BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014355
(426 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5N643|SYR_SYNP6 Arginine--tRNA ligase OS=Synechococcus sp. (strain ATCC 27144 / PCC
6301 / SAUG 1402/1) GN=argS PE=3 SV=1
Length = 584
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/419 (49%), Positives = 282/419 (67%), Gaps = 25/419 (5%)
Query: 14 ELEKVFDLALKATV-PNETDVRPLIAACT-AKFGDYQCNNAMGLWSKIKGKGTEFKGPQP 71
+L F AL A+ P PL+ T KFGDYQ N AM L ++ + P+
Sbjct: 7 QLRDRFQAALAASFGPEWAATDPLLVPATNPKFGDYQSNVAMSLAKQLG------QPPRA 60
Query: 72 VGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVD---GIETWAPKLRVK 128
+ + +++NL +++ E ++AGPGF+N L +++ +Q++ D GI+ +P RV
Sbjct: 61 IAETLVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQLQQLQTDERLGIQPVSPPQRV- 119
Query: 129 KAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYL 188
+VDFSSPNIAKEMHVGHLRSTIIGDS+AR+LEF EVLR NHVGDWGTQFGMLI +L
Sbjct: 120 --IVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVLRLNHVGDWGTQFGMLIAFL 177
Query: 189 FEKFPNS-EDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQ 247
E++P + + I +L FY+++K RFD DP+F+E A+Q VV LQSGE +AW
Sbjct: 178 QEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETARQRVVDLQSGEATARQAWQL 237
Query: 248 ICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN 307
+C+ SR+EF K+Y RL + LEE+GESFYNPY+P ++++L + GL+ E QGA+ +F+EG
Sbjct: 238 LCDQSRREFQKIYDRLDIQLEERGESFYNPYLPAIVEDLRRLGLLVEDQGAQCVFLEGFQ 297
Query: 308 ------IPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAK 361
+PLI+ KSDGG+NYA+TDLAAL YRL +++A+ IIYVTD GQ HF VF A+
Sbjct: 298 NKEGQPLPLIVQKSDGGYNYATTDLAALRYRLGQDQAQRIIYVTDSGQANHFAQVFQVAQ 357
Query: 362 RAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER 420
RAGWL A + HV FGLV GEDGK+L+TR + VRL DLLDEA +R++ L R
Sbjct: 358 RAGWLPA----AAQIEHVPFGLVQGEDGKKLKTRAGDTVRLRDLLDEAVDRARTDLTTR 412
>sp|Q8KPU9|SYR_SYNE7 Arginine--tRNA ligase OS=Synechococcus elongatus (strain PCC 7942)
GN=argS PE=3 SV=2
Length = 584
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/419 (49%), Positives = 282/419 (67%), Gaps = 25/419 (5%)
Query: 14 ELEKVFDLALKATV-PNETDVRPLIAACT-AKFGDYQCNNAMGLWSKIKGKGTEFKGPQP 71
+L F AL A+ P PL+ T KFGDYQ N AM L ++ + P+
Sbjct: 7 QLRDRFQAALAASFGPEWAATDPLLVPATNPKFGDYQSNVAMSLAKQLG------QPPRA 60
Query: 72 VGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVD---GIETWAPKLRVK 128
+ + +++NL +++ E ++AGPGF+N L +++ +Q++ D GI+ +P RV
Sbjct: 61 IAETLVQNLNLADLCEPPAIAGPGFINFTLQPSYLVAQLQQLQTDERLGIQPVSPPQRV- 119
Query: 129 KAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYL 188
+VDFSSPNIAKEMHVGHLRSTIIGDS+AR+LEF EVLR NHVGDWGTQFGMLI +L
Sbjct: 120 --IVDFSSPNIAKEMHVGHLRSTIIGDSIARVLEFQGHEVLRLNHVGDWGTQFGMLIAFL 177
Query: 189 FEKFPNS-EDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQ 247
E++P + + I +L FY+++K RFD DP+F+E A+Q VV LQSGE +AW
Sbjct: 178 QEQYPQALSQPDALDISDLVAFYKQAKARFDEDPSFQETARQRVVDLQSGEATARQAWQL 237
Query: 248 ICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN 307
+C+ SR+EF K+Y RL + LEE+GESFYNPY+P ++++L + GL+ E QGA+ +F+EG
Sbjct: 238 LCDQSRREFQKIYDRLDIQLEERGESFYNPYLPAIVEDLRRLGLLVEDQGAQCVFLEGFQ 297
Query: 308 ------IPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAK 361
+PLI+ KSDGG+NYA+TDLAAL YRL +++A+ IIYVTD GQ HF VF A+
Sbjct: 298 NKEGQPLPLIVQKSDGGYNYATTDLAALRYRLGQDQAQRIIYVTDSGQANHFAQVFQVAQ 357
Query: 362 RAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER 420
RAGWL A + HV FGLV GEDGK+L+TR + VRL DLLDEA +R++ L R
Sbjct: 358 RAGWLPA----AAQIEHVPFGLVQGEDGKKLKTRAGDTVRLRDLLDEAVDRARTDLTTR 412
>sp|Q8DKN4|SYR_THEEB Arginine--tRNA ligase OS=Thermosynechococcus elongatus (strain
BP-1) GN=argS PE=3 SV=1
Length = 584
Score = 404 bits (1039), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/407 (50%), Positives = 274/407 (67%), Gaps = 18/407 (4%)
Query: 22 ALKATVPNETDVRPL-IAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNL 80
AL+A +P +T +PL + A KFGDYQ N + L ++ K P+ + Q ++ +L
Sbjct: 15 ALQAALPLDTYPQPLLVPASQVKFGDYQSNVCLSLAKQLG------KAPRELAQEVVPHL 68
Query: 81 PPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKLRVKKAVVDFSSPNIA 140
++ + +AGPGF+N L ++A +Q P ++ VVDFSSPNIA
Sbjct: 69 EVEDLCQPVEIAGPGFLNFRLKPEFLAATLQAARGSDRLGIPPAREPRRVVVDFSSPNIA 128
Query: 141 KEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNS-EDAN 199
KEMHVGHLRSTIIGD +AR+LEF VLR NHVGDWGTQFGMLI YL E +P++ AN
Sbjct: 129 KEMHVGHLRSTIIGDCIARILEFQGHTVLRLNHVGDWGTQFGMLIAYLDEVYPDALTTAN 188
Query: 200 ETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKV 259
+G+L FY+++K RFDSDP F+++A+ VV LQ GE + AW +CE SR+EF K+
Sbjct: 189 ALDLGDLVTFYKKAKQRFDSDPEFQQKARAKVVALQQGEEQSRRAWQLLCEQSRREFQKI 248
Query: 260 YKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN------IPLIIV 313
Y L + L E+GESFYNP++P VI++L+ GL+ E QGA+V+F+EG PLII
Sbjct: 249 YDLLDIQLTERGESFYNPFLPAVIEDLAACGLLVEDQGAKVVFLEGFTNKEGQPQPLIIQ 308
Query: 314 KSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTY 373
KSDGG+NYA+TDLAAL YR+++++A+WIIYVTDVGQ HF VF A+RAGW+ +
Sbjct: 309 KSDGGYNYATTDLAALRYRIDKDQADWIIYVTDVGQSTHFAQVFQVAQRAGWVPP----H 364
Query: 374 PKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER 420
+HV FGLVLGEDGKRL+TR E +RL+DLL EA RS+A L +R
Sbjct: 365 VTLTHVPFGLVLGEDGKRLKTRSGETIRLIDLLTEAIARSRADLEQR 411
>sp|Q6P1S4|SYRC_XENTR Arginine--tRNA ligase, cytoplasmic OS=Xenopus tropicalis GN=rars
PE=2 SV=1
Length = 660
Score = 400 bits (1029), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/414 (48%), Positives = 276/414 (66%), Gaps = 9/414 (2%)
Query: 10 NVKRELEKVFDLALKATVPNETDVRPLIAACTA--KFGDYQCNNAMGLWSKIKGKGTEFK 67
N+ +++++F A+ A P E PL + KFGDYQCN+AM + +K +
Sbjct: 75 NINAQIQEIFGTAIGAAYP-ELQNAPLAVTPSQQPKFGDYQCNSAMAITQMLKAMNQKV- 132
Query: 68 GPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKLRV 127
P+ + I+KN+P +E++E +AGPGF+NV L K++ +K I K+LV+G++ R
Sbjct: 133 SPREIADKIVKNIPTNELVEKVDIAGPGFINVHLHKDFTSKQISKLLVNGVQPPVIWER- 191
Query: 128 KKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEY 187
KK VVDFSSPNIAKEMHVGHLRST+IGDS+ R+ EF +VLR NH+GDWGTQFGMLI +
Sbjct: 192 KKVVVDFSSPNIAKEMHVGHLRSTVIGDSICRLFEFVGHDVLRLNHLGDWGTQFGMLIAH 251
Query: 188 LFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQ 247
L +KFP+ + IG+LQ FY+ SK RFD D FK+RA Q VV+LQ+ P + +AW
Sbjct: 252 LQDKFPDYLTVS-PPIGDLQSFYKESKKRFDEDEEFKKRAYQCVVQLQNKTPNFIQAWNL 310
Query: 248 ICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN 307
IC++SRKEF K+Y L + + ++GESFY + GV+ E ++GLV+ +G +V+F G +
Sbjct: 311 ICDVSRKEFQKIYDCLDISIIDRGESFYQDRMIGVVKEFEEKGLVQVDEGRKVVFPPGCS 370
Query: 308 IPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLS 367
+PL IVKSDGGF Y ++DLAAL RL EEKA+ IIYV D GQ +H VFSA + GW
Sbjct: 371 VPLTIVKSDGGFTYDTSDLAALKQRLQEEKADMIIYVIDSGQAIHMQNVFSAGRMIGWY- 429
Query: 368 ADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERG 421
D + H GFG+VLGED K+ +TR + VRL+DLLDE RS L ++G
Sbjct: 430 --DPKVTRIEHAGFGVVLGEDKKKFKTRSGDTVRLIDLLDEGLKRSMEKLKDKG 481
>sp|B0JLI8|SYR_MICAN Arginine--tRNA ligase OS=Microcystis aeruginosa (strain NIES-843)
GN=argS PE=3 SV=1
Length = 585
Score = 400 bits (1028), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/403 (50%), Positives = 276/403 (68%), Gaps = 24/403 (5%)
Query: 29 NETDVRPLI-AACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIE 87
N D PLI AA +FGDYQCN ++ L ++K K P+ V ++KNL ++ +
Sbjct: 23 NFADTDPLIVAASNPRFGDYQCNISLSLAKELKQK------PREVAATLLKNLEIDDLCQ 76
Query: 88 SCSVAGPGFVNVVLSKNWMAKNIQKMLVD---GIETWAPKLRVKKAVVDFSSPNIAKEMH 144
+ +AGPGF+N+ L +++ ++ ++ D G+ T P +K +VDFSSPNIAKEMH
Sbjct: 77 TPEIAGPGFINLTLKPSYLETQLKDLITDNRLGVATANPS---QKIIVDFSSPNIAKEMH 133
Query: 145 VGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNS-EDANETAI 203
VGHLRSTIIGD +AR+LEF + +V+R NHVGDWGTQFGMLI YL E +P++ A+ +
Sbjct: 134 VGHLRSTIIGDCIARILEFRHHQVIRLNHVGDWGTQFGMLITYLQEAYPSALTQADALDL 193
Query: 204 GELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRL 263
G+L FY+++K RFD D FKE A+QAVV+LQSG+P+ +AW +C+ SR+EF K+Y L
Sbjct: 194 GDLVSFYKKAKIRFDEDENFKETARQAVVKLQSGDPQSRQAWQLLCQQSRREFQKIYDIL 253
Query: 264 RVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN------IPLIIVKSDG 317
+ L E+GESFYNPY+ VI EL +QGL+ E GA +F++G +PLI+ KSDG
Sbjct: 254 DIKLTERGESFYNPYLEAVIRELDQQGLLTEDNGALCVFLDGFTNKEGEPLPLIVKKSDG 313
Query: 318 GFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKAS 377
G+NYA+TDLAA+ YR+ E+KAE IIYVTD GQ HF VF AK+AG+L + +
Sbjct: 314 GYNYATTDLAAICYRVREDKAERIIYVTDAGQANHFAQVFQVAKKAGFLPDNVAVV---- 369
Query: 378 HVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER 420
HV FGLVLGEDGK+L+TR E V+L +LLD+A S A L +R
Sbjct: 370 HVAFGLVLGEDGKKLKTRSGETVKLQELLDQAIACSLADLEKR 412
>sp|P37880|SYRC_CRIGR Arginine--tRNA ligase, cytoplasmic OS=Cricetulus griseus GN=RARS
PE=2 SV=1
Length = 661
Score = 400 bits (1027), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/418 (49%), Positives = 282/418 (67%), Gaps = 11/418 (2%)
Query: 6 ENTGNVKRELEKVFDLALKATVPNETDVRPLIAACTA--KFGDYQCNNAMGLWSKIKGKG 63
+N N+ L+ VF A+KA P+ D PL+ + KFGDYQCN+AMG+ +K K
Sbjct: 72 KNMININSRLQDVFGCAIKAAYPD-LDNPPLVVTPSQQPKFGDYQCNSAMGISQMLKAKE 130
Query: 64 TEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAP 123
+ P+ + + I K+LP +E I+ +AGPGF+NV L K+++++ + +LV+GI+ P
Sbjct: 131 QKV-NPRGIAENITKHLPNNEYIDRVEIAGPGFINVHLRKDFVSEQLTNLLVNGIQL--P 187
Query: 124 KL-RVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFG 182
L KK +VDFSSPNIAKEMHVGHLRSTIIG+S++R+ EF+ +VLR NHVGDWGTQFG
Sbjct: 188 ALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRLNHVGDWGTQFG 247
Query: 183 MLIEYLFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYH 242
MLI +L ++FP+ + IG+LQ FY+ SK RFD++ FK+RA Q VV LQS +P +
Sbjct: 248 MLIAHLQDQFPDYLTVS-PPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVSLQSKDPDFI 306
Query: 243 EAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIF 302
+AW IC++SR EF+K+Y L + L E+GESFY + ++ E +G V+ G +++F
Sbjct: 307 KAWNLICDVSRAEFNKIYDALDITLIERGESFYQDRMKDIVKEFEDKGYVQVDDGRKIVF 366
Query: 303 IEGVNIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKR 362
+ G +IPL IVKSDGGF Y ++DLAA+ RL EEKA IIYV D GQ +HF +F+AA+
Sbjct: 367 VPGCSIPLTIVKSDGGFTYDTSDLAAIKQRLFEEKANKIIYVVDNGQAVHFQTIFAAAQM 426
Query: 363 AGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER 420
GW D + +HVGFG+VLGED K+ +TR E VRLVDLL E RS L E+
Sbjct: 427 IGWY---DPKVTQVTHVGFGVVLGEDKKKFKTRSGETVRLVDLLGEGLKRSMDKLKEK 481
>sp|A7YW98|SYRC_BOVIN Arginine--tRNA ligase, cytoplasmic OS=Bos taurus GN=RARS PE=2 SV=1
Length = 660
Score = 397 bits (1021), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/414 (49%), Positives = 278/414 (67%), Gaps = 11/414 (2%)
Query: 10 NVKRELEKVFDLALKATVPNETDVRPLIAACTA--KFGDYQCNNAMGLWSKIKGKGTEFK 67
N+ LE+VF A+KA P + PLI + KFGDYQCN+AMG+ +K K +
Sbjct: 75 NINSCLEEVFGCAIKAAYP-VLENPPLIVTPSQQPKFGDYQCNSAMGICQMLKTKEQKV- 132
Query: 68 GPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKL-R 126
P+ + + I+K+LP +E IE +AGPGF+N+ L K ++++ + +LV+G++ P +
Sbjct: 133 NPREIAENIVKHLPDNEYIEKVEIAGPGFINIHLRKGFVSQQLTNLLVNGVKI--PSIGE 190
Query: 127 VKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIE 186
KK +VDFSSPNIAKEMHVGHLRSTIIG+S+ R+ EF+ VLR NHVGDWGTQFGMLI
Sbjct: 191 NKKVIVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYNVLRLNHVGDWGTQFGMLIA 250
Query: 187 YLFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWA 246
+L +KFP+ + IG+LQ FY+ SK RFD++ FK+RA Q VV LQS P +AW
Sbjct: 251 HLQDKFPDYLTVS-PPIGDLQAFYKESKKRFDTEEEFKKRAYQCVVLLQSKNPDIIKAWK 309
Query: 247 QICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGV 306
IC++SR+EF+K+Y+ L + L E+GESFY + ++ E +G V+ G +++F+ G
Sbjct: 310 LICDVSRQEFNKIYEALDISLIERGESFYQDRMHDIVKEFEDRGFVQVDDGRKIVFVPGC 369
Query: 307 NIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWL 366
++PL IVKSDGG+ Y ++DLAA+ RL EEKA+ IIYV D GQ LHF VF AA+ GW
Sbjct: 370 SVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSLHFQTVFGAAQMIGWY 429
Query: 367 SADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER 420
D + SH GFG+VLGED K+ +TR E VRL+DLL+E RS L E+
Sbjct: 430 ---DPAVTRVSHAGFGVVLGEDKKKFKTRSGETVRLIDLLEEGLKRSMDKLKEK 480
>sp|Q9D0I9|SYRC_MOUSE Arginine--tRNA ligase, cytoplasmic OS=Mus musculus GN=Rars PE=2
SV=2
Length = 660
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/418 (48%), Positives = 281/418 (67%), Gaps = 11/418 (2%)
Query: 6 ENTGNVKRELEKVFDLALKATVPNETDVRPLIAACTA--KFGDYQCNNAMGLWSKIKGKG 63
+N N+ L++VF A++A P+ + PLI + KFGDYQCN+AMG+ +K K
Sbjct: 71 KNMININSRLQEVFGCAIRAAYPD-LENPPLIVTPSQQPKFGDYQCNSAMGISQMLKAKE 129
Query: 64 TEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAP 123
+ P+ + + I K+LP ++ I+ +AGPGF+NV L K+++++ + +LV+G++ P
Sbjct: 130 QKV-SPREIAENITKHLPNNKYIDKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQL--P 186
Query: 124 KLRVK-KAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFG 182
L K K +VDFSSPNIAKEMHVGHLRSTIIG+S++R+ EF+ +VLR NHVGDWGTQFG
Sbjct: 187 VLGDKEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYDVLRLNHVGDWGTQFG 246
Query: 183 MLIEYLFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYH 242
MLI +L +KFP+ + IG+LQ FY+ SK RFD+D FK+RA Q VV LQS P
Sbjct: 247 MLIAHLQDKFPDYLTVS-PPIGDLQAFYKESKKRFDADEEFKKRAYQCVVLLQSKNPDIM 305
Query: 243 EAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIF 302
+AW IC++SR+EF K+Y L + L E+GESFY + ++ E +G V+ G +++F
Sbjct: 306 KAWNLICDVSREEFKKIYDALDITLIERGESFYQDRMKDIVKEFEDKGFVQVDDGRKIVF 365
Query: 303 IEGVNIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKR 362
+ G ++PL IVKSDGG+ Y ++DLAA+ RL EEKA IIYV D GQ +HF +F+AA+
Sbjct: 366 VPGCSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDNGQAIHFQTIFAAAQM 425
Query: 363 AGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER 420
GW D +HVGFG+VLGED K+ +TR E VRL+DLL+E RS L E+
Sbjct: 426 IGWY---DPKVTLVTHVGFGVVLGEDKKKFKTRSGETVRLMDLLEEGLKRSMDKLKEK 480
>sp|P54136|SYRC_HUMAN Arginine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=RARS PE=1
SV=2
Length = 660
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/418 (48%), Positives = 280/418 (66%), Gaps = 11/418 (2%)
Query: 6 ENTGNVKRELEKVFDLALKATVPNETDVRPLIAACT--AKFGDYQCNNAMGLWSKIKGKG 63
+N N+ L++VF A+KA P+ + PL+ + AKFGDYQCN+AMG+ +K K
Sbjct: 71 KNMINIISRLQEVFGHAIKAAYPD-LENPPLLVTPSQQAKFGDYQCNSAMGISQMLKTKE 129
Query: 64 TEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAP 123
+ P+ + + I K+LP +E IE +AGPGF+NV L K+++++ + +LV+G++ P
Sbjct: 130 QKV-NPREIAENITKHLPDNECIEKVEIAGPGFINVHLRKDFVSEQLTSLLVNGVQL--P 186
Query: 124 KL-RVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFG 182
L KK +VDFSSPNIAKEMHVGHLRSTIIG+S++R+ EF+ +VLR NHVGDWGTQFG
Sbjct: 187 ALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRLNHVGDWGTQFG 246
Query: 183 MLIEYLFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYH 242
MLI +L +KFP+ + IG+LQ FY+ SK RFD++ FK+RA Q VV LQ P
Sbjct: 247 MLIAHLQDKFPDYLTVS-PPIGDLQVFYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDIT 305
Query: 243 EAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIF 302
+AW IC++SR+E +K+Y L V L E+GESFY + ++ E +G V+ G +++F
Sbjct: 306 KAWKLICDVSRQELNKIYDALDVSLIERGESFYQDRMNDIVKEFEDRGFVQVDDGRKIVF 365
Query: 303 IEGVNIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKR 362
+ G +IPL IVKSDGG+ Y ++DLAA+ RL EEKA+ IIYV D GQ +HF +F+AA+
Sbjct: 366 VPGCSIPLTIVKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQM 425
Query: 363 AGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER 420
GW D + H GFG+VLGED K+ +TR E VRL+DLL E RS L E+
Sbjct: 426 IGWY---DPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSMDKLKEK 480
>sp|Q5RA20|SYRC_PONAB Arginine--tRNA ligase, cytoplasmic OS=Pongo abelii GN=RARS PE=2
SV=1
Length = 660
Score = 391 bits (1004), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/418 (47%), Positives = 280/418 (66%), Gaps = 11/418 (2%)
Query: 6 ENTGNVKRELEKVFDLALKATVPNETDVRPLIAACT--AKFGDYQCNNAMGLWSKIKGKG 63
+N NV L++VF A+KA P+ + PL+ + AKFGDYQCN+AMG+ +K K
Sbjct: 71 KNMINVISRLQEVFGHAIKAAYPD-LENPPLLVTPSQQAKFGDYQCNSAMGISQMLKTKE 129
Query: 64 TEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAP 123
+ P+ + + I K+LP +E IE +AGPGF+N+ L K+++++ + +LV+G++ P
Sbjct: 130 QKV-NPREIAENITKHLPDNECIEKVEIAGPGFINIHLRKDFVSEQLTSLLVNGVQL--P 186
Query: 124 KL-RVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFG 182
L KK +VDFSSPNIAKEMHVGHLRSTIIG+S++R+ EF+ +VLR NH+GDWGTQFG
Sbjct: 187 ALGENKKVIVDFSSPNIAKEMHVGHLRSTIIGESISRLFEFAGYDVLRLNHIGDWGTQFG 246
Query: 183 MLIEYLFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYH 242
MLI +L +KFP+ + IG+LQ FY+ SK RFD++ FK+RA Q VV LQ P
Sbjct: 247 MLIAHLQDKFPDYLTVS-PPIGDLQVFYKESKKRFDTEEEFKKRAYQCVVLLQGKNPDIT 305
Query: 243 EAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIF 302
+AW IC++SR+E +K+Y L V L E+GESFY + ++ E +G V+ G +++F
Sbjct: 306 KAWKLICDVSRQELNKIYDALDVSLIERGESFYQDMMNDIVKEFEDRGFVQVDDGRKIVF 365
Query: 303 IEGVNIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKR 362
+ G +IPL I+KSDGG+ Y ++DLAA+ RL EEKA+ IIYV D GQ +HF +F+AA+
Sbjct: 366 VPGCSIPLTILKSDGGYTYDTSDLAAIKQRLFEEKADMIIYVVDNGQSVHFQTIFAAAQM 425
Query: 363 AGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER 420
GW D + H GFG+VLGED K+ +TR E VRL+DLL E RS L E+
Sbjct: 426 IGWY---DPKVTRVFHAGFGVVLGEDKKKFKTRSGETVRLMDLLGEGLKRSMDKLKEK 480
>sp|P40329|SYRC_RAT Arginine--tRNA ligase, cytoplasmic OS=Rattus norvegicus GN=Rars
PE=1 SV=2
Length = 660
Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/418 (47%), Positives = 281/418 (67%), Gaps = 11/418 (2%)
Query: 6 ENTGNVKRELEKVFDLALKATVPNETDVRPLIAACTA--KFGDYQCNNAMGLWSKIKGKG 63
+N N+ L+++F A+KA P+ + PL+ + KFGDYQCN+AMG+ +K K
Sbjct: 71 KNMININSRLQELFGCAIKAAYPD-LENPPLVVTPSQQPKFGDYQCNSAMGISQMLKAKE 129
Query: 64 TEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAP 123
+ P+ + + I K+LP +E I+ +AGPGF+NV L K+++++ + +LV+G++ P
Sbjct: 130 QKV-SPREIAENITKHLPNNEYIDRVEIAGPGFINVHLRKDFVSEQLTNLLVNGVQL--P 186
Query: 124 KL-RVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFG 182
L +K +VDFSSPNIAKEMHVGHLRSTIIG+S++R+ EF+ VLR NHVGDWGTQFG
Sbjct: 187 VLGENEKVIVDFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYNVLRLNHVGDWGTQFG 246
Query: 183 MLIEYLFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYH 242
MLI +L +KFP+ + IG+LQ FY+ SK RFD++ FK+RA + VV LQS P
Sbjct: 247 MLIAHLQDKFPDYLTVS-PPIGDLQAFYKESKKRFDTEEEFKKRAYECVVLLQSKNPDIM 305
Query: 243 EAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIF 302
+AW IC++SR+EF+K+Y L + L E+GESFY + ++ E +G V+ G +++F
Sbjct: 306 KAWNLICDVSREEFNKIYDALDITLIERGESFYQDRMKDIVKEFEDKGFVQVDDGRKIVF 365
Query: 303 IEGVNIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKR 362
+ G ++PL IVKSDGG+ Y ++DLAA+ RL EEKA IIYV D GQ HF VF+AA+
Sbjct: 366 VPGCSVPLTIVKSDGGYTYDTSDLAAIKQRLFEEKANKIIYVVDNGQATHFQTVFAAAQM 425
Query: 363 AGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER 420
GW D + +HVGFG+VLGED K+ +TR E VRL+DLL+E RS L E+
Sbjct: 426 IGWY---DPKVTRVAHVGFGVVLGEDKKKFKTRSGETVRLMDLLEEGLRRSMDKLKEK 480
>sp|B1XPX8|SYR_SYNP2 Arginine--tRNA ligase OS=Synechococcus sp. (strain ATCC 27264 / PCC
7002 / PR-6) GN=argS PE=3 SV=1
Length = 585
Score = 387 bits (995), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/406 (49%), Positives = 274/406 (67%), Gaps = 18/406 (4%)
Query: 23 LKATVPNETDVRPLIA-ACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLP 81
+KA + D PL+ A KFGDYQ N A+ L +K K P+ + Q+I++ L
Sbjct: 17 IKAFGEDLKDTDPLVVPASNPKFGDYQSNVALSLTKILK------KNPREIAQSIIEALD 70
Query: 82 PSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKLRVKKAVVDFSSPNIAK 141
++ E+ ++AGPGF+N L +++A ++++ P +K +VDFSSPNIAK
Sbjct: 71 IADTCENPTIAGPGFINFSLKPSYLATLLKEVQQSDRLAIEPAENPQKVIVDFSSPNIAK 130
Query: 142 EMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNS-EDANE 200
EMHVGHLRSTIIGDS+AR+LEF +VLR NHVGDWGTQFGMLI YL E +P++ A+
Sbjct: 131 EMHVGHLRSTIIGDSIARILEFRGQDVLRLNHVGDWGTQFGMLITYLKEVYPDALTKADA 190
Query: 201 TAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVY 260
IG+L FY+++K RFD D AFKE ++ VV+LQSG+ + +AW +CE SR+EF K+Y
Sbjct: 191 LDIGDLVAFYKKAKVRFDEDEAFKEASRNQVVKLQSGDEESQKAWQLLCEQSRREFQKIY 250
Query: 261 KRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN------IPLIIVK 314
L + L E+GESFYNPY+ V+ L + GL+EE GA+ +F+EG +PLI+ K
Sbjct: 251 DILDIKLTERGESFYNPYLADVLTALDEVGLLEEDAGAQCVFLEGFKNKDGDRLPLIVQK 310
Query: 315 SDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYP 374
SDGGFNYA+TDLAA+ YR+ E++A+ IIYVTD GQ HF VF A+RAG+L D
Sbjct: 311 SDGGFNYATTDLAAIRYRIKEDQAKRIIYVTDSGQAGHFAQVFQVAERAGFLPDD----V 366
Query: 375 KASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER 420
+ HV FGLV GEDGK+L+TR + ++L DLLDEA NRS+A L +R
Sbjct: 367 EVVHVPFGLVQGEDGKKLKTRAGDTIKLKDLLDEAVNRSRADLEKR 412
>sp|Q5ZM11|SYRC_CHICK Arginine--tRNA ligase, cytoplasmic OS=Gallus gallus GN=RARS PE=2
SV=1
Length = 661
Score = 387 bits (995), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/406 (46%), Positives = 273/406 (67%), Gaps = 8/406 (1%)
Query: 10 NVKRELEKVFDLALKATVPNETDVRPLIAACTA--KFGDYQCNNAMGLWSKIKGKGTEFK 67
N+ L+++F A++A P E + PL+ + KFGDYQCN+AMG+ + +
Sbjct: 75 NINSRLQEIFGAAIQAAYP-ELENPPLVVTPSQQPKFGDYQCNSAMGITQILLKTKEQKV 133
Query: 68 GPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKLRV 127
P+ + + I K++P +E IE +AGPGF+NV L K++++K + +LV+G++ A R
Sbjct: 134 SPREIAEKITKHIPANECIEKVEIAGPGFINVHLRKDFVSKQLSSLLVNGVQPPAIGKR- 192
Query: 128 KKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEY 187
KK ++DFSSPNIAKEMHVGHLRSTIIG+S+ R+ EF+ +VLR NH+GDWGTQFGMLI +
Sbjct: 193 KKVILDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNHLGDWGTQFGMLIAH 252
Query: 188 LFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQ 247
L ++FP+ + IG+LQ FY+ SK RFD++ FK+RA Q VV LQS +P + +AW
Sbjct: 253 LQDRFPDYLTVS-PPIGDLQAFYKESKRRFDTEEEFKKRAYQCVVLLQSKDPDFIKAWEL 311
Query: 248 ICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN 307
IC++SRKEF K+Y L V L E+GESFY + ++ E +G V+ G +++F+ G +
Sbjct: 312 ICDVSRKEFQKIYNCLDVTLTERGESFYQDMMKDIVKEFEDKGFVQVDDGRKIVFVPGFS 371
Query: 308 IPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLS 367
+PL I+KSDGG+ Y ++DLAAL +RL EEK + +IYV D GQ +H VF+A + GW
Sbjct: 372 VPLTIMKSDGGYTYDTSDLAALRHRLLEEKGDILIYVVDSGQSVHLQTVFAAGQMIGWY- 430
Query: 368 ADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRS 413
D + +H FG+VLGED K+ +TR + VRL+DLL+E R+
Sbjct: 431 --DPKVTRITHAAFGVVLGEDKKKFKTRSGDTVRLMDLLEEGLKRA 474
>sp|B8HSK8|SYR_CYAP4 Arginine--tRNA ligase OS=Cyanothece sp. (strain PCC 7425 / ATCC
29141) GN=argS PE=3 SV=1
Length = 585
Score = 387 bits (993), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/395 (51%), Positives = 259/395 (65%), Gaps = 23/395 (5%)
Query: 36 LIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIESCSVAGPG 95
L+ A KFGDYQ N + L ++ + P+ + I+ +L E E ++AGPG
Sbjct: 31 LVNASHPKFGDYQSNAPLPLAKQLN------QPPRTIASTIVDHLEVGEAWEPPTIAGPG 84
Query: 96 FVNVVLSKNWMAKNIQKMLVD---GIETWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTI 152
F+N L +++A ++ L D GI LRV VVDFSSPNIAKEMHVGHLRSTI
Sbjct: 85 FINFTLKTSYLASQLELRLTDPRLGISAVKLPLRV---VVDFSSPNIAKEMHVGHLRSTI 141
Query: 153 IGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSEDANETA-IGELQEFYR 211
IGD LAR+LEF EVLR NHVGDWGTQFGMLI YL E P + A + +G+L FYR
Sbjct: 142 IGDCLARILEFLGHEVLRLNHVGDWGTQFGMLITYLREVCPEALTAPDAVDLGDLVAFYR 201
Query: 212 RSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLEEKG 271
++K RFDSDP F+ A+Q VVRLQSGEP AW +C SR+EF+K+Y L + L E+G
Sbjct: 202 QAKQRFDSDPDFQAIARQEVVRLQSGEPDSLHAWQLLCAQSRREFEKIYNLLDIKLTERG 261
Query: 272 ESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN------IPLIIVKSDGGFNYASTD 325
ESFYNP +P VI L + GL+ E QGA+ +F+EG PLI+ KSDGG+ YA+TD
Sbjct: 262 ESFYNPLLPQVIQALDQTGLLVEDQGAKCVFLEGYTNKAGDPQPLIVQKSDGGYIYATTD 321
Query: 326 LAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVL 385
LAAL YR+ +++A+WIIYVTD GQ HF VF A+RAGW+ + HV FGLV
Sbjct: 322 LAALRYRIEQDQADWIIYVTDAGQSTHFAQVFQVAQRAGWI----PNRIRLVHVPFGLVQ 377
Query: 386 GEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER 420
GEDGK+L+TR + VRL DLLDEA +R++ L+ R
Sbjct: 378 GEDGKKLKTRSGDTVRLQDLLDEAIDRARNDLVSR 412
>sp|B2J6I0|SYR_NOSP7 Arginine--tRNA ligase OS=Nostoc punctiforme (strain ATCC 29133 /
PCC 73102) GN=argS PE=3 SV=1
Length = 584
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 199/398 (50%), Positives = 265/398 (66%), Gaps = 29/398 (7%)
Query: 36 LIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIESCSVAGPG 95
L++A KFGDYQ N A+ L K+ K P+ + AI++ L SE+ E +AGPG
Sbjct: 31 LVSASNPKFGDYQANVALSLSKKLG------KQPRAIAGAIVEKLDVSEICEPPEIAGPG 84
Query: 96 FVNVVLSKNWMAKNIQKMLVDGIETWAPKLRV------KKAVVDFSSPNIAKEMHVGHLR 149
F+N+ L ++ + + D P+L V K+ VDFSSPNIAKEMHVGHLR
Sbjct: 85 FINLKLKTAYLEAQLNDIQAD------PRLGVPAAKTPKRENVDFSSPNIAKEMHVGHLR 138
Query: 150 STIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNS-EDANETAIGELQE 208
STIIGDS+AR+LEF +VLR NHVGDWGTQFGMLI YL E +P++ AN IG+L
Sbjct: 139 STIIGDSIARILEFQGHDVLRLNHVGDWGTQFGMLIAYLREVYPDALTTANALDIGDLVS 198
Query: 209 FYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLE 268
FYR++K RFD+D AF+E A+Q VVRLQ+G AW +CE SR+EF +Y+ L + L
Sbjct: 199 FYRKAKQRFDTDTAFQETARQEVVRLQAGAEDTLHAWKLLCEQSRREFQVIYELLDIKLT 258
Query: 269 EKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN------IPLIIVKSDGGFNYA 322
E+GESFYNP + G++++L K GL+ E+QGA+ +F+EG +PLI+ KSDGG+NYA
Sbjct: 259 ERGESFYNPLLSGIVEDLEKSGLLVENQGAKCVFLEGFTNREGEPLPLIVQKSDGGYNYA 318
Query: 323 STDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFG 382
+TDLA+L YR+ +++A+ IIYVTD GQ HF F A++AGW+ D + HV FG
Sbjct: 319 TTDLASLRYRIQQDQAKRIIYVTDAGQGNHFAQFFQVARKAGWIPDD----VELVHVPFG 374
Query: 383 LVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER 420
LVLGEDGK+ +TR + VRL DLLDEA + + A L R
Sbjct: 375 LVLGEDGKKFKTRSGDTVRLRDLLDEAVSHAHADLKTR 412
>sp|Q10XL4|SYR_TRIEI Arginine--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101)
GN=argS PE=3 SV=1
Length = 585
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/416 (48%), Positives = 274/416 (65%), Gaps = 19/416 (4%)
Query: 14 ELEKVFDLALKATVPNE-TDVRPLIAACT-AKFGDYQCNNAMGLWSKIKGKGTEFKGPQP 71
+L+ FD AL + P+I + T KFGDYQCN AM L K+K K P+
Sbjct: 7 QLKSRFDKALITAFGQDLVGTDPMIVSTTNPKFGDYQCNVAMSLAKKLKDK------PKA 60
Query: 72 VGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKLRVKKAV 131
+ I+ NL ++ +AGPGF+N+ L ++ ++ ++ D +P ++ V
Sbjct: 61 IATQIINNLNINDYFYPPEIAGPGFINLSLKPEYIENCLETIIKDEKLNISPTKNPQRVV 120
Query: 132 VDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEK 191
+DFSSPNIAKEMHVGHLRSTIIGDSLAR+LEF VLR NHVGDWGTQFGMLI YL E
Sbjct: 121 IDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFQGHNVLRLNHVGDWGTQFGMLISYLREA 180
Query: 192 FPNS-EDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICE 250
FP + + A+ IG+L FY++SK RFD D F+E+++Q VV LQ+G AW +C
Sbjct: 181 FPEALKTADILDIGDLVAFYKQSKKRFDEDQDFQEKSRQEVVNLQTGAEDSRHAWELLCN 240
Query: 251 ISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFI------E 304
SR+EF +Y L + L E+GESFYN +PG+++EL++ GL+EES GA+ +F+ E
Sbjct: 241 QSRREFQVIYDLLDIKLNERGESFYNSMLPGIVEELNRLGLLEESDGAQCVFLSGFTNKE 300
Query: 305 GVNIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAG 364
G ++PLI+ KSDGG+NYA+TDLAAL +R+ +E A +IYVTD GQ HF V+ AK+AG
Sbjct: 301 GEDVPLIVKKSDGGYNYATTDLAALVHRIEKEGATRLIYVTDAGQANHFSQVWQVAKKAG 360
Query: 365 WLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER 420
W+ + + +V FGLVLGEDGK+L+TR E VRL+DLLDEA N+++ L +R
Sbjct: 361 WIPEN----VEIVNVFFGLVLGEDGKKLKTRSGETVRLIDLLDEAINKARNDLEKR 412
>sp|Q9VXN4|SYRC_DROME Probable arginine--tRNA ligase, cytoplasmic OS=Drosophila
melanogaster GN=Aats-arg PE=2 SV=1
Length = 665
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/420 (47%), Positives = 275/420 (65%), Gaps = 14/420 (3%)
Query: 8 TGNVKRELEKVFDLALKATVPNETDVRPLIA---ACTAKFGDYQCNNAMGLWSKIKGKGT 64
+ ++ LE VF A+ + P D +IA + +AKFGDYQCNNAMGL K+K KG
Sbjct: 76 SSSITEHLESVFRQAIASAFPEFRDTPVIIAPVNSTSAKFGDYQCNNAMGLSKKLKEKGI 135
Query: 65 EFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPK 124
K P+ + + + P S +IE +AG GFVNV LSK++ + + +L +G++ P+
Sbjct: 136 N-KAPRDIATELKGHCPASPIIEKLEIAGAGFVNVFLSKDYASLALSNLLRNGVK--PPE 192
Query: 125 LRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGML 184
+ K+ +VDFSSPNIAK+MHVGHLRSTIIG+SL R+LEF +V+R NH+GDWGTQFGML
Sbjct: 193 VIKKRVLVDFSSPNIAKQMHVGHLRSTIIGESLCRLLEFLQHDVIRINHLGDWGTQFGML 252
Query: 185 IEYLFEKFPNSEDANET-AIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHE 243
I +L ++FPN NE+ I +LQ FY+ SK RFD D FK+RA VV LQ G P +
Sbjct: 253 IAHLEDRFPNY--LNESPPISDLQLFYKESKKRFDEDEEFKKRAYSRVVSLQKGVPNSIK 310
Query: 244 AWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFI 303
AW IC +SRKEF +Y+RL + ++E+GESFY + V++ L +GL+E +G +++
Sbjct: 311 AWELICNVSRKEFQTIYERLDISVKERGESFYQSRMLSVVEYLRGKGLLEVDEGREIMWP 370
Query: 304 EGVN--IPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAK 361
+ IPL IVKSDGGF Y ++D+AA+ +RL EE +WIIYV D GQ HF+ +F AA+
Sbjct: 371 DDTKTGIPLTIVKSDGGFTYDTSDMAAIRHRLEEELCDWIIYVVDSGQSTHFNTIFKAAE 430
Query: 362 RAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIERG 421
R+ L + + HV FG+VLGEDGK+ +TR + V+L DLLDE RS L RG
Sbjct: 431 RSAIL---NPLSHRVDHVQFGVVLGEDGKKFKTRSGDTVKLSDLLDEGMKRSLQQLESRG 487
>sp|Q3M769|SYR_ANAVT Arginine--tRNA ligase OS=Anabaena variabilis (strain ATCC 29413 /
PCC 7937) GN=argS PE=3 SV=1
Length = 588
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/392 (50%), Positives = 259/392 (66%), Gaps = 17/392 (4%)
Query: 36 LIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIESCSVAGPG 95
L+ A KFGDYQ N A+ L K+ + P+ + AI++ L SE+ E+ +AGPG
Sbjct: 31 LVTASNPKFGDYQANVALSLSKKLG------QPPRAIASAIVEKLDVSEICETPEIAGPG 84
Query: 96 FVNVVLSKNWMAKNIQKMLVDGIETWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGD 155
F+N+ L ++ + + D ++ +VDFSSPNIAKEMHVGHLRSTIIGD
Sbjct: 85 FINLKLKTAYLEAQLNAIQADSRLGVPTAKHPQREIVDFSSPNIAKEMHVGHLRSTIIGD 144
Query: 156 SLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNS-EDANETAIGELQEFYRRSK 214
S+AR+LEF +VLR NHVGDWGTQFGMLI YL E P + AN IG+L FYR++K
Sbjct: 145 SIARILEFRGHDVLRLNHVGDWGTQFGMLITYLREVSPEALTTANALDIGDLVSFYRQAK 204
Query: 215 NRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESF 274
RFD+D AF+E A+Q VVRLQ+G AW +CE SR+EF +Y L V L E+GESF
Sbjct: 205 QRFDADEAFQETARQEVVRLQAGATDTLHAWKLLCEQSRQEFQVIYDLLDVKLTERGESF 264
Query: 275 YNPYIPGVIDELSKQGLVEESQGARVIFIEGVN------IPLIIVKSDGGFNYASTDLAA 328
YNP +P V++ L GL+ E+QGA+ +F++G +PLI+ KSDGG+NYA+TDLAA
Sbjct: 265 YNPLLPTVVEGLEASGLLVENQGAKCVFLDGFTNREGEPLPLIVQKSDGGYNYATTDLAA 324
Query: 329 LWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGED 388
L YR+ +++A+ I+YVTD GQ HF F A++AGW+ D + HV FGLVLGED
Sbjct: 325 LRYRIQKDEAKRIVYVTDAGQANHFAQFFQVARKAGWIPND----VELVHVPFGLVLGED 380
Query: 389 GKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER 420
GK+ +TR + VRL DLLDEA +R+ A L ER
Sbjct: 381 GKKFKTRSGDTVRLRDLLDEAVSRAHADLEER 412
>sp|Q8YQU9|SYR_NOSS1 Arginine--tRNA ligase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=argS PE=3 SV=1
Length = 588
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/387 (50%), Positives = 257/387 (66%), Gaps = 17/387 (4%)
Query: 36 LIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIESCSVAGPG 95
L++A KFGDYQ N A+ L K+ + P+ + AI++ L SE+ E +AGPG
Sbjct: 31 LVSASNPKFGDYQANVALSLSKKLGQQ------PRAIASAIVEKLDVSEICEKPEIAGPG 84
Query: 96 FVNVVLSKNWMAKNIQKMLVDGIETWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGD 155
F+N+ L ++ + + D ++ +VDFSSPNIAKEMHVGHLRSTIIGD
Sbjct: 85 FINLKLKTAYLEAQLNTIQADTRLGVPTAKHPQREIVDFSSPNIAKEMHVGHLRSTIIGD 144
Query: 156 SLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNS-EDANETAIGELQEFYRRSK 214
S+AR+LEF +VLR NHVGDWGTQFGMLI YL E P + AN IG+L FYR++K
Sbjct: 145 SIARILEFRGHDVLRLNHVGDWGTQFGMLITYLREVSPEALTTANALDIGDLVSFYRQAK 204
Query: 215 NRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESF 274
RFD+D AF+E A+Q VVRLQ+G AW +CE SR+EF +Y L V L E+GESF
Sbjct: 205 QRFDADEAFQETARQEVVRLQAGAADTLHAWKLLCEQSRQEFQVIYDLLDVKLTERGESF 264
Query: 275 YNPYIPGVIDELSKQGLVEESQGARVIFIEGVN------IPLIIVKSDGGFNYASTDLAA 328
YNP +P V++ L K GL+ E+QGA+ +F++G +PLI+ KSDGG+NYA+TDLAA
Sbjct: 265 YNPLLPTVVENLEKSGLLVENQGAKCVFLDGFTNREGEPLPLIVQKSDGGYNYATTDLAA 324
Query: 329 LWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGED 388
L YR+ +++A+ IIY+TD GQ HF F A++AGW+ D + HV FGLVLGED
Sbjct: 325 LRYRIQKDEAKRIIYITDAGQANHFAQFFQVARKAGWIPDD----VELVHVPFGLVLGED 380
Query: 389 GKRLRTRFSEVVRLVDLLDEAKNRSKA 415
GK+ +TR + VRL DLLDEA +R+ A
Sbjct: 381 GKKFKTRSGDTVRLRDLLDEAISRAHA 407
>sp|B1X0N5|SYR_CYAA5 Arginine--tRNA ligase OS=Cyanothece sp. (strain ATCC 51142) GN=argS
PE=3 SV=1
Length = 585
Score = 380 bits (975), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/423 (48%), Positives = 278/423 (65%), Gaps = 25/423 (5%)
Query: 10 NVKRELEKVFDLALKATVPNE-TDVRPLI-AACTAKFGDYQCNNAMGLWSKIKGKGTEFK 67
++ +L + F AL + E DV P + A + GDYQ N A+ L K+ K
Sbjct: 3 SINEQLTQKFQDALVKSFGEEFKDVDPQVNLARDLRHGDYQANIALPLAKKLG------K 56
Query: 68 GPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVD---GIETWAPK 124
P+ + Q I+ NL + + E+ ++ GPGF+N+ L +++ ++ + + GIE
Sbjct: 57 NPREIAQIIINNLSLNTICENPTIGGPGFINLKLKSSYLETQLKSLYQNQRLGIEKVH-- 114
Query: 125 LRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGML 184
K +VDFSSPNIAKEMHVGHLRSTIIGD +AR LEF EVLR NHVGDWGTQFGML
Sbjct: 115 -NADKVIVDFSSPNIAKEMHVGHLRSTIIGDCIARTLEFLGYEVLRLNHVGDWGTQFGML 173
Query: 185 IEYLFEKFPNS-EDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHE 243
I YL E +P++ A+ IG+L FY+++K RFD DP F+E A++AVV+LQSG+ + +
Sbjct: 174 ITYLKEVYPDALTQADVLEIGDLVNFYKQAKKRFDEDPKFQEAAREAVVKLQSGDEESRK 233
Query: 244 AWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFI 303
AW +C+ SR+EF K+Y RL V L E+GESFYNPY+ VI L +QG++E+ QGA+ +F+
Sbjct: 234 AWQLLCDQSRREFQKIYDRLDVKLIERGESFYNPYLNDVIKALDEQGILEKDQGAQCVFL 293
Query: 304 EGVN------IPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVF 357
EG +PLI+ KSDGG+NYA+TDLAAL YR+ E+KA+ IIYVTD GQ HF VF
Sbjct: 294 EGFTNKSGDPLPLIVQKSDGGYNYATTDLAALKYRIQEDKAKRIIYVTDAGQSNHFAQVF 353
Query: 358 SAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVL 417
AK+A +L D+ +HV FGLV GEDGK+L+TR E V+L DLLDEA N ++ L
Sbjct: 354 QVAKKANFLP--DTV--DVTHVPFGLVKGEDGKKLKTRSGETVKLKDLLDEAVNYARKDL 409
Query: 418 IER 420
R
Sbjct: 410 ENR 412
>sp|Q6MEP4|SYR_PARUW Arginine--tRNA ligase OS=Protochlamydia amoebophila (strain UWE25)
GN=argS PE=3 SV=1
Length = 584
Score = 369 bits (947), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/422 (45%), Positives = 271/422 (64%), Gaps = 28/422 (6%)
Query: 15 LEKVFDLALKATVPN----ETDVRPLIAACTA-KFGDYQCNNAMGLWSKIKGKGTEFKGP 69
L +F A P+ + + +P I T KFG YQ N+AM L +K K P
Sbjct: 8 LANLFQQATANAFPDLSVLDPNFQPEITPSTQEKFGHYQFNSAMKLAKLLK------KNP 61
Query: 70 QPVGQAIMK----NLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKL 125
+ V +AI+ +LPP IE +AGPGF+N+ S ++++KN+ +L D
Sbjct: 62 RQVAEAIVNQLTDSLPPLSKIE---IAGPGFINMTFSTDFLSKNLDILLRDAHFGIPFPE 118
Query: 126 RVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLI 185
+ +K ++DFSSPN+AKEMHVGHLRST+IGDSLAR+ EF V+R NH+GDWGT FGMLI
Sbjct: 119 KPEKIIIDFSSPNVAKEMHVGHLRSTVIGDSLARLFEFLGHHVIRLNHLGDWGTAFGMLI 178
Query: 186 EYLFEKFPNSEDANE-TAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEA 244
Y+ E+ PN + T + L +YR SK +FD +P FK RAQ VV LQ GE K EA
Sbjct: 179 AYMKEEAPNVLSGEQKTDLTHLVSWYRSSKKKFDEEPEFKRRAQLEVVALQQGEQKAREA 238
Query: 245 WAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIE 304
W ICEIS+K + ++Y+ L V + ++GESFYNP++P ++ +L K+GLV+ S GA+ IF+E
Sbjct: 239 WQMICEISQKAYQEIYQLLDVKIIDRGESFYNPFLPNIVSDLEKKGLVKISDGAKCIFLE 298
Query: 305 GV------NIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFS 358
G N+PL+I KSDGG+NY +TD+AA+++R+ EK + +IY+TD GQ HF M+F
Sbjct: 299 GFQNREGENLPLMIQKSDGGYNYDTTDMAAIYHRIYHEKGDRLIYITDAGQATHFQMIFK 358
Query: 359 AAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLI 418
AA++A +L D+T + HV FGLVLG DGK+ RTR E +L+DLL A N + +L
Sbjct: 359 AAEKAKYL---DTTQIRVDHVPFGLVLGTDGKKFRTRSGETEKLIDLLRTAINCADKILS 415
Query: 419 ER 420
E+
Sbjct: 416 EK 417
>sp|Q55486|SYR_SYNY3 Arginine--tRNA ligase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=argS PE=3 SV=1
Length = 584
Score = 368 bits (944), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/423 (46%), Positives = 277/423 (65%), Gaps = 25/423 (5%)
Query: 10 NVKRELEKVFDLALKATVPNETDV-RPLIA-ACTAKFGDYQCNNAMGLWSKIKGKGTEFK 67
++ +L F AL+ P++ + PL+ A KFGD+QCN A+ L ++ +
Sbjct: 3 SILTQLNDHFAQALEGQFPSDVTLPTPLVVPASNPKFGDFQCNIALPLAKQLG------Q 56
Query: 68 GPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVD---GIETWAPK 124
P+ + I+ + SE+ E ++AGPGF+N+ L +++ + + K+ + G+ +
Sbjct: 57 PPRAIAMEIVDKVNLSEICEPLTIAGPGFINIKLLPDYLGEQLIKLQQNQQLGVSLVKGE 116
Query: 125 LRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGML 184
R+ VVDFSSPNIAKEMHVGHLRSTIIGD LAR+LEF +VLR NHVGDWGTQFGML
Sbjct: 117 ERI---VVDFSSPNIAKEMHVGHLRSTIIGDCLARVLEFRGYDVLRLNHVGDWGTQFGML 173
Query: 185 IEYLFEKFPNS-EDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHE 243
I YL E +P + A+ IG+L FY+++K RFD D F+E ++QAVV LQ+G+ K +
Sbjct: 174 ITYLKEVYPEALVTADALDIGDLVTFYKQAKQRFDQDEQFRETSRQAVVALQAGDAKSIK 233
Query: 244 AWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFI 303
AW +CE SR+EF +Y L + +EE+GESFYNP++PGV++ L ++ L+ E GA+ +F+
Sbjct: 234 AWQLLCEQSRREFQLIYDCLDITIEERGESFYNPFLPGVVELLQEKDLLVEDNGAQCVFL 293
Query: 304 EGVN------IPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVF 357
+G +PLI+ KSDGG+NYA+TDLAAL YRLN + AE IIYVTD GQ HF F
Sbjct: 294 DGFTNKDGDRLPLIVQKSDGGYNYATTDLAALNYRLNTDGAEKIIYVTDAGQANHFAQFF 353
Query: 358 SAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVL 417
A++AG L+ D T + HV FGLV GEDGK+L+TR + +RL DLL EA R++ L
Sbjct: 354 QVAEKAGILT--DPT--QVVHVPFGLVKGEDGKKLKTRAGDTIRLKDLLTEAVTRARQDL 409
Query: 418 IER 420
R
Sbjct: 410 ETR 412
>sp|B7KCT7|SYR_CYAP7 Arginine--tRNA ligase OS=Cyanothece sp. (strain PCC 7424) GN=argS
PE=3 SV=1
Length = 585
Score = 366 bits (940), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/408 (47%), Positives = 267/408 (65%), Gaps = 25/408 (6%)
Query: 14 ELEKVFDLALKATVPNE-TDVRPLIAACT-AKFGDYQCNNAMGLWSKIKGKGTEFKGPQP 71
+L+ F ALK + +D+ L+ T KFGDYQ N A+ L +K + P+
Sbjct: 7 QLKTRFIQALKTAFDQDFSDLEGLVVPATNPKFGDYQSNVALSLAKPLK------QPPRT 60
Query: 72 VGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVD---GIETWAPKLRVK 128
+ + I+K L S++ E +AG GF+N+ L N++ + K+ D G+E +P RV
Sbjct: 61 IAEQIIKALDISDLCEPPQIAGAGFINLTLKANFLENLLAKIQKDSRLGVEKASPSARV- 119
Query: 129 KAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYL 188
+VDFSSPNIAKEMHVGHLRSTI+GD +AR+LEF +VLR NHVGDWGTQFGMLI YL
Sbjct: 120 --IVDFSSPNIAKEMHVGHLRSTILGDCIARVLEFRGHDVLRLNHVGDWGTQFGMLIAYL 177
Query: 189 FEKFPNS-EDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQ 247
E +P + A+ +G+L FY+++K RFD D FKE A++ VV+LQ+G AW
Sbjct: 178 REVYPEALTTADALNLGDLVAFYKKAKVRFDEDETFKETARKEVVKLQAGAKDTRHAWQL 237
Query: 248 ICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN 307
+C+ SR+EF +Y L V+L E+GESFYNP +P ++ +L ++GL+ E QGA+ +F+EG
Sbjct: 238 LCDQSRREFQVIYNILDVNLTERGESFYNPLLPEIVGQLDEEGLLTEDQGAKCVFLEGFT 297
Query: 308 ------IPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAK 361
+PLI+ KSD G+NYA+TDLAAL YR+ E+KAE IIYVTD GQ HF VF AK
Sbjct: 298 NKEGNPLPLIVQKSDEGYNYATTDLAALKYRIKEDKAERIIYVTDAGQANHFAQVFQVAK 357
Query: 362 RAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEA 409
+AG + + + HV FG+V GEDGK+L+TR + ++L DL+DEA
Sbjct: 358 KAGIIPEN----IEVVHVAFGVVKGEDGKKLKTRSGDTIKLKDLIDEA 401
>sp|Q7VE03|SYR_PROMA Arginine--tRNA ligase OS=Prochlorococcus marinus (strain SARG /
CCMP1375 / SS120) GN=argS PE=3 SV=1
Length = 603
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/427 (46%), Positives = 271/427 (63%), Gaps = 34/427 (7%)
Query: 11 VKRELEKVFDLALKATVPNETDVRP-LIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGP 69
V+R L F A + + P L+AA +FGD+Q N A+ L IK K P
Sbjct: 12 VQRALNTAFPEAASQVKESGDFLNPQLVAATKPEFGDFQINGALALARIIK------KSP 65
Query: 70 QPVGQAIMKNLPPSEMIESCS----VAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKL 125
+ + + ++K L +E+ ++ +AGPGF+N+ L + I L D + P +
Sbjct: 66 RQIAEILIKQLESNEVFKAICLPPEIAGPGFINLTLQNTCLINEITSRLNDDL-LGVPLV 124
Query: 126 -------RVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWG 178
++K +VDFSSPNIAKEMHVGHLRSTIIGDS+AR+L + +V+R NHVGDWG
Sbjct: 125 NDDEITKKLKPVIVDFSSPNIAKEMHVGHLRSTIIGDSIARILNYRGYKVIRLNHVGDWG 184
Query: 179 TQFGMLIEYLFEKFPNS-EDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSG 237
TQFGMLI +L E P + AN +G L EFY+++K RFD D F++ ++ VV LQ G
Sbjct: 185 TQFGMLITHLKEVAPKALTTANVINLGNLVEFYKKAKQRFDEDEYFQQCSRNEVVNLQRG 244
Query: 238 EPKYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQG 297
+ +AW +CE SRKEF+K+Y RL++++ E+GESFYNP++ GVID+L++ GL+ E G
Sbjct: 245 NKESLKAWELLCEQSRKEFNKIYDRLKIEISERGESFYNPFLQGVIDDLTRSGLLVEDDG 304
Query: 298 ARVIFIEGVN------IPLIIVKSDGGFNYASTDLAALWYRLNEEK----AEWIIYVTDV 347
A+ +F+ G+N +PLII K+DGGFNYA+TDLAA+ YRL ++ A IIYVTD
Sbjct: 305 AKCVFLNGINGKDGNPLPLIIQKADGGFNYATTDLAAIRYRLKDQPDGDGAGRIIYVTDS 364
Query: 348 GQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLD 407
GQ HF VF AKRA WL + + HV FGLV GEDGK+L+TR E VRL DLLD
Sbjct: 365 GQANHFAGVFQVAKRAKWLPSSS----RIEHVPFGLVQGEDGKKLKTRSGETVRLKDLLD 420
Query: 408 EAKNRSK 414
EA +R+K
Sbjct: 421 EAISRAK 427
>sp|B7JVP5|SYR_CYAP8 Arginine--tRNA ligase OS=Cyanothece sp. (strain PCC 8801) GN=argS
PE=3 SV=1
Length = 585
Score = 357 bits (916), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 189/412 (45%), Positives = 265/412 (64%), Gaps = 25/412 (6%)
Query: 10 NVKRELEKVFDLAL-KATVPNETDVRPLIA-ACTAKFGDYQCNNAMGLWSKIKGKGTEFK 67
++ +L F AL KA +D+ P++ A KFGDYQ N A+ L K+ +
Sbjct: 3 SINEQLTNYFIQALVKAFGAEFSDIDPIVVPASNPKFGDYQANIALSLAKKLGEQ----- 57
Query: 68 GPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNI---QKMLVDGIETWAPK 124
P+ + Q I+ NL ++ E ++AGPGF+N+ + ++A + Q G+ P
Sbjct: 58 -PRAIAQKIIDNLSLEDLGELPTIAGPGFINIKIKPTYLATQLKVQQNSSSLGVTKADP- 115
Query: 125 LRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGML 184
++K +VDFSSPNIAKEMHVGHLRSTIIGD +AR+LE +VLR NHVGDWGTQFGML
Sbjct: 116 --IEKIIVDFSSPNIAKEMHVGHLRSTIIGDCIARILEVRGHQVLRLNHVGDWGTQFGML 173
Query: 185 IEYLFEKFPNS-EDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHE 243
I YL E +P++ A+ IG+L FY+++K RFD D F+E A+ VV+LQ+G+ +
Sbjct: 174 IAYLAEVYPDALTTADALDIGDLVTFYKQAKKRFDEDEKFQETARNQVVKLQAGDSQTRH 233
Query: 244 AWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFI 303
AW +CE SR+EF +Y L +++ E+GESFYNP + +I EL QGL+++ GA+ +F+
Sbjct: 234 AWQLLCEQSRREFQVIYDILDINITERGESFYNPLLEDIIKELDHQGLLKKDAGAQCVFL 293
Query: 304 EGVN------IPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVF 357
+G +PLI+ KSDGG+NYA+TDLAAL YR+ +++AE IIYVTD GQ HF VF
Sbjct: 294 DGFTNKSGDPLPLIVQKSDGGYNYATTDLAALKYRITQDQAERIIYVTDAGQANHFAQVF 353
Query: 358 SAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEA 409
AK+A + + + HV FGLV GEDGK+L+TR ++L DLLDEA
Sbjct: 354 QVAKKAHIIPKN----VEIIHVPFGLVKGEDGKKLKTRSGTTIKLRDLLDEA 401
>sp|A5GW85|SYR_SYNR3 Arginine--tRNA ligase OS=Synechococcus sp. (strain RCC307) GN=argS
PE=3 SV=1
Length = 590
Score = 354 bits (909), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 194/427 (45%), Positives = 266/427 (62%), Gaps = 38/427 (8%)
Query: 11 VKRELEKVFDLALKATVPN-ETDVRPLIA-ACTAKFGDYQCNNAMGLWSKIKGKGTEFKG 68
+ + LE A++ P + ++ P + A +FGD+Q N A+ L +K +
Sbjct: 4 IAQTLEAQLRAAMQQAFPEADGELNPALGPASKPEFGDFQANGALALAKPLK------QA 57
Query: 69 PQPVGQAIMKNLPP----SEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPK 124
P+ + AI++ L S + E+ +AGPGF+N+ L + +A +++ + D P+
Sbjct: 58 PRQIAAAIVEQLQNNPEFSALAEAPQIAGPGFINITLKPSVLAAEVRQRIGD------PR 111
Query: 125 LRVKKA-------VVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDW 177
L V +VDFSSPNIAKEMHVGHLRSTIIGD LAR+LEF +VLR NHVGDW
Sbjct: 112 LGVAAVEQAEAPVIVDFSSPNIAKEMHVGHLRSTIIGDCLARVLEFRGHQVLRLNHVGDW 171
Query: 178 GTQFGMLIEYLFEKFPNS-EDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQS 236
GTQFGMLI +L + P + A+ +G+L FYR +K RFD D AF+ +++ VV+LQ
Sbjct: 172 GTQFGMLITHLKQVAPEALNTADAIDLGDLVAFYREAKKRFDDDEAFQTTSREEVVKLQG 231
Query: 237 GEPKYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQ 296
G+ +AW +C+ SR+EF K+Y RL + L E+GESFYNP + V+D+L GL+ +
Sbjct: 232 GDATSLKAWGLLCDQSRREFQKIYDRLDIRLNERGESFYNPQLAAVVDDLRSSGLLVTDE 291
Query: 297 GARVIFIEGV------NIPLIIVKSDGGFNYASTDLAALWYRLNE--EKAEWIIYVTDVG 348
GA +F+EGV +PLI+ KSDGGFNYA+TDLAA+ YRL + A +IYVTD G
Sbjct: 292 GAGCVFLEGVVGKEGKPLPLIVQKSDGGFNYATTDLAAIRYRLGSAGDGAGRVIYVTDAG 351
Query: 349 QQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDE 408
Q HF VF AKRAGW+ A S HV FGLV G+DGK+L+TR + VRL DLLDE
Sbjct: 352 QAAHFAGVFQVAKRAGWVPAAASL----EHVPFGLVQGDDGKKLKTRAGDTVRLKDLLDE 407
Query: 409 AKNRSKA 415
A R++A
Sbjct: 408 AVERAQA 414
>sp|A5GP97|SYR_SYNPW Arginine--tRNA ligase OS=Synechococcus sp. (strain WH7803) GN=argS
PE=3 SV=1
Length = 597
Score = 351 bits (901), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 190/406 (46%), Positives = 254/406 (62%), Gaps = 37/406 (9%)
Query: 36 LIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPP----SEMIESCSV 91
L A +FGD+Q N A+ L +K + P+ + AI+ L +++ +
Sbjct: 38 LAPASKPEFGDFQANGALALAKPLK------QAPRQIATAIVAQLQADPAFTDLCLEPQI 91
Query: 92 AGPGFVNVVLSKNWMAKNI------QKMLVDGIETWAPKLRVKKAVVDFSSPNIAKEMHV 145
AGPGF+N+ + +A + Q++ V +E AP VVDFSSPNIAKEMHV
Sbjct: 92 AGPGFINLTVRPERLAAEVSARLGDQRLGVPAVEQAAP------VVVDFSSPNIAKEMHV 145
Query: 146 GHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSED-ANETAIG 204
GHLRSTIIGDSLAR+LEF VLR NHVGDWGTQFGMLI +L + P++ D A+ +G
Sbjct: 146 GHLRSTIIGDSLARVLEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPDALDTADAVDLG 205
Query: 205 ELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLR 264
+L FYR +K RFD D AF+ +++ VV+LQ G+P +AW +C+ SR+EF K+Y RL
Sbjct: 206 DLVAFYREAKKRFDDDEAFQTTSREEVVKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLD 265
Query: 265 VDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN------IPLIIVKSDGG 318
+ L E+GESFYNP++P VID L L+ GA+ +F+EGV +P+I+ KSDGG
Sbjct: 266 IRLNERGESFYNPFLPAVIDGLKDAELLVTDDGAQCVFLEGVQGKDGKPLPVIVQKSDGG 325
Query: 319 FNYASTDLAALWYRL----NEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYP 374
FNYA+TDLAA+ YR + + A +IYVTD GQ HF VF A+RAGW+
Sbjct: 326 FNYATTDLAAIRYRFGAAPDGDDARRVIYVTDAGQANHFAGVFQVAQRAGWIPEG----A 381
Query: 375 KASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER 420
+ HV FGLV GEDGK+L+TR + VRL DLLDEA R++ L R
Sbjct: 382 RLEHVPFGLVQGEDGKKLKTRAGDTVRLRDLLDEAVERAETDLRSR 427
>sp|Q7U3V8|SYR_SYNPX Arginine--tRNA ligase OS=Synechococcus sp. (strain WH8102) GN=argS
PE=3 SV=1
Length = 597
Score = 350 bits (897), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 190/406 (46%), Positives = 255/406 (62%), Gaps = 37/406 (9%)
Query: 36 LIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPP-SEMIESC---SV 91
L A +FGD+Q N A+ L +K + P+ + AI++ L S + C +
Sbjct: 38 LAPASKPEFGDFQANGALPLAKPLK------QAPRQIATAIVEQLQADSGFTDLCLEPQI 91
Query: 92 AGPGFVNVVLSKNWMAKNI------QKMLVDGIETWAPKLRVKKAVVDFSSPNIAKEMHV 145
AGPGF+N+ + +A + +++ V +E AP VVDFSSPNIAKEMHV
Sbjct: 92 AGPGFINLTIRPERLAAEVSARLGDERLGVPAVEQAAP------VVVDFSSPNIAKEMHV 145
Query: 146 GHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNS-EDANETAIG 204
GHLRSTIIGDSLAR+LEF VLR NHVGDWGTQFGMLI +L + P++ E A+ +G
Sbjct: 146 GHLRSTIIGDSLARVLEFRGHTVLRLNHVGDWGTQFGMLITHLKQVAPDALETADAVDLG 205
Query: 205 ELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLR 264
+L FYR +K RFD D AF+ +++ VV+LQ G+P +AW +C+ SR+EF K+Y RL
Sbjct: 206 DLVAFYREAKKRFDDDEAFQSTSREEVVKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLD 265
Query: 265 VDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN------IPLIIVKSDGG 318
+ L E+GESFYNP++P VID L L+ GA+ +F+EGV +P+I+ KSDGG
Sbjct: 266 IRLNERGESFYNPFLPAVIDGLKAAELLVTDDGAQCVFLEGVQGKDGKPLPVIVQKSDGG 325
Query: 319 FNYASTDLAALWYRL----NEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYP 374
FNYA+TDLAA+ YR + + A ++YVTD GQ HF VF A+RAGW+
Sbjct: 326 FNYATTDLAAIRYRFGAAPDGDGARRVVYVTDAGQANHFAGVFQVAERAGWI----PDGA 381
Query: 375 KASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER 420
+ HV FGLV GEDGK+L+TR + VRL DLLDEA R++ L R
Sbjct: 382 RLEHVPFGLVQGEDGKKLKTRAGDTVRLRDLLDEAVERAETDLRSR 427
>sp|Q3AGU9|SYR_SYNSC Arginine--tRNA ligase OS=Synechococcus sp. (strain CC9605) GN=argS
PE=3 SV=1
Length = 590
Score = 346 bits (887), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 187/406 (46%), Positives = 252/406 (62%), Gaps = 37/406 (9%)
Query: 36 LIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPP----SEMIESCSV 91
L +A +FGD+Q N A+ L +K + P+ + AI++ L +++ +
Sbjct: 31 LASASKQEFGDFQANGALPLAKPLK------QAPRQIATAIVEQLQADPAFTDLCLEPQI 84
Query: 92 AGPGFVNVVLSKNWMAKNI------QKMLVDGIETWAPKLRVKKAVVDFSSPNIAKEMHV 145
AGPGF+N+ + +A + +++ V + AP VVDFSSPNIAKEMHV
Sbjct: 85 AGPGFINLTIRPERLAAEVSARLGDERLGVPAVSNAAP------VVVDFSSPNIAKEMHV 138
Query: 146 GHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSED-ANETAIG 204
GHLRSTIIGDSLAR+LEF VLR NHVGDWGTQFGMLI +L + P + D A+ +G
Sbjct: 139 GHLRSTIIGDSLARVLEFRGHPVLRLNHVGDWGTQFGMLITHLKQVAPEALDTADAVDLG 198
Query: 205 ELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLR 264
+L FYR +K RFD D AF+ ++ VV+LQ G+P +AW +C+ SR+EF K+Y RL
Sbjct: 199 DLVAFYREAKKRFDDDEAFQSTSRDEVVKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLD 258
Query: 265 VDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN------IPLIIVKSDGG 318
+ L E+GESFYNP++P VID L L+ GA+ +F+EGV +P+I+ KSDGG
Sbjct: 259 ILLSERGESFYNPFLPAVIDGLKAAELLVTDDGAQCVFLEGVQGKDGKPLPVIVQKSDGG 318
Query: 319 FNYASTDLAALWYRLNE----EKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYP 374
FNYA+TDLAA+ YR + A ++YVTD GQ HF VF A+RAGW+
Sbjct: 319 FNYATTDLAAIRYRFGAAPEGDGARRVVYVTDAGQANHFAGVFQVAERAGWI----PDGA 374
Query: 375 KASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER 420
+ HV FGLV GEDGK+L+TR + VRL DLLDEA R++ L R
Sbjct: 375 RLEHVPFGLVQGEDGKKLKTRAGDTVRLRDLLDEAVERAETDLRSR 420
>sp|Q19825|SYRC_CAEEL Probable arginine--tRNA ligase, cytoplasmic OS=Caenorhabditis
elegans GN=rrt-1 PE=2 SV=2
Length = 713
Score = 345 bits (885), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 186/424 (43%), Positives = 266/424 (62%), Gaps = 14/424 (3%)
Query: 3 TEEENTGNVKRELEKVFDLALKATVPNETDVRPLIAACTA--KFGDYQCNNAMGLWSKIK 60
T E+ ++ L+ +F A++ P DV PL+ A T +FGDYQCN+AM + +K+K
Sbjct: 121 TVEDYGSSIFGRLQSLFKKAIEDAFPG-LDV-PLLLAETPNPQFGDYQCNSAMPIAAKLK 178
Query: 61 GKGTEFKGPQPVGQAIMKNLPPS-EMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIE 119
K P V + I LP + +E V GF+N+ L+ +++ + I + +G++
Sbjct: 179 ANKIN-KRPGDVAKEIQAKLPTKIDFVEKIDVMPAGFINIFLNTDYLRRQISLLASEGVK 237
Query: 120 TWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGT 179
PKL K+ +VDFSSPNIAKEMHVGHLRSTIIGDS+ R+ E +VLR NH+GDWGT
Sbjct: 238 L--PKLTRKRVLVDFSSPNIAKEMHVGHLRSTIIGDSICRLFEAVGFDVLRVNHIGDWGT 295
Query: 180 QFGMLIEYLFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEP 239
QFGMLI +L+++FP+ I +LQ FY+ SK RFD D FK+RA + VV+LQS +
Sbjct: 296 QFGMLIAHLYDRFPDFL-KKLPDISDLQAFYKESKKRFDEDEQFKKRAYEYVVKLQSHDG 354
Query: 240 KYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVID--ELSKQGLVEESQG 297
+AW IC++S+K VY L + +++ GESFY + ++ + +K ++ E G
Sbjct: 355 DIVKAWNTICDVSKKYNQIVYNYLDIKIKDVGESFYQDKMIELVKWVKTNKPDMLREEDG 414
Query: 298 ARVIFIEGVNIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVF 357
+++F G +IPL +VKSDGGF Y ++DLAAL YR+ EEK +W IYV D GQ LH + V+
Sbjct: 415 RQIMFPTGCDIPLTVVKSDGGFTYDTSDLAALKYRMLEEKCDWNIYVVDSGQSLHLETVY 474
Query: 358 SAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVL 417
+A + GW D + + HV FGLVLG+D K+ +TR E VRL+DLL E R+ L
Sbjct: 475 AAGRDFGWY---DESIQRVEHVAFGLVLGDDKKKFKTRSGETVRLLDLLSEGVKRATEKL 531
Query: 418 IERG 421
IE+G
Sbjct: 532 IEKG 535
>sp|A9BDF0|SYR_PROM4 Arginine--tRNA ligase OS=Prochlorococcus marinus (strain MIT 9211)
GN=argS PE=3 SV=1
Length = 603
Score = 345 bits (885), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 190/406 (46%), Positives = 255/406 (62%), Gaps = 31/406 (7%)
Query: 36 LIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSE----MIESCSV 91
L+ A +FGD+Q N A+ L +K K P+ + + I+K L ++ + +
Sbjct: 38 LVPATKPEFGDFQVNGALALSKILK------KAPRKIAEEIIKQLVKNDDFNKLCLKPEI 91
Query: 92 AGPGFVNVVLSKNWMAKNIQKMLVD---GIETWAP---KLRVKKAVVDFSSPNIAKEMHV 145
AGPGF+N+ + + + I L D G+ P +K VVDFSSPNIAKEMHV
Sbjct: 92 AGPGFINLTIQNSCLTTEICARLNDDHLGVPIAKPLKTHKSLKPIVVDFSSPNIAKEMHV 151
Query: 146 GHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNS-EDANETAIG 204
GHLRSTIIGDS+AR+LEF VLR NHVGDWGTQFGMLI YL P + AN +G
Sbjct: 152 GHLRSTIIGDSIARVLEFRGHPVLRLNHVGDWGTQFGMLITYLKLVAPEALTTANAINLG 211
Query: 205 ELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLR 264
+L +FYR++K FD D F++ +++ VVRLQ+G+P+ +AW +C+ SR EF+K+YKRL
Sbjct: 212 DLVKFYRQAKKLFDEDETFQDASREEVVRLQNGDPQSLKAWQLLCDQSRIEFEKIYKRLD 271
Query: 265 VDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN------IPLIIVKSDGG 318
+ + E+GESFYN Y+ VID+L L+ GA+ IF++ + +PLI+ K+DGG
Sbjct: 272 IHITERGESFYNQYLQDVIDDLKSTNLLVTDNGAKCIFLDDITGKDGKPLPLIVQKTDGG 331
Query: 319 FNYASTDLAALWYRLNE----EKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYP 374
FNYA+TDLAA+ YRL + A +IYVTD GQ HF VF A+RA W+ D
Sbjct: 332 FNYATTDLAAIRYRLQAYPQGDGACRLIYVTDAGQASHFFAVFQVARRANWIPND----C 387
Query: 375 KASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER 420
+ HV FGLV GEDGK+L+TR + VRL DLLDEA R+K L ER
Sbjct: 388 RIEHVPFGLVQGEDGKKLKTRSGDTVRLKDLLDEAIIRAKNDLEER 433
>sp|A2CDB7|SYR_PROM3 Arginine--tRNA ligase OS=Prochlorococcus marinus (strain MIT 9303)
GN=argS PE=3 SV=1
Length = 603
Score = 344 bits (882), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 192/437 (43%), Positives = 268/437 (61%), Gaps = 40/437 (9%)
Query: 10 NVKRELEKVFDLALKATVPNETDVRPLIA-ACTAKFGDYQCNNAMGLWSKIKGKGTEFKG 68
++ +++ F A + + T + P +A A +FGD+Q N A+ L +K +
Sbjct: 11 QLRAAIDRAFPEAAASARESGTGLDPQLAPASKPEFGDFQANAALPLAKPLK------QP 64
Query: 69 PQPVGQAIMKNLPPSEMIESC--------SVAGPGFVNVVLSKNWMAKNIQKMLVDG--- 117
P+ + AI+ L M+++ +AGPGF+N+ + +A +Q L D
Sbjct: 65 PRQIAAAIVDQL----MVDTAFNAICLTPDIAGPGFINLTVRPECLAAEVQARLADARLG 120
Query: 118 ---IETWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHV 174
+E + VVDFSSPNIAKEMHVGHLRSTIIGDSLAR+LEF VLR NHV
Sbjct: 121 VPLVEGDNDGQQPTPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRLNHV 180
Query: 175 GDWGTQFGMLIEYLFEKFPNS-EDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVR 233
GDWGTQFGMLI +L + P + E A+ +G+L FYR++K RFD D AF+ +++ VV+
Sbjct: 181 GDWGTQFGMLITHLKQVAPEALETADAVDLGDLVVFYRQAKQRFDDDEAFQTTSREEVVK 240
Query: 234 LQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVE 293
LQ G+P +AW+ +C+ SR+EF K+Y RL V L E+GESFYN Y+ V+++L+ GL+
Sbjct: 241 LQGGDPLSLKAWSLLCDQSRREFQKIYDRLDVRLNERGESFYNAYLESVVEDLNVSGLLV 300
Query: 294 ESQGARVIFIEGVN------IPLIIVKSDGGFNYASTDLAALWYRL----NEEKAEWIIY 343
GA+ +F+EGV +P+I+ KSDGGFNYA+TDLAA+ YR + A +IY
Sbjct: 301 SDDGAQCVFLEGVTGKDGKPLPVIVQKSDGGFNYATTDLAAMRYRFAAPPQGDGARRVIY 360
Query: 344 VTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLV 403
VTD GQ HF VF A+RAGW+ + HV FGLV GEDGK+L+TR + VRL
Sbjct: 361 VTDAGQANHFAGVFQVAQRAGWI----PDAGRLQHVPFGLVQGEDGKKLKTRAGDTVRLR 416
Query: 404 DLLDEAKNRSKAVLIER 420
+LLDEA R+++ L R
Sbjct: 417 ELLDEAVERAESDLRRR 433
>sp|Q7V493|SYR_PROMM Arginine--tRNA ligase OS=Prochlorococcus marinus (strain MIT 9313)
GN=argS PE=3 SV=1
Length = 612
Score = 343 bits (881), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 192/437 (43%), Positives = 268/437 (61%), Gaps = 40/437 (9%)
Query: 10 NVKRELEKVFDLALKATVPNETDVRPLIA-ACTAKFGDYQCNNAMGLWSKIKGKGTEFKG 68
++ +++ F A + + T + P +A A +FGD+Q N A+ L +K +
Sbjct: 20 QLRAAIDRAFPEAAASARESGTGLDPQLAPASKPEFGDFQANAALPLAKPLK------QP 73
Query: 69 PQPVGQAIMKNLPPSEMIESC--------SVAGPGFVNVVLSKNWMAKNIQKMLVDG--- 117
P+ + AI+ L M+++ +AGPGF+N+ + +A +Q L D
Sbjct: 74 PRQIAAAIVDQL----MVDTAFTAICLTPEIAGPGFINLTVRPECLAAEVQARLADARLG 129
Query: 118 ---IETWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHV 174
+E + VVDFSSPNIAKEMHVGHLRSTIIGDSLAR+LEF VLR NHV
Sbjct: 130 VPLVEGDNDGQQPTPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHPVLRLNHV 189
Query: 175 GDWGTQFGMLIEYLFEKFPNS-EDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVR 233
GDWGTQFGMLI +L + P + E A+ +G+L FYR++K RFD D AF+ +++ VV+
Sbjct: 190 GDWGTQFGMLITHLKQVAPEALETADAVDLGDLVVFYRQAKQRFDDDEAFQTTSREEVVK 249
Query: 234 LQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVE 293
LQ G+P +AW+ +C+ SR+EF K+Y RL V L E+GESFYN Y+ V+++L+ GL+
Sbjct: 250 LQGGDPISLKAWSLLCDQSRREFQKIYDRLDVRLNERGESFYNAYLESVVEDLNVSGLLV 309
Query: 294 ESQGARVIFIEGVN------IPLIIVKSDGGFNYASTDLAALWYRL----NEEKAEWIIY 343
GA+ +F+EGV +P+I+ KSDGGFNYA+TDLAA+ YR + A +IY
Sbjct: 310 SDDGAQCVFLEGVTGKDGKPLPVIVQKSDGGFNYATTDLAAMRYRFAAPPQGDGARRVIY 369
Query: 344 VTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLV 403
VTD GQ HF VF A+RAGW+ + HV FGLV GEDGK+L+TR + VRL
Sbjct: 370 VTDAGQANHFAGVFQVAQRAGWI----PDAGRLQHVPFGLVQGEDGKKLKTRAGDTVRLR 425
Query: 404 DLLDEAKNRSKAVLIER 420
+LLDEA R+++ L R
Sbjct: 426 ELLDEAVERAESDLRRR 442
>sp|Q0I6R7|SYR_SYNS3 Arginine--tRNA ligase OS=Synechococcus sp. (strain CC9311) GN=argS
PE=3 SV=1
Length = 590
Score = 342 bits (876), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 189/401 (47%), Positives = 252/401 (62%), Gaps = 27/401 (6%)
Query: 36 LIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIES-C---SV 91
L A +FGD+Q N A+ L +K + P+ + AI++ L + C +
Sbjct: 31 LAPANKPEFGDFQANGALPLAKPLK------QAPRLIAGAIVEALQADPAFAALCLEPQI 84
Query: 92 AGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKLRVKKAVV-DFSSPNIAKEMHVGHLRS 150
AGPGF+N+ + +A + L D P+++ AVV DFSSPNIAKEMHVGHLRS
Sbjct: 85 AGPGFINLTIRPERLAAEVSARLGDP-RLGVPEVQSDAAVVVDFSSPNIAKEMHVGHLRS 143
Query: 151 TIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSED-ANETAIGELQEF 209
TIIGDSLAR+LEF VLR NHVGDWGTQFGMLI +L + P + + A+ +G+L F
Sbjct: 144 TIIGDSLARVLEFRGHRVLRLNHVGDWGTQFGMLITHLKQVAPETLNRADAVDLGDLVAF 203
Query: 210 YRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLEE 269
YR +K RFD D AF+ +++ VV+LQ G+P +AW +C+ SR+EF K+Y RL + L E
Sbjct: 204 YREAKKRFDEDEAFQATSREEVVKLQGGDPVSLKAWGLLCDQSRREFQKIYDRLDIRLSE 263
Query: 270 KGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN------IPLIIVKSDGGFNYAS 323
+GESFYNPY+ V+ L + L+ GA +F+EGVN +P+I+ KSDGGFNYA+
Sbjct: 264 RGESFYNPYLASVLSGLKEADLLVTDDGAECVFLEGVNGKDGKPLPVIVRKSDGGFNYAT 323
Query: 324 TDLAALWYRL----NEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHV 379
TDLAA+ YR + + A +IYVTD GQ HF VF AKRA W+ + + HV
Sbjct: 324 TDLAAIRYRFALAPDGDGARRVIYVTDAGQANHFAGVFQVAKRANWI----PEHGRLEHV 379
Query: 380 GFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER 420
FGLV GEDGK+L+TR + VRL DLLDEA R++A L R
Sbjct: 380 PFGLVQGEDGKKLKTRSGDTVRLRDLLDEAVERAEADLRRR 420
>sp|Q31CZ4|SYR_PROM9 Arginine--tRNA ligase OS=Prochlorococcus marinus (strain MIT 9312)
GN=argS PE=3 SV=1
Length = 604
Score = 341 bits (874), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 184/394 (46%), Positives = 255/394 (64%), Gaps = 23/394 (5%)
Query: 44 FGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSK 103
FGDYQCN + L K K E + + KN S++ +S +AGPGF+N+ L
Sbjct: 45 FGDYQCNVCLCLSKIYKKKPREI--SEDFVYLLNKNKSISKLCKSLEIAGPGFINIKLKD 102
Query: 104 ----NWMAKNIQ--KMLVDGIETWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSL 157
N + NIQ + + I+ K +VDFSSPNIAKEMHVGHLRSTIIGDS+
Sbjct: 103 EVLINEIKSNIQCPRAGIPLIKKDLDSGLSNKVIVDFSSPNIAKEMHVGHLRSTIIGDSI 162
Query: 158 ARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNS-EDANETAIGELQEFYRRSKNR 216
+R+ E +VLR NHVGDWGTQFGMLI L + + N E+ + I +L EFY+ SK R
Sbjct: 163 SRIFELRGYQVLRLNHVGDWGTQFGMLITQLKDLYSNDLEEIGKIKISDLVEFYKASKKR 222
Query: 217 FDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESFYN 276
FD++ F++R+++ VV+LQSG+ K +AW +C+ SRKEFD++YK L++ ++E+GESFYN
Sbjct: 223 FDNESEFQKRSREEVVKLQSGDSKSIQAWKLLCDQSRKEFDEIYKNLKIKIKERGESFYN 282
Query: 277 PYIPGVIDELSKQGLVEESQGARVIFIEGVN------IPLIIVKSDGGFNYASTDLAALW 330
P++ VI++L + ++ E QGA+ +F++G+ +PLI+ K DGGFNYA+TDLAA+
Sbjct: 283 PFLKSVIEDLKFKKILIEDQGAKCVFLDGMTNKEGKPLPLIVQKKDGGFNYATTDLAAIR 342
Query: 331 YRLNE----EKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLG 386
YR N+ + A IIYVTD GQ HF VF AK+A W+ + HV FGLV G
Sbjct: 343 YRFNKAPNGDDASRIIYVTDHGQANHFAGVFQVAKKAKWIPDK----CQVDHVPFGLVQG 398
Query: 387 EDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER 420
DGK+L+TR E +RL DLL+EA R+K L++R
Sbjct: 399 IDGKKLKTREGETIRLKDLLNEAVRRAKEDLLKR 432
>sp|Q5L6U4|SYR_CHLAB Arginine--tRNA ligase OS=Chlamydophila abortus (strain S26/3)
GN=argS PE=3 SV=1
Length = 562
Score = 339 bits (870), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 179/400 (44%), Positives = 255/400 (63%), Gaps = 23/400 (5%)
Query: 22 ALKATVPNETDVRPLIAACTAK-FGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNL 80
A+ + P + P I T + FG YQCN+AM L +K P+ + ++I+K +
Sbjct: 14 AILSAFPQIETISPDITQSTKELFGHYQCNDAMKLARTLK------MPPRAIAESIVKQI 67
Query: 81 PPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKM---LVDGIETWAPKLRVKKAVVDFSSP 137
+ S +AG GF+N SK ++ ++Q L G PK K V+DFSSP
Sbjct: 68 SKNNF-SSIEIAGAGFINFTFSKEFLNLSLQSYSRDLSSGFRVQDPK----KVVIDFSSP 122
Query: 138 NIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSED 197
NIAK+MHVGHLRSTIIGD LAR+ F +VLR NH+GDWGT FGMLI YL E+ +SED
Sbjct: 123 NIAKDMHVGHLRSTIIGDCLARIFTFVGHDVLRLNHIGDWGTAFGMLITYLQEE--SSED 180
Query: 198 ANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFD 257
++ +L Y+++ RF D FK+R+Q VV LQSG+PK + W +ICEIS + F
Sbjct: 181 IE--SLEDLTILYKKAHVRFAEDAEFKKRSQTNVVALQSGDPKARKLWERICEISERAFQ 238
Query: 258 KVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVNIPLIIVKSDG 317
K+Y L + +E++GESFYNP++P +I++L K+ L+ S A+ +F EG +IPL++ K DG
Sbjct: 239 KIYNILDIQIEKRGESFYNPFLPEIIEDLEKKNLITVSDEAKCVFHEGFSIPLMVQKRDG 298
Query: 318 GFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKAS 377
G+NYA+TDLAA+ YR+ ++ A+ II VTD+GQ LHF ++ + A AG+L D S
Sbjct: 299 GYNYATTDLAAMRYRVEQDHADRIIIVTDMGQSLHFQLLEATALAAGYLPNKDVF----S 354
Query: 378 HVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVL 417
HVGFGLVL +GK+ +TR E ++L +LLD A +++ A L
Sbjct: 355 HVGFGLVLDSEGKKFKTRSGENIKLQELLDTAIDQAVATL 394
>sp|Q7V396|SYR_PROMP Arginine--tRNA ligase OS=Prochlorococcus marinus subsp. pastoris
(strain CCMP1986 / MED4) GN=argS PE=3 SV=1
Length = 603
Score = 338 bits (866), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 183/410 (44%), Positives = 259/410 (63%), Gaps = 46/410 (11%)
Query: 39 ACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPP----SEMIESCSVAGP 94
A +FGDYQCN + L K P+ + A ++ L S + E+ +AGP
Sbjct: 40 ASKEEFGDYQCNICLVLSKIYKS------NPREIAIAFIETLKENKKISNLCENLEIAGP 93
Query: 95 GFVNVVLSKNWMAKNIQKMLVDGIET--WAPKLRV-----------KKAVVDFSSPNIAK 141
GF+N+ L K+L++ I++ P+ V KK +VDFSSPNIAK
Sbjct: 94 GFINIKLK--------NKVLIEAIKSNIKCPRAGVPLSHKNNIYSKKKVIVDFSSPNIAK 145
Query: 142 EMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNS-EDANE 200
EMHVGHLRSTIIGDS++++ EF VLR NH+GDWGTQFGMLI L + + + ++ +
Sbjct: 146 EMHVGHLRSTIIGDSISKIFEFRGYIVLRLNHIGDWGTQFGMLITQLKDLYSSDLKEIDR 205
Query: 201 TAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVY 260
I +L EFY+ SK RFD++ F++R+++ VV+LQSG+ K EAW +C SRKEFD++Y
Sbjct: 206 IKISDLVEFYKASKKRFDNETEFQKRSREEVVQLQSGDKKSIEAWKLLCNQSRKEFDQIY 265
Query: 261 KRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN------IPLIIVK 314
K L + ++E+GESFYNP++ +I++L+ + ++ E QGA+ +F++G+ +PLII K
Sbjct: 266 KTLNIKIKERGESFYNPFLKSIIEDLNYKKILIEDQGAKCVFLDGMTNKEGNPLPLIIQK 325
Query: 315 SDGGFNYASTDLAALWYRLNEE----KAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADD 370
DGGFNYA+TDLAAL YR +E A IIYVTD GQ HF VF AKRA W+ D
Sbjct: 326 KDGGFNYATTDLAALRYRFTKEPYGDNAARIIYVTDHGQSNHFAGVFQVAKRANWIPKD- 384
Query: 371 STYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER 420
+ +HV FGLV G DGK+L+TR + ++L DLL E+ R+K L++R
Sbjct: 385 ---CEVNHVPFGLVQGIDGKKLKTREGDTIKLKDLLSESVKRAKEDLLKR 431
>sp|Q824H4|SYR_CHLCV Arginine--tRNA ligase OS=Chlamydophila caviae (strain GPIC) GN=argS
PE=3 SV=1
Length = 564
Score = 338 bits (866), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 178/403 (44%), Positives = 253/403 (62%), Gaps = 23/403 (5%)
Query: 22 ALKATVPNETDVRPLIAACTAK-FGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNL 80
A + P P I T + FG YQCN+AM L +K P+ + +AI+ ++
Sbjct: 16 ATLSAFPQIDTFSPDITQSTKEHFGHYQCNDAMKLARTLK------MAPRAIAEAIVNHI 69
Query: 81 PPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKM---LVDGIETWAPKLRVKKAVVDFSSP 137
P E+ S +AG GF+N SK ++ +++ L G PK K V+DFSSP
Sbjct: 70 P-KEIFTSIEIAGAGFINFTFSKEFLNNSLKTFSEELSSGFRVKDPK----KVVIDFSSP 124
Query: 138 NIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSED 197
NIAK+MHVGHLRSTIIGD LAR+ F +V R NH+GDWGT FGMLI YL E+ P+ +
Sbjct: 125 NIAKDMHVGHLRSTIIGDCLARVFAFVGNDVSRLNHIGDWGTAFGMLITYLQEE-PSEDI 183
Query: 198 ANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFD 257
N + +L Y+++ RF D FK+R+Q VV LQ+G+P + W QIC IS + F
Sbjct: 184 EN---LEDLTVLYKKAHARFAEDAEFKKRSQTNVVALQAGDPSALKLWKQICAISERAFQ 240
Query: 258 KVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVNIPLIIVKSDG 317
K+Y L + +E++GESFYNP++P +I +L + L+ S A+ +F EG +IPL++ KSDG
Sbjct: 241 KIYNILDIAIEKRGESFYNPFLPEIIQDLENKNLITISDNAKCVFHEGFSIPLMVQKSDG 300
Query: 318 GFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKAS 377
G+NYA+TDLAA+ YR+N + A+ II VTD+GQ LHF ++ + A AG+L ++ S
Sbjct: 301 GYNYATTDLAAMRYRVNNDGADKIIIVTDMGQSLHFQLLEATALAAGYLPNKETF----S 356
Query: 378 HVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER 420
HVGFGLVL +GK+ +TR E ++L +LLD A +++KA L E
Sbjct: 357 HVGFGLVLDSEGKKFKTRSGENIKLKELLDTAIDQAKATLKEH 399
>sp|Q253D1|SYR_CHLFF Arginine--tRNA ligase OS=Chlamydophila felis (strain Fe/C-56)
GN=argS PE=3 SV=1
Length = 562
Score = 337 bits (865), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 182/400 (45%), Positives = 252/400 (63%), Gaps = 17/400 (4%)
Query: 22 ALKATVPNETDVRPLIAACTAK-FGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNL 80
A + P + P I T + FG YQCN+AM L +K P+ + +AI+ NL
Sbjct: 14 ATLSAFPQVENPSPDITQSTKEHFGHYQCNDAMKLDRTLK------MAPRAIAEAIVNNL 67
Query: 81 PPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKLRVKKAVVDFSSPNIA 140
P + S VAG GF+N SK ++ + ++ D + K KK V+DFSSPNIA
Sbjct: 68 P-KDNFSSVEVAGAGFINFTFSKEFLKQRLETFSADLSSGFCVK-DPKKIVIDFSSPNIA 125
Query: 141 KEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSEDANE 200
K+MHVGHLRSTIIGD LAR+ F +VLR NH+GDWGT FGMLI YL E+ SED
Sbjct: 126 KDMHVGHLRSTIIGDCLARVFSFVGNDVLRLNHIGDWGTAFGMLITYLQEE--ASEDVGN 183
Query: 201 TAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVY 260
+ +L Y+++ RF D FK+R+Q VV LQSG+P W ICEIS + F K+Y
Sbjct: 184 --LEDLTALYKKAHARFAEDVEFKKRSQANVVALQSGDPSALNLWKHICEISERAFQKIY 241
Query: 261 KRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVNIPLIIVKSDGGFN 320
L V +E++GESFYNP++P +I +L + L+ S A+ +F EG +IPL++ KSDGG+N
Sbjct: 242 DILGVAIEKRGESFYNPFLPEIIQDLENKKLITVSDNAKCVFHEGFSIPLMVQKSDGGYN 301
Query: 321 YASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVG 380
YA+TDLAA+ YR+ ++ A+ II VTD+GQ LHF ++ + A AG+L D T+ SHVG
Sbjct: 302 YATTDLAAMRYRVEKDHADKIIIVTDMGQSLHFQLLEATALAAGYLR-DKETF---SHVG 357
Query: 381 FGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER 420
FGLVL +GK+ +TR E ++L +LL+ A +++ A L E
Sbjct: 358 FGLVLDSEGKKFKTRSGENIKLKELLNTAVDQAVATLKEH 397
>sp|Q46HI6|SYR_PROMT Arginine--tRNA ligase OS=Prochlorococcus marinus (strain NATL2A)
GN=argS PE=3 SV=1
Length = 607
Score = 335 bits (859), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 193/415 (46%), Positives = 255/415 (61%), Gaps = 45/415 (10%)
Query: 36 LIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPP-SEMIESCS---V 91
L+ A +FGD+Q N A+ L +IK + P+ + Q I L ++ + C+ +
Sbjct: 38 LVPASKPEFGDFQINCALSLAKEIK------QPPREIAQKIANQLQKDNDFVRMCNPPRI 91
Query: 92 AGPGFVNVVLSKNWMAKNI-------------QKMLVDGIETWAPKLRVKKAVVDFSSPN 138
AGPGF+N+ ++ + I +K D IE RV ++DFSSPN
Sbjct: 92 AGPGFINLSINSKTLISEIHVRLNDKRLGVPLKKFSTDKIEEGKSNNRV---ILDFSSPN 148
Query: 139 IAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFP---NS 195
IAKEMHVGHLRSTIIGDSLAR+LEF EVLR NHVGDWGTQFGMLI +L E P ++
Sbjct: 149 IAKEMHVGHLRSTIIGDSLARILEFRGYEVLRLNHVGDWGTQFGMLITHLKEVVPEVLHT 208
Query: 196 EDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKE 255
+D E I +L FYR++K RFD D F+ +++ VV LQ+G+ + AW +C SRKE
Sbjct: 209 KDVVE--ISDLVNFYRQAKKRFDEDQIFQNKSRSEVVNLQAGDKESLIAWQLLCNQSRKE 266
Query: 256 FDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGV------NIP 309
F K+Y RL + L E+GESFYN ++ VI++L + L+ QGA+ IF++G+ P
Sbjct: 267 FQKIYDRLDIKLTERGESFYNKFLVDVINDLKNKKLLINDQGAQCIFLDGLVGKNGKPQP 326
Query: 310 LIIVKSDGGFNYASTDLAALWYRL----NEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGW 365
+II KSDGGFNYA+TDLAA+ YRL + + A +IYVTD GQ HF VF AK A W
Sbjct: 327 IIIQKSDGGFNYATTDLAAIKYRLTIPPHGDGACRLIYVTDAGQASHFSGVFQIAKLANW 386
Query: 366 LSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER 420
+ D + HV FGLV GEDGK+L+TR E +RLVDLLDEA R+K L R
Sbjct: 387 IPTD----CQIEHVPFGLVQGEDGKKLKTRSGETIRLVDLLDEAIQRAKNDLKNR 437
>sp|A2C016|SYR_PROM1 Arginine--tRNA ligase OS=Prochlorococcus marinus (strain NATL1A)
GN=argS PE=3 SV=1
Length = 607
Score = 335 bits (859), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 192/415 (46%), Positives = 255/415 (61%), Gaps = 45/415 (10%)
Query: 36 LIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPP-SEMIESCS---V 91
L+ A +FGD+Q N A+ L +I + P+ + Q I K L ++ + C+ +
Sbjct: 38 LVPASKPEFGDFQINCALSLAKEIN------RPPRDIAQQIAKQLQQDNDFVRICNPPLI 91
Query: 92 AGPGFVNVVLSKNWMAKNI-------------QKMLVDGIETWAPKLRVKKAVVDFSSPN 138
AGPGF+N+ ++ + I +K D IE RV ++DFSSPN
Sbjct: 92 AGPGFINLSINSKTLISEIHFRLNDKRLGVPLKKFNTDKIEEEKSNNRV---IIDFSSPN 148
Query: 139 IAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFP---NS 195
IAKEMHVGHLRSTIIGDSLAR+LEF EVLR NHVGDWGTQFGMLI +L E P ++
Sbjct: 149 IAKEMHVGHLRSTIIGDSLARVLEFCGYEVLRLNHVGDWGTQFGMLITHLKEVVPEVLHT 208
Query: 196 EDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKE 255
+D E I +L FYR++K RFD D F+ +++ VV LQ+G+ + AW +C SRKE
Sbjct: 209 KDVVE--ISDLVNFYRQAKKRFDEDQIFQNKSRSEVVNLQAGDKESLIAWQLLCNQSRKE 266
Query: 256 FDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGV------NIP 309
F K+Y RL + L E+GESFYN ++ VI++L + L+ QGA+ IF++G+ P
Sbjct: 267 FQKIYDRLDIKLTERGESFYNKFLVDVINDLKNKKLLINDQGAQCIFLDGLVGKDGKPQP 326
Query: 310 LIIVKSDGGFNYASTDLAALWYRL----NEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGW 365
+II KSDGGFNYA+TDLAA+ YRL + + A +IYVTD GQ HF VF AK A W
Sbjct: 327 IIIQKSDGGFNYATTDLAAIKYRLTIPPHGDGACRLIYVTDAGQASHFSGVFQIAKLANW 386
Query: 366 LSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER 420
+ D + HV FGLV GEDGK+L+TR E +RLVDLLDEA R++ L R
Sbjct: 387 IPTD----CQIEHVPFGLVQGEDGKKLKTRSGETIRLVDLLDEAIQRARDDLKNR 437
>sp|Q3KLP4|SYR_CHLTA Arginine--tRNA ligase OS=Chlamydia trachomatis serovar A (strain
HAR-13 / ATCC VR-571B) GN=argS PE=3 SV=1
Length = 563
Score = 330 bits (846), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 167/380 (43%), Positives = 241/380 (63%), Gaps = 28/380 (7%)
Query: 44 FGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSK 103
FG YQCN+AM L ++ K P+ + ++I+ ++PP+ S +AG GF+N SK
Sbjct: 38 FGHYQCNDAMKLARVLR------KSPRAIAESIVAHIPPAPF-SSIEIAGAGFINFTFSK 90
Query: 104 NWMAKNIQ---KMLVDGIETWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARM 160
++A +Q K L +G +P+ K ++DFSSPNIAK+MHVGHLRSTIIGD LAR
Sbjct: 91 EFLASQLQTFSKELANGFRAASPQ----KVIIDFSSPNIAKDMHVGHLRSTIIGDCLARC 146
Query: 161 LEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSEDANETAIGELQEF---YRRSKNRF 217
F +VLR NH+GDWGT FGMLI YL ++ ++ AI +L++ Y+++ RF
Sbjct: 147 FSFVGHDVLRLNHIGDWGTAFGMLITYL-------QETSQEAIHQLEDLTALYKKAHARF 199
Query: 218 DSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNP 277
D FK+R+Q VV LQSG+ + W QIC +S K F +Y L V+L +GESFYNP
Sbjct: 200 AEDSEFKKRSQHNVVALQSGDAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNP 259
Query: 278 YIPGVIDELSKQGLVEESQGARVIFIEGVNIPLIIVKSDGGFNYASTDLAALWYRLNEEK 337
++ V+ +L + LV S GA+ +F E +IPL+I KSDGG+NYA+TD+AA+ YR+ +++
Sbjct: 260 FLAEVVADLESKNLVTLSDGAKCVFHEAFSIPLMIQKSDGGYNYATTDVAAMRYRIQQDQ 319
Query: 338 AEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFS 397
A+ I+ VTD GQ LHF ++ + AG+L + SHVGFGLVL G++ +TR
Sbjct: 320 ADRILIVTDSGQSLHFQLLEATCLAAGYLPSKGIF----SHVGFGLVLDTQGRKFKTRSG 375
Query: 398 EVVRLVDLLDEAKNRSKAVL 417
E ++L +LLD A ++K L
Sbjct: 376 ENIKLRELLDTAVEKAKESL 395
>sp|Q9PJT8|SYR_CHLMU Arginine--tRNA ligase OS=Chlamydia muridarum (strain MoPn / Nigg)
GN=argS PE=3 SV=1
Length = 563
Score = 330 bits (845), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 172/395 (43%), Positives = 243/395 (61%), Gaps = 31/395 (7%)
Query: 32 DVRPLIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIESCSV 91
D+ P + FG YQCN+AM L ++ K P+ + + I+ ++P + S +
Sbjct: 29 DITP---STKEHFGHYQCNDAMKLARALR------KSPRAIAEEIVAHIPATPF-SSIEI 78
Query: 92 AGPGFVNVVLSKNWMAKNIQ---KMLVDGIETWAPKLRVKKAVVDFSSPNIAKEMHVGHL 148
AG GF+N SK ++A +Q + L G +P+ K ++DFSSPNIAK+MHVGHL
Sbjct: 79 AGAGFINFTFSKEFLANQLQIFSQELAKGFPVSSPQ----KVIIDFSSPNIAKDMHVGHL 134
Query: 149 RSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSEDANETAIGELQ- 207
RSTIIGD LAR F +VLR NH+GDWGT FGMLI YL ++ +T I +L+
Sbjct: 135 RSTIIGDCLARCFSFVGHDVLRLNHIGDWGTAFGMLITYL-------QETAQTDIHQLEN 187
Query: 208 --EFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRV 265
E Y+++ RF DP FK+R+Q VV LQSG+P+ W QIC +S K F K+Y L V
Sbjct: 188 LTELYKKAHVRFAEDPEFKKRSQYNVVALQSGDPQALALWKQICAVSEKSFQKIYSILDV 247
Query: 266 DLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVNIPLIIVKSDGGFNYASTD 325
+L +GESFYNP++ V+ +L + LV S GA+ +F E +IPL+I KSDGG+NYA+TD
Sbjct: 248 ELHTRGESFYNPFLADVVSDLESKNLVTLSDGAKCVFHEEFSIPLMIQKSDGGYNYATTD 307
Query: 326 LAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVL 385
+AA+ YR+ ++ A+ I+ VTD GQ LHF ++ + AG+L SHVGFGLVL
Sbjct: 308 VAAMRYRIQQDHADRILIVTDSGQSLHFQLLEATCLAAGYLPHKGI----FSHVGFGLVL 363
Query: 386 GEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER 420
G++ +TR E ++L +LLD A ++K L E
Sbjct: 364 DTQGRKFKTRSGENIKLQELLDTAIEKAKESLREH 398
>sp|O84460|SYR_CHLTR Arginine--tRNA ligase OS=Chlamydia trachomatis (strain D/UW-3/Cx)
GN=argS PE=3 SV=1
Length = 563
Score = 329 bits (843), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 167/380 (43%), Positives = 240/380 (63%), Gaps = 28/380 (7%)
Query: 44 FGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSK 103
FG YQCN+AM L + K P+ + ++I+ ++PP+ S +AG GF+N SK
Sbjct: 38 FGHYQCNDAMKLARVLH------KSPRAIAESIVAHIPPTPF-SSIEIAGAGFINFTFSK 90
Query: 104 NWMAKNIQ---KMLVDGIETWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARM 160
++A +Q K L +G +P+ K ++DFSSPNIAK+MHVGHLRSTIIGD LAR
Sbjct: 91 EFLASQLQTFSKELANGFRAASPQ----KVIIDFSSPNIAKDMHVGHLRSTIIGDCLARC 146
Query: 161 LEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSEDANETAIGELQEF---YRRSKNRF 217
F +VLR NH+GDWGT FGMLI YL ++ ++ AI +L++ Y+++ RF
Sbjct: 147 FSFVGHDVLRLNHIGDWGTAFGMLITYL-------QETSQEAIHQLEDLTALYKKAHARF 199
Query: 218 DSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNP 277
D FK+R+Q VV LQSG+ + W QIC +S K F +Y L V+L +GESFYNP
Sbjct: 200 AEDSEFKKRSQHNVVALQSGDAQALALWKQICSVSEKSFQTIYSILDVELHTRGESFYNP 259
Query: 278 YIPGVIDELSKQGLVEESQGARVIFIEGVNIPLIIVKSDGGFNYASTDLAALWYRLNEEK 337
++ V+ +L + LV S GA+ +F E +IPL+I KSDGG+NYA+TD+AA+ YR+ +++
Sbjct: 260 FLAEVVADLESKNLVTLSDGAKCVFHEAFSIPLMIQKSDGGYNYATTDVAAMRYRIQQDQ 319
Query: 338 AEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFS 397
A+ I+ VTD GQ LHF ++ + AG+L + SHVGFGLVL G++ +TR
Sbjct: 320 ADRILIVTDSGQSLHFQLLEATCLAAGYLPSKGIF----SHVGFGLVLDTQGRKFKTRSG 375
Query: 398 EVVRLVDLLDEAKNRSKAVL 417
E ++L +LLD A ++K L
Sbjct: 376 ENIKLRELLDTAVEKAKESL 395
>sp|Q9Z7Y3|SYR_CHLPN Arginine--tRNA ligase OS=Chlamydia pneumoniae GN=argS PE=3 SV=1
Length = 561
Score = 328 bits (842), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 180/405 (44%), Positives = 252/405 (62%), Gaps = 29/405 (7%)
Query: 22 ALKATVPNETDVRPLIAACTAK-FGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNL 80
A+ PN D P I T + FG YQCN+AM L +K K P+ + +AI+ L
Sbjct: 15 AIAKAFPNLEDWAPEITPSTKEHFGHYQCNDAMKLARVLK------KAPRAIAEAIVAEL 68
Query: 81 P--PSEMIESCSVAGPGFVNVVLSKNWMAKNIQKM---LVDGIETWAPKLRVKKAVVDFS 135
P P +IE +AG GF+N S ++ + ++ L G + PK K ++DFS
Sbjct: 69 PQEPFSLIE---IAGAGFINFTFSPVFLNQQLEHFKDALKLGFQVSQPK----KIIIDFS 121
Query: 136 SPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNS 195
SPNIAK+MHVGHLRSTIIGDSLAR+ + +VLR NH+GDWGT FGMLI YL E +
Sbjct: 122 SPNIAKDMHVGHLRSTIIGDSLARIFSYVGHDVLRLNHIGDWGTAFGMLITYLQENPCDY 181
Query: 196 EDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKE 255
D + +L Y+++ F +D FK+R+QQ VV LQ+ +P+ W +ICE S K
Sbjct: 182 SD-----LEDLTSLYKKAYVCFTNDEEFKKRSQQNVVALQAKDPQAIAIWEKICETSEKA 236
Query: 256 FDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVNIPLIIVKS 315
F K+Y L + +E++GESFYNP++P +I++L K+GL+ S A+ +F E +IP ++ KS
Sbjct: 237 FQKIYDILDIVVEKRGESFYNPFLPEIIEDLEKKGLLTVSNDAKCVFHEAFSIPFMVQKS 296
Query: 316 DGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPK 375
DGG+NYA+TDLAA+ YR+ E+ A+ II VTD+GQ LHF ++ + A AG+L
Sbjct: 297 DGGYNYATTDLAAMRYRIEEDHADKIIIVTDLGQSLHFQLLEATAIAAGYLQPG-----I 351
Query: 376 ASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIER 420
SHVGFGLVL GK+L+TR E V+L +LLD A +++ L E
Sbjct: 352 FSHVGFGLVLDPQGKKLKTRSGENVKLRELLDTAIEKAEEALREH 396
>sp|Q3AVY5|SYR_SYNS9 Arginine--tRNA ligase OS=Synechococcus sp. (strain CC9902) GN=argS
PE=3 SV=1
Length = 590
Score = 324 bits (831), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 193/428 (45%), Positives = 259/428 (60%), Gaps = 27/428 (6%)
Query: 10 NVKRELEKVFDLALKATVPN-ETDVRP-LIAACTAKFGDYQCNNAMGLWSKIKGKGTEFK 67
++ + L+ A++ P+ E + P L AA +FGD+Q N A+ L +K +
Sbjct: 3 SLSQTLDAQLRAAMQRAFPDAEATLDPQLAAASKPEFGDFQANGALPLAKPLK------Q 56
Query: 68 GPQPVGQAIMKNLPPSEMIES-C---SVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAP 123
P+ + AI+ L E + C +AGPGF+N+ + +A+ + L
Sbjct: 57 PPRQIATAIVDQLSGDEAFNALCLAPQIAGPGFINLTIRPERLAEELAARLGTDRLGVPV 116
Query: 124 KLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGM 183
V VVDFSSPNIAKEMHVGHLRSTIIGDSLAR+LEF VLR NHVGDWGTQFGM
Sbjct: 117 VEDVAPVVVDFSSPNIAKEMHVGHLRSTIIGDSLARVLEFRGHSVLRLNHVGDWGTQFGM 176
Query: 184 LIEYLFEKFPNSED-ANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYH 242
LI +L + P + D A+ +G+L FYR +K RFD D F+ ++ VV+LQ G+P
Sbjct: 177 LITHLKQVAPETLDTADAVDLGDLVAFYREAKKRFDDDDDFQATSRDEVVKLQGGDPVSL 236
Query: 243 EAWAQICEISRKEFDKVYKRLRVDLEEKGESFYNPYIPGVIDELSKQGLVEESQGARVIF 302
+AW +C+ SR+EF K+Y RL + L E+GESFYNPY+P V+D L L+ GA+ +F
Sbjct: 237 KAWGLLCDQSRREFQKLYDRLDIRLTERGESFYNPYLPAVLDGLKAVDLLVTDDGAQCVF 296
Query: 303 IEGVN------IPLIIVKSDGGFNYASTDLAALWYRLNE----EKAEWIIYVTDVGQQLH 352
+EGV +P+I+ K DGGFNYA+TDLAA+ +R + A+ +IYVTD GQ H
Sbjct: 297 LEGVTGKDGNPLPVIVQKRDGGFNYATTDLAAIRFRFASPPTGDAAQRVIYVTDAGQANH 356
Query: 353 FDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNR 412
F VF A+RAGW+ + HV FGLV GEDGK+L+TR + VRL DLLDEA R
Sbjct: 357 FAGVFQVAERAGWI----PDGARLEHVPFGLVQGEDGKKLKTRAGDTVRLRDLLDEAVER 412
Query: 413 SKAVLIER 420
S+ L R
Sbjct: 413 SEQDLRSR 420
>sp|Q2SMY0|SYR_HAHCH Arginine--tRNA ligase OS=Hahella chejuensis (strain KCTC 2396)
GN=argS PE=3 SV=1
Length = 578
Score = 320 bits (820), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 175/420 (41%), Positives = 254/420 (60%), Gaps = 25/420 (5%)
Query: 10 NVKRELEKVFDLALKATVPNETDVRPLIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGP 69
N+++ LE+ AL A E + + +FGDYQ N MG +K P
Sbjct: 2 NLQQLLEQKISAALHAAGAPEGSPAIVKPSGKPQFGDYQANGVMGAAKALK------MNP 55
Query: 70 QPVGQAIMKNLPPSEMIESCSVAGPGFVNVVLSKNWMAKNIQKMLVD---GIETWAPKLR 126
+ + ++ L +M E +AGPGF+N+ LSK+WM+++++++L D I +PK
Sbjct: 56 RELATKVLDVLDLGDMAEKVEIAGPGFINIFLSKDWMSQSLRQVLADPRLTIPLDSPKQT 115
Query: 127 VKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIE 186
V VVD+S+PN+AKEMHVGHLRSTIIGD++ R LEF V+R+NHVGDWGTQFGML+
Sbjct: 116 V---VVDYSAPNLAKEMHVGHLRSTIIGDAVVRTLEFLGHRVIRQNHVGDWGTQFGMLLA 172
Query: 187 YLFEKFPNSEDANETAIGELQEFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWA 246
Y+ + ++ + +L+ FYR++K FD DP FK+ A+Q VV+LQSG+ + W
Sbjct: 173 YMNKLKAENQQTLSMELADLENFYRQAKTCFDEDPEFKDSARQYVVKLQSGDQECVSLWK 232
Query: 247 QICEISRKEFDKVYKRLRVDLEEKG---ESFYNPYIPGVIDELSKQGLVEESQGARVIFI 303
+IS + + VY+RL V L ES YN +P VID+L ++GL+ S GA +F+
Sbjct: 233 TFIDISLQHCEDVYERLNVSLTRADVMPESAYNEDLPNVIDDLREKGLLTNSDGAECVFM 292
Query: 304 EGV------NIPLIIVKSDGGFNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVF 357
+ +PLI+ KSDGG+ YA+TDLAAL YR KA ++Y D Q LH + V+
Sbjct: 293 DEFKGKDDETLPLIVKKSDGGYLYATTDLAALRYRERVLKANRVLYFVDARQSLHLNQVY 352
Query: 358 SAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVL 417
+A ++AG++S D S H+ FG+VLG DGK +TR V+L DLL EA+ R+ AV+
Sbjct: 353 AAGRKAGFVSPDMSL----EHMAFGMVLGADGKPFKTRDGGTVKLADLLTEAQGRAYAVV 408
>sp|Q47TB0|SYR_THEFY Arginine--tRNA ligase OS=Thermobifida fusca (strain YX) GN=argS
PE=3 SV=1
Length = 576
Score = 311 bits (796), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 166/401 (41%), Positives = 245/401 (61%), Gaps = 24/401 (5%)
Query: 28 PNETDVRPLIAACTAKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIE 87
P D P+I ++F D+Q N A+ L +++ + P+ V AI ++L S++
Sbjct: 22 PEYRDTDPVIRP--SQFADFQANVALALAKRLR------RSPRDVATAITEHLDISDVCS 73
Query: 88 SCSVAGPGFVNVVLSKNWMAKNIQKMLVDGIETWAPKLRVKKAVVDFSSPNIAKEMHVGH 147
++GPGF+N+ L +W+A + +L D P + +D+S+PN+AKEMHVGH
Sbjct: 74 KVEISGPGFINLTLRDDWIAHQVHDLLTDE-RLGTPVQESQNIPIDYSAPNVAKEMHVGH 132
Query: 148 LRSTIIGDSLARMLEFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSEDANETAIGELQ 207
LR+T++GD+LAR+LEF V+R+NH+GDWGT FGMLIE+L E +S +A + +
Sbjct: 133 LRTTVVGDALARILEFLGHHVIRQNHIGDWGTPFGMLIEHLLEVGEDSAEAAQLK-SDPN 191
Query: 208 EFYRRSKNRFDSDPAFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDL 267
FY+ ++ +FDSD F +RA++ VV LQSG+ + W + E+S+ F+++Y++L V L
Sbjct: 192 AFYQAARAKFDSDEDFADRARRRVVALQSGDAETLRLWRDLIELSKIYFNRIYRKLDVTL 251
Query: 268 EE---KGESFYNPYIPGVIDELSKQGLVEESQGARVIFIEGVN------IPLIIVKSDGG 318
+ GES YN + V DEL+++GL S GA +F+EG +PLII KSDGG
Sbjct: 252 TDAHLAGESTYNDMLGPVCDELAEKGLAVVSDGALCVFLEGFTGREGKPVPLIIRKSDGG 311
Query: 319 FNYASTDLAALWYRLNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASH 378
+ YA+TDLA + YR+ + KA+ IIYV Q LH MV+ A++AGWL + H
Sbjct: 312 YGYATTDLATIKYRVEQLKADRIIYVVGAPQSLHLRMVYETARQAGWLGNAEPI-----H 366
Query: 379 VGFGLVLGEDGKRLRTRFSEVVRLVDLLDEAKNRSKAVLIE 419
V G VLG DGK LRTR VRL+ LLDEA R+ AV+ +
Sbjct: 367 VQIGNVLGSDGKILRTRSGAPVRLMALLDEAVERASAVVAQ 407
>sp|Q5F835|SYR_NEIG1 Arginine--tRNA ligase OS=Neisseria gonorrhoeae (strain ATCC 700825
/ FA 1090) GN=argS PE=3 SV=1
Length = 572
Score = 311 bits (796), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 168/388 (43%), Positives = 238/388 (61%), Gaps = 22/388 (5%)
Query: 42 AKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVL 101
A+ GD+Q N MG K K + P+ + Q + L + +IES VAGPGF+N+ L
Sbjct: 33 AEHGDFQINGVMGAAKKAK------QNPRELAQKVADALAGNAVIESAEVAGPGFINLRL 86
Query: 102 SKNWMAKNIQKMLVDGIETWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARML 161
++A+NI L D A + + V+D+SSPN+AKEMHVGHLRS+IIGDS++R+L
Sbjct: 87 RHEFLAQNIHAALNDARFGVAKTAQPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSISRVL 146
Query: 162 EFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSEDANETAIGELQEFYRRSKNRFDSDP 221
EF+ V+R+NHVGDWGTQFGML+ YL E+ +D + +L++FYR +K RFD DP
Sbjct: 147 EFTGNTVIRQNHVGDWGTQFGMLVAYLVEQ---QKDNAAFELADLEQFYRAAKVRFDEDP 203
Query: 222 AFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLEEK---GESFYNPY 278
AF + A++ VV+LQ G+ W Q +IS VY L + L + GES YN
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKYNDD 263
Query: 279 IPGVIDELSKQGLVEESQGARVIFI------EGVNIPLIIVKSDGGFNYASTDLAALWYR 332
+ V D+L ++GL E GA+V+F+ EG I+ K GGF YASTDLA L YR
Sbjct: 264 LQPVADDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACLRYR 323
Query: 333 LNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRL 392
+ KA ++YV D Q LHF+ +F+ +++AG+L D KA +GFG ++G+DGK
Sbjct: 324 IGRLKAGRLLYVVDHRQALHFEQLFTTSRKAGYLPED----AKAEFIGFGTMMGKDGKPF 379
Query: 393 RTRFSEVVRLVDLLDEAKNRSKAVLIER 420
+TR + V+LVDLL EA R+ A++ E+
Sbjct: 380 KTRSGDTVKLVDLLTEAVERATALVKEK 407
>sp|B4RL22|SYR_NEIG2 Arginine--tRNA ligase OS=Neisseria gonorrhoeae (strain NCCP11945)
GN=argS PE=3 SV=1
Length = 572
Score = 309 bits (791), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 167/388 (43%), Positives = 238/388 (61%), Gaps = 22/388 (5%)
Query: 42 AKFGDYQCNNAMGLWSKIKGKGTEFKGPQPVGQAIMKNLPPSEMIESCSVAGPGFVNVVL 101
A+ GD+Q N MG K K + P+ + Q + L + +IES VAGPGF+N+ L
Sbjct: 33 AEHGDFQINGVMGAAKKAK------QNPRELAQKVADALAGNAVIESAEVAGPGFINLRL 86
Query: 102 SKNWMAKNIQKMLVDGIETWAPKLRVKKAVVDFSSPNIAKEMHVGHLRSTIIGDSLARML 161
++A+NI L D A + + V+D+SSPN+AKEMHVGHLRS+IIGDS++R+L
Sbjct: 87 RHEFLAQNIHAALNDARFGVAKTAQPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSISRVL 146
Query: 162 EFSNVEVLRRNHVGDWGTQFGMLIEYLFEKFPNSEDANETAIGELQEFYRRSKNRFDSDP 221
EF+ V+R+NHVGDWGTQFGML+ YL E+ +D + +L++FYR +K RFD DP
Sbjct: 147 EFTGNTVIRQNHVGDWGTQFGMLVAYLVEQ---QKDNAAFELADLEQFYRAAKVRFDEDP 203
Query: 222 AFKERAQQAVVRLQSGEPKYHEAWAQICEISRKEFDKVYKRLRVDLEEK---GESFYNPY 278
AF + A++ VV+LQ G+ W Q +IS VY L + L + GES YN
Sbjct: 204 AFADTAREYVVKLQGGDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKYNDD 263
Query: 279 IPGVIDELSKQGLVEESQGARVIFI------EGVNIPLIIVKSDGGFNYASTDLAALWYR 332
+ V D+L ++GL E GA+V+F+ EG I+ K GGF YASTDLA L YR
Sbjct: 264 LQPVADDLVQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACLRYR 323
Query: 333 LNEEKAEWIIYVTDVGQQLHFDMVFSAAKRAGWLSADDSTYPKASHVGFGLVLGEDGKRL 392
+ KA ++YV D Q LHF+ +F+ +++AG+L + KA +GFG ++G+DGK
Sbjct: 324 IGRLKAGRLLYVVDHRQALHFEQLFTTSRKAGYLPEN----AKAEFIGFGTMMGKDGKPF 379
Query: 393 RTRFSEVVRLVDLLDEAKNRSKAVLIER 420
+TR + V+LVDLL EA R+ A++ E+
Sbjct: 380 KTRSGDTVKLVDLLTEAVERATALVKEK 407
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 162,353,730
Number of Sequences: 539616
Number of extensions: 6987098
Number of successful extensions: 22669
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 19813
Number of HSP's gapped (non-prelim): 936
length of query: 426
length of database: 191,569,459
effective HSP length: 120
effective length of query: 306
effective length of database: 126,815,539
effective search space: 38805554934
effective search space used: 38805554934
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)