BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014366
(426 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LZB8|AB29B_ARATH ABC transporter B family member 29, chloroplastic OS=Arabidopsis
thaliana GN=ABCB29 PE=1 SV=1
Length = 634
Score = 592 bits (1526), Expect = e-168, Method: Compositional matrix adjust.
Identities = 289/426 (67%), Positives = 365/426 (85%)
Query: 1 MATQMLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAIL 60
M M+V SP L+L+SA+VIPS+AL+IAYLG+RLRKIS+++ ++ A LS YLNEVLPAIL
Sbjct: 209 MTAHMIVASPALTLVSAMVIPSVALLIAYLGDRLRKISRKAQIASAQLSTYLNEVLPAIL 268
Query: 61 FVKANNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGALFILCGGSLLVSG 120
FVKANNAE+ ES RF+R A +DL E KK+KMK+LIPQ VQ++Y G+L I C G+++++G
Sbjct: 269 FVKANNAEISESVRFQRFARADLDERFKKKKMKSLIPQIVQVMYLGSLSIFCVGAVILAG 328
Query: 121 GSFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVS 180
S ++VSF+ SL F+I+P+Q +GKAYNE KQGEPAIERLFDLT +SKVIE+P+A+
Sbjct: 329 SSLSSSAIVSFVASLAFLIDPVQDLGKAYNELKQGEPAIERLFDLTSLESKVIERPEAIQ 388
Query: 181 LDHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYD 240
L+ + G+V+ C+ISFKY +NM VLD LNLHI+AGETVAL+GPSGGGK+TL KLLLRLY+
Sbjct: 389 LEKVAGEVELCDISFKYDENMLPVLDGLNLHIKAGETVALVGPSGGGKTTLIKLLLRLYE 448
Query: 241 PLSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHT 300
P SG I++D D+++I+L+SLR+HVGLVSQD TLFSGT+A+NIGYRDL T IDM+RVE
Sbjct: 449 PSSGSIIIDKIDIKDIKLESLRKHVGLVSQDTTLFSGTIADNIGYRDLTTGIDMKRVELA 508
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A+TANADEF+R LP+GYNT +GPRGSSLSGGQ+QRLAIARALYQ SS+LILDEATSALDS
Sbjct: 509 AKTANADEFIRNLPEGYNTGVGPRGSSLSGGQKQRLAIARALYQKSSILILDEATSALDS 568
Query: 361 RSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEELNRSTLLGSNHDSLV 420
SELLVR+A++R++ HTV+VIAH LETVMMA+RVFL++ GKL+ELNRS+LL ++ DSL
Sbjct: 569 LSELLVREALERVMQDHTVIVIAHRLETVMMAQRVFLVERGKLKELNRSSLLSTHKDSLT 628
Query: 421 SAGLVI 426
SAGLVI
Sbjct: 629 SAGLVI 634
>sp|Q2LVL0|MSBA_SYNAS Lipid A export ATP-binding/permease protein MsbA OS=Syntrophus
aciditrophicus (strain SB) GN=msbA PE=3 SV=1
Length = 601
Score = 270 bits (689), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 156/407 (38%), Positives = 243/407 (59%), Gaps = 12/407 (2%)
Query: 12 LSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKANNAEMCE 71
L++I+ +V P IA G+++R ++ ++ +++ SL+ L E + V+A E E
Sbjct: 175 LAIIAMIVFPLTIYPIAKFGQKMRSVATRTQVTMGSLTTLLQETISGTRIVRAFCMEAHE 234
Query: 72 SARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFG----ALFILCGGSLLVSGGSFDGCS 127
+ RF R + LK + AL ++ + G A I GG ++ G S G +
Sbjct: 235 NQRFARENEKLMHLALKSVSINALSSPFME--FLGGIGIAAIIFYGGYQVIKGSSTPG-T 291
Query: 128 LVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDHINGD 187
SF+T+L+ + EP++ + N +QG +R+F + ++++ +AV L I+
Sbjct: 292 FFSFLTALIMLYEPVKRLTNVNNTIQQGIAGAQRVFSIIDLVPDIVDRDEAVELPRISEK 351
Query: 188 VKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLSGCIL 247
++ NISF Y D+ P VL +NL IRAGE VA +G SGGGK+TL L+ R YD +G IL
Sbjct: 352 IEIRNISFAY-DDTP-VLRNINLTIRAGEVVAFVGMSGGGKTTLVNLIPRFYDVTAGQIL 409
Query: 248 VDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHTARTANAD 307
+D HD++++ L SLRR +G+V+Q LF+ TV NI Y + + AR ANA
Sbjct: 410 IDGHDIRDVSLISLRRQIGIVTQQTILFNDTVRNNIAYGS--QGCSEKEIIEAARAANAH 467
Query: 308 EFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSRSELLVR 367
+F+ LP+GY+T IG G+ LSGG+RQR++IARAL +N+ +LILDEATS+LD+ +E+ V+
Sbjct: 468 DFIVNLPEGYDTVIGELGTKLSGGERQRISIARALLKNAPILILDEATSSLDTEAEMEVQ 527
Query: 368 QAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKL-EELNRSTLLG 413
+A++RL+ T LVIAH L T+ A R+ +L G++ EE TLL
Sbjct: 528 EALERLMKGRTTLVIAHRLSTIRNADRIVVLVKGEIVEEGAHETLLA 574
>sp|P71082|YGAD_BACSU Putative multidrug export ATP-binding/permease protein YgaD
OS=Bacillus subtilis (strain 168) GN=ygaD PE=3 SV=2
Length = 580
Score = 249 bits (635), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 145/420 (34%), Positives = 237/420 (56%), Gaps = 16/420 (3%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
ML + L+LIS ++ P + + Y RLRK++++ ++A + +L+E + + +++
Sbjct: 157 MLTLDVKLTLISIVLFPLYGISVKYFYGRLRKLTRERSQALAQVQGHLHERIQGMPVIRS 216
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGA--LFILCGGSLLVSGGS 122
E E A+F L + ++ A V I A + I C G +++G
Sbjct: 217 FAIEDHEQAQFNEKNGHFLDKAIRHTNWNAKTFAVVNTITDLAPLIVIACAGYFVINGPL 276
Query: 123 FDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLD 182
G ++V+F+ + M P++ + + Q +++R+F+ ++ +KP+A+ D
Sbjct: 277 TVG-TMVAFVGYIDRMYNPVRRLINSSTTLTQSIASMDRVFEFIDEPYELTDKPNAIKAD 335
Query: 183 HINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPL 242
I G V+F N+SF+Y + +L ++L + GETVAL+G SGGGKSTL L+ R YD
Sbjct: 336 QIRGGVEFQNVSFQYEKDKENILHDVSLKVNRGETVALVGMSGGGKSTLVSLIPRFYDVT 395
Query: 243 SGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKID--MERVEHT 300
SG +L+D D+++ SLR VG+V QD LFS T+ ENI + K D +E +
Sbjct: 396 SGRLLIDGTDIRDYEARSLRNQVGMVLQDTFLFSETIRENIA----IGKPDATLEEIIEA 451
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A+ ANA EF+ + P+GY T +G RG LSGGQ+QR++IAR +N +LILDEATSALD
Sbjct: 452 AKAANAHEFIMSFPEGYETRVGERGVKLSGGQKQRISIARVFLKNPPLLILDEATSALDL 511
Query: 361 RSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEELNRSTLLGSNHDSLV 420
SE +++A+D+L T V+AH L T+ A ++ +++NG + E+ HD L+
Sbjct: 512 ESEHYIQEAMDKLAKDRTTFVVAHRLSTITHADKIVVMENGTIIEI-------GTHDELM 564
>sp|Q1QX69|MSBA_CHRSD Lipid A export ATP-binding/permease protein MsbA
OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC
BAA-138 / NCIMB 13768) GN=msbA PE=3 SV=1
Length = 579
Score = 249 bits (635), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 145/409 (35%), Positives = 235/409 (57%), Gaps = 11/409 (2%)
Query: 1 MATQMLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAIL 60
+ + +L + +L+LI V P + LV+ Y +R R++S++ S+ ++ +E L
Sbjct: 152 LVSYLLWTNWMLTLIFMAVTPLIGLVVNYTSKRFRRLSRRIQNSMGDVTHVASEALSGYR 211
Query: 61 FVKANNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYF----GALFILCGGSL 116
V+ + AE E ARF + + + +K KA+ +QL+ G +++ +L
Sbjct: 212 VVRTHGAEAYEKARFAEASDYNREQSMKVALTKAVSTPVIQLLVALSLAGLVWLAMSPAL 271
Query: 117 LVSGGSFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKP 176
+ S V+FIT+ M +P++ + + + ++G A + LF L + +V E
Sbjct: 272 M---ASMTPGEFVAFITAASLMAKPVRQLTEVNSTIQKGLSASQELFGLLEQPPEVDEGS 328
Query: 177 DAVSLDHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLL 236
+ I+G V+F + F+Y ++ VL ++L + GE +A++G SG GKSTL L+
Sbjct: 329 YVPA--RIDGRVRFEGVRFRYGEDQAEVLKGIDLDVPQGEMIAIVGRSGSGKSTLVSLMP 386
Query: 237 RLYDPLSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMER 296
R Y P G +L+DD D+Q L LR+ + LVSQ +TLF+ T+A NI Y D E
Sbjct: 387 RFYRPTEGRVLLDDVDIQEYALSPLRQRIALVSQQVTLFNTTIAANIAYGH--PDADREA 444
Query: 297 VEHTARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATS 356
VE AR+A A EF+ LP GY+T +G G LSGGQRQRLAIARA+++++ +L+LDEATS
Sbjct: 445 VESAARSAYAHEFIERLPNGYDTVVGDNGVMLSGGQRQRLAIARAIFKDAPLLVLDEATS 504
Query: 357 ALDSRSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEE 405
ALD+ SE ++QA++R+ T VIAH L T+ A R+ +++ G++ E
Sbjct: 505 ALDTESERYIQQALERVCRGRTTFVIAHRLSTIERADRILVMEQGEIIE 553
>sp|Q6AJW3|MSBA_DESPS Lipid A export ATP-binding/permease protein MsbA OS=Desulfotalea
psychrophila (strain LSv54 / DSM 12343) GN=msbA PE=3
SV=1
Length = 572
Score = 248 bits (634), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 140/397 (35%), Positives = 231/397 (58%), Gaps = 9/397 (2%)
Query: 12 LSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKANNAEMCE 71
L+LI L+IP A+ I G+ RK+S ++ A +S L+E + VKA E E
Sbjct: 161 LALICFLIIPLAAIPIVKFGKIFRKLSTKTQEETAEVSNMLHETISGSRIVKAFCREDYE 220
Query: 72 SARFRRLAHSDLCELLKKRKMKALIPQTVQLI--YFGALFILCGGSLLVSGGSFDGCSLV 129
RF R + +K K + +++I + A I GGS +++G + G +
Sbjct: 221 VERFHRQVETLFTITMKNAKYRVFQSPLMEIIGGFAVAGIIWVGGSEVINGSATPG-TFF 279
Query: 130 SFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDHINGDVK 189
+F+T+++ +P++ V + + +QG + +R+F + K ++ +KP+A SL ++
Sbjct: 280 AFLTAMITAYDPVKRVSQVNSTIQQGLASAQRVFAILDIKPEIEDKPEATSLAPFKESIE 339
Query: 190 FCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLSGCILVD 249
F ++SF Y +L +NL + AGE +A++GPSGGGK+TL L+ R D G I +D
Sbjct: 340 FHDVSFSYGTEK--ILSHINLKVPAGEALAIVGPSGGGKTTLTNLIPRFIDLQEGSITID 397
Query: 250 DHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGY-RDLMTKIDMERVEHTARTANADE 308
D++++ +SLR + +V+Q LF+ T+ NI Y +D T+ E + A+ A+A
Sbjct: 398 GTDIRDVTTNSLRNQIAMVTQQTILFNDTIRNNIAYGKDSCTE---EEIRRAAKAAHALT 454
Query: 309 FVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSRSELLVRQ 368
F+ LP G++T +G G+ LSGGQRQR++IARAL ++ +LILDEATSALD+ SE V++
Sbjct: 455 FIEELPNGFDTALGEGGAKLSGGQRQRISIARALLADAPILILDEATSALDTESEREVQK 514
Query: 369 AVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEE 405
A++ L+ + T VIAH L T+ A R+ ++ GK+ E
Sbjct: 515 ALENLMQNRTTFVIAHRLSTIKNASRIVVVKKGKIVE 551
>sp|Q9KQW9|MSBA_VIBCH Lipid A export ATP-binding/permease protein MsbA OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=msbA PE=1 SV=1
Length = 582
Score = 248 bits (632), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 145/407 (35%), Positives = 234/407 (57%), Gaps = 4/407 (0%)
Query: 3 TQMLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFV 62
T M S LSL+ +V P +A I+++ +R RKIS+ ++ +++ ++L V
Sbjct: 158 TLMFWNSWQLSLVLIVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVV 217
Query: 63 KANNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGALF-ILCGGSLLVSGG 121
+ + E RF ++++S + +K +++ +Q+I ALF +L S+
Sbjct: 218 LSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADPVIQMIASLALFAVLFLASVDSIRA 277
Query: 122 SFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSL 181
+ +++ ++ P++ + +EF++G A + LF L +++
Sbjct: 278 ELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLETE--RDNGKYEA 335
Query: 182 DHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDP 241
+ +NG+V +++F Y L ++ I G+TVAL+G SG GKST+A L R YD
Sbjct: 336 ERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDV 395
Query: 242 LSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHTA 301
SG I +D HDV++ +L +LRRH LVSQ++ LF+ T+A NI Y + E++E A
Sbjct: 396 DSGSICLDGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYA-AEGEYTREQIEQAA 454
Query: 302 RTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSR 361
R A+A EF+ +PQG +T IG G+SLSGGQRQR+AIARAL +++ VLILDEATSALD+
Sbjct: 455 RQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRVAIARALLRDAPVLILDEATSALDTE 514
Query: 362 SELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEELNR 408
SE ++ A+D L + TVLVIAH L T+ A + ++D G++ E R
Sbjct: 515 SERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGR 561
>sp|Q9JI39|ABCBA_MOUSE ATP-binding cassette sub-family B member 10, mitochondrial OS=Mus
musculus GN=Abcb10 PE=2 SV=1
Length = 715
Score = 245 bits (625), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 155/414 (37%), Positives = 237/414 (57%), Gaps = 22/414 (5%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M +SP L+ V+P ++++ G LRK+SK + S+A + E + I ++A
Sbjct: 272 MFFVSPSLATFVLSVVPPISVLAVIYGRYLRKLSKATQDSLAEATQLAEERIGNIRTIRA 331
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGA---------LFILCGGS 115
EM E ++ + +LL+ + +AL + +FGA L +L G
Sbjct: 332 FGKEMTEVEKY----TGRVDQLLQLAQKEAL----ARAGFFGAAGLSGNLIVLSVLYKGG 383
Query: 116 LLVSGGSFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEK 175
LL+ L SF+ ++ I G+ Y+E +G A RL++L + + ++
Sbjct: 384 LLMGSAHMTVGELSSFLMYAFWVGLSIGGLSSFYSELMKGLGAGGRLWELLERQPRLPFN 443
Query: 176 PDAVSLDH--INGDVKFCNISFKYADNMPL-VLDQLNLHIRAGETVALIGPSGGGKSTLA 232
+ + LD G ++F N+ F Y + V +L I +G AL+GPSG GKST+
Sbjct: 444 -EGMVLDEKTFQGALEFRNVHFTYPARPEVSVFQDFSLSIPSGSVTALVGPSGSGKSTVV 502
Query: 233 KLLLRLYDPLSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGY-RDLMTK 291
LLLRLYDP SG + +D HD++ + LR +G VSQ+ LFS +VAENI Y D ++
Sbjct: 503 SLLLRLYDPNSGTVSLDGHDIRQLNPVWLRSKIGTVSQEPVLFSCSVAENIAYGADNLSS 562
Query: 292 IDMERVEHTARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLIL 351
+ ++VE A ANA EF+R+ PQG++T +G +G LSGGQ+QR+AIARAL +N +L+L
Sbjct: 563 VTAQQVERAAEVANAAEFIRSFPQGFDTVVGEKGILLSGGQKQRIAIARALLKNPKILLL 622
Query: 352 DEATSALDSRSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEE 405
DEATSALD+ +E LV++A+DRL+ TVL+IAH L T+ A V +LD+GK+ E
Sbjct: 623 DEATSALDAENEHLVQEALDRLMEGRTVLIIAHRLSTIKNANFVAVLDHGKICE 676
>sp|Q9HUG8|MSBA_PSEAE Lipid A export ATP-binding/permease protein MsbA OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=msbA PE=3 SV=1
Length = 603
Score = 244 bits (622), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 145/412 (35%), Positives = 239/412 (58%), Gaps = 5/412 (1%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
+L ++ L+L+ ++P +A+++ + RK SK+ +++ ++ +E + V++
Sbjct: 176 LLWMNWKLTLVMLAILPVIAVMVTTASRKFRKQSKKIQVAMGDVTHVASETIQGYRVVRS 235
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGALFILCGGSLLVSGGSFD 124
E E RF + S+ + L+ K A+ +QL+ + A+ IL L + G +
Sbjct: 236 FGGEAYEEKRFLDASQSNTDKQLRMTKTGAVYTPMLQLVIYVAMAILMFLVLWLRGDASA 295
Query: 125 GCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDHI 184
G LV++IT+ + +PI+ + + + ++G E +F+ + E V + +
Sbjct: 296 G-DLVAYITAAGLLPKPIRQLSEVSSTVQRGVAGAESIFE--QLDEAAEEDQGTVEKERV 352
Query: 185 NGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLSG 244
+G ++ N+SF+Y VLD ++ G+ +AL+G SG GKSTLA L+ R Y G
Sbjct: 353 SGRLEVRNLSFRYPGTDKQVLDDISFIAEPGQMIALVGRSGSGKSTLANLVPRFYQHNDG 412
Query: 245 CILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHTARTA 304
IL+D +V++ RL +LRRH+ LV+Q +TLF+ +VA NI Y DL E +E A+ A
Sbjct: 413 KILLDGVEVEDYRLRNLRRHIALVTQQVTLFNDSVANNIAYGDL-AGAPREEIERAAKAA 471
Query: 305 NADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSRSEL 364
NA EF+ LPQG++T +G G LSGGQRQRLAIARAL +++ +LILDEATSALD+ SE
Sbjct: 472 NAKEFIDNLPQGFDTEVGENGVLLSGGQRQRLAIARALLKDAPLLILDEATSALDTESER 531
Query: 365 LVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKL-EELNRSTLLGSN 415
++ A+D ++ T LVIAH L T+ A + ++D G++ E + + LL N
Sbjct: 532 HIQAALDEVMKGRTTLVIAHRLSTIEKADLILVMDQGQIVERGSHAELLAQN 583
>sp|Q2YU20|Y1799_STAAB Putative multidrug export ATP-binding/permease protein SAB1799c
OS=Staphylococcus aureus (strain bovine RF122 / ET3-1)
GN=SAB1799c PE=3 SV=1
Length = 578
Score = 243 bits (620), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 224/405 (55%), Gaps = 9/405 (2%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M + L+L + + P L + RLRK++++ ++A + +L+E + I VK+
Sbjct: 156 MFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKS 215
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIY-FGALFILCGGSLLVSGGSF 123
E E+ F + + L LK + A T+ + G + ++ G+ L GS
Sbjct: 216 FAIEDNEAKNFDKKNANFLTRALKHTRWNAYSFATINTVTDIGPIIVIGVGAYLAISGSI 275
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
+L +F+ L + P++ + ++ Q +++R+F L + A ++
Sbjct: 276 TVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEI 335
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
G + +++F+Y DN +L +NL I GETVA +G SGGGKSTL L+ R YD S
Sbjct: 336 KQGRIDIYHVNFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTS 395
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLM---TKIDMERVEHT 300
G IL+D H++++ SLR +GLV QD LFS TV ENI L+ T D E VE
Sbjct: 396 GQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENI----LLGRPTATDEEVVE-V 450
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A+ ANA +F+ LPQGY+T +G RG LSGGQ+QRL+IAR N +LILDEATSALD
Sbjct: 451 AKVANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDL 510
Query: 361 RSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEE 405
SE ++++A+D L T L++AH L T+ A ++ +++NG + E
Sbjct: 511 ESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVE 555
>sp|O06967|BMRA_BACSU Multidrug resistance ABC transporter ATP-binding/permease protein
BmrA OS=Bacillus subtilis (strain 168) GN=bmrA PE=1 SV=1
Length = 589
Score = 242 bits (618), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 151/407 (37%), Positives = 238/407 (58%), Gaps = 25/407 (6%)
Query: 26 VIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKANNAEMCESARFRRLAHSDLCE 85
++ +G ++ IS+++ A + LN++LP I VKA+NAE E R ++ S L +
Sbjct: 180 ILVPIGRKMFSISRETQDETARFTGLLNQILPEIRLVKASNAEDVEYGR-GKMGISSLFK 238
Query: 86 L-LKKRKMKALIPQTVQLIYFGALFILCG-GSLLVSGGSFDGCSLVSFITSLVFMIEPIQ 143
L +++ K+++L+ + L+ AL + G G + VS G +LV+FI L +I P+
Sbjct: 239 LGVREAKVQSLVGPLISLVLMAALVAVIGYGGMQVSSGELTAGALVAFILYLFQIIMPMG 298
Query: 144 GVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDHING---DVKFCNISFKYADN 200
+ + + ++ A ER+ ++ E+ D V+ I ++ +SF Y +
Sbjct: 299 QITTFFTQLQKSIGATERMIEIL-----AEEEEDTVTGKQIENAHLPIQLDRVSFGYKPD 353
Query: 201 MPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLSGCILVDDHDVQNIRLDS 260
L+L +++ I AG+ A++GPSGGGK+TL KLL R Y P +G I + D V L+S
Sbjct: 354 Q-LILKEVSAVIEAGKVTAIVGPSGGGKTTLFKLLERFYSPTAGTIRLGDEPVDTYSLES 412
Query: 261 LRRHVGLVSQDITLFSGTVAENIGY---RDLMTKIDMERVEHTARTANADEFVRTLPQGY 317
R H+G VSQ+ L SGT+ ENI Y RD+ D E +E A A A F++ LP +
Sbjct: 413 WREHIGYVSQESPLMSGTIRENICYGLERDVT---DAE-IEKAAEMAYALNFIKELPNQF 468
Query: 318 NTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSRSELLVRQAVDRLLGHH 377
+T +G RG LSGGQRQR+AIARAL +N S+L+LDEATS+LDS+SE V+QA++ L+
Sbjct: 469 DTEVGERGIMLSGGQRQRIAIARALLRNPSILMLDEATSSLDSQSEKSVQQALEVLMEGR 528
Query: 378 TVLVIAHHLETVMMAKRVFLLDNGKLEELNRSTLLGSNHDSLVSAGL 424
T +VIAH L TV+ A ++ ++ G++ T G++H+ + S GL
Sbjct: 529 TTIVIAHRLSTVVDADQLLFVEKGEI------TGRGTHHELMASHGL 569
>sp|Q9NRK6|ABCBA_HUMAN ATP-binding cassette sub-family B member 10, mitochondrial OS=Homo
sapiens GN=ABCB10 PE=1 SV=2
Length = 738
Score = 242 bits (617), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 157/433 (36%), Positives = 240/433 (55%), Gaps = 31/433 (7%)
Query: 3 TQMLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFV 62
+ M +SP L+ V+P ++++ G LRK++K + S+A + E + + V
Sbjct: 305 SMMFFVSPNLATFVLSVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTV 364
Query: 63 KANNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGA---------LFILCG 113
+A EM E ++ S + +++ + +A + +FGA L +L
Sbjct: 365 RAFGKEMTEIEKY----ASKVDHVMQLARKEAF----ARAGFFGATGLSGNLIVLSVLYK 416
Query: 114 GSLLVSGGSFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVI 173
G LL+ L SF+ ++ I G+ Y+E +G A RL++L + + K+
Sbjct: 417 GGLLMGSAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREPKLP 476
Query: 174 EKPDAVSLDH--INGDVKFCNISFKYA--DNMPLVLDQLNLHIRAGETVALIGPSGGGKS 229
+ V L+ G ++F N+ F Y +P+ D +L I +G AL+GPSG GKS
Sbjct: 477 FN-EGVILNEKSFQGALEFKNVHFAYPARPEVPIFQD-FSLSIPSGSVTALVGPSGSGKS 534
Query: 230 TLAKLLLRLYDPLSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGY-RDL 288
T+ LLLRLYDP SG I +D HD++ + LR +G VSQ+ LFS ++AENI Y D
Sbjct: 535 TVLSLLLRLYDPASGTISLDGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADD 594
Query: 289 MTKIDMERVEHTARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSV 348
+ + E ++ A ANA F+R PQG+NT +G +G LSGGQ+QR+AIARAL +N +
Sbjct: 595 PSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVLLSGGQKQRIAIARALLKNPKI 654
Query: 349 LILDEATSALDSRSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEELNR 408
L+LDEATSALD+ +E LV++A+DRL+ TVLVIAH L T+ A V +LD GK+ E +
Sbjct: 655 LLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITEYGK 714
Query: 409 STLLGSNHDSLVS 421
H+ L+S
Sbjct: 715 -------HEELLS 720
>sp|Q2G2M9|Y2003_STAA8 Putative multidrug export ATP-binding/permease protein
SAOUHSC_02003 OS=Staphylococcus aureus (strain NCTC
8325) GN=SAOUHSC_02003 PE=3 SV=1
Length = 578
Score = 241 bits (614), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 223/405 (55%), Gaps = 9/405 (2%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M + L+L + + P L + RLRK++++ ++A + +L+E + I VK+
Sbjct: 156 MFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKS 215
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIY-FGALFILCGGSLLVSGGSF 123
E E+ F + + L LK + A + + G + ++ G+ L GS
Sbjct: 216 FAIEDNEAKNFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSI 275
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
+L +F+ L + P++ + ++ Q +++R+F L + A ++
Sbjct: 276 TVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEI 335
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
G + ++SF+Y DN +L +NL I GETVA +G SGGGKSTL L+ R YD S
Sbjct: 336 KQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTS 395
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLM---TKIDMERVEHT 300
G IL+D H++++ SLR +GLV QD LFS TV ENI L+ T D E VE
Sbjct: 396 GQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENI----LLGRPTATDEEVVE-A 450
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A+ ANA +F+ LPQGY+T +G RG LSGGQ+QRL+IAR N +LILDEATSALD
Sbjct: 451 AKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDL 510
Query: 361 RSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEE 405
SE ++++A+D L T L++AH L T+ A ++ +++NG + E
Sbjct: 511 ESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVE 555
>sp|Q6GFJ1|Y1956_STAAR Putative multidrug export ATP-binding/permease protein SAR1956
OS=Staphylococcus aureus (strain MRSA252) GN=SAR1956
PE=3 SV=1
Length = 578
Score = 241 bits (614), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 223/405 (55%), Gaps = 9/405 (2%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M + L+L + + P L + RLRK++++ ++A + +L+E + I VK+
Sbjct: 156 MFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKS 215
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIY-FGALFILCGGSLLVSGGSF 123
E E+ F + + L LK + A + + G + ++ G+ L GS
Sbjct: 216 FAIEDNEAKNFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSI 275
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
+L +F+ L + P++ + ++ Q +++R+F L + A ++
Sbjct: 276 TVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEI 335
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
G + ++SF+Y DN +L +NL I GETVA +G SGGGKSTL L+ R YD S
Sbjct: 336 KQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTS 395
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLM---TKIDMERVEHT 300
G IL+D H++++ SLR +GLV QD LFS TV ENI L+ T D E VE
Sbjct: 396 GQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENI----LLGRPTATDEEVVE-A 450
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A+ ANA +F+ LPQGY+T +G RG LSGGQ+QRL+IAR N +LILDEATSALD
Sbjct: 451 AKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDL 510
Query: 361 RSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEE 405
SE ++++A+D L T L++AH L T+ A ++ +++NG + E
Sbjct: 511 ESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVE 555
>sp|Q5HEQ8|Y1924_STAAC Putative multidrug export ATP-binding/permease protein SACOL1924
OS=Staphylococcus aureus (strain COL) GN=SACOL1924 PE=3
SV=1
Length = 578
Score = 241 bits (614), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 223/405 (55%), Gaps = 9/405 (2%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M + L+L + + P L + RLRK++++ ++A + +L+E + I VK+
Sbjct: 156 MFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKS 215
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIY-FGALFILCGGSLLVSGGSF 123
E E+ F + + L LK + A + + G + ++ G+ L GS
Sbjct: 216 FAIEDNEAKNFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSI 275
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
+L +F+ L + P++ + ++ Q +++R+F L + A ++
Sbjct: 276 TVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEI 335
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
G + ++SF+Y DN +L +NL I GETVA +G SGGGKSTL L+ R YD S
Sbjct: 336 KQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTS 395
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLM---TKIDMERVEHT 300
G IL+D H++++ SLR +GLV QD LFS TV ENI L+ T D E VE
Sbjct: 396 GQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENI----LLGRPTATDEEVVE-A 450
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A+ ANA +F+ LPQGY+T +G RG LSGGQ+QRL+IAR N +LILDEATSALD
Sbjct: 451 AKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDL 510
Query: 361 RSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEE 405
SE ++++A+D L T L++AH L T+ A ++ +++NG + E
Sbjct: 511 ESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVE 555
>sp|Q99T13|Y1866_STAAM Putative multidrug export ATP-binding/permease protein SAV1866
OS=Staphylococcus aureus (strain Mu50 / ATCC 700699)
GN=SAV1866 PE=1 SV=1
Length = 578
Score = 241 bits (614), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 223/405 (55%), Gaps = 9/405 (2%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M + L+L + + P L + RLRK++++ ++A + +L+E + I VK+
Sbjct: 156 MFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKS 215
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIY-FGALFILCGGSLLVSGGSF 123
E E+ F + + L LK + A + + G + ++ G+ L GS
Sbjct: 216 FAIEDNEAKNFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSI 275
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
+L +F+ L + P++ + ++ Q +++R+F L + A ++
Sbjct: 276 TVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEI 335
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
G + ++SF+Y DN +L +NL I GETVA +G SGGGKSTL L+ R YD S
Sbjct: 336 KQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTS 395
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLM---TKIDMERVEHT 300
G IL+D H++++ SLR +GLV QD LFS TV ENI L+ T D E VE
Sbjct: 396 GQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENI----LLGRPTATDEEVVE-A 450
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A+ ANA +F+ LPQGY+T +G RG LSGGQ+QRL+IAR N +LILDEATSALD
Sbjct: 451 AKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDL 510
Query: 361 RSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEE 405
SE ++++A+D L T L++AH L T+ A ++ +++NG + E
Sbjct: 511 ESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVE 555
>sp|Q2FFM9|Y1847_STAA3 Putative multidrug export ATP-binding/permease protein
SAUSA300_1847 OS=Staphylococcus aureus (strain USA300)
GN=SAUSA300_1847 PE=3 SV=1
Length = 578
Score = 241 bits (614), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 223/405 (55%), Gaps = 9/405 (2%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M + L+L + + P L + RLRK++++ ++A + +L+E + I VK+
Sbjct: 156 MFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKS 215
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIY-FGALFILCGGSLLVSGGSF 123
E E+ F + + L LK + A + + G + ++ G+ L GS
Sbjct: 216 FAIEDNEAKNFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSI 275
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
+L +F+ L + P++ + ++ Q +++R+F L + A ++
Sbjct: 276 TVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEI 335
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
G + ++SF+Y DN +L +NL I GETVA +G SGGGKSTL L+ R YD S
Sbjct: 336 KQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTS 395
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLM---TKIDMERVEHT 300
G IL+D H++++ SLR +GLV QD LFS TV ENI L+ T D E VE
Sbjct: 396 GQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENI----LLGRPTATDEEVVE-A 450
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A+ ANA +F+ LPQGY+T +G RG LSGGQ+QRL+IAR N +LILDEATSALD
Sbjct: 451 AKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDL 510
Query: 361 RSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEE 405
SE ++++A+D L T L++AH L T+ A ++ +++NG + E
Sbjct: 511 ESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVE 555
>sp|Q7A0J1|Y1806_STAAW Putative multidrug export ATP-binding/permease protein MW1806
OS=Staphylococcus aureus (strain MW2) GN=MW1806 PE=3
SV=1
Length = 578
Score = 241 bits (614), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 223/405 (55%), Gaps = 9/405 (2%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M + L+L + + P L + RLRK++++ ++A + +L+E + I VK+
Sbjct: 156 MFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKS 215
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIY-FGALFILCGGSLLVSGGSF 123
E E+ F + + L LK + A + + G + ++ G+ L GS
Sbjct: 216 FAIEDNEAKNFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSI 275
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
+L +F+ L + P++ + ++ Q +++R+F L + A ++
Sbjct: 276 TVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEI 335
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
G + ++SF+Y DN +L +NL I GETVA +G SGGGKSTL L+ R YD S
Sbjct: 336 KQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTS 395
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLM---TKIDMERVEHT 300
G IL+D H++++ SLR +GLV QD LFS TV ENI L+ T D E VE
Sbjct: 396 GQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENI----LLGRPTATDEEVVE-A 450
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A+ ANA +F+ LPQGY+T +G RG LSGGQ+QRL+IAR N +LILDEATSALD
Sbjct: 451 AKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDL 510
Query: 361 RSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEE 405
SE ++++A+D L T L++AH L T+ A ++ +++NG + E
Sbjct: 511 ESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVE 555
>sp|Q6G868|Y1788_STAAS Putative multidrug export ATP-binding/permease protein SAS1788
OS=Staphylococcus aureus (strain MSSA476) GN=SAS1788
PE=3 SV=1
Length = 578
Score = 241 bits (614), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 223/405 (55%), Gaps = 9/405 (2%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M + L+L + + P L + RLRK++++ ++A + +L+E + I VK+
Sbjct: 156 MFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKS 215
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIY-FGALFILCGGSLLVSGGSF 123
E E+ F + + L LK + A + + G + ++ G+ L GS
Sbjct: 216 FAIEDNEAKNFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSI 275
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
+L +F+ L + P++ + ++ Q +++R+F L + A ++
Sbjct: 276 TVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEI 335
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
G + ++SF+Y DN +L +NL I GETVA +G SGGGKSTL L+ R YD S
Sbjct: 336 KQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTS 395
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLM---TKIDMERVEHT 300
G IL+D H++++ SLR +GLV QD LFS TV ENI L+ T D E VE
Sbjct: 396 GQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENI----LLGRPTATDEEVVE-A 450
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A+ ANA +F+ LPQGY+T +G RG LSGGQ+QRL+IAR N +LILDEATSALD
Sbjct: 451 AKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDL 510
Query: 361 RSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEE 405
SE ++++A+D L T L++AH L T+ A ++ +++NG + E
Sbjct: 511 ESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVE 555
>sp|Q7A4T3|Y1683_STAAN Putative multidrug export ATP-binding/permease protein SA1683
OS=Staphylococcus aureus (strain N315) GN=SA1683 PE=1
SV=1
Length = 578
Score = 241 bits (614), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 223/405 (55%), Gaps = 9/405 (2%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M + L+L + + P L + RLRK++++ ++A + +L+E + I VK+
Sbjct: 156 MFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKS 215
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIY-FGALFILCGGSLLVSGGSF 123
E E+ F + + L LK + A + + G + ++ G+ L GS
Sbjct: 216 FAIEDNEAKNFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSI 275
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
+L +F+ L + P++ + ++ Q +++R+F L + A ++
Sbjct: 276 TVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEI 335
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
G + ++SF+Y DN +L +NL I GETVA +G SGGGKSTL L+ R YD S
Sbjct: 336 KQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTS 395
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLM---TKIDMERVEHT 300
G IL+D H++++ SLR +GLV QD LFS TV ENI L+ T D E VE
Sbjct: 396 GQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENI----LLGRPTATDEEVVE-A 450
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A+ ANA +F+ LPQGY+T +G RG LSGGQ+QRL+IAR N +LILDEATSALD
Sbjct: 451 AKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDL 510
Query: 361 RSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEE 405
SE ++++A+D L T L++AH L T+ A ++ +++NG + E
Sbjct: 511 ESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVE 555
>sp|Q5E0F2|MSBA_VIBF1 Lipid A export ATP-binding/permease protein MsbA OS=Vibrio fischeri
(strain ATCC 700601 / ES114) GN=msbA PE=3 SV=1
Length = 582
Score = 239 bits (611), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 146/410 (35%), Positives = 235/410 (57%), Gaps = 20/410 (4%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M S LSL+ ++ P +A I+ + +R RKISK ++ SL+A ++L V +
Sbjct: 160 MFWNSWQLSLVLVVIAPVVAFAISNVSKRFRKISKNMQTAMGSLTATSEQMLKGHKVVLS 219
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQ-----TVQLIY-FGALFILCGGSLLV 118
+ ES RF +++ ++++ MK ++ Q +Q+I F + +L S+
Sbjct: 220 YGGQKVESERFDNISNH-----MRQQNMKMVVAQGLANPIIQMIASFALVTVLYLASVDS 274
Query: 119 SGGSFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDA 178
+ + +++ ++ P++G+ ++F++G A + LF+L EK D
Sbjct: 275 IKETLTPGTFTVVFSAMFGLLRPLKGLTSVTSDFQRGMAACQTLFELMDMDK---EKDDG 331
Query: 179 -VSLDHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLR 237
+ D + GD+K N++F Y L ++ + AG+T+AL+G SG GKST+A L R
Sbjct: 332 TIEKDTVKGDIKVDNVTFTYPTADGPALRNVSFDLPAGKTIALVGRSGSGKSTIANLFTR 391
Query: 238 LYDPLSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGY--RDLMTKIDME 295
YD SG I +D +++ RL +LR+H LVSQ++ LF+ TVA NI Y T++++E
Sbjct: 392 FYDVDSGEISLDGDKIEDYRLPNLRKHFALVSQNVHLFNDTVANNIAYASEGKFTRLEIE 451
Query: 296 RVEHTARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEAT 355
+ A A A +F+ + G++T IG G+SLSGGQRQR+AIARAL QN+ VLILDEAT
Sbjct: 452 KA---AELAYASDFINKMDDGFDTMIGENGASLSGGQRQRIAIARALLQNAPVLILDEAT 508
Query: 356 SALDSRSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEE 405
SALD+ SE ++ A+D L TVLVIAH L T+ A ++ ++D G++ E
Sbjct: 509 SALDTESEKAIQSALDELQKDKTVLVIAHRLSTIEDADQILVVDEGEVVE 558
>sp|Q8XXB6|MSBA_RALSO Lipid A export ATP-binding/permease protein MsbA OS=Ralstonia
solanacearum (strain GMI1000) GN=msbA PE=3 SV=1
Length = 592
Score = 238 bits (606), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 144/404 (35%), Positives = 233/404 (57%), Gaps = 20/404 (4%)
Query: 12 LSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYL-NEVLPAILFVKANNAEMC 70
L+L+ A+++P + +++ + RLR ++++ H ++ + +AY+ E VK + E
Sbjct: 174 LTLVVAVILPVIGFLMSRINRRLRSLNRE-HQNLTNEAAYVVEEAAGGYKVVKLHGGEAY 232
Query: 71 ESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGALFILCGGSLL------VSGGSFD 124
ES RF + + ++ L Q + AL ++ +++ + G F
Sbjct: 233 ESRRFNAMTNRLRGYAMRMAVAGGLNQPVTQFLAALALSVILAIAMVQAQANQTTVGGFT 292
Query: 125 GCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVS-LDH 183
G F+ +++ +I P++ + ++G A E +F L IE D +D
Sbjct: 293 G-----FVMAMLLLISPLKHLTDVNQPMQRGLTAAEFIFGLI---DTPIEPQDGGKHIDR 344
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
GD++F +++F+Y + LD ++LH++AGE VAL+GPSG GK+TL LL R ++P S
Sbjct: 345 ARGDLRFEHVTFRYGPDGRAALDSIDLHVKAGEIVALVGPSGSGKTTLVNLLPRFFEPTS 404
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGY--RDLMTKIDMERVEHTA 301
G I++D + ++ L LRR + VSQD+ LF+ T+A N+ Y RD ++IDM RV
Sbjct: 405 GRIVLDGDALADLSLQDLRRQIAFVSQDVVLFNDTIAANVAYGARD-ASEIDMARVRRAL 463
Query: 302 RTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSR 361
A + V LP G +T+IG GS LSGGQRQRLAIARA+Y+++ +LILDEATSALDS
Sbjct: 464 EAAYLTDVVDNLPDGVDTNIGDNGSKLSGGQRQRLAIARAVYKDAPILILDEATSALDSE 523
Query: 362 SELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEE 405
SE V+ A++ L+ T LVIAH L T+ A R+ +L++G++ E
Sbjct: 524 SERQVQAALEALMQGRTTLVIAHRLSTIENADRIVVLEHGQIVE 567
>sp|Q5RKI8|ABCB8_RAT ATP-binding cassette sub-family B member 8, mitochondrial OS=Rattus
norvegicus GN=Abcb8 PE=2 SV=1
Length = 714
Score = 237 bits (604), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 162/428 (37%), Positives = 237/428 (55%), Gaps = 27/428 (6%)
Query: 7 VISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKANN 66
++SP L+L+ A+V P++ V +G LRK+S+Q IA + +E L ++ V+A
Sbjct: 271 ILSPRLTLMLAVVTPALMGVGTLMGSGLRKLSRQCQEQIARATGVADEALGSVRTVRAFA 330
Query: 67 AEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYF-----GALFILCGGSLLVSGG 121
E E R++ S C+ + + AL Q + I F G LFI GGSL V+G
Sbjct: 331 MEKREEERYQAELESCCCKAEELGRGIALF-QGLSNIAFNCMVLGTLFI--GGSL-VAGQ 386
Query: 122 SFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSL 181
G L+SF+ + + + + + + +G A R+F+ S VI S+
Sbjct: 387 QLKGGDLMSFLVASQTVQRSMASLSVLFGQVVRGLSAGARVFEYMSL-SPVIPLTGGYSI 445
Query: 182 --DHINGDVKFCNISFKYADNMPL-VLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRL 238
+ G + F N+SF Y VL L + G+ VAL+G SGGGK+T+A LL R
Sbjct: 446 PSKDLRGSITFQNVSFSYPCRPGFNVLKNFTLKLPPGKIVALVGQSGGGKTTVASLLERF 505
Query: 239 YDPLSGCILVDDHDVQNIRLDSLRRHV-GLVSQDITLFSGTVAENIGYRDLMTKIDM--E 295
YDP +G + +D HD++ + LR V G +SQ+ LF+ T+ ENI + K+D E
Sbjct: 506 YDPTAGVVTLDGHDLRTLDPSWLRGQVIGFISQEPVLFATTIMENIRF----GKLDASDE 561
Query: 296 RVEHTARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEAT 355
V AR ANA EF+ + P GY+T +G RG++LSGGQ+QRLAIARAL + +VLILDEAT
Sbjct: 562 EVYTAARKANAHEFISSFPDGYSTVVGERGTTLSGGQKQRLAIARALIKRPTVLILDEAT 621
Query: 356 SALDSRSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEELNRSTLLGSN 415
SALD+ SE +V++A+DR TVLVIAH L TV A + ++ NG++ E
Sbjct: 622 SALDAESERIVQEALDRASAGRTVLVIAHRLSTVRAAHSIIVMANGQVCE-------AGT 674
Query: 416 HDSLVSAG 423
H+ L+ G
Sbjct: 675 HEELLQKG 682
>sp|Q7NZU6|MSBA_CHRVO Lipid A export ATP-binding/permease protein MsbA OS=Chromobacterium
violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /
NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=msbA PE=3 SV=1
Length = 584
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 155/422 (36%), Positives = 231/422 (54%), Gaps = 16/422 (3%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
ML L+LI +V+P++ + +G+RLR +++Q+ +A ++ L E + +K
Sbjct: 159 MLTTDWQLTLICLVVMPAVTYCMRLVGQRLRGLARQNQQHMAQMTQVLAESIQCQRAIKV 218
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGALF-ILCGGSLLVSGGSF 123
+ E ARF A S +K+ A QL+ AL IL L G
Sbjct: 219 YGGQEREMARFDHTATSVRRNQVKQSAASAANTGVTQLMIACALAAILYFAGLRAQHGGL 278
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVS-LD 182
+ F+T+++ + P++ + ++G A E +F F + E D S L
Sbjct: 279 TAGDFMVFLTAMLGLFAPVKRISSVSQAMQRGLAAAESVF---AFIDEPGEPDDGASALP 335
Query: 183 HINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPL 242
G + F +SF Y + L ++L I+ GETVAL+G SG GK+TLA L+ R Y+P
Sbjct: 336 ATRGRLSFDAVSFAYPNVDSPALSGIDLEIQPGETVALVGSSGSGKTTLASLVPRFYEPS 395
Query: 243 SGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGY-RDLMTKIDMERVEHTA 301
+G +L+D + +I L LR H+ LVSQ + LF+ TVA NI Y R+ ++ E + A
Sbjct: 396 AGRLLLDGVPLADIPLRQLRGHIALVSQQVELFNDTVAANIAYGREDASR---EEIVEAA 452
Query: 302 RTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSR 361
R ANA EF+ LP G T IG G+ LSGGQRQRLAIARAL +N+ +LILDEATSALD++
Sbjct: 453 RAANAMEFIEGLPDGLETVIGENGARLSGGQRQRLAIARALLKNAPLLILDEATSALDTQ 512
Query: 362 SELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEELNRSTLLGSNHDSLVS 421
SE LV+ A++ L+ + T +VIAH L T+ A R+ ++ G+L E R H +L+
Sbjct: 513 SERLVQAALENLMKNRTTIVIAHRLSTIENADRIVVMHQGRLAEQGR-------HQALLE 565
Query: 422 AG 423
G
Sbjct: 566 QG 567
>sp|Q9PEE7|MSBA_XYLFA Lipid A export ATP-binding/permease protein MsbA OS=Xylella
fastidiosa (strain 9a5c) GN=msbA PE=3 SV=1
Length = 589
Score = 236 bits (603), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 151/411 (36%), Positives = 226/411 (54%), Gaps = 22/411 (5%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
ML S ++L LV P +A V+ + +R R+IS S A L ++ L VK
Sbjct: 164 MLWYSWTVTLAILLVAPLLAWVMQRVAKRYRRISHHIQESNAQLMQAADQALSNYQDVKV 223
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGALFILCGGSLLVSG---- 120
A+ E R+ RLA+ +L +K ++L VQL+ L +L LL++G
Sbjct: 224 YAAQESELERYARLANINLGLAIKVESTRSLSSAAVQLLGAVGLAML----LLIAGHEAL 279
Query: 121 -GSFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAV 179
G VS +TS++ +I ++ + N + G + +RLF V++ PD +
Sbjct: 280 AGRLSPGDFVSLMTSMIAVIPALKQLTNVQNMLQSGIASAQRLF-------SVLDSPDEL 332
Query: 180 S-----LDHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKL 234
L G ++F I+ +Y VLD ++ G A++G SG GKS+L KL
Sbjct: 333 DTGRRPLGRARGFIEFRGITARYPGRSAPVLDSVSFVAAPGTVTAIVGRSGSGKSSLIKL 392
Query: 235 LLRLYDPLSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDM 294
+ R Y+P SG IL+D H +Q+ L LRR + LV Q + LF G++AENI Y + M ++
Sbjct: 393 IPRFYEPESGQILLDGHPLQDYLLADLRRQIALVGQQVMLFDGSIAENIAYGE-MRQVVS 451
Query: 295 ERVEHTARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEA 354
E +E ANA +FV LP+G +G +G LSGGQRQRLAIARA+ +++ +LILDEA
Sbjct: 452 EEIERVVVDANAQDFVNQLPEGLQFQVGVKGGRLSGGQRQRLAIARAMLKDAPILILDEA 511
Query: 355 TSALDSRSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEE 405
T+ALD+ SE LV+ A+ RL+ T LVIAH L T+ A +V ++D G++ E
Sbjct: 512 TAALDNESERLVQDALQRLMPERTTLVIAHRLSTIKHADQVLVMDQGRIIE 562
>sp|Q60AA3|MSBA_METCA Lipid A export ATP-binding/permease protein MsbA OS=Methylococcus
capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath)
GN=msbA PE=3 SV=1
Length = 601
Score = 236 bits (603), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 153/410 (37%), Positives = 246/410 (60%), Gaps = 20/410 (4%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M+ +PVLSL+ ++ P + L + ++ +R R++S + S+ +S EV+ A VK
Sbjct: 165 MVYQNPVLSLVFLVLGPVLGLSVRFVSKRFRRLSMRIQESMGKVSHVTQEVIDAQRIVKV 224
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMK-----ALIPQTVQLIYF-GALFILCGGSLLV 118
N + E+A+F + +KR+MK AL + LI G IL SL
Sbjct: 225 FNGKDYEAAKFATENDRN-----QKRQMKLIATDALGGGVIHLISVAGVAGILYVVSLDS 279
Query: 119 SGGSFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLF---DLTKFKSKVIEK 175
+ SL++FI ++ M+ PI+ + + + ++G A + +F DL + + +
Sbjct: 280 VRQTITPGSLMAFIAAMAMMLSPIRRLSQVVSVMQRGIAAGDSIFAMLDLPRERDR---- 335
Query: 176 PDAVSLDHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLL 235
+SL G +++ ++S Y D +D ++L I AG+TVAL+G SG GK++L +LL
Sbjct: 336 -GRISLKRARGSIEYRHVSLVYDDRHGAAVDDVSLVIPAGKTVALVGQSGSGKTSLVRLL 394
Query: 236 LRLYDPLSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDME 295
RLY+ +G IL+D HD++ + L+SLRR + V Q++TLF+ TVA NI Y + ++ ++
Sbjct: 395 PRLYEATAGEILIDGHDIRELTLESLRRQIAYVGQEVTLFNDTVASNIAY-GCLDRVGLD 453
Query: 296 RVEHTARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEAT 355
V AR ANA +F+ TLPQG++T +G +G LSGGQRQR+AIARAL +N+ +LILDEAT
Sbjct: 454 AVREAARAANALDFIETLPQGFDTLVGQQGIVLSGGQRQRIAIARALLKNAPILILDEAT 513
Query: 356 SALDSRSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEE 405
SALD+ SE V+QA++ L+ + T LVIAH L T+ A ++ ++ G++ E
Sbjct: 514 SALDAESERYVQQALEVLMQNRTTLVIAHRLSTIQNADQICVMRGGRIIE 563
>sp|Q3KJ31|MSBA_PSEPF Lipid A export ATP-binding/permease protein MsbA OS=Pseudomonas
fluorescens (strain Pf0-1) GN=msbA PE=3 SV=1
Length = 600
Score = 234 bits (598), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 146/417 (35%), Positives = 237/417 (56%), Gaps = 11/417 (2%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
+L ++ L+L+ ++P +A+++ ++ RK SK+ L++ ++ +E + V++
Sbjct: 174 LLFMNWKLTLVMVAILPLIAVMVRTASKKFRKQSKKIQLAMGDVTHVASETIQGYRVVRS 233
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGALFILCGGSLLVSGGSFD 124
E E RF + + + L+ + A+ +QL+ + A+ IL L + G +
Sbjct: 234 FGGEAYEEKRFLDASQGNTDKQLRMTRTGAIYTPLLQLVIYSAMAILMFLVLYLRGDASA 293
Query: 125 GCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDHI 184
G +V++IT + +PI+ + + + ++G E +F+ + +V V D +
Sbjct: 294 G-DMVAYITLAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDVEPEV--DTGTVERDSV 350
Query: 185 NGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLSG 244
+G + N+SF Y VLD ++ + G+ VAL+G SG GKSTLA L+ R Y G
Sbjct: 351 SGRLDVRNLSFTYPGTERQVLDDISFSVEPGQMVALVGRSGSGKSTLANLIPRFYHHDKG 410
Query: 245 CILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHTARTA 304
IL+D +V+ +L +LRRH+ V+Q +TLFS TVA NI Y DL E +E AR A
Sbjct: 411 EILIDGVEVEQYKLLNLRRHIAQVTQHVTLFSDTVANNIAYGDL-AGAPREDIEKAARDA 469
Query: 305 NADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSRSEL 364
A +F+ LP+G +T +G G LSGGQRQRLAIARAL +N+ +LILDEATSALD+ SE
Sbjct: 470 YAMDFIAQLPEGLDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESER 529
Query: 365 LVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEELNRSTLLGSNHDSLVS 421
++ A+D+++ T LVIAH L T+ A + ++D G++ E R T HD L++
Sbjct: 530 HIQAALDQVMKGRTTLVIAHRLSTIEKADLILVMDQGRIVE--RGT-----HDDLLA 579
>sp|P45861|YWJA_BACSU Uncharacterized ABC transporter ATP-binding protein YwjA
OS=Bacillus subtilis (strain 168) GN=ywjA PE=3 SV=1
Length = 575
Score = 234 bits (597), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 144/423 (34%), Positives = 225/423 (53%), Gaps = 17/423 (4%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
ML I+ L+L++ +++P + + Y +++ K + I SA + + I V+A
Sbjct: 149 MLFINWQLALLTFIIMPIVIWLALYFNKKMTKAFTTLNKDIGDFSARVENNIGGIRLVQA 208
Query: 65 NNAEMCESARF----RRLAHSDLCELLKKRKMKALIPQTVQLIYFGALFILCGGSLLVSG 120
E E RF +R + L K ++ + L F LF+L G+ V
Sbjct: 209 FGNEAFEKERFAVNNQRFRVTKLSSYKIMAKNGSI---SYMLTRFVTLFVLLCGTWFVIR 265
Query: 121 GSFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVS 180
GS V+F+ + PI + + +G + +L + + + + PD+
Sbjct: 266 GSLSYGEFVAFVLLTNVLFRPIDKINAIIEMYPRGIAGFKSYMELMETEPDIQDSPDSKD 325
Query: 181 LDHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYD 240
+ + G++++ ++SF Y D+ VL+ +NL I+AGETVA +GPSG GKSTL LL R Y+
Sbjct: 326 VSGLKGNIRYKHVSFGYDDHHN-VLNDINLSIQAGETVAFVGPSGAGKSTLCSLLPRFYE 384
Query: 241 PLSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHT 300
G I +D ++++ L SLR +G+V QD+ LFSGT+ ENI Y L E +
Sbjct: 385 ASEGDITIDGISIKDMTLSSLRGQIGVVQQDVFLFSGTLRENIAYGRLGAS--EEDIWQA 442
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
+ A+ +E V +P G +T IG RG LSGGQ+QRL+IAR +N S+LILDEATSALD+
Sbjct: 443 VKQAHLEELVHNMPDGLDTMIGERGVKLSGGQKQRLSIARMFLKNPSILILDEATSALDT 502
Query: 361 RSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEELNRSTLLGSNHDSLV 420
+E +++A+ L T LVIAH L T+ A R+ ++ N +EE R H L+
Sbjct: 503 ETEAAIQKALQELSEGRTTLVIAHRLATIKDADRIVVVTNNGIEEQGR-------HQDLI 555
Query: 421 SAG 423
AG
Sbjct: 556 EAG 558
>sp|Q9CXJ4|ABCB8_MOUSE ATP-binding cassette sub-family B member 8, mitochondrial OS=Mus
musculus GN=Abcb8 PE=2 SV=1
Length = 717
Score = 234 bits (597), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 161/428 (37%), Positives = 237/428 (55%), Gaps = 27/428 (6%)
Query: 7 VISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKANN 66
++SP L+L+ A+V P++ V +G LRK+S+Q IA + +E L + V+A
Sbjct: 271 MLSPRLTLMLAVVTPALMGVGTLMGSGLRKLSRQCQEQIARATGVADEALGNVRTVRAFA 330
Query: 67 AEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYF-----GALFILCGGSLLVSGG 121
E E R++ S C+ + + AL Q + I F G LFI GGSL V+G
Sbjct: 331 MEKREEERYQAELESCCCKAEELGRGIALF-QGLSNIAFNCMVLGTLFI--GGSL-VAGQ 386
Query: 122 SFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSL 181
G L+SF+ + + + + + + +G A R+F+ S VI +
Sbjct: 387 QLKGGDLMSFLVASQTVQRSMASLSVLFGQVVRGLSAGARVFEYMAL-SPVIPLTGGYCI 445
Query: 182 DH--INGDVKFCNISFKYADNMPL-VLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRL 238
+ I G + F N++F Y VL L + +G+ VAL+G SGGGK+T+A LL R
Sbjct: 446 PNKDIRGSITFQNVTFSYPCRPGFNVLKDFTLKLPSGKIVALVGQSGGGKTTVASLLERF 505
Query: 239 YDPLSGCILVDDHDVQNIRLDSLRRHV-GLVSQDITLFSGTVAENIGYRDLMTKIDM--E 295
YDP +G + +D HD++ + LR V G +SQ+ LF+ T+ ENI + K+D E
Sbjct: 506 YDPEAGSVTLDGHDLRTLNPSWLRGQVIGFISQEPVLFATTIMENIRF----GKLDASDE 561
Query: 296 RVEHTARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEAT 355
V AR ANA EF+ + P GY+T +G RG++LSGGQ+QRLAIARAL + +VLILDEAT
Sbjct: 562 EVYTAAREANAHEFISSFPDGYSTVVGERGTTLSGGQKQRLAIARALIKQPTVLILDEAT 621
Query: 356 SALDSRSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEELNRSTLLGSN 415
SALD+ SE +V++A+DR TVLVIAH L TV A + ++ NG++ E
Sbjct: 622 SALDAESERVVQEALDRASAGRTVLVIAHRLSTVRAAHSIIVMANGQVCE-------AGT 674
Query: 416 HDSLVSAG 423
H+ L+ G
Sbjct: 675 HEELLKKG 682
>sp|Q3J7R8|MSBA_NITOC Lipid A export ATP-binding/permease protein MsbA OS=Nitrosococcus
oceani (strain ATCC 19707 / NCIMB 11848) GN=msbA PE=3
SV=1
Length = 597
Score = 234 bits (596), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 150/413 (36%), Positives = 236/413 (57%), Gaps = 26/413 (6%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M ++ +L+LI + P +AL+I ++ R R+IS++ S+ +S E + VK
Sbjct: 161 MAYLNGLLTLIILVTAPLIALIIWWVSHRFRRISRKIQNSMGDVSQVAQETIEGHREVKI 220
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYF----GALFILCGGSLL--V 118
+ E+ RF ++ + + +K A+ VQLI G + + S+L +
Sbjct: 221 FGGQTYEAERFDQVNEQNRRQTMKMAATDAISQPVVQLIAVLGLAGVIHLATRESMLAQI 280
Query: 119 SGGSFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDA 178
S G+F +SFIT+++ ++ P++ + K ++G A + +F L + E P+A
Sbjct: 281 SVGTF-----ISFITAMMLLLGPVKRLTKINGTLQRGIAAAQSIFGL------LAETPEA 329
Query: 179 ----VSLDHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKL 234
SL G ++F ++SF Y VL+ ++L I+ +T+AL+G SG GKSTL L
Sbjct: 330 DRGQQSLRRARGAIRFEHLSFCYEPAKGPVLENIDLEIKPYQTIALVGHSGSGKSTLVSL 389
Query: 235 LLRLYDPLSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLM--TKI 292
L R Y+ SG IL+D+ D+Q +RL LRR + LVSQ I LF+ T+A NI Y +K
Sbjct: 390 LARFYETTSGRILIDEMDIQTLRLTELRRQIALVSQQIILFNDTIAHNIAYGSYQQTSKQ 449
Query: 293 DMERVEHTARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILD 352
D+ R A A+A EF+ LP G +T IG +G LSGGQRQRLAIARAL +++ +LILD
Sbjct: 450 DIIRA---AEAAHAMEFINRLPDGLDTVIGEKGVLLSGGQRQRLAIARALLKDAPILILD 506
Query: 353 EATSALDSRSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEE 405
EAT++LD+ +E ++ A++ L+ T LVIAH L TV A ++ +L G++ E
Sbjct: 507 EATASLDTEAERHIQAALETLMRQRTTLVIAHRLSTVENADQIIVLHQGQIIE 559
>sp|Q87EF0|MSBA_XYLFT Lipid A export ATP-binding/permease protein MsbA OS=Xylella
fastidiosa (strain Temecula1 / ATCC 700964) GN=msbA PE=3
SV=1
Length = 589
Score = 234 bits (596), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 149/411 (36%), Positives = 226/411 (54%), Gaps = 22/411 (5%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
ML S ++L LV P +A V+ + +R R+IS S A L ++ L VK
Sbjct: 164 MLWYSWTVTLAILLVAPLLAWVMQRVAKRYRRISHHIQESNAQLMQAADQALSNYQDVKV 223
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGALFILCGGSLLVSG---- 120
A+ E R+ RLA+ +L +K +++ VQL+ L +L LL++G
Sbjct: 224 YAAQESELERYARLANINLGLAVKVESTRSISSAAVQLLGAVGLAML----LLIAGHEAL 279
Query: 121 -GSFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAV 179
G VS +TS++ +I ++ + N + G + +RLF V++ PD +
Sbjct: 280 AGRLSPGDFVSLMTSMIAVIPALKQLTNVQNMLQSGIASAQRLF-------SVLDSPDEL 332
Query: 180 S-----LDHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKL 234
L G ++F I+ +Y VLD ++ G A++G SG GKS+L KL
Sbjct: 333 DTGRRPLGRARGLIEFRGITARYPGRSAPVLDSVSFVAAPGTVTAIVGRSGSGKSSLIKL 392
Query: 235 LLRLYDPLSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDM 294
+ R Y+P SG IL+D H +Q+ L LRR + LV Q + LF G++A+NI Y + M ++
Sbjct: 393 IPRFYEPESGQILLDGHPLQDYLLADLRRQIALVGQQVMLFDGSIADNIAYGE-MRQVVS 451
Query: 295 ERVEHTARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEA 354
E +E ANA +FV LP+G +G +G LSGGQRQRLAIARA+ +++ +LILDEA
Sbjct: 452 EEIERVVVDANAQDFVNQLPEGLQFQVGVKGGRLSGGQRQRLAIARAMLKDAPILILDEA 511
Query: 355 TSALDSRSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEE 405
T+ALD+ SE LV+ A+ RL+ T LVIAH L T+ A +V ++D G++ E
Sbjct: 512 TAALDNESERLVQDALQRLMPERTTLVIAHRLSTIKHADQVLVMDQGRIIE 562
>sp|Q7N6C6|MSBA_PHOLL Lipid A export ATP-binding/permease protein MsbA OS=Photorhabdus
luminescens subsp. laumondii (strain TT01) GN=msbA PE=3
SV=1
Length = 581
Score = 233 bits (595), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 146/403 (36%), Positives = 224/403 (55%), Gaps = 6/403 (1%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M S LSLI ++ P ++LVI + +R R ISK S+ ++A ++L V
Sbjct: 159 MFYYSWQLSLILIVIAPIVSLVIRVVSKRFRSISKNMQNSMGQVTASAEQMLKGHKEVLI 218
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIY-FGALFILCGGSLLVSGGSF 123
+ E+ RF ++++ + +K ++ +QLI F F+L S +
Sbjct: 219 FGGQNVETERFNKVSNHMRQQGMKMVSASSISDPIIQLIASFALAFVLYAASFPDIMETL 278
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDA-VSLD 182
+ +S++ ++ P++ + +F++G A + LF + + EK D + L
Sbjct: 279 TAGKITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFSILDMEQ---EKDDGKLELK 335
Query: 183 HINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPL 242
NGD++F N++F Y L ++++I AG+ VAL+G SG GKST+A LL R YD
Sbjct: 336 KANGDIEFRNVTFCYPTKELPALQNISMYIPAGKIVALVGRSGSGKSTIANLLTRFYDVN 395
Query: 243 SGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHTAR 302
G I +D HD++ +L SLR V LVSQ++ LF+ TVA NI Y + E +E A
Sbjct: 396 EGNIFLDGHDLREYKLSSLRGQVALVSQNVHLFNDTVANNIAYAS-ENRYSREEIEKAAE 454
Query: 303 TANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSRS 362
A A +F+R L G +T IG G LSGGQRQR+AIARAL ++S VLILDEATSALD+ S
Sbjct: 455 MAYAMDFIRKLDNGLDTMIGENGVLLSGGQRQRIAIARALLRDSPVLILDEATSALDTES 514
Query: 363 ELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEE 405
E ++ A+D L + T LVIAH L T+ A + ++++G + E
Sbjct: 515 ERAIQAALDELQKNRTSLVIAHRLSTIENADEILVVEDGHIVE 557
>sp|Q4KJB2|MSBA_PSEF5 Lipid A export ATP-binding/permease protein MsbA OS=Pseudomonas
fluorescens (strain Pf-5 / ATCC BAA-477) GN=msbA PE=3
SV=1
Length = 601
Score = 233 bits (594), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 144/412 (34%), Positives = 235/412 (57%), Gaps = 5/412 (1%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
+L ++ L+L+ ++P +A+++ ++ RK SK+ +++ ++ +E + V++
Sbjct: 174 LLWMNWRLTLVMIAILPLIAVMVRTASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRS 233
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGALFILCGGSLLVSGGSFD 124
E E RF + + + L+ + A+ +QL+ + A+ +L L + G +
Sbjct: 234 FGGETYEQQRFLAASQGNTDKQLRMTRTGAIYTPLLQLVIYSAMAVLMFLVLYLRGDASA 293
Query: 125 GCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDHI 184
G +V++IT + +PI+ + + + ++G E +F+ + +V V I
Sbjct: 294 G-EMVAYITMAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDVEPEV--DRGTVERASI 350
Query: 185 NGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLSG 244
NG ++ N+SF Y VLD ++ I G+ VAL+G SG GKSTLA L+ R Y G
Sbjct: 351 NGHLEVRNLSFTYPGTERQVLDDISFSIEPGKMVALVGRSGSGKSTLANLIPRFYHHDKG 410
Query: 245 CILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHTARTA 304
IL+D +V++ RL +LRRH+ V+Q +TLFS TVA NI Y DL E +E A A
Sbjct: 411 QILLDGTEVEDFRLLNLRRHIAQVTQHVTLFSDTVANNIAYGDL-AGAPREDIEKAAADA 469
Query: 305 NADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSRSEL 364
A +F+ LP+G +T +G G LSGGQRQRLAIARAL +N+ +LILDEATSALD+ SE
Sbjct: 470 YAMDFIAQLPEGLDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESER 529
Query: 365 LVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKL-EELNRSTLLGSN 415
++ A+D+++ T LVIAH L T+ A + ++D G++ E + + LL N
Sbjct: 530 HIQAALDKVMKGRTTLVIAHRLSTIEKADLILVMDQGRIVERGSHAQLLAQN 581
>sp|P55469|Y4GM_RHISN Uncharacterized ABC transporter ATP-binding protein y4gM
OS=Rhizobium sp. (strain NGR234) GN=NGR_a03510 PE=3 SV=1
Length = 586
Score = 232 bits (592), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 147/412 (35%), Positives = 223/412 (54%), Gaps = 24/412 (5%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M++ P+LSL+SA V P L + L ++RKI + SI + + E I VKA
Sbjct: 162 MVIQQPLLSLVSAAVGPGAILGVRVLTRKVRKIMELEIASIGQIIQSVQETSTGIRIVKA 221
Query: 65 NNAEMCESARFRRLAHSDLCELLKK-----RKMKALIPQTVQLIYFG-ALFILCGGSLLV 118
E RR + ++ ++ R A P L F A I G L++
Sbjct: 222 FALEDF----MRRRMDKYIGDVERRANSIARLEAASSPIMETLSGFAIAGVIALSGVLVL 277
Query: 119 SGGSFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDA 178
G+ G L+SFIT+L+ EP + + + + + ++ L ++ EK A
Sbjct: 278 QQGNTPG-ELMSFITALLLAYEPAKRLARMRISLESALVGVRMMYQLADHPIELTEKNSA 336
Query: 179 VSLDHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRL 238
+ L G+++F +++F Y + L LN+ AG+T AL+GPSG GKS++ L++RL
Sbjct: 337 IPLPEGPGEIRFKDVNFSYKNGERL-FQNLNVTFPAGKTTALVGPSGAGKSSIINLIMRL 395
Query: 239 YDPLSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENI-----GYRDLMTKID 293
YDP G + VD HD++++ SLR +G V QD LFSGT+ NI G D
Sbjct: 396 YDPDVGSVTVDGHDLKDVTFRSLRDRIGFVGQDTFLFSGTIKYNISLGREGASD------ 449
Query: 294 MERVEHTARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDE 353
E + A+TANA +F+ +P GY+T +G G LSGGQ+QR+ IARA+ +N+ +LI DE
Sbjct: 450 -EEIIEAAKTANAHDFIMKMPHGYDTEVGENGIKLSGGQKQRITIARAMLRNAEILIFDE 508
Query: 354 ATSALDSRSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEE 405
ATSALDS SE+ +RQA+ RL T ++IAH L TV A + +++ G++ E
Sbjct: 509 ATSALDSESEIQIRQALARLTRKRTTIMIAHRLSTVTAADNIVVMEGGQVAE 560
>sp|Q080T2|MSBA_SHEFN Lipid A export ATP-binding/permease protein MsbA OS=Shewanella
frigidimarina (strain NCIMB 400) GN=msbA PE=3 SV=1
Length = 600
Score = 232 bits (592), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 142/421 (33%), Positives = 232/421 (55%), Gaps = 16/421 (3%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M S LSL ++ P M +VI+ + +R RK+SKQ ++ ++A +++ V
Sbjct: 177 MFYYSWKLSLCILVIGPIMGVVISVVSKRFRKVSKQIQSAMGGVTATTEQMIKGHKNVLV 236
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLI-YFGALFILCGGSLLVSGGSF 123
+ E RF ++ + + +K +++ + +I F F+L +
Sbjct: 237 FGGQKTEVERFFQVNDRNRYQNMKLAVAQSISQPLIMVIGSFALAFVLYAATWDSMKTDL 296
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPD--AVSL 181
+ + + +++ M++PI+ + + EF++G A +F+L +PD S+
Sbjct: 297 TAGTFAAILGAMLAMLQPIKNLTRVNAEFQRGIAACTTVFELLD----TAPEPDNGVFSI 352
Query: 182 DHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDP 241
D + G + F N++F Y L+ +N ++ G+TVAL+G SG GKST+A L+ R Y
Sbjct: 353 DRVEGKLAFDNVTFAYPGQEKSALNGINFEVKPGKTVALVGRSGSGKSTIASLITRFYGD 412
Query: 242 LS-GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHT 300
LS G I +DD + + +L SLR V LVSQ +TLF+ T+A NI Y ++ E++ H
Sbjct: 413 LSTGDIRLDDTSIYDYQLKSLRNQVALVSQQVTLFNDTIANNIAYA-YPGEVTREQIVHA 471
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A A A EF+ TLP+G +T +G G LSGGQRQR+AIARA+ +++ VLILDEATSALD+
Sbjct: 472 AELAYAMEFIDTLPEGLDTQVGENGVLLSGGQRQRIAIARAMLRDAPVLILDEATSALDT 531
Query: 361 RSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEELNRSTLLGSNHDSLV 420
SE +++ +D L + T +VIAH L T+ A + ++D GK+ E NH L+
Sbjct: 532 ESEKAIQKGLDNLRHNRTSIVIAHRLSTIESADEILVIDQGKIVERG-------NHSELI 584
Query: 421 S 421
+
Sbjct: 585 A 585
>sp|Q46Y89|MSBA_CUPPJ Lipid A export ATP-binding/permease protein MsbA OS=Cupriavidus
pinatubonensis (strain JMP134 / LMG 1197) GN=msbA PE=3
SV=1
Length = 590
Score = 231 bits (588), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 147/406 (36%), Positives = 222/406 (54%), Gaps = 24/406 (5%)
Query: 12 LSLISALVIPSMALVIAYLGERLRKISKQ---SHLSIASLSAYL-NEVLPAILFVKANNA 67
L+LI ++++P VI YL ++ + ++ H ++ + +AY+ E VK +
Sbjct: 172 LTLIVSVILP----VIGYLMSKINRRLRRLNRDHQTLTNSAAYVVEEAAGGYKVVKLHGG 227
Query: 68 EMCESARFRRLAHSDLCELLKKRKMKALI------PQTVQLIYFGALFILCGGSLLVSGG 121
E E RFR +A + LK M+ + P T L I+ + G
Sbjct: 228 EAYEMNRFRNMA-----DRLKNYSMRMAVAGGLNQPVTAFLAALALSVIITIAMIQAQGN 282
Query: 122 SFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDA-VS 180
F+ +++ +I P++ + +G A E +F L + +E D V
Sbjct: 283 QTTIGGFTGFVMAMLLLISPLKHLTDINQPLTRGLTAAELIFRLI---DEPVEPQDGGVR 339
Query: 181 LDHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYD 240
L+ GD+ F + F+Y + L+ +++ + AGE VAL+GPSG GK+TL L+ R +D
Sbjct: 340 LERAKGDLVFERVGFRYGEGTRPALEGIDIRVPAGEVVALVGPSGSGKTTLVNLVPRFFD 399
Query: 241 PLSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGY-RDLMTKIDMERVEH 299
P G IL+D H + +I L LR + VSQD+ LF+ TVA N+ Y +IDM RVE
Sbjct: 400 PTDGRILLDGHAIGDIALRELRNQIAFVSQDVVLFNDTVAANVAYGARSEEEIDMARVER 459
Query: 300 TARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALD 359
+ A E V+ LP+G NT+IG G LSGGQRQRLAIARA+Y+++ +LILDEATSALD
Sbjct: 460 ALQAAYLTEVVKNLPEGVNTNIGDNGMKLSGGQRQRLAIARAIYKDAPILILDEATSALD 519
Query: 360 SRSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEE 405
S SE V+ A++ L+ T LVIAH L T+ A R+ +LD+G++ E
Sbjct: 520 SESERQVQAALEALMVGRTTLVIAHRLSTIENADRIVVLDHGRVAE 565
>sp|Q4FS42|MSBA_PSYA2 Lipid A export ATP-binding/permease protein MsbA OS=Psychrobacter
arcticus (strain DSM 17307 / 273-4) GN=msbA PE=3 SV=1
Length = 595
Score = 230 bits (587), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 146/401 (36%), Positives = 225/401 (56%), Gaps = 16/401 (3%)
Query: 12 LSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKANNAEMCE 71
L+LI +V+P + +I +R K+SK ++ +S NEV+ VK + E
Sbjct: 183 LTLILFVVLPPILWIIRVASKRYLKLSKGIQATMGGVSHITNEVINGYQVVKNYGGQAYE 242
Query: 72 SARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGALFILCGGSLL------VSGGSFDG 125
S RF ++ +L + +K ++ VQL+ A+ ++ +L +S G F
Sbjct: 243 SKRFDEVSKKNLRQGMKIVVTNSINTPAVQLLMAVAMAVVVWLALRPAVIDDISAGQF-- 300
Query: 126 CSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDHIN 185
+S+I + + +P++ + + ++G A E +F L E+ V +
Sbjct: 301 ---ISYIAAAGLLSKPVRSLTDVNQQLQRGIAAGESIFALLDEPE---EEDTGVLSPALV 354
Query: 186 GDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLSGC 245
G++K NIS Y D+ + L NL IRAGETVAL+G SG GKS+L LL R SG
Sbjct: 355 GEIKLDNISLVYPDST-VALHDFNLDIRAGETVALVGRSGAGKSSLVNLLTRTLSTSSGQ 413
Query: 246 ILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHTARTAN 305
I +D +++I+L+SLR + +V+Q + LF+ TV NI Y L K E VE A+ A
Sbjct: 414 ITLDGMPIEDIKLESLRAQIAMVNQQVVLFNTTVFNNIAYGSLAHKTPAE-VEQAAKDAF 472
Query: 306 ADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSRSELL 365
A +F+ +P GY + IG G LSGGQRQRL+IARAL +++ +LILDEATSALD+ SE
Sbjct: 473 AHDFIMQMPNGYQSEIGAEGLQLSGGQRQRLSIARALLKDAPILILDEATSALDNESEYY 532
Query: 366 VRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEEL 406
+++A+D ++ + T LVIAH L T+ A R+ +LD G++ EL
Sbjct: 533 IQKALDNIMRNRTTLVIAHRLTTIESADRIAVLDGGRIVEL 573
>sp|Q4QPI4|MSBA_HAEI8 Lipid A export ATP-binding/permease protein MsbA OS=Haemophilus
influenzae (strain 86-028NP) GN=msbA PE=3 SV=1
Length = 587
Score = 229 bits (584), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 149/420 (35%), Positives = 238/420 (56%), Gaps = 18/420 (4%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M S L+L+ ++ P +A++I + + RK+SK S+ L+A ++L V +
Sbjct: 164 MFYTSWELTLVLFVIGPIIAVLITIVSKIFRKLSKNLQDSMGELTATTEQMLKGHKVVIS 223
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQT-----VQLIYFGALF--ILCGGSLL 117
+ E RF +++++ ++++ MK + + VQ+I AL + + L
Sbjct: 224 FGGQFVEEERFNKVSNN-----MRRKGMKMVTADSISDPVVQIIASLALVAVLFLATTPL 278
Query: 118 VSGGSFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPD 177
++ + S +S++ M+ P++ + ++F++G A + LF + + EK +
Sbjct: 279 IAEDNLSAGSFTVVFSSMLAMMRPLKSLTNVNSQFQRGMAACQTLFAILDLEP---EKDN 335
Query: 178 AV-SLDHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLL 236
+ G ++F N+SF Y L L+ ++ + AG+TVAL+G SG GKST+A L+
Sbjct: 336 GTYKAEPAKGALEFKNVSFAYQGKEELALNNISFSVPAGKTVALVGRSGSGKSTIANLVT 395
Query: 237 RLYDPLSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMER 296
R YD G IL+D ++Q+ RL +LR + +VSQ + LF+ T+A NI Y K E
Sbjct: 396 RFYDIEQGEILLDGVNIQDYRLSNLRENCAVVSQQVHLFNDTIANNIAYA-AQDKYSREE 454
Query: 297 VEHTARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATS 356
+ A+ A A EF+ LPQG++T IG G+SLSGGQRQRLAIARAL +NS VLILDEATS
Sbjct: 455 IIAAAKAAYALEFIEKLPQGFDTVIGENGASLSGGQRQRLAIARALLRNSPVLILDEATS 514
Query: 357 ALDSRSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEEL-NRSTLLGSN 415
ALD+ SE ++ A+D L TV+VIAH L T+ A + ++D+G++ E N LL N
Sbjct: 515 ALDTESERAIQSALDELKKDRTVIVIAHRLSTIENADEILVIDHGEIRERGNHKALLEQN 574
>sp|Q8EDF0|MSBA_SHEON Lipid A export ATP-binding/permease protein MsbA OS=Shewanella
oneidensis (strain MR-1) GN=msbA PE=3 SV=1
Length = 601
Score = 229 bits (584), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 146/423 (34%), Positives = 235/423 (55%), Gaps = 16/423 (3%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M S LSL ++ P M +VI + R RK+SKQ ++ +SA +++ V A
Sbjct: 178 MFYNSWKLSLCILVIGPIMGVVITIVSRRFRKVSKQIQTAMGDVSAATEQMIKGHKNVLA 237
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLI-YFGALFILCGGSLLVSGGSF 123
+ E+ARF ++ + + +K +A+ + +I F F+L SL
Sbjct: 238 FGGQETETARFAKINDRNRHQNMKLAVAQAVSQPLIMVIGSFALAFVLYAASLDSMKADL 297
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDA--VSL 181
+ + + +++ M++PI+ + + EF++G A +F+L + + D ++
Sbjct: 298 TAGTFATILGAMMAMLQPIKNLTRVNAEFQRGIAACTTVFELLD----TVPESDTGTYTV 353
Query: 182 DHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDP 241
G+++F N+SF Y L++++ + G+T+AL+G SG GKST+A L+ R Y
Sbjct: 354 ARAKGNLRFDNVSFSYEGQERRALEKIDFEVSQGQTLALVGRSGSGKSTIASLVTRFYTG 413
Query: 242 L-SGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHT 300
L SG IL+DD + + L SLR V LVSQ +TLF+ T+A NI Y ++ E++
Sbjct: 414 LESGDILLDDVSIYDYSLKSLRSQVALVSQQVTLFNDTIANNIAYA-YPGEVTREQIIEA 472
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A A+A EF+ LP G +T +G G LSGGQRQR+AIARA+ +++ VLILDEATSALD+
Sbjct: 473 ATLAHAMEFIEQLPDGLDTQVGENGVLLSGGQRQRIAIARAMLRDAPVLILDEATSALDT 532
Query: 361 RSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEELNRSTLLGSNHDSLV 420
SE ++Q +D L + T +VIAH L T+ A ++ ++D G++ E R T H SL+
Sbjct: 533 ESEKAIQQGLDNLRQNRTSVVIAHRLSTIESADQILVVDQGRIVE--RGT-----HKSLL 585
Query: 421 SAG 423
G
Sbjct: 586 ELG 588
>sp|Q0HTS8|MSBA_SHESR Lipid A export ATP-binding/permease protein MsbA OS=Shewanella sp.
(strain MR-7) GN=msbA PE=3 SV=1
Length = 601
Score = 229 bits (584), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 147/423 (34%), Positives = 234/423 (55%), Gaps = 16/423 (3%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M S LSL ++ P M LVI + R RK+SKQ ++ +SA +++ V A
Sbjct: 178 MFYNSWKLSLCILVIGPIMGLVITIVSRRFRKVSKQIQTAMGDVSAATEQMIKGHKNVLA 237
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLI-YFGALFILCGGSLLVSGGSF 123
+ E+ARF ++ + + +K +A+ + +I F F+L SL
Sbjct: 238 FGGQETETARFAKINDRNRHQNMKLAVAQAVSQPLIMVIGSFALAFVLYAASLDSMKADL 297
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDA--VSL 181
+ + + +++ M++PI+ + + EF++G A +F+L + + D ++
Sbjct: 298 TAGTFATILGAMMAMLQPIKNLTRVNAEFQRGIAACTTVFELLD----TLPESDTGTYTV 353
Query: 182 DHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDP 241
G+++F N+SF Y LD+++ + G+T+AL+G SG GKST+A L+ R Y
Sbjct: 354 KRAKGNLRFDNVSFSYEGQERRALDKIDFEVTQGQTLALVGRSGSGKSTIASLVTRFYTG 413
Query: 242 L-SGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHT 300
L SG I +DD + + L SLR V LVSQ +TLF+ T+A NI Y + E++
Sbjct: 414 LESGDIKLDDVSIYDYSLKSLRSQVALVSQQVTLFNDTIANNIAYA-YPGEATREQIIQA 472
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A A+A EF+ LP+G +T +G G LSGGQRQR+AIARA+ +++ VLILDEATSALD+
Sbjct: 473 ATLAHAMEFIEQLPEGLDTQVGENGVLLSGGQRQRIAIARAMLRDAPVLILDEATSALDT 532
Query: 361 RSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEELNRSTLLGSNHDSLV 420
SE ++Q +D L + T +VIAH L T+ A ++ ++D G++ E R T H SL+
Sbjct: 533 ESEKAIQQGLDNLRQNRTSVVIAHRLSTIESADQILVVDQGRIVE--RGT-----HKSLL 585
Query: 421 SAG 423
G
Sbjct: 586 ELG 588
>sp|Q0HHH4|MSBA_SHESM Lipid A export ATP-binding/permease protein MsbA OS=Shewanella sp.
(strain MR-4) GN=msbA PE=3 SV=1
Length = 601
Score = 229 bits (584), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 147/423 (34%), Positives = 234/423 (55%), Gaps = 16/423 (3%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M S LSL ++ P M LVI + R RK+SKQ ++ +SA +++ V A
Sbjct: 178 MFYNSWKLSLCILVIGPIMGLVITIVSRRFRKVSKQIQTAMGDVSAATEQMIKGHKNVLA 237
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLI-YFGALFILCGGSLLVSGGSF 123
+ E+ARF ++ + + +K +A+ + +I F F+L SL
Sbjct: 238 FGGQETETARFAKINDRNRHQNMKLAVAQAVSQPLIMVIGSFALAFVLYAASLDSMKADL 297
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDA--VSL 181
+ + + +++ M++PI+ + + EF++G A +F+L + + D ++
Sbjct: 298 TAGTFATILGAMMAMLQPIKNLTRVNAEFQRGIAACTTVFELLD----TLPESDTGTYTV 353
Query: 182 DHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDP 241
G+++F N+SF Y LD+++ + G+T+AL+G SG GKST+A L+ R Y
Sbjct: 354 KRAKGNLRFDNVSFSYEGQERRALDKIDFEVTQGQTLALVGRSGSGKSTIASLVTRFYTG 413
Query: 242 L-SGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHT 300
L SG I +DD + + L SLR V LVSQ +TLF+ T+A NI Y + E++
Sbjct: 414 LESGDIKLDDVSIYDYSLKSLRSQVALVSQQVTLFNDTIANNIAYA-YPGEATREQIIQA 472
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A A+A EF+ LP+G +T +G G LSGGQRQR+AIARA+ +++ VLILDEATSALD+
Sbjct: 473 ATLAHAMEFIEQLPEGLDTQVGENGVLLSGGQRQRIAIARAMLRDAPVLILDEATSALDT 532
Query: 361 RSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEELNRSTLLGSNHDSLV 420
SE ++Q +D L + T +VIAH L T+ A ++ ++D G++ E R T H SL+
Sbjct: 533 ESEKAIQQGLDNLRQNRTSVVIAHRLSTIESADQILVVDQGRIVE--RGT-----HKSLL 585
Query: 421 SAG 423
G
Sbjct: 586 ELG 588
>sp|Q54W24|ABCB4_DICDI ABC transporter B family member 4 OS=Dictyostelium discoideum
GN=abcB4 PE=3 SV=1
Length = 767
Score = 229 bits (584), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 151/419 (36%), Positives = 229/419 (54%), Gaps = 10/419 (2%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
+++ISP LSL ++P+M V + L+ +S +S + A + E + I V+A
Sbjct: 341 LILISPKLSLGMMTILPTMVSVGTFYAGWLKSLSVRSQRAQAQSTIVAEEAIGNIRTVQA 400
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGA--LFILCGGSLLVSGGS 122
+ + ES RF L L + ++ I Q V + + L + G LVS G
Sbjct: 401 FSNQHYESERFIEKNQHSLA-LSTESGVQIGIFQGVTSLALNSVSLLVYWYGGTLVSRGE 459
Query: 123 FDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLD 182
G L SFI + M + + + ++R+ +L + +I L
Sbjct: 460 MTGGQLTSFIIHTMNMQSSFSQLSILFTQIMSAMGGMQRITELIN-RVPLINSNQGFKLR 518
Query: 183 HINGDVKFCNISFKYADNMPL-VLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDP 241
+ G++KF N+ FKY + VL+ LNL ++ G+ VAL G SGGGKST+A LL R YD
Sbjct: 519 ELKGEIKFINVDFKYPTRPHVHVLNGLNLTLKPGQVVALAGSSGGGKSTIAGLLERFYDI 578
Query: 242 LSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHTA 301
+G I +D + ++ + LR +G+VSQ+ +LF+ T+ EN+ Y + D + A
Sbjct: 579 SNGDITIDGYSIKQLNAKWLRSRIGIVSQEPSLFATTILENLRYGNPNATED--EIIEAA 636
Query: 302 RTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSR 361
+ ANA +F+ P+GY T +G RG LSGGQ+QR+AIARA+ +N ++ILDEATSALDS+
Sbjct: 637 KLANAHQFISNFPKGYETIVGERGVQLSGGQKQRIAIARAILKNPQIIILDEATSALDSQ 696
Query: 362 SELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEEL-NRSTLLGSNHDSL 419
SELLV+ A+D L+ T LVIAH L TV A + +L +GK+ E N + L+ NH L
Sbjct: 697 SELLVQTALDNLMKGRTTLVIAHRLSTVQNADLIGVLSHGKIAEFGNHNELM--NHKGL 753
>sp|Q1QBW0|MSBA_PSYCK Lipid A export ATP-binding/permease protein MsbA OS=Psychrobacter
cryohalolentis (strain K5) GN=msbA PE=3 SV=1
Length = 598
Score = 229 bits (584), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 148/415 (35%), Positives = 231/415 (55%), Gaps = 24/415 (5%)
Query: 12 LSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKANNAEMCE 71
L+LI +V+P + +I +R K+SK ++ +S NEV+ VK ++ E
Sbjct: 186 LTLILFVVLPPILWLIRVASKRYLKLSKGIQETMGDVSHITNEVINGYQVVKNYGGQVYE 245
Query: 72 SARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGALFILCGGSLL------VSGGSFDG 125
S RF + +L + +K ++ VQL+ A+ ++ +L +S G F
Sbjct: 246 SKRFDVTSKKNLRQGMKVVVTNSINTPAVQLLMAMAMAVVVWLALRPAVIDDISAGQF-- 303
Query: 126 CSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPD----AVSL 181
+S+I + + +P++ + + ++G A E +F L +++P+ V
Sbjct: 304 ---ISYIAAAGLLSKPVRSLTDVNQQLQRGLAAGESIFAL-------LDEPEEADTGVLS 353
Query: 182 DHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDP 241
+ G++K N+S Y D+ + L NL IRAGETVAL+G SG GKS+L LL R
Sbjct: 354 PTLAGEIKLDNVSLVYPDST-VALHDFNLDIRAGETVALVGRSGAGKSSLVNLLTRTLTT 412
Query: 242 LSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHTA 301
SG I +D +++I+L+SLR + +V+Q + LF+ TV NI Y L K E VE A
Sbjct: 413 SSGQITLDGMPIEDIKLESLRAQIAMVNQQVVLFNTTVFNNIAYGSLAHKTPAE-VEQAA 471
Query: 302 RTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSR 361
+ A A +F+ +P GY + IG G LSGGQRQRL+IARAL +++ +LILDEATSALD+
Sbjct: 472 KDAFAHDFIMQMPNGYQSEIGAEGLQLSGGQRQRLSIARALLKDAPILILDEATSALDNE 531
Query: 362 SELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEELNRSTLLGSNH 416
SE +++A+D ++ + T LVIAH L T+ A R+ +LD G++ EL T L H
Sbjct: 532 SEYYIQKALDNIMKNRTTLVIAHRLTTIESADRIAVLDGGQIVELGTHTQLMQLH 586
>sp|Q3IGX5|MSBA_PSEHT Lipid A export ATP-binding/permease protein MsbA
OS=Pseudoalteromonas haloplanktis (strain TAC 125)
GN=msbA PE=3 SV=1
Length = 581
Score = 229 bits (583), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 142/419 (33%), Positives = 244/419 (58%), Gaps = 16/419 (3%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M S LSLI ++IP +A+++ + +R R ISK ++ ++ ++L +
Sbjct: 156 MFYTSWQLSLIFLVIIPLVAVIVTVVSKRFRHISKSIQSAMGQVTRSSEQMLSGHKVIHG 215
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGA----LFILCGGSLL--V 118
+ E +F ++ + + + +K KAL +Q++ A L+++ S++ +
Sbjct: 216 FGGQNQEIDQFSKVNNHNRQQRIKMDATKALSVSIIQVLAASAMAVILWVVSMPSMIDTI 275
Query: 119 SGGSFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDA 178
S G F V I+S++ ++ P++ + ++ ++G A + +F + +V +
Sbjct: 276 SSGDF-----VVLISSMMMLLRPLKQLANVNSDMQRGVSAAQSVFLI--LDEEVEKDTGT 328
Query: 179 VSLDHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRL 238
VS+D + G ++ N++FKY VL+ L+L I+AGE++AL+G SG GKST++ LL R
Sbjct: 329 VSVDKVKGLIEVKNVTFKYPTKDEPVLNNLSLTIKAGESIALVGRSGSGKSTISNLLPRY 388
Query: 239 YD-PLSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERV 297
YD IL+D + + +L LRR LVSQ + LF+ ++A NI Y L +I + +
Sbjct: 389 YDLEAPSEILLDGIALHDYKLTDLRRQFALVSQQVVLFNDSIANNICY-GLQREISQQEL 447
Query: 298 EHTARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSA 357
E A+ A+ EFV+ LP+ NT +G G LSGGQRQR+AIARA+ +++ +LILDEATSA
Sbjct: 448 EKVAKQAHVWEFVKDLPEQLNTMVGENGVMLSGGQRQRIAIARAILKDAPILILDEATSA 507
Query: 358 LDSRSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGK-LEELNRSTLLGSN 415
LD+ SE L++QA++ L+ T +VIAH L T+ + R++++DNG +E + +LL +N
Sbjct: 508 LDTESEKLIQQALEALMKDKTSIVIAHRLSTIENSDRIYVIDNGSVIESGDHLSLLANN 566
>sp|Q5H0H0|MSBA_XANOR Lipid A export ATP-binding/permease protein MsbA OS=Xanthomonas
oryzae pv. oryzae (strain KACC10331 / KXO85) GN=msbA
PE=3 SV=1
Length = 589
Score = 228 bits (582), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 149/428 (34%), Positives = 230/428 (53%), Gaps = 24/428 (5%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
ML S ++L ++ P +A V+ + R R+IS S A L ++ L + VK
Sbjct: 164 MLWHSWQVTLTILVLAPVLAWVMDKVARRYRRISHSIQESGAHLLQAADQTLSSHQEVKI 223
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIY---FGALFILCGGSLLVSGG 121
A+ E R+ LA +L +K + + TVQ+I AL + G L G
Sbjct: 224 YGAQQTEMERYGALADRNLRLAMKVESTRGISTATVQMIGAIGLSALLFVAGAQAL--AG 281
Query: 122 SFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPD---- 177
V +TS++ +I ++ + N ++G + ERLF V++ PD
Sbjct: 282 RLTAGDFVVLMTSMLTIIPGLKQLTNVQNMVQRGLASAERLF-------SVLDSPDEPDQ 334
Query: 178 -AVSLDHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLL 236
AV+L G ++F +++ +Y + L ++ + G A++G SG GKS+L KL+
Sbjct: 335 GAVALTRAKGLIEFRDVTARYPGQVNPALADVSFIAQPGTVTAIVGRSGSGKSSLIKLIP 394
Query: 237 RLYDPLSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMER 296
R YD +G IL+D VQ L LRR + LV Q + LF G++AEN+ + + M D +
Sbjct: 395 RFYDAEAGQILLDGQPVQAYALADLRRQIALVGQQVMLFDGSIAENVAFGE-MRSADASQ 453
Query: 297 VEHTARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATS 356
+E ANA EFV LP+G +H+G +G LSGGQRQRLAIARA+ +++ +LILDEAT+
Sbjct: 454 LERAILGANAMEFVAQLPEGLQSHVGAKGGRLSGGQRQRLAIARAMLKDAPILILDEATA 513
Query: 357 ALDSRSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEELNRSTLLGSNH 416
ALD+ SE LV+ A+ +L+ T LVIAH L T+ A +V ++D G++ E G++H
Sbjct: 514 ALDNESERLVQDALHKLMPDRTTLVIAHRLSTIEHADQVLVMDQGRIVE------RGTHH 567
Query: 417 DSLVSAGL 424
+ L GL
Sbjct: 568 ELLAQGGL 575
>sp|Q2P3E7|MSBA_XANOM Lipid A export ATP-binding/permease protein MsbA OS=Xanthomonas
oryzae pv. oryzae (strain MAFF 311018) GN=msbA PE=3 SV=1
Length = 589
Score = 228 bits (582), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 149/428 (34%), Positives = 230/428 (53%), Gaps = 24/428 (5%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
ML S ++L ++ P +A V+ + R R+IS S A L ++ L + VK
Sbjct: 164 MLWHSWQVTLTILVLAPVLAWVMDKVARRYRRISHSIQESGAHLLQAADQTLSSHQEVKI 223
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIY---FGALFILCGGSLLVSGG 121
A+ E R+ LA +L +K + + TVQ+I AL + G L G
Sbjct: 224 YGAQQTEMERYGALADRNLRLAMKVESTRGISTATVQMIGAIGLSALLFVAGAQAL--AG 281
Query: 122 SFDGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPD---- 177
V +TS++ +I ++ + N ++G + ERLF V++ PD
Sbjct: 282 RLTAGDFVVLMTSMLTIIPGLKQLTNVQNMVQRGLASAERLF-------SVLDSPDEPDQ 334
Query: 178 -AVSLDHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLL 236
AV+L G ++F +++ +Y + L ++ + G A++G SG GKS+L KL+
Sbjct: 335 GAVALTRAKGLIEFRDVTARYPGQVNPALADVSFIAQPGTVTAIVGRSGSGKSSLIKLIP 394
Query: 237 RLYDPLSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMER 296
R YD +G IL+D VQ L LRR + LV Q + LF G++AEN+ + + M D +
Sbjct: 395 RFYDAEAGQILLDGQPVQAYALADLRRQIALVGQQVMLFDGSIAENVAFGE-MRSADASQ 453
Query: 297 VEHTARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATS 356
+E ANA EFV LP+G +H+G +G LSGGQRQRLAIARA+ +++ +LILDEAT+
Sbjct: 454 LERAILGANAMEFVAQLPEGLQSHVGAKGGRLSGGQRQRLAIARAMLKDAPILILDEATA 513
Query: 357 ALDSRSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEELNRSTLLGSNH 416
ALD+ SE LV+ A+ +L+ T LVIAH L T+ A +V ++D G++ E G++H
Sbjct: 514 ALDNESERLVQDALHKLMPDRTTLVIAHRLSTIEHADQVLVMDQGRIVE------RGTHH 567
Query: 417 DSLVSAGL 424
+ L GL
Sbjct: 568 ELLAQGGL 575
>sp|Q6D437|MSBA_ERWCT Lipid A export ATP-binding/permease protein MsbA OS=Erwinia
carotovora subsp. atroseptica (strain SCRI 1043 / ATCC
BAA-672) GN=msbA PE=3 SV=2
Length = 582
Score = 228 bits (582), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 230/414 (55%), Gaps = 7/414 (1%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M S LS+I ++ P +++ + + +R R ISK ++ ++ ++L V
Sbjct: 160 MFYYSWQLSIILIVIAPIVSIAMRMVSKRFRSISKNMQDTMGHVTTSTEQMLKGHKEVLM 219
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGAL-FILCGGSLLVSGGSF 123
+ E+ RF ++++ + +K ++ +QLI AL F+L S +
Sbjct: 220 FGGQDVETKRFEQVSNRMRQQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMETL 279
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
++ +S++ ++ P++ + +F++G A + LF + + + ++
Sbjct: 280 TAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDMEQE--RDTGKREIER 337
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
G+++F ++F Y L L +NLHI G+TVAL+G SG GKST+A L+ R YD S
Sbjct: 338 AKGELEFRQVNFAYPARENLALKNINLHIPVGKTVALVGRSGSGKSTIASLITRFYDIQS 397
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGY-RDLMTKIDMERVEHTAR 302
G IL+D HD++ RL SLR V LVSQ++ LF+ T+A NI Y R+ E +E A+
Sbjct: 398 GEILLDGHDLREYRLSSLRNQVALVSQNVHLFNDTIANNIAYARN--ENYSREEIERAAK 455
Query: 303 TANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSRS 362
A A +F+ + G +T IG G LSGGQRQR+AIARAL ++S +LILDEATSALD+ S
Sbjct: 456 MAYAMDFINKMEHGLDTVIGENGVMLSGGQRQRIAIARALLRDSPILILDEATSALDTES 515
Query: 363 ELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGK-LEELNRSTLLGSN 415
E ++ A+D L T LVIAH L T+ A + ++++G+ +E N + LL +N
Sbjct: 516 ERAIQAALDELQKDRTALVIAHRLSTIEKADEILVVEDGRIIERGNHTALLATN 569
>sp|Q93FH2|LKB13_PASHA Leukotoxin translocation ATP-binding protein LktB OS=Pasteurella
haemolytica GN=lktB PE=3 SV=1
Length = 708
Score = 228 bits (580), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 147/418 (35%), Positives = 225/418 (53%), Gaps = 5/418 (1%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M SP L+L+ +P L ++ LR+ + A A+L E + AI +KA
Sbjct: 287 MWYYSPKLTLVILGSLPCYILWSIFISPILRRRLDEKFARSADNQAFLVESVTAINMIKA 346
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGALFI-LCGGSLLVSGGSF 123
+ + + S + + + + Q VQLI + I L G+ LV G
Sbjct: 347 MAVAPQMTDTWDKQLASYVSSSFRVTVLATIGQQGVQLIQKTVMVINLWLGAHLVISGDL 406
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
L++F +I P+ + + + +F+Q ++ RL D+ S + +SL
Sbjct: 407 SIGQLIAFNMLSGQVIAPVIRLAQLWQDFQQVGISVTRLGDV--LNSPTEQYQGKLSLPE 464
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
I GD+ F NI F+Y + P +L+ +NL IR GE + ++G SG GKSTL KLL R Y P +
Sbjct: 465 IKGDISFKNIRFRYKPDAPTILNNVNLEIRQGEVIGIVGRSGSGKSTLTKLLQRFYIPEN 524
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHTART 303
G +L+D HD+ + LRR +G+V QD L + ++ ENI D + MERV + A+
Sbjct: 525 GQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSD--PGMPMERVIYAAKL 582
Query: 304 ANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSRSE 363
A A +F+ L +GYNT +G +G+ LSGGQRQR+AIARAL N +LI DEATSALD SE
Sbjct: 583 AGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESE 642
Query: 364 LLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEELNRSTLLGSNHDSLVS 421
++ Q + ++ TV++IAH L TV A R+ +++ G++ E + L N + L S
Sbjct: 643 HIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVEQGKHHELLQNSNGLYS 700
>sp|Q93FH6|LKB1B_PASHA Leukotoxin translocation ATP-binding protein LktB OS=Pasteurella
haemolytica GN=lktB PE=3 SV=1
Length = 708
Score = 228 bits (580), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 147/418 (35%), Positives = 225/418 (53%), Gaps = 5/418 (1%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
M SP L+L+ +P L ++ LR+ + A A+L E + AI +KA
Sbjct: 287 MWYYSPKLTLVILGSLPCYILWSIFISPILRRRLDEKFARSADNQAFLVESVTAINMIKA 346
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGALFI-LCGGSLLVSGGSF 123
+ + + S + + + + Q VQLI + I L G+ LV G
Sbjct: 347 MAVAPQMTDTWDKQLASYVSSSFRVTVLATIGQQGVQLIQKTVMVINLWLGAHLVISGDL 406
Query: 124 DGCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDH 183
L++F +I P+ + + + +F+Q ++ RL D+ S + +SL
Sbjct: 407 SIGQLIAFNMLSGQVIAPVIRLAQLWQDFQQVGISVTRLGDV--LNSPTEQYQGKLSLPE 464
Query: 184 INGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLS 243
I GD+ F NI F+Y + P +L+ +NL IR GE + ++G SG GKSTL KLL R Y P +
Sbjct: 465 IKGDISFKNIRFRYKPDAPTILNNVNLEIRQGEVIGIVGRSGSGKSTLTKLLQRFYIPEN 524
Query: 244 GCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHTART 303
G +L+D HD+ + LRR +G+V QD L + ++ ENI D + MERV + A+
Sbjct: 525 GQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSD--PGMPMERVIYAAKL 582
Query: 304 ANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDSRSE 363
A A +F+ L +GYNT +G +G+ LSGGQRQR+AIARAL N +LI DEATSALD SE
Sbjct: 583 AGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESE 642
Query: 364 LLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEELNRSTLLGSNHDSLVS 421
++ Q + ++ TV++IAH L TV A R+ +++ G++ E + L N + L S
Sbjct: 643 HIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVEQGKHHELLQNSNGLYS 700
>sp|Q1LQD3|MSBA_RALME Lipid A export ATP-binding/permease protein MsbA OS=Ralstonia
metallidurans (strain CH34 / ATCC 43123 / DSM 2839)
GN=msbA PE=3 SV=1
Length = 594
Score = 228 bits (580), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 230/416 (55%), Gaps = 23/416 (5%)
Query: 12 LSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYL-NEVLPAILFVKANNAEMC 70
L+L+ A+++P++ V++ + RLR+++++ H ++ + +AY+ E + VK + E
Sbjct: 175 LTLVVAVLLPAIGFVMSKVNRRLRRLNRE-HQALTNTAAYVVEESVGGFKVVKLHGGEAY 233
Query: 71 ESARFRRLAHSDLCELLKKRKMKALI------PQTVQLIYFGALFILCGGSLLVSGGSFD 124
E +RF +A E L+ M+ + P T L IL + G
Sbjct: 234 EMSRFEAMA-----ERLRGYSMRMAVAGGLNQPVTAFLASLALSVILTIAMIQAQGNQTT 288
Query: 125 GCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDAVSLDHI 184
F+ +++ +I P++ + ++G A E +F L + + + L+
Sbjct: 289 IGGFTGFVMAMLLLISPLKHLADLNQPLQRGLTAAEMIFGL--IDEPIEPQNGGLPLERA 346
Query: 185 NGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYDPLSG 244
GD+ F N+ F+Y D L+ ++L GE VAL+GPSG GK+TL L+ R +DP G
Sbjct: 347 RGDLVFDNVGFRYGDAARAALNHVSLRAAPGEVVALVGPSGSGKTTLVNLVPRFFDPTEG 406
Query: 245 CILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGY----RDLMTKIDMERVEHT 300
IL+D + L LRR + VSQD+ LF+ TVA N+ Y R+ KIDM RVE
Sbjct: 407 HILLDGQPIDRFALADLRRQIAFVSQDVVLFNDTVAANVAYGVHPRE---KIDMARVERA 463
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A + V+ LP+G T+IG G LSGGQRQRLAIARA+Y+++ +LILDEATSALDS
Sbjct: 464 LAAAYLTDVVKGLPEGLETNIGDNGMKLSGGQRQRLAIARAIYKDAPILILDEATSALDS 523
Query: 361 RSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKL-EELNRSTLLGSN 415
SE V+ A++ L+ T LVIAH L T+ A R+ +L+ G++ E+ + + L+G N
Sbjct: 524 ESERQVQAALESLMVGRTTLVIAHRLSTIENADRIVVLEQGRVAEQGSHAELIGKN 579
>sp|Q5P2S7|MSBA_AROAE Lipid A export ATP-binding/permease protein MsbA OS=Aromatoleum
aromaticum (strain EbN1) GN=msbA PE=3 SV=1
Length = 601
Score = 228 bits (580), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 145/423 (34%), Positives = 246/423 (58%), Gaps = 19/423 (4%)
Query: 5 MLVISPVLSLISALVIPSMALVIAYLGERLRKISKQSHLSIASLSAYLNEVLPAILFVKA 64
+L ++ L+L+ ++P ++L++ + RK S++ +++ ++ +E + V++
Sbjct: 173 LLWMNWRLTLVMVAILPLISLMVRNASGKFRKQSRKIQVAMGDVTHVASETIQGYRVVRS 232
Query: 65 NNAEMCESARFRRLAHSDLCELLKKRKMKALIPQTVQLIYFGALFILCGGSLLVSGGSFD 124
E E RFR + + + LK K A+ T+QL+ + A+ ++ L + G +
Sbjct: 233 FGGEHYERERFRAASEDNTRKQLKMVKTSAVYTPTLQLVTYSAMAVVLFLVLRLRGEASV 292
Query: 125 GCSLVSFITSLVFMIEPIQGVGKAYNEFKQGEPAIERLFDLTKFKSKVIEKPDA----VS 180
G LV++IT+ + +PI+ + + + ++G E +F+ ++ +KP+ +
Sbjct: 293 G-DLVAYITAAGLLPKPIRQLSEVSSTIQRGVAGAESIFE------QLDDKPEVDHGRIE 345
Query: 181 LDHINGDVKFCNISFKYADNMPLVLDQLNLHIRAGETVALIGPSGGGKSTLAKLLLRLYD 240
+ ++G ++ ++SF+Y + VLD ++ + G+ +AL+G SG GKSTLA L+ R Y
Sbjct: 346 RERVSGRIEVRDLSFRYPGSDREVLDSVSFTVEPGQMIALVGRSGSGKSTLANLIPRFYH 405
Query: 241 PLSGCILVDDHDVQNIRLDSLRRHVGLVSQDITLFSGTVAENIGYRDLMTKIDMERVEHT 300
G IL+D DV++ L +LRRH+ LV+Q +TLF+ TVA NI Y DL + VE
Sbjct: 406 HDRGQILIDGVDVEDYTLKNLRRHIALVTQQVTLFNDTVANNIAYGDL-AGLPRAAVEAA 464
Query: 301 ARTANADEFVRTLPQGYNTHIGPRGSSLSGGQRQRLAIARALYQNSSVLILDEATSALDS 360
A A EF+ LPQG++T IG G +LSGGQRQRLAIARAL +N+ +LILDEATSALD+
Sbjct: 465 AEAGYAKEFIDRLPQGFDTLIGENGVTLSGGQRQRLAIARALLKNAPILILDEATSALDT 524
Query: 361 RSELLVRQAVDRLLGHHTVLVIAHHLETVMMAKRVFLLDNGKLEELNRSTLLGSNHDSLV 420
SE ++ A+ R++ T LVIAH L T+ A + ++D+G++ E +H L+
Sbjct: 525 ESERHIQAALHRVMQARTTLVIAHRLSTIEQADVIMVMDHGRIVERG-------SHAELL 577
Query: 421 SAG 423
+AG
Sbjct: 578 AAG 580
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 144,796,216
Number of Sequences: 539616
Number of extensions: 5903499
Number of successful extensions: 35411
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 3762
Number of HSP's successfully gapped in prelim test: 248
Number of HSP's that attempted gapping in prelim test: 25473
Number of HSP's gapped (non-prelim): 5380
length of query: 426
length of database: 191,569,459
effective HSP length: 120
effective length of query: 306
effective length of database: 126,815,539
effective search space: 38805554934
effective search space used: 38805554934
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)