 178
LG+G F Y+ T M + V A KV+ HQ EK TE+++ L + ++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLDNPHVVGF 107
Query: 179 IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPV 238
G+ D ++ E SL L + V E R + I G++YLH V
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-QGVQYLHNNRV--- 163
Query: 239 IHRDLKSANILLDHFMRAKVADFGLSKEEVFDG-RNSGLKGTYGYIDPAYISTNKFTMKS 297
IHRDLK N+ L+ M K+ DFGL+ + FDG R L GT YI P + + +
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEV 223
Query: 298 DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVRELARIG 357
DI+S G I++ L+ P + S ++ I + +I V + +
Sbjct: 224 DIWSLGCILYTLLVGKPPFET--------SCLKETYIRIKKNEYSVPRHINPV--ASALI 273
Query: 358 HKCLHKTPRKRPSIGEV 374
+ LH P RPS+ E+
Sbjct: 274 RRMLHADPTLRPSVAEL 290
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 115/257 (44%), Gaps = 21/257 (8%)
Query: 124 ILGQGAFGPVYKAT-MPSGGVAAIKVLASD----SHQGEKEFQTEVSLLGRLHHRNLVNL 178
LG+G F Y+ T M + V A KV+ HQ EK TE+++ L + ++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLDNPHVVGF 107
Query: 179 IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPV 238
G+ D ++ E SL L + V E R + I G++YLH V
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-QGVQYLHNNRV--- 163
Query: 239 IHRDLKSANILLDHFMRAKVADFGLSKEEVFDG-RNSGLKGTYGYIDPAYISTNKFTMKS 297
IHRDLK N+ L+ M K+ DFGL+ + FDG R L GT YI P + + +
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEV 223
Query: 298 DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVRELARIG 357
DI+S G I++ L+ P + S ++ I + +I V + +
Sbjct: 224 DIWSLGCILYTLLVGKPPFET--------SCLKETYIRIKKNEYSVPRHINPV--ASALI 273
Query: 358 HKCLHKTPRKRPSIGEV 374
+ LH P RPS+ E+
Sbjct: 274 RRMLHADPTLRPSVAEL 290
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 115/257 (44%), Gaps = 21/257 (8%)
Query: 124 ILGQGAFGPVYKAT-MPSGGVAAIKVLASD----SHQGEKEFQTEVSLLGRLHHRNLVNL 178
LG+G F Y+ T M + V A KV+ HQ EK TE+++ L + ++V
Sbjct: 33 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEK-MSTEIAIHKSLDNPHVVGF 91
Query: 179 IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPV 238
G+ D ++ E SL L + V E R + I G++YLH V
Sbjct: 92 HGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-QGVQYLHNNRV--- 147
Query: 239 IHRDLKSANILLDHFMRAKVADFGLSKEEVFDG-RNSGLKGTYGYIDPAYISTNKFTMKS 297
IHRDLK N+ L+ M K+ DFGL+ + FDG R L GT YI P + + +
Sbjct: 148 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEV 207
Query: 298 DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVRELARIG 357
DI+S G I++ L+ P + S ++ I + +I V + +
Sbjct: 208 DIWSLGCILYTLLVGKPPFE--------TSCLKETYIRIKKNEYSVPRHINPV--ASALI 257
Query: 358 HKCLHKTPRKRPSIGEV 374
+ LH P RPS+ E+
Sbjct: 258 RRMLHADPTLRPSVAEL 274
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 106/214 (49%), Gaps = 9/214 (4%)
Query: 107 PRYAYKDIQKATQNFTNILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQG-EKEFQTEV 164
PR+ + + +F ++LG GAF V A + + AIK +A ++ +G E + E+
Sbjct: 8 PRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEI 67
Query: 165 SLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDIS 224
++L ++ H N+V L G LI + +S G L + I E+ + ++ +
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV-EKGFYTERDASRLIFQVL 126
Query: 225 HGIEYLHEGAVPPVIHRDLKSANIL---LDHFMRAKVADFGLSKEEVFDGRNSGLKGTYG 281
++YLH+ + +HRDLK N+L LD + ++DFGLSK E S GT G
Sbjct: 127 DAVKYLHDLGI---VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPG 183
Query: 282 YIDPAYISTNKFTMKSDIFSFGVIIFELITAIHP 315
Y+ P ++ ++ D +S GVI + L+ P
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 135/289 (46%), Gaps = 47/289 (16%)
Query: 125 LGQGAFGPVYKATM-------PSGGVA-AIKVLASDSHQGE-KEFQTEVSLLGRL-HHRN 174
LG+GAFG V A P V A+K+L D+ + + + +E+ ++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLI-----------YSEERV----LNWEERLQI 219
++NL+G C G +I E+ S G+L + Y RV + +++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE----EVFDGRNSG 275
++ G+EYL A IHRDL + N+L+ ++ADFGL+++ + + +G
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 276 LKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT---AIHPHQNLMEYVNLASMSQDG 332
+ ++ P + +T +SD++SFGV+++E+ T + +P + E L
Sbjct: 220 -RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR- 277
Query: 333 VDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+DK C EL + C H P +RP+ ++ + L +I
Sbjct: 278 ----MDKP--ANC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 106/214 (49%), Gaps = 9/214 (4%)
Query: 107 PRYAYKDIQKATQNFTNILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQG-EKEFQTEV 164
PR+ + + +F ++LG GAF V A + + AIK +A ++ +G E + E+
Sbjct: 8 PRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEI 67
Query: 165 SLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDIS 224
++L ++ H N+V L G LI + +S G L + I E+ + ++ +
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV-EKGFYTERDASRLIFQVL 126
Query: 225 HGIEYLHEGAVPPVIHRDLKSANIL---LDHFMRAKVADFGLSKEEVFDGRNSGLKGTYG 281
++YLH+ + +HRDLK N+L LD + ++DFGLSK E S GT G
Sbjct: 127 DAVKYLHDLGI---VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPG 183
Query: 282 YIDPAYISTNKFTMKSDIFSFGVIIFELITAIHP 315
Y+ P ++ ++ D +S GVI + L+ P
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 129/275 (46%), Gaps = 34/275 (12%)
Query: 125 LGQGAFGPVYKATM-------PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
LGQG+FG VY+ P VA V + S + EF E S++ + ++V
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVL---------NWEERLQIALDISHGIE 228
L+G ++I E M+ G L + + S + + + +Q+A +I+ G+
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 229 YLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVF--DGRNSGLKGTYG--YID 284
YL+ +HRDL + N ++ K+ DFG++++ ++ D G KG ++
Sbjct: 143 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRD-IYETDYYRKGGKGLLPVRWMS 198
Query: 285 PAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVG 343
P + FT SD++SFGV+++E+ T A P+Q L L + + G +LDK
Sbjct: 199 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG---LLDKP--D 253
Query: 344 ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
C + EL R+ C P+ RPS E+ ++
Sbjct: 254 NCP-DMLFELMRM---CWQYNPKMRPSFLEIISSI 284
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 106/214 (49%), Gaps = 9/214 (4%)
Query: 107 PRYAYKDIQKATQNFTNILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQG-EKEFQTEV 164
PR+ + + +F ++LG GAF V A + + AIK +A ++ +G E + E+
Sbjct: 8 PRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEI 67
Query: 165 SLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDIS 224
++L ++ H N+V L G LI + +S G L + I E+ + ++ +
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV-EKGFYTERDASRLIFQVL 126
Query: 225 HGIEYLHEGAVPPVIHRDLKSANIL---LDHFMRAKVADFGLSKEEVFDGRNSGLKGTYG 281
++YLH+ + +HRDLK N+L LD + ++DFGLSK E S GT G
Sbjct: 127 DAVKYLHDLGI---VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPG 183
Query: 282 YIDPAYISTNKFTMKSDIFSFGVIIFELITAIHP 315
Y+ P ++ ++ D +S GVI + L+ P
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 129/275 (46%), Gaps = 34/275 (12%)
Query: 125 LGQGAFGPVYKATM-------PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
LGQG+FG VY+ P VA V + S + EF E S++ + ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVL---------NWEERLQIALDISHGIE 228
L+G ++I E M+ G L + + S + + + +Q+A +I+ G+
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 229 YLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVF--DGRNSGLKGTYG--YID 284
YL+ +HRDL + N ++ K+ DFG++++ ++ D G KG ++
Sbjct: 153 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRD-IYETDYYRKGGKGLLPVRWMS 208
Query: 285 PAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVG 343
P + FT SD++SFGV+++E+ T A P+Q L L + + G +LDK
Sbjct: 209 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG---LLDKP--D 263
Query: 344 ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
C + EL R+ C P+ RPS E+ ++
Sbjct: 264 NCP-DMLFELMRM---CWQYNPKMRPSFLEIISSI 294
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 134/289 (46%), Gaps = 47/289 (16%)
Query: 125 LGQGAFGPVYKATM-------PSGGVA-AIKVLASDSHQGE-KEFQTEVSLLGRL-HHRN 174
LG+G FG V A P V A+K+L D+ + + + +E+ ++ + H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLI-----------YSEERV----LNWEERLQI 219
++NL+G C G +I E+ S G+L + Y RV + +++ +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE----EVFDGRNSG 275
++ G+EYL A IHRDL + N+L+ K+ADFGL+++ + + +G
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 276 LKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT---AIHPHQNLMEYVNLASMSQDG 332
+ ++ P + +T +SD++SFGV+++E+ T + +P + E L
Sbjct: 207 -RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR- 264
Query: 333 VDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+DK C EL + C H P +RP+ ++ + L +I
Sbjct: 265 ----MDKP--ANC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 303
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 134/289 (46%), Gaps = 47/289 (16%)
Query: 125 LGQGAFGPVYKATM-------PSGGVA-AIKVLASDSHQGE-KEFQTEVSLLGRL-HHRN 174
LG+G FG V A P V A+K+L D+ + + + +E+ ++ + H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLI-----------YSEERV----LNWEERLQI 219
++NL+G C G +I E+ S G+L + Y RV + +++ +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE----EVFDGRNSG 275
++ G+EYL A IHRDL + N+L+ K+ADFGL+++ + + +G
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 276 LKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT---AIHPHQNLMEYVNLASMSQDG 332
+ ++ P + +T +SD++SFGV+++E+ T + +P + E L
Sbjct: 212 -RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR- 269
Query: 333 VDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+DK C EL + C H P +RP+ ++ + L +I
Sbjct: 270 ----MDKP--ANC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 308
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 134/289 (46%), Gaps = 47/289 (16%)
Query: 125 LGQGAFGPVYKATM-------PSGGVA-AIKVLASDSHQGE-KEFQTEVSLLGRL-HHRN 174
LG+G FG V A P V A+K+L D+ + + + +E+ ++ + H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLI-----------YSEERV----LNWEERLQI 219
++NL+G C G +I E+ S G+L + Y RV + +++ +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE----EVFDGRNSG 275
++ G+EYL A IHRDL + N+L+ K+ADFGL+++ + + +G
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 276 LKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT---AIHPHQNLMEYVNLASMSQDG 332
+ ++ P + +T +SD++SFGV+++E+ T + +P + E L
Sbjct: 209 -RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR- 266
Query: 333 VDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+DK C EL + C H P +RP+ ++ + L +I
Sbjct: 267 ----MDKP--ANC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 305
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 134/289 (46%), Gaps = 47/289 (16%)
Query: 125 LGQGAFGPVYKATM-------PSGGVA-AIKVLASDSHQGE-KEFQTEVSLLGRL-HHRN 174
LG+G FG V A P V A+K+L D+ + + + +E+ ++ + H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLI-----------YSEERV----LNWEERLQI 219
++NL+G C G +I E+ S G+L + Y RV + +++ +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE----EVFDGRNSG 275
++ G+EYL A IHRDL + N+L+ K+ADFGL+++ + + +G
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 276 LKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT---AIHPHQNLMEYVNLASMSQDG 332
+ ++ P + +T +SD++SFGV+++E+ T + +P + E L
Sbjct: 266 -RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR- 323
Query: 333 VDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+DK C EL + C H P +RP+ ++ + L +I
Sbjct: 324 ----MDKP--ANC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 125/289 (43%), Gaps = 58/289 (20%)
Query: 124 ILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYC 182
++G G FG V+KA G I+ + ++ + E+E V L +L H N+V+ G C
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIVHYNG-C 73
Query: 183 VD-----------------------------KGKYMLI-YEFMSNGSLSNLIYSEERVLN 212
D K K + I EF G+L I + R
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEK 132
Query: 213 WEERLQIAL--DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFD 270
++ L + L I+ G++Y+H +IHRDLK +NI L + K+ DFGL D
Sbjct: 133 LDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKND 189
Query: 271 GRNSGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQ 330
G+ + KGT Y+ P IS+ + + D+++ G+I+ EL +H E + +
Sbjct: 190 GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL---LHVCDTAFETSKFFTDLR 246
Query: 331 DG-VDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
DG + +I DK+ + K L K P RP+ E+ + L
Sbjct: 247 DGIISDIFDKK------------EKTLLQKLLSKKPEDRPNTSEILRTL 283
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 130/275 (47%), Gaps = 34/275 (12%)
Query: 125 LGQGAFGPVYKATM-------PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
LGQG+FG VY+ P VA V + S + EF E S++ + ++V
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYS------EERVL---NWEERLQIALDISHGIE 228
L+G ++I E M+ G L + + S VL + + +Q+A +I+ G+
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 229 YLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVF--DGRNSGLKGTYG--YID 284
YL+ +HRDL + N ++ K+ DFG++++ ++ D G KG ++
Sbjct: 144 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRD-IYETDYYRKGGKGLLPVRWMS 199
Query: 285 PAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVG 343
P + FT SD++SFGV+++E+ T A P+Q L L + + G +LDK
Sbjct: 200 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG---LLDKP--D 254
Query: 344 ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
C + EL R+ C P+ RPS E+ ++
Sbjct: 255 NCP-DMLFELMRM---CWQYNPKMRPSFLEIISSI 285
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 130/275 (47%), Gaps = 34/275 (12%)
Query: 125 LGQGAFGPVYKATM-------PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
LGQG+FG VY+ P VA V + S + EF E S++ + ++V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYS------EERVL---NWEERLQIALDISHGIE 228
L+G ++I E M+ G L + + S VL + + +Q+A +I+ G+
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 229 YLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVF--DGRNSGLKGTYG--YID 284
YL+ +HRDL + N ++ K+ DFG++++ ++ D G KG ++
Sbjct: 146 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRD-IYETDYYRKGGKGLLPVRWMS 201
Query: 285 PAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVG 343
P + FT SD++SFGV+++E+ T A P+Q L L + + G +LDK
Sbjct: 202 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG---LLDKP--D 256
Query: 344 ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
C + EL R+ C P+ RPS E+ ++
Sbjct: 257 NCP-DMLFELMRM---CWQYNPKMRPSFLEIISSI 287
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 130/275 (47%), Gaps = 34/275 (12%)
Query: 125 LGQGAFGPVYKATM-------PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
LGQG+FG VY+ P VA V + S + EF E S++ + ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYS------EERVL---NWEERLQIALDISHGIE 228
L+G ++I E M+ G L + + S VL + + +Q+A +I+ G+
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 229 YLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVF--DGRNSGLKGTYG--YID 284
YL+ +HRDL + N ++ K+ DFG++++ ++ D G KG ++
Sbjct: 147 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRD-IYETDYYRKGGKGLLPVRWMS 202
Query: 285 PAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVG 343
P + FT SD++SFGV+++E+ T A P+Q L L + + G +LDK
Sbjct: 203 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG---LLDKP--D 257
Query: 344 ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
C + EL R+ C P+ RPS E+ ++
Sbjct: 258 NCP-DMLFELMRM---CWQYNPKMRPSFLEIISSI 288
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 130/275 (47%), Gaps = 34/275 (12%)
Query: 125 LGQGAFGPVYKATM-------PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
LGQG+FG VY+ P VA V + S + EF E S++ + ++V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYS------EERVL---NWEERLQIALDISHGIE 228
L+G ++I E M+ G L + + S VL + + +Q+A +I+ G+
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 229 YLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVF--DGRNSGLKGTYG--YID 284
YL+ +HRDL + N ++ K+ DFG++++ ++ D G KG ++
Sbjct: 146 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRD-IYETDYYRKGGKGLLPVRWMS 201
Query: 285 PAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVG 343
P + FT SD++SFGV+++E+ T A P+Q L L + + G +LDK
Sbjct: 202 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG---LLDKP--D 256
Query: 344 ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
C + EL R+ C P+ RPS E+ ++
Sbjct: 257 NCP-DMLFELMRM---CWQYNPKMRPSFLEIISSI 287
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 119/259 (45%), Gaps = 22/259 (8%)
Query: 123 NILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGE---KEFQTEVSLLGRLHHRNLVNL 178
N+LG+G+F VY+A ++ +G AIK++ + + Q EV + +L H +++ L
Sbjct: 17 NLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILEL 76
Query: 179 IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPV 238
Y D L+ E NG ++ + + + + E I G+ YLH +
Sbjct: 77 YNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGI--- 133
Query: 239 IHRDLKSANILLDHFMRAKVADFGLSKE-EVFDGRNSGLKGTYGYIDPAYISTNKFTMKS 297
+HRDL +N+LL M K+ADFGL+ + ++ ++ L GT YI P + + ++S
Sbjct: 134 LHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLES 193
Query: 298 DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVR--ELAR 355
D++S G + + L+ P D V L+K ++ + E
Sbjct: 194 DVWSLGCMFYTLLIGRPP------------FDTDTVKNTLNKVVLADYEMPSFLSIEAKD 241
Query: 356 IGHKCLHKTPRKRPSIGEV 374
+ H+ L + P R S+ V
Sbjct: 242 LIHQLLRRNPADRLSLSSV 260
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 131/282 (46%), Gaps = 40/282 (14%)
Query: 124 ILGQGAFGPVYKATMPSGGVAAIKV------LASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
ILG+G FG V + + ++KV L + S + +EF +E + + H N++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 178 LIGYCVDKG-----KYMLIYEFMSNGSL-SNLIYSE----ERVLNWEERLQIALDISHGI 227
L+G C++ K M+I FM G L + L+YS + + + L+ +DI+ G+
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 228 EYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG----RNSGLKGTYGYI 283
EYL +HRDL + N +L M VADFGLSK +++ G + K +I
Sbjct: 161 EYLSNRNF---LHRDLAARNCMLRDDMTVCVADFGLSK-KIYSGDYYRQGRIAKMPVKWI 216
Query: 284 DPAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLV 342
++ +T KSD+++FGV ++E+ T + P+ + + E+ D L
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH------------EMYDYLLH 264
Query: 343 GACNIQE---VRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
G Q + EL I + C P RP+ + L K+
Sbjct: 265 GHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKL 306
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 130/275 (47%), Gaps = 34/275 (12%)
Query: 125 LGQGAFGPVYKATM-------PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
LGQG+FG VY+ P VA V + S + EF E S++ + ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYS------EERVL---NWEERLQIALDISHGIE 228
L+G ++I E M+ G L + + S VL + + +Q+A +I+ G+
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 229 YLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVF--DGRNSGLKGTYG--YID 284
YL+ +HRDL + N ++ K+ DFG++++ ++ D G KG ++
Sbjct: 140 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRD-IYETDYYRKGGKGLLPVRWMS 195
Query: 285 PAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVG 343
P + FT SD++SFGV+++E+ T A P+Q L L + + G +LDK
Sbjct: 196 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG---LLDKP--D 250
Query: 344 ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
C + EL R+ C P+ RPS E+ ++
Sbjct: 251 NCP-DMLFELMRM---CWQYNPKMRPSFLEIISSI 281
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 134/289 (46%), Gaps = 47/289 (16%)
Query: 125 LGQGAFGPVYKATM-------PSGGVA-AIKVLASDSHQGE-KEFQTEVSLLGRL-HHRN 174
LG+GAFG V A P V A+K+L D+ + + + +E+ ++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLI-----------YSEERV----LNWEERLQI 219
++ L+G C G +I E+ S G+L + Y RV + +++ +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE----EVFDGRNSG 275
++ G+EYL A IHRDL + N+L+ K+ADFGL+++ + + +G
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 276 LKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT---AIHPHQNLMEYVNLASMSQDG 332
+ ++ P + +T +SD++SFGV+++E+ T + +P + E L
Sbjct: 220 -RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR- 277
Query: 333 VDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+DK C EL + C H P +RP+ ++ + L +I
Sbjct: 278 ----MDKP--ANC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATMPSGG-VAAIKVLASDSHQGEKEFQTEVSLLGRLH 171
D + NF I G+G+ G V AT+ S G + A+K + Q + EV ++
Sbjct: 26 DPRSYLDNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ 84
Query: 172 HRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLH 231
H N+V + + + ++ EF+ G+L++++ +N E+ + L + + LH
Sbjct: 85 HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH 142
Query: 232 EGAVPPVIHRDLKSANILLDHFMRAKVADFG----LSKEEVFDGRNSGLKGTYGYIDPAY 287
V IHRD+KS +ILL H R K++DFG +SKE R L GT ++ P
Sbjct: 143 AQGV---IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---PRRKXLVGTPYWMAPEL 196
Query: 288 ISTNKFTMKSDIFSFGVIIFELITAIHPHQN 318
IS + + DI+S G+++ E++ P+ N
Sbjct: 197 ISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 227
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 130/275 (47%), Gaps = 34/275 (12%)
Query: 125 LGQGAFGPVYKATM-------PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
LGQG+FG VY+ P VA V + S + EF E S++ + ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYS------EERVL---NWEERLQIALDISHGIE 228
L+G ++I E M+ G L + + S VL + + +Q+A +I+ G+
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 229 YLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVF--DGRNSGLKGTYG--YID 284
YL+ +HRDL + N ++ K+ DFG++++ ++ D G KG ++
Sbjct: 153 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRD-IYETDYYRKGGKGLLPVRWMS 208
Query: 285 PAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVG 343
P + FT SD++SFGV+++E+ T A P+Q L L + + G +LDK
Sbjct: 209 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG---LLDKP--D 263
Query: 344 ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
C + EL R+ C P+ RPS E+ ++
Sbjct: 264 NCP-DMLFELMRM---CWQYNPKMRPSFLEIISSI 294
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATMPSGG-VAAIKVLASDSHQGEKEFQTEVSLLGRLH 171
D + NF I G+G+ G V AT+ S G + A+K + Q + EV ++
Sbjct: 28 DPRSYLDNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ 86
Query: 172 HRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLH 231
H N+V + + + ++ EF+ G+L++++ +N E+ + L + + LH
Sbjct: 87 HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH 144
Query: 232 EGAVPPVIHRDLKSANILLDHFMRAKVADFG----LSKEEVFDGRNSGLKGTYGYIDPAY 287
V IHRD+KS +ILL H R K++DFG +SKE R L GT ++ P
Sbjct: 145 AQGV---IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---PRRKXLVGTPYWMAPEL 198
Query: 288 ISTNKFTMKSDIFSFGVIIFELITAIHPHQN 318
IS + + DI+S G+++ E++ P+ N
Sbjct: 199 ISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 229
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 134/289 (46%), Gaps = 47/289 (16%)
Query: 125 LGQGAFGPVYKATM-------PSGGVA-AIKVLASDSHQGE-KEFQTEVSLLGRL-HHRN 174
LG+GAFG V A P V A+K+L D+ + + + +E+ ++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLI-----------YSEERV----LNWEERLQI 219
++NL+G C G +I + S G+L + Y RV + +++ +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE----EVFDGRNSG 275
++ G+EYL A IHRDL + N+L+ K+ADFGL+++ + + +G
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 276 LKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT---AIHPHQNLMEYVNLASMSQDG 332
+ ++ P + +T +SD++SFGV+++E+ T + +P + E L
Sbjct: 220 -RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR- 277
Query: 333 VDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+DK C EL + C H P +RP+ ++ + L +I
Sbjct: 278 ----MDKP--ANC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 135/289 (46%), Gaps = 47/289 (16%)
Query: 125 LGQGAFGPVYKATM-------PSGGVA-AIKVLASDSHQGE-KEFQTEVSLLGRL-HHRN 174
LG+GAFG V A P V A+K+L D+ + + + +E+ ++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLI-----------YSEERV----LNWEERLQI 219
+++L+G C G +I E+ S G+L + Y RV + +++ +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE----EVFDGRNSG 275
++ G+EYL A IHRDL + N+L+ K+ADFGL+++ + + +G
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 276 LKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT---AIHPHQNLMEYVNLASMSQDG 332
+ ++ P + +T +SD++SFGV+++E+ T + +P + E L
Sbjct: 220 -RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR- 277
Query: 333 VDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+DK C EL + C H P +RP+ ++ + L +I
Sbjct: 278 ----MDKP--ANC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 130/275 (47%), Gaps = 34/275 (12%)
Query: 125 LGQGAFGPVYKATM-------PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
LGQG+FG VY+ P VA V + S + EF E S++ + ++V
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYS------EERVL---NWEERLQIALDISHGIE 228
L+G ++I E M+ G L + + S VL + + +Q+A +I+ G+
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 229 YLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVF--DGRNSGLKGTYG--YID 284
YL+ +HRDL + N ++ K+ DFG++++ ++ D G KG ++
Sbjct: 175 YLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRD-IYETDYYRKGGKGLLPVRWMS 230
Query: 285 PAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVG 343
P + FT SD++SFGV+++E+ T A P+Q L L + + G +LDK
Sbjct: 231 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG---LLDKP--D 285
Query: 344 ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
C + EL R+ C P+ RPS E+ ++
Sbjct: 286 NCP-DMLFELMRM---CWQYNPKMRPSFLEIISSI 316
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATMPSGG-VAAIKVLASDSHQGEKEFQTEVSLLGRLH 171
D + NF I G+G+ G V AT+ S G + A+K + Q + EV ++
Sbjct: 148 DPRSYLDNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ 206
Query: 172 HRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLH 231
H N+V + + + ++ EF+ G+L++++ +N E+ + L + + LH
Sbjct: 207 HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH 264
Query: 232 EGAVPPVIHRDLKSANILLDHFMRAKVADFG----LSKEEVFDGRNSGLKGTYGYIDPAY 287
V IHRD+KS +ILL H R K++DFG +SKE R L GT ++ P
Sbjct: 265 AQGV---IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---PRRKXLVGTPYWMAPEL 318
Query: 288 ISTNKFTMKSDIFSFGVIIFELITAIHPHQN 318
IS + + DI+S G+++ E++ P+ N
Sbjct: 319 ISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 349
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATMPSGG-VAAIKVLASDSHQGEKEFQTEVSLLGRLH 171
D + NF I G+G+ G V AT+ S G + A+K + Q + EV ++
Sbjct: 21 DPRSYLDNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ 79
Query: 172 HRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLH 231
H N+V + + + ++ EF+ G+L++++ +N E+ + L + + LH
Sbjct: 80 HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH 137
Query: 232 EGAVPPVIHRDLKSANILLDHFMRAKVADFG----LSKEEVFDGRNSGLKGTYGYIDPAY 287
V IHRD+KS +ILL H R K++DFG +SKE R L GT ++ P
Sbjct: 138 AQGV---IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---PRRKXLVGTPYWMAPEL 191
Query: 288 ISTNKFTMKSDIFSFGVIIFELITAIHPHQN 318
IS + + DI+S G+++ E++ P+ N
Sbjct: 192 ISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 222
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATMPSGG-VAAIKVLASDSHQGEKEFQTEVSLLGRLH 171
D + NF I G+G+ G V AT+ S G + A+K + Q + EV ++
Sbjct: 17 DPRSYLDNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ 75
Query: 172 HRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLH 231
H N+V + + + ++ EF+ G+L++++ +N E+ + L + + LH
Sbjct: 76 HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH 133
Query: 232 EGAVPPVIHRDLKSANILLDHFMRAKVADFG----LSKEEVFDGRNSGLKGTYGYIDPAY 287
V IHRD+KS +ILL H R K++DFG +SKE R L GT ++ P
Sbjct: 134 AQGV---IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---PRRKXLVGTPYWMAPEL 187
Query: 288 ISTNKFTMKSDIFSFGVIIFELITAIHPHQN 318
IS + + DI+S G+++ E++ P+ N
Sbjct: 188 ISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 218
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 14/211 (6%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATMPSGG-VAAIKVLASDSHQGEKEFQTEVSLLGRLH 171
D + NF I G+G+ G V AT+ S G + A+K + Q + EV ++
Sbjct: 71 DPRSYLDNFIKI-GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ 129
Query: 172 HRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLH 231
H N+V + + + ++ EF+ G+L++++ +N E+ + L + + LH
Sbjct: 130 HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH 187
Query: 232 EGAVPPVIHRDLKSANILLDHFMRAKVADFG----LSKEEVFDGRNSGLKGTYGYIDPAY 287
V IHRD+KS +ILL H R K++DFG +SKE R L GT ++ P
Sbjct: 188 AQGV---IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---PRRKXLVGTPYWMAPEL 241
Query: 288 ISTNKFTMKSDIFSFGVIIFELITAIHPHQN 318
IS + + DI+S G+++ E++ P+ N
Sbjct: 242 ISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 272
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 134/289 (46%), Gaps = 47/289 (16%)
Query: 125 LGQGAFGPVYKATM-------PSGGVA-AIKVLASDSHQGE-KEFQTEVSLLGRL-HHRN 174
LG+GAFG V A P V A+K+L D+ + + + +E+ ++ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLI-----------YSEERV----LNWEERLQI 219
++NL+G C G +I + S G+L + Y RV + +++ +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE----EVFDGRNSG 275
++ G+EYL A IHRDL + N+L+ K+ADFGL+++ + + +G
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 276 LKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT---AIHPHQNLMEYVNLASMSQDG 332
+ ++ P + +T +SD++SFGV+++E+ T + +P + E L
Sbjct: 220 -RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR- 277
Query: 333 VDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
+DK C EL + C H P +RP+ ++ + L +I
Sbjct: 278 ----MDKP--ANC----TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 129/275 (46%), Gaps = 34/275 (12%)
Query: 125 LGQGAFGPVYKATM-------PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
LGQG+FG VY+ P VA V + S + EF E S++ + ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYS------EERVL---NWEERLQIALDISHGIE 228
L+G ++I E M+ G L + + S VL + + +Q+A +I+ G+
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 229 YLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVF--DGRNSGLKGTYG--YID 284
YL+ +HRDL + N + K+ DFG++++ ++ D G KG ++
Sbjct: 140 YLNANKF---VHRDLAARNCXVAEDFTVKIGDFGMTRD-IYETDYYRKGGKGLLPVRWMS 195
Query: 285 PAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVG 343
P + FT SD++SFGV+++E+ T A P+Q L L + + G +LDK
Sbjct: 196 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG---LLDKP--D 250
Query: 344 ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
C + EL R+ C P+ RPS E+ ++
Sbjct: 251 NCP-DMLLELMRM---CWQYNPKMRPSFLEIISSI 281
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 120/280 (42%), Gaps = 30/280 (10%)
Query: 112 KDIQKATQNFTNILGQGAFGPVYKATM------PSGGVAAIKVLAS-DSHQGEKEFQTEV 164
K++ + LG GAFG VY+ + PS A+K L S Q E +F E
Sbjct: 66 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 125
Query: 165 SLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIY------SEERVLNWEERLQ 218
++ + +H+N+V IG + ++ E M+ G L + + S+ L + L
Sbjct: 126 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 185
Query: 219 IALDISHGIEYLHEGAVPPVIHRDLKSANILLD---HFMRAKVADFGLSKEEVFDG--RN 273
+A DI+ G +YL E IHRD+ + N LL AK+ DFG++++ G R
Sbjct: 186 VARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRK 242
Query: 274 SGLKG-TYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDG 332
G ++ P FT K+D +SFGV+++E+ + + Y+ S S
Sbjct: 243 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--------LGYMPYPSKSNQE 294
Query: 333 VDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIG 372
V E + + RI +C P RP+
Sbjct: 295 VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 334
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 118/274 (43%), Gaps = 33/274 (12%)
Query: 115 QKATQNFT--NILGQGAFGPVYKATMP-SGGVAAIKVL--ASDSHQG-EKEFQTEVSLLG 168
Q A ++F LG+G FG VY A S + A+KVL A G E + + EV +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 169 RLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLI-----YSEERVLNWEERLQIALDI 223
L H N++ L GY D + LI E+ G++ + + E+R + L AL
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYI 283
H + VIHRD+K N+LL K+ADFG S R + L GT Y+
Sbjct: 124 CHSKK---------VIHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRAALCGTLDYL 173
Query: 284 DPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVG 343
P I K D++S GV+ +E + P + A+ QD I +
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--------ANTYQDTYKRISRVEFTF 225
Query: 344 ACNIQE-VRELARIGHKCLHKTPRKRPSIGEVTQ 376
+ E R+L + L P +RP + EV +
Sbjct: 226 PDFVTEGARDLI---SRLLKHNPSQRPMLREVLE 256
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 120/280 (42%), Gaps = 30/280 (10%)
Query: 112 KDIQKATQNFTNILGQGAFGPVYKATM------PSGGVAAIKVLAS-DSHQGEKEFQTEV 164
K++ + LG GAFG VY+ + PS A+K L S Q E +F E
Sbjct: 43 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 102
Query: 165 SLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIY------SEERVLNWEERLQ 218
++ + +H+N+V IG + ++ E M+ G L + + S+ L + L
Sbjct: 103 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 162
Query: 219 IALDISHGIEYLHEGAVPPVIHRDLKSANILLD---HFMRAKVADFGLSKEEVFDG--RN 273
+A DI+ G +YL E IHRD+ + N LL AK+ DFG++++ G R
Sbjct: 163 VARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRK 219
Query: 274 SGLKG-TYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDG 332
G ++ P FT K+D +SFGV+++E+ + + Y+ S S
Sbjct: 220 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--------LGYMPYPSKSNQE 271
Query: 333 VDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIG 372
V E + + RI +C P RP+
Sbjct: 272 VLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 311
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 125/287 (43%), Gaps = 32/287 (11%)
Query: 112 KDIQKATQNFTNILGQGAFGPVYKATM------PSGGVAAIKVLAS-DSHQGEKEFQTEV 164
K++ + LG GAFG VY+ + PS A+K L S Q E +F E
Sbjct: 26 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 85
Query: 165 SLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIY------SEERVLNWEERLQ 218
++ +L+H+N+V IG + ++ E M+ G L + + S+ L + L
Sbjct: 86 LIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 145
Query: 219 IALDISHGIEYLHEGAVPPVIHRDLKSANILLD---HFMRAKVADFGLSKEEVFDG---R 272
+A DI+ G +YL E IHRD+ + N LL AK+ DFG+++ +++ R
Sbjct: 146 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-DIYRASYYR 201
Query: 273 NSGLKG-TYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQD 331
G ++ P FT K+D +SFGV+++E+ + + Y+ S S
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--------LGYMPYPSKSNQ 253
Query: 332 GVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
V E + + RI +C P RP+ + + +
Sbjct: 254 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 125/287 (43%), Gaps = 32/287 (11%)
Query: 112 KDIQKATQNFTNILGQGAFGPVYKATM------PSGGVAAIKVLAS-DSHQGEKEFQTEV 164
K++ + LG GAFG VY+ + PS A+K L S Q E +F E
Sbjct: 40 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 99
Query: 165 SLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIY------SEERVLNWEERLQ 218
++ +L+H+N+V IG + ++ E M+ G L + + S+ L + L
Sbjct: 100 LIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 159
Query: 219 IALDISHGIEYLHEGAVPPVIHRDLKSANILLD---HFMRAKVADFGLSKEEVFDG---R 272
+A DI+ G +YL E IHRD+ + N LL AK+ DFG+++ +++ R
Sbjct: 160 VARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-DIYRASYYR 215
Query: 273 NSGLKG-TYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQD 331
G ++ P FT K+D +SFGV+++E+ + + Y+ S S
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--------LGYMPYPSKSNQ 267
Query: 332 GVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
V E + + RI +C P RP+ + + +
Sbjct: 268 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 125/274 (45%), Gaps = 32/274 (11%)
Query: 125 LGQGAFGPVYKATM-------PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
LGQG+FG VY+ VA V S S + EF E S++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYS--EERVLN-------WEERLQIALDISHGIE 228
L+G +++ E M++G L + + S E N +E +Q+A +I+ G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 229 YLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE-EVFDGRNSGLKGTYG--YIDP 285
YL+ +HRDL + N ++ H K+ DFG++++ D G KG ++ P
Sbjct: 145 YLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 286 AYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVGA 344
+ FT SD++SFGV+++E+ + A P+Q L L + G + D
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN----- 256
Query: 345 CNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
C + V +L R+ C P+ RP+ E+ L
Sbjct: 257 CP-ERVTDLMRM---CWQFNPKMRPTFLEIVNLL 286
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 125/274 (45%), Gaps = 32/274 (11%)
Query: 125 LGQGAFGPVYKATM-------PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
LGQG+FG VY+ VA V S S + EF E S++ ++V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYS--EERVLN-------WEERLQIALDISHGIE 228
L+G +++ E M++G L + + S E N +E +Q+A +I+ G+
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 229 YLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE-EVFDGRNSGLKGTYG--YIDP 285
YL+ +HRDL + N ++ H K+ DFG++++ D G KG ++ P
Sbjct: 142 YLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 286 AYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVGA 344
+ FT SD++SFGV+++E+ + A P+Q L L + G + D
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN----- 253
Query: 345 CNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
C + V +L R+ C P+ RP+ E+ L
Sbjct: 254 CP-ERVTDLMRM---CWQFNPKMRPTFLEIVNLL 283
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 12/210 (5%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQTEVSLLGRLH 171
D ++ NF I G+G+ G V AT +G A+K + Q + EV ++ H
Sbjct: 42 DPREYLANFIKI-GEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYH 100
Query: 172 HRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLH 231
H N+V++ + + ++ EF+ G+L++++ +N E+ + L + + YLH
Sbjct: 101 HDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTR--MNEEQIATVCLSVLRALSYLH 158
Query: 232 EGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE---EVFDGRNSGLKGTYGYIDPAYI 288
V IHRD+KS +ILL R K++DFG + EV + L GT ++ P I
Sbjct: 159 NQGV---IHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV--PKRKXLVGTPYWMAPEVI 213
Query: 289 STNKFTMKSDIFSFGVIIFELITAIHPHQN 318
S + + DI+S G+++ E+I P+ N
Sbjct: 214 SRLPYGTEVDIWSLGIMVIEMIDGEPPYFN 243
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 124/287 (43%), Gaps = 32/287 (11%)
Query: 112 KDIQKATQNFTNILGQGAFGPVYKATM------PSGGVAAIKVLAS-DSHQGEKEFQTEV 164
K++ + LG GAFG VY+ + PS A+K L S Q E +F E
Sbjct: 25 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 84
Query: 165 SLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIY------SEERVLNWEERLQ 218
++ + +H+N+V IG + ++ E M+ G L + + S+ L + L
Sbjct: 85 LIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 144
Query: 219 IALDISHGIEYLHEGAVPPVIHRDLKSANILLD---HFMRAKVADFGLSKEEVFDG---R 272
+A DI+ G +YL E IHRD+ + N LL AK+ DFG++++ ++ R
Sbjct: 145 VARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARD-IYRASYYR 200
Query: 273 NSGLKG-TYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQD 331
G ++ P FT K+D +SFGV+++E+ + + Y+ S S
Sbjct: 201 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--------LGYMPYPSKSNQ 252
Query: 332 GVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
V E + + RI +C P RP+ + + +
Sbjct: 253 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 299
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 124/287 (43%), Gaps = 32/287 (11%)
Query: 112 KDIQKATQNFTNILGQGAFGPVYKATM------PSGGVAAIKVLAS-DSHQGEKEFQTEV 164
K++ + LG GAFG VY+ + PS A+K L S Q E +F E
Sbjct: 17 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 76
Query: 165 SLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIY------SEERVLNWEERLQ 218
++ + +H+N+V IG + ++ E M+ G L + + S+ L + L
Sbjct: 77 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 136
Query: 219 IALDISHGIEYLHEGAVPPVIHRDLKSANILLD---HFMRAKVADFGLSKEEVFDG---R 272
+A DI+ G +YL E IHRD+ + N LL AK+ DFG++++ ++ R
Sbjct: 137 VARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARD-IYRASYYR 192
Query: 273 NSGLKG-TYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQD 331
G ++ P FT K+D +SFGV+++E+ + + Y+ S S
Sbjct: 193 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--------LGYMPYPSKSNQ 244
Query: 332 GVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
V E + + RI +C P RP+ + + +
Sbjct: 245 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 291
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 120/260 (46%), Gaps = 21/260 (8%)
Query: 125 LGQGAFGPVYKATMPSGGVAA----IKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIG 180
+G+G F VY+A GV +++ + + E+ LL +L+H N++
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIY---SEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
++ + ++ E G LS +I ++R++ + + + +E++H V
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRV-- 157
Query: 238 VIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSG---LKGTYGYIDPAYISTNKFT 294
+HRD+K AN+ + K+ D GL + F + + L GT Y+ P I N +
Sbjct: 158 -MHRDIKPANVFITATGVVKLGDLGLGR--FFSSKTTAAHSLVGTPYYMSPERIHENGYN 214
Query: 295 MKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVRELA 354
KSDI+S G +++E+ P + +NL S+ + +++ L +E+R+L
Sbjct: 215 FKSDIWSLGCLLYEMAALQSPFYG--DKMNLYSLCKK-IEQCDYPPLPSDHYSEELRQLV 271
Query: 355 RIGHKCLHKTPRKRPSIGEV 374
+ C++ P KRP + V
Sbjct: 272 NM---CINPDPEKRPDVTYV 288
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 124/287 (43%), Gaps = 32/287 (11%)
Query: 112 KDIQKATQNFTNILGQGAFGPVYKATM------PSGGVAAIKVLAS-DSHQGEKEFQTEV 164
K++ + LG GAFG VY+ + PS A+K L S Q E +F E
Sbjct: 25 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 84
Query: 165 SLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIY------SEERVLNWEERLQ 218
++ + +H+N+V IG + ++ E M+ G L + + S+ L + L
Sbjct: 85 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 144
Query: 219 IALDISHGIEYLHEGAVPPVIHRDLKSANILLD---HFMRAKVADFGLSKEEVFDG---R 272
+A DI+ G +YL E IHRD+ + N LL AK+ DFG++++ ++ R
Sbjct: 145 VARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARD-IYRASYYR 200
Query: 273 NSGLKG-TYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQD 331
G ++ P FT K+D +SFGV+++E+ + + Y+ S S
Sbjct: 201 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--------LGYMPYPSKSNQ 252
Query: 332 GVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
V E + + RI +C P RP+ + + +
Sbjct: 253 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 299
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 124/287 (43%), Gaps = 32/287 (11%)
Query: 112 KDIQKATQNFTNILGQGAFGPVYKATM------PSGGVAAIKVLAS-DSHQGEKEFQTEV 164
K++ + LG GAFG VY+ + PS A+K L S Q E +F E
Sbjct: 32 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 91
Query: 165 SLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIY------SEERVLNWEERLQ 218
++ + +H+N+V IG + ++ E M+ G L + + S+ L + L
Sbjct: 92 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 151
Query: 219 IALDISHGIEYLHEGAVPPVIHRDLKSANILLD---HFMRAKVADFGLSKEEVFDG---R 272
+A DI+ G +YL E IHRD+ + N LL AK+ DFG++++ ++ R
Sbjct: 152 VARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARD-IYRASYYR 207
Query: 273 NSGLKG-TYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQD 331
G ++ P FT K+D +SFGV+++E+ + + Y+ S S
Sbjct: 208 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--------LGYMPYPSKSNQ 259
Query: 332 GVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
V E + + RI +C P RP+ + + +
Sbjct: 260 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 306
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 121/281 (43%), Gaps = 32/281 (11%)
Query: 112 KDIQKATQNFTNILGQGAFGPVYKATM------PSGGVAAIKVLAS-DSHQGEKEFQTEV 164
K++ + LG GAFG VY+ + PS A+K L S Q E +F E
Sbjct: 52 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 111
Query: 165 SLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIY------SEERVLNWEERLQ 218
++ + +H+N+V IG + ++ E M+ G L + + S+ L + L
Sbjct: 112 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 171
Query: 219 IALDISHGIEYLHEGAVPPVIHRDLKSANILLD---HFMRAKVADFGLSKEEVFDG---R 272
+A DI+ G +YL E IHRD+ + N LL AK+ DFG++++ ++ R
Sbjct: 172 VARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARD-IYRASYYR 227
Query: 273 NSGLKG-TYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQD 331
G ++ P FT K+D +SFGV+++E+ + + Y+ S S
Sbjct: 228 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--------LGYMPYPSKSNQ 279
Query: 332 GVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIG 372
V E + + RI +C P RP+
Sbjct: 280 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 320
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 125/292 (42%), Gaps = 32/292 (10%)
Query: 112 KDIQKATQNFTNILGQGAFGPVYKATM------PSGGVAAIKVLAS-DSHQGEKEFQTEV 164
K++ + LG GAFG VY+ + PS A+K L S Q E +F E
Sbjct: 40 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 99
Query: 165 SLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIY------SEERVLNWEERLQ 218
++ + +H+N+V IG + ++ E M+ G L + + S+ L + L
Sbjct: 100 LIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 159
Query: 219 IALDISHGIEYLHEGAVPPVIHRDLKSANILLD---HFMRAKVADFGLSKEEVFDG---R 272
+A DI+ G +YL E IHRD+ + N LL AK+ DFG++++ ++ R
Sbjct: 160 VARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARD-IYRASYYR 215
Query: 273 NSGLKG-TYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQD 331
G ++ P FT K+D +SFGV+++E+ + + Y+ S S
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--------LGYMPYPSKSNQ 267
Query: 332 GVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQ 383
V E + + RI +C P RP+ + + + Q
Sbjct: 268 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 319
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 121/275 (44%), Gaps = 29/275 (10%)
Query: 112 KDIQKATQNFT--NILGQGAFGPVYKA-TMPSGGVAAIKVL--ASDSHQG-EKEFQTEVS 165
K Q A ++F LG+G FG VY A S + A+KVL A G E + + EV
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL---D 222
+ L H N++ L GY D + LI E+ G +Y E + L+ + + A +
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGE----VYKELQKLSKFDEQRTATYITE 121
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+++ + Y H V IHRD+K N+LL K+ADFG S R L GT Y
Sbjct: 122 LANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRXXLXGTLDY 177
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLV 342
+ P I K D++S GV+ +E + P + A+ Q+ I +
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--------ANTYQETYKRISRVEFT 229
Query: 343 GACNIQE-VRELARIGHKCLHKTPRKRPSIGEVTQ 376
+ E R+L + L P +RP + EV +
Sbjct: 230 FPDFVTEGARDLI---SRLLKHNPSQRPMLREVLE 261
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 124/287 (43%), Gaps = 32/287 (11%)
Query: 112 KDIQKATQNFTNILGQGAFGPVYKATM------PSGGVAAIKVLAS-DSHQGEKEFQTEV 164
K++ + LG GAFG VY+ + PS A+K L S Q E +F E
Sbjct: 26 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 85
Query: 165 SLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIY------SEERVLNWEERLQ 218
++ + +H+N+V IG + ++ E M+ G L + + S+ L + L
Sbjct: 86 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 145
Query: 219 IALDISHGIEYLHEGAVPPVIHRDLKSANILLD---HFMRAKVADFGLSKEEVFDG---R 272
+A DI+ G +YL E IHRD+ + N LL AK+ DFG++++ ++ R
Sbjct: 146 VARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARD-IYRASYYR 201
Query: 273 NSGLKG-TYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQD 331
G ++ P FT K+D +SFGV+++E+ + + Y+ S S
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--------LGYMPYPSKSNQ 253
Query: 332 GVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
V E + + RI +C P RP+ + + +
Sbjct: 254 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 122/275 (44%), Gaps = 29/275 (10%)
Query: 112 KDIQKATQNFT--NILGQGAFGPVYKA-TMPSGGVAAIKVL--ASDSHQG-EKEFQTEVS 165
K Q A ++F LG+G FG VY A S + A+KVL A G E + + EV
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL---D 222
+ L H N++ L GY D + LI E+ G +Y E + L+ + + A +
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGE----VYKELQKLSKFDEQRTATYITE 121
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+++ + Y H V IHRD+K N+LL K+ADFG S R + L GT Y
Sbjct: 122 LANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTTLCGTLDY 177
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLV 342
+ P I K D++S GV+ +E + P + A+ Q+ I +
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--------ANTYQETYKRISRVEFT 229
Query: 343 GACNIQE-VRELARIGHKCLHKTPRKRPSIGEVTQ 376
+ E R+L + L P +RP + EV +
Sbjct: 230 FPDFVTEGARDLI---SRLLKHNPSQRPMLREVLE 261
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 123/275 (44%), Gaps = 29/275 (10%)
Query: 112 KDIQKATQNFT--NILGQGAFGPVYKA-TMPSGGVAAIKVL--ASDSHQG-EKEFQTEVS 165
K Q A ++F LG+G FG VY A S + A+KVL A G E + + EV
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL---D 222
+ L H N++ L GY D + LI E+ G+ +Y E + L+ + + A +
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITE 117
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+++ + Y H V IHRD+K N+LL K+ADFG S R + L GT Y
Sbjct: 118 LANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSCHAP-SSRRTTLSGTLDY 173
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLV 342
+ P I K D++S GV+ +E + P + A+ Q+ I +
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--------ANTYQETYKRISRVEFT 225
Query: 343 GACNIQE-VRELARIGHKCLHKTPRKRPSIGEVTQ 376
+ E R+L + L P +RP + EV +
Sbjct: 226 FPDFVTEGARDLI---SRLLKHNPSQRPMLREVLE 257
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 121/281 (43%), Gaps = 32/281 (11%)
Query: 112 KDIQKATQNFTNILGQGAFGPVYKATM------PSGGVAAIKVLAS-DSHQGEKEFQTEV 164
K++ + LG GAFG VY+ + PS A+K L S Q E +F E
Sbjct: 42 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 101
Query: 165 SLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIY------SEERVLNWEERLQ 218
++ + +H+N+V IG + ++ E M+ G L + + S+ L + L
Sbjct: 102 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 161
Query: 219 IALDISHGIEYLHEGAVPPVIHRDLKSANILLD---HFMRAKVADFGLSKEEVFDG---R 272
+A DI+ G +YL E IHRD+ + N LL AK+ DFG++++ ++ R
Sbjct: 162 VARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARD-IYRASYYR 217
Query: 273 NSGLKG-TYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQD 331
G ++ P FT K+D +SFGV+++E+ + + Y+ S S
Sbjct: 218 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--------LGYMPYPSKSNQ 269
Query: 332 GVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIG 372
V E + + RI +C P RP+
Sbjct: 270 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 310
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 118/277 (42%), Gaps = 33/277 (11%)
Query: 112 KDIQKATQNFT--NILGQGAFGPVYKA-TMPSGGVAAIKVL--ASDSHQG-EKEFQTEVS 165
K Q A ++F LG+G FG VY A S + A+KVL A G E + + EV
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLI-----YSEERVLNWEERLQIA 220
+ L H N++ L GY D + LI E+ G++ + + E+R + L A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 221 LDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
L H VIHRD+K N+LL K+ADFG S R + L GT
Sbjct: 126 LSYCHSKR---------VIHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTTLCGTL 175
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQ 340
Y+ P I K D++S GV+ +E + P + A+ Q+ I +
Sbjct: 176 DYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFE--------ANTYQETYKRISRVE 227
Query: 341 LVGACNIQE-VRELARIGHKCLHKTPRKRPSIGEVTQ 376
+ E R+L + L P +RP + EV +
Sbjct: 228 FTFPDFVTEGARDLI---SRLLKHNPSQRPXLREVLE 261
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 32/274 (11%)
Query: 125 LGQGAFGPVYKATM-------PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
LGQG+FG VY+ VA V S S + EF E S++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYS--EERVLN-------WEERLQIALDISHGIE 228
L+G +++ E M++G L + + S E N +E +Q+A +I+ G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 229 YLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE-EVFDGRNSGLKGTYG--YIDP 285
YL+ +HRDL + N ++ H K+ DFG++++ D G KG ++ P
Sbjct: 145 YLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 286 AYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVGA 344
+ FT SD++SFGV+++E+ + A P+Q L L + G + D
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN----- 256
Query: 345 CNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
C + V +L R+ C P RP+ E+ L
Sbjct: 257 CP-ERVTDLMRM---CWQFNPNMRPTFLEIVNLL 286
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 121/281 (43%), Gaps = 32/281 (11%)
Query: 112 KDIQKATQNFTNILGQGAFGPVYKATM------PSGGVAAIKVLAS-DSHQGEKEFQTEV 164
K++ + LG GAFG VY+ + PS A+K L S Q E +F E
Sbjct: 26 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEA 85
Query: 165 SLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIY------SEERVLNWEERLQ 218
++ + +H+N+V IG + ++ E M+ G L + + S+ L + L
Sbjct: 86 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 145
Query: 219 IALDISHGIEYLHEGAVPPVIHRDLKSANILLD---HFMRAKVADFGLSKEEVFDG---R 272
+A DI+ G +YL E IHRD+ + N LL AK+ DFG++ ++++ R
Sbjct: 146 VARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMA-QDIYRASYYR 201
Query: 273 NSGLKG-TYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQD 331
G ++ P FT K+D +SFGV+++E+ + + Y+ S S
Sbjct: 202 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--------LGYMPYPSKSNQ 253
Query: 332 GVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIG 372
V E + + RI +C P RP+
Sbjct: 254 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 294
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 124/287 (43%), Gaps = 32/287 (11%)
Query: 112 KDIQKATQNFTNILGQGAFGPVYKATM------PSGGVAAIKVLAS-DSHQGEKEFQTEV 164
K++ + LG GAFG VY+ + PS A+K L S Q E +F E
Sbjct: 40 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEA 99
Query: 165 SLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIY------SEERVLNWEERLQ 218
++ + +H+N+V IG + ++ E M+ G L + + S+ L + L
Sbjct: 100 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 159
Query: 219 IALDISHGIEYLHEGAVPPVIHRDLKSANILLD---HFMRAKVADFGLSKEEVFDG---R 272
+A DI+ G +YL E IHRD+ + N LL AK+ DFG++++ ++ R
Sbjct: 160 VARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARD-IYRASYYR 215
Query: 273 NSGLKG-TYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQD 331
G ++ P FT K+D +SFGV+++E+ + + Y+ S S
Sbjct: 216 KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--------LGYMPYPSKSNQ 267
Query: 332 GVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
V E + + RI +C P RP+ + + +
Sbjct: 268 EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 96/200 (48%), Gaps = 15/200 (7%)
Query: 125 LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQG---EKEFQTEVSLLGRLHHRNLVNLIG 180
LG+G FG VY A S + A+KVL + E + + EV + L H N++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL---DISHGIEYLHEGAVPP 237
Y D + LI E+ G+ +Y E + L+ + + A ++++ + Y H V
Sbjct: 80 YFHDATRVYLILEYAPLGT----VYRELQKLSRFDEQRTATYITELANALSYCHSKRV-- 133
Query: 238 VIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKS 297
IHRD+K N+LL K+ADFG S R + L GT Y+ P I K
Sbjct: 134 -IHRDIKPENLLLGSNGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMHDEKV 191
Query: 298 DIFSFGVIIFELITAIHPHQ 317
D++S GV+ +E + + P +
Sbjct: 192 DLWSLGVLCYEFLVGMPPFE 211
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 123/275 (44%), Gaps = 29/275 (10%)
Query: 112 KDIQKATQNFT--NILGQGAFGPVYKA-TMPSGGVAAIKVL--ASDSHQG-EKEFQTEVS 165
K Q A ++F LG+G FG VY A S + A+KVL A G E + + EV
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL---D 222
+ L H N++ L GY D + LI E+ G+ +Y E + L+ + + A +
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITE 117
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+++ + Y H V IHRD+K N+LL K+ADFG S R + L GT Y
Sbjct: 118 LANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTDLCGTLDY 173
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLV 342
+ P I K D++S GV+ +E + P + A+ Q+ I +
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--------ANTYQETYKRISRVEFT 225
Query: 343 GACNIQE-VRELARIGHKCLHKTPRKRPSIGEVTQ 376
+ E R+L + L P +RP + EV +
Sbjct: 226 FPDFVTEGARDLI---SRLLKHNPSQRPMLREVLE 257
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 117/274 (42%), Gaps = 33/274 (12%)
Query: 115 QKATQNFT--NILGQGAFGPVYKA-TMPSGGVAAIKVL--ASDSHQG-EKEFQTEVSLLG 168
Q A ++F LG+G FG VY A S + A+KVL A G E + + EV +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 169 RLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLI-----YSEERVLNWEERLQIALDI 223
L H N++ L GY D + LI E+ G++ + + E+R + L AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYI 283
H VIHRD+K N+LL K+ADFG S R + L GT Y+
Sbjct: 124 CHSKR---------VIHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRAALCGTLDYL 173
Query: 284 DPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVG 343
P I K D++S GV+ +E + P + A+ Q+ I +
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--------ANTYQETYKRISRVEFTF 225
Query: 344 ACNIQE-VRELARIGHKCLHKTPRKRPSIGEVTQ 376
+ E R+L + L P +RP + EV +
Sbjct: 226 PDFVTEGARDLI---SRLLKHNPSQRPMLREVLE 256
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 102/215 (47%), Gaps = 17/215 (7%)
Query: 112 KDIQKATQNFT--NILGQGAFGPVYKA-TMPSGGVAAIKVL--ASDSHQG-EKEFQTEVS 165
K Q A ++F LG+G FG VY A S + A+KVL A G E + + EV
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL---D 222
+ L H N++ L GY D + LI E+ G+ +Y E + L+ + + A +
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITE 142
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+++ + Y H V IHRD+K N+LL K+ADFG S R + L GT Y
Sbjct: 143 LANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTLCGTLDY 198
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQ 317
+ P I K D++S GV+ +E + P +
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 118/277 (42%), Gaps = 33/277 (11%)
Query: 112 KDIQKATQNFT--NILGQGAFGPVYKA-TMPSGGVAAIKVL--ASDSHQG-EKEFQTEVS 165
K Q A ++F LG+G FG VY A S + A+KVL A G E + + EV
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLI-----YSEERVLNWEERLQIA 220
+ L H N++ L GY D + LI E+ G++ + + E+R + L A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 221 LDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
L H VIHRD+K N+LL K+ADFG S R + L GT
Sbjct: 121 LSYCHSKR---------VIHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTDLCGTL 170
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQ 340
Y+ P I K D++S GV+ +E + P + A+ Q+ I +
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--------ANTYQETYKRISRVE 222
Query: 341 LVGACNIQE-VRELARIGHKCLHKTPRKRPSIGEVTQ 376
+ E R+L + L P +RP + EV +
Sbjct: 223 FTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVLE 256
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 113/279 (40%), Gaps = 21/279 (7%)
Query: 102 SASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPS-----GGVAAIKVLASDSHQG 156
A IP + LG+G F ++ + G K L HQ
Sbjct: 2 PAKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQR 61
Query: 157 EKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEER 216
EK E+S+ L H+++V G+ D ++ E SL L + + L E
Sbjct: 62 EK-MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEA 119
Query: 217 LQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG-RNSG 275
I G +YLH V IHRDLK N+ L+ + K+ DFGL+ + +DG R
Sbjct: 120 RYYLRQIVLGCQYLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT 176
Query: 276 LKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDE 335
L GT YI P +S + + D++S G I++ L+ P + S ++
Sbjct: 177 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE--------TSCLKETYLR 228
Query: 336 ILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEV 374
I + +I V A + K L P RP+I E+
Sbjct: 229 IKKNEYSIPKHINPVA--ASLIQKMLQTDPTARPTINEL 265
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 113/279 (40%), Gaps = 21/279 (7%)
Query: 102 SASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPS-----GGVAAIKVLASDSHQG 156
A IP + LG+G F ++ + G K L HQ
Sbjct: 2 PAKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQR 61
Query: 157 EKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEER 216
EK E+S+ L H+++V G+ D ++ E SL L + + L E
Sbjct: 62 EK-MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEA 119
Query: 217 LQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG-RNSG 275
I G +YLH V IHRDLK N+ L+ + K+ DFGL+ + +DG R
Sbjct: 120 RYYLRQIVLGCQYLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT 176
Query: 276 LKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDE 335
L GT YI P +S + + D++S G I++ L+ P + S ++
Sbjct: 177 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE--------TSCLKETYLR 228
Query: 336 ILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEV 374
I + +I V A + K L P RP+I E+
Sbjct: 229 IKKNEYSIPKHINPVA--ASLIQKMLQTDPTARPTINEL 265
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 112/262 (42%), Gaps = 31/262 (11%)
Query: 125 LGQGAFGPVYKA-TMPSGGVAAIKVL--ASDSHQG-EKEFQTEVSLLGRLHHRNLVNLIG 180
LG+G FG VY A S + A+KVL A G E + + EV + L H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLI-----YSEERVLNWEERLQIALDISHGIEYLHEGAV 235
Y D + LI E+ G++ + + E+R + L AL H
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR------- 131
Query: 236 PPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTM 295
VIHRD+K N+LL K+ADFG S R + L GT Y+ P I
Sbjct: 132 --VIHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRAALCGTLDYLPPEMIEGRMHDE 188
Query: 296 KSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE-VRELA 354
K D++S GV+ +E + P + A+ Q+ I + + E R+L
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFE--------ANTYQETYKRISRVEFTFPDFVTEGARDLI 240
Query: 355 RIGHKCLHKTPRKRPSIGEVTQ 376
+ L P +RP + EV +
Sbjct: 241 ---SRLLKHNPSQRPMLREVLE 259
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 118/277 (42%), Gaps = 33/277 (11%)
Query: 112 KDIQKATQNFT--NILGQGAFGPVYKA-TMPSGGVAAIKVL--ASDSHQG-EKEFQTEVS 165
K Q A ++F LG+G FG VY A S + A+KVL A G E + + EV
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLI-----YSEERVLNWEERLQIA 220
+ L H N++ L GY D + LI E+ G++ + + E+R + L A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 221 LDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
L H VIHRD+K N+LL K+ADFG S R + L GT
Sbjct: 124 LSYCHSKR---------VIHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTTLCGTL 173
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQ 340
Y+ P I K D++S GV+ +E + P + A+ Q+ I +
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--------ANTYQETYKRISRVE 225
Query: 341 LVGACNIQE-VRELARIGHKCLHKTPRKRPSIGEVTQ 376
+ E R+L + L P +RP + EV +
Sbjct: 226 FTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVLE 259
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 123/275 (44%), Gaps = 29/275 (10%)
Query: 112 KDIQKATQNFT--NILGQGAFGPVYKA-TMPSGGVAAIKVL--ASDSHQG-EKEFQTEVS 165
K Q A ++F LG+G FG VY A S + A+KVL A G E + + EV
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL---D 222
+ L H N++ L GY D + LI E+ G+ +Y E + L+ + + A +
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITE 119
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+++ + Y H V IHRD+K N+LL K+ADFG S R + L GT Y
Sbjct: 120 LANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTTLCGTLDY 175
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLV 342
+ P I K D++S GV+ +E + P + A+ Q+ I +
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--------ANTYQETYKRISRVEFT 227
Query: 343 GACNIQE-VRELARIGHKCLHKTPRKRPSIGEVTQ 376
+ E R+L + L P +RP + EV +
Sbjct: 228 FPDFVTEGARDLI---SRLLKHNPSQRPMLREVLE 259
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 127/275 (46%), Gaps = 34/275 (12%)
Query: 125 LGQGAFGPVYKATM-------PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
LGQG+FG VY+ VA V S S + EF E S++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYS--EERVLN-------WEERLQIALDISHGIE 228
L+G +++ E M++G L + + S E N +E +Q+A +I+ G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 229 YLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVF--DGRNSGLKGTYG--YID 284
YL+ +HRDL + N ++ H K+ DFG+++ +++ D G KG ++
Sbjct: 145 YLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTR-DIYETDYYRKGGKGLLPVRWMA 200
Query: 285 PAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVG 343
P + FT SD++SFGV+++E+ + A P+Q L L + G + D
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN---- 256
Query: 344 ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
C + V +L R+ C P+ RP+ E+ L
Sbjct: 257 -CP-ERVTDLMRM---CWQFNPKMRPTFLEIVNLL 286
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 123/275 (44%), Gaps = 29/275 (10%)
Query: 112 KDIQKATQNFT--NILGQGAFGPVYKA-TMPSGGVAAIKVL--ASDSHQG-EKEFQTEVS 165
K Q A ++F LG+G FG VY A S + A+KVL A G E + + EV
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL---D 222
+ L H N++ L GY D + LI E+ G+ +Y E + L+ + + A +
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITE 121
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+++ + Y H V IHRD+K N+LL K+ADFG S R + L GT Y
Sbjct: 122 LANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTDLCGTLDY 177
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLV 342
+ P I K D++S GV+ +E + P + A+ Q+ I +
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--------ANTYQETYKRISRVEFT 229
Query: 343 GACNIQE-VRELARIGHKCLHKTPRKRPSIGEVTQ 376
+ E R+L + L P +RP + EV +
Sbjct: 230 FPDFVTEGARDLI---SRLLKHNPSQRPMLREVLE 261
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 102/215 (47%), Gaps = 17/215 (7%)
Query: 112 KDIQKATQNFT--NILGQGAFGPVYKA-TMPSGGVAAIKVL--ASDSHQG-EKEFQTEVS 165
K Q A ++F LG+G FG VY A S + A+KVL A G E + + EV
Sbjct: 18 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 77
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL---D 222
+ L H N++ L GY D + LI E+ G+ +Y E + L+ + + A +
Sbjct: 78 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITE 133
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+++ + Y H V IHRD+K N+LL K+ADFG S R + L GT Y
Sbjct: 134 LANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRTTLCGTLDY 189
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQ 317
+ P I K D++S GV+ +E + P +
Sbjct: 190 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 9/199 (4%)
Query: 121 FTNILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLI 179
F +LG GAF V+ +G + A+K + + + E+++L ++ H N+V L
Sbjct: 13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLE 72
Query: 180 GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVI 239
Y L+ + +S G L + I E V ++ + + ++YLHE ++
Sbjct: 73 DIYESTTHYYLVMQLVSGGELFDRIL-ERGVYTEKDASLVIQQVLSAVKYLHENG---IV 128
Query: 240 HRDLKSANILL---DHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMK 296
HRDLK N+L + + + DFGLSK E +G S GT GY+ P ++ ++
Sbjct: 129 HRDLKPENLLYLTPEENSKIMITDFGLSKMEQ-NGIMSTACGTPGYVAPEVLAQKPYSKA 187
Query: 297 SDIFSFGVIIFELITAIHP 315
D +S GVI + L+ P
Sbjct: 188 VDCWSIGVITYILLCGYPP 206
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 127/275 (46%), Gaps = 34/275 (12%)
Query: 125 LGQGAFGPVYKATM-------PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
LGQG+FG VY+ VA V S S + EF E S++ ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYS--EERVLN-------WEERLQIALDISHGIE 228
L+G +++ E M++G L + + S E N +E +Q+A +I+ G+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 229 YLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVF--DGRNSGLKGTYG--YID 284
YL+ +HRDL + N ++ H K+ DFG+++ +++ D G KG ++
Sbjct: 144 YLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTR-DIYETDYYRKGGKGLLPVRWMA 199
Query: 285 PAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVG 343
P + FT SD++SFGV+++E+ + A P+Q L L + G + D
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN---- 255
Query: 344 ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
C + V +L R+ C P+ RP+ E+ L
Sbjct: 256 -CP-ERVTDLMRM---CWQFNPKMRPTFLEIVNLL 285
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 125 LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQG---EKEFQTEVSLLGRLHHRNLVNLIG 180
LG+G FG VY A S + A+KVL + E + + EV + L H N++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL---DISHGIEYLHEGAVPP 237
Y D + LI E+ G+ +Y E + L+ + + A ++++ + Y H V
Sbjct: 80 YFHDATRVYLILEYAPLGT----VYRELQKLSRFDEQRTATYITELANALSYCHSKRV-- 133
Query: 238 VIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKS 297
IHRD+K N+LL K+ADFG S R++ L GT Y+ P I K
Sbjct: 134 -IHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT-LCGTLDYLPPEMIEGRMHDEKV 191
Query: 298 DIFSFGVIIFELITAIHPHQ 317
D++S GV+ +E + + P +
Sbjct: 192 DLWSLGVLCYEFLVGMPPFE 211
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 123/275 (44%), Gaps = 29/275 (10%)
Query: 112 KDIQKATQNFT--NILGQGAFGPVYKA-TMPSGGVAAIKVL--ASDSHQG-EKEFQTEVS 165
K Q A ++F LG+G FG VY A S + A+KVL A G E + + EV
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL---D 222
+ L H N++ L GY D + LI E+ G+ +Y E + L+ + + A +
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITE 121
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+++ + Y H V IHRD+K N+LL K+ADFG S R + L GT Y
Sbjct: 122 LANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTTLCGTLDY 177
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLV 342
+ P I K D++S GV+ +E + P + A+ Q+ I +
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--------ANTYQETYKRISRVEFT 229
Query: 343 GACNIQE-VRELARIGHKCLHKTPRKRPSIGEVTQ 376
+ E R+L + L P +RP + EV +
Sbjct: 230 FPDFVTEGARDLI---SRLLKHNPSQRPMLREVLE 261
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 100/198 (50%), Gaps = 9/198 (4%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCV 183
LG+G++G VYKA +G + AIK + +S +E E+S++ + ++V G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDL--QEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 184 DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDL 243
++ E+ GS+S++I + L +E I G+EYLH IHRD+
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDI 151
Query: 244 KSANILLDHFMRAKVADFGLSKE--EVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFS 301
K+ NILL+ AK+ADFG++ + + RN + GT ++ P I + +DI+S
Sbjct: 152 KAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVI-GTPFWMAPEVIQEIGYNCVADIWS 210
Query: 302 FGVIIFELITAIHPHQNL 319
G+ E+ P+ ++
Sbjct: 211 LGITAIEMAEGKPPYADI 228
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 117/274 (42%), Gaps = 33/274 (12%)
Query: 115 QKATQNFT--NILGQGAFGPVYKA-TMPSGGVAAIKVL--ASDSHQG-EKEFQTEVSLLG 168
Q A ++F LG+G FG VY A S + A+KVL A G E + + EV +
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 169 RLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLI-----YSEERVLNWEERLQIALDI 223
L H N++ L GY D + LI E+ G++ + + E+R + L AL
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 122
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYI 283
H VIHRD+K N+LL K+ADFG S R + L GT Y+
Sbjct: 123 CHSKR---------VIHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTTLCGTLDYL 172
Query: 284 DPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVG 343
P I K D++S GV+ +E + P + A+ Q+ I +
Sbjct: 173 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--------ANTYQETYKRISRVEFTF 224
Query: 344 ACNIQE-VRELARIGHKCLHKTPRKRPSIGEVTQ 376
+ E R+L + L P +RP + EV +
Sbjct: 225 PDFVTEGARDLI---SRLLKHNPSQRPMLREVLE 255
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 112/262 (42%), Gaps = 31/262 (11%)
Query: 125 LGQGAFGPVYKA-TMPSGGVAAIKVL--ASDSHQG-EKEFQTEVSLLGRLHHRNLVNLIG 180
LG+G FG VY A S + A+KVL A G E + + EV + L H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLI-----YSEERVLNWEERLQIALDISHGIEYLHEGAV 235
Y D + LI E+ G++ + + E+R + L AL H
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR------- 128
Query: 236 PPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTM 295
VIHRD+K N+LL K+ADFG S R + L GT Y+ P I
Sbjct: 129 --VIHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTDLCGTLDYLPPEMIEGRMHDE 185
Query: 296 KSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE-VRELA 354
K D++S GV+ +E + P + A+ Q+ I + + E R+L
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFE--------ANTYQETYKRISRVEFTFPDFVTEGARDLI 237
Query: 355 RIGHKCLHKTPRKRPSIGEVTQ 376
+ L P +RP + EV +
Sbjct: 238 ---SRLLKHNPSQRPMLREVLE 256
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 117/260 (45%), Gaps = 27/260 (10%)
Query: 125 LGQGAFGPVYKA-TMPSGGVAAIKVL--ASDSHQG-EKEFQTEVSLLGRLHHRNLVNLIG 180
LG+G FG VY A S + A+KVL A G E + + EV + L H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL---DISHGIEYLHEGAVPP 237
Y D + LI E+ G+ +Y E + L+ + + A ++++ + Y H V
Sbjct: 76 YFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANALSYCHSKRV-- 129
Query: 238 VIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKS 297
IHRD+K N+LL K+ADFG S R + L GT Y+ P I K
Sbjct: 130 -IHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTTLCGTLDYLPPEMIEGRMHDEKV 187
Query: 298 DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE-VRELARI 356
D++S GV+ +E + P + A+ Q+ I + + E R+L
Sbjct: 188 DLWSLGVLCYEFLVGKPPFE--------ANTYQETYKRISRVEFTFPDFVTEGARDLI-- 237
Query: 357 GHKCLHKTPRKRPSIGEVTQ 376
+ L P +RP + EV +
Sbjct: 238 -SRLLKHNPSQRPMLREVLE 256
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 130/280 (46%), Gaps = 23/280 (8%)
Query: 105 GIPRYAYKDIQKATQNFTNILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQTE 163
G P+ Y +K +GQGA G VY A + +G AI+ + ++ E
Sbjct: 17 GDPKKKYTRFEK--------IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE 68
Query: 164 VSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDI 223
+ ++ + N+VN + + + ++ E+++ GSL++++ E ++ + + +
Sbjct: 69 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCREC 126
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFD-GRNSGLKGTYGY 282
+E+LH V IHRD+KS NILL K+ DFG + + + S + GT +
Sbjct: 127 LQALEFLHSNQV---IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYW 183
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLV 342
+ P ++ + K DI+S G++ E+I P+ N L ++ +G E+ + + +
Sbjct: 184 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL 243
Query: 343 GACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQ-ALLKI 381
A R+ ++CL KR S E+ Q LKI
Sbjct: 244 SAI----FRDFL---NRCLEMDVEKRGSAKELIQHQFLKI 276
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 101/215 (46%), Gaps = 17/215 (7%)
Query: 112 KDIQKATQNFT--NILGQGAFGPVYKA-TMPSGGVAAIKVL--ASDSHQG-EKEFQTEVS 165
K Q A ++F LG+G FG VY A S + A+KVL A G E + + EV
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL---D 222
+ L H N++ L GY D + LI E+ G+ +Y E + L+ + + A +
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITE 142
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+++ + Y H V IHRD+K N+LL K+ADFG S R L GT Y
Sbjct: 143 LANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV-HAPSSRRDDLCGTLDY 198
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQ 317
+ P I K D++S GV+ +E + P +
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 130/280 (46%), Gaps = 23/280 (8%)
Query: 105 GIPRYAYKDIQKATQNFTNILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQTE 163
G P+ Y +K +GQGA G VY A + +G AI+ + ++ E
Sbjct: 16 GDPKKKYTRFEK--------IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE 67
Query: 164 VSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDI 223
+ ++ + N+VN + + + ++ E+++ GSL++++ E ++ + + +
Sbjct: 68 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCREC 125
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFD-GRNSGLKGTYGY 282
+E+LH V IHRD+KS NILL K+ DFG + + + S + GT +
Sbjct: 126 LQALEFLHSNQV---IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYW 182
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLV 342
+ P ++ + K DI+S G++ E+I P+ N L ++ +G E+ + + +
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL 242
Query: 343 GACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQ-ALLKI 381
A R+ ++CL KR S E+ Q LKI
Sbjct: 243 SAI----FRDFL---NRCLEMDVEKRGSAKELLQHQFLKI 275
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 109/257 (42%), Gaps = 21/257 (8%)
Query: 124 ILGQGAFGPVYKATMPS-----GGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNL 178
LG+G F ++ + G K L HQ EK E+S+ L H+++V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 104
Query: 179 IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPV 238
G+ D ++ E SL L + + L E I G +YLH V
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQYLHRNRV--- 160
Query: 239 IHRDLKSANILLDHFMRAKVADFGLSKEEVFDG-RNSGLKGTYGYIDPAYISTNKFTMKS 297
IHRDLK N+ L+ + K+ DFGL+ + +DG R L GT YI P +S + +
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 220
Query: 298 DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVRELARIG 357
D++S G I++ L+ P + S ++ I + +I V A +
Sbjct: 221 DVWSIGCIMYTLLVGKPPFE--------TSCLKETYLRIKKNEYSIPKHINPVA--ASLI 270
Query: 358 HKCLHKTPRKRPSIGEV 374
K L P RP+I E+
Sbjct: 271 QKMLQTDPTARPTINEL 287
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 126/275 (45%), Gaps = 34/275 (12%)
Query: 125 LGQGAFGPVYKATM-------PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
LGQG+FG VY+ VA V S S + EF E S++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYS--EERVLN-------WEERLQIALDISHGIE 228
L+G +++ E M++G L + + S E N +E +Q+A +I+ G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 229 YLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE--EVFDGRNSGLKGTYG--YID 284
YL+ +HRDL + N ++ H K+ DFG++++ E R G KG ++
Sbjct: 145 YLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGG-KGLLPVRWMA 200
Query: 285 PAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVG 343
P + FT SD++SFGV+++E+ + A P+Q L L + G + D
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN---- 256
Query: 344 ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
C + V +L R+ C P+ RP+ E+ L
Sbjct: 257 -CP-ERVTDLMRM---CWQFNPKMRPTFLEIVNLL 286
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 113/278 (40%), Gaps = 21/278 (7%)
Query: 103 ASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPS-----GGVAAIKVLASDSHQGE 157
A IP + LG+G F ++ + G K L HQ E
Sbjct: 1 AKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQRE 60
Query: 158 KEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERL 217
K E+S+ L H+++V G+ D ++ E SL L + + L E
Sbjct: 61 K-MSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEAR 118
Query: 218 QIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG-RNSGL 276
I G +YLH V IHRDLK N+ L+ + K+ DFGL+ + +DG R L
Sbjct: 119 YYLRQIVLGCQYLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL 175
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEI 336
GT YI P +S + + D++S G I++ L+ P + S ++ I
Sbjct: 176 CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET--------SCLKETYLRI 227
Query: 337 LDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEV 374
+ +I V A + K L P RP+I E+
Sbjct: 228 KKNEYSIPKHINPVA--ASLIQKMLQTDPTARPTINEL 263
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 124/275 (45%), Gaps = 29/275 (10%)
Query: 112 KDIQKATQNFT--NILGQGAFGPVYKA-TMPSGGVAAIKVL--ASDSHQG-EKEFQTEVS 165
K Q A ++F LG+G FG VY A S + A+KVL A G E + + EV
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL---D 222
+ L H N++ L GY D + LI E+ G+ +Y E + L+ + + A +
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITE 117
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+++ + Y H V IHRD+K N+LL K+ADFG S R++ L GT Y
Sbjct: 118 LANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT-LCGTLDY 173
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLV 342
+ P I K D++S GV+ +E + P + A+ Q+ I +
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--------ANTYQETYKRISRVEFT 225
Query: 343 GACNIQE-VRELARIGHKCLHKTPRKRPSIGEVTQ 376
+ E R+L + L P +RP + EV +
Sbjct: 226 FPDFVTEGARDLI---SRLLKHNPSQRPMLREVLE 257
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 117/274 (42%), Gaps = 33/274 (12%)
Query: 115 QKATQNFT--NILGQGAFGPVYKA-TMPSGGVAAIKVL--ASDSHQG-EKEFQTEVSLLG 168
Q A ++F LG+G FG VY A S + A+KVL A G E + + EV +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 169 RLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLI-----YSEERVLNWEERLQIALDI 223
L H N++ L GY D + LI E+ G++ + + E+R + L AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYI 283
H VIHRD+K N+LL K+ADFG S R + L GT Y+
Sbjct: 124 CHSKR---------VIHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTXLCGTLDYL 173
Query: 284 DPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVG 343
P I K D++S GV+ +E + P + A+ Q+ I +
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--------ANTYQETYKRISRVEFTF 225
Query: 344 ACNIQE-VRELARIGHKCLHKTPRKRPSIGEVTQ 376
+ E R+L + L P +RP + EV +
Sbjct: 226 PDFVTEGARDLI---SRLLKHNPSQRPMLREVLE 256
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 117/274 (42%), Gaps = 33/274 (12%)
Query: 115 QKATQNFT--NILGQGAFGPVYKA-TMPSGGVAAIKVL--ASDSHQG-EKEFQTEVSLLG 168
Q A ++F LG+G FG VY A S + A+KVL A G E + + EV +
Sbjct: 8 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 67
Query: 169 RLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLI-----YSEERVLNWEERLQIALDI 223
L H N++ L GY D + LI E+ G++ + + E+R + L AL
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 127
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYI 283
H VIHRD+K N+LL K+ADFG S R + L GT Y+
Sbjct: 128 CHSKR---------VIHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTTLCGTLDYL 177
Query: 284 DPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVG 343
P I K D++S GV+ +E + P + A+ Q+ I +
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--------ANTYQETYKRISRVEFTF 229
Query: 344 ACNIQE-VRELARIGHKCLHKTPRKRPSIGEVTQ 376
+ E R+L + L P +RP + EV +
Sbjct: 230 PDFVTEGARDLI---SRLLKHNPSQRPMLREVLE 260
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 15/213 (7%)
Query: 107 PRYAYKDIQKATQNFTNILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQ---T 162
P+Y+ +D Q LG G+FG V+ + +G A+KVL + K+ +
Sbjct: 1 PKYSLQDFQ-----ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTND 55
Query: 163 EVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALD 222
E +L + H ++ + G D + +I +++ G L +L+ +R N + A +
Sbjct: 56 ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAE 114
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+ +EYLH + I+RDLK NILLD K+ DFG +K L GT Y
Sbjct: 115 VCLALEYLHSKDI---IYRDLKPENILLDKNGHIKITDFGFAK--YVPDVTYXLCGTPDY 169
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELITAIHP 315
I P +ST + D +SFG++I+E++ P
Sbjct: 170 IAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 109/257 (42%), Gaps = 21/257 (8%)
Query: 124 ILGQGAFGPVYKATMPS-----GGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNL 178
LG+G F ++ + G K L HQ EK E+S+ L H+++V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREK-MSMEISIHRSLAHQHVVGF 106
Query: 179 IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPV 238
G+ D ++ E SL L + + L E I G +YLH V
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQYLHRNRV--- 162
Query: 239 IHRDLKSANILLDHFMRAKVADFGLSKEEVFDG-RNSGLKGTYGYIDPAYISTNKFTMKS 297
IHRDLK N+ L+ + K+ DFGL+ + +DG R L GT YI P +S + +
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 222
Query: 298 DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVRELARIG 357
D++S G I++ L+ P + S ++ I + +I V A +
Sbjct: 223 DVWSIGCIMYTLLVGKPPFE--------TSCLKETYLRIKKNEYSIPKHINPVA--ASLI 272
Query: 358 HKCLHKTPRKRPSIGEV 374
K L P RP+I E+
Sbjct: 273 QKMLQTDPTARPTINEL 289
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 130/280 (46%), Gaps = 23/280 (8%)
Query: 105 GIPRYAYKDIQKATQNFTNILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQTE 163
G P+ Y +K +GQGA G VY A + +G AI+ + ++ E
Sbjct: 16 GDPKKKYTRFEK--------IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE 67
Query: 164 VSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDI 223
+ ++ + N+VN + + + ++ E+++ GSL++++ E ++ + + +
Sbjct: 68 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAVCREC 125
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFD-GRNSGLKGTYGY 282
+E+LH V IHRD+KS NILL K+ DFG + + + S + GT +
Sbjct: 126 LQALEFLHSNQV---IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYW 182
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLV 342
+ P ++ + K DI+S G++ E+I P+ N L ++ +G E+ + + +
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL 242
Query: 343 GACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQ-ALLKI 381
A R+ ++CL KR S E+ Q LKI
Sbjct: 243 SAI----FRDFL---NRCLDMDVEKRGSAKELLQHQFLKI 275
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 126/284 (44%), Gaps = 33/284 (11%)
Query: 114 IQKATQNFTNILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGE-KEFQTEVSLLGRLH 171
I + ++G GA V A P AIK + + Q E E+ + + H
Sbjct: 7 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH 66
Query: 172 HRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYS-------EERVLNWEERLQIALDIS 224
H N+V+ V K + L+ + +S GS+ ++I + VL+ I ++
Sbjct: 67 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 225 HGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG---RNSGLK---G 278
G+EYLH+ IHRD+K+ NILL ++ADFG+S G RN K G
Sbjct: 127 EGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 183
Query: 279 TYGYIDPAYISTNK-FTMKSDIFSFGVIIFELITAIHPHQN-------LMEYVNLASMSQ 330
T ++ P + + + K+DI+SFG+ EL T P+ ++ N +
Sbjct: 184 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE 243
Query: 331 DGVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEV 374
GV DK+++ + R++ + CL K P KRP+ E+
Sbjct: 244 TGVQ---DKEMLKKYG-KSFRKMISL---CLQKDPEKRPTAAEL 280
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 121/260 (46%), Gaps = 27/260 (10%)
Query: 76 ASGFPQKKSQVSWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQNFTN------ILGQGA 129
A+G P+ + + S D + P +Q +T F++ +LG+G+
Sbjct: 12 AAGEPRSRGHAAGTSGGPGDHLHATPGMF---------VQHSTAIFSDRYKGQRVLGKGS 62
Query: 130 FGPVYKATMP-SGGVAAIKVLASDS--HQGEKE-FQTEVSLLGRLHHRNLVNLIGYCVDK 185
FG V +G A+KV++ + +KE EV LL +L H N++ L + DK
Sbjct: 63 FGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDK 122
Query: 186 GKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKS 245
G + L+ E + G L + I S +R + + +I + GI Y+H+ ++HRDLK
Sbjct: 123 GYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMHKN---KIVHRDLKP 178
Query: 246 ANILLDHFMR---AKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFSF 302
N+LL+ + ++ DFGLS + GT YI P + + K D++S
Sbjct: 179 ENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH-GTYDEKCDVWST 237
Query: 303 GVIIFELITAIHPHQNLMEY 322
GVI++ L++ P EY
Sbjct: 238 GVILYILLSGCPPFNGANEY 257
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 117/277 (42%), Gaps = 33/277 (11%)
Query: 112 KDIQKATQNFT--NILGQGAFGPVYKA-TMPSGGVAAIKVL--ASDSHQG-EKEFQTEVS 165
K Q A ++F LG+G FG VY A S + A+KVL A G E + + EV
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLI-----YSEERVLNWEERLQIA 220
+ L H N++ L GY D + LI E+ G++ + + E+R + L A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 221 LDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
L H VIHRD+K N+LL K+ADFG S R L GT
Sbjct: 124 LSYCHSKR---------VIHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRXXLCGTL 173
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQ 340
Y+ P I K D++S GV+ +E + P + A+ Q+ I +
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--------ANTYQETYKRISRVE 225
Query: 341 LVGACNIQE-VRELARIGHKCLHKTPRKRPSIGEVTQ 376
+ E R+L + L P +RP + EV +
Sbjct: 226 FTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVLE 259
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 117/260 (45%), Gaps = 27/260 (10%)
Query: 125 LGQGAFGPVYKA-TMPSGGVAAIKVL--ASDSHQG-EKEFQTEVSLLGRLHHRNLVNLIG 180
LG+G FG VY A S + A+KVL A G E + + EV + L H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL---DISHGIEYLHEGAVPP 237
Y D + LI E+ G+ +Y E + L+ + + A ++++ + Y H V
Sbjct: 76 YFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITELANALSYCHSKRV-- 129
Query: 238 VIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKS 297
IHRD+K N+LL K+ADFG S R + L GT Y+ P I K
Sbjct: 130 -IHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTELCGTLDYLPPEMIEGRMHDEKV 187
Query: 298 DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE-VRELARI 356
D++S GV+ +E + P + A+ Q+ I + + E R+L
Sbjct: 188 DLWSLGVLCYEFLVGKPPFE--------ANTYQETYKRISRVEFTFPDFVTEGARDLI-- 237
Query: 357 GHKCLHKTPRKRPSIGEVTQ 376
+ L P +RP + EV +
Sbjct: 238 -SRLLKHNPSQRPMLREVLE 256
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 99/197 (50%), Gaps = 6/197 (3%)
Query: 122 TNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIG 180
T ILG G FG V+K + G+ A K++ + + ++E + E+S++ +L H NL+ L
Sbjct: 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYD 153
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
K +L+ E++ G L + I E L + + I GI ++H+ ++H
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY---ILH 210
Query: 241 RDLKSANILL--DHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSD 298
DLK NIL + K+ DFGL++ + GT ++ P ++ + + +D
Sbjct: 211 LDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTD 270
Query: 299 IFSFGVIIFELITAIHP 315
++S GVI + L++ + P
Sbjct: 271 MWSVGVIAYMLLSGLSP 287
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 121/260 (46%), Gaps = 27/260 (10%)
Query: 76 ASGFPQKKSQVSWWSNHSKDRFTSAPSASGIPRYAYKDIQKATQNFTN------ILGQGA 129
A+G P+ + + S D + P +Q +T F++ +LG+G+
Sbjct: 11 AAGEPRSRGHAAGTSGGPGDHLHATPGMF---------VQHSTAIFSDRYKGQRVLGKGS 61
Query: 130 FGPVYKATMP-SGGVAAIKVLASDS--HQGEKE-FQTEVSLLGRLHHRNLVNLIGYCVDK 185
FG V +G A+KV++ + +KE EV LL +L H N++ L + DK
Sbjct: 62 FGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDK 121
Query: 186 GKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKS 245
G + L+ E + G L + I S +R + + +I + GI Y+H+ ++HRDLK
Sbjct: 122 GYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMHKN---KIVHRDLKP 177
Query: 246 ANILLDHFMR---AKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFSF 302
N+LL+ + ++ DFGLS + GT YI P + + K D++S
Sbjct: 178 ENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH-GTYDEKCDVWST 236
Query: 303 GVIIFELITAIHPHQNLMEY 322
GVI++ L++ P EY
Sbjct: 237 GVILYILLSGCPPFNGANEY 256
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 29/220 (13%)
Query: 114 IQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHR 173
Q + +G FG V+KA + + VA D + E+ EV L + H
Sbjct: 21 FQSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHE 78
Query: 174 NLVNLIG-----YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIE 228
N++ IG VD + LI F GSLS+ + + V++W E IA ++ G+
Sbjct: 79 NILQFIGAEKRGTSVDVDLW-LITAFHEKGSLSDFLKA--NVVSWNELCHIAETMARGLA 135
Query: 229 YLHE-------GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFD-----GRNSGL 276
YLHE G P + HRD+KS N+LL + + A +ADFGL+ + F+ G G
Sbjct: 136 YLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK--FEAGKSAGDTHGQ 193
Query: 277 KGTYGYIDPAYIS-----TNKFTMKSDIFSFGVIIFELIT 311
GT Y+ P + ++ D+++ G++++EL +
Sbjct: 194 VGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 105/235 (44%), Gaps = 43/235 (18%)
Query: 124 ILGQGAFGPVYKA--TMPSGGVAAIKVLASDSHQGEK--EFQTEVSLLGRLHH------- 172
+LGQGAFG V KA + S A K+ H EK +EV LL L+H
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKI----RHTEEKLSTILSEVMLLASLNHQYVVRYY 68
Query: 173 ------RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHG 226
RN V + K + E+ NG+L +LI+SE +E ++ I
Sbjct: 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEA 128
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE-----EVFDGRNSGLKGTYG 281
+ Y+H + IHRDLK NI +D K+ DFGL+K ++ + L G+
Sbjct: 129 LSYIHSQGI---IHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 282 YIDPA-----YISTN------KFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNL 325
+ A Y++T + K D++S G+I FE+ I+P ME VN+
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM---IYPFSTGMERVNI 237
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 122/275 (44%), Gaps = 29/275 (10%)
Query: 112 KDIQKATQNFT--NILGQGAFGPVYKA-TMPSGGVAAIKVL--ASDSHQG-EKEFQTEVS 165
K Q A ++F LG+G FG VY A S + A+KVL A G E + + EV
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL---D 222
+ L H N++ L GY D + LI E+ G+ +Y E + L+ + + A +
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITE 118
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+++ + Y H V IHRD+K N+LL K+ADFG S R L GT Y
Sbjct: 119 LANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRXXLCGTLDY 174
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLV 342
+ P I K D++S GV+ +E + P + A+ Q+ I +
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--------ANTYQETYKRISRVEFT 226
Query: 343 GACNIQE-VRELARIGHKCLHKTPRKRPSIGEVTQ 376
+ E R+L + L P +RP + EV +
Sbjct: 227 FPDFVTEGARDLI---SRLLKHNPSQRPMLREVLE 258
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 12/204 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLAS---DSHQGEKEFQTEVSLLGRLHHRNLVNLIG 180
+G+G F V A + +G A+K++ +S +K F+ EV ++ L+H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
+ L+ E+ S G + + + + R+ E R + I ++Y H+ + +H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKFI---VH 136
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFT-MKSDI 299
RDLK+ N+LLD M K+ADFG S E F + G+ Y P K+ + D+
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDV 196
Query: 300 FSFGVIIFELITAIHPH--QNLME 321
+S GVI++ L++ P QNL E
Sbjct: 197 WSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 130/280 (46%), Gaps = 23/280 (8%)
Query: 105 GIPRYAYKDIQKATQNFTNILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQTE 163
G P+ Y +K +GQGA G VY A + +G AI+ + ++ E
Sbjct: 16 GDPKKKYTRFEK--------IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE 67
Query: 164 VSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDI 223
+ ++ + N+VN + + + ++ E+++ GSL++++ E ++ + + +
Sbjct: 68 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCREC 125
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFD-GRNSGLKGTYGY 282
+E+LH V IHRD+KS NILL K+ DFG + + + S + GT +
Sbjct: 126 LQALEFLHSNQV---IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYW 182
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLV 342
+ P ++ + K DI+S G++ E+I P+ N L ++ +G E+ + + +
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL 242
Query: 343 GACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQ-ALLKI 381
A R+ ++CL KR S E+ Q LKI
Sbjct: 243 SAI----FRDFL---NRCLDMDVEKRGSAKELLQHQFLKI 275
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 12/204 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLAS---DSHQGEKEFQTEVSLLGRLHHRNLVNLIG 180
+G+G F V A + +G A+K++ +S +K F+ EV ++ L+H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
+ L+ E+ S G + + + + R+ E R + I ++Y H+ + +H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKFI---VH 136
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFT-MKSDI 299
RDLK+ N+LLD M K+ADFG S E F + G Y P K+ + D+
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDV 196
Query: 300 FSFGVIIFELITAIHPH--QNLME 321
+S GVI++ L++ P QNL E
Sbjct: 197 WSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 126/284 (44%), Gaps = 33/284 (11%)
Query: 114 IQKATQNFTNILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGE-KEFQTEVSLLGRLH 171
I + ++G GA V A P AIK + + Q E E+ + + H
Sbjct: 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH 71
Query: 172 HRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYS-------EERVLNWEERLQIALDIS 224
H N+V+ V K + L+ + +S GS+ ++I + VL+ I ++
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 225 HGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG---RNSGLK---G 278
G+EYLH+ IHRD+K+ NILL ++ADFG+S G RN K G
Sbjct: 132 EGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 188
Query: 279 TYGYIDPAYISTNK-FTMKSDIFSFGVIIFELITAIHPHQN-------LMEYVNLASMSQ 330
T ++ P + + + K+DI+SFG+ EL T P+ ++ N +
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE 248
Query: 331 DGVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEV 374
GV DK+++ + R++ + CL K P KRP+ E+
Sbjct: 249 TGVQ---DKEMLKKYG-KSFRKMISL---CLQKDPEKRPTAAEL 285
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 116/274 (42%), Gaps = 33/274 (12%)
Query: 115 QKATQNFT--NILGQGAFGPVYKA-TMPSGGVAAIKVL--ASDSHQG-EKEFQTEVSLLG 168
Q A ++F LG+G FG VY A S + A+KVL A G E + + EV +
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 169 RLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLI-----YSEERVLNWEERLQIALDI 223
L H N++ L GY D + LI E+ G++ + + E+R + L AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 126
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYI 283
H VIHRD+K N+LL K+ADFG S R L GT Y+
Sbjct: 127 CHSKR---------VIHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRDDLCGTLDYL 176
Query: 284 DPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVG 343
P I K D++S GV+ +E + P + A+ Q+ I +
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--------ANTYQETYKRISRVEFTF 228
Query: 344 ACNIQE-VRELARIGHKCLHKTPRKRPSIGEVTQ 376
+ E R+L + L P +RP + EV +
Sbjct: 229 PDFVTEGARDLI---SRLLKHNPSQRPMLREVLE 259
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 12/204 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLAS---DSHQGEKEFQTEVSLLGRLHHRNLVNLIG 180
+G+G F V A + +G A+K++ +S +K F+ EV ++ L+H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
+ L+ E+ S G + + + + R+ E R + I ++Y H+ + +H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKFI---VH 136
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFT-MKSDI 299
RDLK+ N+LLD M K+ADFG S E F + G+ Y P K+ + D+
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDV 196
Query: 300 FSFGVIIFELITAIHPH--QNLME 321
+S GVI++ L++ P QNL E
Sbjct: 197 WSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 110/222 (49%), Gaps = 18/222 (8%)
Query: 114 IQKATQNFTN------ILGQGAFGPVYKATMP-SGGVAAIKVLASDS--HQGEKE-FQTE 163
+Q +T F++ +LG+G+FG V +G A+KV++ + +KE E
Sbjct: 23 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 82
Query: 164 VSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDI 223
V LL +L H N++ L + DKG + L+ E + G L + I S +R + + +I +
Sbjct: 83 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQV 141
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMR---AKVADFGLSKEEVFDGRNSGLKGTY 280
GI Y+H+ ++HRDLK N+LL+ + ++ DFGLS + GT
Sbjct: 142 LSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTA 198
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEY 322
YI P + + K D++S GVI++ L++ P EY
Sbjct: 199 YYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEY 239
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 125 LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGE---KEFQTEVSLLGRLHHRNLVNLIG 180
LG+G FG VY A S + A+KVL + E + + E+ + LHH N++ L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 181 YCVDKGKYMLIYEFMSNGSL-----SNLIYSEERVLNWEERLQIALDISHGIEYLHEGAV 235
Y D+ + LI E+ G L + + E+R E L AL HG +
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKK------- 143
Query: 236 PPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTM 295
VIHRD+K N+LL K+ADFG S R + GT Y+ P I
Sbjct: 144 --VIHRDIKPENLLLGLKGELKIADFGWSVHAP-SLRRKTMCGTLDYLPPEMIEGRMHNE 200
Query: 296 KSDIFSFGVIIFELITAIHPHQN 318
K D++ GV+ +EL+ P ++
Sbjct: 201 KVDLWCIGVLCYELLVGNPPFES 223
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 116/274 (42%), Gaps = 33/274 (12%)
Query: 115 QKATQNFT--NILGQGAFGPVYKA-TMPSGGVAAIKVL--ASDSHQG-EKEFQTEVSLLG 168
Q A ++F LG+G FG VY A S + A+KVL A G E + + EV +
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 169 RLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLI-----YSEERVLNWEERLQIALDI 223
L H N++ L GY D + LI E+ G++ + + E+R + L AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYI 283
H VIHRD+K N+LL K+ADFG S R L GT Y+
Sbjct: 124 CHSKR---------VIHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRXXLCGTLDYL 173
Query: 284 DPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVG 343
P I K D++S GV+ +E + P + A+ Q+ I +
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--------ANTYQETYKRISRVEFTF 225
Query: 344 ACNIQE-VRELARIGHKCLHKTPRKRPSIGEVTQ 376
+ E R+L + L P +RP + EV +
Sbjct: 226 PDFVTEGARDLI---SRLLKHNPSQRPMLREVLE 256
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 110/222 (49%), Gaps = 18/222 (8%)
Query: 114 IQKATQNFTN------ILGQGAFGPVYKATMP-SGGVAAIKVLASDS--HQGEKE-FQTE 163
+Q +T F++ +LG+G+FG V +G A+KV++ + +KE E
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 164 VSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDI 223
V LL +L H N++ L + DKG + L+ E + G L + I S +R + + +I +
Sbjct: 77 VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQV 135
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMR---AKVADFGLSKEEVFDGRNSGLKGTY 280
GI Y+H+ ++HRDLK N+LL+ + ++ DFGLS + GT
Sbjct: 136 LSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTA 192
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEY 322
YI P + + K D++S GVI++ L++ P EY
Sbjct: 193 YYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEY 233
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 118/277 (42%), Gaps = 33/277 (11%)
Query: 112 KDIQKATQNFT--NILGQGAFGPVYKA-TMPSGGVAAIKVL--ASDSHQG-EKEFQTEVS 165
K Q A ++F LG+G FG VY A S + A+KVL A G E + + EV
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLI-----YSEERVLNWEERLQIA 220
+ L H N++ L GY D + LI E+ G++ + + E+R + L A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 221 LDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
L H VIHRD+K N+LL K+A+FG S R + L GT
Sbjct: 124 LSYCHSKR---------VIHRDIKPENLLLGSAGELKIANFGWSVHAP-SSRRTTLCGTL 173
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQ 340
Y+ P I K D++S GV+ +E + P + A+ Q+ I +
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--------ANTYQETYKRISRVE 225
Query: 341 LVGACNIQE-VRELARIGHKCLHKTPRKRPSIGEVTQ 376
+ E R+L + L P +RP + EV +
Sbjct: 226 FTFPDFVTEGARDLI---SRLLKHNPSQRPMLREVLE 259
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 123/275 (44%), Gaps = 29/275 (10%)
Query: 112 KDIQKATQNFT--NILGQGAFGPVYKA-TMPSGGVAAIKVL--ASDSHQG-EKEFQTEVS 165
K Q A ++F LG+G FG VY A S + A+KVL A G E + + EV
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL---D 222
+ L H N++ L GY D + LI E+ G+ +Y E + L+ + + A +
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT----VYRELQKLSKFDEQRTATYITE 118
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+++ + Y H V IHRD+K N+LL K+A+FG S R + L GT Y
Sbjct: 119 LANALSYCHSKRV---IHRDIKPENLLLGSAGELKIANFGWSVHAP-SSRRTTLCGTLDY 174
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLV 342
+ P I K D++S GV+ +E + P + A+ Q+ I +
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--------ANTYQETYKRISRVEFT 226
Query: 343 GACNIQE-VRELARIGHKCLHKTPRKRPSIGEVTQ 376
+ E R+L + L P +RP + EV +
Sbjct: 227 FPDFVTEGARDLI---SRLLKHNPSQRPMLREVLE 258
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 115/274 (41%), Gaps = 33/274 (12%)
Query: 115 QKATQNFT--NILGQGAFGPVYKATMPSGG-VAAIKVLASDSHQG---EKEFQTEVSLLG 168
Q A ++F LG+G FG VY A + A+KVL + E + + EV +
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 169 RLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLI-----YSEERVLNWEERLQIALDI 223
L H N++ L GY D + LI E+ G++ + + E+R + L AL
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 120
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYI 283
H VIHRD+K N+LL K+ADFG S R + L GT Y+
Sbjct: 121 CHSKR---------VIHRDIKPENLLLGSAGELKIADFGWSVHAP-SSRRTTLCGTLDYL 170
Query: 284 DPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVG 343
P I K D++S GV+ +E + P + A+ Q+ I +
Sbjct: 171 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--------ANTYQETYKRISRVEFTF 222
Query: 344 ACNIQE-VRELARIGHKCLHKTPRKRPSIGEVTQ 376
+ E R+L + L P +RP + EV +
Sbjct: 223 PDFVTEGARDLI---SRLLKHNPSQRPMLREVLE 253
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 12/204 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLAS---DSHQGEKEFQTEVSLLGRLHHRNLVNLIG 180
+G+G F V A + +G A++++ +S +K F+ EV ++ L+H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
+ L+ E+ S G + + + + R+ E R + I ++Y H+ + +H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKFI---VH 136
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFT-MKSDI 299
RDLK+ N+LLD M K+ADFG S E F + G+ Y P K+ + D+
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDV 196
Query: 300 FSFGVIIFELITAIHPH--QNLME 321
+S GVI++ L++ P QNL E
Sbjct: 197 WSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 130/280 (46%), Gaps = 23/280 (8%)
Query: 105 GIPRYAYKDIQKATQNFTNILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQTE 163
G P+ Y +K +GQGA G VY A + +G AI+ + ++ E
Sbjct: 17 GDPKKKYTRFEK--------IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE 68
Query: 164 VSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDI 223
+ ++ + N+VN + + + ++ E+++ GSL++++ E ++ + + +
Sbjct: 69 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCREC 126
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFD-GRNSGLKGTYGY 282
+E+LH V IHR++KS NILL K+ DFG + + + S + GT +
Sbjct: 127 LQALEFLHSNQV---IHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYW 183
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLV 342
+ P ++ + K DI+S G++ E+I P+ N L ++ +G E+ + + +
Sbjct: 184 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL 243
Query: 343 GACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQ-ALLKI 381
A R+ ++CL KR S E+ Q LKI
Sbjct: 244 SAI----FRDFL---NRCLEMDVEKRGSAKELIQHQFLKI 276
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 12/204 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLAS---DSHQGEKEFQTEVSLLGRLHHRNLVNLIG 180
+G+G F V A + +G AIK++ + +K F+ EV ++ L+H N+V L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 81
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
+ LI E+ S G + + + + R+ E R + I ++Y H+ + +H
Sbjct: 82 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCHQKRI---VH 137
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFT-MKSDI 299
RDLK+ N+LLD M K+ADFG S E G+ G Y P K+ + D+
Sbjct: 138 RDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDV 197
Query: 300 FSFGVIIFELITAIHPH--QNLME 321
+S GVI++ L++ P QNL E
Sbjct: 198 WSLGVILYTLVSGSLPFDGQNLKE 221
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 127/285 (44%), Gaps = 46/285 (16%)
Query: 124 ILGQGAFGPVYKATMPSGG--VAAIKVLASDSHQGEKEF-QTEVSLLGRLHHRNLVNLIG 180
++G+G++G V K G VA K L SD + K+ E+ LL +L H NLVNL+
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
C K ++ L++EF+ + L +L L+++ + I +GI + H +IH
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPNG-LDYQVVQKYLFQIINGIGFCHSHN---IIH 147
Query: 241 RDLKSANILLDHFMRAKVADFGLSKE-----EVFDGRNSGLKGTYGYIDPAYISTN-KFT 294
RD+K NIL+ K+ DFG ++ EV+D + T Y P + + K+
Sbjct: 148 RDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA----TRWYRAPELLVGDVKYG 203
Query: 295 MKSDIFSFGVIIFELITA--IHP--------HQNLMEYVNLASMSQDGVDEILDKQLVGA 344
D+++ G ++ E+ + P + +M NL Q E+ +K V A
Sbjct: 204 KAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQ----ELFNKNPVFA 259
Query: 345 ----CNIQEVRELAR-----------IGHKCLHKTPRKRPSIGEV 374
I+E L R + KCLH P KRP E+
Sbjct: 260 GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAEL 304
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 12/204 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLAS---DSHQGEKEFQTEVSLLGRLHHRNLVNLIG 180
+G+G F V A + +G A++++ +S +K F+ EV ++ L+H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
+ L+ E+ S G + + + + R+ E R + I ++Y H+ + +H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKFI---VH 136
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFT-MKSDI 299
RDLK+ N+LLD M K+ADFG S E F + G+ Y P K+ + D+
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDV 196
Query: 300 FSFGVIIFELITAIHPH--QNLME 321
+S GVI++ L++ P QNL E
Sbjct: 197 WSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 100/196 (51%), Gaps = 14/196 (7%)
Query: 125 LGQGAFGPVYKAT--MPSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLVNLIG 180
LG G FG V + M + AIKVL + + + +E E ++ +L + +V LIG
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
C + ML+ E G L + + + ++ +S G++YL E +H
Sbjct: 78 VCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF---VH 133
Query: 241 RDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYISTNKFTM 295
RDL + N+LL + AK++DFGLSK + + R++G K + P I+ KF+
Sbjct: 134 RDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG-KWPLKWYAPECINFRKFSS 192
Query: 296 KSDIFSFGVIIFELIT 311
+SD++S+GV ++E ++
Sbjct: 193 RSDVWSYGVTMWEALS 208
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 119/263 (45%), Gaps = 22/263 (8%)
Query: 121 FTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLV 176
F +LG+G+FG V A + +G + A+KVL D + + + TE +L + +
Sbjct: 27 FIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFL 86
Query: 177 NLIGYCVD-KGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAV 235
+ C + + EF++ G L I R R A +I + +LH+ +
Sbjct: 87 TQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAA-EIISALMFLHDKGI 145
Query: 236 PPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSG-LKGTYGYIDPAYISTNKFT 294
I+RDLK N+LLDH K+ADFG+ KE + +G + GT YI P + +
Sbjct: 146 ---IYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYG 202
Query: 295 MKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVRELA 354
D ++ GV+++E++ P + A D + IL+ ++V + E +
Sbjct: 203 PAVDWWAMGVLLYEMLCGHAPFE--------AENEDDLFEAILNDEVVYPTWLHE--DAT 252
Query: 355 RIGHKCLHKTPRKRPSIGEVTQA 377
I + K P R +G +TQ
Sbjct: 253 GILKSFMTKNPTMR--LGSLTQG 273
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 134/282 (47%), Gaps = 24/282 (8%)
Query: 100 APSASGIPRYAYKDIQKATQN-FTNI--LGQGAFGPVYKAT-MPSGGVAAIKVL-ASDSH 154
+P SG+P ++++ + FT + +G+G+FG V+K + V AIK++ ++
Sbjct: 4 SPVQSGLP--GMQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE 61
Query: 155 QGEKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWE 214
++ Q E+++L + + G + K +I E++ GS +L+ E L+
Sbjct: 62 DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDET 119
Query: 215 ERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG--R 272
+ I +I G++YLH IHRD+K+AN+LL K+ADFG++ ++ D +
Sbjct: 120 QIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAG-QLTDTQIK 175
Query: 273 NSGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDG 332
+ GT ++ P I + + K+DI+S G+ EL PH L L + ++
Sbjct: 176 RNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN 235
Query: 333 VDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEV 374
L G + + L CL+K P RP+ E+
Sbjct: 236 -----PPTLEGNYS----KPLKEFVEACLNKEPSFRPTAKEL 268
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 125 LGQGAFGPVYKATMPSGG-VAAIKVLASDSHQGE---KEFQTEVSLLGRLHHRNLVNLIG 180
LG+G FG VY A + A+KVL + E + + E+ + L H N++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLI-----YSEERVLNWEERLQIALDISHGIEYLHEGAV 235
Y D+ + L+ EF G L + + E+R + E L AL Y HE V
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL------HYCHERKV 135
Query: 236 PPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTM 295
IHRD+K N+L+ + K+ADFG S R + GT Y+ P I
Sbjct: 136 ---IHRDIKPENLLMGYKGELKIADFGWSVHAP-SLRRRXMCGTLDYLPPEMIEGKTHDE 191
Query: 296 KSDIFSFGVIIFELITAIHP 315
K D++ GV+ +E + + P
Sbjct: 192 KVDLWCAGVLCYEFLVGMPP 211
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 125 LGQGAFGPVYKATMPSGG-VAAIKVLASDSHQGE---KEFQTEVSLLGRLHHRNLVNLIG 180
LG+G FG VY A + A+KVL + E + + E+ + L H N++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLI-----YSEERVLNWEERLQIALDISHGIEYLHEGAV 235
Y D+ + L+ EF G L + + E+R + E L AL Y HE V
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL------HYCHERKV 135
Query: 236 PPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTM 295
IHRD+K N+L+ + K+ADFG S R + GT Y+ P I
Sbjct: 136 ---IHRDIKPENLLMGYKGELKIADFGWSVHAP-SLRRRXMCGTLDYLPPEMIEGKTHDE 191
Query: 296 KSDIFSFGVIIFELITAIHP 315
K D++ GV+ +E + + P
Sbjct: 192 KVDLWCAGVLCYEFLVGMPP 211
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 14/215 (6%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSGG----VAAIKVLASD-SHQGEKE 159
P A I K T+ +LG GAFG VYK +P G AIKVL + S + KE
Sbjct: 6 PNQALLRILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKE 65
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI 219
E ++ + + L+G C+ L+ + M G L + + L ++ L
Sbjct: 66 ILDEAYVMAGVGSPYVSRLLGICL-TSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNW 124
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN---SGL 276
+ I+ G+ YL + + +HRDL + N+L+ K+ DFGL++ D G
Sbjct: 125 CMQIAKGMSYLEDVRL---VHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGG 181
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
K ++ I +FT +SD++S+GV ++EL+T
Sbjct: 182 KVPIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 108/222 (48%), Gaps = 18/222 (8%)
Query: 114 IQKATQNFTN------ILGQGAFGPVYKATMP-SGGVAAIKVLASDS--HQGEKE-FQTE 163
+Q +T F++ +LG+G+FG V +G A+KV++ + +KE E
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 164 VSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDI 223
V LL +L H N+ L + DKG + L+ E + G L + I S +R + + +I +
Sbjct: 77 VQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR-FSEVDAARIIRQV 135
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRA---KVADFGLSKEEVFDGRNSGLKGTY 280
GI Y H+ ++HRDLK N+LL+ + ++ DFGLS + GT
Sbjct: 136 LSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTA 192
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEY 322
YI P + + K D++S GVI++ L++ P EY
Sbjct: 193 YYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGANEY 233
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 12/204 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLAS---DSHQGEKEFQTEVSLLGRLHHRNLVNLIG 180
+G+G F V A + +G AIK++ + +K F+ EV ++ L+H N+V L
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 78
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
+ LI E+ S G + + + + R+ E R + I ++Y H+ + +H
Sbjct: 79 VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCHQKRI---VH 134
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFT-MKSDI 299
RDLK+ N+LLD M K+ADFG S E G+ G+ Y P K+ + D+
Sbjct: 135 RDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDV 194
Query: 300 FSFGVIIFELITAIHPH--QNLME 321
+S GVI++ L++ P QNL E
Sbjct: 195 WSLGVILYTLVSGSLPFDGQNLKE 218
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 125 LGQGAFGPVYKATMPSGG-VAAIKVLASDSHQGE---KEFQTEVSLLGRLHHRNLVNLIG 180
LG+G FG VY A + A+KVL + E + + E+ + L H N++ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLI-----YSEERVLNWEERLQIALDISHGIEYLHEGAV 235
Y D+ + L+ EF G L + + E+R + E L AL Y HE V
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL------HYCHERKV 136
Query: 236 PPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTM 295
IHRD+K N+L+ + K+ADFG S R + GT Y+ P I
Sbjct: 137 ---IHRDIKPENLLMGYKGELKIADFGWSVHAP-SLRRRXMCGTLDYLPPEMIEGKTHDE 192
Query: 296 KSDIFSFGVIIFELITAIHP 315
K D++ GV+ +E + + P
Sbjct: 193 KVDLWCAGVLCYEFLVGMPP 212
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 124/260 (47%), Gaps = 21/260 (8%)
Query: 121 FTNI--LGQGAFGPVYKAT-MPSGGVAAIKVL-ASDSHQGEKEFQTEVSLLGRLHHRNLV 176
FT + +G+G+FG V+K + V AIK++ ++ ++ Q E+++L + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 177 NLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVP 236
G + K +I E++ GS +L+ E L+ + I +I G++YLH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSEKK- 125
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSKE--EVFDGRNSGLKGTYGYIDPAYISTNKFT 294
IHRD+K+AN+LL K+ADFG++ + + RN+ + GT ++ P I + +
Sbjct: 126 --IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYD 182
Query: 295 MKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVRELA 354
K+DI+S G+ EL PH L L + ++ L G + + L
Sbjct: 183 SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-----PPTLEGNYS----KPLK 233
Query: 355 RIGHKCLHKTPRKRPSIGEV 374
CL+K P RP+ E+
Sbjct: 234 EFVEACLNKEPSFRPTAKEL 253
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 126/275 (45%), Gaps = 34/275 (12%)
Query: 125 LGQGAFGPVYKATM-------PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
LGQG+FG VY+ VA V S S + EF E S++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYS--EERVLN-------WEERLQIALDISHGIE 228
L+G +++ E M++G L + + S E N +E +Q+A +I+ G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 229 YLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVF--DGRNSGLKGTYG--YID 284
YL+ +HR+L + N ++ H K+ DFG+++ +++ D G KG ++
Sbjct: 145 YLNAKKF---VHRNLAARNCMVAHDFTVKIGDFGMTR-DIYETDYYRKGGKGLLPVRWMA 200
Query: 285 PAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVG 343
P + FT SD++SFGV+++E+ + A P+Q L L + G + D
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN---- 256
Query: 344 ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
C + V +L R+ C P RP+ E+ L
Sbjct: 257 -CP-ERVTDLMRM---CWQFNPNMRPTFLEIVNLL 286
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 126/275 (45%), Gaps = 34/275 (12%)
Query: 125 LGQGAFGPVYKATM-------PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
LGQG+FG VY+ VA V S S + EF E S++ ++V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYS--EERVLN-------WEERLQIALDISHGIE 228
L+G +++ E M++G L + + S E N +E +Q+A +I+ G+
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 229 YLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVF--DGRNSGLKGTYG--YID 284
YL+ +HR+L + N ++ H K+ DFG+++ +++ D G KG ++
Sbjct: 146 YLNAKKF---VHRNLAARNCMVAHDFTVKIGDFGMTR-DIYETDYYRKGGKGLLPVRWMA 201
Query: 285 PAYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVG 343
P + FT SD++SFGV+++E+ + A P+Q L L + G + D
Sbjct: 202 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN---- 257
Query: 344 ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
C + V +L R+ C P RP+ E+ L
Sbjct: 258 -CP-ERVTDLMRM---CWQFNPNMRPTFLEIVNLL 287
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 106/222 (47%), Gaps = 15/222 (6%)
Query: 100 APSASGIPRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSG-----GVAAIKVLASD 152
PS P A I K T+ +LG GAFG VYK +P G VA +++ +
Sbjct: 32 TPSGEA-PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREAT 90
Query: 153 SHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLN 212
S + KE E ++ + + ++ L+G C+ LI + M G L + + + +
Sbjct: 91 SPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIG 149
Query: 213 WEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVF 269
+ L + I+ G+ YL + + +HRDL + N+L+ K+ DFGL+K E
Sbjct: 150 SQYLLNWCVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 206
Query: 270 DGRNSGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
+ G K ++ I +T +SD++S+GV ++EL+T
Sbjct: 207 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 11/216 (5%)
Query: 123 NILGQGAFGPVYKATMPSGG----VAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNL 178
+LG+G FG V+ M + G + +G + E +L ++H R +V+L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 179 IGYCVDKGKYMLIYEFMSNGSLSNLIYS-EERVLNWEERLQI--ALDISHGIEYLHEGAV 235
K L+ M+ G + IY+ +E ++E I I G+E+LH+ +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 236 PPVIHRDLKSANILLDHFMRAKVADFGLSKE-EVFDGRNSGLKGTYGYIDPAYISTNKFT 294
I+RDLK N+LLD +++D GL+ E + + G GT G++ P + ++
Sbjct: 311 ---IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYD 367
Query: 295 MKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQ 330
D F+ GV ++E+I A P + E V + Q
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ 403
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 12/216 (5%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKAT-MPSGGVAAIKVLAS---DSHQGEKEFQTEVSLLG 168
D+ +G+G F V A + +G A+K++ +S +K F+ EV ++
Sbjct: 3 DLHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMK 61
Query: 169 RLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIE 228
L+H N+V L + L+ E+ S G + + + + + E R + I ++
Sbjct: 62 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-QIVSAVQ 120
Query: 229 YLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYI 288
Y H+ + +HRDLK+ N+LLD M K+ADFG S E F + G+ Y P
Sbjct: 121 YCHQKFI---VHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF 177
Query: 289 STNKFT-MKSDIFSFGVIIFELITAIHPH--QNLME 321
K+ + D++S GVI++ L++ P QNL E
Sbjct: 178 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE 213
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 11/215 (5%)
Query: 124 ILGQGAFGPVYKATMPSGG----VAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLI 179
+LG+G FG V+ M + G + +G + E +L ++H R +V+L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 180 GYCVDKGKYMLIYEFMSNGSLSNLIYS-EERVLNWEERLQI--ALDISHGIEYLHEGAVP 236
K L+ M+ G + IY+ +E ++E I I G+E+LH+ +
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI- 310
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSKE-EVFDGRNSGLKGTYGYIDPAYISTNKFTM 295
I+RDLK N+LLD +++D GL+ E + + G GT G++ P + ++
Sbjct: 311 --IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 296 KSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQ 330
D F+ GV ++E+I A P + E V + Q
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ 403
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 13/198 (6%)
Query: 123 NILGQGAFGPVYKAT-MPSGGVAAIKVLAS--DSHQGEKEFQT---EVSLLGRLHHRNLV 176
+LG G FG V+K +P G I V + G + FQ + +G L H ++V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 177 NLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVP 236
L+G C L+ +++ GSL + + L + L + I+ G+ YL E +
Sbjct: 97 RLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGM- 154
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN---SGLKGTYGYIDPAYISTNKF 293
+HR+L + N+LL + +VADFG++ D + S K ++ I K+
Sbjct: 155 --VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKY 212
Query: 294 TMKSDIFSFGVIIFELIT 311
T +SD++S+GV ++EL+T
Sbjct: 213 THQSDVWSYGVTVWELMT 230
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 11/215 (5%)
Query: 124 ILGQGAFGPVYKATMPSGG----VAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLI 179
+LG+G FG V+ M + G + +G + E +L ++H R +V+L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 180 GYCVDKGKYMLIYEFMSNGSLSNLIYS-EERVLNWEERLQI--ALDISHGIEYLHEGAVP 236
K L+ M+ G + IY+ +E ++E I I G+E+LH+ +
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI- 310
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSKE-EVFDGRNSGLKGTYGYIDPAYISTNKFTM 295
I+RDLK N+LLD +++D GL+ E + + G GT G++ P + ++
Sbjct: 311 --IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 296 KSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQ 330
D F+ GV ++E+I A P + E V + Q
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ 403
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 11/215 (5%)
Query: 124 ILGQGAFGPVYKATMPSGG----VAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLI 179
+LG+G FG V+ M + G + +G + E +L ++H R +V+L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 180 GYCVDKGKYMLIYEFMSNGSLSNLIYS-EERVLNWEERLQI--ALDISHGIEYLHEGAVP 236
K L+ M+ G + IY+ +E ++E I I G+E+LH+ +
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI- 310
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSKE-EVFDGRNSGLKGTYGYIDPAYISTNKFTM 295
I+RDLK N+LLD +++D GL+ E + + G GT G++ P + ++
Sbjct: 311 --IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 296 KSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQ 330
D F+ GV ++E+I A P + E V + Q
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ 403
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 13/198 (6%)
Query: 123 NILGQGAFGPVYKAT-MPSGGVAAIKVLAS--DSHQGEKEFQT---EVSLLGRLHHRNLV 176
+LG G FG V+K +P G I V + G + FQ + +G L H ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 177 NLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVP 236
L+G C L+ +++ GSL + + L + L + I+ G+ YL E +
Sbjct: 79 RLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGM- 136
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN---SGLKGTYGYIDPAYISTNKF 293
+HR+L + N+LL + +VADFG++ D + S K ++ I K+
Sbjct: 137 --VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKY 194
Query: 294 TMKSDIFSFGVIIFELIT 311
T +SD++S+GV ++EL+T
Sbjct: 195 THQSDVWSYGVTVWELMT 212
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 124/260 (47%), Gaps = 21/260 (8%)
Query: 121 FTNI--LGQGAFGPVYKAT-MPSGGVAAIKVL-ASDSHQGEKEFQTEVSLLGRLHHRNLV 176
FT + +G+G+FG V+K + V AIK++ ++ ++ Q E+++L + +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 177 NLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVP 236
G + K +I E++ GS +L+ E L+ + I +I G++YLH
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSEKK- 145
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSKE--EVFDGRNSGLKGTYGYIDPAYISTNKFT 294
IHRD+K+AN+LL K+ADFG++ + + RN+ + GT ++ P I + +
Sbjct: 146 --IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYD 202
Query: 295 MKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVRELA 354
K+DI+S G+ EL PH L L + ++ L G + + L
Sbjct: 203 SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-----PPTLEGNYS----KPLK 253
Query: 355 RIGHKCLHKTPRKRPSIGEV 374
CL+K P RP+ E+
Sbjct: 254 EFVEACLNKEPSFRPTAKEL 273
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 104/235 (44%), Gaps = 43/235 (18%)
Query: 124 ILGQGAFGPVYKA--TMPSGGVAAIKVLASDSHQGEK--EFQTEVSLLGRLHH------- 172
+LGQGAFG V KA + S A K+ H EK +EV LL L+H
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKI----RHTEEKLSTILSEVMLLASLNHQYVVRYY 68
Query: 173 ------RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHG 226
RN V + K + E+ N +L +LI+SE +E ++ I
Sbjct: 69 AAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEA 128
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE-----EVFDGRNSGLKGTYG 281
+ Y+H + IHRDLK NI +D K+ DFGL+K ++ + L G+
Sbjct: 129 LSYIHSQGI---IHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 282 YIDPA-----YISTN------KFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNL 325
+ A Y++T + K D++S G+I FE+ I+P ME VN+
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM---IYPFSTGMERVNI 237
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 97/208 (46%), Gaps = 22/208 (10%)
Query: 125 LGQGAFGPVYKATMPSG-GVAAIKVL----------ASDSHQGEK---EFQTEVSLLGRL 170
LG GA+G V +G AIKV+ + D+ EK E E+SLL L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 171 HHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYL 230
H N++ L DK + L+ EF G L I + + + + I I GI YL
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK-FDECDAANIMKQILSGICYL 162
Query: 231 HEGAVPPVIHRDLKSANILLDH---FMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAY 287
H+ ++HRD+K NILL++ + K+ DFGLS D + GT YI P
Sbjct: 163 HK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEV 219
Query: 288 ISTNKFTMKSDIFSFGVIIFELITAIHP 315
+ K+ K D++S GVI++ L+ P
Sbjct: 220 LKK-KYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 13/201 (6%)
Query: 124 ILGQGAFGPVYKATMPSGG----VAAIKVLAS----DSHQGEKEFQTEVSLLGRLHHRNL 175
+LG+G +G V++ +G + A+KVL + + + E ++L + H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 176 VNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAV 235
V+LI GK LI E++S G L + E + +A +IS + +LH+ +
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA-EISMALGHLHQKGI 142
Query: 236 PPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGR-NSGLKGTYGYIDPAYISTNKFT 294
I+RDLK NI+L+H K+ DFGL KE + DG GT Y+ P + +
Sbjct: 143 ---IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHN 199
Query: 295 MKSDIFSFGVIIFELITAIHP 315
D +S G ++++++T P
Sbjct: 200 RAVDWWSLGALMYDMLTGAPP 220
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 13/201 (6%)
Query: 124 ILGQGAFGPVYKATMPSGG----VAAIKVLAS----DSHQGEKEFQTEVSLLGRLHHRNL 175
+LG+G +G V++ +G + A+KVL + + + E ++L + H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 176 VNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAV 235
V+LI GK LI E++S G L + E + +A +IS + +LH+ +
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA-EISMALGHLHQKGI 142
Query: 236 PPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGR-NSGLKGTYGYIDPAYISTNKFT 294
I+RDLK NI+L+H K+ DFGL KE + DG GT Y+ P + +
Sbjct: 143 ---IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHN 199
Query: 295 MKSDIFSFGVIIFELITAIHP 315
D +S G ++++++T P
Sbjct: 200 RAVDWWSLGALMYDMLTGAPP 220
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 123/260 (47%), Gaps = 21/260 (8%)
Query: 121 FTNI--LGQGAFGPVYKAT-MPSGGVAAIKVL-ASDSHQGEKEFQTEVSLLGRLHHRNLV 176
FT + +G+G+FG V+K + V AIK++ ++ ++ Q E+++L + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 177 NLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVP 236
G + K +I E++ GS +L+ E L+ + I +I G++YLH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSEKK- 125
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG--RNSGLKGTYGYIDPAYISTNKFT 294
IHRD+K+AN+LL K+ADFG++ ++ D + + GT ++ P I + +
Sbjct: 126 --IHRDIKAANVLLSEHGEVKLADFGVAG-QLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 182
Query: 295 MKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVRELA 354
K+DI+S G+ EL PH L L + ++ L G + + L
Sbjct: 183 SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-----PPTLEGNYS----KPLK 233
Query: 355 RIGHKCLHKTPRKRPSIGEV 374
CL+K P RP+ E+
Sbjct: 234 EFVEACLNKEPSFRPTAKEL 253
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 30/221 (13%)
Query: 114 IQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGR--LH 171
+ + + I +G FG V+KA + + VA +K+ Q ++ +Q+E + +
Sbjct: 12 VPRGSLQLLEIKARGRFGCVWKAQLMNDFVA-VKIFPL---QDKQSWQSEREIFSTPGMK 67
Query: 172 HRNLVNLIGYCVDKGKYM-----LIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHG 226
H NL+ I +G + LI F GSL++ Y + ++ W E +A +S G
Sbjct: 68 HENLLQFIA-AEKRGSNLEVELWLITAFHDKGSLTD--YLKGNIITWNELCHVAETMSRG 124
Query: 227 IEYLHE--------GAVPPVIHRDLKSANILLDHFMRAKVADFGLS---KEEVFDGRNSG 275
+ YLHE G P + HRD KS N+LL + A +ADFGL+ + G G
Sbjct: 125 LSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHG 184
Query: 276 LKGTYGYIDPAYIS-----TNKFTMKSDIFSFGVIIFELIT 311
GT Y+ P + ++ D+++ G++++EL++
Sbjct: 185 QVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 120/255 (47%), Gaps = 12/255 (4%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCV 183
LG GAFG V++ +G V K + + + + E+S++ +LHH L+NL
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 184 DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDL 243
DK + +LI EF+S G L + I +E+ ++ E + G++++HE + ++H D+
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDI 175
Query: 244 KSANILLD--HFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFS 301
K NI+ + K+ DFGL+ + D T + P + +D+++
Sbjct: 176 KPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWA 235
Query: 302 FGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVRELARIGHKCL 361
GV+ + L++ + P + L ++ + D D+ + + E ++ + L
Sbjct: 236 IGVLGYVLLSGLSPFAGEDDLETLQNVKR--CDWEFDEDAFSSVS-PEAKDFIK---NLL 289
Query: 362 HKTPRKRPSIGEVTQ 376
K PRKR ++ + +
Sbjct: 290 QKEPRKRLTVHDALE 304
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 100/196 (51%), Gaps = 14/196 (7%)
Query: 125 LGQGAFGPVYKAT--MPSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLVNLIG 180
LG G FG V + M + AIKVL + + + +E E ++ +L + +V LIG
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
C + ML+ E G L + + + ++ +S G++YL E +H
Sbjct: 404 VCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF---VH 459
Query: 241 RDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYISTNKFTM 295
R+L + N+LL + AK++DFGLSK + + R++G K + P I+ KF+
Sbjct: 460 RNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG-KWPLKWYAPECINFRKFSS 518
Query: 296 KSDIFSFGVIIFELIT 311
+SD++S+GV ++E ++
Sbjct: 519 RSDVWSYGVTMWEALS 534
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 139/288 (48%), Gaps = 45/288 (15%)
Query: 112 KDIQKATQNFT--NILGQGAFGPVYKATMP----SGGVAAIKVLASD--SHQGEKEFQTE 163
+D+ Q FT +LG+G FG V +A + S A+K+L +D + +EF E
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLRE 75
Query: 164 VSLLGRLHHRNLVNLIGYCVD---KGKY---MLIYEFMSNGSLSNLIYSEERV------L 211
+ + H ++ L+G + KG+ M+I FM +G L + + R+ L
Sbjct: 76 AACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLAS-RIGENPFNL 134
Query: 212 NWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG 271
+ ++ +DI+ G+EYL IHRDL + N +L M VADFGLS+ +++ G
Sbjct: 135 PLQTLVRFMVDIACGMEYLSSRNF---IHRDLAARNCMLAEDMTVCVADFGLSR-KIYSG 190
Query: 272 ----RNSGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLAS 327
+ K ++ ++ N +T+ SD+++FGV ++E++T + Y + +
Sbjct: 191 DYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT-----RGQTPYAGIEN 245
Query: 328 MSQDGVDEILDKQLVGACNIQE----VRELARIGHKCLHKTPRKRPSI 371
EI + L+G +++ + E+ + ++C P++RPS
Sbjct: 246 A------EIYN-YLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSF 286
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 21/263 (7%)
Query: 125 LGQGAFGPVYKATMPSGGVA-AIKVL----ASDSHQG--EKEFQTEVSLLGRLHHRNLVN 177
LG G F V K S G+ A K + S +G ++ + EVS+L + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
L +K +LI E ++ G L + + +E+ L EE + I +G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSLQIA- 136
Query: 238 VIHRDLKSANI-LLDHFM---RAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKF 293
H DLK NI LLD + R K+ DFGL+ + F + GT ++ P ++
Sbjct: 137 --HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYEPL 194
Query: 294 TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
+++D++S GVI + L++ P + LA++S E D+ + ++
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY-EFEDEYFSNTSAL--AKDF 251
Query: 354 ARIGHKCLHKTPRKRPSIGEVTQ 376
R + L K P+KR +I + Q
Sbjct: 252 IR---RLLVKDPKKRMTIQDSLQ 271
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 121/263 (46%), Gaps = 27/263 (10%)
Query: 121 FTNI--LGQGAFGPVYKAT-MPSGGVAAIKVL-ASDSHQGEKEFQTEVSLLGRLHHRNLV 176
FT + +G+G+FG VYK + V AIK++ ++ ++ Q E+++L + +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 177 NLIGYCVDKGKYMLIYEFMSNGSLSNLIYS---EERVLNWEERLQIALDISHGIEYLHEG 233
G + K +I E++ GS +L+ EE + I +I G++YLH
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIA-----TILREILKGLDYLHSE 135
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG--RNSGLKGTYGYIDPAYISTN 291
IHRD+K+AN+LL K+ADFG++ ++ D + + GT ++ P I +
Sbjct: 136 RK---IHRDIKAANVLLSEQGDVKLADFGVAG-QLTDTQIKRNXFVGTPFWMAPEVIKQS 191
Query: 292 KFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVR 351
+ K+DI+S G+ EL P+ +L L ++ K Q +
Sbjct: 192 AYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF---------LIPKNSPPTLEGQHSK 242
Query: 352 ELARIGHKCLHKTPRKRPSIGEV 374
CL+K PR RP+ E+
Sbjct: 243 PFKEFVEACLNKDPRFRPTAKEL 265
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 17/214 (7%)
Query: 120 NFTNILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEF---QTEVSLLGRLHHRNL 175
F ILG+G+F V A + + AIK+L E + E ++ RL H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 176 VNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE---RLQIALDISHGIEYLHE 232
V L D K + NG L I ++ +++E R A +I +EYLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGCLLKYI---RKIGSFDETCTRFYTA-EIVSALEYLHG 150
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYIS 289
+ IHRDLK NILL+ M ++ DFG +K E R + GT Y+ P ++
Sbjct: 151 KGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 207
Query: 290 TNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYV 323
+ SD+++ G II++L+ + P + EY+
Sbjct: 208 EKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYL 241
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 104/204 (50%), Gaps = 14/204 (6%)
Query: 120 NFTNILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNL 175
NF +LG+G+FG V A + + AIK+L D + + + E +L L
Sbjct: 22 NFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPF 81
Query: 176 VNLIGYCVDK-GKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI--ALDISHGIEYLHE 232
+ + C + + E+++ G +L+Y ++V ++E + A +IS G+ +LH+
Sbjct: 82 LTQLHSCFQTVDRLYFVMEYVNGG---DLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHK 138
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNS-GLKGTYGYIDPAYISTN 291
+ I+RDLK N++LD K+ADFG+ KE + DG + GT YI P I+
Sbjct: 139 RGI---IYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQ 195
Query: 292 KFTMKSDIFSFGVIIFELITAIHP 315
+ D +++GV+++E++ P
Sbjct: 196 PYGKSVDWWAYGVLLYEMLAGQPP 219
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 129/275 (46%), Gaps = 28/275 (10%)
Query: 115 QKATQNFTNI---LGQGAFGPVYKATMPSGGVA-AIKVL------ASDSHQGEKEFQTEV 164
Q+ ++F +I LG G F V K S G+ A K + AS +E + EV
Sbjct: 7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREV 66
Query: 165 SLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDIS 224
S+L ++ H N++ L ++ +LI E +S G L + + +E L+ EE I
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQIL 125
Query: 225 HGIEYLHEGAVPPVIHRDLKSANI-LLDHFM---RAKVADFGLSKEEVFDGRN-SGLKGT 279
G+ YLH + H DLK NI LLD + K+ DFGL+ E+ DG + GT
Sbjct: 126 DGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-HEIEDGVEFKNIFGT 181
Query: 280 YGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDK 339
++ P ++ +++D++S GVI + L++ P + LA+++ D D+
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD--FDE 239
Query: 340 QLVGACNIQEVRELAR-IGHKCLHKTPRKRPSIGE 373
+ + ELA+ K L K RKR +I E
Sbjct: 240 EFFSQTS-----ELAKDFIRKLLVKETRKRLTIQE 269
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 129/275 (46%), Gaps = 28/275 (10%)
Query: 115 QKATQNFTNI---LGQGAFGPVYKATMPSGGVA-AIKVL------ASDSHQGEKEFQTEV 164
Q+ ++F +I LG G F V K S G+ A K + AS +E + EV
Sbjct: 7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREV 66
Query: 165 SLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDIS 224
S+L ++ H N++ L ++ +LI E +S G L + + +E L+ EE I
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQIL 125
Query: 225 HGIEYLHEGAVPPVIHRDLKSANI-LLDHFM---RAKVADFGLSKEEVFDGRN-SGLKGT 279
G+ YLH + H DLK NI LLD + K+ DFGL+ E+ DG + GT
Sbjct: 126 DGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-HEIEDGVEFKNIFGT 181
Query: 280 YGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDK 339
++ P ++ +++D++S GVI + L++ P + LA+++ D D+
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD--FDE 239
Query: 340 QLVGACNIQEVRELAR-IGHKCLHKTPRKRPSIGE 373
+ + ELA+ K L K RKR +I E
Sbjct: 240 EFFSQTS-----ELAKDFIRKLLVKETRKRLTIQE 269
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 139/315 (44%), Gaps = 30/315 (9%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSG-----GVAAIKVLASDSHQGEKE 159
P A I K T+ +LG GAFG VYK +P G VA ++ + S + KE
Sbjct: 14 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 73
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI 219
E ++ + + ++ L+G C+ LI + M G L + + + + + L
Sbjct: 74 ILDEAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW 132
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGL 276
+ I+ G+ YL + + +HRDL + N+L+ K+ DFGL+K E + G
Sbjct: 133 CVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 189
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEI 336
K ++ I +T +SD++S+GV ++EL+T + + ++S+ + G E
Sbjct: 190 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG--ER 247
Query: 337 LDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI---KQRHLAKQDT-- 391
L + + C I ++ I KC RP E+ K+ QR+L Q
Sbjct: 248 LPQPPI--CTI----DVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDER 301
Query: 392 ---MSFADGEFSRAV 403
S D F RA+
Sbjct: 302 MHLPSPTDSNFYRAL 316
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 139/315 (44%), Gaps = 30/315 (9%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSG-----GVAAIKVLASDSHQGEKE 159
P A I K T+ +LG GAFG VYK +P G VA ++ + S + KE
Sbjct: 7 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 66
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI 219
E ++ + + ++ L+G C+ LI + M G L + + + + + L
Sbjct: 67 ILDEAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW 125
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGL 276
+ I+ G+ YL + + +HRDL + N+L+ K+ DFGL+K E + G
Sbjct: 126 CVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEI 336
K ++ I +T +SD++S+GV ++EL+T + + ++S+ + G E
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG--ER 240
Query: 337 LDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI---KQRHLAKQDT-- 391
L + + C I ++ I KC RP E+ K+ QR+L Q
Sbjct: 241 LPQPPI--CTI----DVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDER 294
Query: 392 ---MSFADGEFSRAV 403
S D F RA+
Sbjct: 295 MHLPSPTDSNFYRAL 309
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 120 NFTNILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEF---QTEVSLLGRLHHRNL 175
F ILG+G+F V A + + AIK+L E + E ++ RL H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 176 VNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE---RLQIALDISHGIEYLHE 232
V L D K + NG L I ++ +++E R A +I +EYLH
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLHG 148
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYIS 289
+ IHRDLK NILL+ M ++ DFG +K E R + GT Y+ P ++
Sbjct: 149 KGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLT 205
Query: 290 TNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYV 323
SD+++ G II++L+ + P + EY+
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 239
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 106/222 (47%), Gaps = 15/222 (6%)
Query: 100 APSASGIPRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSG-----GVAAIKVLASD 152
+PS P A I K T+ +LG GAFG VYK +P G VA ++ +
Sbjct: 2 SPSGEA-PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT 60
Query: 153 SHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLN 212
S + KE E ++ + + ++ L+G C+ LI + M G L + + + +
Sbjct: 61 SPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIG 119
Query: 213 WEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVF 269
+ L + I+ G+ YL + + +HRDL + N+L+ K+ DFGL+K E
Sbjct: 120 SQYLLNWCVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 176
Query: 270 DGRNSGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
+ G K ++ I +T +SD++S+GV ++EL+T
Sbjct: 177 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 129/275 (46%), Gaps = 28/275 (10%)
Query: 115 QKATQNFTNI---LGQGAFGPVYKATMPSGGVA-AIKVL------ASDSHQGEKEFQTEV 164
Q+ ++F +I LG G F V K S G+ A K + AS +E + EV
Sbjct: 7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREV 66
Query: 165 SLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDIS 224
S+L ++ H N++ L ++ +LI E +S G L + + +E L+ EE I
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQIL 125
Query: 225 HGIEYLHEGAVPPVIHRDLKSANI-LLDHFM---RAKVADFGLSKEEVFDGRN-SGLKGT 279
G+ YLH + H DLK NI LLD + K+ DFGL+ E+ DG + GT
Sbjct: 126 DGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-HEIEDGVEFKNIFGT 181
Query: 280 YGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDK 339
++ P ++ +++D++S GVI + L++ P + LA+++ D D+
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD--FDE 239
Query: 340 QLVGACNIQEVRELAR-IGHKCLHKTPRKRPSIGE 373
+ + ELA+ K L K RKR +I E
Sbjct: 240 EFFSHTS-----ELAKDFIRKLLVKETRKRLTIQE 269
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 120/261 (45%), Gaps = 26/261 (9%)
Query: 125 LGQGAFGPV---YKATMPSGGVAAIKVLASDSHQG--EKEFQTEVSLLGRLHHRNLVNLI 179
LG G FG V Y A+K+L ++++ + E E +++ +L + +V +I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 180 GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVI 239
G C + +ML+ E G L+ + V + + +++ +S G++YL E +
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESNF---V 133
Query: 240 HRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYISTNKFT 294
HRDL + N+LL AK++DFGLSK E + + G K + P I+ KF+
Sbjct: 134 HRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHG-KWPVKWYAPECINYYKFS 192
Query: 295 MKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
KSD++SFGV+++E + P++ M V +L+K C RE+
Sbjct: 193 SKSDVWSFGVLMWEAFSYGQKPYR---------GMKGSEVTAMLEKGERMGCPAGCPREM 243
Query: 354 ARIGHKCLHKTPRKRPSIGEV 374
+ + C RP V
Sbjct: 244 YDLMNLCWTYDVENRPGFAAV 264
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 120/261 (45%), Gaps = 26/261 (9%)
Query: 125 LGQGAFGPV---YKATMPSGGVAAIKVLASDSHQG--EKEFQTEVSLLGRLHHRNLVNLI 179
LG G FG V Y A+K+L ++++ + E E +++ +L + +V +I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 180 GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVI 239
G C + +ML+ E G L+ + V + + +++ +S G++YL E +
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESNF---V 133
Query: 240 HRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYISTNKFT 294
HRDL + N+LL AK++DFGLSK E + + G K + P I+ KF+
Sbjct: 134 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-KWPVKWYAPECINYYKFS 192
Query: 295 MKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
KSD++SFGV+++E + P++ M V +L+K C RE+
Sbjct: 193 SKSDVWSFGVLMWEAFSYGQKPYR---------GMKGSEVTAMLEKGERMGCPAGCPREM 243
Query: 354 ARIGHKCLHKTPRKRPSIGEV 374
+ + C RP V
Sbjct: 244 YDLMNLCWTYDVENRPGFAAV 264
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 21/263 (7%)
Query: 125 LGQGAFGPVYKATMPSGGVA-AIKVL----ASDSHQG--EKEFQTEVSLLGRLHHRNLVN 177
LG G F V K S G+ A K + S +G ++ + EVS+L + H N++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
L +K +LI E ++ G L + + +E+ L EE + I +G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSLQIA- 136
Query: 238 VIHRDLKSANI-LLDHFM---RAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKF 293
H DLK NI LLD + R K+ DFGL+ + F + GT ++ P ++
Sbjct: 137 --HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
Query: 294 TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
+++D++S GVI + L++ P + LA++S E D+ + ++
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY-EFEDEYFSNTSAL--AKDF 251
Query: 354 ARIGHKCLHKTPRKRPSIGEVTQ 376
R + L K P+KR +I + Q
Sbjct: 252 IR---RLLVKDPKKRMTIQDSLQ 271
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 12/204 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLAS---DSHQGEKEFQTEVSLLGRLHHRNLVNLIG 180
+G+G F V A + +G A+K++ +S +K F+ EV + L+H N+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIVKLFE 80
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
+ L+ E+ S G + + + + R E R + I ++Y H+ + +H
Sbjct: 81 VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCHQKFI---VH 136
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFT-MKSDI 299
RDLK+ N+LLD K+ADFG S E F + G Y P K+ + D+
Sbjct: 137 RDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDV 196
Query: 300 FSFGVIIFELITAIHPH--QNLME 321
+S GVI++ L++ P QNL E
Sbjct: 197 WSLGVILYTLVSGSLPFDGQNLKE 220
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 120 NFTNILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEF---QTEVSLLGRLHHRNL 175
F ILG+G+F V A + + AIK+L E + E ++ RL H
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 176 VNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE---RLQIALDISHGIEYLHE 232
V L D K + NG L I ++ +++E R A +I +EYLH
Sbjct: 96 VKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLHG 151
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYIS 289
+ IHRDLK NILL+ M ++ DFG +K E R + GT Y+ P ++
Sbjct: 152 KGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 208
Query: 290 TNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYV 323
SD+++ G II++L+ + P + EY+
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 242
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSG-----GVAAIKVLASDSHQGEKE 159
P A I K T+ +LG GAFG VYK +P G VA ++ + S + KE
Sbjct: 5 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 64
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI 219
E ++ + + ++ L+G C+ LI + M G L + + + + + L
Sbjct: 65 ILDEAYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW 123
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGL 276
+ I+ G+ YL + + +HRDL + N+L+ K+ DFGL+K E + G
Sbjct: 124 CVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
K ++ I +T +SD++S+GV ++EL+T
Sbjct: 181 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 120 NFTNILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEF---QTEVSLLGRLHHRNL 175
F ILG+G+F V A + + AIK+L E + E ++ RL H
Sbjct: 11 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 70
Query: 176 VNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE---RLQIALDISHGIEYLHE 232
V L D K + NG L I ++ +++E R A +I +EYLH
Sbjct: 71 VKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLHG 126
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYIS 289
+ IHRDLK NILL+ M ++ DFG +K E R + GT Y+ P ++
Sbjct: 127 KGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 183
Query: 290 TNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYV 323
SD+++ G II++L+ + P + EY+
Sbjct: 184 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 217
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 15/220 (6%)
Query: 103 ASG-IPRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSG-----GVAAIKVLASDSH 154
ASG P A I K T+ +LG GAFG VYK +P G VA ++ + S
Sbjct: 5 ASGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP 64
Query: 155 QGEKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWE 214
+ KE E ++ + + ++ L+G C+ LI + M G L + + + + +
Sbjct: 65 KANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQ 123
Query: 215 ERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDG 271
L + I+ G+ YL + + +HRDL + N+L+ K+ DFGL+K E +
Sbjct: 124 YLLNWCVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 180
Query: 272 RNSGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
G K ++ I +T +SD++S+GV ++EL+T
Sbjct: 181 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 120/261 (45%), Gaps = 26/261 (9%)
Query: 125 LGQGAFGPV---YKATMPSGGVAAIKVLASDSHQG--EKEFQTEVSLLGRLHHRNLVNLI 179
LG G FG V Y A+K+L ++++ + E E +++ +L + +V +I
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 180 GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVI 239
G C + +ML+ E G L+ + V + + +++ +S G++YL E +
Sbjct: 75 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESNF---V 129
Query: 240 HRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYISTNKFT 294
HRDL + N+LL AK++DFGLSK E + + G K + P I+ KF+
Sbjct: 130 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-KWPVKWYAPECINYYKFS 188
Query: 295 MKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
KSD++SFGV+++E + P++ M V +L+K C RE+
Sbjct: 189 SKSDVWSFGVLMWEAFSYGQKPYR---------GMKGSEVTAMLEKGERMGCPAGCPREM 239
Query: 354 ARIGHKCLHKTPRKRPSIGEV 374
+ + C RP V
Sbjct: 240 YDLMNLCWTYDVENRPGFAAV 260
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 120/261 (45%), Gaps = 26/261 (9%)
Query: 125 LGQGAFGPV---YKATMPSGGVAAIKVLASDSHQG--EKEFQTEVSLLGRLHHRNLVNLI 179
LG G FG V Y A+K+L ++++ + E E +++ +L + +V +I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 180 GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVI 239
G C + +ML+ E G L+ + V + + +++ +S G++YL E +
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESNF---V 149
Query: 240 HRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYISTNKFT 294
HRDL + N+LL AK++DFGLSK E + + G K + P I+ KF+
Sbjct: 150 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-KWPVKWYAPECINYYKFS 208
Query: 295 MKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
KSD++SFGV+++E + P++ M V +L+K C RE+
Sbjct: 209 SKSDVWSFGVLMWEAFSYGQKPYR---------GMKGSEVTAMLEKGERMGCPAGCPREM 259
Query: 354 ARIGHKCLHKTPRKRPSIGEV 374
+ + C RP V
Sbjct: 260 YDLMNLCWTYDVENRPGFAAV 280
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 120/261 (45%), Gaps = 26/261 (9%)
Query: 125 LGQGAFGPV---YKATMPSGGVAAIKVLASDSHQG--EKEFQTEVSLLGRLHHRNLVNLI 179
LG G FG V Y A+K+L ++++ + E E +++ +L + +V +I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 180 GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVI 239
G C + +ML+ E G L+ + V + + +++ +S G++YL E +
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESNF---V 149
Query: 240 HRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYISTNKFT 294
HRDL + N+LL AK++DFGLSK E + + G K + P I+ KF+
Sbjct: 150 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-KWPVKWYAPECINYYKFS 208
Query: 295 MKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
KSD++SFGV+++E + P++ M V +L+K C RE+
Sbjct: 209 SKSDVWSFGVLMWEAFSYGQKPYR---------GMKGSEVTAMLEKGERMGCPAGCPREM 259
Query: 354 ARIGHKCLHKTPRKRPSIGEV 374
+ + C RP V
Sbjct: 260 YDLMNLCWTYDVENRPGFAAV 280
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 129/275 (46%), Gaps = 28/275 (10%)
Query: 115 QKATQNFTNI---LGQGAFGPVYKATMPSGGVA-AIKVL------ASDSHQGEKEFQTEV 164
Q+ ++F +I LG G F V K S G+ A K + AS +E + EV
Sbjct: 7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREV 66
Query: 165 SLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDIS 224
S+L ++ H N++ L ++ +LI E +S G L + + +E L+ EE I
Sbjct: 67 SILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQIL 125
Query: 225 HGIEYLHEGAVPPVIHRDLKSANI-LLDHFM---RAKVADFGLSKEEVFDGRN-SGLKGT 279
G+ YLH + H DLK NI LLD + K+ DFGL+ E+ DG + GT
Sbjct: 126 DGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-HEIEDGVEFKNIFGT 181
Query: 280 YGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDK 339
++ P ++ +++D++S GVI + L++ P + LA+++ D D+
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD--FDE 239
Query: 340 QLVGACNIQEVRELAR-IGHKCLHKTPRKRPSIGE 373
+ + ELA+ K L K RKR +I E
Sbjct: 240 EFFSQTS-----ELAKDFIRKLLVKETRKRLTIQE 269
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSG-----GVAAIKVLASDSHQGEKE 159
P A I K T+ +LG GAFG VYK +P G VA ++ + S + KE
Sbjct: 4 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 63
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI 219
E ++ + + ++ L+G C+ LI + M G L + + + + + L
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW 122
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGL 276
+ I+ G+ YL + + +HRDL + N+L+ K+ DFGL+K E + G
Sbjct: 123 CVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
K ++ I +T +SD++S+GV ++EL+T
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 104/212 (49%), Gaps = 17/212 (8%)
Query: 120 NFTNILGQGAFGPVYKAT-MPSGGVAAIKVL--ASDSHQGEKEFQTEVSLLGRLHHRNLV 176
N +LG+G+FG V K + A+KV+ AS ++ EV LL +L H N++
Sbjct: 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 177 NLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVP 236
L D + ++ E + G L + I +R + + +I + GI Y+H+ +
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHKHNI- 142
Query: 237 PVIHRDLKSANILLDHFMR---AKVADFGLSKEEVFDGRNSGLK---GTYGYIDPAYIST 290
+HRDLK NILL+ + K+ DFGLS F +N+ +K GT YI P +
Sbjct: 143 --VHRDLKPENILLESKEKDCDIKIIDFGLST--CFQ-QNTKMKDRIGTAYYIAPEVLR- 196
Query: 291 NKFTMKSDIFSFGVIIFELITAIHPHQNLMEY 322
+ K D++S GVI++ L++ P EY
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEY 228
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 120 NFTNILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEF---QTEVSLLGRLHHRNL 175
F ILG+G+F V A + + AIK+L E + E ++ RL H
Sbjct: 12 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 71
Query: 176 VNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE---RLQIALDISHGIEYLHE 232
V L D K + NG L I ++ +++E R A +I +EYLH
Sbjct: 72 VKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLHG 127
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYIS 289
+ IHRDLK NILL+ M ++ DFG +K E R + GT Y+ P ++
Sbjct: 128 KGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 184
Query: 290 TNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYV 323
SD+++ G II++L+ + P + EY+
Sbjct: 185 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 218
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSG-----GVAAIKVLASDSHQGEKE 159
P A I K T+ +LG GAFG VYK +P G VA ++ + S + KE
Sbjct: 6 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 65
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI 219
E ++ + + ++ L+G C+ LI + M G L + + + + + L
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW 124
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGL 276
+ I+ G+ YL + + +HRDL + N+L+ K+ DFGL+K E + G
Sbjct: 125 CVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
K ++ I +T +SD++S+GV ++EL+T
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 120 NFTNILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEF---QTEVSLLGRLHHRNL 175
F ILG+G+F V A + + AIK+L E + E ++ RL H
Sbjct: 13 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 72
Query: 176 VNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE---RLQIALDISHGIEYLHE 232
V L D K + NG L I ++ +++E R A +I +EYLH
Sbjct: 73 VKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLHG 128
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYIS 289
+ IHRDLK NILL+ M ++ DFG +K E R + GT Y+ P ++
Sbjct: 129 KGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 185
Query: 290 TNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYV 323
SD+++ G II++L+ + P + EY+
Sbjct: 186 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 219
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSG-----GVAAIKVLASDSHQGEKE 159
P A I K T+ +LG GAFG VYK +P G VA ++ + S + KE
Sbjct: 4 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 63
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI 219
E ++ + + ++ L+G C+ LI + M G L + + + + + L
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW 122
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGL 276
+ I+ G+ YL + + +HRDL + N+L+ K+ DFGL+K E + G
Sbjct: 123 CVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
K ++ I +T +SD++S+GV ++EL+T
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 129/275 (46%), Gaps = 28/275 (10%)
Query: 115 QKATQNFTNI---LGQGAFGPVYKATMPSGGVA-AIKVL------ASDSHQGEKEFQTEV 164
Q+ ++F +I LG G F V K S G+ A K + AS +E + EV
Sbjct: 7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREV 66
Query: 165 SLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDIS 224
S+L ++ H N++ L ++ +LI E +S G L + + +E L+ EE I
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQIL 125
Query: 225 HGIEYLHEGAVPPVIHRDLKSANI-LLDHFM---RAKVADFGLSKEEVFDGRN-SGLKGT 279
G+ YLH + H DLK NI LLD + K+ DFGL+ E+ DG + GT
Sbjct: 126 DGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-HEIEDGVEFKNIFGT 181
Query: 280 YGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDK 339
++ P ++ +++D++S GVI + L++ P + LA+++ D D+
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD--FDE 239
Query: 340 QLVGACNIQEVRELAR-IGHKCLHKTPRKRPSIGE 373
+ + ELA+ K L K RKR +I E
Sbjct: 240 EFFSHTS-----ELAKDFIRKLLVKETRKRLTIQE 269
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSG-----GVAAIKVLASDSHQGEKE 159
P A I K T+ +LG GAFG VYK +P G VA ++ + S + KE
Sbjct: 7 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 66
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI 219
E ++ + + ++ L+G C+ LI + M G L + + + + + L
Sbjct: 67 ILDEAYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW 125
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGL 276
+ I+ G+ YL + + +HRDL + N+L+ K+ DFGL+K E + G
Sbjct: 126 CVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
K ++ I +T +SD++S+GV ++EL+T
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 120/261 (45%), Gaps = 26/261 (9%)
Query: 125 LGQGAFGPV---YKATMPSGGVAAIKVLASDSHQG--EKEFQTEVSLLGRLHHRNLVNLI 179
LG G FG V Y A+K+L ++++ + E E +++ +L + +V +I
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 180 GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVI 239
G C + +ML+ E G L+ + V + + +++ +S G++YL E +
Sbjct: 93 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESNF---V 147
Query: 240 HRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYISTNKFT 294
HRDL + N+LL AK++DFGLSK E + + G K + P I+ KF+
Sbjct: 148 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-KWPVKWYAPECINYYKFS 206
Query: 295 MKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
KSD++SFGV+++E + P++ M V +L+K C RE+
Sbjct: 207 SKSDVWSFGVLMWEAFSYGQKPYR---------GMKGSEVTAMLEKGERMGCPAGCPREM 257
Query: 354 ARIGHKCLHKTPRKRPSIGEV 374
+ + C RP V
Sbjct: 258 YDLMNLCWTYDVENRPGFAAV 278
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 120/261 (45%), Gaps = 26/261 (9%)
Query: 125 LGQGAFGPV---YKATMPSGGVAAIKVLASDSHQG--EKEFQTEVSLLGRLHHRNLVNLI 179
LG G FG V Y A+K+L ++++ + E E +++ +L + +V +I
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 180 GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVI 239
G C + +ML+ E G L+ + V + + +++ +S G++YL E +
Sbjct: 73 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESNF---V 127
Query: 240 HRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYISTNKFT 294
HRDL + N+LL AK++DFGLSK E + + G K + P I+ KF+
Sbjct: 128 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-KWPVKWYAPECINYYKFS 186
Query: 295 MKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
KSD++SFGV+++E + P++ M V +L+K C RE+
Sbjct: 187 SKSDVWSFGVLMWEAFSYGQKPYR---------GMKGSEVTAMLEKGERMGCPAGCPREM 237
Query: 354 ARIGHKCLHKTPRKRPSIGEV 374
+ + C RP V
Sbjct: 238 YDLMNLCWTYDVENRPGFAAV 258
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 21/263 (7%)
Query: 125 LGQGAFGPVYKATMPSGGVA-AIKVL----ASDSHQG--EKEFQTEVSLLGRLHHRNLVN 177
LG G F V K S G+ A K + S +G ++ + EVS+L + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
L +K +LI E ++ G L + + +E+ L EE + I +G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSLQIA- 136
Query: 238 VIHRDLKSANI-LLDHFM---RAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKF 293
H DLK NI LLD + R K+ DFGL+ + F + GT ++ P ++
Sbjct: 137 --HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
Query: 294 TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
+++D++S GVI + L++ P + LA++S E D+ + ++
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY-EFEDEYFSNTSAL--AKDF 251
Query: 354 ARIGHKCLHKTPRKRPSIGEVTQ 376
R + L K P+KR +I + Q
Sbjct: 252 IR---RLLVKDPKKRMTIQDSLQ 271
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 21/263 (7%)
Query: 125 LGQGAFGPVYKATMPSGGVA-AIKVL----ASDSHQG--EKEFQTEVSLLGRLHHRNLVN 177
LG G F V K S G+ A K + S +G ++ + EVS+L + H N++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
L +K +LI E ++ G L + + +E+ L EE + I +G+ YLH +
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSLQIA- 135
Query: 238 VIHRDLKSANI-LLDHFM---RAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKF 293
H DLK NI LLD + R K+ DFGL+ + F + GT ++ P ++
Sbjct: 136 --HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 193
Query: 294 TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
+++D++S GVI + L++ P + LA++S E D+ + ++
Sbjct: 194 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY-EFEDEYFSNTSAL--AKDF 250
Query: 354 ARIGHKCLHKTPRKRPSIGEVTQ 376
R + L K P+KR +I + Q
Sbjct: 251 IR---RLLVKDPKKRMTIQDSLQ 270
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 21/263 (7%)
Query: 125 LGQGAFGPVYKATMPSGGVA-AIKVL----ASDSHQG--EKEFQTEVSLLGRLHHRNLVN 177
LG G F V K S G+ A K + S +G ++ + EVS+L + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
L +K +LI E ++ G L + + +E+ L EE + I +G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSLQIA- 136
Query: 238 VIHRDLKSANI-LLDHFM---RAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKF 293
H DLK NI LLD + R K+ DFGL+ + F + GT ++ P ++
Sbjct: 137 --HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
Query: 294 TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
+++D++S GVI + L++ P + LA++S E D+ + ++
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY-EFEDEYFSNTSAL--AKDF 251
Query: 354 ARIGHKCLHKTPRKRPSIGEVTQ 376
R + L K P+KR +I + Q
Sbjct: 252 IR---RLLVKDPKKRMTIQDSLQ 271
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 120 NFTNILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEF---QTEVSLLGRLHHRNL 175
F ILG+G+F V A + + AIK+L E + E ++ RL H
Sbjct: 10 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 69
Query: 176 VNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE---RLQIALDISHGIEYLHE 232
V L D K + NG L I ++ +++E R A +I +EYLH
Sbjct: 70 VKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLHG 125
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYIS 289
+ IHRDLK NILL+ M ++ DFG +K E R + GT Y+ P ++
Sbjct: 126 KGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 182
Query: 290 TNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYV 323
SD+++ G II++L+ + P + EY+
Sbjct: 183 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 216
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 104/212 (49%), Gaps = 17/212 (8%)
Query: 120 NFTNILGQGAFGPVYKAT-MPSGGVAAIKVL--ASDSHQGEKEFQTEVSLLGRLHHRNLV 176
N +LG+G+FG V K + A+KV+ AS ++ EV LL +L H N++
Sbjct: 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 177 NLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVP 236
L D + ++ E + G L + I +R + + +I + GI Y+H+ +
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHKHNI- 142
Query: 237 PVIHRDLKSANILLDHFMR---AKVADFGLSKEEVFDGRNSGLK---GTYGYIDPAYIST 290
+HRDLK NILL+ + K+ DFGLS F +N+ +K GT YI P +
Sbjct: 143 --VHRDLKPENILLESKEKDCDIKIIDFGLST--CFQ-QNTKMKDRIGTAYYIAPEVLR- 196
Query: 291 NKFTMKSDIFSFGVIIFELITAIHPHQNLMEY 322
+ K D++S GVI++ L++ P EY
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEY 228
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 21/263 (7%)
Query: 125 LGQGAFGPVYKATMPSGGVA-AIKVL----ASDSHQG--EKEFQTEVSLLGRLHHRNLVN 177
LG G F V K S G+ A K + S +G ++ + EVS+L + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
L +K +LI E ++ G L + + +E+ L EE + I +G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSLQIA- 136
Query: 238 VIHRDLKSANI-LLDHFM---RAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKF 293
H DLK NI LLD + R K+ DFGL+ + F + GT ++ P ++
Sbjct: 137 --HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
Query: 294 TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
+++D++S GVI + L++ P + LA++S E D+ + ++
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY-EFEDEYFSNTSAL--AKDF 251
Query: 354 ARIGHKCLHKTPRKRPSIGEVTQ 376
R + L K P+KR +I + Q
Sbjct: 252 IR---RLLVKDPKKRMTIQDSLQ 271
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSG-----GVAAIKVLASDSHQGEKE 159
P A I K T+ +LG GAFG VYK +P G VA ++ + S + KE
Sbjct: 4 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 63
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI 219
E ++ + + ++ L+G C+ LI + M G L + + + + + L
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW 122
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGL 276
+ I+ G+ YL + + +HRDL + N+L+ K+ DFGL+K E + G
Sbjct: 123 CVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
K ++ I +T +SD++S+GV ++EL+T
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSG-----GVAAIKVLASDSHQGEKE 159
P A I K T+ +LG GAFG VYK +P G VA ++ + S + KE
Sbjct: 5 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 64
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI 219
E ++ + + ++ L+G C+ LI + M G L + + + + + L
Sbjct: 65 ILDEAYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNW 123
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGL 276
+ I+ G+ YL + + +HRDL + N+L+ K+ DFGL+K E + G
Sbjct: 124 CVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 180
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
K ++ I +T +SD++S+GV ++EL+T
Sbjct: 181 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 21/263 (7%)
Query: 125 LGQGAFGPVYKATMPSGGVA-AIKVL----ASDSHQG--EKEFQTEVSLLGRLHHRNLVN 177
LG G F V K S G+ A K + S +G ++ + EVS+L + H N++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
L +K +LI E ++ G L + + +E+ L EE + I +G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSLQIA- 136
Query: 238 VIHRDLKSANI-LLDHFM---RAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKF 293
H DLK NI LLD + R K+ DFGL+ + F + GT ++ P ++
Sbjct: 137 --HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
Query: 294 TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
+++D++S GVI + L++ P + LA++S E D+ + ++
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY-EFEDEYFSNTSAL--AKDF 251
Query: 354 ARIGHKCLHKTPRKRPSIGEVTQ 376
R + L K P+KR +I + Q
Sbjct: 252 IR---RLLVKDPKKRMTIQDSLQ 271
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 21/263 (7%)
Query: 125 LGQGAFGPVYKATMPSGGVA-AIKVL----ASDSHQG--EKEFQTEVSLLGRLHHRNLVN 177
LG G F V K S G+ A K + S +G ++ + EVS+L + H N++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
L +K +LI E ++ G L + + +E+ L EE + I +G+ YLH +
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSLQIA- 135
Query: 238 VIHRDLKSANI-LLDHFM---RAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKF 293
H DLK NI LLD + R K+ DFGL+ + F + GT ++ P ++
Sbjct: 136 --HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 193
Query: 294 TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
+++D++S GVI + L++ P + LA++S E D+ + ++
Sbjct: 194 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY-EFEDEYFSNTSAL--AKDF 250
Query: 354 ARIGHKCLHKTPRKRPSIGEVTQ 376
R + L K P+KR +I + Q
Sbjct: 251 IR---RLLVKDPKKRMTIQDSLQ 270
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 120/261 (45%), Gaps = 26/261 (9%)
Query: 125 LGQGAFGPV---YKATMPSGGVAAIKVLASDSHQG--EKEFQTEVSLLGRLHHRNLVNLI 179
LG G FG V Y A+K+L ++++ + E E +++ +L + +V +I
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 180 GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVI 239
G C + +ML+ E G L+ + V + + +++ +S G++YL E +
Sbjct: 85 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESNF---V 139
Query: 240 HRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYISTNKFT 294
HRDL + N+LL AK++DFGLSK E + + G K + P I+ KF+
Sbjct: 140 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-KWPVKWYAPECINYYKFS 198
Query: 295 MKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
KSD++SFGV+++E + P++ M V +L+K C RE+
Sbjct: 199 SKSDVWSFGVLMWEAFSYGQKPYR---------GMKGSEVTAMLEKGERMGCPAGCPREM 249
Query: 354 ARIGHKCLHKTPRKRPSIGEV 374
+ + C RP V
Sbjct: 250 YDLMNLCWTYDVENRPGFAAV 270
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSG-----GVAAIKVLASDSHQGEKE 159
P A I K T+ +LG GAFG VYK +P G VA ++ + S + KE
Sbjct: 7 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 66
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI 219
E ++ + + ++ L+G C+ LI + M G L + + + + + L
Sbjct: 67 ILDEAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW 125
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGL 276
+ I+ G+ YL + + +HRDL + N+L+ K+ DFGL+K E + G
Sbjct: 126 CVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
K ++ I +T +SD++S+GV ++EL+T
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSG-----GVAAIKVLASDSHQGEKE 159
P A I K T+ +LG GAFG VYK +P G VA ++ + S + KE
Sbjct: 11 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 70
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI 219
E ++ + + ++ L+G C+ LI + M G L + + + + + L
Sbjct: 71 ILDEAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW 129
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGL 276
+ I+ G+ YL + + +HRDL + N+L+ K+ DFGL+K E + G
Sbjct: 130 CVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
K ++ I +T +SD++S+GV ++EL+T
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 21/263 (7%)
Query: 125 LGQGAFGPVYKATMPSGGVA-AIKVL----ASDSHQG--EKEFQTEVSLLGRLHHRNLVN 177
LG G F V K S G+ A K + S +G ++ + EVS+L + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
L +K +LI E ++ G L + + +E+ L EE + I +G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSLQIA- 136
Query: 238 VIHRDLKSANI-LLDHFM---RAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKF 293
H DLK NI LLD + R K+ DFGL+ + F + GT ++ P ++
Sbjct: 137 --HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
Query: 294 TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
+++D++S GVI + L++ P + LA++S E D+ + ++
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY-EFEDEYFSNTSAL--AKDF 251
Query: 354 ARIGHKCLHKTPRKRPSIGEVTQ 376
R + L K P+KR +I + Q
Sbjct: 252 IR---RLLVKDPKKRMTIQDSLQ 271
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 120 NFTNILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEF---QTEVSLLGRLHHRNL 175
F ILG+G+F V A + + AIK+L E + E ++ RL H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 176 VNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE---RLQIALDISHGIEYLHE 232
V L D K + NG L I ++ +++E R A +I +EYLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLHG 150
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYIS 289
+ IHRDLK NILL+ M ++ DFG +K E R + GT Y+ P ++
Sbjct: 151 KGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 290 TNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYV 323
SD+++ G II++L+ + P + EY+
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 241
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 120 NFTNILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEF---QTEVSLLGRLHHRNL 175
F ILG+G+F V A + + AIK+L E + E ++ RL H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 176 VNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE---RLQIALDISHGIEYLHE 232
V L D K + NG L I ++ +++E R A +I +EYLH
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLHG 148
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYIS 289
+ IHRDLK NILL+ M ++ DFG +K E R + GT Y+ P ++
Sbjct: 149 KGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 290 TNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYV 323
SD+++ G II++L+ + P + EY+
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 239
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSG-----GVAAIKVLASDSHQGEKE 159
P A I K T+ +LG GAFG VYK +P G VA ++ + S + KE
Sbjct: 7 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 66
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI 219
E ++ + + ++ L+G C+ LI + M G L + + + + + L
Sbjct: 67 ILDEAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW 125
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGL 276
+ I+ G+ YL + + +HRDL + N+L+ K+ DFGL+K E + G
Sbjct: 126 CVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 182
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
K ++ I +T +SD++S+GV ++EL+T
Sbjct: 183 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 120 NFTNILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEF---QTEVSLLGRLHHRNL 175
F ILG+G+F V A + + AIK+L E + E ++ RL H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 176 VNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE---RLQIALDISHGIEYLHE 232
V L D K + NG L I ++ +++E R A +I +EYLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLHG 150
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYIS 289
+ IHRDLK NILL+ M ++ DFG +K E R + GT Y+ P ++
Sbjct: 151 KGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 290 TNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYV 323
SD+++ G II++L+ + P + EY+
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 241
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 129/275 (46%), Gaps = 28/275 (10%)
Query: 115 QKATQNFTNI---LGQGAFGPVYKATMPSGGVA-AIKVL------ASDSHQGEKEFQTEV 164
Q+ ++F +I LG G F V K S G+ A K + AS +E + EV
Sbjct: 7 QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREV 66
Query: 165 SLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDIS 224
S+L ++ H N++ L ++ +LI E +S G L + + +E L+ EE I
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-LSEEEATSFIKQIL 125
Query: 225 HGIEYLHEGAVPPVIHRDLKSANI-LLDHFM---RAKVADFGLSKEEVFDGRN-SGLKGT 279
G+ YLH + H DLK NI LLD + K+ DFGL+ E+ DG + GT
Sbjct: 126 DGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-HEIEDGVEFKNIFGT 181
Query: 280 YGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDK 339
++ P ++ +++D++S GVI + L++ P + LA+++ D D+
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD--FDE 239
Query: 340 QLVGACNIQEVRELAR-IGHKCLHKTPRKRPSIGE 373
+ + ELA+ K L K RKR +I E
Sbjct: 240 EFFSHTS-----ELAKDFIRKLLVKETRKRLTIQE 269
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 120 NFTNILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEF---QTEVSLLGRLHHRNL 175
F ILG+G+F V A + + AIK+L E + E ++ RL H
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 176 VNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE---RLQIALDISHGIEYLHE 232
V L D K + NG L I ++ +++E R A +I +EYLH
Sbjct: 96 VKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLHG 151
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYIS 289
+ IHRDLK NILL+ M ++ DFG +K E R + GT Y+ P ++
Sbjct: 152 KGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 208
Query: 290 TNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYV 323
SD+++ G II++L+ + P + EY+
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 242
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 21/263 (7%)
Query: 125 LGQGAFGPVYKATMPSGGVA-AIKVL----ASDSHQG--EKEFQTEVSLLGRLHHRNLVN 177
LG G F V K S G+ A K + S +G ++ + EVS+L + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
L +K +LI E ++ G L + + +E+ L EE + I +G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSLQIA- 136
Query: 238 VIHRDLKSANI-LLDHFM---RAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKF 293
H DLK NI LLD + R K+ DFGL+ + F + GT ++ P ++
Sbjct: 137 --HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
Query: 294 TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
+++D++S GVI + L++ P + LA++S E D+ + ++
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY-EFEDEYFSNTSAL--AKDF 251
Query: 354 ARIGHKCLHKTPRKRPSIGEVTQ 376
R + L K P+KR +I + Q
Sbjct: 252 IR---RLLVKDPKKRMTIQDSLQ 271
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSG-----GVAAIKVLASDSHQGEKE 159
P A I K T+ +LG GAFG VYK +P G VA ++ + S + KE
Sbjct: 6 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 65
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI 219
E ++ + + ++ L+G C+ LI + M G L + + + + + L
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW 124
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGL 276
+ I+ G+ YL + + +HRDL + N+L+ K+ DFGL+K E + G
Sbjct: 125 CVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 181
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
K ++ I +T +SD++S+GV ++EL+T
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 120 NFTNILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEF---QTEVSLLGRLHHRNL 175
F ILG+G+F V A + + AIK+L E + E ++ RL H
Sbjct: 40 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 99
Query: 176 VNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE---RLQIALDISHGIEYLHE 232
V L D K + NG L I ++ +++E R A +I +EYLH
Sbjct: 100 VKLYFCFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLHG 155
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYIS 289
+ IHRDLK NILL+ M ++ DFG +K E R + GT Y+ P ++
Sbjct: 156 KGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 212
Query: 290 TNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYV 323
SD+++ G II++L+ + P + EY+
Sbjct: 213 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 246
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 120 NFTNILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEF---QTEVSLLGRLHHRNL 175
F ILG+G+F V A + + AIK+L E + E ++ RL H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 176 VNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE---RLQIALDISHGIEYLHE 232
V L D K + NG L I ++ +++E R A +I +EYLH
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLHG 148
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYIS 289
+ IHRDLK NILL+ M ++ DFG +K E R + GT Y+ P ++
Sbjct: 149 KGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 290 TNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYV 323
SD+++ G II++L+ + P + EY+
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 239
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 120 NFTNILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEF---QTEVSLLGRLHHRNL 175
F ILG+G+F V A + + AIK+L E + E ++ RL H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 176 VNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE---RLQIALDISHGIEYLHE 232
V L D K + NG L I ++ +++E R A +I +EYLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLHG 150
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYIS 289
+ IHRDLK NILL+ M ++ DFG +K E R + GT Y+ P ++
Sbjct: 151 KGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 290 TNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYV 323
SD+++ G II++L+ + P + EY+
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 241
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSG-----GVAAIKVLASDSHQGEKE 159
P A I K T+ +LG GAFG VYK +P G VA ++ + S + KE
Sbjct: 4 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 63
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI 219
E ++ + + ++ L+G C+ LI + M G L + + + + + L
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNW 122
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGL 276
+ I+ G+ YL + + +HRDL + N+L+ K+ DFGL+K E + G
Sbjct: 123 CVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
K ++ I +T +SD++S+GV ++EL+T
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 120/261 (45%), Gaps = 26/261 (9%)
Query: 125 LGQGAFGPV---YKATMPSGGVAAIKVLASDSHQG--EKEFQTEVSLLGRLHHRNLVNLI 179
LG G FG V Y A+K+L ++++ + E E +++ +L + +V +I
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 180 GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVI 239
G C + +ML+ E G L+ + V + + +++ +S G++YL E +
Sbjct: 437 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESNF---V 491
Query: 240 HRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYISTNKFT 294
HRDL + N+LL AK++DFGLSK E + + G K + P I+ KF+
Sbjct: 492 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-KWPVKWYAPECINYYKFS 550
Query: 295 MKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
KSD++SFGV+++E + P++ M V +L+K C RE+
Sbjct: 551 SKSDVWSFGVLMWEAFSYGQKPYR---------GMKGSEVTAMLEKGERMGCPAGCPREM 601
Query: 354 ARIGHKCLHKTPRKRPSIGEV 374
+ + C RP V
Sbjct: 602 YDLMNLCWTYDVENRPGFAAV 622
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 21/263 (7%)
Query: 125 LGQGAFGPVYKATMPSGGVA-AIKVL----ASDSHQG--EKEFQTEVSLLGRLHHRNLVN 177
LG G F V K S G+ A K + S +G ++ + EVS+L + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
L +K +LI E ++ G L + + +E+ L EE + I +G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSLQIA- 136
Query: 238 VIHRDLKSANI-LLDHFM---RAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKF 293
H DLK NI LLD + R K+ DFGL+ + F + GT ++ P ++
Sbjct: 137 --HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
Query: 294 TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
+++D++S GVI + L++ P + LA++S E D+ + ++
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY-EFEDEYFSNTSAL--AKDF 251
Query: 354 ARIGHKCLHKTPRKRPSIGEVTQ 376
R + L K P+KR +I + Q
Sbjct: 252 IR---RLLVKDPKKRMTIQDSLQ 271
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 120/261 (45%), Gaps = 26/261 (9%)
Query: 125 LGQGAFGPV---YKATMPSGGVAAIKVLASDSHQG--EKEFQTEVSLLGRLHHRNLVNLI 179
LG G FG V Y A+K+L ++++ + E E +++ +L + +V +I
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 180 GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVI 239
G C + +ML+ E G L+ + V + + +++ +S G++YL E +
Sbjct: 438 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESNF---V 492
Query: 240 HRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPAYISTNKFT 294
HRDL + N+LL AK++DFGLSK E + + G K + P I+ KF+
Sbjct: 493 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-KWPVKWYAPECINYYKFS 551
Query: 295 MKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
KSD++SFGV+++E + P++ M V +L+K C RE+
Sbjct: 552 SKSDVWSFGVLMWEAFSYGQKPYR---------GMKGSEVTAMLEKGERMGCPAGCPREM 602
Query: 354 ARIGHKCLHKTPRKRPSIGEV 374
+ + C RP V
Sbjct: 603 YDLMNLCWTYDVENRPGFAAV 623
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 120 NFTNILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEF---QTEVSLLGRLHHRNL 175
F ILG+G+F V A + + AIK+L E + E ++ RL H
Sbjct: 38 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 97
Query: 176 VNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE---RLQIALDISHGIEYLHE 232
V L D K + NG L I ++ +++E R A +I +EYLH
Sbjct: 98 VKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLHG 153
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYIS 289
+ IHRDLK NILL+ M ++ DFG +K E R + GT Y+ P ++
Sbjct: 154 KGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 210
Query: 290 TNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYV 323
SD+++ G II++L+ + P + EY+
Sbjct: 211 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 244
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 21/263 (7%)
Query: 125 LGQGAFGPVYKATMPSGGVA-AIKVL----ASDSHQG--EKEFQTEVSLLGRLHHRNLVN 177
LG G F V K S G+ A K + S +G ++ + EVS+L + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
L +K +LI E ++ G L + + +E+ L EE + I +G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSLQIA- 136
Query: 238 VIHRDLKSANI-LLDHFM---RAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKF 293
H DLK NI LLD + R K+ DFGL+ + F + GT ++ P ++
Sbjct: 137 --HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
Query: 294 TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
+++D++S GVI + L++ P + LA++S E D+ + ++
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY-EFEDEYFSNTSAL--AKDF 251
Query: 354 ARIGHKCLHKTPRKRPSIGEVTQ 376
R + L K P+KR +I + Q
Sbjct: 252 IR---RLLVKDPKKRMTIQDSLQ 271
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 120 NFTNILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEF---QTEVSLLGRLHHRNL 175
F ILG+G+F V A + + AIK+L E + E ++ RL H
Sbjct: 17 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 76
Query: 176 VNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE---RLQIALDISHGIEYLHE 232
V L D K + NG L I ++ +++E R A +I +EYLH
Sbjct: 77 VKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLHG 132
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYIS 289
+ IHRDLK NILL+ M ++ DFG +K E R + GT Y+ P ++
Sbjct: 133 KGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 189
Query: 290 TNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYV 323
SD+++ G II++L+ + P + EY+
Sbjct: 190 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 223
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 102/195 (52%), Gaps = 9/195 (4%)
Query: 125 LGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLI-GYC 182
+G+G+ G V A SG A+K++ Q + EV ++ H N+V + Y
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRD 242
V + ++L+ EF+ G+L++++ S+ R LN E+ + + + YLH V IHRD
Sbjct: 113 VGEELWVLM-EFLQGGALTDIV-SQVR-LNEEQIATVCEAVLQALAYLHAQGV---IHRD 166
Query: 243 LKSANILLDHFMRAKVADFGLSKEEVFD-GRNSGLKGTYGYIDPAYISTNKFTMKSDIFS 301
+KS +ILL R K++DFG + D + L GT ++ P IS + + + DI+S
Sbjct: 167 IKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWS 226
Query: 302 FGVIIFELITAIHPH 316
G+++ E++ P+
Sbjct: 227 LGIMVIEMVDGEPPY 241
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 21/263 (7%)
Query: 125 LGQGAFGPVYKATMPSGGVA-AIKVL----ASDSHQG--EKEFQTEVSLLGRLHHRNLVN 177
LG G F V K S G+ A K + S +G ++ + EVS+L + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
L +K +LI E ++ G L + + +E+ L EE + I +G+ YLH +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSLQIA- 136
Query: 238 VIHRDLKSANI-LLDHFM---RAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKF 293
H DLK NI LLD + R K+ DFGL+ + F + GT ++ P ++
Sbjct: 137 --HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
Query: 294 TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
+++D++S GVI + L++ P + LA++S E D+ + ++
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY-EFEDEYFSNTSAL--AKDF 251
Query: 354 ARIGHKCLHKTPRKRPSIGEVTQ 376
R + L K P+KR +I + Q
Sbjct: 252 IR---RLLVKDPKKRMTIQDSLQ 271
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 120 NFTNILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEF---QTEVSLLGRLHHRNL 175
F ILG+G+F V A + + AIK+L E + E ++ RL H
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 176 VNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE---RLQIALDISHGIEYLHE 232
V L D K + NG L I ++ +++E R A +I +EYLH
Sbjct: 92 VKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLHG 147
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYIS 289
+ IHRDLK NILL+ M ++ DFG +K E R + GT Y+ P ++
Sbjct: 148 KGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 204
Query: 290 TNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYV 323
SD+++ G II++L+ + P + EY+
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 238
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 13/198 (6%)
Query: 123 NILGQGAFGPVYKAT-MPSG-----GVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLV 176
+LG GAFG VYK +P G VA ++ + S + KE E ++ + + ++
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 177 NLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVP 236
L+G C+ LI + M G L + + + + + L + I+ G+ YL + +
Sbjct: 78 RLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRRL- 135
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYISTNKF 293
+HRDL + N+L+ K+ DFGL+K E + G K ++ I +
Sbjct: 136 --VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 193
Query: 294 TMKSDIFSFGVIIFELIT 311
T +SD++S+GV ++EL+T
Sbjct: 194 THQSDVWSYGVTVWELMT 211
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 99/222 (44%), Gaps = 17/222 (7%)
Query: 125 LGQGAFGPVY----KATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIG 180
LG GA+G V K T + IK + + EV++L +L H N++ L
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
+ DK Y L+ E G L + I ++ + + I + G YLH+ + +H
Sbjct: 89 FFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-IMKQVLSGTTYLHKHNI---VH 144
Query: 241 RDLKSANILLDHFMR---AKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKS 297
RDLK N+LL+ R K+ DFGLS G+ GT YI P + K+ K
Sbjct: 145 RDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPE-VLRKKYDEKC 203
Query: 298 DIFSFGVIIFELITAIHP-----HQNLMEYVNLASMSQDGVD 334
D++S GVI++ L+ P Q +++ V S D D
Sbjct: 204 DVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPD 245
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 104/212 (49%), Gaps = 17/212 (8%)
Query: 120 NFTNILGQGAFGPVYKAT-MPSGGVAAIKVL--ASDSHQGEKEFQTEVSLLGRLHHRNLV 176
N +LG+G+FG V K + A+KV+ AS ++ EV LL +L H N++
Sbjct: 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 177 NLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVP 236
L D + ++ E + G L + I +R + + +I + GI Y+H+ +
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMHKHNI- 142
Query: 237 PVIHRDLKSANILLDHFMR---AKVADFGLSKEEVFDGRNSGLK---GTYGYIDPAYIST 290
+HRDLK NILL+ + K+ DFGLS F +N+ +K GT YI P +
Sbjct: 143 --VHRDLKPENILLESKEKDCDIKIIDFGLST--CFQ-QNTKMKDRIGTAYYIAPEVLR- 196
Query: 291 NKFTMKSDIFSFGVIIFELITAIHPHQNLMEY 322
+ K D++S GVI++ L++ P EY
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEY 228
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 13/198 (6%)
Query: 123 NILGQGAFGPVYKAT-MPSG-----GVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLV 176
+LG GAFG VYK +P G VA ++ + S + KE E ++ + + ++
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 177 NLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVP 236
L+G C+ LI + M G L + + + + + L + I+ G+ YL + +
Sbjct: 75 RLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL- 132
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYISTNKF 293
+HRDL + N+L+ K+ DFGL+K E + G K ++ I +
Sbjct: 133 --VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 190
Query: 294 TMKSDIFSFGVIIFELIT 311
T +SD++S+GV ++EL+T
Sbjct: 191 THQSDVWSYGVTVWELMT 208
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 14/215 (6%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSG-----GVAAIKVLASDSHQGEKE 159
P A I K T+ +LG GAFG VYK +P G VA ++ + S + KE
Sbjct: 29 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 88
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI 219
E ++ + + ++ L+G C+ LI + M G L + + + + + L
Sbjct: 89 ILDEAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW 147
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGL 276
+ I+ G+ YL + + +HRDL + N+L+ K+ DFGL+K E + G
Sbjct: 148 CVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 204
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
K ++ I +T +SD++S+GV ++EL+T
Sbjct: 205 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 12/204 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLAS---DSHQGEKEFQTEVSLLGRLHHRNLVNLIG 180
+G+G F V A + +G A+K++ + +K F+ EV ++ L+H N+V L
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 81
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
+ L+ E+ S G + + + + R+ E R + I ++Y H+ + +H
Sbjct: 82 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKYI---VH 137
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFT-MKSDI 299
RDLK+ N+LLD M K+ADFG S E + G+ Y P K+ + D+
Sbjct: 138 RDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDV 197
Query: 300 FSFGVIIFELITAIHPH--QNLME 321
+S GVI++ L++ P QNL E
Sbjct: 198 WSLGVILYTLVSGSLPFDGQNLKE 221
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 17/214 (7%)
Query: 120 NFTNILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEF---QTEVSLLGRLHHRNL 175
F ILG+G+F V A + + AIK+L E + E ++ RL H
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 176 VNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE---RLQIALDISHGIEYLHE 232
V L D K + NG L I ++ +++E R A +I +EYLH
Sbjct: 92 VKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLHG 147
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYIS 289
+ IHRDLK NILL+ M ++ DFG +K E R + GT Y+ P ++
Sbjct: 148 KGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 204
Query: 290 TNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYV 323
SD+++ G II++L+ + P + EY+
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 238
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 10/209 (4%)
Query: 112 KDIQKATQNFTNILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQG-EKEFQTEVSLLGR 169
+DI+K + F LG GAF V A +G + A+K + + +G E + E+++L +
Sbjct: 18 EDIKKIFE-FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRK 76
Query: 170 LHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEY 229
+ H N+V L L+ + +S G L + I E+ ++ + + + Y
Sbjct: 77 IKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIV-EKGFYTEKDASTLIRQVLDAVYY 135
Query: 230 LHEGAVPPVIHRDLKSANILL---DHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPA 286
LH + +HRDLK N+L D + ++DFGLSK E S GT GY+ P
Sbjct: 136 LHRMGI---VHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPE 192
Query: 287 YISTNKFTMKSDIFSFGVIIFELITAIHP 315
++ ++ D +S GVI + L+ P
Sbjct: 193 VLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 123/263 (46%), Gaps = 21/263 (7%)
Query: 125 LGQGAFGPVYKATMPSGGVA-AIKVL----ASDSHQG--EKEFQTEVSLLGRLHHRNLVN 177
LG G F V K S G+ A K + S +G ++ + EVS+L + H N++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
L +K +LI E ++ G L + + +E+ L EE + I +G+ YLH +
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLHSLQIA- 136
Query: 238 VIHRDLKSANI-LLDHFM---RAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKF 293
H DLK NI LLD + R K+ DFGL+ + F + GT ++ P ++
Sbjct: 137 --HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 194
Query: 294 TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
+++D++S GVI + L++ P + LA++S E D+ + ++
Sbjct: 195 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY-EFEDEYFSNTSAL--AKDF 251
Query: 354 ARIGHKCLHKTPRKRPSIGEVTQ 376
R + L K P+KR +I + Q
Sbjct: 252 IR---RLLVKDPKKRMTIQDSLQ 271
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 10/205 (4%)
Query: 124 ILGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYC 182
+LG+G +G VY S V AIK + + + E++L L H+N+V +G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQ--IALDISHGIEYLHEGAVPPVIH 240
+ G + E + GSLS L+ S+ L E+ I G++YLH+ ++H
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVH 145
Query: 241 RDLKSANILLDHFMRA-KVADFGLSKEEV-FDGRNSGLKGTYGYIDPAYISTNK--FTMK 296
RD+K N+L++ + K++DFG SK + GT Y+ P I +
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKA 205
Query: 297 SDIFSFGVIIFELITAIHPHQNLME 321
+DI+S G I E+ T P L E
Sbjct: 206 ADIWSLGCTIIEMATGKPPFYELGE 230
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 91/198 (45%), Gaps = 12/198 (6%)
Query: 125 LGQGAFGPVY----KATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIG 180
LG GA+G V K T + IK + + EV++L +L H N++ L
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
+ DK Y L+ E G L + I ++ + + I + G YLH+ ++H
Sbjct: 72 FFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-IMKQVLSGTTYLHK---HNIVH 127
Query: 241 RDLKSANILLDHFMR---AKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKS 297
RDLK N+LL+ R K+ DFGLS G+ GT YI P + K+ K
Sbjct: 128 RDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLR-KKYDEKC 186
Query: 298 DIFSFGVIIFELITAIHP 315
D++S GVI++ L+ P
Sbjct: 187 DVWSCGVILYILLCGYPP 204
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 10/196 (5%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKE-FQTEVSLLGRLHHRNLVNLIGYCV 183
LG GAFG V++ T + G H+ +KE + E+ + L H LVNL
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 184 DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDL 243
D + ++IYEFMS G L + E ++ +E ++ + G+ ++HE +H DL
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDL 281
Query: 244 KSANILL--DHFMRAKVADFGLSKEEVFDGRNS--GLKGTYGYIDPAYISTNKFTMKSDI 299
K NI+ K+ DFGL+ D + S GT + P +D+
Sbjct: 282 KPENIMFTTKRSNELKLIDFGLTAH--LDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDM 339
Query: 300 FSFGVIIFELITAIHP 315
+S GV+ + L++ + P
Sbjct: 340 WSVGVLSYILLSGLSP 355
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 10/196 (5%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKE-FQTEVSLLGRLHHRNLVNLIGYCV 183
LG GAFG V++ T + G H+ +KE + E+ + L H LVNL
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 184 DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDL 243
D + ++IYEFMS G L + E ++ +E ++ + G+ ++HE +H DL
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDL 175
Query: 244 KSANILL--DHFMRAKVADFGLSKEEVFDGRNS--GLKGTYGYIDPAYISTNKFTMKSDI 299
K NI+ K+ DFGL+ D + S GT + P +D+
Sbjct: 176 KPENIMFTTKRSNELKLIDFGLTAH--LDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDM 233
Query: 300 FSFGVIIFELITAIHP 315
+S GV+ + L++ + P
Sbjct: 234 WSVGVLSYILLSGLSP 249
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 133/284 (46%), Gaps = 28/284 (9%)
Query: 100 APSASGIPRYAYKDIQKATQNFTNI--LGQGAFGPVYKAT-MPSGGVAAIKVL-ASDSHQ 155
+P A +P +I + FT + +G+G+FG V+K + V AIK++ ++
Sbjct: 5 SPVAVQVPGMQ-NNIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAED 63
Query: 156 GEKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE 215
++ Q E+++L + + G + K +I E++ GS +L+ R ++E
Sbjct: 64 EIEDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLL----RAGPFDE 119
Query: 216 RLQIAL---DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE--EVFD 270
QIA +I G++YLH IHRD+K+AN+LL K+ADFG++ + +
Sbjct: 120 -FQIATMLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 175
Query: 271 GRNSGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQ 330
RN+ GT ++ P I + + K+DI+S G+ EL P+ ++ L + +
Sbjct: 176 KRNT-FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPK 234
Query: 331 DGVDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEV 374
+ LVG + CL+K P RP+ E+
Sbjct: 235 NN-----PPTLVGDF----TKSFKEFIDACLNKDPSFRPTAKEL 269
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 138/315 (43%), Gaps = 30/315 (9%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSG-----GVAAIKVLASDSHQGEKE 159
P A I K T+ +LG GAFG VYK +P G VA ++ + S + KE
Sbjct: 6 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 65
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI 219
E ++ + + ++ L+G C+ LI + M G L + + + + + L
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW 124
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGL 276
+ I+ G+ YL + + +HRDL + N+L+ K+ DFG +K E + G
Sbjct: 125 CVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEI 336
K ++ I +T +SD++S+GV ++EL+T + + ++S+ + G E
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG--ER 239
Query: 337 LDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI---KQRHLAKQDT-- 391
L + + C I ++ I KC RP E+ K+ QR+L Q
Sbjct: 240 LPQPPI--CTI----DVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDER 293
Query: 392 ---MSFADGEFSRAV 403
S D F RA+
Sbjct: 294 MHLPSPTDSNFYRAL 308
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 17/214 (7%)
Query: 120 NFTNILGQGAFGP-VYKATMPSGGVAAIKVLASDSHQGEKEF---QTEVSLLGRLHHRNL 175
F ILG+G+F V + + AIK+L E + E ++ RL H
Sbjct: 33 KFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 176 VNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE---RLQIALDISHGIEYLHE 232
V L D K + NG L I ++ +++E R A +I +EYLH
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLHG 148
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYIS 289
+ IHRDLK NILL+ M ++ DFG +K E R + GT Y+ P ++
Sbjct: 149 KGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 290 TNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYV 323
SD+++ G II++L+ + P + EY+
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 239
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 10/213 (4%)
Query: 112 KDIQKATQNFTNILGQGAFGPV----YKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLL 167
+ + K T +LG+G FG V +AT ++ +GE E +L
Sbjct: 179 QPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL 238
Query: 168 GRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEER-LQIALDISHG 226
+++ R +V+L K L+ M+ G L IY + E R + A +I G
Sbjct: 239 EKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCG 298
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN-SGLKGTYGYIDP 285
+E LH + ++RDLK NILLD +++D GL+ V +G+ G GT GY+ P
Sbjct: 299 LEDLHRERI---VYRDLKPENILLDDHGHIRISDLGLAVH-VPEGQTIKGRVGTVGYMAP 354
Query: 286 AYISTNKFTMKSDIFSFGVIIFELITAIHPHQN 318
+ ++T D ++ G +++E+I P Q
Sbjct: 355 EVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 138/315 (43%), Gaps = 30/315 (9%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSG-----GVAAIKVLASDSHQGEKE 159
P A I K T+ +LG GAFG VYK +P G VA ++ + S + KE
Sbjct: 6 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 65
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI 219
E ++ + + ++ L+G C+ LI + M G L + + + + + L
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW 124
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGL 276
+ I+ G+ YL + + +HRDL + N+L+ K+ DFG +K E + G
Sbjct: 125 CVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEI 336
K ++ I +T +SD++S+GV ++EL+T + + ++S+ + G E
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG--ER 239
Query: 337 LDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI---KQRHLAKQDT-- 391
L + + C I ++ I KC RP E+ K+ QR+L Q
Sbjct: 240 LPQPPI--CTI----DVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDER 293
Query: 392 ---MSFADGEFSRAV 403
S D F RA+
Sbjct: 294 MHLPSPTDSNFYRAL 308
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 10/205 (4%)
Query: 124 ILGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYC 182
+LG+G +G VY S V AIK + + + E++L L H+N+V +G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQ--IALDISHGIEYLHEGAVPPVIH 240
+ G + E + GSLS L+ S+ L E+ I G++YLH+ ++H
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVH 131
Query: 241 RDLKSANILLDHFMRA-KVADFGLSKEEV-FDGRNSGLKGTYGYIDPAYISTNK--FTMK 296
RD+K N+L++ + K++DFG SK + GT Y+ P I +
Sbjct: 132 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKA 191
Query: 297 SDIFSFGVIIFELITAIHPHQNLME 321
+DI+S G I E+ T P L E
Sbjct: 192 ADIWSLGCTIIEMATGKPPFYELGE 216
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 10/213 (4%)
Query: 112 KDIQKATQNFTNILGQGAFGPV----YKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLL 167
+ + K T +LG+G FG V +AT ++ +GE E +L
Sbjct: 179 QPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL 238
Query: 168 GRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEER-LQIALDISHG 226
+++ R +V+L K L+ M+ G L IY + E R + A +I G
Sbjct: 239 EKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCG 298
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN-SGLKGTYGYIDP 285
+E LH + ++RDLK NILLD +++D GL+ V +G+ G GT GY+ P
Sbjct: 299 LEDLHRERI---VYRDLKPENILLDDHGHIRISDLGLAVH-VPEGQTIKGRVGTVGYMAP 354
Query: 286 AYISTNKFTMKSDIFSFGVIIFELITAIHPHQN 318
+ ++T D ++ G +++E+I P Q
Sbjct: 355 EVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 101/232 (43%), Gaps = 43/232 (18%)
Query: 125 LGQGAFGPVYKAT--MPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYC 182
LG+G FG V++A + A ++ + ++ EV L +L H +V
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 183 VDKGKYMLIYEFMSNGSLSNLIY------SEERVLNW-------EER-----LQIALDIS 224
++K E + S +Y +E + +W EER L I L I+
Sbjct: 73 LEKN----TTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIA 128
Query: 225 HGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGL--------SKEEVFD-----G 271
+E+LH + +HRDLK +NI KV DFGL ++ V
Sbjct: 129 EAVEFLHSKGL---MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 272 RNSGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYV 323
R++G GT Y+ P I N ++ K DIFS G+I+FEL ++P ME V
Sbjct: 186 RHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL---LYPFSTQMERV 234
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 90/204 (44%), Gaps = 16/204 (7%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASD-SHQGEKEFQTEVSLLGRLHHRNLVNL---- 178
LG G FG V + +G AIK + S + + + E+ ++ +L+H N+V+
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 179 --IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL--DISHGIEYLHEGA 234
+ +L E+ G L + E +E L DIS + YLHE
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR 142
Query: 235 VPPVIHRDLKSANILLD---HFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTN 291
+ IHRDLK NI+L + K+ D G +KE + GT Y+ P +
Sbjct: 143 I---IHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQK 199
Query: 292 KFTMKSDIFSFGVIIFELITAIHP 315
K+T+ D +SFG + FE IT P
Sbjct: 200 KYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 14/215 (6%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSG-----GVAAIKVLASDSHQGEKE 159
P A I K T+ +L GAFG VYK +P G VA ++ + S + KE
Sbjct: 11 PNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 70
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI 219
E ++ + + ++ L+G C+ LI + M G L + + + + + L
Sbjct: 71 ILDEAYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW 129
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGL 276
+ I+ G+ YL + + +HRDL + N+L+ K+ DFGL+K E + G
Sbjct: 130 CVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
K ++ I +T +SD++S+GV ++EL+T
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 14/215 (6%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSG-----GVAAIKVLASDSHQGEKE 159
P A I K T+ +LG GAFG VYK +P G VA ++ + S + KE
Sbjct: 8 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 67
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI 219
E ++ + + ++ L+G C+ LI + M G L + + + + + L
Sbjct: 68 ILDEAYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW 126
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGL 276
+ I+ G+ YL + + +HRDL + N+L+ K+ DFG +K E + G
Sbjct: 127 CVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 183
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
K ++ I +T +SD++S+GV ++EL+T
Sbjct: 184 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 90/204 (44%), Gaps = 16/204 (7%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASD-SHQGEKEFQTEVSLLGRLHHRNLVNL---- 178
LG G FG V + +G AIK + S + + + E+ ++ +L+H N+V+
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 179 --IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL--DISHGIEYLHEGA 234
+ +L E+ G L + E +E L DIS + YLHE
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR 141
Query: 235 VPPVIHRDLKSANILLD---HFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTN 291
+ IHRDLK NI+L + K+ D G +KE + GT Y+ P +
Sbjct: 142 I---IHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQK 198
Query: 292 KFTMKSDIFSFGVIIFELITAIHP 315
K+T+ D +SFG + FE IT P
Sbjct: 199 KYTVTVDYWSFGTLAFECITGFRP 222
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 124 ILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQTEVSLLGR------LHHRNLV 176
+LG+G+FG V+ A + AIK L D + + E +++ + H L
Sbjct: 24 MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDD--VECTMVEKRVLSLAWEHPFLT 81
Query: 177 NLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVP 236
++ K + E+++ G L I S + + A +I G+++LH +
Sbjct: 82 HMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEIILGLQFLHSKGI- 139
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSKEEVF-DGRNSGLKGTYGYIDPAYISTNKFTM 295
++RDLK NILLD K+ADFG+ KE + D + + GT YI P + K+
Sbjct: 140 --VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNH 197
Query: 296 KSDIFSFGVIIFELITAIHP 315
D +SFGV+++E++ P
Sbjct: 198 SVDWWSFGVLLYEMLIGQSP 217
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 120 NFTNILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEF---QTEVSLLGRLHHRNL 175
F ILG+G+F V A + + AIK+L E + E ++ RL H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 176 VNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE---RLQIALDISHGIEYLHE 232
V L D K + NG L I ++ +++E R A +I +EYLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLHG 150
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYIS 289
+ IHRDLK NILL+ M ++ DFG +K E R + GT Y+ P ++
Sbjct: 151 KGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 290 TNKFTMKSDIFSFGVIIFELITAIHPHQ 317
SD+++ G II++L+ + P +
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 14/215 (6%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSG-----GVAAIKVLASDSHQGEKE 159
P A I K T+ +LG GAFG VYK +P G VA ++ + S + KE
Sbjct: 6 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 65
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI 219
E ++ + + ++ L+G C+ LI + M G L + + + + + L
Sbjct: 66 ILDEAYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW 124
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGL 276
+ I+ G+ YL + + +HRDL + N+L+ K+ DFG +K E + G
Sbjct: 125 CVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 181
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
K ++ I +T +SD++S+GV ++EL+T
Sbjct: 182 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 14/215 (6%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSG-----GVAAIKVLASDSHQGEKE 159
P A I K T+ +L GAFG VYK +P G VA ++ + S + KE
Sbjct: 4 PNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 63
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI 219
E ++ + + ++ L+G C+ LI + M G L + + + + + L
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW 122
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGL 276
+ I+ G+ YL + + +HRDL + N+L+ K+ DFGL+K E + G
Sbjct: 123 CVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
K ++ I +T +SD++S+GV ++EL+T
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 120 NFTNILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEF---QTEVSLLGRLHHRNL 175
F ILG+G+F V A + + AIK+L E + E ++ RL H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 176 VNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE---RLQIALDISHGIEYLHE 232
V L D K + NG L I ++ +++E R A +I +EYLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYI---RKIGSFDETCTRFYTA-EIVSALEYLHG 150
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYIS 289
+ IHRDLK NILL+ M ++ DFG +K E R + GT Y+ P ++
Sbjct: 151 KGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 290 TNKFTMKSDIFSFGVIIFELITAIHPHQ 317
SD+++ G II++L+ + P +
Sbjct: 208 EKSAXKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 130/263 (49%), Gaps = 34/263 (12%)
Query: 98 TSAP---SASGIPRY---AYKDIQKATQ-NFTNILGQGAFGPVYKATMP-SGGVAAIKVL 149
T AP +A+ I ++ +D K T NF +LG+G+FG V + + + A+K+L
Sbjct: 315 TKAPEEKTANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKIL 374
Query: 150 ASDSHQGEKEFQT---EVSLLGRLHHRNLVNLIGYCVDK-GKYMLIYEFMSNGSLSNLIY 205
D + + + E +L + + C + + E+++ G +L+Y
Sbjct: 375 KKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGG---DLMY 431
Query: 206 SEERVLNWEERLQI--ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGL 263
++V ++E + A +I+ G+ +L + I+RDLK N++LD K+ADFG+
Sbjct: 432 HIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGI---IYRDLKLDNVMLDSEGHIKIADFGM 488
Query: 264 SKEEVFDGRNS-GLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHP------- 315
KE ++DG + GT YI P I+ + D ++FGV+++E++ P
Sbjct: 489 CKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED 548
Query: 316 --HQNLMEYVNLA---SMSQDGV 333
Q++ME+ N+A SMS++ V
Sbjct: 549 ELFQSIMEH-NVAYPKSMSKEAV 570
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 14/215 (6%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSG-----GVAAIKVLASDSHQGEKE 159
P A I K T+ +L GAFG VYK +P G VA ++ + S + KE
Sbjct: 11 PNQALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 70
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI 219
E ++ + + ++ L+G C+ LI + M G L + + + + + L
Sbjct: 71 ILDEAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW 129
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGL 276
+ I+ G+ YL + + +HRDL + N+L+ K+ DFGL+K E + G
Sbjct: 130 CVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 186
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
K ++ I +T +SD++S+GV ++EL+T
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 14/215 (6%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSG-----GVAAIKVLASDSHQGEKE 159
P A I K T+ +LG GAFG VYK +P G VA ++ + S + KE
Sbjct: 4 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 63
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI 219
E ++ + + ++ L+G C+ LI + M G L + + + + + L
Sbjct: 64 ILDEAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW 122
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGL 276
+ I+ G+ YL + + +HRDL + N+L+ K+ DFG +K E + G
Sbjct: 123 CVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 179
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
K ++ I +T +SD++S+GV ++EL+T
Sbjct: 180 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 14/200 (7%)
Query: 124 ILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQTEVSLLGR------LHHRNLV 176
+LG+G+FG V+ A + AIK L D + + E +++ + H L
Sbjct: 25 MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDD--VECTMVEKRVLSLAWEHPFLT 82
Query: 177 NLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVP 236
++ K + E+++ G L I S + + A +I G+++LH +
Sbjct: 83 HMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEIILGLQFLHSKGI- 140
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSKEEVF-DGRNSGLKGTYGYIDPAYISTNKFTM 295
++RDLK NILLD K+ADFG+ KE + D + + GT YI P + K+
Sbjct: 141 --VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNH 198
Query: 296 KSDIFSFGVIIFELITAIHP 315
D +SFGV+++E++ P
Sbjct: 199 SVDWWSFGVLLYEMLIGQSP 218
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 15/204 (7%)
Query: 125 LGQGAFGPVYKATMPSGG-VAAIKVLASDSH-QGEKE-FQTEVSLLGRLHHRNLVNLIGY 181
+G G++G K S G + K L S + EK+ +EV+LL L H N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 182 CVDKGKYML--IYEFMSNGSLSNLIYS---EERVLNWEERLQIALDISHGIEYLHEGAVP 236
+D+ L + E+ G L+++I E + L+ E L++ ++ ++ H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 237 --PVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK---GTYGYIDPAYISTN 291
V+HRDLK AN+ LD K+ DFGL++ + + S K GT Y+ P ++
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLAR--ILNHDTSFAKTFVGTPYYMSPEQMNRM 191
Query: 292 KFTMKSDIFSFGVIIFELITAIHP 315
+ KSDI+S G +++EL + P
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPP 215
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 14/215 (6%)
Query: 107 PRYAYKDIQKATQ-NFTNILGQGAFGPVYKAT-MPSG-----GVAAIKVLASDSHQGEKE 159
P A I K T+ +LG GAFG VYK +P G VA ++ + S + KE
Sbjct: 11 PNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKE 70
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI 219
E ++ + + ++ L+G C+ LI + M G L + + + + + L
Sbjct: 71 ILDEAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW 129
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGL 276
+ I+ G+ YL + + +HRDL + N+L+ K+ DFG +K E + G
Sbjct: 130 CVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG 186
Query: 277 KGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELIT 311
K ++ I +T +SD++S+GV ++EL+T
Sbjct: 187 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 15/204 (7%)
Query: 125 LGQGAFGPVYKATMPSGG-VAAIKVLASDSH-QGEKE-FQTEVSLLGRLHHRNLVNLIGY 181
+G G++G K S G + K L S + EK+ +EV+LL L H N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 182 CVDKGKYML--IYEFMSNGSLSNLIYS---EERVLNWEERLQIALDISHGIEYLHEGAVP 236
+D+ L + E+ G L+++I E + L+ E L++ ++ ++ H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 237 --PVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK---GTYGYIDPAYISTN 291
V+HRDLK AN+ LD K+ DFGL++ + + S K GT Y+ P ++
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLAR--ILNHDTSFAKAFVGTPYYMSPEQMNRM 191
Query: 292 KFTMKSDIFSFGVIIFELITAIHP 315
+ KSDI+S G +++EL + P
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPP 215
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 124/287 (43%), Gaps = 23/287 (8%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATM-----PSGGVAAIKVLASDSHQGEKEFQTEVSLL 167
+IQ+ +G+G FG V++ P+ VA S ++F E +
Sbjct: 9 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 68
Query: 168 GRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGI 227
+ H ++V LIG + + +I E + G L + + + L+ + A +S +
Sbjct: 69 RQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 127
Query: 228 EYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK--EEVFDGRNSGLKGTYGYIDP 285
YL +HRD+ + N+L+ K+ DFGLS+ E+ + S K ++ P
Sbjct: 128 AYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 184
Query: 286 AYISTNKFTMKSDIFSFGVIIFE-LITAIHPHQNLMEYVNLASMSQDGVDEILD-KQLVG 343
I+ +FT SD++ FGV ++E L+ + P Q + + D + I + ++L
Sbjct: 185 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV--------KNNDVIGRIENGERLPM 236
Query: 344 ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQD 390
N L + KC P +RP E+ L I + A+Q+
Sbjct: 237 PPNCPPT--LYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKAQQE 281
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 124/287 (43%), Gaps = 23/287 (8%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATM-----PSGGVAAIKVLASDSHQGEKEFQTEVSLL 167
+IQ+ +G+G FG V++ P+ VA S ++F E +
Sbjct: 3 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 62
Query: 168 GRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGI 227
+ H ++V LIG + + +I E + G L + + + L+ + A +S +
Sbjct: 63 RQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 121
Query: 228 EYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK--EEVFDGRNSGLKGTYGYIDP 285
YL +HRD+ + N+L+ K+ DFGLS+ E+ + S K ++ P
Sbjct: 122 AYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 178
Query: 286 AYISTNKFTMKSDIFSFGVIIFE-LITAIHPHQNLMEYVNLASMSQDGVDEILD-KQLVG 343
I+ +FT SD++ FGV ++E L+ + P Q + + D + I + ++L
Sbjct: 179 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV--------KNNDVIGRIENGERLPM 230
Query: 344 ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQD 390
N L + KC P +RP E+ L I + A+Q+
Sbjct: 231 PPNCPPT--LYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKAQQE 275
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 124/287 (43%), Gaps = 23/287 (8%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATM-----PSGGVAAIKVLASDSHQGEKEFQTEVSLL 167
+IQ+ +G+G FG V++ P+ VA S ++F E +
Sbjct: 8 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 67
Query: 168 GRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGI 227
+ H ++V LIG + + +I E + G L + + + L+ + A +S +
Sbjct: 68 RQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 126
Query: 228 EYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK--EEVFDGRNSGLKGTYGYIDP 285
YL +HRD+ + N+L+ K+ DFGLS+ E+ + S K ++ P
Sbjct: 127 AYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 183
Query: 286 AYISTNKFTMKSDIFSFGVIIFE-LITAIHPHQNLMEYVNLASMSQDGVDEILD-KQLVG 343
I+ +FT SD++ FGV ++E L+ + P Q + + D + I + ++L
Sbjct: 184 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV--------KNNDVIGRIENGERLPM 235
Query: 344 ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQD 390
N L + KC P +RP E+ L I + A+Q+
Sbjct: 236 PPNCPPT--LYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKAQQE 280
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 13/216 (6%)
Query: 103 ASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQT 162
+SG ++ + + Q + G+G +G VYKA G + A+K + D+ + E T
Sbjct: 8 SSGRENLYFQGLMEKYQKLEKV-GEGTYGVVYKAKDSQGRIVALKRIRLDA-EDEGIPST 65
Query: 163 ---EVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI 219
E+SLL LHH N+V+LI + L++EFM + E + + +++I
Sbjct: 66 AIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDL--KKVLDENKTGLQDSQIKI 123
Query: 220 AL-DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK- 277
L + G+ + H+ + +HRDLK N+L++ K+ADFGL++ R+ +
Sbjct: 124 YLYQLLRGVAHCHQHRI---LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEV 180
Query: 278 GTYGYIDP-AYISTNKFTMKSDIFSFGVIIFELITA 312
T Y P + + K++ DI+S G I E+IT
Sbjct: 181 VTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG 216
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 13/216 (6%)
Query: 103 ASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQT 162
+SG ++ + + Q + G+G +G VYKA G + A+K + D+ + E T
Sbjct: 8 SSGRENLYFQGLMEKYQKLEKV-GEGTYGVVYKAKDSQGRIVALKRIRLDA-EDEGIPST 65
Query: 163 ---EVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI 219
E+SLL LHH N+V+LI + L++EFM + E + + +++I
Sbjct: 66 AIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDL--KKVLDENKTGLQDSQIKI 123
Query: 220 AL-DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK- 277
L + G+ + H+ + +HRDLK N+L++ K+ADFGL++ R+ +
Sbjct: 124 YLYQLLRGVAHCHQHRI---LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEV 180
Query: 278 GTYGYIDP-AYISTNKFTMKSDIFSFGVIIFELITA 312
T Y P + + K++ DI+S G I E+IT
Sbjct: 181 VTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG 216
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 122/282 (43%), Gaps = 36/282 (12%)
Query: 123 NILGQGAFGPVYKATMP-SGGVAAIKVLASD---SHQGEKEFQTEVSLLGRLHHRNLVNL 178
+ LG G FG V +G A+K+L S + + E+ L H +++ L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 179 IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPV 238
+ ++ E++S G L + I RV E R ++ I ++Y H V
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHRHMV--- 132
Query: 239 IHRDLKSANILLDHFMRAKVADFGLSKEEVFDG---RNSGLKGTYGYIDPAYISTNKFT- 294
+HRDLK N+LLD M AK+ADFGLS + DG R+S G+ Y P IS +
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSN-MMSDGEFLRDSC--GSPNYAAPEVISGRLYAG 189
Query: 295 MKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEV--RE 352
+ DI+S GVI++ L+ P + + V + K G I E R
Sbjct: 190 PEVDIWSCGVILYALLCGTLPFDD------------EHVPTLFKKIRGGVFYIPEYLNRS 237
Query: 353 LARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTMSF 394
+A + L P KR +I + I++ KQD S+
Sbjct: 238 VATLLMHMLQVDPLKRATIKD-------IREHEWFKQDLPSY 272
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 17/205 (8%)
Query: 125 LGQGAFGPVYKATMPSGG-VAAIKVLASDSH-QGEKE-FQTEVSLLGRLHHRNLVNLIGY 181
+G G++G K S G + K L S + EK+ +EV+LL L H N+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 182 CVDKGKYML--IYEFMSNGSLSNLIYS---EERVLNWEERLQIALDISHGIEYLHEGAVP 236
+D+ L + E+ G L+++I E + L+ E L++ ++ ++ H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 237 --PVIHRDLKSANILLDHFMRAKVADFGLSK----EEVFDGRNSGLKGTYGYIDPAYIST 290
V+HRDLK AN+ LD K+ DFGL++ +E F GT Y+ P ++
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDF---AKEFVGTPYYMSPEQMNR 190
Query: 291 NKFTMKSDIFSFGVIIFELITAIHP 315
+ KSDI+S G +++EL + P
Sbjct: 191 MSYNEKSDIWSLGCLLYELCALMPP 215
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 19/202 (9%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASD--SHQGEKEFQTEVSLLGRLHHRNLVNLIGY 181
LG+GAF V + +P+G A K++ + S + ++ + E + L H N+V L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 182 CVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA----VPP 237
++G + L+++ ++ G L I + E D SH I+ + E +
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSE--------ADASHCIQQILESVNHCHLNG 123
Query: 238 VIHRDLKSANILLDHFMRA---KVADFGLSKEEVFDGRNS-GLKGTYGYIDPAYISTNKF 293
++HRDLK N+LL + K+ADFGL+ E D + G GT GY+ P + + +
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 294 TMKSDIFSFGVIIFELITAIHP 315
D+++ GVI++ L+ P
Sbjct: 184 GKPVDMWACGVILYILLVGYPP 205
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 121/243 (49%), Gaps = 28/243 (11%)
Query: 112 KDIQKATQ-NFTNILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQ---TEVSL 166
+D K T NF +LG+G+FG V + + + A+K+L D + + + E +
Sbjct: 14 RDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRV 73
Query: 167 LGRLHHRNLVNLIGYCVDK-GKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI--ALDI 223
L + + C + + E+++ G +L+Y ++V ++E + A +I
Sbjct: 74 LALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGG---DLMYHIQQVGRFKEPHAVFYAAEI 130
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNS-GLKGTYGY 282
+ G+ +L + I+RDLK N++LD K+ADFG+ KE ++DG + GT Y
Sbjct: 131 AIGLFFLQSKGI---IYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDY 187
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELITAIHP---------HQNLMEYVNLA---SMSQ 330
I P I+ + D ++FGV+++E++ P Q++ME+ N+A SMS+
Sbjct: 188 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH-NVAYPKSMSK 246
Query: 331 DGV 333
+ V
Sbjct: 247 EAV 249
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 98/202 (48%), Gaps = 19/202 (9%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASD--SHQGEKEFQTEVSLLGRLHHRNLVNLIGY 181
LG+GAF V + +P+G A K++ + S + ++ + E + L H N+V L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 182 CVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA----VPP 237
++G + L+++ ++ G L I + E D SH I+ + E +
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSE--------ADASHCIQQILESVNHCHLNG 123
Query: 238 VIHRDLKSANILLDHFMRA---KVADFGLSKEEVFDGRNS-GLKGTYGYIDPAYISTNKF 293
++HRDLK N+LL + K+ADFGL+ E D + G GT GY+ P + + +
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 294 TMKSDIFSFGVIIFELITAIHP 315
D+++ GVI++ L+ P
Sbjct: 184 GKPVDMWACGVILYILLVGYPP 205
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 95/199 (47%), Gaps = 15/199 (7%)
Query: 125 LGQGAFGPVYKATMPSGGVA-AIKVL--ASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGY 181
LG GA+G V V AIK++ S S + EV++L L H N++ L +
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 182 CVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHR 241
DK Y L+ E G L + I + N + I + G+ YLH+ ++HR
Sbjct: 105 FEDKRNYYLVMECYKGGELFDEIIHRMK-FNEVDAAVIIKQVLSGVTYLHK---HNIVHR 160
Query: 242 DLKSANILLDHFMR---AKVADFGLSKEEVFDGRNSGLK--GTYGYIDPAYISTNKFTMK 296
DLK N+LL+ + K+ DFGLS VF+ + + GT YI P + K+ K
Sbjct: 161 DLKPENLLLESKEKDALIKIVDFGLSA--VFENQKKMKERLGTAYYIAPEVLR-KKYDEK 217
Query: 297 SDIFSFGVIIFELITAIHP 315
D++S GVI+F L+ P
Sbjct: 218 CDVWSIGVILFILLAGYPP 236
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 120 NFTNILGQGAFGPVY----KATMPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHH 172
++ +LG+G FG V KAT G A+K+L + + E TE +L H
Sbjct: 11 DYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
L L + + E+ + G L + S ERV E +I +EYLH
Sbjct: 68 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIVSALEYLHS 126
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN-SGLKGTYGYIDPAYISTN 291
V ++RD+K N++LD K+ DFGL KE + DG GT Y+ P + N
Sbjct: 127 RDV---VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 183
Query: 292 KFTMKSDIFSFGVIIFELITAIHPHQN 318
+ D + GV+++E++ P N
Sbjct: 184 DYGRAVDWWGLGVVMYEMMCGRLPFYN 210
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 120 NFTNILGQGAFGPVY----KATMPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHH 172
++ +LG+G FG V KAT G A+K+L + + E TE +L H
Sbjct: 8 DYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
L L + + E+ + G L + S ERV E +I +EYLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIVSALEYLHS 123
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN-SGLKGTYGYIDPAYISTN 291
V ++RD+K N++LD K+ DFGL KE + DG GT Y+ P + N
Sbjct: 124 RDV---VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 180
Query: 292 KFTMKSDIFSFGVIIFELITAIHPHQN 318
+ D + GV+++E++ P N
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPFYN 207
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 120 NFTNILGQGAFGPVY----KATMPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHH 172
++ +LG+G FG V KAT G A+K+L + + E TE +L H
Sbjct: 8 DYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
L L + + E+ + G L + S ERV E +I +EYLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIVSALEYLHS 123
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN-SGLKGTYGYIDPAYISTN 291
V ++RD+K N++LD K+ DFGL KE + DG GT Y+ P + N
Sbjct: 124 RDV---VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 180
Query: 292 KFTMKSDIFSFGVIIFELITAIHPHQN 318
+ D + GV+++E++ P N
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPFYN 207
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 120 NFTNILGQGAFGPVY----KATMPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHH 172
++ +LG+G FG V KAT G A+K+L + + E TE +L H
Sbjct: 8 DYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
L L + + E+ + G L + S ERV E +I +EYLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIVSALEYLHS 123
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN-SGLKGTYGYIDPAYISTN 291
V ++RD+K N++LD K+ DFGL KE + DG GT Y+ P + N
Sbjct: 124 RDV---VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 292 KFTMKSDIFSFGVIIFELITAIHPHQN 318
+ D + GV+++E++ P N
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPFYN 207
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 121/282 (42%), Gaps = 36/282 (12%)
Query: 123 NILGQGAFGPVYKAT-MPSGGVAAIKVLASD---SHQGEKEFQTEVSLLGRLHHRNLVNL 178
+ LG G FG V +G A+K+L S + + E+ L H +++ L
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 179 IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPV 238
+ ++ E++S G L + I RV E R ++ I ++Y H V
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHRHMV--- 132
Query: 239 IHRDLKSANILLDHFMRAKVADFGLSKEEVFDG---RNSGLKGTYGYIDPAYISTNKFT- 294
+HRDLK N+LLD M AK+ADFGLS + DG R S G+ Y P IS +
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLS-NMMSDGEFLRTSC--GSPNYAAPEVISGRLYAG 189
Query: 295 MKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEV--RE 352
+ DI+S GVI++ L+ P + + V + K G I E R
Sbjct: 190 PEVDIWSCGVILYALLCGTLPFDD------------EHVPTLFKKIRGGVFYIPEYLNRS 237
Query: 353 LARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTMSF 394
+A + L P KR +I + I++ KQD S+
Sbjct: 238 VATLLMHMLQVDPLKRATIKD-------IREHEWFKQDLPSY 272
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 10/197 (5%)
Query: 125 LGQGAFGPVYKA--TMPSGGVA--AIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIG 180
LG G VY A T+ + VA AI + + + K F+ EV +L H+N+V++I
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
+ Y L+ E++ +LS I S L+ + + I GI++ H+ + +H
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYIESHGP-LSVDTAINFTNQILDGIKHAHDMRI---VH 134
Query: 241 RDLKSANILLDHFMRAKVADFGLSK--EEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSD 298
RD+K NIL+D K+ DFG++K E + + + GT Y P +D
Sbjct: 135 RDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTD 194
Query: 299 IFSFGVIIFELITAIHP 315
I+S G++++E++ P
Sbjct: 195 IYSIGIVLYEMLVGEPP 211
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 120 NFTNILGQGAFGPVY----KATMPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHH 172
++ +LG+G FG V KAT G A+K+L + + E TE +L H
Sbjct: 8 DYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
L L + + E+ + G L + S ERV E +I +EYLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIVSALEYLHS 123
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN-SGLKGTYGYIDPAYISTN 291
V ++RD+K N++LD K+ DFGL KE + DG GT Y+ P + N
Sbjct: 124 RDV---VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 292 KFTMKSDIFSFGVIIFELITAIHPHQN 318
+ D + GV+++E++ P N
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPFYN 207
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 120 NFTNILGQGAFGPVY----KATMPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHH 172
++ +LG+G FG V KAT G A+K+L + + E TE +L H
Sbjct: 13 DYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
L L + + E+ + G L + S ERV E +I +EYLH
Sbjct: 70 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIVSALEYLHS 128
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN-SGLKGTYGYIDPAYISTN 291
V ++RD+K N++LD K+ DFGL KE + DG GT Y+ P + N
Sbjct: 129 RDV---VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 185
Query: 292 KFTMKSDIFSFGVIIFELITAIHPHQN 318
+ D + GV+++E++ P N
Sbjct: 186 DYGRAVDWWGLGVVMYEMMCGRLPFYN 212
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 120 NFTNILGQGAFGPVY----KATMPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHH 172
++ +LG+G FG V KAT G A+K+L + + E TE +L H
Sbjct: 8 DYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
L L + + E+ + G L + S ERV E +I +EYLH
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGAEIVSALEYLHS 123
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN-SGLKGTYGYIDPAYISTN 291
V ++RD+K N++LD K+ DFGL KE + DG GT Y+ P + N
Sbjct: 124 RDV---VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 292 KFTMKSDIFSFGVIIFELITAIHPHQN 318
+ D + GV+++E++ P N
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPFYN 207
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 95/201 (47%), Gaps = 15/201 (7%)
Query: 123 NILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEK---EFQTEVSLLGRLHHRNLVNL 178
+ LG G FG V +G A+K+L + + + E+ L H +++ L
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 179 IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPV 238
++ E++S G L + I R L+ +E ++ I G++Y H V
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYICKNGR-LDEKESRRLFQQILSGVDYCHRHMV--- 137
Query: 239 IHRDLKSANILLDHFMRAKVADFGLSKEEVFDG---RNSGLKGTYGYIDPAYISTNKFT- 294
+HRDLK N+LLD M AK+ADFGLS + DG R S G+ Y P IS +
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSN-MMSDGEFLRXSC--GSPNYAAPEVISGRLYAG 194
Query: 295 MKSDIFSFGVIIFELITAIHP 315
+ DI+S GVI++ L+ P
Sbjct: 195 PEVDIWSSGVILYALLCGTLP 215
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 119/278 (42%), Gaps = 23/278 (8%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATM-----PSGGVAAIKVLASDSHQGEKEFQTEVSLL 167
+IQ+ +G+G FG V++ P+ VA S ++F E +
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 168 GRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGI 227
+ H ++V LIG + + +I E + G L + + + L+ + A +S +
Sbjct: 66 RQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTAL 124
Query: 228 EYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK--EEVFDGRNSGLKGTYGYIDP 285
YL +HRD+ + N+L+ K+ DFGLS+ E+ + S K ++ P
Sbjct: 125 AYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAP 181
Query: 286 AYISTNKFTMKSDIFSFGVIIFE-LITAIHPHQNLMEYVNLASMSQDGVDEILD-KQLVG 343
I+ +FT SD++ FGV ++E L+ + P Q + + D + I + ++L
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV--------KNNDVIGRIENGERLPM 233
Query: 344 ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
N L + KC P +RP E+ L I
Sbjct: 234 PPNCPPT--LYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 120/253 (47%), Gaps = 12/253 (4%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQG-EKEFQTEVSLLGRLHHRNLVNLIGYC 182
LG G G V+K + PSG V A K++ + + E+ +L + +V G
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 92
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERL-QIALDISHGIEYLHEGAVPPVIHR 241
G+ + E M GSL ++ R+ E+ L ++++ + G+ YL E ++HR
Sbjct: 93 YSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYLREKH--KIMHR 148
Query: 242 DLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFS 301
D+K +NIL++ K+ DFG+S ++ D + GT Y+ P + ++++SDI+S
Sbjct: 149 DVKPSNILVNSRGEIKLCDFGVSG-QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 207
Query: 302 FGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVRELARIGHKCL 361
G+ + E+ +P + + + + V+E K G ++ E +KCL
Sbjct: 208 MGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSL----EFQDFVNKCL 263
Query: 362 HKTPRKRPSIGEV 374
K P +R + ++
Sbjct: 264 IKNPAERADLKQL 276
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 98/235 (41%), Gaps = 43/235 (18%)
Query: 124 ILGQGAFGPVYKA--TMPSGGVAAIKVLASDSHQGEK--EFQTEVSLLGRLHH------- 172
+LGQGAFG V KA + S A K+ H EK +EV LL L+H
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKI----RHTEEKLSTILSEVXLLASLNHQYVVRYY 68
Query: 173 ------RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHG 226
RN V K + E+ N +L +LI+SE +E ++ I
Sbjct: 69 AAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEA 128
Query: 227 IEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKE------------EVFDGRNS 274
+ Y+H + IHR+LK NI +D K+ DFGL+K + G +
Sbjct: 129 LSYIHSQGI---IHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 275 GLK---GTYGYIDPAYIS-TNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNL 325
L GT Y+ + T + K D +S G+I FE I+P E VN+
Sbjct: 186 NLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE---XIYPFSTGXERVNI 237
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 29/207 (14%)
Query: 125 LGQGAFGPVYKATMPSGG------VAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNL 178
LG+GAF V + G + K L++ HQ + + E + L H N+V L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQ---KLEREARICRLLKHPNIVRL 86
Query: 179 IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP- 237
++G + LI++ ++ G L I + E D SH I+ + E +
Sbjct: 87 HDSISEEGHHYLIFDLVTGGELFEDIVAREYYSE--------ADASHCIQQILEAVLHCH 138
Query: 238 ---VIHRDLKSANILLDHFMRA---KVADFGLSKEEVFDGRNS---GLKGTYGYIDPAYI 288
V+HRDLK N+LL ++ K+ADFGL+ E +G G GT GY+ P +
Sbjct: 139 QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIE--VEGEQQAWFGFAGTPGYLSPEVL 196
Query: 289 STNKFTMKSDIFSFGVIIFELITAIHP 315
+ + D+++ GVI++ L+ P
Sbjct: 197 RKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 10/197 (5%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRLHHRNLVNLIGY 181
LG+GAF V + + G+ + + ++FQ E + +L H N+V L
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 182 CVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHR 241
++ + L+++ ++ G L I + E + + I I Y H + +HR
Sbjct: 73 IQEESFHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSNGI---VHR 128
Query: 242 DLKSANILLDHFMRA---KVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSD 298
+LK N+LL + K+ADFGL+ E G GT GY+ P + + ++ D
Sbjct: 129 NLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVD 188
Query: 299 IFSFGVIIFELITAIHP 315
I++ GVI++ L+ P
Sbjct: 189 IWACGVILYILLVGYPP 205
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 121/263 (46%), Gaps = 22/263 (8%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIK-VLASDSHQGEKEFQTEVSLLGR-LHHRNLVNLIGY 181
LG+GA+G V K +PSG + A+K + A+ + Q +K ++ + R + V G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 182 CVDKGKYMLIYEFMSNGSLSNL---IYSEERVLNWEERLQIALDISHGIEYLHEGAVPPV 238
+G + E M + SL + + + + + +IA+ I +E+LH V
Sbjct: 75 LFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SV 131
Query: 239 IHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYIST----NKFT 294
IHRD+K +N+L++ + K+ DFG+S V D G Y+ P I+ ++
Sbjct: 132 IHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYS 191
Query: 295 MKSDIFSFGVIIFELITAIHPHQNL-MEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
+KSDI+S G+ + EL P+ + + L + ++ ++ + E
Sbjct: 192 VKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSA--------EF 243
Query: 354 ARIGHKCLHKTPRKRPSIGEVTQ 376
+CL K ++RP+ E+ Q
Sbjct: 244 VDFTSQCLKKNSKERPTYPELMQ 266
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 125 LGQGAFGPVYKATMPSGG------VAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNL 178
LG+G+FG V A + G + KVLA QG E E+S L L H +++ L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 78
Query: 179 IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPV 238
K + +++ E+ N L + I +++ E R + I +EY H +
Sbjct: 79 YDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHRHKI--- 133
Query: 239 IHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFT-MKS 297
+HRDLK N+LLD + K+ADFGLS G+ Y P IS + +
Sbjct: 134 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEV 193
Query: 298 DIFSFGVIIFELITAIHPHQN 318
D++S GVI++ ++ P +
Sbjct: 194 DVWSCGVILYVMLCRRLPFDD 214
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 10/197 (5%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRLHHRNLVNLIGY 181
LG+GAF V + + G+ + + ++FQ E + +L H N+V L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 182 CVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHR 241
++ + L+++ ++ G L I + E + + I I Y H + +HR
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSNGI---VHR 129
Query: 242 DLKSANILLDHFMRA---KVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSD 298
+LK N+LL + K+ADFGL+ E G GT GY+ P + + ++ D
Sbjct: 130 NLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVD 189
Query: 299 IFSFGVIIFELITAIHP 315
I++ GVI++ L+ P
Sbjct: 190 IWACGVILYILLVGYPP 206
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 125 LGQGAFGPVYKATMPSGG------VAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNL 178
LG+G+FG V A + G + KVLA QG E E+S L L H +++ L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 73
Query: 179 IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPV 238
K + +++ E+ N L + I +++ E R + I +EY H +
Sbjct: 74 YDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHRHKI--- 128
Query: 239 IHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFT-MKS 297
+HRDLK N+LLD + K+ADFGLS G+ Y P IS + +
Sbjct: 129 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEV 188
Query: 298 DIFSFGVIIFELITAIHPHQN 318
D++S GVI++ ++ P +
Sbjct: 189 DVWSCGVILYVMLCRRLPFDD 209
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 125 LGQGAFGPVYKATMPSGG------VAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNL 178
LG+G+FG V A + G + KVLA QG E E+S L L H +++ L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 69
Query: 179 IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPV 238
K + +++ E+ N L + I +++ E R + I +EY H +
Sbjct: 70 YDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHRHKI--- 124
Query: 239 IHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFT-MKS 297
+HRDLK N+LLD + K+ADFGLS G+ Y P IS + +
Sbjct: 125 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEV 184
Query: 298 DIFSFGVIIFELITAIHPHQN 318
D++S GVI++ ++ P +
Sbjct: 185 DVWSCGVILYVMLCRRLPFDD 205
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 17/199 (8%)
Query: 125 LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGEKEFQT-EVSLLGRLHHRNLVNLIGYC 182
LG G + VYK + GV A+K + DS +G E+SL+ L H N+V L
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVL-NWEERLQIAL------DISHGIEYLHEGAV 235
+ K L++EFM N Y + R + N L++ L + G+ + HE
Sbjct: 73 HTENKLTLVFEFMDNDLKK---YMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK- 128
Query: 236 PPVIHRDLKSANILLDHFMRAKVADFGLSKE-EVFDGRNSGLKGTYGYIDP-AYISTNKF 293
++HRDLK N+L++ + K+ DFGL++ + S T Y P + + +
Sbjct: 129 --ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTY 186
Query: 294 TMKSDIFSFGVIIFELITA 312
+ DI+S G I+ E+IT
Sbjct: 187 STSIDIWSCGCILAEMITG 205
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 122/285 (42%), Gaps = 23/285 (8%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATM-----PSGGVAAIKVLASDSHQGEKEFQTEVSLL 167
+IQ+ +G+G FG V++ P+ VA S ++F E +
Sbjct: 11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 70
Query: 168 GRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGI 227
+ H ++V LIG + + +I E + G L + + + L+ + A +S +
Sbjct: 71 RQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 129
Query: 228 EYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK--EEVFDGRNSGLKGTYGYIDP 285
YL +HRD+ + N+L+ K+ DFGLS+ E+ + S K ++ P
Sbjct: 130 AYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 186
Query: 286 AYISTNKFTMKSDIFSFGVIIFE-LITAIHPHQNLMEYVNLASMSQDGVDEILD-KQLVG 343
I+ +FT SD++ FGV ++E L+ + P Q + + D + I + ++L
Sbjct: 187 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV--------KNNDVIGRIENGERLPM 238
Query: 344 ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAK 388
N L + KC P +RP E+ L I + A+
Sbjct: 239 PPNCPPT--LYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKAQ 281
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 14/201 (6%)
Query: 125 LGQGAFGPVYKATMPSGG------VAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNL 178
LG+G+FG V A + G + KVLA QG E E+S L L H +++ L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 79
Query: 179 IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPV 238
K + +++ E+ N L + I +++ E R + I +EY H +
Sbjct: 80 YDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHRHKI--- 134
Query: 239 IHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFT-MKS 297
+HRDLK N+LLD + K+ADFGLS G+ Y P IS + +
Sbjct: 135 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEV 194
Query: 298 DIFSFGVIIFELITAIHPHQN 318
D++S GVI++ ++ P +
Sbjct: 195 DVWSCGVILYVMLCRRLPFDD 215
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 122/285 (42%), Gaps = 23/285 (8%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATM-----PSGGVAAIKVLASDSHQGEKEFQTEVSLL 167
+IQ+ +G+G FG V++ P+ VA S ++F E +
Sbjct: 34 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 93
Query: 168 GRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGI 227
+ H ++V LIG + + +I E + G L + + + L+ + A +S +
Sbjct: 94 RQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 152
Query: 228 EYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK--EEVFDGRNSGLKGTYGYIDP 285
YL +HRD+ + N+L+ K+ DFGLS+ E+ + S K ++ P
Sbjct: 153 AYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 209
Query: 286 AYISTNKFTMKSDIFSFGVIIFE-LITAIHPHQNLMEYVNLASMSQDGVDEILD-KQLVG 343
I+ +FT SD++ FGV ++E L+ + P Q + + D + I + ++L
Sbjct: 210 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV--------KNNDVIGRIENGERLPM 261
Query: 344 ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAK 388
N L + KC P +RP E+ L I + A+
Sbjct: 262 PPNCPPT--LYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKAQ 304
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 8/194 (4%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQG-EKEFQTEVSLLGRLHHRNLVNLIGYC 182
LG G G V+K + PSG V A K++ + + E+ +L + +V G
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 135
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERL-QIALDISHGIEYLHEGAVPPVIHR 241
G+ + E M GSL ++ R+ E+ L ++++ + G+ YL E ++HR
Sbjct: 136 YSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYLREKHK--IMHR 191
Query: 242 DLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFS 301
D+K +NIL++ K+ DFG+S ++ D + GT Y+ P + ++++SDI+S
Sbjct: 192 DVKPSNILVNSRGEIKLCDFGVSG-QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 250
Query: 302 FGVIIFELITAIHP 315
G+ + E+ +P
Sbjct: 251 MGLSLVEMAVGRYP 264
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 10/197 (5%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRLHHRNLVNLIGY 181
LG+GAF V + + G+ + + ++FQ E + +L H N+V L
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 182 CVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHR 241
++ + L+++ ++ G L I + E + + I I Y H + +HR
Sbjct: 97 IQEESFHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSNGI---VHR 152
Query: 242 DLKSANILLDHFMRA---KVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSD 298
+LK N+LL + K+ADFGL+ E G GT GY+ P + + ++ D
Sbjct: 153 NLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVD 212
Query: 299 IFSFGVIIFELITAIHP 315
I++ GVI++ L+ P
Sbjct: 213 IWACGVILYILLVGYPP 229
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 10/197 (5%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRLHHRNLVNLIGY 181
LG+GAF V + + G+ + + ++FQ E + +L H N+V L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 182 CVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHR 241
++ + L+++ ++ G L I + E + + I I Y H + +HR
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSNGI---VHR 129
Query: 242 DLKSANILLDHFMRA---KVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSD 298
+LK N+LL + K+ADFGL+ E G GT GY+ P + + ++ D
Sbjct: 130 NLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVD 189
Query: 299 IFSFGVIIFELITAIHP 315
I++ GVI++ L+ P
Sbjct: 190 IWACGVILYILLVGYPP 206
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 19/216 (8%)
Query: 121 FTNILGQGAFGPVY----KATMPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHR 173
+ +LG+G FG V KAT G A+K+L + + E TE +L H
Sbjct: 152 YLKLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 208
Query: 174 NLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
L L + + E+ + G L + S ERV + + +I ++YLH
Sbjct: 209 FLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIVSALDYLH-- 265
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN-SGLKGTYGYIDPAYISTNK 292
+ V++RDLK N++LD K+ DFGL KE + DG GT Y+ P + N
Sbjct: 266 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDND 325
Query: 293 FTMKSDIFSFGVIIFELITAIHP-----HQNLMEYV 323
+ D + GV+++E++ P H+ L E +
Sbjct: 326 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 361
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 119/278 (42%), Gaps = 23/278 (8%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATM-----PSGGVAAIKVLASDSHQGEKEFQTEVSLL 167
+IQ+ +G+G FG V++ P+ VA S ++F E +
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 168 GRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGI 227
+ H ++V LIG + + +I E + G L + + + L+ + A +S +
Sbjct: 66 RQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 124
Query: 228 EYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK--EEVFDGRNSGLKGTYGYIDP 285
YL +HRD+ + N+L+ K+ DFGLS+ E+ + S K ++ P
Sbjct: 125 AYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 181
Query: 286 AYISTNKFTMKSDIFSFGVIIFE-LITAIHPHQNLMEYVNLASMSQDGVDEILD-KQLVG 343
I+ +FT SD++ FGV ++E L+ + P Q + + D + I + ++L
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV--------KNNDVIGRIENGERLPM 233
Query: 344 ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
N L + KC P +RP E+ L I
Sbjct: 234 PPNCPPT--LYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 119/278 (42%), Gaps = 23/278 (8%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATM-----PSGGVAAIKVLASDSHQGEKEFQTEVSLL 167
+IQ+ +G+G FG V++ P+ VA S ++F E +
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 168 GRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGI 227
+ H ++V LIG + + +I E + G L + + + L+ + A +S +
Sbjct: 66 RQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTAL 124
Query: 228 EYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK--EEVFDGRNSGLKGTYGYIDP 285
YL +HRD+ + N+L+ K+ DFGLS+ E+ + S K ++ P
Sbjct: 125 AYLESKRF---VHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 181
Query: 286 AYISTNKFTMKSDIFSFGVIIFE-LITAIHPHQNLMEYVNLASMSQDGVDEILD-KQLVG 343
I+ +FT SD++ FGV ++E L+ + P Q + + D + I + ++L
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV--------KNNDVIGRIENGERLPM 233
Query: 344 ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
N L + KC P +RP E+ L I
Sbjct: 234 PPNCPPT--LYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 19/202 (9%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASD--SHQGEKEFQTEVSLLGRLHHRNLVNLIGY 181
+G+GAF V + + +G A K++ + S + ++ + E + L H N+V L
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 182 CVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP---- 237
++G + L+++ ++ G L I + E D SH I+ + E +
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSE--------ADASHCIQQILEAVLHCHQMG 123
Query: 238 VIHRDLKSANILLDHFMRA---KVADFGLSKEEVFDGRNS-GLKGTYGYIDPAYISTNKF 293
V+HRDLK N+LL + K+ADFGL+ E D + G GT GY+ P + +
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAY 183
Query: 294 TMKSDIFSFGVIIFELITAIHP 315
DI++ GVI++ L+ P
Sbjct: 184 GKPVDIWACGVILYILLVGYPP 205
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 8/194 (4%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQG-EKEFQTEVSLLGRLHHRNLVNLIGYC 182
LG G G V+K + PSG V A K++ + + E+ +L + +V G
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 100
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERL-QIALDISHGIEYLHEGAVPPVIHR 241
G+ + E M GSL ++ R+ E+ L ++++ + G+ YL E ++HR
Sbjct: 101 YSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYLREKH--KIMHR 156
Query: 242 DLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFS 301
D+K +NIL++ K+ DFG+S ++ D + GT Y+ P + ++++SDI+S
Sbjct: 157 DVKPSNILVNSRGEIKLCDFGVSG-QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 215
Query: 302 FGVIIFELITAIHP 315
G+ + E+ +P
Sbjct: 216 MGLSLVEMAVGRYP 229
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 8/194 (4%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQG-EKEFQTEVSLLGRLHHRNLVNLIGYC 182
LG G G V+K + PSG V A K++ + + E+ +L + +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERL-QIALDISHGIEYLHEGAVPPVIHR 241
G+ + E M GSL ++ R+ E+ L ++++ + G+ YL E ++HR
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIP--EQILGKVSIAVIKGLTYLREKH--KIMHR 129
Query: 242 DLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFS 301
D+K +NIL++ K+ DFG+S ++ D + GT Y+ P + ++++SDI+S
Sbjct: 130 DVKPSNILVNSRGEIKLCDFGVSG-QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 188
Query: 302 FGVIIFELITAIHP 315
G+ + E+ +P
Sbjct: 189 MGLSLVEMAVGRYP 202
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 97/217 (44%), Gaps = 19/217 (8%)
Query: 120 NFTNILGQGAFGPVY----KATMPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHH 172
+ +LG+G FG V KAT G A+K+L + + E TE +L H
Sbjct: 154 EYLKLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
L L + + E+ + G L + S ERV + + +I ++YLH
Sbjct: 211 PFLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIVSALDYLH- 268
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN-SGLKGTYGYIDPAYISTN 291
+ V++RDLK N++LD K+ DFGL KE + DG GT Y+ P + N
Sbjct: 269 -SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDN 327
Query: 292 KFTMKSDIFSFGVIIFELITAIHP-----HQNLMEYV 323
+ D + GV+++E++ P H+ L E +
Sbjct: 328 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 364
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 8/194 (4%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQG-EKEFQTEVSLLGRLHHRNLVNLIGYC 182
LG G G V K PSG + A K++ + + E+ +L + +V G
Sbjct: 24 LGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 83
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERL-QIALDISHGIEYLHEGAVPPVIHR 241
G+ + E M GSL ++ +R+ EE L ++++ + G+ YL E ++HR
Sbjct: 84 YSDGEISICMEHMDGGSLDQVLKEAKRI--PEEILGKVSIAVLRGLAYLREKHQ--IMHR 139
Query: 242 DLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFS 301
D+K +NIL++ K+ DFG+S ++ D + GT Y+ P + ++++SDI+S
Sbjct: 140 DVKPSNILVNSRGEIKLCDFGVSG-QLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWS 198
Query: 302 FGVIIFELITAIHP 315
G+ + EL +P
Sbjct: 199 MGLSLVELAVGRYP 212
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 12/202 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGE-KEFQTEVSLLGRLHH-RNLVNLIGY 181
+G+GA+G V K PSG + A+K + S + E K+ ++ ++ R +V G
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 182 CVDKGKYMLIYEFMSNG--SLSNLIYSEERVLNWEERL-QIALDISHGIEYLHEGAVPPV 238
+G + E MS +YS + EE L +I L + +L E +
Sbjct: 90 LFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KI 147
Query: 239 IHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYI----STNKFT 294
IHRD+K +NILLD K+ DFG+S + V + G Y+ P I S +
Sbjct: 148 IHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYD 207
Query: 295 MKSDIFSFGVIIFELITAIHPH 316
++SD++S G+ ++EL T P+
Sbjct: 208 VRSDVWSLGITLYELATGRFPY 229
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 119/278 (42%), Gaps = 23/278 (8%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATM-----PSGGVAAIKVLASDSHQGEKEFQTEVSLL 167
+IQ+ +G+G FG V++ P+ VA S ++F E +
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 168 GRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGI 227
+ H ++V LIG + + +I E + G L + + + L+ + A +S +
Sbjct: 66 RQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 124
Query: 228 EYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK--EEVFDGRNSGLKGTYGYIDP 285
YL +HRD+ + N+L+ K+ DFGLS+ E+ + S K ++ P
Sbjct: 125 AYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 181
Query: 286 AYISTNKFTMKSDIFSFGVIIFE-LITAIHPHQNLMEYVNLASMSQDGVDEILD-KQLVG 343
I+ +FT SD++ FGV ++E L+ + P Q + + D + I + ++L
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV--------KNNDVIGRIENGERLPM 233
Query: 344 ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
N L + KC P +RP E+ L I
Sbjct: 234 PPNCPPT--LYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 8/194 (4%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQG-EKEFQTEVSLLGRLHHRNLVNLIGYC 182
LG G G V+K + PSG V A K++ + + E+ +L + +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERL-QIALDISHGIEYLHEGAVPPVIHR 241
G+ + E M GSL ++ R+ E+ L ++++ + G+ YL E ++HR
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYLREKH--KIMHR 129
Query: 242 DLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFS 301
D+K +NIL++ K+ DFG+S ++ D + GT Y+ P + ++++SDI+S
Sbjct: 130 DVKPSNILVNSRGEIKLCDFGVSG-QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 188
Query: 302 FGVIIFELITAIHP 315
G+ + E+ +P
Sbjct: 189 MGLSLVEMAVGRYP 202
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 122/268 (45%), Gaps = 39/268 (14%)
Query: 125 LGQGAFG-PVYKATMPSGGVAAIKVL--ASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGY 181
+G+G+FG + + G IK + + S + +E + EV++L + H N+V
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 182 CVDKGKYMLIYEFMSNGSL-------SNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
+ G ++ ++ G L +++ E+++L+W +QI L + H +H+
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW--FVQICLALKH----VHDRK 145
Query: 235 VPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK------GTYGYIDPAYI 288
+ +HRD+KS NI L ++ DFG+++ NS ++ GT Y+ P
Sbjct: 146 I---LHRDIKSQNIFLTKDGTVQLGDFGIARV-----LNSTVELARACIGTPYYLSPEIC 197
Query: 289 STNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQ 348
+ KSDI++ G +++EL T H + A ++ V +I+ ++
Sbjct: 198 ENKPYNNKSDIWALGCVLYELCTLKHAFE--------AGSMKNLVLKIISGSF-PPVSLH 248
Query: 349 EVRELARIGHKCLHKTPRKRPSIGEVTQ 376
+L + + + PR RPS+ + +
Sbjct: 249 YSYDLRSLVSQLFKRNPRDRPSVNSILE 276
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 8/194 (4%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQG-EKEFQTEVSLLGRLHHRNLVNLIGYC 182
LG G G V+K + PSG V A K++ + + E+ +L + +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERL-QIALDISHGIEYLHEGAVPPVIHR 241
G+ + E M GSL ++ R+ E+ L ++++ + G+ YL E ++HR
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYLREKH--KIMHR 129
Query: 242 DLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFS 301
D+K +NIL++ K+ DFG+S ++ D + GT Y+ P + ++++SDI+S
Sbjct: 130 DVKPSNILVNSRGEIKLCDFGVSG-QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 188
Query: 302 FGVIIFELITAIHP 315
G+ + E+ +P
Sbjct: 189 MGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 8/194 (4%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQG-EKEFQTEVSLLGRLHHRNLVNLIGYC 182
LG G G V+K + PSG V A K++ + + E+ +L + +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERL-QIALDISHGIEYLHEGAVPPVIHR 241
G+ + E M GSL ++ R+ E+ L ++++ + G+ YL E ++HR
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYLREKH--KIMHR 129
Query: 242 DLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFS 301
D+K +NIL++ K+ DFG+S ++ D + GT Y+ P + ++++SDI+S
Sbjct: 130 DVKPSNILVNSRGEIKLCDFGVSG-QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 188
Query: 302 FGVIIFELITAIHP 315
G+ + E+ +P
Sbjct: 189 MGLSLVEMAVGRYP 202
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 8/194 (4%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQG-EKEFQTEVSLLGRLHHRNLVNLIGYC 182
LG G G V+K + PSG V A K++ + + E+ +L + +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERL-QIALDISHGIEYLHEGAVPPVIHR 241
G+ + E M GSL ++ R+ E+ L ++++ + G+ YL E ++HR
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYLREKH--KIMHR 129
Query: 242 DLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFS 301
D+K +NIL++ K+ DFG+S ++ D + GT Y+ P + ++++SDI+S
Sbjct: 130 DVKPSNILVNSRGEIKLCDFGVSG-QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWS 188
Query: 302 FGVIIFELITAIHP 315
G+ + E+ +P
Sbjct: 189 MGLSLVEMAVGRYP 202
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 120/286 (41%), Gaps = 22/286 (7%)
Query: 105 GIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGG----VAAIKVLASDSHQGEKE- 159
G P+Y I + ILG+G FG VY+ + A+K D KE
Sbjct: 15 GSPQYG---IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK 71
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQI 219
F +E ++ L H ++V LIG +++ +I E G L + + + L +
Sbjct: 72 FMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY 130
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK--EEVFDGRNSGLK 277
+L I + YL +HRD+ NIL+ K+ DFGLS+ E+ + S +
Sbjct: 131 SLQICKAMAYLESINC---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTR 187
Query: 278 GTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEIL 337
++ P I+ +FT SD++ F V ++E+++ +E ++ + + G D +
Sbjct: 188 LPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKG-DRLP 246
Query: 338 DKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQ 383
L L + +C P RP E+ +L + Q
Sbjct: 247 KPDLCPPV-------LYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 285
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 122/258 (47%), Gaps = 26/258 (10%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQG-EKEFQTEVSLLGRLHHRNLVNLIGYC 182
LG G G V+K + PSG V A K++ + + E+ +L + +V G
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERL-QIALDISHGIEYLHEGAVPPVIHR 241
G+ + E M GSL ++ R+ E+ L ++++ + G+ YL E ++HR
Sbjct: 77 YSDGEISICMEHMDGGSLDQVLKKAGRI--PEQILGKVSIAVIKGLTYLREKH--KIMHR 132
Query: 242 DLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFS 301
D+K +NIL++ K+ DFG+S ++ D + GT Y+ P + ++++SDI+S
Sbjct: 133 DVKPSNILVNSRGEIKLCDFGVSG-QLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWS 191
Query: 302 FGVIIFELITAIHPHQ-----NLMEYVNLASMSQDGVDEILDKQLVGACNIQEVRELARI 356
G+ + E+ +P L++Y+ V+E K L A E ++
Sbjct: 192 MGLSLVEMAVGRYPRPPMAIFELLDYI---------VNEPPPK-LPSAVFSLEFQDFV-- 239
Query: 357 GHKCLHKTPRKRPSIGEV 374
+KCL K P +R + ++
Sbjct: 240 -NKCLIKNPAERADLKQL 256
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 97/217 (44%), Gaps = 19/217 (8%)
Query: 120 NFTNILGQGAFGPVY----KATMPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHH 172
+ +LG+G FG V KAT G A+K+L + + E TE +L H
Sbjct: 11 EYLKLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
L L + + E+ + G L + S ERV + + +I ++YLH
Sbjct: 68 PFLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIVSALDYLH- 125
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN-SGLKGTYGYIDPAYISTN 291
+ V++RDLK N++LD K+ DFGL KE + DG GT Y+ P + N
Sbjct: 126 -SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDN 184
Query: 292 KFTMKSDIFSFGVIIFELITAIHP-----HQNLMEYV 323
+ D + GV+++E++ P H+ L E +
Sbjct: 185 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 221
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 121/263 (46%), Gaps = 22/263 (8%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIK-VLASDSHQGEKEFQTEVSLLGR-LHHRNLVNLIGY 181
LG+GA+G V K +PSG + A+K + A+ + Q +K ++ + R + V G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 182 CVDKGKYMLIYEFMSNGSLSNL---IYSEERVLNWEERLQIALDISHGIEYLHEGAVPPV 238
+G + E M + SL + + + + + +IA+ I +E+LH V
Sbjct: 119 LFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--V 175
Query: 239 IHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYIST----NKFT 294
IHRD+K +N+L++ + K+ DFG+S V + G Y+ P I+ ++
Sbjct: 176 IHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYS 235
Query: 295 MKSDIFSFGVIIFELITAIHPHQNL-MEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
+KSDI+S G+ + EL P+ + + L + ++ ++ + E
Sbjct: 236 VKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSA--------EF 287
Query: 354 ARIGHKCLHKTPRKRPSIGEVTQ 376
+CL K ++RP+ E+ Q
Sbjct: 288 VDFTSQCLKKNSKERPTYPELMQ 310
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 97/217 (44%), Gaps = 19/217 (8%)
Query: 120 NFTNILGQGAFGPVY----KATMPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHH 172
+ +LG+G FG V KAT G A+K+L + + E TE +L H
Sbjct: 12 EYLKLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
L L + + E+ + G L + S ERV + + +I ++YLH
Sbjct: 69 PFLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIVSALDYLH- 126
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN-SGLKGTYGYIDPAYISTN 291
+ V++RDLK N++LD K+ DFGL KE + DG GT Y+ P + N
Sbjct: 127 -SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDN 185
Query: 292 KFTMKSDIFSFGVIIFELITAIHP-----HQNLMEYV 323
+ D + GV+++E++ P H+ L E +
Sbjct: 186 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 222
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 97/217 (44%), Gaps = 19/217 (8%)
Query: 120 NFTNILGQGAFGPVY----KATMPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHH 172
+ +LG+G FG V KAT G A+K+L + + E TE +L H
Sbjct: 13 EYLKLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
L L + + E+ + G L + S ERV + + +I ++YLH
Sbjct: 70 PFLTALKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGAEIVSALDYLH- 127
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN-SGLKGTYGYIDPAYISTN 291
+ V++RDLK N++LD K+ DFGL KE + DG GT Y+ P + N
Sbjct: 128 -SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDN 186
Query: 292 KFTMKSDIFSFGVIIFELITAIHP-----HQNLMEYV 323
+ D + GV+++E++ P H+ L E +
Sbjct: 187 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 223
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 29/207 (14%)
Query: 125 LGQGAFGPVYKATMPSGG------VAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNL 178
LG+GAF V + G + K L++ HQ + + E + L H N+V L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQ---KLEREARICRLLKHPNIVRL 75
Query: 179 IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP- 237
++G + LI++ ++ G L I + E D SH I+ + E +
Sbjct: 76 HDSISEEGHHYLIFDLVTGGELFEDIVAREYYSE--------ADASHCIQQILEAVLHCH 127
Query: 238 ---VIHRDLKSANILLDHFMRA---KVADFGLSKEEVFDGRNS---GLKGTYGYIDPAYI 288
V+HR+LK N+LL ++ K+ADFGL+ E +G G GT GY+ P +
Sbjct: 128 QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIE--VEGEQQAWFGFAGTPGYLSPEVL 185
Query: 289 STNKFTMKSDIFSFGVIIFELITAIHP 315
+ + D+++ GVI++ L+ P
Sbjct: 186 RKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 9/196 (4%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLVNLIGYC 182
+G G F V A + +G + AIK++ ++ + +TE+ L L H+++ L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRD 242
K ++ E+ G L + I S++R L+ EE + I + Y+H HRD
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDR-LSEEETRVVFRQIVSAVAYVHSQGYA---HRD 133
Query: 243 LKSANILLDHFMRAKVADFGLSKEEV--FDGRNSGLKGTYGYIDPAYISTNKFT-MKSDI 299
LK N+L D + + K+ DFGL + D G+ Y P I + ++D+
Sbjct: 134 LKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADV 193
Query: 300 FSFGVIIFELITAIHP 315
+S G++++ L+ P
Sbjct: 194 WSMGILLYVLMCGFLP 209
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 121/288 (42%), Gaps = 22/288 (7%)
Query: 103 ASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGG----VAAIKVLASDSHQGEK 158
+ G P+Y I + ILG+G FG VY+ + A+K D K
Sbjct: 1 SMGGPQYG---IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK 57
Query: 159 E-FQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERL 217
E F +E ++ L H ++V LIG +++ +I E G L + + + L +
Sbjct: 58 EKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLV 116
Query: 218 QIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK--EEVFDGRNSG 275
+L I + YL +HRD+ NIL+ K+ DFGLS+ E+ + S
Sbjct: 117 LYSLQICKAMAYLESINC---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV 173
Query: 276 LKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDE 335
+ ++ P I+ +FT SD++ F V ++E+++ +E ++ + + G D
Sbjct: 174 TRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKG-DR 232
Query: 336 ILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQ 383
+ L L + +C P RP E+ +L + Q
Sbjct: 233 LPKPDLCPPV-------LYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 111/267 (41%), Gaps = 29/267 (10%)
Query: 121 FTNILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEKE-FQTEVSLLGRLHHRNLVNL 178
F LG GAFG V+ S G+ IK + D Q E + E+ +L L H N++ +
Sbjct: 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 179 IGYCVDKGKYMLIYEFMSNGSLSNLIYSEE---RVLNWEERLQIALDISHGIEYLHEGAV 235
D ++ E G L I S + + L+ ++ + + + Y H
Sbjct: 86 FEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH- 144
Query: 236 PPVIHRDLKSANILLDH---FMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNK 292
V+H+DLK NIL K+ DFGL++ D ++ GT Y+ P +
Sbjct: 145 --VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRD- 201
Query: 293 FTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQ-EVR 351
T K DI+S GV+++ L+T P + ++E+ K N E R
Sbjct: 202 VTFKCDIWSAGVVMYFLLTGCLP------------FTGTSLEEVQQKATYKEPNYAVECR 249
Query: 352 ELA----RIGHKCLHKTPRKRPSIGEV 374
L + + L K P +RPS +V
Sbjct: 250 PLTPQAVDLLKQMLTKDPERRPSAAQV 276
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 119/278 (42%), Gaps = 23/278 (8%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATM-----PSGGVAAIKVLASDSHQGEKEFQTEVSLL 167
+IQ+ +G+G FG V++ P+ VA S ++F E +
Sbjct: 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 445
Query: 168 GRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGI 227
+ H ++V LIG + + +I E + G L + + + L+ + A +S +
Sbjct: 446 RQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTAL 504
Query: 228 EYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK--EEVFDGRNSGLKGTYGYIDP 285
YL +HRD+ + N+L+ K+ DFGLS+ E+ + S K ++ P
Sbjct: 505 AYLESKRF---VHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 561
Query: 286 AYISTNKFTMKSDIFSFGVIIFE-LITAIHPHQNLMEYVNLASMSQDGVDEILD-KQLVG 343
I+ +FT SD++ FGV ++E L+ + P Q + + D + I + ++L
Sbjct: 562 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV--------KNNDVIGRIENGERLPM 613
Query: 344 ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
N L + KC P +RP E+ L I
Sbjct: 614 PPNCPPT--LYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 119/278 (42%), Gaps = 23/278 (8%)
Query: 113 DIQKATQNFTNILGQGAFGPVYKATM-----PSGGVAAIKVLASDSHQGEKEFQTEVSLL 167
+IQ+ +G+G FG V++ P+ VA S ++F E +
Sbjct: 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 445
Query: 168 GRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGI 227
+ H ++V LIG + + +I E + G L + + + L+ + A +S +
Sbjct: 446 RQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTAL 504
Query: 228 EYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK--EEVFDGRNSGLKGTYGYIDP 285
YL +HRD+ + N+L+ K+ DFGLS+ E+ + S K ++ P
Sbjct: 505 AYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 561
Query: 286 AYISTNKFTMKSDIFSFGVIIFE-LITAIHPHQNLMEYVNLASMSQDGVDEILD-KQLVG 343
I+ +FT SD++ FGV ++E L+ + P Q + + D + I + ++L
Sbjct: 562 ESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV--------KNNDVIGRIENGERLPM 613
Query: 344 ACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKI 381
N L + KC P +RP E+ L I
Sbjct: 614 PPNCPPT--LYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 18/234 (7%)
Query: 120 NFTNILGQGAFGPVYKATMPSGGV-AAIKVLASDS---HQGEKEFQTEVS-LLGRLHHRN 174
+F ++G+G+FG V A + V A+KVL + + EK +E + LL + H
Sbjct: 41 HFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPF 100
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
LV L K + ++++ G L + E L R A +I+ + YLH
Sbjct: 101 LVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAA-EIASALGYLHSLN 159
Query: 235 VPPVIHRDLKSANILLDHFMRAKVADFGLSKEEV-FDGRNSGLKGTYGYIDPAYISTNKF 293
+ ++RDLK NILLD + DFGL KE + + S GT Y+ P + +
Sbjct: 160 I---VYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPY 216
Query: 294 TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNI 347
D + G +++E++ + P + N A M D IL+K L NI
Sbjct: 217 DRTVDWWCLGAVLYEMLYGLPPFYS----RNTAEM----YDNILNKPLQLKPNI 262
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 119/284 (41%), Gaps = 22/284 (7%)
Query: 107 PRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGG----VAAIKVLASDSHQGEKE-FQ 161
P+Y I + ILG+G FG VY+ + A+K D KE F
Sbjct: 1 PQYG---IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFM 57
Query: 162 TEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
+E ++ L H ++V LIG +++ +I E G L + + + L + +L
Sbjct: 58 SEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSL 116
Query: 222 DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK--EEVFDGRNSGLKGT 279
I + YL +HRD+ NIL+ K+ DFGLS+ E+ + S +
Sbjct: 117 QICKAMAYLESINC---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP 173
Query: 280 YGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDK 339
++ P I+ +FT SD++ F V ++E+++ +E ++ + + G D +
Sbjct: 174 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKG-DRLPKP 232
Query: 340 QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQ 383
L L + +C P RP E+ +L + Q
Sbjct: 233 DLCPPV-------LYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 269
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 125 LGQGAFGPVYKATM--PSGGVA--AIKVLASD---SHQGEKEFQTEVSLLGRLHHRNLVN 177
LG G+FG V + PSG A+K L D + +F EV+ + L HRNL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
L G + M + E GSL + + + + A+ ++ G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF-- 132
Query: 238 VIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGL----KGTYGYIDPAYISTNKF 293
IHRDL + N+LL K+ DFGL + + + + K + + P + T F
Sbjct: 133 -IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTF 191
Query: 294 TMKSDIFSFGVIIFELIT 311
+ SD + FGV ++E+ T
Sbjct: 192 SHASDTWMFGVTLWEMFT 209
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 125 LGQGAFGPVYKATM--PSGGVA--AIKVLASD---SHQGEKEFQTEVSLLGRLHHRNLVN 177
LG G+FG V + PSG A+K L D + +F EV+ + L HRNL+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
L G + M + E GSL + + + + A+ ++ G+ YL
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF-- 142
Query: 238 VIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGL----KGTYGYIDPAYISTNKF 293
IHRDL + N+LL K+ DFGL + + + + K + + P + T F
Sbjct: 143 -IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTF 201
Query: 294 TMKSDIFSFGVIIFELIT 311
+ SD + FGV ++E+ T
Sbjct: 202 SHASDTWMFGVTLWEMFT 219
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 101/233 (43%), Gaps = 31/233 (13%)
Query: 102 SASGIPRYAYK--------DIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVL--AS 151
SA PR A + DI ++G+G FG VY G AI+++
Sbjct: 10 SARSFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRW--HGEVAIRLIDIER 67
Query: 152 DSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVL 211
D+ K F+ EV + H N+V +G C+ +I +L +++ + VL
Sbjct: 68 DNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVL 127
Query: 212 NWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGL-SKEEVFD 270
+ + QIA +I G+ YLH ++H+DLKS N+ D+ + + DFGL S V
Sbjct: 128 DVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYDN-GKVVITDFGLFSISGVLQ 183
Query: 271 G--RNSGLK---GTYGYIDPAYI---------STNKFTMKSDIFSFGVIIFEL 309
R L+ G ++ P I F+ SD+F+ G I +EL
Sbjct: 184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 118/263 (44%), Gaps = 22/263 (8%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIK-VLASDSHQGEKEFQTEVSLLGR-LHHRNLVNLIGY 181
LG+GA+G V K +PSG + A+K + A+ + Q +K ++ + R + V G
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 182 CVDKGKYMLIYEFMSNGSLSNL---IYSEERVLNWEERLQIALDISHGIEYLHEGAVPPV 238
+G + E + + SL + + + + + +IA+ I +E+LH V
Sbjct: 102 LFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--V 158
Query: 239 IHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYIST----NKFT 294
IHRD+K +N+L++ + K DFG+S V D G Y P I+ ++
Sbjct: 159 IHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKGYS 218
Query: 295 MKSDIFSFGVIIFELITAIHPHQNL-MEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
+KSDI+S G+ EL P+ + + L + ++ ++ + E
Sbjct: 219 VKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSA--------EF 270
Query: 354 ARIGHKCLHKTPRKRPSIGEVTQ 376
+CL K ++RP+ E+ Q
Sbjct: 271 VDFTSQCLKKNSKERPTYPELXQ 293
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 125 LGQGAFGPVYKATM--PSGGVA--AIKVLASD---SHQGEKEFQTEVSLLGRLHHRNLVN 177
LG G+FG V + PSG A+K L D + +F EV+ + L HRNL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
L G + M + E GSL + + + + A+ ++ G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF-- 132
Query: 238 VIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGL----KGTYGYIDPAYISTNKF 293
IHRDL + N+LL K+ DFGL + + + + K + + P + T F
Sbjct: 133 -IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF 191
Query: 294 TMKSDIFSFGVIIFELIT 311
+ SD + FGV ++E+ T
Sbjct: 192 SHASDTWMFGVTLWEMFT 209
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 125 LGQGAFGPVYKATM--PSGGVA--AIKVLASD---SHQGEKEFQTEVSLLGRLHHRNLVN 177
LG G+FG V + PSG A+K L D + +F EV+ + L HRNL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
L G + M + E GSL + + + + A+ ++ G+ YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF-- 136
Query: 238 VIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGL----KGTYGYIDPAYISTNKF 293
IHRDL + N+LL K+ DFGL + + + + K + + P + T F
Sbjct: 137 -IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF 195
Query: 294 TMKSDIFSFGVIIFELIT 311
+ SD + FGV ++E+ T
Sbjct: 196 SHASDTWMFGVTLWEMFT 213
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 125 LGQGAFGPVYKATM--PSGGVA--AIKVLASD---SHQGEKEFQTEVSLLGRLHHRNLVN 177
LG G+FG V + PSG A+K L D + +F EV+ + L HRNL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
L G + M + E GSL + + + + A+ ++ G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF-- 132
Query: 238 VIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGL----KGTYGYIDPAYISTNKF 293
IHRDL + N+LL K+ DFGL + + + + K + + P + T F
Sbjct: 133 -IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF 191
Query: 294 TMKSDIFSFGVIIFELIT 311
+ SD + FGV ++E+ T
Sbjct: 192 SHASDTWMFGVTLWEMFT 209
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 125 LGQGAFGPVYKATM--PSGGVA--AIKVLASD---SHQGEKEFQTEVSLLGRLHHRNLVN 177
LG G+FG V + PSG A+K L D + +F EV+ + L HRNL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
L G + M + E GSL + + + + A+ ++ G+ YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF-- 136
Query: 238 VIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGL----KGTYGYIDPAYISTNKF 293
IHRDL + N+LL K+ DFGL + + + + K + + P + T F
Sbjct: 137 -IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF 195
Query: 294 TMKSDIFSFGVIIFELIT 311
+ SD + FGV ++E+ T
Sbjct: 196 SHASDTWMFGVTLWEMFT 213
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 15/198 (7%)
Query: 125 LGQGAFGPVYKATM--PSGGVA--AIKVLASD---SHQGEKEFQTEVSLLGRLHHRNLVN 177
LG G+FG V + PSG A+K L D + +F EV+ + L HRNL+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
L G + M + E GSL + + + + A+ ++ G+ YL
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF-- 142
Query: 238 VIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGL----KGTYGYIDPAYISTNKF 293
IHRDL + N+LL K+ DFGL + + + + K + + P + T F
Sbjct: 143 -IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF 201
Query: 294 TMKSDIFSFGVIIFELIT 311
+ SD + FGV ++E+ T
Sbjct: 202 SHASDTWMFGVTLWEMFT 219
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 125 LGQGAFGPVYKAT--MPSGGVAA----IKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNL 178
LG+GAF V + P+ AA K L++ HQ + + E + L H N+V L
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQ---KLEREARICRLLKHPNIVRL 95
Query: 179 IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPV 238
++G + L+++ ++ G L I + E + I I + ++H+ +
Sbjct: 96 HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIH-QILESVNHIHQHDI--- 151
Query: 239 IHRDLKSANILLDHFMRA---KVADFGLSKEEVFDGRNS---GLKGTYGYIDPAYISTNK 292
+HRDLK N+LL + K+ADFGL+ E G G GT GY+ P + +
Sbjct: 152 VHRDLKPENLLLASKCKGAAVKLADFGLAIE--VQGEQQAWFGFAGTPGYLSPEVLRKDP 209
Query: 293 FTMKSDIFSFGVIIFELITAIHP 315
+ DI++ GVI++ L+ P
Sbjct: 210 YGKPVDIWACGVILYILLVGYPP 232
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 124/270 (45%), Gaps = 27/270 (10%)
Query: 119 QNFT--NILGQGAFGPVYKATMPSG----GVAAIKVLASDS----HQGEKEFQTEVSLLG 168
+NF +LG GA+G V+ SG + A+KVL + + + +TE +L
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 169 RLHHRNLVNLIGYCVD-KGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGI 227
+ + + Y + K LI ++++ G L + ER E ++ + +I +
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVG-EIVLAL 172
Query: 228 EYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFD--GRNSGLKGTYGYIDP 285
E+LH+ + I+RD+K NILLD + DFGLSKE V D R GT Y+ P
Sbjct: 173 EHLHKLGI---IYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAP 229
Query: 286 AYI--STNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVG 343
+ + D +S GV+++EL+T P E + A +S+ IL +
Sbjct: 230 DIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR----RILKSE--- 282
Query: 344 ACNIQEVRELAR-IGHKCLHKTPRKRPSIG 372
QE+ LA+ + + L K P+KR G
Sbjct: 283 PPYPQEMSALAKDLIQRLLMKDPKKRLGCG 312
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 103/231 (44%), Gaps = 23/231 (9%)
Query: 98 TSAP-SASGIPRYAYKDIQK-ATQNFTNI---LGQGAFGPVYKATMP-SGGVAAIKVLAS 151
++AP +AS +P Y + A +F + LG+GA VY+ + A+KVL
Sbjct: 29 SAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKK 88
Query: 152 DSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLI----YSE 207
+ K +TE+ +L RL H N++ L + L+ E ++ G L + I Y
Sbjct: 89 TVDK--KIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYS 146
Query: 208 ERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHF---MRAKVADFGLS 264
ER + I + YLHE ++HRDLK N+L K+ADFGLS
Sbjct: 147 ER-----DAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLS 198
Query: 265 KEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHP 315
K + GT GY P + + + D++S G+I + L+ P
Sbjct: 199 KIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 26/263 (9%)
Query: 125 LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
+G G+FG VY A + + V AIK ++ Q +++Q EV L +L H N + G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
+ + L+ E+ GS S+L+ ++ L E + G+ YLH + IH
Sbjct: 83 CYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM---IH 138
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYI---STNKFTMKS 297
RD+K+ NILL K+ DFG + + GT ++ P I ++ K
Sbjct: 139 RDVKAGNILLSEPGLVKLGDFGSAS---IMAPANXFVGTPYWMAPEVILAMDEGQYDGKV 195
Query: 298 DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVRELARIG 357
D++S G+ EL P N+ L ++Q+ + + + + E
Sbjct: 196 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQN------ESPALQSGHWSEY--FRNFV 247
Query: 358 HKCLHKTPRKRPSIGEVTQALLK 380
CL K P+ RP+ ++ LLK
Sbjct: 248 DSCLQKIPQDRPT----SEVLLK 266
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 16/207 (7%)
Query: 117 ATQNFTNI--LGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQT--EVSLLGRLH 171
AT + + +G GA+G VYKA P SG A+K + + + T EV+LL RL
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 172 ---HRNLVNLIGYCVDKG-----KYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDI 223
H N+V L+ C K L++E + + L + L E +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYI 283
G+++LH + +HRDLK NIL+ K+ADFGL++ + + + T Y
Sbjct: 122 LRGLDFLHANCI---VHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYR 178
Query: 284 DPAYISTNKFTMKSDIFSFGVIIFELI 310
P + + + D++S G I E+
Sbjct: 179 APEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 26/263 (9%)
Query: 125 LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
+G G+FG VY A + + V AIK ++ Q +++Q EV L +L H N + G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
+ + L+ E+ GS S+L+ ++ L E + G+ YLH + IH
Sbjct: 122 CYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM---IH 177
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYI---STNKFTMKS 297
RD+K+ NILL K+ DFG + + GT ++ P I ++ K
Sbjct: 178 RDVKAGNILLSEPGLVKLGDFGSAS---IMAPANXFVGTPYWMAPEVILAMDEGQYDGKV 234
Query: 298 DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVRELARIG 357
D++S G+ EL P N+ L ++Q+ + + + + E
Sbjct: 235 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQN------ESPALQSGHWSEY--FRNFV 286
Query: 358 HKCLHKTPRKRPSIGEVTQALLK 380
CL K P+ RP+ ++ LLK
Sbjct: 287 DSCLQKIPQDRPT----SEVLLK 305
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 145/325 (44%), Gaps = 47/325 (14%)
Query: 97 FTSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQG 156
T++ S SG+P + I + T +G+G FG V++ G A+K+ +S +
Sbjct: 10 MTTSGSGSGLPLLVQRTIAR-TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSS---RE 64
Query: 157 EKEF--QTEVSLLGRLHHRNLVNLIGY-CVDKGKY---MLIYEFMSNGSLSNLIYSEERV 210
E+ + + E+ L H N++ I D G + L+ ++ +GSL + Y
Sbjct: 65 ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFD--YLNRYT 122
Query: 211 LNWEERLQIALDISHGIEYLHEGAV-----PPVIHRDLKSANILLDHFMRAKVADFGL-- 263
+ E +++AL + G+ +LH V P + HRDLKS NIL+ +AD GL
Sbjct: 123 VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 182
Query: 264 ---SKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMK-------SDIFSFGVIIFEL---- 309
S + D + GT Y+ P + + MK +DI++ G++ +E+
Sbjct: 183 RHDSATDTIDIAPNHRVGTKRYMAPEVLD-DSINMKHFESFKRADIYAMGLVFWEIARRC 241
Query: 310 -ITAIHPHQNLMEYVNLASMSQDGVDE----ILDKQLVGAC-----NIQEVRELARIGHK 359
I IH L Y +L S V+E + +++L + + +R +A+I +
Sbjct: 242 SIGGIHEDYQL-PYYDLVP-SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRE 299
Query: 360 CLHKTPRKRPSIGEVTQALLKIKQR 384
C + R + + + L ++ Q+
Sbjct: 300 CWYANGAARLTALRIKKTLSQLSQQ 324
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 101/244 (41%), Gaps = 13/244 (5%)
Query: 170 LHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEY 229
L H N+V + ++ E+ S G L I + R E R IS G+ Y
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-GVSY 130
Query: 230 LHEGAVPPVIHRDLKSANILLD--HFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAY 287
H V HRDLK N LLD R K+ADFG SK V + GT YI P
Sbjct: 131 AHAMQV---AHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEV 187
Query: 288 ISTNKFTMK-SDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACN 346
+ ++ K +D++S GV ++ ++ +P ++ E N + + IL+ Q
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNF----RKTIHRILNVQYAIPDY 243
Query: 347 IQEVRELARIGHKCLHKTPRKRPSIGEVT--QALLKIKQRHLAKQDTMSFADGEFSRAVS 404
+ E + + P KR SI E+ + LK L +TM+ E +
Sbjct: 244 VHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFDESDQPGQ 303
Query: 405 RIED 408
IE+
Sbjct: 304 SIEE 307
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 27/226 (11%)
Query: 125 LGQGAFGPVYKATMPSGG--VAAIKVLASDSHQG-EKEFQTEVSLLGRLHHRNLVNLIGY 181
+GQG FG V+KA G VA KVL + +G E+ +L L H N+VNLI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 182 CVDK--------GKYMLIYEFMSN---GSLSNLIYSEERVLNWEERLQIALDISHGIEYL 230
C K G L+++F + G LSN++ E ++ + +G+ Y+
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK----FTLSEIKRVMQMLLNGLYYI 141
Query: 231 HEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDP 285
H + +HRD+K+AN+L+ K+ADFGL++ + R T Y P
Sbjct: 142 HRNKI---LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 286 AYISTNK-FTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQ 330
+ + + D++ G I+ E+ T Q E LA +SQ
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ 244
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 27/226 (11%)
Query: 125 LGQGAFGPVYKATMPSGG--VAAIKVLASDSHQG-EKEFQTEVSLLGRLHHRNLVNLIGY 181
+GQG FG V+KA G VA KVL + +G E+ +L L H N+VNLI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 182 CVDK--------GKYMLIYEFMSN---GSLSNLIYSEERVLNWEERLQIALDISHGIEYL 230
C K G L+++F + G LSN++ E ++ + +G+ Y+
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK----FTLSEIKRVMQMLLNGLYYI 141
Query: 231 HEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDP 285
H + +HRD+K+AN+L+ K+ADFGL++ + R T Y P
Sbjct: 142 HRNKI---LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 286 AYISTNK-FTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQ 330
+ + + D++ G I+ E+ T Q E LA +SQ
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ 244
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 136/334 (40%), Gaps = 92/334 (27%)
Query: 125 LGQGAFGPVYKATM------PSGGVAAIKVLASDSHQGE-KEFQTEVSLLGRL-HHRNLV 176
LG+GAFG V +A+ P+ A+K+L + E K TE+ +L + HH N+V
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 177 N--------------LIGYC------------------------------------VDKG 186
N ++ YC +++G
Sbjct: 95 NLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHMEPKKEKMEPGLEQG 154
Query: 187 KYMLIYEFMSNGSLSNLIYSEERVLN-----------------WEERLQIALDISHGIEY 229
K + S+ S ++ + E++ L+ E+ + + ++ G+E+
Sbjct: 155 KKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEF 214
Query: 230 LHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKG----TYGYIDP 285
L IHRDL + NILL K+ DFGL++ +++ + KG ++ P
Sbjct: 215 LSSRKC---IHRDLAARNILLSENNVVKICDFGLAR-DIYKNPDYVRKGDTRLPLKWMAP 270
Query: 286 AYISTNKFTMKSDIFSFGVIIFELIT-AIHPHQNLMEYVNLASMSQDGVDEILDKQLVGA 344
I ++ KSD++S+GV+++E+ + P+ + M +D + + + A
Sbjct: 271 ESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGV-------QMDEDFCSRLREGMRMRA 323
Query: 345 CNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
E+ +I C H+ P++RP E+ + L
Sbjct: 324 PEYS-TPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 16/207 (7%)
Query: 117 ATQNFTNI--LGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQT--EVSLLGRLH 171
AT + + +G GA+G VYKA P SG A+K + + + T EV+LL RL
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 172 ---HRNLVNLIGYCVDKG-----KYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDI 223
H N+V L+ C K L++E + + L + L E +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYI 283
G+++LH + +HRDLK NIL+ K+ADFGL++ + + T Y
Sbjct: 122 LRGLDFLHANCI---VHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYR 178
Query: 284 DPAYISTNKFTMKSDIFSFGVIIFELI 310
P + + + D++S G I E+
Sbjct: 179 APEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 28/216 (12%)
Query: 108 RYAYKDIQKATQNFTNILGQGAFGPVYKAT-MPSGGVAAIKVLAS--DSHQGEKEFQTEV 164
R Y+D+Q +G GA+G V A +G AIK L S K E+
Sbjct: 24 RAVYRDLQP--------VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYREL 75
Query: 165 SLLGRLHHRNLVNLIGYCV------DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQ 218
LL + H N++ L+ D + L+ FM L L+ E+ E+R+Q
Sbjct: 76 RLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGT-DLGKLMKHEKL---GEDRIQ 131
Query: 219 -IALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK 277
+ + G+ Y+H + IHRDLK N+ ++ K+ DFGL+++ D G
Sbjct: 132 FLVYQMLKGLRYIHAAGI---IHRDLKPGNLAVNEDCELKILDFGLARQA--DSEMXGXV 186
Query: 278 GTYGYIDPAYI-STNKFTMKSDIFSFGVIIFELITA 312
T Y P I + ++T DI+S G I+ E+IT
Sbjct: 187 VTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITG 222
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 92/201 (45%), Gaps = 16/201 (7%)
Query: 123 NILGQGAFGPVYKA-TMPSGGVAAIKVLA----SDSHQG-EKEFQTEVSLLGRLHHRNLV 176
+ LG+G F VYKA + + AIK + S++ G + E+ LL L H N++
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 75
Query: 177 NLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVP 236
L+ K L+++FM L +I VL L G+EYLH+ +
Sbjct: 76 GLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWI- 133
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKG---TYGYIDPAYI-STNK 292
+HRDLK N+LLD K+ADFGL+K F N T Y P +
Sbjct: 134 --LHRDLKPNNLLLDENGVLKLADFGLAKS--FGSPNRAYXHQVVTRWYRAPELLFGARM 189
Query: 293 FTMKSDIFSFGVIIFELITAI 313
+ + D+++ G I+ EL+ +
Sbjct: 190 YGVGVDMWAVGCILAELLLRV 210
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 145/325 (44%), Gaps = 47/325 (14%)
Query: 97 FTSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQG 156
T++ S SG+P + I + T +G+G FG V++ G A+K+ +S +
Sbjct: 23 MTTSGSGSGLPLLVQRTIAR-TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSS---RE 77
Query: 157 EKEF--QTEVSLLGRLHHRNLVNLIGY-CVDKGKY---MLIYEFMSNGSLSNLIYSEERV 210
E+ + + E+ L H N++ I D G + L+ ++ +GSL + Y
Sbjct: 78 ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFD--YLNRYT 135
Query: 211 LNWEERLQIALDISHGIEYLHEGAV-----PPVIHRDLKSANILLDHFMRAKVADFGL-- 263
+ E +++AL + G+ +LH V P + HRDLKS NIL+ +AD GL
Sbjct: 136 VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 195
Query: 264 ---SKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMK-------SDIFSFGVIIFEL---- 309
S + D + GT Y+ P + + MK +DI++ G++ +E+
Sbjct: 196 RHDSATDTIDIAPNHRVGTKRYMAPEVLD-DSINMKHFESFKRADIYAMGLVFWEIARRC 254
Query: 310 -ITAIHPHQNLMEYVNLASMSQDGVDE----ILDKQLVGAC-----NIQEVRELARIGHK 359
I IH L Y +L S V+E + +++L + + +R +A+I +
Sbjct: 255 SIGGIHEDYQL-PYYDLVP-SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRE 312
Query: 360 CLHKTPRKRPSIGEVTQALLKIKQR 384
C + R + + + L ++ Q+
Sbjct: 313 CWYANGAARLTALRIKKTLSQLSQQ 337
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 102/226 (45%), Gaps = 27/226 (11%)
Query: 125 LGQGAFGPVYKATMPSGG--VAAIKVLASDSHQG-EKEFQTEVSLLGRLHHRNLVNLIGY 181
+GQG FG V+KA G VA KVL + +G E+ +L L H N+VNLI
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 182 CVDK--------GKYMLIYEFMSN---GSLSNLIYSEERVLNWEERLQIALDISHGIEYL 230
C K G L+++F + G LSN++ E ++ + +G+ Y+
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK----FTLSEIKRVMQMLLNGLYYI 140
Query: 231 HEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDP 285
H + +HRD+K+AN+L+ K+ADFGL++ + R T Y P
Sbjct: 141 HRNKI---LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 197
Query: 286 AYISTNK-FTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQ 330
+ + + D++ G I+ E+ T Q E LA +SQ
Sbjct: 198 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ 243
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 100/244 (40%), Gaps = 13/244 (5%)
Query: 170 LHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEY 229
L H N+V + ++ E+ S G L I + R E R IS G+ Y
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-GVSY 130
Query: 230 LHEGAVPPVIHRDLKSANILLD--HFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAY 287
H V HRDLK N LLD R K+ DFG SK V + GT YI P
Sbjct: 131 CHAMQV---CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV 187
Query: 288 ISTNKFTMK-SDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACN 346
+ ++ K +D++S GV ++ ++ +P ++ E N + + IL+ Q
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNF----RKTIHRILNVQYAIPDY 243
Query: 347 IQEVRELARIGHKCLHKTPRKRPSIGEVT--QALLKIKQRHLAKQDTMSFADGEFSRAVS 404
+ E + + P KR SI E+ + LK L +TM+ E +
Sbjct: 244 VHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFDESDQPGQ 303
Query: 405 RIED 408
IE+
Sbjct: 304 SIEE 307
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 128/276 (46%), Gaps = 28/276 (10%)
Query: 120 NFTNILGQGAFGPVYKATMPSGGVAAIKVLASD--SHQGEKEFQTEVSLLGRLHHRNLVN 177
NF L + G ++K G +KVL S + ++F E L H N++
Sbjct: 13 NFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLP 71
Query: 178 LIGYCVDKGKY--MLIYEFMSNGSLSNLIYSEER-VLNWEERLQIALDISHGIEYLHEGA 234
++G C LI +M GSL N+++ V++ + ++ ALD++ G+ +LH
Sbjct: 72 VLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH--T 129
Query: 235 VPPVIHRD-LKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYI----- 288
+ P+I R L S ++++D M A+++ + F ++ G ++ P +
Sbjct: 130 LEPLIPRHALNSRSVMIDEDMTARISMADVK----FSFQSPGRMYAPAWVAPEALQKKPE 185
Query: 289 STNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQ 348
TN+ + +D++SF V+++EL+T P +L ++ +G+ + +
Sbjct: 186 DTNRRS--ADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGIS-----P 238
Query: 349 EVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQR 384
V +L +I C+++ P KRP + L K++ +
Sbjct: 239 HVSKLMKI---CMNEDPAKRPKFDMIVPILEKMQDK 271
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 107/237 (45%), Gaps = 29/237 (12%)
Query: 95 DRFTSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSH 154
D ++ S SG+P + + + +G+G +G V++ + G A+K+ +S
Sbjct: 16 DHSCTSGSGSGLPFLVQRTVARQI-TLLECVGKGRYGEVWRGSW-QGENVAVKIFSS--- 70
Query: 155 QGEKEFQTEVSLLGR--LHHRNLVNLIGYCV----DKGKYMLIYEFMSNGSLSNLIYSEE 208
+ EK + E L L H N++ I + + LI + GSL + Y +
Sbjct: 71 RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYD--YLQL 128
Query: 209 RVLNWEERLQIALDISHGIEYLH-----EGAVPPVIHRDLKSANILLDHFMRAKVADFGL 263
L+ L+I L I+ G+ +LH P + HRDLKS NIL+ + +AD GL
Sbjct: 129 TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL 188
Query: 264 S-----KEEVFDGRNSGLKGTYGYIDPAY----ISTNKFT--MKSDIFSFGVIIFEL 309
+ D N+ GT Y+ P I + F + DI++FG++++E+
Sbjct: 189 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 136/319 (42%), Gaps = 38/319 (11%)
Query: 116 KATQNFTNI-------LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEK---EFQTEVS 165
++ +NF N LG+G F V + S G +G+ E E++
Sbjct: 21 QSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIA 80
Query: 166 LLGRLHH-RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSE-ERVLNWEERLQIALDI 223
+L ++NL + + +LI E+ + G + +L E +++ + +++ I
Sbjct: 81 VLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQI 140
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFM---RAKVADFGLSKEEVFDGRNSGLKGTY 280
G+ YLH+ + +H DLK NILL K+ DFG+S++ + GT
Sbjct: 141 LEGVYYLHQNNI---VHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTP 197
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHP---HQNLMEYVNLASMSQDGVDEIL 337
Y+ P ++ + T +D+++ G+I + L+T P N Y+N++ ++ D +E
Sbjct: 198 EYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETF 257
Query: 338 DKQLVGACNIQEVRELAR-IGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTMSFAD 396
V +LA L K P KRP+ A + + L + D +
Sbjct: 258 SS----------VSQLATDFIQSLLVKNPEKRPT------AEICLSHSWLQQWDFENLFH 301
Query: 397 GEFSRAVSRIEDQQVELSK 415
E + + S+ +D V S+
Sbjct: 302 PEETSSSSQTQDHSVRSSE 320
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 16/207 (7%)
Query: 117 ATQNFTNI--LGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEFQT--EVSLLGRLH 171
AT + + +G GA+G VYKA P SG A+K + + + T EV+LL RL
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 172 ---HRNLVNLIGYCVDKG-----KYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDI 223
H N+V L+ C K L++E + + L + L E +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYI 283
G+++LH + +HRDLK NIL+ K+ADFGL++ + + T Y
Sbjct: 122 LRGLDFLHANCI---VHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYR 178
Query: 284 DPAYISTNKFTMKSDIFSFGVIIFELI 310
P + + + D++S G I E+
Sbjct: 179 APEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 10/197 (5%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQT--EVSLLGRLHHRNLVNLIGYC 182
+G+G +G VYKA G A+K + + T E+S+L L H N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRD 242
K + +L++E + L L+ E L L + +GI Y H+ V +HRD
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV---LHRD 125
Query: 243 LKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDP-AYISTNKFTMKSDIF 300
LK N+L++ K+ADFGL++ R + T Y P + + K++ DI+
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 301 SFGVIIFELI--TAIHP 315
S G I E++ T + P
Sbjct: 186 SVGCIFAEMVNGTPLFP 202
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 89/192 (46%), Gaps = 8/192 (4%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQT--EVSLLGRLHHRNLVNLIGYC 182
+G+G +G VYKA G A+K + + T E+S+L L H N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRD 242
K + +L++E + L L+ E L L + +GI Y H+ V +HRD
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV---LHRD 125
Query: 243 LKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDP-AYISTNKFTMKSDIF 300
LK N+L++ K+ADFGL++ R + T Y P + + K++ DI+
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 301 SFGVIIFELITA 312
S G I E++
Sbjct: 186 SVGCIFAEMVNG 197
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 95/229 (41%), Gaps = 13/229 (5%)
Query: 170 LHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEY 229
L H N+V + ++ E+ S G L I + R E R IS G+ Y
Sbjct: 71 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-GVSY 129
Query: 230 LHEGAVPPVIHRDLKSANILLD--HFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAY 287
H V HRDLK N LLD R K+ DFG SK V + GT YI P
Sbjct: 130 CHAMQV---CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEV 186
Query: 288 ISTNKFTMK-SDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACN 346
+ ++ K +D++S GV ++ ++ +P ++ E N + + IL+ Q
Sbjct: 187 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNF----RKTIHRILNVQYAIPDY 242
Query: 347 IQEVRELARIGHKCLHKTPRKRPSIGEVT--QALLKIKQRHLAKQDTMS 393
+ E + + P KR SI E+ + LK L +TM+
Sbjct: 243 VHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMT 291
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 10/197 (5%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQT--EVSLLGRLHHRNLVNLIGYC 182
+G+G +G VYKA G A+K + + T E+S+L L H N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRD 242
K + +L++E + L L+ E L L + +GI Y H+ V +HRD
Sbjct: 70 HTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV---LHRD 125
Query: 243 LKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDP-AYISTNKFTMKSDIF 300
LK N+L++ K+ADFGL++ R + T Y P + + K++ DI+
Sbjct: 126 LKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 301 SFGVIIFELI--TAIHP 315
S G I E++ T + P
Sbjct: 186 SVGCIFAEMVNGTPLFP 202
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 36/252 (14%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLA------SDSHQGEKEFQTEVSLLGRLHHRNLVN 177
LG+G+FG V AT + A+K ++ SD H + E+S L L H +++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHM---RVEREISYLKLLRHPHIIK 73
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
L +++ E+ + G L + I ++R+ E R + I IEY H +
Sbjct: 74 LYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGR-RFFQQIICAIEYCHRHKI-- 129
Query: 238 VIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK---GTYGYIDPAYISTNKFT 294
+HRDLK N+LLD + K+ADFGLS + DG + LK G+ Y P I+ +
Sbjct: 130 -VHRDLKPENLLLDDNLNVKIADFGLSN-IMTDG--NFLKTSCGSPNYAAPEVINGKLYA 185
Query: 295 -MKSDIFSFGVIIFELITAIHPHQ-----NLMEYVN-----LASMSQDGVDEILDKQLVG 343
+ D++S G++++ ++ P NL + VN + G ++ + +V
Sbjct: 186 GPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVA 245
Query: 344 ----ACNIQEVR 351
IQE+R
Sbjct: 246 DPMQRITIQEIR 257
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 117/238 (49%), Gaps = 25/238 (10%)
Query: 121 FTNI--LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLV 176
+TN+ +G+GA+G V A V AIK ++ HQ + E+ +L R H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 177 NL----IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+ +++ K + I + + L L+ ++ L+ + I G++Y+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHS 142
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY----GYIDPAYI 288
V +HRDLK +N+LL+ K+ DFGL++ D ++G Y Y P +
Sbjct: 143 ANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 289 STNK-FTMKSDIFSFGVIIFELIT--AIHPHQNLMEYVN-----LASMSQDGVDEILD 338
+K +T DI+S G I+ E+++ I P ++ ++ +N L S SQ+ ++ I++
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIIN 257
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 19/210 (9%)
Query: 117 ATQNFTNI--LGQGAFGPVYKATMPSGG----VAAIKVLASDSHQGEKEFQT--EVSLLG 168
AT + + +G GA+G VYKA P G + +++V G T EV+LL
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 169 RLH---HRNLVNLIGYCVDKG-----KYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIA 220
RL H N+V L+ C K L++E + + L + L E +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 126
Query: 221 LDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
G+++LH + +HRDLK NIL+ K+ADFGL++ + + + T
Sbjct: 127 RQFLRGLDFLHANCI---VHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTL 183
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELI 310
Y P + + + D++S G I E+
Sbjct: 184 WYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 119/255 (46%), Gaps = 11/255 (4%)
Query: 120 NFTNILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEF---QTEVSLLGRL-HHRN 174
+ ++G+G++ V + + + A+KV+ + +++ QTE + + +H
Sbjct: 23 DLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPF 82
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
LV L + + + E+++ G L + + ++ R A +IS + YLHE
Sbjct: 83 LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYLHERG 141
Query: 235 VPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG-RNSGLKGTYGYIDPAYISTNKF 293
+ I+RDLK N+LLD K+ D+G+ KE + G S GT YI P + +
Sbjct: 142 I---IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDY 198
Query: 294 TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVREL 353
D ++ GV++FE++ P + N ++D + +++ ++ + V+
Sbjct: 199 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSMSVKA- 257
Query: 354 ARIGHKCLHKTPRKR 368
A + L+K P++R
Sbjct: 258 ASVLKSFLNKDPKER 272
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 86/195 (44%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
+G G+FG V M +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+M G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D KVADFG +K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLLIDQQGYIKVADFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 86/195 (44%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
+G G+FG V M +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+M G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D KVADFG +K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLLIDQQGYIKVADFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 101/226 (44%), Gaps = 27/226 (11%)
Query: 125 LGQGAFGPVYKATMPSGG--VAAIKVLASDSHQG-EKEFQTEVSLLGRLHHRNLVNLIGY 181
+GQG FG V+KA G VA KVL + +G E+ +L L H N+VNLI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 182 CVDKGK--------YMLIYEFMSN---GSLSNLIYSEERVLNWEERLQIALDISHGIEYL 230
C K L+++F + G LSN++ E ++ + +G+ Y+
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK----FTLSEIKRVMQMLLNGLYYI 141
Query: 231 HEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDP 285
H + +HRD+K+AN+L+ K+ADFGL++ + R T Y P
Sbjct: 142 HRNKI---LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 286 AYISTNK-FTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQ 330
+ + + D++ G I+ E+ T Q E LA +SQ
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ 244
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 17/209 (8%)
Query: 116 KATQNFTNI--LGQGAFGPVYKA-TMPSGG--VAAIKVLASDSHQGEK-EFQTEVSLLGR 169
+A Q + + +G+GA+G V+KA + +GG VA +V +G EV++L
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 170 LH---HRNLVNLIGYCV-----DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L H N+V L C + K L++E + + L E + E +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 222 DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYG 281
+ G+++LH V +HRDLK NIL+ + K+ADFGL++ F + + T
Sbjct: 128 QLLRGLDFLHSHRV---VHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLW 184
Query: 282 YIDPAYISTNKFTMKSDIFSFGVIIFELI 310
Y P + + + D++S G I E+
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 127/268 (47%), Gaps = 35/268 (13%)
Query: 121 FTNI--LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLV 176
+TN+ +G+GA+G V A V AIK ++ HQ + E+ +L R H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 177 NL----IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+ +++ K + I + + L L+ ++ L+ + I G++Y+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHS 142
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY----GYIDPAYI 288
V +HRDLK +N+LL+ K+ DFGL++ D ++G Y Y P +
Sbjct: 143 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 289 STNK-FTMKSDIFSFGVIIFELIT--AIHPHQNLMEYVN-----LASMSQDGVDEILDKQ 340
+K +T DI+S G I+ E+++ I P ++ ++ +N L S SQ+ ++ I+
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII--- 256
Query: 341 LVGACNIQEVRELARIGHKCLHKTPRKR 368
N++ L + HK +K P R
Sbjct: 257 -----NLKARNYLLSLPHK--NKVPWNR 277
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 17/209 (8%)
Query: 116 KATQNFTNI--LGQGAFGPVYKA-TMPSGG--VAAIKVLASDSHQGEK-EFQTEVSLLGR 169
+A Q + + +G+GA+G V+KA + +GG VA +V +G EV++L
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 170 LH---HRNLVNLIGYCV-----DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L H N+V L C + K L++E + + L E + E +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 222 DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYG 281
+ G+++LH V +HRDLK NIL+ + K+ADFGL++ F + + T
Sbjct: 128 QLLRGLDFLHSHRV---VHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLW 184
Query: 282 YIDPAYISTNKFTMKSDIFSFGVIIFELI 310
Y P + + + D++S G I E+
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 89/187 (47%), Gaps = 25/187 (13%)
Query: 145 AIKVLASDSHQGEK---EFQTEVSLLGRLHHRNLVNLIGYCVDKGKY--------MLIYE 193
A+KVL +D + F+ E L+H +V + D G+ ++ E
Sbjct: 41 AVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY----DTGEAETPAGPLPYIVME 96
Query: 194 FMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHF 253
++ +L +++++E + + +++ D + + H+ + IHRD+K ANIL+
Sbjct: 97 YVDGVTLRDIVHTEGP-MTPKRAIEVIADACQALNFSHQNGI---IHRDVKPANILISAT 152
Query: 254 MRAKVADFGLSKEEVFDGRNS-----GLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFE 308
KV DFG+++ + D NS + GT Y+ P + +SD++S G +++E
Sbjct: 153 NAVKVVDFGIAR-AIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 211
Query: 309 LITAIHP 315
++T P
Sbjct: 212 VLTGEPP 218
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 117/238 (49%), Gaps = 25/238 (10%)
Query: 121 FTNI--LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLV 176
+TN+ +G+GA+G V A V AIK ++ HQ + E+ +L R H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 177 NL----IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+ +++ K + I + + L L+ ++ L+ + I G++Y+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHS 142
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY----GYIDPAYI 288
V +HRDLK +N+LL+ K+ DFGL++ D ++G Y Y P +
Sbjct: 143 ANV---LHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 289 STNK-FTMKSDIFSFGVIIFELIT--AIHPHQNLMEYVN-----LASMSQDGVDEILD 338
+K +T DI+S G I+ E+++ I P ++ ++ +N L S SQ+ ++ I++
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIIN 257
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 127/268 (47%), Gaps = 35/268 (13%)
Query: 121 FTNI--LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLV 176
+TN+ +G+GA+G V A V AIK ++ HQ + E+ +L R H N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 177 NL----IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+ +++ K + I + + L L+ ++ L+ + I G++Y+H
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHS 144
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY----GYIDPAYI 288
V +HRDLK +N+LL+ K+ DFGL++ D ++G Y Y P +
Sbjct: 145 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 289 STNK-FTMKSDIFSFGVIIFELIT--AIHPHQNLMEYVN-----LASMSQDGVDEILDKQ 340
+K +T DI+S G I+ E+++ I P ++ ++ +N L S SQ+ ++ I+
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII--- 258
Query: 341 LVGACNIQEVRELARIGHKCLHKTPRKR 368
N++ L + HK +K P R
Sbjct: 259 -----NLKARNYLLSLPHK--NKVPWNR 279
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 17/209 (8%)
Query: 116 KATQNFTNI--LGQGAFGPVYKA-TMPSGG--VAAIKVLASDSHQGEK-EFQTEVSLLGR 169
+A Q + + +G+GA+G V+KA + +GG VA +V +G EV++L
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 170 LH---HRNLVNLIGYCV-----DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L H N+V L C + K L++E + + L E + E +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 222 DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYG 281
+ G+++LH V +HRDLK NIL+ + K+ADFGL++ F + + T
Sbjct: 128 QLLRGLDFLHSHRV---VHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLW 184
Query: 282 YIDPAYISTNKFTMKSDIFSFGVIIFELI 310
Y P + + + D++S G I E+
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 121/256 (47%), Gaps = 13/256 (5%)
Query: 120 NFTNILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEF---QTEVSLLGRL-HHRN 174
+ ++G+G++ V + + + A+KV+ + +++ QTE + + +H
Sbjct: 12 DLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPF 71
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
LV L + + + E+++ G L + + ++ R A +IS + YLHE
Sbjct: 72 LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYLHERG 130
Query: 235 VPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG-RNSGLKGTYGYIDPAYISTNKF 293
+ I+RDLK N+LLD K+ D+G+ KE + G S GT YI P + +
Sbjct: 131 I---IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDY 187
Query: 294 TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDE-ILDKQLVGACNIQEVRE 352
D ++ GV++FE++ P + N ++D + + IL+KQ+ ++ +
Sbjct: 188 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLS--VK 245
Query: 353 LARIGHKCLHKTPRKR 368
A + L+K P++R
Sbjct: 246 AASVLKSFLNKDPKER 261
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 127/268 (47%), Gaps = 35/268 (13%)
Query: 121 FTNI--LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLV 176
+TN+ +G+GA+G V A V AIK ++ HQ + E+ +L R H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 177 NL----IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+ +++ K + I + + L L+ ++ L+ + I G++Y+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHS 142
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY----GYIDPAYI 288
V +HRDLK +N+LL+ K+ DFGL++ D ++G Y Y P +
Sbjct: 143 ANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 289 STNK-FTMKSDIFSFGVIIFELIT--AIHPHQNLMEYVN-----LASMSQDGVDEILDKQ 340
+K +T DI+S G I+ E+++ I P ++ ++ +N L S SQ+ ++ I+
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII--- 256
Query: 341 LVGACNIQEVRELARIGHKCLHKTPRKR 368
N++ L + HK +K P R
Sbjct: 257 -----NLKARNYLLSLPHK--NKVPWNR 277
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 117/238 (49%), Gaps = 25/238 (10%)
Query: 121 FTNI--LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLV 176
+TN+ +G+GA+G V A V AIK ++ HQ + E+ +L R H N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 177 NL----IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+ +++ K + I + + L L+ ++ L+ + I G++Y+H
Sbjct: 105 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHS 162
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY----GYIDPAYI 288
V +HRDLK +N+LL+ K+ DFGL++ D ++G Y Y P +
Sbjct: 163 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 289 STNK-FTMKSDIFSFGVIIFELIT--AIHPHQNLMEYVN-----LASMSQDGVDEILD 338
+K +T DI+S G I+ E+++ I P ++ ++ +N L S SQ+ ++ I++
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 277
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 121/256 (47%), Gaps = 13/256 (5%)
Query: 120 NFTNILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEF---QTEVSLLGRL-HHRN 174
+ ++G+G++ V + + + A+KV+ + +++ QTE + + +H
Sbjct: 8 DLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPF 67
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
LV L + + + E+++ G L + + ++ R A +IS + YLHE
Sbjct: 68 LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYLHERG 126
Query: 235 VPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG-RNSGLKGTYGYIDPAYISTNKF 293
+ I+RDLK N+LLD K+ D+G+ KE + G S GT YI P + +
Sbjct: 127 I---IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDY 183
Query: 294 TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDE-ILDKQLVGACNIQEVRE 352
D ++ GV++FE++ P + N ++D + + IL+KQ+ ++ +
Sbjct: 184 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLS--VK 241
Query: 353 LARIGHKCLHKTPRKR 368
A + L+K P++R
Sbjct: 242 AASVLKSFLNKDPKER 257
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 127/268 (47%), Gaps = 35/268 (13%)
Query: 121 FTNI--LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLV 176
+TN+ +G+GA+G V A V AIK ++ HQ + E+ +L R H N++
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 177 NL----IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+ +++ K + I + + L L+ ++ L+ + I G++Y+H
Sbjct: 93 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHS 150
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY----GYIDPAYI 288
V +HRDLK +N+LL+ K+ DFGL++ D ++G Y Y P +
Sbjct: 151 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 207
Query: 289 STNK-FTMKSDIFSFGVIIFELIT--AIHPHQNLMEYVN-----LASMSQDGVDEILDKQ 340
+K +T DI+S G I+ E+++ I P ++ ++ +N L S SQ+ ++ I+
Sbjct: 208 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII--- 264
Query: 341 LVGACNIQEVRELARIGHKCLHKTPRKR 368
N++ L + HK +K P R
Sbjct: 265 -----NLKARNYLLSLPHK--NKVPWNR 285
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 127/268 (47%), Gaps = 35/268 (13%)
Query: 121 FTNI--LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLV 176
+TN+ +G+GA+G V A V AIK ++ HQ + E+ +L R H N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 177 NL----IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+ +++ K + I + + L L+ ++ L+ + I G++Y+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHS 142
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY----GYIDPAYI 288
V +HRDLK +N+LL+ K+ DFGL++ D ++G Y Y P +
Sbjct: 143 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 289 STNK-FTMKSDIFSFGVIIFELIT--AIHPHQNLMEYVN-----LASMSQDGVDEILDKQ 340
+K +T DI+S G I+ E+++ I P ++ ++ +N L S SQ+ ++ I+
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII--- 256
Query: 341 LVGACNIQEVRELARIGHKCLHKTPRKR 368
N++ L + HK +K P R
Sbjct: 257 -----NLKARNYLLSLPHK--NKVPWNR 277
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 108/223 (48%), Gaps = 25/223 (11%)
Query: 111 YKDIQKATQNFTNILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGR 169
++D+ K T + +LG+GA+ V A ++ +G A+K++ + EV L +
Sbjct: 10 FEDMYKLT---SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQ 66
Query: 170 LH-HRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIE 228
++N++ LI + D ++ L++E + GS+ I +++ N E ++ D++ ++
Sbjct: 67 CQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHI-QKQKHFNEREASRVVRDVAAALD 125
Query: 229 YLHEGAVPPVIHRDLKSANILLDHFMR---AKVADFGLSKEEVFDGRNSGLK-------- 277
+LH + HRDLK NIL + + K+ DF L + + +
Sbjct: 126 FLHTKG---IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPC 182
Query: 278 GTYGYIDPAYIS--TNKFTM---KSDIFSFGVIIFELITAIHP 315
G+ Y+ P + T++ T + D++S GV+++ +++ P
Sbjct: 183 GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 127/268 (47%), Gaps = 35/268 (13%)
Query: 121 FTNI--LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLV 176
+TN+ +G+GA+G V A V AIK ++ HQ + E+ +L R H N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 177 NL----IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+ +++ K + I + + L L+ ++ L+ + I G++Y+H
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHS 140
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY----GYIDPAYI 288
V +HRDLK +N+LL+ K+ DFGL++ D ++G Y Y P +
Sbjct: 141 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 289 STNK-FTMKSDIFSFGVIIFELIT--AIHPHQNLMEYVN-----LASMSQDGVDEILDKQ 340
+K +T DI+S G I+ E+++ I P ++ ++ +N L S SQ+ ++ I+
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII--- 254
Query: 341 LVGACNIQEVRELARIGHKCLHKTPRKR 368
N++ L + HK +K P R
Sbjct: 255 -----NLKARNYLLSLPHK--NKVPWNR 275
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 117/238 (49%), Gaps = 25/238 (10%)
Query: 121 FTNI--LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQG-EKEFQTEVSLLGRLHHRNLV 176
+TN+ +G+GA+G V A V AIK ++ HQ + E+ +L R H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 177 NL----IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+ +++ K + I + + L L+ ++ L+ + I G++Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHS 146
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY----GYIDPAYI 288
V +HRDLK +N+LL+ K+ DFGL++ D ++G Y Y P +
Sbjct: 147 ANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 289 STNK-FTMKSDIFSFGVIIFELIT--AIHPHQNLMEYVN-----LASMSQDGVDEILD 338
+K +T DI+S G I+ E+++ I P ++ ++ +N L S SQ+ ++ I++
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 127/268 (47%), Gaps = 35/268 (13%)
Query: 121 FTNI--LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLV 176
+TN+ +G+GA+G V A V AIK ++ HQ + E+ +L R H N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 177 NL----IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+ +++ K + I + + L L+ ++ L+ + I G++Y+H
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHS 147
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY----GYIDPAYI 288
V +HRDLK +N+LL+ K+ DFGL++ D ++G Y Y P +
Sbjct: 148 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 204
Query: 289 STNK-FTMKSDIFSFGVIIFELIT--AIHPHQNLMEYVN-----LASMSQDGVDEILDKQ 340
+K +T DI+S G I+ E+++ I P ++ ++ +N L S SQ+ ++ I+
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII--- 261
Query: 341 LVGACNIQEVRELARIGHKCLHKTPRKR 368
N++ L + HK +K P R
Sbjct: 262 -----NLKARNYLLSLPHK--NKVPWNR 282
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 89/185 (48%), Gaps = 21/185 (11%)
Query: 145 AIKVLASDSHQGEK---EFQTEVSLLGRLHHRNLVNLIGYCVDKGKY------MLIYEFM 195
A+KVL +D + F+ E L+H +V + Y + + ++ E++
Sbjct: 41 AVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV--YATGEAETPAGPLPYIVMEYV 98
Query: 196 SNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMR 255
+L +++++E + + +++ D + + H+ + IHRD+K ANI++
Sbjct: 99 DGVTLRDIVHTEGP-MTPKRAIEVIADACQALNFSHQNGI---IHRDVKPANIMISATNA 154
Query: 256 AKVADFGLSKEEVFDGRNS-----GLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELI 310
KV DFG+++ + D NS + GT Y+ P + +SD++S G +++E++
Sbjct: 155 VKVMDFGIAR-AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVL 213
Query: 311 TAIHP 315
T P
Sbjct: 214 TGEPP 218
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 127/268 (47%), Gaps = 35/268 (13%)
Query: 121 FTNI--LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLV 176
+TN+ +G+GA+G V A V AIK ++ HQ + E+ +L R H N++
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 177 NL----IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+ +++ K + I + + L L+ ++ L+ + I G++Y+H
Sbjct: 91 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHS 148
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY----GYIDPAYI 288
V +HRDLK +N+LL+ K+ DFGL++ D ++G Y Y P +
Sbjct: 149 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 205
Query: 289 STNK-FTMKSDIFSFGVIIFELIT--AIHPHQNLMEYVN-----LASMSQDGVDEILDKQ 340
+K +T DI+S G I+ E+++ I P ++ ++ +N L S SQ+ ++ I+
Sbjct: 206 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII--- 262
Query: 341 LVGACNIQEVRELARIGHKCLHKTPRKR 368
N++ L + HK +K P R
Sbjct: 263 -----NLKARNYLLSLPHK--NKVPWNR 283
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 127/268 (47%), Gaps = 35/268 (13%)
Query: 121 FTNI--LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLV 176
+TN+ +G+GA+G V A V AIK ++ HQ + E+ +L R H N++
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 177 NL----IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+ +++ K + I + + L L+ ++ L+ + I G++Y+H
Sbjct: 82 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHS 139
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY----GYIDPAYI 288
V +HRDLK +N+LL+ K+ DFGL++ D ++G Y Y P +
Sbjct: 140 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 196
Query: 289 STNK-FTMKSDIFSFGVIIFELIT--AIHPHQNLMEYVN-----LASMSQDGVDEILDKQ 340
+K +T DI+S G I+ E+++ I P ++ ++ +N L S SQ+ ++ I+
Sbjct: 197 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII--- 253
Query: 341 LVGACNIQEVRELARIGHKCLHKTPRKR 368
N++ L + HK +K P R
Sbjct: 254 -----NLKARNYLLSLPHK--NKVPWNR 274
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 127/268 (47%), Gaps = 35/268 (13%)
Query: 121 FTNI--LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLV 176
+TN+ +G+GA+G V A V AIK ++ HQ + E+ +L R H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 177 NL----IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+ +++ K + I + + L L+ ++ L+ + I G++Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHS 146
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY----GYIDPAYI 288
V +HRDLK +N+LL+ K+ DFGL++ D ++G Y Y P +
Sbjct: 147 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 289 STNK-FTMKSDIFSFGVIIFELIT--AIHPHQNLMEYVN-----LASMSQDGVDEILDKQ 340
+K +T DI+S G I+ E+++ I P ++ ++ +N L S SQ+ ++ I+
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII--- 260
Query: 341 LVGACNIQEVRELARIGHKCLHKTPRKR 368
N++ L + HK +K P R
Sbjct: 261 -----NLKARNYLLSLPHK--NKVPWNR 281
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 127/268 (47%), Gaps = 35/268 (13%)
Query: 121 FTNI--LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLV 176
+TN+ +G+GA+G V A V AIK ++ HQ + E+ +L R H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 177 NL----IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+ +++ K + I + + L L+ ++ L+ + I G++Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHS 146
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY----GYIDPAYI 288
V +HRDLK +N+LL+ K+ DFGL++ D ++G Y Y P +
Sbjct: 147 ANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 289 STNK-FTMKSDIFSFGVIIFELIT--AIHPHQNLMEYVN-----LASMSQDGVDEILDKQ 340
+K +T DI+S G I+ E+++ I P ++ ++ +N L S SQ+ ++ I+
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII--- 260
Query: 341 LVGACNIQEVRELARIGHKCLHKTPRKR 368
N++ L + HK +K P R
Sbjct: 261 -----NLKARNYLLSLPHK--NKVPWNR 281
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 127/268 (47%), Gaps = 35/268 (13%)
Query: 121 FTNI--LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLV 176
+TN+ +G+GA+G V A V AIK ++ HQ + E+ +L R H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 177 NL----IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+ +++ K + I + + L L+ ++ L+ + I G++Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHS 146
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGL----KGTYGYIDPAYI 288
V +HRDLK +N+LL+ K+ DFGL++ D ++G T Y P +
Sbjct: 147 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 203
Query: 289 STNK-FTMKSDIFSFGVIIFELIT--AIHPHQNLMEYVN-----LASMSQDGVDEILDKQ 340
+K +T DI+S G I+ E+++ I P ++ ++ +N L S SQ+ ++ I+
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII--- 260
Query: 341 LVGACNIQEVRELARIGHKCLHKTPRKR 368
N++ L + HK +K P R
Sbjct: 261 -----NLKARNYLLSLPHK--NKVPWNR 281
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 127/268 (47%), Gaps = 35/268 (13%)
Query: 121 FTNI--LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLV 176
+TN+ +G+GA+G V A V AIK ++ HQ + E+ +L R H N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 177 NL----IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+ +++ K + I + + L L+ ++ L+ + I G++Y+H
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHS 147
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGL----KGTYGYIDPAYI 288
V +HRDLK +N+LL+ K+ DFGL++ D ++G T Y P +
Sbjct: 148 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 204
Query: 289 STNK-FTMKSDIFSFGVIIFELIT--AIHPHQNLMEYVN-----LASMSQDGVDEILDKQ 340
+K +T DI+S G I+ E+++ I P ++ ++ +N L S SQ+ ++ I+
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII--- 261
Query: 341 LVGACNIQEVRELARIGHKCLHKTPRKR 368
N++ L + HK +K P R
Sbjct: 262 -----NLKARNYLLSLPHK--NKVPWNR 282
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 12/203 (5%)
Query: 117 ATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRL 170
+ +NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 62
Query: 171 HHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYL 230
+H N+V L+ + K L++EF+S + S + + G+ +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 231 HEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYIS 289
H V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 123 HSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 290 TNK-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 126/268 (47%), Gaps = 35/268 (13%)
Query: 121 FTNI--LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLV 176
+TN+ +G+GA+G V A V AIK ++ HQ + E+ +L R H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 177 NL----IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+ +++ K + I + + L L+ + L+ + I G++Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH--LSNDHICYFLYQILRGLKYIHS 146
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY----GYIDPAYI 288
V +HRDLK +N+LL+ K+ DFGL++ D ++G Y Y P +
Sbjct: 147 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 289 STNK-FTMKSDIFSFGVIIFELIT--AIHPHQNLMEYVN-----LASMSQDGVDEILDKQ 340
+K +T DI+S G I+ E+++ I P ++ ++ +N L S SQ+ ++ I+
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII--- 260
Query: 341 LVGACNIQEVRELARIGHKCLHKTPRKR 368
N++ L + HK +K P R
Sbjct: 261 -----NLKARNYLLSLPHK--NKVPWNR 281
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 10/150 (6%)
Query: 172 HRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLH 231
H +++ LI L+++ M G L + + +E+ L+ +E I + + +LH
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-TEKVALSEKETRSIMRSLLEAVSFLH 217
Query: 232 EGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTN 291
+ +HRDLK NILLD M+ +++DFG S + L GT GY+ P + +
Sbjct: 218 ANNI---VHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCS 274
Query: 292 K------FTMKSDIFSFGVIIFELITAIHP 315
+ + D+++ GVI+F L+ P
Sbjct: 275 MDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 121/256 (47%), Gaps = 13/256 (5%)
Query: 120 NFTNILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKEF---QTEVSLLGRL-HHRN 174
+ ++G+G++ V + + + A++V+ + +++ QTE + + +H
Sbjct: 55 DLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPF 114
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
LV L + + + E+++ G L + + ++ R A +IS + YLHE
Sbjct: 115 LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA-EISLALNYLHERG 173
Query: 235 VPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG-RNSGLKGTYGYIDPAYISTNKF 293
+ I+RDLK N+LLD K+ D+G+ KE + G S GT YI P + +
Sbjct: 174 I---IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDY 230
Query: 294 TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDE-ILDKQLVGACNIQEVRE 352
D ++ GV++FE++ P + N ++D + + IL+KQ+ ++ +
Sbjct: 231 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLS--VK 288
Query: 353 LARIGHKCLHKTPRKR 368
A + L+K P++R
Sbjct: 289 AASVLKSFLNKDPKER 304
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 116/238 (48%), Gaps = 25/238 (10%)
Query: 121 FTNI--LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLV 176
+TN+ +G+GA+G V A V AIK ++ HQ + E+ +L R H N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 177 NL----IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+ +++ K + + + L L+ ++ L+ + I G++Y+H
Sbjct: 105 GINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH--LSNDHICYFLYQILRGLKYIHS 162
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY----GYIDPAYI 288
V +HRDLK +N+LL+ K+ DFGL++ D ++G Y Y P +
Sbjct: 163 ANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 289 STNK-FTMKSDIFSFGVIIFELIT--AIHPHQNLMEYVN-----LASMSQDGVDEILD 338
+K +T DI+S G I+ E+++ I P ++ ++ +N L S SQ+ ++ I++
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 277
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 12/203 (5%)
Query: 117 ATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRL 170
+ +NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 62
Query: 171 HHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYL 230
+H N+V L+ + K L++EF+S + S + + G+ +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 231 HEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYIS 289
H V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 123 HSHRV---LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 290 TNK-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 12/203 (5%)
Query: 117 ATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRL 170
+ +NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 60
Query: 171 HHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYL 230
+H N+V L+ + K L++EF+S + S + + G+ +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 231 HEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYIS 289
H V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 121 HSHRV---LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 290 TNK-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 97/203 (47%), Gaps = 12/203 (5%)
Query: 117 ATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRL 170
+ +NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 61
Query: 171 HHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYL 230
+H N+V L+ + K L++EF+S + S + + G+ +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 231 HEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYIS 289
H V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 122 HSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 290 TNK-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 89/187 (47%), Gaps = 25/187 (13%)
Query: 145 AIKVLASDSHQGEK---EFQTEVSLLGRLHHRNLVNLIGYCVDKGKY--------MLIYE 193
A+KVL +D + F+ E L+H +V + D G+ ++ E
Sbjct: 41 AVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY----DTGEAETPAGPLPYIVME 96
Query: 194 FMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHF 253
++ +L +++++E + + +++ D + + H+ + IHRD+K ANI++
Sbjct: 97 YVDGVTLRDIVHTEGP-MTPKRAIEVIADACQALNFSHQNGI---IHRDVKPANIMISAT 152
Query: 254 MRAKVADFGLSKEEVFDGRNS-----GLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFE 308
KV DFG+++ + D NS + GT Y+ P + +SD++S G +++E
Sbjct: 153 NAVKVMDFGIAR-AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 211
Query: 309 LITAIHP 315
++T P
Sbjct: 212 VLTGEPP 218
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 89/187 (47%), Gaps = 25/187 (13%)
Query: 145 AIKVLASDSHQGEK---EFQTEVSLLGRLHHRNLVNLIGYCVDKGKY--------MLIYE 193
A+KVL +D + F+ E L+H +V + D G+ ++ E
Sbjct: 41 AVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY----DTGEAETPAGPLPYIVME 96
Query: 194 FMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHF 253
++ +L +++++E + + +++ D + + H+ + IHRD+K ANI++
Sbjct: 97 YVDGVTLRDIVHTEGP-MTPKRAIEVIADACQALNFSHQNGI---IHRDVKPANIMISAT 152
Query: 254 MRAKVADFGLSKEEVFDGRNS-----GLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFE 308
KV DFG+++ + D NS + GT Y+ P + +SD++S G +++E
Sbjct: 153 NAVKVMDFGIAR-AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 211
Query: 309 LITAIHP 315
++T P
Sbjct: 212 VLTGEPP 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 89/187 (47%), Gaps = 25/187 (13%)
Query: 145 AIKVLASDSHQGEK---EFQTEVSLLGRLHHRNLVNLIGYCVDKGKY--------MLIYE 193
A+KVL +D + F+ E L+H +V + D G+ ++ E
Sbjct: 41 AVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY----DTGEAETPAGPLPYIVME 96
Query: 194 FMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHF 253
++ +L +++++E + + +++ D + + H+ + IHRD+K ANI++
Sbjct: 97 YVDGVTLRDIVHTEGP-MTPKRAIEVIADACQALNFSHQNGI---IHRDVKPANIMISAT 152
Query: 254 MRAKVADFGLSKEEVFDGRNS-----GLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFE 308
KV DFG+++ + D NS + GT Y+ P + +SD++S G +++E
Sbjct: 153 NAVKVMDFGIAR-AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 211
Query: 309 LITAIHP 315
++T P
Sbjct: 212 VLTGEPP 218
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V M +G A+K+L KE + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+++D KV DFGL+K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLMIDQQGYIKVTDFGLAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 99/244 (40%), Gaps = 13/244 (5%)
Query: 170 LHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEY 229
L H N+V + ++ E+ S G L I + R E R IS G+ Y
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-GVSY 130
Query: 230 LHEGAVPPVIHRDLKSANILLD--HFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAY 287
H V HRDLK N LLD R K+ FG SK V + GT YI P
Sbjct: 131 CHAMQV---CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEV 187
Query: 288 ISTNKFTMK-SDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACN 346
+ ++ K +D++S GV ++ ++ +P ++ E N + + IL+ Q
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNF----RKTIHRILNVQYAIPDY 243
Query: 347 IQEVRELARIGHKCLHKTPRKRPSIGEVT--QALLKIKQRHLAKQDTMSFADGEFSRAVS 404
+ E + + P KR SI E+ + LK L +TM+ E +
Sbjct: 244 VHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFDESDQPGQ 303
Query: 405 RIED 408
IE+
Sbjct: 304 SIEE 307
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 127/268 (47%), Gaps = 35/268 (13%)
Query: 121 FTNI--LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLV 176
+TN+ +G+GA+G V A V AI+ ++ HQ + E+ +L R H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 177 NL----IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+ +++ K + I + + L L+ ++ L+ + I G++Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHS 146
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY----GYIDPAYI 288
V +HRDLK +N+LL+ K+ DFGL++ D ++G Y Y P +
Sbjct: 147 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 289 STNK-FTMKSDIFSFGVIIFELIT--AIHPHQNLMEYVN-----LASMSQDGVDEILDKQ 340
+K +T DI+S G I+ E+++ I P ++ ++ +N L S SQ+ ++ I+
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII--- 260
Query: 341 LVGACNIQEVRELARIGHKCLHKTPRKR 368
N++ L + HK +K P R
Sbjct: 261 -----NLKARNYLLSLPHK--NKVPWNR 281
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 39/217 (17%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLAS---DSHQGEKEFQTEVSLLGRLH-HRNLVNLI 179
LG+GA+G V+K+ +G V A+K + +S ++ F+ E+ +L L H N+VNL+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNLL 75
Query: 180 GYCV---DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVP 236
D+ Y L++++M L +I + +L + + + I+YLH G +
Sbjct: 76 NVLRADNDRDVY-LVFDYMET-DLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHSGGL- 130
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSKE-------------------EVFDGRNSGLK 277
+HRD+K +NILL+ KVADFGLS+ E FD L
Sbjct: 131 --LHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILT 188
Query: 278 ---GTYGYIDPA-YISTNKFTMKSDIFSFGVIIFELI 310
T Y P + + K+T D++S G I+ E++
Sbjct: 189 DYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEIL 225
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 7/168 (4%)
Query: 157 EKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEER 216
++ Q E+ L H N+V + +I E+ S G L I + R E R
Sbjct: 60 DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEAR 119
Query: 217 LQIALDISHGIEYLHEGAVPPVIHRDLKSANILLD--HFMRAKVADFGLSKEEVFDGRNS 274
+S G+ Y H + HRDLK N LLD R K+ DFG SK V +
Sbjct: 120 FFFQQLLS-GVSYCHSMQI---CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 175
Query: 275 GLKGTYGYIDPAYISTNKFTMK-SDIFSFGVIIFELITAIHPHQNLME 321
GT YI P + ++ K +D++S GV ++ ++ +P ++ E
Sbjct: 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEE 223
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 89/187 (47%), Gaps = 25/187 (13%)
Query: 145 AIKVLASDSHQGEK---EFQTEVSLLGRLHHRNLVNLIGYCVDKGKY--------MLIYE 193
A+KVL +D + F+ E L+H +V + D G+ ++ E
Sbjct: 58 AVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY----DTGEAETPAGPLPYIVME 113
Query: 194 FMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHF 253
++ +L +++++E + + +++ D + + H+ + IHRD+K ANI++
Sbjct: 114 YVDGVTLRDIVHTEGP-MTPKRAIEVIADACQALNFSHQNGI---IHRDVKPANIMISAT 169
Query: 254 MRAKVADFGLSKEEVFDGRNS-----GLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFE 308
KV DFG+++ + D NS + GT Y+ P + +SD++S G +++E
Sbjct: 170 NAVKVMDFGIAR-AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYE 228
Query: 309 LITAIHP 315
++T P
Sbjct: 229 VLTGEPP 235
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 12/203 (5%)
Query: 117 ATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRL 170
+ +NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 62
Query: 171 HHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYL 230
+H N+V L+ + K L++EF+ + + S + + G+ +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 231 HEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYIS 289
H V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 123 HSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 290 TNK-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 99/244 (40%), Gaps = 13/244 (5%)
Query: 170 LHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEY 229
L H N+V + ++ E+ S G L I + R E R IS G+ Y
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-GVSY 130
Query: 230 LHEGAVPPVIHRDLKSANILLD--HFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAY 287
H V HRDLK N LLD R K+ FG SK V + GT YI P
Sbjct: 131 CHAMQV---CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEV 187
Query: 288 ISTNKFTMK-SDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACN 346
+ ++ K +D++S GV ++ ++ +P ++ E N + + IL+ Q
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNF----RKTIHRILNVQYAIPDY 243
Query: 347 IQEVRELARIGHKCLHKTPRKRPSIGEVT--QALLKIKQRHLAKQDTMSFADGEFSRAVS 404
+ E + + P KR SI E+ + LK L +TM+ E +
Sbjct: 244 VHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPADLMNDNTMTTQFDESDQPGQ 303
Query: 405 RIED 408
IE+
Sbjct: 304 SIEE 307
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 86/195 (44%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
+G G+FG V M +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E++ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D KVADFG +K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLLIDQQGYIKVADFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 11/178 (6%)
Query: 161 QTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIA 220
+TE+ +L +L+H ++ + + D Y ++ E M G L + + +R+ +L
Sbjct: 62 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF- 119
Query: 221 LDISHGIEYLHEGAVPPVIHRDLKSANILL---DHFMRAKVADFGLSKEEVFDGRNSGLK 277
+ ++YLHE + IHRDLK N+LL + K+ DFG SK L
Sbjct: 120 YQMLLAVQYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 176
Query: 278 GTYGYIDPAY---ISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDG 332
GT Y+ P + T + D +S GVI+F ++ P V+L G
Sbjct: 177 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 234
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 11/178 (6%)
Query: 161 QTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIA 220
+TE+ +L +L+H ++ + + D Y ++ E M G L + + +R+ +L
Sbjct: 69 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF- 126
Query: 221 LDISHGIEYLHEGAVPPVIHRDLKSANILL---DHFMRAKVADFGLSKEEVFDGRNSGLK 277
+ ++YLHE + IHRDLK N+LL + K+ DFG SK L
Sbjct: 127 YQMLLAVQYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 183
Query: 278 GTYGYIDP---AYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDG 332
GT Y+ P + T + D +S GVI+F ++ P V+L G
Sbjct: 184 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 241
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 11/178 (6%)
Query: 161 QTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIA 220
+TE+ +L +L+H ++ + + D Y ++ E M G L + + +R+ +L
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF- 120
Query: 221 LDISHGIEYLHEGAVPPVIHRDLKSANILL---DHFMRAKVADFGLSKEEVFDGRNSGLK 277
+ ++YLHE + IHRDLK N+LL + K+ DFG SK L
Sbjct: 121 YQMLLAVQYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 177
Query: 278 GTYGYIDPAY---ISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDG 332
GT Y+ P + T + D +S GVI+F ++ P V+L G
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 235
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 120/290 (41%), Gaps = 48/290 (16%)
Query: 145 AIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYM-LIYEFMSNGSLSNL 203
A+K++ +E + LL H N++ L D GKY+ ++ E M G L +
Sbjct: 51 AVKIIDKSKRDPTEEIEI---LLRYGQHPNIITLKD-VYDDGKYVYVVTELMKGGELLDK 106
Query: 204 IYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILL----DHFMRAKVA 259
I ++ + E + I+ +EYLH V +HRDLK +NIL + ++
Sbjct: 107 IL-RQKFFSEREASAVLFTITKTVEYLHAQGV---VHRDLKPSNILYVDESGNPESIRIC 162
Query: 260 DFGLSKEEVFDGRNSGLKG---TYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPH 316
DFG +K+ N L T ++ P + + DI+S GV+++ ++T
Sbjct: 163 DFGFAKQ--LRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG---- 216
Query: 317 QNLMEYVNLASMSQDGVDEILDKQLVGACNI-----QEVRELAR-IGHKCLHKTPRKRPS 370
Y A+ D +EIL + G ++ V + A+ + K LH P +R
Sbjct: 217 -----YTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQR-- 269
Query: 371 IGEVTQALL----------KIKQRHLAKQDTMSFADGEFSRAVSRIEDQQ 410
+T AL+ ++ Q L +QD G + S + Q
Sbjct: 270 ---LTAALVLRHPWIVHWDQLPQYQLNRQDAPHLVKGAMAATYSALNRNQ 316
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 11/178 (6%)
Query: 161 QTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIA 220
+TE+ +L +L+H ++ + + D Y ++ E M G L + + +R+ +L
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF- 120
Query: 221 LDISHGIEYLHEGAVPPVIHRDLKSANILL---DHFMRAKVADFGLSKEEVFDGRNSGLK 277
+ ++YLHE + IHRDLK N+LL + K+ DFG SK L
Sbjct: 121 YQMLLAVQYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 177
Query: 278 GTYGYIDP---AYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDG 332
GT Y+ P + T + D +S GVI+F ++ P V+L G
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 235
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 32/212 (15%)
Query: 194 FMSNGSLSNLIYSE------ERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSAN 247
F+ SLS++ E + L E + + ++ G+E+L A IHRDL + N
Sbjct: 174 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 230
Query: 248 ILLDHFMRAKVADFGLSKEEVFDG---RNSGLKGTYGYIDPAYISTNKFTMKSDIFSFGV 304
ILL K+ DFGL+++ D R + ++ P I +T++SD++SFGV
Sbjct: 231 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 290
Query: 305 IIFELITAIHPHQNLMEYVNLASMSQDGV--DEILDKQLVGACNIQ----EVRELARIGH 358
+++E+ + L + GV DE ++L ++ E+ +
Sbjct: 291 LLWEIFS-------------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML 337
Query: 359 KCLHKTPRKRPSIGEVTQALLKIKQRHLAKQD 390
C H P +RP+ E+ + L + Q + A+QD
Sbjct: 338 DCWHGEPSQRPTFSELVEHLGNLLQAN-AQQD 368
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 125 LGQGAFGPVYKA------TMPSGGVAAIKVLASD-SHQGEKEFQTEVSLLGRL-HHRNLV 176
LG+GAFG V +A + A+K+L +H + +E+ +L + HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 177 NLIGYCVDK-GKYMLIYEFMSNGSLSNLIYSE 207
NL+G C G M+I EF G+LS + S+
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 128
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 32/212 (15%)
Query: 194 FMSNGSLSNLIYSE------ERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSAN 247
F+ SLS++ E + L E + + ++ G+E+L A IHRDL + N
Sbjct: 172 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 228
Query: 248 ILLDHFMRAKVADFGLSKEEVFDG---RNSGLKGTYGYIDPAYISTNKFTMKSDIFSFGV 304
ILL K+ DFGL+++ D R + ++ P I +T++SD++SFGV
Sbjct: 229 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 288
Query: 305 IIFELITAIHPHQNLMEYVNLASMSQDGV--DEILDKQLVGACNIQ----EVRELARIGH 358
+++E+ + L + GV DE ++L ++ E+ +
Sbjct: 289 LLWEIFS-------------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML 335
Query: 359 KCLHKTPRKRPSIGEVTQALLKIKQRHLAKQD 390
C H P +RP+ E+ + L + Q + A+QD
Sbjct: 336 DCWHGEPSQRPTFSELVEHLGNLLQAN-AQQD 366
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 125 LGQGAFGPVYKA------TMPSGGVAAIKVLASD-SHQGEKEFQTEVSLLGRL-HHRNLV 176
LG+GAFG V +A + A+K+L +H + +E+ +L + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 177 NLIGYCVDK-GKYMLIYEFMSNGSLSNLIYSE 207
NL+G C G M+I EF G+LS + S+
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 126
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 11/178 (6%)
Query: 161 QTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIA 220
+TE+ +L +L+H ++ + + D Y ++ E M G L + + +R+ +L
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF- 120
Query: 221 LDISHGIEYLHEGAVPPVIHRDLKSANILL---DHFMRAKVADFGLSKEEVFDGRNSGLK 277
+ ++YLHE + IHRDLK N+LL + K+ DFG SK L
Sbjct: 121 YQMLLAVQYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 177
Query: 278 GTYGYIDP---AYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDG 332
GT Y+ P + T + D +S GVI+F ++ P V+L G
Sbjct: 178 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 235
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 119 QNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRLHH 172
+NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
N+V L+ + K L++EF+ + S + + G+ + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYISTN 291
V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 122 HRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGX 178
Query: 292 K-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVT 199
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 12/203 (5%)
Query: 117 ATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRL 170
+ +NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 60
Query: 171 HHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYL 230
+H N+V L+ + K L++EF+ + S + + G+ +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 231 HEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYIS 289
H V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 121 HSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 177
Query: 290 TNK-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 119 QNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRLHH 172
+NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
N+V L+ + K L++EF+ + S + + G+ + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYISTN 291
V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 122 HRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 292 K-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 12/203 (5%)
Query: 117 ATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRL 170
+ +NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 62
Query: 171 HHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYL 230
+H N+V L+ + K L++EF+ + S + + G+ +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 231 HEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYIS 289
H V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 123 HSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 290 TNK-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 12/203 (5%)
Query: 117 ATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRL 170
+ +NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 61
Query: 171 HHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYL 230
+H N+V L+ + K L++EF+ + S + + G+ +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 231 HEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYIS 289
H V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 122 HSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 290 TNK-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 126/268 (47%), Gaps = 35/268 (13%)
Query: 121 FTNI--LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLV 176
+TN+ +G+GA+G V A V AIK ++ HQ + E+ +L R H N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 177 NL----IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+ +++ K + I + + L L+ ++ L+ + I G++Y+H
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHS 140
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY----GYIDPAYI 288
V +HRDLK +N+LL+ K+ DFGL++ D ++G Y Y P +
Sbjct: 141 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 289 STNK-FTMKSDIFSFGVIIFELIT--AIHPHQNLMEYVN-----LASMSQDGVDEILDKQ 340
+K +T DI+S G I+ E+++ I P ++ ++ +N L S Q+ ++ I+
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCII--- 254
Query: 341 LVGACNIQEVRELARIGHKCLHKTPRKR 368
N++ L + HK +K P R
Sbjct: 255 -----NLKARNYLLSLPHK--NKVPWNR 275
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 12/203 (5%)
Query: 117 ATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRL 170
+ +NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 59
Query: 171 HHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYL 230
+H N+V L+ + K L++EF+ + S + + G+ +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 231 HEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYIS 289
H V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 120 HSHRV---LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 290 TNK-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 12/203 (5%)
Query: 117 ATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRL 170
+ +NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 61
Query: 171 HHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYL 230
+H N+V L+ + K L++EF+ + S + + G+ +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 231 HEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYIS 289
H V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 122 HSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 290 TNK-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 12/203 (5%)
Query: 117 ATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRL 170
+ +NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 59
Query: 171 HHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYL 230
+H N+V L+ + K L++EF+ + S + + G+ +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 231 HEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYIS 289
H V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 120 HSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 290 TNK-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 12/203 (5%)
Query: 117 ATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRL 170
+ +NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 60
Query: 171 HHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYL 230
+H N+V L+ + K L++EF+ + S + + G+ +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 231 HEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYIS 289
H V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 121 HSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 290 TNK-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 119 QNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRLHH 172
+NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L+H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 65
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
N+V L+ + K L++EF+ + S + + G+ + H
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYISTN 291
V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 126 HRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 182
Query: 292 K-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 183 KYYSTAVDIWSLGCIFAEMVT 203
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 119 QNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRLHH 172
+NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 60
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
N+V L+ + K L++EF+ + S + + G+ + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYISTN 291
V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 121 HRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 292 K-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVT 198
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 119 QNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRLHH 172
+NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L+H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 68
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
N+V L+ + K L++EF+ + S + + G+ + H
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYISTN 291
V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 129 HRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 185
Query: 292 K-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVT 206
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 12/203 (5%)
Query: 117 ATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRL 170
+ +NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 61
Query: 171 HHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYL 230
+H N+V L+ + K L++EF+ + S + + G+ +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 231 HEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYIS 289
H V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 122 HSHRV---LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 290 TNK-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 119 QNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRLHH 172
+NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L+H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 68
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
N+V L+ + K L++EF+ + S + + G+ + H
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYISTN 291
V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 129 HRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGX 185
Query: 292 K-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 186 KYYSTAVDIWSLGCIFAEMVT 206
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 25/200 (12%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGE---KEFQTEVSLLGRLHHRNLVNLIG 180
+G GA+G V A SG AIK L S Q E K E+ LL + H N++ L+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKL-SRPFQSEIFAKRAYRELLLLKHMQHENVIGLLD 90
Query: 181 YCVDKGK------YMLIYEFMSNG--SLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+ L+ FM + L +SEE++ + + G++Y+H
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY------LVYQMLKGLKYIHS 144
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYI-STN 291
V +HRDLK N+ ++ K+ DFGL++ D +G T Y P I S
Sbjct: 145 AGV---VHRDLKPGNLAVNEDCELKILDFGLARHA--DAEMTGYVVTRWYRAPEVILSWM 199
Query: 292 KFTMKSDIFSFGVIIFELIT 311
+ DI+S G I+ E++T
Sbjct: 200 HYNQTVDIWSVGCIMAEMLT 219
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 12/203 (5%)
Query: 117 ATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRL 170
+ +NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 60
Query: 171 HHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYL 230
+H N+V L+ + K L++EF+ + S + + G+ +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 231 HEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYIS 289
H V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 121 HSHRV---LHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 290 TNK-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 12/203 (5%)
Query: 117 ATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRL 170
+ +NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 59
Query: 171 HHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYL 230
+H N+V L+ + K L++EF+ + S + + G+ +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 231 HEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYIS 289
H V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 120 HSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 290 TNK-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 28/207 (13%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGR--LHHRNLVNLIGYC 182
+G+G +G V++ + G A+K+ +S + EK + E L L H N++ I
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 183 V----DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLH-----EG 233
+ + LI + GSL + Y + L+ L+I L I+ G+ +LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYD--YLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLS-----KEEVFDGRNSGLKGTYGYIDPAY- 287
P + HRDLKS NIL+ + +AD GL+ D N+ GT Y+ P
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 288 ---ISTNKFT--MKSDIFSFGVIIFEL 309
I + F + DI++FG++++E+
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 119 QNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRLHH 172
+NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
N+V L+ + K L++EF+ + S + + G+ + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYISTN 291
V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 122 HRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 292 K-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVT 199
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 12/203 (5%)
Query: 117 ATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRL 170
+ +NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 59
Query: 171 HHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYL 230
+H N+V L+ + K L++EF+ + S + + G+ +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 231 HEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYIS 289
H V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 120 HSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 290 TNK-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 11/141 (7%)
Query: 163 EVSLLGRLHHRNLVNLIGYCVDKGK--YMLIYEFMSNGSLSNLIYSEERVLNWEERLQIA 220
E+++L +L H N+V L+ D + +++E ++ G + + + L+ ++
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV--PTLKPLSEDQARFYF 143
Query: 221 LDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
D+ GIEYLH + IHRD+K +N+L+ K+ADFG+S E F G ++ L T
Sbjct: 144 QDLIKGIEYLHYQKI---IHRDIKPSNLLVGEDGHIKIADFGVSNE--FKGSDALLSNTV 198
Query: 281 GYIDPAYISTNKFTMKSDIFS 301
G PA+++ + IFS
Sbjct: 199 G--TPAFMAPESLSETRKIFS 217
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 119 QNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRLHH 172
+NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 60
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
N+V L+ + K L++EF+ + S + + G+ + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYISTN 291
V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 121 HRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 292 K-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVT 198
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 118/277 (42%), Gaps = 37/277 (13%)
Query: 121 FTNILGQGAFGPVYKATMPSGG--------VAAIKVLASDSHQGEKEFQTEVSLLGRLHH 172
F LGQG F ++K G +KVL + F S++ +L H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
++LV G CV + +L+ EF+ GSL + + +N +L++A ++ + +L E
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEE 131
Query: 233 GAVPPVIHRDLKSANILL----------DHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+IH ++ + NILL F+ K++D G+S + L+ +
Sbjct: 132 NT---LIHGNVCAKNILLIREEDRKTGNPPFI--KLSDPGISITVL---PKDILQERIPW 183
Query: 283 IDPAYISTNK-FTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQL 341
+ P I K + +D +SFG ++E+ + + ++ SQ + D+
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD-------SQRKLQFYEDRHQ 236
Query: 342 VGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
+ A + ELA + + C+ P RPS + + L
Sbjct: 237 LPA---PKAAELANLINNCMDYEPDHRPSFRAIIRDL 270
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 119 QNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRLHH 172
+NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
N+V L+ + K L++EF+ + S + + G+ + H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYISTN 291
V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 122 HRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGC 178
Query: 292 K-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVT 199
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 12/203 (5%)
Query: 117 ATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRL 170
+ +NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 62
Query: 171 HHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYL 230
+H N+V L+ + K L++EF+ + S + + G+ +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 231 HEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYIS 289
H V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 123 HSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 290 TNK-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 119 QNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRLHH 172
+NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 60
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
N+V L+ + K L++EF+ + S + + G+ + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYISTN 291
V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 121 HRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 177
Query: 292 K-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVT 198
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 119 QNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRLHH 172
+NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 60
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
N+V L+ + K L++EF+ + S + + G+ + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYISTN 291
V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 121 HRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 177
Query: 292 K-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVT 198
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 28/207 (13%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGR--LHHRNLVNLIGYC 182
+G+G +G V++ + G A+K+ +S + EK + E L L H N++ I
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSS---RDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 183 V----DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLH-----EG 233
+ + LI + GSL + Y + L+ L+I L I+ G+ +LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYD--YLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLS-----KEEVFDGRNSGLKGTYGYIDPAY- 287
P + HRDLKS NIL+ + +AD GL+ D N+ GT Y+ P
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 288 ---ISTNKFT--MKSDIFSFGVIIFEL 309
I + F + DI++FG++++E+
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 125 LGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGE-KEFQTEVSLLGRLHH-RNLVNLIGY 181
+G G G V+K +G V A+K + ++ E K ++ ++ + H +V G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 182 CVDKGKYMLIYEFMSNGSLSNLIYSE------ERVLNWEERLQIALDISHGIEYLHEGAV 235
+ + E M G+ + + ER+L ++ + I + YL E
Sbjct: 93 FITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILG-----KMTVAIVKALYYLKEKH- 144
Query: 236 PPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY-----IDPAYIST 290
VIHRD+K +NILLD + K+ DFG+S V D G Y IDP +
Sbjct: 145 -GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTK 203
Query: 291 NKFTMKSDIFSFGVIIFELITAIHPHQN 318
+ +++D++S G+ + EL T P++N
Sbjct: 204 PDYDIRADVWSLGISLVELATGQFPYKN 231
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 12/203 (5%)
Query: 117 ATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRL 170
+ +NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 63
Query: 171 HHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYL 230
+H N+V L+ + K L++EF+ + S + + G+ +
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 231 HEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYIS 289
H V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 124 HSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 180
Query: 290 TNK-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 27/225 (12%)
Query: 106 IPRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVS 165
+P + I K Q I G+G +G V+ G A+KV + + + +TE+
Sbjct: 27 LPLLVQRTIAKQIQMVKQI-GKGRYGEVWMGKW-RGEKVAVKVFFT-TEEASWFRETEIY 83
Query: 166 LLGRLHHRNLVNLIGYCVDKG-----KYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIA 220
+ H N++ I + KG + LI ++ NGSL + Y + L+ + L++A
Sbjct: 84 QTVLMRHENILGFIAADI-KGTGSWTQLYLITDYHENGSLYD--YLKSTTLDAKSMLKLA 140
Query: 221 LDISHGIEYLHEGAV-----PPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSG 275
G+ +LH P + HRDLKS NIL+ +AD GL+ + + D
Sbjct: 141 YSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVD 200
Query: 276 LK-----GTYGYIDPAY----ISTNKFT--MKSDIFSFGVIIFEL 309
+ GT Y+ P ++ N F + +D++SFG+I++E+
Sbjct: 201 IPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V M +G A+K+L KE + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+++D +V DFGL+K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLMIDQQGYIQVTDFGLAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 123 NILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLH-HRNLVNLIG 180
++LG+GA V + + A+K++ EV +L + HRN++ LI
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIE 78
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
+ ++ ++ L++E M GS+ + I+ + R N E + D++ +++LH + H
Sbjct: 79 FFEEEDRFYLVFEKMRGGSILSHIH-KRRHFNELEASVVVQDVASALDFLHNKG---IAH 134
Query: 241 RDLKSANILLDH---FMRAKVADFGLSKEEVFDGRNSGLK--------GTYGYIDPAYI- 288
RDLK NIL +H K+ DFGL +G S + G+ Y+ P +
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVE 194
Query: 289 ----STNKFTMKSDIFSFGVIIFELITAIHP 315
+ + + D++S GVI++ L++ P
Sbjct: 195 AFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 119 QNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRLHH 172
+NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L+H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 62
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
N+V L+ + K L++EF+ + S + + G+ + H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYISTN 291
V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 123 HRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 179
Query: 292 K-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 180 KYYSTAVDIWSLGCIFAEMVT 200
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 12/203 (5%)
Query: 117 ATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRL 170
+ +NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 59
Query: 171 HHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYL 230
+H N+V L+ + K L++EF+ + S + + G+ +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 231 HEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYIS 289
H V +HRDLK N+L++ K+ADFGL++ R + T Y P +
Sbjct: 120 HSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 290 TNK-FTMKSDIFSFGVIIFELIT 311
K ++ DI+S G I E++T
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 12/203 (5%)
Query: 120 NFTNILGQGAFGPVYKAT--MPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
+ LG+GA+G V A + VA V + + + E+ + L+H N+V
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVK 69
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL-DISHGIEYLHEGAVP 236
G+ + L E+ S G L + I E + E Q + G+ YLH +
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGI- 126
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK---GTYGYIDPAYISTNKF 293
HRD+K N+LLD K++DFGL+ ++ R L GT Y+ P + +F
Sbjct: 127 --THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 294 TMKS-DIFSFGVIIFELITAIHP 315
+ D++S G+++ ++ P
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 126/268 (47%), Gaps = 35/268 (13%)
Query: 121 FTNI--LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLV 176
+TN+ +G+GA+G V A V AIK ++ HQ + E+ +L H N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 177 NL----IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+ +++ K + I + + L L+ ++ L+ + I G++Y+H
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHS 144
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY----GYIDPAYI 288
V +HRDLK +N+LL+ K+ DFGL++ D ++G Y Y P +
Sbjct: 145 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 289 STNK-FTMKSDIFSFGVIIFELIT--AIHPHQNLMEYVN-----LASMSQDGVDEILDKQ 340
+K +T DI+S G I+ E+++ I P ++ ++ +N L S SQ+ ++ I+
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII--- 258
Query: 341 LVGACNIQEVRELARIGHKCLHKTPRKR 368
N++ L + HK +K P R
Sbjct: 259 -----NLKARNYLLSLPHK--NKVPWNR 279
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 10/202 (4%)
Query: 120 NFTNILGQGAFGPVYKAT--MPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
+ LG+GA+G V A + VA V + + + E+ + L+H N+V
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
G+ + L E+ S G L + I + + + + + G+ YLH +
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGI-- 125
Query: 238 VIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN---SGLKGTYGYIDPAYISTNKFT 294
HRD+K N+LLD K++DFGL+ ++ R + + GT Y+ P + +F
Sbjct: 126 -THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 295 MKS-DIFSFGVIIFELITAIHP 315
+ D++S G+++ ++ P
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP 206
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 11/178 (6%)
Query: 161 QTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIA 220
+TE+ +L +L+H ++ + + D Y ++ E M G L + + +R+ +L
Sbjct: 188 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF- 245
Query: 221 LDISHGIEYLHEGAVPPVIHRDLKSANILL---DHFMRAKVADFGLSKEEVFDGRNSGLK 277
+ ++YLHE + IHRDLK N+LL + K+ DFG SK L
Sbjct: 246 YQMLLAVQYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 302
Query: 278 GTYGYIDP---AYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDG 332
GT Y+ P + T + D +S GVI+F ++ P V+L G
Sbjct: 303 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 360
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 86/195 (44%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V SG A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+++ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ PA I + + D +
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPAIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V M +G A+K+L K+ + E +L ++ LV L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E++ G + + + R R A I EYLH +I+
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS---LDLIY 165
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 224 ALGVLIYEMAAGYPP 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V M +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E++ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V M +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E++ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 120 NFTNILGQGAFGPVYKAT--MPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
+ LG+GA+G V A + VA V + + + E+ + L+H N+V
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL-DISHGIEYLHEGAVP 236
G+ + L E+ S G L + I E + E Q + G+ YLH +
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGI- 125
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN---SGLKGTYGYIDPAYISTNKF 293
HRD+K N+LLD K++DFGL+ ++ R + + GT Y+ P + +F
Sbjct: 126 --THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 294 TMKS-DIFSFGVIIFELITAIHP 315
+ D++S G+++ ++ P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 120 NFTNILGQGAFGPVYKAT--MPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
+ LG+GA+G V A + VA V + + + E+ + L+H N+V
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL-DISHGIEYLHEGAVP 236
G+ + L E+ S G L + I E + E Q + G+ YLH +
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGI- 125
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN---SGLKGTYGYIDPAYISTNKF 293
HRD+K N+LLD K++DFGL+ ++ R + + GT Y+ P + +F
Sbjct: 126 --THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 294 TMKS-DIFSFGVIIFELITAIHP 315
+ D++S G+++ ++ P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 12/203 (5%)
Query: 120 NFTNILGQGAFGPVYKAT--MPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
+ LG+GA+G V A + VA V + + + E+ + L+H N+V
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL-DISHGIEYLHEGAVP 236
G+ + L E+ S G L + I E + E Q + G+ YLH +
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGI- 125
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK---GTYGYIDPAYISTNKF 293
HRD+K N+LLD K++DFGL+ ++ R L GT Y+ P + +F
Sbjct: 126 --THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 294 TMKS-DIFSFGVIIFELITAIHP 315
+ D++S G+++ ++ P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 10/202 (4%)
Query: 120 NFTNILGQGAFGPVYKAT--MPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
+ LG+GA+G V A + VA V + + + E+ + L+H N+V
Sbjct: 8 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 67
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
G+ + L E+ S G L + I + + + + + G+ YLH +
Sbjct: 68 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGI-- 124
Query: 238 VIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK---GTYGYIDPAYISTNKFT 294
HRD+K N+LLD K++DFGL+ ++ R L GT Y+ P + +F
Sbjct: 125 -THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183
Query: 295 MKS-DIFSFGVIIFELITAIHP 315
+ D++S G+++ ++ P
Sbjct: 184 AEPVDVWSCGIVLTAMLAGELP 205
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 31/205 (15%)
Query: 194 FMSNGSLSNLIYSE------ERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSAN 247
F+ SLS++ E + L E + + ++ G+E+L A IHRDL + N
Sbjct: 167 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 223
Query: 248 ILLDHFMRAKVADFGLSKEEVFDG---RNSGLKGTYGYIDPAYISTNKFTMKSDIFSFGV 304
ILL K+ DFGL+++ D R + ++ P I +T++SD++SFGV
Sbjct: 224 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 283
Query: 305 IIFELITAIHPHQNLMEYVNLASMSQDGV--DEILDKQLVGACNIQ----EVRELARIGH 358
+++E+ + L + GV DE ++L ++ E+ +
Sbjct: 284 LLWEIFS-------------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML 330
Query: 359 KCLHKTPRKRPSIGEVTQALLKIKQ 383
C H P +RP+ E+ + L + Q
Sbjct: 331 DCWHGEPSQRPTFSELVEHLGNLLQ 355
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 125 LGQGAFGPVYKA------TMPSGGVAAIKVLASD-SHQGEKEFQTEVSLLGRL-HHRNLV 176
LG+GAFG V +A + A+K+L +H + +E+ +L + HH N+V
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 177 NLIGYCVDK-GKYMLIYEFMSNGSLSNLIYSE 207
NL+G C G M+I EF G+LS + S+
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 121
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V M +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+++ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 10/202 (4%)
Query: 120 NFTNILGQGAFGPVYKAT--MPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
+ LG+GA+G V A + VA V + + + E+ + L+H N+V
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
G+ + L E+ S G L + I + + + + + G+ YLH +
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGI-- 126
Query: 238 VIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK---GTYGYIDPAYISTNKFT 294
HRD+K N+LLD K++DFGL+ ++ R L GT Y+ P + +F
Sbjct: 127 -THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 295 MKS-DIFSFGVIIFELITAIHP 315
+ D++S G+++ ++ P
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 10/202 (4%)
Query: 120 NFTNILGQGAFGPVYKAT--MPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
+ LG+GA+G V A + VA V + + + E+ + L+H N+V
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
G+ + L E+ S G L + I + + + + + G+ YLH +
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGI-- 125
Query: 238 VIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN---SGLKGTYGYIDPAYISTNKFT 294
HRD+K N+LLD K++DFGL+ ++ R + + GT Y+ P + +F
Sbjct: 126 -THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFH 184
Query: 295 MKS-DIFSFGVIIFELITAIHP 315
+ D++S G+++ ++ P
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP 206
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 84/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V M +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+++D KV DFG +K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLMIDQQGYIKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 12/203 (5%)
Query: 120 NFTNILGQGAFGPVYKAT--MPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
+ LG+GA+G V A + VA V + + + E+ + L+H N+V
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL-DISHGIEYLHEGAVP 236
G+ + L E+ S G L + I E + E Q + G+ YLH +
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGI- 126
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK---GTYGYIDPAYISTNKF 293
HRD+K N+LLD K++DFGL+ ++ R L GT Y+ P + +F
Sbjct: 127 --THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 294 TMKS-DIFSFGVIIFELITAIHP 315
+ D++S G+++ ++ P
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 12/203 (5%)
Query: 120 NFTNILGQGAFGPVYKAT--MPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
+ LG+GA+G V A + VA V + + + E+ + L+H N+V
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL-DISHGIEYLHEGAVP 236
G+ + L E+ S G L + I E + E Q + G+ YLH +
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGI- 126
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK---GTYGYIDPAYISTNKF 293
HRD+K N+LLD K++DFGL+ ++ R L GT Y+ P + +F
Sbjct: 127 --THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 294 TMKS-DIFSFGVIIFELITAIHP 315
+ D++S G+++ ++ P
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 12/203 (5%)
Query: 120 NFTNILGQGAFGPVYKAT--MPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
+ LG+GA+G V A + VA V + + + E+ + L+H N+V
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL-DISHGIEYLHEGAVP 236
G+ + L E+ S G L + I E + E Q + G+ YLH +
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGI- 126
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK---GTYGYIDPAYISTNKF 293
HRD+K N+LLD K++DFGL+ ++ R L GT Y+ P + +F
Sbjct: 127 --THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 294 TMKS-DIFSFGVIIFELITAIHP 315
+ D++S G+++ ++ P
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 31/205 (15%)
Query: 194 FMSNGSLSNLIYSE------ERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSAN 247
F+ SLS++ E + L E + + ++ G+E+L A IHRDL + N
Sbjct: 165 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 221
Query: 248 ILLDHFMRAKVADFGLSKEEVFDG---RNSGLKGTYGYIDPAYISTNKFTMKSDIFSFGV 304
ILL K+ DFGL+++ D R + ++ P I +T++SD++SFGV
Sbjct: 222 ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 281
Query: 305 IIFELITAIHPHQNLMEYVNLASMSQDGV--DEILDKQLVGACNIQ----EVRELARIGH 358
+++E+ + L + GV DE ++L ++ E+ +
Sbjct: 282 LLWEIFS-------------LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTML 328
Query: 359 KCLHKTPRKRPSIGEVTQALLKIKQ 383
C H P +RP+ E+ + L + Q
Sbjct: 329 DCWHGEPSQRPTFSELVEHLGNLLQ 353
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 125 LGQGAFGPVYKA------TMPSGGVAAIKVLASD-SHQGEKEFQTEVSLLGRL-HHRNLV 176
LG+GAFG V +A + A+K+L +H + +E+ +L + HH N+V
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 177 NLIGYCVDK-GKYMLIYEFMSNGSLSNLIYSE 207
NL+G C G M+I EF G+LS + S+
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 119
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 12/203 (5%)
Query: 120 NFTNILGQGAFGPVYKAT--MPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
+ LG+GA+G V A + VA V + + + E+ + L+H N+V
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL-DISHGIEYLHEGAVP 236
G+ + L E+ S G L + I E + E Q + G+ YLH +
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGI- 125
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK---GTYGYIDPAYISTNKF 293
HRD+K N+LLD K++DFGL+ ++ R L GT Y+ P + +F
Sbjct: 126 --THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 294 TMKS-DIFSFGVIIFELITAIHP 315
+ D++S G+++ ++ P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 11/178 (6%)
Query: 161 QTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIA 220
+TE+ +L +L+H ++ + + D Y ++ E M G L + + +R+ +L
Sbjct: 202 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF- 259
Query: 221 LDISHGIEYLHEGAVPPVIHRDLKSANILL---DHFMRAKVADFGLSKEEVFDGRNSGLK 277
+ ++YLHE + IHRDLK N+LL + K+ DFG SK L
Sbjct: 260 YQMLLAVQYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 316
Query: 278 GTYGYIDP---AYISTNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDG 332
GT Y+ P + T + D +S GVI+F ++ P V+L G
Sbjct: 317 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 374
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 10/202 (4%)
Query: 120 NFTNILGQGAFGPVYKAT--MPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
+ LG+GA+G V A + VA V + + + E+ + L+H N+V
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
G+ + L E+ S G L + I + + + + + G+ YLH +
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGI-- 125
Query: 238 VIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK---GTYGYIDPAYISTNKFT 294
HRD+K N+LLD K++DFGL+ ++ R L GT Y+ P + +F
Sbjct: 126 -THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 295 MKS-DIFSFGVIIFELITAIHP 315
+ D++S G+++ ++ P
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP 206
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 120 NFTNILGQGAFGPVYKAT--MPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
+ LG+GA+G V A + VA V + + + E+ + L+H N+V
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 69
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL-DISHGIEYLHEGAVP 236
G+ + L E+ S G L + I E + E Q + G+ YLH +
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGI- 126
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN---SGLKGTYGYIDPAYISTNKF 293
HRD+K N+LLD K++DFGL+ ++ R + + GT Y+ P + +F
Sbjct: 127 --THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 184
Query: 294 TMKS-DIFSFGVIIFELITAIHP 315
+ D++S G+++ ++ P
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 109/231 (47%), Gaps = 38/231 (16%)
Query: 124 ILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSL--LGRLHHRNLVNLI-- 179
++G+G +G VYK ++ VA +KV + + Q F E ++ + + H N+ I
Sbjct: 20 LIGRGRYGAVYKGSLDERPVA-VKVFSFANRQN---FINEKNIYRVPLMEHDNIARFIVG 75
Query: 180 --GYCVD-KGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLH----- 231
D + +Y+L+ E+ NGSL Y +W ++A ++ G+ YLH
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXK--YLSLHTSDWVSSCRLAHSVTRGLAYLHTELPR 133
Query: 232 -EGAVPPVIHRDLKSANILLDHFMRAKVADFGLS-----KEEVFDGR--NSGLK--GTYG 281
+ P + HRDL S N+L+ + ++DFGLS V G N+ + GT
Sbjct: 134 GDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIR 193
Query: 282 YIDPAYI--STNKFTMKS-----DIFSFGVIIFELI---TAIHPHQNLMEY 322
Y+ P + + N +S D+++ G+I +E+ T + P +++ EY
Sbjct: 194 YMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEY 244
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 10/202 (4%)
Query: 120 NFTNILGQGAFGPVYKAT--MPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
+ LG+GA+G V A + VA V + + + E+ + L+H N+V
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
G+ + L E+ S G L + I + + + + + G+ YLH +
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGI-- 125
Query: 238 VIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK---GTYGYIDPAYISTNKFT 294
HRD+K N+LLD K++DFGL+ ++ R L GT Y+ P + +F
Sbjct: 126 -THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 295 MKS-DIFSFGVIIFELITAIHP 315
+ D++S G+++ ++ P
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP 206
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 98/205 (47%), Gaps = 24/205 (11%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCV- 183
+G+G +G V++ + G A+K+ +S Q +TE+ L H N++ I +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFR-ETEIYNTVLLRHDNILGFIASDMT 73
Query: 184 ---DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLH-----EGAV 235
+ LI + +GSL + + + + L L++A+ + G+ +LH
Sbjct: 74 SRNSSTQLWLITHYHEHGSLYDFL--QRQTLEPHLALRLAVSAACGLAHLHVEIFGTQGK 131
Query: 236 PPVIHRDLKSANILLDHFMRAKVADFGLS-----KEEVFDGRNSGLKGTYGYIDPAY--- 287
P + HRD KS N+L+ ++ +AD GL+ + D N+ GT Y+ P
Sbjct: 132 PAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDE 191
Query: 288 -ISTNKFT--MKSDIFSFGVIIFEL 309
I T+ F +DI++FG++++E+
Sbjct: 192 QIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 10/202 (4%)
Query: 120 NFTNILGQGAFGPVYKAT--MPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
+ LG+GA+G V A + VA V + + + E+ + L+H N+V
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
G+ + L E+ S G L + I + + + + + G+ YLH +
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGI-- 125
Query: 238 VIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK---GTYGYIDPAYISTNKFT 294
HRD+K N+LLD K++DFGL+ ++ R L GT Y+ P + +F
Sbjct: 126 -THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 295 MKS-DIFSFGVIIFELITAIHP 315
+ D++S G+++ ++ P
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 10/202 (4%)
Query: 120 NFTNILGQGAFGPVYKAT--MPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
+ LG+GA+G V A + VA V + + + E+ + L+H N+V
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
G+ + L E+ S G L + I + + + + + G+ YLH +
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGI-- 125
Query: 238 VIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK---GTYGYIDPAYISTNKFT 294
HRD+K N+LLD K++DFGL+ ++ R L GT Y+ P + +F
Sbjct: 126 -THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 295 MKS-DIFSFGVIIFELITAIHP 315
+ D++S G+++ ++ P
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP 206
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 10/202 (4%)
Query: 120 NFTNILGQGAFGPVYKAT--MPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
+ LG+GA+G V A + VA V + + + E+ + L+H N+V
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
G+ + L E+ S G L + I + + + + + G+ YLH +
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGI-- 125
Query: 238 VIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK---GTYGYIDPAYISTNKFT 294
HRD+K N+LLD K++DFGL+ ++ R L GT Y+ P + +F
Sbjct: 126 -THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 184
Query: 295 MKS-DIFSFGVIIFELITAIHP 315
+ D++S G+++ ++ P
Sbjct: 185 AEPVDVWSCGIVLTAMLAGELP 206
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 12/203 (5%)
Query: 120 NFTNILGQGAFGPVYKAT--MPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
+ LG+GA+G V A + VA V + + + E+ + L+H N+V
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL-DISHGIEYLHEGAVP 236
G+ + L E+ S G L + I E + E Q + G+ YLH +
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGI- 126
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK---GTYGYIDPAYISTNKF 293
HRD+K N+LLD K++DFGL+ ++ R L GT Y+ P + +F
Sbjct: 127 --THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 294 TMKS-DIFSFGVIIFELITAIHP 315
+ D++S G+++ ++ P
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 10/202 (4%)
Query: 120 NFTNILGQGAFGPVYKAT--MPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
+ LG+GA+G V A + VA V + + + E+ + L+H N+V
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
G+ + L E+ S G L + I + + + + + G+ YLH +
Sbjct: 70 FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHGIGI-- 126
Query: 238 VIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK---GTYGYIDPAYISTNKFT 294
HRD+K N+LLD K++DFGL+ ++ R L GT Y+ P + +F
Sbjct: 127 -THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 185
Query: 295 MKS-DIFSFGVIIFELITAIHP 315
+ D++S G+++ ++ P
Sbjct: 186 AEPVDVWSCGIVLTAMLAGELP 207
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 122/280 (43%), Gaps = 21/280 (7%)
Query: 125 LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT-EVSLLGRLHHRNLVNLIGYC 182
LG+G + VYK + + + A+K + + +G EVSLL L H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRD 242
+ L++E++ + L + ++N + G+ Y H V +HRD
Sbjct: 70 HTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKV---LHRD 125
Query: 243 LKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYI--STNKFTMKSDIF 300
LK N+L++ K+ADFGL++ + + + + P I + ++ + D++
Sbjct: 126 LKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMW 185
Query: 301 SFGVIIFELITA--IHPHQNLMEYVN-----LASMSQDGVDEILDKQLVGACNIQEVREL 353
G I +E+ T + P + E ++ L + +++ IL + N + R
Sbjct: 186 GVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAE 245
Query: 354 ARIGHKCLHKTPRKRPSIGEVTQALLKIKQRH-LAKQDTM 392
A + H PR ++ LL+ + R+ ++ +D M
Sbjct: 246 ALLSH-----APRLDSDGADLLTKLLQFEGRNRISAEDAM 280
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 25/201 (12%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGE---KEFQTEVSLLGRLHHRNLVNLIG 180
+G GA+G V A SG AIK L S Q E K E+ LL + H N++ L+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKL-SRPFQSEIFAKRAYRELLLLKHMQHENVIGLLD 108
Query: 181 YCVDKGK------YMLIYEFMSNG--SLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+ L+ FM + + +SEE++ + + G++Y+H
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY------LVYQMLKGLKYIHS 162
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYI-STN 291
V +HRDLK N+ ++ K+ DFGL++ D +G T Y P I S
Sbjct: 163 AGV---VHRDLKPGNLAVNEDCELKILDFGLARHA--DAEMTGYVVTRWYRAPEVILSWM 217
Query: 292 KFTMKSDIFSFGVIIFELITA 312
+ DI+S G I+ E++T
Sbjct: 218 HYNQTVDIWSVGCIMAEMLTG 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V M +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E++ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V M +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E++ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V M +G A+K+L K+ + E +L ++ LV L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E++ G + + + R R A I EYLH +I+
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 165
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWTLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 224 ALGVLIYEMAAGYPP 238
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V M +G A+K+L K+ + E +L ++ LV L
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 94
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E++ G + + + R R A I EYLH + I+
Sbjct: 95 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDL---IY 150
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 151 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWTLCGTPEYLAPEIILSKGYNKAVDWW 208
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 209 ALGVLIYEMAAGYPP 223
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V M +G A+K+L K+ + E +L ++ LV L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E++ G + + + R R A I EYLH +I+
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 165
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 224 ALGVLIYEMAAGYPP 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V M +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E++ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 84/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V M +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+++D KV DFG +K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLMIDQQGYIKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 133/297 (44%), Gaps = 46/297 (15%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEF--QTEVSLLGRLHHRNLVNLIGY- 181
+G+G FG V++ G A+K+ +S + E+ + + E+ L H N++ I
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 182 CVDKGKY---MLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAV--- 235
D G + L+ ++ +GSL + Y + E +++AL + G+ +LH V
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 125
Query: 236 --PPVIHRDLKSANILLDHFMRAKVADFGL-----SKEEVFDGRNSGLKGTYGYIDPAYI 288
P + HRDLKS NIL+ +AD GL S + D + GT Y+ P +
Sbjct: 126 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 185
Query: 289 STNKFTMK-------SDIFSFGVIIFEL-----ITAIHPHQNLMEYVNLASMSQDGVDE- 335
+ MK +DI++ G++ +E+ I IH L Y +L S V+E
Sbjct: 186 D-DSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL-PYYDLVP-SDPSVEEM 242
Query: 336 ---ILDKQLVGAC-----NIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQR 384
+ +++L + + +R +A+I +C + R + + + L ++ Q+
Sbjct: 243 RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 299
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 117/277 (42%), Gaps = 37/277 (13%)
Query: 121 FTNILGQGAFGPVYKATMPSGG--------VAAIKVLASDSHQGEKEFQTEVSLLGRLHH 172
F LGQG F ++K G +KVL + F S++ +L H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
++LV G C + +L+ EF+ GSL + + +N +L++A ++ + +L E
Sbjct: 72 KHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMHFLEE 131
Query: 233 GAVPPVIHRDLKSANILL----------DHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+IH ++ + NILL F+ K++D G+S + L+ +
Sbjct: 132 NT---LIHGNVCAKNILLIREEDRKTGNPPFI--KLSDPGISITVL---PKDILQERIPW 183
Query: 283 IDPAYISTNK-FTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQL 341
+ P I K + +D +SFG ++E+ + + ++ SQ + D+
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD-------SQRKLQFYEDRHQ 236
Query: 342 VGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQAL 378
+ A + ELA + + C+ P RPS + + L
Sbjct: 237 LPA---PKAAELANLINNCMDYEPDHRPSFRAIIRDL 270
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 133/297 (44%), Gaps = 46/297 (15%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEF--QTEVSLLGRLHHRNLVNLIGY- 181
+G+G FG V++ G A+K+ +S + E+ + + E+ L H N++ I
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 182 CVDKGKY---MLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAV--- 235
D G + L+ ++ +GSL + Y + E +++AL + G+ +LH V
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 124
Query: 236 --PPVIHRDLKSANILLDHFMRAKVADFGL-----SKEEVFDGRNSGLKGTYGYIDPAYI 288
P + HRDLKS NIL+ +AD GL S + D + GT Y+ P +
Sbjct: 125 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 184
Query: 289 STNKFTMK-------SDIFSFGVIIFEL-----ITAIHPHQNLMEYVNLASMSQDGVDE- 335
+ MK +DI++ G++ +E+ I IH L Y +L S V+E
Sbjct: 185 D-DSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL-PYYDLVP-SDPSVEEM 241
Query: 336 ---ILDKQLVGAC-----NIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQR 384
+ +++L + + +R +A+I +C + R + + + L ++ Q+
Sbjct: 242 RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 10/200 (5%)
Query: 119 QNFTNI--LGQGAFGPVYKATMPSGG--VAAIKVLASDSHQGEKEFQT-EVSLLGRLHHR 173
+NF + +G+G +G VYKA G VA K+ +G E+SLL L+H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 174 NLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
N+V L+ + K L++EF+ + S + + G+ + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYISTNK 292
V +HRDLK N+L++ K+ADFGL++ R + T Y P + K
Sbjct: 123 RV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 293 -FTMKSDIFSFGVIIFELIT 311
++ DI+S G I E++T
Sbjct: 180 YYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 10/200 (5%)
Query: 119 QNFTNI--LGQGAFGPVYKATMPSGG--VAAIKVLASDSHQGEKEFQT-EVSLLGRLHHR 173
+NF + +G+G +G VYKA G VA K+ +G E+SLL L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 174 NLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
N+V L+ + K L++EF+ + S + + G+ + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYISTNK 292
V +HRDLK N+L++ K+ADFGL++ R + T Y P + K
Sbjct: 122 RV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 293 -FTMKSDIFSFGVIIFELIT 311
++ DI+S G I E++T
Sbjct: 179 YYSTAVDIWSLGCIFAEMVT 198
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 121/275 (44%), Gaps = 46/275 (16%)
Query: 123 NILGQGAFGP-VYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGY 181
++LG GA G VY+ + VA ++L ++E Q L H N++ +
Sbjct: 30 DVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQL---LRESDEHPNVIRY--F 84
Query: 182 CVDKGK-YMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
C +K + + I + +L + ++ E + + + G+ +LH + +H
Sbjct: 85 CTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNI---VH 141
Query: 241 RDLKSANILLDHF-----MRAKVADFGLSKEEVFD----GRNSGLKGTYGYIDPAYISTN 291
RDLK NIL+ ++A ++DFGL K+ R SG+ GT G+I P +S +
Sbjct: 142 RDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSED 201
Query: 292 ---KFTMKSDIFSFGVIIFELIT-AIHPH-QNLMEYVNLASMSQDGVDEILDKQLVGACN 346
T DIFS G + + +I+ HP ++L N+ L+GAC+
Sbjct: 202 CKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI---------------LLGACS 246
Query: 347 IQEVRE------LAR-IGHKCLHKTPRKRPSIGEV 374
+ + +AR + K + P+KRPS V
Sbjct: 247 LDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHV 281
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V SG A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+++ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLXGTPEYLAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 133/297 (44%), Gaps = 46/297 (15%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEF--QTEVSLLGRLHHRNLVNLIGY- 181
+G+G FG V++ G A+K+ +S + E+ + + E+ L H N++ I
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 182 CVDKGKY---MLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAV--- 235
D G + L+ ++ +GSL + Y + E +++AL + G+ +LH V
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 127
Query: 236 --PPVIHRDLKSANILLDHFMRAKVADFGL-----SKEEVFDGRNSGLKGTYGYIDPAYI 288
P + HRDLKS NIL+ +AD GL S + D + GT Y+ P +
Sbjct: 128 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 187
Query: 289 STNKFTMK-------SDIFSFGVIIFEL-----ITAIHPHQNLMEYVNLASMSQDGVDE- 335
+ MK +DI++ G++ +E+ I IH L Y +L S V+E
Sbjct: 188 D-DSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL-PYYDLVP-SDPSVEEM 244
Query: 336 ---ILDKQLVGAC-----NIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQR 384
+ +++L + + +R +A+I +C + R + + + L ++ Q+
Sbjct: 245 RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 301
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V SG A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+++ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 133/297 (44%), Gaps = 46/297 (15%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEF--QTEVSLLGRLHHRNLVNLIGY- 181
+G+G FG V++ G A+K+ +S + E+ + + E+ L H N++ I
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFSS---REERSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 182 CVDKGKY---MLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAV--- 235
D G + L+ ++ +GSL + Y + E +++AL + G+ +LH V
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFD--YLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 130
Query: 236 --PPVIHRDLKSANILLDHFMRAKVADFGL-----SKEEVFDGRNSGLKGTYGYIDPAYI 288
P + HRDLKS NIL+ +AD GL S + D + GT Y+ P +
Sbjct: 131 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL 190
Query: 289 STNKFTMK-------SDIFSFGVIIFEL-----ITAIHPHQNLMEYVNLASMSQDGVDE- 335
+ MK +DI++ G++ +E+ I IH L Y +L S V+E
Sbjct: 191 D-DSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL-PYYDLVP-SDPSVEEM 247
Query: 336 ---ILDKQLVGAC-----NIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQR 384
+ +++L + + +R +A+I +C + R + + + L ++ Q+
Sbjct: 248 RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 304
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V SG A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+++ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLAGTPEYLAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V SG A+K+L K+ + E +L ++ LV L
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 103
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+++ G + + + R R A I EYLH +I+
Sbjct: 104 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS---LDLIY 159
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 160 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 217
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 218 ALGVLIYEMAAGYPP 232
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V SG A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+++ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V SG A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+++ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V SG A+K+L K+ + E +L ++ LV L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+++ G + + + R R A I EYLH +I+
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS---LDLIY 185
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 186 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 243
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 244 ALGVLIYEMAAGYPP 258
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 28/209 (13%)
Query: 119 QNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRLHH 172
+NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L+H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 60
Query: 173 RNLVNLIGYCVDKGKYMLIYE--------FMSNGSLSNLIYSEERVLNWEERLQIALDIS 224
N+V L+ + K L++E FM +L+ + + +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIK--------SYLFQLL 112
Query: 225 HGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYI 283
G+ + H V +HRDLK N+L++ K+ADFGL++ R + T Y
Sbjct: 113 QGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 169
Query: 284 DPAYISTNK-FTMKSDIFSFGVIIFELIT 311
P + K ++ DI+S G I E++T
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V SG A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+++ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 113/256 (44%), Gaps = 40/256 (15%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHR 173
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q ++ +L H
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHC 73
Query: 174 NLVNLIGYCVDKG-KYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISH------- 225
N+V L + G K ++Y + + +Y RV R + L + +
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVY---RVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 226 ---GIEYLHEGAVPPVIHRDLKSANILLDHFMRA-KVADFGLSKEEVFDGRNSGLKGTYG 281
+ Y+H + HRD+K N+LLD K+ DFG +K+ V N +
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 282 YIDPAYI-STNKFTMKSDIFSFGVIIFELI--TAIHPHQNLMEYVNLASMSQDGVDEILD 338
Y P I +T D++S G ++ EL+ I P GVD++++
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP-------------GDSGVDQLVE 234
Query: 339 -KQLVGACNIQEVREL 353
+++G +++RE+
Sbjct: 235 IIKVLGTPTREQIREM 250
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 28/215 (13%)
Query: 120 NFTNILGQGAFGPVYKA-TMPSGGVAAIKVL-----ASDSHQGEKEFQTEVSLLGRLHHR 173
++G+GAF V + +G A+K++ S ++ + E S+ L H
Sbjct: 27 ELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHP 86
Query: 174 NLVNLIGYCVDKGKYMLIYEFMSNGSL---------SNLIYSEERVLNWEERLQIALDIS 224
++V L+ G +++EFM L + +YSE ++ ++ AL
Sbjct: 87 HIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL--- 143
Query: 225 HGIEYLHEGAVPPVIHRDLKSANILL---DHFMRAKVADFGLSKEEVFDGRNSGLK-GTY 280
Y H+ +IHRD+K N+LL ++ K+ DFG++ + G +G + GT
Sbjct: 144 ---RYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTP 197
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHP 315
++ P + + D++ GVI+F L++ P
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V SG A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+++ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 16/107 (14%)
Query: 217 LQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGL--------SKEEV 268
L I + I+ +E+LH + +HRDLK +NI KV DFGL ++ V
Sbjct: 167 LHIFIQIAEAVEFLHSKGL---MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 269 FD-----GRNSGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELI 310
+ G GT Y+ P I N ++ K DIFS G+I+FEL+
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 124 ILGQGAFGPV----YKATMPSGGVAAIKVLASDSHQGE--KEFQ----TEVSLLGRLH-H 172
ILG+G V +K T V I V S E +E + EV +L ++ H
Sbjct: 24 ILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH 83
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
N++ L + L+++ M G L + + +E+ L+ +E +I + I LH+
Sbjct: 84 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALLEVICALHK 142
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNK 292
+ +HRDLK NILLD M K+ DFG S + + + GT Y+ P I +
Sbjct: 143 LNI---VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSM 199
Query: 293 ------FTMKSDIFSFGVIIFELITAIHP 315
+ + D++S GVI++ L+ P
Sbjct: 200 NDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 28/211 (13%)
Query: 117 ATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRL 170
+ +NF + +G+G +G VYKA +G V A+K + D+ + E T E+SLL L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 62
Query: 171 HHRNLVNLIGYCVDKGKYMLIYE--------FMSNGSLSNLIYSEERVLNWEERLQIALD 222
+H N+V L+ + K L++E FM +L+ + +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIK--------SYLFQ 114
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK-GTYG 281
+ G+ + H V +HRDLK N+L++ K+ADFGL++ R + T
Sbjct: 115 LLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 171
Query: 282 YIDPAYISTNK-FTMKSDIFSFGVIIFELIT 311
Y P + K ++ DI+S G I E++T
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V M +G A+K+L K+ + E +L ++ L L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+ G + + + R R A I EYLH +I+
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHS---LDLIY 165
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+++D KV DFG +K GR L GT Y+ P I + + D +
Sbjct: 166 RDLKPENLMIDQQGYIKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 224 ALGVLIYEMAAGYPP 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V SG A+K+L K+ + E +L ++ LV L
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+++ G + + + R R A I EYLH +I+
Sbjct: 110 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 165
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 224 ALGVLIYEMAAGYPP 238
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V SG A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+++ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V SG A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+++ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 112/265 (42%), Gaps = 38/265 (14%)
Query: 145 AIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYM-LIYEFMSNGSLSNL 203
A+KV+ +E + LL H N++ L D GK++ L+ E M G L +
Sbjct: 56 AVKVIDKSKRDPSEEIEI---LLRYGQHPNIITLKD-VYDDGKHVYLVTELMRGGELLDK 111
Query: 204 IYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANIL-LDHFMRA---KVA 259
I ++ + E + I +EYLH V +HRDLK +NIL +D ++
Sbjct: 112 IL-RQKFFSEREASFVLHTIGKTVEYLHSQGV---VHRDLKPSNILYVDESGNPECLRIC 167
Query: 260 DFGLSKEEVFDGRNSGLKG---TYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPH 316
DFG +K+ N L T ++ P + + DI+S G++++ ++
Sbjct: 168 DFGFAKQ--LRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG---- 221
Query: 317 QNLMEYVNLASMSQDGVDEILD-----KQLVGACNIQEVRELAR-IGHKCLHKTPRKRPS 370
Y A+ D +EIL K + N V E A+ + K LH P +R +
Sbjct: 222 -----YTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLT 276
Query: 371 IGEVTQALL-----KIKQRHLAKQD 390
+V Q K+ Q L+ QD
Sbjct: 277 AKQVLQHPWVTQKDKLPQSQLSHQD 301
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V SG A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+++ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V SG A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+++ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 113/234 (48%), Gaps = 25/234 (10%)
Query: 121 FTNI--LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLV 176
+TN+ +G+GA+G V A V AIK ++ HQ + E+ +L H N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 177 NL----IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+ +++ K + I + + L L+ ++ L+ + I G++Y+H
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH--LSNDHICYFLYQILRGLKYIHS 144
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY----GYIDPAYI 288
V +HRDLK +N+LL+ K+ DFGL++ D ++G Y Y P +
Sbjct: 145 ANV---LHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 289 STNK-FTMKSDIFSFGVIIFELIT--AIHPHQNLMEYVN-----LASMSQDGVD 334
+K +T DI+S G I+ E+++ I P ++ ++ +N L S SQ+ ++
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 255
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 124 ILGQGAFGPVYKA-TMPSGGVAAIKVLASDS---HQGEKEFQTEVSLLGRLHHRN--LVN 177
I+G+G FG VY +G + A+K L QGE E +L + + +
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 178 LIGYCV-DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVP 236
+ Y K I + M+ G L + S+ V + + A +I G+E++H V
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFYAAEIILGLEHMHNRFV- 313
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTN-KFTM 295
++RDLK ANILLD +++D GL+ + ++ + GT+GY+ P + +
Sbjct: 314 --VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKGVAYDS 370
Query: 296 KSDIFSFGVIIFELITAIHP 315
+D FS G ++F+L+ P
Sbjct: 371 SADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 124 ILGQGAFGPVYKA-TMPSGGVAAIKVLASDS---HQGEKEFQTEVSLLGRLHHRN--LVN 177
I+G+G FG VY +G + A+K L QGE E +L + + +
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 178 LIGYCV-DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVP 236
+ Y K I + M+ G L + S+ V + + A +I G+E++H V
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFYAAEIILGLEHMHNRFV- 313
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTN-KFTM 295
++RDLK ANILLD +++D GL+ + ++ + GT+GY+ P + +
Sbjct: 314 --VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKGVAYDS 370
Query: 296 KSDIFSFGVIIFELITAIHP 315
+D FS G ++F+L+ P
Sbjct: 371 SADWFSLGCMLFKLLRGHSP 390
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V M +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+++D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLMIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 12/203 (5%)
Query: 120 NFTNILGQGAFGPVYKAT--MPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVN 177
+ LG+GA G V A + VA V + + + E+ + L+H N+V
Sbjct: 9 DLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 178 LIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL-DISHGIEYLHEGAVP 236
G+ + L E+ S G L + I E + E Q + G+ YLH +
Sbjct: 69 FYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGI- 125
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLK---GTYGYIDPAYISTNKF 293
HRD+K N+LLD K++DFGL+ ++ R L GT Y+ P + +F
Sbjct: 126 --THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 294 TMKS-DIFSFGVIIFELITAIHP 315
+ D++S G+++ ++ P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 124 ILGQGAFGPVYKA-TMPSGGVAAIKVLASDS---HQGEKEFQTEVSLLGRLHHRN--LVN 177
I+G+G FG VY +G + A+K L QGE E +L + + +
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 178 LIGYCV-DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVP 236
+ Y K I + M+ G L + S+ V + + A +I G+E++H V
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFYAAEIILGLEHMHNRFV- 313
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTN-KFTM 295
++RDLK ANILLD +++D GL+ + ++ + GT+GY+ P + +
Sbjct: 314 --VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKGVAYDS 370
Query: 296 KSDIFSFGVIIFELITAIHP 315
+D FS G ++F+L+ P
Sbjct: 371 SADWFSLGCMLFKLLRGHSP 390
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 13/200 (6%)
Query: 124 ILGQGAFGPVYKA-TMPSGGVAAIKVLASDS---HQGEKEFQTEVSLLGRLHHRN--LVN 177
I+G+G FG VY +G + A+K L QGE E +L + + +
Sbjct: 195 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 254
Query: 178 LIGYCV-DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVP 236
+ Y K I + M+ G L + S+ V + + A +I G+E++H V
Sbjct: 255 CMSYAFHTPDKLSFILDLMNGGDLHYHL-SQHGVFSEADMRFYAAEIILGLEHMHNRFV- 312
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTN-KFTM 295
++RDLK ANILLD +++D GL+ + ++ + GT+GY+ P + +
Sbjct: 313 --VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKGVAYDS 369
Query: 296 KSDIFSFGVIIFELITAIHP 315
+D FS G ++F+L+ P
Sbjct: 370 SADWFSLGCMLFKLLRGHSP 389
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 112/265 (42%), Gaps = 38/265 (14%)
Query: 145 AIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYM-LIYEFMSNGSLSNL 203
A+KV+ +E + LL H N++ L D GK++ L+ E M G L +
Sbjct: 56 AVKVIDKSKRDPSEEIEI---LLRYGQHPNIITLKD-VYDDGKHVYLVTELMRGGELLDK 111
Query: 204 IYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANIL-LDHFMRA---KVA 259
I ++ + E + I +EYLH V +HRDLK +NIL +D ++
Sbjct: 112 IL-RQKFFSEREASFVLHTIGKTVEYLHSQGV---VHRDLKPSNILYVDESGNPECLRIC 167
Query: 260 DFGLSKEEVFDGRNSGLKG---TYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPH 316
DFG +K+ N L T ++ P + + DI+S G++++ ++
Sbjct: 168 DFGFAKQ--LRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG---- 221
Query: 317 QNLMEYVNLASMSQDGVDEILD-----KQLVGACNIQEVRELAR-IGHKCLHKTPRKRPS 370
Y A+ D +EIL K + N V E A+ + K LH P +R +
Sbjct: 222 -----YTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLT 276
Query: 371 IGEVTQALL-----KIKQRHLAKQD 390
+V Q K+ Q L+ QD
Sbjct: 277 AKQVLQHPWVTQKDKLPQSQLSHQD 301
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 123 NILGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLH-HRNLVNLIG 180
++LG+GA V + + A+K++ EV +L + HRN++ LI
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIE 78
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
+ ++ ++ L++E M GS+ + I+ + R N E + D++ +++LH + H
Sbjct: 79 FFEEEDRFYLVFEKMRGGSILSHIH-KRRHFNELEASVVVQDVASALDFLHNKG---IAH 134
Query: 241 RDLKSANILLDH---FMRAKVADFGLSKEEVFDGRNSGLK--------GTYGYIDPAYI- 288
RDLK NIL +H K+ DF L +G S + G+ Y+ P +
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVE 194
Query: 289 ----STNKFTMKSDIFSFGVIIFELITAIHP 315
+ + + D++S GVI++ L++ P
Sbjct: 195 AFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 97/228 (42%), Gaps = 40/228 (17%)
Query: 124 ILGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLH-HRNLVNLIGY 181
+L +G F VY+A + SG A+K L S+ + + EV + +L H N+V
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 182 C--------VDKGKYMLIYEFMSNGSLSNLIYSEER-VLNWEERLQIALDISHGIEYLHE 232
+ +++L+ E + L E R L+ + L+I ++++H
Sbjct: 95 ASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR 154
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFG-------------------LSKEEVFDGRN 273
PP+IHRDLK N+LL + K+ DFG L +EE+ RN
Sbjct: 155 QK-PPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEI--TRN 211
Query: 274 SGLKGTYGYIDPAYI---STNKFTMKSDIFSFGVIIFELITAIHPHQN 318
+ T Y P I S K DI++ G I++ L HP ++
Sbjct: 212 T----TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED 255
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V M +G A+K+L K+ + E +L ++ L L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+ G + + + R R A I EYLH +I+
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 165
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+++D KV DFG +K GR L GT Y+ P I + + D +
Sbjct: 166 RDLKPENLMIDQQGYIKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 224 ALGVLIYEMAAGYPP 238
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 124 ILGQGAFGPV----YKATMPSGGVAAIKVLASDSHQGE--KEFQ----TEVSLLGRLH-H 172
ILG+G V +K T V I V S E +E + EV +L ++ H
Sbjct: 24 ILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH 83
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
N++ L + L+++ M G L + + +E+ L+ +E +I + I LH+
Sbjct: 84 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALLEVICALHK 142
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNK 292
+ +HRDLK NILLD M K+ DFG S + + + GT Y+ P I +
Sbjct: 143 LNI---VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSM 199
Query: 293 ------FTMKSDIFSFGVIIFELITAIHP 315
+ + D++S GVI++ L+ P
Sbjct: 200 NDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V SG A+K+L K+ + E +L ++ LV L
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 95
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+++ G + + + R R A I EYLH +I+
Sbjct: 96 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 151
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 152 RDLKPENLLIDEQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 209
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 210 ALGVLIYEMAAGYPP 224
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V M +G A+K+L K+ + E +L ++ L L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+ G + + + R R A I EYLH +I+
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 165
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+++D KV DFG +K GR L GT Y+ P I + + D +
Sbjct: 166 RDLKPENLMIDQQGYIKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 224 ALGVLIYEMAAGYPP 238
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 23/210 (10%)
Query: 124 ILGQGAFGPV----YKATMPSGGVAAIKVLASDSHQGEKEFQ-------TEVSLLGRLH- 171
ILG+G V +K T V I V S E E Q EV +L ++
Sbjct: 11 ILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAE-EVQELREATLKEVDILRKVSG 69
Query: 172 HRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLH 231
H N++ L + L+++ M G L + + +E+ L+ +E +I + I LH
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALLEVICALH 128
Query: 232 EGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTN 291
+ + +HRDLK NILLD M K+ DFG S + + + GT Y+ P I +
Sbjct: 129 KLNI---VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECS 185
Query: 292 K------FTMKSDIFSFGVIIFELITAIHP 315
+ + D++S GVI++ L+ P
Sbjct: 186 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 21/204 (10%)
Query: 125 LGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQT---EVSLLGRLHHRNLVNLIG 180
+G+G+FG V + + A+K + E + E+ ++ L H LVNL
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 181 YCVDKGKYMLIYEFMSNGSL-----SNLIYSEERVLNWEERLQIALDISHGIEYLHEGAV 235
D+ ++ + + G L N+ + EE V + L +ALD YL +
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALD------YLQNQRI 136
Query: 236 PPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNK--- 292
IHRD+K NILLD + DF ++ + + + + GT Y+ P S+ K
Sbjct: 137 ---IHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAG 193
Query: 293 FTMKSDIFSFGVIIFELITAIHPH 316
++ D +S GV +EL+ P+
Sbjct: 194 YSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 40/256 (15%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHR 173
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q ++ +L H
Sbjct: 52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHC 107
Query: 174 NLVNLIGYCVDKG-KYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISH------- 225
N+V L + G K +Y + + +Y RV R + L + +
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY---RVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 226 ---GIEYLHEGAVPPVIHRDLKSANILLDHFMRA-KVADFGLSKEEVFDGRNSGLKGTYG 281
+ Y+H + HRD+K N+LLD K+ DFG +K+ V N +
Sbjct: 165 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 221
Query: 282 YIDPAYI-STNKFTMKSDIFSFGVIIFELI--TAIHPHQNLMEYVNLASMSQDGVDEILD 338
Y P I +T D++S G ++ EL+ I P GVD++++
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP-------------GDSGVDQLVE 268
Query: 339 -KQLVGACNIQEVREL 353
+++G +++RE+
Sbjct: 269 IIKVLGTPTREQIREM 284
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 40/256 (15%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHR 173
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q ++ +L H
Sbjct: 46 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHC 101
Query: 174 NLVNLIGYCVDKG-KYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISH------- 225
N+V L + G K +Y + + +Y RV R + L + +
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY---RVARHYSRAKQTLPVIYVKLYMYQ 158
Query: 226 ---GIEYLHEGAVPPVIHRDLKSANILLDHFMRA-KVADFGLSKEEVFDGRNSGLKGTYG 281
+ Y+H + HRD+K N+LLD K+ DFG +K+ V N +
Sbjct: 159 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 215
Query: 282 YIDPAYI-STNKFTMKSDIFSFGVIIFELI--TAIHPHQNLMEYVNLASMSQDGVDEILD 338
Y P I +T D++S G ++ EL+ I P GVD++++
Sbjct: 216 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP-------------GDSGVDQLVE 262
Query: 339 -KQLVGACNIQEVREL 353
+++G +++RE+
Sbjct: 263 IIKVLGTPTREQIREM 278
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 111/255 (43%), Gaps = 38/255 (14%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHR 173
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q ++ +L H
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHC 73
Query: 174 NLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISH-------- 225
N+V L + G+ E N L + + RV R + L + +
Sbjct: 74 NIVRLRYFFYSSGEKK--DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 226 --GIEYLHEGAVPPVIHRDLKSANILLDHFMRA-KVADFGLSKEEVFDGRNSGLKGTYGY 282
+ Y+H + HRD+K N+LLD K+ DFG +K+ V N + Y
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 188
Query: 283 IDPAYI-STNKFTMKSDIFSFGVIIFELI--TAIHPHQNLMEYVNLASMSQDGVDEILD- 338
P I +T D++S G ++ EL+ I P GVD++++
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP-------------GDSGVDQLVEI 235
Query: 339 KQLVGACNIQEVREL 353
+++G +++RE+
Sbjct: 236 IKVLGTPTREQIREM 250
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 40/256 (15%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHR 173
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q ++ +L H
Sbjct: 54 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHC 109
Query: 174 NLVNLIGYCVDKG-KYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISH------- 225
N+V L + G K +Y + + +Y RV R + L + +
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY---RVARHYSRAKQTLPVIYVKLYMYQ 166
Query: 226 ---GIEYLHEGAVPPVIHRDLKSANILLDHFMRA-KVADFGLSKEEVFDGRNSGLKGTYG 281
+ Y+H + HRD+K N+LLD K+ DFG +K+ V N +
Sbjct: 167 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 223
Query: 282 YIDPAYI-STNKFTMKSDIFSFGVIIFELI--TAIHPHQNLMEYVNLASMSQDGVDEILD 338
Y P I +T D++S G ++ EL+ I P GVD++++
Sbjct: 224 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP-------------GDSGVDQLVE 270
Query: 339 -KQLVGACNIQEVREL 353
+++G +++RE+
Sbjct: 271 IIKVLGTPTREQIREM 286
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 40/256 (15%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHR 173
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q ++ +L H
Sbjct: 30 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHC 85
Query: 174 NLVNLIGYCVDKG-KYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISH------- 225
N+V L + G K +Y + + +Y RV R + L + +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY---RVARHYSRAKQTLPVIYVKLYMYQ 142
Query: 226 ---GIEYLHEGAVPPVIHRDLKSANILLDHFMRA-KVADFGLSKEEVFDGRNSGLKGTYG 281
+ Y+H + HRD+K N+LLD K+ DFG +K+ V N +
Sbjct: 143 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 199
Query: 282 YIDPAYI-STNKFTMKSDIFSFGVIIFELI--TAIHPHQNLMEYVNLASMSQDGVDEILD 338
Y P I +T D++S G ++ EL+ I P GVD++++
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP-------------GDSGVDQLVE 246
Query: 339 -KQLVGACNIQEVREL 353
+++G +++RE+
Sbjct: 247 IIKVLGTPTREQIREM 262
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 40/256 (15%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHR 173
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q ++ +L H
Sbjct: 52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHC 107
Query: 174 NLVNLIGYCVDKG-KYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISH------- 225
N+V L + G K +Y + + +Y RV R + L + +
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY---RVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 226 ---GIEYLHEGAVPPVIHRDLKSANILLDHFMRA-KVADFGLSKEEVFDGRNSGLKGTYG 281
+ Y+H + HRD+K N+LLD K+ DFG +K+ V N +
Sbjct: 165 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 221
Query: 282 YIDPAYI-STNKFTMKSDIFSFGVIIFELI--TAIHPHQNLMEYVNLASMSQDGVDEILD 338
Y P I +T D++S G ++ EL+ I P GVD++++
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP-------------GDSGVDQLVE 268
Query: 339 -KQLVGACNIQEVREL 353
+++G +++RE+
Sbjct: 269 IIKVLGTPTREQIREM 284
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 85/196 (43%), Gaps = 9/196 (4%)
Query: 125 LGQGAFGPVYKATMPSGG--VAAIKVLASDSHQG-EKEFQTEVSLLGRLHHRNLVNLIGY 181
+G+G +G V+KA VA +V D +G E+ LL L H+N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 182 CVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHR 241
K L++EF + L S L+ E + G+ + H V +HR
Sbjct: 70 LHSDKKLTLVFEF-CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV---LHR 125
Query: 242 DLKSANILLDHFMRAKVADFGLSKEEVFDGRN-SGLKGTYGYIDPAYISTNK-FTMKSDI 299
DLK N+L++ K+ADFGL++ R S T Y P + K ++ D+
Sbjct: 126 DLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDM 185
Query: 300 FSFGVIIFELITAIHP 315
+S G I EL A P
Sbjct: 186 WSAGCIFAELANAARP 201
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V +G A+K+L K+ + E +L ++ LV L
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E++ G + + + R R A I EYLH + I+
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLHSLDL---IY 157
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 158 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 215
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 216 ALGVLIYEMAAGYPP 230
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V SG A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+++ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+++D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLIIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIIISKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 111/255 (43%), Gaps = 38/255 (14%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHR 173
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q ++ +L H
Sbjct: 19 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHC 74
Query: 174 NLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISH-------- 225
N+V L + G+ E N L + + RV R + L + +
Sbjct: 75 NIVRLRYFFYSSGEKK--DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 132
Query: 226 --GIEYLHEGAVPPVIHRDLKSANILLDHFMRA-KVADFGLSKEEVFDGRNSGLKGTYGY 282
+ Y+H + HRD+K N+LLD K+ DFG +K+ V N + Y
Sbjct: 133 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 189
Query: 283 IDPAYI-STNKFTMKSDIFSFGVIIFELI--TAIHPHQNLMEYVNLASMSQDGVDEILD- 338
P I +T D++S G ++ EL+ I P GVD++++
Sbjct: 190 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP-------------GDSGVDQLVEI 236
Query: 339 KQLVGACNIQEVREL 353
+++G +++RE+
Sbjct: 237 IKVLGTPTREQIREM 251
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 111/255 (43%), Gaps = 38/255 (14%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHR 173
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q ++ +L H
Sbjct: 26 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHC 81
Query: 174 NLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISH-------- 225
N+V L + G+ E N L + + RV R + L + +
Sbjct: 82 NIVRLRYFFYSSGEKK--DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 139
Query: 226 --GIEYLHEGAVPPVIHRDLKSANILLDHFMRA-KVADFGLSKEEVFDGRNSGLKGTYGY 282
+ Y+H + HRD+K N+LLD K+ DFG +K+ V N + Y
Sbjct: 140 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 196
Query: 283 IDPAYI-STNKFTMKSDIFSFGVIIFELI--TAIHPHQNLMEYVNLASMSQDGVDEILD- 338
P I +T D++S G ++ EL+ I P GVD++++
Sbjct: 197 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP-------------GDSGVDQLVEI 243
Query: 339 KQLVGACNIQEVREL 353
+++G +++RE+
Sbjct: 244 IKVLGTPTREQIREM 258
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 111/255 (43%), Gaps = 38/255 (14%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHR 173
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q ++ +L H
Sbjct: 37 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHC 92
Query: 174 NLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISH-------- 225
N+V L + G+ E N L + + RV R + L + +
Sbjct: 93 NIVRLRYFFYSSGEKK--DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 150
Query: 226 --GIEYLHEGAVPPVIHRDLKSANILLDHFMRA-KVADFGLSKEEVFDGRNSGLKGTYGY 282
+ Y+H + HRD+K N+LLD K+ DFG +K+ V N + Y
Sbjct: 151 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 207
Query: 283 IDPAYI-STNKFTMKSDIFSFGVIIFELI--TAIHPHQNLMEYVNLASMSQDGVDEILD- 338
P I +T D++S G ++ EL+ I P GVD++++
Sbjct: 208 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP-------------GDSGVDQLVEI 254
Query: 339 KQLVGACNIQEVREL 353
+++G +++RE+
Sbjct: 255 IKVLGTPTREQIREM 269
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 40/256 (15%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHR 173
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q ++ +L H
Sbjct: 56 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHC 111
Query: 174 NLVNLIGYCVDKG-KYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISH------- 225
N+V L + G K +Y + + +Y RV R + L + +
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY---RVARHYSRAKQTLPVIYVKLYMYQ 168
Query: 226 ---GIEYLHEGAVPPVIHRDLKSANILLDHFMRA-KVADFGLSKEEVFDGRNSGLKGTYG 281
+ Y+H + HRD+K N+LLD K+ DFG +K+ V N +
Sbjct: 169 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 225
Query: 282 YIDPAYI-STNKFTMKSDIFSFGVIIFELI--TAIHPHQNLMEYVNLASMSQDGVDEILD 338
Y P I +T D++S G ++ EL+ I P GVD++++
Sbjct: 226 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP-------------GDSGVDQLVE 272
Query: 339 -KQLVGACNIQEVREL 353
+++G +++RE+
Sbjct: 273 IIKVLGTPTREQIREM 288
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 40/256 (15%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHR 173
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q ++ +L H
Sbjct: 31 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHC 86
Query: 174 NLVNLIGYCVDKG-KYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISH------- 225
N+V L + G K +Y + + +Y RV R + L + +
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY---RVARHYSRAKQTLPVIYVKLYMYQ 143
Query: 226 ---GIEYLHEGAVPPVIHRDLKSANILLDHFMRA-KVADFGLSKEEVFDGRNSGLKGTYG 281
+ Y+H + HRD+K N+LLD K+ DFG +K+ V N +
Sbjct: 144 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 200
Query: 282 YIDPAYI-STNKFTMKSDIFSFGVIIFELI--TAIHPHQNLMEYVNLASMSQDGVDEILD 338
Y P I +T D++S G ++ EL+ I P GVD++++
Sbjct: 201 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP-------------GDSGVDQLVE 247
Query: 339 -KQLVGACNIQEVREL 353
+++G +++RE+
Sbjct: 248 IIKVLGTPTREQIREM 263
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 111/255 (43%), Gaps = 38/255 (14%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHR 173
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q ++ +L H
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHC 73
Query: 174 NLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISH-------- 225
N+V L + G+ E N L + + RV R + L + +
Sbjct: 74 NIVRLRYFFYSSGEKK--DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 226 --GIEYLHEGAVPPVIHRDLKSANILLDHFMRA-KVADFGLSKEEVFDGRNSGLKGTYGY 282
+ Y+H + HRD+K N+LLD K+ DFG +K+ V N + Y
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 188
Query: 283 IDPAYI-STNKFTMKSDIFSFGVIIFELI--TAIHPHQNLMEYVNLASMSQDGVDEILD- 338
P I +T D++S G ++ EL+ I P GVD++++
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP-------------GDSGVDQLVEI 235
Query: 339 KQLVGACNIQEVREL 353
+++G +++RE+
Sbjct: 236 IKVLGTPTREQIREM 250
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 111/255 (43%), Gaps = 38/255 (14%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHR 173
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q ++ +L H
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHC 73
Query: 174 NLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISH-------- 225
N+V L + G+ E N L + + RV R + L + +
Sbjct: 74 NIVRLRYFFYSSGEKK--DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 226 --GIEYLHEGAVPPVIHRDLKSANILLDHFMRA-KVADFGLSKEEVFDGRNSGLKGTYGY 282
+ Y+H + HRD+K N+LLD K+ DFG +K+ V N + Y
Sbjct: 132 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 188
Query: 283 IDPAYI-STNKFTMKSDIFSFGVIIFELI--TAIHPHQNLMEYVNLASMSQDGVDEILD- 338
P I +T D++S G ++ EL+ I P GVD++++
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP-------------GDSGVDQLVEI 235
Query: 339 KQLVGACNIQEVREL 353
+++G +++RE+
Sbjct: 236 IKVLGTPTREQIREM 250
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A +G A+K L+ S K E+ L
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 127
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 128 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMAGFVATR 182
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 111/232 (47%), Gaps = 23/232 (9%)
Query: 125 LGQGAFGPVYKA-TMPSGGVAAIKVLASDSHQGE-KEFQTEVSLLGRLHHRNLVN----L 178
+G+GA+G V A AIK ++ HQ + E+ +L R H N++ L
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 179 IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPV 238
++ + + I + + L L+ S++ L+ + I G++Y+H V
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKLLKSQQ--LSNDHICYFLYQILRGLKYIHSANV--- 165
Query: 239 IHRDLKSANILLDHFMRAKVADFGLSK----EEVFDGRNSGLKGTYGYIDPAYISTNK-F 293
+HRDLK +N+L++ K+ DFGL++ E G + T Y P + +K +
Sbjct: 166 LHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGY 225
Query: 294 TMKSDIFSFGVIIFELIT--AIHPHQNLMEYVN-----LASMSQDGVDEILD 338
T DI+S G I+ E+++ I P ++ ++ +N L S SQ+ ++ I++
Sbjct: 226 TKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 277
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A +G A+K L+ S K E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 131
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 132 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMAGFVATR 186
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 110/261 (42%), Gaps = 25/261 (9%)
Query: 125 LGQGAFGPVYKA--TMPSGGVAAIKVLASDSHQGEKE-FQTEVSLLGRLHHRNLVNLIGY 181
+G+G+F VYK T + VA ++ + E++ F+ E L L H N+V
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 182 --CVDKGK--YMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
KGK +L+ E ++G+L + +V + I G+++LH PP
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYL-KRFKVXKIKVLRSWCRQILKGLQFLH-TRTPP 151
Query: 238 VIHRDLKSANILLDHFM-RAKVADFGLS--KEEVFDGRNSGLKGTYGYIDPAYISTNKFT 294
+IHRDLK NI + K+ D GL+ K F + GT + P K+
Sbjct: 152 IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF---AKAVIGTPEFXAPEXYE-EKYD 207
Query: 295 MKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEI-LDKQLVGACNIQEVREL 353
D+++FG E T+ +P+ + GV DK I EV+E
Sbjct: 208 ESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDK-----VAIPEVKE- 261
Query: 354 ARIGHKCLHKTPRKRPSIGEV 374
I C+ + +R SI ++
Sbjct: 262 --IIEGCIRQNKDERYSIKDL 280
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 108/272 (39%), Gaps = 31/272 (11%)
Query: 121 FTNILGQGAFGPV-YKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLI 179
F LG+G F V + G A+K + Q +E Q E + +H N++ L+
Sbjct: 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLV 92
Query: 180 GYCVD----KGKYMLIYEFMSNGSLSNLI---YSEERVLNWEERLQIALDISHGIEYLHE 232
YC+ K + L+ F G+L N I + L ++ L + L I G+E +H
Sbjct: 93 AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA 152
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVF--DGRNSGL--------KGTYGY 282
HRDLK NILL + + D G + +G L + T Y
Sbjct: 153 KG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISY 209
Query: 283 IDPAYISTNKFTM---KSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDK 339
P S + ++D++S G +++ ++ P+ ++ D V +
Sbjct: 210 RAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY-------DMVFQKGDSVALAVQN 262
Query: 340 QLVGACNIQEVRELARIGHKCLHKTPRKRPSI 371
QL + + L ++ + + P +RP I
Sbjct: 263 QLSIPQSPRHSSALWQLLNSMMTVDPHQRPHI 294
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 85/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V SG A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+++ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+++ P
Sbjct: 223 ALGVLIYQMAAGYPP 237
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A +G A+K L+ S K E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 131
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 132 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMAGFVATR 186
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 40/256 (15%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHR 173
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q ++ +L H
Sbjct: 30 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHC 85
Query: 174 NLVNLIGYCVDKG-KYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISH------- 225
N+V L + G K +Y + + +Y RV R + L + +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY---RVARHYSRAKQTLPVIYVKLYMYQ 142
Query: 226 ---GIEYLHEGAVPPVIHRDLKSANILLDHFMRA-KVADFGLSKEEVFDGRNSGLKGTYG 281
+ Y+H + HRD+K N+LLD K+ DFG +K+ V N +
Sbjct: 143 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 199
Query: 282 YIDPAYI-STNKFTMKSDIFSFGVIIFELI--TAIHPHQNLMEYVNLASMSQDGVDEILD 338
Y P I +T D++S G ++ EL+ I P GVD++++
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP-------------GDSGVDQLVE 246
Query: 339 -KQLVGACNIQEVREL 353
+++G +++RE+
Sbjct: 247 IIKVLGTPTREQIREM 262
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 111/255 (43%), Gaps = 38/255 (14%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHR 173
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q ++ +L H
Sbjct: 22 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHC 77
Query: 174 NLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISH-------- 225
N+V L + G+ E N L + + RV R + L + +
Sbjct: 78 NIVRLRYFFYSSGEKK--DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 135
Query: 226 --GIEYLHEGAVPPVIHRDLKSANILLDHFMRA-KVADFGLSKEEVFDGRNSGLKGTYGY 282
+ Y+H + HRD+K N+LLD K+ DFG +K+ V N + Y
Sbjct: 136 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYY 192
Query: 283 IDPAYI-STNKFTMKSDIFSFGVIIFELI--TAIHPHQNLMEYVNLASMSQDGVDEILD- 338
P I +T D++S G ++ EL+ I P GVD++++
Sbjct: 193 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP-------------GDSGVDQLVEI 239
Query: 339 KQLVGACNIQEVREL 353
+++G +++RE+
Sbjct: 240 IKVLGTPTREQIREM 254
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 111/255 (43%), Gaps = 38/255 (14%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHR 173
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q ++ +L H
Sbjct: 23 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHC 78
Query: 174 NLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISH-------- 225
N+V L + G+ E N L + + RV R + L + +
Sbjct: 79 NIVRLRYFFYSSGEKK--DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 136
Query: 226 --GIEYLHEGAVPPVIHRDLKSANILLDHFMRA-KVADFGLSKEEVFDGRNSGLKGTYGY 282
+ Y+H + HRD+K N+LLD K+ DFG +K+ V N + Y
Sbjct: 137 FRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY 193
Query: 283 IDPAYI-STNKFTMKSDIFSFGVIIFELI--TAIHPHQNLMEYVNLASMSQDGVDEILD- 338
P I +T D++S G ++ EL+ I P GVD++++
Sbjct: 194 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP-------------GDSGVDQLVEI 240
Query: 339 KQLVGACNIQEVREL 353
+++G +++RE+
Sbjct: 241 IKVLGTPTREQIREM 255
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 118/290 (40%), Gaps = 48/290 (16%)
Query: 145 AIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYM-LIYEFMSNGSLSNL 203
A+K++ +E + LL H N++ L D GKY+ ++ E G L +
Sbjct: 51 AVKIIDKSKRDPTEEIEI---LLRYGQHPNIITLKD-VYDDGKYVYVVTELXKGGELLDK 106
Query: 204 IYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILL----DHFMRAKVA 259
I ++ + E + I+ +EYLH V +HRDLK +NIL + ++
Sbjct: 107 IL-RQKFFSEREASAVLFTITKTVEYLHAQGV---VHRDLKPSNILYVDESGNPESIRIC 162
Query: 260 DFGLSKEEVFDGRNSGLKG---TYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHPH 316
DFG +K+ N L T ++ P + + DI+S GV+++ +T
Sbjct: 163 DFGFAKQ--LRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG---- 216
Query: 317 QNLMEYVNLASMSQDGVDEILDKQLVGACNI-----QEVRELAR-IGHKCLHKTPRKRPS 370
Y A+ D +EIL + G ++ V + A+ + K LH P +R
Sbjct: 217 -----YTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQR-- 269
Query: 371 IGEVTQALL----------KIKQRHLAKQDTMSFADGEFSRAVSRIEDQQ 410
+T AL+ ++ Q L +QD G + S + Q
Sbjct: 270 ---LTAALVLRHPWIVHWDQLPQYQLNRQDAPHLVKGAXAATYSALNRNQ 316
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 112/256 (43%), Gaps = 40/256 (15%)
Query: 115 QKATQNFTNILGQGAFGPVYKATM-PSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHR 173
Q+ + T ++G G+FG VY+A + SG + AIK + D +E Q ++ +L H
Sbjct: 97 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ----IMRKLDHC 152
Query: 174 NLVNLIGYCVDKG-KYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISH------- 225
N+V L + G K +Y + + +Y RV R + L + +
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY---RVARHYSRAKQTLPVIYVKLYMYQ 209
Query: 226 ---GIEYLHEGAVPPVIHRDLKSANILLDHFMRA-KVADFGLSKEEVFDGRNSGLKGTYG 281
+ Y+H + HRD+K N+LLD K+ DFG +K+ V N +
Sbjct: 210 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 266
Query: 282 YIDPAYI-STNKFTMKSDIFSFGVIIFELI--TAIHPHQNLMEYVNLASMSQDGVDEILD 338
Y P I +T D++S G ++ EL+ I P GVD++++
Sbjct: 267 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP-------------GDSGVDQLVE 313
Query: 339 -KQLVGACNIQEVREL 353
+++G +++RE+
Sbjct: 314 IIKVLGTPTREQIREM 329
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 16/168 (9%)
Query: 159 EFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVL---NWEE 215
+F+ E+ ++ + + + G + + +IYE+M N S+ L + E + N+
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSI--LKFDEYFFVLDKNYTC 146
Query: 216 RLQIAL------DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVF 269
+ I + + + Y+H + HRD+K +NIL+D R K++DFG S E +
Sbjct: 147 FIPIQVIKCIIKSVLNSFSYIHNEK--NICHRDVKPSNILMDKNGRVKLSDFGES-EYMV 203
Query: 270 DGRNSGLKGTYGYIDPAYISTNKFT--MKSDIFSFGVIIFELITAIHP 315
D + G +GTY ++ P + S K DI+S G+ ++ + + P
Sbjct: 204 DKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ S++ ++ +Q +
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLT---DDHVQFLI 131
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL + D +G T
Sbjct: 132 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDSELKILDFGLCRHT--DDEMTGYVATR 186
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A +G A+K L+ S K E+ L
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 137
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 138 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 192
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V +G A+K+L K+ + E +L ++ LV L
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E++ G + + + R R A I EYLH +I+
Sbjct: 130 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 185
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 186 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 243
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 244 ALGVLIYEMAAGYPP 258
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 125 LGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEKEFQTEVSLLGRLH-HRNLVNLIGYC 182
LG+G+F K A A+K++ S + E Q E++ L H N+V L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKII---SKRMEANTQKEITALKLCEGHPNIVKLHEVF 75
Query: 183 VDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRD 242
D+ L+ E ++ G L I +++ + E I + + ++H+ V +HRD
Sbjct: 76 HDQLHTFLVMELLNGGELFERI-KKKKHFSETEASYIMRKLVSAVSHMHDVGV---VHRD 131
Query: 243 LKSANILL---DHFMRAKVADFGLSKEEVFDGRNSGLKG---TYGYIDPAYISTNKFTMK 296
LK N+L + + K+ DFG ++ + D N LK T Y P ++ N +
Sbjct: 132 LKPENLLFTDENDNLEIKIIDFGFARLKPPD--NQPLKTPCFTLHYAAPELLNQNGYDES 189
Query: 297 SDIFSFGVIIFELITAIHPHQN 318
D++S GVI++ +++ P Q+
Sbjct: 190 CDLWSLGVILYTMLSGQVPFQS 211
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A +G A+K L+ S K E+ L
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 127
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 128 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 182
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A +G A+K L+ S K E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 131
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 132 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 186
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 131
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 132 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 186
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 187 WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLT 218
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V +G A+K+L K+ + E +L ++ LV L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E++ G + + + R R A I EYLH +I+
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 165
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 224 ALGVLIYEMAAGYPP 238
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A +G A+K L+ S K E+ L
Sbjct: 25 KTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 84
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 85 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 141
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 142 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 196
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 197 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 228
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V +G A+K+L K+ + E +L ++ LV L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E++ G + + + R R A I EYLH +I+
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 165
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 224 ALGVLIYEMAAGYPP 238
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 86/197 (43%), Gaps = 14/197 (7%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQTEVSLLGR-----LHHRNLVNL 178
LG G+FG V +G A+K+L D + K Q E +L + ++ LV L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKIL--DKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKL 107
Query: 179 IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPV 238
D ++ E+ G + + + R R A I EYLH +
Sbjct: 108 EFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDL 163
Query: 239 IHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSD 298
I+RDLK N+L+D KVADFG +K GR L GT Y+ P I + + D
Sbjct: 164 IYRDLKPENLLIDQQGYIKVADFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVD 221
Query: 299 IFSFGVIIFELITAIHP 315
++ GV+I+E+ P
Sbjct: 222 WWALGVLIYEMAAGYPP 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V +G A+K+L K+ + E +L ++ LV L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+ G + + + R R A I EYLH +I+
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 165
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+++D KV DFG +K GR L GT Y+ P I + + D +
Sbjct: 166 RDLKPENLMIDQQGYIKVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 224 ALGVLIYEMAAGYPP 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V +G A+K+L K+ + E +L ++ LV L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E++ G + + + R R A I EYLH +I+
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 165
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 223
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 224 ALGVLIYEMAAGYPP 238
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A +G A+K L+ S K E+ L
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 151
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 152 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 206
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V +G A+K+L K+ + E +L ++ LV L
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E++ G + + + R R A I EYLH + I+
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHSLDL---IY 157
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 158 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 215
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 216 ALGVLIYEMAAGYPP 230
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 131
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 132 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 186
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A +G A+K L+ S K E+ L
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 93
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 150
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 151 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 205
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 206 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 137
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 138 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 192
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 20 KTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 136
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 137 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDXELKILDFGLARHT--DDEMTGYVATR 191
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E++ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E++ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 127
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 128 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 182
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V +G A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E++ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT Y+ P I + + D +
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 136
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 137 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 191
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 131
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 132 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 186
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 120/275 (43%), Gaps = 39/275 (14%)
Query: 116 KATQNFTNILGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGEKEFQT------EVSLLG 168
+A +LG+G FG V+ + + AIKV+ + G EV+LL
Sbjct: 30 EAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLW 89
Query: 169 RLH----HRNLVNLIGYCVDKGKYMLIYE-FMSNGSLSNLIYSEERVLNWEERLQIALDI 223
++ H ++ L+ + + +ML+ E + L + I + + R +
Sbjct: 90 KVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFG-QV 148
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMR---AKVADFGLSKEEVFDGRNSGLKGTY 280
I++ H V +HRD+K NIL+D +R AK+ DFG S + D + GT
Sbjct: 149 VAAIQHCHSRGV---VHRDIKDENILID--LRRGCAKLIDFG-SGALLHDEPYTDFDGTR 202
Query: 281 GYIDPAYISTNKF-TMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDK 339
Y P +IS +++ + + ++S G+++++++ P + EIL+
Sbjct: 203 VYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER--------------DQEILEA 248
Query: 340 QLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEV 374
+L ++ + + +CL P RPS+ E+
Sbjct: 249 ELHFPAHVSP--DCCALIRRCLAPKPSSRPSLEEI 281
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 131
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 132 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGXVATR 186
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 128
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 129 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 183
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 184 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 18/197 (9%)
Query: 125 LGQGAFGPVYKA-TMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLGRLHHRNLVNLI-- 179
+G GA+G V + + SG A+K L+ S K E+ LL + H N++ L+
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 180 ---GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL-DISHGIEYLHEGAV 235
+++ + + + L+N++ ++ ++ +Q + I G++Y+H +
Sbjct: 119 FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLIYQILRGLKYIHSADI 175
Query: 236 PPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPA-YISTNKFT 294
IHRDLK +N+ ++ K+ DFGL++ D +G T Y P ++ +
Sbjct: 176 ---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYN 230
Query: 295 MKSDIFSFGVIIFELIT 311
M DI+S G I+ EL+T
Sbjct: 231 MTVDIWSVGCIMAELLT 247
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 118/277 (42%), Gaps = 48/277 (17%)
Query: 120 NFTNILGQGAFGPV----YKATMPSGGVAAIKVLA-------SDSHQGEKEFQTEVSLLG 168
+ ++G+GAFG V +KA S V A+K+L+ SDS F E ++
Sbjct: 78 DVVKVIGRGAFGEVQLVRHKA---SQKVYAMKLLSKFEMIKRSDS----AFFWEERDIMA 130
Query: 169 RLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEE----RLQIALDIS 224
+ +V L D ++ E+M G L NL+ + + W + + +ALD
Sbjct: 131 FANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAI 190
Query: 225 HGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFG--LSKEEVFDGRNSGLKGTYGY 282
H + +IHRD+K N+LLD K+ADFG + +E GT Y
Sbjct: 191 HSMG---------LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDY 241
Query: 283 IDPAYISTNK----FTMKSDIFSFGVIIFELITAIHP---------HQNLMEYVNLASMS 329
I P + + + + D +S GV +FE++ P + +M++ N
Sbjct: 242 ISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFP 301
Query: 330 QDGVDEILDKQLVGA-CNIQEVRELARIGHKCLHKTP 365
+D K L+ A +EVR L R G + + + P
Sbjct: 302 EDAEISKHAKNLICAFLTDREVR-LGRNGVEEIKQHP 337
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 131
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 132 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 186
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 136
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 137 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 191
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 131
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 132 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 186
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 14 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 73
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 74 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 130
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 131 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 185
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 186 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 217
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 131
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 132 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 186
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 136
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 137 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDXELKILDFGLARHT--DDEMTGYVATR 191
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 138
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 139 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 193
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 137
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 138 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 192
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 131
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 132 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 186
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRL 86
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 143
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 144 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 198
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 199 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 128
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 129 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 183
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 184 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 13 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 72
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 73 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 129
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 130 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 184
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 185 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 216
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 133
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 134 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 188
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 131
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 132 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 186
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 151
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 152 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 206
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 33/224 (14%)
Query: 112 KDIQKATQNF--TNILGQGAFGPV----YKATMPSGGVAAIKVLASDSHQGEKE---FQT 162
+D++ +++ ++G+GAFG V +K+T V A+K+L+ + F
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRK---VYAMKLLSKFEMIKRSDSAFFWE 123
Query: 163 EVSLLGRLHHRNLVNLIGYCVDKGKYM-LIYEFMSNGSLSNLIYSEERVLNWEE----RL 217
E ++ + +V L Y +Y+ ++ E+M G L NL+ + + W +
Sbjct: 124 ERDIMAFANSPWVVQLF-YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEV 182
Query: 218 QIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG--RNSG 275
+ALD H + + IHRD+K N+LLD K+ADFG + +G R
Sbjct: 183 VLALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 233
Query: 276 LKGTYGYIDPAYISTN----KFTMKSDIFSFGVIIFELITAIHP 315
GT YI P + + + + D +S GV ++E++ P
Sbjct: 234 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 97
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 154
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 155 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 209
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 210 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 241
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 93
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 150
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 151 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 205
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 206 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 133
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 134 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 188
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 133
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 134 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 188
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 86
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 143
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 144 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 198
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 199 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 85
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 86 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 142
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 143 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 197
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 198 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 86
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 143
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 144 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 198
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 199 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 33/224 (14%)
Query: 112 KDIQKATQNF--TNILGQGAFGPV----YKATMPSGGVAAIKVLASDSHQGEKE---FQT 162
+D++ +++ ++G+GAFG V +K+T V A+K+L+ + F
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRK---VYAMKLLSKFEMIKRSDSAFFWE 123
Query: 163 EVSLLGRLHHRNLVNLIGYCVDKGKYM-LIYEFMSNGSLSNLIYSEERVLNWEE----RL 217
E ++ + +V L Y +Y+ ++ E+M G L NL+ + + W +
Sbjct: 124 ERDIMAFANSPWVVQLF-YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEV 182
Query: 218 QIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG--RNSG 275
+ALD H + + IHRD+K N+LLD K+ADFG + +G R
Sbjct: 183 VLALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 233
Query: 276 LKGTYGYIDPAYISTN----KFTMKSDIFSFGVIIFELITAIHP 315
GT YI P + + + + D +S GV ++E++ P
Sbjct: 234 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 85
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 86 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 142
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 143 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDXELKILDFGLARHT--DDEMTGYVATR 197
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 198 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLT---DDHVQFLI 131
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 132 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 186
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLT---DDHVQFLI 131
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 132 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDXELKILDFGLARHT--DDEMTGYVATR 186
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 31/209 (14%)
Query: 123 NILGQGAFGPVYKAT-MPSGGVAAIKVLAS-DSHQGEKEFQTEVSLLGRLHHRNLVNLIG 180
++LG+GA+G V AT P+G + AIK + D E+ +L H N++ +
Sbjct: 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFN 76
Query: 181 Y-----CVDKGKYMLIYEFMSNG---SLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+ + +I E M +S + S++ + + + A+ + HG
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSN---- 132
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFD-----GRNSGLK---GTYG 281
VIHRDLK +N+L++ KV DFGL++ E D G+ SG+ T
Sbjct: 133 -----VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRW 187
Query: 282 YIDPAYISTN-KFTMKSDIFSFGVIIFEL 309
Y P + T+ K++ D++S G I+ EL
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 33/224 (14%)
Query: 112 KDIQKATQNF--TNILGQGAFGPV----YKATMPSGGVAAIKVLASDSHQGEKE---FQT 162
+D++ +++ ++G+GAFG V +K+T V A+K+L+ + F
Sbjct: 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTR---KVYAMKLLSKFEMIKRSDSAFFWE 118
Query: 163 EVSLLGRLHHRNLVNLIGYCVDKGKYM-LIYEFMSNGSLSNLIYSEERVLNWEE----RL 217
E ++ + +V L Y +Y+ ++ E+M G L NL+ + + W +
Sbjct: 119 ERDIMAFANSPWVVQLF-YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEV 177
Query: 218 QIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG--RNSG 275
+ALD H + + IHRD+K N+LLD K+ADFG + +G R
Sbjct: 178 VLALDAIHSMGF---------IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT 228
Query: 276 LKGTYGYIDPAYISTN----KFTMKSDIFSFGVIIFELITAIHP 315
GT YI P + + + + D +S GV ++E++ P
Sbjct: 229 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 31/209 (14%)
Query: 123 NILGQGAFGPVYKAT-MPSGGVAAIKVLAS-DSHQGEKEFQTEVSLLGRLHHRNLVNLIG 180
++LG+GA+G V AT P+G + AIK + D E+ +L H N++ +
Sbjct: 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFN 76
Query: 181 Y-----CVDKGKYMLIYEFMSNG---SLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+ + +I E M +S + S++ + + + A+ + HG
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSN---- 132
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFD-----GRNSGLK---GTYG 281
VIHRDLK +N+L++ KV DFGL++ E D G+ SG+ T
Sbjct: 133 -----VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRW 187
Query: 282 YIDPAYISTN-KFTMKSDIFSFGVIIFEL 309
Y P + T+ K++ D++S G I+ EL
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 137
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 138 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDSELKILDFGLARHT--DDEMTGYVATR 192
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 123 NILGQGAFGPVYKATMPSGGVAAIKVLASDSH------QGEKEFQTEVSLLGRLHHRNLV 176
++LG+G++G V K + S + V GE + E+ LL RL H+N++
Sbjct: 11 DLLGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVI 69
Query: 177 NLIG--YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
L+ Y +K K ++ E+ G L E+ + + G+EYLH
Sbjct: 70 QLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG 129
Query: 235 VPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFDGRNSGLKGTYGYIDPAYIS-T 290
++H+D+K N+LL K++ G+++ D +G+ + P +
Sbjct: 130 ---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGL 186
Query: 291 NKFT-MKSDIFSFGVIIFELITAIHPHQ 317
+ F+ K DI+S GV ++ + T ++P +
Sbjct: 187 DTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 133
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 134 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDSELKILDFGLARHT--DDEMTGYVATR 188
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A +G A+K L+ S K E+ L
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 151
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D G T
Sbjct: 152 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMXGXVATR 206
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 120/276 (43%), Gaps = 28/276 (10%)
Query: 120 NFTNILGQGAFGPVYKATMPSGGVAAIKVLASD--SHQGEKEFQTEVSLLGRLHHRNLVN 177
NF L + G ++K G +KVL S + ++F E L H N++
Sbjct: 13 NFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLP 71
Query: 178 LIGYCVDKGKY--MLIYEFMSNGSLSNLIYSEER-VLNWEERLQIALDISHGIEYLHEGA 234
++G C LI + GSL N+++ V++ + ++ ALD + G +LH
Sbjct: 72 VLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLH--T 129
Query: 235 VPPVIHRD-LKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYI----- 288
+ P+I R L S ++ +D A+++ + F ++ G ++ P +
Sbjct: 130 LEPLIPRHALNSRSVXIDEDXTARISXADVK----FSFQSPGRXYAPAWVAPEALQKKPE 185
Query: 289 STNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQ 348
TN+ + +D +SF V+++EL+T P +L ++ +G+ + +
Sbjct: 186 DTNRRS--ADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPTIPPGIS-----P 238
Query: 349 EVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQR 384
V +L +I C ++ P KRP + L K + +
Sbjct: 239 HVSKLXKI---CXNEDPAKRPKFDXIVPILEKXQDK 271
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A +G A+K L+ S K E+ L
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ + ++ +Q +
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLT---DDHVQFLI 127
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D +G T
Sbjct: 128 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMTGYVATR 182
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 111/256 (43%), Gaps = 40/256 (15%)
Query: 115 QKATQNFTNILGQGAFGPVYKATMPSGG--VAAIKVLASDSHQGEKEFQTEVSLLGRLHH 172
Q+ + T ++G G+FG VY+A + G VA KVL QG+ E+ ++ +L H
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QGKAFKNRELQIMRKLDH 72
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISH------- 225
N+V L + G+ E N L + + RV R + L + +
Sbjct: 73 CNIVRLRYFFYSSGEKK--DEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 226 ---GIEYLHEGAVPPVIHRDLKSANILLDHFMRA-KVADFGLSKEEVFDGRNSGLKGTYG 281
+ Y+H + HRD+K N+LLD K+ DFG +K+ V N +
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 282 YIDPAYI-STNKFTMKSDIFSFGVIIFELI--TAIHPHQNLMEYVNLASMSQDGVDEILD 338
Y P I +T D++S G ++ EL+ I P GVD++++
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP-------------GDSGVDQLVE 234
Query: 339 -KQLVGACNIQEVREL 353
+++G +++RE+
Sbjct: 235 IIKVLGTPTREQIREM 250
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 111/256 (43%), Gaps = 40/256 (15%)
Query: 115 QKATQNFTNILGQGAFGPVYKATMPSGG--VAAIKVLASDSHQGEKEFQTEVSLLGRLHH 172
Q+ + T ++G G+FG VY+A + G VA KVL QG+ E+ ++ +L H
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QGKAFKNRELQIMRKLDH 72
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISH------- 225
N+V L + G+ E N L + + RV R + L + +
Sbjct: 73 CNIVRLRYFFYSSGEKK--DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 226 ---GIEYLHEGAVPPVIHRDLKSANILLDHFMRA-KVADFGLSKEEVFDGRNSGLKGTYG 281
+ Y+H + HRD+K N+LLD K+ DFG +K+ V N +
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 282 YIDPAYI-STNKFTMKSDIFSFGVIIFELI--TAIHPHQNLMEYVNLASMSQDGVDEILD 338
Y P I +T D++S G ++ EL+ I P GVD++++
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP-------------GDSGVDQLVE 234
Query: 339 -KQLVGACNIQEVREL 353
+++G +++RE+
Sbjct: 235 IIKVLGTPTREQIREM 250
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V SG A+K+L K+ + E +L ++ LV L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+++ G + + + R R A I EYLH +I+
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 185
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K G L GT Y+ P I + + D +
Sbjct: 186 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGATWTLCGTPEYLAPEIILSKGYNKAVDWW 243
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 244 ALGVLIYEMAAGYPP 258
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 111/256 (43%), Gaps = 40/256 (15%)
Query: 115 QKATQNFTNILGQGAFGPVYKATMPSGG--VAAIKVLASDSHQGEKEFQTEVSLLGRLHH 172
Q+ + T ++G G+FG VY+A + G VA KVL QG+ E+ ++ +L H
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL-----QGKAFKNRELQIMRKLDH 72
Query: 173 RNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISH------- 225
N+V L + G+ E N L + + RV R + L + +
Sbjct: 73 CNIVRLRYFFYSSGEKK--DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 226 ---GIEYLHEGAVPPVIHRDLKSANILLDHFMRA-KVADFGLSKEEVFDGRNSGLKGTYG 281
+ Y+H + HRD+K N+LLD K+ DFG +K+ V N +
Sbjct: 131 LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 282 YIDPAYI-STNKFTMKSDIFSFGVIIFELI--TAIHPHQNLMEYVNLASMSQDGVDEILD 338
Y P I +T D++S G ++ EL+ I P GVD++++
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP-------------GDSGVDQLVE 234
Query: 339 -KQLVGACNIQEVREL 353
+++G +++RE+
Sbjct: 235 IIKVLGTPTREQIREM 250
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 31/209 (14%)
Query: 123 NILGQGAFGPVYKAT-MPSGGVAAIKVLAS-DSHQGEKEFQTEVSLLGRLHHRNLVNLIG 180
++LG+GA+G V AT P+G + AIK + D E+ +L H N++ +
Sbjct: 17 SLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFN 76
Query: 181 Y-----CVDKGKYMLIYEFMSNG---SLSNLIYSEERVLNWEERLQIALDISHGIEYLHE 232
+ + +I E M +S + S++ + + + A+ + HG
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSN---- 132
Query: 233 GAVPPVIHRDLKSANILLDHFMRAKVADFGLSK---EEVFD-----GRNSGL---KGTYG 281
VIHRDLK +N+L++ KV DFGL++ E D G+ SG+ T
Sbjct: 133 -----VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRW 187
Query: 282 YIDPAYISTN-KFTMKSDIFSFGVIIFEL 309
Y P + T+ K++ D++S G I+ EL
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 131
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ D+GL++ D +G T
Sbjct: 132 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDYGLARHT--DDEMTGYVATR 186
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 97
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 154
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ D G T
Sbjct: 155 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMXGYVATR 209
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 210 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 241
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 10/195 (5%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASDSHQGEKEFQ---TEVSLLGRLHHRNLVNLIG 180
LG G+FG V SG A+K+L K+ + E +L ++ LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
D ++ E+++ G + + + R R A I EYLH +I+
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIY 164
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTMKSDIF 300
RDLK N+L+D +V DFG +K GR L GT + P I + + D +
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTWXLCGTPEALAPEIILSKGYNKAVDWW 222
Query: 301 SFGVIIFELITAIHP 315
+ GV+I+E+ P
Sbjct: 223 ALGVLIYEMAAGYPP 237
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 21/200 (10%)
Query: 125 LGQGAFGPVYKA-TMPSGGVAAIKVL--ASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGY 181
+G+G++G V+K +G + AIK + D +K E+ +L +L H NLVNL+
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 182 CVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERL--QIALDISHGIEYLHEGAVPPVI 239
K + L++E+ + L L + V E L I + + H+ I
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRGV---PEHLVKSITWQTLQAVNFCHKHNC---I 124
Query: 240 HRDLKSANILLDHFMRAKVADFGLSK-----EEVFDGRNSGLKGTYGYIDPA-YISTNKF 293
HRD+K NIL+ K+ DFG ++ + +D + T Y P + ++
Sbjct: 125 HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA----TRWYRSPELLVGDTQY 180
Query: 294 TMKSDIFSFGVIIFELITAI 313
D+++ G + EL++ +
Sbjct: 181 GPPVDVWAIGCVFAELLSGV 200
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 16/195 (8%)
Query: 125 LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSLLGRLHHRNLVNLIGY 181
+G GA G V A G+ A+K L+ + K E+ LL ++H+N+++L+
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 91
Query: 182 CVDKGKY------MLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAV 235
+ L+ E M + +L +I+ E L+ E + + GI++LH +
Sbjct: 92 FTPQKTLEEFQDVYLVMELM-DANLCQVIHME---LDHERMSYLLYQMLCGIKHLHSAGI 147
Query: 236 PPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAYISTNKFTM 295
IHRDLK +NI++ K+ DFGL++ + + T Y P I +
Sbjct: 148 ---IHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYAA 204
Query: 296 KSDIFSFGVIIFELI 310
DI+S G I+ EL+
Sbjct: 205 NVDIWSVGCIMGELV 219
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 9/196 (4%)
Query: 125 LGQGAFGPVYKATMPSGG--VAAIKVLASDSHQG-EKEFQTEVSLLGRLHHRNLVNLIGY 181
+G+G +G V+KA VA +V D +G E+ LL L H+N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 182 CVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHR 241
K L++EF + L S L+ E + G+ + H V +HR
Sbjct: 70 LHSDKKLTLVFEF-CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV---LHR 125
Query: 242 DLKSANILLDHFMRAKVADFGLSKEEVFDGRN-SGLKGTYGYIDPAYISTNK-FTMKSDI 299
DLK N+L++ K+A+FGL++ R S T Y P + K ++ D+
Sbjct: 126 DLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDM 185
Query: 300 FSFGVIIFELITAIHP 315
+S G I EL A P
Sbjct: 186 WSAGCIFAELANAGRP 201
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 99/212 (46%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 138
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ +G T
Sbjct: 139 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTA--DEMTGYVATR 193
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 99/212 (46%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 138
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ +G T
Sbjct: 139 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTA--DEMTGYVATR 193
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 99/212 (46%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 138
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DFGL++ +G T
Sbjct: 139 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTA--DEMTGYVATR 193
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 97/226 (42%), Gaps = 31/226 (13%)
Query: 98 TSAPSASGIPRYAYKDIQKATQNFTNILGQGAFGPVYKA--TMPSGGVAAIKVLASDSHQ 155
++APSA+ I RY + I K LG+G +G VYKA T+ + VA ++ +
Sbjct: 25 SAAPSATSIDRY--RRITK--------LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEE 74
Query: 156 GEKEFQT-EVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEE---RVL 211
G EVSLL L HRN++ L + LI+E+ N + + + RV+
Sbjct: 75 GVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVI 134
Query: 212 NWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILL-----DHFMRAKVADFGLSKE 266
+ +G+ + H +HRDLK N+LL K+ DFGL++
Sbjct: 135 K-----SFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186
Query: 267 EVFDGRNSGLKGTYGYIDPAYI--STNKFTMKSDIFSFGVIIFELI 310
R + + P I + ++ DI+S I E++
Sbjct: 187 FGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 26/209 (12%)
Query: 124 ILGQGAFGPVYKATMPSGG-VAAIKVLASDSHQGEKE---FQTEVSLLGRLHHRNLVNLI 179
++G+GAFG V + + V A+K+L E F+ E +L + + L
Sbjct: 81 VIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLH 140
Query: 180 GYCVDKGKYMLIYEFMSNGSLSNLI------YSEERVLNWEERLQIALDISHGIEYLHEG 233
D L+ ++ G L L+ EE + + IA+D H + Y
Sbjct: 141 YAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY---- 196
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG--RNSGLKGTYGYIDPAYIST- 290
+HRD+K NIL+D ++ADFG + + DG ++S GT YI P +
Sbjct: 197 -----VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAM 251
Query: 291 ----NKFTMKSDIFSFGVIIFELITAIHP 315
++ + D +S GV ++E++ P
Sbjct: 252 EGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 24/217 (11%)
Query: 111 YKDIQKATQNFTNI--------LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKE 159
+ +Q A FT + +G GA G V A G+ A+K L+ + K
Sbjct: 8 FYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKR 67
Query: 160 FQTEVSLLGRLHHRNLVNLIGYCVDKGKY------MLIYEFMSNGSLSNLIYSEERVLNW 213
E+ LL ++H+N+++L+ + L+ E M + +L +I+ E L+
Sbjct: 68 AYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHME---LDH 123
Query: 214 EERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN 273
E + + GI++LH + IHRDLK +NI++ K+ DFGL++ +
Sbjct: 124 ERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMM 180
Query: 274 SGLKGTYGYIDPAYISTNKFTMKSDIFSFGVIIFELI 310
+ T Y P I + DI+S G I+ EL+
Sbjct: 181 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELV 217
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 99/212 (46%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKA-TMPSGGVAAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A +G A+K L+ S K E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 131
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ DF L++ D +G T
Sbjct: 132 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFYLARHT--DDEMTGYVATR 186
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 20/220 (9%)
Query: 125 LGQGAFGPVYKATMP-SGGVAAIKVL--ASDSHQGEKEFQTEVSLLGRLHHRNLV---NL 178
+G GA+G V A +G AIK + A D K E+ +L H N++ ++
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 179 IGYCVDKGKYMLIYEFMS--NGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVP 236
+ V G++ +Y + L +I+S + L E + G++Y+H V
Sbjct: 123 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMHSAQV- 180
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN-----SGLKGTYGYIDPA-YIST 290
IHRDLK +N+L++ K+ DFG+++ + T Y P +S
Sbjct: 181 --IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSL 238
Query: 291 NKFTMKSDIFSFGVIIFELIT--AIHPHQNLMEYVNLASM 328
+++T D++S G I E++ + P +N + + L M
Sbjct: 239 HEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMM 278
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 99/212 (46%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 131
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ FGL++ D +G T
Sbjct: 132 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILGFGLARHT--DDEMTGYVATR 186
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 81/204 (39%), Gaps = 21/204 (10%)
Query: 124 ILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGE-----------KEFQTEVSLLGRLHH 172
+ G++G V G AIK + + G K E+ LL HH
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 173 RNLVNLIGYCVD-----KGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGI 227
N++ L V K L+ E M L+ +I+ + V++ + I G+
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMYHILLGL 147
Query: 228 EYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAY 287
LHE V +HRDL NILL + DF L++E+ D + Y P
Sbjct: 148 HVLHEAGV---VHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPEL 204
Query: 288 ISTNK-FTMKSDIFSFGVIIFELI 310
+ K FT D++S G ++ E+
Sbjct: 205 VMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 20/220 (9%)
Query: 125 LGQGAFGPVYKATMP-SGGVAAIKVL--ASDSHQGEKEFQTEVSLLGRLHHRNLV---NL 178
+G GA+G V A +G AIK + A D K E+ +L H N++ ++
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 179 IGYCVDKGKYMLIYEFMS--NGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVP 236
+ V G++ +Y + L +I+S + L E + G++Y+H V
Sbjct: 122 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMHSAQV- 179
Query: 237 PVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRN-----SGLKGTYGYIDPA-YIST 290
IHRDLK +N+L++ K+ DFG+++ + T Y P +S
Sbjct: 180 --IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSL 237
Query: 291 NKFTMKSDIFSFGVIIFELIT--AIHPHQNLMEYVNLASM 328
+++T D++S G I E++ + P +N + + L M
Sbjct: 238 HEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMM 277
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 99/212 (46%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 131
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ D GL++ D +G T
Sbjct: 132 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDAGLARHT--DDEMTGYVATR 186
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 81/204 (39%), Gaps = 21/204 (10%)
Query: 124 ILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGE-----------KEFQTEVSLLGRLHH 172
+ G++G V G AIK + + G K E+ LL HH
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 173 RNLVNLIGYCVD-----KGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGI 227
N++ L V K L+ E M L+ +I+ + V++ + I G+
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMYHILLGL 147
Query: 228 EYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPAY 287
LHE V +HRDL NILL + DF L++E+ D + Y P
Sbjct: 148 HVLHEAGV---VHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPEL 204
Query: 288 ISTNK-FTMKSDIFSFGVIIFELI 310
+ K FT D++S G ++ E+
Sbjct: 205 VMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 99/212 (46%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 131
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ D GL++ D +G T
Sbjct: 132 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDRGLARHT--DDEMTGYVATR 186
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 117/283 (41%), Gaps = 45/283 (15%)
Query: 124 ILGQGAFGPVYKATMPSGGV-AAIKVLASD--SHQGE----KEFQTEVSLLGRLH--HRN 174
+LG G FG VY S + AIK + D S GE EV LL ++
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
++ L+ + ++LI E M +E L E + + + H
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 134
Query: 235 VPPVIHRDLKSANILLD-HFMRAKVADFG---LSKEEVFDGRNSGLKGTYGYIDPAYIST 290
V +HRD+K NIL+D + K+ DFG L K+ V+ + GT Y P +I
Sbjct: 135 V---LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRY 187
Query: 291 NKFTMKS-DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE 349
+++ +S ++S G+++++++ P ++ E + ++ +Q V + E
Sbjct: 188 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR---------GQVFFRQRVSS----E 234
Query: 350 VRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTM 392
+ L R CL P RP+ E+ Q H QD +
Sbjct: 235 CQHLIRW---CLALRPSDRPTFEEI--------QNHPWMQDVL 266
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 102/233 (43%), Gaps = 38/233 (16%)
Query: 99 SAPSASGIPRYAYKDIQKATQNFTNI--LGQGAFGPV---YKATMPSGGVAAIKVLASDS 153
S P A + K + + Q + +G GA+G V Y A + A+K L+
Sbjct: 8 SGPRAGFYRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQK--VAVKKLS--- 62
Query: 154 HQGEKEFQT---------EVSLLGRLHHRNLVNLIGYCV------DKGKYMLIYEFMSNG 198
+ FQ+ E+ LL L H N++ L+ D + L+ M
Sbjct: 63 ----RPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GA 117
Query: 199 SLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKV 258
L+N++ S+ L+ E + + G++Y+H + IHRDLK +N+ ++ ++
Sbjct: 118 DLNNIVKSQ--ALSDEHVQFLVYQLLRGLKYIHSAGI---IHRDLKPSNVAVNEDSELRI 172
Query: 259 ADFGLSKEEVFDGRNSGLKGTYGYIDPA-YISTNKFTMKSDIFSFGVIIFELI 310
DFGL+++ D +G T Y P ++ + DI+S G I+ EL+
Sbjct: 173 LDFGLARQA--DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 99/212 (46%), Gaps = 20/212 (9%)
Query: 112 KDIQKATQNFTNI--LGQGAFGPVYKATMPSGGV-AAIKVLAS--DSHQGEKEFQTEVSL 166
K I + + + N+ +G GA+G V A G+ A+K L+ S K E+ L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 167 LGRLHHRNLVNLI-----GYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIAL 221
L + H N++ L+ +++ + + + L+N++ ++ ++ +Q +
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT---DDHVQFLI 131
Query: 222 -DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTY 280
I G++Y+H + IHRDLK +N+ ++ K+ D GL++ D +G T
Sbjct: 132 YQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDGGLARHT--DDEMTGYVATR 186
Query: 281 GYIDPA-YISTNKFTMKSDIFSFGVIIFELIT 311
Y P ++ + DI+S G I+ EL+T
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 102/236 (43%), Gaps = 31/236 (13%)
Query: 102 SASGIPRYAYKD---IQKATQNFTNILGQGAFGPVYKA-TMPSGGVAAIKVL-----ASD 152
S+ +PR + D + + ++G+G F V + +G A+K++ S
Sbjct: 8 SSGLVPRGSMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSS 67
Query: 153 SHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSL---------SNL 203
++ + E S+ L H ++V L+ G +++EFM L +
Sbjct: 68 PGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGF 127
Query: 204 IYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILL---DHFMRAKVAD 260
+YSE ++ ++ AL Y H+ +IHRD+K +LL ++ K+
Sbjct: 128 VYSEAVASHYMRQILEAL------RYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGG 178
Query: 261 FGLSKEEVFDGRNSGLK-GTYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHP 315
FG++ + G +G + GT ++ P + + D++ GVI+F L++ P
Sbjct: 179 FGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 234
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 22/198 (11%)
Query: 125 LGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLGRLHHRNLVNLI 179
+G GA+G V Y A + A+K L+ S + E+ LL L H N++ L+
Sbjct: 28 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 180 GYCV------DKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEG 233
D + L+ M L+N++ + L+ E + + G++Y+H
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQ--ALSDEHVQFLVYQLLRGLKYIHSA 142
Query: 234 AVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYIDPA-YISTNK 292
+ IHRDLK +N+ ++ ++ DFGL+++ D +G T Y P ++
Sbjct: 143 GI---IHRDLKPSNVAVNEDCELRILDFGLARQA--DEEMTGYVATRWYRAPEIMLNWMH 197
Query: 293 FTMKSDIFSFGVIIFELI 310
+ DI+S G I+ EL+
Sbjct: 198 YNQTVDIWSVGCIMAELL 215
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 93/215 (43%), Gaps = 28/215 (13%)
Query: 120 NFTNILGQGAFGPVYKA-TMPSGGVAAIKVL-----ASDSHQGEKEFQTEVSLLGRLHHR 173
++G+G F V + +G A+K++ S ++ + E S+ L H
Sbjct: 27 ELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHP 86
Query: 174 NLVNLIGYCVDKGKYMLIYEFMSNGSL---------SNLIYSEERVLNWEERLQIALDIS 224
++V L+ G +++EFM L + +YSE ++ ++ AL
Sbjct: 87 HIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL--- 143
Query: 225 HGIEYLHEGAVPPVIHRDLKSANILL---DHFMRAKVADFGLSKEEVFDGRNSGLK-GTY 280
Y H+ +IHRD+K +LL ++ K+ FG++ + G +G + GT
Sbjct: 144 ---RYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTP 197
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHP 315
++ P + + D++ GVI+F L++ P
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 114 IQKATQNFTNILGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLG 168
+ K QN I G GA G V Y A + AIK L+ + K E+ L+
Sbjct: 22 VLKRYQNLKPI-GSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 169 RLHHRNLVNLIGYCVDKG---KYMLIYEFMS--NGSLSNLIYSEERVLNWEERLQIALDI 223
++H+N++ L+ + ++ +Y M + +LS +I E L+ E + +
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLLYQM 135
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYI 283
GI++LH + IHRDLK +NI++ K+ DFGL++ + T Y
Sbjct: 136 LVGIKHLHSAGI---IHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 284 DPAYISTNKFTMKSDIFSFGVIIFELI 310
P I + DI+S GVI+ E+I
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 29/205 (14%)
Query: 125 LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCV 183
LG+G+FG V++ G A+K + + + E E+ L +V L G V
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-----ELVACAGLSSPRIVPLYG-AV 133
Query: 184 DKGKYMLIY-EFMSNGSLSNLI-----YSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
+G ++ I+ E + GSL LI E+R L + L AL+ G+EYLH
Sbjct: 134 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYY---LGQALE---GLEYLH---TRR 184
Query: 238 VIHRDLKSANILLDH-FMRAKVADFGLSKEEVFDGRNSGL------KGTYGYIDPAYIST 290
++H D+K+ N+LL RA + DFG + DG L GT ++ P +
Sbjct: 185 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 244
Query: 291 NKFTMKSDIFSFGVIIFELITAIHP 315
K DI+S ++ ++ HP
Sbjct: 245 KPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 38/233 (16%)
Query: 99 SAPSASGIPRYAYKDIQKATQNFTNI--LGQGAFGPV---YKATMPSGGVAAIKVLASDS 153
S P A + K + + Q + +G GA+G V Y A + A+K L+
Sbjct: 8 SGPRAGFYRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQK--VAVKKLS--- 62
Query: 154 HQGEKEFQT---------EVSLLGRLHHRNLVNLIGYCV------DKGKYMLIYEFMSNG 198
+ FQ+ E+ LL L H N++ L+ D + L+ M
Sbjct: 63 ----RPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GA 117
Query: 199 SLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKV 258
L+N++ + L+ E + + G++Y+H + IHRDLK +N+ ++ ++
Sbjct: 118 DLNNIVKCQ--ALSDEHVQFLVYQLLRGLKYIHSAGI---IHRDLKPSNVAVNEDSELRI 172
Query: 259 ADFGLSKEEVFDGRNSGLKGTYGYIDPA-YISTNKFTMKSDIFSFGVIIFELI 310
DFGL+++ D +G T Y P ++ + DI+S G I+ EL+
Sbjct: 173 LDFGLARQA--DEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 223
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 22/217 (10%)
Query: 109 YAYKD-IQKATQNFTNILGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGEKEFQTEVSL 166
Y Y++ + AT LG+G+FG V++ G A+K + + + E E+
Sbjct: 86 YEYREEVHWATHQLR--LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMA 138
Query: 167 LGRLHHRNLVNLIGYCVDKGKYMLIY-EFMSNGSLSNLIYSEERVLNWEERLQIALDISH 225
L +V L G V +G ++ I+ E + GSL L+ E+ L + L
Sbjct: 139 CAGLTSPRIVPLYG-AVREGPWVNIFMELLEGGSLGQLV-KEQGCLPEDRALYYLGQALE 196
Query: 226 GIEYLHEGAVPPVIHRDLKSANILLDH-FMRAKVADFGLSKEEVFDGRNSGL------KG 278
G+EYLH ++H D+K+ N+LL A + DFG + DG L G
Sbjct: 197 GLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPG 253
Query: 279 TYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHP 315
T ++ P + K D++S ++ ++ HP
Sbjct: 254 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 114 IQKATQNFTNILGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLG 168
+ K QN I G GA G V Y A + AIK L+ + K E+ L+
Sbjct: 22 VLKRYQNLKPI-GSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 169 RLHHRNLVNLIGYCVDKG---KYMLIYEFMS--NGSLSNLIYSEERVLNWEERLQIALDI 223
++H+N++ L+ + ++ +Y M + +LS +I E L+ E + +
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLLYQM 135
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYI 283
GI++LH + IHRDLK +NI++ K+ DFGL++ + T Y
Sbjct: 136 LVGIKHLHSAGI---IHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 284 DPAYISTNKFTMKSDIFSFGVIIFELI 310
P I + DI+S GVI+ E+I
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 102/227 (44%), Gaps = 27/227 (11%)
Query: 118 TQNFTNI--LGQGAFGPVYKATMPSGGVAAI-------KVLASDSHQGEK--EFQTEVSL 166
+Q ++ + LG GAFG V+ A + KVL + K + E+++
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 167 LGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQ--IALDIS 224
L R+ H N++ ++ ++G + L+ E +GS +L +R +E L I +
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVME--KHGSGLDLFAFIDRHPRLDEPLASYIFRQLV 140
Query: 225 HGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFG----LSKEEVFDGRNSGLKGTY 280
+ YL + +IHRD+K NI++ K+ DFG L + ++F GT
Sbjct: 141 SAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLF----YTFCGTI 193
Query: 281 GYIDPAYISTNKFT-MKSDIFSFGVIIFELITAIHPHQNLMEYVNLA 326
Y P + N + + +++S GV ++ L+ +P L E V A
Sbjct: 194 EYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAA 240
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 22/217 (10%)
Query: 109 YAYKD-IQKATQNFTNILGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGEKEFQTEVSL 166
Y Y++ + AT LG+G+FG V++ G A+K + + + E E+
Sbjct: 67 YEYREEVHWATHQLR--LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMA 119
Query: 167 LGRLHHRNLVNLIGYCVDKGKYMLIY-EFMSNGSLSNLIYSEERVLNWEERLQIALDISH 225
L +V L G V +G ++ I+ E + GSL L+ E+ L + L
Sbjct: 120 CAGLTSPRIVPLYG-AVREGPWVNIFMELLEGGSLGQLV-KEQGCLPEDRALYYLGQALE 177
Query: 226 GIEYLHEGAVPPVIHRDLKSANILLDH-FMRAKVADFGLSKEEVFDGRNSGL------KG 278
G+EYLH ++H D+K+ N+LL A + DFG + DG L G
Sbjct: 178 GLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPG 234
Query: 279 TYGYIDPAYISTNKFTMKSDIFSFGVIIFELITAIHP 315
T ++ P + K D++S ++ ++ HP
Sbjct: 235 TETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 114 IQKATQNFTNILGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLG 168
+ K QN I G GA G V Y A + AIK L+ + K E+ L+
Sbjct: 22 VLKRYQNLKPI-GSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 169 RLHHRNLVNLIGYCVDKGKY------MLIYEFMSNGSLSNLIYSEERVLNWEERLQIALD 222
++H+N+++L+ + L+ E M + +L +I E L+ E +
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME---LDHERMSYLLYQ 134
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+ GI++LH + IHRDLK +NI++ K+ DFGL++ + T Y
Sbjct: 135 MLXGIKHLHSAGI---IHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYY 191
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELI 310
P I + DI+S G I+ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 98/219 (44%), Gaps = 15/219 (6%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVD 184
LG+G FG V++ S + + + E+S+L HRN+++L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 185 KGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHRDLK 244
+ ++I+EF+S + I + LN E + + +++LH + H D++
Sbjct: 73 MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIG---HFDIR 129
Query: 245 SANILLDHFMRA--KVADFGLSKEEVFDGRNSGLKGTY-GYIDPAYISTNKFTMKSDIFS 301
NI+ + K+ +FG ++ ++ G N L T Y P + + +D++S
Sbjct: 130 PENIIYQTRRSSTIKIIEFGQAR-QLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWS 188
Query: 302 FGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQ 340
G +++ L++ I+P LA +Q ++ I++ +
Sbjct: 189 LGTLVYVLLSGINPF--------LAETNQQIIENIMNAE 219
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 29/205 (14%)
Query: 125 LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCV 183
+G+G+FG V++ G A+K + + + E E+ L +V L G V
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-----ELVACAGLSSPRIVPLYG-AV 135
Query: 184 DKGKYMLIY-EFMSNGSLSNLI-----YSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
+G ++ I+ E + GSL LI E+R L + L AL+ G+EYLH
Sbjct: 136 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYY---LGQALE---GLEYLH---TRR 186
Query: 238 VIHRDLKSANILLDH-FMRAKVADFGLSKEEVFDGRNSGL------KGTYGYIDPAYIST 290
++H D+K+ N+LL RA + DFG + DG L GT ++ P +
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 246
Query: 291 NKFTMKSDIFSFGVIIFELITAIHP 315
K DI+S ++ ++ HP
Sbjct: 247 KPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 29/205 (14%)
Query: 125 LGQGAFGPVYKATMPSGGV-AAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCV 183
+G+G+FG V++ G A+K + + + E E+ L +V L G V
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE-----ELVACAGLSSPRIVPLYG-AV 119
Query: 184 DKGKYMLIY-EFMSNGSLSNLI-----YSEERVLNWEERLQIALDISHGIEYLHEGAVPP 237
+G ++ I+ E + GSL LI E+R L + L AL+ G+EYLH
Sbjct: 120 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYY---LGQALE---GLEYLH---TRR 170
Query: 238 VIHRDLKSANILLDH-FMRAKVADFGLSKEEVFDGRNSGL------KGTYGYIDPAYIST 290
++H D+K+ N+LL RA + DFG + DG L GT ++ P +
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 230
Query: 291 NKFTMKSDIFSFGVIIFELITAIHP 315
K DI+S ++ ++ HP
Sbjct: 231 KPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 45/283 (15%)
Query: 124 ILGQGAFGPVYKATMPSGGVA-AIKVLASD--SHQGE----KEFQTEVSLLGRLH--HRN 174
+LG G FG VY S + AIK + D S GE EV LL ++
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
++ L+ + ++LI E +E L E + + + H
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 149
Query: 235 VPPVIHRDLKSANILLD-HFMRAKVADFG---LSKEEVFDGRNSGLKGTYGYIDPAYIST 290
V +HRD+K NIL+D + K+ DFG L K+ V+ + GT Y P +I
Sbjct: 150 V---LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRY 202
Query: 291 NKFTMKS-DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE 349
+++ +S ++S G+++++++ P ++ E + ++ +Q V + E
Sbjct: 203 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR---------GQVFFRQRVSS----E 249
Query: 350 VRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTM 392
+ L R CL P RP+ E+ Q H QD +
Sbjct: 250 CQHLIRW---CLALRPSDRPTFEEI--------QNHPWMQDVL 281
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 45/283 (15%)
Query: 124 ILGQGAFGPVYKATMPSGGV-AAIKVLASD--SHQGE----KEFQTEVSLLGRLH--HRN 174
+LG G FG VY S + AIK + D S GE EV LL ++
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
++ L+ + ++LI E +E L E + + + H
Sbjct: 75 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 134
Query: 235 VPPVIHRDLKSANILLD-HFMRAKVADFG---LSKEEVFDGRNSGLKGTYGYIDPAYIST 290
V +HRD+K NIL+D + K+ DFG L K+ V+ + GT Y P +I
Sbjct: 135 V---LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRY 187
Query: 291 NKFTMKS-DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE 349
+++ +S ++S G+++++++ P ++ E + ++ +Q V + E
Sbjct: 188 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR---------GQVFFRQRVSS----E 234
Query: 350 VRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTM 392
+ L R CL P RP+ E+ Q H QD +
Sbjct: 235 CQHLIRW---CLALRPSDRPTFEEI--------QNHPWMQDVL 266
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 114 IQKATQNFTNILGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLG 168
+ K QN I G GA G V Y A + AIK L+ + K E+ L+
Sbjct: 22 VLKRYQNLKPI-GSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 169 RLHHRNLVNLIGYCVDKGKY------MLIYEFMSNGSLSNLIYSEERVLNWEERLQIALD 222
++H+N+++L+ + L+ E M + +L +I E L+ E +
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQ 134
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+ GI++LH + IHRDLK +NI++ K+ DFGL++ + T Y
Sbjct: 135 MLCGIKHLHSAGI---IHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYY 191
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELI 310
P I + DI+S G I+ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 45/283 (15%)
Query: 124 ILGQGAFGPVYKATMPSGGVA-AIKVLASD--SHQGE----KEFQTEVSLLGRLH--HRN 174
+LG G FG VY S + AIK + D S GE EV LL ++
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
++ L+ + ++LI E +E L E + + + H
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 235 VPPVIHRDLKSANILLD-HFMRAKVADFG---LSKEEVFDGRNSGLKGTYGYIDPAYIST 290
V +HRD+K NIL+D + K+ DFG L K+ V+ + GT Y P +I
Sbjct: 151 V---LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRY 203
Query: 291 NKFTMKS-DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE 349
+++ +S ++S G+++++++ P ++ E + ++ +Q V + E
Sbjct: 204 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR---------GQVFFRQRVSS----E 250
Query: 350 VRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTM 392
+ L R CL P RP+ E+ Q H QD +
Sbjct: 251 CQHLIRW---CLALRPSDRPTFEEI--------QNHPWMQDVL 282
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 45/283 (15%)
Query: 124 ILGQGAFGPVYKATMPSGGV-AAIKVLASD--SHQGE----KEFQTEVSLLGRLH--HRN 174
+LG G FG VY S + AIK + D S GE EV LL ++
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
++ L+ + ++LI E +E L E + + + H
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 135
Query: 235 VPPVIHRDLKSANILLD-HFMRAKVADFG---LSKEEVFDGRNSGLKGTYGYIDPAYIST 290
V +HRD+K NIL+D + K+ DFG L K+ V+ + GT Y P +I
Sbjct: 136 V---LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRY 188
Query: 291 NKFTMKS-DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE 349
+++ +S ++S G+++++++ P ++ E + ++ +Q V + E
Sbjct: 189 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR---------GQVFFRQRVSS----E 235
Query: 350 VRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTM 392
+ L R CL P RP+ E+ Q H QD +
Sbjct: 236 CQHLIRW---CLALRPSDRPTFEEI--------QNHPWMQDVL 267
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 45/283 (15%)
Query: 124 ILGQGAFGPVYKATMPSGGV-AAIKVLASD--SHQGE----KEFQTEVSLLGRLH--HRN 174
+LG G FG VY S + AIK + D S GE EV LL ++
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
++ L+ + ++LI E +E L E + + + H
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 135
Query: 235 VPPVIHRDLKSANILLD-HFMRAKVADFG---LSKEEVFDGRNSGLKGTYGYIDPAYIST 290
V +HRD+K NIL+D + K+ DFG L K+ V+ + GT Y P +I
Sbjct: 136 V---LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRY 188
Query: 291 NKFTMKS-DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE 349
+++ +S ++S G+++++++ P ++ E + ++ +Q V + E
Sbjct: 189 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR---------GQVFFRQRVSS----E 235
Query: 350 VRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTM 392
+ L R CL P RP+ E+ Q H QD +
Sbjct: 236 CQHLIRW---CLALRPSDRPTFEEI--------QNHPWMQDVL 267
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 45/283 (15%)
Query: 124 ILGQGAFGPVYKATMPSGGV-AAIKVLASD--SHQGE----KEFQTEVSLLGRLH--HRN 174
+LG G FG VY S + AIK + D S GE EV LL ++
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
++ L+ + ++LI E +E L E + + + H
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 130
Query: 235 VPPVIHRDLKSANILLD-HFMRAKVADFG---LSKEEVFDGRNSGLKGTYGYIDPAYIST 290
V +HRD+K NIL+D + K+ DFG L K+ V+ + GT Y P +I
Sbjct: 131 V---LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRY 183
Query: 291 NKFTMKS-DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE 349
+++ +S ++S G+++++++ P ++ E + ++ +Q V + E
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR---------GQVFFRQRVSS----E 230
Query: 350 VRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTM 392
+ L R CL P RP+ E+ Q H QD +
Sbjct: 231 CQHLIRW---CLALRPSDRPTFEEI--------QNHPWMQDVL 262
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 45/283 (15%)
Query: 124 ILGQGAFGPVYKATMPSGGVA-AIKVLASD--SHQGE----KEFQTEVSLLGRLH--HRN 174
+LG G FG VY S + AIK + D S GE EV LL ++
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
++ L+ + ++LI E +E L E + + + H
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 235 VPPVIHRDLKSANILLD-HFMRAKVADFG---LSKEEVFDGRNSGLKGTYGYIDPAYIST 290
V +HRD+K NIL+D + K+ DFG L K+ V+ + GT Y P +I
Sbjct: 163 V---LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRY 215
Query: 291 NKFTMKS-DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE 349
+++ +S ++S G+++++++ P ++ E + ++ +Q V + E
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR---------GQVFFRQRVSS----E 262
Query: 350 VRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTM 392
+ L R CL P RP+ E+ Q H QD +
Sbjct: 263 CQHLIRW---CLALRPSDRPTFEEI--------QNHPWMQDVL 294
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 45/283 (15%)
Query: 124 ILGQGAFGPVYKATMPSGGVA-AIKVLASD--SHQGE----KEFQTEVSLLGRLH--HRN 174
+LG G FG VY S + AIK + D S GE EV LL ++
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
++ L+ + ++LI E +E L E + + + H
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 235 VPPVIHRDLKSANILLD-HFMRAKVADFG---LSKEEVFDGRNSGLKGTYGYIDPAYIST 290
V +HRD+K NIL+D + K+ DFG L K+ V+ + GT Y P +I
Sbjct: 163 V---LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRY 215
Query: 291 NKFTMKS-DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE 349
+++ +S ++S G+++++++ P ++ E + ++ +Q V + E
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG---------GQVFFRQRVSS----E 262
Query: 350 VRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTM 392
+ L R CL P RP+ E+ Q H QD +
Sbjct: 263 CQHLIRW---CLALRPSDRPTFEEI--------QNHPWMQDVL 294
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 45/283 (15%)
Query: 124 ILGQGAFGPVYKATMPSGGVA-AIKVLASD--SHQGE----KEFQTEVSLLGRLH--HRN 174
+LG G FG VY S + AIK + D S GE EV LL ++
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
++ L+ + ++LI E +E L E + + + H
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 135
Query: 235 VPPVIHRDLKSANILLD-HFMRAKVADFG---LSKEEVFDGRNSGLKGTYGYIDPAYIST 290
V +HRD+K NIL+D + K+ DFG L K+ V+ + GT Y P +I
Sbjct: 136 V---LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRY 188
Query: 291 NKFTMKS-DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE 349
+++ +S ++S G+++++++ P ++ E + ++ +Q V + E
Sbjct: 189 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR---------GQVFFRQRVSS----E 235
Query: 350 VRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTM 392
+ L R CL P RP+ E+ Q H QD +
Sbjct: 236 CQHLIRW---CLALRPSDRPTFEEI--------QNHPWMQDVL 267
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 45/283 (15%)
Query: 124 ILGQGAFGPVYKATMPSGGVA-AIKVLASD--SHQGE----KEFQTEVSLLGRLH--HRN 174
+LG G FG VY S + AIK + D S GE EV LL ++
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
++ L+ + ++LI E +E L E + + + H
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 235 VPPVIHRDLKSANILLD-HFMRAKVADFG---LSKEEVFDGRNSGLKGTYGYIDPAYIST 290
V +HRD+K NIL+D + K+ DFG L K+ V+ + GT Y P +I
Sbjct: 164 V---LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRY 216
Query: 291 NKFTMKS-DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE 349
+++ +S ++S G+++++++ P ++ E + ++ +Q V + E
Sbjct: 217 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG---------GQVFFRQRVSS----E 263
Query: 350 VRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTM 392
+ L R CL P RP+ E+ Q H QD +
Sbjct: 264 CQHLIRW---CLALRPSDRPTFEEI--------QNHPWMQDVL 295
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 45/283 (15%)
Query: 124 ILGQGAFGPVYKATMPSGGV-AAIKVLASD--SHQGE----KEFQTEVSLLGRLH--HRN 174
+LG G FG VY S + AIK + D S GE EV LL ++
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
++ L+ + ++LI E +E L E + + + H
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 235 VPPVIHRDLKSANILLD-HFMRAKVADFG---LSKEEVFDGRNSGLKGTYGYIDPAYIST 290
V +HRD+K NIL+D + K+ DFG L K+ V+ + GT Y P +I
Sbjct: 163 V---LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRY 215
Query: 291 NKFTMKS-DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE 349
+++ +S ++S G+++++++ P ++ E + ++ +Q V + E
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG---------GQVFFRQRVSS----E 262
Query: 350 VRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTM 392
+ L R CL P RP+ E+ Q H QD +
Sbjct: 263 CQHLIRW---CLALRPSDRPTFEEI--------QNHPWMQDVL 294
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 45/283 (15%)
Query: 124 ILGQGAFGPVYKATMPSGGV-AAIKVLASD--SHQGE----KEFQTEVSLLGRLH--HRN 174
+LG G FG VY S + AIK + D S GE EV LL ++
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
++ L+ + ++LI E +E L E + + + H
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 130
Query: 235 VPPVIHRDLKSANILLD-HFMRAKVADFG---LSKEEVFDGRNSGLKGTYGYIDPAYIST 290
V +HRD+K NIL+D + K+ DFG L K+ V+ + GT Y P +I
Sbjct: 131 V---LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRY 183
Query: 291 NKFTMKS-DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE 349
+++ +S ++S G+++++++ P ++ E + ++ +Q V + E
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG---------GQVFFRQRVSS----E 230
Query: 350 VRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTM 392
+ L R CL P RP+ E+ Q H QD +
Sbjct: 231 CQHLIRW---CLALRPSDRPTFEEI--------QNHPWMQDVL 262
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 45/283 (15%)
Query: 124 ILGQGAFGPVYKATMPSGGV-AAIKVLASD--SHQGE----KEFQTEVSLLGRLH--HRN 174
+LG G FG VY S + AIK + D S GE EV LL ++
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
++ L+ + ++LI E +E L E + + + H
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 177
Query: 235 VPPVIHRDLKSANILLD-HFMRAKVADFG---LSKEEVFDGRNSGLKGTYGYIDPAYIST 290
V +HRD+K NIL+D + K+ DFG L K+ V+ + GT Y P +I
Sbjct: 178 V---LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRY 230
Query: 291 NKFTMKS-DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE 349
+++ +S ++S G+++++++ P ++ E + ++ +Q V + E
Sbjct: 231 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR---------GQVFFRQRVSS----E 277
Query: 350 VRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTM 392
+ L R CL P RP+ E+ Q H QD +
Sbjct: 278 CQHLIRW---CLALRPSDRPTFEEI--------QNHPWMQDVL 309
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 45/283 (15%)
Query: 124 ILGQGAFGPVYKATMPSGGV-AAIKVLASD--SHQGE----KEFQTEVSLLGRLH--HRN 174
+LG G FG VY S + AIK + D S GE EV LL ++
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
++ L+ + ++LI E +E L E + + + H
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 133
Query: 235 VPPVIHRDLKSANILLD-HFMRAKVADFG---LSKEEVFDGRNSGLKGTYGYIDPAYIST 290
V +HRD+K NIL+D + K+ DFG L K+ V+ + GT Y P +I
Sbjct: 134 V---LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRY 186
Query: 291 NKFTMKS-DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE 349
+++ +S ++S G+++++++ P ++ E + ++ +Q V + E
Sbjct: 187 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR---------GQVFFRQRVSS----E 233
Query: 350 VRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTM 392
+ L R CL P RP+ E+ Q H QD +
Sbjct: 234 CQHLIRW---CLALRPSDRPTFEEI--------QNHPWMQDVL 265
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 120/300 (40%), Gaps = 45/300 (15%)
Query: 107 PRYAYKDIQKATQNFTNILGQGAFGPVYKATMPSGGVA-AIKVLASD--SHQGE----KE 159
P K+ ++ +LG G FG VY S + AIK + D S GE
Sbjct: 21 PHMKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR 80
Query: 160 FQTEVSLLGRLH--HRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERL 217
EV LL ++ ++ L+ + ++LI E +E L E
Sbjct: 81 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR 140
Query: 218 QIALDISHGIEYLHEGAVPPVIHRDLKSANILLD-HFMRAKVADFG---LSKEEVFDGRN 273
+ + + H V +HRD+K NIL+D + K+ DFG L K+ V+
Sbjct: 141 SFFWQVLEAVRHCHNCGV---LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---- 193
Query: 274 SGLKGTYGYIDPAYISTNKFTMKS-DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDG 332
+ GT Y P +I +++ +S ++S G+++++++ P ++ E +
Sbjct: 194 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR-------- 245
Query: 333 VDEILDKQLVGACNIQEVRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTM 392
++ +Q V E + L R CL P RP+ E+ Q H QD +
Sbjct: 246 -GQVFFRQRVSX----ECQHLIRW---CLALRPSDRPTFEEI--------QNHPWMQDVL 289
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 19/207 (9%)
Query: 114 IQKATQNFTNILGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLG 168
+ K QN I G GA G V Y A + AIK L+ + K E+ L+
Sbjct: 22 VLKRYQNLKPI-GSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 169 RLHHRNLVNLIGYCVDKG---KYMLIYEFMS--NGSLSNLIYSEERVLNWEERLQIALDI 223
++H+N++ L+ + ++ +Y M + +LS +I E L+ E + +
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLLYQM 135
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYI 283
GI++LH + IHRDLK +NI++ K+ DFGL++ + T Y
Sbjct: 136 LCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 284 DPAYISTNKFTMKSDIFSFGVIIFELI 310
P I + DI+S G I+ E+I
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 45/283 (15%)
Query: 124 ILGQGAFGPVYKATMPSGGVA-AIKVLASD--SHQGE----KEFQTEVSLLGRLH--HRN 174
+LG G FG VY S + AIK + D S GE EV LL ++
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
++ L+ + ++LI E +E L E + + + H
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 235 VPPVIHRDLKSANILLD-HFMRAKVADFG---LSKEEVFDGRNSGLKGTYGYIDPAYIST 290
V +HRD+K NIL+D + K+ DFG L K+ V+ + GT Y P +I
Sbjct: 164 V---LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRY 216
Query: 291 NKFTMKS-DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE 349
+++ +S ++S G+++++++ P ++ E + ++ +Q V + E
Sbjct: 217 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG---------GQVFFRQRVSS----E 263
Query: 350 VRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTM 392
+ L R CL P RP+ E+ Q H QD +
Sbjct: 264 CQHLIRW---CLALRPSDRPTFEEI--------QNHPWMQDVL 295
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 114 IQKATQNFTNILGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLG 168
+ K QN I G GA G V Y A + AIK L+ + K E+ L+
Sbjct: 22 VLKRYQNLKPI-GSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 169 RLHHRNLVNLIGYCVDKGKY------MLIYEFMSNGSLSNLIYSEERVLNWEERLQIALD 222
++H+N+++L+ + L+ E M + +L +I E L+ E +
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME---LDHERMSYLLYQ 134
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+ GI++LH + IHRDLK +NI++ K+ DFGL++ + T Y
Sbjct: 135 MLCGIKHLHSAGI---IHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYY 191
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELI 310
P I + DI+S G I+ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 114 IQKATQNFTNILGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLG 168
+ K QN I G GA G V Y A + AIK L+ + K E+ L+
Sbjct: 22 VLKRYQNLKPI-GSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 169 RLHHRNLVNLIGYCVDKGKY------MLIYEFMSNGSLSNLIYSEERVLNWEERLQIALD 222
++H+N+++L+ + L+ E M + +L +I E L+ E +
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQ 134
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+ GI++LH + IHRDLK +NI++ K+ DFGL++ + T Y
Sbjct: 135 MLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY 191
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELI 310
P I + DI+S G I+ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 45/283 (15%)
Query: 124 ILGQGAFGPVYKATMPSGGVA-AIKVLASD--SHQGE----KEFQTEVSLLGRLH--HRN 174
+LG G FG VY S + AIK + D S GE EV LL ++
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
++ L+ + ++LI E +E L E + + + H
Sbjct: 110 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 169
Query: 235 VPPVIHRDLKSANILLD-HFMRAKVADFG---LSKEEVFDGRNSGLKGTYGYIDPAYIST 290
V +HRD+K NIL+D + K+ DFG L K+ V+ + GT Y P +I
Sbjct: 170 V---LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRY 222
Query: 291 NKFTMKS-DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE 349
+++ +S ++S G+++++++ P ++ E + ++ +Q V + E
Sbjct: 223 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR---------GQVFFRQRVSS----E 269
Query: 350 VRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTM 392
+ L R CL P RP+ E+ Q H QD +
Sbjct: 270 CQHLIRW---CLALRPSDRPTFEEI--------QNHPWMQDVL 301
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 114 IQKATQNFTNILGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLG 168
+ K QN I G GA G V Y A + AIK L+ + K E+ L+
Sbjct: 22 VLKRYQNLKPI-GSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 169 RLHHRNLVNLIGYCVDKGKY------MLIYEFMSNGSLSNLIYSEERVLNWEERLQIALD 222
++H+N+++L+ + L+ E M + +L +I E L+ E +
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME---LDHERMSYLLYQ 134
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+ GI++LH + IHRDLK +NI++ K+ DFGL++ + T Y
Sbjct: 135 MLXGIKHLHSAGI---IHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYY 191
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELI 310
P I + DI+S G I+ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 114 IQKATQNFTNILGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLG 168
+ K QN I G GA G V Y A + AIK L+ + K E+ L+
Sbjct: 21 VLKRYQNLKPI-GSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 77
Query: 169 RLHHRNLVNLIGYCVDKGKY------MLIYEFMSNGSLSNLIYSEERVLNWEERLQIALD 222
++H+N+++L+ + L+ E M + +L +I E L+ E +
Sbjct: 78 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQ 133
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+ GI++LH + IHRDLK +NI++ K+ DFGL++ + T Y
Sbjct: 134 MLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY 190
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELI 310
P I + DI+S G I+ E++
Sbjct: 191 RAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 114 IQKATQNFTNILGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLG 168
+ K QN I G GA G V Y A + AIK L+ + K E+ L+
Sbjct: 22 VLKRYQNLKPI-GSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 169 RLHHRNLVNLIGYCVDKGKY------MLIYEFMSNGSLSNLIYSEERVLNWEERLQIALD 222
++H+N+++L+ + L+ E M + +L +I E L+ E +
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQ 134
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+ GI++LH + IHRDLK +NI++ K+ DFGL++ + T Y
Sbjct: 135 MLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY 191
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELI 310
P I + DI+S G I+ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 115/283 (40%), Gaps = 45/283 (15%)
Query: 124 ILGQGAFGPVYKATMPSGGVA-AIKVLASD--SHQGE----KEFQTEVSLLGRLH--HRN 174
+LG G FG VY S + AIK + D S GE EV LL ++
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
++ L+ + ++LI E +E L E + + + H
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 235 VPPVIHRDLKSANILLD-HFMRAKVADFG---LSKEEVFDGRNSGLKGTYGYIDPAYIST 290
V +HRD+K NIL+D + K+ DFG L K+ V+ + GT Y P +I
Sbjct: 151 V---LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRY 203
Query: 291 NKFTMKS-DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE 349
+++ +S ++S G+++++++ P ++ E + ++ +Q V E
Sbjct: 204 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR---------GQVFFRQRVSX----E 250
Query: 350 VRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTM 392
+ L R CL P RP+ E+ Q H QD +
Sbjct: 251 CQHLIRW---CLALRPXDRPTFEEI--------QNHPWMQDVL 282
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 114 IQKATQNFTNILGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLG 168
+ K QN I G GA G V Y A + AIK L+ + K E+ L+
Sbjct: 23 VLKRYQNLKPI-GSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 79
Query: 169 RLHHRNLVNLIGYCVDKGKY------MLIYEFMSNGSLSNLIYSEERVLNWEERLQIALD 222
++H+N+++L+ + L+ E M + +L +I E L+ E +
Sbjct: 80 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQ 135
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+ GI++LH + IHRDLK +NI++ K+ DFGL++ + T Y
Sbjct: 136 MLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY 192
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELI 310
P I + DI+S G I+ E++
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 115/283 (40%), Gaps = 45/283 (15%)
Query: 124 ILGQGAFGPVYKATMPSGGVA-AIKVLASD--SHQGE----KEFQTEVSLLGRLH--HRN 174
+LG G FG VY S + AIK + D S GE EV LL ++
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
++ L+ + ++LI E +E L E + + + H
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 149
Query: 235 VPPVIHRDLKSANILLD-HFMRAKVADFG---LSKEEVFDGRNSGLKGTYGYIDPAYIST 290
V +HRD+K NIL+D + K+ DFG L K+ V+ + GT Y P +I
Sbjct: 150 V---LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRY 202
Query: 291 NKFTMKS-DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE 349
+++ +S ++S G+++++++ P ++ E + ++ +Q V E
Sbjct: 203 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR---------GQVFFRQRVSX----E 249
Query: 350 VRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTM 392
+ L R CL P RP+ E+ Q H QD +
Sbjct: 250 CQHLIRW---CLALRPSDRPTFEEI--------QNHPWMQDVL 281
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 114 IQKATQNFTNILGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLG 168
+ K QN I G GA G V Y A + AIK L+ + K E+ L+
Sbjct: 15 VLKRYQNLKPI-GSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 71
Query: 169 RLHHRNLVNLIGYCVDKGKY------MLIYEFMSNGSLSNLIYSEERVLNWEERLQIALD 222
++H+N+++L+ + L+ E M + +L +I E L+ E +
Sbjct: 72 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQ 127
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+ GI++LH + IHRDLK +NI++ K+ DFGL++ + T Y
Sbjct: 128 MLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY 184
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELI 310
P I + DI+S G I+ E++
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 19/207 (9%)
Query: 114 IQKATQNFTNILGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLG 168
+ K QN I G GA G V Y A + AIK L+ + K E+ L+
Sbjct: 22 VLKRYQNLKPI-GSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 169 RLHHRNLVNLIGYCVDKG---KYMLIYEFMS--NGSLSNLIYSEERVLNWEERLQIALDI 223
++H+N++ L+ + ++ +Y M + +LS +I E L+ E + +
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLLYQM 135
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYI 283
GI++LH + IHRDLK +NI++ K+ DFGL++ + T Y
Sbjct: 136 LCGIKHLHSAGI---IHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 284 DPAYISTNKFTMKSDIFSFGVIIFELI 310
P I + DI+S G I+ E+I
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 114 IQKATQNFTNILGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLG 168
+ K QN I G GA G V Y A + AIK L+ + K E+ L+
Sbjct: 23 VLKRYQNLKPI-GSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 79
Query: 169 RLHHRNLVNLIGYCVDKGKY------MLIYEFMSNGSLSNLIYSEERVLNWEERLQIALD 222
++H+N+++L+ + L+ E M + +L +I E L+ E +
Sbjct: 80 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQ 135
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+ GI++LH + IHRDLK +NI++ K+ DFGL++ + T Y
Sbjct: 136 MLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY 192
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELI 310
P I + DI+S G I+ E++
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 114 IQKATQNFTNILGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLG 168
+ K QN I G GA G V Y A + AIK L+ + K E+ L+
Sbjct: 60 VLKRYQNLKPI-GSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 116
Query: 169 RLHHRNLVNLIGYCVDKGKY------MLIYEFMSNGSLSNLIYSEERVLNWEERLQIALD 222
++H+N+++L+ + L+ E M + +L +I E L+ E +
Sbjct: 117 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQ 172
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+ GI++LH + IHRDLK +NI++ K+ DFGL++ + T Y
Sbjct: 173 MLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY 229
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELI 310
P I + DI+S G I+ E++
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 19/207 (9%)
Query: 114 IQKATQNFTNILGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLG 168
+ K QN I G GA G V Y A + AIK L+ + K E+ L+
Sbjct: 22 VLKRYQNLKPI-GSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 169 RLHHRNLVNLIGYCVDKG---KYMLIYEFMS--NGSLSNLIYSEERVLNWEERLQIALDI 223
++H+N++ L+ + ++ +Y M + +LS +I E L+ E + +
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLLYQM 135
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYI 283
GI++LH + IHRDLK +NI++ K+ DFGL++ + T Y
Sbjct: 136 LVGIKHLHSAGI---IHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 284 DPAYISTNKFTMKSDIFSFGVIIFELI 310
P I + DI+S G I+ E+I
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 114 IQKATQNFTNILGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLG 168
+ K QN I G GA G V Y A + AIK L+ + K E+ L+
Sbjct: 60 VLKRYQNLKPI-GSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 116
Query: 169 RLHHRNLVNLIGYCVDKGKY------MLIYEFMSNGSLSNLIYSEERVLNWEERLQIALD 222
++H+N+++L+ + L+ E M + +L +I E L+ E +
Sbjct: 117 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQ 172
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+ GI++LH + IHRDLK +NI++ K+ DFGL++ + T Y
Sbjct: 173 MLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY 229
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELI 310
P I + DI+S G I+ E++
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 114 IQKATQNFTNILGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLG 168
+ K QN I G GA G V Y A + AIK L+ + K E+ L+
Sbjct: 16 VLKRYQNLKPI-GSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 72
Query: 169 RLHHRNLVNLIGYCVDKGKY------MLIYEFMSNGSLSNLIYSEERVLNWEERLQIALD 222
++H+N+++L+ + L+ E M + +L +I E L+ E +
Sbjct: 73 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQ 128
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+ GI++LH + IHRDLK +NI++ K+ DFGL++ + T Y
Sbjct: 129 MLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY 185
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELI 310
P I + DI+S G I+ E++
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 114 IQKATQNFTNILGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLG 168
+ K QN I G GA G V Y A + AIK L+ + K E+ L+
Sbjct: 16 VLKRYQNLKPI-GSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 72
Query: 169 RLHHRNLVNLIGYCVDKGKY------MLIYEFMSNGSLSNLIYSEERVLNWEERLQIALD 222
++H+N+++L+ + L+ E M + +L +I E L+ E +
Sbjct: 73 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQME---LDHERMSYLLYQ 128
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+ GI++LH + IHRDLK +NI++ K+ DFGL++ + T Y
Sbjct: 129 MLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY 185
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELI 310
P I + DI+S G I+ E++
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 19/207 (9%)
Query: 114 IQKATQNFTNILGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLG 168
+ K QN I G GA G V Y A + AIK L+ + K E+ L+
Sbjct: 22 VLKRYQNLKPI-GSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 169 RLHHRNLVNLIGYCVDKG---KYMLIYEFMS--NGSLSNLIYSEERVLNWEERLQIALDI 223
++H+N++ L+ + ++ +Y M + +LS +I E L+ E + +
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLLYQM 135
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYI 283
GI++LH + IHRDLK +NI++ K+ DFGL++ + T Y
Sbjct: 136 LCGIKHLHSAGI---IHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 284 DPAYISTNKFTMKSDIFSFGVIIFELI 310
P I + DI+S G I+ E+I
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 115/283 (40%), Gaps = 45/283 (15%)
Query: 124 ILGQGAFGPVYKATMPSGGVA-AIKVLASD--SHQGE----KEFQTEVSLLGRLH--HRN 174
+LG G FG VY S + AIK + D S GE EV LL ++
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
++ L+ + ++LI E +E L E + + + H
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 235 VPPVIHRDLKSANILLD-HFMRAKVADFG---LSKEEVFDGRNSGLKGTYGYIDPAYIST 290
V +HRD+K NIL+D + K+ DFG L K+ V+ + GT Y P +I
Sbjct: 151 V---LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRY 203
Query: 291 NKFTMKS-DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE 349
+++ +S ++S G+++++++ P ++ E + ++ +Q V E
Sbjct: 204 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR---------GQVFFRQRVSX----E 250
Query: 350 VRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTM 392
+ L R CL P RP+ E+ Q H QD +
Sbjct: 251 CQHLIRW---CLALRPSDRPTFEEI--------QNHPWMQDVL 282
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 11/198 (5%)
Query: 123 NILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGY 181
N +G+G++G V A + A K + + F+ E+ ++ L H N++ L
Sbjct: 15 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYET 74
Query: 182 CVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHR 241
D L+ E + G L + +RV + +I D+ + Y H+ V HR
Sbjct: 75 FEDNTDIYLVMELCTGGELFERVV-HKRVFRESDAARIMKDVLSAVAYCHKLN---VAHR 130
Query: 242 DLKSANILL---DHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYISTNKFTMKS 297
DLK N L K+ DFGL+ G+ K GT Y+ P + + +
Sbjct: 131 DLKPENFLFLTDSPDSPLKLIDFGLAA-RFKPGKMMRTKVGTPYYVSPQVLE-GLYGPEC 188
Query: 298 DIFSFGVIIFELITAIHP 315
D +S GV+++ L+ P
Sbjct: 189 DEWSAGVMMYVLLCGYPP 206
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 114 IQKATQNFTNILGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLG 168
+ K QN I G GA G V Y A + AIK L+ + K E+ L+
Sbjct: 15 VLKRYQNLKPI-GSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRELVLMK 71
Query: 169 RLHHRNLVNLIGYCVDKGKY------MLIYEFMSNGSLSNLIYSEERVLNWEERLQIALD 222
++H+N+++L+ + L+ E M + +L +I E L+ E +
Sbjct: 72 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQME---LDHERMSYLLYQ 127
Query: 223 ISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGY 282
+ GI++LH + IHRDLK +NI++ K+ DFGL++ + T Y
Sbjct: 128 MLXGIKHLHSAGI---IHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYY 184
Query: 283 IDPAYISTNKFTMKSDIFSFGVIIFELI 310
P I + DI+S G I+ E++
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 115/283 (40%), Gaps = 45/283 (15%)
Query: 124 ILGQGAFGPVYKATMPSGGVA-AIKVLASD--SHQGE----KEFQTEVSLLGRLH--HRN 174
+LG G FG VY S + AIK + D S GE EV LL ++
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
++ L+ + ++LI E +E L E + + + H
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 235 VPPVIHRDLKSANILLD-HFMRAKVADFG---LSKEEVFDGRNSGLKGTYGYIDPAYIST 290
V +HRD+K NIL+D + K+ DFG L K+ V+ + GT Y P +I
Sbjct: 164 V---LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRY 216
Query: 291 NKFTMKS-DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE 349
+++ +S ++S G+++++++ P ++ E + ++ +Q V E
Sbjct: 217 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG---------GQVFFRQRVSX----E 263
Query: 350 VRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTM 392
+ L R CL P RP+ E+ Q H QD +
Sbjct: 264 CQHLIRW---CLALRPSDRPTFEEI--------QNHPWMQDVL 295
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 115/283 (40%), Gaps = 45/283 (15%)
Query: 124 ILGQGAFGPVYKATMPSGGV-AAIKVLASD--SHQGE----KEFQTEVSLLGRLH--HRN 174
+LG G FG VY S + AIK + D S GE EV LL ++
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
++ L+ + ++LI E +E L E + + + H
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNXG 130
Query: 235 VPPVIHRDLKSANILLD-HFMRAKVADFG---LSKEEVFDGRNSGLKGTYGYIDPAYIST 290
V +HRD+K NIL+D + K+ DFG L K+ V+ + GT Y P +I
Sbjct: 131 V---LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRY 183
Query: 291 NKFTMKS-DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE 349
+++ +S ++S G+++++++ P ++ E + ++ +Q V E
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR---------GQVFFRQRVSX----E 230
Query: 350 VRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTM 392
+ L R CL P RP+ E+ Q H QD +
Sbjct: 231 CQHLIRW---CLALRPSDRPTFEEI--------QNHPWMQDVL 262
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 115/283 (40%), Gaps = 45/283 (15%)
Query: 124 ILGQGAFGPVYKATMPSGGV-AAIKVLASD--SHQGE----KEFQTEVSLLGRLH--HRN 174
+LG G FG VY S + AIK + D S GE EV LL ++
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
++ L+ + ++LI E +E L E + + + H
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 235 VPPVIHRDLKSANILLD-HFMRAKVADFG---LSKEEVFDGRNSGLKGTYGYIDPAYIST 290
V +HRD+K NIL+D + K+ DFG L K+ V+ + GT Y P +I
Sbjct: 164 V---LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRY 216
Query: 291 NKFTMKS-DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE 349
+++ +S ++S G+++++++ P ++ E + ++ +Q V E
Sbjct: 217 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG---------GQVFFRQRVSX----E 263
Query: 350 VRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTM 392
+ L R CL P RP+ E+ Q H QD +
Sbjct: 264 CQHLIRW---CLALRPSDRPTFEEI--------QNHPWMQDVL 295
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 115/272 (42%), Gaps = 65/272 (23%)
Query: 125 LGQGAFGPVYKAT-MPSGGVAAIKVLASD-----SHQGEKEFQTEVSLLGRLHHRNLVNL 178
+GQG++G V A + + AIK++ + + + + +TEV L+ +LHH N+ L
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 179 IGYCVDKGKYMLIYEFMSNGSLSNLI-------------------------YSEERV--- 210
D+ L+ E G L + + +EE +
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 211 -------LNWEERLQIALDISHGI----EYLHEGAVPPVIHRDLKSANILL--DHFMRAK 257
L++ +R ++ +I I YLH + HRD+K N L + K
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGI---CHRDIKPENFLFSTNKSFEIK 210
Query: 258 VADFGLSKE--EVFDGRNSGLK---GTYGYIDPAYISTNK--FTMKSDIFSFGVIIFELI 310
+ DFGLSKE ++ +G G+ GT ++ P ++T + K D +S GV++ L+
Sbjct: 211 LVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLL 270
Query: 311 TAIHPHQNLMEYVNLASMSQDGVDEILDKQLV 342
P VN A D + ++L+K+L
Sbjct: 271 MGAVPFPG----VNDA----DTISQVLNKKLC 294
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 115/283 (40%), Gaps = 45/283 (15%)
Query: 124 ILGQGAFGPVYKATMPSGGVA-AIKVLASD--SHQGE----KEFQTEVSLLGRLH--HRN 174
+LG G FG VY S + AIK + D S GE EV LL ++
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
++ L+ + ++LI E +E L E + + + H
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 235 VPPVIHRDLKSANILLD-HFMRAKVADFG---LSKEEVFDGRNSGLKGTYGYIDPAYIST 290
V +HRD+K NIL+D + K+ DFG L K+ V+ + GT Y P +I
Sbjct: 163 V---LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRY 215
Query: 291 NKFTMKS-DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE 349
+++ +S ++S G+++++++ P ++ E + ++ +Q V E
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIG---------GQVFFRQRVSX----E 262
Query: 350 VRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTM 392
+ L R CL P RP+ E+ Q H QD +
Sbjct: 263 CQHLIRW---CLALRPSDRPTFEEI--------QNHPWMQDVL 294
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 28/223 (12%)
Query: 112 KDIQKATQNF--TNILGQGAFGPVYKATMPSGG-VAAIKVLASDSHQGEKE---FQTEVS 165
K++Q ++F ++G+GAFG V M + + A+K+L E F+ E
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 126
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLI------YSEERVLNWEERLQI 219
+L + + L D+ L+ ++ G L L+ E+ + + +
Sbjct: 127 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVL 186
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG--RNSGLK 277
A+D H + Y +HRD+K N+LLD ++ADFG + DG ++S
Sbjct: 187 AIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV 237
Query: 278 GTYGYIDPAYIST-----NKFTMKSDIFSFGVIIFELITAIHP 315
GT YI P + K+ + D +S GV ++E++ P
Sbjct: 238 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 84/198 (42%), Gaps = 11/198 (5%)
Query: 123 NILGQGAFGPVYKATMPSGGVA-AIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGY 181
N +G+G++G V A + A K + + F+ E+ ++ L H N++ L
Sbjct: 32 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYET 91
Query: 182 CVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIHR 241
D L+ E + G L + +RV + +I D+ + Y H+ V HR
Sbjct: 92 FEDNTDIYLVMELCTGGELFERVV-HKRVFRESDAARIMKDVLSAVAYCHKLN---VAHR 147
Query: 242 DLKSANILL---DHFMRAKVADFGLSKEEVFDGRNSGLK-GTYGYIDPAYISTNKFTMKS 297
DLK N L K+ DFGL+ G+ K GT Y+ P + + +
Sbjct: 148 DLKPENFLFLTDSPDSPLKLIDFGLAA-RFKPGKMMRTKVGTPYYVSPQVLE-GLYGPEC 205
Query: 298 DIFSFGVIIFELITAIHP 315
D +S GV+++ L+ P
Sbjct: 206 DEWSAGVMMYVLLCGYPP 223
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 115/283 (40%), Gaps = 45/283 (15%)
Query: 124 ILGQGAFGPVYKATMPSGGVA-AIKVLASD--SHQGE----KEFQTEVSLLGRLH--HRN 174
+LG G FG VY S + AIK + D S GE EV LL ++
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
++ L+ + ++LI E +E L E + + + H
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 177
Query: 235 VPPVIHRDLKSANILLD-HFMRAKVADFG---LSKEEVFDGRNSGLKGTYGYIDPAYIST 290
V +HRD+K NIL+D + K+ DFG L K+ V+ + GT Y P +I
Sbjct: 178 V---LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRY 230
Query: 291 NKFTMKS-DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE 349
+++ +S ++S G+++++++ P ++ E + ++ +Q V E
Sbjct: 231 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR---------GQVFFRQRVSX----E 277
Query: 350 VRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTM 392
+ L R CL P RP+ E+ Q H QD +
Sbjct: 278 CQHLIRW---CLALRPSDRPTFEEI--------QNHPWMQDVL 309
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 115/283 (40%), Gaps = 45/283 (15%)
Query: 124 ILGQGAFGPVYKATMPSGGVA-AIKVLASD--SHQGE----KEFQTEVSLLGRLH--HRN 174
+LG G FG VY S + AIK + D S GE EV LL ++
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 175 LVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGA 234
++ L+ + ++LI E +E L E + + + H
Sbjct: 123 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 182
Query: 235 VPPVIHRDLKSANILLD-HFMRAKVADFG---LSKEEVFDGRNSGLKGTYGYIDPAYIST 290
V +HRD+K NIL+D + K+ DFG L K+ V+ + GT Y P +I
Sbjct: 183 V---LHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRY 235
Query: 291 NKFTMKS-DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACNIQE 349
+++ +S ++S G+++++++ P ++ E + ++ +Q V E
Sbjct: 236 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR---------GQVFFRQRVSX----E 282
Query: 350 VRELARIGHKCLHKTPRKRPSIGEVTQALLKIKQRHLAKQDTM 392
+ L R CL P RP+ E+ Q H QD +
Sbjct: 283 CQHLIRW---CLALRPSDRPTFEEI--------QNHPWMQDVL 314
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 28/223 (12%)
Query: 112 KDIQKATQNF--TNILGQGAFGPVYKATMPSGG-VAAIKVLASDSHQGEKE---FQTEVS 165
K++Q ++F ++G+GAFG V M + + A+K+L E F+ E
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 142
Query: 166 LLGRLHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLI------YSEERVLNWEERLQI 219
+L + + L D+ L+ ++ G L L+ E+ + + +
Sbjct: 143 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVL 202
Query: 220 ALDISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG--RNSGLK 277
A+D H + Y +HRD+K N+LLD ++ADFG + DG ++S
Sbjct: 203 AIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV 253
Query: 278 GTYGYIDPAYIST-----NKFTMKSDIFSFGVIIFELITAIHP 315
GT YI P + K+ + D +S GV ++E++ P
Sbjct: 254 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 114 IQKATQNFTNILGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLG 168
+ K QN I G GA G V Y A + AIK L+ + K E+ L+
Sbjct: 22 VLKRYQNLKPI-GSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 169 RLHHRNLVNLIGYCVDKG---KYMLIYEFMS--NGSLSNLIYSEERVLNWEERLQIALDI 223
++H+N++ L+ + ++ +Y M + +L +I E L+ E + +
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQM 135
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYI 283
GI++LH + IHRDLK +NI++ K+ DFGL++ + T Y
Sbjct: 136 LCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 284 DPAYISTNKFTMKSDIFSFGVIIFELI 310
P I + DI+S G I+ E+I
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 33/212 (15%)
Query: 125 LGQGAFGPVYKATMPSGG--VAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNL---- 178
LG G G V+ A VA K++ +D Q K E+ ++ RL H N+V +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDP-QSVKHALREIKIIRRLDHDNIVKVFEIL 77
Query: 179 ----------IGYCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIE 228
+G + ++ E+M L+N++ E+ L E + G++
Sbjct: 78 GPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVL--EQGPLLEEHARLFMYQLLRGLK 134
Query: 229 YLHEGAVPPVIHRDLKSANILLD-HFMRAKVADFGLSKEEVFDGRNS-------GLKGTY 280
Y+H V+HRDLK AN+ ++ + K+ DFGL++ + D S GL +
Sbjct: 135 YIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLAR--IMDPHYSHKGHLSEGLVTKW 189
Query: 281 GYIDPAYISTNKFTMKSDIFSFGVIIFELITA 312
+S N +T D+++ G I E++T
Sbjct: 190 YRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG 221
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 114/268 (42%), Gaps = 31/268 (11%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKV--LASDSHQGEKEFQTEVSLLGRL--HHRNLVNLIG 180
+G G V++ + AIK L +Q ++ E++ L +L H ++ L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
Y + +Y+ + N L++ + ++ + WE R ++ + +H+ + +H
Sbjct: 124 YEI-TDQYIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQHGI---VH 178
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRN---SGLKGTYGYIDPAYISTNKFTMKS 297
DLK AN L+ M K+ DFG++ + D + GT Y+ P I + ++
Sbjct: 179 SDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 237
Query: 298 -----------DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACN 346
D++S G I++ + P Q ++ ++ D EI +
Sbjct: 238 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI------EFPD 291
Query: 347 IQEVRELARIGHKCLHKTPRKRPSIGEV 374
I E ++L + CL + P++R SI E+
Sbjct: 292 IPE-KDLQDVLKCCLKRDPKQRISIPEL 318
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 114 IQKATQNFTNILGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLG 168
+ K QN I G GA G V Y A + AIK L+ + K E+ L+
Sbjct: 23 VLKRYQNLKPI-GSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK 79
Query: 169 RLHHRNLVNLIGYCVDKG---KYMLIYEFMS--NGSLSNLIYSEERVLNWEERLQIALDI 223
++H+N++ L+ + ++ +Y M + +L +I E L+ E + +
Sbjct: 80 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQM 136
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYI 283
GI++LH + IHRDLK +NI++ K+ DFGL++ + T Y
Sbjct: 137 LCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 193
Query: 284 DPAYISTNKFTMKSDIFSFGVIIFELI 310
P I + DI+S G I+ E+I
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMI 220
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 93/227 (40%), Gaps = 37/227 (16%)
Query: 124 ILGQGAFGPVY----KATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNLI 179
++G+G++G VY K T + + + + D K E+++L RL ++ L
Sbjct: 33 LIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDC-KRILREITILNRLKSDYIIRLY 91
Query: 180 GYCV--DKGKYMLIYEFM--SNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAV 235
+ D K+ +Y + ++ L L + L E I ++ G ++HE +
Sbjct: 92 DLIIPDDLLKFDELYIVLEIADSDLKKL-FKTPIFLTEEHIKTILYNLLLGENFIHESGI 150
Query: 236 PPVIHRDLKSANILLDHFMRAKVADFGLSK----------------EEVFDGRNSGLKG- 278
IHRDLK AN LL+ KV DFGL++ E N LK
Sbjct: 151 ---IHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQ 207
Query: 279 ------TYGYIDPAYISTNK-FTMKSDIFSFGVIIFELITAIHPHQN 318
T Y P I + +T DI+S G I EL+ + H N
Sbjct: 208 LTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIN 254
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 114 IQKATQNFTNILGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLG 168
+ K QN I G GA G V Y A + AIK L+ + K E+ L+
Sbjct: 22 VLKRYQNLKPI-GSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 169 RLHHRNLVNLIGYCVDKG---KYMLIYEFMS--NGSLSNLIYSEERVLNWEERLQIALDI 223
++H+N++ L+ + ++ +Y M + +L +I E L+ E + +
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQM 135
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYI 283
GI++LH + IHRDLK +NI++ K+ DFGL++ + T Y
Sbjct: 136 LCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 284 DPAYISTNKFTMKSDIFSFGVIIFELI 310
P I + DI+S G I+ E+I
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 114/268 (42%), Gaps = 31/268 (11%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKV--LASDSHQGEKEFQTEVSLLGRL--HHRNLVNLIG 180
+G G V++ + AIK L +Q ++ E++ L +L H ++ L
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
Y + +Y+ + N L++ + ++ + WE R ++ + +H+ + +H
Sbjct: 80 YEI-TDQYIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQHGI---VH 134
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRN---SGLKGTYGYIDPAYISTNKFTMKS 297
DLK AN L+ M K+ DFG++ + D + GT Y+ P I + ++
Sbjct: 135 SDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 193
Query: 298 -----------DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACN 346
D++S G I++ + P Q ++ ++ D EI +
Sbjct: 194 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI------EFPD 247
Query: 347 IQEVRELARIGHKCLHKTPRKRPSIGEV 374
I E ++L + CL + P++R SI E+
Sbjct: 248 IPE-KDLQDVLKCCLKRDPKQRISIPEL 274
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 114/268 (42%), Gaps = 31/268 (11%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKV--LASDSHQGEKEFQTEVSLLGRL--HHRNLVNLIG 180
+G G V++ + AIK L +Q ++ E++ L +L H ++ L
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
Y + +Y+ + N L++ + ++ + WE R ++ + +H+ + +H
Sbjct: 96 YEI-TDQYIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQHGI---VH 150
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRN---SGLKGTYGYIDPAYISTNKFTMKS 297
DLK AN L+ M K+ DFG++ + D + GT Y+ P I + ++
Sbjct: 151 SDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 209
Query: 298 -----------DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACN 346
D++S G I++ + P Q ++ ++ D EI +
Sbjct: 210 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI------EFPD 263
Query: 347 IQEVRELARIGHKCLHKTPRKRPSIGEV 374
I E ++L + CL + P++R SI E+
Sbjct: 264 IPE-KDLQDVLKCCLKRDPKQRISIPEL 290
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 19/207 (9%)
Query: 114 IQKATQNFTNILGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLG 168
+ K QN I G GA G V Y A + AIK L+ + K E+ L+
Sbjct: 24 VLKRYQNLKPI-GSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK 80
Query: 169 RLHHRNLVNLIGYCVDKG---KYMLIYEFMS--NGSLSNLIYSEERVLNWEERLQIALDI 223
++H+N++ L+ + ++ +Y M + +L +I E L+ E + +
Sbjct: 81 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQM 137
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYI 283
GI++LH + IHRDLK +NI++ K+ DFGL++ T Y
Sbjct: 138 LCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYR 194
Query: 284 DPAYISTNKFTMKSDIFSFGVIIFELI 310
P I + DI+S G I+ E+I
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMI 221
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 117/269 (43%), Gaps = 33/269 (12%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKV--LASDSHQGEKEFQTEVSLLGRL--HHRNLVNLIG 180
+G G V++ + AIK L +Q ++ E++ L +L H ++ L
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
Y + +Y+ + N L++ + ++ + WE R ++ + +H+ + +H
Sbjct: 77 YEI-TDQYIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQHGI---VH 131
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDG----RNSGLKGTYGYIDPAYISTNKFTMK 296
DLK AN L+ M K+ DFG++ + D ++S + GT Y+ P I + +
Sbjct: 132 SDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPEAIKDMSSSRE 189
Query: 297 S-----------DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGAC 345
+ D++S G I++ + P Q ++ ++ D EI
Sbjct: 190 NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI------EFP 243
Query: 346 NIQEVRELARIGHKCLHKTPRKRPSIGEV 374
+I E ++L + CL + P++R SI E+
Sbjct: 244 DIPE-KDLQDVLKCCLKRDPKQRISIPEL 271
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 114/268 (42%), Gaps = 31/268 (11%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKV--LASDSHQGEKEFQTEVSLLGRL--HHRNLVNLIG 180
+G G V++ + AIK L +Q ++ E++ L +L H ++ L
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
Y + +Y+ + N L++ + ++ + WE R ++ + +H+ + +H
Sbjct: 76 YEI-TDQYIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQHGI---VH 130
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDGRN---SGLKGTYGYIDPAYISTNKFTMKS 297
DLK AN L+ M K+ DFG++ + D + GT Y+ P I + ++
Sbjct: 131 SDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 189
Query: 298 -----------DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGACN 346
D++S G I++ + P Q ++ ++ D EI +
Sbjct: 190 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI------EFPD 243
Query: 347 IQEVRELARIGHKCLHKTPRKRPSIGEV 374
I E ++L + CL + P++R SI E+
Sbjct: 244 IPE-KDLQDVLKCCLKRDPKQRISIPEL 270
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 117/269 (43%), Gaps = 33/269 (12%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKV--LASDSHQGEKEFQTEVSLLGRL--HHRNLVNLIG 180
+G G V++ + AIK L +Q ++ E++ L +L H ++ L
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
Y + +Y+ + N L++ + ++ + WE R ++ + +H+ + +H
Sbjct: 96 YEI-TDQYIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQHGI---VH 150
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDG----RNSGLKGTYGYIDPAYISTNKFTMK 296
DLK AN L+ M K+ DFG++ + D ++S + GT Y+ P I + +
Sbjct: 151 SDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQV-GTVNYMPPEAIKDMSSSRE 208
Query: 297 S-----------DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGAC 345
+ D++S G I++ + P Q ++ ++ D EI
Sbjct: 209 NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI------EFP 262
Query: 346 NIQEVRELARIGHKCLHKTPRKRPSIGEV 374
+I E ++L + CL + P++R SI E+
Sbjct: 263 DIPE-KDLQDVLKCCLKRDPKQRISIPEL 290
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 114 IQKATQNFTNILGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLG 168
+ K QN I G GA G V Y A + AIK L+ + K E+ L+
Sbjct: 22 VLKRYQNLKPI-GSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 169 RLHHRNLVNLIGYCVDKG---KYMLIYEFMS--NGSLSNLIYSEERVLNWEERLQIALDI 223
++H+N++ L+ + ++ +Y M + +L +I E L+ E + +
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQM 135
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYI 283
GI++LH + IHRDLK +NI++ K+ DFGL++ + T Y
Sbjct: 136 LCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYR 192
Query: 284 DPAYISTNKFTMKSDIFSFGVIIFELI 310
P I + DI+S G I+ E+I
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 117/269 (43%), Gaps = 33/269 (12%)
Query: 125 LGQGAFGPVYKATMPSGGVAAIKV--LASDSHQGEKEFQTEVSLLGRL--HHRNLVNLIG 180
+G G V++ + AIK L +Q ++ E++ L +L H ++ L
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 181 YCVDKGKYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIALDISHGIEYLHEGAVPPVIH 240
Y + +Y+ + N L++ + ++ + WE R ++ + +H+ + +H
Sbjct: 124 YEI-TDQYIYMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQHGI---VH 178
Query: 241 RDLKSANILLDHFMRAKVADFGLSKEEVFDG----RNSGLKGTYGYIDPAYISTNKFTMK 296
DLK AN L+ M K+ DFG++ + D ++S + GT Y+ P I + +
Sbjct: 179 SDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV-GTVNYMPPEAIKDMSSSRE 236
Query: 297 S-----------DIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILDKQLVGAC 345
+ D++S G I++ + P Q ++ ++ D EI
Sbjct: 237 NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI------EFP 290
Query: 346 NIQEVRELARIGHKCLHKTPRKRPSIGEV 374
+I E ++L + CL + P++R SI E+
Sbjct: 291 DIPE-KDLQDVLKCCLKRDPKQRISIPEL 318
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 90/216 (41%), Gaps = 18/216 (8%)
Query: 114 IQKATQNFTNILGQGAFGPVYKATMP-SGGVAAIKVLASDSHQGEKE---FQTEVSLLGR 169
+Q+ ++G+GAF V M +G V A+K++ E F+ E +L
Sbjct: 58 LQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVN 117
Query: 170 LHHRNLVNLIGYCVDKGKYMLIYEFMSNGSLSNLIYS-EERVLNWEERLQIALDISHGIE 228
R + L D+ L+ E+ G L L+ ER+ R +A +I I+
Sbjct: 118 GDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLA-EIVMAID 176
Query: 229 YLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDG--RNSGLKGTYGYIDPA 286
+H +HRD+K NILLD ++ADFG + DG R+ GT Y+ P
Sbjct: 177 SVHRLGY---VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPE 233
Query: 287 YIST-------NKFTMKSDIFSFGVIIFELITAIHP 315
+ + + D ++ GV +E+ P
Sbjct: 234 ILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 91/181 (50%), Gaps = 16/181 (8%)
Query: 94 KDRFTSAPSASGIPRYAYKDIQKATQ-NFTNILGQGAFGPVYKA--TMPSGGVAAIKVL- 149
K +S P+AS +PR + D Q + +++G G++G V +A + VA K+L
Sbjct: 31 KQHHSSKPTAS-MPR-PHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILR 88
Query: 150 ASDSHQGEKEFQTEVSLLGRLHHRNLVNLIGYCVDKG--KYMLIYEFM--SNGSLSNLIY 205
+ K E+++L RL+H ++V ++ + K K+ +Y + ++ L
Sbjct: 89 VFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFR 148
Query: 206 SEERVLNWEERLQIAL-DISHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLS 264
+ V E ++ L ++ G++Y+H + +HRDLK AN L++ KV DFGL+
Sbjct: 149 TP--VYLTELHIKTLLYNLLVGVKYVHSAGI---LHRDLKPANCLVNQDCSVKVCDFGLA 203
Query: 265 K 265
+
Sbjct: 204 R 204
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 114 IQKATQNFTNILGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLG 168
+ K QN I G GA G V Y A + AIK L+ + K E+ L+
Sbjct: 27 VLKRYQNLKPI-GSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK 83
Query: 169 RLHHRNLVNLIGYCVDKG---KYMLIYEFMS--NGSLSNLIYSEERVLNWEERLQIALDI 223
++H+N++ L+ + ++ +Y M + +L +I E L+ E + +
Sbjct: 84 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQM 140
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYI 283
GI++LH + IHRDLK +NI++ K+ DFGL++ + T Y
Sbjct: 141 LCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 197
Query: 284 DPAYISTNKFTMKSDIFSFGVIIFELI 310
P I + D++S G I+ E++
Sbjct: 198 APEVILGMGYKENVDLWSVGCIMGEMV 224
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 114 IQKATQNFTNILGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLG 168
+ K QN I G GA G V Y A + AIK L+ + K E+ L+
Sbjct: 16 VLKRYQNLKPI-GSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK 72
Query: 169 RLHHRNLVNLIGYCVDKG---KYMLIYEFMS--NGSLSNLIYSEERVLNWEERLQIALDI 223
++H+N++ L+ + ++ +Y M + +L +I E L+ E + +
Sbjct: 73 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQM 129
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYI 283
GI++LH + IHRDLK +NI++ K+ DFGL++ + T Y
Sbjct: 130 LCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 186
Query: 284 DPAYISTNKFTMKSDIFSFGVIIFELI 310
P I + D++S G I+ E++
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMV 213
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 118/268 (44%), Gaps = 45/268 (16%)
Query: 121 FTN--ILGQGAFGPVYKATMPSGGVAAIKVLASDSHQGEKEFQTEVSLLGRLHHRNLVNL 178
+TN ++G G+FG V++A + AIK + D +E Q ++ + H N+V+L
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQ----IMRIVKHPNVVDL 97
Query: 179 IGYCVDKGK------YMLIYEFMSNGSLSNLIYSEER-VLNWEERLQIAL------DISH 225
+ G L+ E++ +Y R ++ + + L +
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPET-----VYRASRHYAKLKQTMPMLLIKLYMYQLLR 152
Query: 226 GIEYLHEGAVPPVIHRDLKSANILLDHFMRA-KVADFGLSKEEVFDGRNSGLKGTYGYID 284
+ Y+H + HRD+K N+LLD K+ DFG +K + N + Y
Sbjct: 153 SLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRA 209
Query: 285 PAYI--STNKFTMKSDIFSFGVIIFELITAIHPHQNLMEYVNLASMSQDGVDEILD-KQL 341
P I +TN +T DI+S G ++ EL+ Q L + G+D++++ ++
Sbjct: 210 PELIFGATN-YTTNIDIWSTGCVMAELMQG----QPLFP-------GESGIDQLVEIIKV 257
Query: 342 VGACNIQEVRELARIGHKCLHKTPRKRP 369
+G + ++++ + + HK P+ RP
Sbjct: 258 LGTPSREQIKTMN--PNYMEHKFPQIRP 283
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 19/208 (9%)
Query: 114 IQKATQNFTNILGQGAFGPV---YKATMPSGGVAAIKVLAS--DSHQGEKEFQTEVSLLG 168
+ K QN I G GA G V Y A + AIK L+ + K E+ L+
Sbjct: 22 VLKRYQNLKPI-GSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMK 78
Query: 169 RLHHRNLVNLIGYCVDKG---KYMLIYEFMS--NGSLSNLIYSEERVLNWEERLQIALDI 223
++H+N++ L+ + ++ +Y M + +L +I E L+ E + +
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQM 135
Query: 224 SHGIEYLHEGAVPPVIHRDLKSANILLDHFMRAKVADFGLSKEEVFDGRNSGLKGTYGYI 283
GI++LH + IHRDLK +NI++ K+ DFGL++ T Y
Sbjct: 136 LCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYR 192
Query: 284 DPAYISTNKFTMKSDIFSFGVIIFELIT 311
P I + DI+S G I+ E++
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVC 220
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 44/260 (16%)
Query: 163 EVSLLGRLHHRNLVNLIGYCVDKG--KYMLIYEFMSNGSLSNLIYSEERVLNWEERLQIA 220
E++LL L H N+++L + K L++++ + + + N ++ +Q+
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKAN-KKPVQLP 126
Query: 221 --------LDISHGIEYLHEGAVPPVIHRDLKSANILL----DHFMRAKVADFGLSKEEV 268
I GI YLH V +HRDLK ANIL+ R K+AD G ++ +
Sbjct: 127 RGMVKSLLYQILDGIHYLHANWV---LHRDLKPANILVMGEGPERGRVKIADMGFAR--L 181
Query: 269 FDGRNSGLKG---------TYGYIDPA-YISTNKFTMKSDIFSFGVIIFELITA---IHP 315
F NS LK T+ Y P + +T DI++ G I EL+T+ H
Sbjct: 182 F---NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 238
Query: 316 HQNLMEYVNLASMSQDGVDEILDKQLVGACNIQEVRELARIG-HKCLHKTPRKRPSIGEV 374
Q ++ N D +D I + ++G ++ ++ ++ H L K R+
Sbjct: 239 RQEDIKTSN--PYHHDQLDRIFN--VMGFPADKDWEDIKKMPEHSTLMKDFRRN---TYT 291
Query: 375 TQALLKIKQRHLAKQDTMSF 394
+L+K ++H K D+ +F
Sbjct: 292 NCSLIKYMEKHKVKPDSKAF 311
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,361,622
Number of Sequences: 62578
Number of extensions: 508028
Number of successful extensions: 3752
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 177
Number of HSP's that attempted gapping in prelim test: 1483
Number of HSP's gapped (non-prelim): 1097
length of query: 426
length of database: 14,973,337
effective HSP length: 102
effective length of query: 324
effective length of database: 8,590,381
effective search space: 2783283444
effective search space used: 2783283444
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)