Your job contains 1 sequence.
>014357
MAGRREKVQSIRGSRIAIAIVIGVLVGCVFAFLFPHGFFSSNLPIQDRQLVKKNVQAGSS
CESPERVNMLKSDIASLTEKNAELQKQVRQLTAKLRLAEQGKDQAQKQVMVLGEQHKVGP
FGTVKALRTNPTVVPDESVNPRLAKILEEVAVGKELIVALANSNVKSMLEVWSTNIKRVG
ITNYLVVALDDQTAEYCKTNDIPVYQRDPDEGIDSIARKGGNHAVSGLKFRVLREFLQLD
YSVLLSDIDIVFLQNPFEYLYRDSDVESMTDGHNNMTAYGYNDVFDEPAMGWARYAHTMR
IWVFNSGFFYIRPTIPSIELLDRVADRLGKEKAWDQAVFNEELFFPSHPGYYGLHASKRV
MDFYLFMNSKVLFKTVRKDANLKKLKPVVVHVNYHPDKFPRMLAIVEFYVNGKQDALDGF
PVGSDW
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014357
(426 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2016487 - symbol:RRA3 "reduced residual arabin... 1610 1.8e-165 1
TAIR|locus:2037248 - symbol:RRA2 "REDUCED RESIDUAL ARABIN... 1559 4.6e-160 1
TAIR|locus:2037273 - symbol:RRA1 "REDUCED RESIDUAL ARABIN... 1268 3.2e-129 1
TAIR|locus:2026831 - symbol:RAY1 "REDUCED ARABINOSE YARIV... 162 9.2e-09 1
TAIR|locus:2058769 - symbol:XEG113 "xyloglucanase 113" sp... 149 3.3e-07 1
TAIR|locus:2133457 - symbol:RGXT2 "rhamnogalacturonan xyl... 135 4.6e-06 1
TAIR|locus:2133392 - symbol:RGXT1 "rhamnogalacturonan xyl... 127 3.5e-05 1
TAIR|locus:2124968 - symbol:MGP4 "male gametophyte defect... 124 7.4e-05 1
>TAIR|locus:2016487 [details] [associations]
symbol:RRA3 "reduced residual arabinose 3" species:3702
"Arabidopsis thaliana" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0080147 "root hair cell development"
evidence=IMP] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009749 "response to glucose stimulus" evidence=RCA]
[GO:0009750 "response to fructose stimulus" evidence=RCA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] InterPro:IPR003388 GO:GO:0005783
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794 GO:GO:0005768
GO:GO:0016740 GO:GO:0005802 CAZy:GT77 InterPro:IPR005069
Pfam:PF03407 GO:GO:0080147 EMBL:AC025808 PANTHER:PTHR10994
ProtClustDB:CLSN2682481 EMBL:AY088117 EMBL:BT025990 EMBL:AK229032
IPI:IPI00530658 RefSeq:NP_564082.1 UniGene:At.28061
ProteinModelPortal:Q9LN62 STRING:Q9LN62 PaxDb:Q9LN62 PRIDE:Q9LN62
EnsemblPlants:AT1G19360.1 GeneID:838519 KEGG:ath:AT1G19360
TAIR:At1g19360 eggNOG:NOG318198 HOGENOM:HOG000012501
InParanoid:Q9LN62 OMA:EMLEMWF PhylomeDB:Q9LN62
Genevestigator:Q9LN62 Uniprot:Q9LN62
Length = 428
Score = 1610 (571.8 bits), Expect = 1.8e-165, P = 1.8e-165
Identities = 311/428 (72%), Positives = 354/428 (82%)
Query: 1 MAGRREKVQSIRGSRXXXXXXXXXXXXXXFAFLFPHGFFSSNLPIQ-DRQLVKKNVQAGS 59
MAGRR++ Q +RGSR A LFP+GFF+S+ ++ L K + Q GS
Sbjct: 1 MAGRRDRSQQLRGSRIAIAILIGIFIGCVCAVLFPYGFFNSSSSLKASEHLSKSSNQVGS 60
Query: 60 S-CESPERVNMLKSDIASLTEKNAELQKQVRQLTAKLRLAEQGKDQAQKQVMVLGEQHKV 118
S CESPERV MLKSD +L+EKNAEL+KQVR+LT KLRLAEQG D A+KQV+ LG Q K
Sbjct: 61 SACESPERVKMLKSDFVTLSEKNAELKKQVRELTEKLRLAEQGSDNARKQVLALGTQIKA 120
Query: 119 GPFGTVKALRTNPTVVPDESVNPRLAKILEEVAVGKELIVALANSNVKSMLEVWSTNIKR 178
GPFGTVK+LRTNPT++PDES+NPRLAKILEE+AV KE+IVALAN+NVK+MLEV +IKR
Sbjct: 121 GPFGTVKSLRTNPTILPDESINPRLAKILEEIAVDKEVIVALANANVKAMLEVQIASIKR 180
Query: 179 VGITNYLVVALDDQTAEYCKTNDIPVYQRDPDEGIDSIARKGGNHAVSGLKFRVLREFLQ 238
VGITNYLVVALDD CK ND+ Y+RDPD+ +D++ + GGNHAVSGLKFRVLREFLQ
Sbjct: 181 VGITNYLVVALDDYIENLCKENDVAYYKRDPDKDVDTVGKTGGNHAVSGLKFRVLREFLQ 240
Query: 239 LDYSVLLSDIDIVFLQNPFEYLYRDSDVESMTDGHNNMTAYGYNDVFDEPAMGWARYAHT 298
L Y VLLSD+DIVFLQNPF +LYRDSDVESM+DGH+N TAYG+NDVFDEPAMGWARYAHT
Sbjct: 241 LGYGVLLSDVDIVFLQNPFSHLYRDSDVESMSDGHDNHTAYGFNDVFDEPAMGWARYAHT 300
Query: 299 MRIWVFNSGFFYIRPTIPSIELLDRVADRLGKEKAWDQAVFNEELFFPSHPGYYGLHASK 358
MRIWVFNSGFFY+RPTIPSIELLDRVADRL K K WDQAVFNEELF+PSHP Y LHASK
Sbjct: 301 MRIWVFNSGFFYLRPTIPSIELLDRVADRLSKAKVWDQAVFNEELFYPSHPEYTALHASK 360
Query: 359 RVMDFYLFMNSKVLFKTVRKDANLKK-LKPVVVHVNYHPDKFPRMLAIVEFYVNGKQDAL 417
RVMD Y FMNSKVLFKTVRK+ LKK +KPV+VHVNYHPDK RM A+VEFYVNGKQDAL
Sbjct: 361 RVMDMYEFMNSKVLFKTVRKNHELKKKVKPVIVHVNYHPDKLNRMQAVVEFYVNGKQDAL 420
Query: 418 DGFPVGSD 425
D FP GS+
Sbjct: 421 DSFPDGSE 428
>TAIR|locus:2037248 [details] [associations]
symbol:RRA2 "REDUCED RESIDUAL ARABINOSE 2" species:3702
"Arabidopsis thaliana" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR003388 GO:GO:0005783 EMBL:CP002684
GO:GO:0016740 CAZy:GT77 InterPro:IPR005069 Pfam:PF03407
EMBL:AC013258 GO:GO:0080147 PANTHER:PTHR10994 EMBL:AY039531
EMBL:AY102148 IPI:IPI00527154 PIR:B96781 RefSeq:NP_565102.1
UniGene:At.17941 ProteinModelPortal:Q9C9Q5 IntAct:Q9C9Q5
PRIDE:Q9C9Q5 EnsemblPlants:AT1G75110.1 GeneID:843848
KEGG:ath:AT1G75110 TAIR:At1g75110 InParanoid:Q9C9Q5 OMA:SCESSER
PhylomeDB:Q9C9Q5 ProtClustDB:CLSN2682481 Genevestigator:Q9C9Q5
Uniprot:Q9C9Q5
Length = 428
Score = 1559 (553.9 bits), Expect = 4.6e-160, P = 4.6e-160
Identities = 296/428 (69%), Positives = 352/428 (82%)
Query: 1 MAGRREKVQSIRGSRXXXXXXXXXXXXXXFAFLFPHGFFSS--NLPIQDRQLVKKNVQAG 58
MAGRR+++Q +RGSR + LFP+GFF+S +L + ++ K G
Sbjct: 1 MAGRRDRIQQLRGSRIAIAIFVGILIGCVCSVLFPNGFFNSGSSLIANEERISKSTSTDG 60
Query: 59 -SSCESPERVNMLKSDIASLTEKNAELQKQVRQLTAKLRLAEQGKDQAQKQVMVLGEQHK 117
+SCES ERV MLKSD + ++ KNAEL+KQVR+LT K+RLAEQ + A+KQV+VLG + K
Sbjct: 61 LASCESSERVKMLKSDFSIISVKNAELRKQVRELTEKVRLAEQETENARKQVLVLGSEIK 120
Query: 118 VGPFGTVKALRTNPTVVPDESVNPRLAKILEEVAVGKELIVALANSNVKSMLEVWSTNIK 177
GPFGTVK+LRTNPTVVPDESVNPRLAK+LE+VAV KE+IV LANSNVK MLE+ ++K
Sbjct: 121 AGPFGTVKSLRTNPTVVPDESVNPRLAKLLEKVAVNKEIIVVLANSNVKPMLELQIASVK 180
Query: 178 RVGITNYLVVALDDQTAEYCKTNDIPVYQRDPDEGIDSIARKGGNHAVSGLKFRVLREFL 237
RVGI NYL+VALDD +C++ ++ Y+RDPD+ +D + + GGNHAVSGLKFRVLREFL
Sbjct: 181 RVGIQNYLIVALDDSMESFCESKEVVFYKRDPDKAVDMVGKSGGNHAVSGLKFRVLREFL 240
Query: 238 QLDYSVLLSDIDIVFLQNPFEYLYRDSDVESMTDGHNNMTAYGYNDVFDEPAMGWARYAH 297
QL YSVLLSD+DIVFLQNPF +L+RDSDVESM+DGH+N TAYG+NDVFDEP+MGWARYAH
Sbjct: 241 QLGYSVLLSDVDIVFLQNPFSHLHRDSDVESMSDGHDNNTAYGFNDVFDEPSMGWARYAH 300
Query: 298 TMRIWVFNSGFFYIRPTIPSIELLDRVADRLGKEKAWDQAVFNEELFFPSHPGYYGLHAS 357
TMRIWVFNSGFFY+RPTIPSI+LLDRVAD L K +AWDQAVFNE+LF+PSHPGY GLHAS
Sbjct: 301 TMRIWVFNSGFFYLRPTIPSIDLLDRVADTLSKSEAWDQAVFNEQLFYPSHPGYTGLHAS 360
Query: 358 KRVMDFYLFMNSKVLFKTVRKDANLKKLKPVVVHVNYHPDKFPRMLAIVEFYVNGKQDAL 417
KRVMD Y FMNSKVLFKTVRK+ LKKLKPV+VH+NYHPDK RM A+VEFYVNGKQDAL
Sbjct: 361 KRVMDMYEFMNSKVLFKTVRKNQELKKLKPVIVHLNYHPDKLERMHAVVEFYVNGKQDAL 420
Query: 418 DGFPVGSD 425
D FP GSD
Sbjct: 421 DSFPDGSD 428
>TAIR|locus:2037273 [details] [associations]
symbol:RRA1 "REDUCED RESIDUAL ARABINOSE 1" species:3702
"Arabidopsis thaliana" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR003388 GO:GO:0005783 EMBL:CP002684
GO:GO:0016740 CAZy:GT77 InterPro:IPR005069 Pfam:PF03407
EMBL:AC013258 GO:GO:0080147 PANTHER:PTHR10994
ProtClustDB:CLSN2682481 EMBL:BT026432 IPI:IPI00544136 PIR:C96781
RefSeq:NP_177648.1 UniGene:At.34814 ProteinModelPortal:Q9C9Q6
PRIDE:Q9C9Q6 EnsemblPlants:AT1G75120.1 GeneID:843849
KEGG:ath:AT1G75120 TAIR:At1g75120 InParanoid:Q9C9Q6 OMA:FAIISEK
PhylomeDB:Q9C9Q6 Genevestigator:Q9C9Q6 Uniprot:Q9C9Q6
Length = 402
Score = 1268 (451.4 bits), Expect = 3.2e-129, P = 3.2e-129
Identities = 247/368 (67%), Positives = 289/368 (78%)
Query: 57 AGSSCESPERVNMLKSDIASLTEKNAELQKQVRQLTAKLRLAEQGKDQAQKQVMVLGEQH 116
A +SCESPERV M K++ A ++EKN EL+KQV LT K+RLAEQ K+V+
Sbjct: 47 ASASCESPERVKMFKAEFAIISEKNGELRKQVSDLTEKVRLAEQ------KEVI------ 94
Query: 117 KVGPFGTVKALRTNPTVVPDESVNPRLAKILEEVAVGKELIVALANSNVKSMLEVWSTNI 176
K GPFGTV L+TNPTV PDES NPRLAK+LE+VAV KE+IV LAN+NVK MLEV ++
Sbjct: 95 KAGPFGTVTGLQTNPTVAPDESANPRLAKLLEKVAVNKEIIVVLANNNVKPMLEVQIASV 154
Query: 177 KRVGITNYLVVALDDQTAEYCKTNDIPVYQRDPDEGIDSIARKGGNHAVSGLKFRVLREF 236
KRVGI NYLVV LDD +CK+N++ Y+RDPD ID + + + VSGLKFRVLREF
Sbjct: 155 KRVGIQNYLVVPLDDSLESFCKSNEVAYYKRDPDNAIDVVGKSRRSSDVSGLKFRVLREF 214
Query: 237 LQLDYSVLLSDIDIVFLQNPFEYLYRDSDVESMTDGHNNMTAYGYNDVFDEPAMGWARYA 296
LQL Y VLLSD+DIVFLQNPF +LYRDSDVESM+DGH+N TAYG+NDVFD+P M +R
Sbjct: 215 LQLGYGVLLSDVDIVFLQNPFGHLYRDSDVESMSDGHDNNTAYGFNDVFDDPTMTRSRTV 274
Query: 297 HTMRIWVFNSGFFYIRPTIPSIELLDRVADRLGKEKAWDQAVFNEELFFPSHPGYYGLHA 356
+T RIWVFNSGFFY+RPT+PSIELLDRV D L K WDQAVFN+ LF+PSHPGY GL+A
Sbjct: 275 YTNRIWVFNSGFFYLRPTLPSIELLDRVTDTLSKSGGWDQAVFNQHLFYPSHPGYTGLYA 334
Query: 357 SKRVMDFYLFMNSKVLFKTVRKDANLKKLKPVVVHVNYHPDKFPRMLAIVEFYVNGKQDA 416
SKRVMD Y FMNS+VLFKTVRKD +KKLKPV++H+NYH DK RM A VEFYVNGKQDA
Sbjct: 335 SKRVMDVYEFMNSRVLFKTVRKDEEMKKLKPVIIHMNYHSDKLERMQAAVEFYVNGKQDA 394
Query: 417 LDGFPVGS 424
LD F GS
Sbjct: 395 LDRFRDGS 402
Score = 146 (56.5 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 39/100 (39%), Positives = 51/100 (51%)
Query: 1 MAGRREKVQSIRGSRXXXXXXXXXXXXXXFAFLFPHGFFSSNLPIQDRQLVKKNVQAGSS 60
MA R+EKVQ R L P+ F + + + A +S
Sbjct: 1 MAVRKEKVQPFRECGIAIAVLVGIFIGCVCTILIPNDFVN----------FRSSKVASAS 50
Query: 61 CESPERVNMLKSDIASLTEKNAELQKQVRQLTAKLRLAEQ 100
CESPERV M K++ A ++EKN EL+KQV LT K+RLAEQ
Sbjct: 51 CESPERVKMFKAEFAIISEKNGELRKQVSDLTEKVRLAEQ 90
>TAIR|locus:2026831 [details] [associations]
symbol:RAY1 "REDUCED ARABINOSE YARIV 1" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=IDA]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR003388
GO:GO:0005783 EMBL:CP002684 GO:GO:0016740 InterPro:IPR005069
Pfam:PF03407 PANTHER:PTHR10994 IPI:IPI00540709 RefSeq:NP_177220.2
UniGene:At.50024 ProteinModelPortal:F4I6V0
EnsemblPlants:AT1G70630.1 GeneID:843400 KEGG:ath:AT1G70630
OMA:CHFGTKC Uniprot:F4I6V0
Length = 537
Score = 162 (62.1 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 62/224 (27%), Positives = 108/224 (48%)
Query: 133 VVPDESVNPR-----LAKILEEVA-VGKELIVALANSNVKSMLEVWSTNIKRVGITNYLV 186
V DE+V P L +L VA + +++++A + K ML W ++R+ + N+LV
Sbjct: 246 VQKDETVPPLKFPFDLESLLPLVADKNRTVVLSVAGYSYKDMLMSWVCRLRRLKVPNFLV 305
Query: 187 VALDDQTAEYCKTNDIPVYQRDP--DEGID-SIARKGGN--HAVSGLKFRVLREFLQLDY 241
ALDD+T ++ +PV+ DP + I + G V+ +K R + + L+L Y
Sbjct: 306 CALDDETYQFSILQGLPVFF-DPYAPKNISFNDCHFGSKCFQRVTKVKSRTVLKILKLGY 364
Query: 242 SVLLSDIDIVFLQNPFEYL--YRDSDVESMTDGHNNMTAYGYNDVFDEPAMGWARYAHTM 299
+VLLSD+D+ + +NP L + S + + +D +N TA + P
Sbjct: 365 NVLLSDVDVYWFRNPLPLLQSFGPSVLAAQSDEYNT-TA-----PINRPR---------- 408
Query: 300 RIWVFNSGFFYIRPTIPSIELLDRVADRLGKEKAWDQAVFNEEL 343
R+ NSGF++ R P+I +++V +Q F + L
Sbjct: 409 RL---NSGFYFARSDSPTIAAMEKVVKHAATSGLSEQPSFYDTL 449
>TAIR|locus:2058769 [details] [associations]
symbol:XEG113 "xyloglucanase 113" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=IMP] [GO:0052325 "cell wall pectin biosynthetic process"
evidence=IMP] [GO:0052636 "arabinosyltransferase activity"
evidence=IMP] [GO:0080147 "root hair cell development"
evidence=IMP] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR003388
GO:GO:0005783 GO:GO:0005794 EMBL:CP002685 GO:GO:0005768
GO:GO:0006486 GO:GO:0005802 CAZy:GT77 InterPro:IPR005069
Pfam:PF03407 GO:GO:0080147 GO:GO:0052636 GO:GO:0052325
PANTHER:PTHR10994 EMBL:AY074327 IPI:IPI00544266 RefSeq:NP_850250.1
UniGene:At.75202 ProteinModelPortal:Q8VXZ5 SMR:Q8VXZ5 PRIDE:Q8VXZ5
EnsemblPlants:AT2G35610.1 GeneID:818128 KEGG:ath:AT2G35610
TAIR:At2g35610 InParanoid:Q8VXZ5 OMA:SIFCSGH PhylomeDB:Q8VXZ5
ProtClustDB:CLSN2680053 Genevestigator:Q8VXZ5 Uniprot:Q8VXZ5
Length = 644
Score = 149 (57.5 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 60/252 (23%), Positives = 105/252 (41%)
Query: 156 LIVALANSNVKSMLEVWSTNIKRVGITNYLVVALDDQTAEYCKTNDIPVYQRDPDEGIDS 215
+IV N + W ++ + ++N LV A+D + E +PV+ D + +
Sbjct: 134 IIVTFGNYAFMDFILTWVKHLTDLDLSNILVGAMDTKLLEALYWKGVPVF--DMGSHMST 191
Query: 216 IARKGGN---HAVSGLKFRVLREFLQLDYSVLLSDIDIVFLQNPFEYLYRDSDVESMTDG 272
+ G+ H + K ++ L Y +L+ D D+V+L+NP YL R D + +T
Sbjct: 192 VDVGWGSPTFHKMGREKVILIDSVLPFGYELLMCDTDMVWLKNPMPYLARFPDADVLTSS 251
Query: 273 HNNMTAYGYNDVFDEPAMGWARYAHTMRIWVFNSGFFYIRPTIPSIELLDRVAD-RLGKE 331
+ V D+ W + +N G F+ RPT + +L + L +
Sbjct: 252 DQVVPT-----VIDDSLDIWQQVGAA-----YNIGIFHWRPTESAKKLAKEWKEILLADD 301
Query: 332 KAWDQAVFNEEL---FFPSHPG----YYGLHASKRV--MDFYLFMNSKVLFKTVRKDANL 382
K WDQ FNE + PS G +Y + +V + +F + F V+
Sbjct: 302 KVWDQNGFNEIVRRQLGPSVEGDSGLFYAYDGNLKVGILPASIFCSGHTYF--VQAMYQQ 359
Query: 383 KKLKPVVVHVNY 394
+L+P VH +
Sbjct: 360 LRLEPYAVHTTF 371
>TAIR|locus:2133457 [details] [associations]
symbol:RGXT2 "rhamnogalacturonan xylosyltransferase 2"
species:3702 "Arabidopsis thaliana" [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0010306
"rhamnogalacturonan II biosynthetic process" evidence=IMP]
[GO:0035252 "UDP-xylosyltransferase activity" evidence=IDA]
InterPro:IPR003388 GO:GO:0005783 GO:GO:0005794 EMBL:CP002687
EMBL:AC007138 CAZy:GT77 InterPro:IPR005069 Pfam:PF03407
EMBL:AL161492 GO:GO:0035252 EMBL:AF104919 PANTHER:PTHR10994
GO:GO:0010306 KO:K11714 ProtClustDB:CLSN2682897 EMBL:AY065071
EMBL:BT002558 EMBL:BK005830 IPI:IPI00536959 PIR:T02000
RefSeq:NP_192084.1 UniGene:At.3842 ProteinModelPortal:Q9ZSJ0
IntAct:Q9ZSJ0 EnsemblPlants:AT4G01750.1 GeneID:827905
KEGG:ath:AT4G01750 TAIR:At4g01750 InParanoid:Q9ZSJ0 OMA:PDQNGET
PhylomeDB:Q9ZSJ0 Genevestigator:Q9ZSJ0 Uniprot:Q9ZSJ0
Length = 367
Score = 135 (52.6 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 70/268 (26%), Positives = 115/268 (42%)
Query: 140 NPRLAKILEEVAVGKELIVALANSNVKSMLEVWSTNIKRVGITNYLVVALDDQTAEYCKT 199
N LA+ + VA +IV +S L W ++ R ++V +D Y K
Sbjct: 85 NYTLAQAAKFVATNGTVIVCAVSSPFLPFLNNWLISVSRQKHQEKVLVIAEDYITLY-KV 143
Query: 200 NDI-PVYQRDPDEGIDS-IARKGGNHAVSGLKFRV---LREFLQLDYSVLLSDIDIVFLQ 254
N+ P + +DS A G+ R L + L+L Y+V+ +D+D+V+LQ
Sbjct: 144 NEKWPGHAVLIPPALDSKTAYSFGSQGFFNFTARRPQHLLQILELGYNVMYNDVDMVWLQ 203
Query: 255 NPFEYLYRDSDVESMTDGHNNMTAYGYNDVFDEPAMGWARYAHTMRIWVFNSGFFYIRPT 314
+PF+YL D TD + ++ P Y + I Y+RPT
Sbjct: 204 DPFQYLEGSHDAY-FTDDMPQIKPLNHSHDLPAPDQNGETYICSCMI--------YLRPT 254
Query: 315 IPSIELLDRVADRLGKEKAWDQAV-FNEELFFPSHPGY-YGLHASKRVMDFYLFMNSKVL 372
+ L+ + ++ L + +AW +++ F P + L+ + +D YL S+V
Sbjct: 255 NGAKLLMKKWSEEL-QSQAWSESIRFKAN----DQPAFNLALNKTAHQVDLYLL--SQVA 307
Query: 373 FKT---VRKDAN-LK--KLKPVVVHVNY 394
F T DA +K K K V+VH NY
Sbjct: 308 FPTGGLYFNDAAWVKETKGKHVIVHNNY 335
>TAIR|locus:2133392 [details] [associations]
symbol:RGXT1 "rhamnogalacturonan xylosyltransferase 1"
species:3702 "Arabidopsis thaliana" [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0010306
"rhamnogalacturonan II biosynthetic process" evidence=IMP]
[GO:0035252 "UDP-xylosyltransferase activity" evidence=IDA]
InterPro:IPR003388 GO:GO:0005783 GO:GO:0005794 EMBL:CP002687
EMBL:AC007138 CAZy:GT77 InterPro:IPR005069 Pfam:PF03407
EMBL:AL161492 GO:GO:0035252 EMBL:AF104919 PANTHER:PTHR10994
GO:GO:0010306 KO:K11714 ProtClustDB:CLSN2682897 EMBL:AY924810
EMBL:BK005829 IPI:IPI00542928 PIR:T01998 RefSeq:NP_192086.1
UniGene:At.50860 ProteinModelPortal:Q9ZSJ2 STRING:Q9ZSJ2
EnsemblPlants:AT4G01770.1 GeneID:828129 KEGG:ath:AT4G01770
TAIR:At4g01770 InParanoid:Q9ZSJ2 OMA:HSHDLPH PhylomeDB:Q9ZSJ2
Genevestigator:Q9ZSJ2 Uniprot:Q9ZSJ2
Length = 361
Score = 127 (49.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 67/265 (25%), Positives = 114/265 (43%)
Query: 143 LAKILEEVAVGKELIVALANSNVKSMLEVWSTNIKRVGITNYLVVALDDQTAEYCKTNDI 202
LA+ VA +IV +S L W ++ R + ++V +D Y K N+
Sbjct: 82 LAQAARFVAKNGTVIVCAVSSPFLPFLNNWLISVSRQKHQDKVLVIAEDYITLY-KVNEK 140
Query: 203 -PVYQRDPDEGIDS-IARKGGNHAVSGLKFRV---LREFLQLDYSVLLSDIDIVFLQNPF 257
P + +DS A G+ R L + L+L Y+V+ +D+D+V+LQ+PF
Sbjct: 141 WPGHAVLIPPALDSKTAFSFGSQGFFNFTARRPQHLLQILELGYNVMYNDVDMVWLQDPF 200
Query: 258 EYLYRDSDVESMTDGHNNMTAYGYNDVFDEPAMGWARYAHTMRIWVFNSGFFYIRPTIPS 317
YL D TD + ++ P Y + I Y+RPT +
Sbjct: 201 LYLEGSHDAY-FTDDMPQIKPLNHSHDLPHPDRNGETYICSCMI--------YLRPTNGA 251
Query: 318 IELLDRVADRLGKEKAWDQAV-FNEELFFPSHPGY-YGLHASKRVMDFYLFMNSKVLFKT 375
L+ + ++ L + +AW +++ F P + L+ + +D YL S+V F T
Sbjct: 252 KLLMKKWSEEL-QSQAWSESIRFKAN----DQPAFNLALNKTAHQVDLYLL--SQVAFPT 304
Query: 376 ----VRKDANLK--KLKPVVVHVNY 394
+ +A ++ K K V+VH NY
Sbjct: 305 GGLYFKNEAWVQETKGKHVIVHNNY 329
>TAIR|locus:2124968 [details] [associations]
symbol:MGP4 "male gametophyte defective 4" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0010306
"rhamnogalacturonan II biosynthetic process" evidence=IMP]
[GO:0042285 "xylosyltransferase activity" evidence=IDA] [GO:0048868
"pollen tube development" evidence=IMP] InterPro:IPR003388
GO:GO:0005783 GO:GO:0005794 EMBL:CP002687 CAZy:GT77
InterPro:IPR005069 Pfam:PF03407 EMBL:AL161491 GO:GO:0048868
GO:GO:0042285 PANTHER:PTHR10994 GO:GO:0010306 HOGENOM:HOG000241399
KO:K11714 ProtClustDB:CLSN2682897 EMBL:BT033130 IPI:IPI00537987
PIR:A85016 RefSeq:NP_849279.1 UniGene:At.20197
ProteinModelPortal:Q9M146 PRIDE:Q9M146 EnsemblPlants:AT4G01220.1
GeneID:828028 KEGG:ath:AT4G01220 TAIR:At4g01220 InParanoid:Q9M146
OMA:KPLDHSH PhylomeDB:Q9M146 Genevestigator:Q9M146 Uniprot:Q9M146
Length = 360
Score = 124 (48.7 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 68/264 (25%), Positives = 113/264 (42%)
Query: 143 LAKILEEVAVGKELIVALANSNVKSMLEVWSTNIKRVGITNYLVVALDDQTAEYCKTNDI 202
L + ++ VA +IV + L W ++ R + ++V +D Y K N+
Sbjct: 83 LPQAVKFVAKNGTVIVCAVSYPYLPFLNNWLISVSRQKHQDQVLVIAEDYATLY-KVNEK 141
Query: 203 -PVYQRDPDEGIDS-IARKGGNHAVSGLKFRV---LREFLQLDYSVLLSDIDIVFLQNPF 257
P + +DS A K G+ R L E L+L Y+V+ +D+D+V+LQ+PF
Sbjct: 142 WPGHAVLIPPALDSQTAHKFGSQGFFNFTARRPQHLLEILELGYNVMYNDVDMVWLQDPF 201
Query: 258 EYLYRDSDVESMTDGHNNMTAYGYND-VFDEPAMGWARYAHTMRIWVFNSGFFYIRPTIP 316
+YL D M D MTA D D P G R ++ S ++RPT
Sbjct: 202 QYLEGKHDAYFMDD----MTAIKPLDHSHDLPPPG-----KKGRTYIC-SCMIFLRPTNG 251
Query: 317 SIELLDRVADRLGKEKAWDQAVFNEELFFPSHPGY-YGLHASKRVMDFYL-----FMNSK 370
+ L+ + + L + + W +A + PG+ + L+ + +D YL F
Sbjct: 252 AKLLMKKWIEEL-ETQPWSRAKKAND-----QPGFNWALNKTANQVDMYLLSQAAFPTGG 305
Query: 371 VLFKTVRKDANLKKLKPVVVHVNY 394
+ FK + K K ++H NY
Sbjct: 306 LYFKN-KTWVKETKGKHAIIHNNY 328
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 426 412 0.00080 118 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 618 (66 KB)
Total size of DFA: 258 KB (2138 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.40u 0.09s 38.49t Elapsed: 00:00:02
Total cpu time: 38.40u 0.09s 38.49t Elapsed: 00:00:02
Start: Fri May 10 16:07:05 2013 End: Fri May 10 16:07:07 2013