BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014363
(426 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 134/304 (44%), Positives = 184/304 (60%), Gaps = 19/304 (6%)
Query: 70 SNLKEFTIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR---R 126
LK F++ EL+ A+ NFS ++G GGFG VYKG + + VAVK+L +
Sbjct: 23 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADG------TLVAVKRLKEERXQ 76
Query: 127 GGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS--PKS 184
GG ++ TEV + + H+NL++L G+C ER LLVY YM NGSV L P+S
Sbjct: 77 GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER----LLVYPYMANGSVASCLRERPES 132
Query: 185 ETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG 244
+ L W R +IA +ARGLAYLH+ D +II RD K++NILLDE++ A + DFGLA+L
Sbjct: 133 QPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 192
Query: 245 PSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSE 304
+ HV AV GT+G+ APEY+ TG+ + ++DV+ YGV L ELITG+R D R ++
Sbjct: 193 DYKD-XHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAND 251
Query: 305 QK--LLQWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
LL WVK L + K+ +VD L+G Y V +L VA LC + RPKMSEV
Sbjct: 252 DDVMLLDWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 310
Query: 363 LEMV 366
+ M+
Sbjct: 311 VRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 218 bits (556), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 132/304 (43%), Positives = 182/304 (59%), Gaps = 19/304 (6%)
Query: 70 SNLKEFTIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR---R 126
LK F++ EL+ A+ NF ++G GGFG VYKG + + VAVK+L +
Sbjct: 15 GQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADG------XLVAVKRLKEERTQ 68
Query: 127 GGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS--PKS 184
GG ++ TEV + + H+NL++L G+C ER LLVY YM NGSV L P+S
Sbjct: 69 GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER----LLVYPYMANGSVASCLRERPES 124
Query: 185 ETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG 244
+ L W R +IA +ARGLAYLH+ D +II RD K++NILLDE++ A + DFGLA+L
Sbjct: 125 QPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 184
Query: 245 PSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSE 304
+ HV AV G +G+ APEY+ TG+ + ++DV+ YGV L ELITG+R D R ++
Sbjct: 185 DYKD-XHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAND 243
Query: 305 QK--LLQWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
LL WVK L + K+ +VD L+G Y V +L VA LC + RPKMSEV
Sbjct: 244 DDVMLLDWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 302
Query: 363 LEMV 366
+ M+
Sbjct: 303 VRML 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 181 bits (458), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 162/289 (56%), Gaps = 14/289 (4%)
Query: 77 IAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEV 136
+ +L+ AT NF +IG G FG VYKG++++ KV + + G +E+ TE+
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDG----AKVALKRRTPESSQGIEEFETEI 86
Query: 137 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYL--SPKSETILTWAMRL 194
L H +LV L+G+C DER + +L+Y+YM NG++ ++L S ++W RL
Sbjct: 87 ETLSFCRHPHLVSLIGFC---DERN-EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 195 KIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVST 254
+I AARGL YLH II RD KS NILLDE + K++DFG+++ G G TH+
Sbjct: 143 EICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXX 199
Query: 255 AVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPY 314
V GT+GY PEY GRL +SDV+S+GV L+E++ R I ++ PR L +W
Sbjct: 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES 259
Query: 315 LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 363
++ Q QIVDP L K + K A CL ++ RP M +VL
Sbjct: 260 HNNG-QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 178 bits (451), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 161/289 (55%), Gaps = 14/289 (4%)
Query: 77 IAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEV 136
+ +L+ AT NF +IG G FG VYKG++++ KV + + G +E+ TE+
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDG----AKVALKRRTPESSQGIEEFETEI 86
Query: 137 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYL--SPKSETILTWAMRL 194
L H +LV L+G+C DER + +L+Y+YM NG++ ++L S ++W RL
Sbjct: 87 ETLSFCRHPHLVSLIGFC---DERN-EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 195 KIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVST 254
+I AARGL YLH II RD KS NILLDE + K++DFG+++ G TH+
Sbjct: 143 EICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXX 199
Query: 255 AVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPY 314
V GT+GY PEY GRL +SDV+S+GV L+E++ R I ++ PR L +W
Sbjct: 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVES 259
Query: 315 LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 363
++ Q QIVDP L K + K A CL ++ RP M +VL
Sbjct: 260 HNNG-QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 171 bits (433), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 111/313 (35%), Positives = 170/313 (54%), Gaps = 19/313 (6%)
Query: 64 SMSQRPSNLKEFTIAELKSATKNFSRSVV------IGEGGFGCVYKGLIKNSEDPSQKVE 117
S+ + F+ ELK+ T NF + +GEGGFG VYKG + N+ +K+
Sbjct: 4 SLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKL- 62
Query: 118 VAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVD 177
A+ + +++ E+ + +H+NLV+L+G+ +D D+ LVY YMPNGS+
Sbjct: 63 AAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDL----CLVYVYMPNGSLL 118
Query: 178 QYLSPKSETI-LTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLS 236
LS T L+W MR KIAQ AA G+ +LHE I RD KS+NILLDE + AK+S
Sbjct: 119 DRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKIS 175
Query: 237 DFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
DFGLAR T + + +VGT Y APE ++ G + +SD++S+GV L E+ITG +
Sbjct: 176 DFGLARASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAV 234
Query: 297 DRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTR 356
D + R Q LL + + K +D ++ S V + VA+ CL + R
Sbjct: 235 DEH--REPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVASQCLHEKKNKR 291
Query: 357 PKMSEVLEMVNKI 369
P + +V +++ ++
Sbjct: 292 PDIKKVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 171 bits (432), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 111/313 (35%), Positives = 169/313 (53%), Gaps = 19/313 (6%)
Query: 64 SMSQRPSNLKEFTIAELKSATKNFSRSVV------IGEGGFGCVYKGLIKNSEDPSQKVE 117
S+ + F+ ELK+ T NF + +GEGGFG VYKG + N+ +K+
Sbjct: 4 SLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKL- 62
Query: 118 VAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVD 177
A+ + +++ E+ + +H+NLV+L+G+ +D D+ LVY YMPNGS+
Sbjct: 63 AAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDL----CLVYVYMPNGSLL 118
Query: 178 QYLSPKSETI-LTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLS 236
LS T L+W MR KIAQ AA G+ +LHE I RD KS+NILLDE + AK+S
Sbjct: 119 DRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKIS 175
Query: 237 DFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
DFGLAR T + +VGT Y APE ++ G + +SD++S+GV L E+ITG +
Sbjct: 176 DFGLARASEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAV 234
Query: 297 DRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTR 356
D + R Q LL + + K +D ++ S V + VA+ CL + R
Sbjct: 235 DEH--REPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVASQCLHEKKNKR 291
Query: 357 PKMSEVLEMVNKI 369
P + +V +++ ++
Sbjct: 292 PDIKKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/304 (36%), Positives = 168/304 (55%), Gaps = 23/304 (7%)
Query: 75 FTIAELKSATKNFSRSVV------IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGG 128
F+ ELK+ T NF + +GEGGFG VYKG + N+ +K+ A+ +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKL-AAMVDITTEEL 67
Query: 129 HKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETI- 187
+++ E+ + +H+NLV+L+G+ +D D+ LVY YMPNGS+ LS T
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDL----CLVYVYMPNGSLLDRLSCLDGTPP 123
Query: 188 LTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 247
L+W MR KIAQ AA G+ +LHE I RD KS+NILLDE + AK+SDFGLAR SE
Sbjct: 124 LSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLAR--ASE 178
Query: 248 GFTH--VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQ 305
F + +VGT Y APE ++ G + +SD++S+GV L E+ITG +D + R Q
Sbjct: 179 KFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEH--REPQ 235
Query: 306 KLLQWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEM 365
LL + + K +D ++ S V + VA+ CL + RP + +V ++
Sbjct: 236 LLLDIKEEIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVASQCLHEKKNKRPDIKKVQQL 294
Query: 366 VNKI 369
+ ++
Sbjct: 295 LQEM 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 110/303 (36%), Positives = 163/303 (53%), Gaps = 23/303 (7%)
Query: 75 FTIAELKSATKNFSRSVV------IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGG 128
F+ ELK+ T NF + GEGGFG VYKG + N+ +K+ A+ +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKL-AAMVDITTEEL 64
Query: 129 HKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETI- 187
+++ E+ +H+NLV+L+G+ +D D+ LVY Y PNGS+ LS T
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDL----CLVYVYXPNGSLLDRLSCLDGTPP 120
Query: 188 LTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 247
L+W R KIAQ AA G+ +LHE I RD KS+NILLDE + AK+SDFGLAR SE
Sbjct: 121 LSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLAR--ASE 175
Query: 248 GFTH--VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQ 305
F + +VGT Y APE ++ G + +SD++S+GV L E+ITG +D + R Q
Sbjct: 176 KFAQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEH--REPQ 232
Query: 306 KLLQWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEM 365
LL + + K +D + S + + S VA+ CL + RP + +V ++
Sbjct: 233 LLLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYS-VASQCLHEKKNKRPDIKKVQQL 291
Query: 366 VNK 368
+ +
Sbjct: 292 LQE 294
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 121/234 (51%), Gaps = 28/234 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK---EWMTEVNFLGIVE 143
R V+G G FG VYKG I E + K+ VA+K L G K E+M E + ++
Sbjct: 40 LKRVKVLGSGAFGTVYKG-IWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 98
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
H +LV+L+G C IQ LV + MP+G + +Y+ S+ +L W +++
Sbjct: 99 HPHLVRLLGVCLSPT---IQ--LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI---- 149
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVG 258
A+G+ YL E +++ RD + N+L+ + K++DFGLARL EG A G
Sbjct: 150 --AKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARL--LEGDEKEYNADGG 202
Query: 259 TMG--YAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQ 309
M + A E + + +SDVWSYGV ++EL+T G +P D R LL+
Sbjct: 203 KMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE 256
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 121/234 (51%), Gaps = 28/234 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK---EWMTEVNFLGIVE 143
R V+G G FG VYKG I E + K+ VA+K L G K E+M E + ++
Sbjct: 17 LKRVKVLGSGAFGTVYKG-IWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 75
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
H +LV+L+G C IQ LV + MP+G + +Y+ S+ +L W +++
Sbjct: 76 HPHLVRLLGVCLSPT---IQ--LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI---- 126
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVG 258
A+G+ YL E +++ RD + N+L+ + K++DFGLARL EG A G
Sbjct: 127 --AKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARL--LEGDEKEYNADGG 179
Query: 259 TM--GYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQ 309
M + A E + + +SDVWSYGV ++EL+T G +P D R LL+
Sbjct: 180 KMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE 233
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 105/204 (51%), Gaps = 15/204 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFLGIVEHQNLVK 149
+GEG FG V + D + ++ VAVK L G + W E++ L + H++++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEM-VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
G C D E+ +Q LV EY+P GS+ YL S + A L AQ G+AYLH
Sbjct: 81 YKGCCEDQGEKSLQ--LVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHS 135
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVG--TMGYAAPEY 267
I R+ + N+LLD K+ DFGLA+ P EG + G + + APE
Sbjct: 136 Q---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP-EGHEYYRVREDGDSPVFWYAPEC 191
Query: 268 VQTGRLAARSDVWSYGVFLYELIT 291
++ + SDVWS+GV LYEL+T
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 105/204 (51%), Gaps = 15/204 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFLGIVEHQNLVK 149
+GEG FG V + D + ++ VAVK L G + W E++ L + H++++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEM-VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
G C D E+ +Q LV EY+P GS+ YL S + A L AQ G+AYLH
Sbjct: 81 YKGCCEDQGEKSLQ--LVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHA 135
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVG--TMGYAAPEY 267
I R+ + N+LLD K+ DFGLA+ P EG + G + + APE
Sbjct: 136 Q---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP-EGHEYYRVREDGDSPVFWYAPEC 191
Query: 268 VQTGRLAARSDVWSYGVFLYELIT 291
++ + SDVWS+GV LYEL+T
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 106/223 (47%), Gaps = 42/223 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSE--------DPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVE 143
+IG GGFG VY+ E DP + + ++ + + E +++
Sbjct: 14 IIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQ---------EAKLFAMLK 64
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK---SETILTWAMRLKIAQDA 200
H N++ L G C + LV E+ G +++ LS K + ++ WA+++
Sbjct: 65 HPNIIALRGVCLKEP----NLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI------ 114
Query: 201 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWN--------AKLSDFGLARLGPSEGFTHV 252
ARG+ YLH+ II RD KSSNIL+ ++ K++DFGLAR E
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRTT 170
Query: 253 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 295
+ G + APE ++ + SDVWSYGV L+EL+TG P
Sbjct: 171 KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 143/294 (48%), Gaps = 39/294 (13%)
Query: 88 SRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-----WMTEVNFLGIV 142
+R VIG G FG VYKG++K S ++V VA+K L + G+ E ++ E +G
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSG-KKEVPVAIKTL--KAGYTEKQRVDFLGEAGIMGQF 103
Query: 143 EHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAAR 202
H N+++L G + + +++ EYM NG++D++L K + + + + A
Sbjct: 104 SHHNIIRLEGVIS----KYKPMMIITEYMENGALDKFLREKDGEFSVLQL-VGMLRGIAA 158
Query: 203 GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAVVGT 259
G+ YL + + RD + NIL++ K+SDFGL+R+ P +T +
Sbjct: 159 GMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI--P 213
Query: 260 MGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSDA 318
+ + APE + + + SDVWS+G+ ++E++T G RP W LS+
Sbjct: 214 IRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP-------------YW---ELSNH 257
Query: 319 KQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDA 372
+ + I D + S + + C + RPK ++++ +++K++ A
Sbjct: 258 EVMKAIND-GFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 104/204 (50%), Gaps = 15/204 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK---EWMTEVNFLGIVEHQNLVK 149
+GEG FG V + D + ++ VAVK L G + W E+ L + H+++VK
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEM-VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 75
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
G C D E+ +Q LV EY+P GS+ YL P+ + A L AQ G+AYLH
Sbjct: 76 YKGCCEDQGEKSVQ--LVMEYVPLGSLRDYL-PRH--CVGLAQLLLFAQQICEGMAYLHA 130
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT--MGYAAPEY 267
I R + N+LLD K+ DFGLA+ P EG + G + + APE
Sbjct: 131 Q---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVP-EGHEYYRVREDGDSPVFWYAPEC 186
Query: 268 VQTGRLAARSDVWSYGVFLYELIT 291
++ + SDVWS+GV LYEL+T
Sbjct: 187 LKECKFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 104/204 (50%), Gaps = 15/204 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK---EWMTEVNFLGIVEHQNLVK 149
+GEG FG V + D + ++ VAVK L G + W E+ L + H+++VK
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEM-VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 74
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
G C D E+ +Q LV EY+P GS+ YL P+ + A L AQ G+AYLH
Sbjct: 75 YKGCCEDQGEKSVQ--LVMEYVPLGSLRDYL-PRH--CVGLAQLLLFAQQICEGMAYLHA 129
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT--MGYAAPEY 267
I R + N+LLD K+ DFGLA+ P EG + G + + APE
Sbjct: 130 Q---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVP-EGHEYYRVREDGDSPVFWYAPEC 185
Query: 268 VQTGRLAARSDVWSYGVFLYELIT 291
++ + SDVWS+GV LYEL+T
Sbjct: 186 LKECKFYYASDVWSFGVTLYELLT 209
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 114/214 (53%), Gaps = 24/214 (11%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR---GGHKEWMTEVNFLGIVEHQNLV 148
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 56 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 203
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 114 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 164
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFT-HVSTAVVGTMG 261
+ YL + + RD + N +LDE++ K++DFGLAR + E ++ H T +
Sbjct: 165 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 221
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 295
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 222 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 114/214 (53%), Gaps = 24/214 (11%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR---GGHKEWMTEVNFLGIVEHQNLV 148
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 55 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 203
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 113 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 163
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFT-HVSTAVVGTMG 261
+ YL + + RD + N +LDE++ K++DFGLAR + E ++ H T +
Sbjct: 164 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 220
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 295
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 221 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 112/214 (52%), Gaps = 24/214 (11%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR---GGHKEWMTEVNFLGIVEHQNLV 148
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 35 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 203
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 93 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 143
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGF--THVSTAVVGTMG 261
+ +L + + RD + N +LDE++ K++DFGLAR + F H T +
Sbjct: 144 MKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 200
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 295
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 114/214 (53%), Gaps = 24/214 (11%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR---GGHKEWMTEVNFLGIVEHQNLV 148
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 203
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 95 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 145
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFT-HVSTAVVGTMG 261
+ YL + + RD + N +LDE++ K++DFGLAR + E ++ H T +
Sbjct: 146 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 295
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 114/214 (53%), Gaps = 24/214 (11%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR---GGHKEWMTEVNFLGIVEHQNLV 148
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 29 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 203
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 87 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 137
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFT-HVSTAVVGTMG 261
+ YL + + RD + N +LDE++ K++DFGLAR + E ++ H T +
Sbjct: 138 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 194
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 295
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 195 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 114/214 (53%), Gaps = 24/214 (11%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR---GGHKEWMTEVNFLGIVEHQNLV 148
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 203
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 95 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 145
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFT-HVSTAVVGTMG 261
+ YL + + RD + N +LDE++ K++DFGLAR + E ++ H T +
Sbjct: 146 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 295
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 114/214 (53%), Gaps = 24/214 (11%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR---GGHKEWMTEVNFLGIVEHQNLV 148
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 36 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 203
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 94 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 144
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFT-HVSTAVVGTMG 261
+ YL + + RD + N +LDE++ K++DFGLAR + E ++ H T +
Sbjct: 145 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 201
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 295
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 112/214 (52%), Gaps = 24/214 (11%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR---GGHKEWMTEVNFLGIVEHQNLV 148
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 38 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 203
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 96 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 146
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGF--THVSTAVVGTMG 261
+ +L + + RD + N +LDE++ K++DFGLAR + F H T +
Sbjct: 147 MKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVK 203
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 295
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 114/214 (53%), Gaps = 24/214 (11%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR---GGHKEWMTEVNFLGIVEHQNLV 148
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 35 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 203
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 93 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 143
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFT-HVSTAVVGTMG 261
+ YL + + RD + N +LDE++ K++DFGLAR + E ++ H T +
Sbjct: 144 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 200
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 295
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 114/214 (53%), Gaps = 24/214 (11%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR---GGHKEWMTEVNFLGIVEHQNLV 148
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 32 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 203
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 90 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 140
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFT-HVSTAVVGTMG 261
+ YL + + RD + N +LDE++ K++DFGLAR + E ++ H T +
Sbjct: 141 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 197
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 295
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 198 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 114/214 (53%), Gaps = 24/214 (11%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR---GGHKEWMTEVNFLGIVEHQNLV 148
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 34 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 203
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 92 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 142
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFT-HVSTAVVGTMG 261
+ YL + + RD + N +LDE++ K++DFGLAR + E ++ H T +
Sbjct: 143 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 199
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 295
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 200 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 112/214 (52%), Gaps = 24/214 (11%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR---GGHKEWMTEVNFLGIVEHQNLV 148
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 38 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 203
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 96 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 146
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGF--THVSTAVVGTMG 261
+ +L + + RD + N +LDE++ K++DFGLAR + F H T +
Sbjct: 147 MKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 203
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 295
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 130/283 (45%), Gaps = 36/283 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE--WMTEVNFLGIVEHQNLVKL 150
IG G FG V+ G N K +VA+K + R G E ++ E + + H LV+L
Sbjct: 15 IGSGQFGLVHLGYWLN------KDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQL 67
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
G C + LV+E+M +G + YL + + L + D G+AYL E
Sbjct: 68 YGVCLEQ----APICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 270
+I RD + N L+ E K+SDFG+ R + +T ST + +A+PE
Sbjct: 123 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSF 178
Query: 271 GRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRL 329
R +++SDVWS+GV ++E+ + G+ P + NR SE + D ++ PRL
Sbjct: 179 SRYSSKSDVWSFGVLMWEVFSEGKIPYE-NRSNSE---------VVEDISTGFRLYKPRL 228
Query: 330 EGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDA 372
+ + + N C + RP S +L + +I ++
Sbjct: 229 ASTH-------VYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 112/214 (52%), Gaps = 24/214 (11%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR---GGHKEWMTEVNFLGIVEHQNLV 148
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 42 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 203
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 100 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 150
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGF--THVSTAVVGTMG 261
+ +L + + RD + N +LDE++ K++DFGLAR + F H T +
Sbjct: 151 MKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 207
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 295
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 208 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 112/214 (52%), Gaps = 24/214 (11%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR---GGHKEWMTEVNFLGIVEHQNLV 148
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 203
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 95 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 145
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGF--THVSTAVVGTMG 261
+ +L + + RD + N +LDE++ K++DFGLAR + F H T +
Sbjct: 146 MKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 295
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 112/214 (52%), Gaps = 24/214 (11%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR---GGHKEWMTEVNFLGIVEHQNLV 148
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 96 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 203
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 154 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 204
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGF--THVSTAVVGTMG 261
+ +L + + RD + N +LDE++ K++DFGLAR + F H T +
Sbjct: 205 MKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 261
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 295
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 262 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 112/214 (52%), Gaps = 24/214 (11%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR---GGHKEWMTEVNFLGIVEHQNLV 148
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 37 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 203
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 95 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 145
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGF--THVSTAVVGTMG 261
+ +L + + RD + N +LDE++ K++DFGLAR + F H T +
Sbjct: 146 MKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 295
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 130/283 (45%), Gaps = 36/283 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE--WMTEVNFLGIVEHQNLVKL 150
IG G FG V+ G N K +VA+K + R G E ++ E + + H LV+L
Sbjct: 13 IGSGQFGLVHLGYWLN------KDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQL 65
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
G C + LV+E+M +G + YL + + L + D G+AYL E
Sbjct: 66 YGVCLEQ----APICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA 120
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 270
+I RD + N L+ E K+SDFG+ R + +T ST + +A+PE
Sbjct: 121 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSF 176
Query: 271 GRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRL 329
R +++SDVWS+GV ++E+ + G+ P + NR SE + D ++ PRL
Sbjct: 177 SRYSSKSDVWSFGVLMWEVFSEGKIPYE-NRSNSE---------VVEDISTGFRLYKPRL 226
Query: 330 EGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDA 372
+ + + N C + RP S +L + +I ++
Sbjct: 227 ASTH-------VYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 110/214 (51%), Gaps = 24/214 (11%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR---GGHKEWMTEVNFLGIVEHQNLV 148
VIG G FGCVY G + +++ +K+ AVK L R G +++TE + H N++
Sbjct: 36 VIGRGHFGCVYHGTLLDND--GKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 203
L+G C + L+V YM +G + ++ +P + ++ + +++ A+G
Sbjct: 94 SLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV------AKG 144
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR--LGPSEGFTHVSTAVVGTMG 261
+ YL + + RD + N +LDE++ K++DFGLAR H T +
Sbjct: 145 MKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVK 201
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 295
+ A E +QT + +SDVWS+GV L+EL+T P
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 130/283 (45%), Gaps = 36/283 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE--WMTEVNFLGIVEHQNLVKL 150
IG G FG V+ G N K +VA+K + R G E ++ E + + H LV+L
Sbjct: 18 IGSGQFGLVHLGYWLN------KDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQL 70
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
G C + LV+E+M +G + YL + + L + D G+AYL E
Sbjct: 71 YGVCLEQ----APICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA 125
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 270
+I RD + N L+ E K+SDFG+ R + +T ST + +A+PE
Sbjct: 126 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSF 181
Query: 271 GRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRL 329
R +++SDVWS+GV ++E+ + G+ P + NR SE + D ++ PRL
Sbjct: 182 SRYSSKSDVWSFGVLMWEVFSEGKIPYE-NRSNSE---------VVEDISTGFRLYKPRL 231
Query: 330 EGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDA 372
+ + + N C + RP S +L + +I ++
Sbjct: 232 ASTH-------VYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 102/204 (50%), Gaps = 15/204 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFLGIVEHQNLVK 149
+GEG FG V + D + ++ VAVK L G + W E++ L + H++++K
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEM-VAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIK 97
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
G C D +Q LV EY+P GS+ YL S + A L AQ G+AYLH
Sbjct: 98 YKGCCEDAGAASLQ--LVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHA 152
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVG--TMGYAAPEY 267
I RD + N+LLD K+ DFGLA+ P EG G + + APE
Sbjct: 153 Q---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP-EGHEXYRVREDGDSPVFWYAPEC 208
Query: 268 VQTGRLAARSDVWSYGVFLYELIT 291
++ + SDVWS+GV LYEL+T
Sbjct: 209 LKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 127/280 (45%), Gaps = 36/280 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE--WMTEVNFLGIVEHQNLVKL 150
IG G FG V+ G N K +VA+K + R G E ++ E + + H LV+L
Sbjct: 15 IGSGQFGLVHLGYWLN------KDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQL 67
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
G C + LV+E+M +G + YL + + L + D G+AYL E
Sbjct: 68 YGVCLEQ----APICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 270
+I RD + N L+ E K+SDFG+ R + +T ST + +A+PE
Sbjct: 123 ---SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSF 178
Query: 271 GRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRL 329
R +++SDVWS+GV ++E+ + G+ P + NR SE + D ++ PRL
Sbjct: 179 SRYSSKSDVWSFGVLMWEVFSEGKIPYE-NRSNSE---------VVEDISTGFRLYKPRL 228
Query: 330 EGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKI 369
+ + + N C + RP S +L + I
Sbjct: 229 ASTH-------VYQIMNHCWKERPEDRPAFSRLLRQLAAI 261
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 105/219 (47%), Gaps = 25/219 (11%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL--GRRGGHKEWMTEVNFLGIVEHQNLVKL 150
+GEG FG V+ N K+ VAVK L K++ E L ++H+++VK
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYL-------------SPKSETILTWAMRLKIA 197
G C + D ++V+EYM +G ++++L +P +E LT + L IA
Sbjct: 81 YGVCVEGDPL----IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTE--LTQSQMLHIA 134
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q A G+ YL + RD + N L+ E K+ DFG++R S + V +
Sbjct: 135 QQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTM 191
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
+ + PE + + SDVWS GV L+E+ T G++P
Sbjct: 192 LPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVKLV 151
+G G FG V+ G +VAVK L + + ++ E N + ++HQ LV+L
Sbjct: 27 LGAGQFGEVWMGYYNG------HTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 80
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
+ ++ EYM NGS+ +L S LT L +A A G+A++ E
Sbjct: 81 AVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER- 134
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD +++NIL+ + + K++DFGLARL +T A + + APE + G
Sbjct: 135 --NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYG 191
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+SDVWS+G+ L E++T GR P
Sbjct: 192 TFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVKLV 151
+G G FG V+ G +VAVK L + + ++ E N + ++HQ LV+L
Sbjct: 26 LGAGQFGEVWMGYYNG------HTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 79
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
+ ++ EYM NGS+ +L S LT L +A A G+A++ E
Sbjct: 80 AVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER- 133
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD +++NIL+ + + K++DFGLARL +T A + + APE + G
Sbjct: 134 --NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYG 190
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+SDVWS+G+ L E++T GR P
Sbjct: 191 TFTIKSDVWSFGILLTEIVTHGRIP 215
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 129/283 (45%), Gaps = 36/283 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE--WMTEVNFLGIVEHQNLVKL 150
IG G FG V+ G N K +VA+K + R G E ++ E + + H LV+L
Sbjct: 16 IGSGQFGLVHLGYWLN------KDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQL 68
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
G C + LV E+M +G + YL + + L + D G+AYL E
Sbjct: 69 YGVCLEQ----APICLVTEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA 123
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 270
+I RD + N L+ E K+SDFG+ R + +T ST + +A+PE
Sbjct: 124 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSF 179
Query: 271 GRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRL 329
R +++SDVWS+GV ++E+ + G+ P + NR SE + D ++ PRL
Sbjct: 180 SRYSSKSDVWSFGVLMWEVFSEGKIPYE-NRSNSE---------VVEDISTGFRLYKPRL 229
Query: 330 EGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDA 372
+ + + N C + RP S +L + +I ++
Sbjct: 230 ASTH-------VYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 130/283 (45%), Gaps = 36/283 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE--WMTEVNFLGIVEHQNLVKL 150
IG G FG V+ G N K +VA+K + + G E ++ E + + H LV+L
Sbjct: 35 IGSGQFGLVHLGYWLN------KDKVAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQL 87
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
G C + LV+E+M +G + YL + + L + D G+AYL E
Sbjct: 88 YGVCLEQ----APICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA 142
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 270
+I RD + N L+ E K+SDFG+ R + +T ST + +A+PE
Sbjct: 143 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSF 198
Query: 271 GRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRL 329
R +++SDVWS+GV ++E+ + G+ P + NR SE + D ++ PRL
Sbjct: 199 SRYSSKSDVWSFGVLMWEVFSEGKIPYE-NRSNSE---------VVEDISTGFRLYKPRL 248
Query: 330 EGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDA 372
+ + + N C + RP S +L + +I ++
Sbjct: 249 ASTH-------VYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 284
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVKLV 151
+G G FG V+ G +VAVK L + + ++ E N + ++HQ LV+L
Sbjct: 31 LGAGQFGEVWMGYYNG------HTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 84
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
+ ++ EYM NGS+ +L S LT L +A A G+A++ E
Sbjct: 85 AVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER- 138
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD +++NIL+ + + K++DFGLARL +T A + + APE + G
Sbjct: 139 --NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYG 195
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+SDVWS+G+ L E++T GR P
Sbjct: 196 TFTIKSDVWSFGILLTEIVTHGRIP 220
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVKLV 151
+G G FG V+ G +VAVK L + + ++ E N + ++HQ LV+L
Sbjct: 16 LGAGQFGEVWMGYYNG------HTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 69
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
+ ++ EYM NGS+ +L S LT L +A A G+A++ E
Sbjct: 70 AVVTQE-----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER- 123
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD +++NIL+ + + K++DFGLARL +T A + + APE + G
Sbjct: 124 --NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYG 180
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+SDVWS+G+ L E++T GR P
Sbjct: 181 TFTIKSDVWSFGILLTEIVTHGRIP 205
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVKLV 151
+G G FG V+ G +VAVK L + + ++ E N + ++HQ LV+L
Sbjct: 21 LGAGQFGEVWMGYYNG------HTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
+ ++ EYM NGS+ +L S LT L +A A G+A++ E
Sbjct: 75 AVVTQE-----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER- 128
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD +++NIL+ + + K++DFGLARL +T A + + APE + G
Sbjct: 129 --NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYG 185
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+SDVWS+G+ L E++T GR P
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 105/208 (50%), Gaps = 19/208 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KEWMTEVNFLGIVEHQNLV 148
IG G FG V++ S+ VAVK L + H E++ EV + + H N+V
Sbjct: 45 IGAGSFGTVHRAEWHGSD-------VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-SETILTWAMRLKIAQDAARGLAYL 207
+G I V EY+ GS+ + L + L RL +A D A+G+ YL
Sbjct: 98 LFMGAVTQPPNLSI----VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL 153
Query: 208 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEY 267
H + I+ RD KS N+L+D+++ K+ DFGL+RL S S GT + APE
Sbjct: 154 H-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLX--SKXAAGTPEWMAPEV 210
Query: 268 VQTGRLAARSDVWSYGVFLYELITGRRP 295
++ +SDV+S+GV L+EL T ++P
Sbjct: 211 LRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 140/295 (47%), Gaps = 42/295 (14%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGGHKE-----WMTEVNFL 139
N S V+G G FG V G +K PS+K + VA+K L + G+ E ++ E + +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKL---PSKKEISVAIKTL--KVGYTEKQRRDFLGEASIM 100
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
G +H N+++L G + ++V EYM NGS+D +L K + T + + +
Sbjct: 101 GQFDHPNIIRLEGVVT----KSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRG 155
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAV 256
A G+ YL D + RD + NIL++ K+SDFGLAR+ P +T +
Sbjct: 156 IASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKI 212
Query: 257 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYL 315
+ + +PE + + + SDVWSYG+ L+E+++ G RP S Q ++
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY---WEMSNQDVI------- 260
Query: 316 SDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 370
+ VD + + L + C K+ RPK +++ +++K++
Sbjct: 261 -------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 122/242 (50%), Gaps = 30/242 (12%)
Query: 72 LKEFTIAELKSATKNFSRSV---------VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
+ FT + A + F++ + VIG G FG V G +K +++ VA+K
Sbjct: 11 IDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPG--KREIFVAIKT 68
Query: 123 LGRRGGHKE-----WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVD 177
L + G+ E +++E + +G +H N++ L G + +++ E+M NGS+D
Sbjct: 69 L--KSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVT----KSTPVMIITEFMENGSLD 122
Query: 178 QYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSD 237
+L +++ T + + + A G+ YL D + RD + NIL++ K+SD
Sbjct: 123 SFLR-QNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSD 178
Query: 238 FGLARLGPSEGFTHVSTAVVG---TMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GR 293
FGL+R + T+ +G + + APE +Q + + SDVWSYG+ ++E+++ G
Sbjct: 179 FGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE 238
Query: 294 RP 295
RP
Sbjct: 239 RP 240
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 107/208 (51%), Gaps = 19/208 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KEWMTEVNFLGIVEHQNLV 148
IG G FG V++ S+ VAVK L + H E++ EV + + H N+V
Sbjct: 45 IGAGSFGTVHRAEWHGSD-------VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-SETILTWAMRLKIAQDAARGLAYL 207
+G I V EY+ GS+ + L + L RL +A D A+G+ YL
Sbjct: 98 LFMGAVTQPPNLSI----VTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL 153
Query: 208 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEY 267
H + I+ R+ KS N+L+D+++ K+ DFGL+RL S + S A GT + APE
Sbjct: 154 H-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA--GTPEWMAPEV 210
Query: 268 VQTGRLAARSDVWSYGVFLYELITGRRP 295
++ +SDV+S+GV L+EL T ++P
Sbjct: 211 LRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 140/295 (47%), Gaps = 42/295 (14%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGGHKE-----WMTEVNFL 139
N S V+G G FG V G +K PS+K + VA+K L + G+ E ++ E + +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKL---PSKKEISVAIKTL--KVGYTEKQRRDFLGEASIM 100
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
G +H N+++L G + ++V EYM NGS+D +L K + T + + +
Sbjct: 101 GQFDHPNIIRLEGVVT----KSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRG 155
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAV 256
A G+ YL D + RD + NIL++ K+SDFGL+R+ P +T +
Sbjct: 156 IASGMKYLS---DMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 257 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYL 315
+ + +PE + + + SDVWSYG+ L+E+++ G RP S Q ++
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY---WEMSNQDVI------- 260
Query: 316 SDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 370
+ VD + + L + C K+ RPK +++ +++K++
Sbjct: 261 -------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 140/295 (47%), Gaps = 42/295 (14%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGGHKE-----WMTEVNFL 139
N S V+G G FG V G +K PS+K + VA+K L + G+ E ++ E + +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKL---PSKKEISVAIKTL--KVGYTEKQRRDFLGEASIM 100
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
G +H N+++L G + ++V EYM NGS+D +L K + T + + +
Sbjct: 101 GQFDHPNIIRLEGVVT----KSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRG 155
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAV 256
A G+ YL D + RD + NIL++ K+SDFGL+R+ P +T +
Sbjct: 156 IASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 257 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYL 315
+ + +PE + + + SDVWSYG+ L+E+++ G RP S Q ++
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY---WEMSNQDVI------- 260
Query: 316 SDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 370
+ VD + + L + C K+ RPK +++ +++K++
Sbjct: 261 -------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 145/295 (49%), Gaps = 42/295 (14%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGGHKE-----WMTEVNFL 139
N S V+G G FG V G +K PS+K + VA+K L + G+ E ++ E + +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKL---PSKKEISVAIKTL--KVGYTEKQRRDFLGEASIM 100
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
G +H N+++L G + ++V EYM NGS+D +L K + T + + +
Sbjct: 101 GQFDHPNIIRLEGVVT----KSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRG 155
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAV 256
A G+ YL D + RD + NIL++ K+SDFGL+R+ P +T +
Sbjct: 156 IASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 257 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYL 315
+ + +PE + + + SDVWSYG+ L+E+++ G RP S Q +++ V
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY---WEMSNQDVIKAVD--- 264
Query: 316 SDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 370
+ +R + P ++ + L + C K+ RPK +++ +++K++
Sbjct: 265 ---EGYR--LPPPMDCP------AALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVKLV 151
+G G FG V+ G +VAVK L + + ++ E N + ++HQ LV+L
Sbjct: 27 LGAGQFGEVWMGYYNGH------TKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 80
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
+ ++ EYM NGS+ +L S LT L +A A G+A++ E
Sbjct: 81 AVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER- 134
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD +++NIL+ + + K++DFGLARL T A + + APE + G
Sbjct: 135 --NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYG 191
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+SDVWS+G+ L E++T GR P
Sbjct: 192 TFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 143/299 (47%), Gaps = 50/299 (16%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGGHKE-----WMTEVNFL 139
N S V+G G FG V G +K PS+K + VA+K L + G+ E ++ E + +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKL---PSKKEISVAIKTL--KVGYTEKQRRDFLGEASIM 100
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
G +H N+++L G + ++V EYM NGS+D +L K + T + + +
Sbjct: 101 GQFDHPNIIRLEGVVT----KSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRG 155
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAV 256
A G+ YL D + RD + NIL++ K+SDFGL+R+ P +T +
Sbjct: 156 IASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 257 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPI----DRNRPRSEQKLLQWV 311
+ + +PE + + + SDVWSYG+ L+E+++ G RP +++ ++ + +
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 270
Query: 312 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 370
P A ++ ++D C K+ RPK +++ +++K++
Sbjct: 271 PPMDCPAALYQLMLD---------------------CWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 143/299 (47%), Gaps = 50/299 (16%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGGHKE-----WMTEVNFL 139
N S V+G G FG V G +K PS+K + VA+K L + G+ E ++ E + +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKL---PSKKEISVAIKTL--KVGYTEKQRRDFLGEASIM 100
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
G +H N+++L G + ++V EYM NGS+D +L K + T + + +
Sbjct: 101 GQFDHPNIIRLEGVVT----KSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRG 155
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAV 256
A G+ YL D + RD + NIL++ K+SDFGL+R+ P +T +
Sbjct: 156 IASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 257 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPI----DRNRPRSEQKLLQWV 311
+ + +PE + + + SDVWSYG+ L+E+++ G RP +++ ++ + +
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 270
Query: 312 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 370
P A ++ ++D C K+ RPK +++ +++K++
Sbjct: 271 PPMDCPAALYQLMLD---------------------CWQKDRNNRPKFEQIVSILDKLI 308
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 105/207 (50%), Gaps = 19/207 (9%)
Query: 93 IGEGGFG----CVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK---EWMTEVNFLGIVEHQ 145
+GEG FG C Y + E + +VAVK L G + E+ L + H+
Sbjct: 29 LGEGHFGKVELCRY-----DPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 83
Query: 146 NLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLA 205
N+VK G C +D GI+ L+ E++P+GS+ +YL PK++ + +LK A +G+
Sbjct: 84 NIVKYKGICTEDGGNGIK--LIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMD 140
Query: 206 YLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAA 264
YL Q + RD + N+L++ + K+ DFGL + + + V + + A
Sbjct: 141 YLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA 197
Query: 265 PEYVQTGRLAARSDVWSYGVFLYELIT 291
PE + + SDVWS+GV L+EL+T
Sbjct: 198 PECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVKLV 151
+G G FG V+ G +VAVK L + + ++ E N + ++HQ LV+L
Sbjct: 30 LGAGQFGEVWMGYYNG------HTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 83
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
+ ++ EYM NGS+ +L S LT L +A A G+A++ E
Sbjct: 84 AVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER- 137
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD +++NIL+ + + K++DFGLARL T A + + APE + G
Sbjct: 138 --NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYG 194
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+SDVWS+G+ L E++T GR P
Sbjct: 195 TFTIKSDVWSFGILLTEIVTHGRIP 219
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVKLV 151
+G G FG V+ G +VAVK L + + ++ E N + ++HQ LV+L
Sbjct: 29 LGAGQFGEVWMGYYNG------HTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 82
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
+ ++ EYM NGS+ +L S LT L +A A G+A++ E
Sbjct: 83 AVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER- 136
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD +++NIL+ + + K++DFGLARL T A + + APE + G
Sbjct: 137 --NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYG 193
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+SDVWS+G+ L E++T GR P
Sbjct: 194 TFTIKSDVWSFGILLTEIVTHGRIP 218
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 145/295 (49%), Gaps = 42/295 (14%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGGHKE-----WMTEVNFL 139
N S V+G G FG V G +K PS+K + VA+K L + G+ E ++ E + +
Sbjct: 44 NISIDKVVGAGEFGEVCSGRLKL---PSKKEISVAIKTL--KVGYTEKQRRDFLGEASIM 98
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
G +H N+++L G + ++V EYM NGS+D +L K + T + + +
Sbjct: 99 GQFDHPNIIRLEGVVT----KSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRG 153
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAV 256
A G+ YL D + RD + NIL++ K+SDFGL+R+ P +T +
Sbjct: 154 IASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 210
Query: 257 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYL 315
+ + +PE + + + SDVWSYG+ L+E+++ G RP S Q +++ V
Sbjct: 211 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY---WEMSNQDVIKAVD--- 262
Query: 316 SDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 370
+ +R + P ++ + L + C K+ RPK +++ +++K++
Sbjct: 263 ---EGYR--LPPPMDCP------AALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 306
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVKLV 151
+G G FG V+ G +VAVK L + + ++ E N + ++HQ LV+L
Sbjct: 23 LGAGQFGEVWMGYYNG------HTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 76
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
+ ++ EYM NGS+ +L S LT L +A A G+A++ E
Sbjct: 77 AVVTQE-----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER- 130
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD +++NIL+ + + K++DFGLARL T A + + APE + G
Sbjct: 131 --NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYG 187
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+SDVWS+G+ L E++T GR P
Sbjct: 188 TFTIKSDVWSFGILLTEIVTHGRIP 212
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 145/295 (49%), Gaps = 42/295 (14%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGGHKE-----WMTEVNFL 139
N S V+G G FG V G +K PS+K + VA+K L + G+ E ++ E + +
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKL---PSKKEISVAIKTL--KVGYTEKQRRDFLGEASIM 71
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
G +H N+++L G + ++V EYM NGS+D +L K + T + + +
Sbjct: 72 GQFDHPNIIRLEGVVT----KSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRG 126
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAV 256
A G+ YL D + RD + NIL++ K+SDFGL+R+ P +T +
Sbjct: 127 IASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 183
Query: 257 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYL 315
+ + +PE + + + SDVWSYG+ L+E+++ G RP S Q +++ V
Sbjct: 184 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY---WEMSNQDVIKAVD--- 235
Query: 316 SDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 370
+ +R + P ++ + L + C K+ RPK +++ +++K++
Sbjct: 236 ---EGYR--LPPPMDCP------AALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 279
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVKLV 151
+G G FG V+ G +VAVK L + + ++ E N + ++HQ LV+L
Sbjct: 22 LGAGQFGEVWMGYYNG------HTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 75
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
+ ++ EYM NGS+ +L S LT L +A A G+A++ E
Sbjct: 76 AVVTQE-----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER- 129
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD +++NIL+ + + K++DFGLARL T A + + APE + G
Sbjct: 130 --NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYG 186
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+SDVWS+G+ L E++T GR P
Sbjct: 187 TFTIKSDVWSFGILLTEIVTHGRIP 211
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVKLV 151
+G G FG V+ G +VAVK L + + ++ E N + ++HQ LV+L
Sbjct: 21 LGAGQFGEVWMGYYNG------HTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
+ ++ EYM NGS+ +L S LT L +A A G+A++ E
Sbjct: 75 AVVTQE-----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER- 128
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD +++NIL+ + + K++DFGLARL T A + + APE + G
Sbjct: 129 --NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYG 185
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+SDVWS+G+ L E++T GR P
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVKLV 151
+G G FG V+ G +VAVK L + + ++ E N + ++HQ LV+L
Sbjct: 17 LGAGQFGEVWMGYYNG------HTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 70
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
+ ++ EYM NGS+ +L S LT L +A A G+A++ E
Sbjct: 71 AVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER- 124
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I R+ +++NIL+ + + K++DFGLARL +T A + + APE + G
Sbjct: 125 --NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKF-PIKWTAPEAINYG 181
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+SDVWS+G+ L E++T GR P
Sbjct: 182 TFTIKSDVWSFGILLTEIVTHGRIP 206
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVKLV 151
+G G FG V+ G +VAVK L + + ++ E N + ++HQ LV+L
Sbjct: 21 LGAGQFGEVWMGYYNG------HTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
+ ++ EYM NGS+ +L S LT L +A A G+A++ E
Sbjct: 75 AVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER- 128
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD +++NIL+ + + K++DFGLARL T A + + APE + G
Sbjct: 129 --NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKF-PIKWTAPEAINYG 185
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+SDVWS+G+ L E++T GR P
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 105/207 (50%), Gaps = 19/207 (9%)
Query: 93 IGEGGFG----CVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK---EWMTEVNFLGIVEHQ 145
+GEG FG C Y + E + +VAVK L G + E+ L + H+
Sbjct: 17 LGEGHFGKVELCRY-----DPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 71
Query: 146 NLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLA 205
N+VK G C +D GI+ L+ E++P+GS+ +YL PK++ + +LK A +G+
Sbjct: 72 NIVKYKGICTEDGGNGIK--LIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMD 128
Query: 206 YLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAA 264
YL Q + RD + N+L++ + K+ DFGL + + + V + + A
Sbjct: 129 YLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA 185
Query: 265 PEYVQTGRLAARSDVWSYGVFLYELIT 291
PE + + SDVWS+GV L+EL+T
Sbjct: 186 PECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 142/299 (47%), Gaps = 50/299 (16%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGGHKE-----WMTEVNFL 139
N S V+G G FG V G +K PS+K + VA+K L + G+ E ++ E + +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKL---PSKKEISVAIKTL--KVGYTEKQRRDFLGEASIM 100
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
G +H N+++L G + ++V EYM NGS+D +L K + T + + +
Sbjct: 101 GQFDHPNIIRLEGVVT----KSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRG 155
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAV 256
A G+ YL D + RD + NIL++ K+SDFGL R+ P +T +
Sbjct: 156 IASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKI 212
Query: 257 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPI----DRNRPRSEQKLLQWV 311
+ + +PE + + + SDVWSYG+ L+E+++ G RP +++ ++ + +
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP 270
Query: 312 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 370
P A ++ ++D C K+ RPK +++ +++K++
Sbjct: 271 PPMDCPAALYQLMLD---------------------CWQKDRNNRPKFEQIVSILDKLI 308
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 145/295 (49%), Gaps = 42/295 (14%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGGHKE-----WMTEVNFL 139
N S V+G G FG V G +K PS+K + VA+K L + G+ E ++ E + +
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKL---PSKKEISVAIKTL--KVGYTEKQRRDFLGEASIM 88
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
G +H N+++L G + ++V EYM NGS+D +L K + T + + +
Sbjct: 89 GQFDHPNIIRLEGVVT----KSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRG 143
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAV 256
A G+ YL D + RD + NIL++ K+SDFGL+R+ P +T +
Sbjct: 144 IASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 200
Query: 257 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYL 315
+ + +PE + + + SDVWSYG+ L+E+++ G RP S Q +++ V
Sbjct: 201 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY---WEMSNQDVIKAVD--- 252
Query: 316 SDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 370
+ +R + P ++ + L + C K+ RPK +++ +++K++
Sbjct: 253 ---EGYR--LPPPMDCP------AALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 296
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 10/202 (4%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH--KEWMTEVNFLGIVEHQNLVKL 150
+G+G FG V +D + +V VAVK+L +++ E+ L ++H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
G C R ++ L+ EY+P GS+ YL E I + L+ +G+ YL
Sbjct: 77 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 133
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 269
+ I RD + NIL++ + K+ DFGL ++ P + F V + + APE +
Sbjct: 134 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLT 190
Query: 270 TGRLAARSDVWSYGVFLYELIT 291
+ + SDVWS+GV LYEL T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 113/214 (52%), Gaps = 23/214 (10%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVE-VAVKQLGRRGGH-----KEWMTEVNFLGIVEHQ 145
VIG G FG V +G +K P +K VA+K L +GG+ +E+++E + +G EH
Sbjct: 23 VIGAGEFGEVCRGRLKA---PGKKESCVAIKTL--KGGYTERQRREFLSEASIMGQFEHP 77
Query: 146 NLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLA 205
N+++L G + + +++ E+M NG++D +L ++ T + + + A G+
Sbjct: 78 NIIRLEGVVTNS----MPVMILTEFMENGALDSFLR-LNDGQFTVIQLVGMLRGIASGMR 132
Query: 206 YLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVG---TMGY 262
YL E + RD + NIL++ K+SDFGL+R T+ +G + +
Sbjct: 133 YLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRW 189
Query: 263 AAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
APE + + + SD WSYG+ ++E+++ G RP
Sbjct: 190 TAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 121/243 (49%), Gaps = 27/243 (11%)
Query: 63 PSMSQRPSNLKEFTIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQK-VEVAVK 121
P + P+ EL ++ R VIG G FG V G +K P ++ V VA+K
Sbjct: 23 PETYEDPNRAVHQFAKELDASCIKIER--VIGAGEFGEVCSGRLKL---PGKRDVAVAIK 77
Query: 122 QLGRRGGHKE-----WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV 176
L + G+ E ++ E + +G +H N+V L G RG ++V E+M NG++
Sbjct: 78 TL--KVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVT----RGKPVMIVIEFMENGAL 131
Query: 177 DQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLS 236
D +L K + T + + + A G+ YL D + RD + NIL++ K+S
Sbjct: 132 DAFLR-KHDGQFTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVS 187
Query: 237 DFGLARL---GPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-G 292
DFGL+R+ P +T + + + APE +Q + + SDVWSYG+ ++E+++ G
Sbjct: 188 DFGLSRVIEDDPEAVYTTTGGKI--PVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG 245
Query: 293 RRP 295
RP
Sbjct: 246 ERP 248
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 150/321 (46%), Gaps = 50/321 (15%)
Query: 63 PSMSQRPSNLKEFTIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
P + P+ E++++ R VIG G FG V G +K +++ VA+K
Sbjct: 2 PHTYEDPNQAVHEFAKEIEASCITIER--VIGAGEFGEVCSGRLKLPG--KRELPVAIKT 57
Query: 123 LGRRGGHKE-----WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVD 177
L + G+ E ++ E + +G +H N++ L G + ++V EYM NGS+D
Sbjct: 58 L--KVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVT----KSKPVMIVTEYMENGSLD 111
Query: 178 QYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSD 237
+L K++ T + + + + G+ YL D + RD + NIL++ K+SD
Sbjct: 112 TFLK-KNDGQFTVIQLVGMLRGISAGMKYLS---DMGYVHRDLAARNILINSNLVCKVSD 167
Query: 238 FGLARL---GPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GR 293
FGL+R+ P +T + + + APE + + + SDVWSYG+ ++E+++ G
Sbjct: 168 FGLSRVLEDDPEAAYTTRGGKI--PIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGE 225
Query: 294 RP----IDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCL 349
RP +++ ++ ++ + P A ++ ++D C
Sbjct: 226 RPYWEMTNQDVIKAVEEGYRLPSPMDCPAALYQLMLD---------------------CW 264
Query: 350 VKNARTRPKMSEVLEMVNKIV 370
K +RPK E++ M++K++
Sbjct: 265 QKERNSRPKFDEIVNMLDKLI 285
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 23/219 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL--GRRGGHKEWMTEVNFLGIVEHQNLVKL 150
+GEG FG V+ N K+ VAVK L +++ E L +++HQ++V+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYL---SPKSETI----------LTWAMRLKIA 197
G C + G L+V+EYM +G ++++L P ++ + L L +A
Sbjct: 86 FGVCTE----GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 141
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
A G+ YL G+ F + RD + N L+ + K+ DFG++R S + V +
Sbjct: 142 SQVAAGMVYL-AGLHF--VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 198
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
+ + PE + + SDVWS+GV L+E+ T G++P
Sbjct: 199 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 102/220 (46%), Gaps = 24/220 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG--RRGGHKEWMTEVNFLGIVEHQNLVKL 150
+GEG FG V+ N K+ VAVK L K++ E L ++H+++VK
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYL---SPKSETI-----------LTWAMRLKI 196
G C D D ++V+EYM +G ++++L P + + L + L I
Sbjct: 83 YGVCGDGDPL----IMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 197 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAV 256
A A G+ YL + RD + N L+ K+ DFG++R S + V
Sbjct: 139 ASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
Query: 257 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
+ + + PE + + SDVWS+GV L+E+ T G++P
Sbjct: 196 MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 101/210 (48%), Gaps = 24/210 (11%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWM----TEVNFLGIVEHQNLV 148
IG G FG VYKG +VAVK L + + EV L H N++
Sbjct: 20 IGSGSFGTVYKGKWHG--------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 71
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
+GY Q +V ++ S+ +L SET + IA+ ARG+ YLH
Sbjct: 72 LFMGYSTKP-----QLAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLH 125
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 268
II RD KS+NI L E K+ DFGLA + +H + G++ + APE +
Sbjct: 126 AK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 182
Query: 269 Q---TGRLAARSDVWSYGVFLYELITGRRP 295
+ + + +SDV+++G+ LYEL+TG+ P
Sbjct: 183 RMQDSNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 152/315 (48%), Gaps = 51/315 (16%)
Query: 75 FTIAELKSATKNFSRSV---------VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR 125
FT + A + F++ + VIG G FG V G +K +++ VA+K L
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPG--KREICVAIKTL-- 65
Query: 126 RGGH-----KEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYL 180
+ G+ +++++E + +G +H N++ L G + +++ EYM NGS+D +L
Sbjct: 66 KAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVT----KCKPVMIITEYMENGSLDAFL 121
Query: 181 SPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGL 240
K++ T + + + G+ YL D + RD + NIL++ K+SDFG+
Sbjct: 122 R-KNDGRFTVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGM 177
Query: 241 ARL---GPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPI 296
+R+ P +T + + + APE + + + SDVWSYG+ ++E+++ G RP
Sbjct: 178 SRVLEDDPEAAYTTRGGKI--PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 235
Query: 297 DRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANL-CLVKNART 355
S Q +++ ++ + +R + P ++ +L H L C K
Sbjct: 236 ---WDMSNQDVIKAIE------EGYR--LPPPMDCPIAL-------HQLMLDCWQKERSD 277
Query: 356 RPKMSEVLEMVNKIV 370
RPK +++ M++K++
Sbjct: 278 RPKFGQIVNMLDKLI 292
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 23/219 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL--GRRGGHKEWMTEVNFLGIVEHQNLVKL 150
+GEG FG V+ N K+ VAVK L +++ E L +++HQ++V+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYL---SPKSETI----------LTWAMRLKIA 197
G C + G L+V+EYM +G ++++L P ++ + L L +A
Sbjct: 80 FGVCTE----GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 135
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
A G+ YL G+ F + RD + N L+ + K+ DFG++R S + V +
Sbjct: 136 SQVAAGMVYL-AGLHF--VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 192
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
+ + PE + + SDVWS+GV L+E+ T G++P
Sbjct: 193 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 139/295 (47%), Gaps = 42/295 (14%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGGHKE-----WMTEVNFL 139
N S V+G G FG V G +K PS+K + VA+K L + G+ E ++ E + +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKL---PSKKEISVAIKTL--KVGYTEKQRRDFLGEASIM 100
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
G +H N+++L G + ++V E M NGS+D +L K + T + + +
Sbjct: 101 GQFDHPNIIRLEGVVT----KSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQLVGMLRG 155
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAV 256
A G+ YL D + RD + NIL++ K+SDFGL+R+ P +T +
Sbjct: 156 IASGMKYLS---DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 257 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYL 315
+ + +PE + + + SDVWSYG+ L+E+++ G RP S Q ++
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY---WEMSNQDVI------- 260
Query: 316 SDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 370
+ VD + + L + C K+ RPK +++ +++K++
Sbjct: 261 -------KAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 144/295 (48%), Gaps = 42/295 (14%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGGHKE-----WMTEVNFL 139
N S V+G G FG V G +K PS+K + VA+K L + G+ E ++ E + +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKL---PSKKEISVAIKTL--KVGYTEKQRRDFLGEASIM 100
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
G +H N+++L G + ++V E M NGS+D +L K + T + + +
Sbjct: 101 GQFDHPNIIRLEGVVT----KSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQLVGMLRG 155
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAV 256
A G+ YL D + RD + NIL++ K+SDFGL+R+ P +T +
Sbjct: 156 IASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 257 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYL 315
+ + +PE + + + SDVWSYG+ L+E+++ G RP S Q +++ V
Sbjct: 213 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY---WEMSNQDVIKAVD--- 264
Query: 316 SDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 370
+ +R + P ++ + L + C K+ RPK +++ +++K++
Sbjct: 265 ---EGYR--LPPPMDCP------AALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 113/214 (52%), Gaps = 23/214 (10%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVE-VAVKQLGRRGGH-----KEWMTEVNFLGIVEHQ 145
VIG G FG V +G +K P +K VA+K L +GG+ +E+++E + +G EH
Sbjct: 21 VIGAGEFGEVCRGRLKA---PGKKESCVAIKTL--KGGYTERQRREFLSEASIMGQFEHP 75
Query: 146 NLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLA 205
N+++L G + + +++ E+M NG++D +L ++ T + + + A G+
Sbjct: 76 NIIRLEGVVTNS----MPVMILTEFMENGALDSFLR-LNDGQFTVIQLVGMLRGIASGMR 130
Query: 206 YLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVG---TMGY 262
YL E + RD + NIL++ K+SDFGL+R T+ +G + +
Sbjct: 131 YLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRW 187
Query: 263 AAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
APE + + + SD WSYG+ ++E+++ G RP
Sbjct: 188 TAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 23/209 (11%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLVG 152
IG+G FG V G + ++ VAVK + + ++ E + + + H NLV+L+G
Sbjct: 201 IGKGEFGDVMLGDYRGNK-------VAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLG 253
Query: 153 YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMD 212
+ E+G +V EYM GS+ YL + ++L LK + D + YL EG +
Sbjct: 254 VIVE--EKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL-EGNN 309
Query: 213 FQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTM--GYAAPEYVQT 270
F + RD + N+L+ E AK+SDFGL + S T G + + APE ++
Sbjct: 310 F--VHRDLAARNVLVSEDNVAKVSDFGLTKEASS-------TQDTGKLPVKWTAPEALRE 360
Query: 271 GRLAARSDVWSYGVFLYELIT-GRRPIDR 298
+ + +SDVWS+G+ L+E+ + GR P R
Sbjct: 361 KKFSTKSDVWSFGILLWEIYSFGRVPYPR 389
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 23/219 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL--GRRGGHKEWMTEVNFLGIVEHQNLVKL 150
+GEG FG V+ N K+ VAVK L +++ E L +++HQ++V+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYL---SPKSETI----------LTWAMRLKIA 197
G C + G L+V+EYM +G ++++L P ++ + L L +A
Sbjct: 109 FGVCTE----GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
A G+ YL G+ F + RD + N L+ + K+ DFG++R S + V +
Sbjct: 165 SQVAAGMVYL-AGLHF--VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 221
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
+ + PE + + SDVWS+GV L+E+ T G++P
Sbjct: 222 LPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 144/295 (48%), Gaps = 42/295 (14%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGRRGGHKE-----WMTEVNFL 139
N S V+G G FG V G +K PS+K + VA+K L + G+ E ++ E + +
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKL---PSKKEISVAIKTL--KVGYTEKQRRDFLGEASIM 71
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
G +H N+++L G + ++V E M NGS+D +L K + T + + +
Sbjct: 72 GQFDHPNIIRLEGVVT----KSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQLVGMLRG 126
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAV 256
A G+ YL D + RD + NIL++ K+SDFGL+R+ P +T +
Sbjct: 127 IASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 183
Query: 257 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYL 315
+ + +PE + + + SDVWSYG+ L+E+++ G RP S Q +++ V
Sbjct: 184 --PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY---WEMSNQDVIKAVD--- 235
Query: 316 SDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 370
+ +R + P ++ + L + C K+ RPK +++ +++K++
Sbjct: 236 ---EGYR--LPPPMDCP------AALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 279
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 10/202 (4%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH--KEWMTEVNFLGIVEHQNLVKL 150
+G+G FG V +D + +V VAVK+L +++ E+ L ++H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
G C R ++ L+ EY+P GS+ YL +E I + L+ +G+ YL
Sbjct: 80 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQAHAERIDHIKL-LQYTSQICKGMEYLGTK 136
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 269
+ I RD + NIL++ + K+ DFGL ++ P + V + + APE +
Sbjct: 137 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 270 TGRLAARSDVWSYGVFLYELIT 291
+ + SDVWS+GV LYEL T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 23/209 (11%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLVG 152
IG+G FG V G + ++ VAVK + + ++ E + + + H NLV+L+G
Sbjct: 14 IGKGEFGDVMLGDYRGNK-------VAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLG 66
Query: 153 YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMD 212
+ E+G +V EYM GS+ YL + ++L LK + D + YL EG +
Sbjct: 67 VIVE--EKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL-EGNN 122
Query: 213 FQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTM--GYAAPEYVQT 270
F + RD + N+L+ E AK+SDFGL + S T G + + APE ++
Sbjct: 123 F--VHRDLAARNVLVSEDNVAKVSDFGLTKEASS-------TQDTGKLPVKWTAPEALRE 173
Query: 271 GRLAARSDVWSYGVFLYELIT-GRRPIDR 298
+ + +SDVWS+G+ L+E+ + GR P R
Sbjct: 174 KKFSTKSDVWSFGILLWEIYSFGRVPYPR 202
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 118/239 (49%), Gaps = 34/239 (14%)
Query: 76 TIAELKSATKNFSRSV---------VIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGR 125
T E A ++F+R + +IG G G V G ++ P Q+ V VA+K L
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRV---PGQRDVPVAIKAL-- 85
Query: 126 RGGHKE-----WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYL 180
+ G+ E +++E + +G +H N+++L G RG ++V EYM NGS+D +L
Sbjct: 86 KAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVT----RGRLAMIVTEYMENGSLDTFL 141
Query: 181 SPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGL 240
+ T + + + G+ YL D + RD + N+L+D K+SDFGL
Sbjct: 142 R-THDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGL 197
Query: 241 ARL---GPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
+R+ P +T + + + APE + ++ SDVWS+GV ++E++ G RP
Sbjct: 198 SRVLEDDPDAAYTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH--KEWMTEVNFLGIVEHQNLVKL 150
+G+G FG V +D + +V VAVK+L +++ E+ L ++H N+VK
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
G C R ++ L+ EY+P GS+ YL E I + L+ +G+ YL
Sbjct: 76 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 132
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 269
+ I RD + NIL++ + K+ DFGL ++ P + V + + APE +
Sbjct: 133 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 189
Query: 270 TGRLAARSDVWSYGVFLYELIT 291
+ + SDVWS+GV LYEL T
Sbjct: 190 ESKFSVASDVWSFGVVLYELFT 211
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 23/209 (11%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLVG 152
IG+G FG V G + ++ VAVK + + ++ E + + + H NLV+L+G
Sbjct: 29 IGKGEFGDVMLGDYRGNK-------VAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLG 81
Query: 153 YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMD 212
+ E+G +V EYM GS+ YL + ++L LK + D + YL EG +
Sbjct: 82 VIVE--EKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL-EGNN 137
Query: 213 FQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTM--GYAAPEYVQT 270
F + RD + N+L+ E AK+SDFGL + S T G + + APE ++
Sbjct: 138 F--VHRDLAARNVLVSEDNVAKVSDFGLTKEASS-------TQDTGKLPVKWTAPEALRE 188
Query: 271 GRLAARSDVWSYGVFLYELIT-GRRPIDR 298
+ + +SDVWS+G+ L+E+ + GR P R
Sbjct: 189 KKFSTKSDVWSFGILLWEIYSFGRVPYPR 217
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH--KEWMTEVNFLGIVEHQNLVKL 150
+G+G FG V +D + +V VAVK+L +++ E+ L ++H N+VK
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
G C R ++ L+ EY+P GS+ YL E I + L+ +G+ YL
Sbjct: 81 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 137
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 269
+ I RD + NIL++ + K+ DFGL ++ P + V + + APE +
Sbjct: 138 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 194
Query: 270 TGRLAARSDVWSYGVFLYELIT 291
+ + SDVWS+GV LYEL T
Sbjct: 195 ESKFSVASDVWSFGVVLYELFT 216
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 101/205 (49%), Gaps = 17/205 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVKLV 151
+G G G V+ G +VAVK L + + ++ E N + ++HQ LV+L
Sbjct: 21 LGAGQAGEVWMGYYNG------HTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
+ ++ EYM NGS+ +L S LT L +A A G+A++ E
Sbjct: 75 AVVTQEP-----IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER- 128
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD +++NIL+ + + K++DFGLARL T A + + APE + G
Sbjct: 129 --NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKF-PIKWTAPEAINYG 185
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+SDVWS+G+ L E++T GR P
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH--KEWMTEVNFLGIVEHQNLVKL 150
+G+G FG V +D + +V VAVK+L +++ E+ L ++H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
G C R ++ L+ EY+P GS+ YL E I + L+ +G+ YL
Sbjct: 77 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 133
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 269
+ I RD + NIL++ + K+ DFGL ++ P + V + + APE +
Sbjct: 134 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 270 TGRLAARSDVWSYGVFLYELIT 291
+ + SDVWS+GV LYEL T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH--KEWMTEVNFLGIVEHQNLVKL 150
+G+G FG V +D + +V VAVK+L +++ E+ L ++H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
G C R ++ L+ EY+P GS+ YL E I + L+ +G+ YL
Sbjct: 80 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 136
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 269
+ I RD + NIL++ + K+ DFGL ++ P + V + + APE +
Sbjct: 137 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 270 TGRLAARSDVWSYGVFLYELIT 291
+ + SDVWS+GV LYEL T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH--KEWMTEVNFLGIVEHQNLVKL 150
+G+G FG V +D + +V VAVK+L +++ E+ L ++H N+VK
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
G C R ++ L+ EY+P GS+ YL E I + L+ +G+ YL
Sbjct: 82 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 138
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 269
+ I RD + NIL++ + K+ DFGL ++ P + V + + APE +
Sbjct: 139 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 195
Query: 270 TGRLAARSDVWSYGVFLYELIT 291
+ + SDVWS+GV LYEL T
Sbjct: 196 ESKFSVASDVWSFGVVLYELFT 217
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH--KEWMTEVNFLGIVEHQNLVKL 150
+G+G FG V +D + +V VAVK+L +++ E+ L ++H N+VK
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
G C R ++ L+ EY+P GS+ YL E I + L+ +G+ YL
Sbjct: 75 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 131
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 269
+ I RD + NIL++ + K+ DFGL ++ P + V + + APE +
Sbjct: 132 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 188
Query: 270 TGRLAARSDVWSYGVFLYELIT 291
+ + SDVWS+GV LYEL T
Sbjct: 189 ESKFSVASDVWSFGVVLYELFT 210
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH--KEWMTEVNFLGIVEHQNLVKL 150
+G+G FG V +D + +V VAVK+L +++ E+ L ++H N+VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
G C R ++ L+ EY+P GS+ YL E I + L+ +G+ YL
Sbjct: 77 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 133
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 269
+ I RD + NIL++ + K+ DFGL ++ P + V + + APE +
Sbjct: 134 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 270 TGRLAARSDVWSYGVFLYELIT 291
+ + SDVWS+GV LYEL T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH--KEWMTEVNFLGIVEHQNLVKL 150
+G+G FG V +D + +V VAVK+L +++ E+ L ++H N+VK
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
G C R ++ L+ EY+P GS+ YL E I + L+ +G+ YL
Sbjct: 83 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 139
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 269
+ I RD + NIL++ + K+ DFGL ++ P + V + + APE +
Sbjct: 140 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 196
Query: 270 TGRLAARSDVWSYGVFLYELIT 291
+ + SDVWS+GV LYEL T
Sbjct: 197 ESKFSVASDVWSFGVVLYELFT 218
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH--KEWMTEVNFLGIVEHQNLVKL 150
+G+G FG V +D + +V VAVK+L +++ E+ L ++H N+VK
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
G C R ++ L+ EY+P GS+ YL E I + L+ +G+ YL
Sbjct: 108 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 164
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 269
+ I RD + NIL++ + K+ DFGL ++ P + V + + APE +
Sbjct: 165 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 221
Query: 270 TGRLAARSDVWSYGVFLYELIT 291
+ + SDVWS+GV LYEL T
Sbjct: 222 ESKFSVASDVWSFGVVLYELFT 243
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 101/202 (50%), Gaps = 10/202 (4%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH--KEWMTEVNFLGIVEHQNLVKL 150
+G+G FG V +D + +V VAVK+L +++ E+ L ++H N+VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
G C R ++ L+ E++P GS+ +YL E I + L+ +G+ YL
Sbjct: 80 KGVCYSAGRRNLK--LIMEFLPYGSLREYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 136
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 269
+ I RD + NIL++ + K+ DFGL ++ P + V + + APE +
Sbjct: 137 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 270 TGRLAARSDVWSYGVFLYELIT 291
+ + SDVWS+GV LYEL T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 115/228 (50%), Gaps = 27/228 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGIVE 143
F + V+G G FG VYKGL E K+ VA+K+L +KE + E + V+
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 77 NPHVCRLLGICLTSTVQ-----LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 127
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 257
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 128 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 182
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 304
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 183 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 228
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 115/228 (50%), Gaps = 27/228 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGIVE 143
F + V+G G FG VYKGL E K+ VA+K+L +KE + E + V+
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 76 NPHVCRLLGICLTSTVQ-----LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 126
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 257
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 127 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 304
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 182 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 227
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 115/228 (50%), Gaps = 27/228 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGIVE 143
F + V+G G FG VYKGL E K+ VA+K+L +KE + E + V+
Sbjct: 27 FKKIKVLGSGAFGTVYKGLW-IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 86 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 136
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 257
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 137 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 191
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 304
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 192 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 237
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH--KEWMTEVNFLGIVEHQNLVKL 150
+G+G FG V +D + +V VAVK+L +++ E+ L ++H N+VK
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
G C R ++ L+ EY+P GS+ YL E I + L+ +G+ YL
Sbjct: 84 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 140
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 269
+ I RD + NIL++ + K+ DFGL ++ P + V + + APE +
Sbjct: 141 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 197
Query: 270 TGRLAARSDVWSYGVFLYELIT 291
+ + SDVWS+GV LYEL T
Sbjct: 198 ESKFSVASDVWSFGVVLYELFT 219
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH--KEWMTEVNFLGIVEHQNLVKL 150
+G+G FG V +D + +V VAVK+L +++ E+ L ++H N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
G C R ++ L+ EY+P GS+ YL E I + L+ +G+ YL
Sbjct: 95 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 151
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 269
+ I RD + NIL++ + K+ DFGL ++ P + V + + APE +
Sbjct: 152 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 270 TGRLAARSDVWSYGVFLYELIT 291
+ + SDVWS+GV LYEL T
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 130/292 (44%), Gaps = 34/292 (11%)
Query: 38 GRIGSELTS-----QNVSAISVESEARPSYPSMSQRPSNLKEFTIAELKSAT-KNFSRSV 91
G +GSEL S + ++ ++ P+Y K +I++LK KN +
Sbjct: 24 GAMGSELQSPEYKLSKLRTSTIMTDYNPNYCFAG------KTSSISDLKEVPRKNITLIR 77
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFLGIVEHQNLV 148
+G G FG VY+G + + ++VAVK L ++ ++ E + HQN+V
Sbjct: 78 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 137
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS-----PKSETILTWAMRLKIAQDAARG 203
+ +G + + R ++ E M G + +L P + L L +A+D A G
Sbjct: 138 RCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 193
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGLARLGPSEGFTHVSTAVVGTM 260
YL E I RD + N LL AK+ DFG+AR G+ + +
Sbjct: 194 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV 250
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWV 311
+ PE G +++D WS+GV L+E+ + G P +S Q++L++V
Sbjct: 251 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFV 299
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 115/228 (50%), Gaps = 27/228 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGIVE 143
F + V+G G FG VYKGL E K+ VA+K+L +KE + E + V+
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 79 NPHVCRLLGICLTSTVQ-----LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 129
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 257
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 130 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 304
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 185 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 230
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 115/228 (50%), Gaps = 27/228 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGIVE 143
F + V+G G FG VYKGL E K+ VA+K+L +KE + E + V+
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 80 NPHVCRLLGICLTSTVQ-----LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 130
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 257
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 131 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 185
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 304
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 186 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 231
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 115/228 (50%), Gaps = 27/228 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGIVE 143
F + V+G G FG VYKGL E K+ VA+K+L +KE + E + V+
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 77 NPHVCRLLGICLTSTVQ-----LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI---- 127
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 257
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 128 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 182
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 304
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 183 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 228
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 107/209 (51%), Gaps = 23/209 (11%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLVG 152
IG+G FG V G + ++ VAVK + + ++ E + + + H NLV+L+G
Sbjct: 20 IGKGEFGDVMLGDYRGNK-------VAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLG 72
Query: 153 YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMD 212
+ E+G +V EYM GS+ YL + ++L LK + D + YL EG +
Sbjct: 73 VIVE--EKG-GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL-EGNN 128
Query: 213 FQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTM--GYAAPEYVQT 270
F + RD + N+L+ E AK+SDFGL + ST G + + APE ++
Sbjct: 129 F--VHRDLAARNVLVSEDNVAKVSDFGLTK-------EASSTQDTGKLPVKWTAPEALRE 179
Query: 271 GRLAARSDVWSYGVFLYELIT-GRRPIDR 298
+ +SDVWS+G+ L+E+ + GR P R
Sbjct: 180 AAFSTKSDVWSFGILLWEIYSFGRVPYPR 208
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 100/210 (47%), Gaps = 24/210 (11%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWM----TEVNFLGIVEHQNLV 148
IG G FG VYKG +VAVK L + + EV L H N++
Sbjct: 32 IGSGSFGTVYKGKWHG--------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
+GY Q +V ++ S+ +L SET + IA+ ARG+ YLH
Sbjct: 84 LFMGYSTKP-----QLAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLH 137
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 268
II RD KS+NI L E K+ DFGLA +H + G++ + APE +
Sbjct: 138 AK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 194
Query: 269 Q---TGRLAARSDVWSYGVFLYELITGRRP 295
+ + + +SDV+++G+ LYEL+TG+ P
Sbjct: 195 RMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 115/228 (50%), Gaps = 27/228 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGIVE 143
F + V+G G FG VYKGL E K+ VA+K+L +KE + E + V+
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 76 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 126
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 257
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 127 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 304
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 182 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 227
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 115/228 (50%), Gaps = 27/228 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGIVE 143
F + V+G G FG VYKGL E K+ VA+K+L +KE + E + V+
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 78 NPHVCRLLGICLTSTVQ-----LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 128
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 257
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 129 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 183
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 304
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 184 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 229
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 100/210 (47%), Gaps = 24/210 (11%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWM----TEVNFLGIVEHQNLV 148
IG G FG VYKG +VAVK L + + EV L H N++
Sbjct: 32 IGSGSFGTVYKGKWHG--------DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
+GY Q +V ++ S+ +L SET + IA+ ARG+ YLH
Sbjct: 84 LFMGYST-----APQLAIVTQWCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLH 137
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 268
II RD KS+NI L E K+ DFGLA +H + G++ + APE +
Sbjct: 138 AK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 194
Query: 269 Q---TGRLAARSDVWSYGVFLYELITGRRP 295
+ + + +SDV+++G+ LYEL+TG+ P
Sbjct: 195 RMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 101/202 (50%), Gaps = 10/202 (4%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH--KEWMTEVNFLGIVEHQNLVKL 150
+G+G FG V +D + +V VAVK+L +++ E+ L ++H N+VK
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
G C R ++ L+ EY+P GS+ YL E I + L+ +G+ YL
Sbjct: 78 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 134
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 269
+ I R+ + NIL++ + K+ DFGL ++ P + + V + + APE +
Sbjct: 135 ---RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLT 191
Query: 270 TGRLAARSDVWSYGVFLYELIT 291
+ + SDVWS+GV LYEL T
Sbjct: 192 ESKFSVASDVWSFGVVLYELFT 213
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 130/292 (44%), Gaps = 34/292 (11%)
Query: 38 GRIGSELTS-----QNVSAISVESEARPSYPSMSQRPSNLKEFTIAELKSAT-KNFSRSV 91
G +GSEL S + ++ ++ P+Y K +I++LK KN +
Sbjct: 1 GAMGSELQSPEYKLSKLRTSTIMTDYNPNYCFAG------KTSSISDLKEVPRKNITLIR 54
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFLGIVEHQNLV 148
+G G FG VY+G + + ++VAVK L ++ ++ E + HQN+V
Sbjct: 55 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIV 114
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS-----PKSETILTWAMRLKIAQDAARG 203
+ +G + + R ++ E M G + +L P + L L +A+D A G
Sbjct: 115 RCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 170
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGLARLGPSEGFTHVSTAVVGTM 260
YL E I RD + N LL AK+ DFG+AR G+ + +
Sbjct: 171 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV 227
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWV 311
+ PE G +++D WS+GV L+E+ + G P +S Q++L++V
Sbjct: 228 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS---KSNQEVLEFV 276
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH--KEWMTEVNFLGIVEHQNLVKL 150
+G+G FG V +D + +V VAVK+L +++ E+ L ++H N+VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEV-VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
G C R ++ L+ EY+P GS+ YL E I + L+ +G+ YL
Sbjct: 95 KGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTK 151
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG-FTHVSTAVVGTMGYAAPEYVQ 269
+ I RD + NIL++ + K+ DFGL ++ P + V + + APE +
Sbjct: 152 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 270 TGRLAARSDVWSYGVFLYELIT 291
+ + SDVWS+GV LYEL T
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 115/228 (50%), Gaps = 27/228 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGIVE 143
F + V+G G FG VYKGL E K+ VA+K+L +KE + E + V+
Sbjct: 17 FKKIKVLGSGAFGTVYKGLW-IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 76 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 126
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 257
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 127 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 304
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 182 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 227
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 115/228 (50%), Gaps = 27/228 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGIVE 143
F + V+G G FG VYKGL E K+ VA+K+L +KE + E + V+
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
+ ++ +L+G C + I +L MP G + Y+ S+ +L W +++
Sbjct: 70 NPHVCRLLGICLTSTVQLITQL-----MPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 120
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 257
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 121 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 175
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 304
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 176 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 221
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 115/228 (50%), Gaps = 27/228 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGIVE 143
F + V+G G FG VYKGL E K+ VA+K+L +KE + E + V+
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 79 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 129
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 257
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 130 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 304
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 185 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 230
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 115/228 (50%), Gaps = 27/228 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGIVE 143
F + V+G G FG VYKGL E K+ VA+K+L +KE + E + V+
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 78 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 128
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 257
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 129 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 183
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 304
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 184 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 229
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 115/228 (50%), Gaps = 27/228 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGIVE 143
F + V+G G FG VYKGL E K+ VA+K+L +KE + E + V+
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 82 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 132
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 257
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 133 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 187
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 304
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 188 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 233
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 115/228 (50%), Gaps = 27/228 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGIVE 143
F + V+G G FG VYKGL E K+ VA+K+L +KE + E + V+
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 76 NPHVCRLLGICLTSTVQ-----LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI---- 126
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 257
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 127 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 304
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 182 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 227
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 108/223 (48%), Gaps = 41/223 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL---GRRGGHKEWMTEVNFLG-IVEHQNL 147
VIGEG FG V K IK +++ A+K++ + H+++ E+ L + H N+
Sbjct: 22 VIGEGNFGQVLKARIKKD---GLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 148 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYL--------------SPKSETILTWAMR 193
+ L+G C + RG L + EY P+G++ +L + + + L+
Sbjct: 79 INLLGAC---EHRGYLYLAI-EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A D ARG+ YL + Q I RD + NIL+ E + AK++DFGL+R
Sbjct: 135 LHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR--------GQE 183
Query: 254 TAVVGTMG-----YAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
V TMG + A E + SDVWSYGV L+E+++
Sbjct: 184 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 115/228 (50%), Gaps = 27/228 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGIVE 143
F + V+G G FG VYKGL E K+ VA+K+L +KE + E + V+
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 79 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 129
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 257
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 130 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 304
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 185 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 230
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 115/228 (50%), Gaps = 27/228 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGIVE 143
F + V+G G FG VYKGL E K+ VA+K+L +KE + E + V+
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 79 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 129
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 257
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 130 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 184
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 304
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 185 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 230
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 108/223 (48%), Gaps = 41/223 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL---GRRGGHKEWMTEVNFLG-IVEHQNL 147
VIGEG FG V K IK +++ A+K++ + H+++ E+ L + H N+
Sbjct: 32 VIGEGNFGQVLKARIKKD---GLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 148 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYL--------------SPKSETILTWAMR 193
+ L+G C + RG L + EY P+G++ +L + + + L+
Sbjct: 89 INLLGAC---EHRGYLYLAI-EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A D ARG+ YL + Q I RD + NIL+ E + AK++DFGL+R
Sbjct: 145 LHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR--------GQE 193
Query: 254 TAVVGTMG-----YAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
V TMG + A E + SDVWSYGV L+E+++
Sbjct: 194 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 115/228 (50%), Gaps = 27/228 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGIVE 143
F + V+G G FG VYKGL E K+ VA+K+L +KE + E + V+
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 101 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 151
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 257
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 152 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 206
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 304
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 207 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 252
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 115/228 (50%), Gaps = 27/228 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGIVE 143
F + V+G G FG VYKGL E K+ VA+K+L +KE + E + V+
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 83 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 133
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 257
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 134 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 304
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 189 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 234
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 111/213 (52%), Gaps = 21/213 (9%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-----WMTEVNFLGIVEHQN 146
VIG G FG V G +K +++ VA+K L + G+ E +++E + +G +H N
Sbjct: 14 VIGAGEFGEVCSGHLKLPG--KREIFVAIKTL--KSGYTEKQRRDFLSEASIMGQFDHPN 69
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 206
++ L G + +++ E+M NGS+D +L +++ T + + + A G+ Y
Sbjct: 70 VIHLEGVVT----KSTPVMIITEFMENGSLDSFLR-QNDGQFTVIQLVGMLRGIAAGMKY 124
Query: 207 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVG---TMGYA 263
L D + R + NIL++ K+SDFGL+R + T+ +G + +
Sbjct: 125 L---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWT 181
Query: 264 APEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
APE +Q + + SDVWSYG+ ++E+++ G RP
Sbjct: 182 APEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 117/239 (48%), Gaps = 34/239 (14%)
Query: 76 TIAELKSATKNFSRSV---------VIGEGGFGCVYKGLIKNSEDPSQK-VEVAVKQLGR 125
T E A ++F+R + +IG G G V G ++ P Q+ V VA+K L
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRV---PGQRDVPVAIKAL-- 85
Query: 126 RGGHKE-----WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYL 180
+ G+ E +++E + +G +H N+++L G RG ++V EYM NGS+D +L
Sbjct: 86 KAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVT----RGRLAMIVTEYMENGSLDTFL 141
Query: 181 SPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGL 240
+ T + + + G+ YL D + RD + N+L+D K+SDFGL
Sbjct: 142 R-THDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGL 197
Query: 241 ARL---GPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
+R+ P T + + + APE + ++ SDVWS+GV ++E++ G RP
Sbjct: 198 SRVLEDDPDAAXTTTGGKI--PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 114/228 (50%), Gaps = 27/228 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGIVE 143
F + V+G G FG VYKGL E K+ VA+K+L +KE + E + V+
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 73 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 123
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 257
A G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 124 --AEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 178
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 304
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 179 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 224
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 124/291 (42%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY KNS K +A+K QL + G + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNS-----KFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 61 IQSHLRHPNILRLYGYFHD----STRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 117 L------ANALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 163
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
A+ GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 164 AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRV-- 221
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 222 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 122/244 (50%), Gaps = 29/244 (11%)
Query: 71 NLKEFTIAELKSATKNFSRSV-----VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR 125
+L +AE+K R V VIG+G FG VY G + + +++ A+K L R
Sbjct: 2 DLDSALLAEVKDVLIPHERVVTHSDRVIGKGHFGVVYHG--EYIDQAQNRIQCAIKSLSR 59
Query: 126 RGGHKE---WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-- 180
++ ++ E + + H N++ L+G + G+ +L+ YM +G + Q++
Sbjct: 60 ITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPE--GLPHVLL-PYMCHGDLLQFIRS 116
Query: 181 ---SPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSD 237
+P + ++++ +++ ARG+ YL E + + RD + N +LDE + K++D
Sbjct: 117 PQRNPTVKDLISFGLQV------ARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVAD 167
Query: 238 FGLARLGPSEGFTHVSTAVVGTMG--YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 295
FGLAR + V + + A E +QT R +SDVWS+GV L+EL+T P
Sbjct: 168 FGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
Query: 296 IDRN 299
R+
Sbjct: 228 PYRH 231
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 143/289 (49%), Gaps = 42/289 (14%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH-----KEWMTEVNFLGIVEHQN 146
VIG G FG V G +K +++ VA+K L + G+ +++++E + +G +H N
Sbjct: 21 VIGVGEFGEVCSGRLKVPG--KREICVAIKTL--KAGYTDKQRRDFLSEASIMGQFDHPN 76
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 206
++ L G + +++ EYM NGS+D +L K++ T + + + G+ Y
Sbjct: 77 IIHLEGVVT----KCKPVMIITEYMENGSLDAFLR-KNDGRFTVIQLVGMLRGIGSGMKY 131
Query: 207 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAVVGTMGYA 263
L D + RD + NIL++ K+SDFG++R+ P +T + + +
Sbjct: 132 LS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWT 186
Query: 264 APEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSDAKQFR 322
APE + + + SDVWSYG+ ++E+++ G RP S Q +++ ++ + +R
Sbjct: 187 APEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY---WDMSNQDVIKAIE------EGYR 237
Query: 323 QIVDPRLEGKYSLRLVSKLSHVANL-CLVKNARTRPKMSEVLEMVNKIV 370
+ P ++ +L H L C K RPK +++ M++K++
Sbjct: 238 --LPPPMDCPIAL-------HQLMLDCWQKERSDRPKFGQIVNMLDKLI 277
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 143/289 (49%), Gaps = 42/289 (14%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH-----KEWMTEVNFLGIVEHQN 146
VIG G FG V G +K +++ VA+K L + G+ +++++E + +G +H N
Sbjct: 15 VIGVGEFGEVCSGRLKVPG--KREICVAIKTL--KAGYTDKQRRDFLSEASIMGQFDHPN 70
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 206
++ L G + +++ EYM NGS+D +L K++ T + + + G+ Y
Sbjct: 71 IIHLEGVVT----KCKPVMIITEYMENGSLDAFLR-KNDGRFTVIQLVGMLRGIGSGMKY 125
Query: 207 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAVVGTMGYA 263
L D + RD + NIL++ K+SDFG++R+ P +T + + +
Sbjct: 126 LS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIRWT 180
Query: 264 APEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSDAKQFR 322
APE + + + SDVWSYG+ ++E+++ G RP S Q +++ ++ + +R
Sbjct: 181 APEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY---WDMSNQDVIKAIE------EGYR 231
Query: 323 QIVDPRLEGKYSLRLVSKLSHVANL-CLVKNARTRPKMSEVLEMVNKIV 370
+ P ++ +L H L C K RPK +++ M++K++
Sbjct: 232 --LPPPMDCPIAL-------HQLMLDCWQKERSDRPKFGQIVNMLDKLI 271
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH--KEWMTEVNFLGIVEHQNLVKL 150
+G G FG V+ G NS +VAVK L + G + ++ E N + ++H LV+L
Sbjct: 21 LGAGQFGEVWMGYYNNS------TKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRL 73
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
Y E I ++ EYM GS+ +L + + + A G+AY+
Sbjct: 74 --YAVVTREEPI--YIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 129
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 270
I RD +++N+L+ E K++DFGLAR+ +T A + + APE +
Sbjct: 130 ---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINF 185
Query: 271 GRLAARSDVWSYGVFLYELIT-GRRP 295
G +SDVWS+G+ LYE++T G+ P
Sbjct: 186 GCFTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 113/223 (50%), Gaps = 16/223 (7%)
Query: 92 VIGEGGFGCVYKGL-IKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGIVEHQNL 147
V+G G FG VYKG+ I + E+ K+ VA+K L +KE + E + V +
Sbjct: 24 VLGSGAFGTVYKGIWIPDGEN--VKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYV 81
Query: 148 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 207
+L+G C + + +L+ Y + + + S+ +L W M++ A+G++YL
Sbjct: 82 SRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------AKGMSYL 135
Query: 208 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEY 267
D +++ RD + N+L+ + K++DFGLARL + + + + + A E
Sbjct: 136 E---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALES 192
Query: 268 VQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQ 309
+ R +SDVWSYGV ++EL+T G +P D R LL+
Sbjct: 193 ILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLE 235
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 101/209 (48%), Gaps = 16/209 (7%)
Query: 90 SVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVK 149
S IG G FG VYKG K D + K+ V + + + EV L H N++
Sbjct: 41 STRIGSGSFGTVYKG--KWHGDVAVKILKVVDPTPEQ--FQAFRNEVAVLRKTRHVNILL 96
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
+GY D+ +V ++ S+ ++L + ET + IA+ A+G+ YLH
Sbjct: 97 FMGYMTKDN-----LAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHA 150
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 269
II RD KS+NI L E K+ DFGLA + + G++ + APE ++
Sbjct: 151 K---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIR 207
Query: 270 ---TGRLAARSDVWSYGVFLYELITGRRP 295
+ +SDV+SYG+ LYEL+TG P
Sbjct: 208 MQDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVK 149
V +G+G FG V+ G + VA+K L E ++ E + + H+ LV+
Sbjct: 273 VKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 326
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
L +++ +V EYM GS+ +L ++ L + +A A G+AY+ E
Sbjct: 327 LYAVVSEEP-----IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-E 380
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 269
M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 381 RMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAAL 437
Query: 270 TGRLAARSDVWSYGVFLYELIT-GRRP 295
GR +SDVWS+G+ L EL T GR P
Sbjct: 438 YGRFTIKSDVWSFGILLTELTTKGRVP 464
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 112/223 (50%), Gaps = 28/223 (12%)
Query: 86 NFSRSVVIGEGGFGCVYKGL-IKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGI 141
F + V+G G FG VYKGL I E K+ VA+ +L +KE + E +
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGE--KVKIPVAIMELREATSPKANKEILDEAYVMAS 107
Query: 142 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKI 196
V++ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 108 VDNPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI-- 160
Query: 197 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTA 255
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H
Sbjct: 161 ----AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 213
Query: 256 VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPID 297
V + + A E + +SDVWSYGV ++EL+T G +P D
Sbjct: 214 KV-PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVK 149
V +G+G FG V+ G + VA+K L E ++ E + + H+ LV+
Sbjct: 190 VKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 243
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
L +++ +V EYM GS+ +L ++ L + +A A G+AY+ E
Sbjct: 244 LYAVVSEEP-----IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-E 297
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 269
M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 298 RMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAAL 354
Query: 270 TGRLAARSDVWSYGVFLYELIT-GRRP 295
GR +SDVWS+G+ L EL T GR P
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 122/291 (41%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY K S K +A+K QL + G + EV
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G V + L S + T+
Sbjct: 66 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITE 121
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 122 L------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 168
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 169 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-- 226
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 227 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 261
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVK 149
V +G+G FG V+ G + VA+K L E ++ E + + H+ LV+
Sbjct: 190 VKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 243
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
L +++ +V EYM GS+ +L ++ L + +A A G+AY+ E
Sbjct: 244 LYAVVSEEP-----IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-E 297
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 269
M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 298 RMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAAL 354
Query: 270 TGRLAARSDVWSYGVFLYELIT-GRRP 295
GR +SDVWS+G+ L EL T GR P
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVK 149
V +G+G FG V+ G + VA+K L E ++ E + + H+ LV+
Sbjct: 17 VKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 70
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
L +++ +V EYM GS+ +L ++ L + +A A G+AY+ E
Sbjct: 71 LYAVVSEEP-----IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-E 124
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 269
M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 125 RMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAAL 181
Query: 270 TGRLAARSDVWSYGVFLYELIT-GRRP 295
GR +SDVWS+G+ L EL T GR P
Sbjct: 182 YGRFTIKSDVWSFGILLTELTTKGRVP 208
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 123/291 (42%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY K S K +A+K QL + G + EV
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 87 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 142
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 143 L------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 189
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 190 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-- 247
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 248 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 282
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 114/228 (50%), Gaps = 27/228 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGIVE 143
F + V+G G FG VYKGL E K+ VA+K+L +KE + E + V+
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 80 NPHVCRLLGICLTSTVQ-----LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 130
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL-GPSEGFTHVSTAVV 257
A+G+ YL D +++ RD + N+L+ + K++DFG A+L G E H V
Sbjct: 131 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 185
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 304
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 186 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 231
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 126/282 (44%), Gaps = 38/282 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWM----TEVNFLGIVEHQNLV 148
IG G FG VYKG +VAVK L + + EV L H N++
Sbjct: 43 IGSGSFGTVYKG--------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 94
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
+GY Q +V ++ S+ +L ET + IA+ A+G+ YLH
Sbjct: 95 LFMGYSTKP-----QLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLH 148
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 268
II RD KS+NI L E K+ DFGLA + +H + G++ + APE +
Sbjct: 149 AK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 205
Query: 269 QT---GRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLS-DAKQFRQI 324
+ + +SDV+++G+ LYEL+TG+ P N +Q + + YLS D + R
Sbjct: 206 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSKVRSN 264
Query: 325 VDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMV 366
++ RL+++ CL K RP ++L +
Sbjct: 265 CPKAMK-----RLMAE-------CLKKKRDERPLFPQILASI 294
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 108/223 (48%), Gaps = 41/223 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL---GRRGGHKEWMTEVNFLG-IVEHQNL 147
VIGEG FG V K IK +++ A+K++ + H+++ E+ L + H N+
Sbjct: 29 VIGEGNFGQVLKARIKKD---GLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 85
Query: 148 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYL--------------SPKSETILTWAMR 193
+ L+G C + RG L + EY P+G++ +L + + + L+
Sbjct: 86 INLLGAC---EHRGYLYLAI-EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A D ARG+ YL + Q I R+ + NIL+ E + AK++DFGL+R
Sbjct: 142 LHFAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSR--------GQE 190
Query: 254 TAVVGTMG-----YAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
V TMG + A E + SDVWSYGV L+E+++
Sbjct: 191 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 123/291 (42%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY K S K +A+K QL + G + EV
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVEHQLRREVE 77
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 78 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 133
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 134 L------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 180
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 181 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-- 238
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 239 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 273
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 114/228 (50%), Gaps = 27/228 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGIVE 143
F + V+ G FG VYKGL E K+ VA+K+L +KE + E + V+
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 83 NPHVCRLLGICLTSTVQ-----LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 133
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 257
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 134 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 304
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 189 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 234
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 123/291 (42%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY K S K +A+K QL + G + EV
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 66 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 122 L------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 168
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 169 TTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-- 226
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 227 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPXLREVLE 261
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 126/282 (44%), Gaps = 38/282 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWM----TEVNFLGIVEHQNLV 148
IG G FG VYKG +VAVK L + + EV L H N++
Sbjct: 21 IGSGSFGTVYKG--------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
+GY Q +V ++ S+ +L ET + IA+ A+G+ YLH
Sbjct: 73 LFMGYSTKP-----QLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH 126
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 268
II RD KS+NI L E K+ DFGLA + +H + G++ + APE +
Sbjct: 127 AK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 183
Query: 269 QT---GRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLS-DAKQFRQI 324
+ + +SDV+++G+ LYEL+TG+ P R +Q + + YLS D + R
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-DQIIFMVGRGYLSPDLSKVRSN 242
Query: 325 VDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMV 366
++ RL+++ CL K RP ++L +
Sbjct: 243 CPKAMK-----RLMAE-------CLKKKRDERPLFPQILASI 272
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 126/282 (44%), Gaps = 38/282 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWM----TEVNFLGIVEHQNLV 148
IG G FG VYKG +VAVK L + + EV L H N++
Sbjct: 18 IGSGSFGTVYKG--------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 69
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
+GY Q +V ++ S+ +L ET + IA+ A+G+ YLH
Sbjct: 70 LFMGYSTKP-----QLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH 123
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 268
II RD KS+NI L E K+ DFGLA + +H + G++ + APE +
Sbjct: 124 AK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 180
Query: 269 QT---GRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLS-DAKQFRQI 324
+ + +SDV+++G+ LYEL+TG+ P N +Q + + YLS D + R
Sbjct: 181 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSKVRSN 239
Query: 325 VDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMV 366
++ RL+++ CL K RP ++L +
Sbjct: 240 CPKAMK-----RLMAE-------CLKKKRDERPLFPQILASI 269
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 112/222 (50%), Gaps = 36/222 (16%)
Query: 93 IGEGGFGCVYKG-LIKNSEDPSQKVEVAVKQL--GRRGGH-------KEWMTEVNFLGIV 142
IG+GGFG V+KG L+K+ K VA+K L G G +E+ EV + +
Sbjct: 27 IGKGGFGLVHKGRLVKD------KSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 143 EHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAAR 202
H N+VKL G + +V E++P G + L K+ I W+++L++ D A
Sbjct: 81 NHPNIVKLYGLMHNPPR------MVMEFVPCGDLYHRLLDKAHPI-KWSVKLRLMLDIAL 133
Query: 203 GLAYLHEGMDFQIIVRDFKSSNILL---DEQWN--AKLSDFGLARLGPSEGFTHVSTAVV 257
G+ Y+ + + I+ RD +S NI L DE AK++DFGL S+ H + ++
Sbjct: 134 GIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL-----SQQSVHSVSGLL 187
Query: 258 GTMGYAAPEYV--QTGRLAARSDVWSYGVFLYELITGRRPID 297
G + APE + + ++D +S+ + LY ++TG P D
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 126/282 (44%), Gaps = 38/282 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWM----TEVNFLGIVEHQNLV 148
IG G FG VYKG +VAVK L + + EV L H N++
Sbjct: 21 IGSGSFGTVYKG--------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
+GY Q +V ++ S+ +L ET + IA+ A+G+ YLH
Sbjct: 73 LFMGYSTKP-----QLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH 126
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 268
II RD KS+NI L E K+ DFGLA + +H + G++ + APE +
Sbjct: 127 AK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 183
Query: 269 QT---GRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLS-DAKQFRQI 324
+ + +SDV+++G+ LYEL+TG+ P N +Q + + YLS D + R
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSKVRSN 242
Query: 325 VDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMV 366
++ RL+++ CL K RP ++L +
Sbjct: 243 CPKAMK-----RLMAE-------CLKKKRDERPLFPQILASI 272
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 126/282 (44%), Gaps = 38/282 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWM----TEVNFLGIVEHQNLV 148
IG G FG VYKG +VAVK L + + EV L H N++
Sbjct: 44 IGSGSFGTVYKG--------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
+GY Q +V ++ S+ +L ET + IA+ A+G+ YLH
Sbjct: 96 LFMGYSTKP-----QLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLH 149
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 268
II RD KS+NI L E K+ DFGLA + +H + G++ + APE +
Sbjct: 150 AK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 206
Query: 269 QT---GRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLS-DAKQFRQI 324
+ + +SDV+++G+ LYEL+TG+ P N +Q + + YLS D + R
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSKVRSN 265
Query: 325 VDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMV 366
++ RL+++ CL K RP ++L +
Sbjct: 266 CPKAMK-----RLMAE-------CLKKKRDERPLFPQILASI 295
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVK 149
V +G+G FG V+ G + VA+K L E ++ E + + H+ LV+
Sbjct: 190 VKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 243
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
L +++ +V EYM GS+ +L ++ L + +A A G+AY+ E
Sbjct: 244 LYAVVSEEP-----IYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-E 297
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 269
M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 298 RMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAAL 354
Query: 270 TGRLAARSDVWSYGVFLYELIT-GRRP 295
GR +SDVWS+G+ L EL T GR P
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 114/228 (50%), Gaps = 27/228 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGIVE 143
F + V+G G FG VYKGL E K+ VA+K+L +KE + E + V+
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 78 NPHVCRLLGICLTSTVQ-----LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 128
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL-GPSEGFTHVSTAVV 257
A+G+ YL D +++ RD + N+L+ + K++DFG A+L G E H V
Sbjct: 129 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 304
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 184 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 229
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 114/228 (50%), Gaps = 27/228 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGIVE 143
F + V+ G FG VYKGL E K+ VA+K+L +KE + E + V+
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 76 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 126
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 257
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 127 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 304
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 182 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 227
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 114/228 (50%), Gaps = 27/228 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGIVE 143
F + V+G G FG VYKGL E K+ VA+K+L +KE + E + V+
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 78 NPHVCRLLGICLTSTVQ-----LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 128
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL-GPSEGFTHVSTAVV 257
A+G+ YL D +++ RD + N+L+ + K++DFG A+L G E H V
Sbjct: 129 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 304
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 184 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 229
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 114/228 (50%), Gaps = 27/228 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGIVE 143
F + V+ G FG VYKGL E K+ VA+K+L +KE + E + V+
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 83 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 133
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 257
A+G+ YL D +++ RD + N+L+ + K++DFGLA+ LG E H V
Sbjct: 134 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 304
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 189 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 234
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 123/291 (42%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY K S K +A+K QL + G + EV
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 66 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 122 L------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 168
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 169 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-- 226
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 227 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 261
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 129/284 (45%), Gaps = 32/284 (11%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH-KEWMTEVNFLGIVEHQNLVKLV 151
+G G +G VY+G+ K + VAVK L +E++ E + ++H NLV+L+
Sbjct: 19 LGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C R ++ E+M G++ YL + ++ + L +A + + YL +
Sbjct: 74 GVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK- 128
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD + N L+ E K++DFGL+RL + FT + A + + APE +
Sbjct: 129 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKF-PIKWTAPESLAYN 185
Query: 272 RLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRLE 330
+ + +SDVW++GV L+E+ T G P P +LL+ K +R R E
Sbjct: 186 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE---------KDYRM---ERPE 233
Query: 331 GKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDASA 374
G K+ + C N RP +E+ + + S+
Sbjct: 234 G-----CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 272
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 23/252 (9%)
Query: 73 KEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE 131
K +I++LK KN + +G G FG VY+G + + ++VAVK L ++
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 77
Query: 132 ---WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS-----PK 183
++ E + + HQN+V+ +G + + R ++ E M G + +L P
Sbjct: 78 ELDFLMEALIISKLNHQNIVRCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 184 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGL 240
+ L L +A+D A G YL E I RD + N LL AK+ DFG+
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 190
Query: 241 ARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRN 299
AR + + + + PE G +++D WS+GV L+E+ + G P
Sbjct: 191 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 249
Query: 300 RPRSEQKLLQWV 311
+S Q++L++V
Sbjct: 250 --KSNQEVLEFV 259
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 126/282 (44%), Gaps = 38/282 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWM----TEVNFLGIVEHQNLV 148
IG G FG VYKG +VAVK L + + EV L H N++
Sbjct: 16 IGSGSFGTVYKG--------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
+GY Q +V ++ S+ +L ET + IA+ A+G+ YLH
Sbjct: 68 LFMGYSTKP-----QLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH 121
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 268
II RD KS+NI L E K+ DFGLA + +H + G++ + APE +
Sbjct: 122 AK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 269 QT---GRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLS-DAKQFRQI 324
+ + +SDV+++G+ LYEL+TG+ P N +Q + + YLS D + R
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSKVRSN 237
Query: 325 VDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMV 366
++ RL+++ CL K RP ++L +
Sbjct: 238 CPKAMK-----RLMAE-------CLKKKRDERPLFPQILASI 267
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 98/208 (47%), Gaps = 20/208 (9%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
V+G G FG V K + + VA+KQ+ K ++ E+ L V H N+VKL
Sbjct: 15 VVGRGAFGVVCKAKWRAKD-------VAIKQIESESERKAFIVELRQLSRVNHPNIVKLY 67
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYL-SPKSETILTWAMRLKIAQDAARGLAYLHEG 210
G C + LV EY GS+ L + T A + ++G+AYLH
Sbjct: 68 GACLNP------VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM 121
Query: 211 MDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 269
+I RD K N+LL K+ DFG A + TH+ T G+ + APE +
Sbjct: 122 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM-TNNKGSAAWMAPEVFE 176
Query: 270 TGRLAARSDVWSYGVFLYELITGRRPID 297
+ + DV+S+G+ L+E+IT R+P D
Sbjct: 177 GSNYSEKCDVFSWGIILWEVITRRKPFD 204
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 123/291 (42%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY K S K +A+K QL + G + EV
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 64 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 120 L------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 166
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 167 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-- 224
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 225 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 114/228 (50%), Gaps = 27/228 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGIVE 143
F + V+G G FG VYKGL E K+ VA+K+L +KE + E + V+
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 76 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 126
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL-GPSEGFTHVSTAVV 257
A+G+ YL D +++ RD + N+L+ + K++DFG A+L G E H V
Sbjct: 127 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 181
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 304
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 182 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 227
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 114/228 (50%), Gaps = 27/228 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGIVE 143
F + V+G G FG VYKGL E K+ VA+K+L +KE + E + V+
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 78 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 128
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL-GPSEGFTHVSTAVV 257
A+G+ YL D +++ RD + N+L+ + K++DFG A+L G E H V
Sbjct: 129 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 183
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 304
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 184 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 229
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 98/208 (47%), Gaps = 20/208 (9%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
V+G G FG V K + + VA+KQ+ K ++ E+ L V H N+VKL
Sbjct: 16 VVGRGAFGVVCKAKWRAKD-------VAIKQIESESERKAFIVELRQLSRVNHPNIVKLY 68
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYL-SPKSETILTWAMRLKIAQDAARGLAYLHEG 210
G C + LV EY GS+ L + T A + ++G+AYLH
Sbjct: 69 GACLNP------VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM 122
Query: 211 MDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 269
+I RD K N+LL K+ DFG A + TH+ T G+ + APE +
Sbjct: 123 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM-TNNKGSAAWMAPEVFE 177
Query: 270 TGRLAARSDVWSYGVFLYELITGRRPID 297
+ + DV+S+G+ L+E+IT R+P D
Sbjct: 178 GSNYSEKCDVFSWGIILWEVITRRKPFD 205
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 23/252 (9%)
Query: 73 KEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE 131
K +I++LK KN + +G G FG VY+G + + ++VAVK L ++
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 91
Query: 132 ---WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS-----PK 183
++ E + + HQN+V+ +G + + R ++ E M G + +L P
Sbjct: 92 ELDFLMEALIISKLNHQNIVRCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPS 147
Query: 184 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGL 240
+ L L +A+D A G YL E I RD + N LL AK+ DFG+
Sbjct: 148 QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 204
Query: 241 ARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRN 299
AR + + + + PE G +++D WS+GV L+E+ + G P
Sbjct: 205 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 263
Query: 300 RPRSEQKLLQWV 311
+S Q++L++V
Sbjct: 264 --KSNQEVLEFV 273
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 17/207 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVK 149
V +G+G FG V+ G + VA+K L E ++ E + + H+ LV+
Sbjct: 24 VKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQ 77
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
L +++ +V EYM GS+ +L + L + +A A G+AY+ E
Sbjct: 78 LYAVVSEEP-----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-E 131
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 269
M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 132 RMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAAL 188
Query: 270 TGRLAARSDVWSYGVFLYELIT-GRRP 295
GR +SDVWS+G+ L EL T GR P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 126/282 (44%), Gaps = 38/282 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWM----TEVNFLGIVEHQNLV 148
IG G FG VYKG +VAVK L + + EV L H N++
Sbjct: 16 IGSGSFGTVYKG--------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
+GY Q +V ++ S+ +L ET + IA+ A+G+ YLH
Sbjct: 68 LFMGYST-----APQLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH 121
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 268
II RD KS+NI L E K+ DFGLA + +H + G++ + APE +
Sbjct: 122 AK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 269 QT---GRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLS-DAKQFRQI 324
+ + +SDV+++G+ LYEL+TG+ P N +Q + + YLS D + R
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSKVRSN 237
Query: 325 VDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMV 366
++ RL+++ CL K RP ++L +
Sbjct: 238 CPKAMK-----RLMAE-------CLKKKRDERPLFPQILASI 267
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 114/228 (50%), Gaps = 27/228 (11%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG---GHKEWMTEVNFLGIVE 143
F + V+G G FG VYKGL E K+ VA+K+L +KE + E + V+
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-----SETILTWAMRLKIAQ 198
+ ++ +L+G C + L+ + MP G + Y+ S+ +L W +++
Sbjct: 83 NPHVCRLLGICLTSTVQ-----LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI---- 133
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL-GPSEGFTHVSTAVV 257
A+G+ YL D +++ RD + N+L+ + K++DFG A+L G E H V
Sbjct: 134 --AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKV 188
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSE 304
+ + A E + +SDVWSYGV ++EL+T G +P D P SE
Sbjct: 189 -PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-GIPASE 234
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 108/208 (51%), Gaps = 23/208 (11%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFL---GIVEHQNLV 148
V+G G FG V+KG + E S K+ V +K + + G + + + + G ++H ++V
Sbjct: 38 VLGSGVFGTVHKG-VWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 203
+L+G C G LV +Y+P GS+ ++ + + +L W +++ A+G
Sbjct: 97 RLLGLCP-----GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKG 145
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYA 263
+ YL E ++ R+ + N+LL +++DFG+A L P + + + + +
Sbjct: 146 MYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWM 202
Query: 264 APEYVQTGRLAARSDVWSYGVFLYELIT 291
A E + G+ +SDVWSYGV ++EL+T
Sbjct: 203 ALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 123/291 (42%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY K S K +A+K QL + G + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 61 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 117 L------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 163
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 164 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-- 221
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 222 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 73 KEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE 131
K +I++LK KN + +G G FG VY+G + + ++VAVK L ++
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 77
Query: 132 ---WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS-----PK 183
++ E + HQN+V+ +G + + R ++ E M G + +L P
Sbjct: 78 ELDFLMEALIISKFNHQNIVRCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 184 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGL 240
+ L L +A+D A G YL E I RD + N LL AK+ DFG+
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 190
Query: 241 ARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRN 299
AR + + + + PE G +++D WS+GV L+E+ + G P
Sbjct: 191 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 249
Query: 300 RPRSEQKLLQWV 311
+S Q++L++V
Sbjct: 250 --KSNQEVLEFV 259
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 73 KEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE 131
K +I++LK KN + +G G FG VY+G + + ++VAVK L ++
Sbjct: 34 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 93
Query: 132 ---WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS-----PK 183
++ E + HQN+V+ +G + + R ++ E M G + +L P
Sbjct: 94 ELDFLMEALIISKFNHQNIVRCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPS 149
Query: 184 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGL 240
+ L L +A+D A G YL E I RD + N LL AK+ DFG+
Sbjct: 150 QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 206
Query: 241 ARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRN 299
AR + + + + PE G +++D WS+GV L+E+ + G P
Sbjct: 207 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 265
Query: 300 RPRSEQKLLQWV 311
+S Q++L++V
Sbjct: 266 --KSNQEVLEFV 275
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 73 KEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE 131
K +I++LK KN + +G G FG VY+G + + ++VAVK L ++
Sbjct: 24 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 83
Query: 132 ---WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS-----PK 183
++ E + HQN+V+ +G + + R ++ E M G + +L P
Sbjct: 84 ELDFLMEALIISKFNHQNIVRCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPS 139
Query: 184 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGL 240
+ L L +A+D A G YL E I RD + N LL AK+ DFG+
Sbjct: 140 QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 196
Query: 241 ARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRN 299
AR + + + + PE G +++D WS+GV L+E+ + G P
Sbjct: 197 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 255
Query: 300 RPRSEQKLLQWV 311
+S Q++L++V
Sbjct: 256 --KSNQEVLEFV 265
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 123/291 (42%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY K S K +A+K QL + G + EV
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 62 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 118 L------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 164
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-- 222
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 223 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 257
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 73 KEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE 131
K +I++LK KN + +G G FG VY+G + + ++VAVK L ++
Sbjct: 17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 76
Query: 132 ---WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS-----PK 183
++ E + HQN+V+ +G + + R ++ E M G + +L P
Sbjct: 77 ELDFLMEALIISKFNHQNIVRCIGV----SLQSLPRFILMELMAGGDLKSFLRETRPRPS 132
Query: 184 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGL 240
+ L L +A+D A G YL E I RD + N LL AK+ DFG+
Sbjct: 133 QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 189
Query: 241 ARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRN 299
AR + + + + PE G +++D WS+GV L+E+ + G P
Sbjct: 190 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 248
Query: 300 RPRSEQKLLQWV 311
+S Q++L++V
Sbjct: 249 --KSNQEVLEFV 258
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 123/291 (42%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY K S K +A+K QL + G + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 61 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 117 L------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 163
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 164 TELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-- 221
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 222 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 73 KEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE 131
K +I++LK KN + +G G FG VY+G + + ++VAVK L ++
Sbjct: 17 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 76
Query: 132 ---WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS-----PK 183
++ E + HQN+V+ +G + + R ++ E M G + +L P
Sbjct: 77 ELDFLMEALIISKFNHQNIVRCIGV----SLQSLPRFILLELMAGGDLKSFLRETRPRPS 132
Query: 184 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGL 240
+ L L +A+D A G YL E I RD + N LL AK+ DFG+
Sbjct: 133 QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 189
Query: 241 ARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRN 299
AR + + + + PE G +++D WS+GV L+E+ + G P
Sbjct: 190 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 248
Query: 300 RPRSEQKLLQWV 311
+S Q++L++V
Sbjct: 249 --KSNQEVLEFV 258
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 73 KEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE 131
K +I++LK KN + +G G FG VY+G + + ++VAVK L ++
Sbjct: 44 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 103
Query: 132 ---WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS-----PK 183
++ E + HQN+V+ +G + + R ++ E M G + +L P
Sbjct: 104 ELDFLMEALIISKFNHQNIVRCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPS 159
Query: 184 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGL 240
+ L L +A+D A G YL E I RD + N LL AK+ DFG+
Sbjct: 160 QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 216
Query: 241 ARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRN 299
AR + + + + PE G +++D WS+GV L+E+ + G P
Sbjct: 217 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 275
Query: 300 RPRSEQKLLQWV 311
+S Q++L++V
Sbjct: 276 --KSNQEVLEFV 285
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 17/207 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVK 149
V +G+G FG V+ G + VA+K L E ++ E + + H+ LV+
Sbjct: 15 VKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 68
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
L +++ +V EYM GS+ +L + L + +A A G+AY+ E
Sbjct: 69 LYAVVSEEP-----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-E 122
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 269
M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 123 RMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAAL 179
Query: 270 TGRLAARSDVWSYGVFLYELIT-GRRP 295
GR +SDVWS+G+ L EL T GR P
Sbjct: 180 YGRFTIKSDVWSFGILLTELTTKGRVP 206
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 17/207 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVK 149
V +G+G FG V+ G + VA+K L E ++ E + + H+ LV+
Sbjct: 24 VKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
L +++ +V EYM GS+ +L + L + +A A G+AY+ E
Sbjct: 78 LYAVVSEEP-----IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-E 131
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 269
M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 132 RMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAAL 188
Query: 270 TGRLAARSDVWSYGVFLYELIT-GRRP 295
GR +SDVWS+G+ L EL T GR P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 26/221 (11%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMT-----EVNFL 139
++F ++G+G F VY+ +E +EVA+K + ++ +K M EV
Sbjct: 11 EDFKVGNLLGKGSFAGVYR-----AESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
++H ++++L Y D + LV E NG +++YL + + R + Q
Sbjct: 66 CQLKHPSILELYNYFEDSN----YVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQ- 120
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA---RLGPSEGFTHVSTAV 256
G+ YLH I+ RD SN+LL N K++DFGLA ++ + +T +
Sbjct: 121 IITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-----L 172
Query: 257 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 297
GT Y +PE SDVWS G Y L+ GR P D
Sbjct: 173 CGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 123/291 (42%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY K S K +A+K QL + G + EV
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVEHQLRREVE 59
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 60 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 115
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 116 L------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 162
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 163 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-- 220
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 221 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 255
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 73 KEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE 131
K +I++LK KN + +G G FG VY+G + + ++VAVK L ++
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 91
Query: 132 ---WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS-----PK 183
++ E + HQN+V+ +G + + R ++ E M G + +L P
Sbjct: 92 ELDFLMEALIISKFNHQNIVRCIGVSL----QSLPRFILMELMAGGDLKSFLRETRPRPS 147
Query: 184 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGL 240
+ L L +A+D A G YL E I RD + N LL AK+ DFG+
Sbjct: 148 QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 204
Query: 241 ARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRN 299
AR + + + + PE G +++D WS+GV L+E+ + G P
Sbjct: 205 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 263
Query: 300 RPRSEQKLLQWV 311
+S Q++L++V
Sbjct: 264 --KSNQEVLEFV 273
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 73 KEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE 131
K +I++LK KN + +G G FG VY+G + + ++VAVK L ++
Sbjct: 9 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 68
Query: 132 ---WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS-----PK 183
++ E + HQN+V+ +G + + R ++ E M G + +L P
Sbjct: 69 ELDFLMEALIISKFNHQNIVRCIGV----SLQSLPRFILLELMAGGDLKSFLRETRPRPS 124
Query: 184 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGL 240
+ L L +A+D A G YL E I RD + N LL AK+ DFG+
Sbjct: 125 QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 181
Query: 241 ARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRN 299
AR + + + + PE G +++D WS+GV L+E+ + G P
Sbjct: 182 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 240
Query: 300 RPRSEQKLLQWV 311
+S Q++L++V
Sbjct: 241 --KSNQEVLEFV 250
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 123/291 (42%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY K S K +A+K QL + G + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 61 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 117 L------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 163
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 164 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-- 221
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 222 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 17/207 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVK 149
V +G+G FG V+ G + VA+K L E ++ E + + H+ LV+
Sbjct: 13 VKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 66
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
L +++ +V EYM GS+ +L + L + +A A G+AY+ E
Sbjct: 67 LYAVVSEEP-----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-E 120
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 269
M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 121 RMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAAL 177
Query: 270 TGRLAARSDVWSYGVFLYELIT-GRRP 295
GR +SDVWS+G+ L EL T GR P
Sbjct: 178 YGRFTIKSDVWSFGILLTELTTKGRVP 204
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 17/207 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVK 149
V +G+G FG V+ G + VA+K L E ++ E + + H+ LV+
Sbjct: 24 VKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
L +++ +V EYM GS+ +L + L + +A A G+AY+ E
Sbjct: 78 LYAVVSEEP-----IYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-E 131
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 269
M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 132 RMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAAL 188
Query: 270 TGRLAARSDVWSYGVFLYELIT-GRRP 295
GR +SDVWS+G+ L EL T GR P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 123/291 (42%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY K S K +A+K QL + G + EV
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 64 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 120 L------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 166
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
A+ GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 167 AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-- 224
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 225 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 123/291 (42%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY K S K +A+K QL + G + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 61 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 117 L------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 163
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 164 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-- 221
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 222 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 124/291 (42%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY K S K +A+K QL + G + EV
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 62 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K++DFG + PS T +S
Sbjct: 118 L------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS 168
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 169 ----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-- 222
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 223 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 257
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 123/291 (42%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY K S K +A+K QL + G + EV
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 64 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 120 L------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 166
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 167 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-- 224
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 225 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 123/291 (42%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY K S K +A+K QL + G + EV
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 66 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 122 L------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 168
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 169 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-- 226
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 227 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 261
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 17/207 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVK 149
V +G+G FG V+ G + VA+K L E ++ E + + H+ LV+
Sbjct: 24 VKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
L +++ +V EYM GS+ +L + L + +A A G+AY+ E
Sbjct: 78 LYAVVSEEP-----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-E 131
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 269
M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 132 RMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAAL 188
Query: 270 TGRLAARSDVWSYGVFLYELIT-GRRP 295
GR +SDVWS+G+ L EL T GR P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 123/291 (42%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY K S K +A+K QL + G + EV
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVEHQLRREVE 64
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 65 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 120
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 121 L------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 167
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 168 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-- 225
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 226 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 260
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 123/291 (42%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY K S K +A+K QL + G + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 61 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 117 L------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 163
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
A+ GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 164 AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-- 221
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 222 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLVG 152
+GEG +G VYK + K + VA+KQ+ +E + E++ + + ++VK G
Sbjct: 37 LGEGSYGSVYKAIHKETGQI-----VAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYG 91
Query: 153 -YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
Y + D +V EY GSV + +++T LT I Q +GL YLH
Sbjct: 92 SYFKNTD-----LWIVMEYCGAGSVSDIIRLRNKT-LTEDEIATILQSTLKGLEYLHF-- 143
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
+ I RD K+ NILL+ + +AKL+DFG+A G V+GT + APE +Q
Sbjct: 144 -MRKIHRDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPFWMAPEVIQEI 200
Query: 272 RLAARSDVWSYGVFLYELITGRRP 295
+D+WS G+ E+ G+ P
Sbjct: 201 GYNCVADIWSLGITAIEMAEGKPP 224
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 108/208 (51%), Gaps = 23/208 (11%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFL---GIVEHQNLV 148
V+G G FG V+KG + E S K+ V +K + + G + + + + G ++H ++V
Sbjct: 20 VLGSGVFGTVHKG-VWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETILTWAMRLKIAQDAARG 203
+L+G C G LV +Y+P GS+ ++ + + +L W +++ A+G
Sbjct: 79 RLLGLCP-----GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKG 127
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYA 263
+ YL E ++ R+ + N+LL +++DFG+A L P + + + + +
Sbjct: 128 MYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWM 184
Query: 264 APEYVQTGRLAARSDVWSYGVFLYELIT 291
A E + G+ +SDVWSYGV ++EL+T
Sbjct: 185 ALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVK 149
V +G+G FG V+ G + VA+K L E ++ E + + H+ LV+
Sbjct: 21 VKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 74
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
L +++ +V EYM GS+ +L ++ L + ++ A G+AY+ E
Sbjct: 75 LYAVVSEEP-----IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYV-E 128
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 269
M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 129 RMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAAL 185
Query: 270 TGRLAARSDVWSYGVFLYELIT-GRRP 295
GR +SDVWS+G+ L EL T GR P
Sbjct: 186 YGRFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 125/282 (44%), Gaps = 38/282 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWM----TEVNFLGIVEHQNLV 148
IG G FG VYKG +VAVK L + + EV L H N++
Sbjct: 36 IGSGSFGTVYKG--------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 87
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
+GY Q +V ++ S+ +L ET + IA+ A+G+ YLH
Sbjct: 88 LFMGYSTKP-----QLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLH 141
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 268
II RD KS+NI L E K+ DFGLA +H + G++ + APE +
Sbjct: 142 AK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 198
Query: 269 QT---GRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLS-DAKQFRQI 324
+ + +SDV+++G+ LYEL+TG+ P N +Q + + YLS D + R
Sbjct: 199 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSKVRSN 257
Query: 325 VDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMV 366
++ RL+++ CL K RP ++L +
Sbjct: 258 CPKAMK-----RLMAE-------CLKKKRDERPLFPQILASI 287
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 123/291 (42%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY K S K +A+K QL + G + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 61 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 117 L------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 163
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 164 TXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-- 221
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 222 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 17/207 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVK 149
V +G+G FG V+ G + VA+K L E ++ E + + H+ LV+
Sbjct: 14 VKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 67
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
L +++ +V EYM GS+ +L ++ L + +A A G+AY+ E
Sbjct: 68 LYAVVSEEP-----IXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-E 121
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 269
M++ + RD +++NIL+ E K++DFGLARL T A + + APE
Sbjct: 122 RMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF-PIKWTAPEAAL 178
Query: 270 TGRLAARSDVWSYGVFLYELIT-GRRP 295
GR +SDVWS+G+ L EL T GR P
Sbjct: 179 YGRFTIKSDVWSFGILLTELTTKGRVP 205
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 116/235 (49%), Gaps = 21/235 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG-GHKEWMTEVNFLGIVEHQNLVKLV 151
+G G FG V G + D VA+K + E++ E + + H+ LV+L
Sbjct: 12 LGTGQFGVVKYGKWRGQYD------VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 65
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C +R I ++ EYM NG + YL T + L++ +D + YL
Sbjct: 66 GVCTK--QRPI--FIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLESK- 119
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
Q + RD + N L+++Q K+SDFGL+R + +T S + ++ PE +
Sbjct: 120 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMYS 176
Query: 272 RLAARSDVWSYGVFLYELIT-GRRPIDR--NRPRSEQ--KLLQWVKPYLSDAKQF 321
+ +++SD+W++GV ++E+ + G+ P +R N +E + L+ +P+L+ K +
Sbjct: 177 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVY 231
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH--KEWMTEVNFLGIVEHQNLVKL 150
+G G FG V+ G NS +VAVK L + G + ++ E N + ++H LV+L
Sbjct: 20 LGAGQFGEVWMGYYNNS------TKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRL 72
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
Y E I ++ E+M GS+ +L + + + A G+AY+
Sbjct: 73 --YAVVTKEEPI--YIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 128
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 270
I RD +++N+L+ E K++DFGLAR+ +T A + + APE +
Sbjct: 129 ---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINF 184
Query: 271 GRLAARSDVWSYGVFLYELIT-GRRP 295
G +S+VWS+G+ LYE++T G+ P
Sbjct: 185 GCFTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 114/215 (53%), Gaps = 17/215 (7%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR---RGGHKEWMTEVNFLGIVEHQNL 147
+ +G G FG V +G+ + + ++++VA+K L + + +E M E + +++ +
Sbjct: 16 IELGCGNFGSVRQGVYRMRK---KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYI 72
Query: 148 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 207
V+L+G C + +LV E G + ++L K E I + ++ + G+ YL
Sbjct: 73 VRLIGVCQAE-----ALMLVMEMAGGGPLHKFLVGKREEIPV-SNVAELLHQVSMGMKYL 126
Query: 208 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAAPE 266
E + RD + N+LL + AK+SDFGL++ LG + + +A + + APE
Sbjct: 127 EEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE 183
Query: 267 YVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNR 300
+ + ++RSDVWSYGV ++E ++ G++P + +
Sbjct: 184 CINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK 218
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 125/282 (44%), Gaps = 38/282 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWM----TEVNFLGIVEHQNLV 148
IG G FG VYKG +VAVK L + + EV L H N++
Sbjct: 44 IGSGSFGTVYKG--------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
+GY Q +V ++ S+ +L ET + IA+ A+G+ YLH
Sbjct: 96 LFMGYSTKP-----QLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLH 149
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 268
II RD KS+NI L E K+ DFGLA +H + G++ + APE +
Sbjct: 150 AK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 206
Query: 269 QT---GRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLS-DAKQFRQI 324
+ + +SDV+++G+ LYEL+TG+ P N +Q + + YLS D + R
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSKVRSN 265
Query: 325 VDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMV 366
++ RL+++ CL K RP ++L +
Sbjct: 266 CPKAMK-----RLMAE-------CLKKKRDERPLFPQILASI 295
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 73 KEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE 131
K +I++LK KN + +G G FG VY+G + + ++VAVK L ++
Sbjct: 32 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQD 91
Query: 132 ---WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS-----PK 183
++ E + HQN+V+ +G + + R ++ E M G + +L P
Sbjct: 92 ELDFLMEALIISKFNHQNIVRCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPS 147
Query: 184 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGL 240
+ L L +A+D A G YL E I RD + N LL AK+ DFG+
Sbjct: 148 QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 204
Query: 241 ARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRN 299
AR + + + + PE G +++D WS+GV L+E+ + G P
Sbjct: 205 ARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 263
Query: 300 RPRSEQKLLQWV 311
+S Q++L++V
Sbjct: 264 --KSNQEVLEFV 273
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 102/207 (49%), Gaps = 17/207 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVK 149
V +G+G FG V+ G + VA+K L E ++ E + + H+ LV+
Sbjct: 191 VKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQ 244
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
L +++ +V EYM GS+ +L + L + +A A G+AY+ E
Sbjct: 245 LYAVVSEEP-----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-E 298
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 269
M++ + RD +++NIL+ E K++DFGL RL +T A + + APE
Sbjct: 299 RMNY--VHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKF-PIKWTAPEAAL 355
Query: 270 TGRLAARSDVWSYGVFLYELIT-GRRP 295
GR +SDVWS+G+ L EL T GR P
Sbjct: 356 YGRFTIKSDVWSFGILLTELTTKGRVP 382
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 125/282 (44%), Gaps = 38/282 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWM----TEVNFLGIVEHQNLV 148
IG G FG VYKG +VAVK L + + EV L H N++
Sbjct: 16 IGSGSFGTVYKG--------KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
+GY Q +V ++ S+ +L ET + IA+ A+G+ YLH
Sbjct: 68 LFMGYSTKP-----QLAIVTQWCEGSSLYHHLH-IIETKFEMIKLIDIARQTAQGMDYLH 121
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 268
II RD KS+NI L E K+ DFGLA +H + G++ + APE +
Sbjct: 122 AK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 269 QT---GRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLS-DAKQFRQI 324
+ + +SDV+++G+ LYEL+TG+ P N +Q + + YLS D + R
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS-NINNRDQIIFMVGRGYLSPDLSKVRSN 237
Query: 325 VDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMV 366
++ RL+++ CL K RP ++L +
Sbjct: 238 CPKAMK-----RLMAE-------CLKKKRDERPLFPQILASI 267
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 15/205 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH-KEWMTEVNFLGIVEHQNLVKLV 151
+G G +G VY G+ K + VAVK L +E++ E + ++H NLV+L+
Sbjct: 40 LGGGQYGEVYVGVWKK-----YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 94
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C + I V EYMP G++ YL + +T + L +A + + YL +
Sbjct: 95 GVCTLEPPFYI----VTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKK- 149
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 150 --NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYN 206
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+ +SDVW++GV L+E+ T G P
Sbjct: 207 TFSIKSDVWAFGVLLWEIATYGMSP 231
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 123/291 (42%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY K S K +A+K QL + G + EV
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 63 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 118
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K+++FG + PS
Sbjct: 119 L------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR----R 165
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 166 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-- 223
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 224 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 258
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 128/284 (45%), Gaps = 32/284 (11%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH-KEWMTEVNFLGIVEHQNLVKLV 151
+G G FG VY+G+ K + VAVK L +E++ E + ++H NLV+L+
Sbjct: 19 LGGGQFGEVYEGVWKK-----YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C R ++ E+M G++ YL + ++ + L +A + + YL +
Sbjct: 74 GVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK- 128
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD + N L+ E K++DFGL+RL + T + A + + APE +
Sbjct: 129 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF-PIKWTAPESLAYN 185
Query: 272 RLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRLE 330
+ + +SDVW++GV L+E+ T G P P +LL+ K +R R E
Sbjct: 186 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE---------KDYRM---ERPE 233
Query: 331 GKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDASA 374
G K+ + C N RP +E+ + + S+
Sbjct: 234 G-----CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 272
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 111/222 (50%), Gaps = 36/222 (16%)
Query: 93 IGEGGFGCVYKG-LIKNSEDPSQKVEVAVKQL--GRRGGH-------KEWMTEVNFLGIV 142
IG+GGFG V+KG L+K+ K VA+K L G G +E+ EV + +
Sbjct: 27 IGKGGFGLVHKGRLVKD------KSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 143 EHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAAR 202
H N+VKL G + +V E++P G + L K+ I W+++L++ D A
Sbjct: 81 NHPNIVKLYGLMHNPPR------MVMEFVPCGDLYHRLLDKAHPI-KWSVKLRLMLDIAL 133
Query: 203 GLAYLHEGMDFQIIVRDFKSSNILL---DEQWN--AKLSDFGLARLGPSEGFTHVSTAVV 257
G+ Y+ + + I+ RD +S NI L DE AK++DFG S+ H + ++
Sbjct: 134 GIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGT-----SQQSVHSVSGLL 187
Query: 258 GTMGYAAPEYV--QTGRLAARSDVWSYGVFLYELITGRRPID 297
G + APE + + ++D +S+ + LY ++TG P D
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 111/222 (50%), Gaps = 36/222 (16%)
Query: 93 IGEGGFGCVYKG-LIKNSEDPSQKVEVAVKQL--GRRGGH-------KEWMTEVNFLGIV 142
IG+GGFG V+KG L+K+ K VA+K L G G +E+ EV + +
Sbjct: 27 IGKGGFGLVHKGRLVKD------KSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 143 EHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAAR 202
H N+VKL G + +V E++P G + L K+ I W+++L++ D A
Sbjct: 81 NHPNIVKLYGLMHNPPR------MVMEFVPCGDLYHRLLDKAHPI-KWSVKLRLMLDIAL 133
Query: 203 GLAYLHEGMDFQIIVRDFKSSNILL---DEQWN--AKLSDFGLARLGPSEGFTHVSTAVV 257
G+ Y+ + + I+ RD +S NI L DE AK++DF L S+ H + ++
Sbjct: 134 GIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSL-----SQQSVHSVSGLL 187
Query: 258 GTMGYAAPEYV--QTGRLAARSDVWSYGVFLYELITGRRPID 297
G + APE + + ++D +S+ + LY ++TG P D
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 124/291 (42%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY + + +K +A+K QL + G + EV
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYL-----AREKQRKFILALKVLFKAQLEKAGVEHQLRREVE 57
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 58 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 113
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 114 L------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 160
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 161 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-- 218
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 219 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 253
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 17/207 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVK 149
V +G+G FG V+ G + VA+K L E ++ E + + H+ LV+
Sbjct: 24 VKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
L +++ +V EYM GS+ +L + L + +A A G+AY+ E
Sbjct: 78 LYAVVSEEP-----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-E 131
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 269
M++ + RD ++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 132 RMNY--VHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAAL 188
Query: 270 TGRLAARSDVWSYGVFLYELIT-GRRP 295
GR +SDVWS+G+ L EL T GR P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVK 149
V +G+G FG V+ G + VA+K L E ++ E + + H+ LV+
Sbjct: 21 VKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 74
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
L +++ +V EYM GS+ +L ++ L + ++ A G+AY+ E
Sbjct: 75 LYAVVSEEP-----IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYV-E 128
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 269
M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 129 RMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKF-PIKWTAPEAAL 185
Query: 270 TGRLAARSDVWSYGVFLYELIT-GRRP 295
GR +SDVWS+G+ L EL T GR P
Sbjct: 186 YGRFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 116/235 (49%), Gaps = 21/235 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG-GHKEWMTEVNFLGIVEHQNLVKLV 151
+G G FG V G + D VA+K + E++ E + + H+ LV+L
Sbjct: 16 LGTGQFGVVKYGKWRGQYD------VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 69
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C +R I ++ EYM NG + YL T + L++ +D + YL
Sbjct: 70 GVCTK--QRPI--FIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLESK- 123
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
Q + RD + N L+++Q K+SDFGL+R + +T S + ++ PE +
Sbjct: 124 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMYS 180
Query: 272 RLAARSDVWSYGVFLYELIT-GRRPIDR--NRPRSEQ--KLLQWVKPYLSDAKQF 321
+ +++SD+W++GV ++E+ + G+ P +R N +E + L+ +P+L+ K +
Sbjct: 181 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVY 235
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 122/291 (41%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY K S K +A+K QL + G + EV
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 62 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 118 L------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 164
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
+ GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 165 DTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-- 222
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 223 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 257
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 122/291 (41%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY K S K +A+K QL + G + EV
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 87 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 142
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 143 L------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 189
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
+ GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 190 DDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-- 247
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 248 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 282
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 102/207 (49%), Gaps = 17/207 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVK 149
V +G+G FG V+ G + VA+K L E ++ E + + H+ LV+
Sbjct: 24 VKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
L +++ +V EYM G + +L + L + +A A G+AY+ E
Sbjct: 78 LYAVVSEEP-----IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-E 131
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 269
M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 132 RMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAAL 188
Query: 270 TGRLAARSDVWSYGVFLYELIT-GRRP 295
GR +SDVWS+G+ L EL T GR P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 121/291 (41%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY K S K +A+K QL + G + EV
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G V + L S + T+
Sbjct: 66 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITE 121
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 122 L------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 168
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
+ GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 169 XXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-- 226
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 227 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 261
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 122/291 (41%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY K S K +A+K QL + G + EV
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 63 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 118
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 119 L------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 165
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
+ GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 166 XXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-- 223
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 224 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 258
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 116/235 (49%), Gaps = 21/235 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG-GHKEWMTEVNFLGIVEHQNLVKLV 151
+G G FG V G + D VA+K + E++ E + + H+ LV+L
Sbjct: 32 LGTGQFGVVKYGKWRGQYD------VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 85
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C +R I ++ EYM NG + YL T + L++ +D + YL
Sbjct: 86 GVCTK--QRPI--FIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLESK- 139
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
Q + RD + N L+++Q K+SDFGL+R + +T S + ++ PE +
Sbjct: 140 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMYS 196
Query: 272 RLAARSDVWSYGVFLYELIT-GRRPIDR--NRPRSEQ--KLLQWVKPYLSDAKQF 321
+ +++SD+W++GV ++E+ + G+ P +R N +E + L+ +P+L+ K +
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVY 251
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 116/235 (49%), Gaps = 21/235 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG-GHKEWMTEVNFLGIVEHQNLVKLV 151
+G G FG V G + D VA+K + E++ E + + H+ LV+L
Sbjct: 17 LGTGQFGVVKYGKWRGQYD------VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 70
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C +R I ++ EYM NG + YL T + L++ +D + YL
Sbjct: 71 GVCTK--QRPI--FIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLESK- 124
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
Q + RD + N L+++Q K+SDFGL+R + +T S + ++ PE +
Sbjct: 125 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMYS 181
Query: 272 RLAARSDVWSYGVFLYELIT-GRRPIDR--NRPRSEQ--KLLQWVKPYLSDAKQF 321
+ +++SD+W++GV ++E+ + G+ P +R N +E + L+ +P+L+ K +
Sbjct: 182 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVY 236
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 114/252 (45%), Gaps = 23/252 (9%)
Query: 73 KEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE 131
K +I++LK KN + +G G FG VY+G + + ++VAVK L ++
Sbjct: 18 KTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQD 77
Query: 132 ---WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS-----PK 183
++ E + HQN+V+ +G + + R ++ E M G + +L P
Sbjct: 78 ELDFLMEALIISKFNHQNIVRCIGVSL----QSLPRFILLELMAGGDLKSFLRETRPRPS 133
Query: 184 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGL 240
+ L L +A+D A G YL E I RD + N LL AK+ DFG+
Sbjct: 134 QPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGM 190
Query: 241 ARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRN 299
A+ + + + + PE G +++D WS+GV L+E+ + G P
Sbjct: 191 AQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS- 249
Query: 300 RPRSEQKLLQWV 311
+S Q++L++V
Sbjct: 250 --KSNQEVLEFV 259
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 17/227 (7%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTE 135
+I + K ++R IG+G G VY + D + EVA++Q+ + K+ +
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGASGTVYTAM-----DVATGQEVAIRQMNLQQQPKKELII 65
Query: 136 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
L + E++N +V Y D G + +V EY+ GS+ ++ ET +
Sbjct: 66 NEILVMRENKN-PNIVNYL-DSYLVGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAA 120
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGL-ARLGPSEGFTHVST 254
+ ++ + L +LH Q+I RD KS NILL + KL+DFG A++ P + +
Sbjct: 121 VCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---KRS 174
Query: 255 AVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
+VGT + APE V + D+WS G+ E+I G P P
Sbjct: 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP 221
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 102/207 (49%), Gaps = 17/207 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVK 149
V +G+G FG V+ G + VA+K L E ++ E + + H+ LV+
Sbjct: 24 VKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
L +++ +V EYM G + +L + L + +A A G+AY+ E
Sbjct: 78 LYAVVSEEP-----IYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-E 131
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 269
M++ + RD +++NIL+ E K++DFGLARL +T A + + APE
Sbjct: 132 RMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF-PIKWTAPEAAL 188
Query: 270 TGRLAARSDVWSYGVFLYELIT-GRRP 295
GR +SDVWS+G+ L EL T GR P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 17/207 (8%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVK 149
V +G+G FG V+ G + VA+K L E ++ E + + H+ LV+
Sbjct: 24 VKLGQGCFGEVWMGTWNGT------TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
L +++ +V EYM GS+ +L + L + +A A G+AY+ E
Sbjct: 78 LYAVVSEEP-----IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-E 131
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 269
M++ + RD +++NIL+ E K++DFGLARL T A + + APE
Sbjct: 132 RMNY--VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKF-PIKWTAPEAAL 188
Query: 270 TGRLAARSDVWSYGVFLYELIT-GRRP 295
GR +SDVWS+G+ L EL T GR P
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 123/291 (42%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY K S K +A+K QL + G + EV
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 64 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K+++FG + PS
Sbjct: 120 L------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR----R 166
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
T + GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 167 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-- 224
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 225 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 17/227 (7%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTE 135
+I + K ++R IG+G G VY + D + EVA++Q+ + K+ +
Sbjct: 12 SIVSVGDPKKKYTRFEKIGQGASGTVYTAM-----DVATGQEVAIRQMNLQQQPKKELII 66
Query: 136 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
L + E++N +V Y D G + +V EY+ GS+ ++ ET +
Sbjct: 67 NEILVMRENKN-PNIVNYL-DSYLVGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAA 121
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGL-ARLGPSEGFTHVST 254
+ ++ + L +LH Q+I RD KS NILL + KL+DFG A++ P + +
Sbjct: 122 VCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---KRS 175
Query: 255 AVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
+VGT + APE V + D+WS G+ E+I G P P
Sbjct: 176 XMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP 222
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 17/227 (7%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTE 135
+I + K ++R IG+G G VY + D + EVA++Q+ + K+ +
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGASGTVYTAM-----DVATGQEVAIRQMNLQQQPKKELII 65
Query: 136 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
L + E++N +V Y D G + +V EY+ GS+ ++ ET +
Sbjct: 66 NEILVMRENKN-PNIVNYL-DSYLVGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAA 120
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGL-ARLGPSEGFTHVST 254
+ ++ + L +LH Q+I RD KS NILL + KL+DFG A++ P + +
Sbjct: 121 VCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---KRS 174
Query: 255 AVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
+VGT + APE V + D+WS G+ E+I G P P
Sbjct: 175 XMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP 221
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 105/226 (46%), Gaps = 28/226 (12%)
Query: 77 IAELKSATKNFSRSVVIGEGGFGCVYK------GLIKNSEDPSQKVEVAVKQLGRRGGHK 130
+ ELK +F R +G G G V K GLI + +++ A++
Sbjct: 10 VGELKD--DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRN-------- 59
Query: 131 EWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
+ + E+ L +V G D E I E+M GS+DQ L K +
Sbjct: 60 QIIRELQVLHECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSLDQVL--KEAKRIPE 113
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
+ K++ RGLAYL E QI+ RD K SNIL++ + KL DFG++ +
Sbjct: 114 EILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLID 167
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
++ + VGT Y APE +Q + +SD+WS G+ L EL GR PI
Sbjct: 168 SMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 17/227 (7%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTE 135
+I + K ++R IG+G G VY + D + EVA++Q+ + K+ +
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGASGTVYTAM-----DVATGQEVAIRQMNLQQQPKKELII 65
Query: 136 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
L + E++N +V Y D G + +V EY+ GS+ ++ ET +
Sbjct: 66 NEILVMRENKN-PNIVNYL-DSYLVGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAA 120
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGL-ARLGPSEGFTHVST 254
+ ++ + L +LH Q+I RD KS NILL + KL+DFG A++ P + +
Sbjct: 121 VCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---KRS 174
Query: 255 AVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
+VGT + APE V + D+WS G+ E+I G P P
Sbjct: 175 EMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP 221
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 128/284 (45%), Gaps = 32/284 (11%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH-KEWMTEVNFLGIVEHQNLVKLV 151
+G G +G VY+G+ K + VAVK L +E++ E + ++H NLV+L+
Sbjct: 19 LGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 73
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C R ++ E+M G++ YL + ++ + L +A + + YL +
Sbjct: 74 GVCT----REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK- 128
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD + N L+ E K++DFGL+RL + T + A + + APE +
Sbjct: 129 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF-PIKWTAPESLAYN 185
Query: 272 RLAARSDVWSYGVFLYELIT-GRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRLE 330
+ + +SDVW++GV L+E+ T G P P +LL+ K +R R E
Sbjct: 186 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE---------KDYRM---ERPE 233
Query: 331 GKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDASA 374
G K+ + C N RP +E+ + + S+
Sbjct: 234 G-----CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 272
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 114/215 (53%), Gaps = 17/215 (7%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR---RGGHKEWMTEVNFLGIVEHQNL 147
+ +G G FG V +G+ + + ++++VA+K L + + +E M E + +++ +
Sbjct: 342 IELGCGNFGSVRQGVYRMRK---KQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYI 398
Query: 148 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 207
V+L+G C + +LV E G + ++L K E I + ++ + G+ YL
Sbjct: 399 VRLIGVCQAE-----ALMLVMEMAGGGPLHKFLVGKREEIPVSNVA-ELLHQVSMGMKYL 452
Query: 208 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAAPE 266
E + R+ + N+LL + AK+SDFGL++ LG + + +A + + APE
Sbjct: 453 EEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE 509
Query: 267 YVQTGRLAARSDVWSYGVFLYELIT-GRRPIDRNR 300
+ + ++RSDVWSYGV ++E ++ G++P + +
Sbjct: 510 CINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK 544
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 116/235 (49%), Gaps = 21/235 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG-GHKEWMTEVNFLGIVEHQNLVKLV 151
+G G FG V G + D VA+K + E++ E + + H+ LV+L
Sbjct: 23 LGTGQFGVVKYGKWRGQYD------VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 76
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C +R I ++ EYM NG + YL T + L++ +D + YL
Sbjct: 77 GVCTK--QRPI--FIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLESK- 130
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
Q + RD + N L+++Q K+SDFGL+R + +T S + ++ PE +
Sbjct: 131 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMYS 187
Query: 272 RLAARSDVWSYGVFLYELIT-GRRPIDR--NRPRSEQ--KLLQWVKPYLSDAKQF 321
+ +++SD+W++GV ++E+ + G+ P +R N +E + L+ +P+L+ K +
Sbjct: 188 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVY 242
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 116/235 (49%), Gaps = 21/235 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG-GHKEWMTEVNFLGIVEHQNLVKLV 151
+G G FG V G + D VA+K + E++ E + + H+ LV+L
Sbjct: 17 LGTGQFGVVKYGKWRGQYD------VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 70
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C +R I ++ EYM NG + YL T + L++ +D + YL
Sbjct: 71 GVCTK--QRPI--FIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLESK- 124
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
Q + RD + N L+++Q K+SDFGL+R + +T S + ++ PE +
Sbjct: 125 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SRGSKFPVRWSPPEVLMYS 181
Query: 272 RLAARSDVWSYGVFLYELIT-GRRPIDR--NRPRSEQ--KLLQWVKPYLSDAKQF 321
+ +++SD+W++GV ++E+ + G+ P +R N +E + L+ +P+L+ K +
Sbjct: 182 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVY 236
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 122/291 (41%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY K S K +A+K QL + G + EV
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 64 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 120 L------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 166
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
+ GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 167 XXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-- 224
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 225 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 104/219 (47%), Gaps = 26/219 (11%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMT-----EVNFLG 140
N+ +GEG FG V K + + +VA+K + ++ K M E+++L
Sbjct: 15 NYQIVKTLGEGSFGKV-----KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLR 69
Query: 141 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
++ H +++KL DE ++V EY N D Y+ + + A R Q
Sbjct: 70 LLRHPHIIKLYDVIKSKDEI----IMVIEYAGNELFD-YIVQRDKMSEQEARRF--FQQI 122
Query: 201 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTM 260
+ Y H +I+ RD K N+LLDE N K++DFGL+ + F S G+
Sbjct: 123 ISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSP 176
Query: 261 GYAAPEYVQTGRLAA--RSDVWSYGVFLYELITGRRPID 297
YAAPE V +G+L A DVWS GV LY ++ R P D
Sbjct: 177 NYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 122/291 (41%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY K S K +A+K QL + G + EV
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 61 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 117 L------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 163
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
+ GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 164 XXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-- 221
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 222 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 256
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 104/219 (47%), Gaps = 26/219 (11%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMT-----EVNFLG 140
N+ +GEG FG V K + + +VA+K + ++ K M E+++L
Sbjct: 5 NYQIVKTLGEGSFGKV-----KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLR 59
Query: 141 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
++ H +++KL DE ++V EY N D Y+ + + A R Q
Sbjct: 60 LLRHPHIIKLYDVIKSKDEI----IMVIEYAGNELFD-YIVQRDKMSEQEARRF--FQQI 112
Query: 201 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTM 260
+ Y H +I+ RD K N+LLDE N K++DFGL+ + F S G+
Sbjct: 113 ISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSP 166
Query: 261 GYAAPEYVQTGRLAA--RSDVWSYGVFLYELITGRRPID 297
YAAPE V +G+L A DVWS GV LY ++ R P D
Sbjct: 167 NYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 104/219 (47%), Gaps = 26/219 (11%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMT-----EVNFLG 140
N+ +GEG FG V K + + +VA+K + ++ K M E+++L
Sbjct: 14 NYQIVKTLGEGSFGKV-----KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLR 68
Query: 141 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
++ H +++KL DE ++V EY N D Y+ + + A R Q
Sbjct: 69 LLRHPHIIKLYDVIKSKDEI----IMVIEYAGNELFD-YIVQRDKMSEQEARRF--FQQI 121
Query: 201 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTM 260
+ Y H +I+ RD K N+LLDE N K++DFGL+ + F S G+
Sbjct: 122 ISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSP 175
Query: 261 GYAAPEYVQTGRLAA--RSDVWSYGVFLYELITGRRPID 297
YAAPE V +G+L A DVWS GV LY ++ R P D
Sbjct: 176 NYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 115/222 (51%), Gaps = 27/222 (12%)
Query: 82 SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL---GRRGGHKEWMTEVNF 138
S++ F + +G G + VYKGL K + V VA+K++ G + E++
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTT-----GVYVALKEVKLDSEEGTPSTAIREISL 56
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
+ ++H+N+V+L ++ + LV+E+M N + +Y+ ++ + L + +
Sbjct: 57 MKELKHENIVRLYDVIHTEN----KLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVK 111
Query: 199 ----DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHV 252
+GLA+ HE +I+ RD K N+L++++ KL DFGLAR G P F
Sbjct: 112 YFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTF--- 165
Query: 253 STAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
S+ VV T+ Y AP+ + R + S D+WS G L E+ITG+
Sbjct: 166 SSEVV-TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 100/205 (48%), Gaps = 17/205 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVKLV 151
+G G FG V+ G + +VA+K L E ++ E + ++H LV+L
Sbjct: 17 LGNGQFGEVWMGTWNGN------TKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLY 70
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
+++ +V EYM GS+ +L L + +A A G+AY+ E M
Sbjct: 71 AVVSEEP-----IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYI-ERM 124
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
++ I RD +S+NIL+ K++DFGLARL T A + + APE G
Sbjct: 125 NY--IHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKF-PIKWTAPEAALYG 181
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
R +SDVWS+G+ L EL+T GR P
Sbjct: 182 RFTIKSDVWSFGILLTELVTKGRVP 206
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 104/205 (50%), Gaps = 15/205 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH-KEWMTEVNFLGIVEHQNLVKLV 151
+G G +G VY+G+ K + VAVK L +E++ E + ++H NLV+L+
Sbjct: 26 LGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C R ++ E+M G++ YL + ++ + L +A + + YL +
Sbjct: 81 GVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK- 135
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 136 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYN 192
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+ + +SDVW++GV L+E+ T G P
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 15/205 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH-KEWMTEVNFLGIVEHQNLVKLV 151
+G G +G VY+G+ K + VAVK L +E++ E + ++H NLV+L+
Sbjct: 26 LGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C R ++ E+M G++ YL + + + L +A + + YL +
Sbjct: 81 GVCT----REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK- 135
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 136 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYN 192
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+ + +SDVW++GV L+E+ T G P
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 104/205 (50%), Gaps = 15/205 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH-KEWMTEVNFLGIVEHQNLVKLV 151
+G G +G VY+G+ K + VAVK L +E++ E + ++H NLV+L+
Sbjct: 21 LGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C R ++ E+M G++ YL + ++ + L +A + + YL +
Sbjct: 76 GVCT----REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK- 130
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 131 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYN 187
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+ + +SDVW++GV L+E+ T G P
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 104/205 (50%), Gaps = 15/205 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH-KEWMTEVNFLGIVEHQNLVKLV 151
+G G +G VY+G+ K + VAVK L +E++ E + ++H NLV+L+
Sbjct: 21 LGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C R ++ E+M G++ YL + ++ + L +A + + YL +
Sbjct: 76 GVCT----REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK- 130
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 131 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYN 187
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+ + +SDVW++GV L+E+ T G P
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 104/219 (47%), Gaps = 26/219 (11%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMT-----EVNFLG 140
N+ +GEG FG V K + + +VA+K + ++ K M E+++L
Sbjct: 9 NYQIVKTLGEGSFGKV-----KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLR 63
Query: 141 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
++ H +++KL DE ++V EY N D Y+ + + A R Q
Sbjct: 64 LLRHPHIIKLYDVIKSKDEI----IMVIEYAGNELFD-YIVQRDKMSEQEARRF--FQQI 116
Query: 201 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTM 260
+ Y H +I+ RD K N+LLDE N K++DFGL+ + F S G+
Sbjct: 117 ISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSP 170
Query: 261 GYAAPEYVQTGRLAA--RSDVWSYGVFLYELITGRRPID 297
YAAPE V +G+L A DVWS GV LY ++ R P D
Sbjct: 171 NYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 122/291 (41%), Gaps = 49/291 (16%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVN 137
A ++F +G+G FG VY K S K +A+K QL + G + EV
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQS-----KFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMR 193
+ H N+++L GY D + L+ EY P G+V + L S + T+
Sbjct: 64 IQSHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
L A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 120 L------ANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----R 166
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
+ GT+ Y PE ++ + D+WS GV YE + G+ P + N + K + V
Sbjct: 167 DDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-- 224
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
+ P + + L+S+L L N RP + EVLE
Sbjct: 225 ---------EFTFPDFVTEGARDLISRL-------LKHNPSQRPMLREVLE 259
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 118/238 (49%), Gaps = 27/238 (11%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG-GHKEWMTEVNFLGIVEHQNLVKLV 151
+G G FG V G + D VA+K + E++ E + + H+ LV+L
Sbjct: 32 LGTGQFGVVKYGKWRGQYD------VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLY 85
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C +R I ++ EYM NG + YL T + L++ +D + YL
Sbjct: 86 GVCTK--QRPI--FIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLESK- 139
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT---MGYAAPEYV 268
Q + RD + N L+++Q K+SDFGL+R + T+ VG+ + ++ PE +
Sbjct: 140 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE----ETSSVGSKFPVRWSPPEVL 193
Query: 269 QTGRLAARSDVWSYGVFLYELIT-GRRPIDR--NRPRSEQ--KLLQWVKPYLSDAKQF 321
+ +++SD+W++GV ++E+ + G+ P +R N +E + L+ +P+L+ K +
Sbjct: 194 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVY 251
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 102/229 (44%), Gaps = 33/229 (14%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGG---HKEWMTEVNFLGIVEHQNLVK 149
IGEG FG V++ VAVK L ++ E + ++ N+VK
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYL---SPKS-------------------ETI 187
L+G CA G L++EYM G ++++L SP +
Sbjct: 115 LLGVCA----VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170
Query: 188 LTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 247
L+ A +L IA+ A G+AYL E + + RD + N L+ E K++DFGL+R S
Sbjct: 171 LSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 227
Query: 248 GFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
+ + + PE + R SDVW+YGV L+E+ + G +P
Sbjct: 228 DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 276
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 104/205 (50%), Gaps = 15/205 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH-KEWMTEVNFLGIVEHQNLVKLV 151
+G G +G VY+G+ K + VAVK L +E++ E + ++H NLV+L+
Sbjct: 21 LGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C R ++ E+M G++ YL + ++ + L +A + + YL +
Sbjct: 76 GVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK- 130
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 131 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYN 187
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+ + +SDVW++GV L+E+ T G P
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 15/205 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH-KEWMTEVNFLGIVEHQNLVKLV 151
+G G +G VY+G+ K + VAVK L +E++ E + ++H NLV+L+
Sbjct: 26 LGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C R ++ E+M G++ YL + + + L +A + + YL +
Sbjct: 81 GVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK- 135
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 136 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYN 192
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+ + +SDVW++GV L+E+ T G P
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 104/205 (50%), Gaps = 15/205 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH-KEWMTEVNFLGIVEHQNLVKLV 151
+G G +G VY+G+ K + VAVK L +E++ E + ++H NLV+L+
Sbjct: 21 LGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C R ++ E+M G++ YL + ++ + L +A + + YL +
Sbjct: 76 GVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK- 130
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 131 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYN 187
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+ + +SDVW++GV L+E+ T G P
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 15/205 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH-KEWMTEVNFLGIVEHQNLVKLV 151
+G G +G VY+G+ K + VAVK L +E++ E + ++H NLV+L+
Sbjct: 22 LGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C R ++ E+M G++ YL + + + L +A + + YL +
Sbjct: 77 GVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK- 131
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 132 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKF-PIKWTAPESLAYN 188
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+ + +SDVW++GV L+E+ T G P
Sbjct: 189 KFSIKSDVWAFGVLLWEIATYGMSP 213
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 15/205 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH-KEWMTEVNFLGIVEHQNLVKLV 151
+G G +G VY+G+ K + VAVK L +E++ E + ++H NLV+L+
Sbjct: 23 LGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C R ++ E+M G++ YL + + + L +A + + YL +
Sbjct: 78 GVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK- 132
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 133 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKF-PIKWTAPESLAYN 189
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+ + +SDVW++GV L+E+ T G P
Sbjct: 190 KFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 15/205 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH-KEWMTEVNFLGIVEHQNLVKLV 151
+G G +G VY+G+ K + VAVK L +E++ E + ++H NLV+L+
Sbjct: 26 LGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C R ++ E+M G++ YL + + + L +A + + YL +
Sbjct: 81 GVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK- 135
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 136 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYN 192
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+ + +SDVW++GV L+E+ T G P
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 15/205 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH-KEWMTEVNFLGIVEHQNLVKLV 151
+G G +G VY+G+ K + VAVK L +E++ E + ++H NLV+L+
Sbjct: 25 LGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 79
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C R ++ E+M G++ YL + + + L +A + + YL +
Sbjct: 80 GVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK- 134
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 135 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYN 191
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+ + +SDVW++GV L+E+ T G P
Sbjct: 192 KFSIKSDVWAFGVLLWEIATYGMSP 216
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 106/226 (46%), Gaps = 17/226 (7%)
Query: 77 IAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEV 136
I + K ++R IG+G G VY + D + EVA++Q+ + K+ +
Sbjct: 13 IVSVGDPKKKYTRFEKIGQGASGTVYTAM-----DVATGQEVAIRQMNLQQQPKKELIIN 67
Query: 137 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI 196
L + E++N +V Y D G + +V EY+ GS+ ++ ET + +
Sbjct: 68 EILVMRENKN-PNIVNYL-DSYLVGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAV 122
Query: 197 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGL-ARLGPSEGFTHVSTA 255
++ + L +LH Q+I R+ KS NILL + KL+DFG A++ P + +
Sbjct: 123 CRECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQS---KRST 176
Query: 256 VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
+VGT + APE V + D+WS G+ E+I G P P
Sbjct: 177 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP 222
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 15/205 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH-KEWMTEVNFLGIVEHQNLVKLV 151
+G G +G VY+G+ K + VAVK L +E++ E + ++H NLV+L+
Sbjct: 23 LGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C R ++ E+M G++ YL + + + L +A + + YL +
Sbjct: 78 GVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK- 132
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 133 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYN 189
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+ + +SDVW++GV L+E+ T G P
Sbjct: 190 KFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 15/205 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH-KEWMTEVNFLGIVEHQNLVKLV 151
+G G +G VY+G+ K + VAVK L +E++ E + ++H NLV+L+
Sbjct: 34 LGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 88
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C R ++ E+M G++ YL + + + L +A + + YL +
Sbjct: 89 GVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK- 143
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 144 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYN 200
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+ + +SDVW++GV L+E+ T G P
Sbjct: 201 KFSIKSDVWAFGVLLWEIATYGMSP 225
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 47/282 (16%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKV--EVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKL 150
IGEG FG L+K++ED Q V E+ + ++ + +E EV L ++H N+V+
Sbjct: 32 IGEGSFGKAI--LVKSTEDGRQYVIKEINISRMSSKE-REESRREVAVLANMKHPNIVQ- 87
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK------SETILTWAMRLKIAQDAARGL 204
Y +E G +V +Y G + + ++ + + IL W +++ +A L
Sbjct: 88 --YRESFEENG-SLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA------L 138
Query: 205 AYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAA 264
++H D +I+ RD KS NI L + +L DFG+AR+ S ++ A +GT Y +
Sbjct: 139 KHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST--VELARACIGTPYYLS 193
Query: 265 PEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRS-EQKLLQWVKPYLSDAKQFRQ 323
PE + +SD+W+ G LYEL T + + ++ K++ P +S
Sbjct: 194 PEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVS------- 246
Query: 324 IVDPRLEGKYSLR-LVSKLSHVANLCLVKNARTRPKMSEVLE 364
L Y LR LVS+L +N R RP ++ +LE
Sbjct: 247 -----LHYSYDLRSLVSQL-------FKRNPRDRPSVNSILE 276
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 15/205 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH-KEWMTEVNFLGIVEHQNLVKLV 151
+G G +G VY+G+ K + VAVK L +E++ E + ++H NLV+L+
Sbjct: 23 LGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 77
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C R ++ E+M G++ YL + + + L +A + + YL +
Sbjct: 78 GVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK- 132
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 133 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYN 189
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+ + +SDVW++GV L+E+ T G P
Sbjct: 190 KFSIKSDVWAFGVLLWEIATYGMSP 214
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 104/214 (48%), Gaps = 29/214 (13%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR--RGGHKEWMTEVNFLGIVEHQNLVK 149
V+G+G FG IK + + +V V +K+L R + ++ EV + +EH N++K
Sbjct: 17 VLGKGCFG----QAIKVTHRETGEVMV-MKELIRFDEETQRTFLKEVKVMRCLEHPNVLK 71
Query: 150 LVGYCADDDERGIQRL-LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
+G D +RL + EY+ G++ + ++ W+ R+ A+D A G+AYLH
Sbjct: 72 FIGVLYKD-----KRLNFITEYIKGGTLRGIIK-SMDSQYPWSQRVSFAKDIASGMAYLH 125
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL-----GPSEGFTHVST-------AV 256
II RD S N L+ E N ++DFGLARL EG + V
Sbjct: 126 S---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTV 182
Query: 257 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI 290
VG + APE + + DV+S+G+ L E+I
Sbjct: 183 VGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 15/205 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH-KEWMTEVNFLGIVEHQNLVKLV 151
+G G +G VY+G+ K + VAVK L +E++ E + ++H NLV+L+
Sbjct: 21 LGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C R ++ E+M G++ YL + + + L +A + + YL +
Sbjct: 76 GVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK- 130
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 131 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYN 187
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+ + +SDVW++GV L+E+ T G P
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 120/283 (42%), Gaps = 41/283 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVE 143
F++ IG+G FG V+KG+ ++ +QKV VA+K + ++ E+ L +
Sbjct: 9 FTKLEKIGKGSFGEVFKGI----DNRTQKV-VAIKIIDLEEAEDEIEDIQQEITVLSQCD 63
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--SETILTWAMRLKIAQDAA 201
+ K G D + I + EY+ GS L P ET + +R +
Sbjct: 64 SPYVTKYYGSYLKDTKLWI----IMEYLGGGSALDLLEPGPLDETQIATILR-----EIL 114
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
+GL YLH + I RD K++N+LL E KL+DFG+A G VGT
Sbjct: 115 KGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPF 169
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQF 321
+ APE ++ +++D+WS G+ EL G P P L+ P
Sbjct: 170 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------- 221
Query: 322 RQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
P LEG YS L CL K RP E+L+
Sbjct: 222 -----PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 102/220 (46%), Gaps = 32/220 (14%)
Query: 96 GGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGI--VEHQNLVKLVGY 153
G FGCV+K + N VAVK + + W +E ++H+NL++ +
Sbjct: 26 GRFGCVWKAQLMNDF-------VAVKIFPLQD-KQSWQSEREIFSTPGMKHENLLQFIAA 77
Query: 154 CADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE---- 209
++ L+ + GS+ YL I+TW +A+ +RGL+YLHE
Sbjct: 78 EKRGSNLEVELWLITAFHDKGSLTDYLKG---NIITWNELCHVAETMSRGLSYLHEDVPW 134
Query: 210 ----GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA-RLGPSE--GFTHVSTAVVGTMGY 262
G I RDFKS N+LL A L+DFGLA R P + G TH VGT Y
Sbjct: 135 CRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTH---GQVGTRRY 191
Query: 263 AAPEYVQTG-----RLAARSDVWSYGVFLYELITGRRPID 297
APE ++ R D+++ G+ L+EL++ + D
Sbjct: 192 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 99/222 (44%), Gaps = 21/222 (9%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNF 138
AT + IG G +G VYK + DP VA+K + G G + EV
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYK-----ARDPHSGHFVALKSVRVPNGEEGLPISTVREVAL 56
Query: 139 L---GIVEHQNLVKLVGYCADD-DERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRL 194
L EH N+V+L+ CA +R I+ LV+E++ + + YL L
Sbjct: 57 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK 115
Query: 195 KIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVST 254
+ + RGL +LH I+ RD K NIL+ KL+DFGLAR+ +
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALA 169
Query: 255 AVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
VV T+ Y APE + A D+WS G E+ R+P+
Sbjct: 170 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 15/205 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH-KEWMTEVNFLGIVEHQNLVKLV 151
+G G +G VY+G+ K + VAVK L +E++ E + ++H NLV+L+
Sbjct: 21 LGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 75
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C R ++ E+M G++ YL + + + L +A + + YL +
Sbjct: 76 GVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK- 130
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 131 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYN 187
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+ + +SDVW++GV L+E+ T G P
Sbjct: 188 KFSIKSDVWAFGVLLWEIATYGMSP 212
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 132/288 (45%), Gaps = 40/288 (13%)
Query: 86 NFSRSVVIGEGGFGCVYK------GLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFL 139
+F + +G G G V+K GL+ + +++ A++ + + E+ L
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN--------QIIRELQVL 58
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
+V G D E I E+M GS+DQ L K + + K++
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSLDQVL--KKAGRIPEQILGKVSIA 112
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 259
+GL YL E +I+ RD K SNIL++ + KL DFG++ + ++ + VGT
Sbjct: 113 VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGT 166
Query: 260 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAK 319
Y +PE +Q + +SD+WS G+ L E+ GR PI P + K + +P ++ +
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI----PPPDAK--EDSRPPMAIFE 220
Query: 320 QFRQIVD---PRL-EGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 363
IV+ P+L G +SL + N CL+KN R + +++
Sbjct: 221 LLDYIVNEPPPKLPSGVFSL----EFQDFVNKCLIKNPAERADLKQLM 264
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 120/283 (42%), Gaps = 41/283 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVE 143
F++ IG+G FG V+KG+ ++ +QKV VA+K + ++ E+ L +
Sbjct: 29 FTKLEKIGKGSFGEVFKGI----DNRTQKV-VAIKIIDLEEAEDEIEDIQQEITVLSQCD 83
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--SETILTWAMRLKIAQDAA 201
+ K G D + I + EY+ GS L P ET + +R +
Sbjct: 84 SPYVTKYYGSYLKDTKLWI----IMEYLGGGSALDLLEPGPLDETQIATILR-----EIL 134
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
+GL YLH + I RD K++N+LL E KL+DFG+A G VGT
Sbjct: 135 KGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPF 189
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQF 321
+ APE ++ +++D+WS G+ EL G P P L+ P
Sbjct: 190 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------- 241
Query: 322 RQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
P LEG YS L CL K RP E+L+
Sbjct: 242 -----PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 275
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 120/283 (42%), Gaps = 41/283 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVE 143
F++ IG+G FG V+KG+ ++ +QKV VA+K + ++ E+ L +
Sbjct: 9 FTKLEKIGKGSFGEVFKGI----DNRTQKV-VAIKIIDLEEAEDEIEDIQQEITVLSQCD 63
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--SETILTWAMRLKIAQDAA 201
+ K G D + I + EY+ GS L P ET + +R +
Sbjct: 64 SPYVTKYYGSYLKDTKLWI----IMEYLGGGSALDLLEPGPLDETQIATILR-----EIL 114
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
+GL YLH + I RD K++N+LL E KL+DFG+A G VGT
Sbjct: 115 KGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPF 169
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQF 321
+ APE ++ +++D+WS G+ EL G P P L+ P
Sbjct: 170 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------- 221
Query: 322 RQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
P LEG YS L CL K RP E+L+
Sbjct: 222 -----PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 120/283 (42%), Gaps = 41/283 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVE 143
F++ IG+G FG V+KG+ ++ +QKV VA+K + ++ E+ L +
Sbjct: 24 FTKLEKIGKGSFGEVFKGI----DNRTQKV-VAIKIIDLEEAEDEIEDIQQEITVLSQCD 78
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--SETILTWAMRLKIAQDAA 201
+ K G D + I + EY+ GS L P ET + +R +
Sbjct: 79 SPYVTKYYGSYLKDTKLWI----IMEYLGGGSALDLLEPGPLDETQIATILR-----EIL 129
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
+GL YLH + I RD K++N+LL E KL+DFG+A G VGT
Sbjct: 130 KGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPF 184
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQF 321
+ APE ++ +++D+WS G+ EL G P P L+ P
Sbjct: 185 WMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------- 236
Query: 322 RQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
P LEG YS L CL K RP E+L+
Sbjct: 237 -----PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 270
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-----GRRGGHKEWMTEVNFLGIVEHQNL 147
+G GG VY +ED ++VA+K + + K + EV+ + HQN+
Sbjct: 19 LGGGGMSTVYL-----AEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNI 73
Query: 148 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 207
V ++ D DE LV EY+ ++ +Y+ +S L+ + G+ +
Sbjct: 74 VSMI----DVDEEDDCYYLVMEYIEGPTLSEYI--ESHGPLSVDTAINFTNQILDGIKHA 127
Query: 208 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEY 267
H D +I+ RD K NIL+D K+ DFG+A+ T + V+GT+ Y +PE
Sbjct: 128 H---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGTVQYFSPEQ 183
Query: 268 VQTGRLAARSDVWSYGVFLYELITGRRPID 297
+ +D++S G+ LYE++ G P +
Sbjct: 184 AKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 108/231 (46%), Gaps = 19/231 (8%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQ-KVEVAVKQLGRRGGHKEWMT-EVNF 138
K + ++F +G G FG V+ LI++ + ++V K++ R E E
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVH--LIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLM 59
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
L IV H ++++ G D Q ++ +Y+ G + L KS+ + A
Sbjct: 60 LSIVTHPFIIRMWGTFQD----AQQIFMIMDYIEGGELFSLLR-KSQRFPNPVAKF-YAA 113
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVG 258
+ L YLH II RD K NILLD+ + K++DFG A+ P V+ + G
Sbjct: 114 EVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLCG 165
Query: 259 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPRSEQKLL 308
T Y APE V T D WS+G+ +YE++ G P D N ++ +K+L
Sbjct: 166 TPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKIL 216
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 99/222 (44%), Gaps = 21/222 (9%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNF 138
AT + IG G +G VYK + DP VA+K + G G + EV
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYK-----ARDPHSGHFVALKSVRVPNGEEGLPISTVREVAL 56
Query: 139 L---GIVEHQNLVKLVGYCADD-DERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRL 194
L EH N+V+L+ CA +R I+ LV+E++ + + YL L
Sbjct: 57 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK 115
Query: 195 KIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVST 254
+ + RGL +LH I+ RD K NIL+ KL+DFGLAR+ +
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALD 169
Query: 255 AVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
VV T+ Y APE + A D+WS G E+ R+P+
Sbjct: 170 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 99/222 (44%), Gaps = 21/222 (9%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNF 138
AT + IG G +G VYK + DP VA+K + G G + EV
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYK-----ARDPHSGHFVALKSVRVPNGEEGLPISTVREVAL 56
Query: 139 L---GIVEHQNLVKLVGYCADD-DERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRL 194
L EH N+V+L+ CA +R I+ LV+E++ + + YL L
Sbjct: 57 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK 115
Query: 195 KIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVST 254
+ + RGL +LH I+ RD K NIL+ KL+DFGLAR+ +
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALF 169
Query: 255 AVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
VV T+ Y APE + A D+WS G E+ R+P+
Sbjct: 170 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 104/200 (52%), Gaps = 14/200 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH-KEWMTEVNFLGIVEHQNLVKLV 151
+G G +G VY+G+ K + VAVK L +E++ E + ++H NLV+L+
Sbjct: 228 LGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 282
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C R ++ E+M G++ YL + ++ + L +A + + YL E
Sbjct: 283 GVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKK 337
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
+F I R+ + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 338 NF--IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYN 394
Query: 272 RLAARSDVWSYGVFLYELIT 291
+ + +SDVW++GV L+E+ T
Sbjct: 395 KFSIKSDVWAFGVLLWEIAT 414
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 136/302 (45%), Gaps = 38/302 (12%)
Query: 75 FTIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK---E 131
F E + A + + S +G+G FG VY+G+ K + VA+K + + E
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 65
Query: 132 WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQY---LSPKSET-- 186
++ E + + ++V+L+G + +G L++ E M G + Y L P+ E
Sbjct: 66 FLNEASVMKEFNCHHVVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 121
Query: 187 IL---TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL 243
+L + + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 122 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 178
Query: 244 GPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRS 303
+ + + + +PE ++ G SDVWS+GV L+E+ T +
Sbjct: 179 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LA 228
Query: 304 EQKLLQWVKPY--LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSE 361
EQ PY LS+ + R +++ L K L + +C N + RP E
Sbjct: 229 EQ-------PYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLE 280
Query: 362 VL 363
++
Sbjct: 281 II 282
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 106/223 (47%), Gaps = 23/223 (10%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-----RGGHKEWMTE 135
K+ +F V+G+G FG V+ L++ P A+K L + R + M E
Sbjct: 24 KADPSHFELLKVLGQGSFGKVF--LVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKM-E 80
Query: 136 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
+ L V H +VKL + A E + L+ +++ G + LS E + T
Sbjct: 81 RDILADVNHPFVVKL--HYAFQTEGKL--YLILDFLRGGDLFTRLS--KEVMFTEEDVKF 134
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTA 255
+ A GL +LH II RD K NILLDE+ + KL+DFGL++ E H A
Sbjct: 135 YLAELALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK----EAIDHEKKA 187
Query: 256 --VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
GT+ Y APE V + +D WSYGV ++E++TG P
Sbjct: 188 YSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 119/283 (42%), Gaps = 41/283 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVE 143
F++ IG+G FG VYKG+ D K VA+K + ++ E+ L +
Sbjct: 21 FTKLDRIGKGSFGEVYKGI-----DNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCD 75
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--SETILTWAMRLKIAQDAA 201
+ + G + + ++ EY+ GS L P ET + +R +
Sbjct: 76 SPYITRYFGSYL----KSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILR-----EIL 126
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
+GL YLH + I RD K++N+LL EQ + KL+DFG+A G VGT
Sbjct: 127 KGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPF 181
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQF 321
+ APE ++ ++D+WS G+ EL G P P L+ P
Sbjct: 182 WMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP-------- 233
Query: 322 RQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
P LEG++S CL K+ R RP E+L+
Sbjct: 234 -----PTLEGQHS----KPFKEFVEACLNKDPRFRPTAKELLK 267
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG-GHKEWMTEVNFLGIVEHQNLVKLV 151
+G G FG V G K D VAVK + E+ E + + H LVK
Sbjct: 16 LGSGQFGVVKLGKWKGQYD------VAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFY 69
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C+ + +V EY+ NG + YL + L + L++ D G+A+L
Sbjct: 70 GVCSKE----YPIYIVTEYISNGCLLNYLRSHGKG-LEPSQLLEMCYDVCEGMAFLE--- 121
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT---MGYAAPEYV 268
Q I RD + N L+D K+SDFG+ R + + + VGT + ++APE
Sbjct: 122 SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV----SSVGTKFPVKWSAPEVF 177
Query: 269 QTGRLAARSDVWSYGVFLYELIT-GRRPID 297
+ +++SDVW++G+ ++E+ + G+ P D
Sbjct: 178 HYFKYSSKSDVWAFGILMWEVFSLGKMPYD 207
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 104/213 (48%), Gaps = 32/213 (15%)
Query: 93 IGEGGFG----CVYKGLIKNSEDPSQKVEVAVKQLGRRGG--HKEWMTEVNFLGIVEHQN 146
+G+G FG C Y L N+ VAVKQL G +++ E+ L +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNT-----GALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 72
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 206
+VK G + ++ LV EY+P+G + +L R + DA+R L Y
Sbjct: 73 IVKYRGVSYGPGRQSLR--LVMEYLPSGCLRDFLQ-----------RHRARLDASRLLLY 119
Query: 207 ---LHEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLARLGP-SEGFTHVSTAVVG 258
+ +GM++ + + RD + NIL++ + + K++DFGLA+L P + + V
Sbjct: 120 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS 179
Query: 259 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+ + APE + + +SDVWS+GV LYEL T
Sbjct: 180 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH-KEWMTEVNFLGIVEHQNLVKLV 151
+G G +G VY+G+ K + VAVK L +E++ E + ++H NLV+L+
Sbjct: 22 LGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 76
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C R ++ E+M G++ YL + + + L +A + + YL +
Sbjct: 77 GVCT----REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK- 131
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD + N L+ E K++DFGL+RL + T + A + + APE +
Sbjct: 132 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF-PIKWTAPESLAYN 188
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+ + +SDVW++GV L+E+ T G P
Sbjct: 189 KFSIKSDVWAFGVLLWEIATYGMSP 213
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 34/219 (15%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH--KEWMTEVNFLGIVEHQNLV 148
VV+G+G +G VY G D S +V +A+K++ R + E+ ++H+N+V
Sbjct: 28 VVLGKGTYGIVYAG-----RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIV 82
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-------SETILTWAMRLKIAQDAA 201
+ +G + E G ++ + E +P GS+ L K +TI + ++
Sbjct: 83 QYLGSFS---ENGFIKIFM-EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQI------L 132
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLA-RLGPSEGFTHVSTAVVGT 259
GL YLH D QI+ RD K N+L++ K+SDFG + RL G + GT
Sbjct: 133 EGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA---GINPCTETFTGT 186
Query: 260 MGYAAPEYVQTGR--LAARSDVWSYGVFLYELITGRRPI 296
+ Y APE + G +D+WS G + E+ TG+ P
Sbjct: 187 LQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 16/209 (7%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR---GGHKEWMTEVNFLGIVEHQNLV 148
++GEG FG VY+G+ N + +K+ VAVK + +++M+E + ++H ++V
Sbjct: 31 ILGEGFFGEVYEGVYTNHK--GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
KL+G ++ ++ E P G + YL ++ + L Q + +AYL
Sbjct: 89 KLIGIIEEE-----PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ-ICKAMAYLE 142
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 268
+ RD NIL+ KL DFGL+R E + S + + + +PE +
Sbjct: 143 S---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL-PIKWMSPESI 198
Query: 269 QTGRLAARSDVWSYGVFLYELIT-GRRPI 296
R SDVW + V ++E+++ G++P
Sbjct: 199 NFRRFTTASDVWMFAVCMWEILSFGKQPF 227
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 16/209 (7%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR---GGHKEWMTEVNFLGIVEHQNLV 148
++GEG FG VY+G+ N + +K+ VAVK + +++M+E + ++H ++V
Sbjct: 15 ILGEGFFGEVYEGVYTNHK--GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
KL+G ++ ++ E P G + YL ++ + L Q + +AYL
Sbjct: 73 KLIGIIEEE-----PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ-ICKAMAYLE 126
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 268
+ RD NIL+ KL DFGL+R E + S + + + +PE +
Sbjct: 127 S---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL-PIKWMSPESI 182
Query: 269 QTGRLAARSDVWSYGVFLYELIT-GRRPI 296
R SDVW + V ++E+++ G++P
Sbjct: 183 NFRRFTTASDVWMFAVCMWEILSFGKQPF 211
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 104/213 (48%), Gaps = 32/213 (15%)
Query: 93 IGEGGFG----CVYKGLIKNSEDPSQKVEVAVKQLGRRGG--HKEWMTEVNFLGIVEHQN 146
+G+G FG C Y L N+ VAVKQL G +++ E+ L +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNT-----GALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 73
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 206
+VK G + ++ LV EY+P+G + +L R + DA+R L Y
Sbjct: 74 IVKYRGVSYGPGRQSLR--LVMEYLPSGCLRDFLQ-----------RHRARLDASRLLLY 120
Query: 207 ---LHEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLARLGP-SEGFTHVSTAVVG 258
+ +GM++ + + RD + NIL++ + + K++DFGLA+L P + + V
Sbjct: 121 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS 180
Query: 259 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+ + APE + + +SDVWS+GV LYEL T
Sbjct: 181 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 16/209 (7%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR---GGHKEWMTEVNFLGIVEHQNLV 148
++GEG FG VY+G+ N + +K+ VAVK + +++M+E + ++H ++V
Sbjct: 19 ILGEGFFGEVYEGVYTNHK--GEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
KL+G ++ ++ E P G + YL ++ + L Q + +AYL
Sbjct: 77 KLIGIIEEE-----PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ-ICKAMAYLE 130
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 268
+ RD NIL+ KL DFGL+R E + S + + + +PE +
Sbjct: 131 S---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL-PIKWMSPESI 186
Query: 269 QTGRLAARSDVWSYGVFLYELIT-GRRPI 296
R SDVW + V ++E+++ G++P
Sbjct: 187 NFRRFTTASDVWMFAVCMWEILSFGKQPF 215
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH-KEWMTEVNFLGIVEHQNLVKLV 151
+G G +G VY+G+ K + VAVK L +E++ E + ++H NLV+L+
Sbjct: 26 LGGGQYGEVYEGVWKK-----YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 80
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C R ++ E+M G++ YL + + + L +A + + YL +
Sbjct: 81 GVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK- 135
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD + N L+ E K++DFGL+RL + T + A + + APE +
Sbjct: 136 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF-PIKWTAPESLAYN 192
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+ + +SDVW++GV L+E+ T G P
Sbjct: 193 KFSIKSDVWAFGVLLWEIATYGMSP 217
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 104/213 (48%), Gaps = 32/213 (15%)
Query: 93 IGEGGFG----CVYKGLIKNSEDPSQKVEVAVKQLGRRGG--HKEWMTEVNFLGIVEHQN 146
+G+G FG C Y L N+ VAVKQL G +++ E+ L +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNT-----GALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 85
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 206
+VK G + ++ LV EY+P+G + +L R + DA+R L Y
Sbjct: 86 IVKYRGVSYGPGRQSLR--LVMEYLPSGCLRDFLQ-----------RHRARLDASRLLLY 132
Query: 207 ---LHEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLARLGP-SEGFTHVSTAVVG 258
+ +GM++ + + RD + NIL++ + + K++DFGLA+L P + + V
Sbjct: 133 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQS 192
Query: 259 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+ + APE + + +SDVWS+GV LYEL T
Sbjct: 193 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 97/215 (45%), Gaps = 25/215 (11%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK-----EWMTEVNFLGIVEHQNL 147
+G G FG V G E KV AVK L R+ + E+ L + H ++
Sbjct: 24 LGVGTFGKVKVG---KHELTGHKV--AVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHI 78
Query: 148 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 207
+KL + + +V EY+ G + Y+ + RL Q G+ Y
Sbjct: 79 IKLYQVISTPSDI----FMVMEYVSGGELFDYICKNGRLDEKESRRL--FQQILSGVDYC 132
Query: 208 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEY 267
H M ++ RD K N+LLD NAK++DFGL+ + F S G+ YAAPE
Sbjct: 133 HRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPEV 186
Query: 268 VQTGRLAA--RSDVWSYGVFLYELITGRRPIDRNR 300
+ +GRL A D+WS GV LY L+ G P D +
Sbjct: 187 I-SGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH 220
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 14/200 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH-KEWMTEVNFLGIVEHQNLVKLV 151
+G G +G VY+G+ K + VAVK L +E++ E + ++H NLV+L+
Sbjct: 267 LGGGQYGEVYEGVWK-----KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 321
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C R ++ E+M G++ YL + + + L +A + + YL E
Sbjct: 322 GVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKK 376
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
+F I R+ + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 377 NF--IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYN 433
Query: 272 RLAARSDVWSYGVFLYELIT 291
+ + +SDVW++GV L+E+ T
Sbjct: 434 KFSIKSDVWAFGVLLWEIAT 453
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 135/298 (45%), Gaps = 38/298 (12%)
Query: 79 ELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK---EWMTE 135
E + A + + S +G+G FG VY+G+ K + VA+K + + E++ E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 136 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQY---LSPKSET--IL-- 188
+ + ++V+L+G + +G L++ E M G + Y L P+ E +L
Sbjct: 66 ASVMKEFNCHHVVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 121
Query: 189 -TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 247
+ + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 122 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 178
Query: 248 GFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 307
+ + + + +PE ++ G SDVWS+GV L+E+ T +EQ
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-- 226
Query: 308 LQWVKPY--LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 363
PY LS+ + R +++ L K L + +C N + RP E++
Sbjct: 227 -----PYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEII 278
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 135/298 (45%), Gaps = 38/298 (12%)
Query: 79 ELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK---EWMTE 135
E + A + + S +G+G FG VY+G+ K + VA+K + + E++ E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 136 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQY---LSPKSET--IL-- 188
+ + ++V+L+G + +G L++ E M G + Y L P+ E +L
Sbjct: 79 ASVMKEFNCHHVVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 134
Query: 189 -TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 247
+ + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 135 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 191
Query: 248 GFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 307
+ + + + +PE ++ G SDVWS+GV L+E+ T +EQ
Sbjct: 192 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-- 239
Query: 308 LQWVKPY--LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 363
PY LS+ + R +++ L K L + +C N + RP E++
Sbjct: 240 -----PYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 14/200 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH-KEWMTEVNFLGIVEHQNLVKLV 151
+G G +G VY+G+ K + VAVK L +E++ E + ++H NLV+L+
Sbjct: 225 LGGGQYGEVYEGVWK-----KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLL 279
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G C R ++ E+M G++ YL + + + L +A + + YL E
Sbjct: 280 GVCT----REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKK 334
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
+F I R+ + N L+ E K++DFGL+RL + +T + A + + APE +
Sbjct: 335 NF--IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF-PIKWTAPESLAYN 391
Query: 272 RLAARSDVWSYGVFLYELIT 291
+ + +SDVW++GV L+E+ T
Sbjct: 392 KFSIKSDVWAFGVLLWEIAT 411
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 109/250 (43%), Gaps = 37/250 (14%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGI--VEHQNLVK 149
V G FGCV+K + N + + KQ W E + ++H+N+++
Sbjct: 31 VKARGRFGCVWKAQLLNEYVAVKIFPIQDKQ--------SWQNEYEVYSLPGMKHENILQ 82
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
+G + L+ + GS+ +L +++W IA+ ARGLAYLHE
Sbjct: 83 FIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHE 139
Query: 210 -------GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA---RLGPSEGFTHVSTAVVGT 259
G I RD KS N+LL A ++DFGLA G S G TH VGT
Sbjct: 140 DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTH---GQVGT 196
Query: 260 MGYAAPEYVQTG-----RLAARSDVWSYGVFLYELIT----GRRPIDRNRPRSEQKLLQW 310
Y APE ++ R D+++ G+ L+EL + P+D E+++ Q
Sbjct: 197 RRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ- 255
Query: 311 VKPYLSDAKQ 320
P L D ++
Sbjct: 256 -HPSLEDMQE 264
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 131/284 (46%), Gaps = 24/284 (8%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVE 143
F++ IG+G FG V+KG+ ++ +Q+V VA+K + ++ E+ L +
Sbjct: 25 FTKLERIGKGSFGEVFKGI----DNRTQQV-VAIKIIDLEEAEDEIEDIQQEITVLSQCD 79
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARG 203
+ K G +G + ++ EY+ GS L A LK + +G
Sbjct: 80 SSYVTKYYGSYL----KGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK---EILKG 132
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYA 263
L YLH + I RD K++N+LL EQ + KL+DFG+A G VGT +
Sbjct: 133 LDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWM 187
Query: 264 APEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP--YLSD-AKQ 320
APE +Q +++D+WS G+ EL G P P L+ P + D K
Sbjct: 188 APEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKS 247
Query: 321 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
F++ +D L S R +K + + +VKN++ ++E+++
Sbjct: 248 FKEFIDACLNKDPSFRPTAK-ELLKHKFIVKNSKKTSYLTELID 290
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 135/298 (45%), Gaps = 38/298 (12%)
Query: 79 ELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK---EWMTE 135
E + A + + S +G+G FG VY+G+ K + VA+K + + E++ E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 136 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQY---LSPKSET--IL-- 188
+ + ++V+L+G + +G L++ E M G + Y L P+ E +L
Sbjct: 72 ASVMKEFNCHHVVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 127
Query: 189 -TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 247
+ + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 128 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 184
Query: 248 GFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 307
+ + + + +PE ++ G SDVWS+GV L+E+ T +EQ
Sbjct: 185 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-- 232
Query: 308 LQWVKPY--LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 363
PY LS+ + R +++ L K L + +C N + RP E++
Sbjct: 233 -----PYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 135/298 (45%), Gaps = 38/298 (12%)
Query: 79 ELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK---EWMTE 135
E + A + + S +G+G FG VY+G+ K + VA+K + + E++ E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 136 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQY---LSPKSET--IL-- 188
+ + ++V+L+G + +G L++ E M G + Y L P+ E +L
Sbjct: 72 ASVMKEFNCHHVVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 127
Query: 189 -TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 247
+ + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 128 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 184
Query: 248 GFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 307
+ + + + +PE ++ G SDVWS+GV L+E+ T +EQ
Sbjct: 185 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-- 232
Query: 308 LQWVKPY--LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 363
PY LS+ + R +++ L K L + +C N + RP E++
Sbjct: 233 -----PYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 107/237 (45%), Gaps = 19/237 (8%)
Query: 61 SYPSMSQRPSNLKEFTIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAV 120
S P MS +P E E+ + + +G G FG V+ ++ +VAV
Sbjct: 166 SVPCMSSKPQKPWEKDAWEIPRESLKLEKK--LGAGQFGEVWMATY------NKHTKVAV 217
Query: 121 KQLGRRGGHKE-WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQY 179
K + E ++ E N + ++H LVKL + ++ E+M GS+ +
Sbjct: 218 KTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE-----PIYIITEFMAKGSLLDF 272
Query: 180 LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 239
L + + + A G+A++ + I RD +++NIL+ K++DFG
Sbjct: 273 LKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFG 329
Query: 240 LARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
LAR+ +T A + + APE + G +SDVWS+G+ L E++T GR P
Sbjct: 330 LARVIEDNEYTAREGAKF-PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 385
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 137/303 (45%), Gaps = 38/303 (12%)
Query: 79 ELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK---EWMTE 135
E + A + + S +G+G FG VY+G+ K + VA+K + + E++ E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 136 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQY---LSPKSET--IL-- 188
+ + ++V+L+G + +G L++ E M G + Y L P+ E +L
Sbjct: 73 ASVMKEFNCHHVVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 128
Query: 189 -TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 247
+ + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 129 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 185
Query: 248 GFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 307
+ + + + +PE ++ G SDVWS+GV L+E+ T +EQ
Sbjct: 186 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-- 233
Query: 308 LQWVKPY--LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEM 365
PY LS+ + R +++ L K L + +C N + RP E++
Sbjct: 234 -----PYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISS 287
Query: 366 VNK 368
+ +
Sbjct: 288 IKE 290
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 134/298 (44%), Gaps = 38/298 (12%)
Query: 79 ELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK---EWMTE 135
E + A + + S +G+G FG VY+G+ K + VA+K + + E++ E
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 136 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQY---LSPKSET--IL-- 188
+ + ++V+L+G + +G L++ E M G + Y L P+ E +L
Sbjct: 64 ASVMKEFNCHHVVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 119
Query: 189 -TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 247
+ + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 120 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET 176
Query: 248 GFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 307
+ + + +PE ++ G SDVWS+GV L+E+ T +EQ
Sbjct: 177 DXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-- 224
Query: 308 LQWVKPY--LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 363
PY LS+ + R +++ L K L + +C N + RP E++
Sbjct: 225 -----PYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLLELMRMCWQYNPKMRPSFLEII 276
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 34/219 (15%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH--KEWMTEVNFLGIVEHQNLV 148
VV+G+G +G VY G D S +V +A+K++ R + E+ ++H+N+V
Sbjct: 14 VVLGKGTYGIVYAG-----RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIV 68
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK-------SETILTWAMRLKIAQDAA 201
+ +G + E G ++ + E +P GS+ L K +TI + ++
Sbjct: 69 QYLGSFS---ENGFIKIFM-EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQI------L 118
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLA-RLGPSEGFTHVSTAVVGT 259
GL YLH D QI+ RD K N+L++ K+SDFG + RL G + GT
Sbjct: 119 EGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA---GINPCTETFTGT 172
Query: 260 MGYAAPEYVQTGR--LAARSDVWSYGVFLYELITGRRPI 296
+ Y APE + G +D+WS G + E+ TG+ P
Sbjct: 173 LQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 107/233 (45%), Gaps = 33/233 (14%)
Query: 77 IAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR-----RGGHKE 131
I L+ +++ VIG G FG V L+++ SQKV A+K L + R
Sbjct: 67 IRGLQMKAEDYDVVKVIGRGAFGEVQ--LVRHK--ASQKV-YAMKLLSKFEMIKRSDSAF 121
Query: 132 WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWA 191
+ E + + +V+L +CA D++ + +V EYMP G + +S + WA
Sbjct: 122 FWEERDIMAFANSPWVVQL--FCAFQDDKYL--YMVMEYMPGGDLVNLMS-NYDVPEKWA 176
Query: 192 ----MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 247
+ +A DA + +H RD K N+LLD+ + KL+DFG
Sbjct: 177 KFYTAEVVLALDAIHSMGLIH---------RDVKPDNMLLDKHGHLKLADFGTCMKMDET 227
Query: 248 GFTHVSTAVVGTMGYAAPEYVQT----GRLAARSDVWSYGVFLYELITGRRPI 296
G H TA VGT Y +PE +++ G D WS GVFL+E++ G P
Sbjct: 228 GMVHCDTA-VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 134/298 (44%), Gaps = 38/298 (12%)
Query: 79 ELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK---EWMTE 135
E + A + + S +G+G FG VY+G+ K + VA+K + + E++ E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 136 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQY---LSPKSET--IL-- 188
+ + ++V+L+G + +G L++ E M G + Y L P+ E +L
Sbjct: 73 ASVMKEFNCHHVVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 128
Query: 189 -TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 247
+ + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 129 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXET 185
Query: 248 GFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 307
+ + + +PE ++ G SDVWS+GV L+E+ T +EQ
Sbjct: 186 DXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-- 233
Query: 308 LQWVKPY--LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 363
PY LS+ + R +++ L K L + +C N + RP E++
Sbjct: 234 -----PYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 135/298 (45%), Gaps = 38/298 (12%)
Query: 79 ELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK---EWMTE 135
E + A + + S +G+G FG VY+G+ K + VA+K + + E++ E
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 100
Query: 136 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQY---LSPKSET--IL-- 188
+ + ++V+L+G + +G L++ E M G + Y L P+ E +L
Sbjct: 101 ASVMKEFNCHHVVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 156
Query: 189 -TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 247
+ + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 157 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 213
Query: 248 GFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 307
+ + + + +PE ++ G SDVWS+GV L+E+ T +EQ
Sbjct: 214 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-- 261
Query: 308 LQWVKPY--LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 363
PY LS+ + R +++ L K L + +C N + RP E++
Sbjct: 262 -----PYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEII 313
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 95/213 (44%), Gaps = 12/213 (5%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEW-MTEVNFLGIVEH 144
NF V+G+G FG V +K + D V+V K + + E MTE L + +
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKETGD-LYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 204
+ + C +R V E++ G + ++ KS R A + L
Sbjct: 83 HPFLTQLFCCFQTPDR---LFFVMEFVNGGDLMFHIQ-KSRRFDEARARF-YAAEIISAL 137
Query: 205 AYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAA 264
+LH D II RD K N+LLD + + KL+DFG+ + G G T + GT Y A
Sbjct: 138 MFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TATFCGTPDYIA 192
Query: 265 PEYVQTGRLAARSDVWSYGVFLYELITGRRPID 297
PE +Q D W+ GV LYE++ G P +
Sbjct: 193 PEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 16/207 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLVG 152
+GEG FG V ++ ++ + L + H E+++L ++ H +++KL
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 153 YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMD 212
+ ++V EY G + Y+ K +T + Q + Y H
Sbjct: 77 VITTPTDI----VMVIEY-AGGELFDYIVEKKR--MTEDEGRRFFQQIICAIEYCHR--- 126
Query: 213 FQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGR 272
+I+ RD K N+LLD+ N K++DFGL+ + F S G+ YAAPE V G+
Sbjct: 127 HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VINGK 182
Query: 273 LAA--RSDVWSYGVFLYELITGRRPID 297
L A DVWS G+ LY ++ GR P D
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 134/298 (44%), Gaps = 38/298 (12%)
Query: 79 ELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK---EWMTE 135
E + A + + S +G+G FG VY+G+ K + VA+K + + E++ E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 136 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETIL-- 188
+ + ++V+L+G + +G L++ E M G + YL + + +L
Sbjct: 79 ASVMKEFNCHHVVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP 134
Query: 189 -TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 247
+ + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 135 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 191
Query: 248 GFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 307
+ + + + +PE ++ G SDVWS+GV L+E+ T +EQ
Sbjct: 192 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-- 239
Query: 308 LQWVKPY--LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 363
PY LS+ + R +++ L K L + +C N + RP E++
Sbjct: 240 -----PYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 105/237 (44%), Gaps = 29/237 (12%)
Query: 61 SYPSMSQRPSNLKEFTIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAV 120
S P MS +P E E+ + + +G G FG V+ ++ +VAV
Sbjct: 160 SVPCMSSKPQKPWEKDAWEIPRESLKLEKK--LGAGQFGEVWMATY------NKHTKVAV 211
Query: 121 KQLGRRGGHKE-WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQY 179
K + E ++ E N + ++H LVKL + ++ E+M GS+ +
Sbjct: 212 KTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE-----PIYIITEFMAKGSLLDF 266
Query: 180 LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 239
L + + + A G+A++ + I RD +++NIL+ K++DFG
Sbjct: 267 LKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFG 323
Query: 240 LARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
LAR+G + + APE + G +SDVWS+G+ L E++T GR P
Sbjct: 324 LARVGAK-----------FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 369
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 134/298 (44%), Gaps = 38/298 (12%)
Query: 79 ELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK---EWMTE 135
E + A + + S +G+G FG VY+G+ K + VA+K + + E++ E
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 68
Query: 136 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYL-----SPKSETIL-- 188
+ + ++V+L+G + +G L++ E M G + YL + + +L
Sbjct: 69 ASVMKEFNCHHVVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP 124
Query: 189 -TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 247
+ + +++A + A G+AYL+ + + RD + N ++ E + K+ DFG+ R
Sbjct: 125 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 181
Query: 248 GFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 307
+ + + + +PE ++ G SDVWS+GV L+E+ T +EQ
Sbjct: 182 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-- 229
Query: 308 LQWVKPY--LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 363
PY LS+ + R +++ L K L + +C N + RP E++
Sbjct: 230 -----PYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEII 281
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 98/222 (44%), Gaps = 31/222 (13%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVNFL 139
++F +G+G FG VY + S K +A+K QL + G + EV
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQS-----KFILALKVLFKTQLEKAGVEHQLRREVEIQ 66
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMRLK 195
+ H N+++L GY D + L+ EY P G+V + L S + T+ L
Sbjct: 67 SHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL- 121
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTA 255
A L+Y H ++I RD K N+LL K++DFG + PS T
Sbjct: 122 -----ANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR----RTT 169
Query: 256 VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 297
+ GT+ Y PE ++ + D+WS GV YE + G P +
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 130/297 (43%), Gaps = 48/297 (16%)
Query: 77 IAELKSATKNFSRSVVIGEGGFGCVYK------GLIKNSEDPSQKVEVAVKQLGRRGGHK 130
+ ELK +F + +G G G V+K GL+ + +++ A++
Sbjct: 19 VGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-------- 68
Query: 131 EWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS---ETI 187
+ + E+ L +V G D E I E+M GS+DQ L E I
Sbjct: 69 QIIRELQVLHECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSLDQVLKKAGRIPEQI 124
Query: 188 LTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 247
L K++ +GL YL E +I+ RD K SNIL++ + KL DFG++ +
Sbjct: 125 LG-----KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQ 173
Query: 248 GFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 307
++ + VGT Y +PE +Q + +SD+WS G+ L E+ GR PI +
Sbjct: 174 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSG--SGSMAI 231
Query: 308 LQWVKPYLSDAKQFRQIVDPRL-EGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 363
+ + +++ P+L G +SL + N CL+KN R + +++
Sbjct: 232 FELLDYIVNEPP-------PKLPSGVFSL----EFQDFVNKCLIKNPAERADLKQLM 277
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 95/212 (44%), Gaps = 25/212 (11%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK-----EWMTEVNFLGIVEHQNL 147
+G G FG V K E +VAVK L R+ + E+ L + H ++
Sbjct: 19 LGVGTFGKV-----KIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHI 73
Query: 148 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 207
+KL + + +V EY+ G + Y+ A RL Q + Y
Sbjct: 74 IKLYQVISTPTDF----FMVMEYVSGGELFDYICKHGRVEEMEARRL--FQQILSAVDYC 127
Query: 208 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEY 267
H M ++ RD K N+LLD NAK++DFGL+ + F S G+ YAAPE
Sbjct: 128 HRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPE- 180
Query: 268 VQTGRLAA--RSDVWSYGVFLYELITGRRPID 297
V +GRL A D+WS GV LY L+ G P D
Sbjct: 181 VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 134/298 (44%), Gaps = 38/298 (12%)
Query: 79 ELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK---EWMTE 135
E + A + + S +G+G FG VY+G+ K + VA+K + + E++ E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 136 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQY---LSPKSET--IL-- 188
+ + ++V+L+G + +G L++ E M G + Y L P+ E +L
Sbjct: 66 ASVMKEFNCHHVVRLLGVVS----QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 121
Query: 189 -TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 247
+ + +++A + A G+AYL+ + + RD + N + E + K+ DFG+ R
Sbjct: 122 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYET 178
Query: 248 GFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 307
+ + + + +PE ++ G SDVWS+GV L+E+ T +EQ
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-- 226
Query: 308 LQWVKPY--LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 363
PY LS+ + R +++ L K L + +C N + RP E++
Sbjct: 227 -----PYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLLELMRMCWQYNPKMRPSFLEII 278
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 142/328 (43%), Gaps = 50/328 (15%)
Query: 68 RPSNLKEFTIAEL---KSATKNFSRSVVIGEGGFGCVYKGL-IKNSEDPSQKVEVAVKQL 123
R +LK+ +AEL K FS IG G FG VY ++NSE VA+K++
Sbjct: 34 RAGSLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSE------VVAIKKM 87
Query: 124 GRRG--GHKEW---MTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQ 178
G +++W + EV FL + H N ++ G R LV EY + D
Sbjct: 88 SYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL----REHTAWLVMEYCLGSASDL 143
Query: 179 ---YLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKL 235
+ P E + + A +GLAYLH +I RD K+ NILL E KL
Sbjct: 144 LEVHKKPLQEVEIA-----AVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKL 195
Query: 236 SDFGLAR-LGPSEGFTHVSTAVVGTMGYAAPEYV---QTGRLAARSDVWSYGVFLYELIT 291
DFG A + P+ F VGT + APE + G+ + DVWS G+ EL
Sbjct: 196 GDFGSASIMAPANXF-------VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 248
Query: 292 GRRPI-DRNRPRSEQKLLQWVKPYLSD---AKQFRQIVDPRLEGKYSLRLVSKLSHVANL 347
+ P+ + N + + Q P L ++ FR VD L+ R S++
Sbjct: 249 RKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 308
Query: 348 CLVKNARTRPKMSEVLEMVNKIVDASAE 375
L R RP + +++++ + DA E
Sbjct: 309 VL----RERPP-TVIMDLIQRTKDAVRE 331
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 32/222 (14%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFLGIVEHQNLVK 149
+G GGFG V + + +++ + +VA+KQ + K W E+ + + H N+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGE-----QVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 77
Query: 150 LVGYCADDDERGIQRL-------LVYEYMPNGSVDQYLSPKSETI-LTWAMRLKIAQDAA 201
A + G+Q+L L EY G + +YL+ L + D +
Sbjct: 78 -----AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS 132
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLD---EQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 257
L YLHE +II RD K NI+L ++ K+ D G A+ L E + T V
Sbjct: 133 SALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE----LCTEFV 185
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRN 299
GT+ Y APE ++ + D WS+G +E ITG RP N
Sbjct: 186 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 227
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 32/222 (14%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFLGIVEHQNLVK 149
+G GGFG V + + +++ + +VA+KQ + K W E+ + + H N+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGE-----QVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 76
Query: 150 LVGYCADDDERGIQRL-------LVYEYMPNGSVDQYLSPKSETI-LTWAMRLKIAQDAA 201
A + G+Q+L L EY G + +YL+ L + D +
Sbjct: 77 -----AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS 131
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLD---EQWNAKLSDFGLAR-LGPSEGFTHVSTAVV 257
L YLHE +II RD K NI+L ++ K+ D G A+ L E + T V
Sbjct: 132 SALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE----LCTEFV 184
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRN 299
GT+ Y APE ++ + D WS+G +E ITG RP N
Sbjct: 185 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 226
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 32/213 (15%)
Query: 93 IGEGGFG----CVYKGLIKNSEDPSQKVEVAVKQLGRRGG--HKEWMTEVNFLGIVEHQN 146
+G+G FG C Y L N+ VAVKQL G +++ E+ L +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNT-----GALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 69
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 206
+VK G ++ LV EY+P+G + +L R + DA+R L Y
Sbjct: 70 IVKYRGVSYGPGRPELR--LVMEYLPSGCLRDFLQ-----------RHRARLDASRLLLY 116
Query: 207 ---LHEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLARLGP-SEGFTHVSTAVVG 258
+ +GM++ + + RD + NIL++ + + K++DFGLA+L P + V
Sbjct: 117 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQS 176
Query: 259 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+ + APE + + +SDVWS+GV LYEL T
Sbjct: 177 PIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 28/226 (12%)
Query: 77 IAELKSATKNFSRSVVIGEGGFGCVYK------GLIKNSEDPSQKVEVAVKQLGRRGGHK 130
+ ELK +F + +G G G V+K GL+ + +++ A++
Sbjct: 62 VGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-------- 111
Query: 131 EWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
+ + E+ L +V G D E I E+M GS+DQ L K +
Sbjct: 112 QIIRELQVLHECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSLDQVL--KKAGRIPE 165
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
+ K++ +GL YL E +I+ RD K SNIL++ + KL DFG++ +
Sbjct: 166 QILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLID 219
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
++ + VGT Y +PE +Q + +SD+WS G+ L E+ GR PI
Sbjct: 220 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 105/235 (44%), Gaps = 22/235 (9%)
Query: 80 LKSATKNFSRSVVIGEGGFGCVYKGL-IKNSEDPSQKVEVAVKQLGRRGGHKEWMTEV-- 136
L A + + IGEG +G V+K +KN V V Q G G + EV
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRV-QTGEEGMPLSTIREVAV 64
Query: 137 -NFLGIVEHQNLVKLVGYC-ADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRL 194
L EH N+V+L C +R + LV+E+ VDQ L+ + + +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEH-----VDQDLTTYLDKVPEPGVPT 119
Query: 195 KIAQDAA----RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
+ +D RGL +LH +++ RD K NIL+ KL+DFGLAR+ F
Sbjct: 120 ETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQ 173
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQ 305
T+VV T+ Y APE + A D+WS G E+ R+P+ R +Q
Sbjct: 174 MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQ 227
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 17/205 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLGIVEHQNLVKLV 151
+G G FG V+ ++ +VAVK + E ++ E N + ++H LVKL
Sbjct: 23 LGAGQFGEVWMATY------NKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLH 76
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
+ ++ E+M GS+ +L + + + A G+A++ +
Sbjct: 77 AVVTKE-----PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR- 130
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD +++NIL+ K++DFGLAR+ +T A + + APE + G
Sbjct: 131 --NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF-PIKWTAPEAINFG 187
Query: 272 RLAARSDVWSYGVFLYELIT-GRRP 295
+SDVWS+G+ L E++T GR P
Sbjct: 188 SFTIKSDVWSFGILLMEIVTYGRIP 212
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 103/228 (45%), Gaps = 23/228 (10%)
Query: 77 IAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEV 136
I +L+ +++ VIG G FG V K++ ++ ++ +R + E
Sbjct: 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 120
Query: 137 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWA----M 192
+ + +V+L + A D+R + +V EYMP G + +S + WA
Sbjct: 121 DIMAFANSPWVVQL--FYAFQDDRYL--YMVMEYMPGGDLVNLMS-NYDVPEKWARFYTA 175
Query: 193 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
+ +A DA + ++H RD K N+LLD+ + KL+DFG EG
Sbjct: 176 EVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 226
Query: 253 STAVVGTMGYAAPEYVQT----GRLAARSDVWSYGVFLYELITGRRPI 296
TA VGT Y +PE +++ G D WS GVFLYE++ G P
Sbjct: 227 DTA-VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 103/228 (45%), Gaps = 23/228 (10%)
Query: 77 IAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEV 136
I +L+ +++ VIG G FG V K++ ++ ++ +R + E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 137 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWA----M 192
+ + +V+L + A D+R + +V EYMP G + +S + WA
Sbjct: 126 DIMAFANSPWVVQL--FYAFQDDRYL--YMVMEYMPGGDLVNLMS-NYDVPEKWARFYTA 180
Query: 193 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
+ +A DA + ++H RD K N+LLD+ + KL+DFG EG
Sbjct: 181 EVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 231
Query: 253 STAVVGTMGYAAPEYVQT----GRLAARSDVWSYGVFLYELITGRRPI 296
TA VGT Y +PE +++ G D WS GVFLYE++ G P
Sbjct: 232 DTA-VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 86/178 (48%), Gaps = 29/178 (16%)
Query: 195 KIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA-RLGPSEGFTHVS 253
KI + L +L E + +II RD K SNILLD N KL DFG++ +L S
Sbjct: 129 KITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA----K 182
Query: 254 TAVVGTMGYAAPEYVQTGR----LAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQ 309
T G Y APE + RSDVWS G+ LYEL TGR P + +Q L Q
Sbjct: 183 TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ-LTQ 241
Query: 310 WVK---PYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
VK P LS+++ E ++S + + NLCL K+ RPK E+L+
Sbjct: 242 VVKGDPPQLSNSE----------EREFSPSFI----NFVNLCLTKDESKRPKYKELLK 285
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 19/217 (8%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE----WMT-EVNFL 139
++F ++GEG F V + + + E A+K L +R KE ++T E + +
Sbjct: 37 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 91
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
++H VKL +C DDE+ L Y NG + +Y+ K + R A+
Sbjct: 92 SRLDHPFFVKLY-FCFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 146
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 259
+ L YLH II RD K NILL+E + +++DFG A++ E + VGT
Sbjct: 147 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 260 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 37/224 (16%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGGHKEW---MTEVNFLGIV-EHQN 146
+GEG FG V + + + + P++ +VAVK L K+ ++E+ + ++ +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR------------- 193
++ L+G C D + + EY G++ +YL + L ++
Sbjct: 96 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 194 -LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
+ A ARG+ YL + I RD + N+L+ E K++DFGLAR H+
Sbjct: 152 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHI 203
Query: 253 STAVVGTMG-----YAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
T G + APE + +SDVWS+GV L+E+ T
Sbjct: 204 DXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 95/212 (44%), Gaps = 25/212 (11%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK-----EWMTEVNFLGIVEHQNL 147
+G G FG V K E +VAVK L R+ + E+ L + H ++
Sbjct: 19 LGVGTFGKV-----KIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHI 73
Query: 148 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 207
+KL + + +V EY+ G + Y+ A RL Q + Y
Sbjct: 74 IKLYQVISTPTDF----FMVMEYVSGGELFDYICKHGRVEEMEARRL--FQQILSAVDYC 127
Query: 208 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEY 267
H M ++ RD K N+LLD NAK++DFGL+ + F S G+ YAAPE
Sbjct: 128 HRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNYAAPE- 180
Query: 268 VQTGRLAA--RSDVWSYGVFLYELITGRRPID 297
V +GRL A D+WS GV LY L+ G P D
Sbjct: 181 VISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 117/244 (47%), Gaps = 26/244 (10%)
Query: 67 QRPSNLKEFTIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR 126
+ + LKE +++ ++ + +GE FG VYKG + Q VA+K L +
Sbjct: 15 HKQAKLKEISLSAVRFMEE-------LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK 67
Query: 127 GG---HKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYL--- 180
+E+ E ++H N+V L+G D +++ Y +G + ++L
Sbjct: 68 AEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS----MIFSYCSHGDLHEFLVMR 123
Query: 181 SPKSETILTWAMR-LKIA---QDAARGLAYLHEGMDF----QIIVRDFKSSNILLDEQWN 232
SP S+ T R +K A D +A + GM++ ++ +D + N+L+ ++ N
Sbjct: 124 SPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLN 183
Query: 233 AKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT- 291
K+SD GL R + + + + + + APE + G+ + SD+WSYGV L+E+ +
Sbjct: 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSY 243
Query: 292 GRRP 295
G +P
Sbjct: 244 GLQP 247
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 105/226 (46%), Gaps = 28/226 (12%)
Query: 77 IAELKSATKNFSRSVVIGEGGFGCVYK------GLIKNSEDPSQKVEVAVKQLGRRGGHK 130
+ ELK +F + +G G G V+K GL+ + +++ A++
Sbjct: 27 VGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-------- 76
Query: 131 EWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
+ + E+ L +V G D E I E+M GS+DQ L K +
Sbjct: 77 QIIRELQVLHECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSLDQVL--KKAGRIPE 130
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
+ K++ +GL YL E +I+ RD K SNIL++ + KL DFG++ +
Sbjct: 131 QILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLID 184
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
++ + VGT Y +PE +Q + +SD+WS G+ L E+ GR PI
Sbjct: 185 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 103/228 (45%), Gaps = 23/228 (10%)
Query: 77 IAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEV 136
I +L+ +++ VIG G FG V K++ ++ ++ +R + E
Sbjct: 66 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 137 NFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWA----M 192
+ + +V+L + A D+R + +V EYMP G + +S + WA
Sbjct: 126 DIMAFANSPWVVQL--FYAFQDDRYL--YMVMEYMPGGDLVNLMS-NYDVPEKWARFYTA 180
Query: 193 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
+ +A DA + ++H RD K N+LLD+ + KL+DFG EG
Sbjct: 181 EVVLALDAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 231
Query: 253 STAVVGTMGYAAPEYVQT----GRLAARSDVWSYGVFLYELITGRRPI 296
TA VGT Y +PE +++ G D WS GVFLYE++ G P
Sbjct: 232 DTA-VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 110/233 (47%), Gaps = 19/233 (8%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQ--KVEVAVKQLGRRGGHKEWMT--EVNFLGIVEHQNL 147
V+G+GG+G V++ + + ++V K + R T E N L V+H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 148 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 207
V L+ Y + G + L+ EY+ G + ++ + E I + + L +L
Sbjct: 84 VDLI-YAF---QTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALGHL 137
Query: 208 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEY 267
H+ II RD K NI+L+ Q + KL+DFGL + +G V+ GT+ Y APE
Sbjct: 138 HQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG--TVTHTFCGTIEYMAPEI 192
Query: 268 VQTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPRSEQKLLQW---VKPYLS 316
+ D WS G +Y+++TG P NR ++ K+L+ + PYL+
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLT 245
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 105/235 (44%), Gaps = 22/235 (9%)
Query: 80 LKSATKNFSRSVVIGEGGFGCVYKGL-IKNSEDPSQKVEVAVKQLGRRGGHKEWMTEV-- 136
L A + + IGEG +G V+K +KN V V Q G G + EV
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRV-QTGEEGMPLSTIREVAV 64
Query: 137 -NFLGIVEHQNLVKLVGYC-ADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRL 194
L EH N+V+L C +R + LV+E+ VDQ L+ + + +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEH-----VDQDLTTYLDKVPEPGVPT 119
Query: 195 KIAQDAA----RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
+ +D RGL +LH +++ RD K NIL+ KL+DFGLAR+ F
Sbjct: 120 ETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQ 173
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQ 305
T+VV T+ Y APE + A D+WS G E+ R+P+ R +Q
Sbjct: 174 MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQ 227
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 102/223 (45%), Gaps = 11/223 (4%)
Query: 79 ELKSATKN-FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVN 137
E + TKN F + V+G+GGFG V ++ + ++ K++ +R G + E
Sbjct: 177 ERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ 236
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
L V + +V L D LV M G + ++ + A + A
Sbjct: 237 ILEKVNSRFVVSLAYAYETKD----ALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
+ GL LH +I+ RD K NILLD+ + ++SD GLA P EG T V
Sbjct: 293 AEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP-EGQT--IKGRV 346
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNR 300
GT+GY APE V+ R D W+ G LYE+I G+ P + +
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 102/223 (45%), Gaps = 11/223 (4%)
Query: 79 ELKSATKN-FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVN 137
E + TKN F + V+G+GGFG V ++ + ++ K++ +R G + E
Sbjct: 177 ERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ 236
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
L V + +V L D LV M G + ++ + A + A
Sbjct: 237 ILEKVNSRFVVSLAYAYETKD----ALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
+ GL LH +I+ RD K NILLD+ + ++SD GLA P EG T V
Sbjct: 293 AEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP-EGQT--IKGRV 346
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNR 300
GT+GY APE V+ R D W+ G LYE+I G+ P + +
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 99/225 (44%), Gaps = 24/225 (10%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK-------EWMTE 135
AT + IG G +G VYK + DP VA+K + G + E
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYK-----ARDPHSGHFVALKSVRVPNGGGGGGGLPISTVRE 61
Query: 136 VNFL---GIVEHQNLVKLVGYCADD-DERGIQRLLVYEYMPNGSVDQYLSPKSETILTWA 191
V L EH N+V+L+ CA +R I+ LV+E++ + + YL L
Sbjct: 62 VALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAE 120
Query: 192 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 251
+ + RGL +LH I+ RD K NIL+ KL+DFGLAR+ +
Sbjct: 121 TIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQM 174
Query: 252 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
T VV T+ Y APE + A D+WS G E+ R+P+
Sbjct: 175 ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 218
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 105/235 (44%), Gaps = 22/235 (9%)
Query: 80 LKSATKNFSRSVVIGEGGFGCVYKGL-IKNSEDPSQKVEVAVKQLGRRGGHKEWMTEV-- 136
L A + + IGEG +G V+K +KN V V Q G G + EV
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRV-QTGEEGMPLSTIREVAV 64
Query: 137 -NFLGIVEHQNLVKLVGYC-ADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRL 194
L EH N+V+L C +R + LV+E+ VDQ L+ + + +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEH-----VDQDLTTYLDKVPEPGVPT 119
Query: 195 KIAQDAA----RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
+ +D RGL +LH +++ RD K NIL+ KL+DFGLAR+ F
Sbjct: 120 ETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQ 173
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQ 305
T+VV T+ Y APE + A D+WS G E+ R+P+ R +Q
Sbjct: 174 MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQ 227
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 127/305 (41%), Gaps = 39/305 (12%)
Query: 71 NLKEFTIAELKSATKNFSRSVVIGEGGFGCVYKG-LIKNSEDPSQKVEVAVKQLGRRGGH 129
+L E ++ L+ F ++G G +G VYKG +K + A+K + G
Sbjct: 10 SLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQ------LAAIKVMDVTGDE 63
Query: 130 KEWM-TEVNFLG-IVEHQNLVKLVGYCADDDERGI--QRLLVYEYMPNGSVDQYLSPKSE 185
+E + E+N L H+N+ G + G+ Q LV E+ GSV +
Sbjct: 64 EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG 123
Query: 186 TILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGL-ARLG 244
L I ++ RGL++LH+ ++I RD K N+LL E KL DFG+ A+L
Sbjct: 124 NTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 180
Query: 245 PSEGFTHVSTAVVGTMGYAAPEYVQT-----GRLAARSDVWSYGVFLYELITGRRPIDRN 299
+ G +GT + APE + +SD+WS G+ E+ G P+
Sbjct: 181 RTVG---RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM 237
Query: 300 RPRSEQKLLQWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKM 359
P L+ + PRL+ K + K CLVKN RP
Sbjct: 238 HPMRALFLIP-------------RNPAPRLKSK---KWSKKFQSFIESCLVKNHSQRPAT 281
Query: 360 SEVLE 364
++++
Sbjct: 282 EQLMK 286
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 108/227 (47%), Gaps = 45/227 (19%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNF--LGIVEHQNLVK 149
+IG G +G VYKG + + V V V R + ++ E N + ++EH N+ +
Sbjct: 20 LIGRGRYGAVYKGSLD-----ERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIAR 71
Query: 150 -LVGYCADDDER-----GIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARG 203
+VG DER ++ LLV EY PNGS+ +YLS + W ++A RG
Sbjct: 72 FIVG-----DERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS---DWVSSCRLAHSVTRG 123
Query: 204 LAYLH----EGMDFQ--IIVRDFKSSNILLDEQWNAKLSDFGLA------RLGPSEGFTH 251
LAYLH G ++ I RD S N+L+ +SDFGL+ RL +
Sbjct: 124 LAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDN 183
Query: 252 VSTAVVGTMGYAAPEYVQTGRLAARS--------DVWSYGVFLYELI 290
+ + VGT+ Y APE ++ G + R D+++ G+ +E+
Sbjct: 184 AAISEVGTIRYMAPEVLE-GAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 110/233 (47%), Gaps = 19/233 (8%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQ--KVEVAVKQLGRRGGHKEWMT--EVNFLGIVEHQNL 147
V+G+GG+G V++ + + ++V K + R T E N L V+H +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 148 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 207
V L+ Y + G + L+ EY+ G + ++ + E I + + L +L
Sbjct: 84 VDLI-YAF---QTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALGHL 137
Query: 208 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEY 267
H+ II RD K NI+L+ Q + KL+DFGL + +G V+ GT+ Y APE
Sbjct: 138 HQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG--TVTHXFCGTIEYMAPEI 192
Query: 268 VQTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPRSEQKLLQW---VKPYLS 316
+ D WS G +Y+++TG P NR ++ K+L+ + PYL+
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLT 245
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 27/219 (12%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGGHKEW---MTEVNFLGIV-EHQN 146
+GEG FG V + + + + P + V VAVK L K+ ++E+ + ++ +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--------------SETILTWAM 192
++ L+G C D + + EY G++ +YL + E +T+
Sbjct: 149 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 193 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
+ ARG+ YL + I RD + N+L+ E K++DFGLAR + +
Sbjct: 205 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 261
Query: 253 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+T + + APE + +SDVWS+GV ++E+ T
Sbjct: 262 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 14/202 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLVG 152
+GEG + VYKG K +++ E+ ++ G + EV+ L ++H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEH--EEGAPCTAIREVSLLKDLKHANIVTL-- 65
Query: 153 YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMD 212
+ E+ + LV+EY+ + + QYL I ++L + Q RGLAY H
Sbjct: 66 HDIIHTEKSLT--LVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQ-LLRGLAYCHRQ-- 119
Query: 213 FQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPE-YVQTG 271
+++ RD K N+L++E+ KL+DFGLAR T+ + V T+ Y P+ + +
Sbjct: 120 -KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILLGST 176
Query: 272 RLAARSDVWSYGVFLYELITGR 293
+ + D+W G YE+ TGR
Sbjct: 177 DYSTQIDMWGVGCIFYEMATGR 198
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 27/219 (12%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGGHKEW---MTEVNFLGIV-EHQN 146
+GEG FG V + + + + P++ +VAVK L K+ ++E+ + ++ +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR------------- 193
++ L+G C D + + EY G++ +YL + L ++
Sbjct: 96 IINLLGACTQDGPLYV----IVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 194 -LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
+ A ARG+ YL + I RD + N+L+ E K++DFGLAR +
Sbjct: 152 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 253 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+T + + APE + +SDVWS+GV L+E+ T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 27/219 (12%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGGHKEW---MTEVNFLGIV-EHQN 146
+GEG FG V + + + + P++ +VAVK L K+ ++E+ + ++ +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR------------- 193
++ L+G C D + + EY G++ +YL + L ++
Sbjct: 89 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 194 -LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
+ A ARG+ YL + I RD + N+L+ E K++DFGLAR +
Sbjct: 145 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 201
Query: 253 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+T + + APE + +SDVWS+GV L+E+ T
Sbjct: 202 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 97/222 (43%), Gaps = 31/222 (13%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTEVNFL 139
++F +G+G FG VY + S K +A+K QL + G + EV
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQS-----KFILALKVLFKTQLEKAGVEHQLRREVEIQ 66
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS----ETILTWAMRLK 195
+ H N+++L GY D + L+ EY P G+V + L S + T+ L
Sbjct: 67 SHLRHPNILRLYGYFHD----ATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL- 121
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTA 255
A L+Y H ++I RD K N+LL K++DFG + PS
Sbjct: 122 -----ANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR----RDT 169
Query: 256 VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 297
+ GT+ Y PE ++ + D+WS GV YE + G P +
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 27/219 (12%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGGHKEW---MTEVNFLGIV-EHQN 146
+GEG FG V + + + + P++ +VAVK L K+ ++E+ + ++ +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR------------- 193
++ L+G C D + + EY G++ +YL + L +
Sbjct: 81 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 194 -LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
+ A ARG+ YL + I RD + N+L+ E K++DFGLAR +
Sbjct: 137 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193
Query: 253 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+T + + APE + +SDVWS+GV L+E+ T
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 27/219 (12%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGGHKEW---MTEVNFLGIV-EHQN 146
+GEG FG V + + + + P++ +VAVK L K+ ++E+ + ++ +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR------------- 193
++ L+G C D + + EY G++ +YL + L ++
Sbjct: 85 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 194 -LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
+ A ARG+ YL + I RD + N+L+ E K++DFGLAR +
Sbjct: 141 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 197
Query: 253 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+T + + APE + +SDVWS+GV L+E+ T
Sbjct: 198 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 102/233 (43%), Gaps = 34/233 (14%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEW---MTEVNFLGI 141
KN +GEG FG V K + + + VAVK L E ++E N L
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 142 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK------------------ 183
V H +++KL G C+ D LL+ EY GS+ +L
Sbjct: 83 VNHPHVIKLYGACSQDGPL----LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 184 ----SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 239
E LT + A ++G+ YL E +++ RD + NIL+ E K+SDFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 240 LAR-LGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
L+R + + + S + + + A E + +SDVWS+GV L+E++T
Sbjct: 196 LSRDVYEEDSYVKRSQGRI-PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 27/219 (12%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGGHKEW---MTEVNFLGIV-EHQN 146
+GEG FG V + + + + P++ +VAVK L K+ ++E+ + ++ +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR------------- 193
++ L+G C D + + EY G++ +YL + L ++
Sbjct: 96 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 194 -LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
+ A ARG+ YL + I RD + N+L+ E K++DFGLAR +
Sbjct: 152 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 253 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+T + + APE + +SDVWS+GV L+E+ T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 27/219 (12%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGGHKEW---MTEVNFLGIV-EHQN 146
+GEG FG V + + + + P++ +VAVK L K+ ++E+ + ++ +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR------------- 193
++ L+G C D + + EY G++ +YL + L ++
Sbjct: 88 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 194 -LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
+ A ARG+ YL + I RD + N+L+ E K++DFGLAR +
Sbjct: 144 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 200
Query: 253 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+T + + APE + +SDVWS+GV L+E+ T
Sbjct: 201 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMT-EVNFLGIVEHQNLVKLV 151
+GEG +G V + + +E + V V + + R E + E+ ++ H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 71 GH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH--- 121
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 272 RLAARS-DVWSYGVFLYELITGRRPIDR 298
A DVWS G+ L ++ G P D+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 128/299 (42%), Gaps = 52/299 (17%)
Query: 75 FTIAELKSATKNFSRSVVIGEGGFGCVYK------GLIKNSEDPSQKVEVAVKQLGRRGG 128
+ ELK +F + +G G G V+K GL+ + +++ A++
Sbjct: 1 MALGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN------ 52
Query: 129 HKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETIL 188
+ + E+ L +V G D E I E+M GS+DQ L K +
Sbjct: 53 --QIIRELQVLHECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSLDQVL--KKAGRI 104
Query: 189 TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG 248
+ K++ +GL YL E +I+ RD K SNIL++ + KL DFG++ +
Sbjct: 105 PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQL 158
Query: 249 FTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLL 308
++ VGT Y +PE +Q + +SD+WS G+ L E+ GR P P + +LL
Sbjct: 159 IDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP---RPPMAIFELL 215
Query: 309 QWV----KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 363
++ P L A +SL + N CL+KN R + +++
Sbjct: 216 DYIVNEPPPKLPSA-------------VFSL----EFQDFVNKCLIKNPAERADLKQLM 257
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMT-EVNFLGIVEHQNLVKLV 151
+GEG +G V + + +E + V V + + R E + E+ ++ H+N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFY 71
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 72 GH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH--- 122
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 272 RLAARS-DVWSYGVFLYELITGRRPIDR 298
A DVWS G+ L ++ G P D+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%), Gaps = 19/218 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGG---HKEWMTEVNFLGIVEHQNLVK 149
+GE FG VYKG + Q VA+K L + +E+ E ++H N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYL---SPKSETILTWAMR-LKIA---QDAAR 202
L+G D +++ Y +G + ++L SP S+ T R +K A D
Sbjct: 77 LLGVVTKDQPLS----MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132
Query: 203 GLAYLHEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVG 258
+A + GM++ ++ +D + N+L+ ++ N K+SD GL R + + + +
Sbjct: 133 LVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 192
Query: 259 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
+ + APE + G+ + SD+WSYGV L+E+ + G +P
Sbjct: 193 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 230
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMT-EVNFLGIVEHQNLVKLV 151
+GEG +G V + + +E + V V + + R E + E+ ++ H+N+VK
Sbjct: 13 LGEGAYGEVQLAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 69
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 70 GH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH--- 120
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 121 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 180
Query: 272 RLAARS-DVWSYGVFLYELITGRRPIDR 298
A DVWS G+ L ++ G P D+
Sbjct: 181 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 208
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 27/219 (12%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGGHKEW---MTEVNFLGIV-EHQN 146
+GEG FG V + + + + P++ +VAVK L K+ ++E+ + ++ +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR------------- 193
++ L+G C D + + EY G++ +YL + L +
Sbjct: 96 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 194 -LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
+ A ARG+ YL + I RD + N+L+ E K++DFGLAR +
Sbjct: 152 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 253 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+T + + APE + +SDVWS+GV L+E+ T
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMT-EVNFLGIVEHQNLVKLV 151
+GEG +G V + + +E + V V + + R E + E+ ++ H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 71 GH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH--- 121
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 272 RLAARS-DVWSYGVFLYELITGRRPIDR 298
A DVWS G+ L ++ G P D+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 27/219 (12%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGGHKEW---MTEVNFLGIV-EHQN 146
+GEG FG V + + + + P + V VAVK L K+ ++E+ + ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--------------SETILTWAM 192
++ L+G C D + + EY G++ +YL + E +T+
Sbjct: 103 IITLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 193 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
+ ARG+ YL + I RD + N+L+ E K++DFGLAR + +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 253 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+T + + APE + +SDVWS+GV ++E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 27/219 (12%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGGHKEW---MTEVNFLGIV-EHQN 146
+GEG FG V + + + + P + V VAVK L K+ ++E+ + ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--------------SETILTWAM 192
++ L+G C D + + EY G++ +YL + E +T+
Sbjct: 103 IIHLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 193 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
+ ARG+ YL + I RD + N+L+ E K++DFGLAR + +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 253 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+T + + APE + +SDVWS+GV ++E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 104/228 (45%), Gaps = 33/228 (14%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIK--NSEDPSQ--------KVEVAVKQLGRRGGHK 130
K+ F V+G+G FG V+ L+K + D Q K + V+ R +
Sbjct: 20 KADPSQFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMER 77
Query: 131 EWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
+ + EVN H +VKL + A E + L+ +++ G + LS E + T
Sbjct: 78 DILVEVN------HPFIVKL--HYAFQTEGKL--YLILDFLRGGDLFTRLS--KEVMFTE 125
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
+ A L +LH II RD K NILLDE+ + KL+DFGL++ E
Sbjct: 126 EDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK----ESID 178
Query: 251 HVSTA--VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
H A GT+ Y APE V +D WS+GV ++E++TG P
Sbjct: 179 HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 27/219 (12%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGGHKEW---MTEVNFLGIV-EHQN 146
+GEG FG V + + + + P + V VAVK L K+ ++E+ + ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--------------SETILTWAM 192
++ L+G C D + + EY G++ +YL + E +T+
Sbjct: 103 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 193 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
+ ARG+ YL + I RD + N+L+ E K++DFGLAR + +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKN 215
Query: 253 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+T + + APE + +SDVWS+GV ++E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMT-EVNFLGIVEHQNLVKLV 151
+GEG +G V + + +E + V V + + R E + E+ ++ H+N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 72 GH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH--- 122
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 272 RLAARS-DVWSYGVFLYELITGRRPIDR 298
A DVWS G+ L ++ G P D+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMT-EVNFLGIVEHQNLVKLV 151
+GEG +G V + + +E + V V + + R E + E+ ++ H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 71 GH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH--- 121
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 272 RLAARS-DVWSYGVFLYELITGRRPIDR 298
A DVWS G+ L ++ G P D+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMT-EVNFLGIVEHQNLVKLV 151
+GEG +G V + + +E + V V + + R E + E+ ++ H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 71 GH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH--- 121
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 272 RLAARS-DVWSYGVFLYELITGRRPIDR 298
A DVWS G+ L ++ G P D+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMT-EVNFLGIVEHQNLVKLV 151
+GEG +G V + + +E + V V + + R E + E+ ++ H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 71 GH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH--- 121
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 272 RLAARS-DVWSYGVFLYELITGRRPIDR 298
A DVWS G+ L ++ G P D+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 100/227 (44%), Gaps = 22/227 (9%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR----RGGHKE 131
T A+ + N+ IG+G F V K + EVAVK + + ++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKV-----KLARHILTGKEVAVKIIDKTQLNSSSLQK 59
Query: 132 WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWA 191
EV + ++ H N+VKL + + E+ + LV EY G V YL A
Sbjct: 60 LFREVRIMKVLNHPNIVKL--FEVIETEKTL--YLVMEYASGGEVFDYLVAHGRMKEKEA 115
Query: 192 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 251
R K Q + + Y H+ I+ RD K+ N+LLD N K++DFG + F +
Sbjct: 116 -RAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGN 167
Query: 252 VSTAVVGTMGYAAPEYVQTGRL-AARSDVWSYGVFLYELITGRRPID 297
A G YAAPE Q + DVWS GV LY L++G P D
Sbjct: 168 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 133/295 (45%), Gaps = 47/295 (15%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFLGIVEHQNLVK 149
+G+G FG VY+G ++ + VAVK + +E ++ E + + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLS---PKSET-----ILTWAMRLKIAQDAA 201
L+G + +G L+V E M +G + YL P++E T +++A + A
Sbjct: 85 LLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
G+AYL+ + + RD + N ++ + K+ DFG+ R + + +
Sbjct: 141 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR 197
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPY--LSDAK 319
+ APE ++ G SD+WS+GV L+E+ + +EQ PY LS+ +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQ-------PYQGLSNEQ 240
Query: 320 QFRQIVDPRLEGKY---SLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVD 371
+ ++D G Y +++ + +C N + RP LE+VN + D
Sbjct: 241 VLKFVMD----GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF---LEIVNLLKD 288
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMT-EVNFLGIVEHQNLVKLV 151
+GEG +G V + + +E + V V + + R E + E+ ++ H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 71 GH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH--- 121
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 272 RLAARS-DVWSYGVFLYELITGRRPIDR 298
A DVWS G+ L ++ G P D+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMT-EVNFLGIVEHQNLVKLV 151
+GEG +G V + + +E + V V + + R E + E+ ++ H+N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 72 GH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH--- 122
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 272 RLAARS-DVWSYGVFLYELITGRRPIDR 298
A DVWS G+ L ++ G P D+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMT-EVNFLGIVEHQNLVKLV 151
+GEG +G V + + +E + V V + + R E + E+ ++ H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 71 GH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH--- 121
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 272 RLAARS-DVWSYGVFLYELITGRRPIDR 298
A DVWS G+ L ++ G P D+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 27/219 (12%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGGHKEW---MTEVNFLGIV-EHQN 146
+GEG FG V + + + + P + V VAVK L K+ ++E+ + ++ +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--------------SETILTWAM 192
++ L+G C D + + EY G++ +YL + E +T+
Sbjct: 90 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 193 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
+ ARG+ YL + I RD + N+L+ E K++DFGLAR + +
Sbjct: 146 LVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKK 202
Query: 253 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+T + + APE + +SDVWS+GV ++E+ T
Sbjct: 203 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMT-EVNFLGIVEHQNLVKLV 151
+GEG +G V + + +E + V V + + R E + E+ ++ H+N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 72 GH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH--- 122
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 272 RLAARS-DVWSYGVFLYELITGRRPIDR 298
A DVWS G+ L ++ G P D+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 99/232 (42%), Gaps = 32/232 (13%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEW---MTEVNFLGI 141
KN +GEG FG V K + + + VAVK L E ++E N L
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 142 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK------------------ 183
V H +++KL G C+ D LL+ EY GS+ +L
Sbjct: 83 VNHPHVIKLYGACSQDGPL----LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 184 ----SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 239
E LT + A ++G+ YL E +++ RD + NIL+ E K+SDFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 240 LARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
L+R E + + + A E + +SDVWS+GV L+E++T
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMT-EVNFLGIVEHQNLVKLV 151
+GEG +G V + + +E + V V + + R E + E+ ++ H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 71 GH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH--- 121
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 272 RLAARS-DVWSYGVFLYELITGRRPIDR 298
A DVWS G+ L ++ G P D+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH--KEWMTEVNFLGIVEHQNLVK 149
++GEG FG V +G +K + S KV V +L +E+++E + H N+++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 150 LVGYCADDDERGIQR-LLVYEYMPNGSVDQYL-------SPKSETILTWAMRLKIAQDAA 201
L+G C + +GI + +++ +M G + YL PK + T LK D A
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTL---LKFMVDIA 157
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
G+ YL + + RD + N +L + ++DFGL++ S + +
Sbjct: 158 LGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK 214
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+ A E + ++SDVW++GV ++E+ T
Sbjct: 215 WIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMT-EVNFLGIVEHQNLVKLV 151
+GEG +G V + + +E + V V + + R E + E+ ++ H+N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 72 GH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH--- 122
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 272 RLAARS-DVWSYGVFLYELITGRRPIDR 298
A DVWS G+ L ++ G P D+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMT-EVNFLGIVEHQNLVKLV 151
+GEG +G V + + +E + V V + + R E + E+ ++ H+N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 72 GH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH--- 122
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 272 RLAARS-DVWSYGVFLYELITGRRPIDR 298
A DVWS G+ L ++ G P D+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMT-EVNFLGIVEHQNLVKLV 151
+GEG +G V + + +E + V V + + R E + E+ ++ H+N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 72 GH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH--- 122
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 272 RLAARS-DVWSYGVFLYELITGRRPIDR 298
A DVWS G+ L ++ G P D+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMT-EVNFLGIVEHQNLVKLV 151
+GEG +G V + + +E + V V + + R E + E+ ++ H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 71 GH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH--- 121
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 272 RLAARS-DVWSYGVFLYELITGRRPIDR 298
A DVWS G+ L ++ G P D+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 27/219 (12%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGGHKEW---MTEVNFLGIV-EHQN 146
+GEG FG V + + + + P++ +VAVK L K+ ++E+ + ++ +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR------------- 193
++ L+G C D + + EY G++ +YL + L ++
Sbjct: 137 IINLLGACTQDGPLYV----IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 194 -LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
+ A ARG+ YL + I RD + N+L+ E K++DFGLAR +
Sbjct: 193 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 249
Query: 253 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+T + + APE + +SDVWS+GV L+E+ T
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK-EWMTEVNFLGIVEHQNLVKLV 151
+G G FG V KG + + +K K E + E N + +++ +V+++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSP----KSETILTWAMRLKIAQDAARGLAYL 207
G C + +LV E G +++YL K + I+ ++ + G+ YL
Sbjct: 95 GICEAE-----SWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKYL 143
Query: 208 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAAPE 266
E + RD + N+LL Q AK+SDFGL++ L E + T + + APE
Sbjct: 144 EES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 200
Query: 267 YVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
+ + +++SDVWS+GV ++E + G++P
Sbjct: 201 CINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK-EWMTEVNFLGIVEHQNLVKLV 151
+G G FG V KG + + +K K E + E N + +++ +V+++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSP----KSETILTWAMRLKIAQDAARGLAYL 207
G C + +LV E G +++YL K + I+ ++ + G+ YL
Sbjct: 95 GICEAE-----SWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKYL 143
Query: 208 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAAPE 266
E + RD + N+LL Q AK+SDFGL++ L E + T + + APE
Sbjct: 144 EES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 200
Query: 267 YVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
+ + +++SDVWS+GV ++E + G++P
Sbjct: 201 CINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 27/219 (12%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGGHKEW---MTEVNFLGIV-EHQN 146
+GEG FG V + + + + P + V VAVK L K+ ++E+ + ++ +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--------------SETILTWAM 192
++ L+G C D + + EY G++ +YL + E +T+
Sbjct: 92 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 193 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
+ ARG+ YL + I RD + N+L+ E K++DFGLAR + +
Sbjct: 148 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 204
Query: 253 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+T + + APE + +SDVWS+GV ++E+ T
Sbjct: 205 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 104/228 (45%), Gaps = 33/228 (14%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIK--NSEDPSQ--------KVEVAVKQLGRRGGHK 130
K+ F V+G+G FG V+ L+K + D Q K + V+ R +
Sbjct: 20 KADPSQFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMER 77
Query: 131 EWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
+ + EVN H +VKL + A E + L+ +++ G + LS E + T
Sbjct: 78 DILVEVN------HPFIVKL--HYAFQTEGKLY--LILDFLRGGDLFTRLS--KEVMFTE 125
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
+ A L +LH II RD K NILLDE+ + KL+DFGL++ E
Sbjct: 126 EDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK----ESID 178
Query: 251 HVSTA--VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
H A GT+ Y APE V +D WS+GV ++E++TG P
Sbjct: 179 HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 104/228 (45%), Gaps = 33/228 (14%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIK--NSEDPSQ--------KVEVAVKQLGRRGGHK 130
K+ F V+G+G FG V+ L+K + D Q K + V+ R +
Sbjct: 21 KADPSQFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMER 78
Query: 131 EWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
+ + EVN H +VKL + A E + L+ +++ G + LS E + T
Sbjct: 79 DILVEVN------HPFIVKL--HYAFQTEGKLY--LILDFLRGGDLFTRLS--KEVMFTE 126
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
+ A L +LH II RD K NILLDE+ + KL+DFGL++ E
Sbjct: 127 EDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK----ESID 179
Query: 251 HVSTA--VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
H A GT+ Y APE V +D WS+GV ++E++TG P
Sbjct: 180 HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 227
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMT-EVNFLGIVEHQNLVKLV 151
+GEG +G V + + +E + V V + + R E + E+ ++ H+N+VK
Sbjct: 15 LGEGAYGEVQLAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 71
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 72 GH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH--- 122
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 182
Query: 272 RLAARS-DVWSYGVFLYELITGRRPIDR 298
A DVWS G+ L ++ G P D+
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 27/219 (12%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGGHKEW---MTEVNFLGIV-EHQN 146
+GEG FG V + + + + P + V VAVK L K+ ++E+ + ++ +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--------------SETILTWAM 192
++ L+G C D + + EY G++ +YL + E +T+
Sbjct: 95 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 193 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
+ ARG+ YL + I RD + N+L+ E K++DFGLAR + +
Sbjct: 151 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 207
Query: 253 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+T + + APE + +SDVWS+GV ++E+ T
Sbjct: 208 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 107/221 (48%), Gaps = 26/221 (11%)
Query: 79 ELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR-----GGHKEWM 133
++KS K + + +GEG F VYK KN+ +Q V + +LG R G ++ +
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNT---NQIVAIKKIKLGHRSEAKDGINRTAL 60
Query: 134 TEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR 193
E+ L + H N++ L+ A + I LV+++M D + K +++
Sbjct: 61 REIKLLQELSHPNIIGLLD--AFGHKSNIS--LVFDFM---ETDLEVIIKDNSLVLTPSH 113
Query: 194 LKIAQ-DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL--GPSEGFT 250
+K +GL YLH+ I+ RD K +N+LLDE KL+DFGLA+ P+ +
Sbjct: 114 IKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYX 170
Query: 251 HVSTAVVGTMGYAAPEYVQTGRL-AARSDVWSYGVFLYELI 290
H V T Y APE + R+ D+W+ G L EL+
Sbjct: 171 H----QVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 26/217 (11%)
Query: 86 NFSRSVVIGEGGFGCVYK------GLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFL 139
+F + +G G G V+K GL+ + +++ A++ + + E+ L
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN--------QIIRELQVL 58
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
+V G D E I E+M GS+DQ L K + + K++
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSLDQVL--KKAGRIPEQILGKVSIA 112
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 259
+GL YL E +I+ RD K SNIL++ + KL DFG++ + ++ + VGT
Sbjct: 113 VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGT 166
Query: 260 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
Y +PE +Q + +SD+WS G+ L E+ GR PI
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMT-EVNFLGIVEHQNLVKLV 151
+GEG +G V + + +E + V V + + R E + E+ ++ H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 71 GH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH--- 121
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 272 RLAARS-DVWSYGVFLYELITGRRPIDR 298
A DVWS G+ L ++ G P D+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 8/131 (6%)
Query: 166 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 225
+ E+M GS+DQ L K + + K++ +GL YL E +I+ RD K SNI
Sbjct: 81 ICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNI 136
Query: 226 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 285
L++ + KL DFG++ + ++ + VGT Y +PE +Q + +SD+WS G+
Sbjct: 137 LVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS 192
Query: 286 LYELITGRRPI 296
L E+ GR PI
Sbjct: 193 LVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 8/131 (6%)
Query: 166 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 225
+ E+M GS+DQ L K + + K++ +GL YL E +I+ RD K SNI
Sbjct: 81 ICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNI 136
Query: 226 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 285
L++ + KL DFG++ + ++ + VGT Y +PE +Q + +SD+WS G+
Sbjct: 137 LVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS 192
Query: 286 LYELITGRRPI 296
L E+ GR PI
Sbjct: 193 LVEMAVGRYPI 203
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 26/217 (11%)
Query: 86 NFSRSVVIGEGGFGCVYK------GLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFL 139
+F + +G G G V+K GL+ + +++ A++ + + E+ L
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN--------QIIRELQVL 58
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
+V G D E I E+M GS+DQ L K + + K++
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISI----CMEHMDGGSLDQVL--KKAGRIPEQILGKVSIA 112
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 259
+GL YL E +I+ RD K SNIL++ + KL DFG++ + ++ + VGT
Sbjct: 113 VIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGT 166
Query: 260 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
Y +PE +Q + +SD+WS G+ L E+ GR PI
Sbjct: 167 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK-EWMTEVNFLGIVEHQNLVKLV 151
+G G FG V KG + + +K K E + E N + +++ +V+++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSP----KSETILTWAMRLKIAQDAARGLAYL 207
G C + +LV E G +++YL K + I+ ++ + G+ YL
Sbjct: 93 GICEAE-----SWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKYL 141
Query: 208 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAAPE 266
E + RD + N+LL Q AK+SDFGL++ L E + T + + APE
Sbjct: 142 EES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 198
Query: 267 YVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
+ + +++SDVWS+GV ++E + G++P
Sbjct: 199 CINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMT-EVNFLGIVEHQNLVKLV 151
+GEG +G V + + +E + V V + + R E + E+ ++ H+N+VK
Sbjct: 14 LGEGAYGEVQLAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 71 GH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH--- 121
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRR 181
Query: 272 RLAARS-DVWSYGVFLYELITGRRPIDR 298
A DVWS G+ L ++ G P D+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 98/232 (42%), Gaps = 32/232 (13%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEW---MTEVNFLGI 141
KN +GEG FG V K + + + VAVK L E ++E N L
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 142 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK------------------ 183
V H +++KL G C+ D LL+ EY GS+ +L
Sbjct: 83 VNHPHVIKLYGACSQDG----PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 184 ----SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 239
E LT + A ++G+ YL E ++ RD + NIL+ E K+SDFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYLAE---MSLVHRDLAARNILVAEGRKMKISDFG 195
Query: 240 LARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
L+R E + + + A E + +SDVWS+GV L+E++T
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 133/295 (45%), Gaps = 47/295 (15%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFLGIVEHQNLVK 149
+G+G FG VY+G ++ + VAVK + +E ++ E + + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLS---PKSET-----ILTWAMRLKIAQDAA 201
L+G + +G L+V E M +G + YL P++E T +++A + A
Sbjct: 85 LLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
G+AYL+ + + RD + N ++ + K+ DFG+ R + + +
Sbjct: 141 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPY--LSDAK 319
+ APE ++ G SD+WS+GV L+E+ + +EQ PY LS+ +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQ-------PYQGLSNEQ 240
Query: 320 QFRQIVDPRLEGKY---SLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVD 371
+ ++D G Y +++ + +C N + RP LE+VN + D
Sbjct: 241 VLKFVMD----GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF---LEIVNLLKD 288
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 19/217 (8%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE----WMT-EVNFL 139
++F ++GEG F V + + + E A+K L +R KE ++T E + +
Sbjct: 30 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 84
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 85 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 139
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 259
+ L YLH II RD K NILL+E + +++DFG A++ E + A VGT
Sbjct: 140 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 260 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 27/219 (12%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGGHKEW---MTEVNFLGIV-EHQN 146
+GEG FG V + + + + P + V VAVK L K+ ++E+ + ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--------------SETILTWAM 192
++ L+G C D + + EY G++ +YL + E +T+
Sbjct: 103 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 193 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
+ ARG+ YL + I RD + N+L+ E +++DFGLAR + +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKK 215
Query: 253 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+T + + APE + +SDVWS+GV ++E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 27/219 (12%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGGHKEW---MTEVNFLGIV-EHQN 146
+GEG FG V + + + + P + V VAVK L K+ ++E+ + ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--------------SETILTWAM 192
++ L+G C D + + EY G++ +YL + E +T+
Sbjct: 103 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 193 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
+ ARG+ YL + I RD + N+L+ E K++DFGLAR +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 253 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+T + + APE + +SDVWS+GV ++E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 27/219 (12%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGGHKEW---MTEVNFLGIV-EHQN 146
+GEG FG V + + + + P + V VAVK L K+ ++E+ + ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--------------SETILTWAM 192
++ L+G C D + + EY G++ +YL + E +T+
Sbjct: 103 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 193 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
+ ARG+ YL + I RD + N+L+ E K++DFGLAR +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 253 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+T + + APE + +SDVWS+GV ++E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK-EWMTEVNFLGIVEHQNLVKLV 151
+G G FG V KG + + +K K E + E N + +++ +V+++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSP----KSETILTWAMRLKIAQDAARGLAYL 207
G C + +LV E G +++YL K + I+ ++ + G+ YL
Sbjct: 75 GICEAE-----SWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKYL 123
Query: 208 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAAPE 266
E + RD + N+LL Q AK+SDFGL++ L E + T + + APE
Sbjct: 124 EES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 180
Query: 267 YVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
+ + +++SDVWS+GV ++E + G++P
Sbjct: 181 CINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK-EWMTEVNFLGIVEHQNLVKLV 151
+G G FG V KG + + +K K E + E N + +++ +V+++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSP----KSETILTWAMRLKIAQDAARGLAYL 207
G C + +LV E G +++YL K + I+ ++ + G+ YL
Sbjct: 85 GICEAE-----SWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKYL 133
Query: 208 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAAPE 266
E + RD + N+LL Q AK+SDFGL++ L E + T + + APE
Sbjct: 134 EES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 190
Query: 267 YVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
+ + +++SDVWS+GV ++E + G++P
Sbjct: 191 CINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 25/207 (12%)
Query: 134 TEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR 193
TE+ L + HQ++ +L E + +V EY P G + Y+ S+ L+
Sbjct: 57 TEIEALKNLRHQHICQLYHVL----ETANKIFMVLEYCPGGELFDYII--SQDRLSEEET 110
Query: 194 LKIAQDAARGLAYLH-EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
+ + +AY+H +G RD K N+L DE KL DFGL H+
Sbjct: 111 RVVFRQIVSAVAYVHSQGYAH----RDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHL 166
Query: 253 STAVVGTMGYAAPEYVQ-TGRLAARSDVWSYGVFLYELITGRRPIDRNRP--------RS 303
T G++ YAAPE +Q L + +DVWS G+ LY L+ G P D + R
Sbjct: 167 QTCC-GSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRG 225
Query: 304 EQKLLQWVKPYLSDAKQFRQI--VDPR 328
+ + +W+ P S +Q+ VDP+
Sbjct: 226 KYDVPKWLSP--SSILLLQQMLQVDPK 250
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE----WMT-E 135
K ++F ++GEG F V + + + E A+K L +R KE ++T E
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRE 60
Query: 136 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
+ + ++H VKL + DDE+ L Y NG + +Y+ K + R
Sbjct: 61 RDVMSRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFY 115
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTA 255
A+ + L YLH II RD K NILL+E + +++DFG A++ E +
Sbjct: 116 TAEIVS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 171
Query: 256 VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
VGT Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 172 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE----WMT-E 135
K ++F ++GEG F V + + + E A+K L +R KE ++T E
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRE 57
Query: 136 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
+ + ++H VKL + DDE+ L Y NG + +Y+ K + R
Sbjct: 58 RDVMSRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFY 112
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTA 255
A+ + L YLH II RD K NILL+E + +++DFG A++ E +
Sbjct: 113 TAEIVS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 168
Query: 256 VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
VGT Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 169 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 132/295 (44%), Gaps = 47/295 (15%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFLGIVEHQNLVK 149
+G+G FG VY+G ++ + VAVK + +E ++ E + + ++V+
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLS---PKSET-----ILTWAMRLKIAQDAA 201
L+G + +G L+V E M +G + YL P++E T +++A + A
Sbjct: 82 LLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
G+AYL+ + + RD + N ++ + K+ DFG+ R + +
Sbjct: 138 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 194
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPY--LSDAK 319
+ APE ++ G SD+WS+GV L+E+ + +EQ PY LS+ +
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQ-------PYQGLSNEQ 237
Query: 320 QFRQIVDPRLEGKY---SLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVD 371
+ ++D G Y +++ + +C N + RP LE+VN + D
Sbjct: 238 VLKFVMD----GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF---LEIVNLLKD 285
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 133/295 (45%), Gaps = 47/295 (15%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFLGIVEHQNLVK 149
+G+G FG VY+G ++ + VAVK + +E ++ E + + ++V+
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLS---PKSET-----ILTWAMRLKIAQDAA 201
L+G + +G L+V E M +G + YL P++E T +++A + A
Sbjct: 84 LLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
G+AYL+ + + RD + N ++ + K+ DFG+ R + + +
Sbjct: 140 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPY--LSDAK 319
+ APE ++ G SD+WS+GV L+E+ + +EQ PY LS+ +
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQ-------PYQGLSNEQ 239
Query: 320 QFRQIVDPRLEGKY---SLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVD 371
+ ++D G Y +++ + +C N + RP LE+VN + D
Sbjct: 240 VLKFVMD----GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF---LEIVNLLKD 287
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK-EWMTEVNFLGIVEHQNLVKLV 151
+G G FG V KG + + +K K E + E N + +++ +V+++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSP----KSETILTWAMRLKIAQDAARGLAYL 207
G C + +LV E G +++YL K + I+ ++ + G+ YL
Sbjct: 73 GICEAE-----SWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKYL 121
Query: 208 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAAPE 266
E + RD + N+LL Q AK+SDFGL++ L E + T + + APE
Sbjct: 122 EES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 178
Query: 267 YVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
+ + +++SDVWS+GV ++E + G++P
Sbjct: 179 CINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 111/264 (42%), Gaps = 40/264 (15%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFLG- 140
+N V+G G FG V ++VAVK L + E M+E+ +
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 141 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSE--------------- 185
+ H+N+V L+G C L++EY G + YL K E
Sbjct: 105 LGSHENIVNLLGACTLSG----PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRL 160
Query: 186 ------TILTWAMRLKIAQDAARGLAYLHEGMDFQIIV-RDFKSSNILLDEQWNAKLSDF 238
+LT+ L A A+G+ +L +F+ V RD + N+L+ K+ DF
Sbjct: 161 EEEEDLNVLTFEDLLCFAYQVAKGMEFL----EFKSCVHRDLAARNVLVTHGKVVKICDF 216
Query: 239 GLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRR--- 294
GLAR S+ V + + APE + G +SDVWSYG+ L+E+ + G
Sbjct: 217 GLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP 276
Query: 295 --PIDRNRPRSEQKLLQWVKPYLS 316
P+D N + Q + +P+ +
Sbjct: 277 GIPVDANFYKLIQNGFKMDQPFYA 300
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK-EWMTEVNFLGIVEHQNLVKLV 151
+G G FG V KG + + +K K E + E N + +++ +V+++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSP----KSETILTWAMRLKIAQDAARGLAYL 207
G C + +LV E G +++YL K + I+ ++ + G+ YL
Sbjct: 79 GICEAE-----SWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKYL 127
Query: 208 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAAPE 266
E + RD + N+LL Q AK+SDFGL++ L E + T + + APE
Sbjct: 128 EES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 184
Query: 267 YVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
+ + +++SDVWS+GV ++E + G++P
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE----WMT-E 135
K ++F ++GEG F V + + + E A+K L +R KE ++T E
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRE 59
Query: 136 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
+ + ++H VKL + DDE+ L Y NG + +Y+ K + R
Sbjct: 60 RDVMSRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFY 114
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTA 255
A+ + L YLH II RD K NILL+E + +++DFG A++ E +
Sbjct: 115 TAEIVS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 170
Query: 256 VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
VGT Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 171 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 132/295 (44%), Gaps = 47/295 (15%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFLGIVEHQNLVK 149
+G+G FG VY+G ++ + VAVK + +E ++ E + + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLS---PKSET-----ILTWAMRLKIAQDAA 201
L+G + +G L+V E M +G + YL P++E T +++A + A
Sbjct: 85 LLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
G+AYL+ + + RD + N ++ + K+ DFG+ R + +
Sbjct: 141 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPY--LSDAK 319
+ APE ++ G SD+WS+GV L+E+ + +EQ PY LS+ +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQ-------PYQGLSNEQ 240
Query: 320 QFRQIVDPRLEGKY---SLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVD 371
+ ++D G Y +++ + +C N + RP LE+VN + D
Sbjct: 241 VLKFVMD----GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTF---LEIVNLLKD 288
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 100/227 (44%), Gaps = 22/227 (9%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR----RGGHKE 131
T A+ + N+ IG+G F V K + EVAVK + + ++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKV-----KLARHILTGKEVAVKIIDKTQLNSSSLQK 59
Query: 132 WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWA 191
EV + ++ H N+VKL + + E+ + LV EY G V YL A
Sbjct: 60 LFREVRIMKVLNHPNIVKL--FEVIETEKTL--YLVMEYASGGEVFDYLVAHGRMKEKEA 115
Query: 192 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 251
R K Q + + Y H+ I+ RD K+ N+LLD N K++DFG + F +
Sbjct: 116 -RAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGN 167
Query: 252 VSTAVVGTMGYAAPEYVQTGRL-AARSDVWSYGVFLYELITGRRPID 297
G+ YAAPE Q + DVWS GV LY L++G P D
Sbjct: 168 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE----WMT-E 135
K ++F ++GEG F V + + + E A+K L +R KE ++T E
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRE 58
Query: 136 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
+ + ++H VKL + DDE+ L Y NG + +Y+ K + R
Sbjct: 59 RDVMSRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFY 113
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTA 255
A+ + L YLH II RD K NILL+E + +++DFG A++ E +
Sbjct: 114 TAEIVS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 169
Query: 256 VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
VGT Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 170 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 100/227 (44%), Gaps = 22/227 (9%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR----RGGHKE 131
T A+ + N+ IG+G F V K + EVAVK + + ++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKV-----KLARHILTGKEVAVKIIDKTQLNSSSLQK 59
Query: 132 WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWA 191
EV + ++ H N+VKL + + E+ + LV EY G V YL A
Sbjct: 60 LFREVRIMKVLNHPNIVKL--FEVIETEKTL--YLVMEYASGGEVFDYLVAHGRMKEKEA 115
Query: 192 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 251
R K Q + + Y H+ I+ RD K+ N+LLD N K++DFG + F +
Sbjct: 116 -RAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGN 167
Query: 252 VSTAVVGTMGYAAPEYVQTGRL-AARSDVWSYGVFLYELITGRRPID 297
G+ YAAPE Q + DVWS GV LY L++G P D
Sbjct: 168 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK-EWMTEVNFLGIVEHQNLVKLV 151
+G G FG V KG + + +K K E + E N + +++ +V+++
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSP----KSETILTWAMRLKIAQDAARGLAYL 207
G C + +LV E G +++YL K + I+ ++ + G+ YL
Sbjct: 437 GICEAES-----WMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKYL 485
Query: 208 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAAPE 266
E + RD + N+LL Q AK+SDFGL++ L E + T + + APE
Sbjct: 486 EES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 542
Query: 267 YVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
+ + +++SDVWS+GV ++E + G++P
Sbjct: 543 CINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 27/219 (12%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGGHKEW---MTEVNFLGIV-EHQN 146
+GEG FG V + + + + P + V VAVK L ++ ++E+ + ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--------------SETILTWAM 192
++ L+G C D + + EY G++ +YL + E +T+
Sbjct: 103 IINLLGACTQDGPLYV----IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 193 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
+ ARG+ YL + I RD + N+L+ E K++DFGLAR + +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 253 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+T + + APE + +SDVWS+GV ++E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 133/308 (43%), Gaps = 47/308 (15%)
Query: 85 KNFSRSVVIGEGGFGCVYKGL-IKNSEDPSQKVEVAVKQLGRRG--GHKEW---MTEVNF 138
K FS IG G FG VY ++NSE VA+K++ G +++W + EV F
Sbjct: 15 KLFSDLREIGHGSFGAVYFARDVRNSE------VVAIKKMSYSGKQSNEKWQDIIKEVRF 68
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQ---YLSPKSETILTWAMRLK 195
L + H N ++ G R LV EY + D + P E +
Sbjct: 69 LQKLRHPNTIQYRGCYL----REHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-----A 119
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVST 254
+ A +GLAYLH +I RD K+ NILL E KL DFG A + P+ F
Sbjct: 120 VTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF----- 171
Query: 255 AVVGTMGYAAPEYV---QTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPRSEQKLLQW 310
VGT + APE + G+ + DVWS G+ EL + P+ + N + + Q
Sbjct: 172 --VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN 229
Query: 311 VKPYLSD---AKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVN 367
P L ++ FR VD L+ R S++ L R RP + +++++
Sbjct: 230 ESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVL----RERPP-TVIMDLIQ 284
Query: 368 KIVDASAE 375
+ DA E
Sbjct: 285 RTKDAVRE 292
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 93 IGEGGFG--CVYKGLIKNSEDPSQKVEVAVKQ-LGRRGGHKEWMTEVNFLGIVEHQNLVK 149
IG+G FG C+ + KN ++ KQ R + E+ + +EH LV
Sbjct: 23 IGKGSFGKVCIVQ---KNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVN 79
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSP----KSETILTWAMRLKIAQDAARGLA 205
L Y D+E +V + + G + +L K ET+ + L +A D
Sbjct: 80 L-WYSFQDEE---DMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALD------ 129
Query: 206 YLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAP 265
YL +II RD K NILLDE + ++DF +A + P E T ++T + GT Y AP
Sbjct: 130 YLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE--TQITT-MAGTKPYMAP 183
Query: 266 EYVQTGRLAARS---DVWSYGVFLYELITGRRP 295
E + + A S D WS GV YEL+ GRRP
Sbjct: 184 EMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMT-EVNFLGIVEHQNLVKLV 151
+GEG G V + + +E + V V + + R E + E+ ++ H+N+VK
Sbjct: 14 LGEGAAGEVQLAVNRVTE---EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G+ E IQ L + EY G + + P A R G+ YLH
Sbjct: 71 GH---RREGNIQYLFL-EYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH--- 121
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
I RD K N+LLDE+ N K+SDFGLA + + + GT+ Y APE ++
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 272 RLAARS-DVWSYGVFLYELITGRRPIDR 298
A DVWS G+ L ++ G P D+
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK-EWMTEVNFLGIVEHQNLVKLV 151
+G G FG V KG + + +K K E + E N + +++ +V+++
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSP----KSETILTWAMRLKIAQDAARGLAYL 207
G C + +LV E G +++YL K + I+ ++ + G+ YL
Sbjct: 438 GICEAES-----WMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKYL 486
Query: 208 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAAPE 266
E + RD + N+LL Q AK+SDFGL++ L E + T + + APE
Sbjct: 487 EES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE 543
Query: 267 YVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
+ + +++SDVWS+GV ++E + G++P
Sbjct: 544 CINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 18/210 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFLGIVEHQNLVK 149
+G+G FG VY+G ++ + VAVK + +E ++ E + + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLS---PKSET-----ILTWAMRLKIAQDAA 201
L+G + +G L+V E M +G + YL P++E T +++A + A
Sbjct: 85 LLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
G+AYL+ + + RD + N ++ + K+ DFG+ R + +
Sbjct: 141 DGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+ APE ++ G SD+WS+GV L+E+ +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 184 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL 243
+E +T +++ DA + L + H+ II RD K +NIL+ K+ DFG+AR
Sbjct: 109 TEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARA 165
Query: 244 GPSEGFTHVSTA-VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPR 302
G + TA V+GT Y +PE + + ARSDV+S G LYE++TG P + P
Sbjct: 166 IADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
Query: 303 S 303
S
Sbjct: 226 S 226
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 184 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL 243
+E +T +++ DA + L + H+ II RD K +NI++ K+ DFG+AR
Sbjct: 109 TEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARA 165
Query: 244 GPSEGFTHVSTA-VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPR 302
G + TA V+GT Y +PE + + ARSDV+S G LYE++TG P + P
Sbjct: 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPD 225
Query: 303 S 303
S
Sbjct: 226 S 226
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 103/236 (43%), Gaps = 25/236 (10%)
Query: 133 MTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS--PKSETILTW 190
++EVN L ++H N+V+ Y D +V EY G + ++ K L
Sbjct: 53 VSEVNLLRELKHPNIVRY--YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDE 110
Query: 191 AMRLKIAQDAARGLAYLHEGMD--FQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG 248
L++ L H D ++ RD K +N+ LD + N KL DFGLAR+ +
Sbjct: 111 EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD- 169
Query: 249 FTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLL 308
T + A VGT Y +PE + +SD+WS G LYEL P S+++L
Sbjct: 170 -TSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT---AFSQKEL- 224
Query: 309 QWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
A + R+ R+ +YS L ++ + NL RP + E+LE
Sbjct: 225 ---------AGKIREGKFRRIPYRYSDELNEIITRMLNL----KDYHRPSVEEILE 267
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 99/227 (43%), Gaps = 22/227 (9%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR----RGGHKE 131
T A+ + N+ IG+G F V K + EVAVK + + ++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKV-----KLARHILTGKEVAVKIIDKTQLNSSSLQK 59
Query: 132 WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWA 191
EV ++ H N+VKL + + E+ + LV EY G V YL A
Sbjct: 60 LFREVRIXKVLNHPNIVKL--FEVIETEKTL--YLVXEYASGGEVFDYLVAHGRXKEKEA 115
Query: 192 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 251
R K Q + + Y H+ I+ RD K+ N+LLD N K++DFG + F +
Sbjct: 116 -RAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSN---EFTFGN 167
Query: 252 VSTAVVGTMGYAAPEYVQTGRL-AARSDVWSYGVFLYELITGRRPID 297
A G YAAPE Q + DVWS GV LY L++G P D
Sbjct: 168 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 103/217 (47%), Gaps = 19/217 (8%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE----WMT-EVNFL 139
++F ++GEG F V + + + E A+K L +R KE ++T E + +
Sbjct: 32 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 86
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 87 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGCLLKYIR-KIGSFDETCTRFYTAEI 141
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 259
+ L YLH II RD K NILL+E + +++DFG A++ E + + VGT
Sbjct: 142 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 260 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
Y +PE + + SD+W+ G +Y+L+ G P
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 19/217 (8%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE----WMT-EVNFL 139
++F ++GEG F V + + + E A+K L +R KE ++T E + +
Sbjct: 29 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 83
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 84 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 138
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 259
+ L YLH II RD K NILL+E + +++DFG A++ E + + VGT
Sbjct: 139 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 260 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 27/219 (12%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGGHKEW---MTEVNFLGIV-EHQN 146
+GEG FG V + + + + P + V VAVK L K+ ++E+ + ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--------------SETILTWAM 192
++ L+G C D + + Y G++ +YL + E +T+
Sbjct: 103 IINLLGACTQDGPLYV----IVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 193 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
+ ARG+ YL + I RD + N+L+ E K++DFGLAR + +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 253 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+T + + APE + +SDVWS+GV ++E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 19/217 (8%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE----WMT-EVNFL 139
++F ++GEG F V + + + E A+K L +R KE ++T E + +
Sbjct: 33 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 87
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 88 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 142
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 259
+ L YLH II RD K NILL+E + +++DFG A++ E + + VGT
Sbjct: 143 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 260 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 98/221 (44%), Gaps = 30/221 (13%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR----RGGHKEWMTEVNFLGI 141
N+ IG+G F V K + EVAVK + + ++ EV + +
Sbjct: 8 NYRLLKTIGKGNFAKV-----KLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKV 62
Query: 142 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 201
+ H N+VKL + + E+ + LV EY G V YL W M+ K A+
Sbjct: 63 LNHPNIVKL--FEVIETEKTLY--LVMEYASGGEVFDYLVAHG-----W-MKEKEARAKF 112
Query: 202 R----GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
R + Y H+ I+ RD K+ N+LLD N K++DFG + F +
Sbjct: 113 RQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNKLDTFC 166
Query: 258 GTMGYAAPEYVQTGRL-AARSDVWSYGVFLYELITGRRPID 297
G+ YAAPE Q + DVWS GV LY L++G P D
Sbjct: 167 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 184 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL 243
+E +T +++ DA + L + H+ II RD K +NI++ K+ DFG+AR
Sbjct: 109 TEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARA 165
Query: 244 GPSEGFTHVSTA-VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPR 302
G + TA V+GT Y +PE + + ARSDV+S G LYE++TG P + P
Sbjct: 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
Query: 303 S 303
S
Sbjct: 226 S 226
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 184 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL 243
+E +T +++ DA + L + H+ II RD K +NI++ K+ DFG+AR
Sbjct: 109 TEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARA 165
Query: 244 GPSEGFTHVSTA-VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPR 302
G + TA V+GT Y +PE + + ARSDV+S G LYE++TG P + P
Sbjct: 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
Query: 303 S 303
S
Sbjct: 226 S 226
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 184 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL 243
+E +T +++ DA + L + H+ II RD K +NI++ K+ DFG+AR
Sbjct: 109 TEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARA 165
Query: 244 GPSEGFTHVSTA-VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPR 302
G + TA V+GT Y +PE + + ARSDV+S G LYE++TG P + P
Sbjct: 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
Query: 303 S 303
S
Sbjct: 226 S 226
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE----WMT-EVNFL 139
++F ++GEG F V + + + E A+K L +R KE ++T E + +
Sbjct: 14 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 68
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 69 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 123
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 259
+ L YLH II RD K NILL+E + +++DFG A++ E + VGT
Sbjct: 124 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 260 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 129/286 (45%), Gaps = 35/286 (12%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR---RGGHKEWMTEVNFLGIVEHQNLV 148
VIG G +++ + +K +VA+K++ + E + E+ + H N+V
Sbjct: 22 VIGSGA-----TAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 76
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSV---DQYLSPKSET---ILTWAMRLKIAQDAAR 202
DE LV + + GSV +++ K E +L + I ++
Sbjct: 77 SYYTSFVVKDEL----WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 132
Query: 203 GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG---FTHVSTAVVGT 259
GL YLH+ I RD K+ NILL E + +++DFG++ + G V VGT
Sbjct: 133 GLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 260 MGYAAPEYVQTGR-LAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL-LQWVKPYLSD 317
+ APE ++ R ++D+WS+G+ EL TG P + P L LQ P L
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET 249
Query: 318 AKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 363
Q ++++ + GK +++S LCL K+ RP +E+L
Sbjct: 250 GVQDKEML--KKYGKSFRKMIS-------LCLQKDPEKRPTAAELL 286
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 100/227 (44%), Gaps = 22/227 (9%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR----RGGHKE 131
T A+ + N+ IG+G F V K + EVAV+ + + ++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKV-----KLARHILTGKEVAVRIIDKTQLNSSSLQK 59
Query: 132 WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWA 191
EV + ++ H N+VKL + + E+ + LV EY G V YL A
Sbjct: 60 LFREVRIMKVLNHPNIVKL--FEVIETEKTL--YLVMEYASGGEVFDYLVAHGRMKEKEA 115
Query: 192 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 251
R K Q + + Y H+ I+ RD K+ N+LLD N K++DFG + F +
Sbjct: 116 -RAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGN 167
Query: 252 VSTAVVGTMGYAAPEYVQTGRL-AARSDVWSYGVFLYELITGRRPID 297
G+ YAAPE Q + DVWS GV LY L++G P D
Sbjct: 168 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 12/207 (5%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEV-AVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKL 150
IGEG FG V++G+ + E+P+ V + K ++++ E + +H ++VKL
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
+G ++ I L G + +L + + L A + A + LAYL
Sbjct: 77 IGVITENPVWIIMELCTL-----GELRSFLQVRKYS-LDLASLILYAYQLSTALAYLESK 130
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 270
+ + RD + N+L+ KL DFGL+R + S + + + APE +
Sbjct: 131 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINF 186
Query: 271 GRLAARSDVWSYGVFLYE-LITGRRPI 296
R + SDVW +GV ++E L+ G +P
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE----WMT-EVNFL 139
++F ++GEG F V + + + E A+K L +R KE ++T E + +
Sbjct: 29 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 83
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 84 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 138
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 259
+ L YLH II RD K NILL+E + +++DFG A++ E + VGT
Sbjct: 139 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 260 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 129/286 (45%), Gaps = 35/286 (12%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR---RGGHKEWMTEVNFLGIVEHQNLV 148
VIG G +++ + +K +VA+K++ + E + E+ + H N+V
Sbjct: 17 VIGSGA-----TAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 71
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSV---DQYLSPKSET---ILTWAMRLKIAQDAAR 202
DE LV + + GSV +++ K E +L + I ++
Sbjct: 72 SYYTSFVVKDEL----WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 127
Query: 203 GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG---FTHVSTAVVGT 259
GL YLH+ I RD K+ NILL E + +++DFG++ + G V VGT
Sbjct: 128 GLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 260 MGYAAPEYVQTGR-LAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL-LQWVKPYLSD 317
+ APE ++ R ++D+WS+G+ EL TG P + P L LQ P L
Sbjct: 185 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLET 244
Query: 318 AKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 363
Q ++++ + GK +++S LCL K+ RP +E+L
Sbjct: 245 GVQDKEML--KKYGKSFRKMIS-------LCLQKDPEKRPTAAELL 281
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE----WMT-EVNFL 139
++F ++GEG F V + + + E A+K L +R KE ++T E + +
Sbjct: 32 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 86
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 87 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 141
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 259
+ L YLH II RD K NILL+E + +++DFG A++ E + VGT
Sbjct: 142 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 260 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 91/180 (50%), Gaps = 17/180 (9%)
Query: 126 RGGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQY--LSPK 183
RG ++ E+ L ++H N+VKLV D +E + +V+E + G V + L P
Sbjct: 77 RGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHL--YMVFELVNQGPVMEVPTLKPL 134
Query: 184 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL 243
SE + QD +G+ YLH +II RD K SN+L+ E + K++DFG++
Sbjct: 135 SEDQARFYF-----QDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSN- 185
Query: 244 GPSEGFTHVSTAVVGTMGYAAPEYVQTGR--LAARS-DVWSYGVFLYELITGRRPIDRNR 300
+G + + VGT + APE + R + ++ DVW+ GV LY + G+ P R
Sbjct: 186 -EFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 184 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL 243
+E +T +++ DA + L + H+ II RD K +NI++ K+ DFG+AR
Sbjct: 126 TEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARA 182
Query: 244 GPSEGFTHVSTA-VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPR 302
G + TA V+GT Y +PE + + ARSDV+S G LYE++TG P + P
Sbjct: 183 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 242
Query: 303 S 303
S
Sbjct: 243 S 243
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE----WMT-EVNFL 139
++F ++GEG F V + + + E A+K L +R KE ++T E + +
Sbjct: 30 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 84
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 85 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 139
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 259
+ L YLH II RD K NILL+E + +++DFG A++ E + VGT
Sbjct: 140 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 260 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE----WMT-EVNFL 139
++F ++GEG F V + + + E A+K L +R KE ++T E + +
Sbjct: 30 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 84
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 85 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 139
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 259
+ L YLH II RD K NILL+E + +++DFG A++ E + VGT
Sbjct: 140 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 260 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 100/227 (44%), Gaps = 22/227 (9%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR----RGGHKE 131
T A+ + N+ IG+G F V K + EVAV+ + + ++
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKV-----KLARHILTGKEVAVRIIDKTQLNSSSLQK 59
Query: 132 WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWA 191
EV + ++ H N+VKL + + E+ + LV EY G V YL A
Sbjct: 60 LFREVRIMKVLNHPNIVKL--FEVIETEKTL--YLVMEYASGGEVFDYLVAHGRMKEKEA 115
Query: 192 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 251
R K Q + + Y H+ I+ RD K+ N+LLD N K++DFG + F +
Sbjct: 116 -RAKFRQIVS-AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGN 167
Query: 252 VSTAVVGTMGYAAPEYVQTGRL-AARSDVWSYGVFLYELITGRRPID 297
G+ YAAPE Q + DVWS GV LY L++G P D
Sbjct: 168 KLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 44/220 (20%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVEHQNLV- 148
IGEG +G ++ ++ D KV VA+K++ + + + E+ L H+N++
Sbjct: 33 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIG 87
Query: 149 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
K V D E + +LL +++ N + +L
Sbjct: 88 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 132
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 254
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 133 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 255 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 127/300 (42%), Gaps = 43/300 (14%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFL-GIVEHQNLV 148
+G G FG V + + + VAVK L H E M+E+ L I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY-- 206
L+G C + G +++ E+ G++ YL K + + K + Y
Sbjct: 95 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSF 151
Query: 207 -LHEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTM 260
+ +GM+F + I RD + NILL E+ K+ DFGLAR + + A + +
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-PL 210
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQWVKPY 314
+ APE + +SDVWS+GV L+E+ + G P ID R ++ + P
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 270
Query: 315 LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDASA 374
+ + ++ ++D C RP SE++E + ++ A+A
Sbjct: 271 YTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLLQANA 309
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 103/219 (47%), Gaps = 27/219 (12%)
Query: 93 IGEGGFGCVY--KGLIKNSEDPSQKVEVAVKQLGRRGGHKEW---MTEVNFLGIV-EHQN 146
+GEG FG V + + + + P + V VAVK L K+ ++E+ + ++ +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK--------------SETILTWAM 192
++ L+G C D + + Y G++ +YL + E +T+
Sbjct: 103 IINLLGACTQDGPLYV----IVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 193 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
+ ARG+ YL + I RD + N+L+ E K++DFGLAR + +
Sbjct: 159 LVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 253 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+T + + APE + +SDVWS+GV ++E+ T
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE----WMT-EVNFL 139
++F ++GEG F V + + + E A+K L +R KE ++T E + +
Sbjct: 33 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 87
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 88 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 142
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 259
+ L YLH II RD K NILL+E + +++DFG A++ E + VGT
Sbjct: 143 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 260 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE----WMT-EVNFL 139
++F ++GEG F V + + + E A+K L +R KE ++T E + +
Sbjct: 32 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 86
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 87 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 141
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 259
+ L YLH II RD K NILL+E + +++DFG A++ E + VGT
Sbjct: 142 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 260 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK-EWMTEVNFLGIVEHQNLVKLV 151
+G G FG V KG + + +K K E + E N + +++ +V+++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSP----KSETILTWAMRLKIAQDAARGLAYL 207
G C + +LV E G +++YL K + I+ ++ + G+ YL
Sbjct: 79 GICEAE-----SWMLVMEMAELGPLNKYLQQNRHVKDKNII------ELVHQVSMGMKYL 127
Query: 208 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAAPE 266
E + RD + N+LL Q AK+SDFGL++ L E T + + APE
Sbjct: 128 EES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPE 184
Query: 267 YVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
+ + +++SDVWS+GV ++E + G++P
Sbjct: 185 CINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE----WMT-EVNFL 139
++F ++GEG F V + + + E A+K L +R KE ++T E + +
Sbjct: 32 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 86
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 87 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 141
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 259
+ L YLH II RD K NILL+E + +++DFG A++ E + VGT
Sbjct: 142 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 260 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE----WMT-EVNFL 139
++F ++GEG F V + + + E A+K L +R KE ++T E + +
Sbjct: 35 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 89
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 90 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 144
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 259
+ L YLH II RD K NILL+E + +++DFG A++ E + VGT
Sbjct: 145 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 260 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 106/232 (45%), Gaps = 25/232 (10%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEW-MTEVNFLGIVEH 144
+F+ +V+G+G FG V K +E+ +++ K + + E M E L +++
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEE-LYAIKILKKDVVIQDDDVECTMVEKRVLALLDK 78
Query: 145 QNLVKLVGYCADDDERGIQRL-LVYEYMPNGS----VDQYLSPKSETILTWAMRLKIAQD 199
+ + C + + RL V EY+ G + Q K + +A + I
Sbjct: 79 PPFLTQLHSCF----QTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISI--- 131
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 259
GL +LH+ II RD K N++LD + + K++DFG+ + +G T + GT
Sbjct: 132 ---GLFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVT--TREFCGT 183
Query: 260 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 311
Y APE + D W+YGV LYE++ G+ P D E +L Q +
Sbjct: 184 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDG---EDEDELFQSI 232
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 97/219 (44%), Gaps = 26/219 (11%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KEWMTEVNFLGI 141
N+ IG+G F V K + EVAVK + + + ++ EV + I
Sbjct: 16 NYRLQKTIGKGNFAKV-----KLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKI 70
Query: 142 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 201
+ H N+VKL + + E+ + LV EY G V YL A R K Q
Sbjct: 71 LNHPNIVKL--FEVIETEKTL--YLVMEYASGGEVFDYLVAHGRMKEKEA-RAKFRQ-IV 124
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT--HVSTAVVGT 259
+ Y H+ I+ RD K+ N+LLD N K++DFG S FT + G+
Sbjct: 125 SAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGF-----SNEFTVGNKLDTFCGS 176
Query: 260 MGYAAPEYVQTGRL-AARSDVWSYGVFLYELITGRRPID 297
YAAPE Q + DVWS GV LY L++G P D
Sbjct: 177 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 127/300 (42%), Gaps = 43/300 (14%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFL-GIVEHQNLV 148
+G G FG V + + + VAVK L H E M+E+ L I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY-- 206
L+G C + G +++ E+ G++ YL K + + K + Y
Sbjct: 95 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSF 151
Query: 207 -LHEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTM 260
+ +GM+F + I RD + NILL E+ K+ DFGLAR + + A + +
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL-PL 210
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQWVKPY 314
+ APE + +SDVWS+GV L+E+ + G P ID R ++ + P
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAPD 270
Query: 315 LSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDASA 374
+ + ++ ++D C RP SE++E + ++ A+A
Sbjct: 271 YTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLLQANA 309
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 44/220 (20%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVEHQNLV- 148
IGEG +G ++ ++ D KV VA+K++ + + + E+ L H+N++
Sbjct: 31 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 85
Query: 149 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
K V D E + +LL +++ N + +L
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 130
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 254
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 131 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 255 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 12/207 (5%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEV-AVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKL 150
IGEG FG V++G+ + E+P+ V + K ++++ E + +H ++VKL
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
+G ++ ++ E G + +L + + L A + A + LAYL
Sbjct: 77 IGVITENPV-----WIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLESK 130
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 270
+ + RD + N+L+ KL DFGL+R + S + + + APE +
Sbjct: 131 ---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINF 186
Query: 271 GRLAARSDVWSYGVFLYE-LITGRRPI 296
R + SDVW +GV ++E L+ G +P
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEV-AVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
IGEG FG V++G+ + E+P+ V + K ++++ E + +H ++VKL+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G ++ ++ E G + +L + + L A + A + LAYL
Sbjct: 458 GVITEN-----PVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLESK- 510
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
+ + RD + N+L+ KL DFGL+R + S + + + APE +
Sbjct: 511 --RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFR 567
Query: 272 RLAARSDVWSYGVFLYE-LITGRRPI 296
R + SDVW +GV ++E L+ G +P
Sbjct: 568 RFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE----WMT-EVNFL 139
++F ++GEG F V + + + E A+K L +R KE ++T E + +
Sbjct: 32 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 86
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 87 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 141
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 259
+ L YLH II RD K NILL+E + +++DFG A++ E + VGT
Sbjct: 142 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 260 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 115/267 (43%), Gaps = 32/267 (11%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRG-----GHKEWMTEVN-FL 139
+F VIG+G FG V K +++V AVK L ++ K M+E N L
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHK-----AEEVFYAVKVLQKKAILKKKEEKHIMSERNVLL 93
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
V+H LV L D + V +Y+ G + +L + L R A +
Sbjct: 94 KNVKHPFLVGLHFSFQTAD----KLYFVLDYINGGELFYHLQ-RERCFLEPRARF-YAAE 147
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVST--AVV 257
A L YLH I+ RD K NILLD Q + L+DFGL + E H ST
Sbjct: 148 IASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCK----ENIEHNSTTSTFC 200
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPRSEQKLLQ---WVKP 313
GT Y APE + D W G LYE++ G P RN +L +KP
Sbjct: 201 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKP 260
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSK 340
++++ R +++ L+ + RL +K
Sbjct: 261 NITNSA--RHLLEGLLQKDRTKRLGAK 285
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 12/207 (5%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEV-AVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKL 150
IGEG FG V++G+ + E+P+ V + K ++++ E + +H ++VKL
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
+G ++ ++ E G + +L + + L A + A + LAYL
Sbjct: 77 IGVITENPV-----WIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAYLESK 130
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 270
+ + RD + N+L+ KL DFGL+R + S + + + APE +
Sbjct: 131 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINF 186
Query: 271 GRLAARSDVWSYGVFLYE-LITGRRPI 296
R + SDVW +GV ++E L+ G +P
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 101/210 (48%), Gaps = 18/210 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFLGIVEHQNLVK 149
+G+G FG VY+G ++ + VAVK + +E ++ E + + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLS---PKSET-----ILTWAMRLKIAQDAA 201
L+G + +G L+V E M +G + YL P++E T +++A + A
Sbjct: 85 LLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
G+AYL+ + + R+ + N ++ + K+ DFG+ R + + +
Sbjct: 141 DGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+ APE ++ G SD+WS+GV L+E+ +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 12/207 (5%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEV-AVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKL 150
IGEG FG V++G+ + E+P+ V + K ++++ E + +H ++VKL
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
+G ++ I L G + +L + + L A + A + LAYL
Sbjct: 74 IGVITENPVWIIMELCTL-----GELRSFLQVRKYS-LDLASLILYAYQLSTALAYLESK 127
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 270
+ + RD + N+L+ KL DFGL+R + S + + + APE +
Sbjct: 128 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINF 183
Query: 271 GRLAARSDVWSYGVFLYE-LITGRRPI 296
R + SDVW +GV ++E L+ G +P
Sbjct: 184 RRFTSASDVWMFGVCMWEILMHGVKPF 210
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 102/236 (43%), Gaps = 25/236 (10%)
Query: 133 MTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS--PKSETILTW 190
++EVN L ++H N+V+ Y D +V EY G + ++ K L
Sbjct: 53 VSEVNLLRELKHPNIVRY--YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDE 110
Query: 191 AMRLKIAQDAARGLAYLHEGMD--FQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG 248
L++ L H D ++ RD K +N+ LD + N KL DFGLAR+ +
Sbjct: 111 EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD- 169
Query: 249 FTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLL 308
T + VGT Y +PE + +SD+WS G LYEL P S+++L
Sbjct: 170 -TSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT---AFSQKEL- 224
Query: 309 QWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
A + R+ R+ +YS L ++ + NL RP + E+LE
Sbjct: 225 ---------AGKIREGKFRRIPYRYSDELNEIITRMLNL----KDYHRPSVEEILE 267
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 101/231 (43%), Gaps = 37/231 (16%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGG-----------HKEWM 133
+N+ ++G G V + + K P+ K E AVK + GG + +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHK----PTCK-EYAVKIIDVTGGGSFSAEEVQELREATL 71
Query: 134 TEVNFLGIVE-HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAM 192
EV+ L V H N+++L D E LV++ M G + YL+ K L+
Sbjct: 72 KEVDILRKVSGHPNIIQL----KDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKE 125
Query: 193 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA-RLGPSEGFTH 251
KI + + LH+ I+ RD K NILLD+ N KL+DFG + +L P E
Sbjct: 126 TRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL-- 180
Query: 252 VSTAVVGTMGYAAPEYVQTGR------LAARSDVWSYGVFLYELITGRRPI 296
+V GT Y APE ++ D+WS GV +Y L+ G P
Sbjct: 181 --RSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 12/207 (5%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEV-AVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKL 150
IGEG FG V++G+ + E+P+ V + K ++++ E + +H ++VKL
Sbjct: 45 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 104
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
+G ++ I L G + +L + + L A + A + LAYL
Sbjct: 105 IGVITENPVWIIMELCTL-----GELRSFLQVRKYS-LDLASLILYAYQLSTALAYLESK 158
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 270
+ + RD + N+L+ KL DFGL+R + S + + + APE +
Sbjct: 159 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINF 214
Query: 271 GRLAARSDVWSYGVFLYE-LITGRRPI 296
R + SDVW +GV ++E L+ G +P
Sbjct: 215 RRFTSASDVWMFGVCMWEILMHGVKPF 241
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 12/207 (5%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEV-AVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKL 150
IGEG FG V++G+ + E+P+ V + K ++++ E + +H ++VKL
Sbjct: 19 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 78
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
+G ++ ++ E G + +L + + L A + A + LAYL
Sbjct: 79 IGVITENP-----VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAYLESK 132
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 270
+ + RD + N+L+ KL DFGL+R + S + + + APE +
Sbjct: 133 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINF 188
Query: 271 GRLAARSDVWSYGVFLYE-LITGRRPI 296
R + SDVW +GV ++E L+ G +P
Sbjct: 189 RRFTSASDVWMFGVCMWEILMHGVKPF 215
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 101/217 (46%), Gaps = 19/217 (8%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE----WMT-EVNFL 139
++F ++GEG F V + + + E A+K L +R KE ++T E + +
Sbjct: 32 EDFKFGKILGEGSFSTVVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 86
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 87 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 141
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 259
+ L YLH II RD K NILL+E + +++DFG A++ E + VGT
Sbjct: 142 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 260 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 18/200 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR---GGHKEWMTEVNFLGIVEHQNLVK 149
IG G FG V+ G ++ + VAVK +++ E L H N+V+
Sbjct: 122 IGRGNFGEVFSGRLR-----ADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVR 176
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
L+G C I V E + G +L + + + L++ DAA G+ YL
Sbjct: 177 LIGVCTQKQPIYI----VMELVQGGDFLTFLRTEGARLRVKTL-LQMVGDAAAGMEYLES 231
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT-MGYAAPEYV 268
I RD + N L+ E+ K+SDFG++R ++G S + + + APE +
Sbjct: 232 KC---CIHRDLAARNCLVTEKNVLKISDFGMSR-EEADGVXAASGGLRQVPVKWTAPEAL 287
Query: 269 QTGRLAARSDVWSYGVFLYE 288
GR ++ SDVWS+G+ L+E
Sbjct: 288 NYGRYSSESDVWSFGILLWE 307
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 100/223 (44%), Gaps = 34/223 (15%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KEWMTEVNFLGI 141
N+ IG+G F V K + EVA+K + + + ++ EV + I
Sbjct: 16 NYRLLKTIGKGNFAKV-----KLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKI 70
Query: 142 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 201
+ H N+VKL + + E+ + L+ EY G V YL + M+ K A+
Sbjct: 71 LNHPNIVKL--FEVIETEKTL--YLIMEYASGGEVFDYL------VAHGRMKEKEARSKF 120
Query: 202 R----GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVST--A 255
R + Y H+ +I+ RD K+ N+LLD N K++DFG S FT A
Sbjct: 121 RQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGF-----SNEFTVGGKLDA 172
Query: 256 VVGTMGYAAPEYVQTGRL-AARSDVWSYGVFLYELITGRRPID 297
G YAAPE Q + DVWS GV LY L++G P D
Sbjct: 173 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 44/220 (20%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVEHQNLV- 148
IGEG +G ++ ++ D KV VA+K++ + + + E+ L H+N++
Sbjct: 33 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 87
Query: 149 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
K V D E + +LL +++ N + +L
Sbjct: 88 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 132
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 254
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 133 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 255 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 12/207 (5%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEV-AVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKL 150
IGEG FG V++G+ + E+P+ V + K ++++ E + +H ++VKL
Sbjct: 22 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 81
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
+G ++ ++ E G + +L + + L A + A + LAYL
Sbjct: 82 IGVITENPV-----WIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAYLESK 135
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 270
+ + RD + N+L+ KL DFGL+R + S + + + APE +
Sbjct: 136 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINF 191
Query: 271 GRLAARSDVWSYGVFLYE-LITGRRPI 296
R + SDVW +GV ++E L+ G +P
Sbjct: 192 RRFTSASDVWMFGVCMWEILMHGVKPF 218
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 101/210 (48%), Gaps = 18/210 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFLGIVEHQNLVK 149
+G+G FG VY+G ++ + VAVK + +E ++ E + + ++V+
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLS---PKSET-----ILTWAMRLKIAQDAA 201
L+G + +G L+V E M +G + YL P++E T +++A + A
Sbjct: 86 LLGVVS----KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
G+AYL+ + + R+ + N ++ + K+ DFG+ R + + +
Sbjct: 142 DGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+ APE ++ G SD+WS+GV L+E+ +
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 44/220 (20%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVEHQNLV- 148
IGEG +G ++ ++ D KV VA+K++ + + + E+ L H+N++
Sbjct: 31 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 85
Query: 149 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
K V D E + +LL +++ N + +L
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 130
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 254
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 131 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 255 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 97/207 (46%), Gaps = 12/207 (5%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEV-AVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKL 150
IGEG FG V++G+ + E+P+ V + K ++++ E + +H ++VKL
Sbjct: 20 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 79
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
+G ++ ++ E G + +L + + L A + A + LAYL
Sbjct: 80 IGVITENP-----VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAYLESK 133
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 270
+ + RD + N+L+ KL DFGL+R + S + + + APE +
Sbjct: 134 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINF 189
Query: 271 GRLAARSDVWSYGVFLYE-LITGRRPI 296
R + SDVW +GV ++E L+ G +P
Sbjct: 190 RRFTSASDVWMFGVCMWEILMHGVKPF 216
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEV-AVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
IGEG FG V++G+ + E+P+ V + K ++++ E + +H ++VKL+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
G ++ ++ E G + +L + + L A + A + LAYL
Sbjct: 458 GVITEN-----PVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLESK- 510
Query: 212 DFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTG 271
+ + RD + N+L+ KL DFGL+R + S + + + APE +
Sbjct: 511 --RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFR 567
Query: 272 RLAARSDVWSYGVFLYE-LITGRRPI 296
R + SDVW +GV ++E L+ G +P
Sbjct: 568 RFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 24/216 (11%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNFLG 140
+NF + IGEG +G VYK K + + VA+K++ G + E++ L
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISLLK 61
Query: 141 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
+ H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 62 ELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL 116
Query: 201 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAVVG 258
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P +TH V
Sbjct: 117 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----EVV 169
Query: 259 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T+ Y APE + + + + D+WS G E++T R
Sbjct: 170 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 24/216 (11%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNFLG 140
+NF + IGEG +G VYK K + + VA+K++ G + E++ L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 141 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
+ H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 58 ELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 201 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAVVG 258
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P +TH V
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----EVV 165
Query: 259 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T+ Y APE + + + + D+WS G E++T R
Sbjct: 166 TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 44/220 (20%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVEHQNLV- 148
IGEG +G ++ ++ D KV VA+K++ + + + E+ L H+N++
Sbjct: 33 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIG 87
Query: 149 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
K V D E + +LL +++ N + +L
Sbjct: 88 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 132
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 254
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 133 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLT 187
Query: 255 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 108/218 (49%), Gaps = 24/218 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNF 138
+ +NF + IGEG +G VYK K + + VA+K++ G + E++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISL 56
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 57 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P +TH
Sbjct: 112 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----E 164
Query: 257 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 44/220 (20%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVEHQNLV- 148
IGEG +G ++ ++ D KV VA+K++ + + + E+ L H+N++
Sbjct: 35 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 89
Query: 149 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
K V D E + +LL +++ N + +L
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFL--------------- 134
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 254
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 135 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 255 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 44/220 (20%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVEHQNLV- 148
IGEG +G ++ ++ D KV VA+K++ + + + E+ L H+N++
Sbjct: 29 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 83
Query: 149 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
K V D E + +LL +++ N + +L
Sbjct: 84 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 128
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 254
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 129 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 255 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 18/200 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR---GGHKEWMTEVNFLGIVEHQNLVK 149
IG G FG V+ G ++ + VAVK +++ E L H N+V+
Sbjct: 122 IGRGNFGEVFSGRLR-----ADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVR 176
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
L+G C I V E + G +L + + + L++ DAA G+ YL
Sbjct: 177 LIGVCTQKQPIYI----VMELVQGGDFLTFLRTEGARLRVKTL-LQMVGDAAAGMEYLES 231
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT-MGYAAPEYV 268
I RD + N L+ E+ K+SDFG++R ++G S + + + APE +
Sbjct: 232 KC---CIHRDLAARNCLVTEKNVLKISDFGMSR-EEADGVYAASGGLRQVPVKWTAPEAL 287
Query: 269 QTGRLAARSDVWSYGVFLYE 288
GR ++ SDVWS+G+ L+E
Sbjct: 288 NYGRYSSESDVWSFGILLWE 307
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 44/220 (20%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVEHQNLV- 148
IGEG +G ++ ++ D KV VA+K++ + + + E+ L H+N++
Sbjct: 35 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIG 89
Query: 149 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
K V D E + +LL +++ N + +L
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 134
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 254
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 135 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 255 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 102/237 (43%), Gaps = 27/237 (11%)
Query: 133 MTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS--PKSETILTW 190
++EVN L ++H N+V+ Y D +V EY G + ++ K L
Sbjct: 53 VSEVNLLRELKHPNIVRY--YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDE 110
Query: 191 AMRLKIAQDAARGLAYLHEGMD--FQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSE 247
L++ L H D ++ RD K +N+ LD + N KL DFGLAR L E
Sbjct: 111 EFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE 170
Query: 248 GFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 307
F + VGT Y +PE + +SD+WS G LYEL P S+++L
Sbjct: 171 DF---AKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT---AFSQKEL 224
Query: 308 LQWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
A + R+ R+ +YS L ++ + NL RP + E+LE
Sbjct: 225 ----------AGKIREGKFRRIPYRYSDELNEIITRMLNL----KDYHRPSVEEILE 267
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 44/220 (20%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVEHQNLV- 148
IGEG +G ++ ++ D KV VA+K++ + + + E+ L H+N++
Sbjct: 39 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 93
Query: 149 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
K V D E + +LL +++ N + +L
Sbjct: 94 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 138
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 254
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 139 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 193
Query: 255 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 194 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 44/220 (20%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVEHQNLV- 148
IGEG +G ++ ++ D KV VA+K++ + + + E+ L H+N++
Sbjct: 31 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 85
Query: 149 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
K V D E + +LL +++ N + +L
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 130
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 254
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 131 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 255 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 44/220 (20%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVEHQNLV- 148
IGEG +G ++ ++ D KV VA+K++ + + + E+ L H+N++
Sbjct: 31 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 85
Query: 149 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
K V D E + +LL +++ N + +L
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 130
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 254
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 131 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 255 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 44/220 (20%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVEHQNLV- 148
IGEG +G ++ ++ D KV VA+K++ + + + E+ L H+N++
Sbjct: 36 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 90
Query: 149 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
K V D E + +LL +++ N + +L
Sbjct: 91 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 135
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 254
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 136 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 190
Query: 255 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 191 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 44/220 (20%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVEHQNLV- 148
IGEG +G ++ ++ D KV VA+K++ + + + E+ L H+N++
Sbjct: 37 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 91
Query: 149 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
K V D E + +LL +++ N + +L
Sbjct: 92 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 136
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 254
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 137 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 191
Query: 255 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 192 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 44/220 (20%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVEHQNLV- 148
IGEG +G ++ ++ D KV VA+K++ + + + E+ L H+N++
Sbjct: 28 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 82
Query: 149 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
K V D E + +LL +++ N + +L
Sbjct: 83 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 127
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 254
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 128 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 182
Query: 255 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 183 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 44/220 (20%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVEHQNLV- 148
IGEG +G ++ ++ D KV VA+K++ + + + E+ L H+N++
Sbjct: 35 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 89
Query: 149 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
K V D E + +LL +++ N + +L
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 134
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 254
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 135 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 255 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 118/293 (40%), Gaps = 25/293 (8%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQ 145
NF IG G F VY+ P +V + L + + E++ L + H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 146 NLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS--PKSETILTWAMRLKIAQDAARG 203
N++K +D+E I V E G + + + K + ++ K
Sbjct: 93 NVIKYYASFIEDNELNI----VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYA 263
L ++H +++ RD K +N+ + KL D GL R S+ T + ++VGT Y
Sbjct: 149 LEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK--TTAAHSLVGTPYYM 203
Query: 264 APEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQ 323
+PE + +SD+WS G LYE+ + P ++ S K+ Q
Sbjct: 204 SPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-----------LYSLCKKIEQ 252
Query: 324 IVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDASAEA 376
P L + +L + N+C+ + RP ++ V ++ ++ +A +
Sbjct: 253 CDYPPLPSDH---YSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASS 302
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 24/216 (11%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNFLG 140
+NF + IGEG +G VYK K + + VA+K++ G + E++ L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 141 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
+ H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 58 ELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 201 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAVVG 258
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P +TH V
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----EVV 165
Query: 259 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T+ Y APE + + + + D+WS G E++T R
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 44/220 (20%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVEHQNLV- 148
IGEG +G ++ ++ D KV VA+K++ + + + E+ L H+N++
Sbjct: 29 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 83
Query: 149 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
K V D E + +LL +++ N + +L
Sbjct: 84 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 128
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 254
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 129 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 255 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 24/216 (11%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNFLG 140
+NF + IGEG +G VYK K + + VA+K++ G + E++ L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISLLK 56
Query: 141 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
+ H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 57 ELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 201 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAVVG 258
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P +TH V
Sbjct: 112 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----EVV 164
Query: 259 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T+ Y APE + + + + D+WS G E++T R
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 24/216 (11%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNFLG 140
+NF + IGEG +G VYK K + + VA+K++ G + E++ L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISLLK 56
Query: 141 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
+ H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 57 ELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 201 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAVVG 258
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P +TH V
Sbjct: 112 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----EVV 164
Query: 259 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T+ Y APE + + + + D+WS G E++T R
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 44/220 (20%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVEHQNLV- 148
IGEG +G ++ ++ D KV VA+K++ + + + E+ L H+N++
Sbjct: 51 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 105
Query: 149 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
K V D E + +LL +++ N + +L
Sbjct: 106 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 150
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 254
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 151 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 205
Query: 255 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 12/207 (5%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEV-AVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKL 150
IGEG FG V++G+ + E+P+ V + K ++++ E + +H ++VKL
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
+G ++ ++ E G + +L + + L A + A + LAYL
Sbjct: 77 IGVITENPV-----WIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLESK 130
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 270
+ + RD + N+L+ KL DFGL+R S + + + APE +
Sbjct: 131 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKL-PIKWMAPESINF 186
Query: 271 GRLAARSDVWSYGVFLYE-LITGRRPI 296
R + SDVW +GV ++E L+ G +P
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 99/222 (44%), Gaps = 23/222 (10%)
Query: 86 NFSRSVVIGEGGFGCVYK----GLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLG 140
N +G G FG V + GL K ED KV V + + KE M+E+ +
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGK--EDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 141 -IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
+ +H+N+V L+G C G L++ EY G + +L KS + T IA
Sbjct: 105 HLGQHENIVNLLGACT----HGGPVLVITEYCCYGDLLNFLRRKSRVLET-DPAFAIANS 159
Query: 200 AARGLAYLH------EGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGF 249
A LH +GM F I RD + N+LL AK+ DFGLAR ++
Sbjct: 160 TASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 219
Query: 250 THVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
V + + APE + +SDVWSYG+ L+E+ +
Sbjct: 220 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 24/216 (11%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNFLG 140
+NF + IGEG +G VYK K + + VA+K++ G + E++ L
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISLLK 64
Query: 141 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
+ H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 65 ELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL 119
Query: 201 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAVVG 258
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P +TH V
Sbjct: 120 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----EVV 172
Query: 259 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T+ Y APE + + + + D+WS G E++T R
Sbjct: 173 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 24/216 (11%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNFLG 140
+NF + IGEG +G VYK K + + VA+K++ G + E++ L
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISLLK 64
Query: 141 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
+ H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 65 ELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL 119
Query: 201 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAVVG 258
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P +TH V
Sbjct: 120 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----EVV 172
Query: 259 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T+ Y APE + + + + D+WS G E++T R
Sbjct: 173 TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 101/220 (45%), Gaps = 23/220 (10%)
Query: 86 NFSRSVVIGEGGFGCVYK----GLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLG 140
N +G G FG V + GL K ED KV V + + KE M+E+ +
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGK--EDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 141 -IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILT------WAMR 193
+ +H+N+V L+G C G L++ EY G + +L K+E L +R
Sbjct: 105 HLGQHENIVNLLGACT----HGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELR 160
Query: 194 --LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 251
L + A+G+A+L I RD + N+LL AK+ DFGLAR ++
Sbjct: 161 DLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 217
Query: 252 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
V + + APE + +SDVWSYG+ L+E+ +
Sbjct: 218 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 100/231 (43%), Gaps = 37/231 (16%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGG-----------HKEWM 133
+N+ ++G G V + + K P+ K E AVK + GG + +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHK----PTCK-EYAVKIIDVTGGGSFSAEEVQELREATL 71
Query: 134 TEVNFLGIVE-HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAM 192
EV+ L V H N+++L D E LV++ M G + YL+ K L+
Sbjct: 72 KEVDILRKVSGHPNIIQL----KDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKE 125
Query: 193 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA-RLGPSEGFTH 251
KI + + LH+ I+ RD K NILLD+ N KL+DFG + +L P E
Sbjct: 126 TRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE 182
Query: 252 VSTAVVGTMGYAAPEYVQTGR------LAARSDVWSYGVFLYELITGRRPI 296
V GT Y APE ++ D+WS GV +Y L+ G P
Sbjct: 183 VC----GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 103/225 (45%), Gaps = 24/225 (10%)
Query: 86 NFSRSVVIGEGGFGCVYK----GLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLG 140
N +G G FG V + GL K ED KV V + + KE M+E+ +
Sbjct: 39 NLQFGKTLGAGAFGKVVEATAFGLGK--EDAVLKVAVKMLKSTAHADEKEALMSELKIMS 96
Query: 141 -IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILT------WAMR 193
+ +H+N+V L+G C G L++ EY G + +L K+E L +R
Sbjct: 97 HLGQHENIVNLLGACT----HGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELR 152
Query: 194 --LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTH 251
L + A+G+A+L I RD + N+LL AK+ DFGLAR ++
Sbjct: 153 DLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 209
Query: 252 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
V + + APE + +SDVWSYG+ L+E+ + G P
Sbjct: 210 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 254
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 44/220 (20%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVEHQNLV- 148
IGEG +G ++ ++ D KV VA+K++ + + + E+ L H+N++
Sbjct: 31 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 85
Query: 149 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
K V D E + +LL +++ N + +L
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 130
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 254
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 131 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLT 185
Query: 255 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 24/216 (11%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNFLG 140
+NF + IGEG +G VYK K + + VA+K++ G + E++ L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 141 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
+ H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 58 ELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 201 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAVVG 258
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P +TH V
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----EVV 165
Query: 259 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T+ Y APE + + + + D+WS G E++T R
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 44/220 (20%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVEHQNLV- 148
IGEG +G ++ ++ D KV VA+K++ + + + E+ L H+N++
Sbjct: 35 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 89
Query: 149 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
K V D E + +LL +++ N + +L
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 134
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 254
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 135 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 255 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 19/217 (8%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE----WMT-EVNFL 139
++F ++GEG F + + + E A+K L +R KE ++T E + +
Sbjct: 30 EDFKFGKILGEGSFSTTVL-----ARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 84
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
++H VKL + DDE+ L Y NG + +Y+ K + R A+
Sbjct: 85 SRLDHPFFVKLY-FTFQDDEKLYFGL---SYAKNGELLKYIR-KIGSFDETCTRFYTAEI 139
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT 259
+ L YLH II RD K NILL+E + +++DFG A++ E + VGT
Sbjct: 140 VS-ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 260 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
Y +PE + SD+W+ G +Y+L+ G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 97/211 (45%), Gaps = 27/211 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVE-HQNLVKLV 151
+GEG F K + K S AVK + +R E+ L + E H N+VKL
Sbjct: 19 LGEGSFSICRKCVHKKSNQA-----FAVKIISKRM-EANTQKEITALKLCEGHPNIVKLH 72
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPK---SETILTWAMRLKIAQDAARGLAYLH 208
D + LV E + G + + + K SET ++ MR ++ ++++H
Sbjct: 73 EVFHDQ----LHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVS-----AVSHMH 123
Query: 209 EGMDFQIIVRDFKSSNILL-DEQWN--AKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAP 265
D ++ RD K N+L DE N K+ DFG ARL P + + T T+ YAAP
Sbjct: 124 ---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-QPLKTPCF-TLHYAAP 178
Query: 266 EYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
E + D+WS GV LY +++G+ P
Sbjct: 179 ELLNQNGYDESCDLWSLGVILYTMLSGQVPF 209
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 127/303 (41%), Gaps = 44/303 (14%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFL-GIVEHQNLV 148
+G G FG V + + + VAVK L H E M+E+ L I H N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD---AARGLA 205
L+G C + G +++ E+ G++ YL K + + + +D +
Sbjct: 96 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLIC 152
Query: 206 Y---LHEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVG 258
Y + +GM+F + I RD + NILL E+ K+ DFGLAR +
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 259 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQWVK 312
+ + APE + +SDVWS+GV L+E+ + G P ID R ++ +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 272
Query: 313 PYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDA 372
P + + ++ ++D C RP SE++E + ++ A
Sbjct: 273 PDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLLQA 311
Query: 373 SAE 375
+A+
Sbjct: 312 NAQ 314
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 100/231 (43%), Gaps = 37/231 (16%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGG-----------HKEWM 133
+N+ ++G G V + + K P+ K E AVK + GG + +
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHK----PTCK-EYAVKIIDVTGGGSFSAEEVQELREATL 58
Query: 134 TEVNFLGIVE-HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAM 192
EV+ L V H N+++L D E LV++ M G + YL+ K L+
Sbjct: 59 KEVDILRKVSGHPNIIQL----KDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKE 112
Query: 193 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA-RLGPSEGFTH 251
KI + + LH+ I+ RD K NILLD+ N KL+DFG + +L P E
Sbjct: 113 TRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE 169
Query: 252 VSTAVVGTMGYAAPEYVQTGR------LAARSDVWSYGVFLYELITGRRPI 296
V GT Y APE ++ D+WS GV +Y L+ G P
Sbjct: 170 VC----GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 129/305 (42%), Gaps = 47/305 (15%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFL-GIVEHQNLV 148
+G G FG V + + + VAVK L H E M+E+ L I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL- 207
L+G C + G +++ E+ G++ YL K + + + + L +L
Sbjct: 95 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 208 ------HEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAV 256
+GM+F + I RD + NILL E+ K+ DFGLAR + + A
Sbjct: 152 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 257 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQW 310
+ + + APE + +SDVWS+GV L+E+ + G P ID R ++ +
Sbjct: 212 L-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 270
Query: 311 VKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 370
P + + ++ ++D C RP SE++E + ++
Sbjct: 271 RAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLL 309
Query: 371 DASAE 375
A+A+
Sbjct: 310 QANAQ 314
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 20/211 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQK-VEVAVK-----QLGRRGGHKEWMTEVNFLGIVEHQN 146
+G+G FG V +G + PS K V VAVK L + +++ EVN + ++H+N
Sbjct: 20 LGDGSFGVVRRG---EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 206
L++L G + +V E P GS+ L L + + A A G+ Y
Sbjct: 77 LIRLYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGY 130
Query: 207 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT-MGYAAP 265
L + I RD + N+LL + K+ DFGL R P +V + AP
Sbjct: 131 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 266 EYVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
E ++T + SD W +GV L+E+ T G+ P
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 129/305 (42%), Gaps = 47/305 (15%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFL-GIVEHQNLV 148
+G G FG V + + + VAVK L H E M+E+ L I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL- 207
L+G C + G +++ E+ G++ YL K + + + + L +L
Sbjct: 86 NLLGACT---KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 208 ------HEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAV 256
+GM+F + I RD + NILL E+ K+ DFGLAR + + A
Sbjct: 143 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 257 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQW 310
+ + + APE + +SDVWS+GV L+E+ + G P ID R ++ +
Sbjct: 203 L-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 261
Query: 311 VKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 370
P + + ++ ++D C RP SE++E + ++
Sbjct: 262 RAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLL 300
Query: 371 DASAE 375
A+A+
Sbjct: 301 QANAQ 305
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 80/170 (47%), Gaps = 25/170 (14%)
Query: 135 EVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRL 194
EV + I+ H N+VKL + + E+ + L+ EY G V YL + M+
Sbjct: 61 EVRIMKILNHPNIVKL--FEVIETEKTL--YLIMEYASGGEVFDYL------VAHGRMKE 110
Query: 195 KIAQDAAR----GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
K A+ R + Y H+ +I+ RD K+ N+LLD N K++DFG S FT
Sbjct: 111 KEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGF-----SNEFT 162
Query: 251 HVST--AVVGTMGYAAPEYVQTGRL-AARSDVWSYGVFLYELITGRRPID 297
G+ YAAPE Q + DVWS GV LY L++G P D
Sbjct: 163 VGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 26/208 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNFLGIVEHQNLV 148
+GEG +G VYK SQ VA+K++ G + E++ L + H N+V
Sbjct: 29 VGEGTYGVVYKA------KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
L+ ER + LV+E+M + + L + +++ + Q RG+A+ H
Sbjct: 83 SLIDVI--HSERCLT--LVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQ-LLRGVAHCH 136
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAVVGTMGYAAPE 266
+ +I+ RD K N+L++ KL+DFGLAR G P +TH V T+ Y AP+
Sbjct: 137 Q---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH----EVVTLWYRAPD 189
Query: 267 YVQTGRLAARS-DVWSYGVFLYELITGR 293
+ + + S D+WS G E+ITG+
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 129/305 (42%), Gaps = 47/305 (15%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFL-GIVEHQNLV 148
+G G FG V + + + VAVK L H E M+E+ L I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL- 207
L+G C + G +++ E+ G++ YL K + + + + L +L
Sbjct: 86 NLLGACT---KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 208 ------HEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAV 256
+GM+F + I RD + NILL E+ K+ DFGLAR + + A
Sbjct: 143 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 257 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQW 310
+ + + APE + +SDVWS+GV L+E+ + G P ID R ++ +
Sbjct: 203 L-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 261
Query: 311 VKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 370
P + + ++ ++D C RP SE++E + ++
Sbjct: 262 RAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLL 300
Query: 371 DASAE 375
A+A+
Sbjct: 301 QANAQ 305
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 125/305 (40%), Gaps = 49/305 (16%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFL-GIVEHQNLV 148
+G G FG V + + + VAVK L H E M+E+ L I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS------------ETILTWAMRLKI 196
L+G C + G +++ E+ G++ YL K + LT +
Sbjct: 97 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXY 153
Query: 197 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAV 256
+ A+G+ +L + I RD + NILL E+ K+ DFGLAR +
Sbjct: 154 SFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 257 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQW 310
+ + APE + +SDVWS+GV L+E+ + G P ID R ++ +
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 270
Query: 311 VKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 370
P + + ++ ++D C RP SE++E + ++
Sbjct: 271 RAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLL 309
Query: 371 DASAE 375
A+A+
Sbjct: 310 QANAQ 314
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 20/211 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQK-VEVAVK-----QLGRRGGHKEWMTEVNFLGIVEHQN 146
+G+G FG V +G + PS K V VAVK L + +++ EVN + ++H+N
Sbjct: 16 LGDGSFGVVRRG---EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 206
L++L G + +V E P GS+ L L + + A A G+ Y
Sbjct: 73 LIRLYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGY 126
Query: 207 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT-MGYAAP 265
L + I RD + N+LL + K+ DFGL R P +V + AP
Sbjct: 127 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 266 EYVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
E ++T + SD W +GV L+E+ T G+ P
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 20/211 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQK-VEVAVK-----QLGRRGGHKEWMTEVNFLGIVEHQN 146
+G+G FG V +G + PS K V VAVK L + +++ EVN + ++H+N
Sbjct: 16 LGDGSFGVVRRG---EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 206
L++L G + +V E P GS+ L L + + A A G+ Y
Sbjct: 73 LIRLYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGY 126
Query: 207 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT-MGYAAP 265
L + I RD + N+LL + K+ DFGL R P +V + AP
Sbjct: 127 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
Query: 266 EYVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
E ++T + SD W +GV L+E+ T G+ P
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 104/229 (45%), Gaps = 28/229 (12%)
Query: 86 NFSRSVVIGEGGFGCVYK----GLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLG 140
N +G G FG V + GL K ED KV V + + KE M+E+ +
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGK--EDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 141 -IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKS---ETILTWAMR--- 193
+ +H+N+V L+G C G L++ EY G + +L KS ET +A+
Sbjct: 105 HLGQHENIVNLLGACT----HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANST 160
Query: 194 ------LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 247
L + A+G+A+L I RD + N+LL AK+ DFGLAR ++
Sbjct: 161 LSTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 217
Query: 248 GFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
V + + APE + +SDVWSYG+ L+E+ + G P
Sbjct: 218 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP 266
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 26/208 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNFLGIVEHQNLV 148
+GEG +G VYK SQ VA+K++ G + E++ L + H N+V
Sbjct: 29 VGEGTYGVVYKA------KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
L+ ER + LV+E+M + + L + +++ + Q RG+A+ H
Sbjct: 83 SLIDVI--HSERCLT--LVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQ-LLRGVAHCH 136
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAVVGTMGYAAPE 266
+ +I+ RD K N+L++ KL+DFGLAR G P +TH V T+ Y AP+
Sbjct: 137 Q---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH----EVVTLWYRAPD 189
Query: 267 YVQTGRLAARS-DVWSYGVFLYELITGR 293
+ + + S D+WS G E+ITG+
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 96/220 (43%), Gaps = 44/220 (20%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVEHQNLV- 148
IGEG +G ++ ++ D KV VA++++ + + + E+ L H+N++
Sbjct: 35 IGEGAYG-----MVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIG 89
Query: 149 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
K V D E + +LL +++ N + +L
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 134
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 254
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T T
Sbjct: 135 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 255 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 20/211 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQK-VEVAVK-----QLGRRGGHKEWMTEVNFLGIVEHQN 146
+G+G FG V +G + PS K V VAVK L + +++ EVN + ++H+N
Sbjct: 20 LGDGSFGVVRRG---EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 206
L++L G + +V E P GS+ L L + + A A G+ Y
Sbjct: 77 LIRLYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGY 130
Query: 207 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT-MGYAAP 265
L + I RD + N+LL + K+ DFGL R P +V + AP
Sbjct: 131 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
Query: 266 EYVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
E ++T + SD W +GV L+E+ T G+ P
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 13/224 (5%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQ 145
+FS +IG GGFG VY ++ + K++ + G + E L +V
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 248
Query: 146 NLVKLVGYCADDDERGIQRL-LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 204
+ +V C +L + + M G + +LS + + A A + GL
Sbjct: 249 DCPFIV--CMSYAFHTPDKLSFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGL 304
Query: 205 AYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAA 264
++H ++ RD K +NILLDE + ++SD GLA S+ H S VGT GY A
Sbjct: 305 EHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHGYMA 357
Query: 265 PEYVQTG-RLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 307
PE +Q G + +D +S G L++L+ G P +++ + + ++
Sbjct: 358 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 401
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 16/212 (7%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEH 144
+NF + IGEG +G VYK K + + ++ + G + E++ L + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 204
N+VKL+ ++ + LV+E++ + + +++ + T + + +GL
Sbjct: 62 PNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 205 AYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAVVGTMGY 262
A+ H +++ RD K N+L++ + KL+DFGLAR G P +TH V T+ Y
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----EVVTLWY 169
Query: 263 AAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
APE + + + + D+WS G E++T R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 16/212 (7%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEH 144
+NF + IGEG +G VYK K + + ++ + G + E++ L + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDT-ETEGVPSTAIREISLLKELNH 60
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 204
N+VKL+ ++ + LV+E++ + + +++ + T + + +GL
Sbjct: 61 PNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 205 AYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAVVGTMGY 262
A+ H +++ RD K N+L++ + KL+DFGLAR G P +TH V T+ Y
Sbjct: 116 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----EVVTLWY 168
Query: 263 AAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
APE + + + + D+WS G E++T R
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 129/305 (42%), Gaps = 47/305 (15%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFL-GIVEHQNLV 148
+G G FG V + + + VAVK L H E M+E+ L I H N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL- 207
L+G C + G +++ E+ G++ YL K + + + + L +L
Sbjct: 132 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 188
Query: 208 ------HEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAV 256
+GM+F + I RD + NILL E+ K+ DFGLAR + + A
Sbjct: 189 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 257 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQW 310
+ + + APE + +SDVWS+GV L+E+ + G P ID R ++ +
Sbjct: 249 L-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 307
Query: 311 VKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIV 370
P + + ++ ++D C RP SE++E + ++
Sbjct: 308 RAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLL 346
Query: 371 DASAE 375
A+A+
Sbjct: 347 QANAQ 351
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 13/224 (5%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQ 145
+FS +IG GGFG VY ++ + K++ + G + E L +V
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 146 NLVKLVGYCADDDERGIQRL-LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 204
+ +V C +L + + M G + +LS + + A A + GL
Sbjct: 250 DCPFIV--CMSYAFHTPDKLSFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGL 305
Query: 205 AYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAA 264
++H ++ RD K +NILLDE + ++SD GLA S+ H S VGT GY A
Sbjct: 306 EHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHGYMA 358
Query: 265 PEYVQTG-RLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 307
PE +Q G + +D +S G L++L+ G P +++ + + ++
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 13/224 (5%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQ 145
+FS +IG GGFG VY ++ + K++ + G + E L +V
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 146 NLVKLVGYCADDDERGIQRL-LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 204
+ +V C +L + + M G + +LS + + A A + GL
Sbjct: 250 DCPFIV--CMSYAFHTPDKLSFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGL 305
Query: 205 AYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAA 264
++H ++ RD K +NILLDE + ++SD GLA S+ H S VGT GY A
Sbjct: 306 EHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHGYMA 358
Query: 265 PEYVQTG-RLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 307
PE +Q G + +D +S G L++L+ G P +++ + + ++
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 13/224 (5%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQ 145
+FS +IG GGFG VY ++ + K++ + G + E L +V
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 146 NLVKLVGYCADDDERGIQRL-LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 204
+ +V C +L + + M G + +LS + + A A + GL
Sbjct: 250 DCPFIV--CMSYAFHTPDKLSFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGL 305
Query: 205 AYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAA 264
++H ++ RD K +NILLDE + ++SD GLA S+ H S VGT GY A
Sbjct: 306 EHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHGYMA 358
Query: 265 PEYVQTG-RLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKL 307
PE +Q G + +D +S G L++L+ G P +++ + + ++
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 89/217 (41%), Gaps = 13/217 (5%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLG 140
K +F +G+G FG VY K ++ + QL + G + E+
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 141 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
+ H N++++ Y D + L+ E+ P G + Y + ++
Sbjct: 70 HLRHPNILRMYNYFHDRK----RIYLMLEFAPRGEL--YKELQKHGRFDEQRSATFMEEL 123
Query: 201 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTM 260
A L Y HE ++I RD K N+L+ + K++DFG + PS + GT+
Sbjct: 124 ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR----RRXMCGTL 176
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 297
Y PE ++ + D+W GV YE + G P D
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 107/216 (49%), Gaps = 24/216 (11%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNFLG 140
+NF + IGEG +G VYK K + + VA+K++ G + E++ L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISLLK 57
Query: 141 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
+ H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 58 ELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 201 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAVVG 258
+GL++ H +++ RD K N+L++ + KL+DFGLAR G P +TH V
Sbjct: 113 LQGLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----EVV 165
Query: 259 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T+ Y APE + + + + D+WS G E++T R
Sbjct: 166 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 126/304 (41%), Gaps = 45/304 (14%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFL-GIVEHQNLV 148
+G G FG V + + + VAVK L H E M+E+ L I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL- 207
L+G C + G +++ E+ G++ YL K + + + + L +L
Sbjct: 95 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 208 ------HEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
+GM+F + I RD + NILL E+ K+ DFGLAR +
Sbjct: 152 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQWV 311
+ + APE + +SDVWS+GV L+E+ + G P ID R ++ +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 271
Query: 312 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVD 371
P + + ++ ++D C RP SE++E + ++
Sbjct: 272 APDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLLQ 310
Query: 372 ASAE 375
A+A+
Sbjct: 311 ANAQ 314
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 97/211 (45%), Gaps = 20/211 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQK-VEVAVK-----QLGRRGGHKEWMTEVNFLGIVEHQN 146
+G+G FG V +G + PS K V VAVK L + +++ EVN + ++H+N
Sbjct: 26 LGDGSFGVVRRG---EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 206
L++L G + +V E P GS+ L L + + A A G+ Y
Sbjct: 83 LIRLYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGY 136
Query: 207 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT-MGYAAP 265
L + I RD + N+LL + K+ DFGL R P +V + AP
Sbjct: 137 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 193
Query: 266 EYVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
E ++T + SD W +GV L+E+ T G+ P
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 92/222 (41%), Gaps = 23/222 (10%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVK-----QLGRRGGHKEWMTE 135
K +F +G+G FG VY K + K +A+K QL + G + E
Sbjct: 11 KFTIDDFDIGRPLGKGKFGNVYLAREKQN-----KFIMALKVLFKSQLEKEGVEHQLRRE 65
Query: 136 VNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
+ + H N++++ Y D + L+ E+ P G + Y +
Sbjct: 66 IEIQSHLRHPNILRMYNYFHDRK----RIYLMLEFAPRGEL--YKELQKHGRFDEQRSAT 119
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTA 255
++ A L Y HE ++I RD K N+L+ + K++DFG + PS
Sbjct: 120 FMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR----RRX 172
Query: 256 VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 297
+ GT+ Y PE ++ + D+W GV YE + G P D
Sbjct: 173 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 129/308 (41%), Gaps = 53/308 (17%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFL-GIVEHQNLV 148
+G G FG V + + + VAVK L H E M+E+ L I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
L+G C + G +++ E+ G++ YL K + + + +D + L
Sbjct: 97 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK---EAPEDLYKDFLTLE 150
Query: 209 ----------EGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVS 253
+GM+F + I RD + NILL E+ K+ DFGLAR + +
Sbjct: 151 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 210
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKL 307
A + + + APE + +SDVWS+GV L+E+ + G P ID R ++
Sbjct: 211 DARL-PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 269
Query: 308 LQWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVN 367
+ P + + ++ ++D C RP SE++E +
Sbjct: 270 TRMRAPDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLG 308
Query: 368 KIVDASAE 375
++ A+A+
Sbjct: 309 NLLQANAQ 316
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 18/207 (8%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVEHQNLVK 149
IGEG +G ++ ++ D KV VA+K++ + + + E+ L H+N++
Sbjct: 51 IGEGAYG-----MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 105
Query: 150 LVGYC-ADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
+ A E+ LV M D Y K++ + + + Q RGL Y+H
Sbjct: 106 INDIIRAPTIEQMKDVYLVTHLM---GADLYKLLKTQHLSNDHICYFLYQ-ILRGLKYIH 161
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVSTAVVGTMGYAAPEY 267
++ RD K SN+LL+ + K+ DFGLAR+ P T T V T Y APE
Sbjct: 162 SA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 218
Query: 268 VQTGRLAARS-DVWSYGVFLYELITGR 293
+ + +S D+WS G L E+++ R
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 28/218 (12%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVE 143
+++ IGEG +G ++ ++ D +K VA+K++ + + + E+ L
Sbjct: 45 YTQLQYIGEGAYG-----MVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFR 99
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK------IA 197
H+N++ + R I R E M + + Q L L + +L
Sbjct: 100 HENVIGI---------RDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFL 150
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVSTAV 256
RGL Y+H ++ RD K SN+L++ + K+ DFGLAR+ P T T
Sbjct: 151 YQILRGLKYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEX 207
Query: 257 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 89/217 (41%), Gaps = 13/217 (5%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLG 140
K +F +G+G FG VY K ++ + QL + G + E+
Sbjct: 10 KFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 141 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
+ H N++++ Y D + L+ E+ P G + Y + ++
Sbjct: 70 HLRHPNILRMYNYFHDRK----RIYLMLEFAPRGEL--YKELQKHGRFDEQRSATFMEEL 123
Query: 201 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTM 260
A L Y HE ++I RD K N+L+ + K++DFG + PS + GT+
Sbjct: 124 ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR----RRXMCGTL 176
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 297
Y PE ++ + D+W GV YE + G P D
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 24/218 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNF 138
+ +NF + IGEG +G VYK K + + VA+K++ G + E++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISL 55
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 56 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH----E 163
Query: 257 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 126/304 (41%), Gaps = 45/304 (14%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFL-GIVEHQNLV 148
+G G FG V + + + VAVK L H E M+E+ L I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL- 207
L+G C + G +++ E+ G++ YL K + + + + L +L
Sbjct: 86 NLLGACT---KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 208 ------HEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
+GM+F + I RD + NILL E+ K+ DFGLAR +
Sbjct: 143 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQWV 311
+ + APE + +SDVWS+GV L+E+ + G P ID R ++ +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 262
Query: 312 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVD 371
P + + ++ ++D C RP SE++E + ++
Sbjct: 263 APDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLLQ 301
Query: 372 ASAE 375
A+A+
Sbjct: 302 ANAQ 305
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 126/304 (41%), Gaps = 45/304 (14%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFL-GIVEHQNLV 148
+G G FG V + + + VAVK L H E M+E+ L I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL- 207
L+G C + G +++ E+ G++ YL K + + + + L +L
Sbjct: 86 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 208 ------HEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
+GM+F + I RD + NILL E+ K+ DFGLAR +
Sbjct: 143 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQWV 311
+ + APE + +SDVWS+GV L+E+ + G P ID R ++ +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 262
Query: 312 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVD 371
P + + ++ ++D C RP SE++E + ++
Sbjct: 263 APDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLLQ 301
Query: 372 ASAE 375
A+A+
Sbjct: 302 ANAQ 305
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQK-VEVAVK-----QLGRRGGHKEWMTEVNFLGIVEHQN 146
+G+G FG V +G + PS K V VAVK L + +++ EVN + ++H+N
Sbjct: 16 LGDGSFGVVRRG---EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 206
L++L G + +V E P GS+ L L + + A A G+ Y
Sbjct: 73 LIRLYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGY 126
Query: 207 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT-MGYAAP 265
L + I RD + N+LL + K+ DFGL R P V + AP
Sbjct: 127 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 183
Query: 266 EYVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
E ++T + SD W +GV L+E+ T G+ P
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 24/218 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNF 138
+ +NF + IGEG +G VYK K + + VA+K++ G + E++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISL 55
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 56 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH----E 163
Query: 257 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 24/216 (11%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNFLG 140
+NF + IGEG +G VYK K + + VA+K++ G + E++ L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISLLK 56
Query: 141 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
+ H N+VKL+ ++ + LV+E++ + + ++ + T + +
Sbjct: 57 ELNHPNIVKLLDVIHTEN----KLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQL 111
Query: 201 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAVVG 258
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P +TH V
Sbjct: 112 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH----EVV 164
Query: 259 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T+ Y APE + + + + D+WS G E++T R
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 24/218 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNF 138
+ +NF + IGEG +G VYK K + + VA+K++ G + E++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISL 58
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 59 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH----E 166
Query: 257 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 24/218 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNF 138
+ +NF + IGEG +G VYK K + + VA+K++ G + E++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISL 57
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 58 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 113 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH----E 165
Query: 257 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 24/218 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNF 138
+ +NF + IGEG +G VYK K + + VA+K++ G + E++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISL 57
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 58 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 113 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH----E 165
Query: 257 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 24/218 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNF 138
+ +NF + IGEG +G VYK K + + VA+K++ G + E++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISL 55
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 56 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH----E 163
Query: 257 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 32/217 (14%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAV---KQLGRRGGHKEWMTEVNFLGIVEHQNLV 148
V+G+G FG V ++ + Q+ V V +Q+ ++ + + EV L ++H N++
Sbjct: 39 VLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 95
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
KL + D +G L+ Y D+ +S K + + A +I + G+ Y+H
Sbjct: 96 KLYEFFED---KGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITYMH 149
Query: 209 EGMDFQIIVRDFKSSNILLDEQ---WNAKLSDFGLARLGPSEGFTHVSTAV-----VGTM 260
+ +I+ RD K N+LL+ + N ++ DFGL+ TH + +GT
Sbjct: 150 KN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THFEASKKMKDKIGTA 198
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 297
Y APE V G + DVWS GV LY L++G P +
Sbjct: 199 YYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 234
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 24/218 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNF 138
+ +NF + IGEG +G VYK K + + VA+K++ G + E++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISL 57
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 58 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 113 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH----E 165
Query: 257 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 126/304 (41%), Gaps = 45/304 (14%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFL-GIVEHQNLV 148
+G G FG V + + + VAVK L H E M+E+ L I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL- 207
L+G C + G +++ E+ G++ YL K + + + + L +L
Sbjct: 95 NLLGACT---KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 208 ------HEGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
+GM+F + I RD + NILL E+ K+ DFGLAR +
Sbjct: 152 CYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQWV 311
+ + APE + +SDVWS+GV L+E+ + G P ID R ++ +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 271
Query: 312 KPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVD 371
P + + ++ ++D C RP SE++E + ++
Sbjct: 272 APDYTTPEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLLQ 310
Query: 372 ASAE 375
A+A+
Sbjct: 311 ANAQ 314
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 32/217 (14%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAV---KQLGRRGGHKEWMTEVNFLGIVEHQNLV 148
V+G+G FG V ++ + Q+ V V +Q+ ++ + + EV L ++H N++
Sbjct: 33 VLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 89
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
KL + D +G L+ Y D+ +S K + + A +I + G+ Y+H
Sbjct: 90 KLYEFFED---KGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITYMH 143
Query: 209 EGMDFQIIVRDFKSSNILLDEQ---WNAKLSDFGLARLGPSEGFTHVSTAV-----VGTM 260
+ +I+ RD K N+LL+ + N ++ DFGL+ TH + +GT
Sbjct: 144 KN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THFEASKKMKDKIGTA 192
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 297
Y APE V G + DVWS GV LY L++G P +
Sbjct: 193 YYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 44/220 (20%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVEHQNLV- 148
IGEG +G ++ ++ D KV VA+K++ + + + E+ L H+N++
Sbjct: 35 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 89
Query: 149 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
K V D E + +LL +++ N + +L
Sbjct: 90 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 134
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 254
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T
Sbjct: 135 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 189
Query: 255 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 190 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 44/220 (20%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG---RRGGHKEWMTEVNFLGIVEHQNLV- 148
IGEG +G ++ ++ D KV VA+K++ + + + E+ L H+N++
Sbjct: 36 IGEGAYG-----MVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 90
Query: 149 -------------KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLK 195
K V D E + +LL +++ N + +L
Sbjct: 91 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL--------------- 135
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVST 254
RGL Y+H ++ RD K SN+LL+ + K+ DFGLAR+ P T
Sbjct: 136 --YQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 190
Query: 255 AVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T Y APE + + +S D+WS G L E+++ R
Sbjct: 191 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 24/218 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNF 138
+ +NF + IGEG +G VYK K + + VA+K++ G + E++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISL 58
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 59 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 114 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH----E 166
Query: 257 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 24/216 (11%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNFLG 140
+NF + IGEG +G VYK K + + VA+K++ G + E++ L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISLLK 56
Query: 141 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
+ H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 57 ELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 201 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAVVG 258
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H V
Sbjct: 112 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH----EVV 164
Query: 259 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T+ Y APE + + + + D+WS G E++T R
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 24/218 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNF 138
+ +NF + IGEG +G VYK K + + VA+K++ G + E++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISL 56
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 57 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 112 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH----E 164
Query: 257 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 24/218 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNF 138
+ +NF + IGEG +G VYK K + + VA+K++ G + E++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISL 56
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 57 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 112 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH----E 164
Query: 257 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK--EWMTEVNFLGIVEHQNLVKL 150
+G+G FG VYK +++ V A K + + + ++M E++ L +H N+VKL
Sbjct: 45 LGDGAFGKVYK-----AQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKL 99
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
+ ++ I + E+ G+VD + + E LT + + + L YLH
Sbjct: 100 LDAFYYENNLWI----LIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLDALNYLH-- 152
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 270
D +II RD K+ NIL + KL+DFG++ + + +GT + APE V
Sbjct: 153 -DNKIIHRDLKAGNILFTLDGDIKLADFGVS--AKNTRXIQRRDSFIGTPYWMAPEVVMC 209
Query: 271 GRLAAR-----SDVWSYGVFLYELITGRRP 295
R +DVWS G+ L E+ P
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 24/218 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNF 138
+ +NF + IGEG +G VYK K + + VA+K++ G + E++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISL 59
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 60 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 114
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 115 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH----E 167
Query: 257 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 24/216 (11%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNFLG 140
+NF + IGEG +G VYK K + + VA+K++ G + E++ L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISLLK 56
Query: 141 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
+ H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 57 ELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 201 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAVVG 258
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H V
Sbjct: 112 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH----EVV 164
Query: 259 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T+ Y APE + + + + D+WS G E++T R
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 24/218 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNF 138
+ +NF + IGEG +G VYK K + + VA+K++ G + E++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISL 55
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 56 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH----E 163
Query: 257 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 96/211 (45%), Gaps = 20/211 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQK-VEVAVK-----QLGRRGGHKEWMTEVNFLGIVEHQN 146
+G+G FG V +G + PS K V VAVK L + +++ EVN + ++H+N
Sbjct: 26 LGDGSFGVVRRG---EWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 206
L++L G + +V E P GS+ L L + + A A G+ Y
Sbjct: 83 LIRLYGVVLTPPMK-----MVTELAPLGSLLDRLRKHQGHFLLGTLS-RYAVQVAEGMGY 136
Query: 207 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGT-MGYAAP 265
L + I RD + N+LL + K+ DFGL R P V + AP
Sbjct: 137 LESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 193
Query: 266 EYVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
E ++T + SD W +GV L+E+ T G+ P
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 24/218 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNF 138
+ +NF + IGEG +G VYK K + + VA+K++ G + E++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISL 58
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 59 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLF 113
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH----E 166
Query: 257 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 102/233 (43%), Gaps = 36/233 (15%)
Query: 86 NFSRSVVIGEGGFGCVYK----GLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLG 140
N +G G FG V + GL K ED KV V + + KE M+E+ +
Sbjct: 32 NLQFGKTLGAGAFGKVVEATAFGLGK--EDAVLKVAVKMLKSTAHADEKEALMSELKIMS 89
Query: 141 -IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR------ 193
+ +H+N+V L+G C G L++ EY G + +L K+E +L ++
Sbjct: 90 HLGQHENIVNLLGACT----HGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPE 145
Query: 194 ---------------LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDF 238
L + A+G+A+L I RD + N+LL AK+ DF
Sbjct: 146 GLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDF 202
Query: 239 GLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
GLAR ++ V + + APE + +SDVWSYG+ L+E+ +
Sbjct: 203 GLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 104/233 (44%), Gaps = 20/233 (8%)
Query: 69 PSNLKEFTIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGG 128
P KE ++K ++F ++G+G FG V+ K + + ++ K +
Sbjct: 2 PELNKERPSLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKT-NQFFAIKALKKDVVLMDD 60
Query: 129 HKEW-MTEVNFLGIV-EHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSET 186
E M E L + EH L + +C + + V EY+ G + ++ +
Sbjct: 61 DVECTMVEKRVLSLAWEHPFLTHM--FCTFQTKENL--FFVMEYLNGGDLMYHIQSCHKF 116
Query: 187 ILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR---L 243
L+ A A + GL +LH I+ RD K NILLD+ + K++DFG+ + L
Sbjct: 117 DLSRATF--YAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENML 171
Query: 244 GPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
G ++ + GT Y APE + + D WS+GV LYE++ G+ P
Sbjct: 172 GDAK-----TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 22/210 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK--EWMTEVNFLGIVEHQNLVKL 150
+G+G FG VYK +++ V A K + + + ++M E++ L +H N+VKL
Sbjct: 45 LGDGAFGKVYK-----AQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKL 99
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
+ ++ I + E+ G+VD + + E LT + + + L YLH
Sbjct: 100 LDAFYYENNLWI----LIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLDALNYLH-- 152
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 270
D +II RD K+ NIL + KL+DFG++ + + +GT + APE V
Sbjct: 153 -DNKIIHRDLKAGNILFTLDGDIKLADFGVS--AKNTRTIQRRDSFIGTPYWMAPEVVMC 209
Query: 271 GRLAAR-----SDVWSYGVFLYELITGRRP 295
R +DVWS G+ L E+ P
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 24/218 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNF 138
+ +NF + IGEG +G VYK K + + VA+K++ G + E++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISL 56
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 57 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLF 111
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 112 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH----E 164
Query: 257 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 106/218 (48%), Gaps = 24/218 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNF 138
+ +NF + IGEG +G VYK K + + VA+K++ G + E++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISL 55
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
L + H N+VKL+ ++ + LV+E++ + + ++ + T + +
Sbjct: 56 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLF 110
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 111 QLLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH----E 163
Query: 257 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 24/216 (11%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNFLG 140
+NF + IGEG +G VYK K + + VA+K++ G + E++ L
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISLLK 58
Query: 141 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
+ H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 59 ELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 201 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAVVG 258
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H V
Sbjct: 114 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH----EVV 166
Query: 259 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T+ Y APE + + + + D+WS G E++T R
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 22/210 (10%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK--EWMTEVNFLGIVEHQNLVKL 150
+G+G FG VYK +++ V A K + + + ++M E++ L +H N+VKL
Sbjct: 45 LGDGAFGKVYK-----AQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKL 99
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
+ ++ I + E+ G+VD + + E LT + + + L YLH
Sbjct: 100 LDAFYYENNLWI----LIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLDALNYLH-- 152
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 270
D +II RD K+ NIL + KL+DFG++ + +GT + APE V
Sbjct: 153 -DNKIIHRDLKAGNILFTLDGDIKLADFGVS--AKNTRXIQRRDXFIGTPYWMAPEVVMC 209
Query: 271 GRLAAR-----SDVWSYGVFLYELITGRRP 295
R +DVWS G+ L E+ P
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 106/218 (48%), Gaps = 24/218 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNF 138
+ +NF + IGEG +G VYK K + + VA+K++ G + E++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISL 58
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
L + H N+VKL+ ++ + LV+E++ + + ++ + T + +
Sbjct: 59 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLF 113
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 114 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH----E 166
Query: 257 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 106/218 (48%), Gaps = 24/218 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNF 138
+ +NF + IGEG +G VYK K + + VA+K++ G + E++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISL 58
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
L + H N+VKL+ ++ + LV+E++ + + ++ + T + +
Sbjct: 59 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLF 113
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 114 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH----E 166
Query: 257 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 32/217 (14%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAV---KQLGRRGGHKEWMTEVNFLGIVEHQNLV 148
V+G+G FG V ++ + Q+ V V +Q+ ++ + + EV L ++H N++
Sbjct: 56 VLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 112
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
KL + D +G L+ Y D+ +S K + + A +I + G+ Y+H
Sbjct: 113 KLYEFFED---KGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITYMH 166
Query: 209 EGMDFQIIVRDFKSSNILLDEQ---WNAKLSDFGLARLGPSEGFTHVSTAV-----VGTM 260
+ +I+ RD K N+LL+ + N ++ DFGL+ TH + +GT
Sbjct: 167 KN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THFEASKKMKDKIGTA 215
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 297
Y APE V G + DVWS GV LY L++G P +
Sbjct: 216 YYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 251
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 32/217 (14%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAV---KQLGRRGGHKEWMTEVNFLGIVEHQNLV 148
V+G+G FG V ++ + Q+ V V +Q+ ++ + + EV L ++H N++
Sbjct: 57 VLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIM 113
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
KL + D +G L+ Y D+ +S K + + A +I + G+ Y+H
Sbjct: 114 KLYEFFED---KGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITYMH 167
Query: 209 EGMDFQIIVRDFKSSNILLDEQ---WNAKLSDFGLARLGPSEGFTHVSTAV-----VGTM 260
+ +I+ RD K N+LL+ + N ++ DFGL+ TH + +GT
Sbjct: 168 KN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THFEASKKMKDKIGTA 216
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 297
Y APE + G + DVWS GV LY L++G P +
Sbjct: 217 YYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFN 252
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 106/218 (48%), Gaps = 24/218 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNF 138
+ +NF + IGEG +G VYK K + + VA+K++ G + E++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISL 57
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
L + H N+VKL+ ++ + LV+E++ + + ++ + T + +
Sbjct: 58 LKELNHPNIVKLLDVIHTEN----KLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLF 112
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 113 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH----E 165
Query: 257 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 104/237 (43%), Gaps = 28/237 (11%)
Query: 69 PSNLKEFTIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGG 128
P KE ++K ++F ++G+G FG V+ K + A+K L +
Sbjct: 1 PELNKERPSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQ-----FFAIKALKKDVV 55
Query: 129 HKE-----WMTEVNFLGIV-EHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSP 182
+ M E L + EH L + +C + + V EY+ G + ++
Sbjct: 56 LMDDDVECTMVEKRVLSLAWEHPFLTHM--FCTFQTKENL--FFVMEYLNGGDLMYHIQS 111
Query: 183 KSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR 242
+ L+ A A + GL +LH I+ RD K NILLD+ + K++DFG+ +
Sbjct: 112 CHKFDLSRATF--YAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK 166
Query: 243 ---LGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
LG ++ + GT Y APE + + D WS+GV LYE++ G+ P
Sbjct: 167 ENMLGDAK-----TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 114/259 (44%), Gaps = 33/259 (12%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR---GGHKEWMTEVNFLGIVEHQNLV 148
V+G G F V +ED + VA+K + ++ G E+ L ++H N+V
Sbjct: 25 VLGTGAFSEVIL-----AEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
L D E G L+ + + G + + K A RL I Q + YLH
Sbjct: 80 AL----DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL-IFQ-VLDAVKYLH 133
Query: 209 EGMDFQIIVRDFKSSNIL---LDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAP 265
D I+ RD K N+L LDE +SDFGL+++ E V + GT GY AP
Sbjct: 134 ---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAP 187
Query: 266 EYVQTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPRSEQKLL----QWVKPYLSD--- 317
E + + D WS GV Y L+ G P D N + +++L ++ PY D
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 318 -AKQF-RQIVDPRLEGKYS 334
AK F R +++ E +++
Sbjct: 248 SAKDFIRHLMEKDPEKRFT 266
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 29/226 (12%)
Query: 86 NFSRSVVIGEGGFGCVYK----GLIKNSEDPSQKVEVAVKQLGRRGGHKE-WMTEVNFLG 140
N +G G FG V + GL K ED KV V + + KE M+E+ +
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGK--EDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 141 -IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR------ 193
+ +H+N+V L+G C G L++ EY G + +L K L ++
Sbjct: 105 HLGQHENIVNLLGACT----HGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPE 160
Query: 194 --------LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGP 245
L + A+G+A+L I RD + N+LL AK+ DFGLAR
Sbjct: 161 EQLSSRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 217
Query: 246 SEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
++ V + + APE + +SDVWSYG+ L+E+ +
Sbjct: 218 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 203 GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGY 262
L YLHE II RD K N+LLD + + KL+D+G+ + G G T ++ GT Y
Sbjct: 165 ALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGTPNY 219
Query: 263 AAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 297
APE ++ D W+ GV ++E++ GR P D
Sbjct: 220 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 92 VIGE-GGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK--EWMTEVNFLGIVEHQNLV 148
+IGE G FG VYK +++ V A K + + + ++M E++ L +H N+V
Sbjct: 16 IIGELGDFGKVYK-----AQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV 70
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
KL+ ++ I + E+ G+VD + + E LT + + + L YLH
Sbjct: 71 KLLDAFYYENNLWI----LIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLDALNYLH 125
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 268
D +II RD K+ NIL + KL+DFG++ + + +GT + APE V
Sbjct: 126 ---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKN-TRTXIQRRDSFIGTPYWMAPEVV 181
Query: 269 QTGRLAAR-----SDVWSYGVFLYELITGRRP 295
R +DVWS G+ L E+ P
Sbjct: 182 MCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 15/252 (5%)
Query: 48 NVSAISVESEARPSYPSMSQRPSNLKEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLI 106
++SA + A+PS + + + LKE + T K + R +G+GGF Y+
Sbjct: 5 SMSAAIAKPSAKPSA-HVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITD 63
Query: 107 KNSEDPSQKVEVAVKQLGRRGGHKEWM-TEVNFLGIVEHQNLVKLVGYCADDDERGIQRL 165
++++ +V K + + KE M TE+ +++ ++V G+ DDD +
Sbjct: 64 MDTKEVFAG-KVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYV--- 119
Query: 166 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 225
V E S+ + L + + + R + Q +G+ YLH ++I RD K N+
Sbjct: 120 -VLEICRRRSLLE-LHKRRKAVTEPEARYFMRQ-TIQGVQYLHNN---RVIHRDLKLGNL 173
Query: 226 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 285
L++ + K+ DFGLA +G + GT Y APE + + D+WS G
Sbjct: 174 FLNDDMDVKIGDFGLATKIEFDG--ERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCI 231
Query: 286 LYELITGRRPID 297
LY L+ G+ P +
Sbjct: 232 LYTLLVGKPPFE 243
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 101/236 (42%), Gaps = 28/236 (11%)
Query: 71 NLKEFTIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK 130
N +E A ++F VIG G + V +K + D ++V K+L
Sbjct: 6 NTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKT-DRIYAMKVVKKELVNDDEDI 64
Query: 131 EWM-TEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILT 189
+W+ TE + + + + C + R V EY+ G + +
Sbjct: 65 DWVQTEKHVFEQASNHPFLVGLHSCFQTESR---LFFVIEYVNGGDL----------MFH 111
Query: 190 WAMRLKIAQDAAR--------GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA 241
+ K+ ++ AR L YLHE II RD K N+LLD + + KL+D+G+
Sbjct: 112 MQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMC 168
Query: 242 RLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 297
+ G G T ++ GT Y APE ++ D W+ GV ++E++ GR P D
Sbjct: 169 KEGLRPGDT--TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 15/252 (5%)
Query: 48 NVSAISVESEARPSYPSMSQRPSNLKEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLI 106
++SA + A+PS + + + LKE + T K + R +G+GGF Y+
Sbjct: 5 SMSAAIAKPSAKPSA-HVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITD 63
Query: 107 KNSEDPSQKVEVAVKQLGRRGGHKEWM-TEVNFLGIVEHQNLVKLVGYCADDDERGIQRL 165
++++ +V K + + KE M TE+ +++ ++V G+ DDD +
Sbjct: 64 MDTKEVFAG-KVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYV--- 119
Query: 166 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 225
V E S+ + L + + + R + Q +G+ YLH ++I RD K N+
Sbjct: 120 -VLEICRRRSLLE-LHKRRKAVTEPEARYFMRQ-TIQGVQYLHNN---RVIHRDLKLGNL 173
Query: 226 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 285
L++ + K+ DFGLA +G + GT Y APE + + D+WS G
Sbjct: 174 FLNDDMDVKIGDFGLATKIEFDG--ERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCI 231
Query: 286 LYELITGRRPID 297
LY L+ G+ P +
Sbjct: 232 LYTLLVGKPPFE 243
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 120/258 (46%), Gaps = 28/258 (10%)
Query: 44 LTSQNVSAISVESEARPSYPSMSQRPSNLKEFTIAELKSATKNFSRSVVIGEGGFGCVYK 103
+ S+ SA++V+ A P+ R K+ + + S++ ++G G FG V+K
Sbjct: 54 VKSKRTSALAVDIPAPPA--PFDHRIVTAKQGAVNSFYTV----SKTEILGGGRFGQVHK 107
Query: 104 GLIKNSEDPSQKVEVAVKQLGRRG--GHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERG 161
E+ + +++A K + RG +E E++ + ++H NL++L Y A + +
Sbjct: 108 -----CEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL--YDAFESKND 160
Query: 162 IQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFK 221
I +LV EY+ G + + +S + L + Q G+ ++H+ I+ D K
Sbjct: 161 I--VLVMEYVDGGELFDRIIDESYNLTELDTILFMKQ-ICEGIRHMHQ---MYILHLDLK 214
Query: 222 SSNILL--DEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSD 278
NIL + K+ DFGLAR P E GT + APE V ++ +D
Sbjct: 215 PENILCVNRDAKQIKIIDFGLARRYKPREKLK----VNFGTPEFLAPEVVNYDFVSFPTD 270
Query: 279 VWSYGVFLYELITGRRPI 296
+WS GV Y L++G P
Sbjct: 271 MWSVGVIAYMLLSGLSPF 288
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 107/218 (49%), Gaps = 24/218 (11%)
Query: 83 ATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNF 138
+ +NF + IGEG +G VYK K + + VA+K++ G + E++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGE-----VVALKKIRLDTETEGVPSTAIREISL 58
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
L + H N+VKL+ ++ + LV+E++ + + +++ + T + +
Sbjct: 59 LKELNHPNIVKLLDVIHTEN----KLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAV 256
+GLA+ H +++ RD K N+L++ + KL+DFGLAR G P + H
Sbjct: 114 QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH----E 166
Query: 257 VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
V T+ Y APE + + + + D+WS G E++T R
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 97/228 (42%), Gaps = 36/228 (15%)
Query: 93 IGEGGFGCVYK----GLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFLGIV-EH 144
+G G FG V + GLIK+ + VAVK L E M+E+ L + H
Sbjct: 47 LGAGAFGKVVEATAYGLIKSD----AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 102
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI-------- 196
N+V L+G C G L++ EY G + +L K ++ + I
Sbjct: 103 MNIVNLLGACT----IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 158
Query: 197 --------AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG 248
+ A+G+A+L I RD + NILL K+ DFGLAR ++
Sbjct: 159 DLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 215
Query: 249 FTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
V + + APE + SDVWSYG+FL+EL + G P
Sbjct: 216 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 263
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 203 GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGY 262
L YLHE II RD K N+LLD + + KL+D+G+ + G G T ++ GT Y
Sbjct: 118 ALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNY 172
Query: 263 AAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 297
APE ++ D W+ GV ++E++ GR P D
Sbjct: 173 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 203 GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGY 262
L YLHE II RD K N+LLD + + KL+D+G+ + G G T ++ GT Y
Sbjct: 122 ALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSXFCGTPNY 176
Query: 263 AAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 297
APE ++ D W+ GV ++E++ GR P D
Sbjct: 177 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 117/258 (45%), Gaps = 27/258 (10%)
Query: 48 NVSAISVESEARPSYPSMSQRPSNLKEFTIAELKSAT-KNFSRSVVIGEGGFGCVYKGLI 106
++SA + A+PS + + + LKE + T K + R +G+GGF Y+
Sbjct: 5 SMSAAIAKPSAKPSA-HVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITD 63
Query: 107 KNSEDPSQKVEVAVKQLGRRGGHKEWM-TEVNFLGIVEHQNLVKLVGYCADDD------E 159
++++ +V K + + KE M TE+ +++ ++V G+ DDD E
Sbjct: 64 MDTKEVFAG-KVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLE 122
Query: 160 RGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRD 219
+R L+ + +V +E + MR I +G+ YLH ++I RD
Sbjct: 123 ICRRRSLLELHKRRKAV-------TEPEARYFMRQTI-----QGVQYLHNN---RVIHRD 167
Query: 220 FKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDV 279
K N+ L++ + K+ DFGLA +G + GT Y APE + + D+
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERKKDLCGTPNYIAPEVLCKKGHSFEVDI 225
Query: 280 WSYGVFLYELITGRRPID 297
WS G LY L+ G+ P +
Sbjct: 226 WSLGCILYTLLVGKPPFE 243
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 97/228 (42%), Gaps = 36/228 (15%)
Query: 93 IGEGGFGCVYK----GLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFLGIV-EH 144
+G G FG V + GLIK+ + VAVK L E M+E+ L + H
Sbjct: 31 LGAGAFGKVVEATAYGLIKSD----AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 86
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI-------- 196
N+V L+G C G L++ EY G + +L K ++ + I
Sbjct: 87 MNIVNLLGACT----IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 197 --------AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG 248
+ A+G+A+L I RD + NILL K+ DFGLAR ++
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 199
Query: 249 FTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
V + + APE + SDVWSYG+FL+EL + G P
Sbjct: 200 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 247
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 97/228 (42%), Gaps = 36/228 (15%)
Query: 93 IGEGGFGCVYK----GLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFLGIV-EH 144
+G G FG V + GLIK+ + VAVK L E M+E+ L + H
Sbjct: 54 LGAGAFGKVVEATAYGLIKSD----AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI-------- 196
N+V L+G C G L++ EY G + +L K ++ + I
Sbjct: 110 MNIVNLLGACT----IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 197 --------AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG 248
+ A+G+A+L I RD + NILL K+ DFGLAR ++
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDS 222
Query: 249 FTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
V + + APE + SDVWSYG+FL+EL + G P
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 97/228 (42%), Gaps = 36/228 (15%)
Query: 93 IGEGGFGCVYK----GLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFLGIV-EH 144
+G G FG V + GLIK+ + VAVK L E M+E+ L + H
Sbjct: 49 LGAGAFGKVVEATAYGLIKSD----AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 104
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI-------- 196
N+V L+G C G L++ EY G + +L K ++ + I
Sbjct: 105 MNIVNLLGACT----IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 160
Query: 197 --------AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG 248
+ A+G+A+L I RD + NILL K+ DFGLAR ++
Sbjct: 161 DLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 217
Query: 249 FTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
V + + APE + SDVWSYG+FL+EL + G P
Sbjct: 218 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 265
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 105/220 (47%), Gaps = 30/220 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWM--TEVNFLGIVEHQNLVKL 150
+G+G +G V++GL VAVK R + W TE+ ++ H N++
Sbjct: 16 VGKGRYGEVWRGLWHGES-------VAVKIFSSRD-EQSWFRETEIYNTVLLRHDNILGF 67
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH-E 209
+ Q L+ Y +GS+ +L ++ L + L++A AA GLA+LH E
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQT---LEPHLALRLAVSAACGLAHLHVE 124
Query: 210 GMDFQ----IIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV---STAVVGTMGY 262
Q I RDFKS N+L+ ++D GLA + S+G ++ + VGT Y
Sbjct: 125 IFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMH-SQGSDYLDIGNNPRVGTKRY 183
Query: 263 AAPEY----VQTGRLAAR--SDVWSYGVFLYELITGRRPI 296
APE ++T + +D+W++G+ L+E+ RR I
Sbjct: 184 MAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTI 221
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 94/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R IG G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FERIKTIGTGSFGRVM--LVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EYMP G + +L A R A
Sbjct: 100 F------PFLVKLEFSFKDNS----NLYMVMEYMPGGDMFSHLRRIGRFSEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q K++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 106/255 (41%), Gaps = 32/255 (12%)
Query: 118 VAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVD 177
+AVKQ+ R G +E + L +V + + C + E M G+
Sbjct: 53 IAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM--GTCA 110
Query: 178 QYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSD 237
+ L + + + + K+ + L YL E +I RD K SNILLDE+ KL D
Sbjct: 111 EKLKKRMQGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCD 168
Query: 238 FGLA-RLGPSEGFTHVSTAVVGTMGYAAPEYVQ-----TGRLAARSDVWSYGVFLYELIT 291
FG++ RL + G Y APE + R+DVWS G+ L EL T
Sbjct: 169 FGISGRLVDDK----AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELAT 224
Query: 292 GRRPIDRNRPRSE--QKLLQWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCL 349
G+ P + E K+LQ P L F G + S V + CL
Sbjct: 225 GQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGF--------SGDFQ-------SFVKD-CL 268
Query: 350 VKNARTRPKMSEVLE 364
K+ R RPK +++LE
Sbjct: 269 TKDHRKRPKYNKLLE 283
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 94/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R IG G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FERIKTIGTGSFGRVM--LVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EYMP G + +L A R A
Sbjct: 100 F------PFLVKLEFSFKDNS----NLYMVMEYMPGGDMFSHLRRIGRFSEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q K++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 113/259 (43%), Gaps = 33/259 (12%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR---GGHKEWMTEVNFLGIVEHQNLV 148
V+G G F V +ED + VA+K + + G E+ L ++H N+V
Sbjct: 25 VLGTGAFSEVIL-----AEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
L D E G L+ + + G + + K A RL I Q + YLH
Sbjct: 80 AL----DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL-IFQ-VLDAVKYLH 133
Query: 209 EGMDFQIIVRDFKSSNIL---LDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAP 265
D I+ RD K N+L LDE +SDFGL+++ E V + GT GY AP
Sbjct: 134 ---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAP 187
Query: 266 EYVQTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPRSEQKLL----QWVKPYLSD--- 317
E + + D WS GV Y L+ G P D N + +++L ++ PY D
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 318 -AKQF-RQIVDPRLEGKYS 334
AK F R +++ E +++
Sbjct: 248 SAKDFIRHLMEKDPEKRFT 266
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 113/259 (43%), Gaps = 33/259 (12%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR---GGHKEWMTEVNFLGIVEHQNLV 148
V+G G F V +ED + VA+K + + G E+ L ++H N+V
Sbjct: 25 VLGTGAFSEVIL-----AEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
L D E G L+ + + G + + K A RL I Q + YLH
Sbjct: 80 AL----DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL-IFQ-VLDAVKYLH 133
Query: 209 EGMDFQIIVRDFKSSNIL---LDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAP 265
D I+ RD K N+L LDE +SDFGL+++ E V + GT GY AP
Sbjct: 134 ---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAP 187
Query: 266 EYVQTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPRSEQKLL----QWVKPYLSD--- 317
E + + D WS GV Y L+ G P D N + +++L ++ PY D
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 318 -AKQF-RQIVDPRLEGKYS 334
AK F R +++ E +++
Sbjct: 248 SAKDFIRHLMEKDPEKRFT 266
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 113/259 (43%), Gaps = 33/259 (12%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR---GGHKEWMTEVNFLGIVEHQNLV 148
V+G G F V +ED + VA+K + + G E+ L ++H N+V
Sbjct: 25 VLGTGAFSEVIL-----AEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
L D E G L+ + + G + + K A RL I Q + YLH
Sbjct: 80 AL----DDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL-IFQ-VLDAVKYLH 133
Query: 209 EGMDFQIIVRDFKSSNIL---LDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAP 265
D I+ RD K N+L LDE +SDFGL+++ E V + GT GY AP
Sbjct: 134 ---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAP 187
Query: 266 EYVQTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPRSEQKLL----QWVKPYLSD--- 317
E + + D WS GV Y L+ G P D N + +++L ++ PY D
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 318 -AKQF-RQIVDPRLEGKYS 334
AK F R +++ E +++
Sbjct: 248 SAKDFIRHLMEKDPEKRFT 266
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 97/228 (42%), Gaps = 36/228 (15%)
Query: 93 IGEGGFGCVYK----GLIKNSEDPSQKVEVAVKQLGRRGGHKE---WMTEVNFLGIV-EH 144
+G G FG V + GLIK+ + VAVK L E M+E+ L + H
Sbjct: 54 LGAGAFGKVVEATAYGLIKSD----AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKI-------- 196
N+V L+G C G L++ EY G + +L K ++ + I
Sbjct: 110 MNIVNLLGACT----IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 197 --------AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEG 248
+ A+G+A+L I RD + NILL K+ DFGLAR ++
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 222
Query: 249 FTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
V + + APE + SDVWSYG+FL+EL + G P
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 87/205 (42%), Gaps = 13/205 (6%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLVG 152
+G+G FG VY K S + Q+ + G + E+ + H N+++L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 153 YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMD 212
Y D R I L+ EY P G + Y + I ++ A L Y H
Sbjct: 91 YFYD--RRRI--YLILEYAPRGEL--YKELQKSCTFDEQRTATIMEELADALMYCHGK-- 142
Query: 213 FQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGR 272
++I RD K N+LL + K++DFG + PS + GT+ Y PE ++
Sbjct: 143 -KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLR----RKTMCGTLDYLPPEMIEGRM 197
Query: 273 LAARSDVWSYGVFLYELITGRRPID 297
+ D+W GV YEL+ G P +
Sbjct: 198 HNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 124/277 (44%), Gaps = 33/277 (11%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLVG 152
+G+G FG VYK KN E + V + ++++ E+ L +H +VKL+G
Sbjct: 27 LGDGAFGKVYKA--KNKETGALAA-AKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG 83
Query: 153 YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMD 212
D + I + E+ P G+VD + + +++ + + L +LH
Sbjct: 84 AYYHDGKLWI----MIEFCPGGAVDAIMLELDRGLTEPQIQV-VCRQMLEALNFLHSK-- 136
Query: 213 FQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGR 272
+II RD K+ N+L+ + + +L+DFG++ + + +GT + APE V
Sbjct: 137 -RIIHRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPEVVMCET 193
Query: 273 LAA-----RSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDP 327
+ ++D+WS G+ L E+ P P + LL+ K SD ++ P
Sbjct: 194 MKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--RVLLKIAK---SDPP---TLLTP 245
Query: 328 RLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
K+S+ L + L KN TRP +++LE
Sbjct: 246 ---SKWSVEFRDFL----KIALDKNPETRPSAAQLLE 275
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 124/277 (44%), Gaps = 33/277 (11%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLVG 152
+G+G FG VYK KN E + V + ++++ E+ L +H +VKL+G
Sbjct: 19 LGDGAFGKVYKA--KNKETGALAA-AKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG 75
Query: 153 YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMD 212
D + I + E+ P G+VD + + + LT + + L +LH
Sbjct: 76 AYYHDGKLWI----MIEFCPGGAVDAIML-ELDRGLTEPQIQVVCRQMLEALNFLHSK-- 128
Query: 213 FQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGR 272
+II RD K+ N+L+ + + +L+DFG++ + + +GT + APE V
Sbjct: 129 -RIIHRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPEVVMCET 185
Query: 273 LAA-----RSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDP 327
+ ++D+WS G+ L E+ P P + LL+ K SD ++ P
Sbjct: 186 MKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--RVLLKIAK---SDPP---TLLTP 237
Query: 328 RLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
K+S+ L + L KN TRP +++LE
Sbjct: 238 ---SKWSVEFRDFL----KIALDKNPETRPSAAQLLE 267
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 32/217 (14%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAV---KQLGRRGGHKEWMTEVNFLGIVEHQNLV 148
V+G+G FG V ++ + Q+ V V +Q+ ++ + + EV L ++H N+
Sbjct: 33 VLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIX 89
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
KL + D +G L+ Y D+ +S K + + A +I + G+ Y H
Sbjct: 90 KLYEFFED---KGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITYXH 143
Query: 209 EGMDFQIIVRDFKSSNILLDEQ---WNAKLSDFGLARLGPSEGFTHVSTAV-----VGTM 260
+ +I+ RD K N+LL+ + N ++ DFGL+ TH + +GT
Sbjct: 144 KN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THFEASKKXKDKIGTA 192
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 297
Y APE V G + DVWS GV LY L++G P +
Sbjct: 193 YYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 86 NFSRSVVIGEGGFGCVYKG---------LIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEV 136
+F +IG GGFG V+K +IK + ++K E VK L + +
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAK----------L 61
Query: 137 NFLGIVEHQNLVKLVGYCADDDERGIQR------LLVYEYMPNGSVDQYLSPKSETILTW 190
+ + IV + Y + + R + E+ G+++Q++ + L
Sbjct: 62 DHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDK 121
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
+ L++ + +G+ Y+H ++I RD K SNI L + K+ DFGL ++G
Sbjct: 122 VLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR 178
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI 290
S GT+ Y +PE + + D+++ G+ L EL+
Sbjct: 179 XRSK---GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 100/236 (42%), Gaps = 26/236 (11%)
Query: 73 KEFT--IAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK 130
K FT + +++ ++F VIG G FG V +KN++ + ++ +R
Sbjct: 60 KPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETA 119
Query: 131 EWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSP-----KSE 185
+ E + L + + + Y DD LV +Y G + LS E
Sbjct: 120 CFREERDVL-VNGDSKWITTLHYAFQDDN---NLYLVMDYYVGGDLLTLLSKFEDRLPEE 175
Query: 186 TILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGP 245
+ + IA D+ L Y+H RD K NIL+D + +L+DFG + L
Sbjct: 176 MARFYLAEMVIAIDSVHQLHYVH---------RDIKPDNILMDMNGHIRLADFG-SCLKL 225
Query: 246 SEGFTHVSTAVVGTMGYAAPEYVQT-----GRLAARSDVWSYGVFLYELITGRRPI 296
E T S+ VGT Y +PE +Q GR D WS GV +YE++ G P
Sbjct: 226 MEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 84/182 (46%), Gaps = 40/182 (21%)
Query: 195 KIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVST 254
KIA + L +LH + +I RD K SN+L++ K+ DFG++ G+ S
Sbjct: 157 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGIS------GYLVDSV 208
Query: 255 AVV---GTMGYAAPEYV-----QTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQK 306
A G Y APE + Q G + +SD+WS G+ + EL R P D
Sbjct: 209 AKTIDAGCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIELAILRFPYD--------- 258
Query: 307 LLQWVKPYLSDAKQFRQIVD---PRLEG-KYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
W P+ +Q +Q+V+ P+L K+S V S CL KN++ RP E+
Sbjct: 259 --SWGTPF----QQLKQVVEEPSPQLPADKFSAEFVDFTSQ----CLKKNSKERPTYPEL 308
Query: 363 LE 364
++
Sbjct: 309 MQ 310
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 166 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 225
V EY G + +LS E + T + L YLH ++ RD K N+
Sbjct: 82 FVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENL 136
Query: 226 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 285
+LD+ + K++DFGL + G S+G T GT Y APE ++ D W GV
Sbjct: 137 MLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 194
Query: 286 LYELITGRRPI 296
+YE++ GR P
Sbjct: 195 MYEMMCGRLPF 205
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 166 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 225
V EY G + +LS E + T + L YLH ++ RD K N+
Sbjct: 82 FVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENL 136
Query: 226 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 285
+LD+ + K++DFGL + G S+G T GT Y APE ++ D W GV
Sbjct: 137 MLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 194
Query: 286 LYELITGRRPI 296
+YE++ GR P
Sbjct: 195 MYEMMCGRLPF 205
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 166 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 225
V EY G + +LS E + T + L YLH ++ RD K N+
Sbjct: 85 FVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENL 139
Query: 226 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 285
+LD+ + K++DFGL + G S+G T GT Y APE ++ D W GV
Sbjct: 140 MLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 197
Query: 286 LYELITGRRPI 296
+YE++ GR P
Sbjct: 198 MYEMMCGRLPF 208
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 166 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 225
V EY G + +LS E + T + L YLH ++ RD K N+
Sbjct: 82 FVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENL 136
Query: 226 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 285
+LD+ + K++DFGL + G S+G T GT Y APE ++ D W GV
Sbjct: 137 MLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 194
Query: 286 LYELITGRRPI 296
+YE++ GR P
Sbjct: 195 MYEMMCGRLPF 205
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQN 146
++ VIG G FG V++ + S+ EVA+K++ + K E+ + IV+H N
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESD------EVAIKKVLQDKRFKN--RELQIMRIVKHPN 93
Query: 147 LVKLVG--YCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQDAAR 202
+V L Y D + + LV EY+P ++ + +T+ ++L + Q R
Sbjct: 94 VVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQ-LLR 152
Query: 203 GLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVGTMG 261
LAY+H I RD K N+LLD KL DFG A++ + G +VS + +
Sbjct: 153 SLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA-GEPNVSX--ICSRY 206
Query: 262 YAAPEYV-QTGRLAARSDVWSYGVFLYELITGR 293
Y APE + D+WS G + EL+ G+
Sbjct: 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 166 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 225
V EY G + +LS E + T + L YLH ++ RD K N+
Sbjct: 82 FVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENL 136
Query: 226 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 285
+LD+ + K++DFGL + G S+G T GT Y APE ++ D W GV
Sbjct: 137 MLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 194
Query: 286 LYELITGRRPI 296
+YE++ GR P
Sbjct: 195 MYEMMCGRLPF 205
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 166 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 225
V EY G + +LS E + T + L YLH ++ RD K N+
Sbjct: 87 FVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENL 141
Query: 226 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 285
+LD+ + K++DFGL + G S+G T GT Y APE ++ D W GV
Sbjct: 142 MLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 199
Query: 286 LYELITGRRPI 296
+YE++ GR P
Sbjct: 200 MYEMMCGRLPF 210
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 166 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 225
V EY G + +LS E + T + L YLH ++ RD K N+
Sbjct: 82 FVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENL 136
Query: 226 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 285
+LD+ + K++DFGL + G S+G T GT Y APE ++ D W GV
Sbjct: 137 MLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 194
Query: 286 LYELITGRRPI 296
+YE++ GR P
Sbjct: 195 MYEMMCGRLPF 205
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 119/289 (41%), Gaps = 43/289 (14%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWM--TEVNF 138
+S NF + IGEG G V +++S VAVK++ R + + EV
Sbjct: 150 RSYLDNF---IKIGEGSTGIVCIATVRSSGK-----LVAVKKMDLRKQQRRELLFNEVVI 201
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
+ +H+N+V++ DE + V E++ G++ T + R+ Q
Sbjct: 202 MRDYQHENVVEMYNSYLVGDELWV----VMEFLEGGAL---------TDIVTHTRMNEEQ 248
Query: 199 DAARGLAYLHEGMDFQ---IIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTA 255
AA LA L +I RD KS +ILL KLSDFG E
Sbjct: 249 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKX 306
Query: 256 VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYL 315
+VGT + APE + D+WS G+ + E++ G P + +P L
Sbjct: 307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY-------------FNEPPL 353
Query: 316 SDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
K R + PRL+ + ++ L + LV++ R +E+L+
Sbjct: 354 KAMKMIRDNLPPRLKNLH--KVSPSLKGFLDRLLVRDPAQRATAAELLK 400
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 113/273 (41%), Gaps = 34/273 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWM--TEVNFLGIVEHQNLVKL 150
IGEG G V K++ +VAVK++ R + + EV + H N+V +
Sbjct: 53 IGEGSTGIVCIATEKHTGK-----QVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDM 107
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEG 210
DE + V E++ G++ ++ T + + R L+YLH
Sbjct: 108 YSSYLVGDELWV----VMEFLEGGALTDIVT---HTRMNEEQIATVCLSVLRALSYLH-- 158
Query: 211 MDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT 270
+ +I RD KS +ILL KLSDFG E +VGT + APE +
Sbjct: 159 -NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE--VPKRKXLVGTPYWMAPEVISR 215
Query: 271 GRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRLE 330
D+WS G+ + E+I G P + +P L ++ R + PR++
Sbjct: 216 LPYGTEVDIWSLGIMVIEMIDGEPP-------------YFNEPPLQAMRRIRDSLPPRVK 262
Query: 331 GKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 363
+ ++ S L +L LV+ R E+L
Sbjct: 263 DLH--KVSSVLRGFLDLMLVREPSQRATAQELL 293
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQ 145
+++ + VIG G FG VY+ + +S + VA+K++ + K E+ + ++H
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQDKRFKN--RELQIMRKLDHC 92
Query: 146 NLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQDAA 201
N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LF 151
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVGTM 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS + +
Sbjct: 152 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--ICSR 205
Query: 261 GYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
Y APE + S DVWS G L EL+ G+
Sbjct: 206 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 13/214 (6%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWM-TEVNFLGIVE 143
K + R +G+GGF Y+ ++++ +V K + + KE M TE+ ++
Sbjct: 26 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAG-KVVPKSMLLKPHQKEKMSTEIAIHKSLD 84
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARG 203
+ ++V G+ DDD + V E S+ + L + + + R + Q +G
Sbjct: 85 NPHVVGFHGFFEDDDFVYV----VLEICRRRSLLE-LHKRRKAVTEPEARYFMRQ-TIQG 138
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYA 263
+ YLH ++I RD K N+ L++ + K+ DFGLA +G + GT Y
Sbjct: 139 VQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERKKDLCGTPNYI 193
Query: 264 APEYVQTGRLAARSDVWSYGVFLYELITGRRPID 297
APE + + D+WS G LY L+ G+ P +
Sbjct: 194 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 94/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R IG G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FERIKTIGTGSFGRVM--LVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+P G + +L A R A
Sbjct: 100 F------PFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q K++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQ 145
+++ + VIG G FG VY+ + +S + VA+K++ + K E+ + ++H
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQDKRFKN--RELQIMRKLDHC 107
Query: 146 NLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQDAA 201
N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LF 166
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVGTM 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS + +
Sbjct: 167 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--ICSR 220
Query: 261 GYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
Y APE + S DVWS G L EL+ G+
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQ 145
+++ + VIG G FG VY+ + +S + VA+K++ + K E+ + ++H
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQDKRFKN--RELQIMRKLDHC 81
Query: 146 NLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQDAA 201
N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LF 140
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVGTM 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS + +
Sbjct: 141 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--ICSR 194
Query: 261 GYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
Y APE + S DVWS G L EL+ G+
Sbjct: 195 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQ 145
+++ + VIG G FG VY+ + +S + VA+K++ + K E+ + ++H
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQDKRFKN--RELQIMRKLDHC 85
Query: 146 NLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQDAA 201
N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LF 144
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVGTM 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS + +
Sbjct: 145 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--ICSR 198
Query: 261 GYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
Y APE + S DVWS G L EL+ G+
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQ 145
+++ + VIG G FG VY+ + +S + VA+K++ + K E+ + ++H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQGKAFKN--RELQIMRKLDHC 73
Query: 146 NLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQDAA 201
N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LF 132
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVGTM 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS + +
Sbjct: 133 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICSR 186
Query: 261 GYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
Y APE + S DVWS G L EL+ G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQ 145
+++ + VIG G FG VY+ + +S + VA+K++ + K E+ + ++H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQGKAFKN--RELQIMRKLDHC 73
Query: 146 NLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQDAA 201
N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LF 132
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVGTM 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS + +
Sbjct: 133 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICSR 186
Query: 261 GYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
Y APE + S DVWS G L EL+ G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQ 145
+++ + VIG G FG VY+ + +S + VA+K++ + K E+ + ++H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQGKAFKN--RELQIMRKLDHC 73
Query: 146 NLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQDAA 201
N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQ-LF 132
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVGTM 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS + +
Sbjct: 133 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEPNVSX--ICSR 186
Query: 261 GYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
Y APE + S DVWS G L EL+ G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQ 145
+++ + VIG G FG VY+ + +S + VA+K++ + K E+ + ++H
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQDKRFKN--RELQIMRKLDHC 86
Query: 146 NLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQDAA 201
N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LF 145
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVGTM 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS + +
Sbjct: 146 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICSR 199
Query: 261 GYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
Y APE + S DVWS G L EL+ G+
Sbjct: 200 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 95/224 (42%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 29 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 85
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+P G + +L A R A
Sbjct: 86 F------PFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAA 134
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ +T +
Sbjct: 135 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT-----LC 185
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 186 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 229
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 95/224 (42%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 100
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+P G + +L A R A
Sbjct: 101 F------PFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAA 149
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ +T +
Sbjct: 150 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT-----LC 200
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQ 145
+++ + VIG G FG VY+ + +S + VA+K++ + K E+ + ++H
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQDKRFKN--RELQIMRKLDHC 85
Query: 146 NLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQDAA 201
N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LF 144
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVGTM 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS + +
Sbjct: 145 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--ICSR 198
Query: 261 GYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
Y APE + S DVWS G L EL+ G+
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 119/289 (41%), Gaps = 43/289 (14%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWM--TEVNF 138
+S NF + IGEG G V +++S VAVK++ R + + EV
Sbjct: 28 RSYLDNF---IKIGEGSTGIVCIATVRSSGK-----LVAVKKMDLRKQQRRELLFNEVVI 79
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
+ +H+N+V++ DE + V E++ G++ T + R+ Q
Sbjct: 80 MRDYQHENVVEMYNSYLVGDELWV----VMEFLEGGAL---------TDIVTHTRMNEEQ 126
Query: 199 DAARGLAYLHEGMDFQ---IIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTA 255
AA LA L +I RD KS +ILL KLSDFG E
Sbjct: 127 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKX 184
Query: 256 VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYL 315
+VGT + APE + D+WS G+ + E++ G P + +P L
Sbjct: 185 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP-------------YFNEPPL 231
Query: 316 SDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
K R + PRL+ + ++ L + LV++ R +E+L+
Sbjct: 232 KAMKMIRDNLPPRLKNLH--KVSPSLKGFLDRLLVRDPAQRATAAELLK 278
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQ 145
+++ + VIG G FG VY+ + +S + VA+K++ + K E+ + ++H
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQDKRFKN--RELQIMRKLDHC 74
Query: 146 NLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQDAA 201
N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LF 133
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVGTM 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS + +
Sbjct: 134 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEPNVSX--ICSR 187
Query: 261 GYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
Y APE + S DVWS G L EL+ G+
Sbjct: 188 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQ 145
+++ + VIG G FG VY+ + +S + VA+K++ + K E+ + ++H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQDKRFKN--RELQIMRKLDHC 73
Query: 146 NLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQDAA 201
N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LF 132
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVGTM 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS + +
Sbjct: 133 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--ICSR 186
Query: 261 GYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
Y APE + S DVWS G L EL+ G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQ 145
+++ + VIG G FG VY+ + +S + VA+K++ + K E+ + ++H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQDKRFKN--RELQIMRKLDHC 73
Query: 146 NLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQDAA 201
N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LF 132
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVGTM 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS + +
Sbjct: 133 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-QLVRGEPNVSX--ICSR 186
Query: 261 GYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
Y APE + S DVWS G L EL+ G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQ 145
+++ + VIG G FG VY+ + +S + VA+K++ + K E+ + ++H
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQDKRFKN--RELQIMRKLDHC 101
Query: 146 NLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQDAA 201
N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LF 160
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVGTM 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS + +
Sbjct: 161 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICSR 214
Query: 261 GYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
Y APE + S DVWS G L EL+ G+
Sbjct: 215 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQ 145
+++ + VIG G FG VY+ + +S + VA+K++ + K E+ + ++H
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQDKRFKN--RELQIMRKLDHC 107
Query: 146 NLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQDAA 201
N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LF 166
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVGTM 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS + +
Sbjct: 167 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICSR 220
Query: 261 GYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
Y APE + S DVWS G L EL+ G+
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQ 145
+++ + VIG G FG VY+ + +S + VA+K++ + K E+ + ++H
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQDKRFKN--RELQIMRKLDHC 109
Query: 146 NLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQDAA 201
N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LF 168
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVGTM 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS + +
Sbjct: 169 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICSR 222
Query: 261 GYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
Y APE + S DVWS G L EL+ G+
Sbjct: 223 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 101/224 (45%), Gaps = 30/224 (13%)
Query: 85 KNFSRSVV----IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLG 140
+ +R++V IG+G FG V++G + E VAVK R + W E
Sbjct: 38 RTIARTIVLQESIGKGRFGEVWRGKWRGEE-------VAVKIFSSRE-ERSWFREAEIYQ 89
Query: 141 IV--EHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
V H+N++ + D+ Q LV +Y +GS+ YL+ + T+ +K+A
Sbjct: 90 TVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMIKLAL 146
Query: 199 DAARGLAYLH-EGMDFQ----IIVRDFKSSNILLDEQWNAKLSDFGLA--RLGPSEGFTH 251
A GLA+LH E + Q I RD KS NIL+ + ++D GLA ++
Sbjct: 147 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 206
Query: 252 VSTAVVGTMGYAAPEYVQTG------RLAARSDVWSYGVFLYEL 289
VGT Y APE + R+D+++ G+ +E+
Sbjct: 207 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQ 145
+++ + VIG G FG VY+ + +S + VA+K++ + K E+ + ++H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQDKRFKN--RELQIMRKLDHC 73
Query: 146 NLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQDAA 201
N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LF 132
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVGTM 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS + +
Sbjct: 133 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--ICSR 186
Query: 261 GYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
Y APE + S DVWS G L EL+ G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQ 145
+++ + VIG G FG VY+ + +S + VA+K++ + K E+ + ++H
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQDKRFKN--RELQIMRKLDHC 111
Query: 146 NLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQDAA 201
N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LF 170
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVGTM 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS + +
Sbjct: 171 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICSR 224
Query: 261 GYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
Y APE + S DVWS G L EL+ G+
Sbjct: 225 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 106/238 (44%), Gaps = 33/238 (13%)
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
L I H N++ ++G C L+ +MP GS+ L + ++ + +K A
Sbjct: 61 LRIFSHPNVLPVLGAC--QSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFAL 118
Query: 199 DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVG 258
D ARG+A+LH ++ I S ++++DE A++S + F+ S +
Sbjct: 119 DMARGMAFLHT-LEPLIPRHALNSRSVMIDEDMTARISMADVK-------FSFQSPGRMY 170
Query: 259 TMGYAAPEYVQ-----TGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
+ APE +Q T R +A D+WS+ V L+EL+T R P ++
Sbjct: 171 APAWVAPEALQKKPEDTNRRSA--DMWSFAVLLWELVT------REVPFAD--------- 213
Query: 314 YLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVD 371
LS+ + ++ L + +S + +C+ ++ RPK ++ ++ K+ D
Sbjct: 214 -LSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 101/224 (45%), Gaps = 30/224 (13%)
Query: 85 KNFSRSVV----IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLG 140
+ +R++V IG+G FG V++G + E VAVK R + W E
Sbjct: 25 RTIARTIVLQESIGKGRFGEVWRGKWRGEE-------VAVKIFSSRE-ERSWFREAEIYQ 76
Query: 141 IV--EHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
V H+N++ + D+ Q LV +Y +GS+ YL+ + T+ +K+A
Sbjct: 77 TVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMIKLAL 133
Query: 199 DAARGLAYLH-EGMDFQ----IIVRDFKSSNILLDEQWNAKLSDFGLA--RLGPSEGFTH 251
A GLA+LH E + Q I RD KS NIL+ + ++D GLA ++
Sbjct: 134 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 193
Query: 252 VSTAVVGTMGYAAPEYVQTG------RLAARSDVWSYGVFLYEL 289
VGT Y APE + R+D+++ G+ +E+
Sbjct: 194 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 197 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAV 256
A + A GL +L II RD K N++LD + + K++DFG+ + +G T +
Sbjct: 448 AAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXF 502
Query: 257 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID 297
GT Y APE + D W++GV LYE++ G+ P +
Sbjct: 503 CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 119/289 (41%), Gaps = 43/289 (14%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWM--TEVNF 138
+S NF + IGEG G V +++S VAVK++ R + + EV
Sbjct: 30 RSYLDNF---IKIGEGSTGIVCIATVRSSGK-----LVAVKKMDLRKQQRRELLFNEVVI 81
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
+ +H+N+V++ DE + V E++ G++ T + R+ Q
Sbjct: 82 MRDYQHENVVEMYNSYLVGDELWV----VMEFLEGGAL---------TDIVTHTRMNEEQ 128
Query: 199 DAARGLAYLHEGMDFQ---IIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTA 255
AA LA L +I RD KS +ILL KLSDFG E
Sbjct: 129 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKX 186
Query: 256 VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYL 315
+VGT + APE + D+WS G+ + E++ G P + +P L
Sbjct: 187 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP-------------YFNEPPL 233
Query: 316 SDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
K R + PRL+ + ++ L + LV++ R +E+L+
Sbjct: 234 KAMKMIRDNLPPRLKNLH--KVSPSLKGFLDRLLVRDPAQRATAAELLK 280
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQ 145
+++ + VIG G FG VY+ + +S + VA+K++ + K E+ + ++H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQDKRFKN--RELQIMRKLDHC 73
Query: 146 NLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQDAA 201
N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LF 132
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVGTM 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS + +
Sbjct: 133 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICSR 186
Query: 261 GYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
Y APE + S DVWS G L EL+ G+
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQ 145
+++ + VIG G FG VY+ + +S + VA+K++ + K E+ + ++H
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQDKRFKN--RELQIMRKLDHC 77
Query: 146 NLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQDAA 201
N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LF 136
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVGTM 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS + +
Sbjct: 137 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVSX--ICSR 190
Query: 261 GYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
Y APE + S DVWS G L EL+ G+
Sbjct: 191 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQ 145
+++ + VIG G FG VY+ + +S + VA+K++ + K E+ + ++H
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQDKRFKN--RELQIMRKLDHC 78
Query: 146 NLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQDAA 201
N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LF 137
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVGTM 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS + +
Sbjct: 138 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICSR 191
Query: 261 GYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
Y APE + S DVWS G L EL+ G+
Sbjct: 192 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 34/179 (18%)
Query: 195 KIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVST 254
KIA + L +LH + +I RD K SN+L++ K+ DFG++ + +
Sbjct: 113 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 255 AVVGTMGYAAPEYV-----QTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQ 309
G Y APE + Q G + +SD+WS G+ + EL R P D
Sbjct: 171 ---GCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIELAILRFPYD-----------S 215
Query: 310 WVKPYLSDAKQFRQIVD---PRLEG-KYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
W P+ +Q +Q+V+ P+L K+S V S CL KN++ RP E+++
Sbjct: 216 WGTPF----QQLKQVVEEPSPQLPADKFSAEFVDFTSQ----CLKKNSKERPTYPELMQ 266
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 166 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 225
V EY G + +LS E + + + L YLH + ++ RD K N+
Sbjct: 228 FVMEYANGGELFFHLS--RERVFSEDRARFYGAEIVSALDYLHSEKN--VVYRDLKLENL 283
Query: 226 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 285
+LD+ + K++DFGL + G +G T GT Y APE ++ D W GV
Sbjct: 284 MLDKDGHIKITDFGLCKEGIKDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 341
Query: 286 LYELITGRRPI 296
+YE++ GR P
Sbjct: 342 MYEMMCGRLPF 352
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Query: 197 AQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAV 256
A + A GL +L II RD K N++LD + + K++DFG+ + +G T +
Sbjct: 127 AAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXF 181
Query: 257 VGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 311
GT Y APE + D W++GV LYE++ G+ P + E +L Q +
Sbjct: 182 CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG---EDEDELFQSI 233
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 108/259 (41%), Gaps = 45/259 (17%)
Query: 65 MSQRPSNLKEFT-------IAELKSATKN------FSRSVVIGEGGFGCVYKGLIKNSED 111
M+ S++KEF + + +S +N F R +G G FG V L+K+ E
Sbjct: 1 MASNSSDVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHKET 58
Query: 112 PS---------QKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGI 162
+ QKV V +KQ+ K + VNF LVKL D+
Sbjct: 59 GNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------PFLVKLEFSFKDNS---- 107
Query: 163 QRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKS 222
+V EY+P G + +L A R AQ YLH +I RD K
Sbjct: 108 NLYMVMEYVPGGEMFSHLRRIGRFXEPHA-RFYAAQ-IVLTFEYLHS---LDLIYRDLKP 162
Query: 223 SNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSY 282
N+L+D+Q +++DFG A+ + + GT Y APE + + D W+
Sbjct: 163 ENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWAL 217
Query: 283 GVFLYELITGRRPIDRNRP 301
GV +YE+ G P ++P
Sbjct: 218 GVLIYEMAAGYPPFFADQP 236
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQ 145
+++ + VIG G FG VY+ + +S + VA+K++ + K E+ + ++H
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGE-----LVAIKKVLQDKRFKN--RELQIMRKLDHC 152
Query: 146 NLVKL--VGYCADDDERGIQRLLVYEYMPNG--SVDQYLSPKSETILTWAMRLKIAQDAA 201
N+V+L Y + + + + LV +Y+P V ++ S +T+ ++L + Q
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LF 211
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA-KLSDFGLARLGPSEGFTHVSTAVVGTM 260
R LAY+H F I RD K N+LLD KL DFG A+ G +VS + +
Sbjct: 212 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-VRGEPNVS--YICSR 265
Query: 261 GYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
Y APE + S DVWS G L EL+ G+
Sbjct: 266 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 72/163 (44%), Gaps = 20/163 (12%)
Query: 141 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
+ H +++ L+ D E LV++ M G + YL+ K L+ I +
Sbjct: 156 VAGHPHIITLI----DSYESSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSL 209
Query: 201 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA-RLGPSEGFTHVSTAVVGT 259
+++LH I+ RD K NILLD+ +LSDFG + L P E + GT
Sbjct: 210 LEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRE----LCGT 262
Query: 260 MGYAAPEYVQTGR------LAARSDVWSYGVFLYELITGRRPI 296
GY APE ++ D+W+ GV L+ L+ G P
Sbjct: 263 PGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 95/231 (41%), Gaps = 35/231 (15%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KEWMTEVNFLGI 141
N+ +IG G +G VY KN+E VA+K++ R K + E+ L
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEK-----NVAIKKVNRMFEDLIDCKRILREITILNR 81
Query: 142 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 201
++ +++L DD L + + + + + K+ LT I +
Sbjct: 82 LKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLF--KTPIFLTEEHIKTILYNLL 139
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS-------- 253
G ++HE II RD K +N LL++ + K+ DFGLAR SE T++
Sbjct: 140 LGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEE 196
Query: 254 ------------TAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELIT 291
T+ V T Y APE + +S D+WS G EL+
Sbjct: 197 PGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 119/289 (41%), Gaps = 43/289 (14%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWM--TEVNF 138
+S NF + IGEG G V +++S VAVK++ R + + EV
Sbjct: 73 RSYLDNF---IKIGEGSTGIVCIATVRSSGK-----LVAVKKMDLRKQQRRELLFNEVVI 124
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
+ +H+N+V++ DE + V E++ G++ T + R+ Q
Sbjct: 125 MRDYQHENVVEMYNSYLVGDELWV----VMEFLEGGAL---------TDIVTHTRMNEEQ 171
Query: 199 DAARGLAYLHEGMDFQ---IIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTA 255
AA LA L +I RD KS +ILL KLSDFG E
Sbjct: 172 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKX 229
Query: 256 VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYL 315
+VGT + APE + D+WS G+ + E++ G P + +P L
Sbjct: 230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY-------------FNEPPL 276
Query: 316 SDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
K R + PRL+ + ++ L + LV++ R +E+L+
Sbjct: 277 KAMKMIRDNLPPRLKNLH--KVSPSLKGFLDRLLVRDPAQRATAAELLK 323
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 166 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 225
V EY G + +LS E + + + L YLH + ++ RD K N+
Sbjct: 225 FVMEYANGGELFFHLS--RERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENL 280
Query: 226 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 285
+LD+ + K++DFGL + G +G T GT Y APE ++ D W GV
Sbjct: 281 MLDKDGHIKITDFGLCKEGIKDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 338
Query: 286 LYELITGRRPI 296
+YE++ GR P
Sbjct: 339 MYEMMCGRLPF 349
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 22/244 (9%)
Query: 56 SEARPSYPSMSQRPSNLKEFTIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQK 115
S A P S +RP+ ++ + + + +G G +G V +S D
Sbjct: 22 SAAAPFTMSHKERPTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVC-----SSYDVKSG 76
Query: 116 VEVAVKQLGRRGGH----KEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEY 170
+++AVK+L R K E+ L ++H+N++ L+ + + + +
Sbjct: 77 LKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTH 136
Query: 171 MPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQ 230
+ ++ + K + + ++ I Q RGL Y+H II RD K SN+ ++E
Sbjct: 137 LMGADLNNIV--KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNED 190
Query: 231 WNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT-GRLAARSDVWSYGVFLYEL 289
K+ DFGLAR E T V T Y APE + D+WS G + EL
Sbjct: 191 CELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAEL 245
Query: 290 ITGR 293
+TGR
Sbjct: 246 LTGR 249
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 111/247 (44%), Gaps = 36/247 (14%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE----WMTEVNFLGIVEHQNL 147
++G+G FG V K +D + E AVK + + + + EV L ++H N+
Sbjct: 29 MLGKGSFGEVLK-----CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 148 VKLVGYCADDDERGIQRLLVYEYMPNGSV-DQYLSPKSETILTWAMRLKIAQDAARGLAY 206
+KL D I V E G + D+ + K + A +I + G+ Y
Sbjct: 84 MKLFEILEDSSSFYI----VGELYTGGELFDEIIKRKRFSEHDAA---RIIKQVFSGITY 136
Query: 207 LHEGMDFQIIVRDFKSSNILLDEQ---WNAKLSDFGLARLGPSEGFTHVSTAV--VGTMG 261
+H+ I+ RD K NILL+ + + K+ DFGL S F + +GT
Sbjct: 137 MHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGL-----STCFQQNTKMKDRIGTAY 188
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP--YLSDAK 319
Y APE V G + DVWS GV LY L++G P ++E +L+ V+ Y D
Sbjct: 189 YIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPPF---YGKNEYDILKRVETGKYAFDLP 244
Query: 320 QFRQIVD 326
Q+R I D
Sbjct: 245 QWRTISD 251
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 119/289 (41%), Gaps = 43/289 (14%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWM--TEVNF 138
+S NF + IGEG G V +++S VAVK++ R + + EV
Sbjct: 19 RSYLDNFIK---IGEGSTGIVCIATVRSSGK-----LVAVKKMDLRKQQRRELLFNEVVI 70
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
+ +H+N+V++ DE + V E++ G++ T + R+ Q
Sbjct: 71 MRDYQHENVVEMYNSYLVGDELWV----VMEFLEGGAL---------TDIVTHTRMNEEQ 117
Query: 199 DAARGLAYLHEGMDFQ---IIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTA 255
AA LA L +I RD KS +ILL KLSDFG E
Sbjct: 118 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKX 175
Query: 256 VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYL 315
+VGT + APE + D+WS G+ + E++ G P + +P L
Sbjct: 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP-------------YFNEPPL 222
Query: 316 SDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
K R + PRL+ + ++ L + LV++ R +E+L+
Sbjct: 223 KAMKMIRDNLPPRLKNLH--KVSPSLKGFLDRLLVRDPAQRATAAELLK 269
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 119/289 (41%), Gaps = 43/289 (14%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWM--TEVNF 138
+S NF + IGEG G V +++S VAVK++ R + + EV
Sbjct: 23 RSYLDNFIK---IGEGSTGIVCIATVRSSGK-----LVAVKKMDLRKQQRRELLFNEVVI 74
Query: 139 LGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
+ +H+N+V++ DE + V E++ G++ T + R+ Q
Sbjct: 75 MRDYQHENVVEMYNSYLVGDELWV----VMEFLEGGAL---------TDIVTHTRMNEEQ 121
Query: 199 DAARGLAYLHEGMDFQ---IIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTA 255
AA LA L +I RD KS +ILL KLSDFG E
Sbjct: 122 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKX 179
Query: 256 VVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYL 315
+VGT + APE + D+WS G+ + E++ G P + +P L
Sbjct: 180 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP-------------YFNEPPL 226
Query: 316 SDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
K R + PRL+ + ++ L + LV++ R +E+L+
Sbjct: 227 KAMKMIRDNLPPRLKNLH--KVSPSLKGFLDRLLVRDPAQRATAAELLK 273
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 29/240 (12%)
Query: 64 SMSQ-RPSNLKEF---TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVA 119
SMSQ RP+ ++ TI E+ +N S +G G +G V D + VA
Sbjct: 2 SMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVA 53
Query: 120 VKQLGRRGGH----KEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNG 174
VK+L R K E+ L ++H+N++ L+ + + + ++
Sbjct: 54 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA 113
Query: 175 SVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAK 234
++ + K + + ++ I Q RGL Y+H II RD K SN+ ++E K
Sbjct: 114 DLNNIV--KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELK 167
Query: 235 LSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
+ DFGLAR E T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 168 ILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 29/240 (12%)
Query: 64 SMSQ-RPSNLKEF---TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVA 119
SMSQ RP+ ++ TI E+ +N S +G G +G V D + VA
Sbjct: 12 SMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVA 63
Query: 120 VKQLGRRGGH----KEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNG 174
VK+L R K E+ L ++H+N++ L+ + + + ++
Sbjct: 64 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA 123
Query: 175 SVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAK 234
++ + K + + ++ I Q RGL Y+H II RD K SN+ ++E K
Sbjct: 124 DLNNIV--KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELK 177
Query: 235 LSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
+ DFGLAR E T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 178 ILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 29/240 (12%)
Query: 64 SMSQ-RPSNLKEF---TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVA 119
SMSQ RP+ ++ TI E+ +N S +G G +G V D + VA
Sbjct: 12 SMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVA 63
Query: 120 VKQLGRRGGH----KEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNG 174
VK+L R K E+ L ++H+N++ L+ + + + ++
Sbjct: 64 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA 123
Query: 175 SVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAK 234
++ + K + + ++ I Q RGL Y+H II RD K SN+ ++E K
Sbjct: 124 DLNNIV--KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELK 177
Query: 235 LSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
+ DFGLAR E T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 178 ILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 86 NFSRSVV----IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGI 141
+R++V IG+G FG V++G + E VAVK R + W E
Sbjct: 1 TIARTIVLQESIGKGRFGEVWRGKWRGEE-------VAVKIFSSRE-ERSWFREAEIYQT 52
Query: 142 V--EHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
V H+N++ + D+ Q LV +Y +GS+ YL+ + T+ +K+A
Sbjct: 53 VMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMIKLALS 109
Query: 200 AARGLAYLH-EGMDFQ----IIVRDFKSSNILLDEQWNAKLSDFGLA--RLGPSEGFTHV 252
A GLA+LH E + Q I RD KS NIL+ + ++D GLA ++
Sbjct: 110 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 169
Query: 253 STAVVGTMGYAAPEYVQTG------RLAARSDVWSYGVFLYEL 289
VGT Y APE + R+D+++ G+ +E+
Sbjct: 170 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 178
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 111/247 (44%), Gaps = 36/247 (14%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE----WMTEVNFLGIVEHQNL 147
++G+G FG V K +D + E AVK + + + + EV L ++H N+
Sbjct: 29 MLGKGSFGEVLK-----CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 148 VKLVGYCADDDERGIQRLLVYEYMPNGSV-DQYLSPKSETILTWAMRLKIAQDAARGLAY 206
+KL D I V E G + D+ + K + A +I + G+ Y
Sbjct: 84 MKLFEILEDSSSFYI----VGELYTGGELFDEIIKRKRFSEHDAA---RIIKQVFSGITY 136
Query: 207 LHEGMDFQIIVRDFKSSNILLDEQ---WNAKLSDFGLARLGPSEGFTHVSTAV--VGTMG 261
+H+ I+ RD K NILL+ + + K+ DFGL S F + +GT
Sbjct: 137 MHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGL-----STCFQQNTKMKDRIGTAY 188
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP--YLSDAK 319
Y APE V G + DVWS GV LY L++G P ++E +L+ V+ Y D
Sbjct: 189 YIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPPF---YGKNEYDILKRVETGKYAFDLP 244
Query: 320 QFRQIVD 326
Q+R I D
Sbjct: 245 QWRTISD 251
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 111/247 (44%), Gaps = 36/247 (14%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE----WMTEVNFLGIVEHQNL 147
++G+G FG V K +D + E AVK + + + + EV L ++H N+
Sbjct: 29 MLGKGSFGEVLK-----CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 148 VKLVGYCADDDERGIQRLLVYEYMPNGSV-DQYLSPKSETILTWAMRLKIAQDAARGLAY 206
+KL D I V E G + D+ + K + A +I + G+ Y
Sbjct: 84 MKLFEILEDSSSFYI----VGELYTGGELFDEIIKRKRFSEHDAA---RIIKQVFSGITY 136
Query: 207 LHEGMDFQIIVRDFKSSNILLDEQ---WNAKLSDFGLARLGPSEGFTHVSTAV--VGTMG 261
+H+ I+ RD K NILL+ + + K+ DFGL S F + +GT
Sbjct: 137 MHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGL-----STCFQQNTKMKDRIGTAY 188
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP--YLSDAK 319
Y APE V G + DVWS GV LY L++G P ++E +L+ V+ Y D
Sbjct: 189 YIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPPF---YGKNEYDILKRVETGKYAFDLP 244
Query: 320 QFRQIVD 326
Q+R I D
Sbjct: 245 QWRTISD 251
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 30/222 (13%)
Query: 87 FSRSVV----IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIV 142
+R++V IG+G FG V++G + E VAVK R + W E V
Sbjct: 1 IARTIVLQESIGKGRFGEVWRGKWRGEE-------VAVKIFSSRE-ERSWFREAEIYQTV 52
Query: 143 --EHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
H+N++ + D+ Q LV +Y +GS+ YL+ + T+ +K+A
Sbjct: 53 MLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMIKLALST 109
Query: 201 ARGLAYLH-EGMDFQ----IIVRDFKSSNILLDEQWNAKLSDFGLA--RLGPSEGFTHVS 253
A GLA+LH E + Q I RD KS NIL+ + ++D GLA ++
Sbjct: 110 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP 169
Query: 254 TAVVGTMGYAAPEYVQTG------RLAARSDVWSYGVFLYEL 289
VGT Y APE + R+D+++ G+ +E+
Sbjct: 170 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 54/250 (21%)
Query: 73 KEFT--IAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSE-----------DPSQKVEVA 119
K FT + E++ ++F VIG G FG V +KN+E + ++ E A
Sbjct: 60 KPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETA 119
Query: 120 VKQLGRR---GGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV 176
+ R G +W+T +++ A DE + LV +Y G +
Sbjct: 120 CFREERDVLVNGDCQWITALHY----------------AFQDENHL--YLVMDYYVGGDL 161
Query: 177 DQYLSPKSETILTWAMRLKIAQ-----DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQW 231
LS + + R I + D+ L Y+H RD K N+LLD
Sbjct: 162 LTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNG 212
Query: 232 NAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT-----GRLAARSDVWSYGVFL 286
+ +L+DFG + L ++ T S+ VGT Y +PE +Q G+ D WS GV +
Sbjct: 213 HIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCM 271
Query: 287 YELITGRRPI 296
YE++ G P
Sbjct: 272 YEMLYGETPF 281
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 19/209 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKV---EVAVKQLGRRGGHKEWMT-EVNFLGIVEHQNLV 148
+G+GGF ++ S+ +++V ++ K L + +E M+ E++ + HQ++V
Sbjct: 29 LGKGGFAKCFE----ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVV 84
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
G+ D+D +V E S+ + L + + + R + Q G YLH
Sbjct: 85 GFHGFFEDND----FVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ-IVLGCQYLH 138
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 268
++I RD K N+ L+E K+ DFGLA +G + GT Y APE +
Sbjct: 139 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKTLCGTPNYIAPEVL 193
Query: 269 QTGRLAARSDVWSYGVFLYELITGRRPID 297
+ DVWS G +Y L+ G+ P +
Sbjct: 194 SKKGHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 108/259 (41%), Gaps = 45/259 (17%)
Query: 65 MSQRPSNLKEFT-------IAELKSATKN------FSRSVVIGEGGFGCVYKGLIKNSED 111
M+ S++KEF + + +S +N F R +G G FG V L+K+ E
Sbjct: 1 MASNSSDVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVM--LVKHKET 58
Query: 112 PS---------QKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGI 162
+ QKV V +KQ+ K + VNF LVKL D+
Sbjct: 59 GNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------PFLVKLEFSFKDNS---- 107
Query: 163 QRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKS 222
+V EY+P G + +L A R AQ YLH +I RD K
Sbjct: 108 NLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAAQ-IVLTFEYLHS---LDLIYRDLKP 162
Query: 223 SNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSY 282
N+L+D+Q +++DFG A+ + + GT Y APE + + D W+
Sbjct: 163 ENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLCGTPEYLAPEIILSKGYNKAVDWWAL 217
Query: 283 GVFLYELITGRRPIDRNRP 301
GV +YE+ G P ++P
Sbjct: 218 GVLIYEMAAGYPPFFADQP 236
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 19/209 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKV---EVAVKQLGRRGGHKEWMT-EVNFLGIVEHQNLV 148
+G+GGF ++ S+ +++V ++ K L + +E M+ E++ + HQ++V
Sbjct: 25 LGKGGFAKCFE----ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVV 80
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
G+ D+D +V E S+ + L + + + R + Q G YLH
Sbjct: 81 GFHGFFEDND----FVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ-IVLGCQYLH 134
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 268
++I RD K N+ L+E K+ DFGLA +G + GT Y APE +
Sbjct: 135 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKTLCGTPNYIAPEVL 189
Query: 269 QTGRLAARSDVWSYGVFLYELITGRRPID 297
+ DVWS G +Y L+ G+ P +
Sbjct: 190 SKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 19/209 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKV---EVAVKQLGRRGGHKEWMT-EVNFLGIVEHQNLV 148
+G+GGF ++ S+ +++V ++ K L + +E M+ E++ + HQ++V
Sbjct: 47 LGKGGFAKCFE----ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVV 102
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
G+ D+D +V E S+ + L + + + R + Q G YLH
Sbjct: 103 GFHGFFEDND----FVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ-IVLGCQYLH 156
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 268
++I RD K N+ L+E K+ DFGLA +G + GT Y APE +
Sbjct: 157 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKVLCGTPNYIAPEVL 211
Query: 269 QTGRLAARSDVWSYGVFLYELITGRRPID 297
+ DVWS G +Y L+ G+ P +
Sbjct: 212 SKKGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 86 NFSRSVV----IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGI 141
+R++V IG+G FG V++G + E VAVK R + W E
Sbjct: 6 TIARTIVLQESIGKGRFGEVWRGKWRGEE-------VAVKIFSSRE-ERSWFREAEIYQT 57
Query: 142 V--EHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
V H+N++ + D+ Q LV +Y +GS+ YL+ + T+ +K+A
Sbjct: 58 VMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMIKLALS 114
Query: 200 AARGLAYLH-EGMDFQ----IIVRDFKSSNILLDEQWNAKLSDFGLA--RLGPSEGFTHV 252
A GLA+LH E + Q I RD KS NIL+ + ++D GLA ++
Sbjct: 115 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 174
Query: 253 STAVVGTMGYAAPEYVQTG------RLAARSDVWSYGVFLYEL 289
VGT Y APE + R+D+++ G+ +E+
Sbjct: 175 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 19/209 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKV---EVAVKQLGRRGGHKEWMT-EVNFLGIVEHQNLV 148
+G+GGF ++ S+ +++V ++ K L + +E M+ E++ + HQ++V
Sbjct: 25 LGKGGFAKCFE----ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVV 80
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
G+ D+D +V E S+ + L + + + R + Q G YLH
Sbjct: 81 GFHGFFEDND----FVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ-IVLGCQYLH 134
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 268
++I RD K N+ L+E K+ DFGLA +G + GT Y APE +
Sbjct: 135 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKTLCGTPNYIAPEVL 189
Query: 269 QTGRLAARSDVWSYGVFLYELITGRRPID 297
+ DVWS G +Y L+ G+ P +
Sbjct: 190 SKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 166 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 225
V EY G + +LS E + + + L YLH + ++ RD K N+
Sbjct: 87 FVMEYANGGELFFHLS--RERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENL 142
Query: 226 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 285
+LD+ + K++DFGL + G +G T GT Y APE ++ D W GV
Sbjct: 143 MLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 200
Query: 286 LYELITGRRPI 296
+YE++ GR P
Sbjct: 201 MYEMMCGRLPF 211
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 19/209 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKV---EVAVKQLGRRGGHKEWMT-EVNFLGIVEHQNLV 148
+G+GGF ++ S+ +++V ++ K L + +E M+ E++ + HQ++V
Sbjct: 23 LGKGGFAKCFE----ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVV 78
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
G+ D+D +V E S+ + L + + + R + Q G YLH
Sbjct: 79 GFHGFFEDND----FVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ-IVLGCQYLH 132
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 268
++I RD K N+ L+E K+ DFGLA +G + GT Y APE +
Sbjct: 133 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKVLCGTPNYIAPEVL 187
Query: 269 QTGRLAARSDVWSYGVFLYELITGRRPID 297
+ DVWS G +Y L+ G+ P +
Sbjct: 188 SKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 166 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 225
V EY G + +LS E + + + L YLH + ++ RD K N+
Sbjct: 85 FVMEYANGGELFFHLS--RERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENL 140
Query: 226 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 285
+LD+ + K++DFGL + G +G T GT Y APE ++ D W GV
Sbjct: 141 MLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 198
Query: 286 LYELITGRRPI 296
+YE++ GR P
Sbjct: 199 MYEMMCGRLPF 209
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 166 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 225
V EY G + +LS E + + + L YLH + ++ RD K N+
Sbjct: 86 FVMEYANGGELFFHLS--RERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENL 141
Query: 226 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVF 285
+LD+ + K++DFGL + G +G T GT Y APE ++ D W GV
Sbjct: 142 MLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 199
Query: 286 LYELITGRRPI 296
+YE++ GR P
Sbjct: 200 MYEMMCGRLPF 210
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 30/223 (13%)
Query: 86 NFSRSVV----IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGI 141
+R++V IG+G FG V++G + E VAVK R + W E
Sbjct: 3 TIARTIVLQESIGKGRFGEVWRGKWRGEE-------VAVKIFSSRE-ERSWFREAEIYQT 54
Query: 142 V--EHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQD 199
V H+N++ + D+ Q LV +Y +GS+ YL+ + T+ +K+A
Sbjct: 55 VMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMIKLALS 111
Query: 200 AARGLAYLH-EGMDFQ----IIVRDFKSSNILLDEQWNAKLSDFGLA--RLGPSEGFTHV 252
A GLA+LH E + Q I RD KS NIL+ + ++D GLA ++
Sbjct: 112 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA 171
Query: 253 STAVVGTMGYAAPEYVQTG------RLAARSDVWSYGVFLYEL 289
VGT Y APE + R+D+++ G+ +E+
Sbjct: 172 PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 19/209 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKV---EVAVKQLGRRGGHKEWMT-EVNFLGIVEHQNLV 148
+G+GGF ++ S+ +++V ++ K L + +E M+ E++ + HQ++V
Sbjct: 49 LGKGGFAKCFE----ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVV 104
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
G+ D+D +V E S+ + L + + + R + Q G YLH
Sbjct: 105 GFHGFFEDND----FVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQ-IVLGCQYLH 158
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 268
++I RD K N+ L+E K+ DFGLA +G + GT Y APE +
Sbjct: 159 RN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG--ERKKVLCGTPNYIAPEVL 213
Query: 269 QTGRLAARSDVWSYGVFLYELITGRRPID 297
+ DVWS G +Y L+ G+ P +
Sbjct: 214 SKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 29/240 (12%)
Query: 64 SMSQ-RPSNLKEF---TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVA 119
SMSQ RP+ ++ TI E+ +N S +G G +G V D + VA
Sbjct: 2 SMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVA 53
Query: 120 VKQLGRRGGH----KEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNG 174
VK+L R K E+ L ++H+N++ L+ + + + ++
Sbjct: 54 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA 113
Query: 175 SVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAK 234
++ + K + + ++ I Q RGL Y+H II RD K SN+ ++E K
Sbjct: 114 DLNNIV--KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELK 167
Query: 235 LSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
+ DFGLAR E T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 168 ILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 54/250 (21%)
Query: 73 KEFT--IAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSE-----------DPSQKVEVA 119
K FT + E++ ++F VIG G FG V +KN+E + ++ E A
Sbjct: 76 KPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETA 135
Query: 120 VKQLGRR---GGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV 176
+ R G +W+T +++ A DE + LV +Y G +
Sbjct: 136 CFREERDVLVNGDCQWITALHY----------------AFQDENHL--YLVMDYYVGGDL 177
Query: 177 DQYLSPKSETILTWAMRLKIAQ-----DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQW 231
LS + + R I + D+ L Y+H RD K N+LLD
Sbjct: 178 LTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNG 228
Query: 232 NAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT-----GRLAARSDVWSYGVFL 286
+ +L+DFG + L ++ T S+ VGT Y +PE +Q G+ D WS GV +
Sbjct: 229 HIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCM 287
Query: 287 YELITGRRPI 296
YE++ G P
Sbjct: 288 YEMLYGETPF 297
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 105/240 (43%), Gaps = 28/240 (11%)
Query: 63 PSMSQRPSNLKEF---TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVA 119
P +RP+ ++ TI E+ +N S +G G +G V D + VA
Sbjct: 2 PMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVA 53
Query: 120 VKQLGRRGGH----KEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNG 174
VK+L R K E+ L ++H+N++ L+ + + + ++
Sbjct: 54 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA 113
Query: 175 SVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAK 234
++ + K + + ++ I Q RGL Y+H II RD K SN+ ++E K
Sbjct: 114 DLNNIV--KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELK 167
Query: 235 LSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
+ DFGLAR E T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 168 ILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 111/259 (42%), Gaps = 31/259 (11%)
Query: 41 GSELTSQNVSAISVESEARPSYPSMSQRPSNLKEFTIAELKSATKNFSRSVVIGEGGFGC 100
G +L ++N+ S S+ RP++ TI E+ +N S +G G +G
Sbjct: 10 GVDLGTENLYFQSNASQERPTFYRQELNK------TIWEVPERYQNLSP---VGSGAYGS 60
Query: 101 VYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KEWMTEVNFLGIVEHQNLVKLVG-YCA 155
V D + VAVK+L R K E+ L ++H+N++ L+ +
Sbjct: 61 VCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 115
Query: 156 DDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQI 215
+ + ++ ++ + K + + ++ I Q RGL Y+H I
Sbjct: 116 ARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DI 169
Query: 216 IVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAA 275
I RD K SN+ ++E K+ DFGLAR E V T Y APE +
Sbjct: 170 IHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MXGYVATRWYRAPEIMLNWMHYN 224
Query: 276 RS-DVWSYGVFLYELITGR 293
++ D+WS G + EL+TGR
Sbjct: 225 QTVDIWSVGCIMAELLTGR 243
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 94/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+P G + +L A R A
Sbjct: 100 F------PFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFXEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 93/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY P G + +L A R A
Sbjct: 100 F------PFLVKLEFSFKDNS----NLYMVMEYAPGGEMFSHLRRIGRFXEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+++D+Q K++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 94/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 100
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+P G + +L A R A
Sbjct: 101 F------PFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFXEPHA-RFYAA 149
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 150 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 200
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 94/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+P G + +L A R A
Sbjct: 100 F------PFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFXEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 95/224 (42%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHKETGNHFAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F +V+ + Y D+ +V EY+P G + +L A R A
Sbjct: 100 FPFLVK-------LEYSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 95/224 (42%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHKETGNHFAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F +V+ + Y D+ +V EY+P G + +L A R A
Sbjct: 100 FPFLVK-------LEYSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 94/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 100
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+P G + +L A R A
Sbjct: 101 F------PFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAA 149
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 150 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 200
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S IG G +G V D + VAVK+L R K
Sbjct: 21 TIWEVPERYQNLSP---IGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 72
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 73 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 130
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 131 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE--- 183
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 184 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 95/224 (42%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHKETGNHFAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F +V+ + Y D+ +V EY+P G + +L A R A
Sbjct: 100 FPFLVK-------LEYSFKDNS---NLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 94/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 100
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+P G + +L A R A
Sbjct: 101 F------PFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAA 149
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 150 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 200
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 94/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 100
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+P G + +L A R A
Sbjct: 101 F------PFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAA 149
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 150 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 200
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 97/231 (41%), Gaps = 40/231 (17%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQ 145
+F +IG GGFG V+K K+ D V VK + EV L ++H
Sbjct: 13 DFKEIELIGSGGFGQVFKA--KHRIDGKTYVIRRVKYNNEKAER-----EVKALAKLDHV 65
Query: 146 NLVKLVGYCAD----DDERGIQRLLVYEYMP----------------------NGSVDQY 179
N+V G C D D E L +Y P G+++Q+
Sbjct: 66 NIVHYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQW 124
Query: 180 LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 239
+ + L + L++ + +G+ Y+H ++I RD K SNI L + K+ DFG
Sbjct: 125 IEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFG 181
Query: 240 LARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI 290
L ++G T GT+ Y +PE + + D+++ G+ L EL+
Sbjct: 182 LVTSLKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 94/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 64 FERIKTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 120
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+P G + +L A R A
Sbjct: 121 F------PFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAA 169
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 170 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 220
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 24/237 (10%)
Query: 84 TKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL---GRRGGHKEWMTEVNFLG 140
+ +F ++GEG +G V + P+ ++ VA+K++ + + E+ L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSA----THKPTGEI-VAIKKIEPFDKPLFALRTLREIKILK 64
Query: 141 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
+H+N++ + D + + + + + + +S ++ + ++ I Q
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIS--TQMLSDDHIQYFIYQ-T 121
Query: 201 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL--------GPSEGFTHV 252
R + LH +I RD K SN+L++ + K+ DFGLAR+ G
Sbjct: 122 LRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 253 STAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGRRPIDRNRPRSEQKLL 308
T V T Y APE + T +R+ DVWS G L EL RRPI R Q LL
Sbjct: 179 MTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLL 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 93/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 100
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY P G + +L A R A
Sbjct: 101 F------PFLVKLEFSFKDNS----NLYMVMEYAPGGEMFSHLRRIGRFSEPHA-RFYAA 149
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+++D+Q K++DFG A+ + +
Sbjct: 150 Q-IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLC 200
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 178
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 99/246 (40%), Gaps = 54/246 (21%)
Query: 77 IAELKSATKNFSRSVVIGEGGF-----------GCVYKGLIKNSEDPSQKVEVAVKQLGR 125
+ E++ +F VIG G F G VY I N D ++ EV+ + R
Sbjct: 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREER 112
Query: 126 R---GGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSP 182
G + W+T+++F A DE + LV EY G + LS
Sbjct: 113 DVLVNGDRRWITQLHF----------------AFQDENYL--YLVMEYYVGGDLLTLLSK 154
Query: 183 KSETILTWAMRLKIAQ-----DAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSD 237
E I R +A+ D+ L Y+H RD K NILLD + +L+D
Sbjct: 155 FGERIPAEMARFYLAEIVMAIDSVHRLGYVH---------RDIKPDNILLDRCGHIRLAD 205
Query: 238 FGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQT-------GRLAARSDVWSYGVFLYELI 290
FG ++G T S VGT Y +PE +Q G D W+ GVF YE+
Sbjct: 206 FGSCLKLRADG-TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMF 264
Query: 291 TGRRPI 296
G+ P
Sbjct: 265 YGQTPF 270
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 94/225 (41%), Gaps = 28/225 (12%)
Query: 81 KSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLG 140
++ ++ + +G+G +G V++G Q VAVK R K W E
Sbjct: 4 RTVARDITLLECVGKGRYGEVWRG-------SWQGENVAVKIFSSRD-EKSWFRETELYN 55
Query: 141 IV--EHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQ 198
V H+N++ + Q L+ Y GS+ YL T L L+I
Sbjct: 56 TVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL---TTLDTVSCLRIVL 112
Query: 199 DAARGLAYLH-EGMDFQ----IIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
A GLA+LH E Q I RD KS NIL+ + ++D GLA + S+ +
Sbjct: 113 SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMH-SQSTNQLD 171
Query: 254 TAV---VGTMGYAAPEY------VQTGRLAARSDVWSYGVFLYEL 289
VGT Y APE V R D+W++G+ L+E+
Sbjct: 172 VGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 23 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 74
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 75 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 132
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 133 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE--- 185
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 186 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 178
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 178
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 21 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 72
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 73 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 130
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 131 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 183
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 184 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 15 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 66
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 67 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 124
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 125 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 177
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 178 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 135 EVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRL 194
E+ + ++ H LV L DD+E +++YE+M G + + ++ ++ +
Sbjct: 98 EIQTMSVLRHPTLVNLHDAFEDDNEM----VMIYEFMSGGELFEKVA-DEHNKMSEDEAV 152
Query: 195 KIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA--KLSDFGL-ARLGPSEGFTH 251
+ + +GL ++HE + D K NI+ + + KL DFGL A L P +
Sbjct: 153 EYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK- 208
Query: 252 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
GT +AAPE + + +D+WS GV Y L++G P
Sbjct: 209 ---VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 250
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 24/237 (10%)
Query: 84 TKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL---GRRGGHKEWMTEVNFLG 140
+ +F ++GEG +G V + P+ ++ VA+K++ + + E+ L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSA----THKPTGEI-VAIKKIEPFDKPLFALRTLREIKILK 64
Query: 141 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
+H+N++ + D + + + + + + +S ++ + ++ I Q
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIS--TQMLSDDHIQYFIYQ-T 121
Query: 201 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL--------GPSEGFTHV 252
R + LH +I RD K SN+L++ + K+ DFGLAR+ G
Sbjct: 122 LRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 253 STAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGRRPIDRNRPRSEQKLL 308
T V T Y APE + T +R+ DVWS G L EL RRPI R Q LL
Sbjct: 179 MTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLL 234
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 98/223 (43%), Gaps = 17/223 (7%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
V+G GGFG V+ +K + ++ K+L +R G++ M E L V + +V L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL- 250
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA--ARGLAYLHE 209
A E LV M G + ++ E + I A GL +LH+
Sbjct: 251 ---AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ 307
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA---RLGPSEGFTHVSTAVVGTMGYAAPE 266
II RD K N+LLD+ N ++SD GLA + G ++ + GT G+ APE
Sbjct: 308 R---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-----TKGYAGTPGFMAPE 359
Query: 267 YVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQ 309
+ D ++ GV LYE+I R P + E K L+
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 402
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 94/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 100
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+P G + +L A R A
Sbjct: 101 F------PFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAA 149
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 150 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 200
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 178
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 94/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+P G + +L A R A
Sbjct: 100 F------PFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 178
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 94/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+P G + +L A R A
Sbjct: 100 F------PFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 21 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 72
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 73 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 130
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 131 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 183
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 184 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 13 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 64
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 65 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 122
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 123 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 175
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 176 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 12 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 63
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 64 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 121
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 122 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 174
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 175 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 23 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 74
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 75 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 132
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 133 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE--- 185
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 186 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 98/223 (43%), Gaps = 17/223 (7%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
V+G GGFG V+ +K + ++ K+L +R G++ M E L V + +V L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL- 250
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA--ARGLAYLHE 209
A E LV M G + ++ E + I A GL +LH+
Sbjct: 251 ---AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ 307
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA---RLGPSEGFTHVSTAVVGTMGYAAPE 266
II RD K N+LLD+ N ++SD GLA + G ++ + GT G+ APE
Sbjct: 308 R---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-----TKGYAGTPGFMAPE 359
Query: 267 YVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQ 309
+ D ++ GV LYE+I R P + E K L+
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 402
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 178
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 94/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+P G + +L A R A
Sbjct: 100 F------PFLVKLEFSFKDNS----NLYMVMEYVPGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 23 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 74
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 75 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 132
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 133 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 185
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 186 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 23 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 74
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 75 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 132
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 133 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE--- 185
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 186 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 93/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY P G + +L A R A
Sbjct: 100 F------PFLVKLEFSFKDNS----NLYMVMEYAPGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+++D+Q K++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 13 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 64
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 65 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 122
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 123 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 175
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 176 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 22 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 73
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 74 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 131
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 132 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 184
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 185 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 89/213 (41%), Gaps = 28/213 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIV--EHQNLVKL 150
+G+G +G V++G Q VAVK R K W E V H+N++
Sbjct: 16 VGKGRYGEVWRG-------SWQGENVAVKIFSSRD-EKSWFRETELYNTVMLRHENILGF 67
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH-E 209
+ Q L+ Y GS+ YL T L L+I A GLA+LH E
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 210 GMDFQ----IIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAV---VGTMGY 262
Q I RD KS NIL+ + ++D GLA + S+ + VGT Y
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMH-SQSTNQLDVGNNPRVGTKRY 183
Query: 263 AAPEY------VQTGRLAARSDVWSYGVFLYEL 289
APE V R D+W++G+ L+E+
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 98/223 (43%), Gaps = 17/223 (7%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
V+G GGFG V+ +K + ++ K+L +R G++ M E L V + +V L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL- 250
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA--ARGLAYLHE 209
A E LV M G + ++ E + I A GL +LH+
Sbjct: 251 ---AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ 307
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA---RLGPSEGFTHVSTAVVGTMGYAAPE 266
II RD K N+LLD+ N ++SD GLA + G ++ + GT G+ APE
Sbjct: 308 R---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-----TKGYAGTPGFMAPE 359
Query: 267 YVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQ 309
+ D ++ GV LYE+I R P + E K L+
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 402
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 21/207 (10%)
Query: 129 HKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETIL 188
H+E E++ L ++H N++KL D LV E+ G + + + + +
Sbjct: 90 HEEIYNEISLLKSLDHPNIIKLFDVFEDKK----YFYLVTEFYEGGELFEQIINRHKFDE 145
Query: 189 TWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQ---WNAKLSDFGLARLGP 245
A I + G+ YLH+ I+ RD K NILL+ + N K+ DFGL+
Sbjct: 146 CDAAN--IMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS 200
Query: 246 SEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQ 305
+ + +GT Y APE V + + DVWS GV +Y L+ G P +++Q
Sbjct: 201 KD---YKLRDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCGYPPFG---GQNDQ 253
Query: 306 KLLQWVK--PYLSDAKQFRQIVDPRLE 330
+++ V+ Y D ++ I D E
Sbjct: 254 DIIKKVEKGKYYFDFNDWKNISDEAKE 280
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 98/223 (43%), Gaps = 17/223 (7%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
V+G GGFG V+ +K + ++ K+L +R G++ M E L V + +V L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL- 250
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA--ARGLAYLHE 209
A E LV M G + ++ E + I A GL +LH+
Sbjct: 251 ---AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ 307
Query: 210 GMDFQIIVRDFKSSNILLDEQWNAKLSDFGLA---RLGPSEGFTHVSTAVVGTMGYAAPE 266
II RD K N+LLD+ N ++SD GLA + G ++ + GT G+ APE
Sbjct: 308 R---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-----TKGYAGTPGFMAPE 359
Query: 267 YVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQ 309
+ D ++ GV LYE+I R P + E K L+
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 402
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 13/156 (8%)
Query: 166 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 225
L+ +Y+ G + +LS + E +++ + + L +LH+ II RD K NI
Sbjct: 136 LILDYINGGELFTHLSQR-ERFTEHEVQIYVGE-IVLALEHLHK---LGIIYRDIKLENI 190
Query: 226 LLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDV--WSYG 283
LLD + L+DFGL++ ++ T + GT+ Y AP+ V+ G V WS G
Sbjct: 191 LLDSNGHVVLTDFGLSKEFVADE-TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLG 249
Query: 284 VFLYELITGRRPIDRNRPRSEQ-----KLLQWVKPY 314
V +YEL+TG P + ++ Q ++L+ PY
Sbjct: 250 VLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY 285
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 22 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 73
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 74 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 131
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 132 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 184
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 185 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 18 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 69
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 70 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 127
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 128 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 180
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 181 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 178
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KXQKLTDD 125
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 178
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 107/240 (44%), Gaps = 29/240 (12%)
Query: 64 SMSQ-RPSNLKEF---TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVA 119
SMSQ RP+ ++ TI E+ +N S +G G +G V D + VA
Sbjct: 12 SMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVA 63
Query: 120 VKQLGRRGGH----KEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNG 174
VK+L + K E+ L ++H+N++ L+ + + + ++
Sbjct: 64 VKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA 123
Query: 175 SVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAK 234
++ + K + + ++ I Q RGL Y+H II RD K SN+ ++E K
Sbjct: 124 DLNNIV--KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELK 177
Query: 235 LSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
+ DFGLAR E T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 178 ILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 178
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 107/244 (43%), Gaps = 29/244 (11%)
Query: 60 PSYPSMSQ-RPSNLKEF---TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQK 115
P MSQ RP+ ++ TI E+ +N S +G G +G V D
Sbjct: 16 PRGSHMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTG 67
Query: 116 VEVAVKQLGRRGGH----KEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEY 170
+ VAVK+L R K E+ L ++H+N++ L+ + + + +
Sbjct: 68 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 127
Query: 171 MPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQ 230
+ ++ + K + + ++ I Q RGL Y+H II RD K SN+ ++E
Sbjct: 128 LMGADLNNIV--KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNED 181
Query: 231 WNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYEL 289
K+ DFGLAR E T V T Y APE + ++ D+WS G + EL
Sbjct: 182 CELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
Query: 290 ITGR 293
+TGR
Sbjct: 237 LTGR 240
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 14 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 65
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 66 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 123
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 124 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 176
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 177 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 107/244 (43%), Gaps = 29/244 (11%)
Query: 60 PSYPSMSQ-RPSNLKEF---TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQK 115
P MSQ RP+ ++ TI E+ +N S +G G +G V D
Sbjct: 15 PRGSHMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTG 66
Query: 116 VEVAVKQLGRRGGH----KEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEY 170
+ VAVK+L R K E+ L ++H+N++ L+ + + + +
Sbjct: 67 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 126
Query: 171 MPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQ 230
+ ++ + K + + ++ I Q RGL Y+H II RD K SN+ ++E
Sbjct: 127 LMGADLNNIV--KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNED 180
Query: 231 WNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYEL 289
K+ DFGLAR E T V T Y APE + ++ D+WS G + EL
Sbjct: 181 CELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 235
Query: 290 ITGR 293
+TGR
Sbjct: 236 LTGR 239
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 21 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 72
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 73 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 130
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 131 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE--- 183
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 184 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 94/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +K++ K + VN
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKV-VKLKEIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY P G + +L A R A
Sbjct: 100 F------PFLVKLEFSFKDNS----NLYMVMEYAPGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+++D+Q K++DFGLA+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 101/234 (43%), Gaps = 37/234 (15%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKL 150
V IGEG G V K+S ++V V + L ++ + EV + +H N+V++
Sbjct: 51 VKIGEGSTGIVCLAREKHS---GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEM 107
Query: 151 V-GYCADDDERGIQRLLVYEYMPNGSVDQYLSP---KSETILTWAMRLKIAQDAARGLAY 206
Y G + ++ E++ G++ +S E I T + + + LAY
Sbjct: 108 YKSYLV-----GEELWVLMEFLQGGALTDIVSQVRLNEEQIAT------VCEAVLQALAY 156
Query: 207 LH-EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAV------VGT 259
LH +G +I RD KS +ILL KLSDFG +S V VGT
Sbjct: 157 LHAQG----VIHRDIKSDSILLTLDGRVKLSDFGFC--------AQISKDVPKRKXLVGT 204
Query: 260 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKP 313
+ APE + A D+WS G+ + E++ G P + P K L+ P
Sbjct: 205 PYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPP 258
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 39 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 90
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 91 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 148
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 149 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 201
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 202 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 27 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 78
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 79 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 136
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 137 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 189
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 190 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 135 EVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRL 194
E+ + ++ H LV L DD+E +++YE+M G + + ++ ++ +
Sbjct: 204 EIQTMSVLRHPTLVNLHDAFEDDNEM----VMIYEFMSGGELFEKVA-DEHNKMSEDEAV 258
Query: 195 KIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA--KLSDFGL-ARLGPSEGFTH 251
+ + +GL ++HE + D K NI+ + + KL DFGL A L P +
Sbjct: 259 EYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK- 314
Query: 252 VSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
GT +AAPE + + +D+WS GV Y L++G P
Sbjct: 315 ---VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 356
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 92/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K VN
Sbjct: 44 FERIRTLGTGSFGRVM--LVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRIQQAVN 100
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY P G + +L A R A
Sbjct: 101 F------PFLVKLEFSFKDNS----NLYMVLEYAPGGEMFSHLRRIGRFSEPHA-RFYAA 149
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q K++DFG A+ + +
Sbjct: 150 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR-----TWXLC 200
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KXQKLTDD 125
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE--- 178
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 27 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 78
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 79 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 136
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 137 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE--- 189
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 190 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 35/216 (16%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNFLGIVEHQNLV 148
IGEG +G V+K KN E + ++ VA+K++ G + E+ L ++H+N+V
Sbjct: 10 IGEGTYGTVFKA--KNRE--THEI-VALKRVRLDDDDEGVPSSALREICLLKELKHKNIV 64
Query: 149 KLVGYCADDDERGI------QRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAAR 202
+L D + + Q L Y NG +D E + ++ +L +
Sbjct: 65 RLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLD------PEIVKSFLFQL------LK 112
Query: 203 GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGF-THVSTAVVGTMG 261
GL + H ++ RD K N+L++ KL+DFGLAR + G +A V T+
Sbjct: 113 GLGFCHSR---NVLHRDLKPQNLLINRNGELKLADFGLAR---AFGIPVRCYSAEVVTLW 166
Query: 262 YAAPEYVQTGRLAARS-DVWSYGVFLYELITGRRPI 296
Y P+ + +L + S D+WS G EL RP+
Sbjct: 167 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + KS+ +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KSQKLTDD 125
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGL R E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE--- 178
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 93/213 (43%), Gaps = 28/213 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIV--EHQNLVKL 150
+G+G +G V++G Q VAVK R K W E V H+N++
Sbjct: 45 VGKGRYGEVWRG-------SWQGENVAVKIFSSRD-EKSWFRETELYNTVMLRHENILGF 96
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH-E 209
+ Q L+ Y GS+ YL T L L+I A GLA+LH E
Sbjct: 97 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIE 153
Query: 210 GMDFQ----IIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAV---VGTMGY 262
Q I RD KS NIL+ + ++D GLA + S+ + VGT Y
Sbjct: 154 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMH-SQSTNQLDVGNNPRVGTKRY 212
Query: 263 AAPEYV-QTGRLAA-----RSDVWSYGVFLYEL 289
APE + +T ++ R D+W++G+ L+E+
Sbjct: 213 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 29/216 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGGHKEWMT-EVNFLGIVEH 144
+G G F V K + S ++ A K + RRG +E + EV+ L ++H
Sbjct: 19 LGSGQFAVV-----KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 204
N++ L + E +L+ E + G + +L+ K LT + + G+
Sbjct: 74 PNVITL----HEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGV 127
Query: 205 AYLHEGMDFQIIVRDFKSSNILLDE----QWNAKLSDFGLARLGPSEGFTHVSTAVVGTM 260
YLH QI D K NI+L + + K+ DFGLA F + + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTP 181
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
+ APE V L +D+WS GV Y L++G P
Sbjct: 182 AFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 22 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 73
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 74 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 131
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 132 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE--- 184
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 185 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 24/237 (10%)
Query: 84 TKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL---GRRGGHKEWMTEVNFLG 140
+ +F ++GEG +G V + P+ ++ VA+K++ + + E+ L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSA----THKPTGEI-VAIKKIEPFDKPLFALRTLREIKILK 64
Query: 141 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
+H+N++ + D + + + + + + +S ++ + ++ I Q
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIS--TQMLSDDHIQYFIYQ-T 121
Query: 201 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL------GPSEGFTHVST 254
R + LH +I RD K SN+L++ + K+ DFGLAR+ SE S
Sbjct: 122 LRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 255 AV--VGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGRRPIDRNRPRSEQKLL 308
V V T Y APE + T +R+ DVWS G L EL RRPI R Q LL
Sbjct: 179 MVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLL 234
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 29/239 (12%)
Query: 64 SMSQRPSNLKEFTIAELK-SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
S S+R +N I + + K + IG G +G++ + D + VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGA-----QGIVVAAYDAILERNVAIKK 56
Query: 123 LGR----RGGHKEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVD 177
L R + K E+ + +V H+N++ L+ + Q + + + + ++
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLS 116
Query: 178 QY----LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA 233
Q L + + L + M + G+ +LH II RD K SNI++
Sbjct: 117 QVIQMELDHERMSYLLYQMLV--------GIKHLHSA---GIIHRDLKPSNIVVKSDATL 165
Query: 234 KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITG 292
K+ DFGLAR + G + + T V T Y APE + D+WS GV + E+I G
Sbjct: 166 KILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 94/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 64 FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 120
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+ G + +L A R A
Sbjct: 121 F------PFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 169
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ +T +
Sbjct: 170 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWT-----LC 220
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 92/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 100
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F L KL D+ +V EY P G + +L A R A
Sbjct: 101 F------PFLTKLEFSFKDNS----NLYMVMEYAPGGEMFSHLRRIGRFXEPHA-RFYAA 149
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+++D+Q K++DFG A+ + +
Sbjct: 150 Q-IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLC 200
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 29/239 (12%)
Query: 64 SMSQRPSNLKEFTIAELK-SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
S S+R +N I + + K + IG G +G++ + D + VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGA-----QGIVCAAYDAILERNVAIKK 56
Query: 123 LGR----RGGHKEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVD 177
L R + K E+ + +V H+N++ L+ + Q + + + + ++
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLS 116
Query: 178 QY----LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA 233
Q L + + L + M + G+ +LH II RD K SNI++
Sbjct: 117 QVIQMELDHERMSYLLYQMLV--------GIKHLHSA---GIIHRDLKPSNIVVKSDATL 165
Query: 234 KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITG 292
K+ DFGLAR + G + + T V T Y APE + D+WS GV + E+I G
Sbjct: 166 KILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 91/220 (41%), Gaps = 28/220 (12%)
Query: 82 SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR----RGGHKEWMTEVN 137
+ K + + IG G +G++ + D + VAVK+L R + K E+
Sbjct: 21 TVLKRYQQLKPIGSGA-----QGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELV 75
Query: 138 FLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQYLSPKSETILTWAM 192
L V H+N++ L+ E LV E M + L + + L + M
Sbjct: 76 LLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQM 135
Query: 193 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
G+ +LH II RD K SNI++ K+ DFGLAR + +
Sbjct: 136 LC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTACT---NFM 181
Query: 253 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITG 292
T V T Y APE + AA D+WS G + EL+ G
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 93/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 30 FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 86
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+ G + +L A R A
Sbjct: 87 F------PFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 135
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+DEQ +++DFG A+ + +
Sbjct: 136 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR-----TWXLC 186
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 187 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 230
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ D+GLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE--- 178
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 93/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY P G + +L A R A
Sbjct: 100 F------PFLVKLEFSFKDNS----NLYMVMEYAPGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+++D+Q +++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 97/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D VAVK+L R K
Sbjct: 22 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGHRVAVKKLSRPFQSIIHAKR 73
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 74 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 131
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 132 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 184
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 185 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 94/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +K++ K + VN
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKV-VKLKEIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY P G + +L A R A
Sbjct: 100 F------PFLVKLEFSFKDNS----NLYMVMEYAPGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+++D+Q +++DFGLA+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 97/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D VAVK+L R K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGHRVAVKKLSRPFQSIIHAKR 67
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 178
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 106/244 (43%), Gaps = 29/244 (11%)
Query: 60 PSYPSMSQ-RPSNLKEF---TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQK 115
P MSQ RP+ ++ TI E+ +N S +G G +G V D
Sbjct: 15 PRGSHMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTG 66
Query: 116 VEVAVKQLGRRGGH----KEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEY 170
VAVK+L R K E+ L ++H+N++ L+ + + + +
Sbjct: 67 HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 126
Query: 171 MPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQ 230
+ ++ + K + + ++ I Q RGL Y+H II RD K SN+ ++E
Sbjct: 127 LMGADLNNIV--KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNED 180
Query: 231 WNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYEL 289
K+ DFGLAR E T V T Y APE + ++ D+WS G + EL
Sbjct: 181 CELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 235
Query: 290 ITGR 293
+TGR
Sbjct: 236 LTGR 239
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 97/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D VAVK+L R K
Sbjct: 12 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGHRVAVKKLSRPFQSIIHAKR 63
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 64 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 121
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 122 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 174
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 175 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 90/207 (43%), Gaps = 23/207 (11%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEW----MTEVNFLGIVEHQNL 147
++GEG +G V K K++ VA+K+ K M E+ L + H+NL
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRI-----VAIKKFLESDDDKMVKKIAMREIKLLKQLRHENL 86
Query: 148 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQY-LSPKSETILTWAMRLKIAQDAARGLAY 206
V L+ C ++ + LV+E++ + +D L P L + + K G+ +
Sbjct: 87 VNLLEVC----KKKKRWYLVFEFVDHTILDDLELFPNG---LDYQVVQKYLFQIINGIGF 139
Query: 207 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPE 266
H II RD K NIL+ + KL DFG AR + G V V T Y APE
Sbjct: 140 CHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG--EVYDDEVATRWYRAPE 194
Query: 267 -YVQTGRLAARSDVWSYGVFLYELITG 292
V + DVW+ G + E+ G
Sbjct: 195 LLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 106/232 (45%), Gaps = 46/232 (19%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL--------GRRGGHKEWMTEVNFLGIVEH 144
+G+G +G V+K + + + + VAVK++ + +E M G H
Sbjct: 17 LGKGAYGIVWKSIDRRTGEV-----VAVKKIFDAFQNSTDAQRTFREIMILTELSG---H 68
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 204
+N+V L+ D++R + LV++YM D + ++ IL + + + +
Sbjct: 69 ENIVNLLNVLRADNDRDV--YLVFDYM---ETDLHAVIRA-NILEPVHKQYVVYQLIKVI 122
Query: 205 AYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-------------LGPSEGFTH 251
YLH G ++ RD K SNILL+ + + K++DFGL+R L +E +
Sbjct: 123 KYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTEN 179
Query: 252 ------VSTAVVGTMGYAAPE-YVQTGRLAARSDVWSYGVFLYELITGRRPI 296
+ T V T Y APE + + + D+WS G L E++ G +PI
Sbjct: 180 FDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPI 230
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 92/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 100
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F L KL D+ +V EY P G + +L A R A
Sbjct: 101 F------PFLTKLEFSFKDNS----NLYMVMEYAPGGEMFSHLRRIGRFSEPHA-RFYAA 149
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+++D+Q K++DFG A+ + +
Sbjct: 150 Q-IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLC 200
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 29/216 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGGHKEWMT-EVNFLGIVEH 144
+G G F V K + S ++ A K + RRG +E + EV+ L ++H
Sbjct: 19 LGSGQFAVV-----KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 204
N++ L + E +L+ E + G + +L+ K LT + + G+
Sbjct: 74 PNVITL----HEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGV 127
Query: 205 AYLHEGMDFQIIVRDFKSSNILLDE----QWNAKLSDFGLARLGPSEGFTHVSTAVVGTM 260
YLH QI D K NI+L + + K+ DFGLA F + + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTP 181
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
+ APE V L +D+WS GV Y L++G P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 92/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 44 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 100
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F L KL D+ +V EY P G + +L A R A
Sbjct: 101 F------PFLTKLEFSFKDNS----NLYMVMEYAPGGEMFSHLRRIGRFSEPHA-RFYAA 149
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+++D+Q K++DFG A+ + +
Sbjct: 150 Q-IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR-----TWXLC 200
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 106/244 (43%), Gaps = 29/244 (11%)
Query: 60 PSYPSMSQ-RPSNLKEF---TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQK 115
P MSQ RP+ ++ TI E+ +N S +G G +G V D
Sbjct: 16 PRGSHMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTG 67
Query: 116 VEVAVKQLGRRGGH----KEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEY 170
VAVK+L R K E+ L ++H+N++ L+ + + + +
Sbjct: 68 HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 127
Query: 171 MPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQ 230
+ ++ + K + + ++ I Q RGL Y+H II RD K SN+ ++E
Sbjct: 128 LMGADLNNIV--KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNED 181
Query: 231 WNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYEL 289
K+ DFGLAR E T V T Y APE + ++ D+WS G + EL
Sbjct: 182 CELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
Query: 290 ITGR 293
+TGR
Sbjct: 237 LTGR 240
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 47/227 (20%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KEWMTEVNFLG 140
K + +G G +G V + K S + +VA+K+L R K E+ L
Sbjct: 24 KTYVSPTHVGSGAYGSVCSAIDKRSGE-----KVAIKKLSRPFQSEIFAKRAYRELLLLK 78
Query: 141 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV----DQYL-SPKSETILTWAMRLK 195
++H+N++ L+ + P S+ D YL P +T L M LK
Sbjct: 79 HMQHENVIGLLDV----------------FTPASSLRNFYDFYLVMPFMQTDLQKIMGLK 122
Query: 196 IAQD--------AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 247
+++ +GL Y+H ++ RD K N+ ++E K+ DFGLAR +E
Sbjct: 123 FSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAE 179
Query: 248 GFTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + + ++ D+WS G + E++TG+
Sbjct: 180 -----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 15/207 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQ--KVEVAVKQLGR--RGGHKEWMTEVNFLGIVEHQNLV 148
+G+G F ++KG+ + D Q + EV +K L + R + + + + + H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
G C DE +LV E++ GS+D YL K++ + +L++A+ A + +L
Sbjct: 76 LNYGVCVCGDEN----ILVQEFVKFGSLDTYLK-KNKNCINILWKLEVAKQLAAAMHFLE 130
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVSTAVVGT-MGYAAPE 266
E +I + + NILL + + K + +L P T + ++ + + PE
Sbjct: 131 ENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPE 187
Query: 267 YVQTGR-LAARSDVWSYGVFLYELITG 292
++ + L +D WS+G L+E+ +G
Sbjct: 188 CIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 29/216 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGGHKEWMT-EVNFLGIVEH 144
+G G F V K + S ++ A K + RRG +E + EV+ L ++H
Sbjct: 19 LGSGKFAVV-----KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 204
N++ L + E +L+ E + G + +L+ K LT + + G+
Sbjct: 74 PNVITL----HEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGV 127
Query: 205 AYLHEGMDFQIIVRDFKSSNILLDE----QWNAKLSDFGLARLGPSEGFTHVSTAVVGTM 260
YLH QI D K NI+L + + K+ DFGLA F + + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTP 181
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
+ APE V L +D+WS GV Y L++G P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 29/216 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGGHKEWMT-EVNFLGIVEH 144
+G G F V K + S ++ A K + RRG +E + EV+ L ++H
Sbjct: 19 LGSGQFAVV-----KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 204
N++ L + E +L+ E + G + +L+ K LT + + G+
Sbjct: 74 PNVITL----HEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGV 127
Query: 205 AYLHEGMDFQIIVRDFKSSNILLDE----QWNAKLSDFGLARLGPSEGFTHVSTAVVGTM 260
YLH QI D K NI+L + + K+ DFGLA F + + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTP 181
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
+ APE V L +D+WS GV Y L++G P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 93/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 38 FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 94
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+ G + +L A R A
Sbjct: 95 F------PFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFXEPHA-RFYAA 143
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 144 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 194
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 195 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 238
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 36/212 (16%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLVG 152
IGEG +G VYK +N+ + ++ + G + E++ L ++H N+VKL
Sbjct: 10 IGEGTYGVVYKA--QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY- 66
Query: 153 YCADDDERGIQRLLVYEYMPNGSVDQYLSP---------KSETILTWAMRLKIAQDAARG 203
D + +LV+E++ DQ L +S T ++ ++L G
Sbjct: 67 ---DVIHTKKRLVLVFEHL-----DQDLKKLLDVCEGGLESVTAKSFLLQL------LNG 112
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAVVGTMG 261
+AY H D +++ RD K N+L++ + K++DFGLAR G P +TH V T+
Sbjct: 113 IAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH----EVVTLW 165
Query: 262 YAAPEYVQ-TGRLAARSDVWSYGVFLYELITG 292
Y AP+ + + + + D+WS G E++ G
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 36/212 (16%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLVG 152
IGEG +G VYK +N+ + ++ + G + E++ L ++H N+VKL
Sbjct: 10 IGEGTYGVVYKA--QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY- 66
Query: 153 YCADDDERGIQRLLVYEYMPNGSVDQYLSP---------KSETILTWAMRLKIAQDAARG 203
D + +LV+E++ DQ L +S T ++ ++L G
Sbjct: 67 ---DVIHTKKRLVLVFEHL-----DQDLKKLLDVCEGGLESVTAKSFLLQL------LNG 112
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAVVGTMG 261
+AY H D +++ RD K N+L++ + K++DFGLAR G P +TH V T+
Sbjct: 113 IAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH----EVVTLW 165
Query: 262 YAAPEYVQ-TGRLAARSDVWSYGVFLYELITG 292
Y AP+ + + + + D+WS G E++ G
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 93/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+ G + +L A R A
Sbjct: 100 F------PFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFXEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 29/216 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGGHKEWMT-EVNFLGIVEH 144
+G G F V K + S ++ A K + RRG +E + EV+ L ++H
Sbjct: 19 LGSGQFAVV-----KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 204
N++ L + E +L+ E + G + +L+ K LT + + G+
Sbjct: 74 PNVITL----HEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGV 127
Query: 205 AYLHEGMDFQIIVRDFKSSNILLDE----QWNAKLSDFGLARLGPSEGFTHVSTAVVGTM 260
YLH QI D K NI+L + + K+ DFGLA F + + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTP 181
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
+ APE V L +D+WS GV Y L++G P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 93/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+ G + +L A R A
Sbjct: 100 F------PFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFXEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 93/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+ G + +L A R A
Sbjct: 100 F------PFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFXEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 29/216 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGGHKEWMT-EVNFLGIVEH 144
+G G F V K + S ++ A K + RRG +E + EV+ L ++H
Sbjct: 19 LGSGQFAVV-----KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 204
N++ L + E +L+ E + G + +L+ K LT + + G+
Sbjct: 74 PNVITL----HEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGV 127
Query: 205 AYLHEGMDFQIIVRDFKSSNILLDE----QWNAKLSDFGLARLGPSEGFTHVSTAVVGTM 260
YLH QI D K NI+L + + K+ DFGLA F + + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTP 181
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
+ APE V L +D+WS GV Y L++G P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 93/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+ G + +L A R A
Sbjct: 100 F------PFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFAEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 29/216 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGGHKEWMT-EVNFLGIVEH 144
+G G F V K + S ++ A K + RRG +E + EV+ L ++H
Sbjct: 19 LGSGQFAVV-----KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 204
N++ L + E +L+ E + G + +L+ K LT + + G+
Sbjct: 74 PNVITL----HEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGV 127
Query: 205 AYLHEGMDFQIIVRDFKSSNILLDE----QWNAKLSDFGLARLGPSEGFTHVSTAVVGTM 260
YLH QI D K NI+L + + K+ DFGLA F + + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTP 181
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
+ APE V L +D+WS GV Y L++G P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 29/216 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGGHKEWMT-EVNFLGIVEH 144
+G G F V K + S ++ A K + RRG +E + EV+ L ++H
Sbjct: 18 LGSGQFAVV-----KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 72
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 204
N++ L + E +L+ E + G + +L+ K LT + + G+
Sbjct: 73 PNVITL----HEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGV 126
Query: 205 AYLHEGMDFQIIVRDFKSSNILLDE----QWNAKLSDFGLARLGPSEGFTHVSTAVVGTM 260
YLH QI D K NI+L + + K+ DFGLA F + + GT
Sbjct: 127 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTP 180
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
+ APE V L +D+WS GV Y L++G P
Sbjct: 181 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 29/216 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGGHKEWMT-EVNFLGIVEH 144
+G G F V K + S ++ A K + RRG +E + EV+ L ++H
Sbjct: 18 LGSGQFAVV-----KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 72
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 204
N++ L + E +L+ E + G + +L+ K LT + + G+
Sbjct: 73 PNVITL----HEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGV 126
Query: 205 AYLHEGMDFQIIVRDFKSSNILLDE----QWNAKLSDFGLARLGPSEGFTHVSTAVVGTM 260
YLH QI D K NI+L + + K+ DFGLA F + + GT
Sbjct: 127 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTP 180
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
+ APE V L +D+WS GV Y L++G P
Sbjct: 181 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 93/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 64 FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 120
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+ G + +L A R A
Sbjct: 121 F------PFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFXEPHA-RFYAA 169
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 170 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 220
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KEWMTEVNFLGIVEHQNLV 148
+G G +G V + D +VA+K+L R K E+ L + H+N++
Sbjct: 33 VGSGAYGAVCSAV-----DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVI 87
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
L+ D E Y MP D K E + ++ + Q +GL Y+H
Sbjct: 88 GLLDVFTPD-ETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQ-MLKGLRYIH 145
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 268
II RD K N+ ++E K+ DFGLAR SE V T Y APE +
Sbjct: 146 AA---GIIHRDLKPGNLAVNEDCELKILDFGLARQADSE-----MXGXVVTRWYRAPEVI 197
Query: 269 QT-GRLAARSDVWSYGVFLYELITGR 293
R D+WS G + E+ITG+
Sbjct: 198 LNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 29/216 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGGHKEWMT-EVNFLGIVEH 144
+G G F V K + S ++ A K + RRG +E + EV+ L ++H
Sbjct: 19 LGSGQFAVV-----KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 204
N++ L + E +L+ E + G + +L+ K LT + + G+
Sbjct: 74 PNVITL----HEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGV 127
Query: 205 AYLHEGMDFQIIVRDFKSSNILLDE----QWNAKLSDFGLARLGPSEGFTHVSTAVVGTM 260
YLH QI D K NI+L + + K+ DFGLA F + + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTP 181
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
+ APE V L +D+WS GV Y L++G P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 29/216 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGGHKEWMT-EVNFLGIVEH 144
+G G F V K + S ++ A K + RRG +E + EV+ L ++H
Sbjct: 19 LGSGQFAVV-----KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 204
N++ L + E +L+ E + G + +L+ K LT + + G+
Sbjct: 74 PNVITL----HEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGV 127
Query: 205 AYLHEGMDFQIIVRDFKSSNILLDE----QWNAKLSDFGLARLGPSEGFTHVSTAVVGTM 260
YLH QI D K NI+L + + K+ DFGLA F + + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTP 181
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
+ APE V L +D+WS GV Y L++G P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 79/179 (44%), Gaps = 34/179 (18%)
Query: 195 KIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVST 254
KIA + L +LH + +I RD K SN+L++ K DFG++ + +
Sbjct: 140 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 255 AVVGTMGYAAPEYV-----QTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQ 309
G Y APE + Q G + +SD+WS G+ EL R P D
Sbjct: 198 ---GCKPYXAPERINPELNQKG-YSVKSDIWSLGITXIELAILRFPYD-----------S 242
Query: 310 WVKPYLSDAKQFRQIVD---PRLEG-KYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
W P+ +Q +Q+V+ P+L K+S V S CL KN++ RP E+ +
Sbjct: 243 WGTPF----QQLKQVVEEPSPQLPADKFSAEFVDFTSQ----CLKKNSKERPTYPELXQ 293
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 107/242 (44%), Gaps = 28/242 (11%)
Query: 126 RGGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV-DQYLSPKS 184
+G E+ L ++H+N+V L D E LV + + G + D+ +
Sbjct: 61 KGKESSIENEIAVLRKIKHENIVAL----EDIYESPNHLYLVMQLVSGGELFDRIVEKGF 116
Query: 185 ETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILL---DEQWNAKLSDFGLA 241
T + ++ DA + YLH I+ RD K N+L DE+ +SDFGL+
Sbjct: 117 YTEKDASTLIRQVLDA---VYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLS 170
Query: 242 RLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI-DRNR 300
++ EG V + GT GY APE + + D WS GV Y L+ G P D N
Sbjct: 171 KM---EGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND 227
Query: 301 PRSEQKLL----QWVKPYLSD----AKQF-RQIVDPRLEGKYSLRLVSKLSHVA-NLCLV 350
+ +++L ++ PY D AK F R +++ +Y+ ++ +A + L
Sbjct: 228 SKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWIAGDTALN 287
Query: 351 KN 352
KN
Sbjct: 288 KN 289
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 36/212 (16%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLVG 152
IGEG +G VYK +N+ + ++ + G + E++ L ++H N+VKL
Sbjct: 10 IGEGTYGVVYKA--QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY- 66
Query: 153 YCADDDERGIQRLLVYEYMPNGSVDQYLSP---------KSETILTWAMRLKIAQDAARG 203
D + +LV+E++ DQ L +S T ++ ++L G
Sbjct: 67 ---DVIHTKKRLVLVFEHL-----DQDLKKLLDVCEGGLESVTAKSFLLQL------LNG 112
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LG-PSEGFTHVSTAVVGTMG 261
+AY H D +++ RD K N+L++ + K++DFGLAR G P +TH + T+
Sbjct: 113 IAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH----EIVTLW 165
Query: 262 YAAPEYVQ-TGRLAARSDVWSYGVFLYELITG 292
Y AP+ + + + + D+WS G E++ G
Sbjct: 166 YRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 29/216 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGGHKEWMT-EVNFLGIVEH 144
+G G F V K + S ++ A K + RRG +E + EV+ L ++H
Sbjct: 19 LGSGVFAVV-----KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 204
N++ L + E +L+ E + G + +L+ K LT + + G+
Sbjct: 74 PNVITL----HEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGV 127
Query: 205 AYLHEGMDFQIIVRDFKSSNILLDE----QWNAKLSDFGLARLGPSEGFTHVSTAVVGTM 260
YLH QI D K NI+L + + K+ DFGLA F + + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTP 181
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
+ APE V L +D+WS GV Y L++G P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 93/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+ G + +L A R A
Sbjct: 100 F------PFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLA 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 93/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+ G + +L A R A
Sbjct: 100 F------PFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 93/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+ G + +L A R A
Sbjct: 100 F------PFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 93/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+ G + +L A R A
Sbjct: 100 F------PFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 93/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 44 FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 100
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+ G + +L A R A
Sbjct: 101 F------PFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 149
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 150 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 200
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 93/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+ G + +L A R A
Sbjct: 100 F------PFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N + +G G +G V D VAVK+L R K
Sbjct: 26 TIWEVPERYQNLAP---VGSGAYGSVCAAF-----DTKTGHRVAVKKLSRPFQSIIHAKR 77
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 78 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 135
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 136 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 188
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 189 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 103/239 (43%), Gaps = 29/239 (12%)
Query: 64 SMSQRPSNLKEFTIAELK-SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
S S+R +N I + + K + IG G +G++ + D + VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGA-----QGIVCAAYDAILERNVAIKK 56
Query: 123 LGR----RGGHKEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVD 177
L R + K E+ + +V H+N++ L+ + Q + + + + ++
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLS 116
Query: 178 QY----LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA 233
Q L + + L + M + G+ +LH II RD K SNI++
Sbjct: 117 QVIQMELDHERMSYLLYQMLV--------GIKHLHSA---GIIHRDLKPSNIVVKSDATL 165
Query: 234 KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITG 292
K+ DFGLAR + G + + T V T Y APE + D+WS G + E+I G
Sbjct: 166 KILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D VAVK+L R K
Sbjct: 12 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGHRVAVKKLSRPFQSIIHAKR 63
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K +
Sbjct: 64 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCAKLTDD 121
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E
Sbjct: 122 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 174
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 175 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 93/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+ G + +L A R A
Sbjct: 100 F------PFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLX 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 35/216 (16%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL----GRRGGHKEWMTEVNFLGIVEHQNLV 148
IGEG +G V+K KN E + ++ VA+K++ G + E+ L ++H+N+V
Sbjct: 10 IGEGTYGTVFKA--KNRE--THEI-VALKRVRLDDDDEGVPSSALREICLLKELKHKNIV 64
Query: 149 KLVGYCADDDERGI------QRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAAR 202
+L D + + Q L Y NG +D E + ++ +L +
Sbjct: 65 RLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLD------PEIVKSFLFQL------LK 112
Query: 203 GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGF-THVSTAVVGTMG 261
GL + H ++ RD K N+L++ KL++FGLAR + G +A V T+
Sbjct: 113 GLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLAR---AFGIPVRCYSAEVVTLW 166
Query: 262 YAAPEYVQTGRLAARS-DVWSYGVFLYELITGRRPI 296
Y P+ + +L + S D+WS G EL RP+
Sbjct: 167 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 104/224 (46%), Gaps = 20/224 (8%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR----RGGHKEWMTEVNFLG 140
+ F+ ++G+G FG V + +K ED S V+VAVK L +E++ E +
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQ-EDGS-FVKVAVKMLKADIIASSDIEEFLREAACMK 80
Query: 141 IVEHQNLVKLVGYCADDDERGIQRL----LVYEYMPNGSVDQYL--SPKSETILTWAMR- 193
+H ++ KLVG +G RL ++ +M +G + +L S E ++
Sbjct: 81 EFDHPHVAKLVGVSLRSRAKG--RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQT 138
Query: 194 -LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
++ D A G+ YL I RD + N +L E ++DFGL+R S +
Sbjct: 139 LVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQ 195
Query: 253 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-GRRP 295
A + + A E + SDVW++GV ++E++T G+ P
Sbjct: 196 GCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 29/216 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGGHKEWMT-EVNFLGIVEH 144
+G G F V K + S ++ A K + RRG +E + EV+ L ++H
Sbjct: 19 LGSGQFAVV-----KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 204
N++ L + E +L+ E + G + +L+ K LT + + G+
Sbjct: 74 PNVITL----HEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGV 127
Query: 205 AYLHEGMDFQIIVRDFKSSNILLDE----QWNAKLSDFGLARLGPSEGFTHVSTAVVGTM 260
YLH QI D K NI+L + + K+ DFGLA F + + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTP 181
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
+ APE V L +D+WS GV Y L++G P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 101/207 (48%), Gaps = 15/207 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQ--KVEVAVKQLGR--RGGHKEWMTEVNFLGIVEHQNLV 148
+G+G F ++KG+ + D Q + EV +K L + R + + + + + H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 149 KLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
G C DE +LV E++ GS+D YL K++ + +L++A+ A + +L
Sbjct: 76 LNYGVCFCGDEN----ILVQEFVKFGSLDTYLK-KNKNCINILWKLEVAKQLAWAMHFLE 130
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLG-PSEGFTHVSTAVVGT-MGYAAPE 266
E +I + + NILL + + K + +L P T + ++ + + PE
Sbjct: 131 EN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPE 187
Query: 267 YVQTGR-LAARSDVWSYGVFLYELITG 292
++ + L +D WS+G L+E+ +G
Sbjct: 188 CIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 29/226 (12%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D VAVK+L R K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGHRVAVKKLSRPFQSIIHAKR 67
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE--G 248
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E G
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG 181
Query: 249 FTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
F V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 182 F-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 92/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+ G + +L A R A
Sbjct: 100 F------PFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P + P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEP 243
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 29/216 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGGHKEWMT-EVNFLGIVEH 144
+G G F V K + S ++ A K + RRG +E + EV+ L ++H
Sbjct: 19 LGSGQFAVV-----KKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 204
N++ L + E +L+ E + G + +L+ K LT + + G+
Sbjct: 74 PNVITL----HEVYENKTDVILIGELVAGGELFDFLAEKES--LTEEEATEFLKQILNGV 127
Query: 205 AYLHEGMDFQIIVRDFKSSNILLDE----QWNAKLSDFGLARLGPSEGFTHVSTAVVGTM 260
YLH QI D K NI+L + + K+ DFGLA F + + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH---KIDFGNEFKNIFGTP 181
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
+ APE V L +D+WS GV Y L++G P
Sbjct: 182 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 29/226 (12%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D VAVK+L R K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGHRVAVKKLSRPFQSIIHAKR 67
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE--G 248
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E G
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG 181
Query: 249 FTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
F V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 182 F-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ FGLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE--- 178
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 29/226 (12%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D VAVK+L R K
Sbjct: 12 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGHRVAVKKLSRPFQSIIHAKR 63
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 64 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 121
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE--G 248
++ I Q RGL Y+H II RD K SN+ ++E K+ DFGLAR E G
Sbjct: 122 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG 177
Query: 249 FTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
F V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 178 F-------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 102/239 (42%), Gaps = 29/239 (12%)
Query: 64 SMSQRPSNLKEFTIAELK-SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
S S+R +N I + + K + IG G +G++ + D + VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGA-----QGIVCAAYDAILERNVAIKK 56
Query: 123 LGR----RGGHKEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVD 177
L R + K E+ + +V H+N++ L+ + Q + + + + ++
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLS 116
Query: 178 QY----LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA 233
Q L + + L + M G+ +LH II RD K SNI++
Sbjct: 117 QVIQMELDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDATL 165
Query: 234 KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITG 292
K+ DFGLAR + G + + T V T Y APE + D+WS G + E+I G
Sbjct: 166 KILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 93/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FERIKTLGTGSFGRVM--LVKHMETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+ G + +L A R A
Sbjct: 100 F------PFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 90/215 (41%), Gaps = 28/215 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLVG 152
+G G VY+ K ++ P A+K L + K TE+ L + H N++KL
Sbjct: 61 LGRGATSIVYRCKQKGTQKP-----YALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKL-- 113
Query: 153 YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAAR----GLAYLH 208
+ E + LV E + G + + K + A DA + +AYLH
Sbjct: 114 --KEIFETPTEISLVLELVTGGELFDRIVEKG------YYSERDAADAVKQILEAVAYLH 165
Query: 209 EGMDFQIIVRDFKSSNILLDE---QWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAP 265
E I+ RD K N+L K++DFGL+++ + V GT GY AP
Sbjct: 166 EN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK---TVCGTPGYCAP 219
Query: 266 EYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNR 300
E ++ D+WS G+ Y L+ G P R
Sbjct: 220 EILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER 254
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 40/218 (18%)
Query: 93 IGEGGFGCVYKGLIK-----------NSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGI 141
+G G FG V++ + K N+ P K V E++ +
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVK--------------NEISIMNQ 104
Query: 142 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 201
+ H L+ L D E + +L+ E++ G + ++ + + ++ A + + A
Sbjct: 105 LHHPKLINL----HDAFEDKYEMVLILEFLSGGELFDRIAAE-DYKMSEAEVINYMRQAC 159
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQ--WNAKLSDFGLA-RLGPSEGFTHVSTAVVG 258
GL ++HE I+ D K NI+ + + + K+ DFGLA +L P E V+TA
Sbjct: 160 EGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE-IVKVTTA--- 212
Query: 259 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
T +AAPE V + +D+W+ GV Y L++G P
Sbjct: 213 TAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPF 250
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ D GLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE--- 178
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 105/244 (43%), Gaps = 29/244 (11%)
Query: 60 PSYPSMSQ-RPSNLKEF---TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQK 115
P MSQ RP+ ++ TI E+ +N S +G G +G V D
Sbjct: 16 PRGSHMSQERPTFYRQELNKTIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTG 67
Query: 116 VEVAVKQLGRRGGH----KEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEY 170
VAVK+L R K E+ L ++H+N++ L+ + + + +
Sbjct: 68 HRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTH 127
Query: 171 MPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQ 230
+ ++ + K + + ++ I Q RGL Y+H II RD K SN+ ++E
Sbjct: 128 LMGADLNNIV--KCQKLTDDHVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNED 181
Query: 231 WNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYEL 289
K+ DFGLAR E V T Y APE + ++ D+WS G + EL
Sbjct: 182 CELKILDFGLARHTDDE-----MXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
Query: 290 ITGR 293
+TGR
Sbjct: 237 LTGR 240
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 21/211 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG--RRGGHKEWMT-EVNFLGIVEHQNLVK 149
+G G F V K K + + ++L RRG +E + EVN L + H N++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
L D E +L+ E + G + +L+ K LT + + G+ YLH
Sbjct: 73 L----HDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVHYLHS 126
Query: 210 GMDFQIIVRDFKSSNILLDEQW----NAKLSDFGLA-RLGPSEGFTHVSTAVVGTMGYAA 264
+I D K NI+L ++ KL DFG+A ++ F ++ GT + A
Sbjct: 127 K---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI----FGTPEFVA 179
Query: 265 PEYVQTGRLAARSDVWSYGVFLYELITGRRP 295
PE V L +D+WS GV Y L++G P
Sbjct: 180 PEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ D GLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE--- 178
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 93/212 (43%), Gaps = 21/212 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLG--RRGGHKEWMT-EVNFLGIVEHQNLVK 149
+G G F V K K + + ++L RRG +E + EVN L + H N++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHE 209
L D E +L+ E + G + +L+ K LT + + G+ YLH
Sbjct: 80 L----HDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVHYLHS 133
Query: 210 GMDFQIIVRDFKSSNILLDEQW----NAKLSDFGLA-RLGPSEGFTHVSTAVVGTMGYAA 264
+I D K NI+L ++ KL DFG+A ++ F ++ GT + A
Sbjct: 134 K---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI----FGTPEFVA 186
Query: 265 PEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
PE V L +D+WS GV Y L++G P
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 93/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+ G + +L A R A
Sbjct: 100 F------PFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +Y++ G P ++P
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQP 243
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 93/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+ G + +L A R A
Sbjct: 100 F------PFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+++D+Q +++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y APE + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 101/239 (42%), Gaps = 29/239 (12%)
Query: 64 SMSQRPSNLKEFTIAELK-SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
S S+R +N I + + K + IG G +G++ + D + VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGA-----QGIVCAAYDAILERNVAIKK 56
Query: 123 LGR----RGGHKEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVD 177
L R + K E+ + V H+N++ L+ + Q + + + + ++
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLS 116
Query: 178 QY----LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA 233
Q L + + L + M G+ +LH II RD K SNI++
Sbjct: 117 QVIQMELDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTL 165
Query: 234 KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITG 292
K+ DFGLAR + G + + T V T Y APE + D+WS G + E+I G
Sbjct: 166 KILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 103/240 (42%), Gaps = 56/240 (23%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK--EWMTEVNFLGIVE 143
+F V+G+G FG V K +N+ D A+K++ R K ++EV L +
Sbjct: 7 DFEEIAVLGQGAFGQVVKA--RNALDSRY---YAIKKI-RHTEEKLSTILSEVMLLASLN 60
Query: 144 HQNLVKLVGYCADDDERGIQR-----------LLVYEYMPNGSVDQYLSPKSETILT--- 189
HQ +V+ Y A + R + + EY NG++ Y SE +
Sbjct: 61 HQYVVRY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTL--YDLIHSENLNQQRD 116
Query: 190 --WAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR----- 242
W + +I + L+Y+H II RD K NI +DE N K+ DFGLA+
Sbjct: 117 EYWRLFRQILE----ALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 243 -----------LGPSEGFTHVSTAVVGTMGYAAPEYVQ-TGRLAARSDVWSYGVFLYELI 290
G S+ T+ +GT Y A E + TG + D++S G+ +E+I
Sbjct: 170 LDILKLDSQNLPGSSDNL----TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 113/282 (40%), Gaps = 51/282 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
++G GGFG VY G+ S + VA+K + + +W N + L+K V
Sbjct: 15 LLGSGGFGSVYSGI-----RVSDNLPVAIKHV-EKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 152 --GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARGLAY- 206
G+ G+ RLL + P+ V + + P + R + ++ AR +
Sbjct: 69 SSGFS------GVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQ 122
Query: 207 ----LHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
+ + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 123 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRV 178
Query: 262 YAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQ 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 179 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF------------ 226
Query: 321 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
FRQ R+ S+ H+ CL RP E+
Sbjct: 227 FRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 97/224 (43%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D + VAVK+L R K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGLRVAVKKLSRPFQSIIHAKR 67
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ D GLAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE--- 178
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 19/177 (10%)
Query: 125 RRGGHKEWMT-EVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPK 183
RRG +E + EVN L + H N++ L D E +L+ E + G + +L+ K
Sbjct: 68 RRGVSREEIEREVNILREIRHPNIITL----HDIFENKTDVVLILELVSGGELFDFLAEK 123
Query: 184 SETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQW----NAKLSDFG 239
LT + + G+ YLH +I D K NI+L ++ KL DFG
Sbjct: 124 ES--LTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFG 178
Query: 240 LA-RLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 295
+A ++ F ++ GT + APE V L +D+WS GV Y L++G P
Sbjct: 179 IAHKIEAGNEFKNI----FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 18/226 (7%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGG--HKEWMTEVNFLGIVEHQNLVK 149
VIG+G F V + + + + V V + G ++ E + +++H ++V+
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSET--ILTWAMRLKIAQDAARGLAYL 207
L+ + D +V+E+M + + +++ + + A+ + L Y
Sbjct: 91 LLETYSSDG----MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 208 HEGMDFQIIVRDFKSSNILLDEQWNA---KLSDFGLA-RLGPSEGFTHVSTAVVGTMGYA 263
H D II RD K N+LL + N+ KL DFG+A +LG S V+ VGT +
Sbjct: 147 H---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGES---GLVAGGRVGTPHFM 200
Query: 264 APEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQ 309
APE V+ DVW GV L+ L++G P + R + +++
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIK 246
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 100/247 (40%), Gaps = 33/247 (13%)
Query: 130 KEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILT 189
+++ E L I H N++ ++G C L+ + P GS+ L + ++
Sbjct: 52 RDFNEECPRLRIFSHPNVLPVLGAC--QSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVD 109
Query: 190 WAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGF 249
+ +K A D ARG A+LH ++ I S ++ +DE A++S + F
Sbjct: 110 QSQAVKFALDXARGXAFLHT-LEPLIPRHALNSRSVXIDEDXTARISXADVK-------F 161
Query: 250 THVSTAVVGTMGYAAPEYVQ-----TGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSE 304
+ S + APE +Q T R +A D WS+ V L+EL+T P
Sbjct: 162 SFQSPGRXYAPAWVAPEALQKKPEDTNRRSA--DXWSFAVLLWELVTREVPFAD------ 213
Query: 305 QKLLQWVKPYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
LS+ + ++ L + +S + +C ++ RPK ++
Sbjct: 214 ----------LSNXEIGXKVALEGLRPTIPPGISPHVSKLXKICXNEDPAKRPKFDXIVP 263
Query: 365 MVNKIVD 371
++ K D
Sbjct: 264 ILEKXQD 270
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 101/239 (42%), Gaps = 29/239 (12%)
Query: 64 SMSQRPSNLKEFTIAELK-SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
S S+R +N I + + K + IG G +G++ + D + VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGA-----QGIVCAAYDAILERNVAIKK 56
Query: 123 LGR----RGGHKEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVD 177
L R + K E+ + V H+N++ L+ + Q + + + + ++
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 116
Query: 178 QY----LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA 233
Q L + + L + M G+ +LH II RD K SNI++
Sbjct: 117 QVIQMELDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTL 165
Query: 234 KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITG 292
K+ DFGLAR + G + + T V T Y APE + D+WS G + E+I G
Sbjct: 166 KILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 24/186 (12%)
Query: 122 QLGRRGGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV---DQ 178
++ + + ++ E+ + ++++ + G + DE I +YEYM N S+ D+
Sbjct: 80 KISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYI----IYEYMENDSILKFDE 135
Query: 179 YLS--PKSETILTWAMRLK-IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKL 235
Y K+ T +K I + +Y+H + I RD K SNIL+D+ KL
Sbjct: 136 YFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKL 193
Query: 236 SDFGLARLGPSEGFTHVSTAVVGTMG---YAAPEYV--QTGRLAARSDVWSYGVFLYELI 290
SDFG E V + G+ G + PE+ ++ A+ D+WS G+ LY +
Sbjct: 194 SDFG-------ESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMF 246
Query: 291 TGRRPI 296
P
Sbjct: 247 YNVVPF 252
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 114/286 (39%), Gaps = 51/286 (17%)
Query: 81 KSATKNFSRSVVIGEGGF------------GCVYKGLIKNSEDPSQKVEVAVKQLGR--- 125
KS N SV +G+ F G +G++ + D VA+K+L R
Sbjct: 41 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 100
Query: 126 -RGGHKEWMTEVNFLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQY 179
+ K E+ + V H+N++ L+ E LV E M +
Sbjct: 101 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 160
Query: 180 LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 239
L + + L + M G+ +LH II RD K SNI++ K+ DFG
Sbjct: 161 LDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 209
Query: 240 LARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI------TGR 293
LAR + G + + T V T Y APE + D+WS G + E++ GR
Sbjct: 210 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266
Query: 294 RPIDR-NR---------PRSEQKLLQWVKPYLSDAKQFRQIVDPRL 329
ID+ N+ P +KL V+ Y+ + ++ + P+L
Sbjct: 267 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 312
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 101/239 (42%), Gaps = 29/239 (12%)
Query: 64 SMSQRPSNLKEFTIAELK-SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
S S+R +N I + + K + IG G +G++ + D + VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGA-----QGIVCAAYDAILERNVAIKK 56
Query: 123 LGR----RGGHKEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVD 177
L R + K E+ + V H+N++ L+ + Q + + + + ++
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLS 116
Query: 178 QY----LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA 233
Q L + + L + M G+ +LH II RD K SNI++
Sbjct: 117 QVIQMELDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDATL 165
Query: 234 KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITG 292
K+ DFGLAR + G + + T V T Y APE + D+WS G + E+I G
Sbjct: 166 KILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 21/182 (11%)
Query: 135 EVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV-DQYLSPKSETILTWAMR 193
E+ L ++H+N+V L D E LV + + G + D+ L + T
Sbjct: 56 EIAVLKKIKHENIVTL----EDIYESTTHYYLVMQLVSGGELFDRILE---RGVYTEKDA 108
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNIL-LDEQWNAKL--SDFGLARLGPSEGFT 250
+ Q + YLHE I+ RD K N+L L + N+K+ +DFGL+++ E
Sbjct: 109 SLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNG 162
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQW 310
+STA GT GY APE + + D WS GV Y L+ G P +E KL +
Sbjct: 163 IMSTAC-GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF---YEETESKLFEK 218
Query: 311 VK 312
+K
Sbjct: 219 IK 220
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 47/227 (20%)
Query: 85 KNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KEWMTEVNFLG 140
K + +G G +G V + K S + +VA+K+L R K E+ L
Sbjct: 42 KTYVSPTHVGSGAYGSVCSAIDKRSGE-----KVAIKKLSRPFQSEIFAKRAYRELLLLK 96
Query: 141 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV----DQYL-SPKSETILTWAMRLK 195
++H+N++ L+ + P S+ D YL P +T L M ++
Sbjct: 97 HMQHENVIGLLDV----------------FTPASSLRNFYDFYLVMPFMQTDLQKIMGME 140
Query: 196 IAQD--------AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSE 247
+++ +GL Y+H ++ RD K N+ ++E K+ DFGLAR +E
Sbjct: 141 FSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAE 197
Query: 248 GFTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + + ++ D+WS G + E++TG+
Sbjct: 198 -----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 101/239 (42%), Gaps = 29/239 (12%)
Query: 64 SMSQRPSNLKEFTIAELK-SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
S S+R +N I + + K + IG G +G++ + D + VA+K+
Sbjct: 3 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGA-----QGIVCAAYDAILERNVAIKK 57
Query: 123 LGR----RGGHKEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVD 177
L R + K E+ + V H+N++ L+ + Q + + + + ++
Sbjct: 58 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 117
Query: 178 QY----LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA 233
Q L + + L + M G+ +LH II RD K SNI++
Sbjct: 118 QVIQMELDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTL 166
Query: 234 KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITG 292
K+ DFGLAR + G + + T V T Y APE + D+WS G + E+I G
Sbjct: 167 KILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 28/234 (11%)
Query: 91 VVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRR----GGHKEWMTEVNFLGIVEHQN 146
+ IG G F VYKGL D VEVA +L R + + E L ++H N
Sbjct: 32 IEIGRGSFKTVYKGL-----DTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPN 86
Query: 147 LVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLS----PKSETILTWAMRLKIAQDAAR 202
+V+ + +LV E +G++ YL K + + +W ++ +
Sbjct: 87 IVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LK 140
Query: 203 GLAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
GL +LH II RD K NI + + K+ D GLA L + + AV+GT
Sbjct: 141 GLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA----SFAKAVIGTPE 195
Query: 262 YAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPID--RNRPRSEQKLLQWVKP 313
+ APE + + DV+++G E T P +N + +++ VKP
Sbjct: 196 FXAPEXYEE-KYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKP 248
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 114/286 (39%), Gaps = 51/286 (17%)
Query: 81 KSATKNFSRSVVIGEGGF------------GCVYKGLIKNSEDPSQKVEVAVKQLGR--- 125
KS N SV +G+ F G +G++ + D VA+K+L R
Sbjct: 41 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 100
Query: 126 -RGGHKEWMTEVNFLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQY 179
+ K E+ + V H+N++ L+ E LV E M +
Sbjct: 101 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 160
Query: 180 LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 239
L + + L + M G+ +LH II RD K SNI++ K+ DFG
Sbjct: 161 LDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 209
Query: 240 LARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI------TGR 293
LAR + G + + T V T Y APE + D+WS G + E++ GR
Sbjct: 210 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266
Query: 294 RPIDR-NR---------PRSEQKLLQWVKPYLSDAKQFRQIVDPRL 329
ID+ N+ P +KL V+ Y+ + ++ + P+L
Sbjct: 267 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 312
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 101/239 (42%), Gaps = 29/239 (12%)
Query: 64 SMSQRPSNLKEFTIAELK-SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
S S+R +N I + + K + IG G +G++ + D + VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGA-----QGIVCAAYDAILERNVAIKK 56
Query: 123 LGR----RGGHKEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVD 177
L R + K E+ + V H+N++ L+ + Q + + + + ++
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 116
Query: 178 QY----LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA 233
Q L + + L + M G+ +LH II RD K SNI++
Sbjct: 117 QVIQMELDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTL 165
Query: 234 KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITG 292
K+ DFGLAR + G + + T V T Y APE + D+WS G + E+I G
Sbjct: 166 KILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 96/224 (42%), Gaps = 25/224 (11%)
Query: 76 TIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KE 131
TI E+ +N S +G G +G V D VAVK+L R K
Sbjct: 16 TIWEVPERYQNLSP---VGSGAYGSVCAAF-----DTKTGHRVAVKKLSRPFQSIIHAKR 67
Query: 132 WMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
E+ L ++H+N++ L+ + + + ++ ++ + K + +
Sbjct: 68 TYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQKLTDD 125
Query: 191 AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFT 250
++ I Q RGL Y+H II RD K SN+ ++E K+ DF LAR E
Sbjct: 126 HVQFLIYQ-ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE--- 178
Query: 251 HVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
T V T Y APE + ++ D+WS G + EL+TGR
Sbjct: 179 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 91/207 (43%), Gaps = 15/207 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEV-NFLGIVEHQNLVKLV 151
+G G F V + + K S E A K L +R ++ E+ + + ++E V
Sbjct: 37 LGRGKFAVVRQCISK-----STGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRV 91
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
+ E + +L+ EY G + P+ +++ +++ + G+ YLH+
Sbjct: 92 INLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN- 150
Query: 212 DFQIIVRDFKSSNILLDEQW---NAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 268
I+ D K NILL + + K+ DFG++R G ++GT Y APE +
Sbjct: 151 --NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR---KIGHACELREIMGTPEYLAPEIL 205
Query: 269 QTGRLAARSDVWSYGVFLYELITGRRP 295
+ +D+W+ G+ Y L+T P
Sbjct: 206 NYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 101/239 (42%), Gaps = 29/239 (12%)
Query: 64 SMSQRPSNLKEFTIAELK-SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
S S+R +N I + + K + IG G +G++ + D + VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGA-----QGIVCAAYDAILERNVAIKK 56
Query: 123 LGR----RGGHKEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVD 177
L R + K E+ + V H+N++ L+ + Q + + + + ++
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 116
Query: 178 QY----LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA 233
Q L + + L + M G+ +LH II RD K SNI++
Sbjct: 117 QVIQMELDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTL 165
Query: 234 KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITG 292
K+ DFGLAR + G + + T V T Y APE + D+WS G + E+I G
Sbjct: 166 KILDFGLAR---TAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 92/234 (39%), Gaps = 38/234 (16%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KEWMTEVNFLGI 141
N+ +IG G +G VY KN+ VA+K++ R K + E+ L
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANK-----NVAIKKVNRMFEDLIDCKRILREITILNR 83
Query: 142 VEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAA 201
++ +++L +D L + + + + + K+ LT I +
Sbjct: 84 LKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLF--KTPIFLTEQHVKTILYNLL 141
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS-------- 253
G ++HE II RD K +N LL++ + K+ DFGLAR S+ H+
Sbjct: 142 LGEKFIHES---GIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEE 198
Query: 254 ---------------TAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELIT 291
T+ V T Y APE + S D+WS G EL+
Sbjct: 199 NEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLN 252
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 94/215 (43%), Gaps = 29/215 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGGHKEWMT-EVNFLGIVEH 144
+G G F ++K + S +E A K + RRG +E + EV+ L V H
Sbjct: 20 LGSGQFA-----IVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 204
N++ L D E +L+ E + G + +L+ K L+ + G+
Sbjct: 75 HNVITL----HDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGV 128
Query: 205 AYLHEGMDFQIIVRDFKSSNI-LLDEQW---NAKLSDFGLARLGPSEGFTHVSTAVVGTM 260
YLH +I D K NI LLD+ + KL DFGLA +G + + GT
Sbjct: 129 NYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVEFKN--IFGTP 182
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 295
+ APE V L +D+WS GV Y L++G P
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 114/286 (39%), Gaps = 51/286 (17%)
Query: 81 KSATKNFSRSVVIGEGGF------------GCVYKGLIKNSEDPSQKVEVAVKQLGR--- 125
KS N SV +G+ F G +G++ + D VA+K+L R
Sbjct: 4 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 63
Query: 126 -RGGHKEWMTEVNFLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQY 179
+ K E+ + V H+N++ L+ E LV E M +
Sbjct: 64 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 123
Query: 180 LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 239
L + + L + M G+ +LH II RD K SNI++ K+ DFG
Sbjct: 124 LDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 172
Query: 240 LARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI------TGR 293
LAR + G + + T V T Y APE + D+WS G + E++ GR
Sbjct: 173 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 229
Query: 294 RPIDR-NR---------PRSEQKLLQWVKPYLSDAKQFRQIVDPRL 329
ID+ N+ P +KL V+ Y+ + ++ + P+L
Sbjct: 230 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 275
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 114/286 (39%), Gaps = 51/286 (17%)
Query: 81 KSATKNFSRSVVIGEGGF------------GCVYKGLIKNSEDPSQKVEVAVKQLGR--- 125
KS N SV +G+ F G +G++ + D VA+K+L R
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 126 -RGGHKEWMTEVNFLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQY 179
+ K E+ + V H+N++ L+ E LV E M +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 122
Query: 180 LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 239
L + + L + M G+ +LH II RD K SNI++ K+ DFG
Sbjct: 123 LDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 240 LARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI------TGR 293
LAR + G + + T V T Y APE + D+WS G + E++ GR
Sbjct: 172 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 294 RPIDR-NR---------PRSEQKLLQWVKPYLSDAKQFRQIVDPRL 329
ID+ N+ P +KL V+ Y+ + ++ + P+L
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 92/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+ G + +L A R A
Sbjct: 100 F------PFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT Y AP + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 114/286 (39%), Gaps = 51/286 (17%)
Query: 81 KSATKNFSRSVVIGEGGF------------GCVYKGLIKNSEDPSQKVEVAVKQLGR--- 125
KS N SV +G+ F G +G++ + D VA+K+L R
Sbjct: 2 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 61
Query: 126 -RGGHKEWMTEVNFLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQY 179
+ K E+ + V H+N++ L+ E LV E M +
Sbjct: 62 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 121
Query: 180 LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 239
L + + L + M G+ +LH II RD K SNI++ K+ DFG
Sbjct: 122 LDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 170
Query: 240 LARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI------TGR 293
LAR + G + + T V T Y APE + D+WS G + E++ GR
Sbjct: 171 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 227
Query: 294 RPIDR-NR---------PRSEQKLLQWVKPYLSDAKQFRQIVDPRL 329
ID+ N+ P +KL V+ Y+ + ++ + P+L
Sbjct: 228 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 273
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 114/286 (39%), Gaps = 51/286 (17%)
Query: 81 KSATKNFSRSVVIGEGGF------------GCVYKGLIKNSEDPSQKVEVAVKQLGR--- 125
KS N SV +G+ F G +G++ + D VA+K+L R
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 126 -RGGHKEWMTEVNFLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQY 179
+ K E+ + V H+N++ L+ E LV E M +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 122
Query: 180 LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 239
L + + L + M G+ +LH II RD K SNI++ K+ DFG
Sbjct: 123 LDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 171
Query: 240 LARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI------TGR 293
LAR + G + + T V T Y APE + D+WS G + E++ GR
Sbjct: 172 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 294 RPIDR-NR---------PRSEQKLLQWVKPYLSDAKQFRQIVDPRL 329
ID+ N+ P +KL V+ Y+ + ++ + P+L
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 114/286 (39%), Gaps = 51/286 (17%)
Query: 81 KSATKNFSRSVVIGEGGF------------GCVYKGLIKNSEDPSQKVEVAVKQLGR--- 125
KS N SV +G+ F G +G++ + D VA+K+L R
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 126 -RGGHKEWMTEVNFLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQY 179
+ K E+ + V H+N++ L+ E LV E M +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME 122
Query: 180 LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 239
L + + L + M G+ +LH II RD K SNI++ K+ DFG
Sbjct: 123 LDHERMSYLLYQM--------LXGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFG 171
Query: 240 LARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI------TGR 293
LAR + G + + T V T Y APE + D+WS G + E++ GR
Sbjct: 172 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 294 RPIDR-NR---------PRSEQKLLQWVKPYLSDAKQFRQIVDPRL 329
ID+ N+ P +KL V+ Y+ + ++ + P+L
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 94/215 (43%), Gaps = 29/215 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGGHKEWMT-EVNFLGIVEH 144
+G G F ++K + S +E A K + RRG +E + EV+ L V H
Sbjct: 20 LGSGQFA-----IVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 204
N++ L D E +L+ E + G + +L+ K L+ + G+
Sbjct: 75 HNVITL----HDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGV 128
Query: 205 AYLHEGMDFQIIVRDFKSSNI-LLDEQW---NAKLSDFGLARLGPSEGFTHVSTAVVGTM 260
YLH +I D K NI LLD+ + KL DFGLA +G + + GT
Sbjct: 129 NYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVEFKN--IFGTP 182
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 295
+ APE V L +D+WS GV Y L++G P
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 114/286 (39%), Gaps = 51/286 (17%)
Query: 81 KSATKNFSRSVVIGEGGF------------GCVYKGLIKNSEDPSQKVEVAVKQLGR--- 125
KS N SV +G+ F G +G++ + D VA+K+L R
Sbjct: 4 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 63
Query: 126 -RGGHKEWMTEVNFLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQY 179
+ K E+ + V H+N++ L+ E LV E M +
Sbjct: 64 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 123
Query: 180 LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 239
L + + L + M G+ +LH II RD K SNI++ K+ DFG
Sbjct: 124 LDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 172
Query: 240 LARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI------TGR 293
LAR + G + + T V T Y APE + D+WS G + E++ GR
Sbjct: 173 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 229
Query: 294 RPIDR-NR---------PRSEQKLLQWVKPYLSDAKQFRQIVDPRL 329
ID+ N+ P +KL V+ Y+ + ++ + P+L
Sbjct: 230 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 275
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 92/218 (42%), Gaps = 44/218 (20%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KEWMTEVNFLGIVEHQNLV 148
+G G +G V ++ D + +VAVK+L R + E+ L ++H+N++
Sbjct: 28 VGSGAYGSVC-----SAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVI 82
Query: 149 KLVGY------CADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAAR 202
L+ D E + L+ + N Q LS + L + + R
Sbjct: 83 GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQL--------LR 134
Query: 203 GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGY 262
GL Y+H II RD K SN+ ++E ++ DFGLAR E T V T Y
Sbjct: 135 GLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQADEE-----MTGYVATRWY 186
Query: 263 AAPE-------YVQTGRLAARSDVWSYGVFLYELITGR 293
APE Y QT D+WS G + EL+ G+
Sbjct: 187 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLQGK 218
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 92/218 (42%), Gaps = 44/218 (20%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KEWMTEVNFLGIVEHQNLV 148
+G G +G V ++ D + +VAVK+L R + E+ L ++H+N++
Sbjct: 36 VGSGAYGSVC-----SAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVI 90
Query: 149 KLVGY------CADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAAR 202
L+ D E + L+ + N Q LS + L + + R
Sbjct: 91 GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQL--------LR 142
Query: 203 GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGY 262
GL Y+H II RD K SN+ ++E ++ DFGLAR E T V T Y
Sbjct: 143 GLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEE-----MTGYVATRWY 194
Query: 263 AAPE-------YVQTGRLAARSDVWSYGVFLYELITGR 293
APE Y QT D+WS G + EL+ G+
Sbjct: 195 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLQGK 226
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 94/215 (43%), Gaps = 29/215 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVK-------QLGRRGGHKEWMT-EVNFLGIVEH 144
+G G F ++K + S +E A K + RRG +E + EV+ L V H
Sbjct: 20 LGSGQFA-----IVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLH 74
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 204
N++ L D E +L+ E + G + +L+ K L+ + G+
Sbjct: 75 PNIITL----HDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGV 128
Query: 205 AYLHEGMDFQIIVRDFKSSNI-LLDEQW---NAKLSDFGLARLGPSEGFTHVSTAVVGTM 260
YLH +I D K NI LLD+ + KL DFGLA +G + + GT
Sbjct: 129 NYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVEFKN--IFGTP 182
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 295
+ APE V L +D+WS GV Y L++G P
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 93/215 (43%), Gaps = 29/215 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGGHKEWMT-EVNFLGIVEH 144
+G G F V K + S +E A K + RRG +E + EV+ L V H
Sbjct: 20 LGSGQFAIV-----KKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 204
N++ L D E +L+ E + G + +L+ K L+ + G+
Sbjct: 75 HNVITL----HDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGV 128
Query: 205 AYLHEGMDFQIIVRDFKSSNI-LLDEQW---NAKLSDFGLARLGPSEGFTHVSTAVVGTM 260
YLH +I D K NI LLD+ + KL DFGLA +G + + GT
Sbjct: 129 NYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVEFKN--IFGTP 182
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 295
+ APE V L +D+WS GV Y L++G P
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 114/286 (39%), Gaps = 51/286 (17%)
Query: 81 KSATKNFSRSVVIGEGGF------------GCVYKGLIKNSEDPSQKVEVAVKQLGR--- 125
KS N SV +G+ F G +G++ + D VA+K+L R
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 126 -RGGHKEWMTEVNFLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQY 179
+ K E+ + V H+N++ L+ E LV E M +
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME 122
Query: 180 LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 239
L + + L + M G+ +LH II RD K SNI++ K+ DFG
Sbjct: 123 LDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFG 171
Query: 240 LARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI------TGR 293
LAR + G + + T V T Y APE + D+WS G + E++ GR
Sbjct: 172 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 294 RPIDR-NR---------PRSEQKLLQWVKPYLSDAKQFRQIVDPRL 329
ID+ N+ P +KL V+ Y+ + ++ + P+L
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 90/220 (40%), Gaps = 28/220 (12%)
Query: 82 SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR----RGGHKEWMTEVN 137
+ K + + IG G +G++ + D + VAVK+L R + K E+
Sbjct: 19 TVLKRYQQLKPIGSGA-----QGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELV 73
Query: 138 FLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQYLSPKSETILTWAM 192
L V H+N++ L+ E LV E M + L + + L + M
Sbjct: 74 LLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQM 133
Query: 193 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
G+ +LH II RD K SNI++ K+ DFGLAR S F +
Sbjct: 134 LC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA-STNF--M 179
Query: 253 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITG 292
T V T Y APE + D+WS G + EL+ G
Sbjct: 180 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 114/286 (39%), Gaps = 51/286 (17%)
Query: 81 KSATKNFSRSVVIGEGGF------------GCVYKGLIKNSEDPSQKVEVAVKQLGR--- 125
KS N SV +G+ F G +G++ + D VA+K+L R
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 126 -RGGHKEWMTEVNFLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQY 179
+ K E+ + V H+N++ L+ E LV E M +
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME 122
Query: 180 LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 239
L + + L + M G+ +LH II RD K SNI++ K+ DFG
Sbjct: 123 LDHERMSYLLYQM--------LXGIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFG 171
Query: 240 LARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI------TGR 293
LAR + G + + T V T Y APE + D+WS G + E++ GR
Sbjct: 172 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 294 RPIDR-NR---------PRSEQKLLQWVKPYLSDAKQFRQIVDPRL 329
ID+ N+ P +KL V+ Y+ + ++ + P+L
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 93/215 (43%), Gaps = 29/215 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGGHKEWMT-EVNFLGIVEH 144
+G G F V K + S +E A K + RRG +E + EV+ L V H
Sbjct: 20 LGSGQFAIV-----KKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 204
N++ L D E +L+ E + G + +L+ K L+ + G+
Sbjct: 75 HNVITL----HDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGV 128
Query: 205 AYLHEGMDFQIIVRDFKSSNI-LLDEQW---NAKLSDFGLARLGPSEGFTHVSTAVVGTM 260
YLH +I D K NI LLD+ + KL DFGLA +G + + GT
Sbjct: 129 NYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVEFKN--IFGTP 182
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 295
+ APE V L +D+WS GV Y L++G P
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 112/282 (39%), Gaps = 51/282 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
++G GGFG VY G+ S + VA+K + + +W N + L+K V
Sbjct: 30 LLGSGGFGSVYSGI-----RVSDNLPVAIKHV-EKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 152 --GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG---- 203
G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 84 SSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 137
Query: 204 -LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 138 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRV 193
Query: 262 YAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQ 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 194 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF------------ 241
Query: 321 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
FRQ R+ S+ H+ CL RP E+
Sbjct: 242 FRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 271
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH---KEWMTEVNFLGIVEHQNLVK 149
+G G FG V+ L+ E+ S +E +K + + ++ E+ L ++H N++K
Sbjct: 30 LGSGAFGDVH--LV---EERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIK 84
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSV-DQYLSPKSE-TILTWAMRLKIAQDAARGLAYL 207
+ D I V E G + ++ +S ++ L+ ++ + LAY
Sbjct: 85 IFEVFEDYHNMYI----VMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 208 HEGMDFQIIVRDFKSSNILLDE---QWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAA 264
H ++ +D K NIL + K+ DFGLA L S+ ST GT Y A
Sbjct: 141 HSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALYMA 194
Query: 265 PEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
PE + + + D+WS GV +Y L+TG P
Sbjct: 195 PEVFKRD-VTFKCDIWSAGVVMYFLLTGCLPF 225
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 112/282 (39%), Gaps = 51/282 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
++G GGFG VY G+ S + VA+K + + +W N + L+K V
Sbjct: 31 LLGSGGFGSVYSGI-----RVSDNLPVAIKHV-EKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 152 --GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG---- 203
G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 85 SSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 138
Query: 204 -LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRV 194
Query: 262 YAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQ 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF------------ 242
Query: 321 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
FRQ R+ S+ H+ CL RP E+
Sbjct: 243 FRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 272
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 114/286 (39%), Gaps = 51/286 (17%)
Query: 81 KSATKNFSRSVVIGEGGF------------GCVYKGLIKNSEDPSQKVEVAVKQLGR--- 125
KS N SV +G+ F G +G++ + D VA+K+L R
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 126 -RGGHKEWMTEVNFLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQY 179
+ K E+ + V H+N++ L+ E LV E M +
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME 122
Query: 180 LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFG 239
L + + L + M G+ +LH II RD K SNI++ K+ DFG
Sbjct: 123 LDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFG 171
Query: 240 LARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI------TGR 293
LAR + G + + T V T Y APE + D+WS G + E++ GR
Sbjct: 172 LAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 228
Query: 294 RPIDR-NR---------PRSEQKLLQWVKPYLSDAKQFRQIVDPRL 329
ID+ N+ P +KL V+ Y+ + ++ + P+L
Sbjct: 229 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 112/282 (39%), Gaps = 51/282 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
++G GGFG VY G+ S + VA+K + + +W N + L+K V
Sbjct: 15 LLGSGGFGSVYSGI-----RVSDNLPVAIKHV-EKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 152 --GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG---- 203
G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 69 SSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 122
Query: 204 -LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 123 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRV 178
Query: 262 YAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQ 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 179 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF------------ 226
Query: 321 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
FRQ R+ S+ H+ CL RP E+
Sbjct: 227 FRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 256
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 93/215 (43%), Gaps = 29/215 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL-------GRRGGHKEWMT-EVNFLGIVEH 144
+G G F V K + S +E A K + RRG +E + EV+ L V H
Sbjct: 20 LGSGQFAIV-----KKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGL 204
N++ L D E +L+ E + G + +L+ K L+ + G+
Sbjct: 75 HNVITL----HDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSFIKQILDGV 128
Query: 205 AYLHEGMDFQIIVRDFKSSNI-LLDEQW---NAKLSDFGLARLGPSEGFTHVSTAVVGTM 260
YLH +I D K NI LLD+ + KL DFGLA +G + + GT
Sbjct: 129 NYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH-EIEDGVEFKN--IFGTP 182
Query: 261 GYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRP 295
+ APE V L +D+WS GV Y L++G P
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 74/176 (42%), Gaps = 37/176 (21%)
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLD--EQWNAKLSDFGLARLGPSEGFTHVSTA 255
Q G++Y H QI RD K N LLD K+ DFG ++ S +
Sbjct: 123 QQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKS 176
Query: 256 VVGTMGYAAPEYV----QTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPRSEQKLLQW 310
VGT Y APE + G++A DVWS GV LY ++ G P D PR +K +Q
Sbjct: 177 TVGTPAYIAPEVLLRQEYDGKIA---DVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQR 233
Query: 311 VKPYLSDAKQFRQIVDPRLEGKYS----LRLVSKLSHVANLCLVKNARTRPKMSEV 362
+ L KYS +R+ + H+ + V + TR + E+
Sbjct: 234 I-----------------LSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEI 272
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 107/262 (40%), Gaps = 44/262 (16%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR----RGGHKEWMTEVNFLGIVEHQNLV 148
IG G +G++ + D VA+K+L R + K E+ + V H+N++
Sbjct: 26 IGSGA-----QGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 80
Query: 149 KLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQYLSPKSETILTWAMRLKIAQDAARG 203
L+ E LV E M + L + + L + M G
Sbjct: 81 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC--------G 132
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYA 263
+ +LH II RD K SNI++ K+ DFGLAR + G + + T V T Y
Sbjct: 133 IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 186
Query: 264 APEYVQTGRLAARSDVWSYGVFLYELI------TGRRPIDR-NR---------PRSEQKL 307
APE + D+WS G + E++ GR ID+ N+ P +KL
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 246
Query: 308 LQWVKPYLSDAKQFRQIVDPRL 329
V+ Y+ + ++ + P+L
Sbjct: 247 QPTVRNYVENRPKYAGLTFPKL 268
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 112/282 (39%), Gaps = 51/282 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
++G GGFG VY G+ S + VA+K + + +W N + L+K V
Sbjct: 16 LLGSGGFGSVYSGI-----RVSDNLPVAIKHV-EKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 152 --GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG---- 203
G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 70 SSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 123
Query: 204 -LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRV 179
Query: 262 YAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQ 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF------------ 227
Query: 321 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
FRQ R+ S+ H+ CL RP E+
Sbjct: 228 FRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 112/282 (39%), Gaps = 51/282 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
++G GGFG VY G+ S + VA+K + + +W N + L+K V
Sbjct: 43 LLGSGGFGSVYSGI-----RVSDNLPVAIKHV-EKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 152 --GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG---- 203
G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 97 SSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 150
Query: 204 -LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRV 206
Query: 262 YAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQ 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF------------ 254
Query: 321 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
FRQ R+ S+ H+ CL RP E+
Sbjct: 255 FRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 112/282 (39%), Gaps = 51/282 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
++G GGFG VY G+ S + VA+K + + +W N + L+K V
Sbjct: 16 LLGSGGFGSVYSGI-----RVSDNLPVAIKHV-EKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 152 --GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARGLAY- 206
G+ G+ RLL + P+ V + P + R + ++ AR +
Sbjct: 70 SSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 123
Query: 207 ----LHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
+ + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRV 179
Query: 262 YAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQ 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF------------ 227
Query: 321 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
FRQ R+ S+ H+ CL RP E+
Sbjct: 228 FRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 112/282 (39%), Gaps = 51/282 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
++G GGFG VY G+ S + VA+K + + +W N + L+K V
Sbjct: 16 LLGSGGFGSVYSGI-----RVSDNLPVAIKHV-EKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 152 --GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARGLAY- 206
G+ G+ RLL + P+ V + P + R + ++ AR +
Sbjct: 70 SSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 123
Query: 207 ----LHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
+ + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRV 179
Query: 262 YAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQ 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF------------ 227
Query: 321 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
FRQ R+ S+ H+ CL RP E+
Sbjct: 228 FRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 257
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 112/282 (39%), Gaps = 51/282 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
++G GGFG VY G+ S + VA+K + + +W N + L+K V
Sbjct: 58 LLGSGGFGSVYSGI-----RVSDNLPVAIKHV-EKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 152 --GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG---- 203
G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 112 SSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 165
Query: 204 -LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRV 221
Query: 262 YAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQ 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF------------ 269
Query: 321 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
FRQ R+ S+ H+ CL RP E+
Sbjct: 270 FRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 299
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 112/282 (39%), Gaps = 51/282 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
++G GGFG VY G+ S + VA+K + + +W N + L+K V
Sbjct: 50 LLGSGGFGSVYSGI-----RVSDNLPVAIKHV-EKDRISDWGELPNGTRVPMEVVLLKKV 103
Query: 152 --GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG---- 203
G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 104 SSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 157
Query: 204 -LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 158 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRV 213
Query: 262 YAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQ 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 214 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF------------ 261
Query: 321 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
FRQ R+ S+ H+ CL RP E+
Sbjct: 262 FRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 291
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 110/273 (40%), Gaps = 44/273 (16%)
Query: 82 SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR----RGGHKEWMTEVN 137
+ K + IG G +G++ + D VA+K+L R + K E+
Sbjct: 14 TVLKRYQNLKPIGSGA-----QGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV 68
Query: 138 FLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQYLSPKSETILTWAM 192
+ V H+N++ L+ E LV E M + L + + L + M
Sbjct: 69 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 128
Query: 193 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
G+ +LH II RD K SNI++ K+ DFGLAR + G + +
Sbjct: 129 LC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFM 174
Query: 253 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI------TGRRPIDR-NR----- 300
T V T Y APE + D+WS G + E++ GR ID+ N+
Sbjct: 175 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 234
Query: 301 ----PRSEQKLLQWVKPYLSDAKQFRQIVDPRL 329
P +KL V+ Y+ + ++ + P+L
Sbjct: 235 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 267
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 110/273 (40%), Gaps = 44/273 (16%)
Query: 82 SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR----RGGHKEWMTEVN 137
+ K + IG G +G++ + D VA+K+L R + K E+
Sbjct: 15 TVLKRYQNLKPIGSGA-----QGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELV 69
Query: 138 FLGIVEHQNLVKLVGYCADDD--ERGIQRLLVYEYMPNG---SVDQYLSPKSETILTWAM 192
+ V H+N++ L+ E LV E M + L + + L + M
Sbjct: 70 LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQM 129
Query: 193 RLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHV 252
G+ +LH II RD K SNI++ K+ DFGLAR + G + +
Sbjct: 130 LC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFM 175
Query: 253 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI------TGRRPIDR-NR----- 300
T V T Y APE + D+WS G + E++ GR ID+ N+
Sbjct: 176 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 235
Query: 301 ----PRSEQKLLQWVKPYLSDAKQFRQIVDPRL 329
P +KL V+ Y+ + ++ + P+L
Sbjct: 236 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 268
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 92/224 (41%), Gaps = 32/224 (14%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPS---------QKVEVAVKQLGRRGGHKEWMTEVN 137
F R +G G FG V L+K+ E + QKV V +KQ+ K + VN
Sbjct: 43 FDRIKTLGTGSFGRVM--LVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVN 99
Query: 138 FLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIA 197
F LVKL D+ +V EY+ G + +L A R A
Sbjct: 100 F------PFLVKLEFSFKDNS----NLYMVMEYVAGGEMFSHLRRIGRFSEPHA-RFYAA 148
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVV 257
Q YLH +I RD K N+L+D+Q +++DFG A+ + +
Sbjct: 149 Q-IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----TWXLC 199
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
GT APE + + D W+ GV +YE+ G P ++P
Sbjct: 200 GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 112/282 (39%), Gaps = 51/282 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
++G GGFG VY G+ S + VA+K + + +W N + L+K V
Sbjct: 14 LLGSGGFGSVYSGI-----RVSDNLPVAIKHV-EKDRISDWGELPNGTRVPMEVVLLKKV 67
Query: 152 --GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARGLAY- 206
G+ G+ RLL + P+ V + P + R + ++ AR +
Sbjct: 68 SSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 121
Query: 207 ----LHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
+ + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 122 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRV 177
Query: 262 YAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQ 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 178 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF------------ 225
Query: 321 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
FRQ R+ S+ H+ CL RP E+
Sbjct: 226 FRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 255
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 100/239 (41%), Gaps = 29/239 (12%)
Query: 64 SMSQRPSNLKEFTIAELK-SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
S S+R +N I + + K + IG G +G++ + D + VA+K+
Sbjct: 4 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGA-----QGIVCAAYDAILERNVAIKK 58
Query: 123 LGR----RGGHKEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVD 177
L R + K E+ + V H+N++ L+ + Q + + + + ++
Sbjct: 59 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 118
Query: 178 QY----LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA 233
Q L + + L + M G+ +LH II RD K SNI++
Sbjct: 119 QVIQMELDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTL 167
Query: 234 KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITG 292
K+ DFGLAR + G + + V T Y APE + D+WS G + E+I G
Sbjct: 168 KILDFGLAR---TAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR---LGPSEGFTHVSTAVVG 258
RGL Y+H Q+I RD K SN+L++E K+ DFG+AR P+E + T V
Sbjct: 170 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAE-HQYFMTEYVA 225
Query: 259 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGRR 294
T Y APE + + ++ D+WS G E++ R+
Sbjct: 226 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 112/282 (39%), Gaps = 51/282 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
++G GGFG VY G+ S + VA+K + + +W N + L+K V
Sbjct: 44 LLGSGGFGSVYSGI-----RVSDNLPVAIKHV-EKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 152 --GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG---- 203
G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 98 SSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 151
Query: 204 -LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRV 207
Query: 262 YAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQ 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + + +
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------------EEIIGGQVF 255
Query: 321 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
FRQ R+ S+ H+ CL RP E+
Sbjct: 256 FRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 112/282 (39%), Gaps = 51/282 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
++G GGFG VY G+ S + VA+K + + +W N + L+K V
Sbjct: 43 LLGSGGFGSVYSGI-----RVSDNLPVAIKHV-EKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 152 --GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG---- 203
G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 97 SSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 150
Query: 204 -LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRV 206
Query: 262 YAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQ 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + + +
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------------EEIIGGQVF 254
Query: 321 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
FRQ R+ S+ H+ CL RP E+
Sbjct: 255 FRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 112/282 (39%), Gaps = 51/282 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
++G GGFG VY G+ S + VA+K + + +W N + L+K V
Sbjct: 44 LLGSGGFGSVYSGI-----RVSDNLPVAIKHV-EKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 152 --GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG---- 203
G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 98 SSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 151
Query: 204 -LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRV 207
Query: 262 YAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQ 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + + +
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------------EEIIGGQVF 255
Query: 321 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
FRQ R+ S+ H+ CL RP E+
Sbjct: 256 FRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 112/282 (39%), Gaps = 51/282 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
++G GGFG VY G+ S + VA+K + + +W N + L+K V
Sbjct: 43 LLGSGGFGSVYSGI-----RVSDNLPVAIKHV-EKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 152 --GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG---- 203
G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 97 SSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 150
Query: 204 -LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRV 206
Query: 262 YAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQ 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + + +
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------------EEIIGGQVF 254
Query: 321 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
FRQ R+ S+ H+ CL RP E+
Sbjct: 255 FRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 284
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR---LGPSEGFTHVSTAVVG 258
RGL Y+H Q+I RD K SN+L++E K+ DFG+AR P+E + T V
Sbjct: 169 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAE-HQYFMTEYVA 224
Query: 259 TMGYAAPEYVQTGRLAARS-DVWSYGVFLYELITGRR 294
T Y APE + + ++ D+WS G E++ R+
Sbjct: 225 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 92/218 (42%), Gaps = 44/218 (20%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KEWMTEVNFLGIVEHQNLV 148
+G G +G V ++ D + +VAVK+L R + E+ L ++H+N++
Sbjct: 36 VGSGAYGSVC-----SAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVI 90
Query: 149 KLVGY------CADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAAR 202
L+ D E + L+ + N Q LS + L + + R
Sbjct: 91 GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQL--------LR 142
Query: 203 GLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGY 262
GL Y+H II RD K SN+ ++E ++ DFGLAR E T V T Y
Sbjct: 143 GLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEE-----MTGYVATRWY 194
Query: 263 AAPE-------YVQTGRLAARSDVWSYGVFLYELITGR 293
APE Y QT D+WS G + EL+ G+
Sbjct: 195 RAPEIMLNWMHYNQT------VDIWSVGCIMAELLQGK 226
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 112/282 (39%), Gaps = 51/282 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
++G GGFG VY G+ S + VA+K + + +W N + L+K V
Sbjct: 11 LLGSGGFGSVYSGI-----RVSDNLPVAIKHV-EKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 152 --GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARGLAY- 206
G+ G+ RLL + P+ V + P + R + ++ AR +
Sbjct: 65 SSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 118
Query: 207 ----LHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
+ + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRV 174
Query: 262 YAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQ 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF------------ 222
Query: 321 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
FRQ R+ S+ H+ CL RP E+
Sbjct: 223 FRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 105/259 (40%), Gaps = 38/259 (14%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR----RGGHKEWMTEVNFLGIVEHQNLV 148
IG G +G++ + D VA+K+L R + K E+ + V H+N++
Sbjct: 25 IGSGA-----QGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 79
Query: 149 KLVGYCADDD--ERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAY 206
L+ E LV E M D L + L + G+ +
Sbjct: 80 SLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQMELDHERMSYLLYQMLXGIKH 134
Query: 207 LHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPE 266
LH II RD K SNI++ K+ DFGLAR + G + + T V T Y APE
Sbjct: 135 LHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYYRAPE 188
Query: 267 YVQTGRLAARSDVWSYGVFLYELI------TGRRPIDR-NR---------PRSEQKLLQW 310
+ D+WS G + E++ GR ID+ N+ P +KL
Sbjct: 189 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 248
Query: 311 VKPYLSDAKQFRQIVDPRL 329
V+ Y+ + ++ + P+L
Sbjct: 249 VRNYVENRPKYAGLTFPKL 267
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 20/243 (8%)
Query: 60 PSYPSMS--QRPSNLKEFTIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVE 117
P SM+ Q+ EF + + N+ +G+G F V + + K +
Sbjct: 2 PHMASMTGGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKI 61
Query: 118 VAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVD 177
+ K+L R K E ++H N+V+L D + LV++ + G +
Sbjct: 62 INTKKLSARDFQK-LEREARICRKLQHPNIVRL----HDSIQEESFHYLVFDLVTGGELF 116
Query: 178 QYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA---K 234
+ + + + A Q +AY H I+ R+ K N+LL + K
Sbjct: 117 EDIVARE--FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVK 171
Query: 235 LSDFGLA-RLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGR 293
L+DFGLA + SE + GT GY +PE ++ + D+W+ GV LY L+ G
Sbjct: 172 LADFGLAIEVNDSEAWH----GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY 227
Query: 294 RPI 296
P
Sbjct: 228 PPF 230
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 112/282 (39%), Gaps = 51/282 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
++G GGFG VY G+ S + VA+K + + +W N + L+K V
Sbjct: 11 LLGSGGFGSVYSGI-----RVSDNLPVAIKHV-EKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 152 --GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARGLAY- 206
G+ G+ RLL + P+ V + P + R + ++ AR +
Sbjct: 65 SSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 118
Query: 207 ----LHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
+ + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRV 174
Query: 262 YAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQ 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + + +
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------------EEIIGGQVF 222
Query: 321 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
FRQ R+ S+ H+ CL RP E+
Sbjct: 223 FRQ------------RVSSECQHLIRWCLALRPSDRPTFEEI 252
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 103/249 (41%), Gaps = 26/249 (10%)
Query: 71 NLKEFTIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK 130
NL +A T ++ +G+G F V + + K + K+L R H+
Sbjct: 17 NLYFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARD-HQ 75
Query: 131 EWMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTW 190
+ E +++H N+V+L + E G LV++ + G + E I+
Sbjct: 76 KLEREARICRLLKHPNIVRLHDSIS---EEGFH-YLVFDLVTGGEL-------FEDIV-- 122
Query: 191 AMRLKIAQDAARGLAYLHEGMDF----QIIVRDFKSSNILLDEQWNA---KLSDFGLARL 243
A DA+ + + E ++ I+ RD K N+LL + KL+DFGLA
Sbjct: 123 AREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAI- 181
Query: 244 GPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRS 303
+G GT GY +PE ++ D+W+ GV LY L+ G P
Sbjct: 182 -EVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPF---WDED 237
Query: 304 EQKLLQWVK 312
+ KL Q +K
Sbjct: 238 QHKLYQQIK 246
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 123/295 (41%), Gaps = 28/295 (9%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL--GRRGGHKEWMTEVNFLG-IVEHQNLV 148
V+ EGGF VY+ ++D E A+K+L ++ + EV F+ + H N+V
Sbjct: 35 VLAEGGFAFVYE-----AQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIV 89
Query: 149 KLVGYCA---DDDERGIQRLLVYEYMPNGSVDQYLSP-KSETILTWAMRLKIAQDAARGL 204
+ + ++ + G L+ + G + ++L +S L+ LKI R +
Sbjct: 90 QFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAV 149
Query: 205 AYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL---GPSEGFTHVSTAVV---- 257
++H II RD K N+LL Q KL DFG A P ++ A+V
Sbjct: 150 QHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEI 208
Query: 258 ---GTMGYAAPEYVQ---TGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV 311
T Y PE + + + D+W+ G LY L + P + +
Sbjct: 209 TRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYSI 268
Query: 312 KPYLSDAKQFRQIVDPRLEGKYSLRL-VSKLSH-VANLCLVKNARTRPKMSEVLE 364
P+ + F ++ L+ RL ++++ H + + +N + ++E+LE
Sbjct: 269 PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNPKSPITELLE 323
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 99/228 (43%), Gaps = 18/228 (7%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEV--AVKQLGRRGGHKEWMTEVNFLGIVEH 144
+ + IG+G FG V+K + + QKV + + + + G + E+ L +++H
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKT---GQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 145 QNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETIL---TWAMRLKIAQDAA 201
+N+V L+ C R Y+ + L+ +L T + ++ Q
Sbjct: 77 ENVVNLIEICRTK-ASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR---LGPSEGFTHVSTAVVG 258
GL Y+H +I+ RD K++N+L+ KL+DFGLAR L + VV
Sbjct: 136 NGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV- 191
Query: 259 TMGYAAPEYVQTGR-LAARSDVWSYGVFLYELITGRRPIDRNRPRSEQ 305
T+ Y PE + R D+W G + E+ T R PI + Q
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQ 238
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 102/240 (42%), Gaps = 56/240 (23%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK--EWMTEVNFLGIVE 143
+F V+G+G FG V K +N+ D A+K++ R K ++EV L +
Sbjct: 7 DFEEIAVLGQGAFGQVVKA--RNALDSRY---YAIKKI-RHTEEKLSTILSEVMLLASLN 60
Query: 144 HQNLVKLVGYCADDDERGIQR-----------LLVYEYMPNGSVDQYLSPKSETILT--- 189
HQ +V+ Y A + R + + EY N ++ Y SE +
Sbjct: 61 HQYVVRY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTL--YDLIHSENLNQQRD 116
Query: 190 --WAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR----- 242
W + +I + L+Y+H II RD K NI +DE N K+ DFGLA+
Sbjct: 117 EYWRLFRQILE----ALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 243 -----------LGPSEGFTHVSTAVVGTMGYAAPEYVQ-TGRLAARSDVWSYGVFLYELI 290
G S+ T+ +GT Y A E + TG + D++S G+ +E+I
Sbjct: 170 LDILKLDSQNLPGSSDNL----TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 105/251 (41%), Gaps = 35/251 (13%)
Query: 64 SMSQRPSNLKEFTIAELK-SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
S S+R +N I + + K + IG G +G++ + D + VA+K+
Sbjct: 7 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGA-----QGIVCAAYDAILERNVAIKK 61
Query: 123 LGR----RGGHKEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVD 177
L R + K E+ + V H+N++ L+ + Q + + + + ++
Sbjct: 62 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 121
Query: 178 QY----LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA 233
Q L + + L + M G+ +LH II RD K SNI++
Sbjct: 122 QVIQMELDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTL 170
Query: 234 KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-- 291
K+ DFGLAR + G + + T V T Y APE + D+WS G + E++
Sbjct: 171 KILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
Query: 292 ----GRRPIDR 298
GR ID+
Sbjct: 228 ILFPGRDYIDQ 238
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 26/235 (11%)
Query: 82 SATKNFSRSVVIGEGGFGCVYKGL-IKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLG 140
S T + +G+G F V + + I ++ + K+ + K+L R H++ E
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKI-INTKKLSARD-HQKLEREARICR 58
Query: 141 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
+++H N+V+L + E G LV++ + G + E I+ A DA
Sbjct: 59 LLKHPNIVRLHDSIS---EEGFH-YLVFDLVTGGEL-------FEDIV--AREYYSEADA 105
Query: 201 ARGLAYLHEGMDF----QIIVRDFKSSNILLDEQWNA---KLSDFGLARLGPSEGFTHVS 253
+ + + E ++ I+ RD K N+LL + KL+DFGLA +G
Sbjct: 106 SHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAI--EVQGDQQAW 163
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPRSEQKL 307
GT GY +PE ++ D+W+ GV LY L+ G P D ++ R Q++
Sbjct: 164 FGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQI 218
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 95/220 (43%), Gaps = 51/220 (23%)
Query: 93 IGEGGFGCVYKG-------------LIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFL 139
IGEG +G V+K +++ +DP +K++ R E+ L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDP------VIKKIALR--------EIRML 56
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRL-LVYEYMPN---GSVDQYLSPKSETILTWAMRLK 195
++H NLV L+ + R +RL LV+EY + +D+Y E ++
Sbjct: 57 KQLKHPNLVNLL-----EVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVK-----S 106
Query: 196 IAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARL--GPSEGFTHVS 253
I + + + H+ I RD K NIL+ + KL DFG ARL GPS+ +
Sbjct: 107 ITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY---- 159
Query: 254 TAVVGTMGYAAPE-YVQTGRLAARSDVWSYGVFLYELITG 292
V T Y +PE V + DVW+ G EL++G
Sbjct: 160 DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 111/282 (39%), Gaps = 51/282 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
++G GGFG VY G+ S + VA+K + + +W N + L+K V
Sbjct: 30 LLGSGGFGSVYSGI-----RVSDNLPVAIKHV-EKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 152 --GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG---- 203
G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 84 SSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 137
Query: 204 -LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 138 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRV 193
Query: 262 YAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQ 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 194 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF------------ 241
Query: 321 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
FRQ R+ + H+ CL RP E+
Sbjct: 242 FRQ------------RVSXECQHLIRWCLALRPSDRPTFEEI 271
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 111/282 (39%), Gaps = 51/282 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
++G GGFG VY G+ S + VA+K + + +W N + L+K V
Sbjct: 31 LLGSGGFGSVYSGI-----RVSDNLPVAIKHV-EKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 152 --GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG---- 203
G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 85 SSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 138
Query: 204 -LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRV 194
Query: 262 YAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQ 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF------------ 242
Query: 321 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
FRQ R+ + H+ CL RP E+
Sbjct: 243 FRQ------------RVSXECQHLIRWCLALRPXDRPTFEEI 272
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 105/235 (44%), Gaps = 26/235 (11%)
Query: 82 SATKNFSRSVVIGEGGFGCVYKGL-IKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLG 140
S T + +G+G F V + + I ++ + K+ + K+L R H++ E
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKI-INTKKLSARD-HQKLEREARICR 58
Query: 141 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
+++H N+V+L + E G LV++ + G + E I+ A DA
Sbjct: 59 LLKHPNIVRLHDSIS---EEGFH-YLVFDLVTGGEL-------FEDIV--AREYYSEADA 105
Query: 201 ARGLAYLHEGMDF----QIIVRDFKSSNILLDEQWNA---KLSDFGLARLGPSEGFTHVS 253
+ + + E ++ I+ RD K N+LL + KL+DFGLA +G
Sbjct: 106 SHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAI--EVQGDQQAW 163
Query: 254 TAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPRSEQKL 307
GT GY +PE ++ D+W+ GV LY L+ G P D ++ R Q++
Sbjct: 164 FGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQI 218
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 111/282 (39%), Gaps = 51/282 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
++G GGFG VY G+ S + VA+K + + +W N + L+K V
Sbjct: 31 LLGSGGFGSVYSGI-----RVSDNLPVAIKHV-EKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 152 --GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG---- 203
G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 85 SSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 138
Query: 204 -LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRV 194
Query: 262 YAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQ 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF------------ 242
Query: 321 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
FRQ R+ + H+ CL RP E+
Sbjct: 243 FRQ------------RVSXECQHLIRWCLALRPSDRPTFEEI 272
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 20/220 (9%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEV--AVKQLGRRGGHKEWMTEVNFLGIVEH 144
+ + IG+G FG V+K + + QKV + + + + G + E+ L +++H
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKT---GQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 145 QNLVKLVGYC---ADDDERGIQRL-LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
+N+V L+ C A R + LV+++ + L T + ++ Q
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG--LLSNVLVKFTLSEIKRVMQML 134
Query: 201 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR---LGPSEGFTHVSTAVV 257
GL Y+H +I+ RD K++N+L+ KL+DFGLAR L + VV
Sbjct: 135 LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 258 GTMGYAAPEYVQTGR-LAARSDVWSYGVFLYELITGRRPI 296
T+ Y PE + R D+W G + E+ T R PI
Sbjct: 192 -TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 100/220 (45%), Gaps = 18/220 (8%)
Query: 93 IGEGGFGCVYKGL-IKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
+G+G F V + + + ++ + K+ + K+L R H++ E +++H N+V+L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKI-INTKKLSARD-HQKLEREARICRLLKHPNIVRLH 87
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
+++ L+++ + G + + + + + A Q + + H+
Sbjct: 88 DSISEEG----HHYLIFDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQ-- 139
Query: 212 DFQIIVRDFKSSNILLDEQWNA---KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 268
++ RD K N+LL + KL+DFGLA EG GT GY +PE +
Sbjct: 140 -MGVVHRDLKPENLLLASKLKGAAVKLADFGLAI--EVEGEQQAWFGFAGTPGYLSPEVL 196
Query: 269 QTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPRSEQKL 307
+ D+W+ GV LY L+ G P D ++ R Q++
Sbjct: 197 RKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQI 236
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 20/220 (9%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEV--AVKQLGRRGGHKEWMTEVNFLGIVEH 144
+ + IG+G FG V+K + + QKV + + + + G + E+ L +++H
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKT---GQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 145 QNLVKLVGYC---ADDDERGIQRL-LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
+N+V L+ C A R + LV+++ + L T + ++ Q
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG--LLSNVLVKFTLSEIKRVMQML 133
Query: 201 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR---LGPSEGFTHVSTAVV 257
GL Y+H +I+ RD K++N+L+ KL+DFGLAR L + VV
Sbjct: 134 LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 190
Query: 258 GTMGYAAPEYVQTGR-LAARSDVWSYGVFLYELITGRRPI 296
T+ Y PE + R D+W G + E+ T R PI
Sbjct: 191 -TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 228
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 111/282 (39%), Gaps = 51/282 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
++G GGFG VY G+ S + VA+K + + +W N + L+K V
Sbjct: 58 LLGSGGFGSVYSGI-----RVSDNLPVAIKHV-EKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 152 --GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG---- 203
G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 112 SSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 165
Query: 204 -LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRV 221
Query: 262 YAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQ 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF------------ 269
Query: 321 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
FRQ R+ + H+ CL RP E+
Sbjct: 270 FRQ------------RVSXECQHLIRWCLALRPSDRPTFEEI 299
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 111/282 (39%), Gaps = 51/282 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
++G GGFG VY G+ S + VA+K + + +W N + L+K V
Sbjct: 44 LLGSGGFGSVYSGI-----RVSDNLPVAIKHV-EKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 152 --GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG---- 203
G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 98 SSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 151
Query: 204 -LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRV 207
Query: 262 YAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQ 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + + +
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------------EEIIGGQVF 255
Query: 321 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
FRQ R+ + H+ CL RP E+
Sbjct: 256 FRQ------------RVSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 20/229 (8%)
Query: 87 FSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEV--AVKQLGRRGGHKEWMTEVNFLGIVEH 144
+ + IG+G FG V+K + + QKV + + + + G + E+ L +++H
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKT---GQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 145 QNLVKLVGYC---ADDDERGIQRL-LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
+N+V L+ C A R + LV+++ + L T + ++ Q
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG--LLSNVLVKFTLSEIKRVMQML 134
Query: 201 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR---LGPSEGFTHVSTAVV 257
GL Y+H +I+ RD K++N+L+ KL+DFGLAR L + VV
Sbjct: 135 LNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 258 GTMGYAAPEYVQTGR-LAARSDVWSYGVFLYELITGRRPIDRNRPRSEQ 305
T+ Y PE + R D+W G + E+ T R PI + Q
Sbjct: 192 -TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQ 238
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 111/282 (39%), Gaps = 51/282 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
++G GGFG VY G+ S + VA+K + + +W N + L+K V
Sbjct: 43 LLGSGGFGSVYSGI-----RVSDNLPVAIKHV-EKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 152 --GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG---- 203
G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 97 SSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 150
Query: 204 -LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRV 206
Query: 262 YAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQ 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + + +
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------------EEIIGGQVF 254
Query: 321 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
FRQ R+ + H+ CL RP E+
Sbjct: 255 FRQ------------RVSXECQHLIRWCLALRPSDRPTFEEI 284
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 111/282 (39%), Gaps = 51/282 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
++G GGFG VY G+ S + VA+K + + +W N + L+K V
Sbjct: 44 LLGSGGFGSVYSGI-----RVSDNLPVAIKHV-EKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 152 --GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG---- 203
G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 98 SSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 151
Query: 204 -LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRV 207
Query: 262 YAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQ 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + + +
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------------EEIIGGQVF 255
Query: 321 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
FRQ R+ + H+ CL RP E+
Sbjct: 256 FRQ------------RVSXECQHLIRWCLALRPSDRPTFEEI 285
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 111/282 (39%), Gaps = 51/282 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
++G GGFG VY G+ S + VA+K + + +W N + L+K V
Sbjct: 63 LLGSGGFGSVYSGI-----RVSDNLPVAIKHV-EKDRISDWGELPNGTRVPMEVVLLKKV 116
Query: 152 --GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARG---- 203
G+ G+ RLL + P+ V + P + R + ++ AR
Sbjct: 117 SSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 170
Query: 204 -LAYLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
L + + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 171 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRV 226
Query: 262 YAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQ 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 227 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF------------ 274
Query: 321 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
FRQ R+ + H+ CL RP E+
Sbjct: 275 FRQ------------RVSXECQHLIRWCLALRPSDRPTFEEI 304
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 101/235 (42%), Gaps = 20/235 (8%)
Query: 82 SATKNFSRSVVIGEGGFGCVYKGL-IKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLG 140
S T + IG+G F V + + + + + K+ + K+L R H++ E
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKI-INTKKLSARD-HQKLEREARICR 58
Query: 141 IVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDA 200
+++H N+V+L + E G LV++ + G + + + + + A Q
Sbjct: 59 LLKHSNIVRLHDSIS---EEGFH-YLVFDLVTGGELFEDIVARE--YYSEADASHCIQQI 112
Query: 201 ARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA---KLSDFGLARLGPSEGFTHVSTAVV 257
+ + H+ ++ RD K N+LL + KL+DFGLA +G
Sbjct: 113 LEAVLHCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAI--EVQGDQQAWFGFA 167
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVK 312
GT GY +PE ++ D+W+ GV LY L+ G P + KL Q +K
Sbjct: 168 GTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPF---WDEDQHKLYQQIK 219
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 111/282 (39%), Gaps = 51/282 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
++G GGFG VY G+ S + VA+K + + +W N + L+K V
Sbjct: 11 LLGSGGFGSVYSGI-----RVSDNLPVAIKHV-EKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 152 --GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARGLAY- 206
G+ G+ RLL + P+ V + P + R + ++ AR +
Sbjct: 65 SSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 118
Query: 207 ----LHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
+ + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 119 VLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRV 174
Query: 262 YAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQ 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF------------ 222
Query: 321 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
FRQ R+ + H+ CL RP E+
Sbjct: 223 FRQ------------RVSXECQHLIRWCLALRPSDRPTFEEI 252
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 111/282 (39%), Gaps = 51/282 (18%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLV 151
++G GGFG VY G+ S + VA+K + + +W N + L+K V
Sbjct: 38 LLGSGGFGSVYSGI-----RVSDNLPVAIKHV-EKDRISDWGELPNGTRVPMEVVLLKKV 91
Query: 152 --GYCADDDERGIQRLLVYEYMPNGSVD--QYLSPKSETILTWAMRLKIAQDAARGLAY- 206
G+ G+ RLL + P+ V + P + R + ++ AR +
Sbjct: 92 SSGFS------GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 145
Query: 207 ----LHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMG 261
+ + ++ RD K NIL+D + KL DFG L +T GT
Sbjct: 146 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRV 201
Query: 262 YAAPEYVQTGRLAARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQ 320
Y+ PE+++ R RS VWS G+ LY+++ G P + + ++
Sbjct: 202 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF------------ 249
Query: 321 FRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
FRQ R+ + H+ CL RP E+
Sbjct: 250 FRQ------------RVSXECQHLIRWCLALRPSDRPTFEEI 279
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 18/217 (8%)
Query: 84 TKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVE 143
+ N+ +G+G F V + + K + + K+L R K E ++
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-LEREARICRKLQ 63
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARG 203
H N+V+L D + LV++ + G + + + + + A Q
Sbjct: 64 HPNIVRL----HDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILES 117
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNA---KLSDFGLA-RLGPSEGFTHVSTAVVGT 259
+AY H I+ R+ K N+LL + KL+DFGLA + SE + GT
Sbjct: 118 IAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH----GFAGT 170
Query: 260 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
GY +PE ++ + D+W+ GV LY L+ G P
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 18/217 (8%)
Query: 84 TKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVE 143
+ N+ +G+G F V + + K + + K+L R K E ++
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-LEREARICRKLQ 62
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARG 203
H N+V+L D + LV++ + G + + + + + A Q
Sbjct: 63 HPNIVRL----HDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILES 116
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNA---KLSDFGLA-RLGPSEGFTHVSTAVVGT 259
+AY H I+ R+ K N+LL + KL+DFGLA + SE + GT
Sbjct: 117 IAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH----GFAGT 169
Query: 260 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI 296
GY +PE ++ + D+W+ GV LY L+ G P
Sbjct: 170 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 93/233 (39%), Gaps = 42/233 (18%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQ 145
+F +G GGFG V++ KN D ++ R ++ M EV L +EH
Sbjct: 6 DFEPIQCLGRGGFGVVFEA--KNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHP 63
Query: 146 NLVKLVGYCADDDERGIQRLL-----VYEYMPNGSVDQYLSPKSETILTW---------- 190
+V+ + A ++ ++L VY Y+ Q + E + W
Sbjct: 64 GIVRY--FNAWLEKNTTEKLQPSSPKVYLYI------QMQLCRKENLKDWMNGRCTIEER 115
Query: 191 --AMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR------ 242
++ L I A + +LH ++ RD K SNI K+ DFGL
Sbjct: 116 ERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE 172
Query: 243 -----LGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELI 290
L P + T VGT Y +PE + + + D++S G+ L+EL+
Sbjct: 173 EEQTVLTPMPAYAR-HTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 19/224 (8%)
Query: 84 TKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVE 143
+ N+ +G+G F V + + K + + K+L R K E ++
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-LEREARICRKLQ 63
Query: 144 HQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARG 203
H N+V+L D + LV++ + G + + + + + A Q
Sbjct: 64 HPNIVRL----HDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILES 117
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNA---KLSDFGLA-RLGPSEGFTHVSTAVVGT 259
+AY H I+ R+ K N+LL + KL+DFGLA + SE + GT
Sbjct: 118 IAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH----GFAGT 170
Query: 260 MGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPI-DRNRPR 302
GY +PE ++ + D+W+ GV LY L+ G P D ++ R
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR 214
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 34/221 (15%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGR----RGGHKEWMTEVNFLGIVEHQNLV 148
IG G +G++ + D + VA+K+L R + K E+ + V H+N++
Sbjct: 26 IGSGA-----QGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 80
Query: 149 KLVG-YCADDDERGIQRLLVYEYMPNGSVDQY----LSPKSETILTWAMRLKIAQDAARG 203
L+ + Q + + + + ++ Q L + + L + M G
Sbjct: 81 GLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC--------G 132
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYA 263
+ +LH II RD K SNI++ K+ DFGLAR + G + + T V T Y
Sbjct: 133 IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYYR 186
Query: 264 APEYVQTGRLAARSDVWSYGVFLYELIT------GRRPIDR 298
APE + D+WS G + E++ GR ID+
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ 227
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 26/212 (12%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWM--TEVNFLGIVEHQNLVKL 150
IG+G +G V+ G + +KV V V W TE+ ++ H+N++
Sbjct: 45 IGKGRYGEVWMGKWRG-----EKVAVKVFFTTEEAS---WFRETEIYQTVLMRHENILGF 96
Query: 151 VGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH-E 209
+ Q L+ +Y NGS+ YL KS T+ +M LK+A + GL +LH E
Sbjct: 97 IAADIKGTGSWTQLYLITDYHENGSLYDYL--KSTTLDAKSM-LKLAYSSVSGLCHLHTE 153
Query: 210 GMDFQ----IIVRDFKSSNILLDEQWNAKLSDFGLAR--LGPSEGFTHVSTAVVGTMGYA 263
Q I RD KS NIL+ + ++D GLA + + VGT Y
Sbjct: 154 IFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYM 213
Query: 264 APEYVQTG------RLAARSDVWSYGVFLYEL 289
PE + + +D++S+G+ L+E+
Sbjct: 214 PPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 31/179 (17%)
Query: 134 TEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV------DQYLSPKSETI 187
TE+ L + H ++K+ + +D +V E M G + ++ L + +
Sbjct: 63 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGNKRLKEATCKL 117
Query: 188 LTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILL---DEQWNAKLSDFGLARLG 244
+ M L + YLHE II RD K N+LL +E K++DFG +++
Sbjct: 118 YFYQMLLAVQ--------YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 166
Query: 245 PSEGFTHVSTAVVGTMGYAAPEY---VQTGRLAARSDVWSYGVFLYELITGRRPIDRNR 300
G T + + GT Y APE V T D WS GV L+ ++G P +R
Sbjct: 167 ---GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 222
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 96/219 (43%), Gaps = 16/219 (7%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLVG 152
+G+G F V + + + + + K+L R H++ E +++H N+V+L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARD-HQKLEREARICRLLKHPNIVRLHD 77
Query: 153 YCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMD 212
+++ L+++ + G + + + + + A Q + + H+
Sbjct: 78 SISEEG----HHYLIFDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQ--- 128
Query: 213 FQIIVRDFKSSNILLDEQWNA---KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQ 269
++ R+ K N+LL + KL+DFGLA EG GT GY +PE ++
Sbjct: 129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLAI--EVEGEQQAWFGFAGTPGYLSPEVLR 186
Query: 270 TGRLAARSDVWSYGVFLYELITGRRPI-DRNRPRSEQKL 307
D+W+ GV LY L+ G P D ++ R Q++
Sbjct: 187 KDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQI 225
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 31/179 (17%)
Query: 134 TEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV------DQYLSPKSETI 187
TE+ L + H ++K+ + +D +V E M G + ++ L + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGNKRLKEATCKL 118
Query: 188 LTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILL---DEQWNAKLSDFGLARLG 244
+ M L + YLHE II RD K N+LL +E K++DFG +++
Sbjct: 119 YFYQMLLAVQ--------YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
Query: 245 PSEGFTHVSTAVVGTMGYAAPEY---VQTGRLAARSDVWSYGVFLYELITGRRPIDRNR 300
G T + + GT Y APE V T D WS GV L+ ++G P +R
Sbjct: 168 ---GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 31/179 (17%)
Query: 134 TEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV------DQYLSPKSETI 187
TE+ L + H ++K+ + +D +V E M G + ++ L + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGNKRLKEATCKL 118
Query: 188 LTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILL---DEQWNAKLSDFGLARLG 244
+ M L + YLHE II RD K N+LL +E K++DFG +++
Sbjct: 119 YFYQMLLAVQ--------YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
Query: 245 PSEGFTHVSTAVVGTMGYAAPEY---VQTGRLAARSDVWSYGVFLYELITGRRPIDRNR 300
G T + + GT Y APE V T D WS GV L+ ++G P +R
Sbjct: 168 ---GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 31/179 (17%)
Query: 134 TEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV------DQYLSPKSETI 187
TE+ L + H ++K+ + +D +V E M G + ++ L + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGNKRLKEATCKL 118
Query: 188 LTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILL---DEQWNAKLSDFGLARLG 244
+ M L + YLHE II RD K N+LL +E K++DFG +++
Sbjct: 119 YFYQMLLAVQ--------YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
Query: 245 PSEGFTHVSTAVVGTMGYAAPEY---VQTGRLAARSDVWSYGVFLYELITGRRPIDRNR 300
G T + + GT Y APE V T D WS GV L+ ++G P +R
Sbjct: 168 ---GETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 223
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 31/179 (17%)
Query: 134 TEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV------DQYLSPKSETI 187
TE+ L + H ++K+ + +D +V E M G + ++ L + +
Sbjct: 70 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGNKRLKEATCKL 124
Query: 188 LTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILL---DEQWNAKLSDFGLARLG 244
+ M L + YLHE II RD K N+LL +E K++DFG +++
Sbjct: 125 YFYQMLLAVQ--------YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI- 172
Query: 245 PSEGFTHVSTAVVGTMGYAAPEY---VQTGRLAARSDVWSYGVFLYELITGRRPIDRNR 300
G T + + GT Y APE V T D WS GV L+ ++G P +R
Sbjct: 173 --LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 229
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 104/251 (41%), Gaps = 35/251 (13%)
Query: 64 SMSQRPSNLKEFTIAELK-SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
S S+R +N I + + K + IG G +G++ + D + VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGA-----QGIVCAAYDAILERNVAIKK 56
Query: 123 LGR----RGGHKEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVD 177
L R + K E+ + V H+N++ L+ + Q + + + + ++
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 116
Query: 178 QY----LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA 233
Q L + + L + M G+ +LH II RD K SNI++
Sbjct: 117 QVIQMELDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTL 165
Query: 234 KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-- 291
K+ DFGLAR + G + + V T Y APE + D+WS G + E++
Sbjct: 166 KILDFGLAR---TAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
Query: 292 ----GRRPIDR 298
GR ID+
Sbjct: 223 ILFPGRDYIDQ 233
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 62/150 (41%), Gaps = 30/150 (20%)
Query: 215 IIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRL 273
++ RD K NIL+D + KL DFG L +T GT Y+ PE+++ R
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD----GTRVYSPPEWIRYHRY 233
Query: 274 AARSD-VWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRLEGK 332
RS VWS G+ LY+++ G P + + ++ FRQ
Sbjct: 234 HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVF------------FRQ--------- 272
Query: 333 YSLRLVSKLSHVANLCLVKNARTRPKMSEV 362
R+ S+ H+ CL RP E+
Sbjct: 273 ---RVSSECQHLIRWCLALRPSDRPTFEEI 299
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 30/151 (19%)
Query: 215 IIVRDFKSSNILLD-EQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRL 273
++ RD K NIL+D + AKL DFG L E +T GT Y+ PE++ +
Sbjct: 160 VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFD----GTRVYSPPEWISRHQY 215
Query: 274 -AARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSDAKQFRQIVDPRLEGK 332
A + VWS G+ LY+++ G P +R++ E +L F V P
Sbjct: 216 HALPATVWSLGILLYDMVCGDIPFERDQEILEAEL------------HFPAHVSP----- 258
Query: 333 YSLRLVSKLSHVANLCLVKNARTRPKMSEVL 363
+ CL +RP + E+L
Sbjct: 259 -------DCCALIRRCLAPKPSSRPSLEEIL 282
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 31/179 (17%)
Query: 134 TEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV------DQYLSPKSETI 187
TE+ L + H ++K+ + +D +V E M G + ++ L + +
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGNKRLKEATCKL 243
Query: 188 LTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILL---DEQWNAKLSDFGLARLG 244
+ M L + YLHE II RD K N+LL +E K++DFG +++
Sbjct: 244 YFYQMLLAVQ--------YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI- 291
Query: 245 PSEGFTHVSTAVVGTMGYAAPEY---VQTGRLAARSDVWSYGVFLYELITGRRPIDRNR 300
G T + + GT Y APE V T D WS GV L+ ++G P +R
Sbjct: 292 --LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR 348
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 104/251 (41%), Gaps = 35/251 (13%)
Query: 64 SMSQRPSNLKEFTIAELK-SATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQ 122
S S+R +N I + + K + IG G +G++ + D + VA+K+
Sbjct: 2 SRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGA-----QGIVCAAYDAILERNVAIKK 56
Query: 123 LGR----RGGHKEWMTEVNFLGIVEHQNLVKLVG-YCADDDERGIQRLLVYEYMPNGSVD 177
L R + K E+ + V H+N++ L+ + Q + + + + ++
Sbjct: 57 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 116
Query: 178 QY----LSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNA 233
Q L + + L + M G+ +LH II RD K SNI++
Sbjct: 117 QVIQMELDHERMSYLLYQMLC--------GIKHLHSA---GIIHRDLKPSNIVVKSDCTL 165
Query: 234 KLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT-- 291
K+ DFGLAR + G + + V T Y APE + D+WS G + E++
Sbjct: 166 KILDFGLAR---TAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
Query: 292 ----GRRPIDR 298
GR ID+
Sbjct: 223 ILFPGRDYIDQ 233
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 79/185 (42%), Gaps = 31/185 (16%)
Query: 134 TEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV------DQYLSPKSETI 187
TE+ L + H ++K+ + +D +V E M G + ++ L + +
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAED-----YYIVLELMEGGELFDKVVGNKRLKEATCKL 257
Query: 188 LTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILL---DEQWNAKLSDFGLARLG 244
+ M L + YLHE II RD K N+LL +E K++DFG +++
Sbjct: 258 YFYQMLLAVQ--------YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI- 305
Query: 245 PSEGFTHVSTAVVGTMGYAAPEY---VQTGRLAARSDVWSYGVFLYELITGRRPIDRNRP 301
G T + + GT Y APE V T D WS GV L+ ++G P +R
Sbjct: 306 --LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 363
Query: 302 RSEQK 306
+ K
Sbjct: 364 QVSLK 368
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 100/240 (41%), Gaps = 56/240 (23%)
Query: 86 NFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHK--EWMTEVNFLGIVE 143
+F V+G+G FG V K +N+ D A+K++ R K ++EV L +
Sbjct: 7 DFEEIAVLGQGAFGQVVKA--RNALDSRY---YAIKKI-RHTEEKLSTILSEVXLLASLN 60
Query: 144 HQNLVKLVGYCADDDERGIQR-----------LLVYEYMPNGSVDQYLSPKSETILT--- 189
HQ +V+ Y A + R + + EY N ++ Y SE +
Sbjct: 61 HQYVVRY--YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTL--YDLIHSENLNQQRD 116
Query: 190 --WAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR----- 242
W + +I + L+Y+H II R+ K NI +DE N K+ DFGLA+
Sbjct: 117 EYWRLFRQILE----ALSYIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 243 -----------LGPSEGFTHVSTAVVGTMGYAAPEYVQ-TGRLAARSDVWSYGVFLYELI 290
G S+ T+ +GT Y A E + TG + D +S G+ +E I
Sbjct: 170 LDILKLDSQNLPGSSDNL----TSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 24/212 (11%)
Query: 98 FGCVYKGLIKNSEDPSQKVEVAVKQ--LGRRGGHKEWMTEVNFLGIVEHQNLVKLV---- 151
GC GL+ ++ D VA+K+ L K + E+ + ++H N+VK+
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 152 --GYCADDDERGIQRL----LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLA 205
G DD + L +V EYM + + +L RL + Q RGL
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVL---EQGPLLEEHARLFMYQ-LLRGLK 134
Query: 206 YLHEGMDFQIIVRDFKSSNILLD-EQWNAKLSDFGLAR-LGPSEGFT-HVSTAVVGTMGY 262
Y+H ++ RD K +N+ ++ E K+ DFGLAR + P H+S +V T Y
Sbjct: 135 YIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV-TKWY 190
Query: 263 AAPEYVQTGRLAARS-DVWSYGVFLYELITGR 293
+P + + ++ D+W+ G E++TG+
Sbjct: 191 RSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 218 RDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARS 277
RD K NIL+ A L DFG+A E T + VGT+ Y APE R+
Sbjct: 158 RDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGN-TVGTLYYXAPERFSESHATYRA 216
Query: 278 DVWSYGVFLYELITGRRP 295
D+++ LYE +TG P
Sbjct: 217 DIYALTCVLYECLTGSPP 234
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 33/178 (18%)
Query: 209 EGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYA 263
+GM+F + I RD + NILL E+ K+ DFGLAR + + A + + +
Sbjct: 204 KGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-PLKWM 262
Query: 264 APEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQWVKPYLSD 317
APE + +SDVWS+GV L+E+ + G P ID R ++ + P +
Sbjct: 263 APETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTT 322
Query: 318 AKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDASAE 375
+ ++ ++D C RP SE++E + ++ A+A+
Sbjct: 323 PEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLLQANAQ 359
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 11/139 (7%)
Query: 165 LLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSN 224
L+V E + G + + + + T +I + + YLH I RD K N
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 147
Query: 225 ILL-DEQWNA--KLSDFGLARLGPSEGFTHVS-TAVVGTMGYAAPEYVQTGRLAARSDVW 280
+L ++ NA KL+DFG A+ E +H S T T Y APE + + D+W
Sbjct: 148 LLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 203
Query: 281 SYGVFLYELITGRRPIDRN 299
S GV +Y L+ G P N
Sbjct: 204 SLGVIMYILLCGYPPFYSN 222
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 33/178 (18%)
Query: 209 EGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYA 263
+GM+F + I RD + NILL E+ K+ DFGLAR + + A + + +
Sbjct: 211 KGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-PLKWM 269
Query: 264 APEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQWVKPYLSD 317
APE + +SDVWS+GV L+E+ + G P ID R ++ + P +
Sbjct: 270 APETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTT 329
Query: 318 AKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDASAE 375
+ ++ ++D C RP SE++E + ++ A+A+
Sbjct: 330 PEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLLQANAQ 366
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 165 LLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSN 224
L+V E + G + + + + T +I + + YLH I RD K N
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 197
Query: 225 ILL-DEQWNA--KLSDFGLARLGPSEGFTHVS-TAVVGTMGYAAPEYVQTGRLAARSDVW 280
+L ++ NA KL+DFG A+ E +H S T T Y APE + + D+W
Sbjct: 198 LLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 253
Query: 281 SYGVFLYELITGRRPIDRNR 300
S GV +Y L+ G P N
Sbjct: 254 SLGVIMYILLCGYPPFYSNH 273
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 33/178 (18%)
Query: 209 EGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYA 263
+GM+F + I RD + NILL E+ K+ DFGLAR + + A + + +
Sbjct: 209 KGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-PLKWM 267
Query: 264 APEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQWVKPYLSD 317
APE + +SDVWS+GV L+E+ + G P ID R ++ + P +
Sbjct: 268 APETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTT 327
Query: 318 AKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDASAE 375
+ ++ ++D C RP SE++E + ++ A+A+
Sbjct: 328 PEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLLQANAQ 364
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 165 LLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSN 224
L+V E + G + + + + T +I + + YLH I RD K N
Sbjct: 97 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 153
Query: 225 ILL-DEQWNA--KLSDFGLARLGPSEGFTHVS-TAVVGTMGYAAPEYVQTGRLAARSDVW 280
+L ++ NA KL+DFG A+ E +H S T T Y APE + + D+W
Sbjct: 154 LLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 209
Query: 281 SYGVFLYELITGRRPIDRNR 300
S GV +Y L+ G P N
Sbjct: 210 SLGVIMYILLCGYPPFYSNH 229
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 11/139 (7%)
Query: 165 LLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSN 224
L+V E + G + + + + T +I + + YLH I RD K N
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 191
Query: 225 ILL-DEQWNA--KLSDFGLARLGPSEGFTHVS-TAVVGTMGYAAPEYVQTGRLAARSDVW 280
+L ++ NA KL+DFG A+ E +H S T T Y APE + + D+W
Sbjct: 192 LLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 247
Query: 281 SYGVFLYELITGRRPIDRN 299
S GV +Y L+ G P N
Sbjct: 248 SLGVIMYILLCGYPPFYSN 266
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 18/226 (7%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGG--HKEWMTEVNFLGIVEHQNLVK 149
VIG+G F V + + + + V V + G ++ E + +++H ++V+
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSET--ILTWAMRLKIAQDAARGLAYL 207
L+ + D +V+E+M + + +++ + + A+ + L Y
Sbjct: 93 LLETYSSDG----MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 148
Query: 208 HEGMDFQIIVRDFKSSNILLDEQWNA---KLSDFGLA-RLGPSEGFTHVSTAVVGTMGYA 263
H D II RD K +LL + N+ KL FG+A +LG S V+ VGT +
Sbjct: 149 H---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES---GLVAGGRVGTPHFM 202
Query: 264 APEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQ 309
APE V+ DVW GV L+ L++G P + R + +++
Sbjct: 203 APEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIK 248
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 165 LLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSN 224
L+V E + G + + + + T +I + + YLH I RD K N
Sbjct: 96 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 152
Query: 225 ILL-DEQWNA--KLSDFGLARLGPSEGFTHVS-TAVVGTMGYAAPEYVQTGRLAARSDVW 280
+L ++ NA KL+DFG A+ E +H S T T Y APE + + D+W
Sbjct: 153 LLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 208
Query: 281 SYGVFLYELITGRRPIDRNR 300
S GV +Y L+ G P N
Sbjct: 209 SLGVIMYILLCGYPPFYSNH 228
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 165 LLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSN 224
L+V E + G + + + + T +I + + YLH I RD K N
Sbjct: 95 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 151
Query: 225 ILL-DEQWNA--KLSDFGLARLGPSEGFTHVS-TAVVGTMGYAAPEYVQTGRLAARSDVW 280
+L ++ NA KL+DFG A+ E +H S T T Y APE + + D+W
Sbjct: 152 LLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 207
Query: 281 SYGVFLYELITGRRPIDRNR 300
S GV +Y L+ G P N
Sbjct: 208 SLGVIMYILLCGYPPFYSNH 227
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 165 LLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSN 224
L+V E + G + + + + T +I + + YLH I RD K N
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 145
Query: 225 ILL-DEQWNA--KLSDFGLARLGPSEGFTHVS-TAVVGTMGYAAPEYVQTGRLAARSDVW 280
+L ++ NA KL+DFG A+ E +H S T T Y APE + + D+W
Sbjct: 146 LLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 201
Query: 281 SYGVFLYELITGRRPIDRNR 300
S GV +Y L+ G P N
Sbjct: 202 SLGVIMYILLCGYPPFYSNH 221
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 109/244 (44%), Gaps = 42/244 (17%)
Query: 64 SMSQRPSNLKEFTIAELKSATKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQL 123
+ +Q P ++ + A ++ + R +GEG +G VYK + D VA+K++
Sbjct: 14 AQTQGPGSMS-VSAAPSATSIDRYRRITKLGEGTYGEVYKAI-----DTVTNETVAIKRI 67
Query: 124 GRRGGHKE------WMTEVNFLGIVEHQNLVKLVGYCADDDERGIQRL-LVYEYMPNGSV 176
R H+E + EV+ L ++H+N+++L + RL L++EY N +
Sbjct: 68 --RLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHN-----HRLHLIFEYAEN-DL 119
Query: 177 DQYLSPKSETILTWAMRL--KIAQDAARGLAYLHEGMDFQIIVRDFKSSNILL-----DE 229
+Y+ + +MR+ G+ + H + + RD K N+LL E
Sbjct: 120 KKYMDKNPDV----SMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASE 172
Query: 230 QWNAKLSDFGLAR-LG-PSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFL 286
K+ DFGLAR G P FTH + T+ Y PE + R + S D+WS
Sbjct: 173 TPVLKIGDFGLARAFGIPIRQFTH----EIITLWYRPPEILLGSRHYSTSVDIWSIACIW 228
Query: 287 YELI 290
E++
Sbjct: 229 AEML 232
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 165 LLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSN 224
L+V E + G + + + + T +I + + YLH I RD K N
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 161
Query: 225 ILL-DEQWNA--KLSDFGLARLGPSEGFTHVS-TAVVGTMGYAAPEYVQTGRLAARSDVW 280
+L ++ NA KL+DFG A+ E +H S T T Y APE + + D+W
Sbjct: 162 LLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 217
Query: 281 SYGVFLYELITGRRPIDRNR 300
S GV +Y L+ G P N
Sbjct: 218 SLGVIMYILLCGYPPFYSNH 237
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 200 AARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVG 258
ARG+ +L + I RD + NILL E K+ DFGLAR + + + +
Sbjct: 208 VARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL- 263
Query: 259 TMGYAAPEYVQTGRLAARSDVWSYGVFLYELIT 291
+ + APE + + +SDVWSYGV L+E+ +
Sbjct: 264 PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 165 LLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSN 224
L+V E + G + + + + T +I + + YLH I RD K N
Sbjct: 90 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 146
Query: 225 ILL-DEQWNA--KLSDFGLARLGPSEGFTHVS-TAVVGTMGYAAPEYVQTGRLAARSDVW 280
+L ++ NA KL+DFG A+ E +H S T T Y APE + + D+W
Sbjct: 147 LLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 202
Query: 281 SYGVFLYELITGRRPIDRNR 300
S GV +Y L+ G P N
Sbjct: 203 SLGVIMYILLCGYPPFYSNH 222
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 18/226 (7%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGG--HKEWMTEVNFLGIVEHQNLVK 149
VIG+G F V + + + + V V + G ++ E + +++H ++V+
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSET--ILTWAMRLKIAQDAARGLAYL 207
L+ + D +V+E+M + + +++ + + A+ + L Y
Sbjct: 91 LLETYSSDG----MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 208 HEGMDFQIIVRDFKSSNILLDEQWNA---KLSDFGLA-RLGPSEGFTHVSTAVVGTMGYA 263
H D II RD K +LL + N+ KL FG+A +LG S V+ VGT +
Sbjct: 147 H---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES---GLVAGGRVGTPHFM 200
Query: 264 APEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQ 309
APE V+ DVW GV L+ L++G P + R + +++
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIK 246
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 165 LLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSN 224
L+V E + G + + + + T +I + + YLH I RD K N
Sbjct: 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 147
Query: 225 ILL-DEQWNA--KLSDFGLARLGPSEGFTHVS-TAVVGTMGYAAPEYVQTGRLAARSDVW 280
+L ++ NA KL+DFG A+ E +H S T T Y APE + + D+W
Sbjct: 148 LLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMW 203
Query: 281 SYGVFLYELITGRRPIDRNR 300
S GV +Y L+ G P N
Sbjct: 204 SLGVIMYILLCGYPPFYSNH 223
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 33/177 (18%)
Query: 209 EGMDF----QIIVRDFKSSNILLDEQWNAKLSDFGLAR-LGPSEGFTHVSTAVVGTMGYA 263
+GM+F + I RD + NILL E+ K+ DFGLAR + + A + + +
Sbjct: 202 KGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-PLKWM 260
Query: 264 APEYVQTGRLAARSDVWSYGVFLYELIT-GRRP-----IDRNRPRSEQKLLQWVKPYLSD 317
APE + +SDVWS+GV L+E+ + G P ID R ++ + P +
Sbjct: 261 APETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTT 320
Query: 318 AKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLEMVNKIVDASA 374
+ ++ ++D C RP SE++E + ++ A+A
Sbjct: 321 PEMYQTMLD---------------------CWHGEPSQRPTFSELVEHLGNLLQANA 356
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 165 LLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSN 224
L+V E + G + + + + T +I + + YLH I RD K N
Sbjct: 89 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 145
Query: 225 ILL-DEQWNA--KLSDFGLARLGPSEGFTHVS-TAVVGTMGYAAPEYVQTGRLAARSDVW 280
+L ++ NA KL+DFG A+ E +H S T T Y APE + + D+W
Sbjct: 146 LLYTSKRPNAILKLTDFGFAK----ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMW 201
Query: 281 SYGVFLYELITGRRPIDRNR 300
S GV +Y L+ G P N
Sbjct: 202 SLGVIMYILLCGYPPFYSNH 221
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 202 RGLAYLHEGMDFQIIVRDFKSSNIL-LDEQWNA---KLSDFGLARLGPSEGFTHVSTAVV 257
+ + YLH ++ RD K SNIL +DE N ++ DFG A+ +E ++
Sbjct: 127 KTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY- 182
Query: 258 GTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLL 308
T + APE ++ A D+WS GV LY ++TG P + +++L
Sbjct: 183 -TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEIL 232
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 98/236 (41%), Gaps = 23/236 (9%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVKLVG 152
+G G +G VYK K+ + A+KQ+ G E+ L ++H N++ L
Sbjct: 29 VGRGTYGHVYKAKRKDG---KDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQK 85
Query: 153 YCADDDERGIQRLLVYEYMPNGSVDQYL----SPKSETILTWAMRLKIAQDAARGLAYLH 208
+R + L Y + ++ + K L M + G+ YLH
Sbjct: 86 VFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH 145
Query: 209 EGMDFQIIVRDFKSSNILL----DEQWNAKLSDFGLARL--GPSEGFTHVSTAVVGTMGY 262
++ RD K +NIL+ E+ K++D G ARL P + + VV T Y
Sbjct: 146 ANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVV-TFWY 201
Query: 263 AAPEYVQTGRLAARS-DVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVKPYLSD 317
APE + R ++ D+W+ G EL+T PI R Q+ ++ PY D
Sbjct: 202 RAPELLLGARHYTKAIDIWAIGCIFAELLTS-EPIFHCR----QEDIKTSNPYHHD 252
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 53/236 (22%)
Query: 93 IGEGGFG----CVYKG---------LIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFL 139
IG G + CV+K + K+ DPS+++E+ L R G
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI----LLRYG------------ 78
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV-DQYLSPK--SETILTWAMRLKI 196
+H N++ L D + G LV E M G + D+ L K SE ++ +
Sbjct: 79 ---QHPNIITL----KDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVL---- 127
Query: 197 AQDAARGLAYLHEGMDFQIIVRDFKSSNIL-LDEQWNA---KLSDFGLARLGPSEGFTHV 252
+ + YLH ++ RD K SNIL +DE N ++ DFG A+ +E +
Sbjct: 128 -HTIGKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLM 183
Query: 253 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLL 308
+ T + APE ++ D+WS G+ LY ++ G P + +++L
Sbjct: 184 TPCY--TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEIL 237
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 53/236 (22%)
Query: 93 IGEGGFG----CVYKG---------LIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEVNFL 139
IG G + CV+K + K+ DPS+++E+ L R G
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI----LLRYG------------ 78
Query: 140 GIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV-DQYLSPK--SETILTWAMRLKI 196
+H N++ L D + G LV E M G + D+ L K SE ++ +
Sbjct: 79 ---QHPNIITL----KDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVL---- 127
Query: 197 AQDAARGLAYLHEGMDFQIIVRDFKSSNIL-LDEQWNA---KLSDFGLARLGPSEGFTHV 252
+ + YLH ++ RD K SNIL +DE N ++ DFG A+ +E +
Sbjct: 128 -HTIGKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLM 183
Query: 253 STAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLL 308
+ T + APE ++ D+WS G+ LY ++ G P + +++L
Sbjct: 184 TPCY--TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEIL 237
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 99/244 (40%), Gaps = 33/244 (13%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMTEV---NFLGIVEHQNLVK 149
I GG G +Y L +N V +K L G + + FL V H ++V+
Sbjct: 88 IAHGGLGWIYLALDRNV----NGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQ 143
Query: 150 LVGYCADDDERGIQ-RLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLH 208
+ + D G +V EY+ S+ + K A L+I L+YLH
Sbjct: 144 IFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILP----ALSYLH 199
Query: 209 EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYV 268
++ D K NI+L E+ KL D G S G+ + GT G+ APE V
Sbjct: 200 S---IGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSFGYLY------GTPGFQAPEIV 249
Query: 269 QTGRLAARSDVWSYGVFLYELITGRRPIDRNR-----PRSEQKLLQWVKPYLSDAKQFRQ 323
+TG A +D+++ G L L T P R P + L K Y S + R+
Sbjct: 250 RTGPTVA-TDIYTVGRTLAAL-TLDLPTRNGRYVDGLPEDDPVL----KTYDSYGRLLRR 303
Query: 324 IVDP 327
+DP
Sbjct: 304 AIDP 307
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLD--EQWNAKLSDFGLARLGPSEGFTHVSTA 255
Q G++Y H Q+ RD K N LLD K+ DFG ++ S +
Sbjct: 122 QQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKS 175
Query: 256 VVGTMGYAAPEYVQTGRLAAR-SDVWSYGVFLYELITGRRPI-DRNRPRSEQKLLQWV 311
VGT Y APE + + +DVWS GV LY ++ G P D P++ +K + +
Sbjct: 176 TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI 233
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 21/184 (11%)
Query: 133 MTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV-DQYLSPKSETILTWA 191
+ EV L ++H N++KL + +D+R LV E G + D+ + + + + A
Sbjct: 52 LDEVAVLKQLDHPNIMKLYEFF--EDKRNY--YLVMEVYRGGELFDEIILRQKFSEVDAA 107
Query: 192 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGLARLGPSEG 248
+ I + G YLH+ I+ RD K N+LL+ + K+ DFGL+ G
Sbjct: 108 V---IMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG 161
Query: 249 FTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLL 308
+GT Y APE ++ + + DVWS GV LY L+ G P +++Q++L
Sbjct: 162 ---KMKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFG---GQTDQEIL 214
Query: 309 QWVK 312
+ V+
Sbjct: 215 KRVE 218
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 125/278 (44%), Gaps = 39/278 (14%)
Query: 93 IGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKEWMT-EVNFLGIVEHQNLVKLV 151
+G G FG V++ + E S+K +A K + +G + + E++ L I H+N++ L
Sbjct: 13 LGRGEFGIVHRCV----ETSSKKTYMA-KFVKVKGTDQVLVKKEISILNIARHRNILHL- 66
Query: 152 GYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGM 211
+ E + ++++E++ + + ++ S L + L +LH
Sbjct: 67 ---HESFESMEELVMIFEFISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLH--- 119
Query: 212 DFQIIVRDFKSSNILLDEQWNA--KLSDFGLAR-LGPSEGFTHVSTAVVGTMGYAAPEYV 268
I D + NI+ + ++ K+ +FG AR L P + F + TA Y APE
Sbjct: 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAP----EYYAPEVH 175
Query: 269 QTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWV--KPYLSDAKQFRQIVD 326
Q ++ +D+WS G +Y L++G P + Q++++ + Y D + F++I
Sbjct: 176 QHDVVSTATDMWSLGTLVYVLLSGINPF---LAETNQQIIENIMNAEYTFDEEAFKEI-- 230
Query: 327 PRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVLE 364
++ V +L LVK ++R SE L+
Sbjct: 231 ----SIEAMDFVDRL-------LVKERKSRMTASEALQ 257
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLD--EQWNAKLSDFGLARLGPSEGFTHVSTA 255
Q G++Y H Q+ RD K N LLD K+ DFG ++ S +
Sbjct: 121 QQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKS 174
Query: 256 VVGTMGYAAPEYVQTGRLAAR-SDVWSYGVFLYELITGRRPI-DRNRPRSEQKLLQWV 311
VGT Y APE + + +DVWS GV LY ++ G P D P++ +K + +
Sbjct: 175 TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI 232
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 21/184 (11%)
Query: 133 MTEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSV-DQYLSPKSETILTWA 191
+ EV L ++H N++KL + +D+R LV E G + D+ + + + + A
Sbjct: 69 LDEVAVLKQLDHPNIMKLYEFF--EDKRNY--YLVMEVYRGGELFDEIILRQKFSEVDAA 124
Query: 192 MRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWN---AKLSDFGLARLGPSEG 248
+ I + G YLH+ I+ RD K N+LL+ + K+ DFGL+ G
Sbjct: 125 V---IMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG 178
Query: 249 FTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLL 308
+GT Y APE ++ + + DVWS GV LY L+ G P +++Q++L
Sbjct: 179 KM---KERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFG---GQTDQEIL 231
Query: 309 QWVK 312
+ V+
Sbjct: 232 KRVE 235
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 63/144 (43%), Gaps = 18/144 (12%)
Query: 166 LVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSNI 225
LV+E M GS+ ++ + A + QD A L +LH + I RD K NI
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEAS--VVVQDVASALDFLH---NKGIAHRDLKPENI 142
Query: 226 LLDEQWNA---KLSDFGLARLGPSEG-FTHVST----AVVGTMGYAAPEYVQTGRLAA-- 275
L + K+ DFGL G + +ST G+ Y APE V+ A
Sbjct: 143 LCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASI 202
Query: 276 ---RSDVWSYGVFLYELITGRRPI 296
R D+WS GV LY L++G P
Sbjct: 203 YDKRCDLWSLGVILYILLSGYPPF 226
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 90/230 (39%), Gaps = 40/230 (17%)
Query: 92 VIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGH----KEWMTEVNFLGIVEHQNL 147
+IG G +G V + D +K VA+K++ R K + E+ L + H ++
Sbjct: 60 LIGTGSYGHVCEAY-----DKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHV 114
Query: 148 VKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYL 207
VK++ D L V + + + ++ LT + + G+ Y+
Sbjct: 115 VKVLDIVIPKDVEKFDELYVVLEIADSDFKKLF--RTPVYLTELHIKTLLYNLLVGVKYV 172
Query: 208 HEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLAR-------------LGPSEG------ 248
H I+ RD K +N L+++ + K+ DFGLAR + P E
Sbjct: 173 HSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVT 229
Query: 249 FTHVS------TAVVGTMGYAAPEYVQTGRLAARS-DVWSYGVFLYELIT 291
F H T V T Y APE + + DVWS G EL+
Sbjct: 230 FPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 60/139 (43%), Gaps = 11/139 (7%)
Query: 165 LLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSN 224
L+V E + G + + + + T +I + + YLH I RD K N
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLH---SINIAHRDVKPEN 191
Query: 225 ILL-DEQWNA--KLSDFGLARLGPSEGFTHVS-TAVVGTMGYAAPEYVQTGRLAARSDVW 280
+L ++ NA KL+DFG A+ E +H S T T Y APE + + D W
Sbjct: 192 LLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXW 247
Query: 281 SYGVFLYELITGRRPIDRN 299
S GV Y L+ G P N
Sbjct: 248 SLGVIXYILLCGYPPFYSN 266
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 27/171 (15%)
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYA 263
L +H I+ D K +N L+ + KL DFG+A + + V + VGT+ Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 264 APEYVQ-----------TGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVK 312
PE ++ +++ +SDVWS G LY + G+ P Q+++ +
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--------QQIINQI- 274
Query: 313 PYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 363
+ I+DP E ++ L V CL ++ + R + E+L
Sbjct: 275 ------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 27/171 (15%)
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYA 263
L +H I+ D K +N L+ + KL DFG+A + + V + VGT+ Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 264 APEYVQ-----------TGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVK 312
PE ++ +++ +SDVWS G LY + G+ P Q+++ +
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--------QQIINQI- 274
Query: 313 PYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 363
+ I+DP E ++ L V CL ++ + R + E+L
Sbjct: 275 ------SKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 10/138 (7%)
Query: 165 LLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSN 224
L++ E M G + + + + T +I +D + +LH I RD K N
Sbjct: 83 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPEN 139
Query: 225 ILL---DEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWS 281
+L ++ KL+DFG A+ E + T Y APE + + D+WS
Sbjct: 140 LLYTSKEKDAVLKLTDFGFAK----ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWS 195
Query: 282 YGVFLYELITGRRPIDRN 299
GV +Y L+ G P N
Sbjct: 196 LGVIMYILLCGFPPFYSN 213
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 91/225 (40%), Gaps = 34/225 (15%)
Query: 93 IGEGGFGCVYKGLIKNSEDP---SQKVEVAVKQLGRRGGHKEWMTEVNFLGIVEHQNLVK 149
+GEGGF Y L++ D + K + +Q R +E E + + H N+++
Sbjct: 37 LGEGGFS--YVDLVEGLHDGHFYALKRILCHEQQDR----EEAQREADMHRLFNHPNILR 90
Query: 150 LVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSE--TILTWAMRLKIAQDAARGLAYL 207
LV YC + + L+ + G++ + + LT L + RGL +
Sbjct: 91 LVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI 150
Query: 208 H-EGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS-----------TA 255
H +G RD K +NILL ++ L D G ++ HV A
Sbjct: 151 HAKGYAH----RDLKPTNILLGDEGQPVLMDLG----SMNQACIHVEGSRQALTLQDWAA 202
Query: 256 VVGTMGYAAPEYVQTGR---LAARSDVWSYGVFLYELITGRRPID 297
T+ Y APE + R+DVWS G LY ++ G P D
Sbjct: 203 QRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 10/138 (7%)
Query: 165 LLVYEYMPNGSVDQYLSPKSETILTWAMRLKIAQDAARGLAYLHEGMDFQIIVRDFKSSN 224
L++ E M G + + + + T +I +D + +LH I RD K N
Sbjct: 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPEN 158
Query: 225 ILL---DEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYAAPEYVQTGRLAARSDVWS 281
+L ++ KL+DFG A+ E + T Y APE + + D+WS
Sbjct: 159 LLYTSKEKDAVLKLTDFGFAK----ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWS 214
Query: 282 YGVFLYELITGRRPIDRN 299
GV +Y L+ G P N
Sbjct: 215 LGVIMYILLCGFPPFYSN 232
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 27/171 (15%)
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYA 263
L +H I+ D K +N L+ + KL DFG+A + + V + VGT+ Y
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 179
Query: 264 APEYVQ-----------TGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVK 312
PE ++ +++ +SDVWS G LY + G+ P +
Sbjct: 180 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ-------------- 225
Query: 313 PYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 363
++ + I+DP E ++ L V CL ++ + R + E+L
Sbjct: 226 -IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 275
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 27/171 (15%)
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYA 263
L +H I+ D K +N L+ + KL DFG+A + + V + VGT+ Y
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 176
Query: 264 APEYVQ-----------TGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVK 312
PE ++ +++ +SDVWS G LY + G+ P +
Sbjct: 177 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ-------------- 222
Query: 313 PYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 363
++ + I+DP E ++ L V CL ++ + R + E+L
Sbjct: 223 -IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 272
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Query: 198 QDAARGLAYLHEGMDFQIIVRDFKSSNILLD--EQWNAKLSDFGLARLGPSEGFTHVSTA 255
Q G++Y H Q+ RD K N LLD K++DFG ++ + +
Sbjct: 122 QQLISGVSYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSK---ASVLHSQPKS 175
Query: 256 VVGTMGYAAPEYVQTGRLAAR-SDVWSYGVFLYELITGRRPI-DRNRPRSEQKLLQWV 311
VGT Y APE + + +DVWS GV LY ++ G P D P++ +K + +
Sbjct: 176 AVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI 233
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 92/224 (41%), Gaps = 27/224 (12%)
Query: 84 TKNFSRSVVIGEGGFGCVYKGLIKNSEDPSQKVEVAVKQLGRRGGHKE-WM--------- 133
++ +S +G G FG V+ + D + EV VK + + ++ W+
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAV-----DKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVT 77
Query: 134 TEVNFLGIVEHQNLVKLVGYCADDDERGIQRLLVYEYMPNGSVDQYLSPKSETILTWAMR 193
E+ L VEH N++K++ + +G +L++ ++ +D + L +
Sbjct: 78 LEIAILSRVEHANIIKVLDIF---ENQGFFQLVMEKH--GSGLDLFAFIDRHPRLDEPLA 132
Query: 194 LKIAQDAARGLAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVS 253
I + + YL II RD K NI++ E + KL DFG A +
Sbjct: 133 SYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFY-- 187
Query: 254 TAVVGTMGYAAPEYVQTGRL-AARSDVWSYGVFLYELITGRRPI 296
GT+ Y APE + ++WS GV LY L+ P
Sbjct: 188 -TFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 27/171 (15%)
Query: 204 LAYLHEGMDFQIIVRDFKSSNILLDEQWNAKLSDFGLARLGPSEGFTHVSTAVVGTMGYA 263
L +H I+ D K +N L+ + KL DFG+A + + V + VGT+ Y
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 195
Query: 264 APEYVQ-----------TGRLAARSDVWSYGVFLYELITGRRPIDRNRPRSEQKLLQWVK 312
PE ++ +++ +SDVWS G LY + G+ P +
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ-------------- 241
Query: 313 PYLSDAKQFRQIVDPRLEGKYSLRLVSKLSHVANLCLVKNARTRPKMSEVL 363
++ + I+DP E ++ L V CL ++ + R + E+L
Sbjct: 242 -IINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.133 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,023,017
Number of Sequences: 62578
Number of extensions: 468789
Number of successful extensions: 3606
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 140
Number of HSP's that attempted gapping in prelim test: 1218
Number of HSP's gapped (non-prelim): 1107
length of query: 426
length of database: 14,973,337
effective HSP length: 102
effective length of query: 324
effective length of database: 8,590,381
effective search space: 2783283444
effective search space used: 2783283444
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)